##gff-version 3
##sequence-region C07SLe0027C04.3 1 37411
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match	8001	8352	0.938	+	0	ID=SGN-E347153_alignment_1;Target=SGN-E347153 1 351 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	8001	8352	0.938	+	0	ID=GTH_SGN_E_tom_potato_match_part_1;Target=SGN-E347153 1 351 +;Parent=SGN-E347153_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match	13739	16276	0.995	-	0	ID=SGN-E731859_alignment_1;Target=SGN-E731859 1 763 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	15629	16276	0.994	-	0	ID=GTH_SGN_E_tom_potato_match_part_2;Target=SGN-E731859 1 648 +;Parent=SGN-E731859_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	13739	13853	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_3;Target=SGN-E731859 649 763 +;Parent=SGN-E731859_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match	23531	24318	0.999	-	0	ID=SGN-E213589_alignment_1;Target=SGN-E213589 1 708 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	24158	24318	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_4;Target=SGN-E213589 1 161 +;Parent=SGN-E213589_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	23531	24077	0.998	-	0	ID=GTH_SGN_E_tom_potato_match_part_5;Target=SGN-E213589 162 708 +;Parent=SGN-E213589_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match	23647	24442	0.999	-	0	ID=SGN-E578094_alignment_1;Target=SGN-E578094 1 716 -
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	24158	24442	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_6;Target=SGN-E578094 1 285 -;Parent=SGN-E578094_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	23647	24077	0.998	-	0	ID=GTH_SGN_E_tom_potato_match_part_7;Target=SGN-E578094 286 716 -;Parent=SGN-E578094_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match	23678	24723	0.978	-	0	ID=SGN-E715228_alignment_1;Target=SGN-E715228 1 894 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	24549	24723	0.971	-	0	ID=GTH_SGN_E_tom_potato_match_part_8;Target=SGN-E715228 1 175 +;Parent=SGN-E715228_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	24158	24478	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_9;Target=SGN-E715228 176 496 +;Parent=SGN-E715228_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	23678	24077	0.962	-	0	ID=GTH_SGN_E_tom_potato_match_part_10;Target=SGN-E715228 497 894 +;Parent=SGN-E715228_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match	23685	23910	0.969	-	0	ID=SGN-E352960_alignment_1;Target=SGN-E352960 1 226 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	23685	23910	0.969	-	0	ID=GTH_SGN_E_tom_potato_match_part_11;Target=SGN-E352960 1 226 +;Parent=SGN-E352960_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match	23695	24049	0.975	-	0	ID=SGN-E220936_alignment_1;Target=SGN-E220936 1 355 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	23695	24049	0.975	-	0	ID=GTH_SGN_E_tom_potato_match_part_12;Target=SGN-E220936 1 355 +;Parent=SGN-E220936_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match	23695	23986	0.997	-	0	ID=SGN-E221349_alignment_1;Target=SGN-E221349 1 292 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	23695	23986	0.997	-	0	ID=GTH_SGN_E_tom_potato_match_part_13;Target=SGN-E221349 1 292 +;Parent=SGN-E221349_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match	23701	24330	0.998	-	0	ID=SGN-E336429_alignment_1;Target=SGN-E336429 1 550 -
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	24158	24330	0.994	-	0	ID=GTH_SGN_E_tom_potato_match_part_14;Target=SGN-E336429 1 173 -;Parent=SGN-E336429_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	23701	24077	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_15;Target=SGN-E336429 174 550 -;Parent=SGN-E336429_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match	23745	24753	0.997	-	0	ID=SGN-E717700_alignment_1;Target=SGN-E717700 30 889 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	24549	24753	0.990	-	0	ID=GTH_SGN_E_tom_potato_match_part_16;Target=SGN-E717700 30 235 +;Parent=SGN-E717700_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	24158	24478	0.997	-	0	ID=GTH_SGN_E_tom_potato_match_part_17;Target=SGN-E717700 236 556 +;Parent=SGN-E717700_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	23745	24077	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_18;Target=SGN-E717700 557 889 +;Parent=SGN-E717700_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match	23765	24572	0.905	-	0	ID=SGN-E425860_alignment_1;Target=SGN-E425860 1 639 -
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	24549	24572	0.875	-	0	ID=GTH_SGN_E_tom_potato_match_part_19;Target=SGN-E425860 1 24 -;Parent=SGN-E425860_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	24158	24478	0.938	-	0	ID=GTH_SGN_E_tom_potato_match_part_20;Target=SGN-E425860 25 345 -;Parent=SGN-E425860_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	23765	24077	0.872	-	0	ID=GTH_SGN_E_tom_potato_match_part_21;Target=SGN-E425860 346 639 -;Parent=SGN-E425860_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match	23776	24777	1.000	-	0	ID=SGN-E556556_alignment_1;Target=SGN-E556556 1 852 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	24549	24777	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_22;Target=SGN-E556556 1 229 +;Parent=SGN-E556556_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	24158	24478	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_23;Target=SGN-E556556 230 550 +;Parent=SGN-E556556_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	23776	24077	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_24;Target=SGN-E556556 551 852 +;Parent=SGN-E556556_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match	23778	24720	0.907	-	0	ID=SGN-E410433_alignment_1;Target=SGN-E410433 1 768 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	24549	24720	0.948	-	0	ID=GTH_SGN_E_tom_potato_match_part_25;Target=SGN-E410433 1 172 +;Parent=SGN-E410433_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	24158	24478	0.935	-	0	ID=GTH_SGN_E_tom_potato_match_part_26;Target=SGN-E410433 173 494 +;Parent=SGN-E410433_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	23778	24077	0.853	-	0	ID=GTH_SGN_E_tom_potato_match_part_27;Target=SGN-E410433 495 768 +;Parent=SGN-E410433_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match	23876	24706	1.000	-	0	ID=SGN-E271768_alignment_1;Target=SGN-E271768 1 681 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	