<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-15 23:36:38"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C04HBa0223O22-gREoB/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U341232" ref_strand="+" ref_description="SGN-U341232        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | BEL1-like homeobox 4 protein (BLH4) | chr2:10114789-10120210 REVERSE | Aliases: None(evalue: 3e-13, score=73.2) genbank/nr: gi|7239157|gb|AAF43095.1| homeodomain protein [Malus x domestica](evalue: 9e-18, score=94.4)">
      <seq>cgtttctatgagaagagaattccgtcttgttcagaagcaaaattaacaatcttactctcagctaagaaagaaattagtgtgtgttgtgttggagaagaaaaagtaaaattccatgtcacacagctttcatcaacaccaaggattttacaatttctcaaatgtatatgagagatctgcaacgacgacgacgaagcatgaagatatgttaagagtacaaggctttgagccacagcaagttgaagtagcagcggcggatgttgagccgccgcctactgcaacggtttatgacgatggtggaatgttgacggagattatcagctacccatctgcgtggcggaaaaccgccacggagatattggatgatcagatccaatcgagtaattatcgatcgtggccacaaaaggagcagcagcatcttcagcagcagcagcaacttcttccacaatcaataataaacgatactgagcttcctctaatgaatcctcatattaaaccgtcatctccgcctcgctcttcatcttcacttcacatgttacttccaaactcagtagacacaaacaatcttcttcatcatcaaggatttcacttgcttaatccagcaccagtggaaactccgtctcaattcacatgggttccaggtagtagtagtggagaggacaattccgctaggattggaagggttgtggatggtcaaggtctttccttatcgctttctagaaatttcgaagctgctgcaaaattggaagacttgagaatcggaaacggtgaaatttacttgcataataatcaaggactattangtccgatgaataacaacaataatcaccatcaccatcaccaccatcaactgttacattcaggagtaattatggatcatcgtactcctcctcatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0223O22.1" temp_strand="+" temp_description="C04HBa0223O22.1  CU459025.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0223O22 sequenced_by:sanger upload_account_name:uk">
        <position start="12765" stop="14542"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13065" g_stop="13531" g_length="467"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="466" r_length="466" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13532" i_stop="13749" i_length="218">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13750" g_stop="13921" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="467" r_stop="638" r_length="172" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="13922" i_stop="13993" i_length="72">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.940" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="13994" g_stop="14242" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="639" r_stop="893" r_length="255" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0223O22.1" gen_strand="+" ref_id="SGN-U341232" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>888</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0223O22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U341232" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13065" e_stop="13531"/>
          <exon e_start="13750" e_stop="13921"/>
          <exon e_start="13994" e_stop="14242"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTTTCTATGAAAAGAGAATTCCGTCTTGTTCAGAAGCAAAATTAACAATCTTACTCTCAGCTAAGAAAGAAATTA--GTGTGTTGGGTTGGAGAAGAAAAAGTAAAATTCCATGTCACACAGCTTTCATCAACAACAAGGATTTTACAATTTCTCAAATGTATATGAGAGATCTGCAACGACGACGACGAAGCATGAAGATATGTTAAGAGTACAAGGCTTTGAGCCACAGCAAGTTGAAGTAGCAGCGGCGGATGTTGAGCCGCCGCCTACTGCAACGGTTTATGACGATGGTGGAATGTTGACGGAGATTATCAGCTACCCATCTGCGTGGCGGAAAACCGCCACGGAGATATTGGACGATCAGATCCAATCGAGTAATTATCGATCGTGGCCACAAAAGGAGCAGCAGCATCTTCAGCAGCAGCAGCAACAACTTCTTCCACAATCAATAATAAACGATACTGAGGTAATTAAATAATTGAACTGTTTAATCGTTAATTAGCTAATGATTTTGTATTATGCAGCTTGTACTCATCAAATCTCGAAGTTTGAAGTACAATTAGATTCATTTTTCGAGGAATTATCATCAATCAATCAATCACCTGGATAAGAGTCATGTACTCGGAGTTTTGTTCTTCTTTTTTTACTTATTGCTAATGAAAACTTTTGGCTATTTTCATGCAGCTTCCTCTAATGAATCCTCATATTAAACCGTCATCTCCGCCTCGCTCTTCATCTTCACTTCACATGTTACTTCCAAACTCAGTAGACACAAACAATCTTCTTCATCATCAAGGATTTCACTTGCTTAATCCAGCACCCGTGGAAACTCCGTCTCAATTCACATGGATTCCAGGTAATTAATTAATTATATTTTCAACACACCTATTACTTCTCGACGCTAATACTAAAATCATTTCTTCAACAGGTAGTAGTAGTGGAGAGGACAATTCCGCTAGGATTGGAAGGGTTGTGGATGGTCAAGGTCTTTCCTTATCGCTTTCTAGAAATTTCGAAGCTGCTGCAAAATTGGAAGACTTGAGAATCGGAAACGGTGAAATTTACTTGCATAATAATCAAGGACTATTAGGTCCGATTAATAACAACAATCATCA-C--CACCAT---CACCATCAACTGTTACATTCAGGAGTAATTATGGATCATCGTACTCCTCCTCATC</genome_strand>
        <mrna_strand>CGTTTCTATGAGAAGAGAATTCCGTCTTGTTCAGAAGCAAAATTAACAATCTTACTCTCAGCTAAGAAAGAAATTAGTGTGTGTTGTGTTGGAGAAGAAAAAGTAAAATTCCATGTCACACAGCTTTCATCAACACCAAGGATTTTACAATTTCTCAAATGTATATGAGAGATCTGCAACGACGACGACGAAGCATGAAGATATGTTAAGAGTACAAGGCTTTGAGCCACAGCAAGTTGAAGTAGCAGCGGCGGATGTTGAGCCGCCGCCTACTGCAACGGTTTATGACGATGGTGGAATGTTGACGGAGATTATCAGCTACCCATCTGCGTGGCGGAAAACCGCCACGGAGATATTGGATGATCAGATCCAATCGAGTAATTATCGATCGTGGCCACAAAAGGAGCAGCAGCATCTTCAGCAGCAGCAG---CAACTTCTTCCACAATCAATAATAAACGATACTGAG..........................................................................................................................................................................................................................CTTCCTCTAATGAATCCTCATATTAAACCGTCATCTCCGCCTCGCTCTTCATCTTCACTTCACATGTTACTTCCAAACTCAGTAGACACAAACAATCTTCTTCATCATCAAGGATTTCACTTGCTTAATCCAGCACCAGTGGAAACTCCGTCTCAATTCACATGGGTTCCAG........................................................................GTAGTAGTAGTGGAGAGGACAATTCCGCTAGGATTGGAAGGGTTGTGGATGGTCAAGGTCTTTCCTTATCGCTTTCTAGAAATTTCGAAGCTGCTGCAAAATTGGAAGACTTGAGAATCGGAAACGGTGAAATTTACTTGCATAATAATCAAGGACTATTANGTCCGATGAATAACAACAATAATCACCATCACCATCACCACCATCAACTGTTACATTCAGGAGTAATTATGGATCATCGTACTCCTCCTCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U346320" ref_strand="+" ref_description="SGN-U346320        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | BEL1-like homeobox 4 protein (BLH4) | chr2:10114789-10119903 REVERSE | Aliases: F27L4.6, F27L4_6(evalue: 6e-80, score=294) genbank/nr: gi|22652119|gb|AAN03623.1| BEL1-related homeotic protein 13 [Solanum tuberosum](evalue: 3e-85, score=310)">
      <seq>tcaaattcatgttggatacgcagcatcatcaccaagaatatcaaatgctctaagaaattcgcgatatgtaaaagctacacaagagctacttgaagaattttgctgtgtaggtaggggaaatttcaaaaatcaaagggtgaagaaattagacgatgatcaaaaccctaattccaactcggagagtgaagatcatcgtggtccctccaaagataatcatcctccattatcagctgctgagagatctgaatatcaacggaggaaaatcaagttgttatctatgctcgatgaggtagatgcaaggtacacgcgttactgtgagcaaatgcaggcgatggtgaattcattcgattcagtaatcggttacggtgcagcagctccatacacagcgttagctcagaaggcgatgtcgaggcatttccgatgtataaaggatgcgattgttggtcaattgaaacagacttgtaagtatttgggggagaaagatgtgacgggaacgagtgggttaacaaaaggggaaacaccgaggttgaaaatgcttgatcagaaattgaggcaacaaaaggcattacatcaaatgggaatgttggattctgatgcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0223O22.1" temp_strand="+" temp_description="C04HBa0223O22.1  CU459025.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0223O22 sequenced_by:sanger upload_account_name:uk">
        <position start="13983" stop="15951"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14283" g_stop="14571" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="289" r_length="289" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14572" i_stop="15340" i_length="769">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15341" g_stop="15651" g_length="311"/>
          <reference_exon_boundary r_type="cDNA" r_start="290" r_stop="600" r_length="311" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0223O22.1" gen_strand="+" ref_id="SGN-U346320" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>600</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0223O22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U346320" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14283" e_stop="14571"/>
          <exon e_start="15341" e_stop="15651"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAATTCATGTTGGATACGCAGCATCATCACCAAGAATATCAAATGCTCTAAGAAATTCGCGATATGTAAAAGCTACACAAGAGCTACTTGAAGAATTTTGCTGTGTAGGTAGGGGAAATTTCAAAAATCAAAGGGTGAAGAAATTAGACGATGATCAAAACCCTAATTCCAACTCGGAGAGTGAAGATCATCGTGGTCCCTCCAAAGATAATCATCCTCCATTATCAGCTGCTGAGAGATCTGAATATCAACGGAGGAAAATCAAGTTGTTATCTATGCTCGATGAGGCATGTCGTAGTAACTTACTTCCTTTAATCTCTCTTTCTCTATAATTATCAAGTAAAACGTCAAAACTTAGCTTGTTAAAAGGTCCATTTTTTTTTCATAATTATCAAAAGCTGATTACCTAATTACAATAGTCATTAACAACTAATAGTGACATTATTAGAATATTTAATATGGTACACTACAGTACTACCTTATACCTTTCATTATTAGTAAGATTTAATTAGTGTTTCACTTTTTAAAGAAGAGCTACATGTCGAATAACAAACGACATGCCTCCATTATAGGTTGTAGTTTAGCATTAAGGAAGCTAATACGAAAATTAATCTCTCTAATTAAAATAACTAATTCATTCCACAAAAGAAGCAAATGATTTATCATCTGGTACAGTTGGGGACCATTTCTCTTTTCTTCCTGATTCGATGATTCGAGGGTCTTTTTTAAATCATCAATTATTGATACTAAGCCGCGTTTATTAATCTTTGTTTAGTTGAAATTTTATTTTTGTTAACAACTCACTCAATTGCTCCCCACGTTCATTAATTCCTATTGCAGTATAGTACTAAGGAAGATGTCAGGCAGAGTGATTAATTTTATACATAAAAAGCAAATCTGATGATCTGATGAACGGTATTTGTTTAATTTGTGCTGGAAAAGCACAGCACAAAAATGCTTCGTGCTACGCATATTCCATCATGCACACCATGTGTTTGATATAAAAAATTAAATTAAATTAAATTAGAACTCTTTTTTTCTTCTTCACCGTTCCAGGTAGATGCAAGGTACACGCGTTACTGTGAGCAAATGCAGGCGATGGTGAATTCATTCGATTCAGTAATCGGTTACGGTGCAGCAGCTCCATACACAGCGTTAGCTCAGAAGGCGATGTCGAGGCATTTCCGATGTATAAAGGATGCGATTGTTGGTCAATTGAAACAGACTTGTAAGTATTTGGGGGAGAAAGATGTGACGGGAACGAGTGGGTTAACAAAAGGGGAAACACCGAGGTTGAAAATGCTTGATCAGAAATTGAGGCAACAAAAGGCATTACATCAAATGGGAATGTTGGATTCTGATGCTTG</genome_strand>
        <mrna_strand>TCAAATTCATGTTGGATACGCAGCATCATCACCAAGAATATCAAATGCTCTAAGAAATTCGCGATATGTAAAAGCTACACAAGAGCTACTTGAAGAATTTTGCTGTGTAGGTAGGGGAAATTTCAAAAATCAAAGGGTGAAGAAATTAGACGATGATCAAAACCCTAATTCCAACTCGGAGAGTGAAGATCATCGTGGTCCCTCCAAAGATAATCATCCTCCATTATCAGCTGCTGAGAGATCTGAATATCAACGGAGGAAAATCAAGTTGTTATCTATGCTCGATGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGATGCAAGGTACACGCGTTACTGTGAGCAAATGCAGGCGATGGTGAATTCATTCGATTCAGTAATCGGTTACGGTGCAGCAGCTCCATACACAGCGTTAGCTCAGAAGGCGATGTCGAGGCATTTCCGATGTATAAAGGATGCGATTGTTGGTCAATTGAAACAGACTTGTAAGTATTTGGGGGAGAAAGATGTGACGGGAACGAGTGGGTTAACAAAAGGGGAAACACCGAGGTTGAAAATGCTTGATCAGAAATTGAGGCAACAAAAGGCATTACATCAAATGGGAATGTTGGATTCTGATGCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U317690" ref_strand="+" ref_description="SGN-U317690        Tomato 200607 #1 [15 ESTs aligned] arabidopsis/peptide: | Symbol: None | endonuclease/exonuclease/phosphatase family protein, similar to SP:P32019 Type II inositol-1,4,5-trisphosphate 5-phosphatase precursor (EC 3.1.3.56) {Homo sapiens}; contains Pfam profile PF03372: Endonuclease/Exonuclease/phosphatase family | chr1:17438041-17440836 REVERSE | Aliases: F16N3.22, F16N3_22(evalue: 2e-108, score=389) genbank/nr: putative(evalue: 1e-111, score=405)">
      <seq>cttgtgcttcccattcaagaacactagtgatactcaatattcaagaaattaaaacaacatttttttcttctcaatggagggattatgtgtaaagctttttgaagcatcaagaaagtacaaaatgaagagacataaagctgaagcaataggaatggtagtagatagttttgaggcaagtcatgaagggatcaaaactattgatatccaaaaacgttgtgaattctctggaacttctcatctttgcatctatttcgtcacttggaatatgaacggtcaggtaccttgtgaggatatagcaaaattagttggtgaagacagaaaatatgatttattggtgatgggtttgcaagaggcacctagaaataatatttgcaagttattgaagaacacattggctgatactcatatgcttttgggaaaatctgtaatgcaatctgtacaactctatgtatttggccccaagaattcagagcaatttacaagagaagtaaaagtggataagcatgaagttggaggattaggttggttaatcagaagaaaaaaaggagcagtggctattaaaatcagctataaaggcatacaaatggtttttatttcttgtcacctctctgctcatgctcgtaatgtagaagagaggaatttgcaattcaaacatatatcaaattcacttttctcaaagaataagaatccttatgctaaatcagcacaacttactgtatggttaggagatttaaattatagactccaaggcataaattcttatcctgctagagatctcatccatggaaatctccaccaaatgttaactagcaaagatcaactattacaagaagcagaaagaggagagatttttaatggttattgtgaaggtgcattagattttaaaccaacttataaatatgatattggaagcagcagttatgatacaagtcacaaggttagagtaccatcatggacagacagaatattattcaagatagacagtgacaatgtaaatgcaactttacattcttatgaagccattgaaagcatacaaagctctgatcacaagccagtcaaagctcatctatgcttaaaattgaaaaaataattgatattcatattcctcacaaataatttgttccaaaattaaatgtttttattaagtacattaatgattaattaattaaccatgtgaaaatattcttttattgttgttaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0223O22.1" temp_strand="-" temp_description="C04HBa0223O22.1  CU459025.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0223O22 sequenced_by:sanger upload_account_name:uk">
        <position start="30908" stop="26162"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30608" g_stop="30498" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="111" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30497" i_stop="30400" i_length="98">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30399" g_stop="30234" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="112" r_stop="277" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30233" i_stop="29849" i_length="385">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29848" g_stop="29718" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="278" r_stop="408" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29717" i_stop="28538" i_length="1180">
            <donor d_prob="0.943" d_score="1.00"/>
            <acceptor a_prob="0.039" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28537" g_stop="28461" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="409" r_stop="485" r_length="77" r_score="0.974"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="28460" i_stop="28333" i_length="128">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.926" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28332" g_stop="28207" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="486" r_stop="611" r_length="126" r_score="0.992"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="28206" i_stop="27237" i_length="970">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="27236" g_stop="27049" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="612" r_stop="799" r_length="188" r_score="0.995"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="27048" i_stop="26958" i_length="91">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="26957" g_stop="26820" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="800" r_stop="937" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="26819" i_stop="26723" i_length="97">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="26722" g_stop="26461" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="938" r_stop="1199" r_length="262" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0223O22.1" gen_strand="-" ref_id="SGN-U317690" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>1199</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0223O22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U317690" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30608" e_stop="30498"/>
          <exon e_start="30399" e_stop="30234"/>
          <exon e_start="29848" e_stop="29718"/>
          <exon e_start="28537" e_stop="28461"/>
          <exon e_start="28332" e_stop="28207"/>
          <exon e_start="27236" e_stop="27049"/>
          <exon e_start="26957" e_stop="26820"/>
          <exon e_start="26722" e_stop="26461"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGTGCTTCCCATTCAAGAACACTAGTGATACTCAATATTCAAGAAATTAAAACAACATTTTTTTCTTCTCAATGGAGGGATTATGTGTAAAGCTTTTTGAAGCATCAAGGTAATTAATAATTTTTCTATATATTTCGATCCATTTTATTTGCTATATTATTACTATATAATATTCTTTTGATGAAATTAAATTATTTTTTTCTAAAGAAAGTACAAAATGAAGAGACATAAAGCTGAAGCAATAGGAATGGTAGTAGATAGTTTTGAGGCAAGTCATGAAGGGATCAAAACTATTGATATCCAAAAACGTTGTGAATTCTCTGGAACTTCTCATCTTTGCATCTATTTCGTCACTTGGAATATGAACGGTCAGGTACGTCCACTTTTACTTGTCCACTTAAAATAGGTTACGAACATTTTTTTCACTAAGTAGCTCATTTACTATAACAAAAATATCACTAACGGTATTTAATTCTTAATTGCCACTAAATATGTATTTTTAGCGGCAATTGTCAATCTTTATATATGTCCCTAAAGCCTTTAGCGACATTGATTCTAACGATACTTAACTTATGCTGGTAAAGATATTATTACTCTTTATTAGTGTTAATATTTAATGCCGCTAAAAATTATTTTTATCATAATAATTGCTAATAATGAGATTGAATTAGCCACGAATATTATTATATAGTAGATCATAGAAATTAATTATCTATCGCTAATTTACGGGTATATTATTTTTTGTATACAATGTGAAGGTACCTTGTGAGGATATAGCAAAATTAGTTGGTGAAGACAGAAAATATGATTTATTGGTGATGGGTTTGCAAGAGGCACCTAGAAATAATATTTGCAAGTTATTGAAGAACACATTGGCTGATACTCATATGTATGTATATCTATCTATCTTCGATTTATTTATTTCATACTTCTTTTACGAAAAATTTAAGTTATATATACTAATAGTTATAATATTCGATATTTTTGCATTATCAACTTGTACAAAATGATTGCTTATTCAATTTACTAATGCAGGCTAGACATGTTAGAAGTTATTATTTCTGTTTTAATTTATTTGTCTTTTTTTTTTTTCAGTCTATTTTAATTTTCTTTAAAAACCACAAAACTAAATAATATGTTGGTACATTCAACGTATCACCAAAAAATTCAAAAGTTTTTCTTTTACTTTCTTAACTCTGTACAAAATTAAGACTAGATAAACAAACTGAAACAAAAAGACTGTAATGATATAAAATGTAAAAATTTTAATTTCTTTGCTCTTCGTTTTCTCTATTATTAAATGTAAATTTTTTTTTAGCAAATTGGTTTTTTTCTCAGGGTAGCAAGGTTGTATACATGTTTATGGAAATGAAGAAAATAAAATCCAAAGACGATAAGTTCAAATATAGGAAGATAATAAGAAGCATATTGACAATGACTAATTACTAATTTTGACGTGTTTTCCCTCTATTATAAAGTTTTAATTTCAATTATTTTGTTTTTCATCCTAGAAAAGTCATGTGTTCCTCGATATTTTTAGTAATAATTTTCGTGGTCCTATTTAAAATTCTAAGAAAAAACAGTACTAATATACATTGCATCTTGACATATATAATTTTTTTGTTGTTACAATTTTTTTTATCTAATTCTTTTCCATATGACTTTTTAATTCCATTTTGAATTGTTTTACATGCATTGTTAATTTTTATGAAATTATCTCTATATTGCGTAATACACTATTTTTTTTCTTCAAAATTTATTTTATGAGATTATATAAAATAAATATGTTATTATTGTTATGATACAGAGGTCTACATGGATTTGGTTTTAATATGGTTTCAATTCAACCACAATAACACTACTAGAAAGTCACTTTCTTTTTATTGTCTCTACTCTCCAGTTATATTACTCAAAAAATTTATCTGTATTGAGTGTTTGTATCAAATTAATGTAATTTTCATTATGATATAATTTAATGAAGTAAAACACATATTTAGTAATTATGACATGAATAAACTAACAAAAGTTATAATATTTTTGACATTTTTTCATTAATTTTGGTGAGGAAGGCTTTTGGGAAAATCAGTAATGCAATCTGTACAACTCTATGTGTTTGGCCCCAAGAATTCAGAGCAATTTACAAGAGGTATAGTTTCTTTATTTCTTTTATTTATATCACAAGAATATATATATTACTAAACTTTTTTGTTAATTGATTAAATAAGGTTATTAATTAATTAATTAATGTACAATAAATGTGGTTTTTTTATATAGAAGTAAAAGTGGATAAGCATGAAGTTGGAGGATTAGGTTGGTTAATCAGAAGAAAAAAAGGAGCAGTGGCTATTAAAATTAGCTATAAAGGCATACAAATGGTTTTTATTTCTTGTCACCTCTCTGGTAAGTTCCCTAAATCTCTATATATTCTTTTATCATTAATCAAATATATTTAGCTGTTCGGAATATAATCAAATGAAAATATAGTACTCTTTCCAATATATTTAATTTGATACATTCACTGTTGATATTTCACGTCAACTTTTTATACTTATATGATGATTTCTATGAATATAAAATTTAAAAGTAATTTATTTTTAAAATAATGTATCGTATAAATTAAGACAGAGAAAGTACTGATCAAAAAATCAAATCAAAAAACCTTTTGACTTATCTCCTTCTTAATATTTTAGATTTAAATTAAACTTATATACGCTTTATATTCTCTGTATGTAGAGTGGTAGTTAGGTAGGTATAAAGATTGGACCCATAATGGACCTAATTGCTTAGAGTACGTTGAAAAATATAACAAAAATCTCTTCGTTTTATATTAGTTATTTATTTTTTTTATATTCTTTCTCTCGATTTTGTATTTTGATAAGTTTAATAACTATTTTTAGTACCGTAGACGCTTAATACGGACGACATTTAAAGAGAGTATGTGTACATTAAAATTTGCTTTCAAATTCATCACGTAATGTTGGTGACACAAAAATTCAAACTGTATAACTGCCTCCACCTTTTTGTGGCCATTTTTTAAATAGTGCCTACTAGGCCCAATGTAAAAACTAAATATATCTTTGGGTCATTTGCACTTTTGGCCTTATTTTGTGTTGATCTTTTAACTTTTGCCCCTATTAAAAGTTTATATTTCCATATTTTAATATCGTTTATATACAACATGTCTTTAGTTTCTAAAATAACTTATGCCTCATTAGATATAACTAGTTCGATTGCTAAAGGGTTAAAAAAAAGAAAAAGGTCATTTGAAGGACAAAACGTGTAATATTATGTATATATATTTCGTATCAGCTTAGAAAAGTCTAATTTTGATTATACATAATTTATCGATTATTCAATTTTACGTTTGCAGCTCATGCTCGTAATGTAGAAGAGAGGAATTTGCAATTCAAACATATATCAAATTCACTTTTCTCAAAGAATAAGAATCCTTATGCTAAATCAGCACAACTTACTGTATGGTTAGGAGATTTAAATTATAGACTCCAAGGCATAAATTCTTATCCTGCTAGAGATCTCATCCATGAAAATCTCCACCAAGTATGTACATTTACGAATTTTTTAAGTTATATATTTTATATACACTGACGGTATAAAGATTTGAATATTTTGTTTTCGACTGATATTGTAGATGTTAACTAGCAAAGATCAACTATTACAAGAAGCAGAAAGAGGAGAGATTTTTAATGGTTATTGTGAAGGTGCATTAGATTTTAAACCAACTTATAAATATGATATTGGAAGCAGCAGTTATGATACAAGTCACAAGGTAATTAAATTAATTAATTTATAAGTCTAATAATAATTTATAATTGATCCTTTTATTCAAATCTTTTTTTACAATAATTGTTTGTTTAAAAATGCAGGTTAGAGTACCATCATGGACAGACAGAATATTATTCAAGATAGACAGTGACAATGTAAATGCAACTTTACATTCTTATGAAGCCATTGAAAGCATACAAAGCTCTGATCACAAGCCAGTCAAAGCTCATCTATGCTTAAAATTGAAAAAATAATTGATATTCATATTCCTCACAAATAATTTGTTCCAAAATTAAATGTTTTTATTAAGTACATTAATGATTAATTAATTAACCATGTGAAAATATTCTTTTATTGTTGTTC</genome_strand>
        <mrna_strand>CTTGTGCTTCCCATTCAAGAACACTAGTGATACTCAATATTCAAGAAATTAAAACAACATTTTTTTCTTCTCAATGGAGGGATTATGTGTAAAGCTTTTTGAAGCATCAAG..................................................................................................AAAGTACAAAATGAAGAGACATAAAGCTGAAGCAATAGGAATGGTAGTAGATAGTTTTGAGGCAAGTCATGAAGGGATCAAAACTATTGATATCCAAAAACGTTGTGAATTCTCTGGAACTTCTCATCTTTGCATCTATTTCGTCACTTGGAATATGAACGGTCAG.................................................................................................................................................................................................................................................................................................................................................................................................GTACCTTGTGAGGATATAGCAAAATTAGTTGGTGAAGACAGAAAATATGATTTATTGGTGATGGGTTTGCAAGAGGCACCTAGAAATAATATTTGCAAGTTATTGAAGAACACATTGGCTGATACTCATAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTTGGGAAAATCTGTAATGCAATCTGTACAACTCTATGTATTTGGCCCCAAGAATTCAGAGCAATTTACAAGAG................................................................................................................................AAGTAAAAGTGGATAAGCATGAAGTTGGAGGATTAGGTTGGTTAATCAGAAGAAAAAAAGGAGCAGTGGCTATTAAAATCAGCTATAAAGGCATACAAATGGTTTTTATTTCTTGTCACCTCTCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATGCTCGTAATGTAGAAGAGAGGAATTTGCAATTCAAACATATATCAAATTCACTTTTCTCAAAGAATAAGAATCCTTATGCTAAATCAGCACAACTTACTGTATGGTTAGGAGATTTAAATTATAGACTCCAAGGCATAAATTCTTATCCTGCTAGAGATCTCATCCATGGAAATCTCCACCAA...........................................................................................ATGTTAACTAGCAAAGATCAACTATTACAAGAAGCAGAAAGAGGAGAGATTTTTAATGGTTATTGTGAAGGTGCATTAGATTTTAAACCAACTTATAAATATGATATTGGAAGCAGCAGTTATGATACAAGTCACAAG.................................................................................................GTTAGAGTACCATCATGGACAGACAGAATATTATTCAAGATAGACAGTGACAATGTAAATGCAACTTTACATTCTTATGAAGCCATTGAAAGCATACAAAGCTCTGATCACAAGCCAGTCAAAGCTCATCTATGCTTAAAATTGAAAAAATAATTGATATTCATATTCCTCACAAATAATTTGTTCCAAAATTAAATGTTTTTATTAAGTACATTAATGATTAATTAATTAACCATGTGAAAATATTCTTTTATTGTTGTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U317689" ref_strand="+" ref_description="SGN-U317689        Tomato 200607 #1 [5 ESTs aligned] arabidopsis/peptide: | Symbol: None | endonuclease/exonuclease/phosphatase family protein, similar to SP:P32019 Type II inositol-1,4,5-trisphosphate 5-phosphatase precursor (EC 3.1.3.56) {Homo sapiens}; contains Pfam profile PF03372: Endonuclease/Exonuclease/phosphatase family | chr1:17438041-17440836 REVERSE | Aliases: F16N3.22, F16N3_22(evalue: 4e-31, score=130) genbank/nr: putative(evalue: 2e-30, score=134)">
      <seq>tttttttttataaacttgtgcttcccattcaagaacactagtgatactcaatattcaagaaattaaaacaacatttttttcttctcaatggagggattatgtgtaaagctttttgaagcatcaaggtaattaataatttttctatatatttcgatccattttatttgctatattattactatataatattcttttgatgaaattaaattatttttttctaaagaaagtacaaaatgaagagacataaagctgaagcaataggaatggtagtagatagttttgaggcaagtcatgaagggatcaaaactattgatatccaaaaacgttgtgaattctctggaacttctcatctttgcatctatttcgtcacttggaatatgaacggtcaggtaccttgtgaggatatagcaaaattagttggtgaagacagaaaatatgatttattggtgatgggtttgcaagaggcacctagaaataatatttgcaagttattgaagaacacattggctgatactcatatgcttttgggaaaatctgtaatgcaatctgtacaactctatgtatttggccccaagaattcagagcaatttacaagagaagtaaaagtgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0223O22.1" temp_strand="-" temp_description="C04HBa0223O22.1  CU459025.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0223O22 sequenced_by:sanger upload_account_name:uk">
        <position start="30922" stop="28161"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30622" g_stop="30234" g_length="389"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="389" r_length="389" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30233" i_stop="29849" i_length="385">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29848" g_stop="29718" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="390" r_stop="520" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29717" i_stop="28538" i_length="1180">
            <donor d_prob="0.943" d_score="1.00"/>
            <acceptor a_prob="0.039" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28537" g_stop="28461" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="521" r_stop="597" r_length="77" r_score="0.974"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28460" i_stop="28333" i_length="128">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.926" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28332" g_stop="28320" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="598" r_stop="610" r_length="13" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0223O22.1" gen_strand="-" ref_id="SGN-U317689" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>610</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0223O22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U317689" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30622" e_stop="30234"/>
          <exon e_start="29848" e_stop="29718"/>
          <exon e_start="28537" e_stop="28461"/>
          <exon e_start="28332" e_stop="28320"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTTTTTATAAACTTGTGCTTCCCATTCAAGAACACTAGTGATACTCAATATTCAAGAAATTAAAACAACATTTTTTTCTTCTCAATGGAGGGATTATGTGTAAAGCTTTTTGAAGCATCAAGGTAATTAATAATTTTTCTATATATTTCGATCCATTTTATTTGCTATATTATTACTATATAATATTCTTTTGATGAAATTAAATTATTTTTTTCTAAAGAAAGTACAAAATGAAGAGACATAAAGCTGAAGCAATAGGAATGGTAGTAGATAGTTTTGAGGCAAGTCATGAAGGGATCAAAACTATTGATATCCAAAAACGTTGTGAATTCTCTGGAACTTCTCATCTTTGCATCTATTTCGTCACTTGGAATATGAACGGTCAGGTACGTCCACTTTTACTTGTCCACTTAAAATAGGTTACGAACATTTTTTTCACTAAGTAGCTCATTTACTATAACAAAAATATCACTAACGGTATTTAATTCTTAATTGCCACTAAATATGTATTTTTAGCGGCAATTGTCAATCTTTATATATGTCCCTAAAGCCTTTAGCGACATTGATTCTAACGATACTTAACTTATGCTGGTAAAGATATTATTACTCTTTATTAGTGTTAATATTTAATGCCGCTAAAAATTATTTTTATCATAATAATTGCTAATAATGAGATTGAATTAGCCACGAATATTATTATATAGTAGATCATAGAAATTAATTATCTATCGCTAATTTACGGGTATATTATTTTTTGTATACAATGTGAAGGTACCTTGTGAGGATATAGCAAAATTAGTTGGTGAAGACAGAAAATATGATTTATTGGTGATGGGTTTGCAAGAGGCACCTAGAAATAATATTTGCAAGTTATTGAAGAACACATTGGCTGATACTCATATGTATGTATATCTATCTATCTTCGATTTATTTATTTCATACTTCTTTTACGAAAAATTTAAGTTATATATACTAATAGTTATAATATTCGATATTTTTGCATTATCAACTTGTACAAAATGATTGCTTATTCAATTTACTAATGCAGGCTAGACATGTTAGAAGTTATTATTTCTGTTTTAATTTATTTGTCTTTTTTTTTTTTCAGTCTATTTTAATTTTCTTTAAAAACCACAAAACTAAATAATATGTTGGTACATTCAACGTATCACCAAAAAATTCAAAAGTTTTTCTTTTACTTTCTTAACTCTGTACAAAATTAAGACTAGATAAACAAACTGAAACAAAAAGACTGTAATGATATAAAATGTAAAAATTTTAATTTCTTTGCTCTTCGTTTTCTCTATTATTAAATGTAAATTTTTTTTTAGCAAATTGGTTTTTTTCTCAGGGTAGCAAGGTTGTATACATGTTTATGGAAATGAAGAAAATAAAATCCAAAGACGATAAGTTCAAATATAGGAAGATAATAAGAAGCATATTGACAATGACTAATTACTAATTTTGACGTGTTTTCCCTCTATTATAAAGTTTTAATTTCAATTATTTTGTTTTTCATCCTAGAAAAGTCATGTGTTCCTCGATATTTTTAGTAATAATTTTCGTGGTCCTATTTAAAATTCTAAGAAAAAACAGTACTAATATACATTGCATCTTGACATATATAATTTTTTTGTTGTTACAATTTTTTTTATCTAATTCTTTTCCATATGACTTTTTAATTCCATTTTGAATTGTTTTACATGCATTGTTAATTTTTATGAAATTATCTCTATATTGCGTAATACACTATTTTTTTTCTTCAAAATTTATTTTATGAGATTATATAAAATAAATATGTTATTATTGTTATGATACAGAGGTCTACATGGATTTGGTTTTAATATGGTTTCAATTCAACCACAATAACACTACTAGAAAGTCACTTTCTTTTTATTGTCTCTACTCTCCAGTTATATTACTCAAAAAATTTATCTGTATTGAGTGTTTGTATCAAATTAATGTAATTTTCATTATGATATAATTTAATGAAGTAAAACACATATTTAGTAATTATGACATGAATAAACTAACAAAAGTTATAATATTTTTGACATTTTTTCATTAATTTTGGTGAGGAAGGCTTTTGGGAAAATCAGTAATGCAATCTGTACAACTCTATGTGTTTGGCCCCAAGAATTCAGAGCAATTTACAAGAGGTATAGTTTCTTTATTTCTTTTATTTATATCACAAGAATATATATATTACTAAACTTTTTTGTTAATTGATTAAATAAGGTTATTAATTAATTAATTAATGTACAATAAATGTGGTTTTTTTATATAGAAGTAAAAGTGGA</genome_strand>
        <mrna_strand>TTTTTTTTTATAAACTTGTGCTTCCCATTCAAGAACACTAGTGATACTCAATATTCAAGAAATTAAAACAACATTTTTTTCTTCTCAATGGAGGGATTATGTGTAAAGCTTTTTGAAGCATCAAGGTAATTAATAATTTTTCTATATATTTCGATCCATTTTATTTGCTATATTATTACTATATAATATTCTTTTGATGAAATTAAATTATTTTTTTCTAAAGAAAGTACAAAATGAAGAGACATAAAGCTGAAGCAATAGGAATGGTAGTAGATAGTTTTGAGGCAAGTCATGAAGGGATCAAAACTATTGATATCCAAAAACGTTGTGAATTCTCTGGAACTTCTCATCTTTGCATCTATTTCGTCACTTGGAATATGAACGGTCAG.................................................................................................................................................................................................................................................................................................................................................................................................GTACCTTGTGAGGATATAGCAAAATTAGTTGGTGAAGACAGAAAATATGATTTATTGGTGATGGGTTTGCAAGAGGCACCTAGAAATAATATTTGCAAGTTATTGAAGAACACATTGGCTGATACTCATAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTTGGGAAAATCTGTAATGCAATCTGTACAACTCTATGTATTTGGCCCCAAGAATTCAGAGCAATTTACAAGAG................................................................................................................................AAGTAAAAGTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U330703" ref_strand="+" ref_description="SGN-U330703        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: ATCG00340.1 | Symbol: PSAB | Encodes the D1 subunit of photosystem I  and II reaction centers. | chrC:37375-39579 REVERSE | Aliases: PSAB (evalue: 0.0001, score=33.5)">
      <seq>cggggagtactatgctatgtagtagttcacacatcatttgcttccattttttccggcgtaacagatttaccaaattcatccgcctgaaacaaaggattaatgatggttaattagagggttgtagcttctgatgtataacttgtttgtgatccacgaccatttgttctgccattgctctatgtgaagtgatttagaccatacgagtttgttgggaaggagtgagcagttcttacggataatattgaagagcacagttgaatgatatgcaaagcggcggtggagctgcaaaaatcttcaaaaagagctttatttggacctttgaggcatgacattttttacaatctctttacaaaaaaaatgagtgtaatggtacgtcatgtgcttctttcatagtaactgtgtaatgtgataaaatgaaccatttaatttgctttctttcattgttctcactgatgtgtgcttctttcgacattttctgacgataattagtcccctagttttcaatttatgtgctacagtgcttgacagagtaaagtactgcatttaccttttgagttaatttactataatttctggcccaattatagtggtcaacatcaaccactcggcctcgattgcatgatgacgttgtgcaatgggaaaaataattgcaatggctaaatggtgatgtgaaagatcagccatcccttaaatctgtgtttgtgatgaaatcctctcccagaagaagtcgaatggccattcccgccccttgagcattaccaagtaaatgactactttaatcgtagacattgatcataattggttaaaaatggccagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0223O22.1" temp_strand="+" temp_description="C04HBa0223O22.1  CU459025.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0223O22 sequenced_by:sanger upload_account_name:uk">
        <position start="33958" stop="37585"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34258" g_stop="34351" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="94" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34352" i_stop="34655" i_length="304">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34656" g_stop="34755" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="194" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="34756" i_stop="36577" i_length="1822">
            <donor d_prob="0.943" d_score="1.00"/>
            <acceptor a_prob="0.634" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="36578" g_stop="36660" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="276" r_length="82" r_score="0.988"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="36661" i_stop="36744" i_length="84">
            <donor d_prob="0.269" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="36745" g_stop="37285" g_length="541"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="817" r_length="541" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0223O22.1" gen_strand="+" ref_id="SGN-U330703" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>818</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0223O22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U330703" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34258" e_stop="34351"/>
          <exon e_start="34656" e_stop="34755"/>
          <exon e_start="36578" e_stop="36660"/>
          <exon e_start="36745" e_stop="37285"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGGGAGTACTATGCTATGTAGTAGTTCACACATCATTTGCTTCCATTTTTTCCGGCGTAACAGATTTACCAAATTCATCCGCCTGAAACAAAGGTATTCTTCTTCTTCTATCTACTGATTTAGCCCTAAATTGCGGTTGAGCATGAAAATTGTATATCTTTTTCTTGCCCCATTGTGTTGAAGTTCCATTTTAGGTTAATTTTGGTGTGATTTGAATCATTGATAGAGTCTATAAAACAAAGGTGTGTTTTGTCGGTGATGTTTTTTTGAGTTTTTATTTGTCGGTAATTTTGTTTTCTAGGTTATTAGCCCTATAAAGTTTGTGTTTTTTGGGGATATTGATGTGTTTTGTAAGACATTGTTGAAAGTTTATATGATTCTAGTGGGGTTTTTTCAGGATTAATGATGGTTAATTAGAGGGTTGTAGCTTCTGATGTATAACTTGTTTGTGATCCACGACCATTTGTTCTGCCATTGCTCTATGTGAAGTGATTTAGGTGAGTCATAAGCAGATGTCTAAGTGCTACTCTTTTCTTTTCATTGACTAATTGCTACTGATTTAGTGTCACTCGGAAGCAGCGAGTTGCTTCATTTGCCTTTTTATCTTGCTGATTTGTTGTCATAATATTCCTGCAATCCTGCTTCAATTACATTTTTTTGAACTGGAGGTTTGTGGAAAACAACTTCTCTAGACTTACAAGGATAAGGGTAAGGTATAGTACATCTTACCTTCACAGATTCGACTTGTGGTATTACAGTGGGTATGATAAATTGAGTGGCACAATGTACTGGAAGTATATTAGTTTCAAAATGAAATGATTCATGTGAAGATTGTGCTTCAATTAGTAGATAACAAGCACAGCACGTATTACAACTGAATGAAGATAATTTTTAAGGCGTTTGTTTTTCTATATTTCCTTTTGGAATCTTGAGAATTTTTTTTGCAAAAATGTGTTTCTTTGGAATCTTCTGAAAAGCTATTACTTTGATGAAGTGTTTTTAGGGTGTTCTTCAACTCATAAATCTTCAAAAACCAACTATCCAAAAACATTTTAGTTTTTGCATGTTTTCAAAAATCATCCAAACAAACCTTATAAAAAAATGTTATCCGAACAACTCCTATAAATTTATGTAATGATAACATTAGCCAATTGGTGAAATTAGCAATTAGGGCATCAAATCAACATTTGATGTGTTTGCATCTATTGATGGATGAATTCAATATACTAATGGATTCTAACTCCGCATTTTTAGAAGATACAACTTCTGTGGTGAAGGAATAAGCAGTTCTTTTGGATTATAGTAAGGATATATGGCTTGAATGTTTATGTGAAGCGAATGTATACCTTCTGTTTACTATATGGATGCTAAATCTGTTTACTATATGGATGCTAAAAAATTCTGCTAGTTTGTAAAACATGATGAGGACTATGGGAAAAAACTTGTTTTGATCCACACTCATTTCTTCTGCCACTGCTCTCTGTAAAGTGATTTAGGTGCGCCACTTTGTTATCCATGTTATAAGCATCTGTCTAGGTGTGTTCCTGGGATAAGCAGAAGTTTTTGCTTATTGACTAACTACCACTGATTGATGGTAAATACTTACCCACATCGGGTGTTATGCTTAAATAAACAGTTAACCTTAAGAATTAGCAAATTTAAGTGAAAATGCATTTCACTTAACCGTGTTTAAGTGTTACACAGTGTATATGCAAGATATGTGTGGATATTCATTTTATTGGTGTAAGCACCTATTCAGGGTTAAGATTTTACCTGATTTAGTGCCTCTCGGAAGCTTTTGACTGCGATTTATGTTAGGGATTGTCCATAAATGTTGATCAATTGAGTGTAACAGTGGAATTTAAAGTACTTAAGTGTCAAAATCAAATGATTCACTTTAAGACCGTGCCTCAATTAGTAGAAAAACAAGCATAACACACCTATTACTACTAAATAAAGAAATATCTAAGGTGTTTGTTCTGAAAGTTTCTTTGAGATCTTGGAAGAAATTTTGCGAAATGTGTTTCTTTTGGAGTCTTCAGAAAAGCTATTTCTTGAGCAAGTTATTTAGGGTGATCTCCATTCACAAATCTTCAAAACCAACTATCCAAACACATTTTCTGTTTTCATGGTTTTAAAGAATTTCTTTTTAGACAACTTCTTTCAAAAGTTATCCGTTCAACTCTTATATGACTCTGTGATGAATACATTAGCTAATTGTTGAAGTTTGGACCATCTGTTTTCAAACCACATTTAAAGTGTTTGCTTCTGATGATGGGTGAGTTCAACATATTAACAAATTTTACACAACATTTTTAGACCATACGAGTTTGTTGGTGAAGGAGTGAGCAGTTCTTACGGATAATATTGAAGAGCACAGTTGAATGATATGCAAAGCGGCGGTGTGTCTTCCGTTACTCTATGGATGCTAAAAAGTTTTTCTACTTGGTAGCTTATTGTACATTTTTCCCTTTTATATGAATCAGGTGGAGCTGCAAAAATCTTCAAAAAGAGCTTTATTTGGACCTTTGAGGCATGACATTTTTTACAATCTCTTTAC-AAAAAAATGAGTGTAATGGTACGTCATGTGCTTCTTTCATAGTAACTGTGTAATGTGATAAAATGAACCATTTAATTTGCTTTCTTTCATTGTTCTCACTGATGTGTGCTTCTTTCGACATTTTCTGACGATAATTAGTCCCCTAGTTTTCAATTTATGTGCTACAGTGCTTGACAGAGTAAAGTACTGCATTTACCTTTTGAGTTAATTTACTATAATTTCTGGCCCAATTATAGTGGTCAACATCAACCACTCGGCCTCGATTGCATGATGACGTTGTGCAATGGGAAAAATAATTGCAATGGCTAAATGGTGATGTGAAAGATCAGCCATCCCTTAAATCTGTGTTTGTGATGAAATCCTCTCCCAGAAGAGTTCGAATGGCCATTCCCGCCCCTTGAGCATTACCAAGTAAATGACTACTTTAATCGTAGACATTGATCATAATTGGTTAAAAATTGGCCAGC</genome_strand>
