<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-07-24 20:52:27"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U568763" ref_strand="+" ref_description="SGN-U568763 Tomato 200607#2 [10 ESTs aligned] (*GB) gi|18417716|ref|NP_567864.1| (e_value=7e-62) expressed protein [Arabidopsis thaliana]; (*ATH) AT4G30996.1 (e_value=6e-64) | Symbol: None | expressed protein | chr4:15101366-15102690 FORWARD | Aliases: None; ">
      <seq>gatttactgtaagaccttcaagaaagtagatggaaagtagcagtactagttaattaatcagcacttattttcagctgaacatctttaacaatttgaaaaatcccaattaaccccataacagtagatccattttgccttgtagatctcactcccaatttgctctcaaagcaaaaaggaaacatggcaaggcaatctgggaattgcttaagatgttgtttagtaatttttgctgtagtttctgctctttgtgtatctggtcctgctatttattggaagttcaagaaacttaaagttaaagctgctcaatcttgtatgccttgtaaatgtgactgttctcctcctctttctttgcttgaagttgctcctggcttggcgaatcttacaatcacagactgcggaaaagatgatccggaccttaaggaggagatggagaaacagttcgttgatttattatcggaagagctgaaactgcaggaggctgttgacaaggagcacgcccatcatatgaacatcacctttgtggaggcgaggaggttagctaccgagtaccaaaaggaggctgagaaatgcattgctacaacggaaacttgtgaagtcgggagagaaagagctgttgtgttgtatgccaaggaaatgaagttgactaacctttgggaacgcagagcgcgccaagctggttggaaagactgaatgcaaaaatgaagttttcatcacactagctcaaattttgttgtccgctatgtagctttatgctagttatatttctctgtatgagcacaaaattgctcatatttcttcatctaatatatgtattttacctgctctcctgtgtaccttgccattatcatatgaaatataaacttccccactatagtttctatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="-" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="11140" stop="5410"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10841" g_stop="10475" g_length="367"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="367" r_length="367" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10474" i_stop="7140" i_length="3335">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7139" g_stop="7116" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="368" r_stop="391" r_length="24" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7115" i_stop="6201" i_length="915">
            <donor d_prob="0.996" d_score="0.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6200" g_stop="5710" g_length="491"/>
          <reference_exon_boundary r_type="cDNA" r_start="392" r_stop="882" r_length="491" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="-" ref_id="SGN-U568763" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>882</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U568763" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10841" e_stop="10475"/>
          <exon e_start="7139" e_stop="7116"/>
          <exon e_start="6200" e_stop="5710"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTACTGTAAGACCTTCAAGAAAGTAGATGGAAAGTAGCAGTACTAGTTAATTAATCAGCACTTATTTTCAGCTGAACATCTTTAACAATTTGAAAAATCCCAATTAACCCCATAACAGTAGATCCATTTTGCCTTGTAGATCTCACTCCCAATTTGCTCTCAAAGCAAAAAGGAAACATGGCAAGGCAATCTGGGAATTGCTTAAGATGTTGTTTAGTAATTTTTGCTGTAGTTTCTGCTCTTTGTGTATCTGGTCCTGCTATTTATTGGAAGTTCAAGAAACTTAAAGTTAAAGCTGCTCAATCTTGTATGCCTTGTAAATGTGACTGTTCTCCTCCTCTTTCTTTGCTTGAAGTTGCTCCTGGTATGTCATTTTTAGATCCAAGTTTATGCTTTATATTAAATAAAGATCATGTTTTTATAGTTTTTTTTTTGTTTGGGGTTTCTTTATTTGATTAAATAAAGAAATGGTGTTGATTTCATGCTCTGCTTGTCAAAAAGATCATGTTTTTAAGGTTTGTTGTTTGGTTTCCTTTTATGGGGTTCCTTTATTTGATTCGTTCTTTTGAATGGTGTTAGCTTTATTGTAAGTTTTGAGGTTCAAGTTTGGGGATCTTCTTGTCTTTGGTGAATTGGGGTTTTGAGCTGCTAAGATGGAATTAGAATTTCGAGTTTATGAGTTTTAGATTCTAGATGAGGTATAATGTAACCCCACCAGTGGGGTCTGGGGAGATTTTTGAGCGTATGCAGACCTTATCTCTACCGGAGGACGGAGGTAGAGAGACTGTTTTCGATAGACCTTAGGCTCAAGAAAAAAGAATTAACAGGAGTAAGTAAGTCATGTCAAAATACTATAAGAGATTCTAGAAATATAGCGGATCCAGATAAATTACTTGTACGTATTTTAGTGGATTTGTAAGCATAAAATAGTGGATTTGAACCAAAACTATCAAGAAACTTCACAGCAGCGCCTCCCCTGCTGAGCTGTCGTATGGACATCAATACTTGCTTATTTGGTTTTTTCTCATGTTGACCATTGGATTATGTGTTTATAATGTTAGATTGGCTGTAGATTTTCTGTTGTATGTGAAGAGTTTATTAAGTAACCTCTTAATTATCATGTTGATTGTTATCTTTTGCTTCAAACAAACTGCTGAAGTGCTCTTTGATTGCAAGTTTCGACCTATTTTTATGATCTACTTAACAAATTCTATCTTTTCTTTTATAGGTTTGTAACTTGGTTTTCATTTTTGGTTTTCTTTATTTGATTCATTCTTTTGGACGGTGTTATTTTTATTGCAAGTTTTGAGGGTTGTGTATCTTGTCTTTTGTGATTTGGGTTCCGGAGTTGTCATATGGACGTCAGTGCTTGTTTTCGGTATTTTCTCGGGTTGAGGTTGGACTGTGGGTTATAGAATTTTGGATTGACTGTAGATTTTCAATTGCATGTGAAGAGTTTATTAAGTGACCTCTTAATTGTCTTGTTCACTGTTATCTTCTGCTGCAAAAAAAAAAACCCTGCTCTTTGATTGCCAAGTTTCAGCCAATTGGTTCTTGCAAAGATAAGATCTCGGTGTAATGCTGATTGTAGCAATGTTATCGGATTTGATTTGCCTAAAGACCCTTCTGGTCCATCTCTTTTGCAGCATTGATTGTCTTCGAAAACATGACTTGCCTAGGTGGAAGTAAGTAAATAAAAAAGATTAGGAAGTGAATAGATATTTAATCCTGTCTGCAATATGGGATTTGGTCACTCTAATGATCTGAGGCTGATCAAATAACGAACTTGCTCCCCTCGTACCTTATCAAAAACTTGCTCCCCTTGCTTAAAGTGGGGATGAAGGTCTTACCTAAAAAAAATCAGACATTATTTTGATAAAATAAATTAGTAATCTTATGATTATTGCTTGAACTTAGTAAAGATTGAGGTCGGATAGGATGTAGTAGAAGCTCCAGAGAACTTTGATTGACACGCTCATGAAGGAAAATAGGAGAGTTGTGTCTACGTACTTTTGCACAAAAGCTCTCTGCTACATTTTTTCTTCCTGGTTTGGAAGCATGTTAATCAAGTCTCACCTTAAGTTTCTACCTTGTTGTCCCCATAATTAAGCAAACAATGAAAGATGAGCTTAGTAAAGATGTGATTTTTTGCTTATGTGGTAACAACGTACTAAAGGTTCGTGACAGGATGTATTCTGCTTTTGTGTTTGGGTTAAATCCACCGAACCAGAACAGATTAACAAATGCTTTCATTAAGTATCTTGTTCTTTATCCTCAAAAAAATTTAATTATCTTGTTCCTCATGCACCTTATCAGAAACTTGTTGCCTAGCAAAAAGTGGGGATGAAGGTCTTGCTTCTAAAGAATAAAGACATCATTTATGTAAAATAAATGGCTAATCTTACGACTATTGCTAGATCTTATCAACGATTGAGGTTTAGTAGAAGCTTAATAGAAGCTTTGATTGATAGGCTCTGACAAAATAAGTGAGCTCTGCTAGAGACTGTCACAAAGCTCTATGTTAGACATTTTTCCTTCATGGTTTTGGAGTTTATCGATCAAGCCTCACATCAAGTTTCTACTTTCCTAGCCCTATAGTTAAGCTAACTATGAATAAATGAGAGAATTCTTTCTGTCCCGTTGAACTGACAGTTCCTTCTAATTTTAGTGAAAAATGATCTGTGTAGACGATACCTACTGCTAGTTTTGGGTTGAGGCATAGTTATACTATTATAGTGTTTCAAGAATCCACCCTTGCTGAAAACTAAGGGCTGAAGGATGTAGAACTTTAATTACATGCAATATTTATTGTTTATGTTCTTTTCCGATACCTCTAAAAGCATGACCTGAAGTTCCCATCCTACATTGTACTTTTTAAAAAGTACCATGCAGAGTCTCCGTGCTGGATCAACTTTTCGATTCTTCTTGAGAAGCGGAGGTAATTCTGAAGAAGTACCGAGCACTAAATCTCCTCATTTGTTCTTTTTTTACCAACAAATGATACTTACAAACTTTACGTATTACATGTAATGAGGACATAATTGTTAGTAAACTGACATTAGGAATGGAATCCTTTCCTTTTCGCTTGGGATACTTACATACCCACTTATCTGTTTGGTGTTGCAATGTTCTTTTGTGTCCTATGTGAGTCTGGAGATCCTAAAATGACATTTAAGTAGAGAACACATTATATGATTGTTGGAGACTTCTTCATTGCGTTTGTCCTTTCGTATTCTTGTATAGTGCAAGTGCCGTCTTTATGCTTTTTTATACTTGGGCATATATCACGCTCCGAAGCTTATGATCATAATGACCTTATACTTTGTTGAAAAGGTTATTGTTGCTAGAGTTTAAGTAATATGCACCGTCTATGTAAATAAGGTATCTTATTTTCAACATCTCAAATCTCACATTTTAAGGAGGCTTACGTGTAGATAACCTTTGAATGACCTGATGGTGTAAATAGTTATTTATGTTTACAGTTTATAAAACTTTAAACTCATATTTCTATAGCTGGTCGAGGTGTTAAACTGAACTCCGTCACATGTGACATGCCTTCTTTATTGCTAGTTTTGGATATCTTTGTCTTTTGATATTTCAATTCTTGGTGAAAATTCTATAAATAATCATGTATAAGGTGCAGTTGATGAAGTTTCAATGCCAATAACATTGTCTTATTTTTGGTTTCCGCTTGTGCAGGCTTGGCGAATCTTACAATCACAGGTGTGCTTTCTAATTAAATTCCTCTTCACTATTTACCCGTTCTTCTTCTCTTCCAAAAAGAATCGCAAGTGACCTTGGATGTTTTTCTTCCCTTAATACAATTATTTCTAAGATTATGCAATACTGAAAGGCCTTTTGATGAATACAAAAAAATACAGTCCTCGAGAATTGAGGCCAATTAGATGATAGTGACAAACATCCCTAAATTGAATTTCACTTTGACGATGGATACTTAAACCTCTGAATGATTGAACCTAATCGAATTTGAGTTTTCCTTTTAAGTAGGTTCTGACTTGGAGATTCGATCCGTTAGATCTTTGGACCAAGCTACTTCATTAAATAAGCACTGTCTGACTATTAGCCTTCTATAGATGTGTTGCCTAGATTCTCTTTTATGTAGCTTGTCGTCCTATAGTTTATTTTGGACCCTCAGACGCGGTTATGAGCAAGTATAAAGTGTTTTAGTGCTAAAACCAGAAAGTCTCCGGAGTGAAAAAGACGAAGGAAACAAGACGATAGAAGCTACATTGGTTTAAGTAACACGCTCACAGATGCTCTATGTAATTTACAATGAAAGAAGTATGTTCCGCACCACAAAAACAGTTCAGAGATATTTGTTGTGATTTTCTCTTACCGTGTGTCTTCCACTTCTCCATATTACAAACTCAAAAATGTATTCATACTGCTCTTGCATGTAATGCTACTAGGAGCTTTGTTATCTAGAATCTATGTTGCTCGGACTCTCCTAAAATGTTGCCCCGTTTCGGAATCTCTAAAAAGTACTACTTATGGAGGATCCAGCACACACCCGGCAGCGTATTTGAATAGTCCGAGCGGCATAGTCTAGAACACATGCAAAAGATTGTTTTAAGCTCAAATGACATGCTACATAGTAATGTTTCCTATTGGCAACAGACTGCGGAAAAGATGATCCGGACCTTAAGGAGGAGATGGAGAAACAGTTCGTTGATTTATTATCGGAAGAGCTGAAACTGCAGGAGGCTGTTGACAAGGAGCACGCCCATCATATGAACATCACCTTTGTGGAGGCGAGGAGGTTAGCTACCGAGTACCAAAAGGAGGCTGAGAAATGCATTGCTACAACGGAAACTTGTGAAGTCGGGAGAGAAAGAGCTGTTGTGTTGTATGCCAAGGAAATGAAGTTGACTAACCTTTGGGAACGCAGAGCGCGCCAAGCTGGTTGGAAAGACTGAATGCAAAAATGAAGTTTTCATCACACTAGCTCAAATTTTGTTGTCCGCTATGTAGCTTTATGCTAGTTATATTTCTCTGTATGAGCACAAAATTGCTCATATTTCTTCATCTAATATATGTATTTTACCTGCTCTCCTGTGTACCTTGCCATTATCATATGAAATATAAACTTCCCCACTATAGTTTCTATG</genome_strand>
        <mrna_strand>GATTTACTGTAAGACCTTCAAGAAAGTAGATGGAAAGTAGCAGTACTAGTTAATTAATCAGCACTTATTTTCAGCTGAACATCTTTAACAATTTGAAAAATCCCAATTAACCCCATAACAGTAGATCCATTTTGCCTTGTAGATCTCACTCCCAATTTGCTCTCAAAGCAAAAAGGAAACATGGCAAGGCAATCTGGGAATTGCTTAAGATGTTGTTTAGTAATTTTTGCTGTAGTTTCTGCTCTTTGTGTATCTGGTCCTGCTATTTATTGGAAGTTCAAGAAACTTAAAGTTAAAGCTGCTCAATCTTGTATGCCTTGTAAATGTGACTGTTCTCCTCCTCTTTCTTTGCTTGAAGTTGCTCCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGGCGAATCTTACAATCACAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCGGAAAAGATGATCCGGACCTTAAGGAGGAGATGGAGAAACAGTTCGTTGATTTATTATCGGAAGAGCTGAAACTGCAGGAGGCTGTTGACAAGGAGCACGCCCATCATATGAACATCACCTTTGTGGAGGCGAGGAGGTTAGCTACCGAGTACCAAAAGGAGGCTGAGAAATGCATTGCTACAACGGAAACTTGTGAAGTCGGGAGAGAAAGAGCTGTTGTGTTGTATGCCAAGGAAATGAAGTTGACTAACCTTTGGGAACGCAGAGCGCGCCAAGCTGGTTGGAAAGACTGAATGCAAAAATGAAGTTTTCATCACACTAGCTCAAATTTTGTTGTCCGCTATGTAGCTTTATGCTAGTTATATTTCTCTGTATGAGCACAAAATTGCTCATATTTCTTCATCTAATATATGTATTTTACCTGCTCTCCTGTGTACCTTGCCATTATCATATGAAATATAAACTTCCCCACTATAGTTTCTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U597434" ref_strand="+" ref_description="SGN-U597434 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gcttgaacttagtaaagattgaggtcggataggatgtagtagaagctccagagaactttgattgacacgctcatgaaggaaaataggagagttgtgtctacgtacttttgcacaaaagctctctgctacattttttcttcctggtttggaagcatgttaatcaagtctcaccttaagtttctaccttgttgtccccataattaagcaaacaatgaaagatgagcttagtaaagatgtgattttttgcttatgtggtaacaacgtagtaaaggttcgtgacaggatgtattctgcttttgtgtttgggttaaatccaccgaaccagaacagattaacaaatgctttcattaagtatcttgttctttatcctcgaaaaaaaattaattatcttgttcctcatgcaccttatcagaaacttgttgcctagcaaaaagtggggatgaaggtcttgcttctaaaagaataaagacattatttatgtaaaataaatggctaatcttacgactattgctagatcttatcaacgattgaggtttagtagaagcttaatagaagctttgattgataggctctgacaaaataagtgagctctgctagagactgtcacaaagctctatgttagacatttttccttcatggttttggagtttatcgatcaagcctcacatcaagtttctactttcctagccctatagttaaagctaactatgaagaaatgagagaattcttctgtcccgttgaactgacagttccttctaattttagtgaaaaaggatctgtgtagacgatacctactgctagttttgggttgaggcatagttattactattatagtgtttcaagaatccccccttgctgaaaactaagggcctgaagatgtaaaactttatttacatgcaaaatttaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="-" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="9233" stop="7731"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8933" g_stop="8030" g_length="904"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="907" r_length="907" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="-" ref_id="SGN-U597434" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>904</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U597434" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8933" e_stop="8030"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTGAACTTAGTAAAGATTGAGGTCGGATAGGATGTAGTAGAAGCTCCAGAGAACTTTGATTGACACGCTCATGAAGGAAAATAGGAGAGTTGTGTCTACGTACTTTTGCACAAAAGCTCTCTGCTACATTTTTTCTTCCTGGTTTGGAAGCATGTTAATCAAGTCTCACCTTAAGTTTCTACCTTGTTGTCCCCATAATTAAGCAAACAATGAAAGATGAGCTTAGTAAAGATGTGATTTTTTGCTTATGTGGTAACAACGTACTAAAGGTTCGTGACAGGATGTATTCTGCTTTTGTGTTTGGGTTAAATCCACCGAACCAGAACAGATTAACAAATGCTTTCATTAAGTATCTTGTTCTTTATCCTC-AAAAAAATTTAATTATCTTGTTCCTCATGCACCTTATCAGAAACTTGTTGCCTAGCAAAAAGTGGGGATGAAGGTCTTGCTTCT-AAAGAATAAAGACATCATTTATGTAAAATAAATGGCTAATCTTACGACTATTGCTAGATCTTATCAACGATTGAGGTTTAGTAGAAGCTTAATAGAAGCTTTGATTGATAGGCTCTGACAAAATAAGTGAGCTCTGCTAGAGACTGTCACAAAGCTCTATGTTAGACATTTTTCCTTCATGGTTTTGGAGTTTATCGATCAAGCCTCACATCAAGTTTCTACTTTCCTAGCCCTATAGTT-AAGCTAACTATGAATAAATGAGAGAATTCTTTCTGTCCCGTTGAACTGACAGTTCCTTCTAATTTTAGTGAAAAATGATCTGTGTAGACGATACCTACTGCTAGTTTTGGGTTGAGGCATAGTTA-TACTATTATAGTGTTTCAAGAATCCACCCTTGCTGAAAACTAAGGGCTGAAGGATGTAGAACTTTAATTACATGCAATATTTAT</genome_strand>
        <mrna_strand>GCTTGAACTTAGTAAAGATTGAGGTCGGATAGGATGTAGTAGAAGCTCCAGAGAACTTTGATTGACACGCTCATGAAGGAAAATAGGAGAGTTGTGTCTACGTACTTTTGCACAAAAGCTCTCTGCTACATTTTTTCTTCCTGGTTTGGAAGCATGTTAATCAAGTCTCACCTTAAGTTTCTACCTTGTTGTCCCCATAATTAAGCAAACAATGAAAGATGAGCTTAGTAAAGATGTGATTTTTTGCTTATGTGGTAACAACGTAGTAAAGGTTCGTGACAGGATGTATTCTGCTTTTGTGTTTGGGTTAAATCCACCGAACCAGAACAGATTAACAAATGCTTTCATTAAGTATCTTGTTCTTTATCCTCGAAAAAAAATTAATTATCTTGTTCCTCATGCACCTTATCAGAAACTTGTTGCCTAGCAAAAAGTGGGGATGAAGGTCTTGCTTCTAAAAGAATAAAGACATTATTTATGTAAAATAAATGGCTAATCTTACGACTATTGCTAGATCTTATCAACGATTGAGGTTTAGTAGAAGCTTAATAGAAGCTTTGATTGATAGGCTCTGACAAAATAAGTGAGCTCTGCTAGAGACTGTCACAAAGCTCTATGTTAGACATTTTTCCTTCATGGTTTTGGAGTTTATCGATCAAGCCTCACATCAAGTTTCTACTTTCCTAGCCCTATAGTTAAAGCTAACTATGAAGAAATGAGAGAATTC-TTCTGTCCCGTTGAACTGACAGTTCCTTCTAATTTTAGTGAAAAAGGATCTGTGTAGACGATACCTACTGCTAGTTTTGGGTTGAGGCATAGTTATTACTATTATAGTGTTTCAAGAATCCCCCCTTGCTGAAAACTAAGGGCCTGAAGATGTAAAACTTTATTTACATGCAAAATTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U603277" ref_strand="+" ref_description="SGN-U603277 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gggaattagaatttcgagtttatgagttttagattctagatgaggtataatgtaaccccaccagtggggtctggggagatttttgagcgtatgcagaccttatctctaccggaggacggaggtagagagactgttttcgatagaccttaggctcaagaaaaaagaattaacaggagtaagtaagtcatgtcaaaatactataagagattctagaaatatagcggatccagataaattacttgtacgtattttagtggatttgtaagcataaaatagtggatttgaaccaaaactatcaagaaacttcacagcagcgcctcccctgctgagctgtcgtatggacatcaatacttgcttatttggttttttctcatgttgaccattggattatgtgtttataatgttagattggctgtagattttctgttgtatgtgaagagtttattaagtaacctcttaattatcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="-" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="10483" stop="9417"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10184" g_stop="9717" g_length="468"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="468" r_length="468" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="-" ref_id="SGN-U603277" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>468</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U603277" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10184" e_stop="9717"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAATTAGAATTTCGAGTTTATGAGTTTTAGATTCTAGATGAGGTATAATGTAACCCCACCAGTGGGGTCTGGGGAGATTTTTGAGCGTATGCAGACCTTATCTCTACCGGAGGACGGAGGTAGAGAGACTGTTTTCGATAGACCTTAGGCTCAAGAAAAAAGAATTAACAGGAGTAAGTAAGTCATGTCAAAATACTATAAGAGATTCTAGAAATATAGCGGATCCAGATAAATTACTTGTACGTATTTTAGTGGATTTGTAAGCATAAAATAGTGGATTTGAACCAAAACTATCAAGAAACTTCACAGCAGCGCCTCCCCTGCTGAGCTGTCGTATGGACATCAATACTTGCTTATTTGGTTTTTTCTCATGTTGACCATTGGATTATGTGTTTATAATGTTAGATTGGCTGTAGATTTTCTGTTGTATGTGAAGAGTTTATTAAGTAACCTCTTAATTATCATG</genome_strand>
        <mrna_strand>GGGAATTAGAATTTCGAGTTTATGAGTTTTAGATTCTAGATGAGGTATAATGTAACCCCACCAGTGGGGTCTGGGGAGATTTTTGAGCGTATGCAGACCTTATCTCTACCGGAGGACGGAGGTAGAGAGACTGTTTTCGATAGACCTTAGGCTCAAGAAAAAAGAATTAACAGGAGTAAGTAAGTCATGTCAAAATACTATAAGAGATTCTAGAAATATAGCGGATCCAGATAAATTACTTGTACGTATTTTAGTGGATTTGTAAGCATAAAATAGTGGATTTGAACCAAAACTATCAAGAAACTTCACAGCAGCGCCTCCCCTGCTGAGCTGTCGTATGGACATCAATACTTGCTTATTTGGTTTTTTCTCATGTTGACCATTGGATTATGTGTTTATAATGTTAGATTGGCTGTAGATTTTCTGTTGTATGTGAAGAGTTTATTAAGTAACCTCTTAATTATCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U576504" ref_strand="+" ref_description="SGN-U576504 Tomato 200607#2 [6 ESTs aligned] (*GB) gi|157328724|emb|CAO22747.1| (e_value=3e-105) unnamed; (*ATH) AT2G24280.1 (e_value=3e-97) | Symbol: None | serine carboxypeptidase S28 family protein, contains Pfam profile: PF05577 Serine carboxypeptidase S28 | chr2:10340364-10344161 FORWARD | Aliases: F27D4.19, F27D4_19; (*SWP) sp|Q2TA14|PCP_BOVIN (e_value=4e-48) Lysosomal Pro-X carboxypeptidase OS=Bos taurus GN=PRCP; ">
      <seq>attaaagttagtaaacttttcagaacttgcaaggctttacaatcagttttttcagctagagattggctatgggaagcttttgtatacacagctatggttaattatcctactgaggctaactttatgatgccattgccagcatatccagttaaagagatgtgcaagataattgatggattgccaaaaggaggttcaaagcttagcaaggcatttgctgcagcaagtttatattacaattatacacaaacagaaaaatgtttcaatttagaaggtggtactgattctcatggtcttcatggttgggattggcaggcatgtacagagatggttatgccaatgacttgttcaaatgaaagtatgtttcctccatcttcctttagctacaaggaattctcaaaagattgtaagaagcaatttggagtaaaacctagaccacattggatcactactgaatttggtggctatagaattgagcaagttctcaagagatttggcagcaacatgatattctctaatggaatgcaagatccttggagcagaggaggtgtattgaaaaatatatcatctagcattgtggctttggtaactcagaaaggtgcacaccatgttgactttagatcagagacaaagaatgacccagactggttaattatgcaaaggaagcaagaagtggctattattgaaaagtggctagaagagtactataaagatctcaaacaaaattagatacaatatgaatatagtgtcactttagacacatcatgtaatggacattattgtggaagaaaataaaaaggtgtcataaattaaattgaattatattaatttgagttttatttctataggttaatcttttgaaaaaaaatatatacgagatatatatgtattttgaataggtatatatttttaatatacttatctaaattttcact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="-" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="14154" stop="11072"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13854" g_stop="13823" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="32" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13822" i_stop="13591" i_length="232">
            <donor d_prob="0.995" d_score="0.00"/>
            <acceptor a_prob="0.885" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13590" g_stop="13467" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="156" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="13466" i_stop="12970" i_length="497">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.886" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12969" g_stop="12814" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="157" r_stop="312" r_length="156" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="12813" i_stop="12730" i_length="84">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12729" g_stop="12577" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="465" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="12576" i_stop="12262" i_length="315">
            <donor d_prob="0.830" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="12261" g_stop="12182" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="466" r_stop="545" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="12181" i_stop="11869" i_length="313">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="11868" g_stop="11819" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="546" r_stop="595" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="11818" i_stop="11709" i_length="110">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="11708" g_stop="11372" g_length="337"/>
          <reference_exon_boundary r_type="cDNA" r_start="596" r_stop="932" r_length="337" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="-" ref_id="SGN-U576504" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>932</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U576504" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13854" e_stop="13823"/>
          <exon e_start="13590" e_stop="13467"/>
          <exon e_start="12969" e_stop="12814"/>
          <exon e_start="12729" e_stop="12577"/>
          <exon e_start="12261" e_stop="12182"/>
          <exon e_start="11868" e_stop="11819"/>
          <exon e_start="11708" e_stop="11372"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTAAAGTTAGTAAACTTTTCAGAACTTGCAAGTAAGTCTCTCTTAATATAAAATTTTATTTTGTCATTTAAGCTCATATCATGTTATCAATATAATAATTAATTTAAGAAGATTCATTATGAATTAATCAATTCTACATTAGCTAGTTGTCTATCTATCGTAACCCTCCTTTATTTGGCTTTGGAACAGACATTATAATAAGTAAGCTCAAACTGACGGAATTAAGAAGTGATATGTGTTTAACATATTTATATAAATTTCAGGGCTTTACAATCAGTTTTTTCAGCTAGAGATTGGCTATGGGAAGCTTTTGTATACACAGCTATGGTTAATTATCCTACTGAGGCTAACTTTATGATGCCATTGCCAGCATATCCAGTTAAAGAGGTACACATAATATAGCAAATTAGTTATTATTTTTTTATCAATTTATCACTTACAAATAATTTACTTGTAATGATCGACTTACTAAGTTTCTCGAATAAAATGAAAGTCACTCTGATTTAAGAGGTGTCAATTGAAAATTACATGCGAATAAACAATTTCTTATGGCATGTTCTTCTTTTGTTGGATTTTTGATTATATATACCAACAATATGAATATTGTTCGCCTGATTAGTGTAGCTCAACATATTATTAACATAATATAATGGACTAGTTATTATTTTTATACTTCGTTGCGAATAATTTACTTGTAATAGTGACATGTTTTTATAAAAATTTACTTATAAAGATCGACTGATTGTAATAAAAGTCACTCTTATTCAAGGGGTGTCAACTGAAAATTATCACGTGATAGACAATTCTATATATATACTAAATGTTTACTTTTTTCGTGCGTTTACTTCTTTATTTTATTTTTTTGAATTTATTGTTGAATTAAGATGTGCAAGATAATTGATGGATTGCCAAAAGGAGGTTCAAAGCTTAGCAAGGCATTTGCTGCAGCAAGTTTATATTACAATTATACACAAACAGAAAAATGTTTCAATTTAGAAGGTGGTACTGATTCTCATGGTCTTCATGGTTGGGATTGGCAGGTATATAAAAACTTTACATAATACACATTTTATTTATCTTTCTTGTACGTGTCAGTGACATATTTAGAATTTATTCGTTTTCAGGCATGTACAGAGATGGTTATGCCAATGACTTGTTCAAATGAAAGTATGTTTCCTCCATCTTCCTTTAGCTACAAGGAATTCTCAAAAGATTGTAAGAAGCAATTTGGAGTAAAACCTAGACCACATTGGATCACTACTGAATTTGGTGGCTATGTGAGTTTTCATCCTTTTTTTCATCTGATATTTGATATTCGTAAAGGATATACATAGAAAGAGAGATTACTCCCACTTTCTTTTATATTCTTTATGTTGTAAGACATGTACGAACGTTCTTCACAACCATTAAAAATAGTAGAAAAATGATAAATACTATTTCATTTTAAAATTCTCGAATATGAACACTTTATAATGGGTAGATATCAAATTTTAGAGAAAAGTATTTTTAAAAAATGTTCATGACATATTTTTGATTTCAATATAATAAGATTCTAAAATATGTCTATAATTTCTCTTTTTTTATAATATCAGAGAATTGAGCAAGTTCTCAAGAGATTTGGCAGCAACATGATATTCTCTAATGGAATGCAAGATCCTTGGAGCAGAGGAGGGTAAGTTAATGAGAGTATTATAACTTTTTATTTATACTGATAATATAAATAATTTTTACATTATCAATTAACTTAACAATGATTATCAATATCGTCTATCAAAAATAGAAATAATAACATAAAAAGATAAAACAAGTTATCTACTATAATTGATAAGTAGCTTTTGATTTGAAACGTATACACATGAGATTTTTTTTAGTTAAAAATATATAAATGAAATAAAAACATATTTAGTATGATTTAGCAAACGTTAAATTTTGAATTTGCCTTTCGAAATTGATTATTTTTGTTTCCATTCTTCTTTTTATGACAGTGTATTGAAAAATATATCATCTAGCATTGTGGCTTTGGTAACTCAGAAAGGTATATAATATGCTTTCGTATATCATTATTTTAATTGAATTAAACTTAGAGATATTGATTTATTTTATTATTATTAATTTCATAAATATTTTTTTTTTGTAATTAATTAGGTGCACACCATGTTGACTTTAGATCAGAGACAAAGAATGACCCAGACTGGTTAATTATGCAAAGGAAGCAAGAAGTGGCTATTATTGAAAAGTGGCTAGAAGAGTACTATAAAGATCTCAAACAAAATTAGATACAATATGAATATAGTGTCACTTTAGACACATCATGTAATGGACATTATTGTGGAAGAAAATAAAAAGGTGTCATAAATTAAATTGAATTATATTAATTTGAGTTTTATTTCTATAGGTTAATCTTTTGAAAAAAAATATATACGAGATATATATGTATTTTGAATAGGTATATATTTTTAATATACTTATCTAAATTTTCACT</genome_strand>
        <mrna_strand>ATTAAAGTTAGTAAACTTTTCAGAACTTGCAA........................................................................................................................................................................................................................................GGCTTTACAATCAGTTTTTTCAGCTAGAGATTGGCTATGGGAAGCTTTTGTATACACAGCTATGGTTAATTATCCTACTGAGGCTAACTTTATGATGCCATTGCCAGCATATCCAGTTAAAGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGCAAGATAATTGATGGATTGCCAAAAGGAGGTTCAAAGCTTAGCAAGGCATTTGCTGCAGCAAGTTTATATTACAATTATACACAAACAGAAAAATGTTTCAATTTAGAAGGTGGTACTGATTCTCATGGTCTTCATGGTTGGGATTGGCAG....................................................................................GCATGTACAGAGATGGTTATGCCAATGACTTGTTCAAATGAAAGTATGTTTCCTCCATCTTCCTTTAGCTACAAGGAATTCTCAAAAGATTGTAAGAAGCAATTTGGAGTAAAACCTAGACCACATTGGATCACTACTGAATTTGGTGGCTAT...........................................................................................................................................................................................................................................................................................................................AGAATTGAGCAAGTTCTCAAGAGATTTGGCAGCAACATGATATTCTCTAATGGAATGCAAGATCCTTGGAGCAGAGGAGG.........................................................................................................................................................................................................................................................................................................................TGTATTGAAAAATATATCATCTAGCATTGTGGCTTTGGTAACTCAGAAAG..............................................................................................................GTGCACACCATGTTGACTTTAGATCAGAGACAAAGAATGACCCAGACTGGTTAATTATGCAAAGGAAGCAAGAAGTGGCTATTATTGAAAAGTGGCTAGAAGAGTACTATAAAGATCTCAAACAAAATTAGATACAATATGAATATAGTGTCACTTTAGACACATCATGTAATGGACATTATTGTGGAAGAAAATAAAAAGGTGTCATAAATTAAATTGAATTATATTAATTTGAGTTTTATTTCTATAGGTTAATCTTTTGAAAAAAAATATATACGAGATATATATGTATTTTGAATAGGTATATATTTTTAATATACTTATCTAAATTTTCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U585376" ref_strand="+" ref_description="SGN-U585376 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|118487801|gb|ABK95724.1| (e_value=4e-103) unknown; (*ATH) AT2G24280.1 (e_value=2e-97) | Symbol: None | serine carboxypeptidase S28 family protein, contains Pfam profile: PF05577 Serine carboxypeptidase S28 | chr2:10340364-10344161 FORWARD | Aliases: F27D4.19, F27D4_19; (*SWP) sp|P42785|PCP_HUMAN (e_value=1e-57) Lysosomal Pro-X carboxypeptidase OS=Homo sapiens GN=PRCP; ">
      <seq>gataaagttagcctaagaaaaagacacaagtcacaagttgatgaataaataaatcattatcatcttcatcaagaaaataagattatttttttttatatctatggcttctttttcttcttacattttcttgattatattgttcataatttctgttggtgtttcagaaattaagtcaatatatcttccaggaacttatcaatcttcattactagtaaagaaacatgatgaaaagacaaaaataccctttaaaactcattattttccacaaattcttgatcatttcacttttctaccaaagagttgtaaagtattttatcaaaaatatctcataaatgatcaatattggaataaagatggaggagggcccatctttgtttacactggcaatgaagggaatattgattggtttgcagcaaacactggattcatgattgatattgctccgaactttaatgcactcctgatcttcatcgaacataggttttatggagattcaatgccatttggaaataattcttacaaatcagcaaagactttgggttacttgaattcacaacaagcattggctgattatgctgtcctcataaggagcttgaagcaaaatctttcttctgattcatcacctgttgtggtttttggtggctcttatggtggaatgttggctgcttggtttagactaaagtatccacatatagccattggagcagtggcatcttcagcaccaatattgcaatttgaaaaaatcacaccatggtcaagcttctatgatgctgtttcccaagatttcaaggatgcaagtttgaattgttataaagtgataaaggcgagttgggcagagttggatgcattatcaagacatgatgatggattgatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="-" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="16444" stop="13552"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16145" g_stop="15672" g_length="474"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="475" r_length="475" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15671" i_stop="15326" i_length="346">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.392" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15325" g_stop="15145" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="476" r_stop="656" r_length="181" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15144" i_stop="14476" i_length="669">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14475" g_stop="14342" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="657" r_stop="790" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14341" i_stop="13936" i_length="406">
            <donor d_prob="0.878" d_score="1.00"/>
            <acceptor a_prob="0.937" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13935" g_stop="13852" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="791" r_stop="874" r_length="84" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="-" ref_id="SGN-U585376" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>873</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U585376" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16145" e_stop="15672"/>