24549	24706	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_28;Target=SGN-E271768 1 158 +;Parent=SGN-E271768_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	24158	24478	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_29;Target=SGN-E271768 159 479 +;Parent=SGN-E271768_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	23876	24077	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_30;Target=SGN-E271768 480 681 +;Parent=SGN-E271768_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match	23903	24714	0.983	-	0	ID=SGN-E261559_alignment_1;Target=SGN-E261559 1 662 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	24549	24714	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_31;Target=SGN-E261559 1 166 +;Parent=SGN-E261559_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	24158	24478	0.988	-	0	ID=GTH_SGN_E_tom_potato_match_part_32;Target=SGN-E261559 167 487 +;Parent=SGN-E261559_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	23903	24077	0.960	-	0	ID=GTH_SGN_E_tom_potato_match_part_33;Target=SGN-E261559 488 662 +;Parent=SGN-E261559_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match	23935	24722	0.936	-	0	ID=SGN-E455509_alignment_1;Target=SGN-E455509 16 650 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	24549	24722	0.943	-	0	ID=GTH_SGN_E_tom_potato_match_part_34;Target=SGN-E455509 16 189 +;Parent=SGN-E455509_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	24158	24478	0.938	-	0	ID=GTH_SGN_E_tom_potato_match_part_35;Target=SGN-E455509 190 510 +;Parent=SGN-E455509_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	23935	24077	0.923	-	0	ID=GTH_SGN_E_tom_potato_match_part_36;Target=SGN-E455509 511 650 +;Parent=SGN-E455509_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match	23995	24729	1.000	-	0	ID=SGN-E210483_alignment_1;Target=SGN-E210483 1 585 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	24549	24729	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_37;Target=SGN-E210483 1 181 +;Parent=SGN-E210483_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	24158	24478	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_38;Target=SGN-E210483 182 502 +;Parent=SGN-E210483_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	23995	24077	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_39;Target=SGN-E210483 503 585 +;Parent=SGN-E210483_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match	23995	24722	0.939	-	0	ID=SGN-E425859_alignment_1;Target=SGN-E425859 16 593 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	24549	24722	0.943	-	0	ID=GTH_SGN_E_tom_potato_match_part_40;Target=SGN-E425859 16 189 +;Parent=SGN-E425859_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	24158	24478	0.938	-	0	ID=GTH_SGN_E_tom_potato_match_part_41;Target=SGN-E425859 190 510 +;Parent=SGN-E425859_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	23995	24077	0.940	-	0	ID=GTH_SGN_E_tom_potato_match_part_42;Target=SGN-E425859 511 593 +;Parent=SGN-E425859_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match	24067	24689	1.000	-	0	ID=SGN-E344925_alignment_1;Target=SGN-E344925 1 623 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	24067	24689	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_43;Target=SGN-E344925 1 623 +;Parent=SGN-E344925_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match	24177	24725	1.000	-	0	ID=SGN-E241140_alignment_1;Target=SGN-E241140 1 479 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	24549	24725	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_44;Target=SGN-E241140 1 177 +;Parent=SGN-E241140_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	24177	24478	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_45;Target=SGN-E241140 178 479 +;Parent=SGN-E241140_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match	24202	24702	1.000	-	0	ID=SGN-E338157_alignment_1;Target=SGN-E338157 1 431 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	24549	24702	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_46;Target=SGN-E338157 1 154 +;Parent=SGN-E338157_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	24202	24478	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_47;Target=SGN-E338157 155 431 +;Parent=SGN-E338157_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match	24282	24847	0.998	-	0	ID=SGN-E211999_alignment_1;Target=SGN-E211999 1 496 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	24549	24847	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_48;Target=SGN-E211999 1 299 +;Parent=SGN-E211999_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	24282	24478	0.995	-	0	ID=GTH_SGN_E_tom_potato_match_part_49;Target=SGN-E211999 300 496 +;Parent=SGN-E211999_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match	24417	24718	1.000	-	0	ID=SGN-E289092_alignment_1;Target=SGN-E289092 1 232 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	24549	24718	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_50;Target=SGN-E289092 1 170 +;Parent=SGN-E289092_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	match_part	24417	24478	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_51;Target=SGN-E289092 171 232 +;Parent=SGN-E289092_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	gene	8001	8352	.	+	0	ID=GTH_SGN_E_tom_potato_gene_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	mRNA	8001	8352	.	+	0	ID=GTH_SGN_E_tom_potato_gene_1_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	exon	8001	8352	0.938	+	0	ID=GTH_SGN_E_tom_potato_exon_1;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	gene	13739	16276	.	-	0	ID=GTH_SGN_E_tom_potato_gene_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	mRNA	13739	16276	.	-	0	ID=GTH_SGN_E_tom_potato_gene_2_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	exon	15629	16276	0.994	-	0	ID=GTH_SGN_E_tom_potato_exon_2;Parent=GTH_SGN_E_tom_potato_gene_2_AGS_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	exon	13739	13853	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_3;Parent=GTH_SGN_E_tom_potato_gene_2_AGS_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	gene	23531	24847	.	-	0	ID=GTH_SGN_E_tom_potato_gene_3
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	mRNA	23531	24847	.	-	0	ID=GTH_SGN_E_tom_potato_gene_3_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_3
