##gff-version 3
##sequence-region C04HBa0107M13.1 1 116553
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match	3140	3558	0.905	-	0	ID=SGN-U344226_alignment_1;Target=SGN-U344226 1 420 +
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match_part	3140	3558	0.905	-	0	ID=GTH_SGN_U_tom_match_part_1;Target=SGN-U344226 1 420 +;Parent=SGN-U344226_alignment_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match	4869	7168	0.994	+	0	ID=SGN-U324136_alignment_1;Target=SGN-U324136 1 724 +
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match_part	4869	4931	0.952	+	0	ID=GTH_SGN_U_tom_match_part_2;Target=SGN-U324136 1 63 +;Parent=SGN-U324136_alignment_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match_part	5528	5835	1.000	+	0	ID=GTH_SGN_U_tom_match_part_3;Target=SGN-U324136 64 371 +;Parent=SGN-U324136_alignment_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match_part	5967	6163	1.000	+	0	ID=GTH_SGN_U_tom_match_part_4;Target=SGN-U324136 372 568 +;Parent=SGN-U324136_alignment_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match_part	6932	7028	0.990	+	0	ID=GTH_SGN_U_tom_match_part_5;Target=SGN-U324136 569 665 +;Parent=SGN-U324136_alignment_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match_part	7110	7168	1.000	+	0	ID=GTH_SGN_U_tom_match_part_6;Target=SGN-U324136 666 724 +;Parent=SGN-U324136_alignment_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match	4895	7131	0.995	+	0	ID=SGN-U337966_alignment_1;Target=SGN-U337966 1 631 +
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match_part	4895	4931	1.000	+	0	ID=GTH_SGN_U_tom_match_part_7;Target=SGN-U337966 1 37 +;Parent=SGN-U337966_alignment_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match_part	5528	5835	0.990	+	0	ID=GTH_SGN_U_tom_match_part_8;Target=SGN-U337966 38 345 +;Parent=SGN-U337966_alignment_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match_part	5967	6133	1.000	+	0	ID=GTH_SGN_U_tom_match_part_9;Target=SGN-U337966 346 512 +;Parent=SGN-U337966_alignment_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match_part	6932	7028	1.000	+	0	ID=GTH_SGN_U_tom_match_part_10;Target=SGN-U337966 513 609 +;Parent=SGN-U337966_alignment_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match_part	7110	7131	1.000	+	0	ID=GTH_SGN_U_tom_match_part_11;Target=SGN-U337966 610 631 +;Parent=SGN-U337966_alignment_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match	7008	8202	0.999	+	0	ID=SGN-U343404_alignment_1;Target=SGN-U343404 1 1033 +
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match_part	7008	7028	0.810	+	0	ID=GTH_SGN_U_tom_match_part_12;Target=SGN-U343404 1 21 +;Parent=SGN-U343404_alignment_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match_part	7110	7501	1.000	+	0	ID=GTH_SGN_U_tom_match_part_13;Target=SGN-U343404 22 413 +;Parent=SGN-U343404_alignment_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match_part	7583	8202	0.998	+	0	ID=GTH_SGN_U_tom_match_part_14;Target=SGN-U343404 414 1033 +;Parent=SGN-U343404_alignment_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match	8345	11578	1.000	-	0	ID=SGN-U320435_alignment_1;Target=SGN-U320435 1 1586 +
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match_part	11165	11578	1.000	-	0	ID=GTH_SGN_U_tom_match_part_15;Target=SGN-U320435 1 414 +;Parent=SGN-U320435_alignment_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match_part	10887	11055	1.000	-	0	ID=GTH_SGN_U_tom_match_part_16;Target=SGN-U320435 415 583 +;Parent=SGN-U320435_alignment_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match_part	10450	10630	1.000	-	0	ID=GTH_SGN_U_tom_match_part_17;Target=SGN-U320435 584 764 +;Parent=SGN-U320435_alignment_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match_part	10288	10371	1.000	-	0	ID=GTH_SGN_U_tom_match_part_18;Target=SGN-U320435 765 848 +;Parent=SGN-U320435_alignment_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match_part	9986	10093	1.000	-	0	ID=GTH_SGN_U_tom_match_part_19;Target=SGN-U320435 849 956 +;Parent=SGN-U320435_alignment_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match_part	8903	9172	1.000	-	0	ID=GTH_SGN_U_tom_match_part_20;Target=SGN-U320435 957 1226 +;Parent=SGN-U320435_alignment_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match_part	8345	8704	1.000	-	0	ID=GTH_SGN_U_tom_match_part_21;Target=SGN-U320435 1227 1586 +;Parent=SGN-U320435_alignment_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match	17650	17892	0.934	-	0	ID=SGN-U324767_alignment_1;Target=SGN-U324767 1 243 +