          <exon e_start="15325" e_stop="15145"/>
          <exon e_start="14475" e_stop="14342"/>
          <exon e_start="13935" e_stop="13852"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATAAAGTTAGCCTAAGAAAAAGACACAAGTCACAAGTTGATGAATAAATAAATCATTATCATCTTCATCAAGAAAATAAGATTA-TTTTTTTTATATCTATGGCTTCTTTTTCTTCTTACATTTTCTTGATTATGTTGTTCATAATTTCTGTTGGTGTTTCAGAAATTAAGTCAATATATCTTCCAGGAACTTATCAATCTTCATTACTAGTAAAGAAACATGATGAAAAGACAAAAATACCCTTTAAAACTCATTATTTTCCTCAAATTCTTGATCATTTCACTTTTCTACCAAAGAGTTGTAAAGTATTTTATCAAAAATATCTCATAAATGATCAATATTGGAATAAAGATGGAGGAGGGCCCATCTTTGTTTACACTGGCAATGAAGGGAATATTGATTGGTTTGCAGCAAATACTGGATTCATGATTGATATTGTTCCGAACTTTAATGCACTCCTGATCTTCATCGAAGTATGTGCATTAAACTTTACTTTATATTATGATTTAGAAGATAATCTTTTGTGTTACCAAAGCTCTCGAAAAGAAGATTCATTTGAATCTCTTTCATCAGAAATCAAGTTGTATATATAAGTTTTTCCTTTTATGTTTCTCGGTAAATATTTACCACTTTCTCCAAATACAGTAGAATTTTGCATAAATAAAAAACTATATATTAGCTGCAAGAGCATACATTAACGCAAGGCGCAGTAGAGGATAAAATTCGTATTTTTTATTCTATTTTATTTTATTTTTGTTTATCTTTTTAGTGGGATGATATTGATAGTGTTTTTTTTGTTTTTGTATTGGAATATTTTAGCATAGGTTTTATGGAGATTCAATGCCATTTGGAAATAATTCTTACAAATCAGCAAAGACTTTGGGTTACTTGAATTCACAACAAGCATTGGCTGATTATGCTGTCCTCATAAGGAGCTTGAAGCAAAATCTTTCTTCTGATTCATCACCTGTTGTGGTTTTTGGTGGCTCTTATGGTGGAAGTAAGTAATTTAAATTAAGAAAAAAAGTAACATCATTTTGCGGACTAAGTTATCTAAATTTAATCATAATTTTTAGATTTATTTTGAACGATATACAATATAAATTTTGTCCTAAACTTAATATATTATAAAATATTTTATCTAATCATCTTATCTCATGAACCAAACGATCCTAAAATTGACAAAAAGAAAAGTAATACTTAAATGAGAAAGTTCCAACTTTTAGTTTTATCTTTTGTCTTGATATATTATAAATGGAAATGACATGACATGTTACATTAGTGGACTTATTGATAAAAATCCACATTTTAAAAAAAGTGAGAACTTATATTTTATGGTTGCTAAACAACTTTTCTTCTACTTAATTACTGCATTTGTTTTTGTATTCAAGAAGTATATACATAAACAAAGAGAATACAAGAATAAATTATTTTGCCTTGGTATATATAGTATACCTTCTTTTTGTGATACTGTTACTATGTTTTTTTCCCCAATATTTTGAATTATCAAATATTGTGACGTAAATATTTATTATGTAACTTTGTGTTCCAATTTACATCAACGGTTAGTTATTTTGATACTTGTACTTTGAATTATATCACGTAAAGTGAAACGAGCGTTTGTTTATTGTTTCTCTTTTGACTATTTGCTTTTTTTTTGGTCAATCAGTGTTGGCTGCTTGGTTTAGACTAAAGTATCCACATATAGCCATTGGAGCAGTGGCATCTTCAGCACCAATATTGCAATTTGAAAAAATCACACCATGGTCAAGCTTCTATGATGCTGTTTCCCAAGATTTCAAGGTTTGTGATACTCATGAGGCTTAGGAATTGATGGACCTATAATCGTGTTATTCAGATCAATTTTGTTTTTACGTAGTATATCATATATATGTATGTATTATACAAGATGAGCCACGATTCAACCCTCATGTCTGTGCCACTGATCCAAACTCATGCATGCTCCTTTTTAGAATAGGAGTTAACTTATATATATTAACAATATATAGACGATAAATTTATGCAATCTGAATTTAACTAAACTATTTGTATTCACCTCTATTGAAGTGTAAATGATTTTTAATGCTATTCGTATTTTTTAACCTATCATAACAAATATTTTATCTTATTATTTTTAGATTAAGAGTTTTACTTATTATAAATGATTTACTAATATTAATTTATCTTTATTTTTTTCCTCATAAAATAGGATGCAAGTTTGAATTGTTATAAAGTGATAAAGGGGAGTTGGGCAGAGTTGGATGCATTATCAAGACATGATGATGGATTGATT</genome_strand>
        <mrna_strand>GATAAAGTTAGCCTAAGAAAAAGACACAAGTCACAAGTTGATGAATAAATAAATCATTATCATCTTCATCAAGAAAATAAGATTATTTTTTTTTATATCTATGGCTTCTTTTTCTTCTTACATTTTCTTGATTATATTGTTCATAATTTCTGTTGGTGTTTCAGAAATTAAGTCAATATATCTTCCAGGAACTTATCAATCTTCATTACTAGTAAAGAAACATGATGAAAAGACAAAAATACCCTTTAAAACTCATTATTTTCCACAAATTCTTGATCATTTCACTTTTCTACCAAAGAGTTGTAAAGTATTTTATCAAAAATATCTCATAAATGATCAATATTGGAATAAAGATGGAGGAGGGCCCATCTTTGTTTACACTGGCAATGAAGGGAATATTGATTGGTTTGCAGCAAACACTGGATTCATGATTGATATTGCTCCGAACTTTAATGCACTCCTGATCTTCATCGAA..........................................................................................................................................................................................................................................................................................................................................................CATAGGTTTTATGGAGATTCAATGCCATTTGGAAATAATTCTTACAAATCAGCAAAGACTTTGGGTTACTTGAATTCACAACAAGCATTGGCTGATTATGCTGTCCTCATAAGGAGCTTGAAGCAAAATCTTTCTTCTGATTCATCACCTGTTGTGGTTTTTGGTGGCTCTTATGGTGGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGGCTGCTTGGTTTAGACTAAAGTATCCACATATAGCCATTGGAGCAGTGGCATCTTCAGCACCAATATTGCAATTTGAAAAAATCACACCATGGTCAAGCTTCTATGATGCTGTTTCCCAAGATTTCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................GATGCAAGTTTGAATTGTTATAAAGTGATAAAGGCGAGTTGGGCAGAGTTGGATGCATTATCAAGACATGATGATGGATTGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U574515" ref_strand="+" ref_description="SGN-U574515 Tomato 200607#2 [23 ESTs aligned] (*GB) gi|4097579|gb|AAD00116.1| (e_value=4e-109) NTGP1 [Nicotiana tabacum]; (*ATH) AT5G58060.1 (e_value=4e-99) | Symbol: None | SNARE protein-related, similar to SNARE protein Ykt6 (Homo sapiens) GI:2507637 | chr5:23515373-23517566 FORWARD | Aliases: K21L19.5, K21L19_5; (*SWP) sp|Q9ZRD6|YKT61_ARATH (e_value=4e-98) VAMP-like protein YKT61 OS=Arabidopsis thaliana GN=YKT61; ">
      <seq>tctctctctctcttttttttcctttttcttattcttattccttctccattaaataatgaatagcaataaaataaaataaaataaatagtaataaaattcaacacatcgcgtaatctgaagaagaatcagttctattccttcgaaggcggccatagaagagaggaaaaaaaaaattctttgaaatttattttggtgtttttggataattttttgaagaagtttgagaggtttagagagaaaaacagagatgaagatcacagctttgatggtgttgaaatgcaatccagaaggttcggatcctgtgatcttagcaaacgcttctgatgttaaccattttgggtattttcagagatccagcgttaaggaatttatcgtttttgtgggtcgaactgttgctaaaaggaacccacctggacaacgacaatctgttcagcatgaagaatacaaggtgcattcatacaatcgaaatggtttatgtgctttgggcttcatggatgatcactatccagttcgaagtgcattttcactgctcaaccaggttttggatgagtatctgaagaattttggtgagtcatggaagacggctcaatgcgacaatgctcaaccatggccttatctgaatgaagctctagccaaatttcaggatcctgctgaggccgataagctgttcaaaattcaacgagagttggatgaaacaaaaattattctccataagacaattgacagtgtcttagaacgtggtgagaagctagacagtttggttgagaagagttcagatctcagtgctgcttcacagatgttctacaagcaggcaaagaaaaccaattcatgctgtacaattttatagactgttttctgaagatggaagggggcgattcaaccacggataaacttgtgtctatgttgcatatgaagtatcggagaattgtttgtttatatcatccatgatattctataagcttgaattctttttgttctctattgtaatatgatctcagatgaagagaaaaagtcagtctcagattgatagatcttgtttgaaagttgtgatgtgatgatgttcacctaaatgtagttacaatataacatatttcctgtttcgaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="+" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="18668" stop="23247"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18968" g_stop="19406" g_length="439"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="440" r_length="440" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19407" i_stop="20300" i_length="894">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.683" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20301" g_stop="20398" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="441" r_stop="538" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="20399" i_stop="20490" i_length="92">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="20491" g_stop="20595" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="539" r_stop="643" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="20596" i_stop="20710" i_length="115">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="20711" g_stop="20776" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="644" r_stop="709" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="20777" i_stop="21748" i_length="972">
            <donor d_prob="0.910" d_score="1.00"/>
            <acceptor a_prob="0.891" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="21749" g_stop="21835" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="710" r_stop="796" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="21836" i_stop="22640" i_length="805">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="22641" g_stop="22944" g_length="304"/>
          <reference_exon_boundary r_type="cDNA" r_start="797" r_stop="1101" r_length="305" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1103" polyA_stop="1116"/>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="+" ref_id="SGN-U574515" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>1099</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U574515" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18968" e_stop="19406"/>
          <exon e_start="20301" e_stop="20398"/>
          <exon e_start="20491" e_stop="20595"/>
          <exon e_start="20711" e_stop="20776"/>
          <exon e_start="21749" e_stop="21835"/>
          <exon e_start="22641" e_stop="22944"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCTCTCTCTCTTTTTTTTCCTTTTTCTTATTCTTATTCCTTCTCCATTAAATAATTAATAGCAATAAAATAAAATAAAATAAATAGTAATAAAATTCAACACATCGCGTAATCTGAAGAAGAATCAGTTCTATTCCTTCGAAGGCGGCCATAGAAGAGAGG-AAAAAAAAATTCTTTGAAATTTATTTTGGTGTTTTTGGATAATTTTTTGAAGAAGTTTGAGAGGTTTAGAGAGAAAAACAGAGATGAAGATCACAGCTTTGATGGTGTTGAAATGCAATCCAGAAGGTTCGGATCCTGTGATCTTAGCAAACGCTTCTGATGTTAACCATTTTGGGTATTTTCAGAGATCCAGCGTTAAGGAATTTATCGTTTTTGTGGGTCGAACTGTTGCTAAAAGGAACCCACCTGGACAACGACAATCTGTTCAGCATGAAGGTTTGATTTTTCCAACACCCTTTTGGTTGATTTGGTTATGGGGTTGTCTTATCTTGGTTTTGGGGAATCAAATATGTTGTTTGGTTTTGGTGGAATTGTAGATGTCTTGTGGATTGATGATTTTTTTGTTTTTTATTGGATGTTTGGATTTGTGATATTAGGTAGGTTGCAGCTCAATTTGCTGTTTCTATTGGTAAAGTGTATAGATGGATGAGTAATGTTGCAAAGTTAGACAAAAAAAGTAGGATTTCTTCCCATCTGTTTTAGCTTTGTAGATAATTGAATATAGTTAGCTGGTACCTATGGCTGGAGGGAGGTGGCAGGTACCTGTATTCAAGGTGCGTGCAAGTGAGCATAGACACCGATCGTTATGAAAAAAGATGCAAGCTTGTGGTCCTATAGGTGCTCCTGATGCTTTGAGTCTTGCATTTTGTGATTTTCTGTTTTCATTTCTCTTTTTCTTTTTTTTGTGTTTTGGGGATGGTTTTGCACAAAAGTTTATCAATAACCTCAAGGTACATGTTACCCTACCCAGAAGCCACTTTTTTGAACTACACGGGGTATGTTGTCCTTGTACAAAAGTAGAAGGATGAATGAAGTGTTGACTAGCTTGGTTGGGAAAATTGTTATGTTTAACGAATTGATCTTTTTCAGTTATATTTCTTGAAGTCTTCACATGCTTACACAAGTAATGTTAATCGGTGTTCTTGATATATATCAACTAGTGTAGGATATAAAAATTTGGTGGATTGGTTCTCAATCACAGCCTCTAGCACAAAGTAGTGATTTTTAAGTCGTATTTGATCTATATACCGACCCAATGGTATACTCCTCGATTGTGTTTTGGTCACACATACACCAGTTTTGACTTTTTTTTTTTTTTTTTTACCTTAGAATACAAGGTGCATTCATACAATCGAAATGGTTTATGTGCTTTGGGCTTCATGGATGATCACTATCCAGTTCGAAGTGCATTTTCACTGCTCAACCAGGTATAGGCTCTTTATTATAGATATTCATCTTTGAGAGGAGAAACTCTATATATGGAGAAATCAAATTATGGATCTGCATCTCATTTTTCCAGGTTTTGGATGAGTATCTGAAGAATTTTGGTGAGTCATGGAAGACGGCTCAATGCGACAATGCTCAACCATGGCCTTATCTGAATGAAGCTCTAGCCAAATTTCAGGTTCCCCTTCTGTTTTTGTTTTCTGGGTGATGATGGAATTTCATTTTCAATCAAATTCTTCCCACTTTCATCTTAAAACAATTGACGTTTGAGCTGATCATGTTGACCCCTACAGGATCCTGCTGAGGCCGATAAGCTGTTCAAAATTCAACGAGAGTTGGATGAAACAAAAATTATTCTCGTAAGTATTGTGTTATTCTCATGATTGCCTGCTTAATGTCATCTTTTTAAGCTCTTTATTCCAAGATGATTGGGAGCAGTTTGCATTTGGATAATGTTTGTTGATCATTGAGTGAGTTCCAGAAGACCTGGACAGAATACAAATTCTCCATTTTTTTGGTTAATGATCTATATCCCCTGATGGTTATATATGGACATGTAACTCCTAGCCACTGCCAGCCATTTTCCTGTAGAGCTTCTGCTCGTGCATTGAATTACCGATGAAATTACTAATTAATTTTGTATTGCTTTTACAAGTTGAAATCATTTGTATGCTGGAGTCTACCACATTGGTTTGAGGGAATAGGTTATATATATGTGTGTGTGTCTGTGTGGTATGGGGTGCGGGGTATCCCACACATAAGCTAACTCTTTGAGATGGTGTTAGGCCCAAGGTCTGTTTTCTAGAATTTGACAAGTATGTTGCCACTTTTTGGTGGATGTGTATCTACCTTCATTATTTGATGTCTAGTTAAGTTTATTTTTGAGTTCCTAATATATTTGTTACGTTATCCAAGTAGTTTAACGGTCATATGCTTTCATTGATAAGCTTTCCAAGTTATTTACACTTTGTCCCTCACTCCCTCTTGTAGGCCATGGTTATTTCTTTGAGTAGTACCTCGTTTGACCTTCCTGGTGCATTTTAAGCAAACTATTCTTACGTGGACATCCTAAAGCTTTAAAATCAAATGCCCGTGTTGAAAACATGCTGTTGGGTGGGAATAGGAAAGCAAATATATTCTTACATTGCGTTACTTAAATGTGTTTTTAGAAGTAACTTCTCTTTTTAGTTGTGTTTATTTGTATTTCCTTTCTAAATATGCACTGTACTTATCAAATATTCATGCATATTAATGCATGAAGGAGTTCTGGTCCTCTTTTTTTGGTTGCTGTTAGCTGTGCTGATATTGGTTTCTCTTACCTTTTGACACAGCATAAGACAATTGACAGTGTCTTAGAACGTGGTGAGAAGCTAGACAGTTTGGTTGAGAAGAGTTCAGATCTCAGTGCTGCTTCACAGGTAATGCATCTGTTAAGAGGATTATAATCTTGAAAAGAAGATGAACGCTGTTTAACAATGAACAGTTCTTCATCTTTCCTCTTAGGTGGAATATTTTTCCTCTACTATTTTTATCAATTTATTTTGACAATTCAGATTATGTCTACTGTTGTGTGGATAATACTCGGATCTTTCAACAATGTTATTGCTATGGCTCACTAACTAAAAAGATCCAAGTGGTTTTTTTACGCTCAGTATCAAGTTGCACGGGGAGGTTATTTGCAATTTCTTTGTGGGAAGTATTTTACAAGTCACATTTTCTCTACAAGCATGGTGGACATGGCATGATAGGTGCAGGCGCATGCCATGGAACCATTAATTGAATAATATGGACATACAGAACTGAGCAACAAGTTTTGTAGTATTATCACACTAAATACACACATCTTCCTGCTAAGTGAACTCGTGTCAAAGAACACTGTCGAATATTGTTCTGCATTATATGTCCATTGGGTTTTGGGAGTTCTTTAGTTGAATTAAAAGACACTTCATGCTAAATTTTCTACTTGTGGAGGGAGAGGAACAAATGAAGCTTCTTGGTGGCTGGGAAAGTAAACATCTGATATAAGCTGTGTTCTATTATGCATGAACTGTATTTCGCTGGATCCCTTTGTGGTATAACCATGGATGTGATGATGTTAGTCTTTTATTACTATTTCTTCTGCTAATTTTAATATTGTAGAAGCTGCTGACTCTTAAACATTATCTGTGAGCCTCTACTAGTTTCGGCTTTTTTCCTGACATGACCTGTTTGATTTCTAAACAGATGTTCTACAAGCAGGCAAAGAAAACCAATTCATGCTGTACAATTTTATAGACTGTTTTCTGAAGATGGAAGGGGGCGATTCAACCACGGATAAACTTGTGTCTATGTTGCATATGAAGTATCGGAGAATTGTTTGTTTATATCATCCATGATATTCTATAAGCTTGAATTCTTTTTGTTCTCTATTGTAATATGATCTCAGATGAAGAGAAAGAGTCAGTCTCAGATTGATA-ATGTTGTTTGAAAGTTGTGATGTGATGATGTTCACCTACATGTAGTTACTATATAACATATTTCCTGTTTC</genome_strand>
        <mrna_strand>TCTCTCTCTCTCTTTTTTTTCCTTTTTCTTATTCTTATTCCTTCTCCATTAAATAATGAATAGCAATAAAATAAAATAAAATAAATAGTAATAAAATTCAACACATCGCGTAATCTGAAGAAGAATCAGTTCTATTCCTTCGAAGGCGGCCATAGAAGAGAGGAAAAAAAAAATTCTTTGAAATTTATTTTGGTGTTTTTGGATAATTTTTTGAAGAAGTTTGAGAGGTTTAGAGAGAAAAACAGAGATGAAGATCACAGCTTTGATGGTGTTGAAATGCAATCCAGAAGGTTCGGATCCTGTGATCTTAGCAAACGCTTCTGATGTTAACCATTTTGGGTATTTTCAGAGATCCAGCGTTAAGGAATTTATCGTTTTTGTGGGTCGAACTGTTGCTAAAAGGAACCCACCTGGACAACGACAATCTGTTCAGCATGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACAAGGTGCATTCATACAATCGAAATGGTTTATGTGCTTTGGGCTTCATGGATGATCACTATCCAGTTCGAAGTGCATTTTCACTGCTCAACCAG............................................................................................GTTTTGGATGAGTATCTGAAGAATTTTGGTGAGTCATGGAAGACGGCTCAATGCGACAATGCTCAACCATGGCCTTATCTGAATGAAGCTCTAGCCAAATTTCAG...................................................................................................................GATCCTGCTGAGGCCGATAAGCTGTTCAAAATTCAACGAGAGTTGGATGAAACAAAAATTATTCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATAAGACAATTGACAGTGTCTTAGAACGTGGTGAGAAGCTAGACAGTTTGGTTGAGAAGAGTTCAGATCTCAGTGCTGCTTCACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTCTACAAGCAGGCAAAGAAAACCAATTCATGCTGTACAATTTTATAGACTGTTTTCTGAAGATGGAAGGGGGCGATTCAACCACGGATAAACTTGTGTCTATGTTGCATATGAAGTATCGGAGAATTGTTTGTTTATATCATCCATGATATTCTATAAGCTTGAATTCTTTTTGTTCTCTATTGTAATATGATCTCAGATGAAGAGAAAAAGTCAGTCTCAGATTGATAGATCTTGTTTGAAAGTTGTGATGTGATGATGTTCACCTAAATGTAGTTACAATATAACATATTTCCTGTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U596129" ref_strand="+" ref_description="SGN-U596129 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|4097579|gb|AAD00116.1| (e_value=9e-77) NTGP1 [Nicotiana tabacum]; (*ATH) AT5G58060.1 (e_value=1e-68) | Symbol: None | SNARE protein-related, similar to SNARE protein Ykt6 (Homo sapiens) GI:2507637 | chr5:23515373-23517566 FORWARD | Aliases: K21L19.5, K21L19_5; (*SWP) sp|Q9ZRD6|YKT61_ARATH (e_value=1e-67) VAMP-like protein YKT61 OS=Arabidopsis thaliana GN=YKT61; ">
      <seq>ggggagttctattccttcgaaggcggccatagaagagaggaaaaaaaaaattctttgaaatttattttggtgtttttggataattttttgaagaagtttgagaggtttagagagaaaaacagagatgaagatcacagctttgatggtgttgaaatgcaatccagaaggttcggatcctgtgatcttagcaaacgcttctgatgttaaccattttgggtattttcagagatccagcgttaaggaatttatcgtttttgtgggtcgaactgttgctaaaaggaacccacctggacaacgacaatctgttcagcatgaagaatacaaggtgcattcatacaatcgaaatggtttatgtgctttgggcttcatggatgatcactatccagttcgaagtgcattttcnctgctcaaccaggttttggatgagtatctgaagaattttggtgagtcatggaagacggctcaatgcgacaatgctcaacnntggccnnatctgaatgaanctctagccnaanttcaggatcctgctgaggccgataagctgntcaaaattncnacgagagttggnatgaaacaaaaattattcnccatnannacaattgacagtgtcttanaacgtggtgagaancta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="+" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="18795" stop="22090"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19091" g_stop="19406" g_length="316"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="317" r_length="317" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19407" i_stop="20300" i_length="894">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.683" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20301" g_stop="20398" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="318" r_stop="415" r_length="98" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="20399" i_stop="20490" i_length="92">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="20491" g_stop="20595" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="416" r_stop="520" r_length="105" r_score="0.933"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="20596" i_stop="20710" i_length="115">
            <donor d_prob="0.982" d_score="0.86"/>
            <acceptor a_prob="0.998" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="20711" g_stop="20776" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="521" r_stop="588" r_length="68" r_score="0.894"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="20777" i_stop="21748" i_length="972">
            <donor d_prob="0.910" d_score="0.85"/>
            <acceptor a_prob="0.891" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="21749" g_stop="21790" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="589" r_stop="631" r_length="43" r_score="0.857"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="+" ref_id="SGN-U596129" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>627</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U596129" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19091" e_stop="19406"/>
          <exon e_start="20301" e_stop="20398"/>
          <exon e_start="20491" e_stop="20595"/>
          <exon e_start="20711" e_stop="20776"/>
          <exon e_start="21749" e_stop="21790"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCAGTTCTATTCCTTCGAAGGCGGCCATAGAAGAGAGG-AAAAAAAAATTCTTTGAAATTTATTTTGGTGTTTTTGGATAATTTTTTGAAGAAGTTTGAGAGGTTTAGAGAGAAAAACAGAGATGAAGATCACAGCTTTGATGGTGTTGAAATGCAATCCAGAAGGTTCGGATCCTGTGATCTTAGCAAACGCTTCTGATGTTAACCATTTTGGGTATTTTCAGAGATCCAGCGTTAAGGAATTTATCGTTTTTGTGGGTCGAACTGTTGCTAAAAGGAACCCACCTGGACAACGACAATCTGTTCAGCATGAAGGTTTGATTTTTCCAACACCCTTTTGGTTGATTTGGTTATGGGGTTGTCTTATCTTGGTTTTGGGGAATCAAATATGTTGTTTGGTTTTGGTGGAATTGTAGATGTCTTGTGGATTGATGATTTTTTTGTTTTTTATTGGATGTTTGGATTTGTGATATTAGGTAGGTTGCAGCTCAATTTGCTGTTTCTATTGGTAAAGTGTATAGATGGATGAGTAATGTTGCAAAGTTAGACAAAAAAAGTAGGATTTCTTCCCATCTGTTTTAGCTTTGTAGATAATTGAATATAGTTAGCTGGTACCTATGGCTGGAGGGAGGTGGCAGGTACCTGTATTCAAGGTGCGTGCAAGTGAGCATAGACACCGATCGTTATGAAAAAAGATGCAAGCTTGTGGTCCTATAGGTGCTCCTGATGCTTTGAGTCTTGCATTTTGTGATTTTCTGTTTTCATTTCTCTTTTTCTTTTTTTTGTGTTTTGGGGATGGTTTTGCACAAAAGTTTATCAATAACCTCAAGGTACATGTTACCCTACCCAGAAGCCACTTTTTTGAACTACACGGGGTATGTTGTCCTTGTACAAAAGTAGAAGGATGAATGAAGTGTTGACTAGCTTGGTTGGGAAAATTGTTATGTTTAACGAATTGATCTTTTTCAGTTATATTTCTTGAAGTCTTCACATGCTTACACAAGTAATGTTAATCGGTGTTCTTGATATATATCAACTAGTGTAGGATATAAAAATTTGGTGGATTGGTTCTCAATCACAGCCTCTAGCACAAAGTAGTGATTTTTAAGTCGTATTTGATCTATATACCGACCCAATGGTATACTCCTCGATTGTGTTTTGGTCACACATACACCAGTTTTGACTTTTTTTTTTTTTTTTTTACCTTAGAATACAAGGTGCATTCATACAATCGAAATGGTTTATGTGCTTTGGGCTTCATGGATGATCACTATCCAGTTCGAAGTGCATTTTCACTGCTCAACCAGGTATAGGCTCTTTATTATAGATATTCATCTTTGAGAGGAGAAACTCTATATATGGAGAAATCAAATTATGGATCTGCATCTCATTTTTCCAGGTTTTGGATGAGTATCTGAAGAATTTTGGTGAGTCATGGAAGACGGCTCAATGCGACAATGCTCAACCATGGCCTTATCTGAATGAAGCTCTAGCCAAATTTCAGGTTCCCCTTCTGTTTTTGTTTTCTGGGTGATGATGGAATTTCATTTTCAATCAAATTCTTCCCACTTTCATCTTAAAACAATTGACGTTTGAGCTGATCATGTTGACCCCTACAGGATCCTGCTGAGGCCGATAAGCTGTTCAAAATT-CAACGAGAGTTGG-ATGAAACAAAAATTATTCTCGTAAGTATTGTGTTATTCTCATGATTGCCTGCTTAATGTCATCTTTTTAAGCTCTTTATTCCAAGATGATTGGGAGCAGTTTGCATTTGGATAATGTTTGTTGATCATTGAGTGAGTTCCAGAAGACCTGGACAGAATACAAATTCTCCATTTTTTTGGTTAATGATCTATATCCCCTGATGGTTATATATGGACATGTAACTCCTAGCCACTGCCAGCCATTTTCCTGTAGAGCTTCTGCTCGTGCATTGAATTACCGATGAAATTACTAATTAATTTTGTATTGCTTTTACAAGTTGAAATCATTTGTATGCTGGAGTCTACCACATTGGTTTGAGGGAATAGGTTATATATATGTGTGTGTGTCTGTGTGGTATGGGGTGCGGGGTATCCCACACATAAGCTAACTCTTTGAGATGGTGTTAGGCCCAAGGTCTGTTTTCTAGAATTTGACAAGTATGTTGCCACTTTTTGGTGGATGTGTATCTACCTTCATTATTTGATGTCTAGTTAAGTTTATTTTTGAGTTCCTAATATATTTGTTACGTTATCCAAGTAGTTTAACGGTCATATGCTTTCATTGATAAGCTTTCCAAGTTATTTACACTTTGTCCCTCACTCCCTCTTGTAGGCCATGGTTATTTCTTTGAGTAGTACCTCGTTTGACCTTCCTGGTGCATTTTAAGCAAACTATTCTTACGTGGACATCCTAAAGCTTTAAAATCAAATGCCCGTGTTGAAAACATGCTGTTGGGTGGGAATAGGAAAGCAAATATATTCTTACATTGCGTTACTTAAATGTGTTTTTAGAAGTAACTTCTCTTTTTAGTTGTGTTTATTTGTATTTCCTTTCTAAATATGCACTGTACTTATCAAATATTCATGCATATTAATGCATGAAGGAGTTCTGGTCCTCTTTTTTTGGTTGCTGTTAGCTGTGCTGATATTGGTTTCTCTTACCTTTTGACACAGCAT-AAGACAATTGACAGTGTCTTAGAACGTGGTGAGAAGCTA</genome_strand>
        <mrna_strand>GGGGAGTTCTATTCCTTCGAAGGCGGCCATAGAAGAGAGGAAAAAAAAAATTCTTTGAAATTTATTTTGGTGTTTTTGGATAATTTTTTGAAGAAGTTTGAGAGGTTTAGAGAGAAAAACAGAGATGAAGATCACAGCTTTGATGGTGTTGAAATGCAATCCAGAAGGTTCGGATCCTGTGATCTTAGCAAACGCTTCTGATGTTAACCATTTTGGGTATTTTCAGAGATCCAGCGTTAAGGAATTTATCGTTTTTGTGGGTCGAACTGTTGCTAAAAGGAACCCACCTGGACAACGACAATCTGTTCAGCATGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACAAGGTGCATTCATACAATCGAAATGGTTTATGTGCTTTGGGCTTCATGGATGATCACTATCCAGTTCGAAGTGCATTTTCNCTGCTCAACCAG............................................................................................GTTTTGGATGAGTATCTGAAGAATTTTGGTGAGTCATGGAAGACGGCTCAATGCGACAATGCTCAACNNTGGCCNNATCTGAATGAANCTCTAGCCNAANTTCAG...................................................................................................................GATCCTGCTGAGGCCGATAAGCTGNTCAAAATTNCNACGAGAGTTGGNATGAAACAAAAATTATTCNC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATNANNACAATTGACAGTGTCTTANAACGTGGTGAGAANCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U596130" ref_strand="+" ref_description="SGN-U596130 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|4097579|gb|AAD00116.1| (e_value=5e-76) NTGP1 [Nicotiana tabacum]; (*ATH) AT5G58060.1 (e_value=5e-67) | Symbol: None | SNARE protein-related, similar to SNARE protein Ykt6 (Homo sapiens) GI:2507637 | chr5:23515373-23517566 FORWARD | Aliases: K21L19.5, K21L19_5; (*SWP) sp|Q9ZRD6|YKT61_ARATH (e_value=5e-66) VAMP-like protein YKT61 OS=Arabidopsis thaliana GN=YKT61; ">
      <seq>ccttggaaggcggccatagaagagaggaaaaaaaaattctttgaaatttattttggtgtttttggataattttttgaagaagtttgagaggtttagagagaaaaacagagatgaagatcacagctttgatggtgttgaaatgcaatccagaaggttcggatcctgtgatcttagcaaacgcttctgatgttaaccattttgggtattttcagagatccagcgttaaggaatttatcgtttttgtgggtcgaactgttgctaaaaggaacccacctggacaacgacaatctgttcagcatgaagaatacaaggtgcattcatacaatcgaaatggtttatgtgctttgggcttcatggatgatcactatccagttcgaagtgcattttcactgctcaaccaggtataggctctttattttagatattcatctttgagaggagaaactctatatatggagaaatcaaactatggatctgcatctgattttccaggttttggatgagtatctgaagaattttggtgagtcatggaaagcggttcaaagcgacaatgctcaaccatggccttatctgaatgaagctctagccaaatttcaggatcctgctgaggccgataagctgttcaaaattcaacgagagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="+" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="18804" stop="21053"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19104" g_stop="19406" g_length="303"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="303" r_length="303" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19407" i_stop="20300" i_length="894">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.683" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20301" g_stop="20595" g_length="295"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="597" r_length="294" r_score="0.973"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="20596" i_stop="20710" i_length="115">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="20711" g_stop="20753" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="598" r_stop="640" r_length="43" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="+" ref_id="SGN-U596130" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>641</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U596130" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19104" e_stop="19406"/>
          <exon e_start="20301" e_stop="20595"/>
          <exon e_start="20711" e_stop="20753"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTTCGAAGGCGGCCATAGAAGAGAGGAAAAAAAAATTCTTTGAAATTTATTTTGGTGTTTTTGGATAATTTTTTGAAGAAGTTTGAGAGGTTTAGAGAGAAAAACAGAGATGAAGATCACAGCTTTGATGGTGTTGAAATGCAATCCAGAAGGTTCGGATCCTGTGATCTTAGCAAACGCTTCTGATGTTAACCATTTTGGGTATTTTCAGAGATCCAGCGTTAAGGAATTTATCGTTTTTGTGGGTCGAACTGTTGCTAAAAGGAACCCACCTGGACAACGACAATCTGTTCAGCATGAAGGTTTGATTTTTCCAACACCCTTTTGGTTGATTTGGTTATGGGGTTGTCTTATCTTGGTTTTGGGGAATCAAATATGTTGTTTGGTTTTGGTGGAATTGTAGATGTCTTGTGGATTGATGATTTTTTTGTTTTTTATTGGATGTTTGGATTTGTGATATTAGGTAGGTTGCAGCTCAATTTGCTGTTTCTATTGGTAAAGTGTATAGATGGATGAGTAATGTTGCAAAGTTAGACAAAAAAAGTAGGATTTCTTCCCATCTGTTTTAGCTTTGTAGATAATTGAATATAGTTAGCTGGTACCTATGGCTGGAGGGAGGTGGCAGGTACCTGTATTCAAGGTGCGTGCAAGTGAGCATAGACACCGATCGTTATGAAAAAAGATGCAAGCTTGTGGTCCTATAGGTGCTCCTGATGCTTTGAGTCTTGCATTTTGTGATTTTCTGTTTTCATTTCTCTTTTTCTTTTTTTTGTGTTTTGGGGATGGTTTTGCACAAAAGTTTATCAATAACCTCAAGGTACATGTTACCCTACCCAGAAGCCACTTTTTTGAACTACACGGGGTATGTTGTCCTTGTACAAAAGTAGAAGGATGAATGAAGTGTTGACTAGCTTGGTTGGGAAAATTGTTATGTTTAACGAATTGATCTTTTTCAGTTATATTTCTTGAAGTCTTCACATGCTTACACAAGTAATGTTAATCGGTGTTCTTGATATATATCAACTAGTGTAGGATATAAAAATTTGGTGGATTGGTTCTCAATCACAGCCTCTAGCACAAAGTAGTGATTTTTAAGTCGTATTTGATCTATATACCGACCCAATGGTATACTCCTCGATTGTGTTTTGGTCACACATACACCAGTTTTGACTTTTTTTTTTTTTTTTTTACCTTAGAATACAAGGTGCATTCATACAATCGAAATGGTTTATGTGCTTTGGGCTTCATGGATGATCACTATCCAGTTCGAAGTGCATTTTCACTGCTCAACCAGGTATAGGCTCTTTATTATAGATATTCATCTTTGAGAGGAGAAACTCTATATATGGAGAAATCAAATTATGGATCTGCATCTCATTTTTCCAGGTTTTGGATGAGTATCTGAAGAATTTTGGTGAGTCATGGAAGACGGCTCAATGCGACAATGCTCAACCATGGCCTTATCTGAATGAAGCTCTAGCCAAATTTCAGGTTCCCCTTCTGTTTTTGTTTTCTGGGTGATGATGGAATTTCATTTTCAATCAAATTCTTCCCACTTTCATCTTAAAACAATTGACGTTTGAGCTGATCATGTTGACCCCTACAGGATCCTGCTGAGGCCGATAAGCTGTTCAAAATTCAACGAGAGT</genome_strand>
        <mrna_strand>CCTTGGAAGGCGGCCATAGAAGAGAGGAAAAAAAAATTCTTTGAAATTTATTTTGGTGTTTTTGGATAATTTTTTGAAGAAGTTTGAGAGGTTTAGAGAGAAAAACAGAGATGAAGATCACAGCTTTGATGGTGTTGAAATGCAATCCAGAAGGTTCGGATCCTGTGATCTTAGCAAACGCTTCTGATGTTAACCATTTTGGGTATTTTCAGAGATCCAGCGTTAAGGAATTTATCGTTTTTGTGGGTCGAACTGTTGCTAAAAGGAACCCACCTGGACAACGACAATCTGTTCAGCATGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACAAGGTGCATTCATACAATCGAAATGGTTTATGTGCTTTGGGCTTCATGGATGATCACTATCCAGTTCGAAGTGCATTTTCACTGCTCAACCAGGTATAGGCTCTTTATTTTAGATATTCATCTTTGAGAGGAGAAACTCTATATATGGAGAAATCAAACTATGGATCTGCATCTGA-TTTTCCAGGTTTTGGATGAGTATCTGAAGAATTTTGGTGAGTCATGGAAAGCGGTTCAAAGCGACAATGCTCAACCATGGCCTTATCTGAATGAAGCTCTAGCCAAATTTCAG...................................................................................................................GATCCTGCTGAGGCCGATAAGCTGTTCAAAATTCAACGAGAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U599052" ref_strand="+" ref_description="SGN-U599052 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ttttgaattcagcacgaggggcaggtacctgtattcaaggtgcgtgcaagtgagcatagacaccgatcgttatgaaaaaagatgcaagcttgtggtcctataggtgctcctgatgctttgagtcttgcattttgtgattttctgttttcatttctctttttcttttttttgtgttttggggatggttttgcacaaaagtttatcaataacctcaaggtacatgttaccctacccagaagccacttttttgaactacacggggtatgttgtccttgtacaaaagtagaaggatgaatgaagtgttgactagcttggttgggaaaattgttatgtttaacgaattgatctttttcagttatatttcttgaagtcttcacatgcttacacaagtaatgttaatcggtgttcttgatatatatcaactagtgtaggatataaaaatttggtggattggttctcaatcacagcctctagcacaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="+" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="19420" stop="20486"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19723" g_stop="20186" g_length="464"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="481" r_length="464" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="+" ref_id="SGN-U599052" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>464</cumulative_length_of_scored_exons>
