SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 240 19.3 9.2 6.9 C04SLm0118B03.1 326 542 (138439) C Copia00180 Copia (7277) 4730 4509 1 * 266 15.0 14.3 7.9 C04SLm0118B03.1 351 553 (138428) + Copia00180 Copia 4512 4727 (7280) 1 900 33.4 5.5 6.2 C04SLm0118B03.1 815 2136 (136845) + Gypsy00128 Gypsy 1678 2989 (2680) 2 61677 9.1 2.1 1.0 C04SLm0118B03.1 2139 10998 (127983) C Gypsy00073 Gypsy (233) 11851 2896 3 284 23.7 5.1 5.1 C04SLm0118B03.1 11009 11146 (127835) + Unknown00002 Unknown 4368 4505 (5476) 4 * 6871 22.7 5.6 4.6 C04SLm0118B03.1 11028 14144 (124837) C Gypsy00038 Gypsy (386) 8403 4964 5 1493 27.4 0.9 1.4 C04SLm0118B03.1 14144 14579 (124402) + Gypsy00015 Gypsy 2212 2645 (3531) 6 * 2346 27.5 1.2 0.4 C04SLm0118B03.1 14591 15274 (123707) + Gypsy00020 Gypsy 2618 3306 (2936) 7 631 21.0 3.1 7.7 C04SLm0118B03.1 17767 17988 (120993) + Unknown00025 Unknown 245 456 (5852) 8 369 24.8 3.8 0.9 C04SLm0118B03.1 18671 18776 (120205) + Copia00151 Copia 10060 10168 (593) 9 10012 11.0 3.4 2.8 C04SLm0118B03.1 18856 20605 (118376) C Gypsy00078 Gypsy (3287) 4820 3069 10 1435 15.0 0.0 2.0 C04SLm0118B03.1 20591 20842 (118139) C TLP2 Unknown (54) 252 6 11 * 2523 14.4 2.9 1.3 C04SLm0118B03.1 21582 22058 (116923) + POTTEN1 Unknown 3 487 (622) 12 443 18.0 2.0 2.0 C04SLm0118B03.1 22043 22144 (116837) C Unknown00046 Unknown (9535) 509 408 13 * 514 8.2 0.0 1.0 C04SLm0118B03.1 22146 22244 (116737) C Gypsy00046 Gypsy (6913) 4158 4061 14 12147 8.6 1.1 11.4 C04SLm0118B03.1 25011 27206 (111775) C Gypsy00078 Gypsy (3067) 5040 3070 15 294 8.9 3.3 1.5 C04SLm0118B03.1 27278 27324 (111657) + GYCUME1_LTR Unknown 350 3780 (2231) 16 297 4.9 0.0 0.0 C04SLm0118B03.1 27325 27385 (111596) C Copia00105 Copia (1332) 7525 7465 17 287 24.3 3.5 4.3 C04SLm0118B03.1 27907 28022 (110959) + Unknown00046 Unknown 31 145 (9899) 18 933 13.8 4.1 4.1 C04SLm0118B03.1 31890 32131 (106850) C Gypsy00049 Gypsy (14074) 456 215 19 777 21.3 3.9 0.5 C04SLm0118B03.1 35485 35687 (103294) C HATSOD1 Unknown (15) 4777 4568 20 350 14.0 0.0 5.3 C04SLm0118B03.1 38938 39050 (99931) + Gypsy00042 Gypsy 5910 6016 (1482) 21 1639 19.8 4.1 1.4 C04SLm0118B03.1 41701 42115 (96866) C HATSOD1 Unknown (4366) 426 1 22 844 17.4 2.4 3.4 C04SLm0118B03.1 42311 42518 (96463) + SONATA2 Unknown 48 253 (0) 23 308 18.1 1.2 0.0 C04SLm0118B03.1 43636 43718 (95263) + Gypsy00046 Gypsy 4074 4157 (6914) 24 2668 5.3 1.3 1.1 C04SLm0118B03.1 45450 45831 (93150) C Gypsy00073 Gypsy (11701) 383 1 25 1250 11.7 0.5 0.5 C04SLm0118B03.1 45999 46196 (92785) C Gypsy00073 Gypsy (0) 12084 11887 26 606 22.9 0.7 2.0 C04SLm0118B03.1 46080 46226 (92755) + Gypsy00073 Gypsy 267 411 (11673) 27 * 382 21.2 2.9 4.8 C04SLm0118B03.1 46691 