        <mrna_strand>CGGGGAGTACTATGCTATGTAGTAGTTCACACATCATTTGCTTCCATTTTTTCCGGCGTAACAGATTTACCAAATTCATCCGCCTGAAACAAAG................................................................................................................................................................................................................................................................................................................GATTAATGATGGTTAATTAGAGGGTTGTAGCTTCTGATGTATAACTTGTTTGTGATCCACGACCATTTGTTCTGCCATTGCTCTATGTGAAGTGATTTAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCATACGAGTTTGTTGG-GAAGGAGTGAGCAGTTCTTACGGATAATATTGAAGAGCACAGTTGAATGATATGCAAAGCGGCG....................................................................................GTGGAGCTGCAAAAATCTTCAAAAAGAGCTTTATTTGGACCTTTGAGGCATGACATTTTTTACAATCTCTTTACAAAAAAAATGAGTGTAATGGTACGTCATGTGCTTCTTTCATAGTAACTGTGTAATGTGATAAAATGAACCATTTAATTTGCTTTCTTTCATTGTTCTCACTGATGTGTGCTTCTTTCGACATTTTCTGACGATAATTAGTCCCCTAGTTTTCAATTTATGTGCTACAGTGCTTGACAGAGTAAAGTACTGCATTTACCTTTTGAGTTAATTTACTATAATTTCTGGCCCAATTATAGTGGTCAACATCAACCACTCGGCCTCGATTGCATGATGACGTTGTGCAATGGGAAAAATAATTGCAATGGCTAAATGGTGATGTGAAAGATCAGCCATCCCTTAAATCTGTGTTTGTGATGAAATCCTCTCCCAGAAGAAGTCGAATGGCCATTCCCGCCCCTTGAGCATTACCAAGTAAATGACTACTTTAATCGTAGACATTGATCATAATTGGTTAAAAA-TGGCCAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U312731" ref_strand="+" ref_description="SGN-U312731        Tomato 200607 #1 [19 ESTs aligned] arabidopsis/peptide: | Symbol: None | ribosomal protein S9 (RPS9), identical to ribosomal protein S9 (Arabidopsis thaliana) GI:5456946 | chr1:28161191-28162930 REVERSE | Aliases: F25A4.6, F25A4_6(evalue: 9e-63, score=237) genbank/nr: gi|7578887|gb|AAF64170.1| plastid ribosomal protein S9 precursor [Spinacia oleracea](evalue: 3e-64, score=248)">
      <seq>atcggccgaattgagacagttagatagagagagtcgaaaatggcgatttccgtggcttctctcgcttcatcttttgcttctctttcattttcttctcagatttctcaaaaaccctatgctgtatccctttctcattcgaagcaattctctttctctctcgcttccaaaatctctacgcttgtagtgtcagcttctgttgctgaagcaccggagacggaggaattggaaaccagagagaatcttttgaagcttgtgaaaagtagacttcctggaggtttcgctgcgcagcctatttttggaactggtagacgtaaaagtgcaagtgctcgtgttgttcttcaggaaggttctggaaaaatcatcatcaactatcgtgatgctaaggaatatcttcaaggaaatccattgtggattcaatatgtcaaaactccactggccactttaggatatgaggctagttatgacatttttgtcaaggtggaaggcggtggcctttctgggcaggctcaagcaatttcccttggcattgctcgtgcactcctaaaggttagtgagagccatagaaaaccattgagggaggagggtctgttaactagagatgccagagttgttgagcggaagaaagttggtctcaagaaggctcgcaagcgtccacaattttccaagcgttgaggttggtacttactcactgtggcagcatttggtagaaagatttggtggtttattgacccagattggggaaaaaagagcatatcaatgatctgttttgactgttgaagatgagaaaatgtttcagatttatcatcactcaaattgcttctttgtgaaatttttgtattagtccctactcagaattacaatttgttctgttgatggtattttttgagtttagtttcttgttcaatgtttaatatagttctggagatttttgtgcctaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0223O22.1" temp_strand="+" temp_description="C04HBa0223O22.1  CU459025.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0223O22 sequenced_by:sanger upload_account_name:uk">
        <position start="40046" stop="43150"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40350" g_stop="40708" g_length="359"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="384" r_length="359" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40709" i_stop="42059" i_length="1351">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42060" g_stop="42348" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="385" r_stop="673" r_length="289" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42349" i_stop="42448" i_length="100">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42449" g_stop="42486" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="674" r_stop="711" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="42487" i_stop="42617" i_length="131">
            <donor d_prob="0.990" d_score="0.00"/>
            <acceptor a_prob="0.996" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42618" g_stop="42846" g_length="229"/>
          <reference_exon_boundary r_type="cDNA" r_start="712" r_stop="943" r_length="232" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="944" polyA_stop="954"/>
      <MATCH_line gen_id="C04HBa0223O22.1" gen_strand="+" ref_id="SGN-U312731" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>915</cumulative_length_of_scored_exons>
        <coverage percentage="0.959" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0223O22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U312731" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40350" e_stop="40708"/>
          <exon e_start="42060" e_stop="42348"/>
          <exon e_start="42449" e_stop="42486"/>
          <exon e_start="42618" e_stop="42846"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAGAGAGTCGAAAATGGCGATTTCCGTGGCTTCTCTTGCTTCATCTTTTGCTTCCCTTTCATTTTCTTCTCAGATTTCTCAAAAACCCTATGCTGTATCCCTTGCTCATTCGAAGCAATTCTCTTTCTCTCTCGCTTCCAAAATCTCTACGCTTGTAGTGTCAGCTTCTGTTGCTGAAGCACCGGAGACGGAGGAATTGGAAACCAGAGAGAATCTTTTGAAGCTTGTGAAAAGTAGACTTCCTGGAGGTTTCGCTGCACAGCCTATTTTTGGAACTGGTAGACGTAAAAGTGCTAGTGCTCGTGTTGTTCTTCAGGAAGGTTCTGGAAAAATCATCATCAACTATCGTGATGCTAAGGTGTTTGTCTATCTCAATTTCACTTCTTTACTTGCAGTTAATGTATGATTTTCTCAATAAAAATTGCATTTTTTAAATTGGGTATTCAGTTTGGCAAGTACAATTGCAGAAAGTAGGATTGCATTGTTCTCGTTACCATTAAATTAGGTCTTGTGATAGCACTGTTCTCCAGGATTTCCGTGTGTTTGAATAGAGTTTGAAGGTGAAACTTGAAAATATTGAGTTTTTGATTCAGTTGTGTTTGGACATGCATTTTACTTGGAAAAAATGGAACTTTTGTGAGTGAAAGTCCCCAAAACCCAAAAATTGGTCTTCTGATCAAATTTCAAGGCCGAGCTAATATTTGAAGATAATTTTTTAAATCTATGACCAAACACTAGCTAAATGTGATGTTTCGAGAAGCTAATGTGCCTTAATTGCTAAAGTGATTAGTATTTGATGAAATGGATCTATTAGAGATGAATAGCTTCATATAGCTAATCCCAACTAGTTTGCCATGAAGCTATACCGTGTTCCTGAGGAATTATCTGCTATTAGAGGAAACATGATAAGAAAAAATGAAAGATTATTGCAGATGGTAATTTAATGAAGGTTTCCAGTGGTTTCTAATATCTGCATTAGGTAATATGATGCTTAGTATCATATATGACACGGTTAGCCAATTTGTTTATCTGGTTTGACCATGATTCTCATATGTCTCTTTTAGAAGTTGCTGGTTGCTGAAAATGGTCACTTCAAATCAATGTAGCTAGAAAGCTTTAGAAAGGCATATCGTACTTCATAATGTTCTGTGTGATGAAATTCATTATCGAGGGAAAACTCTGTTAAAAGTGTATAGAGATCGTAAAGTAGAAAATCCAGCCTTGAAAAGCAAATAGAACATAGAAGCAGGAAGCATACTGCTGATACCTTTGAGTTTCTTGGGAAATGCATGCATAAACTATTTTTGTGGATCAGTGGTGCATATAACAGAACCATGAGAGGAACACAACTTCTCCGTTTCAAGTTCCGTAAATAAAAGCATGGCAGCAGAGGAACAATCAAATTAGATAAGTAGGATGTGCTAAGTTCTTATAAAGAAGTAACCTGTGTTAAGCAGACTGGAAAACTCCCGAGATCCAAAAGGTGTGTGAAATTTTTGTGTTGTTGCTATGTGAATAGAATTGTTATTTTTTGATAAGGAACCACACAAGTGTTTTTAATATTATTGAGGTCTCTATACTCGAGGTCCGACGATGCAAATCATCAACATTCTGATTAACGCTGCCTGCGTCCTTTTTTATGCTATCCTTTTATTCATCACTTTGTTGCTTTTGACTATATGAGATTTGACGTATGTCATGATTTGCAGGAATATCTTCAAGGAAATCCATTATGGATTCAATATGTCAAAACTCCACTGGCCACTTTAGGATATGAGGCTAGTTATGACATTTTTGTCAAGGTGGAAGGCGGTGGTCTTTCTGGGCAGGCTCAAGCAATTTCCCTTGGCATTGCTCGTGCACTCCTAAAGGTTAGCGAGAGCCATAGAAAACCATTGAGGGAGGAGGGTCTGTTAACTAGAGATGCCAGAGTTGTTGAGCGGAAGAAAGTTGGTCTCAAGAAGGCTCGCAAGCGTCCACAATTTTCCAAGCGTTGAGGTTACACTCTGAATATTATCTTTTCCTTCTTTTCTTTGTGCGCTATTTCACTGAAGGACACATGTATGAGAGCTTCTAATTCTTTGCTTTCGCAGTCCAGGTTGGTACTTACTCACTGTGGCAGCATTTGGTAGAAAGGTATGTAAAATCGTCATGCGTTATAGTTGTAGTGAGTTAAAGATAGATTAAGCAAAAAAACTGAATGAGGATTTACATAGGTGTTATCCAATATTTGTGTTTGTAATCCGTTTTCTACTTTTGGTTCACAGATTTGGTGGTTTATTGACCCAGATT-GGGAAAAAAGAGCATATCAATGATCTGTTTTGACTGTTGAAGATGAGAAAATGTTTCTGAATTATCATC-CTC-AATTGCTTCTTTGTAAAAATTTTGTATTAGTCCCTACTCAGAATTACAATTTGTTCTGTTGATGGTATTTTTTGAGTTTAGTTTCTTGTTCAATGTTTAATATAATTCTGGAGATTTTTGTGCCTAAAAAAA</genome_strand>
        <mrna_strand>AGAGAGAGTCGAAAATGGCGATTTCCGTGGCTTCTCTCGCTTCATCTTTTGCTTCTCTTTCATTTTCTTCTCAGATTTCTCAAAAACCCTATGCTGTATCCCTTTCTCATTCGAAGCAATTCTCTTTCTCTCTCGCTTCCAAAATCTCTACGCTTGTAGTGTCAGCTTCTGTTGCTGAAGCACCGGAGACGGAGGAATTGGAAACCAGAGAGAATCTTTTGAAGCTTGTGAAAAGTAGACTTCCTGGAGGTTTCGCTGCGCAGCCTATTTTTGGAACTGGTAGACGTAAAAGTGCAAGTGCTCGTGTTGTTCTTCAGGAAGGTTCTGGAAAAATCATCATCAACTATCGTGATGCTAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATATCTTCAAGGAAATCCATTGTGGATTCAATATGTCAAAACTCCACTGGCCACTTTAGGATATGAGGCTAGTTATGACATTTTTGTCAAGGTGGAAGGCGGTGGCCTTTCTGGGCAGGCTCAAGCAATTTCCCTTGGCATTGCTCGTGCACTCCTAAAGGTTAGTGAGAGCCATAGAAAACCATTGAGGGAGGAGGGTCTGTTAACTAGAGATGCCAGAGTTGTTGAGCGGAAGAAAGTTGGTCTCAAGAAGGCTCGCAAGCGTCCACAATTTTCCAAGCGTTGAG....................................................................................................GTTGGTACTTACTCACTGTGGCAGCATTTGGTAGAAAG...................................................................................................................................ATTTGGTGGTTTATTGACCCAGATTGGGGAAAAAAGAGCATATCAATGATCTGTTTTGACTGTTGAAGATGAGAAAATGTTTCAGATTTATCATCACTCAAATTGCTTCTTTGTGAAATTTTTGTATTAGTCCCTACTCAGAATTACAATTTGTTCTGTTGATGGTATTTTTTGAGTTTAGTTTCTTGTTCAATGTTTAATATAGTTCTGGAGATTTTTGTGCCTAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U328793" ref_strand="-" ref_description="SGN-U328793        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | zinc finger protein-related, contains similarity to zinc finger proteins and Pfam domain, PF01485: IBR domain | chr2:6993916-6997130 REVERSE | Aliases: F7H1.11, F7H1_11(evalue: 4e-97, score=351) genbank/nr: gi|4678205|gb|AAD26951.1| hypothetical protein [Arabidopsis thaliana] (evalue: 3e-95, score=351)">
      <seq>cttgttcgtgtgttatgtgggacctttggcttaagaagtgcgacgatgaagctcccactgtcaattggttgtcagagaaaaccaagcattgtccaaaatgtcataaaattgtggagaaggatggaggatgcaacctggtacagtgtatatgtggacagccattttgttggctctgtggtgaagctactggatttgaacacacatggaatagtatagcaggtcacacttgtggcagatacaaagaaaatcatttgaaaagtgaggaggattctgtagaggactattggcgtcttactcactattatagtcgttataaggctcatattggttcgttgaagattgaagcatctgaatcgaagcaaaaaatacttgataaagtccatagccttgaatcaaaggagttccagttaaaagatttcagctgggcaatgagtggattttatagactcgccttatcaaggcgagttctcgcctgttcctatccatttgcatactactattttggagctctgtttgcaaatgaaataacaaaagaagaacgcgaaataaaacagaacctttttgaggatcaacagcagcaacttgaaacaaatatcgaaagactttcaatgttcttggaagagccatttggtagctatgctgaagataagcttgttgagacaagaatgaagattattactctctccacagtaactgatgacctctgcaaaaacttgtacgagtgcattgacaacgatttgctagttcctctacaacaagcaactcatacaatagttcgttatagatccaatggtgtggaaaaagcatcagaactataggtaggtacagatatactatgtaatgcttctttactattgagcgcgactgcaggttgcattgaacgttgatcatttgaatcgcgttgttctggcttgatgcttccaacttcttgttaaaacattatcaatcaattcaattgtattcttcttaaaaaaaaaaaaaaaaaaaactgagactagttctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0223O22.1" temp_strand="+" temp_description="C04HBa0223O22.1  CU459025.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0223O22 sequenced_by:sanger upload_account_name:uk">
        <position start="44743" stop="46477"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45043" g_stop="45208" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="166" r_length="166" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45209" i_stop="45293" i_length="85">
            <donor d_prob="0.663" d_score="1.00"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="45294" g_stop="45842" g_length="549"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="715" r_length="549" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="45843" i_stop="45918" i_length="76">
            <donor d_prob="0.921" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="45919" g_stop="46163" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="716" r_stop="957" r_length="242" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="969" polyA_stop="989"/>
      <MATCH_line gen_id="C04HBa0223O22.1" gen_strand="+" ref_id="SGN-U328793" ref_strand="-">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>960</cumulative_length_of_scored_exons>
        <coverage percentage="0.956" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0223O22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U328793" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="45043" e_stop="45208"/>
          <exon e_start="45294" e_stop="45842"/>
          <exon e_start="45919" e_stop="46163"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGTTCGTGTGTTATGTGGGACCTTTGGCTTAAGAAGTGCGACGATGAAGCTCCCACTGTCAATTGGTTATCAGAGAAAACTAAGCATTGTCCAAAATGTCATAAAATTGTGGAGAAGGATGGAGGATGCAACCTGGTACAGTGTATATGTGGACAGCCATTTTGGTAAGACTTGTGAATTTGAGTTTTTTTTGTACTTGTAATATGCAGCTTTAGCCGTAAGTTTAAGATTTTGTTTTGTTGTTCGTAGTTGGCTCTGTGGTGAAGCTACTGGATTTGAACACACATGGAATAGTATAGCAGGTCACACTTGTGGCAGATACAAAGAAAATCATTTGAAAAGTGAGGAGGATTCTGTAGAGGACTATTGGCGTCTTACTCACTATTATAGTCGTTATAAGGCTCATATTGGTTCGTTGAAGATTGAAGCATCTGAATCGAAGCAAAAAATACTTGATAAAGTCCATAGCCTTGAATCAAAGGAGTTCCAGTTAAAAGATTTCAGCTGGGCAATGAGTGGATTTTATAGACTCGCCTTATCAAGGCGAGTTCTCGCCTGTTCCTATCCATTTGCATACTACTATTTTGGAGCTCTGTTTGCAAATGAAATAACAAAAGAAGAACGCGAAATAAAACAGAACCTCTTTGAGGATCAACAGCAGCAACTTGAAACAAATATCGAAAGGCTTTCAATGTTCTTGGAAGAGCCATTTGGTAGCTATGCTGAAGATAAGCTTGTTGAGACAAGAATGAAGATTATTACTCTCTCCACAGTAACTGATGACCTCTGCAAAAACTTGTGAGTGTAAATTACACATCTAATTTACAGCAGCACCAACTACATTACTCAATTTGGCTTCTTTTTTTTTTTCCAGGTACGAGTGCATTGACAACGATTTGCTAGTTCCTTTACAACAAGCAACTCATACAATAGTTCGTTATAGATCCAATGGTGTGGAAAAAGCATCAGAACTATAGGTAGGTACAGATATACTATGTAATGCTTCTTTACTATTGAGCGCGACTGCAGGTTGCATTGAACGTTGATCATTTGGATCGCGTTGTTCTGGCTTGATGCTTCTTCCAACTTGTTGTTTAAACACTATCAATCAATTCAATT</genome_strand>
        <mrna_strand>CTTGTTCGTGTGTTATGTGGGACCTTTGGCTTAAGAAGTGCGACGATGAAGCTCCCACTGTCAATTGGTTGTCAGAGAAAACCAAGCATTGTCCAAAATGTCATAAAATTGTGGAGAAGGATGGAGGATGCAACCTGGTACAGTGTATATGTGGACAGCCATTTTG.....................................................................................TTGGCTCTGTGGTGAAGCTACTGGATTTGAACACACATGGAATAGTATAGCAGGTCACACTTGTGGCAGATACAAAGAAAATCATTTGAAAAGTGAGGAGGATTCTGTAGAGGACTATTGGCGTCTTACTCACTATTATAGTCGTTATAAGGCTCATATTGGTTCGTTGAAGATTGAAGCATCTGAATCGAAGCAAAAAATACTTGATAAAGTCCATAGCCTTGAATCAAAGGAGTTCCAGTTAAAAGATTTCAGCTGGGCAATGAGTGGATTTTATAGACTCGCCTTATCAAGGCGAGTTCTCGCCTGTTCCTATCCATTTGCATACTACTATTTTGGAGCTCTGTTTGCAAATGAAATAACAAAAGAAGAACGCGAAATAAAACAGAACCTTTTTGAGGATCAACAGCAGCAACTTGAAACAAATATCGAAAGACTTTCAATGTTCTTGGAAGAGCCATTTGGTAGCTATGCTGAAGATAAGCTTGTTGAGACAAGAATGAAGATTATTACTCTCTCCACAGTAACTGATGACCTCTGCAAAAACTT............................................................................GTACGAGTGCATTGACAACGATTTGCTAGTTCCTCTACAACAAGCAACTCATACAATAGTTCGTTATAGATCCAATGGTGTGGAAAAAGCATCAGAACTATAGGTAGGTACAGATATACTATGTAATGCTTCTTTACTATTGAGCGCGACTGCAGGTTGCATTGAACGTTGATCATTTGAATCGCGTTGTTCTGGCTTGATG---CTTCCAACTTCTTGTTAAAACATTATCAATCAATTCAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U325051" ref_strand="+" ref_description="SGN-U325051        Tomato 200607 #1 [5 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, contains Pfam profile PF04765: Protein of unknown function (DUF616) | chr5:17120152-17123192 REVERSE | Aliases: MJB21.3, MJB21_3(evalue: 2e-158, score=556) genbank/nr: gi|10177269|dbj|BAB10622.1| gb|AAC32911.1~gene_id:MJB21.3~similar to unknown protein [Arabidopsis thaliana](evalue: 1e-156, score=556)">
      <seq>aagctactgacgacgtcgtctcgactgcactgctaaatctccgtctagtcgccgccgttcaatgtcgtcatcgtcgtcgatgttaaacaacagtgtctccattactgtctccgacgacgagcccgacgaatttgcaaacaagcttagggcacgagctcgtaggaagagaaagaaatatgccctccgaggccaaactggtttctctcatattgtcctgaaaaagctcctcaggtggtggccttttctgctattcttacttgcagcaggtcttcttatctttgaagcctctcgaattggaagaagacctagttcggttgttaaaaattcgaatccagtgactggaaataaaactgataaggttgttgagaagaaaccgccgacgaacttgaatcgccttgatctagtgactcatgtcgtgcatggagttagagaaccttgcttgaagttactaccagctgaaggacttgagcatcttgatttccccatggataaagtacctgccgatcctattaaacgggtggtatacatcacagaggccaatcctgcttctctagatgatggaatgccatatgagctacacttgggggcgtcaagatttaatttattcacaggaaaccaaactctcaagcaaagggatgaaagttttaaggtgaaaggagcgggtgcatccatccactgtggtttttacagtgataaaggaggctttaggatttctgttgaagatagaagttacatggaatcctgcaaagctgtggtgtcaacttgtgcatttggtggtggagatgatctctatcaacctataggaatgtcagagtcatctctcaagaaggtttgctttgtggctttttgggatgaaattacacttgcatcacaagaggcagatggtcataaagttggtgatgaccgttacatcggaaagtggcgcatcatcctggttaagaatctaccattcacagaccaaaggttgaatggtaaaatcccaaagatgctggcccatcgtctctttccaagttctagatattccatttgggtagactcaaagtcccaacttaggagggatccgttgggtgtgttggaggctctgctttggcgttcaaactctgtactagcaatctcggaacatggagctcggagtagtgtgtatgatgaggcaaaggctgttgtcaagaaaaataaagccactccagaggaagtggccgtgcagatagctcagtaccgtcaagatggactccccgaagataagagattcaatgggaaaaaagctctatctgaggcttcaattattgtgagagagcacaccccatcaactaatctgctcatgtgcttatggttcaatgaggtggttcgctttacatcccgtgatcaactgagttttccatatgtcctttggcggtttaaagagttcaagaatatcaacatgtttcctgtttgtacacgcaaggatctcgtcaatagcatgggtcacataagaaaagcaaagcctctaacaggttgatgtatattcttggtttgcacgagaatggatagccgaaacaacaacacccagtctttctccaagtttcaagcatatttgcttcctctgtgatatgtgctaatgacattcaatagagagatcagataggattagcatattcctatttgttcttcagaattcaaagggcactgtttttccgaagccctggtgggaatgggatagagagagcccgaaaaggtttcatcgaacgaaagaagaaaaatgcagggatggtatgttgtgcatttgaacaaactggccttctttaggagggtcttttttttaacctatttataattcttttgttgacctacgtacactgttaaaattgtggtgagttttatcaaatgtgaagcaccaaatttttagctctcttgaattagtgcaagatttgctgtaaagtatttgattggatatttagttactcaattgtatgtgaaaacttagcactatgttgtgtctagagtgagtaacatttctatacaaactaaaaaaaagaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0223O22.1" temp_strand="+" temp_description="C04HBa0223O22.1  CU459025.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0223O22 sequenced_by:sanger upload_account_name:uk">
        <position start="47229" stop="51948"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47529" g_stop="47962" g_length="434"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="434" r_length="434" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47963" i_stop="49312" i_length="1350">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49313" g_stop="49527" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="435" r_stop="649" r_length="215" r_score="0.981"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="49528" i_stop="49635" i_length="108">
            <donor d_prob="0.070" d_score="1.00"/>
            <acceptor a_prob="0.957" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="49636" g_stop="49815" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="650" r_stop="829" r_length="180" r_score="0.994"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="49816" i_stop="49970" i_length="155">
            <donor d_prob="0.911" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="49971" g_stop="50126" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="830" r_stop="985" r_length="156" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="50127" i_stop="50467" i_length="341">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.834" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="50468" g_stop="50744" g_length="277"/>
          <reference_exon_boundary r_type="cDNA" r_start="986" r_stop="1262" r_length="277" r_score="0.989"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="50745" i_stop="50895" i_length="151">
            <donor d_prob="0.757" d_score="0.98"/>
            <acceptor a_prob="0.833" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="50896" g_stop="51660" g_length="765"/>
          <reference_exon_boundary r_type="cDNA" r_start="1263" r_stop="2015" r_length="753" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0223O22.1" gen_strand="+" ref_id="SGN-U325051" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>2027</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0223O22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U325051" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47529" e_stop="47962"/>
          <exon e_start="49313" e_stop="49527"/>
          <exon e_start="49636" e_stop="49815"/>
          <exon e_start="49971" e_stop="50126"/>
          <exon e_start="50468" e_stop="50744"/>
          <exon e_start="50896" e_stop="51660"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCTACTGACGACGTCGTCTCGACTGCACTGCTTAATCTCCGTCTAGTCGCCGCCGTTCAATGTCGTCATCGTCGTCGATGTTAAACAACAGTGTCTCCATTACTGTCTCCGACGACGAGCCCGACGAATTTGCAAACAAGCTTAGGGCACGAGCTCGTAGGAAGAGAAAGAAATATGCCCTCCGAGGCAAAACTGGTTTCTCTCATATTGTCCTGAAAAAGCTCCTTAGGTGGTGGCCTTTTCTGCTATTCTTACTTGCAGCAGGTCTTCTTATCTTTGAAGCCTCTCGAATTGGAAGAAGACCTAGTTCGGTTGTTAAAAATTCGAATCCAGTGACTGGAAATAAAACTGATAAGGTTGTTGAGAAGAAACCGCCGACGAACTTGAATCGCCTTGATCTAGTGACTCATGTCGTGCATGGAGTTAGAGAACGTGAGTTTCTTTTCGCAATATGATCTAAATTATCTTAGTGCCTAATTGCCTTTTGCTATGATAGCAGTTTATGTAAAATGTGCACATTACTTGCATTATTGAATTTCACAGCTTGTAGTTATTTTAGGATTGGCCTGCTTGAAATATGCATGTCTGTAGTCTTTTGTTCAGTATCTGATTAGAACTTATGAATGATACTGATTGTTATATCTATAAATTGATGAATCTAATGCTAGGTATTAGTACAATGATAAAAATCTGGTCCTTACTATTTCAGTTGCCTTATTCAGAATCTTCCACTCCGAAACGATATCCCTTGGACTTTACCAAGCTAGAAATTGTTCATGATCCAATTTGAGCATCTCTACAGGATAGACCTCCATAGAAAGAGGGCTGAGCGTTGTGAGTTGGGATACTGATCCATATAGAACACTAAAAAGTTAAAATTCAGTTGCAACTGTCTTTCTGAGAATAAAAATGTGTTTCAAACGAATAGAACACTAAAGAATTGTTTTGGTCAATACAACAGTTGTCTTCATTATGTACACTGAGATGCATATACTTGCCTTGGAGAGACTTAAAATGATCTGTACTCAAAATAGAGATAATTAAATTCTCTATGTGAAGATATAAATGTACCCTTCCTTGTGTTCTAAATAACCTTGATTTGTTCTTAGAAGAAAGAGACTATACTTGTACAAAAAAGAATATGCTCATCAAGTAGCCTGACGGAACTGGTTGGAACTGCATCTGTCTAAATATGTAACCTTTGTCAGCCAGAACATGTTAACGGCTGCGTTGCTTGGAAACACAGATAGCAGTTATAACTCCTTGCCTCTTCATAAAAGCCGATAGGACTCTTCAGCTTTCATTAACAACCCTTTAGGTGGTTTCGTCTGAGGCATCTGAAGGGTTATTTTTTTCATTCACCTAGCAACTGAATTTTCTCAAGGGCATGACAATTGGATCTAGTCTCTGTTCTCTGCTTACCCCAAATATACTTTAATTAGGAAGCCAAACCTCAAAAAGTTGACCAAATGAACCAATCTCAAGCTACATTCTCTCCCTCCAGTAGAACAAATGACTGTGTAGTCAAGTTCTCTATCAATCACGAGAAAATCAAATCCAAATGATTCTAGGAGTTACTATATGAGAATCTAAGATATAGAAAGAATCAGAAATTTGGTACTAAGGTGATCTATTTGCCATATGAGTAGATCATTTGGCTTTTCTTGGGGTAAAACTATTGTATTCAGCACAGCTTTGTGGTTAATTACATAGCAATTGTCAAAGTGCTATATTGTTTGACCCATTGTCTTCAATACTGTGTAACATAACATGGATTCGCAGCTTGCTTGAAGTTACTACCAGCTGAAGGACTTGAGCATCTTGATTTCCCCATGGATAAAGTACCTGCCGATCCTATTAAACAGGTGGTATACATCACAGAGGCCAATCCTGCTTCTCTAGATGATGGAATGCCATTTGAGCAACACTCGGGGGCGTCAAGATTTAATTTATTCACAGGAAACCAAACTCTCAAGCAAAGGGATGAAAGTTTTAAGGTTGTCGACCCGCGTCTTGCTTTTTGGTGATCACCTATTTATCTGTGAAATAATTTATGTATTTCTCTTTCTTCTTCTTTTGACAATTTTGCTTAAGCATTATCTCAGGTGAAAGGAGCGGGTGCATCCATCCACTGTGGTTTTTACAGTGATAAAGGAGGCTTTAGGATTTCTGTTGAAGATAGAAGTTATATGGAATCCTGCAAAGCTGTGGTGTCAACTTGTGCATTTGGTGGTGGAGATGATCTCTATCAACCTATAGGAATGTCAGAGTCATCTCTCAAGAAGGTTATTTTTTGGGATTTTTAATGCTCATGATTGATTTCCGGTCTAAAGTTTCCACTATGTAAAATTACAATTAAATCACAATGTAGTTGGTTTGGAGATTTAAAGTGGTGCTTGACACCTTAGTTAATTTATGTAGTTAAAATTAAATGATGCAGGTTTGCTTTGTGGCTTTTTGGGATGAAATTACACTTGCATCACAAGAGGCAGATGGTCATAAAGTTGGTGATGACCGTTACATCGGAAAGTGGCGCATCATCCTGGTTAAGAATCTACCATTCACAGACCAAAGGTTGAATGGTAAAATCCCAAAGGTATGCTTGTTGCCCGATTCCTCAATTTCTTGTATGCTTTTCCATTTTACAATGAACATATCCTAATACTTAAAGTGGAACTTCTAGCAATCTTGTCCTACTCCCGATATTCTTCTCCATGAGTCGTCGAGAAATATGGTGCCTTACAAAGTTGAAGTGTGATGAAGCAAATTGGAATGATGAACCAATTTTGAAGATTAAAAATGTCTGGAAAAGAAAATTTGTTGTCTTTTAATACATCCTCTTAAGATTTAGAAGTATGAGGGTTGCATCAGTACGATTGTGAATATTTTACTAGCGAAATGATTTATGAGTATTTAATCCATGTCTAATTTAATCAGATGCTGGCCCATCGTCTCTTTCCAAATTCTAGATATTCCATTTGGGTAGACTCAAAGTCCCAACTTAGGAGGGATCCATTGGGTGTGTTGGAGGCTCTGCTTTGGCGTTCAAACTCTGTACTAGCAATCTCGGAACATGGAGCTCGGAGTAGTGTGTATGATGAGGCAAAGGCTGTTGTCAAGAAAAATAAAGCCACTCCAGAGGAAGTGGCCGTGCAGATAGCTCAGTACCGTCAAGATGGACTCCCCGAGGATAAGAGATTCAATGGGAAAAAAGGTAGAATTTCTCGTCCTTGTCAGCTGAAGTGAAGCATATACCGTGATTGTTATCCACTGCATAATTATAGTACTGCTATTCCAAAATTGTTCAAATGAGATGATTGTATTTTAATCGGTAAATCATTCTCACACTCACTATATCGGTGCAGCTCTATCTGAGGCTTCAATTATTGTGAGAGAGCACACCCCATCAACTAATCTGCTCATGTGCTTATGGTTCAATGAGGTGGTTCGCTTTACATCCCGTGATCAACTGAGTTTTCCATATGTCCTTTGGCGGTTTAAAGAGTTCAAGAATATCAACATGTTTCCTGTTTGTACACGCAAGGATCTCGTCAATAGCATGGGTCACATAAGAAAAGCAAAGCCTCTAACAGGTTGATGTATATTCTTGGTTTGCACGAGAATGGATAGCCGAAACAACAACACCCAGTCTTTCTCCAAGTTTCAAGCATATTTGCTTCCTCTGTGATATGTGCTAATGACATTCAATAGAGAGATCAGATAGGATTAGCATATTCCTATTTGTTCTTCAGAATTCAAAGGGCACTGTTTTTTCGAAGCCCTGGTGGGAATGGGATAGAGAGAGCCCGAAAAGGTTTCATCGTACGAAAGAAGAAAAATGCAGTGATGGTATGTTGTGCATTTGAACAAACTAGCCTTCTTTAGGAGGGTCTTTTTTTTAACCTATTTATAATTCTTTTGTTGACCTACGTACACTGTTAAAATTGTGGTGAGTTTTATCAAATGTGAAGCACCAAATTTTTAGCTCTCTTGAATTAGTGCAAGATTTGCTGTAAACTATCATGTAAAGTATTTGATTGGATATTTAGTTACTCAATTGTATGTGAAAACTTAGCACTATGTTGTGTCTAGAGTGAGTAACATTTCTATACAAACTACCCCTTTGTGTA</genome_strand>
        <mrna_strand>AAGCTACTGACGACGTCGTCTCGACTGCACTGCTAAATCTCCGTCTAGTCGCCGCCGTTCAATGTCGTCATCGTCGTCGATGTTAAACAACAGTGTCTCCATTACTGTCTCCGACGACGAGCCCGACGAATTTGCAAACAAGCTTAGGGCACGAGCTCGTAGGAAGAGAAAGAAATATGCCCTCCGAGGCCAAACTGGTTTCTCTCATATTGTCCTGAAAAAGCTCCTCAGGTGGTGGCCTTTTCTGCTATTCTTACTTGCAGCAGGTCTTCTTATCTTTGAAGCCTCTCGAATTGGAAGAAGACCTAGTTCGGTTGTTAAAAATTCGAATCCAGTGACTGGAAATAAAACTGATAAGGTTGTTGAGAAGAAACCGCCGACGAACTTGAATCGCCTTGATCTAGTGACTCATGTCGTGCATGGAGTTAGAGAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGCTTGAAGTTACTACCAGCTGAAGGACTTGAGCATCTTGATTTCCCCATGGATAAAGTACCTGCCGATCCTATTAAACGGGTGGTATACATCACAGAGGCCAATCCTGCTTCTCTAGATGATGGAATGCCATATGAGCTACACTTGGGGGCGTCAAGATTTAATTTATTCACAGGAAACCAAACTCTCAAGCAAAGGGATGAAAGTTTTAAG............................................................................................................GTGAAAGGAGCGGGTGCATCCATCCACTGTGGTTTTTACAGTGATAAAGGAGGCTTTAGGATTTCTGTTGAAGATAGAAGTTACATGGAATCCTGCAAAGCTGTGGTGTCAACTTGTGCATTTGGTGGTGGAGATGATCTCTATCAACCTATAGGAATGTCAGAGTCATCTCTCAAGAAG...........................................................................................................................................................GTTTGCTTTGTGGCTTTTTGGGATGAAATTACACTTGCATCACAAGAGGCAGATGGTCATAAAGTTGGTGATGACCGTTACATCGGAAAGTGGCGCATCATCCTGGTTAAGAATCTACCATTCACAGACCAAAGGTTGAATGGTAAAATCCCAAAG.....................................................................................................................................................................................................................................................................................................................................................ATGCTGGCCCATCGTCTCTTTCCAAGTTCTAGATATTCCATTTGGGTAGACTCAAAGTCCCAACTTAGGAGGGATCCGTTGGGTGTGTTGGAGGCTCTGCTTTGGCGTTCAAACTCTGTACTAGCAATCTCGGAACATGGAGCTCGGAGTAGTGTGTATGATGAGGCAAAGGCTGTTGTCAAGAAAAATAAAGCCACTCCAGAGGAAGTGGCCGTGCAGATAGCTCAGTACCGTCAAGATGGACTCCCCGAAGATAAGAGATTCAATGGGAAAAAAG.......................................................................................................................................................CTCTATCTGAGGCTTCAATTATTGTGAGAGAGCACACCCCATCAACTAATCTGCTCATGTGCTTATGGTTCAATGAGGTGGTTCGCTTTACATCCCGTGATCAACTGAGTTTTCCATATGTCCTTTGGCGGTTTAAAGAGTTCAAGAATATCAACATGTTTCCTGTTTGTACACGCAAGGATCTCGTCAATAGCATGGGTCACATAAGAAAAGCAAAGCCTCTAACAGGTTGATGTATATTCTTGGTTTGCACGAGAATGGATAGCCGAAACAACAACACCCAGTCTTTCTCCAAGTTTCAAGCATATTTGCTTCCTCTGTGATATGTGCTAATGACATTCAATAGAGAGATCAGATAGGATTAGCATATTCCTATTTGTTCTTCAGAATTCAAAGGGCACTGTTTTTCCGAAGCCCTGGTGGGAATGGGATAGAGAGAGCCCGAAAAGGTTTCATCGAACGAAAGAAGAAAAATGCAGGGATGGTATGTTGTGCATTTGAACAAACTGGCCTTCTTTAGGAGGGTCTTTTTTTTAACCTATTTATAATTCTTTTGTTGACCTACGTACACTGTTAAAATTGTGGTGAGTTTTATCAAATGTGAAGCACCAAATTTTTAGCTCTCTTGAATTAGTGCAAGA-TT--TG--------C-TGTAAAGTATTTGATTGGATATTTAGTTACTCAATTGTATGTGAAAACTTAGCACTATGTTGTGTCTAGAGTGAGTAACATTTCTATACAAACTAAAAAAAAGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U325614" ref_strand="+" ref_description="SGN-U325614        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr4:10574779-10576439 REVERSE | Aliases: T5K18.170, T5K18_170(evalue: 2e-34, score=143) genbank/nr: gi|50918527|ref|XP_469660.1| unknown protein [Oryza sativa (japonica cultivar-group)] >gi|31126772|gb|AAP44691.1| unknown protein [Oryza sativa (japonica cultivar-group)] (evalue: 8e-44, score=180)">
      <seq>aatggcgataaatggtagattgttacgtacctctaagcaaatgggcttaggtaacaatattggtggccagaatcagtattattctttgacgaataattattcgttacgatttaaatgtttgagtaaaggtagacttattggcggagcagagaagaaggtagtagttgtagcaactaaggctgttggtactgcggttgtatctgaaccaattactacacaaaattggaagatttcagatgtaagtttagtcgcagataatgtatcagatctcatatttcaaaaattgaaaaatttactcaaacaaatgccgcagaaattgcatcatttacagtcctccattgaaaagggtattttggattgccggttcttcagtcttttagcagttgcagggacattgattggttcattattatgctttattgagggttgttacttaatcatagagtcatacatccactattttatcgcaatctcacataaatcagaccttggacatgtagtgcagctattaatcgaagctatcgatatgtttctattggggactgctatgcttacatttggaatgggattgtatgtcatgtttgtgggatcaagaaatattaatgttaaaggagatgatgatgatcaattgtcaggcaaaaagttgtattattttcaaacacttccatcattaatgggaatgaaatcagtaatgcaagcaaaagcaagaataggacatgcacttataatgttacttcaagttggagtattggagaagttcaagaacatacctgtggttaatggattggatcttgcttgttttgctgctgctgtttttgtttcatctatttgtgttttcattctttctaggcttgctgccactaacacaaaggctggagactaagaaaaatgcacatttttacactatatgtataaagcaagaaaaaaaaattataagcaaaaaataggtcttaggacttgttgtagttggccttattatttaacataaatattctttcaatttgaacaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0223O22.1" temp_strand="-" temp_description="C04HBa0223O22.1  CU459025.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0223O22 sequenced_by:sanger upload_account_name:uk">
        <position start="53961" stop="51490"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53661" g_stop="53316" g_length="346"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="346" r_length="346" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53315" i_stop="52680" i_length="636">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52679" g_stop="52602" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="347" r_stop="424" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52601" i_stop="52509" i_length="93">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.032" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52508" g_stop="52409" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="425" r_stop="524" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52408" i_stop="52285" i_length="124">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="52284" g_stop="51787" g_length="498"/>
          <reference_exon_boundary r_type="cDNA" r_start="525" r_stop="1021" r_length="497" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0223O22.1" gen_strand="-" ref_id="SGN-U325614" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>1022</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0223O22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U325614" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53661" e_stop="53316"/>
          <exon e_start="52679" e_stop="52602"/>
          <exon e_start="52508" e_stop="52409"/>
          <exon e_start="52284" e_stop="51787"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGGCGATAAATGGTAGATTGTTACGTACCTCTAAGCAAATGGGCTTAGGTAACAATATTGGTGGCCAGAATCAGTATTATTCTTTGACGAATAATTATTCGTTACGATTTAAATGTTTGAGTAAAGGTAGACTTATTGGCGGAGCAGAGAAGAAGGTAGTAGTTGTAGCAACTAAGGCTGTTGGTACTGCGGTTGTATCTGAACCAATTACTACACAAAATTGGAAGATTTCAGATGTAAGTTTAGTCGCAGATAATGTATCAGATCTCATATTTCAAAAATTGAAAAATTTACTCAAACAAATGCCGCAGAAATTGCATCATTTACAGTCCTCCATTGAAAAGGTGTGACTTTTCTTTAATTTTAAGTCTTAATTTATAATTGCTTATGGTAAATATGATTTGTGTAATCACAGTGTTGAAATTATTCCAAGTATTACTTGCTGGAGTACAATTTTTTTCCTATTCACTAGCCGAGACTAACACATATCCAATAATTACATCACGTATTTGATTTTGACAGATTACTAAACTTGTTGAGTTTTTTCTCTTCAGGTACCTCAACGATGTCATTTTCTTATTGAATCATTGAACCACCCATAATTTCTTCCTATAGTAAATGCCTTCAATTGTGTTCGTATTATAATGATTTTGATTGAAGAAATGAGTCTCATTTGTTTTTCTGATGTGATCAAATAACTTGAAGTGAAACACAATTATTCTCAAACAGTTTCACTATCAATTGGACTAATGAGTTTTGAAAATCTTCTATCAATATATCTTACAAAATTTGGTTCCACATCAGCCAACAGTGAACAAATTATGAATGGTTCAACGAATCAATAGGAAAATAACATAGTTGAGGTACCTGAGCAGATAAAACTCAACAAGTTTTAGAGATTTGTTTATGTATTTGGCCTTTAAACAGATCAAGTTTGTTTTTTCCATTTTTTGATTGGATATTGGAACTCTGTTTTGCAGGGTATTTTGGATTGCCGGTTCTTCAGTCTTTTAGCAGTTGCAGGGACATTGATTGGTTCATTATTATGCTTTATTGAGGTATAATATATTAGTACTAATTACTAGTATTATTATTTTATCATGAAAAAAAATCTGATTTTATGCAATTTTAAGACTAATAAATATTCTCAGGGTTGTTACTTAATCATAGAGTCATACATCCACTATTTTATCGCAATCTCACATAAATCAGACCTTGGACATGTAGTGCAGCTATTAATCGAAGCTATCGGTATGTTTTCCCTCTCTTAAACGTTAAAATTATTAATCGAGAACTGAATGAAACAATTGTTTACATTATCAGCATAAAGAAGTTAAACTGTAACCGAATAACGTTCTTTTTTTTTTTTTTTCAGATATGTTTCTATTGGGGACTGCTATGCTTACATTTGGAATGGGATTGTATGTCATGTTTGTGGGATCAAGAAATATTAATGTTAAAGGAGATGATGATGATCAATTGTCAGGCAAAAAGTTGTATTATTTTCAAACACTTCCATCATTAATGGGAATGAAATCAGTAATGCAAGCAAAAGCAAGAATAGGACATGCACTTATAATGTTACTTCAAGTTGGAGTATTGGAGAAGTTCAAGAACATACCTGTGGTTAATGGATTGGATCTTGCTTGTTTTGCTGCTGCTGTTTTTGTTTCATCTATTTGTGTTTTCATTCTTTCTAGGCTTGCTGCCACTAACACAAAGGCTGGAGACTAAGAAAAATGCACATTTTTACACTATATGTATAAAGCAAGAAAAAAAAATTATAAGCAAAAAATAGGTCTTAGGACTTGTTGTAGTTGGCCTTATTATTTAACATAAATATTCTTTCAATTTGTAACAATTAAATACATTT</genome_strand>
        <mrna_strand>AATGGCGATAAATGGTAGATTGTTACGTACCTCTAAGCAAATGGGCTTAGGTAACAATATTGGTGGCCAGAATCAGTATTATTCTTTGACGAATAATTATTCGTTACGATTTAAATGTTTGAGTAAAGGTAGACTTATTGGCGGAGCAGAGAAGAAGGTAGTAGTTGTAGCAACTAAGGCTGTTGGTACTGCGGTTGTATCTGAACCAATTACTACACAAAATTGGAAGATTTCAGATGTAAGTTTAGTCGCAGATAATGTATCAGATCTCATATTTCAAAAATTGAAAAATTTACTCAAACAAATGCCGCAGAAATTGCATCATTTACAGTCCTCCATTGAAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATTTTGGATTGCCGGTTCTTCAGTCTTTTAGCAGTTGCAGGGACATTGATTGGTTCATTATTATGCTTTATTGAG.............................................................................................GGTTGTTACTTAATCATAGAGTCATACATCCACTATTTTATCGCAATCTCACATAAATCAGACCTTGGACATGTAGTGCAGCTATTAATCGAAGCTATCG............................................................................................................................ATATGTTTCTATTGGGGACTGCTATGCTTACATTTGGAATGGGATTGTATGTCATGTTTGTGGGATCAAGAAATATTAATGTTAAAGGAGATGATGATGATCAATTGTCAGGCAAAAAGTTGTATTATTTTCAAACACTTCCATCATTAATGGGAATGAAATCAGTAATGCAAGCAAAAGCAAGAATAGGACATGCACTTATAATGTTACTTCAAGTTGGAGTATTGGAGAAGTTCAAGAACATACCTGTGGTTAATGGATTGGATCTTGCTTGTTTTGCTGCTGCTGTTTTTGTTTCATCTATTTGTGTTTTCATTCTTTCTAGGCTTGCTGCCACTAACACAAAGGCTGGAGACTAAGAAAAATGCACATTTTTACACTATATGTATAAAGCAAGAAAAAAAAATTATAAGCAAAAAATAGGTCTTAGGACTTGTTGTAGTTGGCCTTATTATTTAACATAAATATTCTTTCAATTTG-AACAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U325615" ref_strand="+" ref_description="SGN-U325615        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr4:10574779-10576439 REVERSE | Aliases: T5K18.170, T5K18_170(evalue: 5e-19, score=90.9) genbank/nr: gi|50918527|ref|XP_469660.1| unknown protein [Oryza sativa (japonica cultivar-group)] >gi|31126772|gb|AAP44691.1| unknown protein [Oryza sativa (japonica cultivar-group)] (evalue: 1e-22, score=108)">
      <seq>taaatggtagattgttacgtacctctaagcaaatgggcttaggtaacaataatggtggccagaatcagtattattctttgatgaataattattcgttacgatttaaatgtttgaacaaaggtagacagaaggtagtagtagtagcaactaaggctgttggtacagcggttgtatctgaaccaattactacacaaaattggaagatttcagatgtaagtttagtcgcagataatgtatcagatctcatatttcaaaacttgaaaaatttactcaaacaaatgccgcagaaattgcatcatttacagtcctccattgaaaagggtattttggattgccggttcttcagtcttttagcagttgcagggacattgattggttcattattatgctttattgagggttgttacttaatcatagagtcatacatccactattttatcgcaatctcacataaatcagaccttggacatgtagtgcagctattaatcgaagctatcgatatgtttctattggggactgctatgcttacatttggaatgggattgtatgtcatgtttgtgggatcaagaaatattaatgttaaaggagatgatgatgatcaattttcaggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0223O22.1" temp_strand="-" temp_description="C04HBa0223O22.1  CU459025.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0223O22 sequenced_by:sanger upload_account_name:uk">