        <coverage percentage="0.965" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U599052" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19723" e_stop="20186"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGGCAGGTACCTGTATTCAAGGTGCGTGCAAGTGAGCATAGACACCGATCGTTATGAAAAAAGATGCAAGCTTGTGGTCCTATAGGTGCTCCTGATGCTTTGAGTCTTGCATTTTGTGATTTTCTGTTTTCATTTCTCTTTTTCTTTTTTTTGTGTTTTGGGGATGGTTTTGCACAAAAGTTTATCAATAACCTCAAGGTACATGTTACCCTACCCAGAAGCCACTTTTTTGAACTACACGGGGTATGTTGTCCTTGTACAAAAGTAGAAGGATGAATGAAGTGTTGACTAGCTTGGTTGGGAAAATTGTTATGTTTAACGAATTGATCTTTTTCAGTTATATTTCTTGAAGTCTTCACATGCTTACACAAGTAATGTTAATCGGTGTTCTTGATATATATCAACTAGTGTAGGATATAAAAATTTGGTGGATTGGTTCTCAATCACAGCCTCTAGCACAAAG</genome_strand>
        <mrna_strand>GGGGCAGGTACCTGTATTCAAGGTGCGTGCAAGTGAGCATAGACACCGATCGTTATGAAAAAAGATGCAAGCTTGTGGTCCTATAGGTGCTCCTGATGCTTTGAGTCTTGCATTTTGTGATTTTCTGTTTTCATTTCTCTTTTTCTTTTTTTTGTGTTTTGGGGATGGTTTTGCACAAAAGTTTATCAATAACCTCAAGGTACATGTTACCCTACCCAGAAGCCACTTTTTTGAACTACACGGGGTATGTTGTCCTTGTACAAAAGTAGAAGGATGAATGAAGTGTTGACTAGCTTGGTTGGGAAAATTGTTATGTTTAACGAATTGATCTTTTTCAGTTATATTTCTTGAAGTCTTCACATGCTTACACAAGTAATGTTAATCGGTGTTCTTGATATATATCAACTAGTGTAGGATATAAAAATTTGGTGGATTGGTTCTCAATCACAGCCTCTAGCACAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U578306" ref_strand="+" ref_description="SGN-U578306 Tomato 200607#2 [35 ESTs aligned] (*GB) gi|77744859|gb|ABB02383.1| (e_value=2e-100) temperature-induced; (*ATH) AT5G58070.1 (e_value=2e-77) | Symbol: None | lipocalin, putative, similar to temperature stress-induced lipocalin (Triticum aestivum) GI:18650668 | chr5:23517287-23518435 REVERSE | Aliases: K21L19.9, K21L19_9; (*SWP) sp|Q46036|BLC_CITFR (e_value=1e-17) Outer membrane lipoprotein blc OS=Citrobacter freundii; ">
      <seq>gaattgatcaagaaaccaattccaaagagaccaaaacccttatactacactttgaaattttgcaaaaaaatatgaccacaaaagagatggaagtagtgaagaatttggatgttgaaaaatacatgggaagatggtatgaaattgcctcatttccatcaagaaatcaaccaaaagatggtgtaaacacaagagccacttacactttaaaccaagatggaacagtacatgtgttaaatgaaacatggagtggtggtaaaagaggttcaattgaagggactgcctataaagctgatccaaaaagtgatgaagcaaaacttaaagtgaaattttatatcccacctttcttgccaattattcctattgttggtgattattgggttttatatattgatgatgattatcaatatgctttgattggtcagcctagtaagaaatatctttggatattatgtaggcaaccacatcttgatgaagaaatatacaaccaacttgttgagaaggcaaaagaagtaggatatgatgtgagcaaacttcacaagacacctcaagctgatcctccaccagatggtgaagatgccccaaaggacactaaaggattttggtggatcaaatcaatattgggaaaatagtcaatcttgaatatggtttttttaaaccaatagctaaataaattttacaatataaattatgaaaagttgtcttgtaaagaagagtttattattgtttatatttcaaatgttgtaattttctaaggtgtgtccttcttgtgttggtagcaagtatagcatgtgtaatattgtgttgttgcaacttgtaagagagtttgttgttaattttacaatataaattatgaaatgttgaatatatatagttcgtttcgttcaaatgaagtttcttgaatttttatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="-" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="32604" stop="30841"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32308" g_stop="31866" g_length="443"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="443" r_length="443" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31865" i_stop="31607" i_length="259">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31606" g_stop="31141" g_length="466"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="909" r_length="466" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="-" ref_id="SGN-U578306" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>909</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U578306" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32308" e_stop="31866"/>
          <exon e_start="31606" e_stop="31141"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACCTTATCAAGAAACCAATTCAAAAGAGACCAAAACCCTTATACTACACTTTGAAATTTTGCAAAAAAATATGACCACAAAAGAGATGGAAGTAGTGAAGAATTTGGATGTTGAAAAATACATGGGAAGATGGTATGAAATTGCCTCATTTCCATCAAGAAATCAACCAAAAGATGGTGTAAACACAAGAGCCACTTACACTTTAAACCAAGATGGAACAGTACATGTGTTAAATGAAACATGGAGTGGTGGTAAAAGAGGTTCAATTGAAGGGACTGCCTATAAAGCTGATCCAAAAAGTGATGAAGCAAAACTTAAAGTGAAATTTTATATCCCACCTTTCTTGCCAATTATTCCTATTGTTGGTGATTATTGGGTTTTATATATTGATGATGATTATCAATATGCTTTGATTGGTCAGCCTAGTAAGAAATATCTTTGGGTAAGTTCACTAAACCTTAGTTGTTGATATTTTGAAAAACAACATATGGTTGGATATGAATATTTGGGAGGAAGCTAGTTACATAATGCTTATCATAAACTTAAGTGGAGTTAAGATACAATAACAACTTATTCAATAGTCTTATAAGTAAGTTATTCAGTATAGTTTTATAACATGTTTTCCGAGGAGATTTATCTATAGATATCTTCTGCTTGATCATATTATATGTTTTTAACAAAATGTTTATTCTGGTTTATAGATATTATGTAGGCAACCACATCTTGATGAAGAAATATACAACCAACTTGTTGAGAAGGCAAAAGAAGTAGGATATGATGTGAGCAAACTTCACAAGACACCTCAAGCTGATCCTCCACCAGATGGTGAAGATGCCCCAAAGGACACTAAAGGATTTTGGTGGATCAAATCAATATTGGGAAAATAGTCAATCTTGAATATGGTTTTTTTAAACCAATAGCTAAATAAATTTTACAATATAAATTATGAAAAGTTGTCTTGTAAAGAAGAGTTTATTATTGTTTATATTTCAAATGTTGTAATTTTCTAAGGTGTGTCCTTCTTGTGTTGGTAGCAAGTATAGCATGTGTAATATTGTGTTGTTGCAACTTGTAAGAGAGTTTGTTGTTAATTTTACAATATAAATTATGAAATGTTGAATATATATAGTTCGTTTCGTTCAAATGAAGTTTCTTGAATTTTTATAC</genome_strand>
        <mrna_strand>GAATTGATCAAGAAACCAATTCCAAAGAGACCAAAACCCTTATACTACACTTTGAAATTTTGCAAAAAAATATGACCACAAAAGAGATGGAAGTAGTGAAGAATTTGGATGTTGAAAAATACATGGGAAGATGGTATGAAATTGCCTCATTTCCATCAAGAAATCAACCAAAAGATGGTGTAAACACAAGAGCCACTTACACTTTAAACCAAGATGGAACAGTACATGTGTTAAATGAAACATGGAGTGGTGGTAAAAGAGGTTCAATTGAAGGGACTGCCTATAAAGCTGATCCAAAAAGTGATGAAGCAAAACTTAAAGTGAAATTTTATATCCCACCTTTCTTGCCAATTATTCCTATTGTTGGTGATTATTGGGTTTTATATATTGATGATGATTATCAATATGCTTTGATTGGTCAGCCTAGTAAGAAATATCTTTGG...................................................................................................................................................................................................................................................................ATATTATGTAGGCAACCACATCTTGATGAAGAAATATACAACCAACTTGTTGAGAAGGCAAAAGAAGTAGGATATGATGTGAGCAAACTTCACAAGACACCTCAAGCTGATCCTCCACCAGATGGTGAAGATGCCCCAAAGGACACTAAAGGATTTTGGTGGATCAAATCAATATTGGGAAAATAGTCAATCTTGAATATGGTTTTTTTAAACCAATAGCTAAATAAATTTTACAATATAAATTATGAAAAGTTGTCTTGTAAAGAAGAGTTTATTATTGTTTATATTTCAAATGTTGTAATTTTCTAAGGTGTGTCCTTCTTGTGTTGGTAGCAAGTATAGCATGTGTAATATTGTGTTGTTGCAACTTGTAAGAGAGTTTGTTGTTAATTTTACAATATAAATTATGAAATGTTGAATATATATAGTTCGTTTCGTTCAAATGAAGTTTCTTGAATTTTTATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U573488" ref_strand="+" ref_description="SGN-U573488 Tomato 200607#2 [6 ESTs aligned] ">
      <seq>ggatcccccggggtgcattaatacggaaccaggttgggacttgagatcagctatatttcaatattctatattttgagttctctaatgctaggtgaaatgcgtgtagttccagtttaataaagaaagagctgtattctaaaaatgaaatatatcaagtgtaccatttaagttgatttaccagtatttactaaaaataataatctcagaatgtcttaagttaacaatcaccttctagaataattttgtattctaggatgtgtattattaaaagaaagaaattaccattaaaatgaaaaaataatttaaacagcccactgtattatattgaacagaattctagaacctgccattgaacaatctgccaaaaaaggtcaatcattacacttgtaaggtgcttgaatgtccacgtctatatccacaaatatttcacagcacacaatatctcctcatcccaataaaccttatcaagaattcaatctctgaaagaacaaaaaaacttaaaatcctgtattgtttgtttgtttgattttagtttgaaataaaatctaaaaaagcaaaaaaagttgtcaattttgtgaatttaaaatatgtaaaatattattatctactctcataattttaaaaatattacatggaaagtattatcttttaagtaaattatttttgttaggagtaagataaggaaaaaatggggaattaaattttaacgaataagataaaagctcaaataatcaatcaactgacaccaaaaaaaggatacttctattttaaaacanattaaaaagaaaaatattacaaataaattttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="-" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="33511" stop="32126"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33200" g_stop="32426" g_length="775"/>
          <reference_exon_boundary r_type="cDNA" r_start="34" r_stop="808" r_length="775" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="-" ref_id="SGN-U573488" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>775</cumulative_length_of_scored_exons>
        <coverage percentage="0.959" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U573488" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33200" e_stop="32426"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGGACTTGAGATCAGCTATATTTCAATATTCTATATTTTGAGTTCTCTAATGCTAGGTGAAATGCGTGTAGTTCCAGTTTAATAAAGAAAGAGCTGTATTCTAAAAATGAAATATATCAAGTGTACCATTTAAGTTGATTTACCAGTATTTACTAAAAATAATAATCTCAGAATGTCTTAAGTTAACAATCACCTTCTAGAATAATTTTGTATTCTAGGATGTGTATTATTAAAAGAAAGAAATTACCATTAAAATGAAAAAATAATTTAAACAGCCCACTGTATTATATTGAACAGAATTCTAGAACCTGCCATTGAACAATCTGCCAAAAAAGGTCAATCATTACACTTGTAAGGTGCTTGAATGTCCACGTCTATATCCACAAATATTTCACAGCACACAATATCTCCTCATCCCAATAAACCTTATCAAGAATTCAATCTCTGAAAGAACAAAAAAACTTAAAATCCTGTATTGTTTGTTTGTTTGATTTTAGTTTGAAATAAAATCTAAAAAAGCAAAAAAAGTTGTCAATTTTGTGAATTTAAAATATGTAAAATATTATTATCTACTCTCATAATTTTAAAAATATTACATGGAAAGTATTATCTTTTAAGTAAATTATTTTTGTTAGGAGTAAGATAAGGAAAAAATGGGGAATTAAATTTTAACGAATAAGATAAAAGCTCAAATAATCAATCAACTGACACCAAAAAAAGGATACTTCTATTTTAAAACAAATTAAAAAGAAAAATATTACAAATAAATTTTG</genome_strand>
        <mrna_strand>TTGGGACTTGAGATCAGCTATATTTCAATATTCTATATTTTGAGTTCTCTAATGCTAGGTGAAATGCGTGTAGTTCCAGTTTAATAAAGAAAGAGCTGTATTCTAAAAATGAAATATATCAAGTGTACCATTTAAGTTGATTTACCAGTATTTACTAAAAATAATAATCTCAGAATGTCTTAAGTTAACAATCACCTTCTAGAATAATTTTGTATTCTAGGATGTGTATTATTAAAAGAAAGAAATTACCATTAAAATGAAAAAATAATTTAAACAGCCCACTGTATTATATTGAACAGAATTCTAGAACCTGCCATTGAACAATCTGCCAAAAAAGGTCAATCATTACACTTGTAAGGTGCTTGAATGTCCACGTCTATATCCACAAATATTTCACAGCACACAATATCTCCTCATCCCAATAAACCTTATCAAGAATTCAATCTCTGAAAGAACAAAAAAACTTAAAATCCTGTATTGTTTGTTTGTTTGATTTTAGTTTGAAATAAAATCTAAAAAAGCAAAAAAAGTTGTCAATTTTGTGAATTTAAAATATGTAAAATATTATTATCTACTCTCATAATTTTAAAAATATTACATGGAAAGTATTATCTTTTAAGTAAATTATTTTTGTTAGGAGTAAGATAAGGAAAAAATGGGGAATTAAATTTTAACGAATAAGATAAAAGCTCAAATAATCAATCAACTGACACCAAAAAAAGGATACTTCTATTTTAAAACANATTAAAAAGAAAAATATTACAAATAAATTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U594425" ref_strand="+" ref_description="SGN-U594425 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>taggcgatgatgatttttgccaatttttattaccttctgtgctgattaattgggcatttgaggttatctgacccgtatcttggcggggcatgctcccagattttctggtggtttttgcagccatggcgtggttggactctcttgttgcccaagcttaacacagatctgagtctcaatttttctctaatctgcttgggctctttttttcgccgcctaacgttaagggtttgtttggtatgaaggaagttttcgtgagttgagaaacaaaaagcaaaaagctcagaagggaaagtgaggctacagagagttgaagatttttcattgaaagggtggttgcctctctaaacattcagccaatgatttctctattactgtcaggatcccaactctgagctgattattcgggcatttgaggttatccaacccgtatcttggcagggtgtgccaccagattttctggtggtttttgcagccatggcgttattggactttctttttgcctgagctcaacacagatctgagcctcactttctctgtcagtttagggaaacaaaaggttaggaaaatgaacacagcaaaagctttaaagggatagattgaggctatagagagttgaggacttctcattgaatgggtgantgcctcgctctatattcagccaatganttctccattanngnaaataacccaattatccttctatcnattttaatgna</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="-" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="38311" stop="37002"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38012" g_stop="37300" g_length="713"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="716" r_length="716" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="-" ref_id="SGN-U594425" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U594425" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38012" e_stop="37300"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGCGATGATGATTTTTGCCAATTTTTATTCCCTTCTGTGCTGATTAATTGGGCATTTGAGGTTATCTGACCCGTATCTTGGCGGGGCATGCTCCCAGATTTTCTGGTGGTTTTTGCAGCCATGGCGTGGTTGGACTCTCTTGTTGCCCAAGCTT-A-ACAGATCTGAGTCTCAATTTTTCTCTAATCTGCTTGGGCTC-TTTTTTCGCCGCCTAACGTTAAGGGTTTGTTTGGTATGAAGGAAGTTTTCGTGAGTTGAGAAACAAAAAGCAAAAAGCTCAGAAGGGAAAGTGAGGCTACAGAGAGTTGAAGATTTTTCATTGAAAGGGTGGTTGCCTCTCTAAACATTCAGCCAATGATTTCTCCATTACTGTCAGGATCCCAACTCTGAGCTGATTATTCGGGCATTTGAGGTTATCCAACCCGTATCTTGGCAGGGCGTGCCACCAGATTTTCTGGTGGTTTTTGCAGCCATGGCGTTATTGGACTTTCTTTTTGCCTGAGCTCAATACAGATCTGAGCCTCACTTTCTCTGTCAGTTTAGGGAAACAAAAGGTTAGGAAAATGAACACAGGAAAAGCTTTAAAGGGATAGATTGAGGCTATAGAGAGTTGAGGACTTCTCATTGAATGGGTGATTGCCTCGCTCTATATTCAGCCAATGATTTCTCCATTAAGGTAAATAGCCCAATTATCCTTCTATCAATTTTAATGAA</genome_strand>
        <mrna_strand>TAGGCGATGATGATTTTTGCCAATTTTTATTACCTTCTGTGCTGATTAATTGGGCATTTGAGGTTATCTGACCCGTATCTTGGCGGGGCATGCTCCCAGATTTTCTGGTGGTTTTTGCAGCCATGGCGTGGTTGGACTCTCTTGTTGCCCAAGCTTAACACAGATCTGAGTCTCAATTTTTCTCTAATCTGCTTGGGCTCTTTTTTTCGCCGCCTAACGTTAAGGGTTTGTTTGGTATGAAGGAAGTTTTCGTGAGTTGAGAAACAAAAAGCAAAAAGCTCAGAAGGGAAAGTGAGGCTACAGAGAGTTGAAGATTTTTCATTGAAAGGGTGGTTGCCTCTCTAAACATTCAGCCAATGATTTCTCTATTACTGTCAGGATCCCAACTCTGAGCTGATTATTCGGGCATTTGAGGTTATCCAACCCGTATCTTGGCAGGGTGTGCCACCAGATTTTCTGGTGGTTTTTGCAGCCATGGCGTTATTGGACTTTCTTTTTGCCTGAGCTCAACACAGATCTGAGCCTCACTTTCTCTGTCAGTTTAGGGAAACAAAAGGTTAGGAAAATGAACACAGCAAAAGCTTTAAAGGGATAGATTGAGGCTATAGAGAGTTGAGGACTTCTCATTGAATGGGTGANTGCCTCGCTCTATATTCAGCCAATGANTTCTCCATTANNGNAAATAACCCAATTATCCTTCTATCNATTTTAATGNA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U566024" ref_strand="+" ref_description="SGN-U566024 Tomato 200607#2 [7 ESTs aligned] ">
      <seq>ttttatgaatacatcccacccatggcttagaggctttggtccagcagcattagtacaacaattgttgtgtaataggggtgcatgttgccagtttgaaatatcccttttgtttagggataagagtgcaacagttggtgagtacgatgcatgccacagatttgaattatgaagcttggtatctaagcagagaaagacagatggccggtgcaacatagagattcaaacaaaagtgaaatctctctactgttttttgctgataatgttcacaacttctatagccaagtgagaccatatgtaaagttggaaaaattggtataaaagtaacctatttggagttagagaaaagttgtttttgatataatttgcaaaaagagaacaatgaaagtgaaggtaaaatgttgaagataatatgacaaactaaaaaaggaacaatcagtatcaaaattatacaatgaagtgcaagaaatattaaaagggatggaacaacaagaaacttcatggaaatttgattatccatcatcataccttcgcatcggaacacctgtacatctcattttcacatattcgaactatattcgaactatcttgactgagaaaattatattaaaaagaatctaaaaattgtaaatgcaaatctttgtgtcctaaagaaattgttattttatactttcaacaagattaaagttgatttttttaatgaagatactgttcctctggtaaagatgggagtattttagttcaagtgttgggtactatataagcaaaaccttagggcaatggacaaagcaaaaagctcaaaagggaaagaatgaggcttaaagagagtttaaggatttctcattgaaagggtggttgccactctctacatcagccgatgatttctccatttatctaagaattccaacaacctttttcttatcaattttgaacagaggaaatatacaattatcagctttgtttgaaatgggtttctatggcctttcaactctttttccctttttatttctttatacttatgcttatgcctgagcattcagtgttgccggtgggggtgattataattggtgtctttatagaggcgatgatgatttttgtccctttttattcccttttgagctgattaattgagcatttgaggttatctgatccgtaacttggcggggcatacttttttttgcagccatggcgtggttggactctctttttgctcgagcttaacacagatctgagcctcaatttgctggtctcttcatcaatttcaattgagggagtattattaacagcttcagggtactataagctattactcataaattaaaaatgaggctaacatggattttgaggatttttatgttgaaagggtggttgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="-" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="42323" stop="40354"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42023" g_stop="40654" g_length="1370"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1370" r_length="1370" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="-" ref_id="SGN-U566024" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1370</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U566024" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42023" e_stop="40654"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTATGAATACATCCCACCCATGGCTTAGAGGCTTTGGTCCAGCAGCATTAGTACAACAATTGTTGTGTAATAGGGGTGCATGTTGCCAGTTTGAAATATCCCTTTTGTTTAGGGATAAGAGTGCAACAGTTGGTGAGTACGATGCATGCCACAGATTTGAATTATGAAGCTTGGTATCTAAGCAGAGAAAGACAGATGGCCGGTGCAACATAGAGATTCAAACAAAAGTGAAATCTCTCTACTGTTTTTTGCTGATAATGTTCACAACTTCTATAGCCAAGTGAGACCATATGTAAAGTTGGAAAAATTGGTATAAAAGTAACCTATTTGGAGTTAGAGAAAAGTTGTTTTTGATATAATTTGCAAAAAGAGAACAATGAAAGTGAAGGTAAAATGTTGAAGATAATATGACAAACTAAAAAAGGAACAATCAGTATCAAAATTATACAATGAAGTGCAAGAAATATTAAAAGGGATGGAACAAACAGAAACTTCATGGAAATTTGATTATCCATCATCATACCTTCGCATCGGAACACCTGTACATCTCATTTTCACATATTCGAACTATATTCGAACTATCTTGACTGAGAAAATTATATTAAAAAGAATCTAAAAATTGTAAATGCAAATCTCTGTGTCCTAAAGAAATTGTTATTTTATACTTTCAACAAGATTAAAGTTGATTTTTTTAATGAAGATACTGTTCCTCTGGTAAAGATGGGAGTATTTTAGTTCAAGTGTTGGGTACTATATAAGCAAAACCTTAGGGCAATGGACAAAGCAAAAAGCTCAAAAGGGAAAGAATGAGGCTTAAAGAGAGTTTAAGGATTTCTCATTGAAAGGGTGGTTGCCACTCTCTACATCAGCCGATGATTTCTCCATTTATCTAAGAATTCCAACAACCTTTTTCTTATCAATTTTGAACAGAGGAAATATACAATTATCAGCTTTGTTTGAAATGGGTTTCTATGGCCTTTCAACTCTTTTTCCCTTTTTATTTCTTTATACTTATGCTTATGCCTGAGCATTCAGTGTTGCCGGTGGGGGTGATTATAATTGGTGTCTTTATAGAGGCGATGATGATTTTTGTCCCTTTTTATTCCCTTTTGAGCTGATTAATTGAGCATTTGAGGTTATCTGATCCGTAACTTGGCGGGGCATACTTTTTTTTGCAGCCATGGCGTGGTTGGACTCTCTTTTTGCTCGAGCTTAACACAGATCTGAGCCTCAATTTGCTGGTCTCTTCATCAATTTCAATTGAGGGAGTATTATTAACAGCTTCAGGGTACTATAAGCTATTATTCATAAATTAAAAATGAGGCTAACATGGATTTTGAGGATTTTTATGTTGAAAGGGTGGTTGAG</genome_strand>
        <mrna_strand>TTTTATGAATACATCCCACCCATGGCTTAGAGGCTTTGGTCCAGCAGCATTAGTACAACAATTGTTGTGTAATAGGGGTGCATGTTGCCAGTTTGAAATATCCCTTTTGTTTAGGGATAAGAGTGCAACAGTTGGTGAGTACGATGCATGCCACAGATTTGAATTATGAAGCTTGGTATCTAAGCAGAGAAAGACAGATGGCCGGTGCAACATAGAGATTCAAACAAAAGTGAAATCTCTCTACTGTTTTTTGCTGATAATGTTCACAACTTCTATAGCCAAGTGAGACCATATGTAAAGTTGGAAAAATTGGTATAAAAGTAACCTATTTGGAGTTAGAGAAAAGTTGTTTTTGATATAATTTGCAAAAAGAGAACAATGAAAGTGAAGGTAAAATGTTGAAGATAATATGACAAACTAAAAAAGGAACAATCAGTATCAAAATTATACAATGAAGTGCAAGAAATATTAAAAGGGATGGAACAACAAGAAACTTCATGGAAATTTGATTATCCATCATCATACCTTCGCATCGGAACACCTGTACATCTCATTTTCACATATTCGAACTATATTCGAACTATCTTGACTGAGAAAATTATATTAAAAAGAATCTAAAAATTGTAAATGCAAATCTTTGTGTCCTAAAGAAATTGTTATTTTATACTTTCAACAAGATTAAAGTTGATTTTTTTAATGAAGATACTGTTCCTCTGGTAAAGATGGGAGTATTTTAGTTCAAGTGTTGGGTACTATATAAGCAAAACCTTAGGGCAATGGACAAAGCAAAAAGCTCAAAAGGGAAAGAATGAGGCTTAAAGAGAGTTTAAGGATTTCTCATTGAAAGGGTGGTTGCCACTCTCTACATCAGCCGATGATTTCTCCATTTATCTAAGAATTCCAACAACCTTTTTCTTATCAATTTTGAACAGAGGAAATATACAATTATCAGCTTTGTTTGAAATGGGTTTCTATGGCCTTTCAACTCTTTTTCCCTTTTTATTTCTTTATACTTATGCTTATGCCTGAGCATTCAGTGTTGCCGGTGGGGGTGATTATAATTGGTGTCTTTATAGAGGCGATGATGATTTTTGTCCCTTTTTATTCCCTTTTGAGCTGATTAATTGAGCATTTGAGGTTATCTGATCCGTAACTTGGCGGGGCATACTTTTTTTTGCAGCCATGGCGTGGTTGGACTCTCTTTTTGCTCGAGCTTAACACAGATCTGAGCCTCAATTTGCTGGTCTCTTCATCAATTTCAATTGAGGGAGTATTATTAACAGCTTCAGGGTACTATAAGCTATTACTCATAAATTAAAAATGAGGCTAACATGGATTTTGAGGATTTTTATGTTGAAAGGGTGGTTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U582569" ref_strand="+" ref_description="SGN-U582569 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157359513|emb|CAO67714.1| (e_value=8e-55) unnamed; (*ATH) AT2G22650.1 (e_value=6e-52) | Symbol: None | FAD-dependent oxidoreductase family protein | chr2:9631702-9634041 REVERSE | Aliases: T9I22.9, T9I22_9; ">
      <seq>tggcgcttataacccataacccatttttattttcaacaaaattatcacaaagtcgtggctatttacactctttaaacaaaagggtgtctttttcttcttcattcttgtctggcagatgtttttctgctgtttcacaaaagcctctcagatatgctgttcttggtgctggattagctggattgtctgtggtttggcatttgttgcaacaaacttcagaggaatcaaatttttgcatagacatatatgatgaagttggcattggtggaggtgcatctggaatgtctggtggactccttcatccctattcccccaaagttaagcttctgtggcggggagaagagtgctggaaagaaagtttaaagcttctaaatgttgctgaagatgctcgatcttccaagtccttagacatggttatgcctaaaactgggctaaaagaaggtgactctatagtcaggagaagcggaatcgtgagaccggtgctctctgagaaaaatatgcgcatgatgaatgataatgctcaaaactgcattgccagctgcagaattgagtcgatccacaaggatgctgcacaaaagcttgtacctgaattgtgtgtgcccctggacttagccttccatatgcctgaagccgtgaatgttaatcctcagaattatcttgaggctctctacttagcatgcaaaacttttgtgaaatccaagtgcagttttggcatttcatgtaaagagttaaatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="-" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="48052" stop="44586"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47752" g_stop="47605" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="148" r_length="148" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47604" i_stop="47516" i_length="89">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47515" g_stop="47458" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="149" r_stop="206" r_length="58" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="47457" i_stop="46481" i_length="977">
            <donor d_prob="0.839" d_score="0.98"/>
            <acceptor a_prob="0.265" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46480" g_stop="46372" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="315" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="46371" i_stop="46214" i_length="158">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="46213" g_stop="46069" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="316" r_stop="460" r_length="145" r_score="0.993"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="46068" i_stop="45339" i_length="730">
            <donor d_prob="0.969" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="45338" g_stop="45287" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="461" r_stop="512" r_length="52" r_score="0.981"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="45286" i_stop="45202" i_length="85">
            <donor d_prob="0.949" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="45201" g_stop="45055" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="513" r_stop="659" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="45054" i_stop="44961" i_length="94">
            <donor d_prob="0.857" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="44960" g_stop="44886" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="660" r_stop="734" r_length="75" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="-" ref_id="SGN-U582569" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>734</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U582569" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47752" e_stop="47605"/>
          <exon e_start="47515" e_stop="47458"/>
          <exon e_start="46480" e_stop="46372"/>
          <exon e_start="46213" e_stop="46069"/>
          <exon e_start="45338" e_stop="45287"/>
          <exon e_start="45201" e_stop="45055"/>
          <exon e_start="44960" e_stop="44886"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCGCTTATAACCCAAAACCCATTTTTATTTTCAACAAAATTATCACAAAGTCGTGGCTTTTTACACTCTTTTCACAAAAGGGTGTCTTTTTCTTCTTCATTCTTGTCTGTCAGATGTTTTTCTGCTGTTTCACAAAAGCCTCTCAGGTTAGTAAATAAGCCATATATAAATTGGTTTTTTCTTCTTTTTTTTTTTCCTGACTTAATGTTTTGTTTGGAATTGGATTTATATTCAGATATGCTGTTCTTGGTGCTGGATTTGCTGGATTGTCTGTGGTTTGGCATTTGTTGCAAGTATCCCCAATTCCCTACTTTGTCTTTACATATAGTTATTGCCTATGGAGTTCTTCTTGCACTTTATTAGGAGACAACAAAGTTAATAACTTTTGCATTAATCCTAAGGTGAAAAGGCTTTTAAGTTATAATGCTAGGCAGGGGCGGAACCAGGTAGCGCCAAAAGAGTTATCCTAACCCCACGGAAATTACATTGTTTAAGCATGTTTAGATTATGTTTTTTGATGTACATTTAGTAAACCCCTTTGGTTTTTCGTATGTTTACTTTATATTTTGAACGCACTGAATGAAACCAATGCTGTTAGTTTATGTTAGCTAATTACATGTAATTGTTTAACTAAGTAGATTGGTAACCTTAGAAATAGGGTAATTAATTTGTAAAATATATCTGGAGTATATGTATTTAGTAGGCATTTGGACATGAATTGAGTGATATTGGTAAAATATTGTATTTTAAGTTGAGTTAAAAATTGGTATTTCGAAGTTGAAGTTGTGTTTGAACATGTATTTCACTTGAAAATATTTTGAAGTTTCCTGGCGGGAAAATGAGTTCTCCTCTATCGGAAACAACCTTTCTATCCCACAAAGATAGGGTAGAGTCTGCATAGCCCTCCACAGACGCTACTTGTGGTAGGTATGTTGTTGTTGTCCATGGGAAAATTTCTCTGCACCACTTTTTCAAGTTTGGAGTAAAAACTGAAACAATGTTTAACCAAACAGGTTTTTGTGGATTTTTTTTGAGAAGAGGCAAAAAAATAAGTTGTCCAAATGGGCCCGATCATTCTTTTTAAAAATTCGTTTTATCCAAGTCTAGAAAATCCTTATACTATTAGCATATATAACTTAATTCCGTTGACAGATTAGTTTTATCTGTGAGTCTTAATGCCAAGTTACATATGGCAGCTTCTTTTTTCCTTTTCTATTCAATTAGCATAGGCCGCTAATTACAGCTGCTGCATCTTTTTTGTGTTGCATAGCAAACTTCAGAGGAATCAAATTTTTGCATAGACATATATGATGAAGTTGGCATTGGTGGAGGTGCATCTGGAATGTCTGGTGGACTCCTTCATCCCTATTCCCCCAAAGGTACATGCGAACGGTTTTTTATCAGGAGGAGACAACTCATTGAACTTCAAAGTTCTTCCTTCAAATTAGTTCCATTTATTCGTCTCTTAGCATTCACTTAAAGTAAAGGAATTTATTTTGATATAATCCCTTTCTGAGATTTAACTCACAATTTGCAGTTAAGCTTCTGTGGCGGGGAGAAGAGTGCTGGAAAGAAAGTTTAAAGCTTCTAAATGTTGCTGAAGATGCTCGATCTTCCAAGTCCTTAGACATGGTTATGCCTAAAACTGGGCTAAAAGAAGGTGACTTTATAGTCAGGAGAAGGTTAGTAGTATAAAACATGCAATATGTGAACTGCTAGGACGTTTCTCTCTCTCTCTCTCTCTCTTTTTAATAATAATAAGATCTCATTGATGTTTGCGCAAAAATAGAATACATTGAATATAATACCAAAATGTAGAAAACTTAGAAAAGATATGTTTTTCTAAAAACAGCACACAAGTCTTATGTACCTACAGGGATCTTATGGGGGCACCTAAAGAGAATAAGGGATAAGAGGCTAATCCTCACCTGTTCTGCTAAGACATTTGGTATATAATTTTGGTTATATTGGTAATAAATTCAAATTCTAGATGTTAAAATGTGATTCCTTTTCTGTTTGATGTTAGTATTTTCAGTTTAAATTACTGACAAAAAAGTTTAGTTTAAATAATTACTGTTCCGCCCTGCGAAAAATTGCTTTGACATCCATTTATCTTTAGCATCAGATAAAAAAAACATATCATTCTATTAGCAAATCGCTTGTTTCTGTTAACTTGTGTGTTCTGCAGTAGTCATCACTCGTGATTGAACTGCAGTAGTTTATCTGAGCTTACAAGTGAACCTTTTCTTTCTTTAAATATGTTCACTTCCACAAGTTAGAAACTGTCATGTACACTTAACCCACTCCCCTATCTTTTGGTCCTTCATTGTGCTGATACTTTCTTTGTACTATATGGAAGAGGTATAACCATCTTTTTACAGTCTAAAAATATTAATTTTGAATGATCAACAGCGGAATCGTGAGACCGGTGCTCTCTGCGAAAAATATGCGCATGATGAATGATGTGAGTGCATCAACTTATTACATGCGACTAGAAACTTATATGTAATTTCATGATTATGGGTATTTGTCTTCTTTTCCTTGAGTAGAATGCTCAAAACTGCATTGCCAGCTGCAGAATTGAGTCGATCCACAAGGATGCTGCACAAAAGCTTGTACCTGAATTGTGTGTGCCCCTGGACTTAGCCTTCCATATGCCTGAAGCCGTGAATGTTAATCCTCAGAATTATCTTGAGGTTTGAAGGGAGAAATCTTGTAACTATAGAACTCTGAATAGGTCTTTTTCCTTTATACCATTAAAGTTTTTCTTACTTTTTGATTATCTTCCAGGCTCTCTACTTAGCATGCAAAACTTTTGTGAAATCCAAGTGCAGTTTTGGCATTTCATGTAAAGAGTTAAATTTG</genome_strand>
        <mrna_strand>TGGCGCTTATAACCCATAACCCATTTTTATTTTCAACAAAATTATCACAAAGTCGTGGCTATTTACACTCTTTAAACAAAAGGGTGTCTTTTTCTTCTTCATTCTTGTCTGGCAGATGTTTTTCTGCTGTTTCACAAAAGCCTCTCAG.........................................................................................ATATGCTGTTCTTGGTGCTGGATTAGCTGGATTGTCTGTGGTTTGGCATTTGTTGCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACTTCAGAGGAATCAAATTTTTGCATAGACATATATGATGAAGTTGGCATTGGTGGAGGTGCATCTGGAATGTCTGGTGGACTCCTTCATCCCTATTCCCCCAAAG..............................................................................................................................................................TTAAGCTTCTGTGGCGGGGAGAAGAGTGCTGGAAAGAAAGTTTAAAGCTTCTAAATGTTGCTGAAGATGCTCGATCTTCCAAGTCCTTAGACATGGTTATGCCTAAAACTGGGCTAAAAGAAGGTGACTCTATAGTCAGGAGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAATCGTGAGACCGGTGCTCTCTGAGAAAAATATGCGCATGATGAATGAT.....................................................................................AATGCTCAAAACTGCATTGCCAGCTGCAGAATTGAGTCGATCCACAAGGATGCTGCACAAAAGCTTGTACCTGAATTGTGTGTGCCCCTGGACTTAGCCTTCCATATGCCTGAAGCCGTGAATGTTAATCCTCAGAATTATCTTGAG..............................................................................................GCTCTCTACTTAGCATGCAAAACTTTTGTGAAATCCAAGTGCAGTTTTGGCATTTCATGTAAAGAGTTAAATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U599035" ref_strand="+" ref_description="SGN-U599035 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>aaggggaaaaaagacttggaaacccatttacttcctctgtttagtgagaggtttgttgggattcttactataatggagaaatcattgactggatgaatgcaggagagaggcaaccacccatttcaacgaaaatccctgttaacctcattcttatagtgaccctgaggctggtaatactacccctcagtttaaattgacgaagagaagctcatatctgtgttgaacaagagtataaagagagtccaaccacgccatggctgcaaaaaccagcatgccccgccaagatacaggtcggataacctccaatgctcaattaatcagctcataatggaataaaagttacaaaaatcatcatcgcctcttcctagccatccgaagcaataaaatcaactgttagacgaaatataattgaacaagaatatggatttaaggcgtgaagaatcgctttccttaaaagagatattgcacgtgtacatattgggataatactagcaactgccttcaagatacaacaaagtccttatatatacatgcatatttgtctctttggcctacttctggagagtgcttatatttatgaacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="+" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="48647" stop="49823"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48943" g_stop="49523" g_length="581"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="584" r_length="584" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="+" ref_id="SGN-U599035" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>581</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U599035" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48943" e_stop="49523"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATGGAAAAAAGACTTGGAAACCCATTTACTTCCTCTGTTTAGTGAGAGGTTTGTTGGGATTCTTACAATAATGGAGAAATCATTGACTGGATGAATGCA-GAGAGAGGCAACCACCC-TTTCAACGAAAATCCCTGTTAGCCTCATTCTTATAGT-ACCCTGAGGCTGGTAATACTACCCCTCAGTTTAAATTGACGAAGAGAAGCTCAGATCTGTGTTGAACAAGAGTATAAAGAGAGTCCAACCACGCCATGGCTGCAAAAACCAGCATGCCCCGCCAAGATACAGGTCGGATAACCTCCAATGCTCAATTAATCAGCTCAGAAGGGAATAAAAGTTACAAAAATCATCATCGCCTCTTCCTAGCCATCCGAAGCAATAAAATCAACTGTTAGAGGAAATATAATTGAAGAAGAAGATGGATTTAAGGCGTGAAGAATCGCTTTCCTTAAAAGAGATATTGCACGTGTACATATTGGGAAAATACTAGCAACTGCCTTCAAGATACAACAAAGTCCTTATATATACATGCATATTTTTCTCTTTGGCCTACTTCTGGAGAGTGTTTATATTTATAAACCT</genome_strand>
