psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 1594 7 0 0 0 0 8 1339 - SGN-U312804 1647 29 1630 C04HBa0289C05.1 117492 46291 49231 9 305,407,50,62,161,168,162,108,178, 17,322,729,779,841,1002,1170,1332,1440, 46291,46671,47183,47314,47460,47975,48239,48762,49053, 32 1 0 0 0 0 0 0 + SGN-U313787 1294 1208 1241 C04HBa0289C05.1 117492 17466 17499 1 33, 1208, 17466, 926 1 0 0 1 23 5 4225 + SGN-U317136 962 0 950 C04HBa0289C05.1 117492 73212 78364 6 224,75,153,99,323,53, 0,224,299,452,551,897, 73212,74788,76458,77241,77965,78311, 2191 0 0 1 0 0 9 3293 + SGN-U317376 2207 0 2192 C04HBa0289C05.1 117492 67145 72630 10 212,45,635,148,177,69,90,159,225,432, 0,212,257,892,1040,1217,1286,1376,1535,1760, 67145,68115,68354,69074,69293,69687,69852,71540,71779,72198, 56 0 0 0 0 0 0 0 - SGN-U317987 1929 1873 1929 C04HBa0289C05.1 117492 53140 53196 1 56, 0, 53140, 768 2 0 0 0 0 4 2613 - SGN-U318063 827 0 770 C04HBa0289C05.1 117492 49878 53261 5 312,87,103,118,150, 57,369,456,559,677, 49878,50884,51128,51405,53111, 31 1 0 0 0 0 0 0 - SGN-U319881 832 0 32 C04HBa0289C05.1 117492 17466 17498 1 32, 800, 17466, 1475 0 0 0 0 0 5 2171 - SGN-U322190 1766 273 1748 C04HBa0289C05.1 117492 113846 117492 6 414,107,139,372,425,18, 18,432,539,678,1050,1475, 113846,114354,115213,116236,116938,117474, 1235 0 0 0 0 0 4 3321 - SGN-U322466 1235 0 1235 C04HBa0289C05.1 117492 24675 29231 5 433,206,195,252,149, 0,433,639,834,1086, 24675,25729,27000,28209,29082, 1850 1 0 0 0 0 3 1978 - SGN-U323433 1890 0 1851 C04HBa0289C05.1 117492 83830 87659 4 634,188,941,88, 39,673,861,1802, 83830,85148,85926,87571, 34 0 0 0 0 0 1 4 + SGN-U323461 944 309 343 C04HBa0289C05.1 117492 17461 17499 2 6,28, 309,315, 17461,17471, 1491 7 0 1 0 0 0 0 - SGN-U323687 1514 0 1499 C04HBa0289C05.1 117492 14236 15735 1 1499, 15, 14236, 1289 0 0 0 0 0 3 3164 - SGN-U325270 1289 0 1289 C04HBa0289C05.1 117492 7788 12241 4 226,568,310,185, 0,226,794,1104, 7788,8742,9443,12056, 547 0 0 0 2 11 3 150 - SGN-U326082 576 0 558 C04HBa0289C05.1 117492 37799 38496 5 10,7,488,26,16, 18,28,45,534,560, 37799,37818,37826,38314,38480, 843 1 0 1 0 0 2 2015 - SGN-U326112 845 0 845 C04HBa0289C05.1 117492 103168 106028 3 341,443,61, 0,341,784, 103168,104571,105967, 775 0 0 0 0 0 2 2097 - SGN-U326827 790 0 775 C04HBa0289C05.1 117492 95978 98850 3 521,194,60, 15,536,730, 95978,97110,98790, 358 0 0 0 0 0 0 0 - SGN-U327090 403 0 358 C04HBa0289C05.1 117492 24257 24615 1 358, 45, 24257, 824 1 0 0 0 0 3 651 + SGN-U327132 