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	exon	24549	24847	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_4;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	exon	24158	24478	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_5;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	exon	23531	24077	0.998	-	0	ID=GTH_SGN_E_tom_potato_exon_6;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	mRNA	24067	24689	.	-	0	ID=GTH_SGN_E_tom_potato_gene_3_AGS_2;Parent=GTH_SGN_E_tom_potato_gene_3
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato_potato	exon	24067	24689	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_7;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_2
C07SLe0027C04.3	RepeatMasker	nucleotide_motif	3231	3544	2393	-	0	ID=Unknown00034_alignment_1;Target=Unknown00034 3700 4016 -
C07SLe0027C04.3	RepeatMasker	nucleotide_motif	3540	4027	3912	+	0	ID=Copia00168_alignment_1;Target=Copia00168 4168 4655 +
C07SLe0027C04.3	RepeatMasker	nucleotide_motif	4134	9042	39974	+	0	ID=Copia00005_alignment_1;Target=Copia00005 1 4891 +
C07SLe0027C04.3	RepeatMasker	nucleotide_motif	8970	9218	1325	-	0	ID=Unknown00035_alignment_1;Target=Unknown00035 1 249 -
C07SLe0027C04.3	RepeatMasker	nucleotide_motif	9347	9431	623	+	0	ID=Copia00005_alignment_2;Target=Copia00005 1 84 +
C07SLe0027C04.3	RepeatMasker	nucleotide_motif	10317	10363	239	-	0	ID=Unknown00002_alignment_1;Target=Unknown00002 9810 9856 -
C07SLe0027C04.3	RepeatMasker	nucleotide_motif	10767	13013	7276	-	0	ID=Copia00058_alignment_1;Target=Copia00058 2311 4599 -
C07SLe0027C04.3	RepeatMasker	nucleotide_motif	13024	13270	1010	-	0	ID=Gypsy00049_alignment_1;Target=Gypsy00049 212 458 -
C07SLe0027C04.3	RepeatMasker	nucleotide_motif	13739	13871	348	-	0	ID=Copia00149_alignment_1;Target=Copia00149 10583 10718 -
C07SLe0027C04.3	RepeatMasker	nucleotide_motif	16389	16982	1638	-	0	ID=Copia00149_alignment_2;Target=Copia00149 2437 8714 -
C07SLe0027C04.3	RepeatMasker	nucleotide_motif	17001	18809	6279	+	0	ID=Copia00039_alignment_1;Target=Copia00039 2107 4129 +
C07SLe0027C04.3	RepeatMasker	nucleotide_motif	18594	18850	1103	-	0	ID=Copia00058_alignment_2;Target=Copia00058 401 658 -
C07SLe0027C04.3	RepeatMasker	nucleotide_motif	26166	28310	5826	+	0	ID=Unknown00020_alignment_1;Target=Unknown00020 76 2221 +
C07SLe0027C04.3	RepeatMasker	nucleotide_motif	26463	28320	7811	-	0	ID=TONT1_LE_I_alignment_1;Target=TONT1_LE_I 2730 4629 -
C07SLe0027C04.3	RepeatMasker	nucleotide_motif	28331	28366	241	-	0	ID=Unknown00028_alignment_1;Target=Unknown00028 802 837 -
C07SLe0027C04.3	RepeatMasker	nucleotide_motif	28387	28543	638	-	0	ID=Copia00171_alignment_1;Target=Copia00171 1222 1378 -
C07SLe0027C04.3	RepeatMasker	nucleotide_motif	31163	31403	842	-	0	ID=Copia00035_alignment_1;Target=Copia00035 1 240 -
C07SLe0027C04.3	RepeatMasker	nucleotide_motif	31239	35742	31220	+	0	ID=Copia00188_alignment_1;Target=Copia00188 1 9809 +
C07SLe0027C04.3	RepeatMasker	nucleotide_motif	35651	35763	662	-	0	ID=Copia00120_alignment_1;Target=Copia00120 121 232 -
C07SLe0027C04.3	RepeatMasker	nucleotide_motif	35821	36062	884	-	0	ID=Copia00035_alignment_2;Target=Copia00035 1 240 -
C07SLe0027C04.3	RepeatMasker	nucleotide_motif	35897	36237	1594	+	0	ID=Copia00188_alignment_2;Target=Copia00188 1 9809 +
C07SLe0027C04.3	RepeatMasker	nucleotide_motif	36800	37027	1275	+	0	ID=Copia00039_alignment_2;Target=Copia00039 264 492 +
C07SLe0027C04.3	RepeatMasker	nucleotide_motif	37029	37128	403	-	0	ID=Copia00039_alignment_3;Target=Copia00039 938 1036 -
C07SLe0027C04.3	RepeatMasker	nucleotide_motif	37055	37146	253	+	0	ID=Copia00039_alignment_4;Target=Copia00039 912 1013 +
C07SLe0027C04.3	RepeatMasker	nucleotide_motif	37270	37411	1006	+	0	ID=Copia00039_alignment_5;Target=Copia00039 488 629 +
C07SLe0027C04.3	BLAST_tomato_bacs	match	3772	4974	1233	+	0	ID=C00HBa0074N01.2_rev_alignment_1;blast_gaps=12;Target=clone-C00HBa0074N01.2 85418 86617 -;blast_match_length=1202;blast_percent_identity=89.01;blast_mismatches=116;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	6236	8285	2674	+	0	ID=C00HBa0074N01.2_rev_alignment_2;blast_gaps=7;Target=clone-C00HBa0074N01.2 82151 84192 -;blast_match_length=2049;blast_percent_identity=91.72;blast_mismatches=158;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	3540	4974	2143	+	0	ID=C00HBa0198I15.2_fwd_alignment_1;blast_gaps=7;Target=clone-C00HBa0198I15.2 95154 96573 +;blast_match_length=1434;blast_percent_identity=94.17;blast_mismatches=59;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	5973	7179	2016	+	0	ID=C00HBa0198I15.2_fwd_alignment_2;blast_gaps=2;Target=clone-C00HBa0198I15.2 97572 98780 +;blast_match_length=1206;blast_percent_identity=96.20;blast_mismatches=44;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	3740	4974	1998	+	0	ID=C00SLm0024O10.1_fwd_alignment_1;blast_gaps=6;Target=clone-C00SLm0024O10.1 36792 38026 +;blast_match_length=1234;blast_percent_identity=96.13;blast_mismatches=40;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	5972	8568	4343	+	0	ID=C00SLm0024O10.1_fwd_alignment_2;blast_gaps=7;Target=clone-C00SLm0024O10.1 39020 41617 +;blast_match_length=2596;blast_percent_identity=96.46;blast_mismatches=85;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	32843	35781	2450	+	0	ID=C01HBa0163B20.1_rev_alignment_1;blast_gaps=28;Target=clone-C01HBa0163B20.1 116426 119355 -;blast_match_length=2938;blast_percent_identity=86.13;blast_mismatches=354;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	6555	7994	1211	+	0	ID=C01HBa0252G05.2_fwd_alignment_1;blast_gaps=15;Target=clone-C01HBa0252G05.2 129862 131294 +;blast_match_length=1439;blast_percent_identity=86.57;blast_mismatches=177;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	33768	36090	3291	+	0	ID=C03HBa0031O24.1_rev_alignment_1;blast_gaps=7;Target=clone-C03HBa0031O24.1 36806 39132 -;blast_match_length=2322;blast_percent_identity=93.05;blast_mismatches=150;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	33186	35608	2666	+	0	ID=C03HBa0088L10.1_fwd_alignment_1;blast_gaps=15;Target=clone-C03HBa0088L10.1 12725 15156 +;blast_match_length=2422;blast_percent_identity=89.27;blast_mismatches=235;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	5972	8943	4839	+	0	ID=C04HBa0008H22.1_rev_alignment_1;blast_gaps=5;Target=clone-C04HBa0008H22.1 32163 35135 -;blast_match_length=2971;blast_percent_identity=95.80;blast_mismatches=118;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	32773	35674	3271	+	0	