        <mrna_strand>AAGGGGAAAAAAGACTTGGAAACCCATTTACTTCCTCTGTTTAGTGAGAGGTTTGTTGGGATTCTTACTATAATGGAGAAATCATTGACTGGATGAATGCAGGAGAGAGGCAACCACCCATTTCAACGAAAATCCCTGTTAACCTCATTCTTATAGTGACCCTGAGGCTGGTAATACTACCCCTCAGTTTAAATTGACGAAGAGAAGCTCATATCTGTGTTGAACAAGAGTATAAAGAGAGTCCAACCACGCCATGGCTGCAAAAACCAGCATGCCCCGCCAAGATACAGGTCGGATAACCTCCAATGCTCAATTAATCAGCTCATAATGGAATAAAAGTTACAAAAATCATCATCGCCTCTTCCTAGCCATCCGAAGCAATAAAATCAACTGTTAGACGAAATATAATTGAACAAGAATATGGATTTAAGGCGTGAAGAATCGCTTTCCTTAAAAGAGATATTGCACGTGTACATATTGGGATAATACTAGCAACTGCCTTCAAGATACAACAAAGTCCTTATATATACATGCATATTTGTCTCTTTGGCCTACTTCTGGAGAGTGCTTATATTTATGAACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U582544" ref_strand="+" ref_description="SGN-U582544 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>gtttaagtatgaggcggcggtgaaagcacagaggattagggagtttcaatgggtggttttgccactctgttattctctgctgccgatgatcactcaaaatgattgcaaaaaaccacccttttggtgaacttccactagaccttcctttgttcccaattgctgttaccccctcagtcccaatctgtcaggctatgaagatttgaaagaatttgtcttctttggaagatgaatcagacatatatttccattgagctggaaaaaaattgtatcttggcgtggcagttcagatgggtctggtgagaaaggaggagaaagtattcttttctgtctcataaatctaactgaagattgcagccatgacgctgtctttttaaaagctttttggttttgtctgagaaaaggcgaatctgagccttatctcattagtttgagtctgaggctgtgtgaaagcagagagctttagggagttccaatgggtggtttgccgctctctgttactctttgatgccgatgatcactcaaatgattacaaaaaacacccttccatttgttacaccctatgtttttttttgtttgctacttcctacgtctcaaattatgttcaatgatgcaatgaagaattaaagtttcttgtcttctttggaagatgaaacagacatataaactcattgagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="-" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="52846" stop="51573"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52546" g_stop="51873" g_length="674"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="675" r_length="675" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="-" ref_id="SGN-U582544" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>674</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U582544" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52546" e_stop="51873"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTAAGTATGAGGCGGCGGTGAAAGCACAGAGGATTAGGGAGTTTCAATGGGTGGTTTTGCCACTCTGTTATTCTCTGCTGCCGATGATCACTCAAAATGATTGCAAAAAACCACCCTTTTGGTGAACTTCCACTAGACCTTCCTTTGTTCCCAATTGCTGTTA-CCCCTCAGTCCCAATCTGTCAGGCTATGAAGATTTGAAAGAATTTGTCTTCTTTGGAAGATGAATCAGACATATATTTCCATTGAGCTGGAAAAAAATTGTATCTTGGCGTGGCAGTTCAGATGGGTCTGGTGAGAATGGAGGAGAAAGTATTCTTTTCTGTCTCATAAATCTAACTGAAGATTGCAGCCATGACGCTGTCTTTTTAAAAGCTTTTTGGTTTTGTCTGAGAAAAGGCGAATCTGAGCCTTATCTCATTAGTTTGAGTCTGAGGCTGTGTAAAAGCAGAGAGCTTTAGGGAGTTCCAATGGGTGGTTTGCCGCTCTCTGTTACTCTTTGATGCCGATGATCACTCAAATGATTACAAAAAACACCCTTCCATTTGTTACACCCTATGTTTTTTTTTGGTTGCTACTTCCTACGTCTCAAATTATGTTCAAGGAGGCAATGAAGAATTAAAGTTTCTTGTCTTCTTTGGAAGATGAAACAGACATATAAACTCATTGAGCT</genome_strand>
        <mrna_strand>GTTTAAGTATGAGGCGGCGGTGAAAGCACAGAGGATTAGGGAGTTTCAATGGGTGGTTTTGCCACTCTGTTATTCTCTGCTGCCGATGATCACTCAAAATGATTGCAAAAAACCACCCTTTTGGTGAACTTCCACTAGACCTTCCTTTGTTCCCAATTGCTGTTACCCCCTCAGTCCCAATCTGTCAGGCTATGAAGATTTGAAAGAATTTGTCTTCTTTGGAAGATGAATCAGACATATATTTCCATTGAGCTGGAAAAAAATTGTATCTTGGCGTGGCAGTTCAGATGGGTCTGGTGAGAAAGGAGGAGAAAGTATTCTTTTCTGTCTCATAAATCTAACTGAAGATTGCAGCCATGACGCTGTCTTTTTAAAAGCTTTTTGGTTTTGTCTGAGAAAAGGCGAATCTGAGCCTTATCTCATTAGTTTGAGTCTGAGGCTGTGTGAAAGCAGAGAGCTTTAGGGAGTTCCAATGGGTGGTTTGCCGCTCTCTGTTACTCTTTGATGCCGATGATCACTCAAATGATTACAAAAAACACCCTTCCATTTGTTACACCCTATGTTTTTTTTTGTTTGCTACTTCCTACGTCTCAAATTATGTTCAATGATGCAATGAAGAATTAAAGTTTCTTGTCTTCTTTGGAAGATGAAACAGACATATAAACTCATTGAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U602972" ref_strand="+" ref_description="SGN-U602972 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gatttcttgtgtatctaatgcattgtgcatatgtttcggttgtcggtcctcactggctctgtttcaatgcaatgcaaacagagtacatgttcataatgccagcaagaggaaacaatgaggctatgatgatagttttgctgagctctttgagtcgggcataagagttctgtagctgctgtggcggggcaatctgaatttctggaaatttgcagctatggctgggcacaaagaactcaaagcccgaagacataatctgagcctcttgcatcatttctccattaccaaaaccaacagccctcttctagtccttttcctttcttcactatagaaaacagagggagcattaacatcagcagcagcagcagcagtagttggacctcattctgatttatgagctcaggtccaaagcatctcaaattccccgaatcctatgctaccagaatcaacgaagcagatgatatttgcttatcttggcttaaaaaaaggttgttcgggtttacagacaagtagatctgtatcttggcttggcaaaaacccatgatggtatgtgatttgagactcctcgatcacatgcaactggttcttttgcagctatggcgttgtctcctctctctctttgaccattcattagtagccagctgcgagtgtcaaaattgccagtaattcttctggacattgtttgatggggaaatcgttaaatgagacatcattgatgagaaatgtgaataaattattttttgattcggttttgctggtaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="-" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="55057" stop="53700"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54758" g_stop="54000" g_length="759"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="759" r_length="759" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="-" ref_id="SGN-U602972" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>759</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U602972" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54758" e_stop="54000"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTTCTTGTGTATCTAATGCATTGTGCATATGTTTCGGTTGTCGGTCCTCACTGGCTCTGTTTCAATGCAATGCAAACAGAGTACATGTTCATAATGCCAGCAAGAGGAAACAATGAGGCTATGATGATAGTTTTGCTGAGCTCTTTGAGTCGGGCATAAGAGTTCTGTAGCTGCTGTGGCGGGGCAATCTGAATTTCTGGAAATTTGCAGCTATGGCTGGGCACAAAGAACTCAAAGCCCGAAGACATAATCTGAGCCTCTTGCATCATTTCTCCATTACCAAAACCAACAGCCCTCTTCTAGTCCTTTTCCTTTCTTCACTATAGAAAACAGAGGGAGCATTAACATCAGCAGCAGCAGCAGCAGTAGTTGGACCTCATTCTGATTTATGAGCTCAGGTCCAAAGCATCTCAAATTCCCCGAATCCTATGCTACCAGAATCAACGAAGCAGATGATATTTGCTTATCTTGGCTTAAAAAAAGGTTGTTCGGGTTTACAGACAAGTAGATCTGTATCTTGGCTTGGCAAAAACCCATGATGGTATGTGATTTGAGACTCCTCGATCACATGCAACTGGTTCTTTTGCAGCTATGGCGTTGTCTCCTCTCTCTCTTTGACCATTCATTAGTAGCCAGCTGCGAGTGTCAAAATTGCCAGTAATTCTTCTGGACATTGTTTGATGGGGAAATCGTTAAATGAGACATCATTGATGAGAAATGTGAATAATTTATTTTTTGATTCGGTTTTGCTGGTAAG</genome_strand>
        <mrna_strand>GATTTCTTGTGTATCTAATGCATTGTGCATATGTTTCGGTTGTCGGTCCTCACTGGCTCTGTTTCAATGCAATGCAAACAGAGTACATGTTCATAATGCCAGCAAGAGGAAACAATGAGGCTATGATGATAGTTTTGCTGAGCTCTTTGAGTCGGGCATAAGAGTTCTGTAGCTGCTGTGGCGGGGCAATCTGAATTTCTGGAAATTTGCAGCTATGGCTGGGCACAAAGAACTCAAAGCCCGAAGACATAATCTGAGCCTCTTGCATCATTTCTCCATTACCAAAACCAACAGCCCTCTTCTAGTCCTTTTCCTTTCTTCACTATAGAAAACAGAGGGAGCATTAACATCAGCAGCAGCAGCAGCAGTAGTTGGACCTCATTCTGATTTATGAGCTCAGGTCCAAAGCATCTCAAATTCCCCGAATCCTATGCTACCAGAATCAACGAAGCAGATGATATTTGCTTATCTTGGCTTAAAAAAAGGTTGTTCGGGTTTACAGACAAGTAGATCTGTATCTTGGCTTGGCAAAAACCCATGATGGTATGTGATTTGAGACTCCTCGATCACATGCAACTGGTTCTTTTGCAGCTATGGCGTTGTCTCCTCTCTCTCTTTGACCATTCATTAGTAGCCAGCTGCGAGTGTCAAAATTGCCAGTAATTCTTCTGGACATTGTTTGATGGGGAAATCGTTAAATGAGACATCATTGATGAGAAATGTGAATAAATTATTTTTTGATTCGGTTTTGCTGGTAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U596270" ref_strand="+" ref_description="SGN-U596270 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ggggaggcagtgatgatattgttcttggcaaacaaaagctaagttgagcatagcctagaaaggaagaagaatgaggcatctgagaaattgggactttctgaaagggtggttgcccctctctgctatgccagtgaattctccgttaatggaccataaaaaccaacagcccttcgaaataaacaagaaaaaacaaaaaaccttcataccaaacacaaccttatactcttcttgctcttcctctttcttctctctttgtgctgctaatgttgtgaaggggctatgatgattgttgcttcttttctgggttatattcaatcatggtaattgagaaaatatcctaccgtatcttggcatggcgacctggttaggctttgaagagcaaactggtgtctgcagccatggcggcgtcactcttctcttgttcaagtacagcaaatctgagccctccataacccattactacaacaacatatccggaagtggtgtgggggaagatggtgtctgtgcagcctttaccccnacccattcgggtcggaaaatccattacggatttccaatgaaatttcaactctgaagaatgaggcgtcagagaatgggnatttctgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="-" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="59354" stop="58152"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59057" g_stop="58452" g_length="606"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="607" r_length="607" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="-" ref_id="SGN-U596270" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>606</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U596270" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59057" e_stop="58452"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGAGGCAGTGATGATATTGTTCTTGGCAAACAAAAGCTAAGTTGAGCATAGCCTAGAAAGGAAGAAGAATGAGGCATCTGAGAAATTGGGACTTTCTGAAAGGGTGGTTGCCCCTCTCTGCTATGCCAGTGAATTCTCCGTTAATGGACCATAAAAACCAACAGCCCTTCGAAATAAACAAGAAAAAACAAAAAACCTTCATACCAAACACAACCTTATACTCTTCTTGCTCTTCCTCTTTCTTCTCTCTTTGTGCTGCTAATGTTGTGAAGGGGCTATGATGATTGTTGCTTCTTTTCTGGGTTATATTCAATCATGGTAATTGAGAAAATATCCTACCGTATCTTGGCATGGCGACCTGGTTAGGCTTTGAAGAGCAAACTGGTGTCTGCAGCCATGGCGGCGTCACTCTTCTCTTGTTCAAGTACAGCAAATCTGAGCCCTCAATAACCCATTACTACAACAACATATCCGGAAGTGGTGTGGGGGAAGATGGTGTCTGTGCAGCCTTTACCCCAACCCATTCGGGTCGGAAAATCCATTACGGATTTCCAATGAAATTTCAACTCTGAAGAATGAGGCGTCAGAGAATGGG-ATTTCTGTA</genome_strand>
        <mrna_strand>GGGGAGGCAGTGATGATATTGTTCTTGGCAAACAAAAGCTAAGTTGAGCATAGCCTAGAAAGGAAGAAGAATGAGGCATCTGAGAAATTGGGACTTTCTGAAAGGGTGGTTGCCCCTCTCTGCTATGCCAGTGAATTCTCCGTTAATGGACCATAAAAACCAACAGCCCTTCGAAATAAACAAGAAAAAACAAAAAACCTTCATACCAAACACAACCTTATACTCTTCTTGCTCTTCCTCTTTCTTCTCTCTTTGTGCTGCTAATGTTGTGAAGGGGCTATGATGATTGTTGCTTCTTTTCTGGGTTATATTCAATCATGGTAATTGAGAAAATATCCTACCGTATCTTGGCATGGCGACCTGGTTAGGCTTTGAAGAGCAAACTGGTGTCTGCAGCCATGGCGGCGTCACTCTTCTCTTGTTCAAGTACAGCAAATCTGAGCCCTCCATAACCCATTACTACAACAACATATCCGGAAGTGGTGTGGGGGAAGATGGTGTCTGTGCAGCCTTTACCCCNACCCATTCGGGTCGGAAAATCCATTACGGATTTCCAATGAAATTTCAACTCTGAAGAATGAGGCGTCAGAGAATGGGNATTTCTGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U573644" ref_strand="+" ref_description="SGN-U573644 Tomato 200607#2 [19 ESTs aligned] ">
      <seq>gaaaagaagcaaagaaaaggttagcccagaaaagaaaaaagaggcaaaacagagagtttttggattttattaacaagggtggttgcccctctcttgtttagcctatgaatgattcttttagagatgaagcaacaacccttgaattcatgttaatttcctgggaattattggaacatgcatgccatacatacatacatacaacaaacatacatatattcctcaactttccaattctacatctatgccattctcttttttgttaattaattactcactctttgttggtgtttgatctattgaggctgtgatgatgatgatgatgggctaaccggatcgggcttggagattatgcgactcgtatcttggcttggcaaattttgcagccatggcgtggtcgtctctctctttgttccgatctctttgcagatctgagccttttggacacatgcatgtgtttctgggaaatgactgaattattgaacatggaaaattaaaccttttcttcaacttcaacaactatggttacaaactctgtttcttctgtgtttttttttatccaaataatgagaggcgatgatgaagataatgatttctttggattctgggctaatcgggtcgggtatgaagattatacgacccgtatcttggcttggcaaattttgcagccatggcgtggtcggctctcttctacctcgatttcttttgcagatctgagcctctaaattcataatgaataacttttggattcatacaaaacttttgctggaaattgatatttcattcaaaactcgtctttgtttgtttgtattttgtattttctcatttttgatccataaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="-" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="65222" stop="63800"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64922" g_stop="64112" g_length="811"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="811" r_length="811" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="-" ref_id="SGN-U573644" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>811</cumulative_length_of_scored_exons>
        <coverage percentage="0.969" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U573644" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64922" e_stop="64112"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAGAAGCAAAGAAAAGGTTAGCCCAGAAAAGAAAAAAGAGGCAAAACAGAGAGTTTTTGGATTTTATTAACAAGGGTGGTTGCCCCTCTCTTGTTTAGCCTATGAATGATTCTTTTAGAGATGAAGCAACAACCCTTGAATTCATGTTAATTTCCTGGGAATTATTGGAACATGCATGCCATACATACATACATACAACAAACATACATATATTCCTCAACTTTCCAATTCTACATCTATGCCATTCTCTTTTTTGTTAATTAATTACTCACTCTTTGTTGGTGTTTGATCTATTGAGGCTGTGATGATGATGATGATGGGCTAACCGGATCGGGCTTGGAGATTATGCGACTCGTATCTTGGCTTGGCAAATTTTGCAGCCATGGCGTGGTCGTCTCTCTCTTTGTTCCGATCTCTTTGCAGATCTGAGCCTTTTGGACACATGCATGTGTTTCTGGGAAATGACTGAATTATTGAACATGGAAAATTAAACCTTTTCTTCAACTTCAACAACTATGGTTACAAACTCTGTTTCTTCTGTGTTTTTTTTTATCCAAATAATGAGAGGCGATGATGAAGATAATGATTTCTTTGGATTCTGGGCTAATCGGGTCGGGTATGAAGATTATACGACCCGTATCTTGGCTTGGCAAATTTTGCAGCCATGGCGTGGTCGGCTCTCTTCTACCTCGATTTCTTTTGCAGATCTGAGCCTCTAAATTCATAATGAATAACTTTTGGATTCATACAAAACTTCTGCTGGAAATTGATATTTCATTCAAAACTCGTCTTTGTTTGTTTGTATTTT</genome_strand>
        <mrna_strand>GAAAAGAAGCAAAGAAAAGGTTAGCCCAGAAAAGAAAAAAGAGGCAAAACAGAGAGTTTTTGGATTTTATTAACAAGGGTGGTTGCCCCTCTCTTGTTTAGCCTATGAATGATTCTTTTAGAGATGAAGCAACAACCCTTGAATTCATGTTAATTTCCTGGGAATTATTGGAACATGCATGCCATACATACATACATACAACAAACATACATATATTCCTCAACTTTCCAATTCTACATCTATGCCATTCTCTTTTTTGTTAATTAATTACTCACTCTTTGTTGGTGTTTGATCTATTGAGGCTGTGATGATGATGATGATGGGCTAACCGGATCGGGCTTGGAGATTATGCGACTCGTATCTTGGCTTGGCAAATTTTGCAGCCATGGCGTGGTCGTCTCTCTCTTTGTTCCGATCTCTTTGCAGATCTGAGCCTTTTGGACACATGCATGTGTTTCTGGGAAATGACTGAATTATTGAACATGGAAAATTAAACCTTTTCTTCAACTTCAACAACTATGGTTACAAACTCTGTTTCTTCTGTGTTTTTTTTTATCCAAATAATGAGAGGCGATGATGAAGATAATGATTTCTTTGGATTCTGGGCTAATCGGGTCGGGTATGAAGATTATACGACCCGTATCTTGGCTTGGCAAATTTTGCAGCCATGGCGTGGTCGGCTCTCTTCTACCTCGATTTCTTTTGCAGATCTGAGCCTCTAAATTCATAATGAATAACTTTTGGATTCATACAAAACTTTTGCTGGAAATTGATATTTCATTCAAAACTCGTCTTTGTTTGTTTGTATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U595365" ref_strand="+" ref_description="SGN-U595365 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ggtgttttgcagccatggcgagactggcttctcttttgccatatcattacatacatctgagccacaatttgttgaagaacataagtaggcatttggacattattgcagttaaattctcttaaatgcagacttgtgacgtctcgtcagttagaagctctaatctaaacgaacttccttcttttagcaggaatgacgagtatgaggcagcagagagtatgggatttctttcaagggtggttgcccctctctactttgcctatgattctacccttctcaacaaaccaacagcccttaagaaaagaaaaaagagaaaattttttccacttcagtttcttggtttcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="-" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="68588" stop="67645"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68288" g_stop="67945" g_length="344"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="344" r_length="344" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="-" ref_id="SGN-U595365" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>344</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U595365" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68288" e_stop="67945"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTGTTTTGCAGCCATGGCGAGACTGGCTTCTCTTTTGCCATATCATTACATACATCTGAGCCACAATTTGTTGAAGAACATAAGTAGGCATTTGGACATTATTGCAGTTAAATTCTCTTAAATGCAGACTTGTGACGTCTCGTCAGTTAGAAGCTCTAATCTAAACGAACTTCCTTCTTTTAGCAGGAATGACGAGTATGAGGCAGCAGAGAGTATGGGATTTCTTTCAAGGGTGGTTGCCCCTCTCTACTTTGCCTATGATTCTACCCTTCTCAACAAACCAACAGCCCTTAAGAAAAGAAAAAAGAGAAAATATATTCCACTTCAGTTTCTTGGTTTCTTT</genome_strand>
        <mrna_strand>GGTGTTTTGCAGCCATGGCGAGACTGGCTTCTCTTTTGCCATATCATTACATACATCTGAGCCACAATTTGTTGAAGAACATAAGTAGGCATTTGGACATTATTGCAGTTAAATTCTCTTAAATGCAGACTTGTGACGTCTCGTCAGTTAGAAGCTCTAATCTAAACGAACTTCCTTCTTTTAGCAGGAATGACGAGTATGAGGCAGCAGAGAGTATGGGATTTCTTTCAAGGGTGGTTGCCCCTCTCTACTTTGCCTATGATTCTACCCTTCTCAACAAACCAACAGCCCTTAAGAAAAGAAAAAAGAGAAAATTTTTTCCACTTCAGTTTCTTGGTTTCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U595366" ref_strand="+" ref_description="SGN-U595366 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>cttgagcctcaggagaaagaattagccgaaagatgcttgaagtcttgtgaattcccttttgttaggtcagcctaaaaaaggcaagaatgaggcagcagagagtatgggatttctatcaagggtggttggccttctctctatgctttacttgtgattcttcatttctcaaaacaaaccaacagcccttcaaaagaaagagacagagagagtacaattgagtttctgggtttatttgcagtttgcacccttaaacatatgtcataagggaatatacacaactatacaacaacaactataaaatgactatgaaaactattaaagaggcagtgatgatttctgggctagcaagatttcgggcatggagagtacccaacccgtaccttggcatgacaacacggtatggcctgtaattgagacgcataactcacacatgcaatcgtgcgttgcagccatggcatggttggcttctctttttcctcgtcattacacaaatctgagcctcaatttgctaaagaaaaaagggaaaatgatcaaatttgcccctttactatgatcaaagtgggagatatcgaggtcttctcgttttaagctctcatataagcaaattccatctattaggtttgcccagaaatagagagaatgaggctgcagagagtatgggatttctttcaagggtggttgcccctgtctngcttgcctatgattctccccttctcaacaaccaacagccttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="-" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="69674" stop="68324"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69376" g_stop="68624" g_length="753"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="734" r_length="734" r_score="0.910"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="-" ref_id="SGN-U595366" ref_strand="+">
        <total_alignment_score>0.910</total_alignment_score>
        <cumulative_length_of_scored_exons>753</cumulative_length_of_scored_exons>
        <coverage percentage="1.026" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U595366" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69376" e_stop="68624"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGAGCCTCAGGAGAAAGAATTAGCCGAAAGATGCTTGAAGTCTTGTGAATTCCCTTTTGTTAGGTCAGCCTATAAAAGGCAAGAATGAGGCAGCAGAGAGTATGGGATTTCTATCAAGGGTGGTTGGCCTTCTCTCTATGCTTTGCTTATGATTCTCCATTTCTCAAAACAAACCAACAGCCCTTCAAAAGAAAGAGACAGAGAGAGTACAATTGAGTTTCTGGGTTTATTTGCAGTTTGCA-CC--ACCCTTAAGACAT-A-TG--TATACACAACTAT---ACTACAACTATAAAATGACTATGAAAACTATTAAAGAGGCAGTGATGATTTCTGGGCTAGCAAGATTTCGGGCATGGAGAGTACCCAACCCGTACCTTGGCATGACAACACGGTATGGCCTGTAATTGAGACGCATAACTCACACATGCAATCGTGCGTTGCAGCCATGGCATGGCTGGCTTCTCTTTTTCCTCGTCATTACACAAATCTGAGCCTCAATTTGCTAAAGAAAAAAAGGGAAAATGATCAAATTTGCCCCTTTACTATGCATAAGGGGCAATATCTTTTCCATGATCAAAGTGGGAGATATTGAGGTCTTCTCGTTTTAAGCTCTCATACAAGCAAATTCCATCTATTAGGTTTGCCCAGAAATAGAGAGAATGAGGCTGCAGAGAGAGTATGGGATTTCTTTCAAGGGTGGTTGCCCCTGTCTGCTTTGCCTATGATTCTCCCCTTCTCAACAAACCAACAGCCTTTA</genome_strand>
        <mrna_strand>CTTGAGCCTCAGGAGAAAGAATTAGCCGAAAGATGCTTGAAGTCTTGTGAATTCCCTTTTGTTAGGTCAGCCTAAAAAAGGCAAGAATGAGGCAGCAGAGAGTATGGGATTTCTATCAAGGGTGGTTGGCCTTCTCTCTATGCTTTACTTGTGATTCTTCATTTCTCAAAACAAACCAACAGCCCTTCAAAAGAAAGAGACAGAGAGAGTACAATTGAGTTTCTGGGTTTATTTGCAGTTTGCACCCTTAAACATATGTCATAAGGGAATATACACAACTATACAACAACAACTATAAAATGACTATGAAAACTATTAAAGAGGCAGTGATGATTTCTGGGCTAGCAAGATTTCGGGCATGGAGAGTACCCAACCCGTACCTTGGCATGACAACACGGTATGGCCTGTAATTGAGACGCATAACTCACACATGCAATCGTGCGTTGCAGCCATGGCATGGTTGGCTTCTCTTTTTCCTCGTCATTACACAAATCTGAGCCTCAATTTGCTAAAG-AAAAAAGGGAAAATGATCAAATTTG-CCC----C--T---T---------TA-C---T--ATGATCAAAGTGGGAGATATCGAGGTCTTCTCGTTTTAAGCTCTCATATAAGCAAATTCCATCTATTAGGTTTGCCCAGAAATAGAGAGAATGAGGCTGC--AGAGAGTATGGGATTTCTTTCAAGGGTGGTTGCCCCTGTCTNGCTTGCCTATGATTCTCCCCTTCTCAAC-AACCAACAGCCTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U563274" ref_strand="-" ref_description="SGN-U563274 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|147863604|emb|CAN81922.1| (e_value=3e-46) hypothetical; (*ATH) AT5G58040.1 (e_value=1e-27) | Symbol: None | fip1 motif-containing protein, contains Pfam profile PF05182: Fip1 motif | chr5:23505974-23511226 FORWARD | Aliases: K21L19.3, K21L19_3; ">
      <seq>gcttagttgtaagttgtaaccacttgcagcttgttgtgagctcaaattggaacttatttcaaaattgacttggattctttgatatttgtgagctcaaagggaaaatttgtgcaaggaaccaatgacaacaagatccacaggaatcgccaatcctccaagaaacatcaggaagcagcttcatcagacgatgagcaggaggattccaggaggggacgttccaagttggaacgatggacaagccacaaggaaagagactttggtatcaatgctaaatcatcttccttgaacatgaaagacagcaatgtacacaagggcaccggtacttcattagctaacaaaaatcaagatgaagctttaaagatggtcgaagaaaatcaacaacctgcagctaactataaaaatggaggtgcccctgagattaatagcctagaaacaaagcctgtggaggataaacatttggagacagttgagaagttgaagaagcgtagtgagcgcttcaagcttccaatgccaagtgagaaagaagctccagtaagtaaaaaggtggaaggtgatccattatcctcagttcaaagcgaaacccctccagattcagaggtgaagccagagcgtccagcacgcaggaggagatggacaagcagttaaatgaggaattcaaggaacatctttgtttgatggcttatttcctactcatggagtatatgccctccttggctaatgttttaccaatgtgcttgtcaacttaaggaagcctgtactgctgttgtctattctggatctgaggtttgtgtagacctcccatagtagatttgggtatctgtaaccatgttcagattatctatttggttttcttatttctgtaatacatgtatataccagtaagcctaacatcatagtggcccattgttggggtgccag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="-" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="77907" stop="75909"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77608" g_stop="77522" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="87" r_length="87" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="77521" i_stop="77040" i_length="482">
            <donor d_prob="0.244" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77039" g_stop="76209" g_length="831"/>
          <reference_exon_boundary r_type="cDNA" r_start="88" r_stop="918" r_length="831" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="-" ref_id="SGN-U563274" ref_strand="-">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>918</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U563274" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="77608" e_stop="77522"/>
          <exon e_start="77039" e_stop="76209"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTTAGTTGTAAGTTGTAACTACTTGCAGCTTGTTGTGAGCTCAAATTGGAACTTATTTCAAAATTGACTTGGATTCTTTGATATTTGTAAGCTTGTACTCTCAAACATTCTTGGTTATTACAGAAATGTCTGTTGACTAGATTGTAGGTGCACTTAATCATGAACTAATGCTGTGGGACAATTAAAAACTAATTTCTAGATGCAGAAGGTGCATTTGGATTCCAAAACATCATGATGGATTAGTTGGAAGTATTGTTCTGAAAAACTAAGTTTAGATTGTTGTCTAAAAGATTTTATGCTTTCGAAGCACAACTATCAAACACTAAGTTGGCAAAAGAAACTTGAGAAGCACACAAGATTTAATTTGCAAAAATATCCAGCACAATCATATGTGATCCACATTACCTGAATTTCCTAGTTTAGACCATGGTGCATTTAGCGAAGCAATGTTGTCCAAAAAGAGGAATCTGGATCTATCAAAGTATGGTGTGGGGTCTAGAAACCTATTCTTTGATTTTCTAATTTAACGTACTATAAGTTACATGTTTCCTTCCTGGCTTACCTTCAGGTGAGCTCAAAGGGAAAATTTGTGCAAGGAACCAATGACAACAAGATCCACAGGAATCGCCAATCCTCCAAGAAACATCAGGAAGCAGCTTCATCAGACGATGAGCAGGAGGATTCCAGGAGGGGACGTTCCAAGCTGGAACGATGGACAAGCCACAAGGAAAGAGACTTTGGTATCAATGCTAAATCATCTTCCTTGAACATGAAAGACAGCAATGTACACAAGGGCACCGGTACTTCATTAGCTAACAAAAATCAAGATGAAGCTTTAAAGATGGTCGAAGAAAATCAACAACCTGCAGCTAACTATAAAAATGGAGGTGCCCCTGAGATTAATAGCCTAGAAACAAAGCCTGTGGAGGATAAACATTTGGAGACAGTTGAGAAGTTGAAGAAGCGTAGTGAGCGCTTCAAGCTTCCAATGCCAAGTGAGAAAGAAGCTCCAGTAAGTAAAAAGGTGGAAGGTGATCCATTATCCTCAGTTCAAAGCGAAACCCCTCCAGATTCAGAGGTGAAGCCAGAGCGTCCAGCACGCAGGAGGAGATGGACAAGCAGTTAAATGAGGAATTCAAGGAACATCTTTGTTTGATGGCTTATTTCCTACTCATGGAGTATATGCCCTCCTTGGCTAATGTTTTACCAATGTGCTTGTCAACTTAAGGAAGCCTGTACTGCTGTTGTCTATTCTGGATCTGAGGTTTGTGTAGACCTCCCATAGTAGATTTGGGTATCTGTAACCATGTTCAGATTATCTATTTGGTTTTCTTATTTCTGTAATACATGTATATACCAGTAAGCCTAACATCATAGTGGCCCATTGTTGGGGTGCCAG</genome_strand>
        <mrna_strand>GCTTAGTTGTAAGTTGTAACCACTTGCAGCTTGTTGTGAGCTCAAATTGGAACTTATTTCAAAATTGACTTGGATTCTTTGATATTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGCTCAAAGGGAAAATTTGTGCAAGGAACCAATGACAACAAGATCCACAGGAATCGCCAATCCTCCAAGAAACATCAGGAAGCAGCTTCATCAGACGATGAGCAGGAGGATTCCAGGAGGGGACGTTCCAAGTTGGAACGATGGACAAGCCACAAGGAAAGAGACTTTGGTATCAATGCTAAATCATCTTCCTTGAACATGAAAGACAGCAATGTACACAAGGGCACCGGTACTTCATTAGCTAACAAAAATCAAGATGAAGCTTTAAAGATGGTCGAAGAAAATCAACAACCTGCAGCTAACTATAAAAATGGAGGTGCCCCTGAGATTAATAGCCTAGAAACAAAGCCTGTGGAGGATAAACATTTGGAGACAGTTGAGAAGTTGAAGAAGCGTAGTGAGCGCTTCAAGCTTCCAATGCCAAGTGAGAAAGAAGCTCCAGTAAGTAAAAAGGTGGAAGGTGATCCATTATCCTCAGTTCAAAGCGAAACCCCTCCAGATTCAGAGGTGAAGCCAGAGCGTCCAGCACGCAGGAGGAGATGGACAAGCAGTTAAATGAGGAATTCAAGGAACATCTTTGTTTGATGGCTTATTTCCTACTCATGGAGTATATGCCCTCCTTGGCTAATGTTTTACCAATGTGCTTGTCAACTTAAGGAAGCCTGTACTGCTGTTGTCTATTCTGGATCTGAGGTTTGTGTAGACCTCCCATAGTAGATTTGGGTATCTGTAACCATGTTCAGATTATCTATTTGGTTTTCTTATTTCTGTAATACATGTATATACCAGTAAGCCTAACATCATAGTGGCCCATTGTTGGGGTGCCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U562895" ref_strand="+" ref_description="SGN-U562895 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157343191|emb|CAO66680.1| (e_value=5e-40) unnamed; (*ATH) AT5G58040.1 (e_value=2e-13) | Symbol: None | fip1 motif-containing protein, contains Pfam profile PF05182: Fip1 motif | chr5:23505974-23511226 FORWARD | Aliases: K21L19.3, K21L19_3; ">
      <seq>gagaggtgaaattaagtagggaacacattgacaaggaagaaacattccattcccatggagaaactatggttcgcagaaagcgagagagagatgatgcctcagatcaccgaaagagagatgagctgatgagactacgagaagatgagcagctctatatcaggcacaaagaagatggagtgtttcagagggagaggaatgatagacagcgagaacgtgaggagtggtataggctcaaacagtcacatgaagagacactaccaaaaagggagagagaagaaataaggggcgggatgcgggctggacgtgttccggaagaaaaagcttgggctgctcaatctagagggaaagatgagtatagaaactctgatcagcactcgaaagatgtgaggcatgctgaccatattagaaggagggatcgtgttgaaaatgaaagtccatcgaggctgaggacacgtgaggatgaaagaagagcaaggcatgacagggtgaactcacgtgaagatcgtgctcctattgcttcagataactccagggttaatgagaaaagacataaagattatttgaagaagggtaaagaatttgagagtgatcacaactccccaatggctttgaacatgaacgaagatgaactgaatgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="-" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="80275" stop="79040"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79976" g_stop="79340" g_length="637"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="637" r_length="637" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="-" ref_id="SGN-U562895" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>637</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U562895" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79976" e_stop="79340"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAGGTGAAATTAAGTAGGGAACACATTGACAAGGAAGAAACATTCCATTCCCATGGAGAAACTATGGTTCGCAGAAAGCGAGAGAGAGATGATGCCTCAGATCACCGAAAGAGAGATGAGCTGATGAGACTACGAGAAGATGAGCAGCTCTATATCAGGCACAAAGAAGATGGAGTGTTTCAGAGGGAGAGGAATGATAGACAGCGAGAACGTGAGGAGTGGTATAGGCTCAAACAGTCACATGAAGAGACACTACCAAAAAGGGAGAGAGAAGAAATAAGGGGCGGGATGCGGGCTGGACGTGTTCCGGAAGAAAAAGCTTGGGCTGCTCAATCTAGAGGGAAAGATGAGTATAGAAACTCTGATCAGCACTCGAAAGATGTGAGGCATGCTGACCATATTAGAAGGAGGGATCGTGTTGAAAATGAAAGTCCATCGAGGCTGAGGACACGTGAGGATGAAAGAAGAGCAAGGCATGACAGGGTGAACTCACGTGAAGATCGTGCTCCTATTGCTTCAGATAACTCCAGGGTTAATGAGAAAAGACATAAAGATTATTTGAAGAAGGGTAAAGAATTTGAGAGTGATCACAACTCCCAGATGGCTTTGAACATGAACGAAGATGAACTGAATGG</genome_strand>
