psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 187 14 0 0 1 1 0 0 + SGN-U314166 892 690 892 C04HBa0111P03.1 147408 84537 84738 2 64,137, 690,755, 84537,84601, 1577 3 0 0 0 0 2 1294 + SGN-U314168 1611 0 1580 C04HBa0111P03.1 147408 81864 84738 3 304,142,1134, 0,304,446, 81864,83229,83604, 201 6 0 0 0 0 0 0 - SGN-U314673 814 607 814 C04HBa0111P03.1 147408 34354 34561 1 207, 0, 34354, 858 0 0 0 0 0 2 1254 - SGN-U314674 875 8 866 C04HBa0111P03.1 147408 34233 36345 3 422,286,150, 9,431,717, 34233,35820,36195, 51 0 0 0 1 3 2 583 + SGN-U316127 1577 0 54 C04HBa0111P03.1 147408 109164 109798 4 14,13,19,5, 0,14,27,49, 109164,109292,109774,109793, 46 0 0 0 0 0 2 588 - SGN-U318728 2321 2275 2321 C04HBa0111P03.1 147408 109159 109793 3 19,8,19, 0,19,27, 109159,109291,109774, 188 13 0 0 0 0 0 0 + SGN-U319830 1745 521 722 C04HBa0111P03.1 147408 80839 81040 1 201, 521, 80839, 808 2 0 0 0 0 0 0 + SGN-U319831 810 0 810 C04HBa0111P03.1 147408 80701 81511 1 810, 0, 80701, 32 1 0 0 0 0 0 0 + SGN-U320267 1270 372 405 C04HBa0111P03.1 147408 74960 74993 1 33, 372, 74960, 645 7 0 0 0 0 5 1368 - SGN-U320592 704 28 680 C04HBa0111P03.1 147408 72520 74540 6 113,240,91,77,83,48, 24,137,377,468,545,628, 72520,72634,73360,73554,74276,74492, 222 0 0 0 0 0 0 0 - SGN-U320593 274 0 222 C04HBa0111P03.1 147408 72462 72684 1 222, 52, 72462, 191 0 0 0 0 0 0 0 - SGN-U321819 1499 0 191 C04HBa0111P03.1 147408 0 191 1 191, 1308, 0, 247 7 0 0 3 22 2 14 + SGN-U321881 1040 0 276 C04HBa0111P03.1 147408 87731 87999 5 42,120,76,6,10, 0,43,174,250,266, 87731,87773,87893,87970,87989, 1002 2 0 0 1 1 2 1713 + SGN-U322509 1005 0 1005 C04HBa0111P03.1 147408 109192 111909 4 119,210,606,69, 0,120,330,936, 109192,109311,111129,111840, 2079 3 0 0 1 5 5 1392 + SGN-U324445 2087 0 2087 C04HBa0111P03.1 147408 90460 93934 6 349,13,1045,133,85,457, 0,349,367,1412,1545,1630, 90460,90810,90824,92013,92231,93477, 1168 10 0 0 0 0 2 457 - SGN-U324457 1181 0 1178 C04HBa0111P03.1 147408 124228 125863 3 427,191,560, 3,430,621, 124228,124813,125303, 1032 0 0 0 0 0 2 1529 - SGN-U324732 1032 0 1032 C04HBa0111P03.1 147408 39039 41600 3 655,75,302, 0,655,730, 39039,41098,41298, 1229 1 0 0 1 3 7 3344 + SGN-U324907 1251 0 1233 C04HBa0111P03.1 147408 99030 103604 9 12,125,82,123,54,70,34,670,60, 0,12,137,219,342,396,466,500,1173, 99030,99177,100336,100866,101076,101217,101500,102874,103544, 667 1 0 0 0 0 2 2207 + SGN-U326180 676 0 668 C04HBa0111P03.1 147408 75290 78165 3 126,171,371, 0,126,297, 75290,76681,77794, 646 6 0 0 0 0 1 2208 + SGN-U326294 661 0 652 