        <position start="53953" stop="51872"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53653" g_stop="53316" g_length="338"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="320" r_length="320" r_score="0.926"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53315" i_stop="52680" i_length="636">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52679" g_stop="52602" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="398" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52601" i_stop="52509" i_length="93">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.032" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52508" g_stop="52409" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="399" r_stop="498" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52408" i_stop="52285" i_length="124">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="52284" g_stop="52174" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="499" r_stop="609" r_length="111" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0223O22.1" gen_strand="-" ref_id="SGN-U325615" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>627</cumulative_length_of_scored_exons>
        <coverage percentage="1.026" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0223O22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U325615" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53653" e_stop="53316"/>
          <exon e_start="52679" e_stop="52602"/>
          <exon e_start="52508" e_stop="52409"/>
          <exon e_start="52284" e_stop="52174"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAATGGTAGATTGTTACGTACCTCTAAGCAAATGGGCTTAGGTAACAATATTGGTGGCCAGAATCAGTATTATTCTTTGACGAATAATTATTCGTTACGATTTAAATGTTTGAGTAAAGGTAGACTTATTGGCGGAGCAGAGAAGAAGGTAGTAGTTGTAGCAACTAAGGCTGTTGGTACTGCGGTTGTATCTGAACCAATTACTACACAAAATTGGAAGATTTCAGATGTAAGTTTAGTCGCAGATAATGTATCAGATCTCATATTTCAAAAATTGAAAAATTTACTCAAACAAATGCCGCAGAAATTGCATCATTTACAGTCCTCCATTGAAAAGGTGTGACTTTTCTTTAATTTTAAGTCTTAATTTATAATTGCTTATGGTAAATATGATTTGTGTAATCACAGTGTTGAAATTATTCCAAGTATTACTTGCTGGAGTACAATTTTTTTCCTATTCACTAGCCGAGACTAACACATATCCAATAATTACATCACGTATTTGATTTTGACAGATTACTAAACTTGTTGAGTTTTTTCTCTTCAGGTACCTCAACGATGTCATTTTCTTATTGAATCATTGAACCACCCATAATTTCTTCCTATAGTAAATGCCTTCAATTGTGTTCGTATTATAATGATTTTGATTGAAGAAATGAGTCTCATTTGTTTTTCTGATGTGATCAAATAACTTGAAGTGAAACACAATTATTCTCAAACAGTTTCACTATCAATTGGACTAATGAGTTTTGAAAATCTTCTATCAATATATCTTACAAAATTTGGTTCCACATCAGCCAACAGTGAACAAATTATGAATGGTTCAACGAATCAATAGGAAAATAACATAGTTGAGGTACCTGAGCAGATAAAACTCAACAAGTTTTAGAGATTTGTTTATGTATTTGGCCTTTAAACAGATCAAGTTTGTTTTTTCCATTTTTTGATTGGATATTGGAACTCTGTTTTGCAGGGTATTTTGGATTGCCGGTTCTTCAGTCTTTTAGCAGTTGCAGGGACATTGATTGGTTCATTATTATGCTTTATTGAGGTATAATATATTAGTACTAATTACTAGTATTATTATTTTATCATGAAAAAAAATCTGATTTTATGCAATTTTAAGACTAATAAATATTCTCAGGGTTGTTACTTAATCATAGAGTCATACATCCACTATTTTATCGCAATCTCACATAAATCAGACCTTGGACATGTAGTGCAGCTATTAATCGAAGCTATCGGTATGTTTTCCCTCTCTTAAACGTTAAAATTATTAATCGAGAACTGAATGAAACAATTGTTTACATTATCAGCATAAAGAAGTTAAACTGTAACCGAATAACGTTCTTTTTTTTTTTTTTTCAGATATGTTTCTATTGGGGACTGCTATGCTTACATTTGGAATGGGATTGTATGTCATGTTTGTGGGATCAAGAAATATTAATGTTAAAGGAGATGATGATGATCAATTGTCAG</genome_strand>
        <mrna_strand>TAAATGGTAGATTGTTACGTACCTCTAAGCAAATGGGCTTAGGTAACAATAATGGTGGCCAGAATCAGTATTATTCTTTGATGAATAATTATTCGTTACGATTTAAATGTTTGAACAAAGGTAGAC--A----------------GAAGGTAGTAGTAGTAGCAACTAAGGCTGTTGGTACAGCGGTTGTATCTGAACCAATTACTACACAAAATTGGAAGATTTCAGATGTAAGTTTAGTCGCAGATAATGTATCAGATCTCATATTTCAAAACTTGAAAAATTTACTCAAACAAATGCCGCAGAAATTGCATCATTTACAGTCCTCCATTGAAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATTTTGGATTGCCGGTTCTTCAGTCTTTTAGCAGTTGCAGGGACATTGATTGGTTCATTATTATGCTTTATTGAG.............................................................................................GGTTGTTACTTAATCATAGAGTCATACATCCACTATTTTATCGCAATCTCACATAAATCAGACCTTGGACATGTAGTGCAGCTATTAATCGAAGCTATCG............................................................................................................................ATATGTTTCTATTGGGGACTGCTATGCTTACATTTGGAATGGGATTGTATGTCATGTTTGTGGGATCAAGAAATATTAATGTTAAAGGAGATGATGATGATCAATTTTCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U341894" ref_strand="+" ref_description="SGN-U341894        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | lipoyltransferase (LIP2p), identical to lipoyltransferase (LIP2p) (Arabidopsis thaliana) GI:15887052; supporting cDNA gi:15887051:dbj:AB072390.1: | chr4:15114340-15115639 FORWARD | Aliases: F6I18.40, F6I18_40(evalue: 6e-85, score=310) genbank/nr: gi|18417727|ref|NP_567866.1| LIP2p lipoyltransferase [Arabidopsis thaliana] gi|15887052|dbj|BAB69449.1| lipoyltransferase [Arabidopsis thaliana](evalue: 4e-83, score=310)">
      <seq>cagaaatggttgttttcacaaattcgatgttctgttcaattccgccatggaaactgagaaacccatcgaagattaagcaacattctatactcaaaagcccgactttgacaagctgtcaagccaaaagatgagttagttccatatgctaaagcatggtcctggcaaaagactattgttgatgagaggaaagcacaaattgaaaggaatgaggatcttgctgacacactcattgtgttgcagcatcagccggtttatccgttgggtactggtagctctgaagagaatatacattttgatgtaaagaatgctccttttgaattgtatcgaacagaacgtggtggtgaagttacttaccatggccctggtcagctagttatgtaccccatcatcaatcttcggtatcataagatggaccttcattggtacctcaggagccttgaggaggtgatcatacgagttctttcttcatcattttctatggaggcttcgagaattgatggcctaaccggtgtttgggttgggggtcagaaattagctgcaattggcattcgagtatctcaatgggtcacatatcatggcctggcactcaatgtcaccacagatctggcaccctttcaacagatagttccatgtgggatccgtgaccgtcaagttggaagcataaaggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0223O22.1" temp_strand="+" temp_description="C04HBa0223O22.1  CU459025.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0223O22 sequenced_by:sanger upload_account_name:uk">
        <position start="54986" stop="57021"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55286" g_stop="55424" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="130" r_length="130" r_score="0.928"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55425" i_stop="55534" i_length="110">
            <donor d_prob="0.977" d_score="0.84"/>
            <acceptor a_prob="0.489" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55535" g_stop="55773" g_length="239"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="369" r_length="239" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="55774" i_stop="56103" i_length="330">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.831" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="56104" g_stop="56254" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="370" r_stop="520" r_length="151" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="56255" i_stop="56572" i_length="318">
            <donor d_prob="0.993" d_score="0.98"/>
            <acceptor a_prob="0.980" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="56573" g_stop="56721" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="521" r_stop="669" r_length="149" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0223O22.1" gen_strand="+" ref_id="SGN-U341894" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>678</cumulative_length_of_scored_exons>
        <coverage percentage="1.013" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0223O22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U341894" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55286" e_stop="55424"/>
          <exon e_start="55535" e_stop="55773"/>
          <exon e_start="56104" e_stop="56254"/>
          <exon e_start="56573" e_stop="56721"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAAATGGTTGTTTTCACAAATTCGATGTTCTGTTCAATTCCGCCATGGAAACTGAGAAACCCATCGAAGATTAAGGAACATTCTAGTACAGCTATACTCAAAAGCCCGACTTTGACAAGCTGTCAAGCCAAAAGATGGTGAGATTTTCTTGTTGACATTTTGACAAACACTTGTTGTGCAATTTAAGGCTTTTCAGTTGATTAACTCTGTTTTGACTATAGCTGTGATTGTTATGATATGTACAAAGAGTTAGTTCCATATGCTAAAGCATGGTCCTGGCAAAAGACTATTGTTGATGAGAGGAAAGCACAAATTGAAAGGAATGAGGATCTTGCTGACACACTCATTGTGTTGCAGCATCAGCCGGTTTATACGTTGGGTACTGGTAGCTCTGAAGAGAATATACATTTTGATGTAAAGAAGGCTCCTTTTGAATTGTATCGAACAGAACGTGGTGGTGAAGTTACTTACCATGGCCCTGGTCAGGTACATTTCTGATTTCACTTGTTGCTACCTACTTACCCTGCTATACTGTTCTTGTTTTCGTAGTTTAGCCAAGTGTATAGGTTTTTTTTAAGTGCTTGATGTCATTGGTTCAACGGCTTGCAAAGTAAGGGGAAGTATCAGTAAATATGATATTTTGATGGGCTATGATTGGCAAGAGATTTTACGAAGTCCCGAATCAAATGTGGCTTTGACAAGACTGGTGTGTTATACTTCATTGGGTGGCTGTTTGTGTGTGGGATTAGGATAACTCGGGTGTTTGTTTAAGCTGTTACGTTTCTGACATAAAATTGCTTCTATCTGAAATTGTAGCTAGTTATGTACCCCATCATCAATCTTCGGTATCATAAGATGGACCTTCATTGGTACCTCAGGAGCCTTGAGGAGGTGATCATACGAGTTCTTTCTTCATCATTTTCTATGGAGGCTTCAAGAATTGATGGCCTAACCGGTGTTTGGGTTGGTAAGTACTGATTCTCCATATCATTTGGTTGGCCGTATCAGTCTTTTTCTGTGGTATTATCTGATATTTCTGAAAACGACTTGGGCGTTATGGTTTTAGAAAACCTTTTGTTAAGTTGATAGTTCATAAGATATTTCTTGTTTGAAGATTTCCCATGTGCCTAGGGGTGTATATGAATGGCACTTGTGACTTGACCTGCATAGTGCATTCGGCCATATTTGAAATCTGGTTACAGTATTAAACTGATCAACCGTTTGGTCGTACTGGATTTGTGGATTGAAGGGATGTAATATTTGATCCAACACTGTCTTCTTTCAGGGGGTCAGAAATTAGCTGCAATTGGCATTCGAGTATCTCAATGGGTCACCTATCATGGCCTGGCTCTCAATGTCACCACAGATCTGGCACCCTTTCAACAGATAGTTCCATGTGGGATCCGTGACCGTCAAGTTGGAAGCATAAAGGGA</genome_strand>
        <mrna_strand>CAGAAATGGTTGTTTTCACAAATTCGATGTTCTGTTCAATTCCGCCATGGAAACTGAGAAACCCATCGAAGATTAAGCAACATTCTA-T--A-C--T-C--AAAAGCCCGACTTTGACAAGCTGTCAAGCCAAAAGATG..............................................................................................................AGTTAGTTCCATATGCTAAAGCATGGTCCTGGCAAAAGACTATTGTTGATGAGAGGAAAGCACAAATTGAAAGGAATGAGGATCTTGCTGACACACTCATTGTGTTGCAGCATCAGCCGGTTTATCCGTTGGGTACTGGTAGCTCTGAAGAGAATATACATTTTGATGTAAAGAATGCTCCTTTTGAATTGTATCGAACAGAACGTGGTGGTGAAGTTACTTACCATGGCCCTGGTCAG..........................................................................................................................................................................................................................................................................................................................................CTAGTTATGTACCCCATCATCAATCTTCGGTATCATAAGATGGACCTTCATTGGTACCTCAGGAGCCTTGAGGAGGTGATCATACGAGTTCTTTCTTCATCATTTTCTATGGAGGCTTCGAGAATTGATGGCCTAACCGGTGTTTGGGTTG..............................................................................................................................................................................................................................................................................................................................GGGGTCAGAAATTAGCTGCAATTGGCATTCGAGTATCTCAATGGGTCACATATCATGGCCTGGCACTCAATGTCACCACAGATCTGGCACCCTTTCAACAGATAGTTCCATGTGGGATCCGTGACCGTCAAGTTGGAAGCATAAAGGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U318909" ref_strand="+" ref_description="SGN-U318909        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | allene oxide synthase (AOS) / hydroperoxide dehydrase / cytochrome P450 74A (CYP74A), identical to Allene oxide synthase, chloroplast precursor (Hydroperoxide dehydrase) (Cytochrome P450 74A) (SP:Q96242) {Arabidopsis thaliana} | chr5:17114823-17116623 REVERSE | Aliases: None(evalue: 0, score=662) genbank/nr: gi|7581989|emb|CAB88032.1| allene oxide synthase [Lycopersicon esculentum](evalue: 0, score=933)">
      <seq>ttgaactcaaccttcgcttgttgaacaaaagtcaagagttcaattcttgatttttttctaatagaaatggcatcaacttctctttctcttccttctcttaagctacaattcccctcgcatacatcatcatcttctcgtaaaaattcatcgtcttatcgtgttagtattcgtcccattcaggcttcggtgtctgagataccaccttacatttcatcaccatcacaatcaccatcgtcatcggcatcaccacctgttaaacaagcgaaactcccagcccgaaaagtccctggagattatggactaccattagttggtccatggaaagacagacttgattacttctacaatcagggcaaaaatgaattcttcaaatcaagaattcagaagcatcagtctactgtttttcgaacgaacatgccaccaggtccattcatttcattcaatccaaacgttgttgttttgctagatggtaaaagtttccccgtactttttgatgtatctaaagttgaaaaaaaggatcttttcactggtactttcatgccatccactgatctcacaggcggttatcgagttctatcctatcttgatccttctgaaccaaaccatgccaaattgaagaaactcatgttttatctcctttcatcacgacgcaatgaagttattccagagtttcacaatagctactccgagctatttgaaactctggaaaacgaactctccacgaaaggtaaagctgggctcaatgcagcaaatgatcaagctgcagttaacttcctggctaggtctttatatggcattaatcctcaagacaccgaacttggaaccgatggacctaagttgatcggaaaatgggtgctgttccagcttcatcctttgctaattctcggcctcccaaaggttcttgaagaccttgttatgcatactttcagacttccccctgccttggtgaaaaaagattaccagagattgtacaatttcttctacgaaaactcaacttcagttcttgatgaagcagaaaaaattggtatttctcgggaagaagcttgtcataatttgctattcgcgacatgtttcaattcattcggaggaatcaaaatctttttcccgaatatgttgaaatggataggcagagcaggggctaaactccacagtcaattagcacaagaaattcgttcagtcatttcatcaaacagtgggaaggtcacaatggctgccatggaaaaaatgccactaatgaaatcagtagtctacgaatccctcagaattgaacctccggtagcatcacaatacggcagagcaaaacacgacatggtaattgaatcccatgacgcatcgttcgaaatcaaagaaggtgaactcctttatgggtttcaaccgtttgcaactaaagacccaaaaatcttcgatcgatcggaagaattcgtcgccgatcggttcatcggagaagaaggggagaagctgttgaaacacgtgttatggtcaaatgggtcggaaacagagaacccatcgataaataacaaacagtgtgccggaaaagacttcgtcgtactggtttcaagattgttgttggtcgaattgttcctccgatatgattcgtttgagattgaagtcggtgcatctccattaggagctgcaattaccttaacttctctgagaagagccagtttttgatgaacactggcttaattaagtaattagtaatcttgtttagtgtattatatttcattgttgtgttactaagaaataattaatttacagaacagagcatgccggccggcggcggtaattgaggaagaggccggtgatgtgtatagtttagtatagtaattattttttgttggaaaatggaatgtgtaactatgttaatgatcaatgtaatatgttgttctcaataaatacaacagttaattcacccctcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0223O22.1" temp_strand="+" temp_description="C04HBa0223O22.1  CU459025.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0223O22 sequenced_by:sanger upload_account_name:uk">
        <position start="64114" stop="66647"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64414" g_stop="66345" g_length="1932"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1928" r_length="1928" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0223O22.1" gen_strand="+" ref_id="SGN-U318909" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>1932</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0223O22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U318909" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64414" e_stop="66345"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAACTCAACCTTCGCTTGTTGAACAAAAGTCAAGAGTTCAATTCTTGATTTTTTTCTAATAGAAATGGCATCAACTTCTCTTTCTCTTCCTTCTCTTAAGCTACAATTCCCCTCGCATACATCATCATCTTCTCGTAAAAATTCATCGTCTTATCGTGTTAGTATTCGTCCCATTCAGGCTTCGGTGTCTGAGATACCACCTTACATTTCATCACCATCACAATCACCATCATCATCGTCATCACCACCTGTTAAACAAGCGAAACTCCCAGCCCAAAAAGTCCCTGGAGATTATGGACTACCATTAGTTGGTCCATGGAAAGACAGACTTGATTACTTCTACAATCAGGGCAAAAATGAATTCTTCAAATCAAGAATTCAGAAGCATCAGTCTACTGTTTTTCGAACGAACATGCCACCAGGTCCATTCATTTCATTCAATCCAAACGTTGTTGTTTTGCTAGATGGTAAAAGTTTCCCCGTACTTTTTGATGTATCTAAAGTTGAAAAAAAGGATCTTTTCACCGGTACTTTCATGCCATCCACTGATCTCACAGGCGGTTATCGAGTTCTATCCTATCTTGATCCTTCTGAACCAAACCATGCCAAATTGAAGAAACTCATGTTTTATCTCCTTTCATCACGACGCAATGAAGTTATTCCAGAGTTTCACAATAGCTACTCCGAGCTATTTGAAACTCTGGAAAACGAACTCTCCACGAAAGGTAAAGCTGGGCTCAATGCAGCAAATGATCAAGCTGCATTTAACTTCCTGGCTAGGTCTTTATATGGCATTAATCCTCAAGACACCGAACTTGGAACCGATGGACCTAAGTTGATCGGAAAATGGGTGCTGTTCCAGCTTCATCCTTTGCTAATTCTCGGCCTCCCAAAGGTTCTTGAAGACCTTGTTATGCATACTTTCAGACTTCCCCCTGCCTTGGTGAAAAAAGATTACCAGAGATTGTACAATTTCTTCTACGAAAACTCAACTTCAGTTCTTGATGAAGCAGAAAAAATTGGTATTTCTCGGGAAGAAGCTTGTCATAATTTGCTATTCGCGACATGTTTCAATTCATTCGGAGGAATCAAAATCTTTTTCCCGAATATGTTGAAATGGATAGGCAGAGCAGGGGCTAAACTCCACAGTCAATTAGCACAAGAAATTCGTTCAGTCATTTCATCAAACAGTGGGAAGGTCACAATGGCTGCCATGGAAAAAATGCCACTAATGAAATCAGTAGTCTACGAATCCCTCAGAATTGAACCTCCGGTAGCATCACAATACGGCAGAGCAAAACACGACATGGTAATTGAATCCCACGACGCATCATTCGAAATCAAAGAAGGTGAACTCCTTTATGGGTATCAACCATTTGCAACTAAAGACCCAAAAATCTTCGATCGATCGGAAGAATTCGTCGCCGATCGGTTCATCGGAGAAGAAGGGGAGAAGCTGTTGAAACACGTGTTATGGTCAAATGGGTCGGAAACTGAAAACGCATCGATAAATAACAAACAGTGTGCCGGAAAAGACTTCGTCGTACTGGTTTCAAGATTGTTGCTGGTCGAACTGTTCCTCCGATATGATTCGTTTGAGATTGAAGTCGGTGCATCTCCATTAGGAGCTGCAATTACCTTAACTTCTCTGAGAAGAGCCAGTTTTTGATGAACACTGGCTTAATTAAGAAATTAGTAATCTTGTTTAGTGTATTATATTTCATTGTTGTGTTATTAAGAAATAATTAATTTACAGAACAGAGCATGCCGGCCAGCCGGCGGCGGTAATTGAGGAAGAGGCCGGTGATGTGTATAGTTTAGTATAGTAAATATTTTTTGTTGGAAAATGGAATGTGTAACTATGTTAATGATCAATGTAATATGTTGTTCTCAATAAATACAATAGATAATTCACCCCTCCAAATTATAT</genome_strand>
        <mrna_strand>TTGAACTCAACCTTCGCTTGTTGAACAAAAGTCAAGAGTTCAATTCTTGATTTTTTTCTAATAGAAATGGCATCAACTTCTCTTTCTCTTCCTTCTCTTAAGCTACAATTCCCCTCGCATACATCATCATCTTCTCGTAAAAATTCATCGTCTTATCGTGTTAGTATTCGTCCCATTCAGGCTTCGGTGTCTGAGATACCACCTTACATTTCATCACCATCACAATCACCATCGTCATCGGCATCACCACCTGTTAAACAAGCGAAACTCCCAGCCCGAAAAGTCCCTGGAGATTATGGACTACCATTAGTTGGTCCATGGAAAGACAGACTTGATTACTTCTACAATCAGGGCAAAAATGAATTCTTCAAATCAAGAATTCAGAAGCATCAGTCTACTGTTTTTCGAACGAACATGCCACCAGGTCCATTCATTTCATTCAATCCAAACGTTGTTGTTTTGCTAGATGGTAAAAGTTTCCCCGTACTTTTTGATGTATCTAAAGTTGAAAAAAAGGATCTTTTCACTGGTACTTTCATGCCATCCACTGATCTCACAGGCGGTTATCGAGTTCTATCCTATCTTGATCCTTCTGAACCAAACCATGCCAAATTGAAGAAACTCATGTTTTATCTCCTTTCATCACGACGCAATGAAGTTATTCCAGAGTTTCACAATAGCTACTCCGAGCTATTTGAAACTCTGGAAAACGAACTCTCCACGAAAGGTAAAGCTGGGCTCAATGCAGCAAATGATCAAGCTGCAGTTAACTTCCTGGCTAGGTCTTTATATGGCATTAATCCTCAAGACACCGAACTTGGAACCGATGGACCTAAGTTGATCGGAAAATGGGTGCTGTTCCAGCTTCATCCTTTGCTAATTCTCGGCCTCCCAAAGGTTCTTGAAGACCTTGTTATGCATACTTTCAGACTTCCCCCTGCCTTGGTGAAAAAAGATTACCAGAGATTGTACAATTTCTTCTACGAAAACTCAACTTCAGTTCTTGATGAAGCAGAAAAAATTGGTATTTCTCGGGAAGAAGCTTGTCATAATTTGCTATTCGCGACATGTTTCAATTCATTCGGAGGAATCAAAATCTTTTTCCCGAATATGTTGAAATGGATAGGCAGAGCAGGGGCTAAACTCCACAGTCAATTAGCACAAGAAATTCGTTCAGTCATTTCATCAAACAGTGGGAAGGTCACAATGGCTGCCATGGAAAAAATGCCACTAATGAAATCAGTAGTCTACGAATCCCTCAGAATTGAACCTCCGGTAGCATCACAATACGGCAGAGCAAAACACGACATGGTAATTGAATCCCATGACGCATCGTTCGAAATCAAAGAAGGTGAACTCCTTTATGGGTTTCAACCGTTTGCAACTAAAGACCCAAAAATCTTCGATCGATCGGAAGAATTCGTCGCCGATCGGTTCATCGGAGAAGAAGGGGAGAAGCTGTTGAAACACGTGTTATGGTCAAATGGGTCGGAAACAGAGAACCCATCGATAAATAACAAACAGTGTGCCGGAAAAGACTTCGTCGTACTGGTTTCAAGATTGTTGTTGGTCGAATTGTTCCTCCGATATGATTCGTTTGAGATTGAAGTCGGTGCATCTCCATTAGGAGCTGCAATTACCTTAACTTCTCTGAGAAGAGCCAGTTTTTGATGAACACTGGCTTAATTAAGTAATTAGTAATCTTGTTTAGTGTATTATATTTCATTGTTGTGTTACTAAGAAATAATTAATTTACAGAACAGAGCATGCC-G---GCCGGCGGCGGTAATTGAGGAAGAGGCCGGTGATGTGTATAGTTTAGTATAGTAATTATTTTTTGTTGGAAAATGGAATGTGTAACTATGTTAATGATCAATGTAATATGTTGTTCTCAATAAATACAACAGTTAATTCACCCCTCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U318910" ref_strand="+" ref_description="SGN-U318910        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: | Symbol: None | allene oxide synthase (AOS) / hydroperoxide dehydrase / cytochrome P450 74A (CYP74A), identical to Allene oxide synthase, chloroplast precursor (Hydroperoxide dehydrase) (Cytochrome P450 74A) (SP:Q96242) {Arabidopsis thaliana} | chr5:17114823-17116623 REVERSE | Aliases: None(evalue: 2e-81, score=299) genbank/nr: gi|7581989|emb|CAB88032.1| allene oxide synthase [Lycopersicon esculentum](evalue: 6e-119, score=429)">
      <seq>gaacaaaagtcaagagttcaattcttgaatttttctaatagaaatggcatcaacttctctttctcttaagctacaattcccctcacatacatcatcatcttctcgtaaaaattcatcgtctcatcgtgttagtattcgtcccattcaggcttcggtgtctgagataccaccttacatttcatcaccatcaccatcaccaccaccggttaaacaagcgaaactcccagccagaaaagttcctggagattatggactaccattagttggtccatggaaagacagacttgattacttctacaatcagggcaaaaatgaatttttcaaatcaagaattcagaagcatcagtctactgtttttcgaacgaacatgccaccaggtccattcatttcattcaatccaaacgttgttgttttgctcgatggtaaaagtttccccgtactttttgatgtatctaaagttgaaaaaaaggatcttttcaccggtactttcatgccatccactgatctcacaggcggttatcgtgttctctcctatcttgatccttctgaaccaaaccatgccaaattgaagaaactcatgttttatctcctttcatcacgacgcaatgaagttattccagagtttcacaatagctactccgagctatttgaaactctggaaaacgaactctccacgaaaggtaaagctgggctcaatgcagcaaatgatcaagctgcatttaacttcctggctaggtctttatatggcattaatccctcagacaccgaacttggaaccgatggnnactagntgatcggaaaatgggtgctgttccagcttcatcctttgctaattctcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0223O22.1" temp_strand="+" temp_description="C04HBa0223O22.1  CU459025.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0223O22 sequenced_by:sanger upload_account_name:uk">
        <position start="64136" stop="65599"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64436" g_stop="65299" g_length="864"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="839" r_length="839" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0223O22.1" gen_strand="+" ref_id="SGN-U318910" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>864</cumulative_length_of_scored_exons>
        <coverage percentage="1.030" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0223O22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U318910" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64436" e_stop="65299"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACAAAAGTCAAGAGTTCAATTCTTGATTTTTTTCTAATAGAAATGGCATCAACTTCTCTTTCTCTTCCTTCTCTTAAGCTACAATTCCCCTCGCATACATCATCATCTTCTCGTAAAAATTCATCGTCTTATCGTGTTAGTATTCGTCCCATTCAGGCTTCGGTGTCTGAGATACCACCTTACATTTCATCACCATCACAATCACCATCATCATCGTCATCACCACCTGTTAAACAAGCGAAACTCCCAGCCCAAAAAGTCCCTGGAGATTATGGACTACCATTAGTTGGTCCATGGAAAGACAGACTTGATTACTTCTACAATCAGGGCAAAAATGAATTCTTCAAATCAAGAATTCAGAAGCATCAGTCTACTGTTTTTCGAACGAACATGCCACCAGGTCCATTCATTTCATTCAATCCAAACGTTGTTGTTTTGCTAGATGGTAAAAGTTTCCCCGTACTTTTTGATGTATCTAAAGTTGAAAAAAAGGATCTTTTCACCGGTACTTTCATGCCATCCACTGATCTCACAGGCGGTTATCGAGTTCTATCCTATCTTGATCCTTCTGAACCAAACCATGCCAAATTGAAGAAACTCATGTTTTATCTCCTTTCATCACGACGCAATGAAGTTATTCCAGAGTTTCACAATAGCTACTCCGAGCTATTTGAAACTCTGGAAAACGAACTCTCCACGAAAGGTAAAGCTGGGCTCAATGCAGCAAATGATCAAGCTGCATTTAACTTCCTGGCTAGGTCTTTATATGGCATTAATCCTCAAGACACCGAACTTGGAACCGATGGACCTAAGTTGATCGGAAAATGGGTGCTGTTCCAGCTTCATCCTTTGCTAATTCTCG</genome_strand>
        <mrna_strand>GAACAAAAGTCAAGAGTTCAATTCTTGA-ATTTTTCTAATAGAAATGGCATCAA-----C-TTCTC-T--TTCTCTTAAGCTACAATTCCCCTCACATACATCATCATCTTCTCGTAAAAATTCATCGTCTCATCGTGTTAGTATTCGTCCCATTCAGGCTTCGGTGTCTGAGATACCACCTTACATTTCAT---CA-C-C-ATCA-C--CATCA----C--CACCACCGGTTAAACAAGCGAAACTCCCAGCCAGAAAAGTTCCTGGAGATTATGGACTACCATTAGTTGGTCCATGGAAAGACAGACTTGATTACTTCTACAATCAGGGCAAAAATGAATTTTTCAAATCAAGAATTCAGAAGCATCAGTCTACTGTTTTTCGAACGAACATGCCACCAGGTCCATTCATTTCATTCAATCCAAACGTTGTTGTTTTGCTCGATGGTAAAAGTTTCCCCGTACTTTTTGATGTATCTAAAGTTGAAAAAAAGGATCTTTTCACCGGTACTTTCATGCCATCCACTGATCTCACAGGCGGTTATCGTGTTCTCTCCTATCTTGATCCTTCTGAACCAAACCATGCCAAATTGAAGAAACTCATGTTTTATCTCCTTTCATCACGACGCAATGAAGTTATTCCAGAGTTTCACAATAGCTACTCCGAGCTATTTGAAACTCTGGAAAACGAACTCTCCACGAAAGGTAAAGCTGGGCTCAATGCAGCAAATGATCAAGCTGCATTTAACTTCCTGGCTAGGTCTTTATATGGCATTAATCCCTCAGACACCGAACTTGGAACCGATGGNNACTAGNTGATCGGAAAATGGGTGCTGTTCCAGCTTCATCCTTTGCTAATTCTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U318054" ref_strand="+" ref_description="SGN-U318054        Tomato 200607 #1 [18 ESTs aligned] arabidopsis/peptide: | Symbol: None | transferase family protein, similar to elicitor inducible gene product EIG-I24 (Nicotiana tabacum) (gi:10798748); contains Pfam transferase family domain PF00248 | chr1:10078175-10080015 FORWARD | Aliases: F1K23.12, F1K23_12(evalue: 1e-141, score=500) genbank/nr: gi|10798748|dbj|BAB16426.1| elicitor inducible gene product EIG-I24 [Nicotiana tabacum](evalue: 0, score=756)">
      <seq>ttttaattttatatacaagaaaataacagcaattattgtaccggccggaaaaatggaagtaactaccggcgaaactaacacaatctatccatctaagccgcctttcacagaaaaccatgtccttcctctctcccatattgacaccgatcggaacctcaatttcactttccgatacctccgtgtctacgtcaatgacgacaccacatcagacccatatgaagttgtcacctcctccctctccgccgctctcgtccactactaccaattcgccggctctctccgccgtcgtccatcggacaaccgtctagagcttcactgtcaagtgggggatggcgttcccgtaattccgtcgacggtggattgtaccttggcttcaatgaactacctggatgatccggattataacttggctgagaagctggtacccgacccgagagatgaggaggcgttgacccgacccttgattttgcaagtgaaccgttttaagtgtggtgggtgggttttcggaacggcggttcatcacgccatgtgtgatggaatgggttcgacgctgttttttcatgctatggcggagattgctcgtggggagaaagggatgaagattgaaccggtgtgggaccggtcgaatttgcttggaccgaggaatcccccgcgagttgaatttccggttcatgagttcctcagtttggatagggattcgtgtccatacttggaatcaggtaaatcggcagttcgagagtgctttgaggtgaaagatgagtggttggatagactaaaggggtttcttcatgagcactcttcaggttcaaattatacaacttttgaagctttgggagctttcatatggcgagcaaaggcaaaggcttgtaaaatgtcagatgatgagacagtgaagtatgcttatctaaccaatatcagaagaagagtgaagccaccattgccagctggttactggggcaatggctgtgtgccaatatacgttcagctcctcgcaaaagacatcatcaatgaacctatctggaaagcagcagacgcgataaagaagagcaaggacatcatcacagatgagtatgttcgttcgttcattgattttcaggagctgcattatgttgaagggatcacatcagggaatagagtgagtgcatttacagattggcggcatgtaggccacgagacggttgattttggatggggtggccctgtgactgtctttcctctgtctagacacttagttgggagtgttgaaccttgctttttcttgccttattcttctgcaattcaaggtaagaaagatggtttcaaagttttggtctgtctgcaacaagaagccatgcctgttttcatggaagagatggaaaagttggagcatggacttgcttgattgattttactatatatatatgtgtgtgttatattaaactaataaaaacaacatttacaagtagagaccaaatttggcatatgtattactacattttcgactgctaaatgttctttcaagtaaattacaatgaagaaatgtaatcctttacaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0223O22.1" temp_strand="+" temp_description="C04HBa0223O22.1  CU459025.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0223O22 sequenced_by:sanger upload_account_name:uk">
        <position start="68691" stop="70988"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68991" g_stop="69845" g_length="855"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="855" r_length="855" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69846" i_stop="70007" i_length="162">
            <donor d_prob="0.985" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70008" g_stop="70696" g_length="689"/>
          <reference_exon_boundary r_type="cDNA" r_start="856" r_stop="1544" r_length="689" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0223O22.1" gen_strand="+" ref_id="SGN-U318054" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>1544</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0223O22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U318054" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68991" e_stop="69845"/>
          <exon e_start="70008" e_stop="70696"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTAATTTTATATATAAGAAAATAACAGCAATGATTGTACCGGCCGGAAAAATGGAAGTAACTACCGGCGAAACTAACACAATCTATCCATCTAAGCCGCCTTTCACAGAAAACCATGTCCTTCCTCTCTCCCATATTGACACCGATCGGAACCTCAATTTCACTTTCCGATACCTCCGTGTCTACGTCAATGACGACACCACATCAGACCCATATGAAGTTGTCACCTCCTCCCTCTCCGCCGCTCTCGTCCACTACTACCAATTCGCCGGCTCTCTCCGCCGTCGTCCATCGGACAACCGTCTAGAGCTTCACTGTCAAGTGGGGGATGGCGTTCCCGTAATTCCGTCGACGGTGGATTGTACCTTGGCTTCAATGAACTACCTGGATGATCCGGATTATAACTTGGCTGAGAAGCTGGTACCCGACCCGAGAGATGAGGAGGCGTTGACCCGACCCTTGATTTTGCAAGTGAACCGTTTTAAGTGTGGTGGGTGGGTTTTCGGAACGGCGGTTCATCACGCCATGTGTGATGGAATGGGTTCGACGCTGTTTTTTCATGCTATGGCGGAGATTGCTCGTGGGGAGAAGGGGATGAAGATTGAACCGGTGTGGGACCGGTCGAATTTGCTTGGACCGAGGAATCCACCACGAGTTGAATTTCCGGTTCATGAGTTCCTCAGTTTGGATAGGGATTCGTGTCCATACTTGGAATCAGGTAACTCGGCAGTTCGAGAGTGCTTTGAGGTGAAAGATGAGTGGTTGGATAGACTAAAGGGGTTTCTTCATGAGCAATCTGCAGGTTCAAAGTATACAACTTTTGAAGCTTTGGGAGCTTTCATATGGCGAGCAAAGTATGTTCTCTTTTCATTTGTTTTTGTTATAGTTATACTGATAATCGAACTTTACACTCCTCAAGTCAAATGCTTCCTTGATCATTGTCATTTTGACATCATGGAAAGTTTTAGCTTATCTTGGCTATAGATATTTGTTTAATTTAATTTATGAAAGTGCAGGGTAAAGGCTTGTAAAATGTCAGATGATGAGACAGTGAAGTATGCTTATCTAACCAATATCAGAAGAAGAGTGAAGCCACCATTGCCAGCAGGTTACTGGGGCAATGGCTGTGTGCCAATATACGTTCAGCTCCTCGCAAAAGACATCATCAATGAACCTATCTGGAAAGCAGCAGACGCGATAAAGAAGAGCAAGGACATCATCACAGATGAGTATGTTCGTTCGTTCATTGATTTTCAGGAGCTGCATTATGATGAAGGGATCACATCAGGGAATAGAGTGAGTGCATTTACAGATTGGCGGCATGTAGGCCACGAGACGGTTGATTTTGGATGGGGTGGCCCTGTGACTGTCTTTCCTCTGTCTAGACACTTAGTTGGGAGTGTTGAACCTTGCTTTTTCTTGCCTTGTTCTTCTAAAACTCAAGGTAAGAAAGATGGTTTCAAAGTTTTGGTCTGTCTGCAACAAGAAGCCATGCCCGTTTTCATGGAAGAGATGGAAAAGTTGGAGCATGGACTTGCTTGATTGATTTTACTATATATATGTGTGTGTGTTATACTAAACTAATAAAAACAACATTTACAAGTAGAGACCAAATTTGGCATATGTATTACTACATTTTCGACTGCTAAATGTTCTTGTAAGTAAATTACAATGAAGAAATGTAATCCTTTACATAATTTAACTA</genome_strand>
        <mrna_strand>TTTTAATTTTATATACAAGAAAATAACAGCAATTATTGTACCGGCCGGAAAAATGGAAGTAACTACCGGCGAAACTAACACAATCTATCCATCTAAGCCGCCTTTCACAGAAAACCATGTCCTTCCTCTCTCCCATATTGACACCGATCGGAACCTCAATTTCACTTTCCGATACCTCCGTGTCTACGTCAATGACGACACCACATCAGACCCATATGAAGTTGTCACCTCCTCCCTCTCCGCCGCTCTCGTCCACTACTACCAATTCGCCGGCTCTCTCCGCCGTCGTCCATCGGACAACCGTCTAGAGCTTCACTGTCAAGTGGGGGATGGCGTTCCCGTAATTCCGTCGACGGTGGATTGTACCTTGGCTTCAATGAACTACCTGGATGATCCGGATTATAACTTGGCTGAGAAGCTGGTACCCGACCCGAGAGATGAGGAGGCGTTGACCCGACCCTTGATTTTGCAAGTGAACCGTTTTAAGTGTGGTGGGTGGGTTTTCGGAACGGCGGTTCATCACGCCATGTGTGATGGAATGGGTTCGACGCTGTTTTTTCATGCTATGGCGGAGATTGCTCGTGGGGAGAAAGGGATGAAGATTGAACCGGTGTGGGACCGGTCGAATTTGCTTGGACCGAGGAATCCCCCGCGAGTTGAATTTCCGGTTCATGAGTTCCTCAGTTTGGATAGGGATTCGTGTCCATACTTGGAATCAGGTAAATCGGCAGTTCGAGAGTGCTTTGAGGTGAAAGATGAGTGGTTGGATAGACTAAAGGGGTTTCTTCATGAGCACTCTTCAGGTTCAAATTATACAACTTTTGAAGCTTTGGGAGCTTTCATATGGCGAGCAAA..................................................................................................................................................................GGCAAAGGCTTGTAAAATGTCAGATGATGAGACAGTGAAGTATGCTTATCTAACCAATATCAGAAGAAGAGTGAAGCCACCATTGCCAGCTGGTTACTGGGGCAATGGCTGTGTGCCAATATACGTTCAGCTCCTCGCAAAAGACATCATCAATGAACCTATCTGGAAAGCAGCAGACGCGATAAAGAAGAGCAAGGACATCATCACAGATGAGTATGTTCGTTCGTTCATTGATTTTCAGGAGCTGCATTATGTTGAAGGGATCACATCAGGGAATAGAGTGAGTGCATTTACAGATTGGCGGCATGTAGGCCACGAGACGGTTGATTTTGGATGGGGTGGCCCTGTGACTGTCTTTCCTCTGTCTAGACACTTAGTTGGGAGTGTTGAACCTTGCTTTTTCTTGCCTTATTCTTCTGCAATTCAAGGTAAGAAAGATGGTTTCAAAGTTTTGGTCTGTCTGCAACAAGAAGCCATGCCTGTTTTCATGGAAGAGATGGAAAAGTTGGAGCATGGACTTGCTTGATTGATTTTACTATATATATATGTGTGTGTTATATTAAACTAATAAAAACAACATTTACAAGTAGAGACCAAATTTGGCATATGTATTACTACATTTTCGACTGCTAAATGTTCTTTCAAGTAAATTACAATGAAGAAATGTAATCCTTTACAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U330002" ref_strand="+" ref_description="SGN-U330002        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: AT2G23450.2 | Symbol: None | protein kinase family protein, contains protein kinase domain, Pfam:PF00069 | chr2:9995834-9998739 REVERSE | Aliases: None (evalue: 1e-113, score=406) genbank/nr: gi|42741727|gb|AAS45124.1| WAK-like kinase [Lycopersicon esculentum] (evalue: 1e-114, score=415)">
      <seq>tgcttcgctaatggttagtgtaggcctaatatgctgctttattcgacgaagattgaatttccaaaacagaagaagaagaagccgcgagttatgtgagactacagggatcagcatccccgtttatcagtacaaagaaatggaaaaagcaactgatttcttctctgagaaacggagactaggaaatggcgcgtatggaacagtttattctggaaaacttcaaactgacaattgggtagctatcaaaagaattagacacagagatactgatagcattgaacaattcatcaatgaaatcaagctcctttcctctgtcaatcatccaaacctcgttcgtctcttaggctgctcaatcgaaaatggtgaacagatacttgtttatgaatacatgcctaatgggactttgtcacaacatatacaaagagaaaaagggaacgggcttccatggcctgttcgtcttacaattggagcagaaactgcacaagctatagcttatttgcataatgcaatgcatcctccaatatatcacagagatgttaagtcaagtaatatactcttggattacaattacaagtcaaaagtagcagattttggactgtcaagactcggtttggttgaatcgtctcacatttctactgcaccacaaggaactccgggatatctagatcctcagtatcatcagaactttcagttgtctgataagagcgatgtttatagttttggtgttgttcttgctgagatcataacaggactaaaagcagtagactttgctcgtcctcaagacgaaataaacttggctgcacttgctattgatagaataggaaagggaaacttagatgaaatcatcgatccatttatcgagctacatatggatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0223O22.1" temp_strand="-" temp_description="C04HBa0223O22.1  CU459025.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0223O22 sequenced_by:sanger upload_account_name:uk">
        <position start="72227" stop="70755"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71927" g_stop="71055" g_length="873"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="873" r_length="873" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0223O22.1" gen_strand="-" ref_id="SGN-U330002" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>873</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0223O22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U330002" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71927" e_stop="71055"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTTCGTTAATGGTTAGTGTAGGCCTAATATGCTGCTTTATTCGACGAAGATTGAATTTCCAAAACAGAACAAGAAGAAGCCGCGAGTTATGTGAGACTACAGGGATCAGCATCCCCGTTTATCAGTACAAAGAAATGGAAAAAGCAACTGATTTCTTCTCTGAGAAACGGAGACTAGGAAATGGCGCGTATGGAACAGTTTATTCTGGAAAACTTCAAACTGACAATTGGGTAGCTATCAAAAGAATTAGACACAGAGATACTGATAGCATTGAACAATTCATCAATGAAATCAAGCTCCTTTCCTCTGTCAATCATCCAAACCTCGTTCGTCTCTTAGGCTGCTCAATCGAAAATGGTGAACAGATACTTGTTTATGAATACATGCCTAATGGGACTTTGTCACAACATATACAAAGAGAAAAAGGGAACGGGCTTCCATGGCCTGTTCGTCTTACAATTGGTGCAGAAACTGCACAAGCTATAGCTTATTTGCATAATGCAATGCATCCTCCTATATATCACAGAGATGTTAAGTCAAGTAATATACTCTTGGATTACAATTACAAGTCAAAAGTAGCAGATTTTGGACTGTCAAGACTCGGTTTGGTTGAATCGTCTCACATTTCTACTGCACCACAAGGAACTCCGGGATATCTAGATCCTCAGTATCATCAGAACTTTCAGTTGTCTGATAAGAGCGATGTTTATAGTTTTGGTGTTGTTCTTGCTGAGATCATAACAGGACTAAAAGCAGTAGACTTTGCTCGTCCTCAAGACGAAATAAACTTGGCTGCACTTGCTATTGACAGAATAGGAAAGGGAAACTTAGATGAAATTATCGATCCATTTATCGAGTTACATATGGATGC</genome_strand>
        <mrna_strand>TGCTTCGCTAATGGTTAGTGTAGGCCTAATATGCTGCTTTATTCGACGAAGATTGAATTTCCAAAACAGAAGAAGAAGAAGCCGCGAGTTATGTGAGACTACAGGGATCAGCATCCCCGTTTATCAGTACAAAGAAATGGAAAAAGCAACTGATTTCTTCTCTGAGAAACGGAGACTAGGAAATGGCGCGTATGGAACAGTTTATTCTGGAAAACTTCAAACTGACAATTGGGTAGCTATCAAAAGAATTAGACACAGAGATACTGATAGCATTGAACAATTCATCAATGAAATCAAGCTCCTTTCCTCTGTCAATCATCCAAACCTCGTTCGTCTCTTAGGCTGCTCAATCGAAAATGGTGAACAGATACTTGTTTATGAATACATGCCTAATGGGACTTTGTCACAACATATACAAAGAGAAAAAGGGAACGGGCTTCCATGGCCTGTTCGTCTTACAATTGGAGCAGAAACTGCACAAGCTATAGCTTATTTGCATAATGCAATGCATCCTCCAATATATCACAGAGATGTTAAGTCAAGTAATATACTCTTGGATTACAATTACAAGTCAAAAGTAGCAGATTTTGGACTGTCAAGACTCGGTTTGGTTGAATCGTCTCACATTTCTACTGCACCACAAGGAACTCCGGGATATCTAGATCCTCAGTATCATCAGAACTTTCAGTTGTCTGATAAGAGCGATGTTTATAGTTTTGGTGTTGTTCTTGCTGAGATCATAACAGGACTAAAAGCAGTAGACTTTGCTCGTCCTCAAGACGAAATAAACTTGGCTGCACTTGCTATTGATAGAATAGGAAAGGGAAACTTAGATGAAATCATCGATCCATTTATCGAGCTACATATGGATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U346151" ref_strand="+" ref_description="SGN-U346151        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT2G23450.2 | Symbol: None | protein kinase family protein, contains protein kinase domain, Pfam:PF00069 | chr2:9995834-9998739 REVERSE | Aliases: None (evalue: 2e-36, score=149) genbank/nr: gi|42741727|gb|AAS45124.1| WAK-like kinase [Lycopersicon esculentum] (evalue: 9e-41, score=170)">
      <seq>ttcacatgtcctcaaaaacatgaattttcctctccattttacaacaattctctgtttgtttattctcaagttttcatcaaacacagttcttggatcaaactgtacccattcatgtggaaacagattccttccatttccttttggtttctcccatggctgcccaattcagcttaactgtacctcaaatgaagaaattttcatgaaagatttcccagttcaatcagtaacttcagataccattttaatcaatcttttagcaaaatgcagccgaccattttcagcaattcacaatctttttagcccaaattacgcacccacttcaaaaaacggtatacttttccagaattgcagttcttcacagtctagctgtttgattccatctacgatgatacaaacccattttgacattcttgattgtggtaaagaaaacatgagctgttattctgagccgaatagtgagaacaatttcatcaatttgaagaatttgtcgaaaacagggtgtggctctctgttttctgcaatttctgtggagtcgacggtgaatagctcggctgtttcgttggatgttcagatggttcaattggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0223O22.1" temp_strand="-" temp_description="C04HBa0223O22.1  CU459025.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0223O22 sequenced_by:sanger upload_account_name:uk">
        <position start="74930" stop="73746"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74630" g_stop="74046" g_length="585"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="585" r_length="585" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0223O22.1" gen_strand="-" ref_id="SGN-U346151" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>585</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0223O22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U346151" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74630" e_stop="74046"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCACATGTCCTCAAAAACATGAATTTTCCTCTCCATTTTACAACAATTCTCTGTTTGTTTATTCTCAAGTTTTCATCAAACACAGTTCTTGGATCAAACTGTACCCATTCATGTGGAAACAGATTCCTTCCATTTCCTTTTGGTTTCTCCCATGGCTGCCCAATTCAGCTTAACTGTACCTCAAATGAAGAAATTTTCATGAAAGATTTCCCAGTTCAATCAGTAACTTCAGATACCATTTTAATCAATCTTTTAGCAAAATGCAGCCGACCATTTTCAGCAATTCACAATCTTTTTAGCCCAAATTACGCACCCACTTCAAAAAACGGTATACTTTTCCAGAATTGCAGTTCTTCACAGTCTAGCTGTTTGATTCCATCTACGATGATACAAACCCATTTTGACATTCTTGATTGTGGTAAAGAAAACATGAGCTGTTATTCTGAGCCGAATAGTGAGAACAATTTCATCAATTTGAAGAATTTGTCGAAAACAGGGTGTGGCTCTCTGTTTTCTGCAATTTCTGTGGAGTCGACGGTGAATAGCTCGGCTGTTTCGTTGGATGTTCAGATGGTTCAATTGGG</genome_strand>