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match_part	17650	17892	0.934	-	0	ID=GTH_SGN_U_tom_match_part_22;Target=SGN-U324767 1 243 +;Parent=SGN-U324767_alignment_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match	22754	23561	0.990	-	0	ID=SGN-U345812_alignment_1;Target=SGN-U345812 1 808 +
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match_part	22754	23561	0.990	-	0	ID=GTH_SGN_U_tom_match_part_23;Target=SGN-U345812 1 808 +;Parent=SGN-U345812_alignment_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match	23572	24220	0.980	-	0	ID=SGN-U330105_alignment_1;Target=SGN-U330105 1 649 +
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match_part	23572	24220	0.980	-	0	ID=GTH_SGN_U_tom_match_part_24;Target=SGN-U330105 1 649 +;Parent=SGN-U330105_alignment_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match	39608	40085	0.958	+	0	ID=SGN-U340257_alignment_1;Target=SGN-U340257 1 479 +
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match_part	39608	40085	0.958	+	0	ID=GTH_SGN_U_tom_match_part_25;Target=SGN-U340257 1 479 +;Parent=SGN-U340257_alignment_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match	58962	61872	0.913	-	0	ID=SGN-U343276_alignment_1;Target=SGN-U343276 1 708 +
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match_part	61761	61872	0.920	-	0	ID=GTH_SGN_U_tom_match_part_26;Target=SGN-U343276 1 113 +;Parent=SGN-U343276_alignment_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match_part	61622	61646	0.680	-	0	ID=GTH_SGN_U_tom_match_part_27;Target=SGN-U343276 114 138 +;Parent=SGN-U343276_alignment_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match_part	58962	59535	0.911	-	0	ID=GTH_SGN_U_tom_match_part_28;Target=SGN-U343276 139 708 +;Parent=SGN-U343276_alignment_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match	83861	84037	0.949	+	0	ID=SGN-U345909_alignment_1;Target=SGN-U345909 1 177 +
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match_part	83861	84037	0.949	+	0	ID=GTH_SGN_U_tom_match_part_29;Target=SGN-U345909 1 177 +;Parent=SGN-U345909_alignment_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match	84743	85073	0.900	+	0	ID=SGN-U335937_alignment_1;Target=SGN-U335937 1 331 +
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match_part	84743	85073	0.900	+	0	ID=GTH_SGN_U_tom_match_part_30;Target=SGN-U335937 1 331 +;Parent=SGN-U335937_alignment_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match	84950	85508	0.925	+	0	ID=SGN-U335930_alignment_1;Target=SGN-U335930 1 559 +
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match_part	84950	85508	0.925	+	0	ID=GTH_SGN_U_tom_match_part_31;Target=SGN-U335930 1 559 +;Parent=SGN-U335930_alignment_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match	84954	86388	0.908	+	0	ID=SGN-U317064_alignment_1;Target=SGN-U317064 1 1437 +
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	match_part	84954	86388	0.908	+	0	ID=GTH_SGN_U_tom_match_part_32;Target=SGN-U317064 1 1437 +;Parent=SGN-U317064_alignment_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	gene	3140	3558	.	-	0	ID=GTH_SGN_U_tom_gene_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	mRNA	3140	3558	.	-	0	ID=GTH_SGN_U_tom_gene_1_AGS_1;Parent=GTH_SGN_U_tom_gene_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	exon	3140	3558	0.905	-	0	ID=GTH_SGN_U_tom_exon_1;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	gene	4869	8202	.	+	0	ID=GTH_SGN_U_tom_gene_2
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	mRNA	4895	8202	.	+	0	ID=GTH_SGN_U_tom_gene_2_AGS_1;Parent=GTH_SGN_U_tom_gene_2
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	exon	4895	4931	1.000	+	0	ID=GTH_SGN_U_tom_exon_2;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	exon	5528	5835	0.990	+	0	ID=GTH_SGN_U_tom_exon_3;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	exon	5967	6133	1.000	+	0	ID=GTH_SGN_U_tom_exon_4;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	exon	6932	7028	1.000	+	0	ID=GTH_SGN_U_tom_exon_5;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	exon	7110	7501	1.000	+	0	ID=GTH_SGN_U_tom_exon_6;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	exon	7583	8202	0.998	+	0	ID=GTH_SGN_U_tom_exon_7;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	mRNA	4869	8202	.	+	0	ID=GTH_SGN_U_tom_gene_2_AGS_2;Parent=GTH_SGN_U_tom_gene_2
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	exon	4869	4931	0.952	+	0	ID=GTH_SGN_U_tom_exon_8;Parent=GTH_SGN_U_tom_gene_2_AGS_2