ID=C04HBa0050I18.1_fwd_alignment_1;blast_gaps=20;Target=clone-C04HBa0050I18.1 60609 63518 +;blast_match_length=2901;blast_percent_identity=89.70;blast_mismatches=269;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	31091	32781	2169	+	0	ID=C04HBa0050I18.1_fwd_alignment_2;blast_gaps=10;Target=clone-C04HBa0050I18.1 58892 60587 +;blast_match_length=1690;blast_percent_identity=91.88;blast_mismatches=127;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	3770	4974	1657	+	0	ID=C04HBa0109P04.1_rev_alignment_1;blast_gaps=6;Target=clone-C04HBa0109P04.1 28716 29921 -;blast_match_length=1204;blast_percent_identity=92.98;blast_mismatches=76;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	7033	8285	1838	+	0	ID=C04HBa0109P04.1_rev_alignment_2;blast_gaps=4;Target=clone-C04HBa0109P04.1 25391 26639 -;blast_match_length=1252;blast_percent_identity=93.71;blast_mismatches=71;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	6576	9416	4440	+	0	ID=C04SLm0005D07.1_fwd_alignment_1;blast_gaps=5;Target=clone-C04SLm0005D07.1 58054 60902 +;blast_match_length=2840;blast_percent_identity=94.92;blast_mismatches=131;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	5972	8913	4885	+	0	ID=C04SLm0130G07.1_rev_alignment_1;blast_gaps=6;Target=clone-C04SLm0130G07.1 7650 10590 -;blast_match_length=2941;blast_percent_identity=96.26;blast_mismatches=103;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	3540	4857	1913	+	0	ID=C05HBa0013K15.1_rev_alignment_1;blast_gaps=5;Target=clone-C05HBa0013K15.1 13692 14995 -;blast_match_length=1317;blast_percent_identity=93.50;blast_mismatches=62;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	5972	8833	4676	+	0	ID=C05HBa0013K15.1_rev_alignment_2;blast_gaps=7;Target=clone-C05HBa0013K15.1 9935 12785 -;blast_match_length=2861;blast_percent_identity=95.95;blast_mismatches=101;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	3772	4974	1853	+	0	ID=C05HBa0298C03.1_fwd_alignment_1;blast_gaps=7;Target=clone-C05HBa0298C03.1 52630 53837 +;blast_match_length=1202;blast_percent_identity=95.12;blast_mismatches=50;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	5972	8821	4536	+	0	ID=C05HBa0298C03.1_fwd_alignment_2;blast_gaps=7;Target=clone-C05HBa0298C03.1 54833 57665 +;blast_match_length=2849;blast_percent_identity=95.34;blast_mismatches=112;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	10537	11929	1144	+	0	ID=C05SLm0079C22.1_rev_alignment_1;blast_gaps=8;Target=clone-C05SLm0079C22.1 14551 15946 -;blast_match_length=1392;blast_percent_identity=85.73;blast_mismatches=185;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	16983	18328	1501	+	0	ID=C05SLm0079C22.1_rev_alignment_2;blast_gaps=4;Target=clone-C05SLm0079C22.1 12099 13435 -;blast_match_length=1345;blast_percent_identity=89.17;blast_mismatches=133;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	16983	18328	1501	+	0	ID=C05SLm0115G01.3_rev_alignment_1;blast_gaps=4;Target=clone-C05SLm0115G01.3 139464 140800 -;blast_match_length=1345;blast_percent_identity=89.17;blast_mismatches=133;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	33767	36123	2577	+	0	ID=C06HBa0026E06.2_rev_alignment_1;blast_gaps=12;Target=clone-C06HBa0026E06.2 84865 87225 -;blast_match_length=2356;blast_percent_identity=89.22;blast_mismatches=241;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	6362	8285	2331	+	0	ID=C06HBa0076N05.1_rev_alignment_1;blast_gaps=10;Target=clone-C06HBa0076N05.1 27434 29357 -;blast_match_length=1923;blast_percent_identity=90.73;blast_mismatches=167;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	6628	7851	1679	+	0	ID=C06HBa0095I22.1_fwd_alignment_1;blast_gaps=3;Target=clone-C06HBa0095I22.1 56684 57910 +;blast_match_length=1223;blast_percent_identity=92.50;blast_mismatches=89;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	33767	36123	2577	+	0	ID=C06HBa0118O07.2_fwd_alignment_1;blast_gaps=12;Target=clone-C06HBa0118O07.2 53019 55379 +;blast_match_length=2356;blast_percent_identity=89.22;blast_mismatches=241;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	6738	8504	2167	+	0	ID=C06SLe0129O21.1_rev_alignment_1;blast_gaps=9;Target=clone-C06SLe0129O21.1 29288 31053 -;blast_match_length=1766;blast_percent_identity=91.08;blast_mismatches=147;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	5973	8270	3041	+	0	ID=C06SLm0134B10.1_fwd_alignment_1;blast_gaps=8;Target=clone-C06SLm0134B10.1 109116 111409 +;blast_match_length=2297;blast_percent_identity=91.96;blast_mismatches=173;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	14807	16296	2954	+	0	ID=C07HBa0106F06.1_rev_alignment_1;blast_gaps=0;Target=clone-C07HBa0106F06.1 12211 13700 -;blast_match_length=1489;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	2752	4974	4222	+	0	ID=C07HBa0106F06.1_rev_alignment_2;blast_gaps=0;Target=clone-C07HBa0106F06.1 23533 25755 -;blast_match_length=2222;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	5972	9993	7884	+	0	ID=C07HBa0106F06.1_rev_alignment_3;blast_gaps=0;Target=clone-C07HBa0106F06.1 18514 22535 -;blast_match_length=4021;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	16668	19598	5622	+	0	ID=C07HBa0106F06.1_rev_alignment_4;blast_gaps=0;Target=clone-C07HBa0106F06.1 8909 11839 -;blast_match_length=2930;blast_percent_identity=99.73;blast_mismatches=8;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	10476	13053	5079	+	0	ID=C07HBa0106F06.1_rev_alignment_5;blast_gaps=0;Target=clone-C07HBa0106F06.1 15454 18031 -;blast_match_length=2577;blast_percent_identity=99.84;blast_mismatches=4;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	3740	4974	1998	+	0	ID=C07SLe0008H22.2_fwd_alignment_1;blast_gaps=6;Target=clone-C07SLe0008H22.2 34217 35451 +;blast_match_length=1234;blast_percent_identity=96.13;blast_mismatches=40;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	5972	8568	4335	+	0	ID=C07SLe0008H22.2_fwd_alignment_2;blast_gaps=7;Target=clone-C07SLe0008H22.2 36445 39042 +;blast_match_length=2596;blast_percent_identity=96.42;blast_mismatches=86;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	3747	4972	1764	+	0	ID=C08HBa0006I18.1_rev_alignment_1;blast_gaps=8;Target=clone-C08HBa0006I18.1 35105 36324 -;blast_match_length=1225;blast_percent_identity=93.83;blast_mismatches=60;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	6420	8762	3606	+	0	ID=C08HBa0006I18.1_rev_alignment_2;blast_gaps=7;Target=clone-C08HBa0006I18.1 31362 33700 -;blast_match_length=2342;blast_percent_identity=94.72;blast_mismatches=112;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	3753	4974	1691	+	0	ID=C08HBa0022O08.1_fwd_alignment_1;blast_gaps=9;Target=clone-C08HBa0022O08.1 120757 121970 +;blast_match_length=1221;blast_percent_identity=93.31;blast_mismatches=68;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	5972	8821	4066	+	0	ID=C08HBa0022O08.1_fwd_alignment_2;blast_gaps=12;Target=clone-C08HBa0022O08.1 122962 125805 +;blast_match_length=2849;blast_percent_identity=93.52;blast_mismatches=171;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	3843	4974	1766	+	0	ID=C08HBa0129D03.1_fwd_alignment_1;blast_gaps=5;Target=clone-C08HBa0129D03.1 50245 51378 +;blast_match_length=1131;blast_percent_identity=95.25;blast_mismatches=46;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	5972	9343	5448	+	0	ID=C08HBa0129D03.1_fwd_alignment_2;blast_gaps=9;Target=clone-C08HBa0129D03.1 52374 55734 +;blast_match_length=3371;blast_percent_identity=95.68;blast_mismatches=127;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	5976	8734	3788	+	0	ID=C08SLm0003L21.1_rev_alignment_1;blast_gaps=16;Target=clone-C08SLm0003L21.1 105345 108103 -;blast_match_length=2758;blast_percent_identity=92.92;blast_mismatches=174;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	3540	4974	2258	+	0	ID=C08SLm0012O12.1_rev_alignment_1;blast_gaps=6;Target=clone-C08SLm0012O12.1 18684 20112 -;blast_match_length=1434;blast_percent_identity=95.34;blast_mismatches=55;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	7973	9414	2373	+	0	ID=C08SLm0012O12.1_rev_alignment_2;blast_gaps=3;Target=clone-C08SLm0012O12.1 14261 15706 -;blast_match_length=1441;blast_percent_identity=95.93;blast_mismatches=45;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	5972	7951	3390	+	0	ID=C08SLm0012O12.1_rev_alignment_3;blast_gaps=4;Target=clone-C08SLm0012O12.1 15709 17688 -;blast_match_length=1979;blast_percent_identity=96.77;blast_mismatches=60;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	5972	9430	5864	+	0	ID=C08SLm0119G07.1_fwd_alignment_1;blast_gaps=10;Target=clone-C08SLm0119G07.1 69103 72555 +;blast_match_length=3458;blast_percent_identity=96.60;blast_mismatches=88;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	3540	4974	2418	+	0	ID=C08SLm0119G07.1_fwd_alignment_2;blast_gaps=5;Target=clone-C08SLm0119G07.1 66678 68110 +;blast_match_length=1434;blast_percent_identity=96.73;blast_mismatches=39;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	3770	4974	1871	+	0	ID=C09HBa0142I14.1_fwd_alignment_1;blast_gaps=6;Target=clone-C09HBa0142I14.1 3814 5026 +;blast_match_length=1204;blast_percent_identity=95.06;blast_mismatches=48;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	5972	8416	3927	+	0	ID=C09HBa0142I14.1_fwd_alignment_2;blast_gaps=9;Target=clone-C09HBa0142I14.1 6021 8463 +;blast_match_length=2444;blast_percent_identity=95.75;blast_mismatches=94;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	33770	36233	2882	+	0	ID=C09HBa0166O16.1_fwd_alignment_1;blast_gaps=13;Target=clone-C09HBa0166O16.1 66910 69366 +;blast_match_length=2463;blast_percent_identity=90.13;blast_mismatches=221;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	31087	32781	2111	+	0	ID=C09HBa0166O16.1_fwd_alignment_2;blast_gaps=9;Target=clone-C09HBa0166O16.1 64182 65881 +;blast_match_length=1694;blast_percent_identity=91.48;blast_mismatches=136;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	32773	36233	5128	+	0	ID=C09HBa0317H24.1_fwd_alignment_1;blast_gaps=12;Target=clone-C09HBa0317H24.1 97578 101056 +;blast_match_length=3460;blast_percent_identity=93.85;blast_mismatches=192;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	31088	32780	2573	+	0	ID=C09HBa0317H24.1_fwd_alignment_2;blast_gaps=7;Target=clone-C09HBa0317H24.1 95858 97555 +;blast_match_length=1692;blast_percent_identity=94.82;blast_mismatches=81;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	33389	35962	3392	+	0	ID=C09SLm0080E11.1_fwd_alignment_1;blast_gaps=12;Target=clone-C09SLm0080E11.1 23391 25977 +;blast_match_length=2573;blast_percent_identity=91.86;blast_mismatches=188;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	5972	8813	4946	+	0	ID=C11HBa0072I13.1_rev_alignment_1;blast_gaps=6;Target=clone-C11HBa0072I13.1 123210 126048 -;blast_match_length=2841;blast_percent_identity=97.26;blast_mismatches=69;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	6179	7323	1041	+	0	ID=C12HBa0021L02.1_rev_alignment_1;blast_gaps=9;Target=clone-C12HBa0021L02.1 116175 117310 -;blast_match_length=1144;blast_percent_identity=87.03;blast_mismatches=132;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	6047	8070	2018	+	0	ID=C12HBa0021L02.1_fwd_alignment_1;blast_gaps=17;Target=clone-C12HBa0021L02.1 120603 122618 +;blast_match_length=2023;blast_percent_identity=88.24;blast_mismatches=213;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	32917	36087	3580	+	0	ID=C12HBa0047D08.1_rev_alignment_1;blast_gaps=23;Target=clone-C12HBa0047D08.1 56279 59459 -;blast_match_length=3170;blast_percent_identity=89.65;blast_mismatches=285;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	31088	32757	2149	+	0	ID=C12HBa0047D08.1_rev_alignment_2;blast_gaps=10;Target=clone-C12HBa0047D08.1 59606 61279 -;blast_match_length=1669;blast_percent_identity=92.01;blast_mismatches=124;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	3540	4974	2321	+	0	ID=C12HBa0188O11.1_fwd_alignment_1;blast_gaps=6;Target=clone-C12HBa0188O11.1 111668 113092 +;blast_match_length=1434;blast_percent_identity=95.90;blast_mismatches=43;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	5972	7827	3211	+	0	ID=C12HBa0188O11.1_fwd_alignment_2;blast_gaps=4;Target=clone-C12HBa0188O11.1 114085 115944 +;blast_match_length=1855;blast_percent_identity=96.99;blast_mismatches=52;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	6157	8070	1865	+	0	ID=C12SLe0004H16.1_rev_alignment_1;blast_gaps=16;Target=clone-C12SLe0004H16.1 63866 65775 -;blast_match_length=1913;blast_percent_identity=87.94;blast_mismatches=208;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bacs	match	5972	7827	3211	+	0	ID=C12SLe0050N03.1_fwd_alignment_1;blast_gaps=4;Target=clone-C12SLe0050N03.1 36543 38402 +;blast_match_length=1855;blast_percent_identity=96.99;blast_mismatches=52;blast_evalue=0.0
C07SLe0027C04.3	Contigs	contig	1	37411	.	.	0	ID=contig1_1;length=37411