        <mrna_strand>TTCACATGTCCTCAAAAACATGAATTTTCCTCTCCATTTTACAACAATTCTCTGTTTGTTTATTCTCAAGTTTTCATCAAACACAGTTCTTGGATCAAACTGTACCCATTCATGTGGAAACAGATTCCTTCCATTTCCTTTTGGTTTCTCCCATGGCTGCCCAATTCAGCTTAACTGTACCTCAAATGAAGAAATTTTCATGAAAGATTTCCCAGTTCAATCAGTAACTTCAGATACCATTTTAATCAATCTTTTAGCAAAATGCAGCCGACCATTTTCAGCAATTCACAATCTTTTTAGCCCAAATTACGCACCCACTTCAAAAAACGGTATACTTTTCCAGAATTGCAGTTCTTCACAGTCTAGCTGTTTGATTCCATCTACGATGATACAAACCCATTTTGACATTCTTGATTGTGGTAAAGAAAACATGAGCTGTTATTCTGAGCCGAATAGTGAGAACAATTTCATCAATTTGAAGAATTTGTCGAAAACAGGGTGTGGCTCTCTGTTTTCTGCAATTTCTGTGGAGTCGACGGTGAATAGCTCGGCTGTTTCGTTGGATGTTCAGATGGTTCAATTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U326252" ref_strand="+" ref_description="SGN-U326252        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: | Symbol: None | transducin family protein / WD-40 repeat family protein, contains 7 WD-40 repeats (PF00400); related to En/Spm transposon family of maize | chr2:11275020-11276701 FORWARD | Aliases: T9J22.16, T9J22_16(evalue: 3e-85, score=311) genbank/nr: gi|53850519|gb|AAU95436.1| At2g26490 [Arabidopsis thaliana] >gi|50253512|gb|AAT71958.1| At2g26490 [Arabidopsis thaliana] >gi|2739374|gb|AAC14498.1| En/Spm-like transposon protein [Arabidopsis thaliana] >gi|15225317|ref|NP_180217.1| transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (evalue: 2e-83, score=311)">
      <seq>gattcctcctccactccatcaattttctcctcatctccatttttctccctttgccttttctctctcattctccttttgtccaaaaaaattcaaaaatttaaattcataacaaaaaaaggccagtaaaattactagtttaacctcaaatgttagttgaaacttgtccctacagtaacaactaatttaattttgtataccaatacttttctaaacatcatggtacactccatgcccaacatgtcgtcaactgctgtgatggacgacgatgattttgacgtccgtcacagcagtttctcggcttatgacccgaatcgccttagcgaagacgggtcccctcccatgttgtctccatggaaccaaacttgttccccttttactaaatcctcttggcataacttggatgataattttccaaaaaatttgccacaaaatggactcattggttcccttgttcgtgaagaaggacatatttattctttagctgcaaagaatgatattctttatactggatccgatagcaaaaacatacgtgtttggaaagatatgaaggaattttcagcttttaaatcaaatagcggtcttgttaaagctattatcatcgccggagagaagatattcaccggtcatcaagatggaaaagttcgagtttggaaggttcgatccaaaaaccctaacaaccataaacgtgctgggagtttgccaaaactcatggaccttttcaaggcttccattaaacctagcaactacgtagaggtcaaacgtaatcggaccactctttggattaagcattgtgacgcaatttcatgtttaagcatggaccatagtgaaggcctactctactcagcttcatgggatagaacgtttaaagtatggaaagttgataaatccaaatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0223O22.1" temp_strand="+" temp_description="C04HBa0223O22.1  CU459025.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0223O22 sequenced_by:sanger upload_account_name:uk">
        <position start="95275" stop="97011"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95574" g_stop="96321" g_length="748"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="753" r_length="753" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96322" i_stop="96570" i_length="249">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="96571" g_stop="96711" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="754" r_stop="894" r_length="141" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0223O22.1" gen_strand="+" ref_id="SGN-U326252" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>889</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0223O22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U326252" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95574" e_stop="96321"/>
          <exon e_start="96571" e_stop="96711"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTCCTCCTTCACTTCAACAATTTTCTCCTCATCTCCATTTTTCTCCCTTTGCTTTTTCTCTCTCATTCTCCTTTTGTCCAAAAAAATT--TGAATTTATAACCA-AA-AAAAAAAGG-CAATAAAATTACTAGTTTAACCTCAAATGTTAGTTGAAACTTGTCCCTATAGTAACAACTAATTTAATTTTGTATACCAACATTTTTCTAAACATCATGGTACACTCCATGCCCAACATGTCGTCAATTGCTGTGATGGACGACGATGATTTTGACGTCCGTCACAGCAGTTTCTCGGCTTATGACCCGAATCGCCTTAGTGAAGACGGGTCACCTCCCATGTTGTCTCCATGGAACCAAACTTGTTCCCCTTTTACTAAATCCTCTTGGCATAACTTGGATGATAATTTTCCAAAAAATTTGCCACAAAATGGACTCATTGGTTCCCTTGTTCGTGAAGAAGGACATATTTATTCTTTAGCTGCAAAGAATGATATTCTTTATACTGGTTCCGATAGCAAAAACATACGTGTTTGGAAAGATATGAAGGAATTTTCAGCTTTTAAATCAAATAGCGGTCTTGTTAAAGCTATTATCATCGCTGGAGAGAAGATATTCACCGGTCATCAAGATGGAAAAGTTCGAGTTTGGAAGGTTCAATCCAAACACCCTAACAACCATAAACGTGCTGGGAGTTTGCCAAAACTCATGGACCTTTTCAAGGCTTCCATTAAACCTAGCAACTACGTAGAGGTAAATATTTACTTCTTTGACTCTACGTTTCATTTTATACGACACATTTTTTCTAAAATTCTATGTAAGAAATATACTTTTTTTTTCAATGACCTTTCATAACTTATTCATCTGATTCTTTTTTATGGGTCAGTCAAAAAAATGTGTAAGGACATGATTTTTTTCTAGGGTAATGAGATTTGAATCGAAATCTGAGTCTATAATGTTATATTTTACGTGACTAAATATAATTATATTATGTCTAAACAGGTAAAACGTAATCGGACCACTCTTTGGATTAAGCATTGTGACGCAATTTCATGTTTAAGCATGGACCATAGTGAAGGCCTACTCTACTCAGCTTCATGGGATAGAACATTTAAAGTATGGAAAGTTGATAAATCCAAATGT</genome_strand>
        <mrna_strand>GATTCCTCCTCCACTCCATCAATTTTCTCCTCATCTCCATTTTTCTCCCTTTGCCTTTTCTCTCTCATTCTCCTTTTGTCCAAAAAAATTCAAAAATTTAAATTCATAACAAAAAAAGGCCAGTAAAATTACTAGTTTAACCTCAAATGTTAGTTGAAACTTGTCCCTACAGTAACAACTAATTTAATTTTGTATACCAATACTTTTCTAAACATCATGGTACACTCCATGCCCAACATGTCGTCAACTGCTGTGATGGACGACGATGATTTTGACGTCCGTCACAGCAGTTTCTCGGCTTATGACCCGAATCGCCTTAGCGAAGACGGGTCCCCTCCCATGTTGTCTCCATGGAACCAAACTTGTTCCCCTTTTACTAAATCCTCTTGGCATAACTTGGATGATAATTTTCCAAAAAATTTGCCACAAAATGGACTCATTGGTTCCCTTGTTCGTGAAGAAGGACATATTTATTCTTTAGCTGCAAAGAATGATATTCTTTATACTGGATCCGATAGCAAAAACATACGTGTTTGGAAAGATATGAAGGAATTTTCAGCTTTTAAATCAAATAGCGGTCTTGTTAAAGCTATTATCATCGCCGGAGAGAAGATATTCACCGGTCATCAAGATGGAAAAGTTCGAGTTTGGAAGGTTCGATCCAAAAACCCTAACAACCATAAACGTGCTGGGAGTTTGCCAAAACTCATGGACCTTTTCAAGGCTTCCATTAAACCTAGCAACTACGTAGAG.........................................................................................................................................................................................................................................................GTCAAACGTAATCGGACCACTCTTTGGATTAAGCATTGTGACGCAATTTCATGTTTAAGCATGGACCATAGTGAAGGCCTACTCTACTCAGCTTCATGGGATAGAACGTTTAAAGTATGGAAAGTTGATAAATCCAAATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U318035" ref_strand="+" ref_description="SGN-U318035        Tomato 200607 #1 [10 ESTs aligned] arabidopsis/peptide: AT4G31940.1 | Symbol: None | cytochrome P450, putative, cytochrome P450 monooxygenase, Pisum sativum, PATCHX:G894153 | chr4:15451994-15454166 FORWARD | Aliases: F11C18.7 (evalue: 6e-141, score=498) genbank/nr: gi|78100210|gb|ABB20912.1| P450 mono-oxygenase [Stevia rebaudiana] (evalue: 1e-156, score=556)">
      <seq>ctagttcctctgtttttttcttctttcttcgcaaacatgctttctcagcgaaaatacatagtaaaagtaaaagagtacctggagctggcggagcatggcctattatcggtcatcttcaccttttgagtggatccgaaacagagcaattacctcacaaaatcatggggcgcatggcagataagtacgggccaattttcggaatgaagcttggagttcatcaggttgtagttgtgagcgatcccaaattagccaaagaatgtttcacaactaacgatttagccctagcaggtcgccctaaatccatggcttcagagattgtaggctacaaacacgctatgtttgcactttctgcttacggtccttactggagagaaacaaggaagattgccacaattgaacttttctccgctcgacgaatcgagatgctcaaacacatcagagaatttgaggtaaaatcaggtattaaagagatttatagtaattgggggaagaataatttaaatggtgttgtgaagatggagatgaaggaatggattggagatttagttatgaatactatggggaaaatattattcggaaaagggcgaaggagtaatgaggacgaaggaataaataaagctcacaaagcaattcgaagatttttcgaattgttaggagcttttgttgtggctgattttttaccttatttaagatggctggacattggaggccatgagaaagcgatgaaggagatttctgaagaaatggactctgttgttgaagaatggttaacagagcacaaaacaaagagaggaattattaaatctggtgaagaagaagatttcatggatgtaatgctttccaaatgtgaagacagagatctgcctggatttgatgccgatactgctataaaagctaattgcatgggtctactatcggcaggtacagacaccaccatcgtaactttaacatgggctttatgtttactcttgaacaactacgaagcactaaaaaaggctcaagatgagctagacgctcatgttggcaagaatagatgggtccaagaatcggatatcaagaacttggtttatcttcaagctgttgtcaaagaagtattacgtttatatccagctgggccgctctctgtaccacacgagtcaagggaggattgtgttattgggggatacgatataccaaaagggactcgcttattagtgaacttatggaagattcagcacgatcctaatatatggccaaatcctcacgagtttaagccagagaggttcttgtcgacccacaaggatgtggatgtaaagggaaatcactttgagttaatgccatttggtagtggaagaagaatgtgccctggaatatctttggcccttcaagtggtgccctttgtaatagcagtgttgctgcaggggtttgacatgaagaggccttcagatgaagcaattgatatgagtgagagctttggattgacagtgctcaaagcttctccactccaagttctccttgctccgcgcttggctcccgatctttatgaatgaaatgatagacaaaatttgtgcctcatgccactgttgtttactacaagtttgtaatattgtaatgcagataataacagaacttcaaaattcttcatttgaaatgtgattgtaaaagtatttctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0223O22.1" temp_strand="-" temp_description="C04HBa0223O22.1  CU459025.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0223O22 sequenced_by:sanger upload_account_name:uk">
        <position start="109459" stop="107192"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="109152" g_stop="108304" g_length="849"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="905" r_length="848" r_score="0.932"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108303" i_stop="108225" i_length="79">
            <donor d_prob="1.000" d_score="0.86"/>
            <acceptor a_prob="0.999" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108224" g_stop="107495" g_length="730"/>
          <reference_exon_boundary r_type="cDNA" r_start="906" r_stop="1634" r_length="729" r_score="0.916"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0223O22.1" gen_strand="-" ref_id="SGN-U318035" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>1579</cumulative_length_of_scored_exons>
        <coverage percentage="0.956" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0223O22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U318035" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="109152" e_stop="108304"/>
          <exon e_start="108224" e_stop="107495"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTAGTAGTAGTAGAAAGGTACCTGAAGCTGGCGGAGCATGGCCTATTATCGGCCATCTCCACCTTCTCGGTGGATCTGAATCTGATCACTTGCCTCACAAAATGTTGGGCCGCTTGGCAGATAAGTACGGGCCTATTTTCGGAATGAAGCTTGGAGTTCATCAGGTTGTAGTTGTGAGTGATCACAAATTAGCAAAGGAGTGCTTCACAACTAACGATTTAGCCCTAGCAGGTCGGCCTAAATCAATGGCTTCAGAGATTATAGGCTACAAACATGCTATGTTTGGACTTTGTTCTTACGGTCCGTACTGGAGAGAAACAAGGAAAATTGCCACAATTGAACTTTTCTCCGCTCGACGAATCGAGATGCTCAAACACATCAGAGAATTTGAGGTAAAATCAGGTATTAAAGAGATTTATAATAATTGGGAGAAGAATAATTTAAATGGTGTTGTGAAGATGGAGATGAAGGAATGGATTGGGGATTTATTTATGAACACTATGGGGAAAATATTATTCGGAAAAGGGCGAAGGAGTAACGAGGACGAAGGAATAAATAAAGCTCACAAAGCAATTCGAAGATTTTTCGAATTGTTAGGAGTTTTTGTTGTGGCTGATTTTTTACCTTATTTAAGATGGCTGGACATTGGAGGCCATGAGAAAGCGATGAAGGAGGTTTCTAAAGAAATGGACTCTGTTGTTGAAGAATGGTTAACAGAGCACAAAACGAAGAGAGGAATTATTAAATCTGGTGAAGAAGAAGATTTCATGGATGTAATGCTTTCCGTTTGTGAAGACAGAGATCTACCTGGAGTTGATGCCGATACCGCTATCAAAGCTACATGTATGGTACGTTACTTCTGATCAAATTACTCTAAAATTGTATGATCACGTATATGGTTCCGATTGTTGAATTTGTCTTGTTTAGGCTCTGCTATCGGCAGGCACAGACACAACGATGGTAACTCTAACATGGATTTTATCTCTACTACTCAACAACTATCAATCACTTCAAAAGGCTCAAGATGAGCTAGACGCTCATGTTGGCAAGAATAGATGGGTCCAAGAATCCGATATAAAAAACTTAGTTTATTTTCAAGCTATTGTTAAAGAAGCATTACGTTTATATCCAGCTGGACCGCTCTCTTTACCACACGAGTCGATGGAGGATTGTACTATCAGTGGGTATGATATACCAAAAGGCACTCGCTTATTAGTGAACATATGGAAGATTCAGCGCGATCCTAATATATGGCCAAATCCTCACGAGTTTAAGCCAGAGAGGTTCTTGTCGACCCACAAGGATGTCGATGTAAAGGGCAATCACTTTGAGTTAATGCCATTTGGTAGTGGAAGAAGAATGTGCCCTGGAATTTCGTTGGCCCTTCAAGTTTTGCCCTTTGTAATAGCAATGTTGCTGCAGGGGTTTGACATGAAGAGGCTTTTGGATGAACCGATTGATATGAGTGAGAGCTTTGGATTGACCGTACTCAAAGCTTCTCCACTCGAAGTTCTCCTTGCTCCGCGCTTGGCTCCCGATCTTTATGAATGAAATGATAGACAAAATTTGTGCCTCATGCCACTGTTGTTTACTACTAGTTTGTAATATTGTAATGCAAATAATAACAAAACTTCAAAATTCCTACATTTGAAATGTG</genome_strand>
        <mrna_strand>A-TAGTAAAAGTAAAAGAGTACCTGGAGCTGGCGGAGCATGGCCTATTATCGGTCATCTTCACCTTTTGAGTGGATCCGAAACAGAGCAATTACCTCACAAAATCATGGGGCGCATGGCAGATAAGTACGGGCCAATTTTCGGAATGAAGCTTGGAGTTCATCAGGTTGTAGTTGTGAGCGATCCCAAATTAGCCAAAGAATGTTTCACAACTAACGATTTAGCCCTAGCAGGTCGCCCTAAATCCATGGCTTCAGAGATTGTAGGCTACAAACACGCTATGTTTGCACTTTCTGCTTACGGTCCTTACTGGAGAGAAACAAGGAAGATTGCCACAATTGAACTTTTCTCCGCTCGACGAATCGAGATGCTCAAACACATCAGAGAATTTGAGGTAAAATCAGGTATTAAAGAGATTTATAGTAATTGGGGGAAGAATAATTTAAATGGTGTTGTGAAGATGGAGATGAAGGAATGGATTGGAGATTTAGTTATGAATACTATGGGGAAAATATTATTCGGAAAAGGGCGAAGGAGTAATGAGGACGAAGGAATAAATAAAGCTCACAAAGCAATTCGAAGATTTTTCGAATTGTTAGGAGCTTTTGTTGTGGCTGATTTTTTACCTTATTTAAGATGGCTGGACATTGGAGGCCATGAGAAAGCGATGAAGGAGATTTCTGAAGAAATGGACTCTGTTGTTGAAGAATGGTTAACAGAGCACAAAACAAAGAGAGGAATTATTAAATCTGGTGAAGAAGAAGATTTCATGGATGTAATGCTTTCCAAATGTGAAGACAGAGATCTGCCTGGATTTGATGCCGATACTGCTATAAAAGCTAATTGCATG...............................................................................GGTCTACTATCGGCAGGTACAGACACCACCATCGTAACTTTAACATGGGCTTTATGTTTACTCTTGAACAACTACGAAGCACTAAAAAAGGCTCAAGATGAGCTAGACGCTCATGTTGGCAAGAATAGATGGGTCCAAGAATCGGATATCAAGAACTTGGTTTATCTTCAAGCTGTTGTCAAAGAAGTATTACGTTTATATCCAGCTGGGCCGCTCTCTGTACCACACGAGTCAAGGGAGGATTGTGTTATTGGGGGATACGATATACCAAAAGGGACTCGCTTATTAGTGAACTTATGGAAGATTCAGCACGATCCTAATATATGGCCAAATCCTCACGAGTTTAAGCCAGAGAGGTTCTTGTCGACCCACAAGGATGTGGATGTAAAGGGAAATCACTTTGAGTTAATGCCATTTGGTAGTGGAAGAAGAATGTGCCCTGGAATATCTTTGGCCCTTCAAGTGGTGCCCTTTGTAATAGCAGTGTTGCTGCAGGGGTTTGACATGAAGAGGCCTTCAGATGAAGCAATTGATATGAGTGAGAGCTTTGGATTGACAGTGCTCAAAGCTTCTCCACTCCAAGTTCTCCTTGCTCCGCGCTTGGCTCCCGATCTTTATGAATGAAATGATAGACAAAATTTGTGCCTCATGCCACTGTTGTTTACTACAAGTTTGTAATATTGTAATGCAGATAATAACAGAACTTCAAAATT-CTTCATTTGAAATGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U318036" ref_strand="+" ref_description="SGN-U318036        Tomato 200607 #1 [7 ESTs aligned] arabidopsis/peptide: AT4G31940.1 | Symbol: None | cytochrome P450, putative, cytochrome P450 monooxygenase, Pisum sativum, PATCHX:G894153 | chr4:15451994-15454166 FORWARD | Aliases: F11C18.7 (evalue: 2e-118, score=254) genbank/nr: gi|2739004|gb|AAB94590.1| CYP82C1p [Glycine max] (evalue: 4e-120, score=267)">
      <seq>tctcccaaaaataggagaggatccacagtaactgtcttttccacaccaaaaagttatgtcaacgctttcgtatacaaattcatatttacgattcatgcgtctaagttttcataaaaataaacaaggtaagagtgttatcacttaccccaatctctctacataaatttcaagtgtctcacatcgaagaagacgactgataaattttattagcaatggatccctttctaattgctgttacattagctacctccttttttctaattttctttcttcagaaacaattttactcagttaaaaagcagagtagtagtagtagaaaggtacctgaagctggcggagcatggcctattatcggccatctccaccttctcggtggatctgaatctgatcacttgcctcacaaaacgttgggccgcttggcagataagtacgggcctatattcggaatgaagcttggagttcatcaggttgtagttgtgagtgatcacaaattagcaaaagaatgcttcacaactaacgatttagccctagcaggtcggcctaaatcaatggcttcagagattataggctacaaacatgctatgtttggactttgttcttacggtccgtactggagagaaacaaggaaaattgccacaattgaacttttctccgctcgacgaatcgagatgctcaaacacatcagagaatttgaggtaaaatcaggtattaaagagatttataataattgggggaagaataatgtaaatggttttgtaaagatggagatgaaggaatggattggggatttatttatgaacactatggggaaaatattattcggaaaagggcgaaggagtaacgaggacgaaggaataaataaagctcacaaagcaattagaagatttttcgaattgttaggagtttttgttgtggctgattttttaccttatttaagatggctggacattggaggccatgagaaagcgatgaaggaggtttctaaagaaatggactctgttgttgaagaatggttaacagagcacaaaacgaagagaggaattattaaatctggtgaagaagaagatttcatggatctaatgctttccgtttgtgaagacagagatctacctggagttgatgccgataccgctatcaaagctacatgctctgctatcggcaggcacagacacaacgatggtaactctaacatggattttatctctactactcaacaactatcaatcacttcaaaaggctcaagatgagctagacgctcatgttggcaagaatagatgggtccaagaatccgatataaaaaacttagtttatcttcaagctattgttaaagaagcattacgtttatatccagctggaccactctctttaccacacgagtcgatggaggattgtactatcagtgggtatgatataccaaaaggcactcgcttactagtgaacttatggaagattcagcacgatcctaatatatggccaaatcctcacgagtttaagccagagaggttcttgtcgacccataaggatgtggatgtaaagggcaatcactttgagttaatgccatttggtagtggaagaagaatgtgccctgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0223O22.1" temp_strand="-" temp_description="C04HBa0223O22.1  CU459025.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0223O22 sequenced_by:sanger upload_account_name:uk">
        <position start="123627" stop="107481"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="123327" g_stop="123037" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="291" r_length="291" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="123036" i_stop="109164" i_length="13873">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="109163" g_stop="108309" g_length="855"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="1146" r_length="855" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108308" i_stop="108225" i_length="84">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108224" g_stop="107781" g_length="444"/>
          <reference_exon_boundary r_type="cDNA" r_start="1147" r_stop="1590" r_length="444" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0223O22.1" gen_strand="-" ref_id="SGN-U318036" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>1590</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0223O22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U318036" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="123327" e_stop="123037"/>
          <exon e_start="109163" e_stop="108309"/>
          <exon e_start="108224" e_stop="107781"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCCCAAAAATAGGAGAGGATCCACAGTAACTGTCTTTTCCACACCAAAAAGTTATGTCAACGCTTTCGTATACAAATTCATATTTACGATTCATGCGTCTAAGTTTTCATAAAAATAAACAAGGTAAGAGTGTTATCACTTACCCCAATCTCTCTACATAAATTTCAAGTGTCTCACATCGAAGAGGACGACTGATAAATTTTATTAGCAATGGATCCCTTTCTAATTGCTGTTACATTAGCTACCTCCTTTTTTCTAATTTTCTTTCTTCAGAAACAATTTTACTCAGTTAAAAAGCAGAGTAGTAGTAGAAAGGTACCTGGAGCTGGCGGAGCATGGCCTATTATCGGCCATCTCCACCTTCTCGCTGGATCTGAATCTGATCACTTGCCTCACAAAACGTTGAGCCGCATGGCAGATAAGTACGGGCCGATATTCGGAATGAAGCTTGGAGTTCATCAGGTTGTAGTTGTGAGCGATCCCAAATTAGTCAAAGAATGCTTCACAACTAACGATTTAGCCCTAGCCAACCGGCCTAAATCCATGGTTTCAGAGATTATAGGCTACAAAGACGCTATGTTTGGACTTTGTTCTTACGGTCCTTACTGGAGAGAAACAAGGAAAATTGCCACAATTGAACTTTTCTCAGCTCGGCGAATCGAGATGCTCAAACACATCAGAGAATTTGAGGTAAAATCATCTGTTAAAGAGATTTATAATAATTGGGGGAAGAATAATTTAAATGGTTTTGTGAAGATGGAGATGAAGGAATGGATTGGAGATTTAGTTATGAACACTATGGGGAAAATATTATTCGGAAAAGGGCGAAGGAGTAATGAGGACGAAGGAATAAATAAGGCTCACAAAGCAATTCGAAGATTTTTCGAATTGTTAGGAGCTTTTGTTGTGGCTGATTTTTTACCTTACTTAAGATGGCTGGACATTGGAGGCCATGAGAAAGCGATGAAGGAGGTTTCTAAAGAATTGGACTCTGTTGTTGCAGAATGGTTAACAGAGCACAAAACAAAGAGAGGAATTATTAAATCTGGTGAAGAAGAAGATTTCATGGATGTCATGCTTTCCATTTGTGAAGACAGAGATCTGCTTGGATTCGATGCCGATACCGCTATCAAAGCTACATGTATGGTACGTTAATTATTCCAAAATTGTTTCTATCTTGATCTCGTATATGAATTTGATTGCTGAATTTGTCTTGTTTAGGCTCTGCTATCGGCAGGTACAGACACGACGATTGTAACTCTAACGTGGACTTTATCTCTACTACTCAATAACTATCAATCACTTCAAAAGGCTCAAGATGAGCTAGACGCTCATGTTGGCAAGAACAGATGGGTCCAAGAATCGGATATAAAAAGCTTAGTTTATCTTCAAGCTATTGTTAAAGAAGCATTACGTTTATATCCAGCTGCACCACTCTCAGTACCACACGAGTCGATGGAGGATTGTACTATCAGTGGGTATGATATACCAAAAGGCACTCGCTTACTAGTGAACTTATGGAAGATTCAGCACGATCCTAATATATGGCCAAATCCTCTCGAGTTTAAGCCAGAGAGGTTCTTGTCGACCCATAAGGATGTGGATGTAAAGGGCAATCACTTTGAGTTAATGCCATTTGGTAGTGGAAGAAGAATGTGCCCTGGAATTTCGTTAGCCCTTCAAGTTTTGCCCTTTGTAATTGCAAAATTGCTGCAGGGTTTTAACATGAAGAGGCCTTCAGATGAACCAATTGATATGAGTGAGAGCTTTGGATTGACCGTACTCAAAGCTTCTCCACTCGAAGTTCTCCTTGCTCCGCGCTTGGCTCCCGATCTTTATGAATGAAATGATAGACAAAACTTGTGCCTCATGCCACTGTTGTTTACTACAAGTTTGTAATATTGTAATGCAGATAATAACAGAACTTAAAAATTCCTTCATTTGAAATGCGATTGTAAAAGTATTTTACAAGTCCATCAAGTTTTGGTGGTGAATAATAATAAGATTGCTCAACTGCCACAGGCCTTGGCATTAGAACTCTTGTGCTACAACTACTCCCTTTTGTGCTTGGGCAATTATTGGCAAGATATCAAAAAGAGAGTCGTAGTTGATTTACTCGATATCAAATGTTGCTCAAAATATAAATGAGAAATTAGTTCGAGAACTTGATCATAAACTTTAGTGTACATAGTAATTTGAATCTACAATTTTATGTTAAAATATATGATCAACGCATTTAATAATTTAACATACTATTAAAGAGATTGAACATGTTTTTATTTTTTTTAGTTACGTCTAACCTAGTGAGCAAAATATTATGTACCTAGTTGTTGAGGCCACAGTATTCAACTCTCGTACATACATGTTAGGCATGTGTATGTATATATTCACTTAAAATTTGTCTTCATTATAATGATTTCTTAATTTGTACCTTGTGAGAATCTTTTAGGGTTGGTAGTGATGATACCACATGGGCAAAAATTCATCGTACCTCTCAAAAAGGCCAGGTTGTACTAGTGAGTTGGACAACATGTGATATCTAACGAGGAAATCATGAATATGATTTTCCACTACTACTATATTTTTCCAATAGAGTTTAACGCACTTAACGTATTCACGTGAATTTATGCTCCTCTTTTAAATTATATATAACAGTGTTATATTTTTTAAAAAGTATTTAAGCATAGATGTGTGAACTCACACTTGAAGTATCAAATAACGTCGTGTTATAATGATTGGATGCACTTCTCTAATCAAAGTTAAAAAAATTTGAATCTTTTATTTGACAAAATAAAGTTAAACTGGATGAATTTATATCTTAAATTTTCTTTTTCGTAGTACACCTATCATCTCAAAATTCTGAATATGCCTCTGCTAGTATAATTTCAAAAATTATTGCATATAAGTGAATCTACTAGATGCGTACTCAAAGTATAGCAATCGAGTTTTCCATTGGTTAAACACAAGAAGAAGAAAAAAGGAAGAAGCCAAGTTGTTTCATGGAACATACTTCGCGAATTATCAACTTTCCATAGTATAAAATAGTATTAAACATAGTAATATTTCTATTAGTTCTTTTTTTTATTTAATATTTCTACTAGTTACATTAGCACCGATTATAAATAATTATTGTAAATCACACTAGATACACACTATATATATATATGGTGTGATTTGAACGAATTTGGGAAATCAGACGATACACAAGCGAAATATTAAAGTGAAGAGGGATATGAGAGAGAGGCGAAAGAGATATGCGCATGGTGAGCAAGATAAGAGGAAGACAGACTAGATTTATCTATTATACTAAATACACGTGATTCACACTAATATGTCTAAACATTTGTACACAATGATTAGAGAGTAATTCGAGTACAACTATTTTCTCCATTTCTCTCCAATATGGGCCTTTCCCAAAACGGCTATGTTATATGCCTAGAGCTCTATTGCCAACGACTTAAGCCGGCTTGCCAAGTCCTTAATGTTGGTTAGTAAACCAATCTTGGGCTACCTTCGTATCGTTCAACAAAATTTGATGGGCTCCAAATTTTACTGTGAAAATTGGCGCATATTTGTCTGCCATGAGCCCAAGTGTTTTGTGAGGCAGATTAGATCCAGTGAAAAGATGAAGATGGCCGATAACAAGGAAAAACTACTTAACTACACATAAATTACTATCATATATACAATTTTATCTCTAGTTTCAAACAATTACTTATGTTATTACTTTTTATATTTTATATCATATATTTTAAAAGATACAATCAGATAAACAATTTTTTTTTAAAAAATGAATTGATTAATTATCTTTGTATTTAAACACCTAAATAATGGTGAATTGACATAGAAAAATTCTCTCTCATCAATCATATCTCTCTTCCAAATAAAATTCTTATTATTCATCCGTATTGCATCTGTCATCCCACCCTCATATACATCCGCCAATATTTTTTCTTTCTCTGAAATTACATTTAAATAGCAAATCAAAATTGTTGAATGCCTTGAATTGGGCCCTTAATTTTCTATTGATTCTGTATGTTGGGCCCAAGCCTGTTAGGGCGTAGCTTAGCACTATATATAGACGCTATGGGAAACCCTATTCTGTAATTCTGTTCTTGCCTCTCCATAATAAAACTGTCCCCCTCTTTCCGTGGACGTAGCCAATTTATTGGTGAACCACGTAAACTGTTGTCTTGTTTTTCGCGTTTATATTTTCTCGTATTATCTCAAATTCCGCACAACAAATTGGTATAAGAGCCTCTCGGTTAATCGGTGTTCTTGGAGAATTCGAGATGTCTGCTTTGAACGTGAAAATCGACAAATTCACAGGGAGGAACAGTTTCAGTTTATGGCAGATCAAGATGCGGGCTTTGTTGAAACAGCAAGGCTTCTGGGCGCCGTTGTCGAAAGACAAGAACGCCGTCGTTACTCCTGAGATGGCGATTCTGGAGGAAAAGGCGCACTCGACGATCATGCTGTGTCTCGCGGATGACGTCATCACGGAGGTCTCGGATGAAGAGACTGCTGCTGGTCTGTGGTTGAAGCTGGAGAGTTTGTACATGACAAAATCTCTAACCAACAAGCTGCTTCTGAAACAACGTCTATTCGATTTACGAATGGCTGAAGGTACACAACTCAGGGAACACTTAGAGCAATTGAATACTTTGTTATTAGAATTGCGTAATATCGATGTGAAGATCGAGGATGAAGATGCTGCCCTGATTCTGTTAGTATCTCTCCCAATGTCGTTTGAGAATTTTATTCAATCGTTCATTGTTGGGAAAGATACTGTGTCACTGGAAGAAGTCAGATCGGCCCTTCATAGCAGGGAATTACGGCATAAGGCTAACGGCACAAGTACGGACATACAGCCTTCCGGTCTGTTCACCAGTAGCGGAAAGGGAAGGAAAAACGGCGGAAAGAAAAATAAGCCGATGTCGAAGGGTGCAAAGCCGGATGATGTTTGTAATTACTGCAAGGAGAAGGGACATTGGAAATTTGATTGTCCGAAGAAGAAGAAGCAATCGGAAAAACAATCAGTGTCTGCTGCTGTTGCTGAAGAAGACACCAATTCTGAAGAAGATATTGCCCTAGTTGCGGATGAGCACACTCATCATTCAGATGTGTGGGTTCTCGATTCTGGGGCATCCTATCACATCTGTCCTAGGAGAGAGTGGTTCACGACTTATGAGCAGGTAGACGGAGGCAGCATCTCGATGGCCAACAGTTCTGTCTGCAAGGTGGTTGGGACAGGCTCGATCAAGATAAGGACACATGACGGTAGCTTCTGCACATTGAACGAGGTCAGGCACGTTCCATTGATGATGAAAAATCTGATATCTCTCAGTCTTTTGGACAGCAAGGGATTCAGCTGGTCGGGAAAAGATGGAGTCTTGCGGGTCTGGAAGGGTTCAAATTTGATTCTGAAAGGTGTCATGCGTGGTACTTTGTATTTTCTACAAGGTTCCACGGTTACAGGTTCAGCCCATGTTGCATCGTCAGAATTTCACCAGAAGGATATGACTAAGTTATGGCACATGAGACTTGGTCATATGGGTGAAAGAGGGATGCAAATTCTGTCAAAGGAGGATTTACTTGCTGGTCATAAGGTTAAGAGCCTAGAGTTTTGTGAACATTGTGTTTTTGGAAAACTACATCGCAACAAGTTTCCAAAGGCCATTTATAGAACAAAAGGCACACTTGATTATATTCATTCTGATTGCTGGGGTCCATGCCGTGTTGAGTCTTTGGGAGGTTGCAGATTTTTTGTGTCCATTATTGATGACTACTCAAGGATGACTTGGGTGTACATGATGAAGCATAAAAGTCAAGCCTTCCAGAAGTTCAAGGAGTGGAAAATTTTGATGGAAAATCAAACAGGGAAGAAGATCAAGAGGTTGCGAACTGATAATGGGCTGGAATTCTGTTGGTCTGAATTTGATCAATTCTGTAAGGATGAAGGGATTGCTCGACATCGTACAGTCAGAAATACACCACAGCAGAACGGTGTAGCTGAGCGGATGAATCAAACACTTCTGGAGAGAGCAAGGTGCATGTTCTCTAATGCTGGGCTAGATAGAAGATTCTGGGCAGAAGCGGTTAGTACAGCTTGCTACTTGATTAACCGCGGACCACATACAGGCATACAGTGCAAGACACCTATGGAGATGTGGTCAGGAAAAGCTGCTGATTATTCAAATCTGAAAGCTTTTGGTTGTACGGCTTACTATCACGTCAGTGAAGGTAAGTTAGAACCAAGAGCTAAAAAGGGAGTATTTGTGGGCTACGGAGATGGAGTGAAAGGTTTCAGAATCTGGTCTCCAGCAGAAAAGAGGGTTATTATGAGCAGGAACGTTGTCTTTGATGAAAGTTCTCTGCTTAGAACCATTGTGAAGCCTACAACTACGTCAGAAACTGGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGAGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACAAAAACTGATATTCCAGAATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGCCAAGGAGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGTTGCTGAAGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTTCTGATTCTGAAAAATGGTTTGCCGCTATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGATCTGGTCATACAGCCTTTGGGGAGAAAGATTATTACTTGCAAATGGGTTTTCAAGAAGAAGGAAGGGATATCACCAGCAGAAGGAGTCAAGTATAAAGCCAGGGTTGTTGCCAGAGGTTTCAACCAAAGAGAGGGAGTGGACTACAATGAGATCTTCTCACCAGTGGTCAGACATACTTCCATCCGAGTGTTACTAGCGATAGTTGCACATCAGAATCTGGAGCTTGAACAACTTGATGTGAAGACAGCGTTTCTACATGGAGAGTTGGAGGAAGAGATATACATGACTCAGCCGGATGGTTTCCAAGTTCCAGGGAAGGAAAATCACGTCTGCAAGTTGAAGAAGTCCTTATATGGACTTAAGCAGTCTCCAAGGCAGTGGTATAAAAGGTTTGACAGCTATATGGTGAAGTTGGGCTATACTCGGAGCTCATATGATTGTTGTGTCTACTACAATAGGCTCAATGATGATTCATTCATCTATCTGGTGCTTTATGTAGATGATATGTTGATAGCTGCAAAGAAGAAGTATGACATTCAGAAGCTGAAGGGTTTACTTAGTGCTGAGTTTGAGATGAAGGATCTGGGAGCCGCTCGGAAGATTTTAGGGATGGAGATCATTAGAGACAGAGAGAGAAGGAAACTTTTCTTGTCACAGAGAAGCTACATTCAGAAGGTCTTGGCGAGGTTTGATATGTCTTCATCTAAGCCCATTGATACCCCCAGTGCTGCCAATATCCATCTCACTGCCATGTTCGCTCCACAGTCAGAAGAAGAGAAGGAGTATATGTCACGAGTCCCTTATGCCAGTGCCGTAGGAAGTTTGATGTATGCTATGGTCTGTACAAGGCCAGATTTAGCACATGCAGTCAGTGTAGTGAGCAGATTCATGGGACAACCAGGGAGAGAACATTGGCAGGCTGTGAAGAGAATTTTCCGGTACCTTAGAGGTACATCTGACGTTGGTCTCATTTATGGAGGTAATACTCAGTGCTTGGTTACTGGCTATTCTGATTCAGACTATGCTGGAGATGTTGACACAAGAAGATCGATGACTGGCTATGTGTTTACCCTTGGAGGATCTGTCGTCAGTTGGAAGGCAACTTTGCAACCTACAGTGACTTTGTCTACTACGGAAGCGGAGTACATGGCCTTGACAGAGGCTGCAAAAGAAGGGATTTGGTTGAAAGGGCTGGTTAGCGATCTTGGTCTGCATCATGATCAGGCTACGGTGTATTGTGACAGTTTGAGCGCAATTTGTCTAGCCAAGGATCAAGTCCATCATGAGAGAACCAAGCATATTGACGTAAGGTATCATTTTCTGAGAAGTGAGAAGAGAATCAAGGTGAAGAAAGTAGGAACTGCTGATAATCCTGCTGATATGTTTACAAAGCCGGTTCCACAGAGCAAGTTTCAACACTGTTTGGACTTGCTCAACATCAGAAGCTGTTAATTGCCCTGCGGGGCAACTCTGAGGAAGATGGGGAGGCCTGACACTATCATAGTGCGTCTGAAGAATCTGTTCGGAGAATTCAAGTCAAGGTGGAGATTTGTTGAATGCCTTGAATTGGGCCCTTAATTTTCTATTGATTCTGTATGTTGGGCCCAAGCCTGTTAGGGCGTAGCTTAGCACTATATATAGACGCTATGGGAAACCCTATTCTGTAATTCTATTCTTGCCTCTCCATAATAAAACTGTCCCCCTCTTCCCGTGGACGTAGCCAATTTATTGGTGAACCACGTAAACTGTTGTCTTGTTTTTCGCATTTATATTTTCTCGTATTATCTCAAATTCCGCACAACAAAAATTGTATATAGAAATTTGTAACTTTGTTTCATTATTCTCATGTATCTAGAATAAAGTTCTCCCTTTTCACATATATATGTGTAGAGTTCATATCATTTTAAATTTTAATTTTAAATCTTTTTACGAATTAAGTCCTACATAGTATGATCTTGGTACTATTTATTATTTCATGGGTGATCATTCCCAAAATTGAATGATCCCAGTAAATGTACAATACATTAACATTAATATATAATATGTTTATGATATATGAACTTTTTAGTTTTGTTTTCTCTCAATATTTTTTCATTGCAGGGTTAAATCTCTATCCGTTAACATTCAAGCTAAGAATAGATCCTAGCACTAAAATGACCCAATATAAATGGAAGAACTATGTGAACTCTGAAGCTCTACTTACCCAAATAGATACAACACTAAACCTAGTTACACATCTAGTGCAAGATGTTCTTTCTAACACATCTTCTTAAGGAAACAAACCCAGAAATTTAAAAAAGCATGTATCTTGATTTTTTTTACTCGTAAGATACACGTATCTCAATTTTTTAACTCTCGAATACATGGCAACTGGAAAAAAAAAAGACATCCGTGGCTCAAGGAAATTAGAGGGGGAATACTTAATTAGATGACTGATTAATTATGATCAACATTATGTGAATGTATATGATGGAAATATAGCTAAATTCCTTAATCACTTTTTGTGAAATAATATTTATTTTGATAAAGAGAATATGAATAGTAATTTTTCTAACTTCTACCCTTATTTAGAAGGGACGGTTTAGAGGACTAACACTGCATAAGAAAATTGTACCAAAAGCAAAGTAAATTGTACTACTTTTGCTCTGTCTGGCCCATATTTATTGGCAATAGTTGCTTTACATCCACGTGTAAGAAATTGGAATCACCTCTGCTTTTGAAATAAATAAATTGTCTCTCTTTGCAAACTATAAACATCTCTATCACTTTCTCTTTTTATCTTGAAATGGGTGAGTTCTTTTTGTCCCATGTATTATATGTGATAATTGTAAAATGTCTATTTTTATCCTTCAATTCCTAATTTATTTCCAGTTCTTTTTGGTATTTATTGGATATTATGATTTTTAATGCATTGTTGTAAGATATTATTCTTGCATGTTACTAATTCGGTTTGATTTAATCAGGGTTGTTCGAAAATTGATTTCTCCATTTTTTTACTAGATGGTGTGATGTAGTACTGTAGCGCATCTAGAGCTTTTTTGTGGGTTTTTGTTCTTTTAGAACTTGTCAATTTTTTTTTCTATTTGTGCAAGTTTGAGCTCCCTATTTTGAAAGTTAAATTTTTATTTTGAATTTTGAATTTGACTTGAGAGTTGTATTGTGAATGGCTTAGGAAAATAACAAAGATAGCCTATATGTAGAGCAATGAAACTCGAACGTGAATTTGGGGAAACAACAAACGTCTATTTCCATCTTAAGAGTAGTTCCATTTTTTTAAAAAAAAATGAGAAAAAATCATGTGAATGTAGAGTAACGCATGTTTTTCTTTCCTCCTTTGAATTGCTTCCCTTTCATATCAATCTGCTAATATTGATCCATTTGACAACTAATTTTAATGTTTTCTTATTTTTCTAGCATATGGAAAGATGCAAGCACAAGGTGGATAAGCTGATAGGAAAAAACATGTTCTCGGGATCACTAGAACCCTTTGGGATGCTTCAACCAATAATGAAAGCATATAGTTTTTCTCCACCGTATTACAGTAACAAAATTTTTTTTCATAAGTTCCTTTTGGCTCATTTGGTGTCGAATGCACAAGCAGAGCAGAGAAGAACAAGGTAAACGTAATGGTAGCACAATGTAATTATAGAAAACTTCAGTATTTAGGATAGAAAGTCGACTGGTCCGTTAAAAGTTTTCTTATTTTGCATAAATTACTTTAAGTGTTCTCAATAGAGTTATAGCGTGACATGTGGATGGATTTTCCTAAATTGTTATTGCATTCGTATATAATTTTATGCACTACTTTTGAAGTATCCGACACGAAGAGTCCAAGCAACATAGCAAGTAGAAAAAAGTGTCCCCGCAAATGCAGCAATAAGAAGAAAGGTCTTTGGTTATCCAGGAGGTGACACTGTTGTTGTGATAAACCCTGTTGTCGAAATCAAAATTCTTCGGAAGAGCCGATTAAACACTCTTGAGCAAAAGAAAAGCAAATACGACTGAAGATTTTTACTTCCCTCTCTTTTACCAATAATGAAAGATATGAATGCATTCCCTTGCCTAGATGAAAGGTATATCAAGTAATATCATTATATATAGTTAGATTGATGATCTATTATCAGGTTGTTTATGGATGTTCATGCAAATCGAACAATCTTCTTCTTGATGTTGTGATCCTGTGCATTACAGTTTAGATTACATTTCAATATTGACATTTTAAACTTGAAGTATAGTTTATACAGAACAACTCACAATAACTCTAACTTAAATAGCTTGATTTCTGAAAATACCATATTAACAAAAATGACAAGCTTTATTAATATTAAAATGGATGAAAGCTAAAAAAATAATTCAGACACACATATAGGTCAACTGGTGATATATTATTCCATATTTGCTTTTGTACTTTTTCACTATAGTAAATATTTTTATGATGATCGACATGTCAACTTTTTGTCTACTTTGTATTAAATTGTTCAGGTTGTACATTAGCTTGGATAGTAGTAAATTTATCATTTTTTAATACAATTATCTACAACTCATTTTATTTGTACTTAAATAGATAGTAGTAACCAATGAACTCATAACGCTTATCTTAAGATTCCATATTCAGACCATAAAAACTACATATCTATTTTATCACTCATTGGTGGAAAGTCTAAATCTATAACTATATGATATTTCATTCCAGGCATTTTTGATAAAAGCAAGCTGAGAATAGAGTCATATTTGGTGAACATTTCTTCAGCTGGACACTTAAATCGGGGATCGACTCTAAAACCTTTCCTGGGTACATGTATAGGGTGTCAAAGTTGAACTAGGAAGCATCCGTACTAGCATGTGACATCTTCGACTTTACCCGTCTTTGGAGTCTATTTGTAAGTCCAAATTTATGGATGTTCAGAAAGAACTTGATTGATAATATCGTTTTTTCAGTTCATAGCGTTGGTTTGATATTTGAGATCTGTTTATGTTGTAAATGTGCAAAGTCTAATCTTTTGATTGTAAAAAAAAGGATTATAATCTTAGGCTATGAAATTTATACATCACTTCCCTTGCGGTTAGTATTTATTTTTTAATGCTCAAATGTCCTCTTTATTCATGTTTTCTTTGTGAATTCTAGCCTCAGGAGTATCTATCGGATAAAAATAGCAGTAACAACAAGTAAAGAGGATTGAAGCAACAATGTCTTTGACGAAATTTTCCAGTGAAAGAAAGATCACCAACAAGTTTGTTTAACTCTTTTTCTACAACTATCTACTATCAAGCTCATCGCTTAGCATGGACGTTAATCATCGATATTTCTTTTGTCATGCTATTCTCTACATTATGCTTCATATACAAAAGACATATGTCTTGAATCGAAAATGAACACTCATTTAGTTGAATTAAGATACTGAATGTTGTCACAATTGTTTACTTGGTGTTTAAATGAACTTTATTTGAAGTATCATACCATTATTCAATGGTATTGAAAAATTGAGGATAAGTATAACGTTTTAATTAAATTTTAGTTAAAATTGTGAGTTTGAGTTGTAATTTATCCTATCTGAAACTGCTTACTCTAGCAATATGTTGGTATCTCATATTGAGAAGTACATTGTTGCTATTCCTGGCCCAGTTCACTATATTTTTATGAAATTCTTTGATCTCTACAGGTTTATTTGTTTTTTGCTATGAATAACTTTGGATATATTGGTGCTACTCCTAGCCTGATTCACTATATCTCTAATTTTCTATTGAATAGTGAAAATGTAGGTTTTGAAGTGATTTACTAATACATTATATGTGTACATTTTGATTTTTTTTAGAAGAAATCACAATGGACATTCTTTTGTTTGACCAACATCTAAGATTATCAGTTTCATGTGTTATTATAAACTGTCAAATATTTAATCTATTCAGTAGGTAACTTTCTGATTTAGTCTGCTTAGTTCAAGTTTTATGAATTTGATGAAAAAACATTTGGAATGATTAGCAATTAGTACTTTTCGATCCTTGCTCACTTTAACCATTATATATCGTTAGTGAGGTAAGTAATCGAAAAAACAATCGAATTCTAGAAACAGAACAGATTAGATCATGGAAAAGGATTGATTATAAATTCTCTTATTATCATTTCTTCAGGTATAATTTTACATGGCTAAAGATGAAAATTGACCTTGATAGGCTTTAATAGAAACTTGTGTTGACTACTTCTGGCCTGTGGAAAGCAGATATGTACAAGAGTTGAAAAGTTAATGTTTTTTTAAATGATATGTTGTAAATGCGGAATGTTTCCAATTACTTTTTTGTTGATCAGGCGACATCCGAATTTGAACTGGGAAAAAAAGGATTTGCAATCCTCTTAGAGTCTTTTACCATGTCTGCTCTTTACTTGATCATCTCTTTCATTGATACATCGAGATTACTTGAATAAATTATTTCTGTAGTTTATACTGCTAAATTTAAAATTTATGGAGATCGAACTTGCAATGTTGGGCCTGTGCTCAGCACGGGCCATGCCTCTCTAGTTAAAAAAATAAAGGATAGAATTTAAAATAAAGAGATATTAAAGTATTCATTTTCTATTTTGTTTCTAAACGTAGAAAATGAAAAATAAAATAAAGTTGAGTCGGGGATGACCTTACCCTCTCTACGTCCACATGCAACGCTATCACCATTTGCAATGCAACTTGTCGTTTGTCTAATGGATATTATTATTATTTCCTTATTAAGAGTTGTGCACAACTCTCCCAAAAATAGGAGAGGATTCGTATATCTTTTACACTTTGAAGTTATGTCAAAATGTCGATGCTTTCGTAGAATTTAATACAAAATTCATGTGTTTGAGTCTTGATGAAAATTAAAAATAAGAATATTTTATATCATTCGTTTTAATTTTAAGGGAAAATGTCCAAGTACCTCCTCAACCTATACCCGAAATTCCAGAGACATACTTATACTATACTAAGGTCCTATTACCCCTGAACTTATTTTATATGTAATATTATACCCTTTTTAGCCTACGTGGCACTAGTTCAAAAAAAAAGTCAACCATCGTTGGGCCCACAAGATAGTGCCACGTAAGCTAAAAAGGGTAAAAAATTATTAATAAAATAAGTTCAAGAGTAATAAGACCTTAGTATAGTATAAGTGTGTCTCTGATATTTCGGGCATAGGTTAAGAGGTACTTGGGCATTATCCCAATTTTAATGAAAATAAAAACAAATAAGATAAAGAGTATTTTATATGGATGAGAAGAGCTCTCTATAAGTTCCGAGTGTTTTCACTTAACCACGGTAGAGAAGATGACTGACTGACATATTTTATTACCCATGGATTTATTTCTAATTGTTGTTACATTAGCTACCTCCTTTATTCTACTTTTCATTCTTCATAAACAATTTTACTCAGTTAAAAAGCAGAGTAGTAGTAGTAGAAAGGTACCTGAAGCTGGCGGAGCATGGCCTATTATCGGCCATCTCCACCTTCTCGGTGGATCTGAATCTGATCACTTGCCTCACAAAATGTTGGGCCGCTTGGCAGATAAGTACGGGCCTATTTTCGGAATGAAGCTTGGAGTTCATCAGGTTGTAGTTGTGAGTGATCACAAATTAGCAAAGGAGTGCTTCACAACTAACGATTTAGCCCTAGCAGGTCGGCCTAAATCAATGGCTTCAGAGATTATAGGCTACAAACATGCTATGTTTGGACTTTGTTCTTACGGTCCGTACTGGAGAGAAACAAGGAAAATTGCCACAATTGAACTTTTCTCCGCTCGACGAATCGAGATGCTCAAACACATCAGAGAATTTGAGGTAAAATCAGGTATTAAAGAGATTTATAATAATTGGGAGAAGAATAATTTAAATGGTGTTGTGAAGATGGAGATGAAGGAATGGATTGGGGATTTATTTATGAACACTATGGGGAAAATATTATTCGGAAAAGGGCGAAGGAGTAACGAGGACGAAGGAATAAATAAAGCTCACAAAGCAATTCGAAGATTTTTCGAATTGTTAGGAGTTTTTGTTGTGGCTGATTTTTTACCTTATTTAAGATGGCTGGACATTGGAGGCCATGAGAAAGCGATGAAGGAGGTTTCTAAAGAAATGGACTCTGTTGTTGAAGAATGGTTAACAGAGCACAAAACGAAGAGAGGAATTATTAAATCTGGTGAAGAAGAAGATTTCATGGATGTAATGCTTTCCGTTTGTGAAGACAGAGATCTACCTGGAGTTGATGCCGATACCGCTATCAAAGCTACATGTATGGTACGTTACTTCTGATCAAATTACTCTAAAATTGTATGATCACGTATATGGTTCCGATTGTTGAATTTGTCTTGTTTAGGCTCTGCTATCGGCAGGCACAGACACAACGATGGTAACTCTAACATGGATTTTATCTCTACTACTCAACAACTATCAATCACTTCAAAAGGCTCAAGATGAGCTAGACGCTCATGTTGGCAAGAATAGATGGGTCCAAGAATCCGATATAAAAAACTTAGTTTATTTTCAAGCTATTGTTAAAGAAGCATTACGTTTATATCCAGCTGGACCGCTCTCTTTACCACACGAGTCGATGGAGGATTGTACTATCAGTGGGTATGATATACCAAAAGGCACTCGCTTATTAGTGAACATATGGAAGATTCAGCGCGATCCTAATATATGGCCAAATCCTCACGAGTTTAAGCCAGAGAGGTTCTTGTCGACCCACAAGGATGTCGATGTAAAGGGCAATCACTTTGAGTTAATGCCATTTGGTAGTGGAAGAAGAATGTGCCCTGGA</genome_strand>
        <mrna_strand>TCTCCCAAAAATAGGAGAGGATCCACAGTAACTGTCTTTTCCACACCAAAAAGTTATGTCAACGCTTTCGTATACAAATTCATATTTACGATTCATGCGTCTAAGTTTTCATAAAAATAAACAAGGTAAGAGTGTTATCACTTACCCCAATCTCTCTACATAAATTTCAAGTGTCTCACATCGAAGAAGACGACTGATAAATTTTATTAGCAATGGATCCCTTTCTAATTGCTGTTACATTAGCTACCTCCTTTTTTCTAATTTTCTTTCTTCAGAAACAATTTTACTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................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AGTTGATGCCGATACCGCTATCAAAGCTACAT....................................................................................GCTCTGCTATCGGCAGGCACAGACACAACGATGGTAACTCTAACATGGATTTTATCTCTACTACTCAACAACTATCAATCACTTCAAAAGGCTCAAGATGAGCTAGACGCTCATGTTGGCAAGAATAGATGGGTCCAAGAATCCGATATAAAAAACTTAGTTTATCTTCAAGCTATTGTTAAAGAAGCATTACGTTTATATCCAGCTGGACCACTCTCTTTACCACACGAGTCGATGGAGGATTGTACTATCAGTGGGTATGATATACCAAAAGGCACTCGCTTACTAGTGAACTTATGGAAGATTCAGCACGATCCTAATATATGGCCAAATCCTCACGAGTTTAAGCCAGAGAGGTTCTTGTCGACCCATAAGGATGTGGATGTAAAGGGCAATCACTTTGAGTTAATGCCATTTGGTAGTGGAAGAAGAATGTGCCCTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U345812" ref_strand="+" ref_description="SGN-U345812        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT4G23160.1 | Symbol: None | protein kinase family protein, contains Pfam domain PF00069: Protein kinase domain | chr4:12129496-12134198 FORWARD | Aliases: F21P8.50, F21P8_50 (evalue: 2e-39, score=159) genbank/nr: gi|77548751|gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa (japonica cultivar-group)] >gi|62701868|gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa (japonica cultivar-group)] (evalue: 1e-101, score=372)">