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	exon	5528	5835	1.000	+	0	ID=GTH_SGN_U_tom_exon_9;Parent=GTH_SGN_U_tom_gene_2_AGS_2
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	exon	5967	6163	1.000	+	0	ID=GTH_SGN_U_tom_exon_10;Parent=GTH_SGN_U_tom_gene_2_AGS_2
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	exon	6932	7028	0.990	+	0	ID=GTH_SGN_U_tom_exon_11;Parent=GTH_SGN_U_tom_gene_2_AGS_2
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	exon	7110	7501	1.000	+	0	ID=GTH_SGN_U_tom_exon_12;Parent=GTH_SGN_U_tom_gene_2_AGS_2
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	exon	7583	8202	0.998	+	0	ID=GTH_SGN_U_tom_exon_13;Parent=GTH_SGN_U_tom_gene_2_AGS_2
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	gene	8345	11578	.	-	0	ID=GTH_SGN_U_tom_gene_3
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	mRNA	8345	11578	.	-	0	ID=GTH_SGN_U_tom_gene_3_AGS_1;Parent=GTH_SGN_U_tom_gene_3
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	exon	11165	11578	1.000	-	0	ID=GTH_SGN_U_tom_exon_14;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	exon	10887	11055	1.000	-	0	ID=GTH_SGN_U_tom_exon_15;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	exon	10450	10630	1.000	-	0	ID=GTH_SGN_U_tom_exon_16;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	exon	10288	10371	1.000	-	0	ID=GTH_SGN_U_tom_exon_17;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	exon	9986	10093	1.000	-	0	ID=GTH_SGN_U_tom_exon_18;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	exon	8903	9172	1.000	-	0	ID=GTH_SGN_U_tom_exon_19;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	exon	8345	8704	1.000	-	0	ID=GTH_SGN_U_tom_exon_20;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	gene	17650	17892	.	-	0	ID=GTH_SGN_U_tom_gene_4
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	mRNA	17650	17892	.	-	0	ID=GTH_SGN_U_tom_gene_4_AGS_1;Parent=GTH_SGN_U_tom_gene_4
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	exon	17650	17892	0.934	-	0	ID=GTH_SGN_U_tom_exon_21;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	gene	22754	23561	.	-	0	ID=GTH_SGN_U_tom_gene_5
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	mRNA	22754	23561	.	-	0	ID=GTH_SGN_U_tom_gene_5_AGS_1;Parent=GTH_SGN_U_tom_gene_5
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	exon	22754	23561	0.990	-	0	ID=GTH_SGN_U_tom_exon_22;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	gene	23572	24220	.	-	0	ID=GTH_SGN_U_tom_gene_6
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	mRNA	23572	24220	.	-	0	ID=GTH_SGN_U_tom_gene_6_AGS_1;Parent=GTH_SGN_U_tom_gene_6
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	exon	23572	24220	0.980	-	0	ID=GTH_SGN_U_tom_exon_23;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	gene	39608	40085	.	+	0	ID=GTH_SGN_U_tom_gene_7
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	mRNA	39608	40085	.	+	0	ID=GTH_SGN_U_tom_gene_7_AGS_1;Parent=GTH_SGN_U_tom_gene_7
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	exon	39608	40085	0.958	+	0	ID=GTH_SGN_U_tom_exon_24;Parent=GTH_SGN_U_tom_gene_7_AGS_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	gene	58962	61872	.	-	0	ID=GTH_SGN_U_tom_gene_8
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	mRNA	58962	61872	.	-	0	ID=GTH_SGN_U_tom_gene_8_AGS_1;Parent=GTH_SGN_U_tom_gene_8
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	exon	61761	61872	0.920	-	0	ID=GTH_SGN_U_tom_exon_25;Parent=GTH_SGN_U_tom_gene_8_AGS_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	exon	61622	61646	0.680	-	0	ID=GTH_SGN_U_tom_exon_26;Parent=GTH_SGN_U_tom_gene_8_AGS_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	exon	58962	59535	0.911	-	0	ID=GTH_SGN_U_tom_exon_27;Parent=GTH_SGN_U_tom_gene_8_AGS_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	gene	83861	84037	.	+	0	ID=GTH_SGN_U_tom_gene_9
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	mRNA	83861	84037	.	+	0	ID=GTH_SGN_U_tom_gene_9_AGS_1;Parent=GTH_SGN_U_tom_gene_9
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	exon	83861	84037	0.949	+	0	ID=GTH_SGN_U_tom_exon_28;Parent=GTH_SGN_U_tom_gene_9_AGS_1
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	gene	84743	86388	.	+	0	ID=GTH_SGN_U_tom_gene_10
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	mRNA	84743	86388	.	+	0	ID=GTH_SGN_U_tom_gene_10_AGS_1;Parent=GTH_SGN_U_tom_gene_10
C04HBa0107M13.1	GenomeThreader_SGN_U_tomato	exon	84743	86388	0.908	+	0	ID=GTH_SGN_U_tom_exon_29;Parent=GTH_SGN_U_tom_gene_10_AGS_1