46794 (92187) + Copia00151 Copia 10069 10170 (591) 28 63449 7.2 1.5 3.5 C04SLm0118B03.1 47180 56317 (82664) C Gypsy00073 Gypsy (238) 11846 2894 29 728 35.6 6.1 2.3 C04SLm0118B03.1 58860 60009 (78972) C Copia00144 Copia (1180) 5283 4090 30 638 30.2 3.7 3.0 C04SLm0118B03.1 59741 60173 (78808) C SHACOP16_I_MT Unknown (1118) 2920 2485 31 * 236 25.9 6.0 6.7 C04SLm0118B03.1 60621 60769 (78212) C Copia00005 Copia (2821) 2070 1923 32 * 371 32.2 5.0 3.8 C04SLm0118B03.1 60666 61125 (77856) C BARE1_HV_I Unknown (1987) 3072 2651 33 502 20.3 9.1 6.2 C04SLm0118B03.1 61203 61412 (77569) + Gypsy00155 Gypsy 4841 5056 (1593) 34 393 14.9 0.0 0.0 C04SLm0118B03.1 61402 61488 (77493) C HELITRON7_OS Unknown (8528) 1625 1539 35 * 479 19.4 2.0 0.0 C04SLm0118B03.1 61478 61575 (77406) C Unknown00002 Unknown (5497) 4484 4385 36 * 5180 21.7 6.0 1.0 C04SLm0118B03.1 61569 62825 (76156) + Copia00047 Copia 45 1363 (3443) 37 4306 23.4 7.2 5.2 C04SLm0118B03.1 62325 63679 (75302) C Unknown00033 Unknown (862) 3755 2374 38 * 916 19.5 1.0 3.9 C04SLm0118B03.1 63647 63854 (75127) C Copia00111 Copia (2362) 2418 2217 39 * 1455 19.6 4.6 7.8 C04SLm0118B03.1 64003 64065 (74916) + Unknown00044 Unknown 2439 2919 (1624) 40 1940 18.6 5.5 0.7 C04SLm0118B03.1 64066 64499 (74482) + Copia00112 Copia 2248 2702 (6185) 41 2152 22.0 6.5 7.2 C04SLm0118B03.1 64505 65469 (73512) C Unknown00040 Unknown (3235) 1447 490 42 385 18.6 2.9 1.0 C04SLm0118B03.1 65656 65758 (73223) C Unknown00040 Unknown (4136) 546 442 43 913 21.5 11.8 2.4 C04SLm0118B03.1 66323 66703 (72278) + Copia00139 Copia 3737 4153 (48) 44 240 29.2 0.0 2.7 C04SLm0118B03.1 66775 66848 (72133) + ATGP2LTR Unknown 334 405 (882) 45 * 598 30.5 5.5 2.1 C04SLm0118B03.1 66796 67216 (71765) + Copia00110 Copia 2335 2870 (11262) 46 * 1393 18.7 4.1 2.0 C04SLm0118B03.1 66925 67219 (71762) C TLP2 Unknown (5) 301 1 47 332 25.8 3.2 2.1 C04SLm0118B03.1 68185 68370 (70611) + ALIEN1_CA Unknown 1 188 (83) 48 12509 6.6 2.8 1.9 C04SLm0118B03.1 72546 74306 (64675) + Copia00042 Copia 1 1776 (3267) 49 7464 13.2 6.8 4.5 C04SLm0118B03.1 74927 76401 (62580) C Gypsy00019 Gypsy (5157) 1760 253 50 518 21.5 8.2 2.1 C04SLm0118B03.1 77166 77398 (61583) + Gypsy00036 Gypsy 353 599 (4747) 51 * 785 13.4 7.9 3.8 C04SLm0118B03.1 77191 77413 (61568) C Gypsy00158 Gypsy (638) 5825 5177 52 26848 8.4 0.6 3.0 C04SLm0118B03.1 77608 81474 (57507) + Gypsy00045 Gypsy 1693 5468 (546) 53 10529 9.3 1.0 7.4 C04SLm0118B03.1 81482 83260 (55721) + Gypsy00045 Gypsy 1881 5754 (5) 54 261 19.1 3.1 2.1 C04SLm0118B03.1 84056 84151 (54830) C Copia00089 Copia (5783) 5673 5577 55 254 2.2 0.0 2.1 C04SLm0118B03.1 84111 84157 (54824) + MuDR1_HV Unknown 1272 1317 (5143) 56 * 240 10.3 