      <seq>gtttccaagttccagggaaggaaaatcacgtctgcaagttgaagaagtccttatatggacttaagcagtctccaaggcagtggtataaaaggtttgacagctatatggtgaagttgggctatactcggagctcatatgattgttgtgtctactacaataggctcaatgatgattcattcatctatctggtgctttatgtagatgatatgttgatagctgcaaagaagaagtatgacattcagaagctgaagggtttacttagtgctgagtttgagatgaaggatctgggagccgctcggaagattttagggatggagatcattagagacagagagagaaggaaacttttcttgtcacagagaagctacattcagaaggtcttggcgaggtttggcatgtcttcatctaagcccattgatacccccagtgctgccaatatccatctcactgccatgttcgctccacagtcagaagaagagaaggagtatatgtcacgagtcccttatgccagtgccgtaagaagtttgatgtatgctatggtctgtacaaggccagatttagcacatgcagtcagtgtagtgagcagattcatgggacaaccagggagagaacattggcaggctgtgaagagaattttccggtaccttagaggtacatctgacgttggtctcatttatggaggtgatactcagtgcttggttactggctattctgattcagactatgctggagatgttgacacaagaagatcgatgactggctatgtgtttaccctgggaggatctgtcgtcagttggaaggcaacttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0223O22.1" temp_strand="-" temp_description="C04HBa0223O22.1  CU459025.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0223O22 sequenced_by:sanger upload_account_name:uk">
        <position start="116563" stop="115156"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116263" g_stop="115456" g_length="808"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="808" r_length="808" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0223O22.1" gen_strand="-" ref_id="SGN-U345812" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>808</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0223O22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U345812" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116263" e_stop="115456"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCCAAGTTCCAGGGAAGGAAAATCACGTCTGCAAGTTGAAGAAGTCCTTATATGGACTTAAGCAGTCTCCAAGGCAGTGGTATAAAAGGTTTGACAGCTATATGGTGAAGTTGGGCTATACTCGGAGCTCATATGATTGTTGTGTCTACTACAATAGGCTCAATGATGATTCATTCATCTATCTGGTGCTTTATGTAGATGATATGTTGATAGCTGCAAAGAAGAAGTATGACATTCAGAAGCTGAAGGGTTTACTTAGTGCTGAGTTTGAGATGAAGGATCTGGGAGCCGCTCGGAAGATTTTAGGGATGGAGATCATTAGAGACAGAGAGAGAAGGAAACTTTTCTTGTCACAGAGAAGCTACATTCAGAAGGTCTTGGCGAGGTTTGATATGTCTTCATCTAAGCCCATTGATACCCCCAGTGCTGCCAATATCCATCTCACTGCCATGTTCGCTCCACAGTCAGAAGAAGAGAAGGAGTATATGTCACGAGTCCCTTATGCCAGTGCCGTAGGAAGTTTGATGTATGCTATGGTCTGTACAAGGCCAGATTTAGCACATGCAGTCAGTGTAGTGAGCAGATTCATGGGACAACCAGGGAGAGAACATTGGCAGGCTGTGAAGAGAATTTTCCGGTACCTTAGAGGTACATCTGACGTTGGTCTCATTTATGGAGGTAATACTCAGTGCTTGGTTACTGGCTATTCTGATTCAGACTATGCTGGAGATGTTGACACAAGAAGATCGATGACTGGCTATGTGTTTACCCTTGGAGGATCTGTCGTCAGTTGGAAGGCAACTTT</genome_strand>
        <mrna_strand>GTTTCCAAGTTCCAGGGAAGGAAAATCACGTCTGCAAGTTGAAGAAGTCCTTATATGGACTTAAGCAGTCTCCAAGGCAGTGGTATAAAAGGTTTGACAGCTATATGGTGAAGTTGGGCTATACTCGGAGCTCATATGATTGTTGTGTCTACTACAATAGGCTCAATGATGATTCATTCATCTATCTGGTGCTTTATGTAGATGATATGTTGATAGCTGCAAAGAAGAAGTATGACATTCAGAAGCTGAAGGGTTTACTTAGTGCTGAGTTTGAGATGAAGGATCTGGGAGCCGCTCGGAAGATTTTAGGGATGGAGATCATTAGAGACAGAGAGAGAAGGAAACTTTTCTTGTCACAGAGAAGCTACATTCAGAAGGTCTTGGCGAGGTTTGGCATGTCTTCATCTAAGCCCATTGATACCCCCAGTGCTGCCAATATCCATCTCACTGCCATGTTCGCTCCACAGTCAGAAGAAGAGAAGGAGTATATGTCACGAGTCCCTTATGCCAGTGCCGTAAGAAGTTTGATGTATGCTATGGTCTGTACAAGGCCAGATTTAGCACATGCAGTCAGTGTAGTGAGCAGATTCATGGGACAACCAGGGAGAGAACATTGGCAGGCTGTGAAGAGAATTTTCCGGTACCTTAGAGGTACATCTGACGTTGGTCTCATTTATGGAGGTGATACTCAGTGCTTGGTTACTGGCTATTCTGATTCAGACTATGCTGGAGATGTTGACACAAGAAGATCGATGACTGGCTATGTGTTTACCCTGGGAGGATCTGTCGTCAGTTGGAAGGCAACTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U330105" ref_strand="+" ref_description="SGN-U330105        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: AT4G23160.1 | Symbol: None | protein kinase family protein, contains Pfam domain PF00069: Protein kinase domain | chr4:12129496-12134198 FORWARD | Aliases: F21P8.50, F21P8_50 (evalue: 3e-26, score=115) genbank/nr: putative(evalue: 9e-48, score=192)">
      <seq>tacgtcagaaactaggagtcttgacaaacaggtggagtttcaagtcattcagaacgagagcgatttaaaggaacctgaagaggaggatcaagagccacagactgaaactgatattccagaatctatgccatcagatatccatcagagtatagctcaagatcggccaaggagggttggagttcggccacctacgaggtatggttttgaggacatggtgggttatgcactgcaggttgctgaagaggtagatacatctgagccgtctacttacaaagaagccattttaagttctgattctgaaaaatggtttgccgctatgggagatgagatggagtccctacacaagaatcagacatgggatctggtcatacagccttcggggagaaagattattacttgcaaatgggttttcaagaagaaggaagggatatcaccagcagaaggagtcaagtataaagtcagggttgttgctagaggtttcaaccaaagagagggagtggactacaatgagatcttctcaccagtggtcagacatacttccatccgagtgttactagcgatagttgcacatcagaatctggagcttgaaacacttgatgtgaagacagcgtttctacatggagagttggaggaagagatatacatgact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0223O22.1" temp_strand="-" temp_description="C04HBa0223O22.1  CU459025.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0223O22 sequenced_by:sanger upload_account_name:uk">
        <position start="117222" stop="115974"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116922" g_stop="116274" g_length="649"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="649" r_length="649" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0223O22.1" gen_strand="-" ref_id="SGN-U330105" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>649</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0223O22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U330105" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116922" e_stop="116274"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACGTCAGAAACTGGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGAGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACAAAAACTGATATTCCAGAATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGCCAAGGAGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGTTGCTGAAGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTTCTGATTCTGAAAAATGGTTTGCCGCTATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGATCTGGTCATACAGCCTTTGGGGAGAAAGATTATTACTTGCAAATGGGTTTTCAAGAAGAAGGAAGGGATATCACCAGCAGAAGGAGTCAAGTATAAAGCCAGGGTTGTTGCCAGAGGTTTCAACCAAAGAGAGGGAGTGGACTACAATGAGATCTTCTCACCAGTGGTCAGACATACTTCCATCCGAGTGTTACTAGCGATAGTTGCACATCAGAATCTGGAGCTTGAACAACTTGATGTGAAGACAGCGTTTCTACATGGAGAGTTGGAGGAAGAGATATACATGACT</genome_strand>
        <mrna_strand>TACGTCAGAAACTAGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGCGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACTGAAACTGATATTCCAGAATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGCCAAGGAGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGTTGCTGAAGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTTCTGATTCTGAAAAATGGTTTGCCGCTATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGATCTGGTCATACAGCCTTCGGGGAGAAAGATTATTACTTGCAAATGGGTTTTCAAGAAGAAGGAAGGGATATCACCAGCAGAAGGAGTCAAGTATAAAGTCAGGGTTGTTGCTAGAGGTTTCAACCAAAGAGAGGGAGTGGACTACAATGAGATCTTCTCACCAGTGGTCAGACATACTTCCATCCGAGTGTTACTAGCGATAGTTGCACATCAGAATCTGGAGCTTGAAACACTTGATGTGAAGACAGCGTTTCTACATGGAGAGTTGGAGGAAGAGATATACATGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U336371" ref_strand="+" ref_description="SGN-U336371        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT4G31950.1 | Symbol: None | cytochrome P450 family protein, cytochrome P450 monooxygenase, Pisum sativum, PATCHX:G894153 | chr4:15455169-15457127 FORWARD | Aliases: F11C18.9 (evalue: 2e-54, score=209) genbank/nr: gi|78100210|gb|ABB20912.1| P450 mono-oxygenase [Stevia rebaudiana] (evalue: 3e-60, score=234)">
      <seq>ggaaaagggctaacgagtaatgatgaccaaagaatggataaggctcacaaagcaattctgaagatttttcgaattgttaggagcttttgttgtggctgattttttaccttacttaacatggctggacattggaggtcatgacaaagcgatgaaggaggtttctaaagaattggactctgttgtagcagaatggttaacagagcacagaacaaagagaggaattattaaatctggtgaagaagaagatttcatggatgtcatgctttccatttgtgaagacagagatctgcttggattcgatgccgataccgctatcaaagctacatgtatggctctgctatcggcaggtacagacacgacgattgtaactctaacgtggactttatctctactactcagtaactatcaatcacttcataaggctcaagatgagctagacgctcatgttggcaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0223O22-gREoB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0223O22.1" temp_strand="-" temp_description="C04HBa0223O22.1  CU459025.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0223O22 sequenced_by:sanger upload_account_name:uk">
        <position start="122809" stop="121682"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="122509" g_stop="122180" g_length="330"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="331" r_length="331" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="122179" i_stop="122105" i_length="75">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="122104" g_stop="121982" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="332" r_stop="454" r_length="123" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0223O22.1" gen_strand="-" ref_id="SGN-U336371" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>453</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0223O22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U336371" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="122509" e_stop="122180"/>
          <exon e_start="122104" e_stop="121982"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAAAGGGCGAAGGAGTAATGAGGACGAAGGAATAAATAAGGCTCACAAAGCAATTC-GAAGATTTTTCGAATTGTTAGGAGCTTTTGTTGTGGCTGATTTTTTACCTTACTTAAGATGGCTGGACATTGGAGGCCATGAGAAAGCGATGAAGGAGGTTTCTAAAGAATTGGACTCTGTTGTTGCAGAATGGTTAACAGAGCACAAAACAAAGAGAGGAATTATTAAATCTGGTGAAGAAGAAGATTTCATGGATGTCATGCTTTCCATTTGTGAAGACAGAGATCTGCTTGGATTCGATGCCGATACCGCTATCAAAGCTACATGTATGGTACGTTAATTATTCCAAAATTGTTTCTATCTTGATCTCGTATATGAATTTGATTGCTGAATTTGTCTTGTTTAGGCTCTGCTATCGGCAGGTACAGACACGACGATTGTAACTCTAACGTGGACTTTATCTCTACTACTCAATAACTATCAATCACTTCAAAAGGCTCAAGATGAGCTAGACGCTCATGTTGGCAAG</genome_strand>
        <mrna_strand>GGAAAAGGGCTAACGAGTAATGATGACCAAAGAATGGATAAGGCTCACAAAGCAATTCTGAAGATTTTTCGAATTGTTAGGAGCTTTTGTTGTGGCTGATTTTTTACCTTACTTAACATGGCTGGACATTGGAGGTCATGACAAAGCGATGAAGGAGGTTTCTAAAGAATTGGACTCTGTTGTAGCAGAATGGTTAACAGAGCACAGAACAAAGAGAGGAATTATTAAATCTGGTGAAGAAGAAGATTTCATGGATGTCATGCTTTCCATTTGTGAAGACAGAGATCTGCTTGGATTCGATGCCGATACCGCTATCAAAGCTACATGTATG...........................................................................GCTCTGCTATCGGCAGGTACAGACACGACGATTGTAACTCTAACGTGGACTTTATCTCTACTACTCAGTAACTATCAATCACTTCATAAGGCTCAAGATGAGCTAGACGCTCATGTTGGCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>22</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="13065" PGL_stop="14242"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="13065" e_stop="13531"/>
            <exon e_start="13750" e_stop="13921"/>
            <exon e_start="13994" e_stop="14242"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="0.976"/>
          <exon-intron don_prob="0.999" acc_prob="0.940" e_score="0.988"/>
          <exon-only e_score="0.940"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.976">
            <gDNA_exon_boundary e_start="13065" e_stop="13531" e_length="467"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="13532" i_stop="13749" i_length="218"/>
          </intron>
          <exon e_serial="2" e_score="0.988">
            <gDNA_exon_boundary e_start="13750" e_stop="13921" e_length="172"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.940">
            <gDNA_intron_boundary i_start="13922" i_stop="13993" i_length="72"/>
          </intron>
          <exon e_serial="3" e_score="0.940">
            <gDNA_exon_boundary e_start="13994" e_stop="14242" e_length="249"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13065" stop="13531"/>
              <exon start="13750" stop="13921"/>
              <exon start="13994" stop="14242"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U341232" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGTTTCTATGAAAAGAGAATTCCGTCTTGTTCAGAAGCAAAATTAACAATCTTACTCTCAGCTAAGAAAGAAATTAGTGTGTTGGGTTGGAGAAGAAAAAGTAAAATTCCATGTCACACAGCTTTCATCAACAACAAGGATTTTACAATTTCTCAAATGTATATGAGAGATCTGCAACGACGACGACGAAGCATGAAGATATGTTAAGAGTACAAGGCTTTGAGCCACAGCAAGTTGAAGTAGCAGCGGCGGATGTTGAGCCGCCGCCTACTGCAACGGTTTATGACGATGGTGGAATGTTGACGGAGATTATCAGCTACCCATCTGCGTGGCGGAAAACCGCCACGGAGATATTGGACGATCAGATCCAATCGAGTAATTATCGATCGTGGCCACAAAAGGAGCAGCAGCATCTTCAGCAGCAGCAGCAACAACTTCTTCCACAATCAATAATAAACGATACTGAG : CTTCCTCTAATGAATCCTCATATTAAACCGTCATCTCCGCCTCGCTCTTCATCTTCACTTCACATGTTACTTCCAAACTCAGTAGACACAAACAATCTTCTTCATCATCAAGGATTTCACTTGCTTAATCCAGCACCCGTGGAAACTCCGTCTCAATTCACATGGATTCCAG : GTAGTAGTAGTGGAGAGGACAATTCCGCTAGGATTGGAAGGGTTGTGGATGGTCAAGGTCTTTCCTTATCGCTTTCTAGAAATTTCGAAGCTGCTGCAAAATTGGAAGACTTGAGAATCGGAAACGGTGAAATTTACTTGCATAATAATCAAGGACTATTAGGTCCGATTAATAACAACAATCATCACCACCATCACCATCAACTGTTACATTCAGGAGTAATTATGGATCATCGTACTCCTCCTCATC</gDNA_template>
            <first_frame> R  F  Y  E  K  R  I  P  S  C  S  E  A  K  L  T  I  L  L  S  A  K  K  E  I  S  V  L  G  W  R  R  K  S  K  I  P  C  H  T  A  F  I  N  N  K  D  F  T  I  S  Q  M  Y  M  R  D  L  Q  R  R  R  R  S  M  K  I  C  *  E  Y  K  A  L  S  H  S  K  L  K  *  Q  R  R  M  L  S  R  R  L  L  Q  R  F  M  T  M  V  E  C  *  R  R  L  S  A  T  H  L  R  G  G  K  P  P  R  R  Y  W  T  I  R  S  N  R  V  I  I  D  R  G  H  K  R  S  S  S  I  F  S  S  S  S  N  N  F  F  H  N  Q  *  *  T  I  L  S :   F  L  *  *  I  L  I  L  N  R  H  L  R  L  A  L  H  L  H  F  T  C  Y  F  Q  T  Q  *  T  Q  T  I  F  F  I  I  K  D  F  T  C  L  I  Q  H  P  W  K  L  R  L  N  S  H  G  F  Q  :  V  V  V  V  E  R  T  I  P  L  G  L  E  G  L  W  M  V  K  V  F  P  Y  R  F  L  E  I  S  K  L  L  Q  N  W  K  T  *  E  S  E  T  V  K  F  T  C  I  I  I  K  D  Y  *  V  R  L  I  T  T  I  I  T  T  I  T  I  N  C  Y  I  Q  E  *  L  W  I  I  V  L  L  L  I </first_frame>
            <second_frame>  V  S  M  K  R  E  F  R  L  V  Q  K  Q  N  *  Q  S  Y  S  Q  L  R  K  K  L  V  C  W  V  G  E  E  K  V  K  F  H  V  T  Q  L  S  S  T  T  R  I  L  Q  F  L  K  C  I  *  E  I  C  N  D  D  D  E  A  *  R  Y  V  K  S  T  R  L  *  A  T  A  S  *  S  S  S  G  G  C  *  A  A  A  Y  C  N  G  L  *  R  W  W  N  V  D  G  D  Y  Q  L  P  I  C  V  A  E  N  R  H  G  D  I  G  R  S  D  P  I  E  *  L  S  I  V  A  T  K  G  A  A  A  S  S  A  A  A  A  T  T  S  S  T  I  N  N  K  R  Y  *   : A  S  S  N  E  S  S  Y  *  T  V  I  S  A  S  L  F  I  F  T  S  H  V  T  S  K  L  S  R  H  K  Q  S  S  S  S  S  R  I  S  L  A  *  S  S  T  R  G  N  S  V  S  I  H  M  D  S  R :   *  *  *  W  R  G  Q  F  R  *  D  W  K  G  C  G  W  S  R  S  F  L  I  A  F  *  K  F  R  S  C  C  K  I  G  R  L  E  N  R  K  R  *  N  L  L  A  *  *  S  R  T  I  R  S  D  *  *  Q  Q  S  S  P  P  S  P  S  T  V  T  F  R  S  N  Y  G  S  S  Y  S  S  S   </second_frame>
            <third_frame>   F  L  *  K  E  N  S  V  L  F  R  S  K  I  N  N  L  T  L  S  *  E  R  N  *  C  V  G  L  E  K  K  K  *  N  S  M  S  H  S  F  H  Q  Q  Q  G  F  Y  N  F  S  N  V  Y  E  R  S  A  T  T  T  T  K  H  E  D  M  L  R  V  Q  G  F  E  P  Q  Q  V  E  V  A  A  A  D  V  E  P  P  P  T  A  T  V  Y  D  D  G  G  M  L  T  E  I  I  S  Y  P  S  A  W  R  K  T  A  T  E  I  L  D  D  Q  I  Q  S  S  N  Y  R  S  W  P  Q  K  E  Q  Q  H  L  Q  Q  Q  Q  Q  Q  L  L  P  Q  S  I  I  N  D  T  E  :  L  P  L  M  N  P  H  I  K  P  S  S  P  P  R  S  S  S  S  L  H  M  L  L  P  N  S  V  D  T  N  N  L  L  H  H  Q  G  F  H  L  L  N  P  A  P  V  E  T  P  S  Q  F  T  W  I  P   : G  S  S  S  G  E  D  N  S  A  R  I  G  R  V  V  D  G  Q  G  L  S  L  S  L  S  R  N  F  E  A  A  A  K  L  E  D  L  R  I  G  N  G  E  I  Y  L  H  N  N  Q  G  L  L  G  P  I  N  N  N  N  H  H  H  H  H  H  Q  L  L  H  S  G  V  I  M  D  H  R  T  P  P  H  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0223O22.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="13169" stop="13531"/>
                    <exon start="13750" stop="13921"/>
                    <exon start="13994" stop="14241"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>783</number_coding_nucleotides>
                  <number_encoded_amino_acids>261</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NSMSHSFHQQQGFYNFSNVYERSATTTTKHEDMLRVQGFEPQQVEVAAADVEPPPTATVYDDGGMLTEIISYPSAWRKTATEILDDQIQSSNYRSWPQKEQQHLQQQQQQLLPQSIINDTELPLMNPHIKPSSPPRSSSSLHMLLPNSVDTNNLLHHQGFHLLNPAPVETPSQFTWIPGSSSGEDNSARIGRVVDGQGLSLSLSRNFEAAAKLEDLRIGNGEIYLHNNQGLLGPINNNNHHHHHHQLLHSGVIMDHRTPPH</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="14283" PGL_stop="15651"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="14283" e_stop="14571"/>
            <exon e_start="15341" e_stop="15651"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="14283" e_stop="14571" e_length="289"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="14572" i_stop="15340" i_length="769"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="15341" e_stop="15651" e_length="311"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14283" stop="14571"/>
              <exon start="15341" stop="15651"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U346320" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCAAATTCATGTTGGATACGCAGCATCATCACCAAGAATATCAAATGCTCTAAGAAATTCGCGATATGTAAAAGCTACACAAGAGCTACTTGAAGAATTTTGCTGTGTAGGTAGGGGAAATTTCAAAAATCAAAGGGTGAAGAAATTAGACGATGATCAAAACCCTAATTCCAACTCGGAGAGTGAAGATCATCGTGGTCCCTCCAAAGATAATCATCCTCCATTATCAGCTGCTGAGAGATCTGAATATCAACGGAGGAAAATCAAGTTGTTATCTATGCTCGATGAG : GTAGATGCAAGGTACACGCGTTACTGTGAGCAAATGCAGGCGATGGTGAATTCATTCGATTCAGTAATCGGTTACGGTGCAGCAGCTCCATACACAGCGTTAGCTCAGAAGGCGATGTCGAGGCATTTCCGATGTATAAAGGATGCGATTGTTGGTCAATTGAAACAGACTTGTAAGTATTTGGGGGAGAAAGATGTGACGGGAACGAGTGGGTTAACAAAAGGGGAAACACCGAGGTTGAAAATGCTTGATCAGAAATTGAGGCAACAAAAGGCATTACATCAAATGGGAATGTTGGATTCTGATGCTTG</gDNA_template>
            <first_frame> S  N  S  C  W  I  R  S  I  I  T  K  N  I  K  C  S  K  K  F  A  I  C  K  S  Y  T  R  A  T  *  R  I  L  L  C  R  *  G  K  F  Q  K  S  K  G  E  E  I  R  R  *  S  K  P  *  F  Q  L  G  E  *  R  S  S  W  S  L  Q  R  *  S  S  S  I  I  S  C  *  E  I  *  I  S  T  E  E  N  Q  V  V  I  Y  A  R  *   : G  R  C  K  V  H  A  L  L  *  A  N  A  G  D  G  E  F  I  R  F  S  N  R  L  R  C  S  S  S  I  H  S  V  S  S  E  G  D  V  E  A  F  P  M  Y  K  G  C  D  C  W  S  I  E  T  D  L  *  V  F  G  G  E  R  C  D  G  N  E  W  V  N  K  R  G  N  T  E  V  E  N  A  *  S  E  I  E  A  T  K  G  I  T  S  N  G  N  V  G  F  *  C  L </first_frame>
            <second_frame>  Q  I  H  V  G  Y  A  A  S  S  P  R  I  S  N  A  L  R  N  S  R  Y  V  K  A  T  Q  E  L  L  E  E  F  C  C  V  G  R  G  N  F  K  N  Q  R  V  K  K  L  D  D  D  Q  N  P  N  S  N  S  E  S  E  D  H  R  G  P  S  K  D  N  H  P  P  L  S  A  A  E  R  S  E  Y  Q  R  R  K  I  K  L  L  S  M  L  D  E  :  V  D  A  R  Y  T  R  Y  C  E  Q  M  Q  A  M  V  N  S  F  D  S  V  I  G  Y  G  A  A  A  P  Y  T  A  L  A  Q  K  A  M  S  R  H  F  R  C  I  K  D  A  I  V  G  Q  L  K  Q  T  C  K  Y  L  G  E  K  D  V  T  G  T  S  G  L  T  K  G  E  T  P  R  L  K  M  L  D  Q  K  L  R  Q  Q  K  A  L  H  Q  M  G  M  L  D  S  D  A   </second_frame>
            <third_frame>   K  F  M  L  D  T  Q  H  H  H  Q  E  Y  Q  M  L  *  E  I  R  D  M  *  K  L  H  K  S  Y  L  K  N  F  A  V  *  V  G  E  I  S  K  I  K  G  *  R  N  *  T  M  I  K  T  L  I  P  T  R  R  V  K  I  I  V  V  P  P  K  I  I  I  L  H  Y  Q  L  L  R  D  L  N  I  N  G  G  K  S  S  C  Y  L  C  S  M  R :   *  M  Q  G  T  R  V  T  V  S  K  C  R  R  W  *  I  H  S  I  Q  *  S  V  T  V  Q  Q  L  H  T  Q  R  *  L  R  R  R  C  R  G  I  S  D  V  *  R  M  R  L  L  V  N  *  N  R  L  V  S  I  W  G  R  K  M  *  R  E  R  V  G  *  Q  K  G  K  H  R  G  *  K  C  L  I  R  N  *  G  N  K  R  H  Y  I  K  W  E  C  W  I  L  M  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0223O22.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="14284" stop="14571"/>
                    <exon start="15341" stop="15649"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>597</number_coding_nucleotides>
                  <number_encoded_amino_acids>199</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QIHVGYAASSPRISNALRNSRYVKATQELLEEFCCVGRGNFKNQRVKKLDDDQNPNSNSESEDHRGPSKDNHPPLSAAERSEYQRRKIKLLSMLDEVDARYTRYCEQMQAMVNSFDSVIGYGAAAPYTALAQKAMSRHFRCIKDAIVGQLKQTCKYLGEKDVTGTSGLTKGETPRLKMLDQKLRQQKALHQMGMLDSDA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="30622" PGL_stop="26461"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="30622" e_stop="30234"/>
            <exon e_start="29848" e_stop="29718"/>
            <exon e_start="28537" e_stop="28461"/>
            <exon e_start="28332" e_stop="28320"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.943" acc_prob="0.039" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.926" e_score="0.974"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="30622" e_stop="30234" e_length="389"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.993">
            <gDNA_intron_boundary i_start="30233" i_stop="29849" i_length="385"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="29848" e_stop="29718" e_length="131"/>
          </exon>
          <intron i_serial="2" don_prob="0.943" acc_prob="0.039">
            <gDNA_intron_boundary i_start="29717" i_stop="28538" i_length="1180"/>
          </intron>
          <exon e_serial="3" e_score="0.974">
            <gDNA_exon_boundary e_start="28537" e_stop="28461" e_length="77"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.926">
            <gDNA_intron_boundary i_start="28460" i_stop="28333" i_length="128"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="28332" e_stop="28320" e_length="13"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30622" stop="30234"/>
              <exon start="29848" stop="29718"/>
              <exon start="28537" stop="28461"/>
              <exon start="28332" stop="28320"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U317689" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTTTTTTTATAAACTTGTGCTTCCCATTCAAGAACACTAGTGATACTCAATATTCAAGAAATTAAAACAACATTTTTTTCTTCTCAATGGAGGGATTATGTGTAAAGCTTTTTGAAGCATCAAGGTAATTAATAATTTTTCTATATATTTCGATCCATTTTATTTGCTATATTATTACTATATAATATTCTTTTGATGAAATTAAATTATTTTTTTCTAAAGAAAGTACAAAATGAAGAGACATAAAGCTGAAGCAATAGGAATGGTAGTAGATAGTTTTGAGGCAAGTCATGAAGGGATCAAAACTATTGATATCCAAAAACGTTGTGAATTCTCTGGAACTTCTCATCTTTGCATCTATTTCGTCACTTGGAATATGAACGGTCAG : GTACCTTGTGAGGATATAGCAAAATTAGTTGGTGAAGACAGAAAATATGATTTATTGGTGATGGGTTTGCAAGAGGCACCTAGAAATAATATTTGCAAGTTATTGAAGAACACATTGGCTGATACTCATAT : GCTTTTGGGAAAATCAGTAATGCAATCTGTACAACTCTATGTGTTTGGCCCCAAGAATTCAGAGCAATTTACAAGAG : AAGTAAAAGTGGA</gDNA_template>
            <first_frame> F  F  F  I  N  L  C  F  P  F  K  N  T  S  D  T  Q  Y  S  R  N  *  N  N  I  F  F  F  S  M  E  G  L  C  V  K  L  F  E  A  S  R  *  L  I  I  F  L  Y  I  S  I  H  F  I  C  Y  I  I  T  I  *  Y  S  F  D  E  I  K  L  F  F  S  K  E  S  T  K  *  R  D  I  K  L  K  Q  *  E  W  *  *  I  V  L  R  Q  V  M  K  G  S  K  L  L  I  S  K  N  V  V  N  S  L  E  L  L  I  F  A  S  I  S  S  L  G  I  *  T  V  R :   Y  L  V  R  I  *  Q  N  *  L  V  K  T  E  N  M  I  Y  W  *  W  V  C  K  R  H  L  E  I  I  F  A  S  Y  *  R  T  H  W  L  I  L  I   : C  F  W  E  N  Q  *  C  N  L  Y  N  S  M  C  L  A  P  R  I  Q  S  N  L  Q  E  :  K  *  K  W  </first_frame>
            <second_frame>  F  F  L  *  T  C  A  S  H  S  R  T  L  V  I  L  N  I  Q  E  I  K  T  T  F  F  S  S  Q  W  R  D  Y  V  *  S  F  L  K  H  Q  G  N  *  *  F  F  Y  I  F  R  S  I  L  F  A  I  L  L  L  Y  N  I  L  L  M  K  L  N  Y  F  F  L  K  K  V  Q  N  E  E  T  *  S  *  S  N  R  N  G  S  R  *  F  *  G  K  S  *  R  D  Q  N  Y  *  Y  P  K  T  L  *  I  L  W  N  F  S  S  L  H  L  F  R  H  L  E  Y  E  R  S   : G  T  L  *  G  Y  S  K  I  S  W  *  R  Q  K  I  *  F  I  G  D  G  F  A  R  G  T  *  K  *  Y  L  Q  V  I  E  E  H  I  G  *  Y  S  Y  :  A  F  G  K  I  S  N  A  I  C  T  T  L  C  V  W  P  Q  E  F  R  A  I  Y  K  R :   S  K  S  G </second_frame>
            <third_frame>   F  F  Y  K  L  V  L  P  I  Q  E  H  *  *  Y  S  I  F  K  K  L  K  Q  H  F  F  L  L  N  G  G  I  M  C  K  A  F  *  S  I  K  V  I  N  N  F  S  I  Y  F  D  P  F  Y  L  L  Y  Y  Y  Y  I  I  F  F  *  *  N  *  I  I  F  F  *  R  K  Y  K  M  K  R  H  K  A  E  A  I  G  M  V  V  D  S  F  E  A  S  H  E  G  I  K  T  I  D  I  Q  K  R  C  E  F  S  G  T  S  H  L  C  I  Y  F  V  T  W  N  M  N  G  Q  :  V  P  C  E  D  I  A  K  L  V  G  E  D  R  K  Y  D  L  L  V  M  G  L  Q  E  A  P  R  N  N  I  C  K  L  L  K  N  T  L  A  D  T  H  M :   L  L  G  K  S  V  M  Q  S  V  Q  L  Y  V  F  G  P  K  N  S  E  Q  F  T  R   : E  V  K  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0223O22.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="30401" stop="30234"/>
                    <exon start="29848" stop="29718"/>
                    <exon start="28537" stop="28461"/>
                    <exon start="28332" stop="28322"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>387</number_coding_nucleotides>
                  <number_encoded_amino_acids>129</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RKYKMKRHKAEAIGMVVDSFEASHEGIKTIDIQKRCEFSGTSHLCIYFVTWNMNGQVPCEDIAKLVGEDRKYDLLVMGLQEAPRNNICKLLKNTLADTHMLLGKSVMQSVQLYVFGPKNSEQFTREVKV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="30608" e_stop="30498"/>
            <exon e_start="30399" e_stop="30234"/>
            <exon e_start="29848" e_stop="29718"/>
            <exon e_start="28537" e_stop="28461"/>
            <exon e_start="28332" e_stop="28207"/>
            <exon e_start="27236" e_stop="27049"/>
            <exon e_start="26957" e_stop="26820"/>
            <exon e_start="26722" e_stop="26461"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.968" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.943" acc_prob="0.039" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.926" e_score="0.974"/>
          <exon-intron don_prob="0.997" acc_prob="0.999" e_score="0.992"/>
          <exon-intron don_prob="0.996" acc_prob="0.994" e_score="0.995"/>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="30608" e_stop="30498" e_length="111"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.968">
            <gDNA_intron_boundary i_start="30497" i_stop="30400" i_length="98"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="30399" e_stop="30234" e_length="166"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.993">
            <gDNA_intron_boundary i_start="30233" i_stop="29849" i_length="385"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="29848" e_stop="29718" e_length="131"/>
          </exon>
          <intron i_serial="3" don_prob="0.943" acc_prob="0.039">
            <gDNA_intron_boundary i_start="29717" i_stop="28538" i_length="1180"/>
          </intron>
          <exon e_serial="4" e_score="0.974">
            <gDNA_exon_boundary e_start="28537" e_stop="28461" e_length="77"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.926">
            <gDNA_intron_boundary i_start="28460" i_stop="28333" i_length="128"/>
          </intron>
          <exon e_serial="5" e_score="0.992">
            <gDNA_exon_boundary e_start="28332" e_stop="28207" e_length="126"/>
          </exon>
          <intron i_serial="5" don_prob="0.997" acc_prob="0.999">
            <gDNA_intron_boundary i_start="28206" i_stop="27237" i_length="970"/>
          </intron>
          <exon e_serial="6" e_score="0.995">
            <gDNA_exon_boundary e_start="27236" e_stop="27049" e_length="188"/>
          </exon>
          <intron i_serial="6" don_prob="0.996" acc_prob="0.994">
            <gDNA_intron_boundary i_start="27048" i_stop="26958" i_length="91"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="26957" e_stop="26820" e_length="138"/>
          </exon>
          <intron i_serial="7" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="26819" i_stop="26723" i_length="97"/>
          </intron>
          <exon e_serial="8" e_score="0.996">
            <gDNA_exon_boundary e_start="26722" e_stop="26461" e_length="262"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30608" stop="30498"/>
              <exon start="30399" stop="30234"/>
              <exon start="29848" stop="29718"/>
              <exon start="28537" stop="28461"/>
              <exon start="28332" stop="28207"/>
              <exon start="27236" stop="27049"/>
              <exon start="26957" stop="26820"/>
              <exon start="26722" stop="26461"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U317690" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTTGTGCTTCCCATTCAAGAACACTAGTGATACTCAATATTCAAGAAATTAAAACAACATTTTTTTCTTCTCAATGGAGGGATTATGTGTAAAGCTTTTTGAAGCATCAAG : AAAGTACAAAATGAAGAGACATAAAGCTGAAGCAATAGGAATGGTAGTAGATAGTTTTGAGGCAAGTCATGAAGGGATCAAAACTATTGATATCCAAAAACGTTGTGAATTCTCTGGAACTTCTCATCTTTGCATCTATTTCGTCACTTGGAATATGAACGGTCAG : GTACCTTGTGAGGATATAGCAAAATTAGTTGGTGAAGACAGAAAATATGATTTATTGGTGATGGGTTTGCAAGAGGCACCTAGAAATAATATTTGCAAGTTATTGAAGAACACATTGGCTGATACTCATAT : GCTTTTGGGAAAATCAGTAATGCAATCTGTACAACTCTATGTGTTTGGCCCCAAGAATTCAGAGCAATTTACAAGAG : AAGTAAAAGTGGATAAGCATGAAGTTGGAGGATTAGGTTGGTTAATCAGAAGAAAAAAAGGAGCAGTGGCTATTAAAATTAGCTATAAAGGCATACAAATGGTTTTTATTTCTTGTCACCTCTCTG : CTCATGCTCGTAATGTAGAAGAGAGGAATTTGCAATTCAAACATATATCAAATTCACTTTTCTCAAAGAATAAGAATCCTTATGCTAAATCAGCACAACTTACTGTATGGTTAGGAGATTTAAATTATAGACTCCAAGGCATAAATTCTTATCCTGCTAGAGATCTCATCCATGAAAATCTCCACCAA : ATGTTAACTAGCAAAGATCAACTATTACAAGAAGCAGAAAGAGGAGAGATTTTTAATGGTTATTGTGAAGGTGCATTAGATTTTAAACCAACTTATAAATATGATATTGGAAGCAGCAGTTATGATACAAGTCACAAG : GTTAGAGTACCATCATGGACAGACAGAATATTATTCAAGATAGACAGTGACAATGTAAATGCAACTTTACATTCTTATGAAGCCATTGAAAGCATACAAAGCTCTGATCACAAGCCAGTCAAAGCTCATCTATGCTTAAAATTGAAAAAATAATTGATATTCATATTCCTCACAAATAATTTGTTCCAAAATTAAATGTTTTTATTAAGTACATTAATGATTAATTAATTAACCATGTGAAAATATTCTTTTATTGTTGTTC</gDNA_template>
            <first_frame> L  V  L  P  I  Q  E  H  *  *  Y  S  I  F  K  K  L  K  Q  H  F  F  L  L  N  G  G  I  M  C  K  A  F  *  S  I  K  :  K  V  Q  N  E  E  T  *  S  *  S  N  R  N  G  S  R  *  F  *  G  K  S  *  R  D  Q  N  Y  *  Y  P  K  T  L  *  I  L  W  N  F  S  S  L  H  L  F  R  H  L  E  Y  E  R  S   : G  T  L  *  G  Y  S  K  I  S  W  *  R  Q  K  I  *  F  I  G  D  G  F  A  R  G  T  *  K  *  Y  L  Q  V  I  E  E  H  I  G  *  Y  S  Y  :  A  F  G  K  I  S  N  A  I  C  T  T  L  C  V  W  P  Q  E  F  R  A  I  Y  K  R :   S  K  S  G  *  A  *  S  W  R  I  R  L  V  N  Q  K  K  K  R  S  S  G  Y  *  N  *  L  *  R  H  T  N  G  F  Y  F  L  S  P  L  C :   S  C  S  *  C  R  R  E  E  F  A  I  Q  T  Y  I  K  F  T  F  L  K  E  *  E  S  L  C  *  I  S  T  T  Y  C  M  V  R  R  F  K  L  *  T  P  R  H  K  F  L  S  C  *  R  S  H  P  *  K  S  P  P   : N  V  N  *  Q  R  S  T  I  T  R  S  R  K  R  R  D  F  *  W  L  L  *  R  C  I  R  F  *  T  N  L  *  I  *  Y  W  K  Q  Q  L  *  Y  K  S  Q   : G  *  S  T  I  M  D  R  Q  N  I  I  Q  D  R  Q  *  Q  C  K  C  N  F  T  F  L  *  S  H  *  K  H  T  K  L  *  S  Q  A  S  Q  S  S  S  M  L  K  I  E  K  I  I  D  I  H  I  P  H  K  *  F  V  P  K  L  N  V  F  I  K  Y  I  N  D  *  L  I  N  H  V  K  I  F  F  Y  C  C   </first_frame>
            <second_frame>  L  C  F  P  F  K  N  T  S  D  T  Q  Y  S  R  N  *  N  N  I  F  F  F  S  M  E  G  L  C  V  K  L  F  E  A  S  R :   K  Y  K  M  K  R  H  K  A  E  A  I  G  M  V  V  D  S  F  E  A  S  H  E  G  I  K  T  I  D  I  Q  K  R  C  E  F  S  G  T  S  H  L  C  I  Y  F  V  T  W  N  M  N  G  Q  :  V  P  C  E  D  I  A  K  L  V  G  E  D  R  K  Y  D  L  L  V  M  G  L  Q  E  A  P  R  N  N  I  C  K  L  L  K  N  T  L  A  D  T  H  M :   L  L  G  K  S  V  M  Q  S  V  Q  L  Y  V  F  G  P  K  N  S  E  Q  F  T  R   : E  V  K  V  D  K  H  E  V  G  G  L  G  W  L  I  R  R  K  K  G  A  V  A  I  K  I  S  Y  K  G  I  Q  M  V  F  I  S  C  H  L  S   : A  H  A  R  N  V  E  E  R  N  L  Q  F  K  H  I  S  N  S  L  F  S  K  N  K  N  P  Y  A  K  S  A  Q  L  T  V  W  L  G  D  L  N  Y  R  L  Q  G  I  N  S  Y  P  A  R  D  L  I  H  E  N  L  H  Q  :  M  L  T  S  K  D  Q  L  L  Q  E  A  E  R  G  E  I  F  N  G  Y  C  E  G  A  L  D  F  K  P  T  Y  K  Y  D  I  G  S  S  S  Y  D  T  S  H  K  :  V  R  V  P  S  W  T  D  R  I  L  F  K  I  D  S  D  N  V  N  A  T  L  H  S  Y  E  A  I  E  S  I  Q  S  S  D  H  K  P  V  K  A  H  L  C  L  K  L  K  K  *  L  I  F  I  F  L  T  N  N  L  F  Q  N  *  M  F  L  L  S  T  L  M  I  N  *  L  T  M  *  K  Y  S  F  I  V  V  </second_frame>
            <third_frame>   C  A  S  H  S  R  T  L  V  I  L  N  I  Q  E  I  K  T  T  F  F  S  S  Q  W  R  D  Y  V  *  S  F  L  K  H  Q   : E  S  T  K  *  R  D  I  K  L  K  Q  *  E  W  *  *  I  V  L  R  Q  V  M  K  G  S  K  L  L  I  S  K  N  V  V  N  S  L  E  L  L  I  F  A  S  I  S  S  L  G  I  *  T  V  R :   Y  L  V  R  I  *  Q  N  *  L  V  K  T  E  N  M  I  Y  W  *  W  V  C  K  R  H  L  E  I  I  F  A  S  Y  *  R  T  H  W  L  I  L  I   : C  F  W  E  N  Q  *  C  N  L  Y  N  S  M  C  L  A  P  R  I  Q  S  N  L  Q  E  :  K  *  K  W  I  S  M  K  L  E  D  *  V  G  *  S  E  E  K  K  E  Q  W  L  L  K  L  A  I  K  A  Y  K  W  F  L  F  L  V  T  S  L  :  L  M  L  V  M  *  K  R  G  I  C  N  S  N  I  Y  Q  I  H  F  S  Q  R  I  R  I  L  M  L  N  Q  H  N  L  L  Y  G  *  E  I  *  I  I  D  S  K  A  *  I  L  I  L  L  E  I  S  S  M  K  I  S  T  K :   C  *  L  A  K  I  N  Y  Y  K  K  Q  K  E  E  R  F  L  M  V  I  V  K  V  H  *  I  L  N  Q  L  I  N  M  I  L  E  A  A  V  M  I  Q  V  T  R :   L  E  Y  H  H  G  Q  T  E  Y  Y  S  R  *  T  V  T  M  *  M  Q  L  Y  I  L  M  K  P  L  K  A  Y  K  A  L  I  T  S  Q  S  K  L  I  Y  A  *  N  *  K  N  N  *  Y  S  Y  S  S  Q  I  I  C  S  K  I  K  C  F  Y  *  V  H  *  *  L  I  N  *  P  C  E  N  I  L  L  L  L  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0223O22.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="30556" stop="30498"/>
                    <exon start="30399" stop="30234"/>
                    <exon start="29848" stop="29718"/>
                    <exon start="28537" stop="28461"/>
                    <exon start="28332" stop="28207"/>
                    <exon start="27236" stop="27049"/>
                    <exon start="26957" stop="26820"/>
                    <exon start="26722" stop="26570"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1035</number_coding_nucleotides>
                  <number_encoded_amino_acids>345</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NNIFFFSMEGLCVKLFEASRKYKMKRHKAEAIGMVVDSFEASHEGIKTIDIQKRCEFSGTSHLCIYFVTWNMNGQVPCEDIAKLVGEDRKYDLLVMGLQEAPRNNICKLLKNTLADTHMLLGKSVMQSVQLYVFGPKNSEQFTREVKVDKHEVGGLGWLIRRKKGAVAIKISYKGIQMVFISCHLSAHARNVEERNLQFKHISNSLFSKNKNPYAKSAQLTVWLGDLNYRLQGINSYPARDLIHENLHQMLTSKDQLLQEAERGEIFNGYCEGALDFKPTYKYDIGSSSYDTSHKVRVPSWTDRILFKIDSDNVNATLHSYEAIESIQSSDHKPVKAHLCLKLKK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="34258" PGL_stop="37285"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="34258" e_stop="34351"/>
            <exon e_start="34656" e_stop="34755"/>