C07SLe0027C04.3	BLAST_tomato_bac_ends	clone_start	4827	4974	270	+	0	ID=C07SLe0027C04.3-LE_HBa0041E20_T7_42855_1;blast_gaps=1;Target=LE_HBa0041E20_T7_42855 3 149 +;is_problematic=0;blast_percent_identity=98.65;blast_mismatches=1;blast_evalue=5e-69
C07SLe0027C04.3	BLAST_tomato_bac_ends	clone_start	4827	4974	278	+	0	ID=C07SLe0027C04.3-LE_HBa0028B09_T7_137910_1;blast_gaps=1;Target=LE_HBa0028B09_T7_137910 3 149 +;is_problematic=0;blast_percent_identity=99.32;blast_mismatches=0;blast_evalue=2e-71
C07SLe0027C04.3	BLAST_tomato_bac_ends	clone_end	5972	6435	864	+	0	ID=C07SLe0027C04.3-SL_EcoRI0093J23_SP6_309346_1;blast_gaps=0;Target=SL_EcoRI0093J23_SP6_309346 180 643 +;is_problematic=0;blast_percent_identity=98.49;blast_mismatches=7;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bac_ends	clone_start	6044	6548	922	+	0	ID=C07SLe0027C04.3-SL_MboI0113G20_T7_196540_1;blast_gaps=1;Target=SL_MboI0113G20_T7_196540 9 512 +;is_problematic=0;blast_percent_identity=98.22;blast_mismatches=8;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bac_ends	clone_end	14885	15612	1427	-	0	ID=C07SLe0027C04.3-LE_HBa0173B04_SP6_104886_1;blast_gaps=0;Target=LE_HBa0173B04_SP6_104886 1 728 +;is_problematic=0;blast_percent_identity=99.73;blast_mismatches=2;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bac_ends	clone_start	14916	15612	1366	-	0	ID=C07SLe0027C04.3-LE_HBa0173B04_T7_104887_1;blast_gaps=0;Target=LE_HBa0173B04_T7_104887 1 697 +;is_problematic=0;blast_percent_identity=99.71;blast_mismatches=2;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bac_ends	clone_end	27500	28066	1124	+	0	ID=C07SLe0027C04.3-SL_MboI0026L02_SP6_217863_1;blast_gaps=0;Target=SL_MboI0026L02_SP6_217863 1 567 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bac_ends	clone_end	34961	35413	844	+	0	ID=C07SLe0027C04.3-SL_MboI0143F22_SP6_364302_1;blast_gaps=1;Target=SL_MboI0143F22_SP6_364302 1 454 +;is_problematic=0;blast_percent_identity=98.68;blast_mismatches=5;blast_evalue=0.0
C07SLe0027C04.3	BLAST_tomato_bac_ends	clone_end	35669	36087	831	-	0	ID=C07SLe0027C04.3-SL_FOS0102F05_pIBR_501528_1;blast_gaps=0;Target=SL_FOS0102F05_pIBR_501528 1 419 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match	8001	8352	0.938	+	0	ID=SGN-E347153_alignment_2;Target=SGN-E347153 1 351 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	8001	8352	0.938	+	0	ID=GTH_SGN_E_tom_match_part_1;Target=SGN-E347153 1 351 +;Parent=SGN-E347153_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match	13739	16276	0.995	-	0	ID=SGN-E731859_alignment_2;Target=SGN-E731859 1 763 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	15629	16276	0.994	-	0	ID=GTH_SGN_E_tom_match_part_2;Target=SGN-E731859 1 648 +;Parent=SGN-E731859_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	13739	13853	1.000	-	0	ID=GTH_SGN_E_tom_match_part_3;Target=SGN-E731859 649 763 +;Parent=SGN-E731859_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match	23531	24318	0.999	-	0	ID=SGN-E213589_alignment_2;Target=SGN-E213589 1 708 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	24158	24318	1.000	-	0	ID=GTH_SGN_E_tom_match_part_4;Target=SGN-E213589 1 161 +;Parent=SGN-E213589_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	23531	24077	0.998	-	0	ID=GTH_SGN_E_tom_match_part_5;Target=SGN-E213589 162 708 +;Parent=SGN-E213589_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match	23647	24442	0.999	-	0	ID=SGN-E578094_alignment_2;Target=SGN-E578094 1 716 -
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	24158	24442	1.000	-	0	ID=GTH_SGN_E_tom_match_part_6;Target=SGN-E578094 1 285 -;Parent=SGN-E578094_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	23647	24077	0.998	-	0	ID=GTH_SGN_E_tom_match_part_7;Target=SGN-E578094 286 716 -;Parent=SGN-E578094_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match	23678	24723	0.978	-	0	ID=SGN-E715228_alignment_2;Target=SGN-E715228 1 894 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	24549	24723	0.971	-	0	ID=GTH_SGN_E_tom_match_part_8;Target=SGN-E715228 1 175 +;Parent=SGN-E715228_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	24158	24478	1.000	-	0	ID=GTH_SGN_E_tom_match_part_9;Target=SGN-E715228 176 496 +;Parent=SGN-E715228_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	23678	24077	0.962	-	0	ID=GTH_SGN_E_tom_match_part_10;Target=SGN-E715228 497 894 +;Parent=SGN-E715228_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match	23685	23910	0.969	-	0	ID=SGN-E352960_alignment_2;Target=SGN-E352960 1 226 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	23685	23910	0.969	-	0	ID=GTH_SGN_E_tom_match_part_11;Target=SGN-E352960 1 226 +;Parent=SGN-E352960_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match	23695	24049	0.975	-	0	ID=SGN-E220936_alignment_2;Target=SGN-E220936 1 355 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	23695	24049	0.975	-	0	ID=GTH_SGN_E_tom_match_part_12;Target=SGN-E220936 1 355 +;Parent=SGN-E220936_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match	23695	23986	0.997	-	0	ID=SGN-E221349_alignment_2;Target=SGN-E221349 1 292 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	23695	23986	0.997	-	0	ID=GTH_SGN_E_tom_match_part_13;Target=SGN-E221349 1 292 +;Parent=SGN-E221349_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match	23701	24330	0.998	-	0	ID=SGN-E336429_alignment_2;Target=SGN-E336429 1 550 -
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	24158	24330	0.994	-	0	ID=GTH_SGN_E_tom_match_part_14;Target=SGN-E336429 1 173 -;Parent=SGN-E336429_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	23701	24077	1.000	-	0	ID=GTH_SGN_E_tom_match_part_15;Target=SGN-E336429 174 550 -;Parent=SGN-E336429_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match	23745	24753	0.997	-	0	ID=SGN-E717700_alignment_2;Target=SGN-E717700 30 889 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	24549	24753	0.990	-	0	ID=GTH_SGN_E_tom_match_part_16;Target=SGN-E717700 30 235 +;Parent=SGN-E717700_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	24158	24478	0.997	-	0	ID=GTH_SGN_E_tom_match_part_17;Target=SGN-E717700 236 556 +;Parent=SGN-E717700_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	23745	24077	1.000	-	0	ID=GTH_SGN_E_tom_match_part_18;Target=SGN-E717700 557 889 +;Parent=SGN-E717700_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match	23776	24777	1.000	-	0	ID=SGN-E556556_alignment_2;Target=SGN-E556556 1 852 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	