1.7 0.0 C04SLm0118B03.1 84158 84168 (54813) + Copia00105 Copia 7491 7549 (1308) 57 6692 12.3 0.6 0.6 C04SLm0118B03.1 85859 86924 (52057) C Gypsy00107 Gypsy (990) 9909 8844 58 419 24.5 5.8 5.2 C04SLm0118B03.1 88827 88998 (49983) + ATIS112A Unknown 4541 4713 (386) 59 13327 4.7 2.3 1.2 C04SLm0118B03.1 90002 91712 (47269) + Copia00109 Copia 713 2442 (3925) 60 35326 4.4 0.4 0.9 C04SLm0118B03.1 91718 96412 (42569) + Copia00155 Copia 708 5497 (5) 61 564 15.6 8.6 3.3 C04SLm0118B03.1 96810 96961 (42020) + Gypsy00163 Gypsy 7862 8021 (726) 62 607 11.0 10.8 7.6 C04SLm0118B03.1 97240 97397 (41584) + Gypsy00163 Gypsy 8020 8182 (565) 62 242 29.1 6.8 0.0 C04SLm0118B03.1 102778 102880 (36101) + Copia00151 Copia 10067 10176 (585) 63 522 20.7 5.7 0.0 C04SLm0118B03.1 104132 104271 (34710) + TLP1 Unknown 358 505 (157) 64 * 777 18.3 4.5 0.2 C04SLm0118B03.1 104149 104400 (34581) C TLP2 Unknown (0) 306 7 65 535 13.8 2.3 0.0 C04SLm0118B03.1 108278 108364 (30617) C TS2 Unknown (0) 655 567 66 330 10.4 1.1 6.2 C04SLm0118B03.1 108497 108521 (30460) + GYCUME1_LTR Unknown 49 221 (239) 67 347 5.1 0.0 1.3 C04SLm0118B03.1 108522 108600 (30381) + Gypsy00046 Gypsy 4093 4170 (6901) 68 330 10.4 1.1 6.2 C04SLm0118B03.1 108601 108629 (30352) + GYCUME1_LTR Unknown 222 423 (37) 67 433 22.2 5.8 8.7 C04SLm0118B03.1 116225 116466 (22515) + Copia00039 Copia 259 493 (4057) 69 300 19.3 9.6 0.0 C04SLm0118B03.1 116491 116573 (22408) C Copia00113 Copia (7224) 5182 5092 70 310 21.6 13.6 1.7 C04SLm0118B03.1 116665 116782 (22199) + Copia00113 Copia 5259 5390 (7016) 71 384 11.1 0.0 0.0 C04SLm0118B03.1 118533 118595 (20386) + Copia00170 Copia 4264 4326 (0) 72 * 1453 5.0 0.5 0.0 C04SLm0118B03.1 118540 118739 (20242) C Unknown00049 Unknown (4263) 4768 4568 73 * 36300 4.3 0.2 0.9 C04SLm0118B03.1 118652 123068 (15913) + Copia00018 Copia 1 4386 (0) 74 500 4.0 1.3 0.0 C04SLm0118B03.1 123069 123143 (15838) C Unknown00049 Unknown (1736) 7295 7220 75 252 3.2 0.0 0.0 C04SLm0118B03.1 123144 123174 (15807) + Copia00018 Copia 1 31 (4355) 76 738 0.0 0.0 0.0 C04SLm0118B03.1 123175 123263 (15718) + Copia00018 Copia 1 89 (4297) 76 542 25.1 9.6 1.4 C04SLm0118B03.1 124311 124528 (14453) C TONT1_LE_LTR Unknown (119) 885 650 77 * 1354 20.7 6.5 1.4 C04SLm0118B03.1 124419 124770 (14211) + Unknown00020 Unknown 4 373 (4832) 78 693 20.8 3.9 0.6 C04SLm0118B03.1 124676 124854 (14127) C Unknown00040 Unknown (158) 4524 4340 79 * 292 33.7 4.0 2.3 C04SLm0118B03.1 127208 127475 (11506) + PGGYPSYX1 Unknown 742 2600 (1251) 80 35130 17.0 3.5 3.0 C04SLm0118B03.1 132119 138980 (1) C Gypsy00073 Gypsy (237) 11847 4950 81 * 48218 5.5 0.5 0.9 C04SLm0118B03.1 132918 138981 (0) + Gypsy00064 Gypsy 2 6040 (354) 82