C04HBa0111P03.1 147408 115692 118552 2 363,289, 0,363, 115692,118263, 628 1 0 0 0 0 1 691 + SGN-U327961 629 0 629 C04HBa0111P03.1 147408 113430 114750 2 558,71, 0,558, 113430,114679, 38 0 0 0 0 0 2 116 - SGN-U328144 405 367 405 C04HBa0111P03.1 147408 109164 109318 3 14,19,5, 0,14,33, 109164,109292,109313, 522 0 0 0 0 0 1 427 - SGN-U329450 537 15 537 C04HBa0111P03.1 147408 122934 123883 2 295,227, 0,295, 122934,123656, 833 9 0 0 0 0 2 1263 - SGN-U331815 842 0 842 C04HBa0111P03.1 147408 18275 20380 3 49,225,568, 0,49,274, 18275,18755,19812, 767 2 0 0 0 0 0 0 + SGN-U332617 769 0 769 C04HBa0111P03.1 147408 92648 93417 1 769, 0, 92648, 68 1 0 0 0 0 0 0 - SGN-U334267 628 559 628 C04HBa0111P03.1 147408 72524 72593 1 69, 0, 72524, 269 0 0 0 1 1 0 0 + SGN-U337157 309 32 302 C04HBa0111P03.1 147408 72446 72715 2 262,7, 32,295, 72446,72708, 425 7 0 0 1 44 2 1298 - SGN-U338938 476 0 476 C04HBa0111P03.1 147408 34596 36326 3 59,286,87, 0,59,389, 34596,35820,36239, 40 0 0 0 0 0 2 122 - SGN-U339370 305 265 305 C04HBa0111P03.1 147408 109164 109326 3 14,19,7, 0,14,33, 109164,109292,109319, 533 0 0 0 0 0 1 487 - SGN-U339510 533 0 533 C04HBa0111P03.1 147408 41697 42717 2 318,215, 0,318, 41697,42502, 724 16 0 0 0 0 2 470 - SGN-U339511 759 9 749 C04HBa0111P03.1 147408 42506 43716 3 475,94,171, 10,485,579, 42506,43366,43545, 30 0 0 0 0 0 0 0 - SGN-U340284 510 344 374 C04HBa0111P03.1 147408 127301 127331 1 30, 136, 127301, 583 0 0 0 0 0 4 610 - SGN-U341619 583 0 583 C04HBa0111P03.1 147408 118862 120055 5 34,199,126,197,27, 0,34,233,359,556, 118862,118897,119188,119754,120028, 476 1 0 0 0 0 0 0 - SGN-U342149 477 0 477 C04HBa0111P03.1 147408 38093 38570 1 477, 0, 38093, 438 1 0 0 0 0 1 148 + SGN-U342565 439 0 439 C04HBa0111P03.1 147408 13603 14190 2 207,232, 0,207, 13603,13958, 272 9 0 0 1 2 0 0 + SGN-U342574 295 12 295 C04HBa0111P03.1 147408 94996 95277 2 119,162, 12,133, 94996,95115, 174 10 0 0 0 0 0 0 - SGN-U343039 735 531 715 C04HBa0111P03.1 147408 138607 138791 1 184, 20, 138607, 515 1 0 0 0 0 0 0 - SGN-U343049 516 0 516 C04HBa0111P03.1 147408 220 736 1 516, 0, 220, 595 2 0 0 0 0 4 365 + SGN-U343820 600 0 597 C04HBa0111P03.1 147408 10407 11369 5 210,90,101,114,82, 0,210,300,401,515, 10407,10713,10886,11090,11287, 516 0 0 0 0 0 0 0 + SGN-U344677 516 0 516 C04HBa0111P03.1 147408 112847 113363 1 516, 0, 112847, 547 2 0 0 0 0 0 0 - SGN-U345555 549 0 549 C04HBa0111P03.1 147408 1132 1681 1 549, 0, 1132, 532 4 0 0 0 0 2 275 + SGN-U345667 536 0 536 C04HBa0111P03.1 147408 111982 112793 3 47,81,408, 0,47,128, 111982,112198,112385,