        <mrna_strand>GAGAGGTGAAATTAAGTAGGGAACACATTGACAAGGAAGAAACATTCCATTCCCATGGAGAAACTATGGTTCGCAGAAAGCGAGAGAGAGATGATGCCTCAGATCACCGAAAGAGAGATGAGCTGATGAGACTACGAGAAGATGAGCAGCTCTATATCAGGCACAAAGAAGATGGAGTGTTTCAGAGGGAGAGGAATGATAGACAGCGAGAACGTGAGGAGTGGTATAGGCTCAAACAGTCACATGAAGAGACACTACCAAAAAGGGAGAGAGAAGAAATAAGGGGCGGGATGCGGGCTGGACGTGTTCCGGAAGAAAAAGCTTGGGCTGCTCAATCTAGAGGGAAAGATGAGTATAGAAACTCTGATCAGCACTCGAAAGATGTGAGGCATGCTGACCATATTAGAAGGAGGGATCGTGTTGAAAATGAAAGTCCATCGAGGCTGAGGACACGTGAGGATGAAAGAAGAGCAAGGCATGACAGGGTGAACTCACGTGAAGATCGTGCTCCTATTGCTTCAGATAACTCCAGGGTTAATGAGAAAAGACATAAAGATTATTTGAAGAAGGGTAAAGAATTTGAGAGTGATCACAACTCCCCAATGGCTTTGAACATGAACGAAGATGAACTGAATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U601524" ref_strand="+" ref_description="SGN-U601524 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157343191|emb|CAO66680.1| (e_value=3e-13) unnamed; ">
      <seq>caggaaactgtgaggacagagcaggaatatgatccagaaatgcccccagaacttgcagcagcagctggtatgaaagacattccatcggaaaatttgaatggtaaaattgatggaactacaaatgacctaggaagaggatcaatgcgcatgagaccaccactaattgtgtgccaggatgatgaccaatacacagggaatgacaagaatgaagggcaattggacaatattccttcaacagaggattttagaggtgatgcaagaagaggacccctgcaggaacatgttcaagaatctgatggttttcagaatccttataagagccacaggcgagaggccaatgctaggagaacacagtttataaaccctataggtgatcatttaaccaaaggagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="-" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="84376" stop="82792"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84077" g_stop="84054" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="24" r_length="24" r_score="0.917"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="84053" i_stop="83943" i_length="111">
            <donor d_prob="0.809" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83942" g_stop="83805" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="162" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="83804" i_stop="83323" i_length="482">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="83322" g_stop="83092" g_length="231"/>
          <reference_exon_boundary r_type="cDNA" r_start="163" r_stop="393" r_length="231" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="-" ref_id="SGN-U601524" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>393</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U601524" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84077" e_stop="84054"/>
          <exon e_start="83942" e_stop="83805"/>
          <exon e_start="83322" e_stop="83092"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATGAAACTGTGAGGACAGAGCAGGTAATAGAATGCTTATGCAAATGAAGATACTATCTTCAGCAAGACGTGCATGTCTAATATGCTTATCATACTTCAAATTGTTCTTATTCTTATTTGGTATTCATTTTTTAGGAATATGATCCAGAAATGCCCCCAGAACTTGCAGCAGCAGCTGGTATGAAAGACATTCCATCGGAAAATTTGAATGGTAAAATTGATGGAACTACAAATGACCTAGGAAGAGGATCAATGCGCATGAGACCACCACTAGTATGTATTTTGAACTCAAGCCTTACGTTTAGGAACTTTATTGGTATTTTGTGGGCCTAACATTCTAACTTGACGAGTGGGTGAAGTATGCTTACTATTTCATCTTTATTTATAATATAAGTAATGATAACAAAGTTTCGGATATTAGTTTTCGTACTATTTACTCACTCATGTGATGTTCTACTAGCCCACTGGAAGACCGATACAAGTTGAAACTGGTTCTGGTGATCGCCTACCATCAATTGATAACCGACCACCACGACAGCGTGACTCGGATGCAATTATTGAAGTGAGTGATCTGACCCTGTCTTTTTCCAAATTCGAAAAGGAGGTGTCATTTAAAATAGAAAAGAAGCATAATTCATGCTGAGATCACTCGGCATTATTGTTTCCCTAATTTTTGCATGTCCTAAGAAGACTGCTGCTTCTTATTTTCTAGTTTTGTTTTATTTATCTTTGTTGACATTTTCTTGGGTGAACAGATTGTGTGCCAGGATGATGACCAATACACAGGGAATGACAAGAATGAAGGGCAATTGGACAATATTCCTTCAACAGAGGATTTTAGAGGTGATGCAAGAAGAGGACCCCTGCAGGAACATGTTCAAGAATCTGATGGTTTTCAGAATCCTTATAAGAGCCACAGGCGAGAGGCCAATGCTAGGAGAACACAGTTTATAAACCCTATAGGTGATCATTTAACCAAAGGAGAT</genome_strand>
        <mrna_strand>CAGGAAACTGTGAGGACAGAGCAG...............................................................................................................GAATATGATCCAGAAATGCCCCCAGAACTTGCAGCAGCAGCTGGTATGAAAGACATTCCATCGGAAAATTTGAATGGTAAAATTGATGGAACTACAAATGACCTAGGAAGAGGATCAATGCGCATGAGACCACCACTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTGTGCCAGGATGATGACCAATACACAGGGAATGACAAGAATGAAGGGCAATTGGACAATATTCCTTCAACAGAGGATTTTAGAGGTGATGCAAGAAGAGGACCCCTGCAGGAACATGTTCAAGAATCTGATGGTTTTCAGAATCCTTATAAGAGCCACAGGCGAGAGGCCAATGCTAGGAGAACACAGTTTATAAACCCTATAGGTGATCATTTAACCAAAGGAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U577770" ref_strand="+" ref_description="SGN-U577770 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|157343191|emb|CAO66680.1| (e_value=2e-29) unnamed; (*ATH) AT5G58040.1 (e_value=5e-12) | Symbol: None | fip1 motif-containing protein, contains Pfam profile PF05182: Fip1 motif | chr5:23505974-23511226 FORWARD | Aliases: K21L19.3, K21L19_3; ">
      <seq>ctaagaagccctcaaaaccctctctttattgcgtttttctccggaagtactcgcagttctctctctaatcgataatggaggacgacgatgaattcggagatctctacaccgatgtgctccgccccttaacggcgtcgtttcagtctcagcagcagccggtagcgcaagaagaagctgcgcccaaagccgccggggctacgagccggccgatcgatctgaacatcaacagcgatgatgaggagattttatacggagctccgaattcgaattcgaattcgaaaccgaattttgctgggccgagtgctattactggtcaggaaaaaaccctagcttctccgctagatgttaaatccgggtcgaggttacccgaatccaatctgtatttaaaacttggagctggaagaatggagggtttgggtggaattaatgaatcggattcgacagctagggttttggttaagagtgaggatgtgaaattagctaaaacggagtttcaagatttgaattttatggatgaagctaatattgatattgtagtggaagagacggatgataaagatgatattttgatggggaatcatcaaaatgtaggtgaagaccatgagaatctgaaggatgggactggaaatgcagggaatttcgtgattgaagcttctggtgccgagcagttgattcctgggctggcgattctgggtgtttcaggtggggcggggaatactggagaaggtacttttgaggatgattgggatagtgatagtgaggatgatttgcagattgtgttaaatgacaacactcatggaccaatgggcatggagagaatgggtattggtgaagaggacgatgaagatgaagatcctttggttattgttgctgataatgatggcccaagccatccaccaatgatggaggagcaagattggggtgaagaggggggtcctgccgctaatggagagagaaaggagatattagatgcactaaaagtgaatggagcacctggagtagcaggaaaggttgggtaccccaatcatgcatacaatcatccgtatcattcccagtataaggtcagtgatgttgtacctctgggggtttgtgttcttcccatattgtttgatcagaacatgcaatgtaagctgacttgtaattttcatatggttttgtggtcattggtgatgttaaggccgatggctctcattgtatgcacaagctgtataaagaattgtactgatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="-" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="89054" stop="87232"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88754" g_stop="87532" g_length="1223"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1229" r_length="1229" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="-" ref_id="SGN-U577770" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>1223</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U577770" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88754" e_stop="87532"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAAGAAGCCCTCAAAACCCTCTCTTTATTGCGTCTTTCTCCGGAAGTACTCGCAGTTCTCTCTCTAATCGATAATGGAGGACGACGATGAATTCGGAGATCTCTACACCGATGTACTCCGCCCCTTAACGGCGTCGTTTCAGTCTCAGCAGCAGCCGGTAGCGCAAGAAGAAGCTGCGCCCAAAGCCGCCGGGGCTACGAGCCGGCCGATCGATCTGAACATCAACAGCGATGATGAGGAGATTTTATACGGAGCT-C-----CGAATTCGAATTCGAAACCGAATTTTGCTGGGCCGAGTGCTATTACTGGTCAGGAAAAAACCCTAGCTTCTCCGCTAGATGTTAAATCCGGGTCGAGGTTACCCGAATCCAATCTGTATTTAAAACTTGGAGCTGGAAGAATGGAGGGTTTGGGTGGAATTAATGAATCGGATTCGACAGCTAGGGTTTTGGTTGAGAGTGAGGATGTGAAATTAGCTAAAACGGAGTTTCAAGATTTGAATTTTATGGATGAAGCTAATATTGATATTGTAGTGGAAGAGACGGATGATAAAGATGATATTTTGGTGGGGAATCATCAAAACGTAGGTGAAGACCATGAGAATCTGAAGGATGGGACTGGAAATGCAGGGAATTTCGTGATTGAAGCTTCTGGTGCCGAGCAGTTGATTCCTGGGCTGGCGATTCCGGGTGTTTCAGGTGGGGCGGGGAATACTGGAGAAGGTACTTTTGAGGATGATTGGGATAGTGATAGTGAGGATGATTTGCAGATTGTGTTAAATGACAACACTCATGGACCAATGGGCATGGAGAGAATGGGTATTGGTGAAGAGGACGATGAAGATGAAGATCCTTTGGTTATTGTTGCTGATAATGATGGCCCAAGCCATCCACCAATGATGGAGGAGCAAGATTGGGGTGAAGAGGGGGGTCCTGCCGCTAATGGAGAGAGAAAGGAGATATTAGATGCACTAAAAGTGAATGGAGCACCTGGAGTAGCAGGAAAGGTTGGGTACCCCAATCATGCATACAATCATCCGTATCATTCCCAGTATAAGGTCAGTGATGTTGTACCTCTGGGGGTTTGTGTTCTTCCCATATTGTTTGATCAGAACATGCAATGTAAGCTGACTTGTAATTTTCTTATGGTTTTGTGGTCATTGGTGATGTTAAGGCCGATGGCTCTCATTGTATGCACAAGCTGTATAAAGAATTGTACTGATGAT</genome_strand>
        <mrna_strand>CTAAGAAGCCCTCAAAACCCTCTCTTTATTGCGTTTTTCTCCGGAAGTACTCGCAGTTCTCTCTCTAATCGATAATGGAGGACGACGATGAATTCGGAGATCTCTACACCGATGTGCTCCGCCCCTTAACGGCGTCGTTTCAGTCTCAGCAGCAGCCGGTAGCGCAAGAAGAAGCTGCGCCCAAAGCCGCCGGGGCTACGAGCCGGCCGATCGATCTGAACATCAACAGCGATGATGAGGAGATTTTATACGGAGCTCCGAATTCGAATTCGAATTCGAAACCGAATTTTGCTGGGCCGAGTGCTATTACTGGTCAGGAAAAAACCCTAGCTTCTCCGCTAGATGTTAAATCCGGGTCGAGGTTACCCGAATCCAATCTGTATTTAAAACTTGGAGCTGGAAGAATGGAGGGTTTGGGTGGAATTAATGAATCGGATTCGACAGCTAGGGTTTTGGTTAAGAGTGAGGATGTGAAATTAGCTAAAACGGAGTTTCAAGATTTGAATTTTATGGATGAAGCTAATATTGATATTGTAGTGGAAGAGACGGATGATAAAGATGATATTTTGATGGGGAATCATCAAAATGTAGGTGAAGACCATGAGAATCTGAAGGATGGGACTGGAAATGCAGGGAATTTCGTGATTGAAGCTTCTGGTGCCGAGCAGTTGATTCCTGGGCTGGCGATTCTGGGTGTTTCAGGTGGGGCGGGGAATACTGGAGAAGGTACTTTTGAGGATGATTGGGATAGTGATAGTGAGGATGATTTGCAGATTGTGTTAAATGACAACACTCATGGACCAATGGGCATGGAGAGAATGGGTATTGGTGAAGAGGACGATGAAGATGAAGATCCTTTGGTTATTGTTGCTGATAATGATGGCCCAAGCCATCCACCAATGATGGAGGAGCAAGATTGGGGTGAAGAGGGGGGTCCTGCCGCTAATGGAGAGAGAAAGGAGATATTAGATGCACTAAAAGTGAATGGAGCACCTGGAGTAGCAGGAAAGGTTGGGTACCCCAATCATGCATACAATCATCCGTATCATTCCCAGTATAAGGTCAGTGATGTTGTACCTCTGGGGGTTTGTGTTCTTCCCATATTGTTTGATCAGAACATGCAATGTAAGCTGACTTGTAATTTTCATATGGTTTTGTGGTCATTGGTGATGTTAAGGCCGATGGCTCTCATTGTATGCACAAGCTGTATAAAGAATTGTACTGATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U584502" ref_strand="+" ref_description="SGN-U584502 Tomato 200607#2 [21 ESTs aligned] (*GB) gi|197260357|gb|ACH56716.1| (e_value=0) beta-glucosidase; (*ATH) AT3G55430.1 (e_value=3e-126)  Symbol: None | glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putative, similar to beta-1,3 glucanase GI:7414433 from (Pisum sativum); contains Pfam profile PF00332: Glycosyl hydrolases family 17 | chr3:20560576-20563192 REVERSE | Aliase... ; (*SWP) sp|P52409|E13B_WHEAT (e_value=2e-111) Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1; ">
      <seq>gctctattctctttccttttggtcaaaatagtccaaatttcaaattggactattcttcttcatatatataaataaatcatctatctctgcatcaaccatatcaaccatgataagcaaaacttcttttgtgctatttctcattgctattgctctttttcttcatgatgtaacttctataggtgttaattacgggactctcggaaacaacctccctccgccagctcaagtggctcagttcatcaaggataaaacggtcatagaccgtgtaaagattttcgatatcaaccctgacatcctccgtgcttttgcaaacacaggaatctcgctaacagtcacagtaccaaacggcgagatcccgaatctactggatctcgcctatgctcgacgatacgtcgagcagaatatcaaacctcattacccacagacaaagatggatgttattctagtgggtaatgaggttcttcactgggatacacctgaggtacagaacaagcttgttccagctatgaaagttttttaccaagctttgggtttatctgggttgaagggtataaaagtctcttcagctcattcgttgggtattctactccggtctaacccacccagtgcagcccggtttcgacccggttgggatgtgggtattctagctccgatgctacaatttcttcgtgaaacaaaaggtcctttcatggtaaatccctatccctacttcggatacaacaagaaacaagaggattttcttctatttagaaagaataaaggggtttacgatagattttcgaagaaatggtatacgaattcttttgatatgttgttggatgcggtgtatatgtcgatggtgagattgaagcattcagatgtggagattgttgctgctgagacagggtggccttcgcaaggagaagcgtatgaaccgcaatgtactgtggaaaatgcagcttcgtataatggtggattgatgaagaaatataattccgggatcggtacgccattgatgccgcacaggaagatcgagacctacattttttcattgttcaatgagaacaccaaacccggatccatcgctgagaggaacttcgggttgttccgacccgatttcactccggtttatgatgtcggagttttgaaaagcaaccaggctcacccaacaccttcattgcccccaccaaaaaccggtggcggaggcaataaaggtcaaccaaaaacaccagcagagaacaaaaaattctgcatgccaaaggttgaggcaactgatgcacaactacaatccaacattaactatgtgtgcagtcagggagttgactgcacaccaattcaagtgggtggttcctgctttaaacccaacactatccgatctcacgcagcctttgccatgaactcgtactatcaaaaggaaggtcgaaacaacttcaattgtgactttgctggtactggtgtagtcgccttctccgatccaagttatggaacatgcaaatttgaatcttgaatgtacgtgaagctaaggatgatagctagtattgacttgtaatatttatgaatgttatgtactttggtttcacatatataatctaattgtattggtttggtatgtaaacgttctttttatatactatgtcatttaatgtgcctcatttattaatttctcttttccatttgttttcaattttatcaagtcatcttaaatatagaaaaatacatatttaaaaataattactaattttagcgataatttttggttattactatttata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="-" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="93781" stop="89814"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93482" g_stop="92345" g_length="1138"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1138" r_length="1138" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92344" i_stop="90827" i_length="1518">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90826" g_stop="90508" g_length="319"/>
          <reference_exon_boundary r_type="cDNA" r_start="1139" r_stop="1457" r_length="319" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="90507" i_stop="90408" i_length="100">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="90407" g_stop="90114" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="1458" r_stop="1751" r_length="294" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="-" ref_id="SGN-U584502" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1751</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U584502" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93482" e_stop="92345"/>
          <exon e_start="90826" e_stop="90508"/>
          <exon e_start="90407" e_stop="90114"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCTATTCTCTTTCCTTTTGGTCAAAATAGTCCAAATTTCAAATTGGACTATTCTTCTTCATATATATAAATAAATCATCTATCTCTGCATCAACCATATCAACCATGATAAGCAAAACTTCTTTTGTGCTATTTCTCATTGCTATTGCTCTTTTTCTTCATGATGTAACTTCTATAGGTGTTAATTACGGGACTCTCGGAAACAACCTCCCTCCGCCAGCTCAAGTGGCTCAGTTCATCAAGGATAAAACGGTCATAGACCGTGTAAAGATTTTCGATATCAACCCTGACATCCTCCGTGCTTTTGCAAACACAGGAATCTCGCTAACAGTCACAGTACCAAACGGCGAGATCCCGAATCTACTGGATCTCGCCTATGCTCGACGATACGTCGAGCAGAATATCAAACCTCATTACCCACAGACAAAGATGGATGTTATTCTAGTGGGTAATGAGGTTCTTCACTGGGATACACCTGAGGTACAGAACAAGCTTGTTCCAGCTATGAAAGTTTTTTACCAAGCTTTGGGTTTATCTGGGTTGAAGGGTATAAAAGTCTCTTCAGCTCATTCGTTGGGTATTCTACTCCGTTCTAACCCACCCAGTGCAGCCCGGTTTCGACCCGGTTGGGATGTGGGTATTCTAGCTCCGATGCTACAATTTCTTCGTGAAACAAAAGGTCCTTTCATGGTAAATCCCTATCCCTACTTCGGATACAACAAGAAACAAGAGGATTTTCTTCTATTTAGAAAGAATAAAGGGGTTTACGATAGATTTTCGAAGAAATGGTATACGAATTCTTTTGATATGTTGTTGGATGCGGTGTATATGTCGATGGTGAGATTGAAGCATTCAGATGTGGAGATTGTTGCTGCTGAGACAGGGTGGCCTTCGCAAGGAGAAGCGTATGAACCGCAATGTACTGTGGAAAATGCAGCTTCGTATAATGGTGGATTGATGAAGAAATATAATTCCGGGATCGGTACGCCATTGATGCCGCACAGGAAGATCGAGACCTACATTTTTTCATTGTTCAATGAGAACACCAAACCCGGATCCATCGCTGAGAGGAACTTCGGGTTGTTCCGACCCGATTTCACTCCGGTTTATGATGTCGGAGTTTTGAAAAGCAACCAGGTAATTTCGAAAAATTAATACTTCCTACGCACTTTTACATTTTGAGATTTAAAACAAATCTATCATTTTAAAAAAATTGAAAATTTTATACGCAATTGTTCAATCAAAGTTAAATTATTTGATTTTTATAAAATAAAAATGTCACGTAAAATGGAATAGAGATAACAAAACAAAGTGGCTTAAACACATCTAAATTAATTGAGTACTATAATAGTATTGTTTTGTTATAAGCATAAGTAATTAAATGGAAATCTAATTAACTAGTAGATCAACTTTATTTAATTGAATCCATGAGGGGTATTTAAGTCATTTTGCTAATGTAATTATGATTATAATGGTACTGCTATAATTACAACAAGCTTTTTGTAAATAATTTCATTTTGTCTTTTGGTTTGAAGAATCTTTTTTTTCCAGTTGAGTACAGCTAGTTGTATTGCATTTTTTTCCACTCTAGAACCTAGATACATGGGAATATGTTTTCCATGTGGAGTCGTTTTGGTACTCGAATCCAATAATTTTTTTAATTTTGATTCAAGTGTTTTAATTTGACGATAGTATTAAACGTACACACTTTAAAATTATTATCATCTAATTAATAAACGTGGCATGGTCGAAAAGAAAAAAGTTGACACCTGTTGTAGTGGCCACCACATGTTATTACGTAATAGATTAATAAAAATAATTTCTTCATTGGATTCTCTTGCATTAAATAATTGTCATTTTTTCAGTGAACCAAAAAAAAAGTTTAACATGTCCAACGGCTACTTAATGAAACATGTGATGTAGTATTTACAAAATGAAAAAAGAAATAGATTTCATAAGCATCATCTTTTTTCTTTTTTTTAAAAAAAAAAGATTTCATAAGCATATCTTTAAATTTGAATCTTGTCTTCTTTGATTTTTGTTTTTTTACTTTATTCTCTCTTCTTTTTAATGTATTGCTTTCTCCTTTATGGTTCCACTAATTTAAAAATAGAAGTCGGTATTCGTAAGTGACGGATTTAGAATTTTCATAATGAGTTGTTAATGGTTATGGCTTAAACACATGACACGACCTTAGGAATTTTCGTAACCCTTTAATCGCTAGGTTGCATAGAGAATATATGATGGGTTTGGTTATTATCCATTATTTGATTCATTTTAGTTCAAGTAAACTTCATGTGATAATTATGTTAGCATTAGCGATCGAGCTAGAAATTCATATAAAAATATTCATTATTATTGAAATTTGAACTTGTAACTTAAGCGGCGGAGAGTTTGACCGTAGGAATAAATTGATTAACAGTTTTCTTGAGGAAGAGATCTAGAATGAACACTTTTTTCATTCGCTATACGCTAATTGAAGCTACTATTGATCTCTTTACTATCTAATATTTTTCACCTTTCTTATAAGAGATGCACCACCTTGCCTCTTACTAGAGTGTGTCACTACTTATGACCGATTAATCGATTTGACTTTGTTTAACTCATTCATTTGTCACCTCTAGTCGATAAGTTTTATAATTTTGATACTTACAGGCTCACCCAACACCTTCATTGCCCCCACCAAAAACCGGTGGCGGAGGCAATAAAGGTCAACCAAAAACACCAGCAGAGAACAAAAAATTCTGCATGCCAAAGGTTGAGGCAACTGATGCACAACTACAATCCAACATTAACTATGTGTGCAGTCAGGGAGTTGACTGCACACCAATTCAAGTGGGTGGTTCCTGCTTTAAACCCAACACTATCCGATCTCACGCAGCCTTTGCCATGAACTCGTACTATCAAAAGGAAGGTCGAAACAACTTCAATTGTGACTTTGCTGGTACTGGTGTAGTCGCCTTCTCCGATCCAAGTAAGGTTTTTTAAAACATGAAATTATATGATCTTTTTATGAAATTTATAGTATGATAATCTTTCTAATGATGTTATGTGTGTTTGTGTGTGTTTTCTAGGTTATGGAACATGCAAATTTGAATCTTGAATGTACGTGAAGCTAAGGATGATAGCTAGTATTGACTTGTAATATTTATGAATGTTATGTACTTTGGTTTCACATATATAATCTAATTGTATTGGTTTGGTATGTAAACGTTCTTTTTATATACTATGTCATTTAATGTGCCTCATTTATTAATTTCTCTTTTCCATTTGTTTTCAATTTTATCAAGTCATCTTAAATATAGAAAAATACATATTTAAAAATAATTACTAATTTTAGCGATATTTTTTGTTTATTACTATTTATA</genome_strand>
        <mrna_strand>GCTCTATTCTCTTTCCTTTTGGTCAAAATAGTCCAAATTTCAAATTGGACTATTCTTCTTCATATATATAAATAAATCATCTATCTCTGCATCAACCATATCAACCATGATAAGCAAAACTTCTTTTGTGCTATTTCTCATTGCTATTGCTCTTTTTCTTCATGATGTAACTTCTATAGGTGTTAATTACGGGACTCTCGGAAACAACCTCCCTCCGCCAGCTCAAGTGGCTCAGTTCATCAAGGATAAAACGGTCATAGACCGTGTAAAGATTTTCGATATCAACCCTGACATCCTCCGTGCTTTTGCAAACACAGGAATCTCGCTAACAGTCACAGTACCAAACGGCGAGATCCCGAATCTACTGGATCTCGCCTATGCTCGACGATACGTCGAGCAGAATATCAAACCTCATTACCCACAGACAAAGATGGATGTTATTCTAGTGGGTAATGAGGTTCTTCACTGGGATACACCTGAGGTACAGAACAAGCTTGTTCCAGCTATGAAAGTTTTTTACCAAGCTTTGGGTTTATCTGGGTTGAAGGGTATAAAAGTCTCTTCAGCTCATTCGTTGGGTATTCTACTCCGGTCTAACCCACCCAGTGCAGCCCGGTTTCGACCCGGTTGGGATGTGGGTATTCTAGCTCCGATGCTACAATTTCTTCGTGAAACAAAAGGTCCTTTCATGGTAAATCCCTATCCCTACTTCGGATACAACAAGAAACAAGAGGATTTTCTTCTATTTAGAAAGAATAAAGGGGTTTACGATAGATTTTCGAAGAAATGGTATACGAATTCTTTTGATATGTTGTTGGATGCGGTGTATATGTCGATGGTGAGATTGAAGCATTCAGATGTGGAGATTGTTGCTGCTGAGACAGGGTGGCCTTCGCAAGGAGAAGCGTATGAACCGCAATGTACTGTGGAAAATGCAGCTTCGTATAATGGTGGATTGATGAAGAAATATAATTCCGGGATCGGTACGCCATTGATGCCGCACAGGAAGATCGAGACCTACATTTTTTCATTGTTCAATGAGAACACCAAACCCGGATCCATCGCTGAGAGGAACTTCGGGTTGTTCCGACCCGATTTCACTCCGGTTTATGATGTCGGAGTTTTGAAAAGCAACCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCACCCAACACCTTCATTGCCCCCACCAAAAACCGGTGGCGGAGGCAATAAAGGTCAACCAAAAACACCAGCAGAGAACAAAAAATTCTGCATGCCAAAGGTTGAGGCAACTGATGCACAACTACAATCCAACATTAACTATGTGTGCAGTCAGGGAGTTGACTGCACACCAATTCAAGTGGGTGGTTCCTGCTTTAAACCCAACACTATCCGATCTCACGCAGCCTTTGCCATGAACTCGTACTATCAAAAGGAAGGTCGAAACAACTTCAATTGTGACTTTGCTGGTACTGGTGTAGTCGCCTTCTCCGATCCAA....................................................................................................GTTATGGAACATGCAAATTTGAATCTTGAATGTACGTGAAGCTAAGGATGATAGCTAGTATTGACTTGTAATATTTATGAATGTTATGTACTTTGGTTTCACATATATAATCTAATTGTATTGGTTTGGTATGTAAACGTTCTTTTTATATACTATGTCATTTAATGTGCCTCATTTATTAATTTCTCTTTTCCATTTGTTTTCAATTTTATCAAGTCATCTTAAATATAGAAAAATACATATTTAAAAATAATTACTAATTTTAGCGATAATTTTTGGTTATTACTATTTATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U584503" ref_strand="+" ref_description="SGN-U584503 Tomato 200607#2 [10 ESTs aligned] (*GB) gi|197260357|gb|ACH56716.1| (e_value=1e-138) beta-glucosidase; (*ATH) AT3G55430.1 (e_value=1e-70)  Symbol: None | glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putative, similar to beta-1,3 glucanase GI:7414433 from (Pisum sativum); contains Pfam profile PF00332: Glycosyl hydrolases family 17 | chr3:20560576-20563192 REVERSE | Aliase... ; (*SWP) sp|P52409|E13B_WHEAT (e_value=1e-54) Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1; ">
      <seq>aagaaatctagaggtctctattccctttccttttggtcaaaatagtccaaatttcaaattggactattcttcttcgtatatataaataaatcatctatctctgtatcaaccatatcaaccatgatgaacctatcaagcaaaacttcttttgtgctatttttctttgctattgctctttttcttcgtgatgtaacttctataggtgttaattacgggactctcggaaacaacctccctccgccagctcaagtagctcagttcatcaaggataaaacggtcatagaccgtgtaaagattttcgatatcaaccctgacatcctccgtgcttttgcaaacacgggaatctcgctaacaatcacagtaccaaatggcgagatcccgaatctactggatctcgcctatgctcgacgatacgtcgagcagaatatcaaacctcattacccacagacaaagatggatgttattctagtgggtaatgaggttcttcactgggatacacctgaggtacagaacaagcttgttccagctatgaaggttttttaccaagctttgggtttatctgggttgaagggtataaaagtctcttcagctcattcgttgggtattctactccgttctaacccacccagtgcagcccggtttcgacccggttgggatgtgggtattctagctccgatgctacaatttcttcgtgaaacaaaaggtccttttatggtaaatccctatccctacttcggatacaacaagaaacaagaggattttcttctatttagaaagaataaaggggtttacgatagattttcgaagaaatggtatacgaattcttttgatatgttgttggatgcggtgtatatgtcgatggtgagattgaagcattcagatgtggagattgttgctgctgagacagggtggcatccgaaagcacgaagcctatgaaatgaactcgtactatcaaaaggaaggtcgaaacaacttcaattgtgactttgctggtactggtgtagtcgccttctccgatccaagttatggaacatgcaaatttgaatcttgaatgtacgtgaaagctgaagatgatagctagtaatatttatgaatgttatgtactttgggtcacatatataatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="-" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="93796" stop="90015"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93496" g_stop="92593" g_length="904"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="913" r_length="913" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92592" i_stop="90617" i_length="1976">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90616" g_stop="90508" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="914" r_stop="1022" r_length="109" r_score="0.936"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="90507" i_stop="90408" i_length="100">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="90407" g_stop="90296" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="1023" r_stop="1124" r_length="102" r_score="0.866"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="-" ref_id="SGN-U584503" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>1125</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U584503" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93496" e_stop="92593"/>
          <exon e_start="90616" e_stop="90508"/>
          <exon e_start="90407" e_stop="90296"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAAATCTAGAGGTCTCTATTCTCTTTCCTTTTGGTCAAAATAGTCCAAATTTCAAATTGGACTATTCTTCTTCATATATATAAATAAATCATCTATCTCTGCATCAACCATATCAACCA---TGA-----T-AAGCAAAACTTCTTTTGTGCTATTTCTCATTGCTATTGCTCTTTTTCTTCATGATGTAACTTCTATAGGTGTTAATTACGGGACTCTCGGAAACAACCTCCCTCCGCCAGCTCAAGTGGCTCAGTTCATCAAGGATAAAACGGTCATAGACCGTGTAAAGATTTTCGATATCAACCCTGACATCCTCCGTGCTTTTGCAAACACAGGAATCTCGCTAACAGTCACAGTACCAAACGGCGAGATCCCGAATCTACTGGATCTCGCCTATGCTCGACGATACGTCGAGCAGAATATCAAACCTCATTACCCACAGACAAAGATGGATGTTATTCTAGTGGGTAATGAGGTTCTTCACTGGGATACACCTGAGGTACAGAACAAGCTTGTTCCAGCTATGAAAGTTTTTTACCAAGCTTTGGGTTTATCTGGGTTGAAGGGTATAAAAGTCTCTTCAGCTCATTCGTTGGGTATTCTACTCCGTTCTAACCCACCCAGTGCAGCCCGGTTTCGACCCGGTTGGGATGTGGGTATTCTAGCTCCGATGCTACAATTTCTTCGTGAAACAAAAGGTCCTTTCATGGTAAATCCCTATCCCTACTTCGGATACAACAAGAAACAAGAGGATTTTCTTCTATTTAGAAAGAATAAAGGGGTTTACGATAGATTTTCGAAGAAATGGTATACGAATTCTTTTGATATGTTGTTGGATGCGGTGTATATGTCGATGGTGAGATTGAAGCATTCAGATGTGGAGATTGTTGCTGCTGAGACAGGGTGGCCTTCGCAAGGAGAAGCGTATGAACCGCAATGTACTGTGGAAAATGCAGCTTCGTATAATGGTGGATTGATGAAGAAATATAATTCCGGGATCGGTACGCCATTGATGCCGCACAGGAAGATCGAGACCTACATTTTTTCATTGTTCAATGAGAACACCAAACCCGGATCCATCGCTGAGAGGAACTTCGGGTTGTTCCGACCCGATTTCACTCCGGTTTATGATGTCGGAGTTTTGAAAAGCAACCAGGTAATTTCGAAAAATTAATACTTCCTACGCACTTTTACATTTTGAGATTTAAAACAAATCTATCATTTTAAAAAAATTGAAAATTTTATACGCAATTGTTCAATCAAAGTTAAATTATTTGATTTTTATAAAATAAAAATGTCACGTAAAATGGAATAGAGATAACAAAACAAAGTGGCTTAAACACATCTAAATTAATTGAGTACTATAATAGTATTGTTTTGTTATAAGCATAAGTAATTAAATGGAAATCTAATTAACTAGTAGATCAACTTTATTTAATTGAATCCATGAGGGGTATTTAAGTCATTTTGCTAATGTAATTATGATTATAATGGTACTGCTATAATTACAACAAGCTTTTTGTAAATAATTTCATTTTGTCTTTTGGTTTGAAGAATCTTTTTTTTCCAGTTGAGTACAGCTAGTTGTATTGCATTTTTTTCCACTCTAGAACCTAGATACATGGGAATATGTTTTCCATGTGGAGTCGTTTTGGTACTCGAATCCAATAATTTTTTTAATTTTGATTCAAGTGTTTTAATTTGACGATAGTATTAAACGTACACACTTTAAAATTATTATCATCTAATTAATAAACGTGGCATGGTCGAAAAGAAAAAAGTTGACACCTGTTGTAGTGGCCACCACATGTTATTACGTAATAGATTAATAAAAATAATTTCTTCATTGGATTCTCTTGCATTAAATAATTGTCATTTTTTCAGTGAACCAAAAAAAAAGTTTAACATGTCCAACGGCTACTTAATGAAACATGTGATGTAGTATTTACAAAATGAAAAAAGAAATAGATTTCATAAGCATCATCTTTTTTCTTTTTTTTAAAAAAAAAAGATTTCATAAGCATATCTTTAAATTTGAATCTTGTCTTCTTTGATTTTTGTTTTTTTACTTTATTCTCTCTTCTTTTTAATGTATTGCTTTCTCCTTTATGGTTCCACTAATTTAAAAATAGAAGTCGGTATTCGTAAGTGACGGATTTAGAATTTTCATAATGAGTTGTTAATGGTTATGGCTTAAACACATGACACGACCTTAGGAATTTTCGTAACCCTTTAATCGCTAGGTTGCATAGAGAATATATGATGGGTTTGGTTATTATCCATTATTTGATTCATTTTAGTTCAAGTAAACTTCATGTGATAATTATGTTAGCATTAGCGATCGAGCTAGAAATTCATATAAAAATATTCATTATTATTGAAATTTGAACTTGTAACTTAAGCGGCGGAGAGTTTGACCGTAGGAATAAATTGATTAACAGTTTTCTTGAGGAAGAGATCTAGAATGAACACTTTTTTCATTCGCTATACGCTAATTGAAGCTACTATTGATCTCTTTACTATCTAATATTTTTCACCTTTCTTATAAGAGATGCACCACCTTGCCTCTTACTAGAGTGTGTCACTACTTATGACCGATTAATCGATTTGACTTTGTTTAACTCATTCATTTGTCACCTCTAGTCGATAAGTTTTATAATTTTGATACTTACAGGCTCACCCAACACCTTCATTGCCCCCACCAAAAACCGGTGGCGGAGGCAATAAAGGTCAACCAAAAACACCAGCAGAGAACAAAAAATTCTGCATGCCAAAGGTTGAGGCAACTGATGCACAACTACAATCCAACATTAACTATGTGTGCAGTCAGGGAGTTGACTGCACACCAATTCAAGTGGGTGGTTCCTGCTTTAAACCCAACACTATCCGATCTCACGCAGCCTTTGCCATGAACTCGTACTATCAAAAGGAAGGTCGAAACAACTTCAATTGTGACTTTGCTGGTACTGGTGTAGTCGCCTTCTCCGATCCAAGTAAGGTTTTTTAAAACATGAAATTATATGATCTTTTTATGAAATTTATAGTATGATAATCTTTCTAATGATGTTATGTGTGTTTGTGTGTGTTTTCTAGGTTATGGAACATGCAAATTTGAATCTTGAATGTACGTGAAGCTAAGGATGATAGCTAGTATTGACTTGTAATATTTATGAATGTTATGTACTTTGGTTTCACATATATAATC</genome_strand>
        <mrna_strand>AAGAAATCTAGAGGTCTCTATTCCCTTTCCTTTTGGTCAAAATAGTCCAAATTTCAAATTGGACTATTCTTCTTCGTATATATAAATAAATCATCTATCTCTGTATCAACCATATCAACCATGATGAACCTATCAAGCAAAACTTCTTTTGTGCTATTTTTCTTTGCTATTGCTCTTTTTCTTCGTGATGTAACTTCTATAGGTGTTAATTACGGGACTCTCGGAAACAACCTCCCTCCGCCAGCTCAAGTAGCTCAGTTCATCAAGGATAAAACGGTCATAGACCGTGTAAAGATTTTCGATATCAACCCTGACATCCTCCGTGCTTTTGCAAACACGGGAATCTCGCTAACAATCACAGTACCAAATGGCGAGATCCCGAATCTACTGGATCTCGCCTATGCTCGACGATACGTCGAGCAGAATATCAAACCTCATTACCCACAGACAAAGATGGATGTTATTCTAGTGGGTAATGAGGTTCTTCACTGGGATACACCTGAGGTACAGAACAAGCTTGTTCCAGCTATGAAGGTTTTTTACCAAGCTTTGGGTTTATCTGGGTTGAAGGGTATAAAAGTCTCTTCAGCTCATTCGTTGGGTATTCTACTCCGTTCTAACCCACCCAGTGCAGCCCGGTTTCGACCCGGTTGGGATGTGGGTATTCTAGCTCCGATGCTACAATTTCTTCGTGAAACAAAAGGTCCTTTTATGGTAAATCCCTATCCCTACTTCGGATACAACAAGAAACAAGAGGATTTTCTTCTATTTAGAAAGAATAAAGGGGTTTACGATAGATTTTCGAAGAAATGGTATACGAATTCTTTTGATATGTTGTTGGATGCGGTGTATATGTCGATGGTGAGATTGAAGCATTCAGATGTGGAGATTGTTGCTGCTGAGACAGGGTGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGAAAGCACGAAGCCTATGAAATGAACTCGTACTATCAAAAGGAAGGTCGAAACAACTTCAATTGTGACTTTGCTGGTACTGGTGTAGTCGCCTTCTCCGATCCAA....................................................................................................GTTATGGAACATGCAAATTTGAATCTTGAATGTACGTG-A---AA-GCTGA-AGAT-G-ATAG-CTAGTAATATTTATGAATGTTATGTACTTTGG-GTCACATATATAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U568578" ref_strand="+" ref_description="SGN-U568578 Tomato 200607#2 [20 ESTs aligned] (*GB) gi|157343195|emb|CAO66684.1| (e_value=2e-93) unnamed; (*ATH) AT5G58020.1 (e_value=1e-92) | Symbol: None | expressed protein, contains PF04641: Protein of unknown function, DUF602 | chr5:23502726-23504044 FORWARD | Aliases: F2C19.3, F2C19_3; (*SWP) sp|A5GFW7|CT043_PIG (e_value=3e-28) UPF0549 protein C20orf43 homolog OS=Sus scrofa; ">