            <exon e_start="36578" e_stop="36660"/>
            <exon e_start="36745" e_stop="37285"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.932" e_score="1.000"/>
          <exon-intron don_prob="0.943" acc_prob="0.634" e_score="1.000"/>
          <exon-intron don_prob="0.269" acc_prob="0.998" e_score="0.988"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="34258" e_stop="34351" e_length="94"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.932">
            <gDNA_intron_boundary i_start="34352" i_stop="34655" i_length="304"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="34656" e_stop="34755" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.943" acc_prob="0.634">
            <gDNA_intron_boundary i_start="34756" i_stop="36577" i_length="1822"/>
          </intron>
          <exon e_serial="3" e_score="0.988">
            <gDNA_exon_boundary e_start="36578" e_stop="36660" e_length="83"/>
          </exon>
          <intron i_serial="3" don_prob="0.269" acc_prob="0.998">
            <gDNA_intron_boundary i_start="36661" i_stop="36744" i_length="84"/>
          </intron>
          <exon e_serial="4" e_score="0.991">
            <gDNA_exon_boundary e_start="36745" e_stop="37285" e_length="541"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34258" stop="34351"/>
              <exon start="34656" stop="34755"/>
              <exon start="36578" stop="36660"/>
              <exon start="36745" stop="37285"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U330703" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGGGGAGTACTATGCTATGTAGTAGTTCACACATCATTTGCTTCCATTTTTTCCGGCGTAACAGATTTACCAAATTCATCCGCCTGAAACAAAG : GATTAATGATGGTTAATTAGAGGGTTGTAGCTTCTGATGTATAACTTGTTTGTGATCCACGACCATTTGTTCTGCCATTGCTCTATGTGAAGTGATTTAG : ACCATACGAGTTTGTTGGTGAAGGAGTGAGCAGTTCTTACGGATAATATTGAAGAGCACAGTTGAATGATATGCAAAGCGGCG : GTGGAGCTGCAAAAATCTTCAAAAAGAGCTTTATTTGGACCTTTGAGGCATGACATTTTTTACAATCTCTTTACAAAAAAATGAGTGTAATGGTACGTCATGTGCTTCTTTCATAGTAACTGTGTAATGTGATAAAATGAACCATTTAATTTGCTTTCTTTCATTGTTCTCACTGATGTGTGCTTCTTTCGACATTTTCTGACGATAATTAGTCCCCTAGTTTTCAATTTATGTGCTACAGTGCTTGACAGAGTAAAGTACTGCATTTACCTTTTGAGTTAATTTACTATAATTTCTGGCCCAATTATAGTGGTCAACATCAACCACTCGGCCTCGATTGCATGATGACGTTGTGCAATGGGAAAAATAATTGCAATGGCTAAATGGTGATGTGAAAGATCAGCCATCCCTTAAATCTGTGTTTGTGATGAAATCCTCTCCCAGAAGAGTTCGAATGGCCATTCCCGCCCCTTGAGCATTACCAAGTAAATGACTACTTTAATCGTAGACATTGATCATAATTGGTTAAAAATTGGCCAGC</gDNA_template>
            <first_frame> R  G  V  L  C  Y  V  V  V  H  T  S  F  A  S  I  F  S  G  V  T  D  L  P  N  S  S  A  *  N  K   : G  L  M  M  V  N  *  R  V  V  A  S  D  V  *  L  V  C  D  P  R  P  F  V  L  P  L  L  Y  V  K  *  F  R :   P  Y  E  F  V  G  E  G  V  S  S  S  Y  G  *  Y  *  R  A  Q  L  N  D  M  Q  S  G   : G  G  A  A  K  I  F  K  K  S  F  I  W  T  F  E  A  *  H  F  L  Q  S  L  Y  K  K  M  S  V  M  V  R  H  V  L  L  S  *  *  L  C  N  V  I  K  *  T  I  *  F  A  F  F  H  C  S  H  *  C  V  L  L  S  T  F  S  D  D  N  *  S  P  S  F  Q  F  M  C  Y  S  A  *  Q  S  K  V  L  H  L  P  F  E  L  I  Y  Y  N  F  W  P  N  Y  S  G  Q  H  Q  P  L  G  L  D  C  M  M  T  L  C  N  G  K  N  N  C  N  G  *  M  V  M  *  K  I  S  H  P  L  N  L  C  L  *  *  N  P  L  P  E  E  F  E  W  P  F  P  P  L  E  H  Y  Q  V  N  D  Y  F  N  R  R  H  *  S  *  L  V  K  N  W  P   </first_frame>
            <second_frame>  G  E  Y  Y  A  M  *  *  F  T  H  H  L  L  P  F  F  P  A  *  Q  I  Y  Q  I  H  P  P  E  T  K  :  D  *  *  W  L  I  R  G  L  *  L  L  M  Y  N  L  F  V  I  H  D  H  L  F  C  H  C  S  M  *  S  D  L   : D  H  T  S  L  L  V  K  E  *  A  V  L  T  D  N  I  E  E  H  S  *  M  I  C  K  A  A  :  V  E  L  Q  K  S  S  K  R  A  L  F  G  P  L  R  H  D  I  F  Y  N  L  F  T  K  K  *  V  *  W  Y  V  M  C  F  F  H  S  N  C  V  M  *  *  N  E  P  F  N  L  L  S  F  I  V  L  T  D  V  C  F  F  R  H  F  L  T  I  I  S  P  L  V  F  N  L  C  A  T  V  L  D  R  V  K  Y  C  I  Y  L  L  S  *  F  T  I  I  S  G  P  I  I  V  V  N  I  N  H  S  A  S  I  A  *  *  R  C  A  M  G  K  I  I  A  M  A  K  W  *  C  E  R  S  A  I  P  *  I  C  V  C  D  E  I  L  S  Q  K  S  S  N  G  H  S  R  P  L  S  I  T  K  *  M  T  T  L  I  V  D  I  D  H  N  W  L  K  I  G  Q  </second_frame>
            <third_frame>   G  S  T  M  L  C  S  S  S  H  I  I  C  F  H  F  F  R  R  N  R  F  T  K  F  I  R  L  K  Q  R :   I  N  D  G  *  L  E  G  C  S  F  *  C  I  T  C  L  *  S  T  T  I  C  S  A  I  A  L  C  E  V  I  *  :  T  I  R  V  C  W  *  R  S  E  Q  F  L  R  I  I  L  K  S  T  V  E  *  Y  A  K  R  R :   W  S  C  K  N  L  Q  K  E  L  Y  L  D  L  *  G  M  T  F  F  T  I  S  L  Q  K  N  E  C  N  G  T  S  C  A  S  F  I  V  T  V  *  C  D  K  M  N  H  L  I  C  F  L  S  L  F  S  L  M  C  A  S  F  D  I  F  *  R  *  L  V  P  *  F  S  I  Y  V  L  Q  C  L  T  E  *  S  T  A  F  T  F  *  V  N  L  L  *  F  L  A  Q  L  *  W  S  T  S  T  T  R  P  R  L  H  D  D  V  V  Q  W  E  K  *  L  Q  W  L  N  G  D  V  K  D  Q  P  S  L  K  S  V  F  V  M  K  S  S  P  R  R  V  R  M  A  I  P  A  P  *  A  L  P  S  K  *  L  L  *  S  *  T  L  I  I  I  G  *  K  L  A  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C04HBa0223O22.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="40350" PGL_stop="42846"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="40350" e_stop="40708"/>
            <exon e_start="42060" e_stop="42348"/>
            <exon e_start="42449" e_stop="42486"/>
            <exon e_start="42618" e_stop="42846"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.998" e_score="0.983"/>
          <exon-intron don_prob="0.996" acc_prob="0.000" e_score="0.990"/>
          <exon-intron don_prob="0.990" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="0.952"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.983">
            <gDNA_exon_boundary e_start="40350" e_stop="40708" e_length="359"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.998">
            <gDNA_intron_boundary i_start="40709" i_stop="42059" i_length="1351"/>
          </intron>
          <exon e_serial="2" e_score="0.990">
            <gDNA_exon_boundary e_start="42060" e_stop="42348" e_length="289"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.000">
            <gDNA_intron_boundary i_start="42349" i_stop="42448" i_length="100"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="42449" e_stop="42486" e_length="38"/>
          </exon>
          <intron i_serial="3" don_prob="0.990" acc_prob="0.996">
            <gDNA_intron_boundary i_start="42487" i_stop="42617" i_length="131"/>
          </intron>
          <exon e_serial="4" e_score="0.952">
            <gDNA_exon_boundary e_start="42618" e_stop="42846" e_length="229"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40350" stop="40708"/>
              <exon start="42060" stop="42348"/>
              <exon start="42449" stop="42486"/>
              <exon start="42618" stop="42846"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U312731" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATAGAGAGTCGAAAATGGCGATTTCCGTGGCTTCTCTTGCTTCATCTTTTGCTTCCCTTTCATTTTCTTCTCAGATTTCTCAAAAACCCTATGCTGTATCCCTTGCTCATTCGAAGCAATTCTCTTTCTCTCTCGCTTCCAAAATCTCTACGCTTGTAGTGTCAGCTTCTGTTGCTGAAGCACCGGAGACGGAGGAATTGGAAACCAGAGAGAATCTTTTGAAGCTTGTGAAAAGTAGACTTCCTGGAGGTTTCGCTGCACAGCCTATTTTTGGAACTGGTAGACGTAAAAGTGCTAGTGCTCGTGTTGTTCTTCAGGAAGGTTCTGGAAAAATCATCATCAACTATCGTGATGCTAAG : GAATATCTTCAAGGAAATCCATTATGGATTCAATATGTCAAAACTCCACTGGCCACTTTAGGATATGAGGCTAGTTATGACATTTTTGTCAAGGTGGAAGGCGGTGGTCTTTCTGGGCAGGCTCAAGCAATTTCCCTTGGCATTGCTCGTGCACTCCTAAAGGTTAGCGAGAGCCATAGAAAACCATTGAGGGAGGAGGGTCTGTTAACTAGAGATGCCAGAGTTGTTGAGCGGAAGAAAGTTGGTCTCAAGAAGGCTCGCAAGCGTCCACAATTTTCCAAGCGTTGAG : GTTGGTACTTACTCACTGTGGCAGCATTTGGTAGAAAG : ATTTGGTGGTTTATTGACCCAGATTGGGAAAAAAGAGCATATCAATGATCTGTTTTGACTGTTGAAGATGAGAAAATGTTTCTGAATTATCATCCTCAATTGCTTCTTTGTAAAAATTTTGTATTAGTCCCTACTCAGAATTACAATTTGTTCTGTTGATGGTATTTTTTGAGTTTAGTTTCTTGTTCAATGTTTAATATAATTCTGGAGATTTTTGTGCCTAAAAAAA</gDNA_template>
            <first_frame> I  E  S  R  K  W  R  F  P  W  L  L  L  L  H  L  L  L  P  F  H  F  L  L  R  F  L  K  N  P  M  L  Y  P  L  L  I  R  S  N  S  L  S  L  S  L  P  K  S  L  R  L  *  C  Q  L  L  L  L  K  H  R  R  R  R  N  W  K  P  E  R  I  F  *  S  L  *  K  V  D  F  L  E  V  S  L  H  S  L  F  L  E  L  V  D  V  K  V  L  V  L  V  L  F  F  R  K  V  L  E  K  S  S  S  T  I  V  M  L  R :   N  I  F  K  E  I  H  Y  G  F  N  M  S  K  L  H  W  P  L  *  D  M  R  L  V  M  T  F  L  S  R  W  K  A  V  V  F  L  G  R  L  K  Q  F  P  L  A  L  L  V  H  S  *  R  L  A  R  A  I  E  N  H  *  G  R  R  V  C  *  L  E  M  P  E  L  L  S  G  R  K  L  V  S  R  R  L  A  S  V  H  N  F  P  S  V  E  :  V  G  T  Y  S  L  W  Q  H  L  V  E  R :   F  G  G  L  L  T  Q  I  G  K  K  E  H  I  N  D  L  F  *  L  L  K  M  R  K  C  F  *  I  I  I  L  N  C  F  F  V  K  I  L  Y  *  S  L  L  R  I  T  I  C  S  V  D  G  I  F  *  V  *  F  L  V  Q  C  L  I  *  F  W  R  F  L  C  L  K  K </first_frame>
            <second_frame>  *  R  V  E  N  G  D  F  R  G  F  S  C  F  I  F  C  F  P  F  I  F  F  S  D  F  S  K  T  L  C  C  I  P  C  S  F  E  A  I  L  F  L  S  R  F  Q  N  L  Y  A  C  S  V  S  F  C  C  *  S  T  G  D  G  G  I  G  N  Q  R  E  S  F  E  A  C  E  K  *  T  S  W  R  F  R  C  T  A  Y  F  W  N  W  *  T  *  K  C  *  C  S  C  C  S  S  G  R  F  W  K  N  H  H  Q  L  S  *  C  *   : G  I  S  S  R  K  S  I  M  D  S  I  C  Q  N  S  T  G  H  F  R  I  *  G  *  L  *  H  F  C  Q  G  G  R  R  W  S  F  W  A  G  S  S  N  F  P  W  H  C  S  C  T  P  K  G  *  R  E  P  *  K  T  I  E  G  G  G  S  V  N  *  R  C  Q  S  C  *  A  E  E  S  W  S  Q  E  G  S  Q  A  S  T  I  F  Q  A  L  R :   L  V  L  T  H  C  G  S  I  W  *  K   : D  L  V  V  Y  *  P  R  L  G  K  K  S  I  S  M  I  C  F  D  C  *  R  *  E  N  V  S  E  L  S  S  S  I  A  S  L  *  K  F  C  I  S  P  Y  S  E  L  Q  F  V  L  L  M  V  F  F  E  F  S  F  L  F  N  V  *  Y  N  S  G  D  F  C  A  *  K   </second_frame>
            <third_frame>   R  E  S  K  M  A  I  S  V  A  S  L  A  S  S  F  A  S  L  S  F  S  S  Q  I  S  Q  K  P  Y  A  V  S  L  A  H  S  K  Q  F  S  F  S  L  A  S  K  I  S  T  L  V  V  S  A  S  V  A  E  A  P  E  T  E  E  L  E  T  R  E  N  L  L  K  L  V  K  S  R  L  P  G  G  F  A  A  Q  P  I  F  G  T  G  R  R  K  S  A  S  A  R  V  V  L  Q  E  G  S  G  K  I  I  I  N  Y  R  D  A  K  :  E  Y  L  Q  G  N  P  L  W  I  Q  Y  V  K  T  P  L  A  T  L  G  Y  E  A  S  Y  D  I  F  V  K  V  E  G  G  G  L  S  G  Q  A  Q  A  I  S  L  G  I  A  R  A  L  L  K  V  S  E  S  H  R  K  P  L  R  E  E  G  L  L  T  R  D  A  R  V  V  E  R  K  K  V  G  L  K  K  A  R  K  R  P  Q  F  S  K  R  *   : G  W  Y  L  L  T  V  A  A  F  G  R  K  :  I  W  W  F  I  D  P  D  W  E  K  R  A  Y  Q  *  S  V  L  T  V  E  D  E  K  M  F  L  N  Y  H  P  Q  L  L  L  C  K  N  F  V  L  V  P  T  Q  N  Y  N  L  F  C  *  W  Y  F  L  S  L  V  S  C  S  M  F  N  I  I  L  E  I  F  V  P  K  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0223O22.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="40352" stop="40708"/>
                    <exon start="42060" stop="42347"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>642</number_coding_nucleotides>
                  <number_encoded_amino_acids>214</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RESKMAISVASLASSFASLSFSSQISQKPYAVSLAHSKQFSFSLASKISTLVVSASVAEAPETEELETRENLLKLVKSRLPGGFAAQPIFGTGRRKSASARVVLQEGSGKIIINYRDAKEYLQGNPLWIQYVKTPLATLGYEASYDIFVKVEGGGLSGQAQAISLGIARALLKVSESHRKPLREEGLLTRDARVVERKKVGLKKARKRPQFSKR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="45043" PGL_stop="46163"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="45043" e_stop="45208"/>
            <exon e_start="45294" e_stop="45842"/>
            <exon e_start="45919" e_stop="46163"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.663" acc_prob="0.941" e_score="0.988"/>
          <exon-intron don_prob="0.921" acc_prob="0.995" e_score="0.996"/>
          <exon-only e_score="0.967"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="45043" e_stop="45208" e_length="166"/>
          </exon>
          <intron i_serial="1" don_prob="0.663" acc_prob="0.941">
            <gDNA_intron_boundary i_start="45209" i_stop="45293" i_length="85"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="45294" e_stop="45842" e_length="549"/>
          </exon>
          <intron i_serial="2" don_prob="0.921" acc_prob="0.995">
            <gDNA_intron_boundary i_start="45843" i_stop="45918" i_length="76"/>
          </intron>
          <exon e_serial="3" e_score="0.967">
            <gDNA_exon_boundary e_start="45919" e_stop="46163" e_length="245"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45043" stop="45208"/>
              <exon start="45294" stop="45842"/>
              <exon start="45919" stop="46163"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U328793" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTGTTCGTGTGTTATGTGGGACCTTTGGCTTAAGAAGTGCGACGATGAAGCTCCCACTGTCAATTGGTTATCAGAGAAAACTAAGCATTGTCCAAAATGTCATAAAATTGTGGAGAAGGATGGAGGATGCAACCTGGTACAGTGTATATGTGGACAGCCATTTTG : TTGGCTCTGTGGTGAAGCTACTGGATTTGAACACACATGGAATAGTATAGCAGGTCACACTTGTGGCAGATACAAAGAAAATCATTTGAAAAGTGAGGAGGATTCTGTAGAGGACTATTGGCGTCTTACTCACTATTATAGTCGTTATAAGGCTCATATTGGTTCGTTGAAGATTGAAGCATCTGAATCGAAGCAAAAAATACTTGATAAAGTCCATAGCCTTGAATCAAAGGAGTTCCAGTTAAAAGATTTCAGCTGGGCAATGAGTGGATTTTATAGACTCGCCTTATCAAGGCGAGTTCTCGCCTGTTCCTATCCATTTGCATACTACTATTTTGGAGCTCTGTTTGCAAATGAAATAACAAAAGAAGAACGCGAAATAAAACAGAACCTCTTTGAGGATCAACAGCAGCAACTTGAAACAAATATCGAAAGGCTTTCAATGTTCTTGGAAGAGCCATTTGGTAGCTATGCTGAAGATAAGCTTGTTGAGACAAGAATGAAGATTATTACTCTCTCCACAGTAACTGATGACCTCTGCAAAAACTT : GTACGAGTGCATTGACAACGATTTGCTAGTTCCTTTACAACAAGCAACTCATACAATAGTTCGTTATAGATCCAATGGTGTGGAAAAAGCATCAGAACTATAGGTAGGTACAGATATACTATGTAATGCTTCTTTACTATTGAGCGCGACTGCAGGTTGCATTGAACGTTGATCATTTGGATCGCGTTGTTCTGGCTTGATGCTTCTTCCAACTTGTTGTTTAAACACTATCAATCAATTCAATT</gDNA_template>
            <first_frame> L  V  R  V  L  C  G  T  F  G  L  R  S  A  T  M  K  L  P  L  S  I  G  Y  Q  R  K  L  S  I  V  Q  N  V  I  K  L  W  R  R  M  E  D  A  T  W  Y  S  V  Y  V  D  S  H  F   : V  G  S  V  V  K  L  L  D  L  N  T  H  G  I  V  *  Q  V  T  L  V  A  D  T  K  K  I  I  *  K  V  R  R  I  L  *  R  T  I  G  V  L  L  T  I  I  V  V  I  R  L  I  L  V  R  *  R  L  K  H  L  N  R  S  K  K  Y  L  I  K  S  I  A  L  N  Q  R  S  S  S  *  K  I  S  A  G  Q  *  V  D  F  I  D  S  P  Y  Q  G  E  F  S  P  V  P  I  H  L  H  T  T  I  L  E  L  C  L  Q  M  K  *  Q  K  K  N  A  K  *  N  R  T  S  L  R  I  N  S  S  N  L  K  Q  I  S  K  G  F  Q  C  S  W  K  S  H  L  V  A  M  L  K  I  S  L  L  R  Q  E  *  R  L  L  L  S  P  Q  *  L  M  T  S  A  K  T   : C  T  S  A  L  T  T  I  C  *  F  L  Y  N  K  Q  L  I  Q  *  F  V  I  D  P  M  V  W  K  K  H  Q  N  Y  R  *  V  Q  I  Y  Y  V  M  L  L  Y  Y  *  A  R  L  Q  V  A  L  N  V  D  H  L  D  R  V  V  L  A  *  C  F  F  Q  L  V  V  *  T  L  S  I  N  S  I </first_frame>
            <second_frame>  L  F  V  C  Y  V  G  P  L  A  *  E  V  R  R  *  S  S  H  C  Q  L  V  I  R  E  N  *  A  L  S  K  M  S  *  N  C  G  E  G  W  R  M  Q  P  G  T  V  Y  M  W  T  A  I  L  :  L  A  L  W  *  S  Y  W  I  *  T  H  M  E  *  Y  S  R  S  H  L  W  Q  I  Q  R  K  S  F  E  K  *  G  G  F  C  R  G  L  L  A  S  Y  S  L  L  *  S  L  *  G  S  Y  W  F  V  E  D  *  S  I  *  I  E  A  K  N  T  *  *  S  P  *  P  *  I  K  G  V  P  V  K  R  F  Q  L  G  N  E  W  I  L  *  T  R  L  I  K  A  S  S  R  L  F  L  S  I  C  I  L  L  F  W  S  S  V  C  K  *  N  N  K  R  R  T  R  N  K  T  E  P  L  *  G  S  T  A  A  T  *  N  K  Y  R  K  A  F  N  V  L  G  R  A  I  W  *  L  C  *  R  *  A  C  *  D  K  N  E  D  Y  Y  S  L  H  S  N  *  *  P  L  Q  K  L  :  V  R  V  H  *  Q  R  F  A  S  S  F  T  T  S  N  S  Y  N  S  S  L  *  I  Q  W  C  G  K  S  I  R  T  I  G  R  Y  R  Y  T  M  *  C  F  F  T  I  E  R  D  C  R  L  H  *  T  L  I  I  W  I  A  L  F  W  L  D  A  S  S  N  L  L  F  K  H  Y  Q  S  I  Q   </second_frame>
            <third_frame>   C  S  C  V  M  W  D  L  W  L  K  K  C  D  D  E  A  P  T  V  N  W  L  S  E  K  T  K  H  C  P  K  C  H  K  I  V  E  K  D  G  G  C  N  L  V  Q  C  I  C  G  Q  P  F  C :   W  L  C  G  E  A  T  G  F  E  H  T  W  N  S  I  A  G  H  T  C  G  R  Y  K  E  N  H  L  K  S  E  E  D  S  V  E  D  Y  W  R  L  T  H  Y  Y  S  R  Y  K  A  H  I  G  S  L  K  I  E  A  S  E  S  K  Q  K  I  L  D  K  V  H  S  L  E  S  K  E  F  Q  L  K  D  F  S  W  A  M  S  G  F  Y  R  L  A  L  S  R  R  V  L  A  C  S  Y  P  F  A  Y  Y  Y  F  G  A  L  F  A  N  E  I  T  K  E  E  R  E  I  K  Q  N  L  F  E  D  Q  Q  Q  Q  L  E  T  N  I  E  R  L  S  M  F  L  E  E  P  F  G  S  Y  A  E  D  K  L  V  E  T  R  M  K  I  I  T  L  S  T  V  T  D  D  L  C  K  N  L :   Y  E  C  I  D  N  D  L  L  V  P  L  Q  Q  A  T  H  T  I  V  R  Y  R  S  N  G  V  E  K  A  S  E  L  *  V  G  T  D  I  L  C  N  A  S  L  L  L  S  A  T  A  G  C  I  E  R  *  S  F  G  S  R  C  S  G  L  M  L  L  P  T  C  C  L  N  T  I  N  Q  F  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0223O22.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="45045" stop="45208"/>
                    <exon start="45294" stop="45842"/>
                    <exon start="45919" stop="46021"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>813</number_coding_nucleotides>
                  <number_encoded_amino_acids>271</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CSCVMWDLWLKKCDDEAPTVNWLSEKTKHCPKCHKIVEKDGGCNLVQCICGQPFCWLCGEATGFEHTWNSIAGHTCGRYKENHLKSEEDSVEDYWRLTHYYSRYKAHIGSLKIEASESKQKILDKVHSLESKEFQLKDFSWAMSGFYRLALSRRVLACSYPFAYYYFGALFANEITKEEREIKQNLFEDQQQQLETNIERLSMFLEEPFGSYAEDKLVETRMKIITLSTVTDDLCKNLYECIDNDLLVPLQQATHTIVRYRSNGVEKASEL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="47529" PGL_stop="51660"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="47529" e_stop="47962"/>
            <exon e_start="49313" e_stop="49527"/>
            <exon e_start="49636" e_stop="49815"/>
            <exon e_start="49971" e_stop="50126"/>
            <exon e_start="50468" e_stop="50744"/>
            <exon e_start="50896" e_stop="51660"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.983" acc_prob="0.982" e_score="0.993"/>
          <exon-intron don_prob="0.070" acc_prob="0.957" e_score="0.981"/>
          <exon-intron don_prob="0.911" acc_prob="0.992" e_score="0.994"/>
          <exon-intron don_prob="0.998" acc_prob="0.834" e_score="1.000"/>
          <exon-intron don_prob="0.757" acc_prob="0.833" e_score="0.989"/>
          <exon-only e_score="0.966"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="47529" e_stop="47962" e_length="434"/>
          </exon>
          <intron i_serial="1" don_prob="0.983" acc_prob="0.982">
            <gDNA_intron_boundary i_start="47963" i_stop="49312" i_length="1350"/>
          </intron>
          <exon e_serial="2" e_score="0.981">
            <gDNA_exon_boundary e_start="49313" e_stop="49527" e_length="215"/>
          </exon>
          <intron i_serial="2" don_prob="0.070" acc_prob="0.957">
            <gDNA_intron_boundary i_start="49528" i_stop="49635" i_length="108"/>
          </intron>
          <exon e_serial="3" e_score="0.994">
            <gDNA_exon_boundary e_start="49636" e_stop="49815" e_length="180"/>
          </exon>
          <intron i_serial="3" don_prob="0.911" acc_prob="0.992">
            <gDNA_intron_boundary i_start="49816" i_stop="49970" i_length="155"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="49971" e_stop="50126" e_length="156"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.834">
            <gDNA_intron_boundary i_start="50127" i_stop="50467" i_length="341"/>
          </intron>
          <exon e_serial="5" e_score="0.989">
            <gDNA_exon_boundary e_start="50468" e_stop="50744" e_length="277"/>
          </exon>
          <intron i_serial="5" don_prob="0.757" acc_prob="0.833">
            <gDNA_intron_boundary i_start="50745" i_stop="50895" i_length="151"/>
          </intron>
          <exon e_serial="6" e_score="0.966">
            <gDNA_exon_boundary e_start="50896" e_stop="51660" e_length="765"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47529" stop="47962"/>
              <exon start="49313" stop="49527"/>
              <exon start="49636" stop="49815"/>
              <exon start="49971" stop="50126"/>
              <exon start="50468" stop="50744"/>
              <exon start="50896" stop="51660"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U325051" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGCTACTGACGACGTCGTCTCGACTGCACTGCTTAATCTCCGTCTAGTCGCCGCCGTTCAATGTCGTCATCGTCGTCGATGTTAAACAACAGTGTCTCCATTACTGTCTCCGACGACGAGCCCGACGAATTTGCAAACAAGCTTAGGGCACGAGCTCGTAGGAAGAGAAAGAAATATGCCCTCCGAGGCAAAACTGGTTTCTCTCATATTGTCCTGAAAAAGCTCCTTAGGTGGTGGCCTTTTCTGCTATTCTTACTTGCAGCAGGTCTTCTTATCTTTGAAGCCTCTCGAATTGGAAGAAGACCTAGTTCGGTTGTTAAAAATTCGAATCCAGTGACTGGAAATAAAACTGATAAGGTTGTTGAGAAGAAACCGCCGACGAACTTGAATCGCCTTGATCTAGTGACTCATGTCGTGCATGGAGTTAGAGAAC : CTTGCTTGAAGTTACTACCAGCTGAAGGACTTGAGCATCTTGATTTCCCCATGGATAAAGTACCTGCCGATCCTATTAAACAGGTGGTATACATCACAGAGGCCAATCCTGCTTCTCTAGATGATGGAATGCCATTTGAGCAACACTCGGGGGCGTCAAGATTTAATTTATTCACAGGAAACCAAACTCTCAAGCAAAGGGATGAAAGTTTTAAG : GTGAAAGGAGCGGGTGCATCCATCCACTGTGGTTTTTACAGTGATAAAGGAGGCTTTAGGATTTCTGTTGAAGATAGAAGTTATATGGAATCCTGCAAAGCTGTGGTGTCAACTTGTGCATTTGGTGGTGGAGATGATCTCTATCAACCTATAGGAATGTCAGAGTCATCTCTCAAGAAG : GTTTGCTTTGTGGCTTTTTGGGATGAAATTACACTTGCATCACAAGAGGCAGATGGTCATAAAGTTGGTGATGACCGTTACATCGGAAAGTGGCGCATCATCCTGGTTAAGAATCTACCATTCACAGACCAAAGGTTGAATGGTAAAATCCCAAAG : ATGCTGGCCCATCGTCTCTTTCCAAATTCTAGATATTCCATTTGGGTAGACTCAAAGTCCCAACTTAGGAGGGATCCATTGGGTGTGTTGGAGGCTCTGCTTTGGCGTTCAAACTCTGTACTAGCAATCTCGGAACATGGAGCTCGGAGTAGTGTGTATGATGAGGCAAAGGCTGTTGTCAAGAAAAATAAAGCCACTCCAGAGGAAGTGGCCGTGCAGATAGCTCAGTACCGTCAAGATGGACTCCCCGAGGATAAGAGATTCAATGGGAAAAAAG : CTCTATCTGAGGCTTCAATTATTGTGAGAGAGCACACCCCATCAACTAATCTGCTCATGTGCTTATGGTTCAATGAGGTGGTTCGCTTTACATCCCGTGATCAACTGAGTTTTCCATATGTCCTTTGGCGGTTTAAAGAGTTCAAGAATATCAACATGTTTCCTGTTTGTACACGCAAGGATCTCGTCAATAGCATGGGTCACATAAGAAAAGCAAAGCCTCTAACAGGTTGATGTATATTCTTGGTTTGCACGAGAATGGATAGCCGAAACAACAACACCCAGTCTTTCTCCAAGTTTCAAGCATATTTGCTTCCTCTGTGATATGTGCTAATGACATTCAATAGAGAGATCAGATAGGATTAGCATATTCCTATTTGTTCTTCAGAATTCAAAGGGCACTGTTTTTTCGAAGCCCTGGTGGGAATGGGATAGAGAGAGCCCGAAAAGGTTTCATCGTACGAAAGAAGAAAAATGCAGTGATGGTATGTTGTGCATTTGAACAAACTAGCCTTCTTTAGGAGGGTCTTTTTTTTAACCTATTTATAATTCTTTTGTTGACCTACGTACACTGTTAAAATTGTGGTGAGTTTTATCAAATGTGAAGCACCAAATTTTTAGCTCTCTTGAATTAGTGCAAGATTTGCTGTAAACTATCATGTAAAGTATTTGATTGGATATTTAGTTACTCAATTGTATGTGAAAACTTAGCACTATGTTGTGTCTAGAGTGAGTAACATTTCTATACAAACTACCCCTTTGTGTA</gDNA_template>
            <first_frame> K  L  L  T  T  S  S  R  L  H  C  L  I  S  V  *  S  P  P  F  N  V  V  I  V  V  D  V  K  Q  Q  C  L  H  Y  C  L  R  R  R  A  R  R  I  C  K  Q  A  *  G  T  S  S  *  E  E  K  E  I  C  P  P  R  Q  N  W  F  L  S  Y  C  P  E  K  A  P  *  V  V  A  F  S  A  I  L  T  C  S  R  S  S  Y  L  *  S  L  S  N  W  K  K  T  *  F  G  C  *  K  F  E  S  S  D  W  K  *  N  *  *  G  C  *  E  E  T  A  D  E  L  E  S  P  *  S  S  D  S  C  R  A  W  S  *  R  T :   L  L  E  V  T  T  S  *  R  T  *  A  S  *  F  P  H  G  *  S  T  C  R  S  Y  *  T  G  G  I  H  H  R  G  Q  S  C  F  S  R  *  W  N  A  I  *  A  T  L  G  G  V  K  I  *  F  I  H  R  K  P  N  S  Q  A  K  G  *  K  F  *   : G  E  R  S  G  C  I  H  P  L  W  F  L  Q  *  *  R  R  L  *  D  F  C  *  R  *  K  L  Y  G  I  L  Q  S  C  G  V  N  L  C  I  W  W  W  R  *  S  L  S  T  Y  R  N  V  R  V  I  S  Q  E   : G  L  L  C  G  F  L  G  *  N  Y  T  C  I  T  R  G  R  W  S  *  S  W  *  *  P  L  H  R  K  V  A  H  H  P  G  *  E  S  T  I  H  R  P  K  V  E  W  *  N  P  K   : D  A  G  P  S  S  L  S  K  F  *  I  F  H  L  G  R  L  K  V  P  T  *  E  G  S  I  G  C  V  G  G  S  A  L  A  F  K  L  C  T  S  N  L  G  T  W  S  S  E  *  C  V  *  *  G  K  G  C  C  Q  E  K  *  S  H  S  R  G  S  G  R  A  D  S  S  V  P  S  R  W  T  P  R  G  *  E  I  Q  W  E  K  S :   S  I  *  G  F  N  Y  C  E  R  A  H  P  I  N  *  S  A  H  V  L  M  V  Q  *  G  G  S  L  Y  I  P  *  S  T  E  F  S  I  C  P  L  A  V  *  R  V  Q  E  Y  Q  H  V  S  C  L  Y  T  Q  G  S  R  Q  *  H  G  S  H  K  K  S  K  A  S  N  R  L  M  Y  I  L  G  L  H  E  N  G  *  P  K  Q  Q  H  P  V  F  L  Q  V  S  S  I  F  A  S  S  V  I  C  A  N  D  I  Q  *  R  D  Q  I  G  L  A  Y  S  Y  L  F  F  R  I  Q  R  A  L  F  F  R  S  P  G  G  N  G  I  E  R  A  R  K  G  F  I  V  R  K  K  K  N  A  V  M  V  C  C  A  F  E  Q  T  S  L  L  *  E  G  L  F  F  N  L  F  I  I  L  L  L  T  Y  V  H  C  *  N  C  G  E  F  Y  Q  M  *  S  T  K  F  L  A  L  L  N  *  C  K  I  C  C  K  L  S  C  K  V  F  D  W  I  F  S  Y  S  I  V  C  E  N  L  A  L  C  C  V  *  S  E  *  H  F  Y  T  N  Y  P  F  V   </first_frame>
            <second_frame>  S  Y  *  R  R  R  L  D  C  T  A  *  S  P  S  S  R  R  R  S  M  S  S  S  S  S  M  L  N  N  S  V  S  I  T  V  S  D  D  E  P  D  E  F  A  N  K  L  R  A  R  A  R  R  K  R  K  K  Y  A  L  R  G  K  T  G  F  S  H  I  V  L  K  K  L  L  R  W  W  P  F  L  L  F  L  L  A  A  G  L  L  I  F  E  A  S  R  I  G  R  R  P  S  S  V  V  K  N  S  N  P  V  T  G  N  K  T  D  K  V  V  E  K  K  P  P  T  N  L  N  R  L  D  L  V  T  H  V  V  H  G  V  R  E   : P  C  L  K  L  L  P  A  E  G  L  E  H  L  D  F  P  M  D  K  V  P  A  D  P  I  K  Q  V  V  Y  I  T  E  A  N  P  A  S  L  D  D  G  M  P  F  E  Q  H  S  G  A  S  R  F  N  L  F  T  G  N  Q  T  L  K  Q  R  D  E  S  F  K  :  V  K  G  A  G  A  S  I  H  C  G  F  Y  S  D  K  G  G  F  R  I  S  V  E  D  R  S  Y  M  E  S  C  K  A  V  V  S  T  C  A  F  G  G  G  D  D  L  Y  Q  P  I  G  M  S  E  S  S  L  K  K  :  V  C  F  V  A  F  W  D  E  I  T  L  A  S  Q  E  A  D  G  H  K  V  G  D  D  R  Y  I  G  K  W  R  I  I  L  V  K  N  L  P  F  T  D  Q  R  L  N  G  K  I  P  K  :  M  L  A  H  R  L  F  P  N  S  R  Y  S  I  W  V  D  S  K  S  Q  L  R  R  D  P  L  G  V  L  E  A  L  L  W  R  S  N  S  V  L  A  I  S  E  H  G  A  R  S  S  V  Y  D  E  A  K  A  V  V  K  K  N  K  A  T  P  E  E  V  A  V  Q  I  A  Q  Y  R  Q  D  G  L  P  E  D  K  R  F  N  G  K  K   : A  L  S  E  A  S  I  I  V  R  E  H  T  P  S  T  N  L  L  M  C  L  W  F  N  E  V  V  R  F  T  S  R  D  Q  L  S  F  P  Y  V  L  W  R  F  K  E  F  K  N  I  N  M  F  P  V  C  T  R  K  D  L  V  N  S  M  G  H  I  R  K  A  K  P  L  T  G  *  C  I  F  L  V  C  T  R  M  D  S  R  N  N  N  T  Q  S  F  S  K  F  Q  A  Y  L  L  P  L  *  Y  V  L  M  T  F  N  R  E  I  R  *  D  *  H  I  P  I  C  S  S  E  F  K  G  H  C  F  F  E  A  L  V  G  M  G  *  R  E  P  E  K  V  S  S  Y  E  R  R  K  M  Q  *  W  Y  V  V  H  L  N  K  L  A  F  F  R  R  V  F  F  L  T  Y  L  *  F  F  C  *  P  T  Y  T  V  K  I  V  V  S  F  I  K  C  E  A  P  N  F  *  L  S  *  I  S  A  R  F  A  V  N  Y  H  V  K  Y  L  I  G  Y  L  V  T  Q  L  Y  V  K  T  *  H  Y  V  V  S  R  V  S  N  I  S  I  Q  T  T  P  L  C  </second_frame>
            <third_frame>   A  T  D  D  V  V  S  T  A  L  L  N  L  R  L  V  A  A  V  Q  C  R  H  R  R  R  C  *  T  T  V  S  P  L  L  S  P  T  T  S  P  T  N  L  Q  T  S  L  G  H  E  L  V  G  R  E  R  N  M  P  S  E  A  K  L  V  S  L  I  L  S  *  K  S  S  L  G  G  G  L  F  C  Y  S  Y  L  Q  Q  V  F  L  S  L  K  P  L  E  L  E  E  D  L  V  R  L  L  K  I  R  I  Q  *  L  E  I  K  L  I  R  L  L  R  R  N  R  R  R  T  *  I  A  L  I  *  *  L  M  S  C  M  E  L  E  N  :  L  A  *  S  Y  Y  Q  L  K  D  L  S  I  L  I  S  P  W  I  K  Y  L  P  I  L  L  N  R  W  Y  T  S  Q  R  P  I  L  L  L  *  M  M  E  C  H  L  S  N  T  R  G  R  Q  D  L  I  Y  S  Q  E  T  K  L  S  S  K  G  M  K  V  L  R :   *  K  E  R  V  H  P  S  T  V  V  F  T  V  I  K  E  A  L  G  F  L  L  K  I  E  V  I  W  N  P  A  K  L  W  C  Q  L  V  H  L  V  V  E  M  I  S  I  N  L  *  E  C  Q  S  H  L  S  R  R :   F  A  L  W  L  F  G  M  K  L  H  L  H  H  K  R  Q  M  V  I  K  L  V  M  T  V  T  S  E  S  G  A  S  S  W  L  R  I  Y  H  S  Q  T  K  G  *  M  V  K  S  Q  R :   C  W  P  I  V  S  F  Q  I  L  D  I  P  F  G  *  T  Q  S  P  N  L  G  G  I  H  W  V  C  W  R  L  C  F  G  V  Q  T  L  Y  *  Q  S  R  N  M  E  L  G  V  V  C  M  M  R  Q  R  L  L  S  R  K  I  K  P  L  Q  R  K  W  P  C  R  *  L  S  T  V  K  M  D  S  P  R  I  R  D  S  M  G  K  K  :  L  Y  L  R  L  Q  L  L  *  E  S  T  P  H  Q  L  I  C  S  C  A  Y  G  S  M  R  W  F  A  L  H  P  V  I  N  *  V  F  H  M  S  F  G  G  L  K  S  S  R  I  S  T  C  F  L  F  V  H  A  R  I  S  S  I  A  W  V  T  *  E  K  Q  S  L  *  Q  V  D  V  Y  S  W  F  A  R  E  W  I  A  E  T  T  T  P  S  L  S  P  S  F  K  H  I  C  F  L  C  D  M  C  *  *  H  S  I  E  R  S  D  R  I  S  I  F  L  F  V  L  Q  N  S  K  G  T  V  F  S  K  P  W  W  E  W  D  R  E  S  P  K  R  F  H  R  T  K  E  E  K  C  S  D  G  M  L  C  I  *  T  N  *  P  S  L  G  G  S  F  F  *  P  I  Y  N  S  F  V  D  L  R  T  L  L  K  L  W  *  V  L  S  N  V  K  H  Q  I  F  S  S  L  E  L  V  Q  D  L  L  *  T  I  M  *  S  I  *  L  D  I  *  L  L  N  C  M  *  K  L  S  T  M  L  C  L  E  *  V  T  F  L  Y  K  L  P  L  C  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0223O22.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="47566" stop="47962"/>
                    <exon start="49313" stop="49527"/>
                    <exon start="49636" stop="49815"/>
                    <exon start="49971" stop="50126"/>
                    <exon start="50468" stop="50744"/>
                    <exon start="50896" stop="51128"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1455</number_coding_nucleotides>
                  <number_encoded_amino_acids>485</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SPSSRRRSMSSSSSMLNNSVSITVSDDEPDEFANKLRARARRKRKKYALRGKTGFSHIVLKKLLRWWPFLLFLLAAGLLIFEASRIGRRPSSVVKNSNPVTGNKTDKVVEKKPPTNLNRLDLVTHVVHGVREPCLKLLPAEGLEHLDFPMDKVPADPIKQVVYITEANPASLDDGMPFEQHSGASRFNLFTGNQTLKQRDESFKVKGAGASIHCGFYSDKGGFRISVEDRSYMESCKAVVSTCAFGGGDDLYQPIGMSESSLKKVCFVAFWDEITLASQEADGHKVGDDRYIGKWRIILVKNLPFTDQRLNGKIPKMLAHRLFPNSRYSIWVDSKSQLRRDPLGVLEALLWRSNSVLAISEHGARSSVYDEAKAVVKKNKATPEEVAVQIAQYRQDGLPEDKRFNGKKALSEASIIVREHTPSTNLLMCLWFNEVVRFTSRDQLSFPYVLWRFKEFKNINMFPVCTRKDLVNSMGHIRKAKPLTG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="53661" PGL_stop="51787"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="53661" e_stop="53316"/>
            <exon e_start="52679" e_stop="52602"/>
            <exon e_start="52508" e_stop="52409"/>
            <exon e_start="52284" e_stop="51787"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.945" acc_prob="0.032" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.976" e_score="1.000"/>
          <exon-only e_score="0.984"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="53661" e_stop="53316" e_length="346"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.998">
            <gDNA_intron_boundary i_start="53315" i_stop="52680" i_length="636"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="52679" e_stop="52602" e_length="78"/>
          </exon>
          <intron i_serial="2" don_prob="0.945" acc_prob="0.032">
            <gDNA_intron_boundary i_start="52601" i_stop="52509" i_length="93"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="52508" e_stop="52409" e_length="100"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.976">
            <gDNA_intron_boundary i_start="52408" i_stop="52285" i_length="124"/>
          </intron>
          <exon e_serial="4" e_score="0.984">
            <gDNA_exon_boundary e_start="52284" e_stop="51787" e_length="498"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53661" stop="53316"/>
              <exon start="52679" stop="52602"/>
              <exon start="52508" stop="52409"/>
              <exon start="52284" stop="51787"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U325614" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53653" stop="53316"/>
              <exon start="52679" stop="52602"/>
              <exon start="52508" stop="52409"/>
              <exon start="52284" stop="52174"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U325615" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATGGCGATAAATGGTAGATTGTTACGTACCTCTAAGCAAATGGGCTTAGGTAACAATATTGGTGGCCAGAATCAGTATTATTCTTTGACGAATAATTATTCGTTACGATTTAAATGTTTGAGTAAAGGTAGACTTATTGGCGGAGCAGAGAAGAAGGTAGTAGTTGTAGCAACTAAGGCTGTTGGTACTGCGGTTGTATCTGAACCAATTACTACACAAAATTGGAAGATTTCAGATGTAAGTTTAGTCGCAGATAATGTATCAGATCTCATATTTCAAAAATTGAAAAATTTACTCAAACAAATGCCGCAGAAATTGCATCATTTACAGTCCTCCATTGAAAAG : GGTATTTTGGATTGCCGGTTCTTCAGTCTTTTAGCAGTTGCAGGGACATTGATTGGTTCATTATTATGCTTTATTGAG : GGTTGTTACTTAATCATAGAGTCATACATCCACTATTTTATCGCAATCTCACATAAATCAGACCTTGGACATGTAGTGCAGCTATTAATCGAAGCTATCG : ATATGTTTCTATTGGGGACTGCTATGCTTACATTTGGAATGGGATTGTATGTCATGTTTGTGGGATCAAGAAATATTAATGTTAAAGGAGATGATGATGATCAATTGTCAGGCAAAAAGTTGTATTATTTTCAAACACTTCCATCATTAATGGGAATGAAATCAGTAATGCAAGCAAAAGCAAGAATAGGACATGCACTTATAATGTTACTTCAAGTTGGAGTATTGGAGAAGTTCAAGAACATACCTGTGGTTAATGGATTGGATCTTGCTTGTTTTGCTGCTGCTGTTTTTGTTTCATCTATTTGTGTTTTCATTCTTTCTAGGCTTGCTGCCACTAACACAAAGGCTGGAGACTAAGAAAAATGCACATTTTTACACTATATGTATAAAGCAAGAAAAAAAAATTATAAGCAAAAAATAGGTCTTAGGACTTGTTGTAGTTGGCCTTATTATTTAACATAAATATTCTTTCAATTTGTAACAATTAAATACATTT</gDNA_template>
            <first_frame> N  G  D  K  W  *  I  V  T  Y  L  *  A  N  G  L  R  *  Q  Y  W  W  P  E  S  V  L  F  F  D  E  *  L  F  V  T  I  *  M  F  E  *  R  *  T  Y  W  R  S  R  E  E  G  S  S  C  S  N  *  G  C  W  Y  C  G  C  I  *  T  N  Y  Y  T  K  L  E  D  F  R  C  K  F  S  R  R  *  C  I  R  S  H  I  S  K  I  E  K  F  T  Q  T  N  A  A  E  I  A  S  F  T  V  L  H  *  K   : G  Y  F  G  L  P  V  L  Q  S  F  S  S  C  R  D  I  D  W  F  I  I  M  L  Y  *   : G  L  L  L  N  H  R  V  I  H  P  L  F  Y  R  N  L  T  *  I  R  P  W  T  C  S  A  A  I  N  R  S  Y  R :   Y  V  S  I  G  D  C  Y  A  Y  I  W  N  G  I  V  C  H  V  C  G  I  K  K  Y  *  C  *  R  R  *  *  *  S  I  V  R  Q  K  V  V  L  F  S  N  T  S  I  I  N  G  N  E  I  S  N  A  S  K  S  K  N  R  T  C  T  Y  N  V  T  S  S  W  S  I  G  E  V  Q  E  H  T  C  G  *  W  I  G  S  C  L  F  C  C  C  C  F  C  F  I  Y  L  C  F  H  S  F  *  A  C  C  H  *  H  K  G  W  R  L  R  K  M  H  I  F  T  L  Y  V  *  S  K  K  K  K  L  *  A  K  N  R  S  *  D  L  L  *  L  A  L  L  F  N  I  N  I  L  S  I  C  N  N  *  I  H   </first_frame>