24549	24777	1.000	-	0	ID=GTH_SGN_E_tom_match_part_19;Target=SGN-E556556 1 229 +;Parent=SGN-E556556_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	24158	24478	1.000	-	0	ID=GTH_SGN_E_tom_match_part_20;Target=SGN-E556556 230 550 +;Parent=SGN-E556556_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	23776	24077	1.000	-	0	ID=GTH_SGN_E_tom_match_part_21;Target=SGN-E556556 551 852 +;Parent=SGN-E556556_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match	23876	24706	1.000	-	0	ID=SGN-E271768_alignment_2;Target=SGN-E271768 1 681 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	24549	24706	1.000	-	0	ID=GTH_SGN_E_tom_match_part_22;Target=SGN-E271768 1 158 +;Parent=SGN-E271768_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	24158	24478	1.000	-	0	ID=GTH_SGN_E_tom_match_part_23;Target=SGN-E271768 159 479 +;Parent=SGN-E271768_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	23876	24077	1.000	-	0	ID=GTH_SGN_E_tom_match_part_24;Target=SGN-E271768 480 681 +;Parent=SGN-E271768_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match	23903	24714	0.983	-	0	ID=SGN-E261559_alignment_2;Target=SGN-E261559 1 662 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	24549	24714	1.000	-	0	ID=GTH_SGN_E_tom_match_part_25;Target=SGN-E261559 1 166 +;Parent=SGN-E261559_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	24158	24478	0.988	-	0	ID=GTH_SGN_E_tom_match_part_26;Target=SGN-E261559 167 487 +;Parent=SGN-E261559_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	23903	24077	0.960	-	0	ID=GTH_SGN_E_tom_match_part_27;Target=SGN-E261559 488 662 +;Parent=SGN-E261559_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match	23995	24729	1.000	-	0	ID=SGN-E210483_alignment_2;Target=SGN-E210483 1 585 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	24549	24729	1.000	-	0	ID=GTH_SGN_E_tom_match_part_28;Target=SGN-E210483 1 181 +;Parent=SGN-E210483_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	24158	24478	1.000	-	0	ID=GTH_SGN_E_tom_match_part_29;Target=SGN-E210483 182 502 +;Parent=SGN-E210483_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	23995	24077	1.000	-	0	ID=GTH_SGN_E_tom_match_part_30;Target=SGN-E210483 503 585 +;Parent=SGN-E210483_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match	24067	24689	1.000	-	0	ID=SGN-E344925_alignment_2;Target=SGN-E344925 1 623 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	24067	24689	1.000	-	0	ID=GTH_SGN_E_tom_match_part_31;Target=SGN-E344925 1 623 +;Parent=SGN-E344925_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match	24177	24725	1.000	-	0	ID=SGN-E241140_alignment_2;Target=SGN-E241140 1 479 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	24549	24725	1.000	-	0	ID=GTH_SGN_E_tom_match_part_32;Target=SGN-E241140 1 177 +;Parent=SGN-E241140_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	24177	24478	1.000	-	0	ID=GTH_SGN_E_tom_match_part_33;Target=SGN-E241140 178 479 +;Parent=SGN-E241140_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match	24202	24702	1.000	-	0	ID=SGN-E338157_alignment_2;Target=SGN-E338157 1 431 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	24549	24702	1.000	-	0	ID=GTH_SGN_E_tom_match_part_34;Target=SGN-E338157 1 154 +;Parent=SGN-E338157_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	24202	24478	1.000	-	0	ID=GTH_SGN_E_tom_match_part_35;Target=SGN-E338157 155 431 +;Parent=SGN-E338157_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match	24282	24847	0.998	-	0	ID=SGN-E211999_alignment_2;Target=SGN-E211999 1 496 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	24549	24847	1.000	-	0	ID=GTH_SGN_E_tom_match_part_36;Target=SGN-E211999 1 299 +;Parent=SGN-E211999_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	24282	24478	0.995	-	0	ID=GTH_SGN_E_tom_match_part_37;Target=SGN-E211999 300 496 +;Parent=SGN-E211999_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match	24417	24718	1.000	-	0	ID=SGN-E289092_alignment_2;Target=SGN-E289092 1 232 +
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	24549	24718	1.000	-	0	ID=GTH_SGN_E_tom_match_part_38;Target=SGN-E289092 1 170 +;Parent=SGN-E289092_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	match_part	24417	24478	1.000	-	0	ID=GTH_SGN_E_tom_match_part_39;Target=SGN-E289092 171 232 +;Parent=SGN-E289092_alignment_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	gene	8001	8352	.	+	0	ID=GTH_SGN_E_tom_gene_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	mRNA	8001	8352	.	+	0	ID=GTH_SGN_E_tom_gene_1_AGS_1;Parent=GTH_SGN_E_tom_gene_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	exon	8001	8352	0.938	+	0	ID=GTH_SGN_E_tom_exon_1;Parent=GTH_SGN_E_tom_gene_1_AGS_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	gene	13739	16276	.	-	0	ID=GTH_SGN_E_tom_gene_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	mRNA	13739	16276	.	-	0	ID=GTH_SGN_E_tom_gene_2_AGS_1;Parent=GTH_SGN_E_tom_gene_2
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	exon	15629	16276	0.994	-	0	ID=GTH_SGN_E_tom_exon_2;Parent=GTH_SGN_E_tom_gene_2_AGS_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	exon	13739	13853	1.000	-	0	ID=GTH_SGN_E_tom_exon_3;Parent=GTH_SGN_E_tom_gene_2_AGS_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	gene	23531	24847	.	-	0	ID=GTH_SGN_E_tom_gene_3
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	mRNA	23531	24847	.	-	0	ID=GTH_SGN_E_tom_gene_3_AGS_1;Parent=GTH_SGN_E_tom_gene_3
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	exon	24549	24847	1.000	-	0	ID=GTH_SGN_E_tom_exon_4;Parent=GTH_SGN_E_tom_gene_3_AGS_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	exon	24158	24478	1.000	-	0	ID=GTH_SGN_E_tom_exon_5;Parent=GTH_SGN_E_tom_gene_3_AGS_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	exon	23531	24077	0.998	-	0	ID=GTH_SGN_E_tom_exon_6;Parent=GTH_SGN_E_tom_gene_3_AGS_1
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	mRNA	24067	24689	.	-	0	ID=GTH_SGN_E_tom_gene_3_AGS_2;Parent=GTH_SGN_E_tom_gene_3
C07SLe0027C04.3	GenomeThreader_SGN_E_tomato	exon	24067	24689	1.000	-	0	ID=GTH_SGN_E_tom_exon_7;Parent=GTH_SGN_E_tom_gene_3_AGS_2
C07SLe0027C04.3	AUGUSTUS_tom_cdna	gene	23902	24573	1	-	.	ID=g1_1
C07SLe0027C04.3	AUGUSTUS_tom_cdna	transcript	23902	24573	.	-	.	ID=g1.t1_1;Parent=g1_1
C07SLe0027C04.3	AUGUSTUS_tom_cdna	stop_codon	23902	23904	.	-	0	Parent=g1.t1_1
C07SLe0027C04.3	AUGUSTUS_tom_cdna	CDS	23902	24077	.	-	2	ID=g1.t1.cds_1;Parent=g1.t1_1