      <seq>gcaaatcggccgaattgaatctttttcccctttcgagaaccagagctcttcgattcctcttcaattcaggtatttttttaaaatttctcttcgatttcaattcataaaccctaataatggaaccccaaatgcgcaatttcccagtttttatacaatcgccagagcttcagatccctactcatgtcctaaatattgaaaaccctaatcctaatttcactttgcaagacctcaaatcatgtttgcttgaaaaaacccagcaatcattagctgcaattaaggattctgtctattttacttttgatggtcgaccgattaaggattcaactctattatatggttctgggattagcccgttttccactttggtactacgtttccgccttcgtggtggtggtggtgatggaggtgccacgggagcggagtcccgagactgttatcttaagatgtatgctgttaagaagccggataaaattgatccaaatgagattaggttgtctagatggttgaattgtgcgttgtcgaacgagtcattaaagcatcctgttgttattgataagcttgggaatttgttcaataaggagacgttagttgaggctttattgaagaaaaggctgcctaagcagtttgggtatataaagggattgaaagatatgattccggttgagctatcggtgattccgggcaaagaggatagagggcttggtgatggtgaagggactgggtttcagtgcccggtaacagggttggagttcaatgggaagtacaagttctttgctttgaggggttgtgggcatgttttgagtgcaaaagctttgaaggaggtgaaatcctcggcttgtttggtttgccacaaggaggttgtggagagtgacaaaattgtgatcaacgggagtgaagaagaggttgcggctttgagggagagaatggaggaagaaagggtgaaattgaaggatagtaagaaggtgaagaaggggaggaatgtggatgtagctgtgaatggtgaagaggtcattggggcatcacgcttgagcggaatgaaacatgggattgaggataagctggtaggcaaggatgcaaggaaagtggaagggaatggtaaaattggcattaaaagtaagattgaagttaaggatgtgaagaatagttcgagcaacgggtcagggaagaggtttaaggctgttgatgtagctccagctcatgctacaaaggaagtctatgcctccattttcacttcatcaagaaagtctgacttcaaggagacttattcttgcagatctttgccccttggaagaaactgatagctgtttttgtcgaggtgatctgctagtgtcttggactggttttattgtcttaaaatgttgtttcacgatagatagttacatgctagaccactgagtcgtagatgttgcctcttgccatttgattcagtcggtactttatatgtataacatacattgttattgtacatttgatattgcttttcaaagtctgcttgaaacactatagcagcttttgttcactcgcttatgactgttttctgctgatttctttaaatgatttgtacttctagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="-" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="96941" stop="94780"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96653" g_stop="95080" g_length="1574"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1571" r_length="1571" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="-" ref_id="SGN-U568578" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>1574</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U568578" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96653" e_stop="95080"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAATACGATAAAATTACAATCTTTTTCCCCTTTCGAGAACCAGAGCTCTTCGATTTCTCTTCAATTCAGGTATTCTTTTTTAAATTTCTCTTCGATTTCAATTCATAAACCCTAATAATGGAACCCCAAATGCGCAATTTCCCAGTTTTTATACAATCGCCAGAGCTTCAGATCCCTACTCATGTCCTAAATATTGAAAACCCTAATCCTAATTTCACTTTGCAAGACCTCAAATCATGTTTGCTTGAAAAAACCCAGAAATCATTGGCTGCAATTAAGGATTCTGTCTATCTTACTTTTGATGGTCGACCCATTAAGGATTCAACTCTATTATATGGTTCTGGGATTAGCCCGTTTTCCACTTTGGTACTACGTTTCCGCCTTCGTGGTGGTGGTGGTGATGGAGGTGCCACGGGAGCGGAGTCCCGAGACTGTTATCTCAAGATGTATGCTGTTAAGAAACCGGATAAAATTGATCCAAATGAGATTAGGTTGTCTAGATGGTTGAATTGTGCGTTGTCGAACGAGTCATTAAAGCATCCTGTTGTTATTGATAAGCTTGGGAATTTGTTCAATAAGGAGACGTTAGTTGAGGCTTTATTGAAGAAAAGGCTGCCTAAGCAGTTTGGGTATATAAAGGGATTGAAAGATATGATTCCGGTTGAGCTATCGGTGATTCCGGGCAAAGAGGATAGAGGGCTTGGTGATGGTGAAGGGACTGGGTTTCAGTGCCCGGTAACAGGGTTGGAGTTCAATGGGAAGTACAAGTTCTTTGCTTTGAGGGGTTGTGGGCATGTTTTGAGTGCAAAAGCTTTGAAGGAGGTGAAATCCTCGGCTTGTTTGGTTTGCCACAAGGAGGTTGTGGAGAGTGACAAAATTGTGATCAACGGGAGTGAAGAAGAGGTTGCGGCTTTGAGGGAGAGAATGGAGGAAGAAAGGGTGAAATTGAAGGATAGTAAGAAGGTGAAGAAGGGGAGGAATGTGGATGTAGCTGTGAATGGTGAAGAGGTCATTGGGGCATCACGCTTGAGCGGAATGAAACATGGGATTGAGGATAAGCTGGTAGGCAAGGATGCAAGGAAAGTGGAAGGGAATGGTAAAATTGGCATTAAAAGTAAGATTGAAGTTAAGGATGTGAAGAATAGTTCGAGCAACGGGTCTGGGAAGAGGTTTAAGGCTGTTGATGTAGCTCCAGCTCATGCTACAAAGGAAGTCTATGCCTCCATTTTCACTTCATCAAGAAAGTCTGACTTCAAGGAGACTTATTCTTGCAGATCTTTGCCCCTTGGAAGAAACTGATAGCTGTTTTTGTCGAGGTGATCTGCTAGTGTCTTGGACTGGTTTTATTGTCTTAAAATGTTGTTTCACGATAGATAGTTACATGCTAGACCACTGAGTCGTAGATGTTGCCTCTTGCCATTTGATTCAGTCGGTACTTTATATGTATAACATACATTGTTATTGTACATTTGATGTTGCTTTTCAGAGTCTGCTTGAAACACTATAGCAGCTTTTGTTCACTCGCTTATGACCGTTTTCTGCTGATTTCTTTTAAATGATTTGTACTTCTAGT</genome_strand>
        <mrna_strand>GCAAATCGGCCGAATT-GAATCTTTTTCCCCTTTCGAGAACCAGAGCTCTTCGATTCCTCTTCAATTCAGGTATT-TTTTTAAAATTTCTCTTCGATTTCAATTCATAAACCCTAATAATGGAACCCCAAATGCGCAATTTCCCAGTTTTTATACAATCGCCAGAGCTTCAGATCCCTACTCATGTCCTAAATATTGAAAACCCTAATCCTAATTTCACTTTGCAAGACCTCAAATCATGTTTGCTTGAAAAAACCCAGCAATCATTAGCTGCAATTAAGGATTCTGTCTATTTTACTTTTGATGGTCGACCGATTAAGGATTCAACTCTATTATATGGTTCTGGGATTAGCCCGTTTTCCACTTTGGTACTACGTTTCCGCCTTCGTGGTGGTGGTGGTGATGGAGGTGCCACGGGAGCGGAGTCCCGAGACTGTTATCTTAAGATGTATGCTGTTAAGAAGCCGGATAAAATTGATCCAAATGAGATTAGGTTGTCTAGATGGTTGAATTGTGCGTTGTCGAACGAGTCATTAAAGCATCCTGTTGTTATTGATAAGCTTGGGAATTTGTTCAATAAGGAGACGTTAGTTGAGGCTTTATTGAAGAAAAGGCTGCCTAAGCAGTTTGGGTATATAAAGGGATTGAAAGATATGATTCCGGTTGAGCTATCGGTGATTCCGGGCAAAGAGGATAGAGGGCTTGGTGATGGTGAAGGGACTGGGTTTCAGTGCCCGGTAACAGGGTTGGAGTTCAATGGGAAGTACAAGTTCTTTGCTTTGAGGGGTTGTGGGCATGTTTTGAGTGCAAAAGCTTTGAAGGAGGTGAAATCCTCGGCTTGTTTGGTTTGCCACAAGGAGGTTGTGGAGAGTGACAAAATTGTGATCAACGGGAGTGAAGAAGAGGTTGCGGCTTTGAGGGAGAGAATGGAGGAAGAAAGGGTGAAATTGAAGGATAGTAAGAAGGTGAAGAAGGGGAGGAATGTGGATGTAGCTGTGAATGGTGAAGAGGTCATTGGGGCATCACGCTTGAGCGGAATGAAACATGGGATTGAGGATAAGCTGGTAGGCAAGGATGCAAGGAAAGTGGAAGGGAATGGTAAAATTGGCATTAAAAGTAAGATTGAAGTTAAGGATGTGAAGAATAGTTCGAGCAACGGGTCAGGGAAGAGGTTTAAGGCTGTTGATGTAGCTCCAGCTCATGCTACAAAGGAAGTCTATGCCTCCATTTTCACTTCATCAAGAAAGTCTGACTTCAAGGAGACTTATTCTTGCAGATCTTTGCCCCTTGGAAGAAACTGATAGCTGTTTTTGTCGAGGTGATCTGCTAGTGTCTTGGACTGGTTTTATTGTCTTAAAATGTTGTTTCACGATAGATAGTTACATGCTAGACCACTGAGTCGTAGATGTTGCCTCTTGCCATTTGATTCAGTCGGTACTTTATATGTATAACATACATTGTTATTGTACATTTGATATTGCTTTTCAAAGTCTGCTTGAAACACTATAGCAGCTTTTGTTCACTCGCTTATGACTGTTTTCTGCTGATTTC-TTTAAATGATTTGTACTTCTAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U596160" ref_strand="+" ref_description="SGN-U596160 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>tccctacccatatcctaaatattgaaaaccctaatcctaatttcactgtgctagacaccatactatgtttccttgaaaaaacccagaaatcattgtctgcaattaaagattctgtctatcttacttttgatggtcgacccattaaggattcaactctattatacagttctgaaattagcccatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="-" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="96780" stop="95997"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96480" g_stop="96297" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="184" r_length="184" r_score="0.908"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="-" ref_id="SGN-U596160" ref_strand="+">
        <total_alignment_score>0.908</total_alignment_score>
        <cumulative_length_of_scored_exons>184</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U596160" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96480" e_stop="96297"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCTACTCATGTCCTAAATATTGAAAACCCTAATCCTAATTTCACTTTGCAAGACCTCAAATCATGTTTGCTTGAAAAAACCCAGAAATCATTGGCTGCAATTAAGGATTCTGTCTATCTTACTTTTGATGGTCGACCCATTAAGGATTCAACTCTATTATATGGTTCTGGGATTAGCCCGTT</genome_strand>
        <mrna_strand>TCCCTACCCATATCCTAAATATTGAAAACCCTAATCCTAATTTCACTGTGCTAGACACCATACTATGTTTCCTTGAAAAAACCCAGAAATCATTGTCTGCAATTAAAGATTCTGTCTATCTTACTTTTGATGGTCGACCCATTAAGGATTCAACTCTATTATACAGTTCTGAAATTAGCCCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U576361" ref_strand="+" ref_description="SGN-U576361 Tomato 200607#2 [7 ESTs aligned] (*GB) gi|157348059|emb|CAO22646.1| (e_value=5e-56) unnamed; (*ATH) AT1G06780.1 (e_value=1e-48) | Symbol: None | glycosyl transferase family 8 protein, contains Pfam profile: PF01501 glycosyl transferase family 8 | chr1:2083423-2086961 FORWARD | Aliases: F4H5.13, F4H5_13; (*SWP) sp|Q9LSG3|QUA1_ARATH (e_value=2e-35) Glycosyltransferase QUASIMODO1 OS=Arabidopsis thaliana GN=QUA1; ">
      <seq>gtcattccggcgaatggatatgctcatcaatttcactgaccccatggtggcaacgaaatttgacgcgaaatcatgcacatgggcatttgggatgaatttgtttgatctgcaggagtggaggaaacgaaacttgactgggctctatcacaagtacttggagctgggaagtgatagaccattaatgaaagctggtactttgcccattggttggatgaccttctacaacatacacgtgctatagatcggagatggcatgtcttgggattggggtacgactctggtgtcaaattgaatgaaattgagcaagcagctgtgattcattatgatggagttatgaaaccatggttagagattggactccagaagttcaagccgtactggaagaaacacgttaggtatgaacatccttttgtgcaacaatgcaatattcatgactaggaattttatcctttagcagtaggctgagttccatttcaccacaatcacgtagtgtaggaacccctcacgttcaccttattctttcacacattgatcccgcaatttttaacttgtaaagtccaacttttacgcccctcctgtccacgtttatttcctgctcagtggtcatagaaatttatcccacaatagcaataacttgggacctgatattggcatgtccctgagattcctgcaatgcttggacttgcatgtatattgatcttgtagaatgctaaaaatgttcttataatttaccagttgtagatgagataagaaatatatttctctgtgacattcttcttgtagaatgtatattgttggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="-" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="109650" stop="108075"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="109350" g_stop="109188" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="163" r_length="163" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="109187" i_stop="109013" i_length="175">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="109012" g_stop="108375" g_length="638"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="800" r_length="637" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="-" ref_id="SGN-U576361" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>801</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U576361" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="109350" e_stop="109188"/>
          <exon e_start="109012" e_stop="108375"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCATTCCGGCGAATGGATATGCTCATCAATTTCACTGACCCCATGGTGGCAACGAAATTTGACGCGAAATCATGCACATGGGCATTTGGGATGAATTTGTTTGATCTGCAGGAGTGGAGGAAACGAAACTTGACTGGGCTCTATCACAAGTACTTGGAGCTGGTATGCATCTATACCCTGTTGTTTGTTAATTACTTATGGAATTGACCAGCGATTAATCATATTCTTAACTTCTCTATAATAATGTATGTGTATAATTTTGACTTATAGCTGTTTTATTTAACATTGTTCTCCTTGTATTCGTCACTGCCTCATTGTTAGCCCATGCATTATGCAGGGAAGTGATAGACCATTAATGAAAGCTGGTACTTTGCCCATTGGTTGGATGACCTTCTACAAACATACACGTGCTATAGATCGGAGATGGCATGTCTTGGGATTGGGGTACGACTCTGGTGTCAAATTGAATGAAATTGAGCAAGCAGCTGTGATTCATTATGATGGAGTTATGAAACCATGGTTAGAGATTGGACTCCAGAAGTTCAAGCCGTACTGGAAGAAACACGTTAGGTATGAACATCCTTTTGTGCAACAATGCAATATTCATGACTAGGAATTTTATCCTTTAGCAGTAGGCTGAGTTCCATTTCACCACAATCACGTAGTGTAGGAACCCCTCACGTTCACCTTATTCTTTCACACATTGATCCCGCAATTTTTAACTTGTAAAGTCCAACTTTTACGCCCCTCCTGTCCACGTTTATTTCCTGCTCAGTGGTCATAGAAATTTATCCCACAATAGCAATAACTTGGGACCTGATATTGGCATGTCCCTGAGATTCCTGCAATGCTTGGACTTGCATGTATATTGATCTTGTAGAATGCTAAAAATGTTCTTATAATTTACCAGTTGTAGATGAGATAAGAAATATATTTCTCTGTGACATTCTTCTTGTAGAATGTATATTGTTGGAG</genome_strand>
        <mrna_strand>GTCATTCCGGCGAATGGATATGCTCATCAATTTCACTGACCCCATGGTGGCAACGAAATTTGACGCGAAATCATGCACATGGGCATTTGGGATGAATTTGTTTGATCTGCAGGAGTGGAGGAAACGAAACTTGACTGGGCTCTATCACAAGTACTTGGAGCTG...............................................................................................................................................................................GGAAGTGATAGACCATTAATGAAAGCTGGTACTTTGCCCATTGGTTGGATGACCTTCTAC-AACATACACGTGCTATAGATCGGAGATGGCATGTCTTGGGATTGGGGTACGACTCTGGTGTCAAATTGAATGAAATTGAGCAAGCAGCTGTGATTCATTATGATGGAGTTATGAAACCATGGTTAGAGATTGGACTCCAGAAGTTCAAGCCGTACTGGAAGAAACACGTTAGGTATGAACATCCTTTTGTGCAACAATGCAATATTCATGACTAGGAATTTTATCCTTTAGCAGTAGGCTGAGTTCCATTTCACCACAATCACGTAGTGTAGGAACCCCTCACGTTCACCTTATTCTTTCACACATTGATCCCGCAATTTTTAACTTGTAAAGTCCAACTTTTACGCCCCTCCTGTCCACGTTTATTTCCTGCTCAGTGGTCATAGAAATTTATCCCACAATAGCAATAACTTGGGACCTGATATTGGCATGTCCCTGAGATTCCTGCAATGCTTGGACTTGCATGTATATTGATCTTGTAGAATGCTAAAAATGTTCTTATAATTTACCAGTTGTAGATGAGATAAGAAATATATTTCTCTGTGACATTCTTCTTGTAGAATGTATATTGTTGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U574664" ref_strand="+" ref_description="SGN-U574664 Tomato 200607#2 [9 ESTs aligned] (*GB) gi|157348059|emb|CAO22646.1| (e_value=3e-123) unnamed; (*ATH) AT1G06780.1 (e_value=7e-96) | Symbol: None | glycosyl transferase family 8 protein, contains Pfam profile: PF01501 glycosyl transferase family 8 | chr1:2083423-2086961 FORWARD | Aliases: F4H5.13, F4H5_13; (*SWP) sp|Q9FWA4|GLTR_ARATH (e_value=1e-39) Uncharacterized glycosyltransferase At3g02350 OS=Arabidopsis thaliana GN=At3g02350; ">
      <seq>agacaataattgtataattgtacctaacctaaagttaattctccaaaaagtatataactccatttttactctctctttcttcctttgtttcttcttgaaatctcatttccttcacctgcacttcacgggtacacacgaacatggcactccccaatcaatctccgatttcatcgccattctttaatcaaaattaaatttttttaattaaaaaaaatacccaaatcgattccgtttgacctagaagacaaaaaaccagaaaaaaccctaagtaccatttttttttgtatcaggaactgtgtattttgatataccctttattgaatctgaatcgatccaaaaaacccaagtgttgtttgagttaattacatgtcttagatgaggtttactaggagatttacgaggatttttattatcctctgtttgattgctgtttttgttacaactccaatcttgttgttttcttcacataggttgattcatcttggttctgatgcatcgaaggagtttgttggagatttatccattcttaagcacaggatagaggttcaggcgcttaatgcagtccaacaggaagaagttgaaaccctcaaagaaccaatcttggatgtctaccgagatggaaaccaaatttctgcagtcagtttgtataccattgataagaatgatagtcttggtcaacctaagaatgtcagtttggctggaaataatgaaaccacacatgatacgaagaaagtaggtcaacaaaatttaccagaggaaacactgggcagacgagaaaaggcatcggaaaaatccagaccaaaagaggtgcgtcagaaatgtacagtctcatccacggagggtattggatgagagggtgaaggagattaaagatcaactgataagggccaaagcattcttgaattttgcaccggcaggtagtaactctaattttgtgaaagagataaagctacgaattaaagacttggaacgagctgctggtgaagtttcaaaagattctgatttgtctaggagggccatacagaagatgaaggctatgagtgcaaccctgtcgaaagccagtagattgttccctgattgctcggcaatggtgaaaaaacttcgtgcgatgacttataatgctgaggaacaacttcgagcgcaaaagaatcaagcttccttccttgaaaatcttgccggaagaactactccgaaaggccttcattgcctctccatgcggttaaccactgagtactttgccctacaaaccgaggagcagaaactacctaaccaacataaatttcagaatccagatctccaccacttcgctgttttctctgacaatgttttggcatgttctgcagttgtcaactcaactgtatcaactgctagggctccagagaagattgtgtttcatatagtgacggattctcttaacctaccagcaatgacaatgtggttcttgtcgaatcctcctggcaaagcaacaattcagatccagagcatagacatgtttgattggttactgaacaaggatactctgcagaagcaagagtctcttgatccaagatacacttctccactgaatcacctgcgcttctacctgcctgaaatttttccttatctcaacaagatagtgctccttgatcatgacgtggttgtgaaaagggatctaagtggactttggcacattaacatgaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="-" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="115836" stop="109094"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115536" g_stop="115043" g_length="494"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="493" r_length="493" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="115042" i_stop="114931" i_length="112">
            <donor d_prob="0.406" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="114930" g_stop="114896" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="494" r_stop="528" r_length="35" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="114895" i_stop="113511" i_length="1385">
            <donor d_prob="0.964" d_score="0.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="113510" g_stop="113469" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="529" r_stop="570" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="113468" i_stop="113378" i_length="91">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="113377" g_stop="113239" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="571" r_stop="709" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="113238" i_stop="113118" i_length="121">
            <donor d_prob="0.610" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="113117" g_stop="113041" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="710" r_stop="786" r_length="77" r_score="0.987"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="113040" i_stop="112144" i_length="897">
            <donor d_prob="0.125" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="112143" g_stop="111917" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="787" r_stop="1014" r_length="228" r_score="0.982"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="111916" i_stop="111079" i_length="838">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.870" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="111078" g_stop="110721" g_length="358"/>
          <reference_exon_boundary r_type="cDNA" r_start="1015" r_stop="1372" r_length="358" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="110720" i_stop="109704" i_length="1017">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="109703" g_stop="109394" g_length="310"/>
          <reference_exon_boundary r_type="cDNA" r_start="1373" r_stop="1682" r_length="310" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="-" ref_id="SGN-U574664" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>1682</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U574664" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115536" e_stop="115043"/>
          <exon e_start="114930" e_stop="114896"/>
          <exon e_start="113510" e_stop="113469"/>
          <exon e_start="113377" e_stop="113239"/>
          <exon e_start="113117" e_stop="113041"/>
          <exon e_start="112143" e_stop="111917"/>
          <exon e_start="111078" e_stop="110721"/>
          <exon e_start="109703" e_stop="109394"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACAATAATTGTATAATTGTACCTAACCTAAAGTTAATTCTCCAAAAAGTATATAACTCCATTTTTACTCTCTCTTTCTTCCTTTGTTTCTTCTTGAAATCTCATTTCCTTCACCTGCACTTCACGGGTACACACGAACATGGCACCCCCCAATCAATCTCCGATTTCATCGCCATTCTTTAATCAAAATTAAATTTTTTTAATTAAAAAAAA-ACCCAAATCGATTCCGTTTGACCTAGAAGACAAAAAACCAGAAAAAACCCT-AGTACCATTTTTTTTTTTGGTATCAGGAACTGTGTATTTTGATATACCCTTTATTGAATCTGAATCGATCCAAAAACCCCAAGTGTTGTTTGAGTTAATTACATGTCTTAGATGAGGTTTACTAGAAGATTTACGAGGATTTTTATTATCCTCTGTTTGATTGCTGTTTTTGTTACAACTCCAATCTTGTTGTTTTCTTCACATAGGTTGATTCATCTTGGTTCTGATGGTATGATTTTGATGTCTATGCATTTTCAAGTTGTTTGGGTTTGTGGGGTTCATTTTGTTTTTGCTAATTTGATTTGTTTGGTTGGATTTTGTTCACATTTGGGTTGTTGCAGCATCGAAGGAGTTTGTTGGAGATTTATCCATTCTTGTAAGATTTCTACTGTTACTGATTACTGTTTATTGCACTTCGGTTGTTGTATTATTTTGTGGTAGTGACTGTTCCTTTTTCAGTGTGTGTTGTCATGCTTTCATTAGTTTCAAACTGCTTTCCAATGCTTTACTTGAGATGAGATGTAGGGGTAAGGTTTGCTTATACAATACTCTCCTCAGACCCCACTCGTGGGATTACACCGGGTGTGTCGCTGTTGTAAGATTTCTTTTCCTTTATTCAGTTTTTGTTGCGGGTATTGCTCGTTTTGGTGTATGTTGTTGAGAGGAAGTAGATAAAGCAGCATAGATTATTTTGAACATTTGGTTTTACTATTTTACAATGCTTTTGCTAGTAATCTGTGGTAGCTTTTTGAGGGGAAGTAAATAAAGCAATATAGATTATTTTGAACATTTGATTTTTCTATTTTACAATGTGTTTGCTAGTAATCAGTAAGAGCTTTTTTTTTTTAATAGAAGAAGTTGTTTTTTGGGGACCCTTGTTGTTTGCCTATTTTCAAGCTGGTGTAAAAGATAAAGCTGTTAATGGTCCCCATACTTCCATAAGTTCCATTTACACTGTCTATTTGTTTTGGTATATGCTGCTGAGGGGAAGTTGATAAAGAAGCATGGATTGTTTTGACATTTGATTTTACTCGTGTAAATTGTGTTCTCTAGTAATTTATAAGAGCTTCTTCCTTTTTTATAGCTGAAGTTAGTTCTTTGGTACCCTTGTTGCTTGTAGATCAAGCTGTTAATGGTTCCCATACTTCCATTACCCTGCCCTTTTGTTTTGGTATATGTTGCTGAGGGGAAGTTGATAAAGAAGCATAGATTGTTTTAAAACGTTTGATTTTACTCGTGTAAATTTTGTTTTCTAGTAATTCGTAAGAGCTTCTTCTTTTTTTATAGCTGAAGTTAGTTTTTTGGTACCCTCGTTGTTTGCATAATTTGGACTTGGTGTAAAAGATCAAGCTTTAATGGTTCCCATACTTCCATTACCCTGTTCCTTTGTAAAGGCTAGGATGCAGAGTTTTCTGTGAGAAGAATTATCTACTTATTGCTTATGTCAGTTTTTGACTGGACCCCGAGTTTTATGATGTTTGTTAACTCATATAGAGTCTATTTTTTTAGTAGTGGTGATGATCAAAATGTCGAAGTAGTAGCCGTTAACAAGTTCGTTTGATAGAAAAGATCATATCAAAGTTAAAAATTTGAATGCTTTGGAAGTTCTAAAAAGATGGAAAGAGTGTCTTGTAAATTTAAACAAATGGAGTCTATTGTATGGGATCTGATTGAGATTTTTCTTATTTGGGTTTTGATTGGAATTGATGGATTATATTGTTATGATATGATCTGACTGATATTTCTATTTCTCCATTTCAGAAGCACAGGATAGAGGTTCAGGCGCTTAATGCAGTCCAACAGGTGCTATAAATTCTATATAAGTTCTTCCAACTGTAAACATCCACTTGAATTGAACTTTTGTTTGCAAACCTTTTTCTGCTTTTTGGTTTAGGAAGAAGTTGAAACCCTCAAAGAACCAATCTTGGATGTCTACCGAGATGGAAACCAAATTTCTGCAGTCAGTTTGTATACCATTGATAAGAATGATAGTCTTGGTCAACCTAAGAATGTCAGTTTGGCTGGAAATAATGGTAATTTAATTATTCAGATGTTCTTTACATCCCTCCCCCCCACCCCCCCAACCACCACCACAAGCATTTCTTTTCATTCAATAACTAGAAATTAATTGTACGCATTCCTACCTAATTTCAGAAACCACACATGATACGAAGAAAGTAGGTCAACAAAGTTTACCAGAGGAAACACTGGGCAGACGAGAAAAGGCATCGGTATGTATGGAAGTCCAATGGACACCACATCAAAGATCTCATTCATTTAGTGTGAAATTTTCTTCATCATTCCTTTTATTTAATAAATAGATTTCAATCTTTTAATTAGTACAGTATAAATCATAGAGGTGCTGTTGGTGGAATCATTTGCAAGTAGAGCGCAATGGTTACAAATCATTCATATAGTTGATCCTGAAATTTGGCATAGTGGGCATAGTGGAACAGTTGATTAAACTTAAAAGCCACTAATGTTGTTTCTCCAGAACTTGAGACTAATAGATATACTTTTATTATTGTTTGGCTAAAATAGATTGATGGTGGTTATATAAAATATCACGTGTTGTTTGCAGCTTGAGAGTTGCATATGCATACAGCTGGATTCCTTTGTTTGGTGGTGTTTGAATTTTGAAGGTGTTGCTTTAACGTTGTGATTGTGATAATGTGTAATAATAAACTATGTCTTCATGCTTTGGAACCTTACCAAGAAATGGTTTTCTTAGATTAAGTTAAATTAGCAAATTTAGATTTTGCATGTTCATGACGACAGGGAAGCTGTCGATTTGATGGTTCAGATGAATTTTTTTTGTTCTTTTTCTTTTTTTTTTCCTAAATCAAAAGAAAGTTTGACTGGACGCTTATAGGAAGGGAGTTTTCATGTGCCATGCTCATTTATGATTTTCACTTTTCAAGATTCAGCGGTTGTGTAAAATAAAATGTGATAAAGTAAATCTTAATTATTGTATTGAGGGTTTAAAGTAATATTGGTTTCTCTTTCCACTCGCCGTGGATGGTCGAATACTACTGGTCAACTCCTGGAATATGTTTTATGTATTTTGTGCATGTTAACTGCAATTAGCTCTGCATGTGATCACCTTATTTCACTTGGTTATATTGCAGGAAAAATCCAGACCAAAAGAGGTGCTTCAG-AATGTACAGTCTCATCCACGGAGGGTATTGGATGAGAGGGTGAAGGAGATTAAAGATCAGCTGATAAGGGCCAAAGCATTCTTGAATTTTGCACCGGCAGGTAGTAACTCTAATTTTGTGAAAGAGATAAAGCTACGAATTAAAGACTTGGAACGAGCTGCTGGTGAAGTTTCAAAAGATTCTGATTTGTCTAGGAGGTAAGATGATAATTCTTTTATCACTTTAATTCTTCGTAATACTGTAATAGCTATGACATCATCTCTTCGTAATAGCTTTGGTATCATCTCTTATTCGGACACAAGCTCAAACCTGGACACATAATGGAACCTGGCTGATTTGATATATGTTGGTTGCTCCACCGTCGCATAAATCTGCTTGGCTTGAGTAAATGGCTCTTTTGAGCTATTTTTTGTACCTTCTTTTTTTACAAGTGTGAGTTATGTTTTGTACTTATTGTGTCTGAAAGAGTATCCGGGAGAAGGTCGAAATGGTTAAATGAAATTGACAAATAACTTGGTGCTTAAGTTTATTATGTACACAAAAAGTGACTTAACTTGTTATTGGTCTATCAGTAGTTGACGAAAATTGGTTGGTCTGGTAACTAAGTGTTGAATGTTGGCAAGTGAATATGTTTTTTCTTAGTCTTGTCATTAAGTACTTTATGTATTTATTCTCTTTATGAACTTTTCCTATTTTTTAGTTCCAGACCCTACATAGTGGGATTTCACTGGGTTTTTTGTTGTCCTGTTTTTTAGTTTACTTTTTGGGCACAGTTATTAATCTGTGAAGGGATGTTTGGATGTCTTGAGATAAAAATGGGTTGGGGAAGTGACAATAAGGCTAATTTTGTAAAAGGGAAGTCGTCCGACTTTTTAAATGCTAAAATATGGGAAAAGTATTGAAGAGTGTAGAGGAAAGCTTTTACTTTTGGAAAGTTGATAGAATCTTTAAAATAGGGAAGTATACTATTTTGATTGGAAACTAGGGAGCAGTTAAATGATGTATGTATAATCTAAGAACAGTTATCATTTTTAGGGCCATACAGAAGATGAAGGCTATGAGTGCAACCCTGTCGAAAGCCAGTAGATTGTTCCCTGATTGCTCGGCAATGGTGAAAAAACTTCGTGCGATGACTTATAATGCTGAGGAACAACTTCGAGCGCAAAAGAATCAAGCTTCCTTCCTTGAAAATCTTGCCGGAAGAACTACTCCGAAAGGCCTTCATTGCCTCTCCATGCGGTTAACCACTGAGTACTTTGCCCTACAAACCGAGGAGCAGAAACTACCTAACCAACATAAATTTCAGAATCCAGATCTCCACCACTTCGCTGTTTTCTCTGACAATGTTTTGGCATGTTCTGCAGTTGTCAACTCAACTGTATCAACTGCTAGGGTGAGCATCTCCCTAATTTTCTTATTCTTGGCTTTGAATTTTCTTTTTTTCAATTTCTTACTACTCCCTCTCTTTCAATTTATGTGTATTACTTTCCTTTAGTCTATTTTAAAAAGAAAGCAAATTTTTGTATTTAATTCTCCTCTTTAGTTCCATTATCTCACATGGCATGTTTAAGATCACAAGATTCAAAAGACATTTTTGGTGTATTACACACATCTTTAATTCAAGACCACAAGATTCAAAAATCTCTTTATTTTCTTGATCTCTGTGCCAGTCATACCATTTTAAGAAAATTAAGAGAAGGGAGTATATTTTTTATTCACGCTCTATTTTTTCCTTTTATGTTTTCTCATTGTTAATCTGCTGTTATCTTAAGATGATTAAGAATAGAACATAGGTATTTGGAGTATATGTCATTTTGCACATGGCCTTTAGAGGAAAATTTTAACATTTAGTATCTATGTTAACTGATGCTTACCTGTAAGCAGCTTTGGCTTTAGTGCGGAACAGAGTAATTCCAATTGTGCATATAAGTCCACTATCGACTTATGAGAACACATGCTATTATTTGTTGGTGTCCTCACTTCTGCAAATAGAATTCCAAGAACTAGTATGATTGTGGTATCATTATCATTTGTAACTTATCATGCAACTGTCATGTATGGAAGGGCTAAACTCTTATGATTTTGTAACAGTAGATGCAAGGAGCAACTATTGATCACTATATATATTTTGAAGACAAATTAAATAATCATGGTTATGCACAAATTTATACTATTGATTATTATAGATTTTACAACAACAACATTCCGAGTGTGATCCCATAGGGTGGGTCTGGGGAGGGTCGTAAACCTTACCCCTACCTCGTTAGAAAATCGTTTTCCGACAGATCCCTGGCTCGAACAAAGCATTTGAAAAAAGGGAATACGGAAACTATTACTATATATTTTGAAGACATAAATTAAATAATGGTGGTTATGCACAAATTTATGCGAGTGTTTATGTATTTGGCAGGCTCCAGAGAAGATTGTGTTTCATATAGTGACGGATTCTCTTAACCTACCAGCAATGACAATGTGGTTCTTGTCGAATCCTCCTGGCAAAGCAACAATTCAGATCCAGAGCATAGACATGTTTGATTGGTTACTGAACAAGGATACTCTGCAGAAGCAAGAGTCTCTTGATCCAAGATACACTTCTCCACTGAATCACCTGCGCTTCTACCTGCCTGAAATTTTTCCTTATCTCAACAAGATAGTGCTCCTTGATCATGACGTGGTTGTGAAAAGGGATCTAAGTGGACTTTGGCACATCAACATGAATG</genome_strand>
        <mrna_strand>AGACAATAATTGTATAATTGTACCTAACCTAAAGTTAATTCTCCAAAAAGTATATAACTCCATTTTTACTCTCTCTTTCTTCCTTTGTTTCTTCTTGAAATCTCATTTCCTTCACCTGCACTTCACGGGTACACACGAACATGGCACTCCCCAATCAATCTCCGATTTCATCGCCATTCTTTAATCAAAATTAAATTTTTTTAATTAAAAAAAATACCCAAATCGATTCCGTTTGACCTAGAAGACAAAAAACCAGAAAAAACCCTAAGTACCA--TTTTTTTTT-GTATCAGGAACTGTGTATTTTGATATACCCTTTATTGAATCTGAATCGATCCAAAAAACCCAAGTGTTGTTTGAGTTAATTACATGTCTTAGATGAGGTTTACTAGGAGATTTACGAGGATTTTTATTATCCTCTGTTTGATTGCTGTTTTTGTTACAACTCCAATCTTGTTGTTTTCTTCACATAGGTTGATTCATCTTGGTTCTGATG................................................................................................................CATCGAAGGAGTTTGTTGGAGATTTATCCATTCTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCACAGGATAGAGGTTCAGGCGCTTAATGCAGTCCAACAG...........................................................................................GAAGAAGTTGAAACCCTCAAAGAACCAATCTTGGATGTCTACCGAGATGGAAACCAAATTTCTGCAGTCAGTTTGTATACCATTGATAAGAATGATAGTCTTGGTCAACCTAAGAATGTCAGTTTGGCTGGAAATAATG.........................................................................................................................AAACCACACATGATACGAAGAAAGTAGGTCAACAAAATTTACCAGAGGAAACACTGGGCAGACGAGAAAAGGCATCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAATCCAGACCAAAAGAGGTGCGTCAGAAATGTACAGTCTCATCCACGGAGGGTATTGGATGAGAGGGTGAAGGAGATTAAAGATCAACTGATAAGGGCCAAAGCATTCTTGAATTTTGCACCGGCAGGTAGTAACTCTAATTTTGTGAAAGAGATAAAGCTACGAATTAAAGACTTGGAACGAGCTGCTGGTGAAGTTTCAAAAGATTCTGATTTGTCTAGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCATACAGAAGATGAAGGCTATGAGTGCAACCCTGTCGAAAGCCAGTAGATTGTTCCCTGATTGCTCGGCAATGGTGAAAAAACTTCGTGCGATGACTTATAATGCTGAGGAACAACTTCGAGCGCAAAAGAATCAAGCTTCCTTCCTTGAAAATCTTGCCGGAAGAACTACTCCGAAAGGCCTTCATTGCCTCTCCATGCGGTTAACCACTGAGTACTTTGCCCTACAAACCGAGGAGCAGAAACTACCTAACCAACATAAATTTCAGAATCCAGATCTCCACCACTTCGCTGTTTTCTCTGACAATGTTTTGGCATGTTCTGCAGTTGTCAACTCAACTGTATCAACTGCTAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCAGAGAAGATTGTGTTTCATATAGTGACGGATTCTCTTAACCTACCAGCAATGACAATGTGGTTCTTGTCGAATCCTCCTGGCAAAGCAACAATTCAGATCCAGAGCATAGACATGTTTGATTGGTTACTGAACAAGGATACTCTGCAGAAGCAAGAGTCTCTTGATCCAAGATACACTTCTCCACTGAATCACCTGCGCTTCTACCTGCCTGAAATTTTTCCTTATCTCAACAAGATAGTGCTCCTTGATCATGACGTGGTTGTGAAAAGGGATCTAAGTGGACTTTGGCACATTAACATGAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U585707" ref_strand="+" ref_description="SGN-U585707 Tomato 200607#2 [8 ESTs aligned] (*GB) gi|116311046|emb|CAH67977.1| (e_value=3e-21) OSIGBa0142I02-OSIGBa0101B20.20; ">
      <seq>ggcgattggcggccaatcggccgaattgaacttaattaatatatatttgactaatagtcaccagaaaaagaagaagaaaaacatgttgggtaaatttatagagcaagtacaaataaatgcagcagcaagtgaagtgtggaatctctatggcactaatgaatttccaaaatttgttgttgaaaaactcccacacattgttgaaaaagttgagttaattgaaggcaatggaggagctggtacactagtacaagttagtttacttgggaatcctccatataaagagaagtttgtgttaatggatgatgaaaaaagagtgaaggaagtagagattgttgaaggtggatatcttgatcttggatttactttttatggattcaaatttgaagtcattgaaaaggatgaaaattcatctttcatcaaacttacaattgattttgagactaaagatgttgaaaatgttcatcttactattgccaatctccatgcttttattgccatcatgaaaacttctgctgattatcttgagaaataatcttattattattatcattatttggattttttttttcatagtttatgttgtaattttccattttacaatttcttattgttgttatttccctttcttgtaatgtattgtattatgatggacttactatttggatgttattaagtatctgttcatcaagcttcaacgtacgaaaaagaatcacttaatatttttttgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="-" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="118748" stop="116933"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="118439" g_stop="118213" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="254" r_length="227" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="118212" i_stop="117705" i_length="508">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.977" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="117704" g_stop="117232" g_length="473"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="729" r_length="475" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="-" ref_id="SGN-U585707" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>700</cumulative_length_of_scored_exons>