860 0 825 C04HBa0289C05.1 117492 111284 112760 4 69,197,466,93, 0,69,266,732, 111284,111579,112200,112667, 758 1 0 0 0 0 2 726 + SGN-U327344 759 0 759 C04HBa0289C05.1 117492 109809 111294 3 203,343,213, 0,203,546, 109809,110268,111081, 671 1 0 0 0 0 0 0 + SGN-U327732 672 0 672 C04HBa0289C05.1 117492 36899 37571 1 672, 0, 36899, 171 0 0 0 0 0 0 0 + SGN-U329494 188 0 171 C04HBa0289C05.1 117492 23609 23780 1 171, 0, 23609, 502 0 0 0 0 0 2 1597 - SGN-U330652 502 0 502 C04HBa0289C05.1 117492 38566 40665 3 160,173,169, 0,160,333, 38566,39094,40496, 734 0 0 0 0 0 3 897 + SGN-U331227 748 0 734 C04HBa0289C05.1 117492 65072 66703 4 98,153,60,423, 0,98,251,311, 65072,65295,65601,66280, 611 0 0 1 1 1 1 993 - SGN-U331237 613 0 613 C04HBa0289C05.1 117492 15837 17442 3 341,74,197, 0,341,416, 15837,17171,17245, 575 0 0 0 0 0 1 66 + SGN-U333349 575 0 575 C04HBa0289C05.1 117492 93875 94516 2 492,83, 0,492, 93875,94433, 203 4 0 0 2 8 1 78 + SGN-U336065 588 373 588 C04HBa0289C05.1 117492 69147 69432 3 66,130,11, 373,446,577, 69147,69291,69421, 596 1 0 0 0 0 1 330 - SGN-U337549 849 252 849 C04HBa0289C05.1 117492 116565 117492 2 43,554, 0,43, 116565,116938, 529 2 0 0 1 25 3 655 + SGN-U338442 556 0 556 C04HBa0289C05.1 117492 111284 112470 4 69,93,99,270, 0,69,187,286, 111284,111579,111677,112200, 707 0 0 1 0 0 5 3030 + SGN-U340364 708 0 708 C04HBa0289C05.1 117492 2826 6564 6 87,119,180,57,68,197, 0,87,206,386,443,511, 2826,3044,3935,4683,5292,6367, 545 0 0 87 0 0 0 0 - SGN-U341150 632 0 632 C04HBa0289C05.1 117492 52177 52809 1 632, 0, 52177, 789 4 0 0 1 1 1 722 + SGN-U341869 931 122 916 C04HBa0289C05.1 117492 396 1911 3 75,663,55, 122,197,861, 396,1193,1856, 423 0 0 0 0 0 1 315 + SGN-U342498 423 0 423 C04HBa0289C05.1 117492 32776 33514 2 237,186, 0,237, 32776,33328, 455 3 0 0 0 0 2 1086 + SGN-U342819 458 0 458 C04HBa0289C05.1 117492 19694 21238 3 130,27,301, 0,130,157, 19694,20097,20937, 563 2 0 0 0 0 3 1633 + SGN-U342957 565 0 565 C04HBa0289C05.1 117492 57147 59345 4 306,114,121,24, 0,306,420,541, 57147,58561,58775,59321, 308 0 0 0 0 0 1 234 + SGN-U343064 308 0 308 C04HBa0289C05.1 117492 6563 7105 2 303,5, 0,303, 6563,7100, 549 1 0 0 0 0 1 1 - SGN-U343099 561 0 550 C04HBa0289C05.1 117492 99197 99748 2 69,481, 11,80, 99197,99267, 580 0 0 0 0 0 0 0 + SGN-U346929 580 0 580 C04HBa0289C05.1 117492 36258 36838 1 580, 0, 36258, 807 0 0 0 0 0 2 643 + SGN-U347114 807 0 807 C04HBa0289C05.1 117492 61617 63067 3 127,178,502, 0,127,305, 61617,61847,62565,