            <second_frame>  M  A  I  N  G  R  L  L  R  T  S  K  Q  M  G  L  G  N  N  I  G  G  Q  N  Q  Y  Y  S  L  T  N  N  Y  S  L  R  F  K  C  L  S  K  G  R  L  I  G  G  A  E  K  K  V  V  V  V  A  T  K  A  V  G  T  A  V  V  S  E  P  I  T  T  Q  N  W  K  I  S  D  V  S  L  V  A  D  N  V  S  D  L  I  F  Q  K  L  K  N  L  L  K  Q  M  P  Q  K  L  H  H  L  Q  S  S  I  E  K  :  G  I  L  D  C  R  F  F  S  L  L  A  V  A  G  T  L  I  G  S  L  L  C  F  I  E  :  G  C  Y  L  I  I  E  S  Y  I  H  Y  F  I  A  I  S  H  K  S  D  L  G  H  V  V  Q  L  L  I  E  A  I   : D  M  F  L  L  G  T  A  M  L  T  F  G  M  G  L  Y  V  M  F  V  G  S  R  N  I  N  V  K  G  D  D  D  D  Q  L  S  G  K  K  L  Y  Y  F  Q  T  L  P  S  L  M  G  M  K  S  V  M  Q  A  K  A  R  I  G  H  A  L  I  M  L  L  Q  V  G  V  L  E  K  F  K  N  I  P  V  V  N  G  L  D  L  A  C  F  A  A  A  V  F  V  S  S  I  C  V  F  I  L  S  R  L  A  A  T  N  T  K  A  G  D  *  E  K  C  T  F  L  H  Y  M  Y  K  A  R  K  K  N  Y  K  Q  K  I  G  L  R  T  C  C  S  W  P  Y  Y  L  T  *  I  F  F  Q  F  V  T  I  K  Y  I  </second_frame>
            <third_frame>   W  R  *  M  V  D  C  Y  V  P  L  S  K  W  A  *  V  T  I  L  V  A  R  I  S  I  I  L  *  R  I  I  I  R  Y  D  L  N  V  *  V  K  V  D  L  L  A  E  Q  R  R  R  *  *  L  *  Q  L  R  L  L  V  L  R  L  Y  L  N  Q  L  L  H  K  I  G  R  F  Q  M  *  V  *  S  Q  I  M  Y  Q  I  S  Y  F  K  N  *  K  I  Y  S  N  K  C  R  R  N  C  I  I  Y  S  P  P  L  K  R :   V  F  W  I  A  G  S  S  V  F  *  Q  L  Q  G  H  *  L  V  H  Y  Y  A  L  L  R :   V  V  T  *  S  *  S  H  T  S  T  I  L  S  Q  S  H  I  N  Q  T  L  D  M  *  C  S  Y  *  S  K  L  S  :  I  C  F  Y  W  G  L  L  C  L  H  L  E  W  D  C  M  S  C  L  W  D  Q  E  I  L  M  L  K  E  M  M  M  I  N  C  Q  A  K  S  C  I  I  F  K  H  F  H  H  *  W  E  *  N  Q  *  C  K  Q  K  Q  E  *  D  M  H  L  *  C  Y  F  K  L  E  Y  W  R  S  S  R  T  Y  L  W  L  M  D  W  I  L  L  V  L  L  L  L  F  L  F  H  L  F  V  F  S  F  F  L  G  L  L  P  L  T  Q  R  L  E  T  K  K  N  A  H  F  Y  T  I  C  I  K  Q  E  K  K  I  I  S  K  K  *  V  L  G  L  V  V  V  G  L  I  I  *  H  K  Y  S  F  N  L  *  Q  L  N  T  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0223O22.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53660" stop="53316"/>
                    <exon start="52679" stop="52602"/>
                    <exon start="52508" stop="52409"/>
                    <exon start="52284" stop="51926"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>879</number_coding_nucleotides>
                  <number_encoded_amino_acids>293</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MAINGRLLRTSKQMGLGNNIGGQNQYYSLTNNYSLRFKCLSKGRLIGGAEKKVVVVATKAVGTAVVSEPITTQNWKISDVSLVADNVSDLIFQKLKNLLKQMPQKLHHLQSSIEKGILDCRFFSLLAVAGTLIGSLLCFIEGCYLIIESYIHYFIAISHKSDLGHVVQLLIEAIDMFLLGTAMLTFGMGLYVMFVGSRNINVKGDDDDQLSGKKLYYFQTLPSLMGMKSVMQAKARIGHALIMLLQVGVLEKFKNIPVVNGLDLACFAAAVFVSSICVFILSRLAATNTKAGD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="55286" PGL_stop="56721"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="55286" e_stop="55424"/>
            <exon e_start="55535" e_stop="55773"/>
            <exon e_start="56104" e_stop="56254"/>
            <exon e_start="56573" e_stop="56721"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.977" acc_prob="0.489" e_score="0.928"/>
          <exon-intron don_prob="1.000" acc_prob="0.831" e_score="0.992"/>
          <exon-intron don_prob="0.993" acc_prob="0.980" e_score="0.993"/>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.928">
            <gDNA_exon_boundary e_start="55286" e_stop="55424" e_length="139"/>
          </exon>
          <intron i_serial="1" don_prob="0.977" acc_prob="0.489">
            <gDNA_intron_boundary i_start="55425" i_stop="55534" i_length="110"/>
          </intron>
          <exon e_serial="2" e_score="0.992">
            <gDNA_exon_boundary e_start="55535" e_stop="55773" e_length="239"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.831">
            <gDNA_intron_boundary i_start="55774" i_stop="56103" i_length="330"/>
          </intron>
          <exon e_serial="3" e_score="0.993">
            <gDNA_exon_boundary e_start="56104" e_stop="56254" e_length="151"/>
          </exon>
          <intron i_serial="3" don_prob="0.993" acc_prob="0.980">
            <gDNA_intron_boundary i_start="56255" i_stop="56572" i_length="318"/>
          </intron>
          <exon e_serial="4" e_score="0.987">
            <gDNA_exon_boundary e_start="56573" e_stop="56721" e_length="149"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55286" stop="55424"/>
              <exon start="55535" stop="55773"/>
              <exon start="56104" stop="56254"/>
              <exon start="56573" stop="56721"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U341894" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAGAAATGGTTGTTTTCACAAATTCGATGTTCTGTTCAATTCCGCCATGGAAACTGAGAAACCCATCGAAGATTAAGGAACATTCTAGTACAGCTATACTCAAAAGCCCGACTTTGACAAGCTGTCAAGCCAAAAGATG : AGTTAGTTCCATATGCTAAAGCATGGTCCTGGCAAAAGACTATTGTTGATGAGAGGAAAGCACAAATTGAAAGGAATGAGGATCTTGCTGACACACTCATTGTGTTGCAGCATCAGCCGGTTTATACGTTGGGTACTGGTAGCTCTGAAGAGAATATACATTTTGATGTAAAGAAGGCTCCTTTTGAATTGTATCGAACAGAACGTGGTGGTGAAGTTACTTACCATGGCCCTGGTCAG : CTAGTTATGTACCCCATCATCAATCTTCGGTATCATAAGATGGACCTTCATTGGTACCTCAGGAGCCTTGAGGAGGTGATCATACGAGTTCTTTCTTCATCATTTTCTATGGAGGCTTCAAGAATTGATGGCCTAACCGGTGTTTGGGTTG : GGGGTCAGAAATTAGCTGCAATTGGCATTCGAGTATCTCAATGGGTCACCTATCATGGCCTGGCTCTCAATGTCACCACAGATCTGGCACCCTTTCAACAGATAGTTCCATGTGGGATCCGTGACCGTCAAGTTGGAAGCATAAAGGGA</gDNA_template>
            <first_frame> Q  K  W  L  F  S  Q  I  R  C  S  V  Q  F  R  H  G  N  *  E  T  H  R  R  L  R  N  I  L  V  Q  L  Y  S  K  A  R  L  *  Q  A  V  K  P  K  D   : E  L  V  P  Y  A  K  A  W  S  W  Q  K  T  I  V  D  E  R  K  A  Q  I  E  R  N  E  D  L  A  D  T  L  I  V  L  Q  H  Q  P  V  Y  T  L  G  T  G  S  S  E  E  N  I  H  F  D  V  K  K  A  P  F  E  L  Y  R  T  E  R  G  G  E  V  T  Y  H  G  P  G  Q  :  L  V  M  Y  P  I  I  N  L  R  Y  H  K  M  D  L  H  W  Y  L  R  S  L  E  E  V  I  I  R  V  L  S  S  S  F  S  M  E  A  S  R  I  D  G  L  T  G  V  W  V   : G  G  Q  K  L  A  A  I  G  I  R  V  S  Q  W  V  T  Y  H  G  L  A  L  N  V  T  T  D  L  A  P  F  Q  Q  I  V  P  C  G  I  R  D  R  Q  V  G  S  I  K  G </first_frame>
            <second_frame>  R  N  G  C  F  H  K  F  D  V  L  F  N  S  A  M  E  T  E  K  P  I  E  D  *  G  T  F  *  Y  S  Y  T  Q  K  P  D  F  D  K  L  S  S  Q  K  M  :  S  *  F  H  M  L  K  H  G  P  G  K  R  L  L  L  M  R  G  K  H  K  L  K  G  M  R  I  L  L  T  H  S  L  C  C  S  I  S  R  F  I  R  W  V  L  V  A  L  K  R  I  Y  I  L  M  *  R  R  L  L  L  N  C  I  E  Q  N  V  V  V  K  L  L  T  M  A  L  V  S :   *  L  C  T  P  S  S  I  F  G  I  I  R  W  T  F  I  G  T  S  G  A  L  R  R  *  S  Y  E  F  F  L  H  H  F  L  W  R  L  Q  E  L  M  A  *  P  V  F  G  L  :  G  V  R  N  *  L  Q  L  A  F  E  Y  L  N  G  S  P  I  M  A  W  L  S  M  S  P  Q  I  W  H  P  F  N  R  *  F  H  V  G  S  V  T  V  K  L  E  A  *  R   </second_frame>
            <third_frame>   E  M  V  V  F  T  N  S  M  F  C  S  I  P  P  W  K  L  R  N  P  S  K  I  K  E  H  S  S  T  A  I  L  K  S  P  T  L  T  S  C  Q  A  K  R  * :   V  S  S  I  C  *  S  M  V  L  A  K  D  Y  C  *  *  E  E  S  T  N  *  K  E  *  G  S  C  *  H  T  H  C  V  A  A  S  A  G  L  Y  V  G  Y  W  *  L  *  R  E  Y  T  F  *  C  K  E  G  S  F  *  I  V  S  N  R  T  W  W  *  S  Y  L  P  W  P  W  S   : A  S  Y  V  P  H  H  Q  S  S  V  S  *  D  G  P  S  L  V  P  Q  E  P  *  G  G  D  H  T  S  S  F  F  I  I  F  Y  G  G  F  K  N  *  W  P  N  R  C  L  G  W :   G  S  E  I  S  C  N  W  H  S  S  I  S  M  G  H  L  S  W  P  G  S  Q  C  H  H  R  S  G  T  L  S  T  D  S  S  M  W  D  P  *  P  S  S  W  K  H  K  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0223O22.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55403" stop="55424"/>
                    <exon start="55535" stop="55773"/>
                    <exon start="56104" stop="56254"/>
                    <exon start="56573" stop="56721"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>561</number_coding_nucleotides>
                  <number_encoded_amino_acids>187</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QAVKPKDELVPYAKAWSWQKTIVDERKAQIERNEDLADTLIVLQHQPVYTLGTGSSEENIHFDVKKAPFELYRTERGGEVTYHGPGQLVMYPIINLRYHKMDLHWYLRSLEEVIIRVLSSSFSMEASRIDGLTGVWVGGQKLAAIGIRVSQWVTYHGLALNVTTDLAPFQQIVPCGIRDRQVGSIKG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="64414" PGL_stop="66345"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="64414" e_stop="66345"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.986">
            <gDNA_exon_boundary e_start="64414" e_stop="66345" e_length="1932"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64414" stop="66345"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U318909" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64436" stop="65299"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U318910" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTGAACTCAACCTTCGCTTGTTGAACAAAAGTCAAGAGTTCAATTCTTGATTTTTTTCTAATAGAAATGGCATCAACTTCTCTTTCTCTTCCTTCTCTTAAGCTACAATTCCCCTCGCATACATCATCATCTTCTCGTAAAAATTCATCGTCTTATCGTGTTAGTATTCGTCCCATTCAGGCTTCGGTGTCTGAGATACCACCTTACATTTCATCACCATCACAATCACCATCATCATCGTCATCACCACCTGTTAAACAAGCGAAACTCCCAGCCCAAAAAGTCCCTGGAGATTATGGACTACCATTAGTTGGTCCATGGAAAGACAGACTTGATTACTTCTACAATCAGGGCAAAAATGAATTCTTCAAATCAAGAATTCAGAAGCATCAGTCTACTGTTTTTCGAACGAACATGCCACCAGGTCCATTCATTTCATTCAATCCAAACGTTGTTGTTTTGCTAGATGGTAAAAGTTTCCCCGTACTTTTTGATGTATCTAAAGTTGAAAAAAAGGATCTTTTCACCGGTACTTTCATGCCATCCACTGATCTCACAGGCGGTTATCGAGTTCTATCCTATCTTGATCCTTCTGAACCAAACCATGCCAAATTGAAGAAACTCATGTTTTATCTCCTTTCATCACGACGCAATGAAGTTATTCCAGAGTTTCACAATAGCTACTCCGAGCTATTTGAAACTCTGGAAAACGAACTCTCCACGAAAGGTAAAGCTGGGCTCAATGCAGCAAATGATCAAGCTGCATTTAACTTCCTGGCTAGGTCTTTATATGGCATTAATCCTCAAGACACCGAACTTGGAACCGATGGACCTAAGTTGATCGGAAAATGGGTGCTGTTCCAGCTTCATCCTTTGCTAATTCTCGGCCTCCCAAAGGTTCTTGAAGACCTTGTTATGCATACTTTCAGACTTCCCCCTGCCTTGGTGAAAAAAGATTACCAGAGATTGTACAATTTCTTCTACGAAAACTCAACTTCAGTTCTTGATGAAGCAGAAAAAATTGGTATTTCTCGGGAAGAAGCTTGTCATAATTTGCTATTCGCGACATGTTTCAATTCATTCGGAGGAATCAAAATCTTTTTCCCGAATATGTTGAAATGGATAGGCAGAGCAGGGGCTAAACTCCACAGTCAATTAGCACAAGAAATTCGTTCAGTCATTTCATCAAACAGTGGGAAGGTCACAATGGCTGCCATGGAAAAAATGCCACTAATGAAATCAGTAGTCTACGAATCCCTCAGAATTGAACCTCCGGTAGCATCACAATACGGCAGAGCAAAACACGACATGGTAATTGAATCCCACGACGCATCATTCGAAATCAAAGAAGGTGAACTCCTTTATGGGTATCAACCATTTGCAACTAAAGACCCAAAAATCTTCGATCGATCGGAAGAATTCGTCGCCGATCGGTTCATCGGAGAAGAAGGGGAGAAGCTGTTGAAACACGTGTTATGGTCAAATGGGTCGGAAACTGAAAACGCATCGATAAATAACAAACAGTGTGCCGGAAAAGACTTCGTCGTACTGGTTTCAAGATTGTTGCTGGTCGAACTGTTCCTCCGATATGATTCGTTTGAGATTGAAGTCGGTGCATCTCCATTAGGAGCTGCAATTACCTTAACTTCTCTGAGAAGAGCCAGTTTTTGATGAACACTGGCTTAATTAAGAAATTAGTAATCTTGTTTAGTGTATTATATTTCATTGTTGTGTTATTAAGAAATAATTAATTTACAGAACAGAGCATGCCGGCCAGCCGGCGGCGGTAATTGAGGAAGAGGCCGGTGATGTGTATAGTTTAGTATAGTAAATATTTTTTGTTGGAAAATGGAATGTGTAACTATGTTAATGATCAATGTAATATGTTGTTCTCAATAAATACAATAGATAATTCACCCCTCCAAATTATAT</gDNA_template>
            <first_frame> L  N  S  T  F  A  C  *  T  K  V  K  S  S  I  L  D  F  F  L  I  E  M  A  S  T  S  L  S  L  P  S  L  K  L  Q  F  P  S  H  T  S  S  S  S  R  K  N  S  S  S  Y  R  V  S  I  R  P  I  Q  A  S  V  S  E  I  P  P  Y  I  S  S  P  S  Q  S  P  S  S  S  S  S  P  P  V  K  Q  A  K  L  P  A  Q  K  V  P  G  D  Y  G  L  P  L  V  G  P  W  K  D  R  L  D  Y  F  Y  N  Q  G  K  N  E  F  F  K  S  R  I  Q  K  H  Q  S  T  V  F  R  T  N  M  P  P  G  P  F  I  S  F  N  P  N  V  V  V  L  L  D  G  K  S  F  P  V  L  F  D  V  S  K  V  E  K  K  D  L  F  T  G  T  F  M  P  S  T  D  L  T  G  G  Y  R  V  L  S  Y  L  D  P  S  E  P  N  H  A  K  L  K  K  L  M  F  Y  L  L  S  S  R  R  N  E  V  I  P  E  F  H  N  S  Y  S  E  L  F  E  T  L  E  N  E  L  S  T  K  G  K  A  G  L  N  A  A  N  D  Q  A  A  F  N  F  L  A  R  S  L  Y  G  I  N  P  Q  D  T  E  L  G  T  D  G  P  K  L  I  G  K  W  V  L  F  Q  L  H  P  L  L  I  L  G  L  P  K  V  L  E  D  L  V  M  H  T  F  R  L  P  P  A  L  V  K  K  D  Y  Q  R  L  Y  N  F  F  Y  E  N  S  T  S  V  L  D  E  A  E  K  I  G  I  S  R  E  E  A  C  H  N  L  L  F  A  T  C  F  N  S  F  G  G  I  K  I  F  F  P  N  M  L  K  W  I  G  R  A  G  A  K  L  H  S  Q  L  A  Q  E  I  R  S  V  I  S  S  N  S  G  K  V  T  M  A  A  M  E  K  M  P  L  M  K  S  V  V  Y  E  S  L  R  I  E  P  P  V  A  S  Q  Y  G  R  A  K  H  D  M  V  I  E  S  H  D  A  S  F  E  I  K  E  G  E  L  L  Y  G  Y  Q  P  F  A  T  K  D  P  K  I  F  D  R  S  E  E  F  V  A  D  R  F  I  G  E  E  G  E  K  L  L  K  H  V  L  W  S  N  G  S  E  T  E  N  A  S  I  N  N  K  Q  C  A  G  K  D  F  V  V  L  V  S  R  L  L  L  V  E  L  F  L  R  Y  D  S  F  E  I  E  V  G  A  S  P  L  G  A  A  I  T  L  T  S  L  R  R  A  S  F  *  *  T  L  A  *  L  R  N  *  *  S  C  L  V  Y  Y  I  S  L  L  C  Y  *  E  I  I  N  L  Q  N  R  A  C  R  P  A  G  G  G  N  *  G  R  G  R  *  C  V  *  F  S  I  V  N  I  F  C  W  K  M  E  C  V  T  M  L  M  I  N  V  I  C  C  S  Q  *  I  Q  *  I  I  H  P  S  K  L  Y </first_frame>
            <second_frame>  *  T  Q  P  S  L  V  E  Q  K  S  R  V  Q  F  L  I  F  F  *  *  K  W  H  Q  L  L  F  L  F  L  L  L  S  Y  N  S  P  R  I  H  H  H  L  L  V  K  I  H  R  L  I  V  L  V  F  V  P  F  R  L  R  C  L  R  Y  H  L  T  F  H  H  H  H  N  H  H  H  H  R  H  H  H  L  L  N  K  R  N  S  Q  P  K  K  S  L  E  I  M  D  Y  H  *  L  V  H  G  K  T  D  L  I  T  S  T  I  R  A  K  M  N  S  S  N  Q  E  F  R  S  I  S  L  L  F  F  E  R  T  C  H  Q  V  H  S  F  H  S  I  Q  T  L  L  F  C  *  M  V  K  V  S  P  Y  F  L  M  Y  L  K  L  K  K  R  I  F  S  P  V  L  S  C  H  P  L  I  S  Q  A  V  I  E  F  Y  P  I  L  I  L  L  N  Q  T  M  P  N  *  R  N  S  C  F  I  S  F  H  H  D  A  M  K  L  F  Q  S  F  T  I  A  T  P  S  Y  L  K  L  W  K  T  N  S  P  R  K  V  K  L  G  S  M  Q  Q  M  I  K  L  H  L  T  S  W  L  G  L  Y  M  A  L  I  L  K  T  P  N  L  E  P  M  D  L  S  *  S  E  N  G  C  C  S  S  F  I  L  C  *  F  S  A  S  Q  R  F  L  K  T  L  L  C  I  L  S  D  F  P  L  P  W  *  K  K  I  T  R  D  C  T  I  S  S  T  K  T  Q  L  Q  F  L  M  K  Q  K  K  L  V  F  L  G  K  K  L  V  I  I  C  Y  S  R  H  V  S  I  H  S  E  E  S  K  S  F  S  R  I  C  *  N  G  *  A  E  Q  G  L  N  S  T  V  N  *  H  K  K  F  V  Q  S  F  H  Q  T  V  G  R  S  Q  W  L  P  W  K  K  C  H  *  *  N  Q  *  S  T  N  P  S  E  L  N  L  R  *  H  H  N  T  A  E  Q  N  T  T  W  *  L  N  P  T  T  H  H  S  K  S  K  K  V  N  S  F  M  G  I  N  H  L  Q  L  K  T  Q  K  S  S  I  D  R  K  N  S  S  P  I  G  S  S  E  K  K  G  R  S  C  *  N  T  C  Y  G  Q  M  G  R  K  L  K  T  H  R  *  I  T  N  S  V  P  E  K  T  S  S  Y  W  F  Q  D  C  C  W  S  N  C  S  S  D  M  I  R  L  R  L  K  S  V  H  L  H  *  E  L  Q  L  P  *  L  L  *  E  E  P  V  F  D  E  H  W  L  N  *  E  I  S  N  L  V  *  C  I  I  F  H  C  C  V  I  K  K  *  L  I  Y  R  T  E  H  A  G  Q  P  A  A  V  I  E  E  E  A  G  D  V  Y  S  L  V  *  *  I  F  F  V  G  K  W  N  V  *  L  C  *  *  S  M  *  Y  V  V  L  N  K  Y  N  R  *  F  T  P  P  N  Y   </second_frame>
            <third_frame>   E  L  N  L  R  L  L  N  K  S  Q  E  F  N  S  *  F  F  S  N  R  N  G  I  N  F  S  F  S  S  F  S  *  A  T  I  P  L  A  Y  I  I  I  F  S  *  K  F  I  V  L  S  C  *  Y  S  S  H  S  G  F  G  V  *  D  T  T  L  H  F  I  T  I  T  I  T  I  I  I  V  I  T  T  C  *  T  S  E  T  P  S  P  K  S  P  W  R  L  W  T  T  I  S  W  S  M  E  R  Q  T  *  L  L  L  Q  S  G  Q  K  *  I  L  Q  I  K  N  S  E  A  S  V  Y  C  F  S  N  E  H  A  T  R  S  I  H  F  I  Q  S  K  R  C  C  F  A  R  W  *  K  F  P  R  T  F  *  C  I  *  S  *  K  K  G  S  F  H  R  Y  F  H  A  I  H  *  S  H  R  R  L  S  S  S  I  L  S  *  S  F  *  T  K  P  C  Q  I  E  E  T  H  V  L  S  P  F  I  T  T  Q  *  S  Y  S  R  V  S  Q  *  L  L  R  A  I  *  N  S  G  K  R  T  L  H  E  R  *  S  W  A  Q  C  S  K  *  S  S  C  I  *  L  P  G  *  V  F  I  W  H  *  S  S  R  H  R  T  W  N  R  W  T  *  V  D  R  K  M  G  A  V  P  A  S  S  F  A  N  S  R  P  P  K  G  S  *  R  P  C  Y  A  Y  F  Q  T  S  P  C  L  G  E  K  R  L  P  E  I  V  Q  F  L  L  R  K  L  N  F  S  S  *  *  S  R  K  N  W  Y  F  S  G  R  S  L  S  *  F  A  I  R  D  M  F  Q  F  I  R  R  N  Q  N  L  F  P  E  Y  V  E  M  D  R  Q  S  R  G  *  T  P  Q  S  I  S  T  R  N  S  F  S  H  F  I  K  Q  W  E  G  H  N  G  C  H  G  K  N  A  T  N  E  I  S  S  L  R  I  P  Q  N  *  T  S  G  S  I  T  I  R  Q  S  K  T  R  H  G  N  *  I  P  R  R  I  I  R  N  Q  R  R  *  T  P  L  W  V  S  T  I  C  N  *  R  P  K  N  L  R  S  I  G  R  I  R  R  R  S  V  H  R  R  R  R  G  E  A  V  E  T  R  V  M  V  K  W  V  G  N  *  K  R  I  D  K  *  Q  T  V  C  R  K  R  L  R  R  T  G  F  K  I  V  A  G  R  T  V  P  P  I  *  F  V  *  D  *  S  R  C  I  S  I  R  S  C  N  Y  L  N  F  S  E  K  S  Q  F  L  M  N  T  G  L  I  K  K  L  V  I  L  F  S  V  L  Y  F  I  V  V  L  L  R  N  N  *  F  T  E  Q  S  M  P  A  S  R  R  R  *  L  R  K  R  P  V  M  C  I  V  *  Y  S  K  Y  F  L  L  E  N  G  M  C  N  Y  V  N  D  Q  C  N  M  L  F  S  I  N  T  I  D  N  S  P  L  Q  I  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0223O22.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="64438" stop="66084"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1644</number_coding_nucleotides>
                  <number_encoded_amino_acids>548</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TKVKSSILDFFLIEMASTSLSLPSLKLQFPSHTSSSSRKNSSSYRVSIRPIQASVSEIPPYISSPSQSPSSSSSPPVKQAKLPAQKVPGDYGLPLVGPWKDRLDYFYNQGKNEFFKSRIQKHQSTVFRTNMPPGPFISFNPNVVVLLDGKSFPVLFDVSKVEKKDLFTGTFMPSTDLTGGYRVLSYLDPSEPNHAKLKKLMFYLLSSRRNEVIPEFHNSYSELFETLENELSTKGKAGLNAANDQAAFNFLARSLYGINPQDTELGTDGPKLIGKWVLFQLHPLLILGLPKVLEDLVMHTFRLPPALVKKDYQRLYNFFYENSTSVLDEAEKIGISREEACHNLLFATCFNSFGGIKIFFPNMLKWIGRAGAKLHSQLAQEIRSVISSNSGKVTMAAMEKMPLMKSVVYESLRIEPPVASQYGRAKHDMVIESHDASFEIKEGELLYGYQPFATKDPKIFDRSEEFVADRFIGEEGEKLLKHVLWSNGSETENASINNKQCAGKDFVVLVSRLLLVELFLRYDSFEIEVGASPLGAAITLTSLRRASF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="68991" PGL_stop="70696"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="68991" e_stop="69845"/>
            <exon e_start="70008" e_stop="70696"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.985" acc_prob="0.996" e_score="0.989"/>
          <exon-only e_score="0.974"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="68991" e_stop="69845" e_length="855"/>
          </exon>
          <intron i_serial="1" don_prob="0.985" acc_prob="0.996">
            <gDNA_intron_boundary i_start="69846" i_stop="70007" i_length="162"/>
          </intron>
          <exon e_serial="2" e_score="0.974">
            <gDNA_exon_boundary e_start="70008" e_stop="70696" e_length="689"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68991" stop="69845"/>
              <exon start="70008" stop="70696"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U318054" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTAATTTTATATATAAGAAAATAACAGCAATGATTGTACCGGCCGGAAAAATGGAAGTAACTACCGGCGAAACTAACACAATCTATCCATCTAAGCCGCCTTTCACAGAAAACCATGTCCTTCCTCTCTCCCATATTGACACCGATCGGAACCTCAATTTCACTTTCCGATACCTCCGTGTCTACGTCAATGACGACACCACATCAGACCCATATGAAGTTGTCACCTCCTCCCTCTCCGCCGCTCTCGTCCACTACTACCAATTCGCCGGCTCTCTCCGCCGTCGTCCATCGGACAACCGTCTAGAGCTTCACTGTCAAGTGGGGGATGGCGTTCCCGTAATTCCGTCGACGGTGGATTGTACCTTGGCTTCAATGAACTACCTGGATGATCCGGATTATAACTTGGCTGAGAAGCTGGTACCCGACCCGAGAGATGAGGAGGCGTTGACCCGACCCTTGATTTTGCAAGTGAACCGTTTTAAGTGTGGTGGGTGGGTTTTCGGAACGGCGGTTCATCACGCCATGTGTGATGGAATGGGTTCGACGCTGTTTTTTCATGCTATGGCGGAGATTGCTCGTGGGGAGAAGGGGATGAAGATTGAACCGGTGTGGGACCGGTCGAATTTGCTTGGACCGAGGAATCCACCACGAGTTGAATTTCCGGTTCATGAGTTCCTCAGTTTGGATAGGGATTCGTGTCCATACTTGGAATCAGGTAACTCGGCAGTTCGAGAGTGCTTTGAGGTGAAAGATGAGTGGTTGGATAGACTAAAGGGGTTTCTTCATGAGCAATCTGCAGGTTCAAAGTATACAACTTTTGAAGCTTTGGGAGCTTTCATATGGCGAGCAAA : GGTAAAGGCTTGTAAAATGTCAGATGATGAGACAGTGAAGTATGCTTATCTAACCAATATCAGAAGAAGAGTGAAGCCACCATTGCCAGCAGGTTACTGGGGCAATGGCTGTGTGCCAATATACGTTCAGCTCCTCGCAAAAGACATCATCAATGAACCTATCTGGAAAGCAGCAGACGCGATAAAGAAGAGCAAGGACATCATCACAGATGAGTATGTTCGTTCGTTCATTGATTTTCAGGAGCTGCATTATGATGAAGGGATCACATCAGGGAATAGAGTGAGTGCATTTACAGATTGGCGGCATGTAGGCCACGAGACGGTTGATTTTGGATGGGGTGGCCCTGTGACTGTCTTTCCTCTGTCTAGACACTTAGTTGGGAGTGTTGAACCTTGCTTTTTCTTGCCTTGTTCTTCTAAAACTCAAGGTAAGAAAGATGGTTTCAAAGTTTTGGTCTGTCTGCAACAAGAAGCCATGCCCGTTTTCATGGAAGAGATGGAAAAGTTGGAGCATGGACTTGCTTGATTGATTTTACTATATATATGTGTGTGTGTTATACTAAACTAATAAAAACAACATTTACAAGTAGAGACCAAATTTGGCATATGTATTACTACATTTTCGACTGCTAAATGTTCTTGTAAGTAAATTACAATGAAGAAATGTAATCCTTTACATAATTTAACTA</gDNA_template>
            <first_frame> F  *  F  Y  I  *  E  N  N  S  N  D  C  T  G  R  K  N  G  S  N  Y  R  R  N  *  H  N  L  S  I  *  A  A  F  H  R  K  P  C  P  S  S  L  P  Y  *  H  R  S  E  P  Q  F  H  F  P  I  P  P  C  L  R  Q  *  R  H  H  I  R  P  I  *  S  C  H  L  L  P  L  R  R  S  R  P  L  L  P  I  R  R  L  S  P  P  S  S  I  G  Q  P  S  R  A  S  L  S  S  G  G  W  R  S  R  N  S  V  D  G  G  L  Y  L  G  F  N  E  L  P  G  *  S  G  L  *  L  G  *  E  A  G  T  R  P  E  R  *  G  G  V  D  P  T  L  D  F  A  S  E  P  F  *  V  W  W  V  G  F  R  N  G  G  S  S  R  H  V  *  W  N  G  F  D  A  V  F  S  C  Y  G  G  D  C  S  W  G  E  G  D  E  D  *  T  G  V  G  P  V  E  F  A  W  T  E  E  S  T  T  S  *  I  S  G  S  *  V  P  Q  F  G  *  G  F  V  S  I  L  G  I  R  *  L  G  S  S  R  V  L  *  G  E  R  *  V  V  G  *  T  K  G  V  S  S  *  A  I  C  R  F  K  V  Y  N  F  *  S  F  G  S  F  H  M  A  S  K  :  G  K  G  L  *  N  V  R  *  *  D  S  E  V  C  L  S  N  Q  Y  Q  K  K  S  E  A  T  I  A  S  R  L  L  G  Q  W  L  C  A  N  I  R  S  A  P  R  K  R  H  H  Q  *  T  Y  L  E  S  S  R  R  D  K  E  E  Q  G  H  H  H  R  *  V  C  S  F  V  H  *  F  S  G  A  A  L  *  *  R  D  H  I  R  E  *  S  E  C  I  Y  R  L  A  A  C  R  P  R  D  G  *  F  W  M  G  W  P  C  D  C  L  S  S  V  *  T  L  S  W  E  C  *  T  L  L  F  L  A  L  F  F  *  N  S  R  *  E  R  W  F  Q  S  F  G  L  S  A  T  R  S  H  A  R  F  H  G  R  D  G  K  V  G  A  W  T  C  L  I  D  F  T  I  Y  M  C  V  C  Y  T  K  L  I  K  T  T  F  T  S  R  D  Q  I  W  H  M  Y  Y  Y  I  F  D  C  *  M  F  L  *  V  N  Y  N  E  E  M  *  S  F  T  *  F  N   </first_frame>
            <second_frame>  F  N  F  I  Y  K  K  I  T  A  M  I  V  P  A  G  K  M  E  V  T  T  G  E  T  N  T  I  Y  P  S  K  P  P  F  T  E  N  H  V  L  P  L  S  H  I  D  T  D  R  N  L  N  F  T  F  R  Y  L  R  V  Y  V  N  D  D  T  T  S  D  P  Y  E  V  V  T  S  S  L  S  A  A  L  V  H  Y  Y  Q  F  A  G  S  L  R  R  R  P  S  D  N  R  L  E  L  H  C  Q  V  G  D  G  V  P  V  I  P  S  T  V  D  C  T  L  A  S  M  N  Y  L  D  D  P  D  Y  N  L  A  E  K  L  V  P  D  P  R  D  E  E  A  L  T  R  P  L  I  L  Q  V  N  R  F  K  C  G  G  W  V  F  G  T  A  V  H  H  A  M  C  D  G  M  G  S  T  L  F  F  H  A  M  A  E  I  A  R  G  E  K  G  M  K  I  E  P  V  W  D  R  S  N  L  L  G  P  R  N  P  P  R  V  E  F  P  V  H  E  F  L  S  L  D  R  D  S  C  P  Y  L  E  S  G  N  S  A  V  R  E  C  F  E  V  K  D  E  W  L  D  R  L  K  G  F  L  H  E  Q  S  A  G  S  K  Y  T  T  F  E  A  L  G  A  F  I  W  R  A  K :   V  K  A  C  K  M  S  D  D  E  T  V  K  Y  A  Y  L  T  N  I  R  R  R  V  K  P  P  L  P  A  G  Y  W  G  N  G  C  V  P  I  Y  V  Q  L  L  A  K  D  I  I  N  E  P  I  W  K  A  A  D  A  I  K  K  S  K  D  I  I  T  D  E  Y  V  R  S  F  I  D  F  Q  E  L  H  Y  D  E  G  I  T  S  G  N  R  V  S  A  F  T  D  W  R  H  V  G  H  E  T  V  D  F  G  W  G  G  P  V  T  V  F  P  L  S  R  H  L  V  G  S  V  E  P  C  F  F  L  P  C  S  S  K  T  Q  G  K  K  D  G  F  K  V  L  V  C  L  Q  Q  E  A  M  P  V  F  M  E  E  M  E  K  L  E  H  G  L  A  *  L  I  L  L  Y  I  C  V  C  V  I  L  N  *  *  K  Q  H  L  Q  V  E  T  K  F  G  I  C  I  T  T  F  S  T  A  K  C  S  C  K  *  I  T  M  K  K  C  N  P  L  H  N  L  T  </second_frame>
            <third_frame>   L  I  L  Y  I  R  K  *  Q  Q  *  L  Y  R  P  E  K  W  K  *  L  P  A  K  L  T  Q  S  I  H  L  S  R  L  S  Q  K  T  M  S  F  L  S  P  I  L  T  P  I  G  T  S  I  S  L  S  D  T  S  V  S  T  S  M  T  T  P  H  Q  T  H  M  K  L  S  P  P  P  S  P  P  L  S  S  T  T  T  N  S  P  A  L  S  A  V  V  H  R  T  T  V  *  S  F  T  V  K  W  G  M  A  F  P  *  F  R  R  R  W  I  V  P  W  L  Q  *  T  T  W  M  I  R  I  I  T  W  L  R  S  W  Y  P  T  R  E  M  R  R  R  *  P  D  P  *  F  C  K  *  T  V  L  S  V  V  G  G  F  S  E  R  R  F  I  T  P  C  V  M  E  W  V  R  R  C  F  F  M  L  W  R  R  L  L  V  G  R  R  G  *  R  L  N  R  C  G  T  G  R  I  C  L  D  R  G  I  H  H  E  L  N  F  R  F  M  S  S  S  V  W  I  G  I  R  V  H  T  W  N  Q  V  T  R  Q  F  E  S  A  L  R  *  K  M  S  G  W  I  D  *  R  G  F  F  M  S  N  L  Q  V  Q  S  I  Q  L  L  K  L  W  E  L  S  Y  G  E  Q   : R  *  R  L  V  K  C  Q  M  M  R  Q  *  S  M  L  I  *  P  I  S  E  E  E  *  S  H  H  C  Q  Q  V  T  G  A  M  A  V  C  Q  Y  T  F  S  S  S  Q  K  T  S  S  M  N  L  S  G  K  Q  Q  T  R  *  R  R  A  R  T  S  S  Q  M  S  M  F  V  R  S  L  I  F  R  S  C  I  M  M  K  G  S  H  Q  G  I  E  *  V  H  L  Q  I  G  G  M  *  A  T  R  R  L  I  L  D  G  V  A  L  *  L  S  F  L  C  L  D  T  *  L  G  V  L  N  L  A  F  S  C  L  V  L  L  K  L  K  V  R  K  M  V  S  K  F  W  S  V  C  N  K  K  P  C  P  F  S  W  K  R  W  K  S  W  S  M  D  L  L  D  *  F  Y  Y  I  Y  V  C  V  L  Y  *  T  N  K  N  N  I  Y  K  *  R  P  N  L  A  Y  V  L  L  H  F  R  L  L  N  V  L  V  S  K  L  Q  *  R  N  V  I  L  Y  I  I  *  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0223O22.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68992" stop="69845"/>
                    <exon start="70008" stop="70533"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1377</number_coding_nucleotides>
                  <number_encoded_amino_acids>459</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FNFIYKKITAMIVPAGKMEVTTGETNTIYPSKPPFTENHVLPLSHIDTDRNLNFTFRYLRVYVNDDTTSDPYEVVTSSLSAALVHYYQFAGSLRRRPSDNRLELHCQVGDGVPVIPSTVDCTLASMNYLDDPDYNLAEKLVPDPRDEEALTRPLILQVNRFKCGGWVFGTAVHHAMCDGMGSTLFFHAMAEIARGEKGMKIEPVWDRSNLLGPRNPPRVEFPVHEFLSLDRDSCPYLESGNSAVRECFEVKDEWLDRLKGFLHEQSAGSKYTTFEALGAFIWRAKVKACKMSDDETVKYAYLTNIRRRVKPPLPAGYWGNGCVPIYVQLLAKDIINEPIWKAADAIKKSKDIITDEYVRSFIDFQELHYDEGITSGNRVSAFTDWRHVGHETVDFGWGGPVTVFPLSRHLVGSVEPCFFLPCSSKTQGKKDGFKVLVCLQQEAMPVFMEEMEKLEHGLA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="71927" PGL_stop="71055"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="71927" e_stop="71055"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="71927" e_stop="71055" e_length="873"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71927" stop="71055"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U330002" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGCTTCGTTAATGGTTAGTGTAGGCCTAATATGCTGCTTTATTCGACGAAGATTGAATTTCCAAAACAGAACAAGAAGAAGCCGCGAGTTATGTGAGACTACAGGGATCAGCATCCCCGTTTATCAGTACAAAGAAATGGAAAAAGCAACTGATTTCTTCTCTGAGAAACGGAGACTAGGAAATGGCGCGTATGGAACAGTTTATTCTGGAAAACTTCAAACTGACAATTGGGTAGCTATCAAAAGAATTAGACACAGAGATACTGATAGCATTGAACAATTCATCAATGAAATCAAGCTCCTTTCCTCTGTCAATCATCCAAACCTCGTTCGTCTCTTAGGCTGCTCAATCGAAAATGGTGAACAGATACTTGTTTATGAATACATGCCTAATGGGACTTTGTCACAACATATACAAAGAGAAAAAGGGAACGGGCTTCCATGGCCTGTTCGTCTTACAATTGGTGCAGAAACTGCACAAGCTATAGCTTATTTGCATAATGCAATGCATCCTCCTATATATCACAGAGATGTTAAGTCAAGTAATATACTCTTGGATTACAATTACAAGTCAAAAGTAGCAGATTTTGGACTGTCAAGACTCGGTTTGGTTGAATCGTCTCACATTTCTACTGCACCACAAGGAACTCCGGGATATCTAGATCCTCAGTATCATCAGAACTTTCAGTTGTCTGATAAGAGCGATGTTTATAGTTTTGGTGTTGTTCTTGCTGAGATCATAACAGGACTAAAAGCAGTAGACTTTGCTCGTCCTCAAGACGAAATAAACTTGGCTGCACTTGCTATTGACAGAATAGGAAAGGGAAACTTAGATGAAATTATCGATCCATTTATCGAGTTACATATGGATGC</gDNA_template>
            <first_frame> C  F  V  N  G  *  C  R  P  N  M  L  L  Y  S  T  K  I  E  F  P  K  Q  N  K  K  K  P  R  V  M  *  D  Y  R  D  Q  H  P  R  L  S  V  Q  R  N  G  K  S  N  *  F  L  L  *  E  T  E  T  R  K  W  R  V  W  N  S  L  F  W  K  T  S  N  *  Q  L  G  S  Y  Q  K  N  *  T  Q  R  Y  *  *  H  *  T  I  H  Q  *  N  Q  A  P  F  L  C  Q  S  S  K  P  R  S  S  L  R  L  L  N  R  K  W  *  T  D  T  C  L  *  I  H  A  *  W  D  F  V  T  T  Y  T  K  R  K  R  E  R  A  S  M  A  C  S  S  Y  N  W  C  R  N  C  T  S  Y  S  L  F  A  *  C  N  A  S  S  Y  I  S  Q  R  C  *  V  K  *  Y  T  L  G  L  Q  L  Q  V  K  S  S  R  F  W  T  V  K  T  R  F  G  *  I  V  S  H  F  Y  C  T  T  R  N  S  G  I  S  R  S  S  V  S  S  E  L  S  V  V  *  *  E  R  C  L  *  F  W  C  C  S  C  *  D  H  N  R  T  K  S  S  R  L  C  S  S  S  R  R  N  K  L  G  C  T  C  Y  *  Q  N  R  K  G  K  L  R  *  N  Y  R  S  I  Y  R  V  T  Y  G  C </first_frame>
            <second_frame>  A  S  L  M  V  S  V  G  L  I  C  C  F  I  R  R  R  L  N  F  Q  N  R  T  R  R  S  R  E  L  C  E  T  T  G  I  S  I  P  V  Y  Q  Y  K  E  M  E  K  A  T  D  F  F  S  E  K  R  R  L  G  N  G  A  Y  G  T  V  Y  S  G  K  L  Q  T  D  N  W  V  A  I  K  R  I  R  H  R  D  T  D  S  I  E  Q  F  I  N  E  I  K  L  L  S  S  V  N  H  P  N  L  V  R  L  L  G  C  S  I  E  N  G  E  Q  I  L  V  Y  E  Y  M  P  N  G  T  L  S  Q  H  I  Q  R  E  K  G  N  G  L  P  W  P  V  R  L  T  I  G  A  E  T  A  Q  A  I  A  Y  L  H  N  A  M  H  P  P  I  Y  H  R  D  V  K  S  S  N  I  L  L  D  Y  N  Y  K  S  K  V  A  D  F  G  L  S  R  L  G  L  V  E  S  S  H  I  S  T  A  P  Q  G  T  P  G  Y  L  D  P  Q  Y  H  Q  N  F  Q  L  S  D  K  S  D  V  Y  S  F  G  V  V  L  A  E  I  I  T  G  L  K  A  V  D  F  A  R  P  Q  D  E  I  N  L  A  A  L  A  I  D  R  I  G  K  G  N  L  D  E  I  I  D  P  F  I  E  L  H  M  D   </second_frame>
            <third_frame>   L  R  *  W  L  V  *  A  *  Y  A  A  L  F  D  E  D  *  I  S  K  T  E  Q  E  E  A  A  S  Y  V  R  L  Q  G  S  A  S  P  F  I  S  T  K  K  W  K  K  Q  L  I  S  S  L  R  N  G  D  *  E  M  A  R  M  E  Q  F  I  L  E  N  F  K  L  T  I  G  *  L  S  K  E  L  D  T  E  I  L  I  A  L  N  N  S  S  M  K  S  S  S  F  P  L  S  I  I  Q  T  S  F  V  S  *  A  A  Q  S  K  M  V  N  R  Y  L  F  M  N  T  C  L  M  G  L  C  H  N  I  Y  K  E  K  K  G  T  G  F  H  G  L  F  V  L  Q  L  V  Q  K  L  H  K  L  *  L  I  C  I  M  Q  C  I  L  L  Y  I  T  E  M  L  S  Q  V  I  Y  S  W  I  T  I  T  S  Q  K  *  Q  I  L  D  C  Q  D  S  V  W  L  N  R  L  T  F  L  L  H  H  K  E  L  R  D  I  *  I  L  S  I  I  R  T  F  S  C  L  I  R  A  M  F  I  V  L  V  L  F  L  L  R  S  *  Q  D  *  K  Q  *  T  L  L  V  L  K  T  K  *  T  W  L  H  L  L  L  T  E  *  E  R  E  T  *  M  K  L  S  I  H  L  S  S  Y  I  W  M  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0223O22.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71926" stop="71057"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>870</number_coding_nucleotides>
                  <number_encoded_amino_acids>290</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ASLMVSVGLICCFIRRRLNFQNRTRRSRELCETTGISIPVYQYKEMEKATDFFSEKRRLGNGAYGTVYSGKLQTDNWVAIKRIRHRDTDSIEQFINEIKLLSSVNHPNLVRLLGCSIENGEQILVYEYMPNGTLSQHIQREKGNGLPWPVRLTIGAETAQAIAYLHNAMHPPIYHRDVKSSNILLDYNYKSKVADFGLSRLGLVESSHISTAPQGTPGYLDPQYHQNFQLSDKSDVYSFGVVLAEIITGLKAVDFARPQDEINLAALAIDRIGKGNLDEIIDPFIELHMD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="74630" PGL_stop="74046"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="74630" e_stop="74046"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="74630" e_stop="74046" e_length="585"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74630" stop="74046"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U346151" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCACATGTCCTCAAAAACATGAATTTTCCTCTCCATTTTACAACAATTCTCTGTTTGTTTATTCTCAAGTTTTCATCAAACACAGTTCTTGGATCAAACTGTACCCATTCATGTGGAAACAGATTCCTTCCATTTCCTTTTGGTTTCTCCCATGGCTGCCCAATTCAGCTTAACTGTACCTCAAATGAAGAAATTTTCATGAAAGATTTCCCAGTTCAATCAGTAACTTCAGATACCATTTTAATCAATCTTTTAGCAAAATGCAGCCGACCATTTTCAGCAATTCACAATCTTTTTAGCCCAAATTACGCACCCACTTCAAAAAACGGTATACTTTTCCAGAATTGCAGTTCTTCACAGTCTAGCTGTTTGATTCCATCTACGATGATACAAACCCATTTTGACATTCTTGATTGTGGTAAAGAAAACATGAGCTGTTATTCTGAGCCGAATAGTGAGAACAATTTCATCAATTTGAAGAATTTGTCGAAAACAGGGTGTGGCTCTCTGTTTTCTGCAATTTCTGTGGAGTCGACGGTGAATAGCTCGGCTGTTTCGTTGGATGTTCAGATGGTTCAATTGGG</gDNA_template>
            <first_frame> F  T  C  P  Q  K  H  E  F  S  S  P  F  Y  N  N  S  L  F  V  Y  S  Q  V  F  I  K  H  S  S  W  I  K  L  Y  P  F  M  W  K  Q  I  P  S  I  S  F  W  F  L  P  W  L  P  N  S  A  *  L  Y  L  K  *  R  N  F  H  E  R  F  P  S  S  I  S  N  F  R  Y  H  F  N  Q  S  F  S  K  M  Q  P  T  I  F  S  N  S  Q  S  F  *  P  K  L  R  T  H  F  K  K  R  Y  T  F  P  E  L  Q  F  F  T  V  *  L  F  D  S  I  Y  D  D  T  N  P  F  *  H  S  *  L  W  *  R  K  H  E  L  L  F  *  A  E  *  *  E  Q  F  H  Q  F  E  E  F  V  E  N  R  V  W  L  S  V  F  C  N  F  C  G  V  D  G  E  *  L  G  C  F  V  G  C  S  D  G  S  I  G </first_frame>
            <second_frame>  S  H  V  L  K  N  M  N  F  P  L  H  F  T  T  I  L  C  L  F  I  L  K  F  S  S  N  T  V  L  G  S  N  C  T  H  S  C  G  N  R  F  L  P  F  P  F  G  F  S  H  G  C  P  I  Q  L  N  C  T  S  N  E  E  I  F  M  K  D  F  P  V  Q  S  V  T  S  D  T  I  L  I  N  L  L  A  K  C  S  R  P  F  S  A  I  H  N  L  F  S  P  N  Y  A  P  T  S  K  N  G  I  L  F  Q  N  C  S  S  S  Q  S  S  C  L  I  P  S  T  M  I  Q  T  H  F  D  I  L  D  C  G  K  E  N  M  S  C  Y  S  E  P  N  S  E  N  N  F  I  N  L  K  N  L  S  K  T  G  C  G  S  L  F  S  A  I  S  V  E  S  T  V  N  S  S  A  V  S  L  D  V  Q  M  V  Q  L   </second_frame>
            <third_frame>   H  M  S  S  K  T  *  I  F  L  S  I  L  Q  Q  F  S  V  C  L  F  S  S  F  H  Q  T  Q  F  L  D  Q  T  V  P  I  H  V  E  T  D  S  F  H  F  L  L  V  S  P  M  A  A  Q  F  S  L  T  V  P  Q  M  K  K  F  S  *  K  I  S  Q  F  N  Q  *  L  Q  I  P  F  *  S  I  F  *  Q  N  A  A  D  H  F  Q  Q  F  T  I  F  L  A  Q  I  T  H  P  L  Q  K  T  V  Y  F  S  R  I  A  V  L  H  S  L  A  V  *  F  H  L  R  *  Y  K  P  I  L  T  F  L  I  V  V  K  K  T  *  A  V  I  L  S  R  I  V  R  T  I  S  S  I  *  R  I  C  R  K  Q  G  V  A  L  C  F  L  Q  F  L  W  S  R  R  *  I  A  R  L  F  R  W  M  F  R  W  F  N  W  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0223O22.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="74629" stop="74048"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>582</number_coding_nucleotides>
                  <number_encoded_amino_acids>194</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SHVLKNMNFPLHFTTILCLFILKFSSNTVLGSNCTHSCGNRFLPFPFGFSHGCPIQLNCTSNEEIFMKDFPVQSVTSDTILINLLAKCSRPFSAIHNLFSPNYAPTSKNGILFQNCSSSQSSCLIPSTMIQTHFDILDCGKENMSCYSEPNSENNFINLKNLSKTGCGSLFSAISVESTVNSSAVSLDVQMVQL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="95574" PGL_stop="96711"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="95574" e_stop="96321"/>