        <coverage percentage="0.960" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U585707" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="118439" e_stop="118213"/>
          <exon e_start="117704" e_stop="117232"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACTTAATTAATATATATTTGACTAATAGTCACCAGAAAAAGAAGAAGAAAAACATGTTGGGGAAATTTATAGAGCAAGTACAAATAAATGCAGCAGCAAGTGAAGTGTGGAATCTCTATGGCACTAATGAATTTCCAAAATTTGTTGTTGAAAAACTCCCACACATTGTTGAAAAAGTTGAGTTAATTGAAGGCAATGGAGGAGCTGGTACACTAGTGCAAGTTAGTAAGTTACTAATCTACTACTTCAAACCTCGTAGAATTTATCTACGATATTTATATCAAATTAATAAATATAAGCTCTGTGTCGTGCATGAACACAATTAGCAAAATTATCTCTTCCTTTTTTCTCTTCTTTCAAAGGCAACATATAAATGCAAAACGCTTTATATTTATTGATTTGAGATAAACATAAGGTGTGAAATAAATTTTCACCTATATTAGTGGAATTGTCTATTCCCTTGGCTTTTATACTTACCACAACAAATACATTATAGTTTTTTACCCGCTATATTATACCTATTACACGATTATCTCATACCTCCTATGCTTCACTTTATTTGATACTTATTTAAATAAGAAATATTTATAGCCACACAAATGTTATGGAATATTTAATATCACAATTACTTTTTTTTAATTGAACTTCGTGTTAAATCAAACTACGACAGATGATTTAAGTTTGTTTGATGGCTTTTTGATACTTTATTTTTGGACAAAATTAAATGTATTAGGTTTAGTTGGGAATCCTCCATATAAAGAGAAGTTTGTGTTAATGGATGATGAAAAAAGAGTGAAGGGAGTAGAGATTGTTGAAGGTGGATATCTTGATCTTGGATTTACTTTTTATGGATTCAAATTTGAAGTCATTGAAAAGGATGAAAATTCATCTTTCATCAAACTTACAATTGATTTTGAGACTAAAGATGTTGAAAATGTTCATCTTACTATTGCCAATCTCCAAGCTTTTATTGCCATCATGAAAACTTCTGCTGATTATCTTGAGAAATAATCTTATTATTATTATCATTATTTGGA--TTTTTTTTCATAGCTTATGTTGTAATTTTCCATTTTACAATTTCTTATTGTTGTTATTTCCCTTTCTTGTAATGTATTGTATTATGATGGACTTACTATTTGGATGTTATTAAGTATCTGTTCATCAAGCTTCAACGTATGAGAAAGAATCACTTAATACTTTTTTTTT</genome_strand>
        <mrna_strand>GAACTTAATTAATATATATTTGACTAATAGTCACCAGAAAAAGAAGAAGAAAAACATGTTGGGTAAATTTATAGAGCAAGTACAAATAAATGCAGCAGCAAGTGAAGTGTGGAATCTCTATGGCACTAATGAATTTCCAAAATTTGTTGTTGAAAAACTCCCACACATTGTTGAAAAAGTTGAGTTAATTGAAGGCAATGGAGGAGCTGGTACACTAGTACAAGTTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTACTTGGGAATCCTCCATATAAAGAGAAGTTTGTGTTAATGGATGATGAAAAAAGAGTGAAGGAAGTAGAGATTGTTGAAGGTGGATATCTTGATCTTGGATTTACTTTTTATGGATTCAAATTTGAAGTCATTGAAAAGGATGAAAATTCATCTTTCATCAAACTTACAATTGATTTTGAGACTAAAGATGTTGAAAATGTTCATCTTACTATTGCCAATCTCCATGCTTTTATTGCCATCATGAAAACTTCTGCTGATTATCTTGAGAAATAATCTTATTATTATTATCATTATTTGGATTTTTTTTTTCATAGTTTATGTTGTAATTTTCCATTTTACAATTTCTTATTGTTGTTATTTCCCTTTCTTGTAATGTATTGTATTATGATGGACTTACTATTTGGATGTTATTAAGTATCTGTTCATCAAGCTTCAACGTACGAAAAAGAATCACTTAATATTTTTTTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U565695" ref_strand="+" ref_description="SGN-U565695 Tomato 200607#2 [8 ESTs aligned] (*GB) gi|116311046|emb|CAH67977.1| (e_value=7e-25) OSIGBa0142I02-OSIGBa0101B20.20; ">
      <seq>ccgatgatgtgatataatatatatcatccagcagccaagatcccaagaattttaagtccaaattcaaacttggcaattgtaaccatatacacatttttgtaaattttacatggtgtactgctataaattccactagaaaaactatagcataataacatttttttcacgaatcattgcttactaaaaattctgcgtccatcacattcgcgctctatcgatatgaaggggacaatttcagatgagatagaagtgaacgtgcctgcaaatgtagcatgggagctctatggaacattacatttgtctaaattcattgtgcaagagttgcctactcttcttaacaaagttgatgtgattgaaggtgatggtagtactggaactgtcctcaaaatcacttttcctgaaggtacaccaggaataccttatttcaaggaaatattcaacatagtagacaatgaaaaaaaatacaagcaatctcaagtgattgaaggtggatatgttgatcttggatatattttttatggaattagatttgaagtgaatgagaaagatgaaaattcatgcatcacaaaatttacagtaaattatgaagttgaagatgtgaaacttgcaaatcatgcattcactatgtttgagccattgcagactgtcatcagatcagccaagacttatttaacaaataaacacacatctaattaattaagatgaccaaatttctattgttattcctatgaaattcaatcgtactctattcagacttcacttgtaagattatactgagtatgttttgtagtatattatattgcatagcatttcacacataaatatgtgacacaaaaataataatatcgtctgttctaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="+" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="119540" stop="121703"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="119837" g_stop="120238" g_length="402"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="403" r_length="403" r_score="0.940"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120239" i_stop="120945" i_length="707">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="120946" g_stop="121390" g_length="445"/>
          <reference_exon_boundary r_type="cDNA" r_start="404" r_stop="847" r_length="444" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="857" polyA_stop="869"/>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="+" ref_id="SGN-U565695" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>847</cumulative_length_of_scored_exons>
        <coverage percentage="0.975" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U565695" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="119837" e_stop="120238"/>
          <exon e_start="120946" e_stop="121390"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATATTTTATGATATAATATATAGTATCCAGCAGCCAAGATG-GAAGTCTTTTAAGTCCAAATTCAAACTTGGCAATTGTAACCTTATACACATTTTTGTAAATTTTACATGGTGTACTACTATAAATTCCACTAGAAAAACTAAAACATAATAACATTTTTTTCACGAATCATTGCTTACTAAAAATTCTGCGTCCATCACATCCGCGCTCTATCGATATGAAGGGGACAATTTCAGATGAGATAGAAGTGAATGTGCCTGCAAATGTAGCATGGGAGCTCTATGGAACATTACATTTGTCTAGGTTCATTGTGCAAGAGTTGCCTACTCTTCTCAACAAAGTTGATGTGATTGAAGGTGATGGTAGTACTGGAACTGTCCTCAAAATCACTTTTCCTCAAGGTAAGTAAAATCAATCTAATTAATCATCTTAAATTTAATGTTTATCGAGGAAATGATATCTTATGTCCACTAAAATCTGGATAGAAAAGATATGATCCAAAGAAGATTTTGCGTTTTCATTTAAAGATCCCATGTGTTATTTTTTCCTCTTATGTAGAGTAAATGTCATATAGCTTAAATCACACTCGTAGTGAGATATAAAATCAAATATCTCGTGCTTATTAGAGCTAGAAGCTTCAAAAGCAAAATAAGATCGCTCTGCTTCCTTGACAAGGCTCTTTTCATATGAGCCTAGTGTAGTATGTTATGGTAGTAGGCACTACTACGCCCTTTCATGATTGTTTGATCACTCTAGTGGTTTGGGTAATACGATCTACCCTCAAAAATATCTAACAAGATTGTATAAGATCTTAGTGATTACTTCAGCTAGCGTGTGAGATTTAGACAAAAATATTTCATCCAATTGGTGATCACCATTAATTTGGTTGCAAAAGGGAATCATTTACTTTATTAAATGTACAACAACAAAATTAGCATAGTCAGTGTAATCTTACAAGTAAGGTCTCTGTTATACCTTATCTTGGCAGGTAGATAACGTGTTTCTCCTAGAACCTCGACTCAAGAAAAGAATAAACGCTAACATTTAGTAACACCATCAAAAAACTTAATTAAATGATATTAATTATGTTTTTTTTTTGTTAAAATAGGTACATCAGGAATACCTTATTTCAAGGAAAGATTCAACATAGTAGACAATGAAAAAAGATACAAGCAATCTCAAGTGATTGAAGGTGGATATGTTGATCTTGGATATATTTTTTATGGAATTAGATTTGAAGTGAATGAGAAAGATGAAAATTCATGCATCACAAAATTTACAGTAAATTATGAAGTTGAAGATGTGAAACTTGCAAATCATGCATTCACTATGTTTGAGCCATTGCAGACTGTCATCAGATCAGCCAAGACTTATTTAACAAATAAACACACATCTAATTAATTAAGATGACCAAGTTTTTATTGTTATTCCAATGAAATTCAATTGTACTCTATTCAAATTTCACTCGCAAGATTATACTGAGTATGTTGTTGTAGTATATCATATTGCATAACGTTTCACACATAAATATGTGACACAAAAATAATAATATC</genome_strand>
        <mrna_strand>CCGATGATGTGATATAATATATATCATCCAGCAGCCAAGATCCCAAGAATTTTAAGTCCAAATTCAAACTTGGCAATTGTAACCATATACACATTTTTGTAAATTTTACATGGTGTACTGCTATAAATTCCACTAGAAAAACTATAGCATAATAACATTTTTTTCACGAATCATTGCTTACTAAAAATTCTGCGTCCATCACATTCGCGCTCTATCGATATGAAGGGGACAATTTCAGATGAGATAGAAGTGAACGTGCCTGCAAATGTAGCATGGGAGCTCTATGGAACATTACATTTGTCTAAATTCATTGTGCAAGAGTTGCCTACTCTTCTTAACAAAGTTGATGTGATTGAAGGTGATGGTAGTACTGGAACTGTCCTCAAAATCACTTTTCCTGAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACACCAGGAATACCTTATTTCAAGGAAATATTCAACATAGTAGACAATGAAAAAAAATACAAGCAATCTCAAGTGATTGAAGGTGGATATGTTGATCTTGGATATATTTTTTATGGAATTAGATTTGAAGTGAATGAGAAAGATGAAAATTCATGCATCACAAAATTTACAGTAAATTATGAAGTTGAAGATGTGAAACTTGCAAATCATGCATTCACTATGTTTGAGCCATTGCAGACTGTCATCAGATCAGCCAAGACTTATTTAACAAATAAACACACATCTAATTAATTAAGATGACCAAATTTCTATTGTTATTCCTATGAAATTCAATCGTACTCTATTCAGACTTCACTTGTAAGATTATACTGAGTATGTT-TTGTAGTATATTATATTGCATAGCATTTCACACATAAATATGTGACACAAAAATAATAATATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U591185" ref_strand="+" ref_description="SGN-U591185 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|2494076|sp|P93338|GAPN_NICPL (e_value=2e-23) NADP-dependent glyceraldehyde-3-phosphate dehydrogenase (Non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase) (Glyceraldehyde-3-phosphate dehydrogenase [NADP+]) (Triosephosphate dehydrogenase); (*ATH) AT2G24270.2 (e_value=1e-23)  Symbol: None | NADP-dependent glyceraldehyde-3-phosphate dehydrogenase, putative, similar to NADP-dependent glyceraldehyde-3-phosphate dehydrogenase (NON-phosphorylating glyceraldehyde 3-phosphate; glyceraldehyde-3-phosphate dehydrogenase (NADP+)) (... ; (*SWP) sp|P93338|GAPN_NICPL (e_value=1e-24) NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Nicotiana plumbaginifolia GN=GAPN; ">
      <seq>gatccaaagtaggaatccaccattttctcttcttagtctttttttttttaattattgtgaaaggaagtttaaaatttggtgtaaaaacggctggaaatggagtatttgcagaaataattgatggagaagtgtacaaatattattgtgaaggagaatggaaaaaatcagcttctggaaaatctgttgctattattaatcctactacaagaaagatacaatacaaagttcaagcatgtacacaagaagaggtgaacaaagtaatggaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="+" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="125011" stop="126502"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125307" g_stop="125538" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="231" r_length="231" r_score="0.927"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125539" i_stop="126165" i_length="627">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.984" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126166" g_stop="126202" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="232" r_stop="268" r_length="37" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="+" ref_id="SGN-U591185" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>269</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U591185" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125307" e_stop="125538"/>
          <exon e_start="126166" e_stop="126202"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAATAATAAAAATCCACCATTTTCTCTTCTTATCCTTTTTTTTTTTTAATTATTGTGAAAAAAAATCTAAAATTTGGTGTAAAAATGGCTGGAAATGGAGTATTTGCAGAAATAATTGATGGAGAAGTGTACAAATATTATTGTGAAGGAGAATGGAAAAAATCAGCTTCTGGAAAATCTGTTGCTATTATTAATCCTACTACAAGAAAGACACAATACAAAGTTCAAGGTATGTTATTTTTAGAAAAATAAAAATTATCAAGATTGAAAATTTTGTGTGTGTAGAGTAAATATATCAAGATTGATGTTTGTTTGAGATTTTAATGGTTGAAAGGGTAGCGTTTGCGTAACTGGTAAAGTTATTACCACGTAACTGTGACATGGATCAAGTTGCGTACAATAGACTCATGTAGTGTGGTCTTTTCGTGTATCAGACTGTTTCATGTTCTAGGACAGAGACAAGATTTTAACTTTATGGATTCTGAATAGAAAAATGTCATGATGTATAATGAATTTTCTGTCATTTGTTTCTAAGGTTCCTTGAATTTTGTGGATAGTGCTCTGGAATTTGTTGTACGGGTGACAGAATCAAGATTTCAACTTTATGAATTTTGTATTTTAGAACAATAATTACACTATCGTCAGTGTAGTTTAACCTATTATAACATGTTAGTTAACATTTTATTGAGTCGTAGGTAAATGTCATTATGTAAAATTACCGAGTCATGTGAACTCTTTAATAACACATTGATAAAATTTCTTGATTTCGCATCGAGGTACTTTTGCTTGTATTGTATTATTTGGTTTACGTACCAGAACTGATAACATTCGAGATTTGTGAATGTTTATTGTTCAGCATGTACACAAGAAGAGGTGAACAAAGTAATGGAAAT</genome_strand>
        <mrna_strand>GATCCAAAGTAGGAATCCACCATTTTCTCTTCTTAGTC-TTTTTTTTTTTAATTATTGTGAAAGGAAGTTTAAAATTTGGTGTAAAAACGGCTGGAAATGGAGTATTTGCAGAAATAATTGATGGAGAAGTGTACAAATATTATTGTGAAGGAGAATGGAAAAAATCAGCTTCTGGAAAATCTGTTGCTATTATTAATCCTACTACAAGAAAGATACAATACAAAGTTCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTACACAAGAAGAGGTGAACAAAGTAATGGAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U590075" ref_strand="+" ref_description="SGN-U590075 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|2494076|sp|P93338|GAPN_NICPL (e_value=1e-104) NADP-dependent glyceraldehyde-3-phosphate dehydrogenase (Non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase) (Glyceraldehyde-3-phosphate dehydrogenase [NADP+]) (Triosephosphate dehydrogenase); (*ATH) AT2G24270.2 (e_value=1e-101)  Symbol: None | NADP-dependent glyceraldehyde-3-phosphate dehydrogenase, putative, similar to NADP-dependent glyceraldehyde-3-phosphate dehydrogenase (NON-phosphorylating glyceraldehyde 3-phosphate; glyceraldehyde-3-phosphate dehydrogenase (NADP+)) (... ; (*SWP) sp|P93338|GAPN_NICPL (e_value=1e-105) NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Nicotiana plumbaginifolia GN=GAPN; ">
      <seq>atcaaaacagaacatgctagtgctttttccttaacaatcaagttgtcggaactgcattgtataaggaaatcaaaacgaatgtatgcattttatgaaatcgacatattagtaggtttttctaatgatatactgacttcatggattgcctgatttactatcactaaacttgatcacatttctgttcgtgtgttcgatgaacttctctttgattcattaatcatcaaagatatgaatgcaatgtagagttcatattaacacgtataatatgtcgatatccttgtttatcacagtggtcaaagatgcacagctgttaaggtcgtgttggtgatggaatctgttgctgacattcttgttgagaaggtaaatgccaaagtggcaaagttaaccgttggtccacccgaagataattgtgatatcactccagttgtctccgagtcatccgcaaatttcatcgaggggttggtcatggacgcaaaggagaaagatgcaacattttgccagccatacaagagagaaggcaaccttatctggcccttgttgttagacaatgttaggccggacatgagaatcgcttgggaagaacccttcggtccagttttgcccgttattcggatcaactcagtcgaagaaggaattcaccactgcaatgctagcaatttcggtctgcagggttgtgtgttcaccaaagacatcaacaaagcaatactgatcagtgatgcaatggaaaccggaaccgttcagattaactcagctcctgctcgtggaccggatcattttccgttccagggtattaaggacagtggaattggatcacaagggatcactaacagtattaacacatgactaaagtgaagaccactgtgatcaatttgccaacccctttctatactatggggtaaattaatcactattttttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002D20-prOgK/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0002D20.2" temp_strand="+" temp_description="C07HBa0002D20.2  AC212605.2 htgs_phase:2 submitted_to_sgn_as:gi|239582798|gb|AC212605.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0002D20, *** SEQUENCING IN PROGRESS ***">
        <position start="128566" stop="130488"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="128866" g_stop="129533" g_length="668"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="669" r_length="669" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="129534" i_stop="129842" i_length="309">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="129843" g_stop="129959" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="670" r_stop="786" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="129960" i_stop="130056" i_length="97">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="130057" g_stop="130188" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="787" r_stop="917" r_length="131" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002D20.2" gen_strand="+" ref_id="SGN-U590075" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>917</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002D20.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U590075" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="128866" e_stop="129533"/>
          <exon e_start="129843" e_stop="129959"/>
          <exon e_start="130057" e_stop="130188"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCAAAACAGAACATGCTAGTGCTTTTTCCTTAACAATCAAGTTGTCGGAACTGCATTGTATAAGGAAATCAAAACGAATGTATGCATTTTATGAAATCGACATATTAGTAGGCTTTTCTAATGATATAATGACTTCATGGATTGCCTGATTTACTATCACTAAACTTGATCACATTTCTGTTCGTGTGTTTGATGAACTTCTCTTTGATTCATTAATCATCAAAGATATGAATGCAATGTAGAGTTCATATT-GCACGTATAATATGTCGATATCCTTGTTTATCACAGTGGTCAAAGATGCACAGCTGTTAAGGTCGTGTTGGTGATGGAATCTGTTGCTGACATTCTTGTTGAGAAGGTAAATGCCAAAGTGGCAAAGTTAACCGTTGGGCCACCTGAAGATAATTGTGATATCACTCCAGTTGTCTCCGAGTCATCCGCAAATTTCATCGAGGGGTTGGTCATGGACGCAAAGGAGAAAGATGCAACATTTTGCCAGCCATACAAGAGAGAAGGCAACCTTATCTGGCCCTTGTTGTTAGACAATGTTAGGCCGGACATGAGAATCGCTTGGGAAGAACCCTTTGGTCCAGTTTTGCCCGTTATTCGGATAAACTCAGTCGAAGAAGGAATTCACCACTGCAATGCTAGCAATTTCGGTCTGCAGGTACTTCTTTCTCTCCATCTATCACAAGAAAAAAGTCACCCGTCTTTCGTTTGGAGGGATTAGAAAGAGATAATCTCCGCATAACCAATGTAACGTTTGATTCGCAGTATAAGAGAAATAATCCCATAGTAAATAATACTCGCATTACGTTTTACAAGAACCTAACATAACATTCAACATATAGGTTATTCACCCTATAATGATTCCGTCCTTTCATTATTATTCCCTGCATAAACAATTACTAAACGACATAACTAGCGCGTGAACCAAACGACTCCGTGGTATTTGACATTTGACTCTTAACTACAGGGTTGTGTGTTCACCAAAGACATCAACAAAGCAATACTGATCAGTGATGCAATGGAAACCGGAACCGTTCAGATTAACTCAGCTCCTGCTCGTGGACCGGATCATTTTCCGTTCCAGGTAATTAAACTCCAAATTCAACATCGCGAATTACATAATCTTGATTATCTTTGCGATAATTTCGTAGTAATTAAGGTGATTAATTTCGTTTTAACAGGGTATTAAGGACAGCGGAATTGGATCACAAGGGATCACTAACAGTATTAACATGATGACTAAAGTGAAGACCACTGTGATCAATTTGCCAACCCCTTCTTATACTATGGGGTAAATTAATCACTGTTTTTTG</genome_strand>
        <mrna_strand>ATCAAAACAGAACATGCTAGTGCTTTTTCCTTAACAATCAAGTTGTCGGAACTGCATTGTATAAGGAAATCAAAACGAATGTATGCATTTTATGAAATCGACATATTAGTAGGTTTTTCTAATGATATACTGACTTCATGGATTGCCTGATTTACTATCACTAAACTTGATCACATTTCTGTTCGTGTGTTCGATGAACTTCTCTTTGATTCATTAATCATCAAAGATATGAATGCAATGTAGAGTTCATATTAACACGTATAATATGTCGATATCCTTGTTTATCACAGTGGTCAAAGATGCACAGCTGTTAAGGTCGTGTTGGTGATGGAATCTGTTGCTGACATTCTTGTTGAGAAGGTAAATGCCAAAGTGGCAAAGTTAACCGTTGGTCCACCCGAAGATAATTGTGATATCACTCCAGTTGTCTCCGAGTCATCCGCAAATTTCATCGAGGGGTTGGTCATGGACGCAAAGGAGAAAGATGCAACATTTTGCCAGCCATACAAGAGAGAAGGCAACCTTATCTGGCCCTTGTTGTTAGACAATGTTAGGCCGGACATGAGAATCGCTTGGGAAGAACCCTTCGGTCCAGTTTTGCCCGTTATTCGGATCAACTCAGTCGAAGAAGGAATTCACCACTGCAATGCTAGCAATTTCGGTCTGCAG.....................................................................................................................................................................................................................................................................................................................GGTTGTGTGTTCACCAAAGACATCAACAAAGCAATACTGATCAGTGATGCAATGGAAACCGGAACCGTTCAGATTAACTCAGCTCCTGCTCGTGGACCGGATCATTTTCCGTTCCAG.................................................................................................GGTATTAAGGACAGTGGAATTGGATCACAAGGGATCACTAACAGTATTAACA-CATGACTAAAGTGAAGACCACTGTGATCAATTTGCCAACCCCTTTCTATACTATGGGGTAAATTAATCACTATTTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>35</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="10841" PGL_stop="5710"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="10841" e_stop="10475"/>
            <exon e_start="7139" e_stop="7116"/>
            <exon e_start="6200" e_stop="5710"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.986" acc_prob="0.996" e_score="0.997"/>
          <exon-intron don_prob="0.996" acc_prob="0.986" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="10841" e_stop="10475" e_length="367"/>
          </exon>
          <intron i_serial="1" don_prob="0.986" acc_prob="0.996">
            <gDNA_intron_boundary i_start="10474" i_stop="7140" i_length="3335"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="7139" e_stop="7116" e_length="24"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.986">
            <gDNA_intron_boundary i_start="7115" i_stop="6201" i_length="915"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="6200" e_stop="5710" e_length="491"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10841" stop="10475"/>
              <exon start="7139" stop="7116"/>
              <exon start="6200" stop="5710"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U568763" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATTTACTGTAAGACCTTCAAGAAAGTAGATGGAAAGTAGCAGTACTAGTTAATTAATCAGCACTTATTTTCAGCTGAACATCTTTAACAATTTGAAAAATCCCAATTAACCCCATAACAGTAGATCCATTTTGCCTTGTAGATCTCACTCCCAATTTGCTCTCAAAGCAAAAAGGAAACATGGCAAGGCAATCTGGGAATTGCTTAAGATGTTGTTTAGTAATTTTTGCTGTAGTTTCTGCTCTTTGTGTATCTGGTCCTGCTATTTATTGGAAGTTCAAGAAACTTAAAGTTAAAGCTGCTCAATCTTGTATGCCTTGTAAATGTGACTGTTCTCCTCCTCTTTCTTTGCTTGAAGTTGCTCCTG : GCTTGGCGAATCTTACAATCACAG : ACTGCGGAAAAGATGATCCGGACCTTAAGGAGGAGATGGAGAAACAGTTCGTTGATTTATTATCGGAAGAGCTGAAACTGCAGGAGGCTGTTGACAAGGAGCACGCCCATCATATGAACATCACCTTTGTGGAGGCGAGGAGGTTAGCTACCGAGTACCAAAAGGAGGCTGAGAAATGCATTGCTACAACGGAAACTTGTGAAGTCGGGAGAGAAAGAGCTGTTGTGTTGTATGCCAAGGAAATGAAGTTGACTAACCTTTGGGAACGCAGAGCGCGCCAAGCTGGTTGGAAAGACTGAATGCAAAAATGAAGTTTTCATCACACTAGCTCAAATTTTGTTGTCCGCTATGTAGCTTTATGCTAGTTATATTTCTCTGTATGAGCACAAAATTGCTCATATTTCTTCATCTAATATATGTATTTTACCTGCTCTCCTGTGTACCTTGCCATTATCATATGAAATATAAACTTCCCCACTATAGTTTCTATG</gDNA_template>
            <first_frame> N  L  L  *  D  L  Q  E  S  R  W  K  V  A  V  L  V  N  *  S  A  L  I  F  S  *  T  S  L  T  I  *  K  I  P  I  N  P  I  T  V  D  P  F  C  L  V  D  L  T  P  N  L  L  S  K  Q  K  G  N  M  A  R  Q  S  G  N  C  L  R  C  C  L  V  I  F  A  V  V  S  A  L  C  V  S  G  P  A  I  Y  W  K  F  K  K  L  K  V  K  A  A  Q  S  C  M  P  C  K  C  D  C  S  P  P  L  S  L  L  E  V  A  P   : G  L  A  N  L  T  I  T   : D  C  G  K  D  D  P  D  L  K  E  E  M  E  K  Q  F  V  D  L  L  S  E  E  L  K  L  Q  E  A  V  D  K  E  H  A  H  H  M  N  I  T  F  V  E  A  R  R  L  A  T  E  Y  Q  K  E  A  E  K  C  I  A  T  T  E  T  C  E  V  G  R  E  R  A  V  V  L  Y  A  K  E  M  K  L  T  N  L  W  E  R  R  A  R  Q  A  G  W  K  D  *  M  Q  K  *  S  F  H  H  T  S  S  N  F  V  V  R  Y  V  A  L  C  *  L  Y  F  S  V  *  A  Q  N  C  S  Y  F  F  I  *  Y  M  Y  F  T  C  S  P  V  Y  L  A  I  I  I  *  N  I  N  F  P  T  I  V  S  M </first_frame>
            <second_frame>  I  Y  C  K  T  F  K  K  V  D  G  K  *  Q  Y  *  L  I  N  Q  H  L  F  S  A  E  H  L  *  Q  F  E  K  S  Q  L  T  P  *  Q  *  I  H  F  A  L  *  I  S  L  P  I  C  S  Q  S  K  K  E  T  W  Q  G  N  L  G  I  A  *  D  V  V  *  *  F  L  L  *  F  L  L  F  V  Y  L  V  L  L  F  I  G  S  S  R  N  L  K  L  K  L  L  N  L  V  C  L  V  N  V  T  V  L  L  L  F  L  C  L  K  L  L  L  :  A  W  R  I  L  Q  S  Q  :  T  A  E  K  M  I  R  T  L  R  R  R  W  R  N  S  S  L  I  Y  Y  R  K  S  *  N  C  R  R  L  L  T  R  S  T  P  I  I  *  T  S  P  L  W  R  R  G  G  *  L  P  S  T  K  R  R  L  R  N  A  L  L  Q  R  K  L  V  K  S  G  E  K  E  L  L  C  C  M  P  R  K  *  S  *  L  T  F  G  N  A  E  R  A  K  L  V  G  K  T  E  C  K  N  E  V  F  I  T  L  A  Q  I  L  L  S  A  M  *  L  Y  A  S  Y  I  S  L  Y  E  H  K  I  A  H  I  S  S  S  N  I  C  I  L  P  A  L  L  C  T  L  P  L  S  Y  E  I  *  T  S  P  L  *  F  L   </second_frame>
            <third_frame>   F  T  V  R  P  S  R  K  *  M  E  S  S  S  T  S  *  L  I  S  T  Y  F  Q  L  N  I  F  N  N  L  K  N  P  N  *  P  H  N  S  R  S  I  L  P  C  R  S  H  S  Q  F  A  L  K  A  K  R  K  H  G  K  A  I  W  E  L  L  K  M  L  F  S  N  F  C  C  S  F  C  S  L  C  I  W  S  C  Y  L  L  E  V  Q  E  T  *  S  *  S  C  S  I  L  Y  A  L  *  M  *  L  F  S  S  S  F  F  A  *  S  C  S  W :   L  G  E  S  Y  N  H  R :   L  R  K  R  *  S  G  P  *  G  G  D  G  E  T  V  R  *  F  I  I  G  R  A  E  T  A  G  G  C  *  Q  G  A  R  P  S  Y  E  H  H  L  C  G  G  E  E  V  S  Y  R  V  P  K  G  G  *  E  M  H  C  Y  N  G  N  L  *  S  R  E  R  K  S  C  C  V  V  C  Q  G  N  E  V  D  *  P  L  G  T  Q  S  A  P  S  W  L  E  R  L  N  A  K  M  K  F  S  S  H  *  L  K  F  C  C  P  L  C  S  F  M  L  V  I  F  L  C  M  S  T  K  L  L  I  F  L  H  L  I  Y  V  F  Y  L  L  S  C  V  P  C  H  Y  H  M  K  Y  K  L  P  H  Y  S  F  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10745" stop="10475"/>
                    <exon start="7139" stop="7116"/>
                    <exon start="6200" stop="5902"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>591</number_coding_nucleotides>
                  <number_encoded_amino_acids>197</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KIPINPITVDPFCLVDLTPNLLSKQKGNMARQSGNCLRCCLVIFAVVSALCVSGPAIYWKFKKLKVKAAQSCMPCKCDCSPPLSLLEVAPGLANLTITDCGKDDPDLKEEMEKQFVDLLSEELKLQEAVDKEHAHHMNITFVEARRLATEYQKEAEKCIATTETCEVGRERAVVLYAKEMKLTNLWERRARQAGWKD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="8933" e_stop="8030"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.975"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.975">
            <gDNA_exon_boundary e_start="8933" e_stop="8030" e_length="904"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8933" stop="8030"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U597434" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTTGAACTTAGTAAAGATTGAGGTCGGATAGGATGTAGTAGAAGCTCCAGAGAACTTTGATTGACACGCTCATGAAGGAAAATAGGAGAGTTGTGTCTACGTACTTTTGCACAAAAGCTCTCTGCTACATTTTTTCTTCCTGGTTTGGAAGCATGTTAATCAAGTCTCACCTTAAGTTTCTACCTTGTTGTCCCCATAATTAAGCAAACAATGAAAGATGAGCTTAGTAAAGATGTGATTTTTTGCTTATGTGGTAACAACGTACTAAAGGTTCGTGACAGGATGTATTCTGCTTTTGTGTTTGGGTTAAATCCACCGAACCAGAACAGATTAACAAATGCTTTCATTAAGTATCTTGTTCTTTATCCTCAAAAAAATTTAATTATCTTGTTCCTCATGCACCTTATCAGAAACTTGTTGCCTAGCAAAAAGTGGGGATGAAGGTCTTGCTTCTAAAGAATAAAGACATCATTTATGTAAAATAAATGGCTAATCTTACGACTATTGCTAGATCTTATCAACGATTGAGGTTTAGTAGAAGCTTAATAGAAGCTTTGATTGATAGGCTCTGACAAAATAAGTGAGCTCTGCTAGAGACTGTCACAAAGCTCTATGTTAGACATTTTTCCTTCATGGTTTTGGAGTTTATCGATCAAGCCTCACATCAAGTTTCTACTTTCCTAGCCCTATAGTTAAGCTAACTATGAATAAATGAGAGAATTCTTTCTGTCCCGTTGAACTGACAGTTCCTTCTAATTTTAGTGAAAAATGATCTGTGTAGACGATACCTACTGCTAGTTTTGGGTTGAGGCATAGTTATACTATTATAGTGTTTCAAGAATCCACCCTTGCTGAAAACTAAGGGCTGAAGGATGTAGAACTTTAATTACATGCAATATTTAT</gDNA_template>
            <first_frame> A  *  T  *  *  R  L  R  S  D  R  M  *  *  K  L  Q  R  T  L  I  D  T  L  M  K  E  N  R  R  V  V  S  T  Y  F  C  T  K  A  L  C  Y  I  F  S  S  W  F  G  S  M  L  I  K  S  H  L  K  F  L  P  C  C  P  H  N  *  A  N  N  E  R  *  A  *  *  R  C  D  F  L  L  M  W  *  Q  R  T  K  G  S  *  Q  D  V  F  C  F  C  V  W  V  K  S  T  E  P  E  Q  I  N  K  C  F  H  *  V  S  C  S  L  S  S  K  K  F  N  Y  L  V  P  H  A  P  Y  Q  K  L  V  A  *  Q  K  V  G  M  K  V  L  L  L  K  N  K  D  I  I  Y  V  K  *  M  A  N  L  T  T  I  A  R  S  Y  Q  R  L  R  F  S  R  S  L  I  E  A  L  I  D  R  L  *  Q  N  K  *  A  L  L  E  T  V  T  K  L  Y  V  R  H  F  S  F  M  V  L  E  F  I  D  Q  A  S  H  Q  V  S  T  F  L  A  L  *  L  S  *  L  *  I  N  E  R  I  L  S  V  P  L  N  *  Q  F  L  L  I  L  V  K  N  D  L  C  R  R  Y  L  L  L  V  L  G  *  G  I  V  I  L  L  *  C  F  K  N  P  P  L  L  K  T  K  G  *  R  M  *  N  F  N  Y  M  Q  Y  L  </first_frame>
            <second_frame>  L  E  L  S  K  D  *  G  R  I  G  C  S  R  S  S  R  E  L  *  L  T  R  S  *  R  K  I  G  E  L  C  L  R  T  F  A  Q  K  L  S  A  T  F  F  L  P  G  L  E  A  C  *  S  S  L  T  L  S  F  Y  L  V  V  P  I  I  K  Q  T  M  K  D  E  L  S  K  D  V  I  F  C  L  C  G  N  N  V  L  K  V  R  D  R  M  Y  S  A  F  V  F  G  L  N  P  P  N  Q  N  R  L  T  N  A  F  I  K  Y  L  V  L  Y  P  Q  K  N  L  I  I  L  F  L  M  H  L  I  R  N  L  L  P  S  K  K  W  G  *  R  S  C  F  *  R  I  K  T  S  F  M  *  N  K  W  L  I  L  R  L  L  L  D  L  I  N  D  *  G  L  V  E  A  *  *  K  L  *  L  I  G  S  D  K  I  S  E  L  C  *  R  L  S  Q  S  S  M  L  D  I  F  P  S  W  F  W  S  L  S  I  K  P  H  I  K  F  L  L  S  *  P  Y  S  *  A  N  Y  E  *  M  R  E  F  F  L  S  R  *  T  D  S  S  F  *  F  *  *  K  M  I  C  V  D  D  T  Y  C  *  F  W  V  E  A  *  L  Y  Y  Y  S  V  S  R  I  H  P  C  *  K  L  R  A  E  G  C  R  T  L  I  T  C  N  I  Y </second_frame>