C07SLe0027C04.3	AUGUSTUS_tom_cdna	CDS	24158	24478	.	-	2	ID=g1.t1.cds_2;Parent=g1.t1_1
C07SLe0027C04.3	AUGUSTUS_tom_cdna	CDS	24549	24573	.	-	0	ID=g1.t1.cds_3;Parent=g1.t1_1
C07SLe0027C04.3	AUGUSTUS_tom_cdna	start_codon	24571	24573	.	-	0	Parent=g1.t1_1
C07SLe0027C04.3	AUGUSTUS_tom_cdna	gene	24632	24759	1	-	.	ID=g2_1
C07SLe0027C04.3	AUGUSTUS_tom_cdna	transcript	24632	24759	.	-	.	ID=g2.t1_1;Parent=g2_1
C07SLe0027C04.3	AUGUSTUS_tom_cdna	stop_codon	24632	24634	.	-	0	Parent=g2.t1_1
C07SLe0027C04.3	AUGUSTUS_tom_cdna	CDS	24632	24759	.	-	2	ID=g2.t1.cds_1;Parent=g2.t1_1
C07SLe0027C04.3	AUGUSTUS_tom_ugs	gene	23902	24573	1	-	.	ID=g1_2
C07SLe0027C04.3	AUGUSTUS_tom_ugs	transcript	23902	24573	.	-	.	ID=g1.t1_2;Parent=g1_2
C07SLe0027C04.3	AUGUSTUS_tom_ugs	stop_codon	23902	23904	.	-	0	Parent=g1.t1_2
C07SLe0027C04.3	AUGUSTUS_tom_ugs	CDS	23902	24077	.	-	2	ID=g1.t1.cds_4;Parent=g1.t1_2
C07SLe0027C04.3	AUGUSTUS_tom_ugs	CDS	24158	24478	.	-	2	ID=g1.t1.cds_5;Parent=g1.t1_2
C07SLe0027C04.3	AUGUSTUS_tom_ugs	CDS	24549	24573	.	-	0	ID=g1.t1.cds_6;Parent=g1.t1_2
C07SLe0027C04.3	AUGUSTUS_tom_ugs	start_codon	24571	24573	.	-	0	Parent=g1.t1_2
C07SLe0027C04.3	GenomeThreader_SGN_U_tomato	match	7999	8382	0.935	+	0	ID=SGN-U602297_alignment_1;Target=SGN-U602297 1 384 +
C07SLe0027C04.3	GenomeThreader_SGN_U_tomato	match_part	7999	8382	0.935	+	0	ID=GTH_SGN_U_tom_match_part_1;Target=SGN-U602297 1 384 +;Parent=SGN-U602297_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_U_tomato	match	13660	16276	0.993	-	0	ID=SGN-U594039_alignment_1;Target=SGN-U594039 1 842 +
C07SLe0027C04.3	GenomeThreader_SGN_U_tomato	match_part	15629	16276	0.994	-	0	ID=GTH_SGN_U_tom_match_part_2;Target=SGN-U594039 1 648 +;Parent=SGN-U594039_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_U_tomato	match_part	13660	13853	0.990	-	0	ID=GTH_SGN_U_tom_match_part_3;Target=SGN-U594039 649 842 +;Parent=SGN-U594039_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_U_tomato	match	15689	16220	0.998	-	0	ID=SGN-U594017_alignment_1;Target=SGN-U594017 1 532 +
C07SLe0027C04.3	GenomeThreader_SGN_U_tomato	match_part	15689	16220	0.998	-	0	ID=GTH_SGN_U_tom_match_part_4;Target=SGN-U594017 1 532 +;Parent=SGN-U594017_alignment_1
C07SLe0027C04.3	GenomeThreader_SGN_U_tomato	gene	7999	8382	.	+	0	ID=GTH_SGN_U_tom_gene_1
C07SLe0027C04.3	GenomeThreader_SGN_U_tomato	mRNA	7999	8382	.	+	0	ID=GTH_SGN_U_tom_gene_1_AGS_1;Parent=GTH_SGN_U_tom_gene_1
C07SLe0027C04.3	GenomeThreader_SGN_U_tomato	exon	7999	8382	0.935	+	0	ID=GTH_SGN_U_tom_exon_1;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C07SLe0027C04.3	GenomeThreader_SGN_U_tomato	gene	13660	16276	.	-	0	ID=GTH_SGN_U_tom_gene_2
C07SLe0027C04.3	GenomeThreader_SGN_U_tomato	mRNA	13660	16276	.	-	0	ID=GTH_SGN_U_tom_gene_2_AGS_1;Parent=GTH_SGN_U_tom_gene_2
C07SLe0027C04.3	GenomeThreader_SGN_U_tomato	exon	15629	16276	0.994	-	0	ID=GTH_SGN_U_tom_exon_2;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C07SLe0027C04.3	GenomeThreader_SGN_U_tomato	exon	13660	13853	0.990	-	0	ID=GTH_SGN_U_tom_exon_3;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C07SLe0027C04.3	AUGUSTUS_tom_pot_cdna	gene	23902	24573	1	-	.	ID=g1_3
C07SLe0027C04.3	AUGUSTUS_tom_pot_cdna	transcript	23902	24573	.	-	.	ID=g1.t1_3;Parent=g1_3
C07SLe0027C04.3	AUGUSTUS_tom_pot_cdna	stop_codon	23902	23904	.	-	0	Parent=g1.t1_3
C07SLe0027C04.3	AUGUSTUS_tom_pot_cdna	CDS	23902	24077	.	-	2	ID=g1.t1.cds_7;Parent=g1.t1_3
C07SLe0027C04.3	AUGUSTUS_tom_pot_cdna	CDS	24158	24478	.	-	2	ID=g1.t1.cds_8;Parent=g1.t1_3
C07SLe0027C04.3	AUGUSTUS_tom_pot_cdna	CDS	24549	24573	.	-	0	ID=g1.t1.cds_9;Parent=g1.t1_3
C07SLe0027C04.3	AUGUSTUS_tom_pot_cdna	start_codon	24571	24573	.	-	0	Parent=g1.t1_3
C07SLe0027C04.3	AUGUSTUS_tom_pot_cdna	gene	24632	24759	1	-	.	ID=g2_2
C07SLe0027C04.3	AUGUSTUS_tom_pot_cdna	transcript	24632	24759	.	-	.	ID=g2.t1_2;Parent=g2_2
C07SLe0027C04.3	AUGUSTUS_tom_pot_cdna	stop_codon	24632	24634	.	-	0	Parent=g2.t1_2
C07SLe0027C04.3	AUGUSTUS_tom_pot_cdna	CDS	24632	24759	.	-	2	ID=g2.t1.cds_2;Parent=g2.t1_2
C07SLe0027C04.3	BLAST_ath_pep	match	7706	7840	37.0	+	0	ID=AT4G23160.1_fwd_alignment_1;blast_gaps=0;Target=AT4G23160.1 442 486 +;blast_match_length=134;blast_percent_identity=35.56;blast_mismatches=29;blast_evalue=1e-69
C07SLe0027C04.3	BLAST_ath_pep	match	32211	33185	181	-	0	ID=AT4G23160.1_fwd_alignment_2;blast_gaps=8;Target=AT4G23160.1 86 409 +;blast_match_length=-974;blast_percent_identity=36.58;blast_mismatches=201;blast_evalue=1e-54
C07SLe0027C04.3	BLAST_ath_pep	match	31832	31987	31.2	-	0	ID=AT4G23160.1_fwd_alignment_3;blast_gaps=2;Target=AT4G23160.1 485 544 +;blast_match_length=-155;blast_percent_identity=36.67;blast_mismatches=30;blast_evalue=1e-54
C07SLe0027C04.3	BLAST_ath_pep	match	31993	32202	46.6	-	0	ID=AT4G23160.1_fwd_alignment_4;blast_gaps=0;Target=AT4G23160.1 413 482 +;blast_match_length=-209;blast_percent_identity=37.14;blast_mismatches=44;blast_evalue=1e-54
C07SLe0027C04.3	BLAST_ath_pep	match	6693	7688	250	+	0	ID=AT4G23160.1_fwd_alignment_5;blast_gaps=3;Target=AT4G23160.1 101 434 +;blast_match_length=995;blast_percent_identity=39.58;blast_mismatches=199;blast_evalue=1e-69
C07SLe0027C04.3	BLAST_ath_pep	match	17443	18831	306	+	0	ID=AT4G23160.1_fwd_alignment_6;blast_gaps=7;Target=AT4G23160.1 44 511 +;blast_match_length=1388;blast_percent_identity=39.67;blast_mismatches=273;blast_evalue=6e-82
C07SLe0027C04.3	BLAST_ath_pep	match	31993	32235	48.1	-	0	ID=ATMG00810.1_fwd_alignment_1;blast_gaps=1;Target=ATMG00810.1 125 204 +;blast_match_length=-242;blast_percent_identity=32.10;blast_mismatches=55;blast_evalue=2e-22
C07SLe0027C04.3	BLAST_ath_pep	match	7706	7840	38.9	+	0	ID=ATMG00810.1_fwd_alignment_2;blast_gaps=0;Target=ATMG00810.1 164 208 +;blast_match_length=134;blast_percent_identity=33.33;blast_mismatches=30;blast_evalue=4e-24
C07SLe0027C04.3	BLAST_ath_pep	match	7218	7718	96.3	+	0	ID=ATMG00810.1_fwd_alignment_3;blast_gaps=3;Target=ATMG00810.1 3 167 +;blast_match_length=500;blast_percent_identity=36.90;blast_mismatches=105;blast_evalue=4e-24
C07SLe0027C04.3	BLAST_ath_pep	match	32211	32636	81.3	-	0	ID=ATMG00810.1_fwd_alignment_4;blast_gaps=5;Target=ATMG00810.1 1 131 +;blast_match_length=-425;blast_percent_identity=38.03;blast_mismatches=88;blast_evalue=2e-22
C07SLe0027C04.3	BLAST_ath_pep	match	17518	17862	105	+	0	ID=ATMG00820.1_fwd_alignment_1;blast_gaps=1;Target=ATMG00820.1 12 125 +;blast_match_length=344;blast_percent_identity=42.61;blast_mismatches=66;blast_evalue=2e-21