            <exon e_start="96571" e_stop="96711"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.997" e_score="0.959"/>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.959">
            <gDNA_exon_boundary e_start="95574" e_stop="96321" e_length="748"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.997">
            <gDNA_intron_boundary i_start="96322" i_stop="96570" i_length="249"/>
          </intron>
          <exon e_serial="2" e_score="0.986">
            <gDNA_exon_boundary e_start="96571" e_stop="96711" e_length="141"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95574" stop="96321"/>
              <exon start="96571" stop="96711"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U326252" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CATTCCTCCTTCACTTCAACAATTTTCTCCTCATCTCCATTTTTCTCCCTTTGCTTTTTCTCTCTCATTCTCCTTTTGTCCAAAAAAATTTGAATTTATAACCAAAAAAAAAAGGCAATAAAATTACTAGTTTAACCTCAAATGTTAGTTGAAACTTGTCCCTATAGTAACAACTAATTTAATTTTGTATACCAACATTTTTCTAAACATCATGGTACACTCCATGCCCAACATGTCGTCAATTGCTGTGATGGACGACGATGATTTTGACGTCCGTCACAGCAGTTTCTCGGCTTATGACCCGAATCGCCTTAGTGAAGACGGGTCACCTCCCATGTTGTCTCCATGGAACCAAACTTGTTCCCCTTTTACTAAATCCTCTTGGCATAACTTGGATGATAATTTTCCAAAAAATTTGCCACAAAATGGACTCATTGGTTCCCTTGTTCGTGAAGAAGGACATATTTATTCTTTAGCTGCAAAGAATGATATTCTTTATACTGGTTCCGATAGCAAAAACATACGTGTTTGGAAAGATATGAAGGAATTTTCAGCTTTTAAATCAAATAGCGGTCTTGTTAAAGCTATTATCATCGCTGGAGAGAAGATATTCACCGGTCATCAAGATGGAAAAGTTCGAGTTTGGAAGGTTCAATCCAAACACCCTAACAACCATAAACGTGCTGGGAGTTTGCCAAAACTCATGGACCTTTTCAAGGCTTCCATTAAACCTAGCAACTACGTAGAG : GTAAAACGTAATCGGACCACTCTTTGGATTAAGCATTGTGACGCAATTTCATGTTTAAGCATGGACCATAGTGAAGGCCTACTCTACTCAGCTTCATGGGATAGAACATTTAAAGTATGGAAAGTTGATAAATCCAAATGT</gDNA_template>
            <first_frame> H  S  S  F  T  S  T  I  F  S  S  S  P  F  F  S  L  C  F  F  S  L  I  L  L  L  S  K  K  I  *  I  Y  N  Q  K  K  K  A  I  K  L  L  V  *  P  Q  M  L  V  E  T  C  P  Y  S  N  N  *  F  N  F  V  Y  Q  H  F  S  K  H  H  G  T  L  H  A  Q  H  V  V  N  C  C  D  G  R  R  *  F  *  R  P  S  Q  Q  F  L  G  L  *  P  E  S  P  *  *  R  R  V  T  S  H  V  V  S  M  E  P  N  L  F  P  F  Y  *  I  L  L  A  *  L  G  *  *  F  S  K  K  F  A  T  K  W  T  H  W  F  P  C  S  *  R  R  T  Y  L  F  F  S  C  K  E  *  Y  S  L  Y  W  F  R  *  Q  K  H  T  C  L  E  R  Y  E  G  I  F  S  F  *  I  K  *  R  S  C  *  S  Y  Y  H  R  W  R  E  D  I  H  R  S  S  R  W  K  S  S  S  L  E  G  S  I  Q  T  P  *  Q  P  *  T  C  W  E  F  A  K  T  H  G  P  F  Q  G  F  H  *  T  *  Q  L  R  R   : G  K  T  *  S  D  H  S  L  D  *  A  L  *  R  N  F  M  F  K  H  G  P  *  *  R  P  T  L  L  S  F  M  G  *  N  I  *  S  M  E  S  *  *  I  Q  M  </first_frame>
            <second_frame>  I  P  P  S  L  Q  Q  F  S  P  H  L  H  F  S  P  F  A  F  S  L  S  F  S  F  C  P  K  K  F  E  F  I  T  K  K  K  R  Q  *  N  Y  *  F  N  L  K  C  *  L  K  L  V  P  I  V  T  T  N  L  I  L  Y  T  N  I  F  L  N  I  M  V  H  S  M  P  N  M  S  S  I  A  V  M  D  D  D  D  F  D  V  R  H  S  S  F  S  A  Y  D  P  N  R  L  S  E  D  G  S  P  P  M  L  S  P  W  N  Q  T  C  S  P  F  T  K  S  S  W  H  N  L  D  D  N  F  P  K  N  L  P  Q  N  G  L  I  G  S  L  V  R  E  E  G  H  I  Y  S  L  A  A  K  N  D  I  L  Y  T  G  S  D  S  K  N  I  R  V  W  K  D  M  K  E  F  S  A  F  K  S  N  S  G  L  V  K  A  I  I  I  A  G  E  K  I  F  T  G  H  Q  D  G  K  V  R  V  W  K  V  Q  S  K  H  P  N  N  H  K  R  A  G  S  L  P  K  L  M  D  L  F  K  A  S  I  K  P  S  N  Y  V  E  :  V  K  R  N  R  T  T  L  W  I  K  H  C  D  A  I  S  C  L  S  M  D  H  S  E  G  L  L  Y  S  A  S  W  D  R  T  F  K  V  W  K  V  D  K  S  K  C </second_frame>
            <third_frame>   F  L  L  H  F  N  N  F  L  L  I  S  I  F  L  P  L  L  F  L  S  H  S  P  F  V  Q  K  N  L  N  L  *  P  K  K  K  G  N  K  I  T  S  L  T  S  N  V  S  *  N  L  S  L  *  *  Q  L  I  *  F  C  I  P  T  F  F  *  T  S  W  Y  T  P  C  P  T  C  R  Q  L  L  *  W  T  T  M  I  L  T  S  V  T  A  V  S  R  L  M  T  R  I  A  L  V  K  T  G  H  L  P  C  C  L  H  G  T  K  L  V  P  L  L  L  N  P  L  G  I  T  W  M  I  I  F  Q  K  I  C  H  K  M  D  S  L  V  P  L  F  V  K  K  D  I  F  I  L  *  L  Q  R  M  I  F  F  I  L  V  P  I  A  K  T  Y  V  F  G  K  I  *  R  N  F  Q  L  L  N  Q  I  A  V  L  L  K  L  L  S  S  L  E  R  R  Y  S  P  V  I  K  M  E  K  F  E  F  G  R  F  N  P  N  T  L  T  T  I  N  V  L  G  V  C  Q  N  S  W  T  F  S  R  L  P  L  N  L  A  T  T  *  R :   *  N  V  I  G  P  L  F  G  L  S  I  V  T  Q  F  H  V  *  A  W  T  I  V  K  A  Y  S  T  Q  L  H  G  I  E  H  L  K  Y  G  K  L  I  N  P  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0223O22.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="95722" stop="96321"/>
                    <exon start="96571" stop="96711"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>741</number_coding_nucleotides>
                  <number_encoded_amino_acids>247</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LKLVPIVTTNLILYTNIFLNIMVHSMPNMSSIAVMDDDDFDVRHSSFSAYDPNRLSEDGSPPMLSPWNQTCSPFTKSSWHNLDDNFPKNLPQNGLIGSLVREEGHIYSLAAKNDILYTGSDSKNIRVWKDMKEFSAFKSNSGLVKAIIIAGEKIFTGHQDGKVRVWKVQSKHPNNHKRAGSLPKLMDLFKASIKPSNYVEVKRNRTTLWIKHCDAISCLSMDHSEGLLYSASWDRTFKVWKVDKSKC</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="123327" PGL_stop="107495"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="123327" e_stop="123037"/>
            <exon e_start="109163" e_stop="108309"/>
            <exon e_start="108224" e_stop="107781"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.982" e_score="0.997"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="0.988"/>
          <exon-only e_score="0.984"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="123327" e_stop="123037" e_length="291"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.982">
            <gDNA_intron_boundary i_start="123036" i_stop="109164" i_length="13873"/>
          </intron>
          <exon e_serial="2" e_score="0.988">
            <gDNA_exon_boundary e_start="109163" e_stop="108309" e_length="855"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="108308" i_stop="108225" i_length="84"/>
          </intron>
          <exon e_serial="3" e_score="0.984">
            <gDNA_exon_boundary e_start="108224" e_stop="107781" e_length="444"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="123327" stop="123037"/>
              <exon start="109163" stop="108309"/>
              <exon start="108224" stop="107781"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U318036" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTCCCAAAAATAGGAGAGGATCCACAGTAACTGTCTTTTCCACACCAAAAAGTTATGTCAACGCTTTCGTATACAAATTCATATTTACGATTCATGCGTCTAAGTTTTCATAAAAATAAACAAGGTAAGAGTGTTATCACTTACCCCAATCTCTCTACATAAATTTCAAGTGTCTCACATCGAAGAGGACGACTGATAAATTTTATTAGCAATGGATCCCTTTCTAATTGCTGTTACATTAGCTACCTCCTTTTTTCTAATTTTCTTTCTTCAGAAACAATTTTACTCAG : TTAAAAAGCAGAGTAGTAGTAGTAGAAAGGTACCTGAAGCTGGCGGAGCATGGCCTATTATCGGCCATCTCCACCTTCTCGGTGGATCTGAATCTGATCACTTGCCTCACAAAATGTTGGGCCGCTTGGCAGATAAGTACGGGCCTATTTTCGGAATGAAGCTTGGAGTTCATCAGGTTGTAGTTGTGAGTGATCACAAATTAGCAAAGGAGTGCTTCACAACTAACGATTTAGCCCTAGCAGGTCGGCCTAAATCAATGGCTTCAGAGATTATAGGCTACAAACATGCTATGTTTGGACTTTGTTCTTACGGTCCGTACTGGAGAGAAACAAGGAAAATTGCCACAATTGAACTTTTCTCCGCTCGACGAATCGAGATGCTCAAACACATCAGAGAATTTGAGGTAAAATCAGGTATTAAAGAGATTTATAATAATTGGGAGAAGAATAATTTAAATGGTGTTGTGAAGATGGAGATGAAGGAATGGATTGGGGATTTATTTATGAACACTATGGGGAAAATATTATTCGGAAAAGGGCGAAGGAGTAACGAGGACGAAGGAATAAATAAAGCTCACAAAGCAATTCGAAGATTTTTCGAATTGTTAGGAGTTTTTGTTGTGGCTGATTTTTTACCTTATTTAAGATGGCTGGACATTGGAGGCCATGAGAAAGCGATGAAGGAGGTTTCTAAAGAAATGGACTCTGTTGTTGAAGAATGGTTAACAGAGCACAAAACGAAGAGAGGAATTATTAAATCTGGTGAAGAAGAAGATTTCATGGATGTAATGCTTTCCGTTTGTGAAGACAGAGATCTACCTGGAGTTGATGCCGATACCGCTATCAAAGCTACAT : GCTCTGCTATCGGCAGGCACAGACACAACGATGGTAACTCTAACATGGATTTTATCTCTACTACTCAACAACTATCAATCACTTCAAAAGGCTCAAGATGAGCTAGACGCTCATGTTGGCAAGAATAGATGGGTCCAAGAATCCGATATAAAAAACTTAGTTTATTTTCAAGCTATTGTTAAAGAAGCATTACGTTTATATCCAGCTGGACCGCTCTCTTTACCACACGAGTCGATGGAGGATTGTACTATCAGTGGGTATGATATACCAAAAGGCACTCGCTTATTAGTGAACATATGGAAGATTCAGCGCGATCCTAATATATGGCCAAATCCTCACGAGTTTAAGCCAGAGAGGTTCTTGTCGACCCACAAGGATGTCGATGTAAAGGGCAATCACTTTGAGTTAATGCCATTTGGTAGTGGAAGAAGAATGTGCCCTGGA</gDNA_template>
            <first_frame> S  P  K  N  R  R  G  S  T  V  T  V  F  S  T  P  K  S  Y  V  N  A  F  V  Y  K  F  I  F  T  I  H  A  S  K  F  S  *  K  *  T  R  *  E  C  Y  H  L  P  Q  S  L  Y  I  N  F  K  C  L  T  S  K  R  T  T  D  K  F  Y  *  Q  W  I  P  F  *  L  L  L  H  *  L  P  P  F  F  *  F  S  F  F  R  N  N  F  T  Q  :  L  K  S  R  V  V  V  V  E  R  Y  L  K  L  A  E  H  G  L  L  S  A  I  S  T  F  S  V  D  L  N  L  I  T  C  L  T  K  C  W  A  A  W  Q  I  S  T  G  L  F  S  E  *  S  L  E  F  I  R  L  *  L  *  V  I  T  N  *  Q  R  S  A  S  Q  L  T  I  *  P  *  Q  V  G  L  N  Q  W  L  Q  R  L  *  A  T  N  M  L  C  L  D  F  V  L  T  V  R  T  G  E  K  Q  G  K  L  P  Q  L  N  F  S  P  L  D  E  S  R  C  S  N  T  S  E  N  L  R  *  N  Q  V  L  K  R  F  I  I  I  G  R  R  I  I  *  M  V  L  *  R  W  R  *  R  N  G  L  G  I  Y  L  *  T  L  W  G  K  Y  Y  S  E  K  G  E  G  V  T  R  T  K  E  *  I  K  L  T  K  Q  F  E  D  F  S  N  C  *  E  F  L  L  W  L  I  F  Y  L  I  *  D  G  W  T  L  E  A  M  R  K  R  *  R  R  F  L  K  K  W  T  L  L  L  K  N  G  *  Q  S  T  K  R  R  E  E  L  L  N  L  V  K  K  K  I  S  W  M  *  C  F  P  F  V  K  T  E  I  Y  L  E  L  M  P  I  P  L  S  K  L  H  :  A  L  L  S  A  G  T  D  T  T  M  V  T  L  T  W  I  L  S  L  L  L  N  N  Y  Q  S  L  Q  K  A  Q  D  E  L  D  A  H  V  G  K  N  R  W  V  Q  E  S  D  I  K  N  L  V  Y  F  Q  A  I  V  K  E  A  L  R  L  Y  P  A  G  P  L  S  L  P  H  E  S  M  E  D  C  T  I  S  G  Y  D  I  P  K  G  T  R  L  L  V  N  I  W  K  I  Q  R  D  P  N  I  W  P  N  P  H  E  F  K  P  E  R  F  L  S  T  H  K  D  V  D  V  K  G  N  H  F  E  L  M  P  F  G  S  G  R  R  M  C  P  G </first_frame>
            <second_frame>  L  P  K  I  G  E  D  P  Q  *  L  S  F  P  H  Q  K  V  M  S  T  L  S  Y  T  N  S  Y  L  R  F  M  R  L  S  F  H  K  N  K  Q  G  K  S  V  I  T  Y  P  N  L  S  T  *  I  S  S  V  S  H  R  R  G  R  L  I  N  F  I  S  N  G  S  L  S  N  C  C  Y  I  S  Y  L  L  F  S  N  F  L  S  S  E  T  I  L  L  S :   *  K  A  E  *  *  *  *  K  G  T  *  S  W  R  S  M  A  Y  Y  R  P  S  P  P  S  R  W  I  *  I  *  S  L  A  S  Q  N  V  G  P  L  G  R  *  V  R  A  Y  F  R  N  E  A  W  S  S  S  G  C  S  C  E  *  S  Q  I  S  K  G  V  L  H  N  *  R  F  S  P  S  R  S  A  *  I  N  G  F  R  D  Y  R  L  Q  T  C  Y  V  W  T  L  F  L  R  S  V  L  E  R  N  K  E  N  C  H  N  *  T  F  L  R  S  T  N  R  D  A  Q  T  H  Q  R  I  *  G  K  I  R  Y  *  R  D  L  *  *  L  G  E  E  *  F  K  W  C  C  E  D  G  D  E  G  M  D  W  G  F  I  Y  E  H  Y  G  E  N  I  I  R  K  R  A  K  E  *  R  G  R  R  N  K  *  S  S  Q  S  N  S  K  I  F  R  I  V  R  S  F  C  C  G  *  F  F  T  L  F  K  M  A  G  H  W  R  P  *  E  S  D  E  G  G  F  *  R  N  G  L  C  C  *  R  M  V  N  R  A  Q  N  E  E  R  N  Y  *  I  W  *  R  R  R  F  H  G  C  N  A  F  R  L  *  R  Q  R  S  T  W  S  *  C  R  Y  R  Y  Q  S  Y  M :   L  C  Y  R  Q  A  Q  T  Q  R  W  *  L  *  H  G  F  Y  L  Y  Y  S  T  T  I  N  H  F  K  R  L  K  M  S  *  T  L  M  L  A  R  I  D  G  S  K  N  P  I  *  K  T  *  F  I  F  K  L  L  L  K  K  H  Y  V  Y  I  Q  L  D  R  S  L  Y  H  T  S  R  W  R  I  V  L  S  V  G  M  I  Y  Q  K  A  L  A  Y  *  *  T  Y  G  R  F  S  A  I  L  I  Y  G  Q  I  L  T  S  L  S  Q  R  G  S  C  R  P  T  R  M  S  M  *  R  A  I  T  L  S  *  C  H  L  V  V  E  E  E  C  A  L   </second_frame>
            <third_frame>   S  Q  K  *  E  R  I  H  S  N  C  L  F  H  T  K  K  L  C  Q  R  F  R  I  Q  I  H  I  Y  D  S  C  V  *  V  F  I  K  I  N  K  V  R  V  L  S  L  T  P  I  S  L  H  K  F  Q  V  S  H  I  E  E  D  D  *  *  I  L  L  A  M  D  P  F  L  I  A  V  T  L  A  T  S  F  F  L  I  F  F  L  Q  K  Q  F  Y  S   : V  K  K  Q  S  S  S  S  R  K  V  P  E  A  G  G  A  W  P  I  I  G  H  L  H  L  L  G  G  S  E  S  D  H  L  P  H  K  M  L  G  R  L  A  D  K  Y  G  P  I  F  G  M  K  L  G  V  H  Q  V  V  V  V  S  D  H  K  L  A  K  E  C  F  T  T  N  D  L  A  L  A  G  R  P  K  S  M  A  S  E  I  I  G  Y  K  H  A  M  F  G  L  C  S  Y  G  P  Y  W  R  E  T  R  K  I  A  T  I  E  L  F  S  A  R  R  I  E  M  L  K  H  I  R  E  F  E  V  K  S  G  I  K  E  I  Y  N  N  W  E  K  N  N  L  N  G  V  V  K  M  E  M  K  E  W  I  G  D  L  F  M  N  T  M  G  K  I  L  F  G  K  G  R  R  S  N  E  D  E  G  I  N  K  A  H  K  A  I  R  R  F  F  E  L  L  G  V  F  V  V  A  D  F  L  P  Y  L  R  W  L  D  I  G  G  H  E  K  A  M  K  E  V  S  K  E  M  D  S  V  V  E  E  W  L  T  E  H  K  T  K  R  G  I  I  K  S  G  E  E  E  D  F  M  D  V  M  L  S  V  C  E  D  R  D  L  P  G  V  D  A  D  T  A  I  K  A  T   : C  S  A  I  G  R  H  R  H  N  D  G  N  S  N  M  D  F  I  S  T  T  Q  Q  L  S  I  T  S  K  G  S  R  *  A  R  R  S  C  W  Q  E  *  M  G  P  R  I  R  Y  K  K  L  S  L  F  S  S  Y  C  *  R  S  I  T  F  I  S  S  W  T  A  L  F  T  T  R  V  D  G  G  L  Y  Y  Q  W  V  *  Y  T  K  R  H  S  L  I  S  E  H  M  E  D  S  A  R  S  *  Y  M  A  K  S  S  R  V  *  A  R  E  V  L  V  D  P  Q  G  C  R  C  K  G  Q  S  L  *  V  N  A  I  W  *  W  K  K  N  V  P  W  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0223O22.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="123127" stop="123037"/>
                    <exon start="109163" stop="108309"/>
                    <exon start="108224" stop="108124"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1044</number_coding_nucleotides>
                  <number_encoded_amino_acids>348</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ILLAMDPFLIAVTLATSFFLIFFLQKQFYSVKKQSSSSRKVPEAGGAWPIIGHLHLLGGSESDHLPHKMLGRLADKYGPIFGMKLGVHQVVVVSDHKLAKECFTTNDLALAGRPKSMASEIIGYKHAMFGLCSYGPYWRETRKIATIELFSARRIEMLKHIREFEVKSGIKEIYNNWEKNNLNGVVKMEMKEWIGDLFMNTMGKILFGKGRRSNEDEGINKAHKAIRRFFELLGVFVVADFLPYLRWLDIGGHEKAMKEVSKEMDSVVEEWLTEHKTKRGIIKSGEEEDFMDVMLSVCEDRDLPGVDADTAIKATCSAIGRHRHNDGNSNMDFISTTQQLSITSKGSR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="109152" e_stop="108304"/>
            <exon e_start="108224" e_stop="107495"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="0.932"/>
          <exon-only e_score="0.916"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.932">
            <gDNA_exon_boundary e_start="109152" e_stop="108304" e_length="849"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="108303" i_stop="108225" i_length="79"/>
          </intron>
          <exon e_serial="2" e_score="0.916">
            <gDNA_exon_boundary e_start="108224" e_stop="107495" e_length="730"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="109152" stop="108304"/>
              <exon start="108224" stop="107495"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U318035" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGTAGTAGTAGTAGAAAGGTACCTGAAGCTGGCGGAGCATGGCCTATTATCGGCCATCTCCACCTTCTCGGTGGATCTGAATCTGATCACTTGCCTCACAAAATGTTGGGCCGCTTGGCAGATAAGTACGGGCCTATTTTCGGAATGAAGCTTGGAGTTCATCAGGTTGTAGTTGTGAGTGATCACAAATTAGCAAAGGAGTGCTTCACAACTAACGATTTAGCCCTAGCAGGTCGGCCTAAATCAATGGCTTCAGAGATTATAGGCTACAAACATGCTATGTTTGGACTTTGTTCTTACGGTCCGTACTGGAGAGAAACAAGGAAAATTGCCACAATTGAACTTTTCTCCGCTCGACGAATCGAGATGCTCAAACACATCAGAGAATTTGAGGTAAAATCAGGTATTAAAGAGATTTATAATAATTGGGAGAAGAATAATTTAAATGGTGTTGTGAAGATGGAGATGAAGGAATGGATTGGGGATTTATTTATGAACACTATGGGGAAAATATTATTCGGAAAAGGGCGAAGGAGTAACGAGGACGAAGGAATAAATAAAGCTCACAAAGCAATTCGAAGATTTTTCGAATTGTTAGGAGTTTTTGTTGTGGCTGATTTTTTACCTTATTTAAGATGGCTGGACATTGGAGGCCATGAGAAAGCGATGAAGGAGGTTTCTAAAGAAATGGACTCTGTTGTTGAAGAATGGTTAACAGAGCACAAAACGAAGAGAGGAATTATTAAATCTGGTGAAGAAGAAGATTTCATGGATGTAATGCTTTCCGTTTGTGAAGACAGAGATCTACCTGGAGTTGATGCCGATACCGCTATCAAAGCTACATGTATG : GCTCTGCTATCGGCAGGCACAGACACAACGATGGTAACTCTAACATGGATTTTATCTCTACTACTCAACAACTATCAATCACTTCAAAAGGCTCAAGATGAGCTAGACGCTCATGTTGGCAAGAATAGATGGGTCCAAGAATCCGATATAAAAAACTTAGTTTATTTTCAAGCTATTGTTAAAGAAGCATTACGTTTATATCCAGCTGGACCGCTCTCTTTACCACACGAGTCGATGGAGGATTGTACTATCAGTGGGTATGATATACCAAAAGGCACTCGCTTATTAGTGAACATATGGAAGATTCAGCGCGATCCTAATATATGGCCAAATCCTCACGAGTTTAAGCCAGAGAGGTTCTTGTCGACCCACAAGGATGTCGATGTAAAGGGCAATCACTTTGAGTTAATGCCATTTGGTAGTGGAAGAAGAATGTGCCCTGGAATTTCGTTGGCCCTTCAAGTTTTGCCCTTTGTAATAGCAATGTTGCTGCAGGGGTTTGACATGAAGAGGCTTTTGGATGAACCGATTGATATGAGTGAGAGCTTTGGATTGACCGTACTCAAAGCTTCTCCACTCGAAGTTCTCCTTGCTCCGCGCTTGGCTCCCGATCTTTATGAATGAAATGATAGACAAAATTTGTGCCTCATGCCACTGTTGTTTACTACTAGTTTGTAATATTGTAATGCAAATAATAACAAAACTTCAAAATTCCTACATTTGAAATGTG</gDNA_template>
            <first_frame> S  S  S  S  R  K  V  P  E  A  G  G  A  W  P  I  I  G  H  L  H  L  L  G  G  S  E  S  D  H  L  P  H  K  M  L  G  R  L  A  D  K  Y  G  P  I  F  G  M  K  L  G  V  H  Q  V  V  V  V  S  D  H  K  L  A  K  E  C  F  T  T  N  D  L  A  L  A  G  R  P  K  S  M  A  S  E  I  I  G  Y  K  H  A  M  F  G  L  C  S  Y  G  P  Y  W  R  E  T  R  K  I  A  T  I  E  L  F  S  A  R  R  I  E  M  L  K  H  I  R  E  F  E  V  K  S  G  I  K  E  I  Y  N  N  W  E  K  N  N  L  N  G  V  V  K  M  E  M  K  E  W  I  G  D  L  F  M  N  T  M  G  K  I  L  F  G  K  G  R  R  S  N  E  D  E  G  I  N  K  A  H  K  A  I  R  R  F  F  E  L  L  G  V  F  V  V  A  D  F  L  P  Y  L  R  W  L  D  I  G  G  H  E  K  A  M  K  E  V  S  K  E  M  D  S  V  V  E  E  W  L  T  E  H  K  T  K  R  G  I  I  K  S  G  E  E  E  D  F  M  D  V  M  L  S  V  C  E  D  R  D  L  P  G  V  D  A  D  T  A  I  K  A  T  C  M  :  A  L  L  S  A  G  T  D  T  T  M  V  T  L  T  W  I  L  S  L  L  L  N  N  Y  Q  S  L  Q  K  A  Q  D  E  L  D  A  H  V  G  K  N  R  W  V  Q  E  S  D  I  K  N  L  V  Y  F  Q  A  I  V  K  E  A  L  R  L  Y  P  A  G  P  L  S  L  P  H  E  S  M  E  D  C  T  I  S  G  Y  D  I  P  K  G  T  R  L  L  V  N  I  W  K  I  Q  R  D  P  N  I  W  P  N  P  H  E  F  K  P  E  R  F  L  S  T  H  K  D  V  D  V  K  G  N  H  F  E  L  M  P  F  G  S  G  R  R  M  C  P  G  I  S  L  A  L  Q  V  L  P  F  V  I  A  M  L  L  Q  G  F  D  M  K  R  L  L  D  E  P  I  D  M  S  E  S  F  G  L  T  V  L  K  A  S  P  L  E  V  L  L  A  P  R  L  A  P  D  L  Y  E  *  N  D  R  Q  N  L  C  L  M  P  L  L  F  T  T  S  L  *  Y  C  N  A  N  N  N  K  T  S  K  F  L  H  L  K  C  </first_frame>
            <second_frame>  V  V  V  V  E  R  Y  L  K  L  A  E  H  G  L  L  S  A  I  S  T  F  S  V  D  L  N  L  I  T  C  L  T  K  C  W  A  A  W  Q  I  S  T  G  L  F  S  E  *  S  L  E  F  I  R  L  *  L  *  V  I  T  N  *  Q  R  S  A  S  Q  L  T  I  *  P  *  Q  V  G  L  N  Q  W  L  Q  R  L  *  A  T  N  M  L  C  L  D  F  V  L  T  V  R  T  G  E  K  Q  G  K  L  P  Q  L  N  F  S  P  L  D  E  S  R  C  S  N  T  S  E  N  L  R  *  N  Q  V  L  K  R  F  I  I  I  G  R  R  I  I  *  M  V  L  *  R  W  R  *  R  N  G  L  G  I  Y  L  *  T  L  W  G  K  Y  Y  S  E  K  G  E  G  V  T  R  T  K  E  *  I  K  L  T  K  Q  F  E  D  F  S  N  C  *  E  F  L  L  W  L  I  F  Y  L  I  *  D  G  W  T  L  E  A  M  R  K  R  *  R  R  F  L  K  K  W  T  L  L  L  K  N  G  *  Q  S  T  K  R  R  E  E  L  L  N  L  V  K  K  K  I  S  W  M  *  C  F  P  F  V  K  T  E  I  Y  L  E  L  M  P  I  P  L  S  K  L  H  V  W :   L  C  Y  R  Q  A  Q  T  Q  R  W  *  L  *  H  G  F  Y  L  Y  Y  S  T  T  I  N  H  F  K  R  L  K  M  S  *  T  L  M  L  A  R  I  D  G  S  K  N  P  I  *  K  T  *  F  I  F  K  L  L  L  K  K  H  Y  V  Y  I  Q  L  D  R  S  L  Y  H  T  S  R  W  R  I  V  L  S  V  G  M  I  Y  Q  K  A  L  A  Y  *  *  T  Y  G  R  F  S  A  I  L  I  Y  G  Q  I  L  T  S  L  S  Q  R  G  S  C  R  P  T  R  M  S  M  *  R  A  I  T  L  S  *  C  H  L  V  V  E  E  E  C  A  L  E  F  R  W  P  F  K  F  C  P  L  *  *  Q  C  C  C  R  G  L  T  *  R  G  F  W  M  N  R  L  I  *  V  R  A  L  D  *  P  Y  S  K  L  L  H  S  K  F  S  L  L  R  A  W  L  P  I  F  M  N  E  M  I  D  K  I  C  A  S  C  H  C  C  L  L  L  V  C  N  I  V  M  Q  I  I  T  K  L  Q  N  S  Y  I  *  N  V </second_frame>
            <third_frame>   *  *  *  *  K  G  T  *  S  W  R  S  M  A  Y  Y  R  P  S  P  P  S  R  W  I  *  I  *  S  L  A  S  Q  N  V  G  P  L  G  R  *  V  R  A  Y  F  R  N  E  A  W  S  S  S  G  C  S  C  E  *  S  Q  I  S  K  G  V  L  H  N  *  R  F  S  P  S  R  S  A  *  I  N  G  F  R  D  Y  R  L  Q  T  C  Y  V  W  T  L  F  L  R  S  V  L  E  R  N  K  E  N  C  H  N  *  T  F  L  R  S  T  N  R  D  A  Q  T  H  Q  R  I  *  G  K  I  R  Y  *  R  D  L  *  *  L  G  E  E  *  F  K  W  C  C  E  D  G  D  E  G  M  D  W  G  F  I  Y  E  H  Y  G  E  N  I  I  R  K  R  A  K  E  *  R  G  R  R  N  K  *  S  S  Q  S  N  S  K  I  F  R  I  V  R  S  F  C  C  G  *  F  F  T  L  F  K  M  A  G  H  W  R  P  *  E  S  D  E  G  G  F  *  R  N  G  L  C  C  *  R  M  V  N  R  A  Q  N  E  E  R  N  Y  *  I  W  *  R  R  R  F  H  G  C  N  A  F  R  L  *  R  Q  R  S  T  W  S  *  C  R  Y  R  Y  Q  S  Y  M  Y   : G  S  A  I  G  R  H  R  H  N  D  G  N  S  N  M  D  F  I  S  T  T  Q  Q  L  S  I  T  S  K  G  S  R  *  A  R  R  S  C  W  Q  E  *  M  G  P  R  I  R  Y  K  K  L  S  L  F  S  S  Y  C  *  R  S  I  T  F  I  S  S  W  T  A  L  F  T  T  R  V  D  G  G  L  Y  Y  Q  W  V  *  Y  T  K  R  H  S  L  I  S  E  H  M  E  D  S  A  R  S  *  Y  M  A  K  S  S  R  V  *  A  R  E  V  L  V  D  P  Q  G  C  R  C  K  G  Q  S  L  *  V  N  A  I  W  *  W  K  K  N  V  P  W  N  F  V  G  P  S  S  F  A  L  C  N  S  N  V  A  A  G  V  *  H  E  E  A  F  G  *  T  D  *  Y  E  *  E  L  W  I  D  R  T  Q  S  F  S  T  R  S  S  P  C  S  A  L  G  S  R  S  L  *  M  K  *  *  T  K  F  V  P  H  A  T  V  V  Y  Y  *  F  V  I  L  *  C  K  *  *  Q  N  F  K  I  P  T  F  E  M   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0223O22.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="109152" stop="108304"/>
                    <exon start="108224" stop="107601"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1470</number_coding_nucleotides>
                  <number_encoded_amino_acids>490</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SSSSRKVPEAGGAWPIIGHLHLLGGSESDHLPHKMLGRLADKYGPIFGMKLGVHQVVVVSDHKLAKECFTTNDLALAGRPKSMASEIIGYKHAMFGLCSYGPYWRETRKIATIELFSARRIEMLKHIREFEVKSGIKEIYNNWEKNNLNGVVKMEMKEWIGDLFMNTMGKILFGKGRRSNEDEGINKAHKAIRRFFELLGVFVVADFLPYLRWLDIGGHEKAMKEVSKEMDSVVEEWLTEHKTKRGIIKSGEEEDFMDVMLSVCEDRDLPGVDADTAIKATCMALLSAGTDTTMVTLTWILSLLLNNYQSLQKAQDELDAHVGKNRWVQESDIKNLVYFQAIVKEALRLYPAGPLSLPHESMEDCTISGYDIPKGTRLLVNIWKIQRDPNIWPNPHEFKPERFLSTHKDVDVKGNHFELMPFGSGRRMCPGISLALQVLPFVIAMLLQGFDMKRLLDEPIDMSESFGLTVLKASPLEVLLAPRLAPDLYE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="116263" e_stop="115456"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="116263" e_stop="115456" e_length="808"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116263" stop="115456"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U345812" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTTCCAAGTTCCAGGGAAGGAAAATCACGTCTGCAAGTTGAAGAAGTCCTTATATGGACTTAAGCAGTCTCCAAGGCAGTGGTATAAAAGGTTTGACAGCTATATGGTGAAGTTGGGCTATACTCGGAGCTCATATGATTGTTGTGTCTACTACAATAGGCTCAATGATGATTCATTCATCTATCTGGTGCTTTATGTAGATGATATGTTGATAGCTGCAAAGAAGAAGTATGACATTCAGAAGCTGAAGGGTTTACTTAGTGCTGAGTTTGAGATGAAGGATCTGGGAGCCGCTCGGAAGATTTTAGGGATGGAGATCATTAGAGACAGAGAGAGAAGGAAACTTTTCTTGTCACAGAGAAGCTACATTCAGAAGGTCTTGGCGAGGTTTGATATGTCTTCATCTAAGCCCATTGATACCCCCAGTGCTGCCAATATCCATCTCACTGCCATGTTCGCTCCACAGTCAGAAGAAGAGAAGGAGTATATGTCACGAGTCCCTTATGCCAGTGCCGTAGGAAGTTTGATGTATGCTATGGTCTGTACAAGGCCAGATTTAGCACATGCAGTCAGTGTAGTGAGCAGATTCATGGGACAACCAGGGAGAGAACATTGGCAGGCTGTGAAGAGAATTTTCCGGTACCTTAGAGGTACATCTGACGTTGGTCTCATTTATGGAGGTAATACTCAGTGCTTGGTTACTGGCTATTCTGATTCAGACTATGCTGGAGATGTTGACACAAGAAGATCGATGACTGGCTATGTGTTTACCCTTGGAGGATCTGTCGTCAGTTGGAAGGCAACTTT</gDNA_template>
            <first_frame> V  S  K  F  Q  G  R  K  I  T  S  A  S  *  R  S  P  Y  M  D  L  S  S  L  Q  G  S  G  I  K  G  L  T  A  I  W  *  S  W  A  I  L  G  A  H  M  I  V  V  S  T  T  I  G  S  M  M  I  H  S  S  I  W  C  F  M  *  M  I  C  *  *  L  Q  R  R  S  M  T  F  R  S  *  R  V  Y  L  V  L  S  L  R  *  R  I  W  E  P  L  G  R  F  *  G  W  R  S  L  E  T  E  R  E  G  N  F  S  C  H  R  E  A  T  F  R  R  S  W  R  G  L  I  C  L  H  L  S  P  L  I  P  P  V  L  P  I  S  I  S  L  P  C  S  L  H  S  Q  K  K  R  R  S  I  C  H  E  S  L  M  P  V  P  *  E  V  *  C  M  L  W  S  V  Q  G  Q  I  *  H  M  Q  S  V  *  *  A  D  S  W  D  N  Q  G  E  N  I  G  R  L  *  R  E  F  S  G  T  L  E  V  H  L  T  L  V  S  F  M  E  V  I  L  S  A  W  L  L  A  I  L  I  Q  T  M  L  E  M  L  T  Q  E  D  R  *  L  A  M  C  L  P  L  E  D  L  S  S  V  G  R  Q  L  </first_frame>
            <second_frame>  F  P  S  S  R  E  G  K  S  R  L  Q  V  E  E  V  L  I  W  T  *  A  V  S  K  A  V  V  *  K  V  *  Q  L  Y  G  E  V  G  L  Y  S  E  L  I  *  L  L  C  L  L  Q  *  A  Q  *  *  F  I  H  L  S  G  A  L  C  R  *  Y  V  D  S  C  K  E  E  V  *  H  S  E  A  E  G  F  T  *  C  *  V  *  D  E  G  S  G  S  R  S  E  D  F  R  D  G  D  H  *  R  Q  R  E  K  E  T  F  L  V  T  E  K  L  H  S  E  G  L  G  E  V  *  Y  V  F  I  *  A  H  *  Y  P  Q  C  C  Q  Y  P  S  H  C  H  V  R  S  T  V  R  R  R  E  G  V  Y  V  T  S  P  L  C  Q  C  R  R  K  F  D  V  C  Y  G  L  Y  K  A  R  F  S  T  C  S  Q  C  S  E  Q  I  H  G  T  T  R  E  R  T  L  A  G  C  E  E  N  F  P  V  P  *  R  Y  I  *  R  W  S  H  L  W  R  *  Y  S  V  L  G  Y  W  L  F  *  F  R  L  C  W  R  C  *  H  K  K  I  D  D  W  L  C  V  Y  P  W  R  I  C  R  Q  L  E  G  N  F </second_frame>
            <third_frame>   F  Q  V  P  G  K  E  N  H  V  C  K  L  K  K  S  L  Y  G  L  K  Q  S  P  R  Q  W  Y  K  R  F  D  S  Y  M  V  K  L  G  Y  T  R  S  S  Y  D  C  C  V  Y  Y  N  R  L  N  D  D  S  F  I  Y  L  V  L  Y  V  D  D  M  L  I  A  A  K  K  K  Y  D  I  Q  K  L  K  G  L  L  S  A  E  F  E  M  K  D  L  G  A  A  R  K  I  L  G  M  E  I  I  R  D  R  E  R  R  K  L  F  L  S  Q  R  S  Y  I  Q  K  V  L  A  R  F  D  M  S  S  S  K  P  I  D  T  P  S  A  A  N  I  H  L  T  A  M  F  A  P  Q  S  E  E  E  K  E  Y  M  S  R  V  P  Y  A  S  A  V  G  S  L  M  Y  A  M  V  C  T  R  P  D  L  A  H  A  V  S  V  V  S  R  F  M  G  Q  P  G  R  E  H  W  Q  A  V  K  R  I  F  R  Y  L  R  G  T  S  D  V  G  L  I  Y  G  G  N  T  Q  C  L  V  T  G  Y  S  D  S  D  Y  A  G  D  V  D  T  R  R  S  M  T  G  Y  V  F  T  L  G  G  S  V  V  S  W  K  A  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0223O22.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="116261" stop="115458"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>804</number_coding_nucleotides>
                  <number_encoded_amino_acids>268</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FQVPGKENHVCKLKKSLYGLKQSPRQWYKRFDSYMVKLGYTRSSYDCCVYYNRLNDDSFIYLVLYVDDMLIAAKKKYDIQKLKGLLSAEFEMKDLGAARKILGMEIIRDRERRKLFLSQRSYIQKVLARFDMSSSKPIDTPSAANIHLTAMFAPQSEEEKEYMSRVPYASAVGSLMYAMVCTRPDLAHAVSVVSRFMGQPGREHWQAVKRIFRYLRGTSDVGLIYGGNTQCLVTGYSDSDYAGDVDTRRSMTGYVFTLGGSVVSWKAT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="116922" e_stop="116274"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.986">
            <gDNA_exon_boundary e_start="116922" e_stop="116274" e_length="649"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116922" stop="116274"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U330105" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TACGTCAGAAACTGGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGAGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACAAAAACTGATATTCCAGAATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGCCAAGGAGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGTTGCTGAAGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTTCTGATTCTGAAAAATGGTTTGCCGCTATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGATCTGGTCATACAGCCTTTGGGGAGAAAGATTATTACTTGCAAATGGGTTTTCAAGAAGAAGGAAGGGATATCACCAGCAGAAGGAGTCAAGTATAAAGCCAGGGTTGTTGCCAGAGGTTTCAACCAAAGAGAGGGAGTGGACTACAATGAGATCTTCTCACCAGTGGTCAGACATACTTCCATCCGAGTGTTACTAGCGATAGTTGCACATCAGAATCTGGAGCTTGAACAACTTGATGTGAAGACAGCGTTTCTACATGGAGAGTTGGAGGAAGAGATATACATGACT</gDNA_template>
            <first_frame> Y  V  R  N  W  E  S  *  Q  T  G  G  V  S  S  H  S  E  R  E  R  F  K  G  T  *  R  G  G  S  R  A  T  D  K  N  *  Y  S  R  I  Y  A  I  R  Y  P  S  E  Y  S  S  R  S  A  K  E  G  W  S  S  A  T  Y  E  V  W  F  *  G  H  G  G  L  C  T  A  G  C  *  R  G  R  Y  I  *  A  V  Y  L  Q  R  S  H  F  K  F  *  F  *  K  M  V  C  R  Y  G  R  *  D  G  V  P  T  Q  E  S  D  M  G  S  G  H  T  A  F  G  E  K  D  Y  Y  L  Q  M  G  F  Q  E  E  G  R  D  I  T  S  R  R  S  Q  V  *  S  Q  G  C  C  Q  R  F  Q  P  K  R  G  S  G  L  Q  *  D  L  L  T  S  G  Q  T  Y  F  H  P  S  V  T  S  D  S  C  T  S  E  S  G  A  *  T  T  *  C  E  D  S  V  S  T  W  R  V  G  G  R  D  I  H  D  </first_frame>
            <second_frame>  T  S  E  T  G  S  L  D  K  Q  V  E  F  Q  V  I  Q  N  E  R  D  L  K  E  P  E  E  E  D  Q  E  P  Q  T  K  T  D  I  P  E  S  M  P  S  D  I  H  Q  S  I  A  Q  D  R  P  R  R  V  G  V  R  P  P  T  R  Y  G  F  E  D  M  V  G  Y  A  L  Q  V  A  E  E  V  D  T  S  E  P  S  T  Y  K  E  A  I  L  S  S  D  S  E  K  W  F  A  A  M  G  D  E  M  E  S  L  H  K  N  Q  T  W  D  L  V  I  Q  P  L  G  R  K  I  I  T  C  K  W  V  F  K  K  K  E  G  I  S  P  A  E  G  V  K  Y  K  A  R  V  V  A  R  G  F  N  Q  R  E  G  V  D  Y  N  E  I  F  S  P  V  V  R  H  T  S  I  R  V  L  L  A  I  V  A  H  Q  N  L  E  L  E  Q  L  D  V  K  T  A  F  L  H  G  E  L  E  E  E  I  Y  M  T </second_frame>
            <third_frame>   R  Q  K  L  G  V  L  T  N  R  W  S  F  K  S  F  R  T  R  E  I  *  R  N  L  K  R  R  I  K  S  H  R  Q  K  L  I  F  Q  N  L  C  H  Q  I  S  I  R  V  *  L  K  I  G  Q  G  G  L  E  F  G  H  L  R  G  M  V  L  R  T  W  W  V  M  H  C  R  L  L  K  R  *  I  H  L  S  R  L  L  T  K  K  P  F  *  V  L  I  L  K  N  G  L  P  L  W  E  M  R  W  S  P  Y  T  R  I  R  H  G  I  W  S  Y  S  L  W  G  E  R  L  L  L  A  N  G  F  S  R  R  R  K  G  Y  H  Q  Q  K  E  S  S  I  K  P  G  L  L  P  E  V  S  T  K  E  R  E  W  T  T  M  R  S  S  H  Q  W  S  D  I  L  P  S  E  C  Y  *  R  *  L  H  I  R  I  W  S  L  N  N  L  M  *  R  Q  R  F  Y  M  E  S  W  R  K  R  Y  T  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0223O22.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="116921" stop="116274"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>648</number_coding_nucleotides>
                  <number_encoded_amino_acids>216</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TSETGSLDKQVEFQVIQNERDLKEPEEEDQEPQTKTDIPESMPSDIHQSIAQDRPRRVGVRPPTRYGFEDMVGYALQVAEEVDTSEPSTYKEAILSSDSEKWFAAMGDEMESLHKNQTWDLVIQPLGRKIITCKWVFKKKEGISPAEGVKYKARVVARGFNQREGVDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEEIYMT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="122509" e_stop="122180"/>
            <exon e_start="122104" e_stop="121982"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="0.958"/>
          <exon-only e_score="0.984"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.958">
            <gDNA_exon_boundary e_start="122509" e_stop="122180" e_length="330"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="122179" i_stop="122105" i_length="75"/>
          </intron>
          <exon e_serial="2" e_score="0.984">
            <gDNA_exon_boundary e_start="122104" e_stop="121982" e_length="123"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="122509" stop="122180"/>
              <exon start="122104" stop="121982"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U336371" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="5" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGAAAAGGGCGAAGGAGTAATGAGGACGAAGGAATAAATAAGGCTCACAAAGCAATTCGAAGATTTTTCGAATTGTTAGGAGCTTTTGTTGTGGCTGATTTTTTACCTTACTTAAGATGGCTGGACATTGGAGGCCATGAGAAAGCGATGAAGGAGGTTTCTAAAGAATTGGACTCTGTTGTTGCAGAATGGTTAACAGAGCACAAAACAAAGAGAGGAATTATTAAATCTGGTGAAGAAGAAGATTTCATGGATGTCATGCTTTCCATTTGTGAAGACAGAGATCTGCTTGGATTCGATGCCGATACCGCTATCAAAGCTACATGTATG : GCTCTGCTATCGGCAGGTACAGACACGACGATTGTAACTCTAACGTGGACTTTATCTCTACTACTCAATAACTATCAATCACTTCAAAAGGCTCAAGATGAGCTAGACGCTCATGTTGGCAAG</gDNA_template>
            <first_frame> G  K  G  R  R  S  N  E  D  E  G  I  N  K  A  H  K  A  I  R  R  F  F  E  L  L  G  A  F  V  V  A  D  F  L  P  Y  L  R  W  L  D  I  G  G  H  E  K  A  M  K  E  V  S  K  E  L  D  S  V  V  A  E  W  L  T  E  H  K  T  K  R  G  I  I  K  S  G  E  E  E  D  F  M  D  V  M  L  S  I  C  E  D  R  D  L  L  G  F  D  A  D  T  A  I  K  A  T  C  M  :  A  L  L  S  A  G  T  D  T  T  I  V  T  L  T  W  T  L  S  L  L  L  N  N  Y  Q  S  L  Q  K  A  Q  D  E  L  D  A  H  V  G  K </first_frame>
            <second_frame>  E  K  G  E  G  V  M  R  T  K  E  *  I  R  L  T  K  Q  F  E  D  F  S  N  C  *  E  L  L  L  W  L  I  F  Y  L  T  *  D  G  W  T  L  E  A  M  R  K  R  *  R  R  F  L  K  N  W  T  L  L  L  Q  N  G  *  Q  S  T  K  Q  R  E  E  L  L  N  L  V  K  K  K  I  S  W  M  S  C  F  P  F  V  K  T  E  I  C  L  D  S  M  P  I  P  L  S  K  L  H  V  W :   L  C  Y  R  Q  V  Q  T  R  R  L  *  L  *  R  G  L  Y  L  Y  Y  S  I  T  I  N  H  F  K  R  L  K  M  S  *  T  L  M  L  A   </second_frame>
            <third_frame>   K  R  A  K  E  *  *  G  R  R  N  K  *  G  S  Q  S  N  S  K  I  F  R  I  V  R  S  F  C  C  G  *  F  F  T  L  L  K  M  A  G  H  W  R  P  *  E  S  D  E  G  G  F  *  R  I  G  L  C  C  C  R  M  V  N  R  A  Q  N  K  E  R  N  Y  *  I  W  *  R  R  R  F  H  G  C  H  A  F  H  L  *  R  Q  R  S  A  W  I  R  C  R  Y  R  Y  Q  S  Y  M  Y   : G  S  A  I  G  R  Y  R  H  D  D  C  N  S  N  V  D  F  I  S  T  T  Q  *  L  S  I  T  S  K  G  S  R  *  A  R  R  S  C  W  Q  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0223O22.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="122509" stop="122180"/>
                    <exon start="122104" stop="121982"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>453</number_coding_nucleotides>
                  <number_encoded_amino_acids>151</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GKGRRSNEDEGINKAHKAIRRFFELLGAFVVADFLPYLRWLDIGGHEKAMKEVSKELDSVVAEWLTEHKTKRGIIKSGEEEDFMDVMLSICEDRDLLGFDADTAIKATCMALLSAGTDTTIVTLTWTLSLLLNNYQSLQKAQDELDAHVGK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 29 chains have been computed
$ 
$ memory statistics:
$ 47184 bytes spliced alignments in total
$ 22 spliced alignments have been stored
$ 2144 bytes was the average size of a spliced alignment
$ 23648 bytes predicted gene locations in total
$ 15 predicted gene locations have been stored
$ 1576 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 32 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-15 23:37:08
-->
