SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 31733 12.1 2.1 1.5 C04SLm0061C07.1 1 5075 (90587) C Copia00109 Copia (548) 5819 710 1 335 17.7 0.0 10.3 C04SLm0061C07.1 7369 7475 (88187) + Unknown00030 Unknown 1287 1382 (84) 2 3342 12.9 2.6 7.3 C04SLm0061C07.1 8330 9031 (86631) + Copia00110 Copia 1741 2409 (11723) 3 * 18564 9.4 2.7 4.2 C04SLm0061C07.1 8703 11671 (83991) + Unknown00020 Unknown 1 2923 (2282) 4 * 33384 4.6 1.3 1.8 C04SLm0061C07.1 9157 13719 (81943) C Unknown00059 Unknown (0) 4413 1 5 3162 13.3 5.9 6.9 C04SLm0061C07.1 13585 14279 (81383) + Copia00110 Copia 1724 2411 (11721) 6 * 2098 9.9 7.6 3.1 C04SLm0061C07.1 13977 14331 (81331) + Unknown00020 Unknown 3 373 (4832) 7 * 1944 5.4 7.2 12.7 C04SLm0061C07.1 14061 14421 (81241) C Unknown00040 Unknown (1) 4681 4341 8 * 270 13.1 0.0 0.0 C04SLm0061C07.1 15333 15393 (80269) + Gypsy00178 Gypsy 6513 6573 (2518) 9 * 2301 6.9 1.6 0.0 C04SLm0061C07.1 15375 15677 (79985) + Unknown00034 Unknown 3711 4018 (5059) 10 389 29.6 1.9 5.6 C04SLm0061C07.1 17515 17675 (77987) + Copia00089 Copia 3680 3834 (7622) 11 501 24.7 7.9 2.1 C04SLm0061C07.1 17903 18092 (77570) C Gypsy00126 Gypsy (618) 12239 12039 12 243 22.4 13.4 0.0 C04SLm0061C07.1 18094 18160 (77502) C Gypsy00055 Gypsy (198) 5628 5553 13 * 633 23.1 0.7 0.7 C04SLm0061C07.1 18153 18300 (77362) + Gypsy00092 Gypsy 2490 2637 (3576) 14 237 19.6 1.8 0.0 C04SLm0061C07.1 18383 18438 (77224) + Gypsy00009 Gypsy 1009 1065 (4923) 15 277 34.1 2.9 1.9 C04SLm0061C07.1 19805 20013 (75649) + GYPSODE1_I Unknown 1813 2023 (3119) 16 307 24.6 10.1 1.3 C04SLm0061C07.1 26182 26329 (69333) C Gypsy00066 Gypsy (5149) 7159 2796 17 312 21.1 1.3 3.8 C04SLm0061C07.1 26237 26315 (69347) + Gypsy00010 Gypsy 5283 5359 (4197) 18 671 33.6 0.8 1.1 C04SLm0061C07.1 28440 28794 (66868) + Gypsy00062 Gypsy 3492 3845 (2677) 19 * 1453 30.4 3.2 3.6 C04SLm0061C07.1 28792 29823 (65839) C Copia00205 Copia (6776) 3480 2453 20 318 28.1 2.6 0.9 C04SLm0061C07.1 30508 30622 (65040) C Gypsy00137 Gypsy (4195) 1291 1175 21 6242 21.5 4.5 3.8 C04SLm0061C07.1 30791 32997 (62665) + Unknown00029 Unknown 3372 5596 (113) 22 5200 23.9 4.1 4.9 C04SLm0061C07.1 32018 33718 (61944) C Copia00089 Copia (9768) 1688 1 23 * 14066 24.2 4.7 5.1 C04SLm0061C07.1 32648 38576 (57086) C Gypsy00155 Gypsy (290) 5823 5 24 4928 20.8 4.2 3.5 C04SLm0061C07.1 38017 39334 (56328) + Unknown00029 Unknown 3362 4689 (1020) 25 * 665 16.8 0.6 7.2 C04SLm0061C07.1 39219 39385 (56277) C Gypsy00155 Gypsy (633) 6016 5861 26 * 2092 23.9 6.9 5.7 C04SLm0061C07.1 39381 40265 (55397) C Copia00089 Copia (10029) 1427 532 27 329 16.9 1.5 1.5 C04SLm0061C07.1 40287 40352 (55310) + Gypsy00075 Gypsy 1481 1546 (176) 28 256 23.9 17.5 0.9 C04SLm0061C07.1 41331 41444 (54218) + Gypsy00062 Gypsy 459 591 (5931) 29 470 26.2 6.1 5.0 C04SLm0061C07.1 41484 41744 (53918) + Copia00089 Copia 3571 3834 (7622) 30 276 17.7 11.4 0.0 C04SLm0061C07.1 42004 42082 (53580) C Gypsy00126 Gypsy (644) 12213 12126 31 1165 8.7 3.8 1.1 C04SLm0061C07.1 44054 44239 (51423) + Gypsy00074 Gypsy 8152 8342 (5749) 32 31597 8.1 0.3 0.2 C04SLm0061C07.1 44250 48476 (47186) + Gypsy00074 Gypsy 4112 8342 (5749) 33 526 33.2 4.0 3.3 C04SLm0061C07.1 50691 51295 (44367) + Copia00144 Copia 2611 3219 (3244) 34 443 31.4 3.1 3.3 C04SLm0061C07.1 51779 51823 (43839) + ATCOPIA95_I Unknown 3258 3451 (1841) 35 608 30.9 1.5 1.9 C04SLm0061C07.1 51824 52090 (43572) C Copia00202 Copia (2666) 1358 1093 36 443 31.4 3.1 3.3 C04SLm0061C07.1 52091 52130 (43532) + ATCOPIA95_I Unknown 3452 3623 (1669) 35 308 33.3 0.6 2.5 C04SLm0061C07.1 52344 52503 (43159) C Copia00044 Copia (3409) 729 573 37 * 597 29.7 5.7 6.8 C04SLm0061C07.1 52363 52925 (42737) + TNT1_I Unknown 3396 3952 (162) 38 369 30.3 3.4 3.8 C04SLm0061C07.1 57131 57367 (38295) C PSL Unknown (0) 9932 9697 39 475 25.3 8.1 1.4 C04SLm0061C07.1 57992 58139 (37523) C PSL Unknown (1040) 8892 8735 39 605 20.8 0.0 0.0 C04SLm0061C07.1 59518 59642 (36020) C PSL Unknown (1283) 8649 8525 39 1436 28.3 0.7 3.7 C04SLm0061C07.1 59744 60282 (35380) C PSL Unknown (2112) 7820 7298 40 232 27.4 4.1 0.0 C04SLm0061C07.1 60490 60562 (35100) C PSL Unknown (2972) 6960 6885 40 27071 0.0 0.0 0.0 C04SLm0061C07.1 61131 65212 (30450) + Copia00165 Copia 1 4082 (0) 41 2587 20.8 1.2 2.7 C04SLm0061C07.1 65971 66553 (29109) C PSL Unknown (4139) 5793 5220 42 * 10568 10.7 2.5 1.7 C04SLm0061C07.1 66553 68174 (27488) + Gypsy00080 Gypsy 3352 4985 (4961) 43 2388 20.5 3.8 1.9 C04SLm0061C07.1 68157 68742 (26920) C PSL Unknown (4709) 5223 4627 42 * 3655 19.2 0.5 0.0 C04SLm0061C07.1 68742 69392 (26270) C PSL Unknown (6920) 3012 2359 42 329 21.5 6.2 7.9 C04SLm0061C07.1 76429 76605 (19057) + Gypsy00080 Gypsy 1840 2013 (7933) 44 422 23.8 4.7 7.0 C04SLm0061C07.1 76828 77048 (18614) C Gypsy00033 Gypsy (709) 7276 6867 45 1867 11.4 0.3 0.0 C04SLm0061C07.1 79310 79608 (16054) C Gypsy00193 Gypsy (11668) 1852 1553 46 1821 9.6 1.8 0.3 C04SLm0061C07.1 79375 79657 (16005) + Gypsy00080 Gypsy 4067 4353 (5593) 47 * 11305 10.9 1.8 0.8 C04SLm0061C07.1 79659 81397 (14265) + Copia00194 Copia 5167 6923 (3339) 48 4201 10.3 1.0 0.5 C04SLm0061C07.1 81403 82025 (13637) C Gypsy00170 Gypsy (2) 8404 7779 49 1211 24.2 2.8 3.7 C04SLm0061C07.1 82012 82440 (13222) C Gypsy00155 Gypsy (1384) 5265 4841 50 * 2542 22.4 6.1 2.5 C04SLm0061C07.1 84026 85046 (10616) + Gypsy00155 Gypsy 4992 5885 (239) 51 1667 24.8 8.6 7.9 C04SLm0061C07.1 84236 85154 (10508) + Copia00089 Copia 764 1688 (9768) 52 * 613 21.6 10.3 3.2 C04SLm0061C07.1 85031 85312 (10350) C Gypsy00191 Gypsy (671) 3577 3276 53 * 246 24.0 4.4 5.2 C04SLm0061C07.1 85205 85340 (10322) C Unknown00029 Unknown (1209) 4500 4366 54 * 574 26.8 4.0 7.0 C04SLm0061C07.1 85692 86136 (9526) C Unknown00029 Unknown (1730) 3979 3548 54 * 4607 26.9 1.5 2.5 C04SLm0061C07.1 85770 88139 (7523) + Gypsy00155 Gypsy 2 2637 (3276) 55 387 26.9 0.0 0.9 C04SLm0061C07.1 88052 88156 (7506) C Gypsy00124 Gypsy (2529) 3303 3200 56 * 291 26.5 12.0 0.0 C04SLm0061C07.1 88053 88169 (7493) C RETROSAT6_I Unknown (1595) 4891 4761 57 * 335 27.7 10.7 0.0 C04SLm0061C07.1 89046 89157 (6505) C OGRE-I_PS Unknown (4690) 7806 7683 58 273 33.7 5.6 3.8 C04SLm0061C07.1 92343 92681 (2981) + LINE1I_MT Unknown 1696 2040 (1494) 59