            <third_frame>   L  N  L  V  K  I  E  V  G  *  D  V  V  E  A  P  E  N  F  D  *  H  A  H  E  G  K  *  E  S  C  V  Y  V  L  L  H  K  S  S  L  L  H  F  F  F  L  V  W  K  H  V  N  Q  V  S  P  *  V  S  T  L  L  S  P  *  L  S  K  Q  *  K  M  S  L  V  K  M  *  F  F  A  Y  V  V  T  T  Y  *  R  F  V  T  G  C  I  L  L  L  C  L  G  *  I  H  R  T  R  T  D  *  Q  M  L  S  L  S  I  L  F  F  I  L  K  K  I  *  L  S  C  S  S  C  T  L  S  E  T  C  C  L  A  K  S  G  D  E  G  L  A  S  K  E  *  R  H  H  L  C  K  I  N  G  *  S  Y  D  Y  C  *  I  L  S  T  I  E  V  *  *  K  L  N  R  S  F  D  *  *  A  L  T  K  *  V  S  S  A  R  D  C  H  K  A  L  C  *  T  F  F  L  H  G  F  G  V  Y  R  S  S  L  T  S  S  F  Y  F  P  S  P  I  V  K  L  T  M  N  K  *  E  N  S  F  C  P  V  E  L  T  V  P  S  N  F  S  E  K  *  S  V  *  T  I  P  T  A  S  F  G  L  R  H  S  Y  T  I  I  V  F  Q  E  S  T  L  A  E  N  *  G  L  K  D  V  E  L  *  L  H  A  I  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8773" stop="8492"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>279</number_coding_nucleotides>
                  <number_encoded_amino_acids>93</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SSLTLSFYLVVPIIKQTMKDELSKDVIFCLCGNNVLKVRDRMYSAFVFGLNPPNQNRLTNAFIKYLVLYPQKNLIILFLMHLIRNLLPSKKWG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="10184" e_stop="9717"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="10184" e_stop="9717" e_length="468"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10184" stop="9717"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U603277" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGGAATTAGAATTTCGAGTTTATGAGTTTTAGATTCTAGATGAGGTATAATGTAACCCCACCAGTGGGGTCTGGGGAGATTTTTGAGCGTATGCAGACCTTATCTCTACCGGAGGACGGAGGTAGAGAGACTGTTTTCGATAGACCTTAGGCTCAAGAAAAAAGAATTAACAGGAGTAAGTAAGTCATGTCAAAATACTATAAGAGATTCTAGAAATATAGCGGATCCAGATAAATTACTTGTACGTATTTTAGTGGATTTGTAAGCATAAAATAGTGGATTTGAACCAAAACTATCAAGAAACTTCACAGCAGCGCCTCCCCTGCTGAGCTGTCGTATGGACATCAATACTTGCTTATTTGGTTTTTTCTCATGTTGACCATTGGATTATGTGTTTATAATGTTAGATTGGCTGTAGATTTTCTGTTGTATGTGAAGAGTTTATTAAGTAACCTCTTAATTATCATG</gDNA_template>
            <first_frame> W  N  *  N  F  E  F  M  S  F  R  F  *  M  R  Y  N  V  T  P  P  V  G  S  G  E  I  F  E  R  M  Q  T  L  S  L  P  E  D  G  G  R  E  T  V  F  D  R  P  *  A  Q  E  K  R  I  N  R  S  K  *  V  M  S  K  Y  Y  K  R  F  *  K  Y  S  G  S  R  *  I  T  C  T  Y  F  S  G  F  V  S  I  K  *  W  I  *  T  K  T  I  K  K  L  H  S  S  A  S  P  A  E  L  S  Y  G  H  Q  Y  L  L  I  W  F  F  L  M  L  T  I  G  L  C  V  Y  N  V  R  L  A  V  D  F  L  L  Y  V  K  S  L  L  S  N  L  L  I  I  M </first_frame>
            <second_frame>  G  I  R  I  S  S  L  *  V  L  D  S  R  *  G  I  M  *  P  H  Q  W  G  L  G  R  F  L  S  V  C  R  P  Y  L  Y  R  R  T  E  V  E  R  L  F  S  I  D  L  R  L  K  K  K  E  L  T  G  V  S  K  S  C  Q  N  T  I  R  D  S  R  N  I  A  D  P  D  K  L  L  V  R  I  L  V  D  L  *  A  *  N  S  G  F  E  P  K  L  S  R  N  F  T  A  A  P  P  L  L  S  C  R  M  D  I  N  T  C  L  F  G  F  F  S  C  *  P  L  D  Y  V  F  I  M  L  D  W  L  *  I  F  C  C  M  *  R  V  Y  *  V  T  S  *  L  S   </second_frame>
            <third_frame>   E  L  E  F  R  V  Y  E  F  *  I  L  D  E  V  *  C  N  P  T  S  G  V  W  G  D  F  *  A  Y  A  D  L  I  S  T  G  G  R  R  *  R  D  C  F  R  *  T  L  G  S  R  K  K  N  *  Q  E  *  V  S  H  V  K  I  L  *  E  I  L  E  I  *  R  I  Q  I  N  Y  L  Y  V  F  *  W  I  C  K  H  K  I  V  D  L  N  Q  N  Y  Q  E  T  S  Q  Q  R  L  P  C  *  A  V  V  W  T  S  I  L  A  Y  L  V  F  S  H  V  D  H  W  I  M  C  L  *  C  *  I  G  C  R  F  S  V  V  C  E  E  F  I  K  *  P  L  N  Y  H  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10129" stop="9920"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PHQWGLGRFLSVCRPYLYRRTEVERLFSIDLRLKKKELTGVSKSCQNTIRDSRNIADPDKLLVRILVDL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="16145" PGL_stop="11372"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="16145" e_stop="15672"/>
            <exon e_start="15325" e_stop="15145"/>
            <exon e_start="14475" e_stop="14342"/>
            <exon e_start="13935" e_stop="13823"/>
            <exon e_start="13590" e_stop="13467"/>
            <exon e_start="12969" e_stop="12814"/>
            <exon e_start="12729" e_stop="12577"/>
            <exon e_start="12261" e_stop="12182"/>
            <exon e_start="11868" e_stop="11819"/>
            <exon e_start="11708" e_stop="11372"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.392" e_score="0.985"/>
          <exon-intron don_prob="0.967" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.878" acc_prob="0.937" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.885" e_score="0.988"/>
          <exon-intron don_prob="1.000" acc_prob="0.886" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.966" e_score="1.000"/>
          <exon-intron don_prob="0.830" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.973" e_score="1.000"/>
          <exon-intron don_prob="0.958" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.985">
            <gDNA_exon_boundary e_start="16145" e_stop="15672" e_length="474"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.392">
            <gDNA_intron_boundary i_start="15671" i_stop="15326" i_length="346"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="15325" e_stop="15145" e_length="181"/>
          </exon>
          <intron i_serial="2" don_prob="0.967" acc_prob="0.995">
            <gDNA_intron_boundary i_start="15144" i_stop="14476" i_length="669"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="14475" e_stop="14342" e_length="134"/>
          </exon>
          <intron i_serial="3" don_prob="0.878" acc_prob="0.937">
            <gDNA_intron_boundary i_start="14341" i_stop="13936" i_length="406"/>
          </intron>
          <exon e_serial="4" e_score="0.988">
            <gDNA_exon_boundary e_start="13935" e_stop="13823" e_length="113"/>
          </exon>
          <intron i_serial="4" don_prob="0.995" acc_prob="0.885">
            <gDNA_intron_boundary i_start="13822" i_stop="13591" i_length="232"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="13590" e_stop="13467" e_length="124"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.886">
            <gDNA_intron_boundary i_start="13466" i_stop="12970" i_length="497"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="12969" e_stop="12814" e_length="156"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.966">
            <gDNA_intron_boundary i_start="12813" i_stop="12730" i_length="84"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="12729" e_stop="12577" e_length="153"/>
          </exon>
          <intron i_serial="7" don_prob="0.830" acc_prob="0.986">
            <gDNA_intron_boundary i_start="12576" i_stop="12262" i_length="315"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="12261" e_stop="12182" e_length="80"/>
          </exon>
          <intron i_serial="8" don_prob="0.999" acc_prob="0.973">
            <gDNA_intron_boundary i_start="12181" i_stop="11869" i_length="313"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="11868" e_stop="11819" e_length="50"/>
          </exon>
          <intron i_serial="9" don_prob="0.958" acc_prob="1.000">
            <gDNA_intron_boundary i_start="11818" i_stop="11709" i_length="110"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="11708" e_stop="11372" e_length="337"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16145" stop="15672"/>
              <exon start="15325" stop="15145"/>
              <exon start="14475" stop="14342"/>
              <exon start="13935" stop="13852"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U585376" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13854" stop="13823"/>
              <exon start="13590" stop="13467"/>
              <exon start="12969" stop="12814"/>
              <exon start="12729" stop="12577"/>
              <exon start="12261" stop="12182"/>
              <exon start="11868" stop="11819"/>
              <exon start="11708" stop="11372"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U576504" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TATAAAGTTAGCCTAAGAAAAAGACACAAGTCACAAGTTGATGAATAAATAAATCATTATCATCTTCATCAAGAAAATAAGATTATTTTTTTTATATCTATGGCTTCTTTTTCTTCTTACATTTTCTTGATTATGTTGTTCATAATTTCTGTTGGTGTTTCAGAAATTAAGTCAATATATCTTCCAGGAACTTATCAATCTTCATTACTAGTAAAGAAACATGATGAAAAGACAAAAATACCCTTTAAAACTCATTATTTTCCTCAAATTCTTGATCATTTCACTTTTCTACCAAAGAGTTGTAAAGTATTTTATCAAAAATATCTCATAAATGATCAATATTGGAATAAAGATGGAGGAGGGCCCATCTTTGTTTACACTGGCAATGAAGGGAATATTGATTGGTTTGCAGCAAATACTGGATTCATGATTGATATTGTTCCGAACTTTAATGCACTCCTGATCTTCATCGAA : CATAGGTTTTATGGAGATTCAATGCCATTTGGAAATAATTCTTACAAATCAGCAAAGACTTTGGGTTACTTGAATTCACAACAAGCATTGGCTGATTATGCTGTCCTCATAAGGAGCTTGAAGCAAAATCTTTCTTCTGATTCATCACCTGTTGTGGTTTTTGGTGGCTCTTATGGTGGAA : TGTTGGCTGCTTGGTTTAGACTAAAGTATCCACATATAGCCATTGGAGCAGTGGCATCTTCAGCACCAATATTGCAATTTGAAAAAATCACACCATGGTCAAGCTTCTATGATGCTGTTTCCCAAGATTTCAAG : GATGCAAGTTTGAATTGTTATAAAGTGATAAAGGGGAGTTGGGCAGAGTTGGATGCATTATCAAGACATGATGATGGATTGATTAAAGTTAGTAAACTTTTCAGAACTTGCAA : GGCTTTACAATCAGTTTTTTCAGCTAGAGATTGGCTATGGGAAGCTTTTGTATACACAGCTATGGTTAATTATCCTACTGAGGCTAACTTTATGATGCCATTGCCAGCATATCCAGTTAAAGAG : ATGTGCAAGATAATTGATGGATTGCCAAAAGGAGGTTCAAAGCTTAGCAAGGCATTTGCTGCAGCAAGTTTATATTACAATTATACACAAACAGAAAAATGTTTCAATTTAGAAGGTGGTACTGATTCTCATGGTCTTCATGGTTGGGATTGGCAG : GCATGTACAGAGATGGTTATGCCAATGACTTGTTCAAATGAAAGTATGTTTCCTCCATCTTCCTTTAGCTACAAGGAATTCTCAAAAGATTGTAAGAAGCAATTTGGAGTAAAACCTAGACCACATTGGATCACTACTGAATTTGGTGGCTAT : AGAATTGAGCAAGTTCTCAAGAGATTTGGCAGCAACATGATATTCTCTAATGGAATGCAAGATCCTTGGAGCAGAGGAGG : TGTATTGAAAAATATATCATCTAGCATTGTGGCTTTGGTAACTCAGAAAG : GTGCACACCATGTTGACTTTAGATCAGAGACAAAGAATGACCCAGACTGGTTAATTATGCAAAGGAAGCAAGAAGTGGCTATTATTGAAAAGTGGCTAGAAGAGTACTATAAAGATCTCAAACAAAATTAGATACAATATGAATATAGTGTCACTTTAGACACATCATGTAATGGACATTATTGTGGAAGAAAATAAAAAGGTGTCATAAATTAAATTGAATTATATTAATTTGAGTTTTATTTCTATAGGTTAATCTTTTGAAAAAAAATATATACGAGATATATATGTATTTTGAATAGGTATATATTTTTAATATACTTATCTAAATTTTCACT</gDNA_template>
            <first_frame> Y  K  V  S  L  R  K  R  H  K  S  Q  V  D  E  *  I  N  H  Y  H  L  H  Q  E  N  K  I  I  F  F  I  S  M  A  S  F  S  S  Y  I  F  L  I  M  L  F  I  I  S  V  G  V  S  E  I  K  S  I  Y  L  P  G  T  Y  Q  S  S  L  L  V  K  K  H  D  E  K  T  K  I  P  F  K  T  H  Y  F  P  Q  I  L  D  H  F  T  F  L  P  K  S  C  K  V  F  Y  Q  K  Y  L  I  N  D  Q  Y  W  N  K  D  G  G  G  P  I  F  V  Y  T  G  N  E  G  N  I  D  W  F  A  A  N  T  G  F  M  I  D  I  V  P  N  F  N  A  L  L  I  F  I  E  :  H  R  F  Y  G  D  S  M  P  F  G  N  N  S  Y  K  S  A  K  T  L  G  Y  L  N  S  Q  Q  A  L  A  D  Y  A  V  L  I  R  S  L  K  Q  N  L  S  S  D  S  S  P  V  V  V  F  G  G  S  Y  G  G   : M  L  A  A  W  F  R  L  K  Y  P  H  I  A  I  G  A  V  A  S  S  A  P  I  L  Q  F  E  K  I  T  P  W  S  S  F  Y  D  A  V  S  Q  D  F  K  :  D  A  S  L  N  C  Y  K  V  I  K  G  S  W  A  E  L  D  A  L  S  R  H  D  D  G  L  I  K  V  S  K  L  F  R  T  C  K :   A  L  Q  S  V  F  S  A  R  D  W  L  W  E  A  F  V  Y  T  A  M  V  N  Y  P  T  E  A  N  F  M  M  P  L  P  A  Y  P  V  K  E  :  M  C  K  I  I  D  G  L  P  K  G  G  S  K  L  S  K  A  F  A  A  A  S  L  Y  Y  N  Y  T  Q  T  E  K  C  F  N  L  E  G  G  T  D  S  H  G  L  H  G  W  D  W  Q  :  A  C  T  E  M  V  M  P  M  T  C  S  N  E  S  M  F  P  P  S  S  F  S  Y  K  E  F  S  K  D  C  K  K  Q  F  G  V  K  P  R  P  H  W  I  T  T  E  F  G  G  Y  :  R  I  E  Q  V  L  K  R  F  G  S  N  M  I  F  S  N  G  M  Q  D  P  W  S  R  G  G :   V  L  K  N  I  S  S  S  I  V  A  L  V  T  Q  K   : G  A  H  H  V  D  F  R  S  E  T  K  N  D  P  D  W  L  I  M  Q  R  K  Q  E  V  A  I  I  E  K  W  L  E  E  Y  Y  K  D  L  K  Q  N  *  I  Q  Y  E  Y  S  V  T  L  D  T  S  C  N  G  H  Y  C  G  R  K  *  K  G  V  I  N  *  I  E  L  Y  *  F  E  F  Y  F  Y  R  L  I  F  *  K  K  I  Y  T  R  Y  I  C  I  L  N  R  Y  I  F  L  I  Y  L  S  K  F  S   </first_frame>
            <second_frame>  I  K  L  A  *  E  K  D  T  S  H  K  L  M  N  K  *  I  I  I  I  F  I  K  K  I  R  L  F  F  L  Y  L  W  L  L  F  L  L  T  F  S  *  L  C  C  S  *  F  L  L  V  F  Q  K  L  S  Q  Y  I  F  Q  E  L  I  N  L  H  Y  *  *  R  N  M  M  K  R  Q  K  Y  P  L  K  L  I  I  F  L  K  F  L  I  I  S  L  F  Y  Q  R  V  V  K  Y  F  I  K  N  I  S  *  M  I  N  I  G  I  K  M  E  E  G  P  S  L  F  T  L  A  M  K  G  I  L  I  G  L  Q  Q  I  L  D  S  *  L  I  L  F  R  T  L  M  H  S  *  S  S  S  N :   I  G  F  M  E  I  Q  C  H  L  E  I  I  L  T  N  Q  Q  R  L  W  V  T  *  I  H  N  K  H  W  L  I  M  L  S  S  *  G  A  *  S  K  I  F  L  L  I  H  H  L  L  W  F  L  V  A  L  M  V  E  :  C  W  L  L  G  L  D  *  S  I  H  I  *  P  L  E  Q  W  H  L  Q  H  Q  Y  C  N  L  K  K  S  H  H  G  Q  A  S  M  M  L  F  P  K  I  S  R :   M  Q  V  *  I  V  I  K  *  *  R  G  V  G  Q  S  W  M  H  Y  Q  D  M  M  M  D  *  L  K  L  V  N  F  S  E  L  A   : R  L  Y  N  Q  F  F  Q  L  E  I  G  Y  G  K  L  L  Y  T  Q  L  W  L  I  I  L  L  R  L  T  L  *  C  H  C  Q  H  I  Q  L  K  R :   C  A  R  *  L  M  D  C  Q  K  E  V  Q  S  L  A  R  H  L  L  Q  Q  V  Y  I  T  I  I  H  K  Q  K  N  V  S  I  *  K  V  V  L  I  L  M  V  F  M  V  G  I  G  R :   H  V  Q  R  W  L  C  Q  *  L  V  Q  M  K  V  C  F  L  H  L  P  L  A  T  R  N  S  Q  K  I  V  R  S  N  L  E  *  N  L  D  H  I  G  S  L  L  N  L  V  A  I :   E  L  S  K  F  S  R  D  L  A  A  T  *  Y  S  L  M  E  C  K  I  L  G  A  E  E   : V  Y  *  K  I  Y  H  L  A  L  W  L  W  *  L  R  K  :  V  H  T  M  L  T  L  D  Q  R  Q  R  M  T  Q  T  G  *  L  C  K  G  S  K  K  W  L  L  L  K  S  G  *  K  S  T  I  K  I  S  N  K  I  R  Y  N  M  N  I  V  S  L  *  T  H  H  V  M  D  I  I  V  E  E  N  K  K  V  S  *  I  K  L  N  Y  I  N  L  S  F  I  S  I  G  *  S  F  E  K  K  Y  I  R  D  I  Y  V  F  *  I  G  I  Y  F  *  Y  T  Y  L  N  F  H  </second_frame>
            <third_frame>   *  S  *  P  K  K  K  T  Q  V  T  S  *  *  I  N  K  S  L  S  S  S  S  R  K  *  D  Y  F  F  Y  I  Y  G  F  F  F  F  L  H  F  L  D  Y  V  V  H  N  F  C  W  C  F  R  N  *  V  N  I  S  S  R  N  L  S  I  F  I  T  S  K  E  T  *  *  K  D  K  N  T  L  *  N  S  L  F  S  S  N  S  *  S  F  H  F  S  T  K  E  L  *  S  I  L  S  K  I  S  H  K  *  S  I  L  E  *  R  W  R  R  A  H  L  C  L  H  W  Q  *  R  E  Y  *  L  V  C  S  K  Y  W  I  H  D  *  Y  C  S  E  L  *  C  T  P  D  L  H  R   : T  *  V  L  W  R  F  N  A  I  W  K  *  F  L  Q  I  S  K  D  F  G  L  L  E  F  T  T  S  I  G  *  L  C  C  P  H  K  E  L  E  A  K  S  F  F  *  F  I  T  C  C  G  F  W  W  L  L  W  W  N :   V  G  C  L  V  *  T  K  V  S  T  Y  S  H  W  S  S  G  I  F  S  T  N  I  A  I  *  K  N  H  T  M  V  K  L  L  *  C  C  F  P  R  F  Q   : G  C  K  F  E  L  L  *  S  D  K  G  E  L  G  R  V  G  C  I  I  K  T  *  *  W  I  D  *  S  *  *  T  F  Q  N  L  Q  :  G  F  T  I  S  F  F  S  *  R  L  A  M  G  S  F  C  I  H  S  Y  G  *  L  S  Y  *  G  *  L  Y  D  A  I  A  S  I  S  S  *  R   : D  V  Q  D  N  *  W  I  A  K  R  R  F  K  A  *  Q  G  I  C  C  S  K  F  I  L  Q  L  Y  T  N  R  K  M  F  Q  F  R  R  W  Y  *  F  S  W  S  S  W  L  G  L  A   : G  M  Y  R  D  G  Y  A  N  D  L  F  K  *  K  Y  V  S  S  I  F  L  *  L  Q  G  I  L  K  R  L  *  E  A  I  W  S  K  T  *  T  T  L  D  H  Y  *  I  W  W  L   : *  N  *  A  S  S  Q  E  I  W  Q  Q  H  D  I  L  *  W  N  A  R  S  L  E  Q  R  R  :  C  I  E  K  Y  I  I  *  H  C  G  F  G  N  S  E  R :   C  T  P  C  *  L  *  I  R  D  K  E  *  P  R  L  V  N  Y  A  K  E  A  R  S  G  Y  Y  *  K  V  A  R  R  V  L  *  R  S  Q  T  K  L  D  T  I  *  I  *  C  H  F  R  H  I  M  *  W  T  L  L  W  K  K  I  K  R  C  H  K  L  N  *  I  I  L  I  *  V  L  F  L  *  V  N  L  L  K  K  N  I  Y  E  I  Y  M  Y  F  E  *  V  Y  I  F  N  I  L  I  *  I  F  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16097" stop="15672"/>
                    <exon start="15325" stop="15145"/>
                    <exon start="14475" stop="14342"/>
                    <exon start="13935" stop="13823"/>
                    <exon start="13590" stop="13467"/>
                    <exon start="12969" stop="12814"/>
                    <exon start="12729" stop="12577"/>
                    <exon start="12261" stop="12182"/>
                    <exon start="11868" stop="11819"/>
                    <exon start="11708" stop="11578"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1545</number_coding_nucleotides>
                  <number_encoded_amino_acids>515</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>INHYHLHQENKIIFFISMASFSSYIFLIMLFIISVGVSEIKSIYLPGTYQSSLLVKKHDEKTKIPFKTHYFPQILDHFTFLPKSCKVFYQKYLINDQYWNKDGGGPIFVYTGNEGNIDWFAANTGFMIDIVPNFNALLIFIEHRFYGDSMPFGNNSYKSAKTLGYLNSQQALADYAVLIRSLKQNLSSDSSPVVVFGGSYGGMLAAWFRLKYPHIAIGAVASSAPILQFEKITPWSSFYDAVSQDFKDASLNCYKVIKGSWAELDALSRHDDGLIKVSKLFRTCKALQSVFSARDWLWEAFVYTAMVNYPTEANFMMPLPAYPVKEMCKIIDGLPKGGSKLSKAFAAASLYYNYTQTEKCFNLEGGTDSHGLHGWDWQACTEMVMPMTCSNESMFPPSSFSYKEFSKDCKKQFGVKPRPHWITTEFGGYRIEQVLKRFGSNMIFSNGMQDPWSRGGVLKNISSSIVALVTQKGAHHVDFRSETKNDPDWLIMQRKQEVAIIEKWLEEYYKDLKQN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="18968" PGL_stop="22944"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="18968" e_stop="19406"/>
            <exon e_start="20301" e_stop="20398"/>
            <exon e_start="20491" e_stop="20595"/>
            <exon e_start="20711" e_stop="20776"/>
            <exon e_start="21749" e_stop="21835"/>
            <exon e_start="22641" e_stop="22944"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.683" e_score="0.993"/>
          <exon-intron don_prob="0.995" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.910" acc_prob="0.891" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.963" e_score="1.000"/>
          <exon-only e_score="0.980"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="18968" e_stop="19406" e_length="439"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.683">
            <gDNA_intron_boundary i_start="19407" i_stop="20300" i_length="894"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="20301" e_stop="20398" e_length="98"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.998">
            <gDNA_intron_boundary i_start="20399" i_stop="20490" i_length="92"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="20491" e_stop="20595" e_length="105"/>
          </exon>
          <intron i_serial="3" don_prob="0.982" acc_prob="0.998">
            <gDNA_intron_boundary i_start="20596" i_stop="20710" i_length="115"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="20711" e_stop="20776" e_length="66"/>
          </exon>
          <intron i_serial="4" don_prob="0.910" acc_prob="0.891">
            <gDNA_intron_boundary i_start="20777" i_stop="21748" i_length="972"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="21749" e_stop="21835" e_length="87"/>
          </exon>
          <intron i_serial="5" don_prob="0.994" acc_prob="0.963">
            <gDNA_intron_boundary i_start="21836" i_stop="22640" i_length="805"/>
          </intron>
          <exon e_serial="6" e_score="0.980">
            <gDNA_exon_boundary e_start="22641" e_stop="22944" e_length="304"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18968" stop="19406"/>
              <exon start="20301" stop="20398"/>
              <exon start="20491" stop="20595"/>
              <exon start="20711" stop="20776"/>
              <exon start="21749" stop="21835"/>
              <exon start="22641" stop="22944"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574515" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19091" stop="19406"/>
              <exon start="20301" stop="20398"/>
              <exon start="20491" stop="20595"/>
              <exon start="20711" stop="20776"/>
              <exon start="21749" stop="21790"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596129" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCTCTCTCTCTCTTTTTTTTCCTTTTTCTTATTCTTATTCCTTCTCCATTAAATAATTAATAGCAATAAAATAAAATAAAATAAATAGTAATAAAATTCAACACATCGCGTAATCTGAAGAAGAATCAGTTCTATTCCTTCGAAGGCGGCCATAGAAGAGAGGAAAAAAAAATTCTTTGAAATTTATTTTGGTGTTTTTGGATAATTTTTTGAAGAAGTTTGAGAGGTTTAGAGAGAAAAACAGAGATGAAGATCACAGCTTTGATGGTGTTGAAATGCAATCCAGAAGGTTCGGATCCTGTGATCTTAGCAAACGCTTCTGATGTTAACCATTTTGGGTATTTTCAGAGATCCAGCGTTAAGGAATTTATCGTTTTTGTGGGTCGAACTGTTGCTAAAAGGAACCCACCTGGACAACGACAATCTGTTCAGCATGAAG : AATACAAGGTGCATTCATACAATCGAAATGGTTTATGTGCTTTGGGCTTCATGGATGATCACTATCCAGTTCGAAGTGCATTTTCACTGCTCAACCAG : GTTTTGGATGAGTATCTGAAGAATTTTGGTGAGTCATGGAAGACGGCTCAATGCGACAATGCTCAACCATGGCCTTATCTGAATGAAGCTCTAGCCAAATTTCAG : GATCCTGCTGAGGCCGATAAGCTGTTCAAAATTCAACGAGAGTTGGATGAAACAAAAATTATTCTC : CATAAGACAATTGACAGTGTCTTAGAACGTGGTGAGAAGCTAGACAGTTTGGTTGAGAAGAGTTCAGATCTCAGTGCTGCTTCACAG : ATGTTCTACAAGCAGGCAAAGAAAACCAATTCATGCTGTACAATTTTATAGACTGTTTTCTGAAGATGGAAGGGGGCGATTCAACCACGGATAAACTTGTGTCTATGTTGCATATGAAGTATCGGAGAATTGTTTGTTTATATCATCCATGATATTCTATAAGCTTGAATTCTTTTTGTTCTCTATTGTAATATGATCTCAGATGAAGAGAAAGAGTCAGTCTCAGATTGATAATGTTGTTTGAAAGTTGTGATGTGATGATGTTCACCTACATGTAGTTACTATATAACATATTTCCTGTTTC</gDNA_template>
            <first_frame> S  L  S  L  F  F  F  L  F  L  I  L  I  P  S  P  L  N  N  *  *  Q  *  N  K  I  K  *  I  V  I  K  F  N  T  S  R  N  L  K  K  N  Q  F  Y  S  F  E  G  G  H  R  R  E  E  K  K  I  L  *  N  L  F  W  C  F  W  I  I  F  *  R  S  L  R  G  L  E  R  K  T  E  M  K  I  T  A  L  M  V  L  K  C  N  P  E  G  S  D  P  V  I  L  A  N  A  S  D  V  N  H  F  G  Y  F  Q  R  S  S  V  K  E  F  I  V  F  V  G  R  T  V  A  K  R  N  P  P  G  Q  R  Q  S  V  Q  H  E   : E  Y  K  V  H  S  Y  N  R  N  G  L  C  A  L  G  F  M  D  D  H  Y  P  V  R  S  A  F  S  L  L  N  Q  :  V  L  D  E  Y  L  K  N  F  G  E  S  W  K  T  A  Q  C  D  N  A  Q  P  W  P  Y  L  N  E  A  L  A  K  F  Q  :  D  P  A  E  A  D  K  L  F  K  I  Q  R  E  L  D  E  T  K  I  I  L  :  H  K  T  I  D  S  V  L  E  R  G  E  K  L  D  S  L  V  E  K  S  S  D  L  S  A  A  S  Q  :  M  F  Y  K  Q  A  K  K  T  N  S  C  C  T  I  L  *  T  V  F  *  R  W  K  G  A  I  Q  P  R  I  N  L  C  L  C  C  I  *  S  I  G  E  L  F  V  Y  I  I  H  D  I  L  *  A  *  I  L  F  V  L  Y  C  N  M  I  S  D  E  E  K  E  S  V  S  D  *  *  C  C  L  K  V  V  M  *  *  C  S  P  T  C  S  Y  Y  I  T  Y  F  L  F  </first_frame>
            <second_frame>  L  S  L  S  F  F  S  F  F  L  F  L  F  L  L  H  *  I  I  N  S  N  K  I  K  *  N  K  *  *  *  N  S  T  H  R  V  I  *  R  R  I  S  S  I  P  S  K  A  A  I  E  E  R  K  K  K  F  F  E  I  Y  F  G  V  F  G  *  F  F  E  E  V  *  E  V  *  R  E  K  Q  R  *  R  S  Q  L  *  W  C  *  N  A  I  Q  K  V  R  I  L  *  S  *  Q  T  L  L  M  L  T  I  L  G  I  F  R  D  P  A  L  R  N  L  S  F  L  W  V  E  L  L  L  K  G  T  H  L  D  N  D  N  L  F  S  M  K  :  N  T  R  C  I  H  T  I  E  M  V  Y  V  L  W  A  S  W  M  I  T  I  Q  F  E  V  H  F  H  C  S  T  R :   F  W  M  S  I  *  R  I  L  V  S  H  G  R  R  L  N  A  T  M  L  N  H  G  L  I  *  M  K  L  *  P  N  F  R :   I  L  L  R  P  I  S  C  S  K  F  N  E  S  W  M  K  Q  K  L  F  S :   I  R  Q  L  T  V  S  *  N  V  V  R  S  *  T  V  W  L  R  R  V  Q  I  S  V  L  L  H  R :   C  S  T  S  R  Q  R  K  P  I  H  A  V  Q  F  Y  R  L  F  S  E  D  G  R  G  R  F  N  H  G  *  T  C  V  Y  V  A  Y  E  V  S  E  N  C  L  F  I  S  S  M  I  F  Y  K  L  E  F  F  L  F  S  I  V  I  *  S  Q  M  K  R  K  S  Q  S  Q  I  D  N  V  V  *  K  L  *  C  D  D  V  H  L  H  V  V  T  I  *  H  I  S  C  F </second_frame>
            <third_frame>   S  L  S  L  F  F  P  F  S  Y  S  Y  S  F  S  I  K  *  L  I  A  I  K  *  N  K  I  N  S  N  K  I  Q  H  I  A  *  S  E  E  E  S  V  L  F  L  R  R  R  P  *  K  R  G  K  K  N  S  L  K  F  I  L  V  F  L  D  N  F  L  K  K  F  E  R  F  R  E  K  N  R  D  E  D  H  S  F  D  G  V  E  M  Q  S  R  R  F  G  S  C  D  L  S  K  R  F  *  C  *  P  F  W  V  F  S  E  I  Q  R  *  G  I  Y  R  F  C  G  S  N  C  C  *  K  E  P  T  W  T  T  T  I  C  S  A  *  R :   I  Q  G  A  F  I  Q  S  K  W  F  M  C  F  G  L  H  G  *  S  L  S  S  S  K  C  I  F  T  A  Q  P   : G  F  G  *  V  S  E  E  F  W  *  V  M  E  D  G  S  M  R  Q  C  S  T  M  A  L  S  E  *  S  S  S  Q  I  S   : G  S  C  *  G  R  *  A  V  Q  N  S  T  R  V  G  *  N  K  N  Y  S   : P  *  D  N  *  Q  C  L  R  T  W  *  E  A  R  Q  F  G  *  E  E  F  R  S  Q  C  C  F  T   : D  V  L  Q  A  G  K  E  N  Q  F  M  L  Y  N  F  I  D  C  F  L  K  M  E  G  G  D  S  T  T  D  K  L  V  S  M  L  H  M  K  Y  R  R  I  V  C  L  Y  H  P  *  Y  S  I  S  L  N  S  F  C  S  L  L  *  Y  D  L  R  *  R  E  R  V  S  L  R  L  I  M  L  F  E  S  C  D  V  M  M  F  T  Y  M  *  L  L  Y  N  I  F  P  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19181" stop="19406"/>
                    <exon start="20301" stop="20398"/>
                    <exon start="20491" stop="20595"/>
                    <exon start="20711" stop="20776"/>
                    <exon start="21749" stop="21835"/>
                    <exon start="22641" stop="22691"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>630</number_coding_nucleotides>
                  <number_encoded_amino_acids>210</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSLRGLERKTEMKITALMVLKCNPEGSDPVILANASDVNHFGYFQRSSVKEFIVFVGRTVAKRNPPGQRQSVQHEEYKVHSYNRNGLCALGFMDDHYPVRSAFSLLNQVLDEYLKNFGESWKTAQCDNAQPWPYLNEALAKFQDPAEADKLFKIQRELDETKIILHKTIDSVLERGEKLDSLVEKSSDLSAASQMFYKQAKKTNSCCTIL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="19723" e_stop="20186"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="19723" e_stop="20186" e_length="464"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19723" stop="20186"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U599052" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTGGCAGGTACCTGTATTCAAGGTGCGTGCAAGTGAGCATAGACACCGATCGTTATGAAAAAAGATGCAAGCTTGTGGTCCTATAGGTGCTCCTGATGCTTTGAGTCTTGCATTTTGTGATTTTCTGTTTTCATTTCTCTTTTTCTTTTTTTTGTGTTTTGGGGATGGTTTTGCACAAAAGTTTATCAATAACCTCAAGGTACATGTTACCCTACCCAGAAGCCACTTTTTTGAACTACACGGGGTATGTTGTCCTTGTACAAAAGTAGAAGGATGAATGAAGTGTTGACTAGCTTGGTTGGGAAAATTGTTATGTTTAACGAATTGATCTTTTTCAGTTATATTTCTTGAAGTCTTCACATGCTTACACAAGTAATGTTAATCGGTGTTCTTGATATATATCAACTAGTGTAGGATATAAAAATTTGGTGGATTGGTTCTCAATCACAGCCTCTAGCACAAAG</gDNA_template>
            <first_frame> V  A  G  T  C  I  Q  G  A  C  K  *  A  *  T  P  I  V  M  K  K  D  A  S  L  W  S  Y  R  C  S  *  C  F  E  S  C  I  L  *  F  S  V  F  I  S  L  F  L  F  F  V  F  W  G  W  F  C  T  K  V  Y  Q  *  P  Q  G  T  C  Y  P  T  Q  K  P  L  F  *  T  T  R  G  M  L  S  L  Y  K  S  R  R  M  N  E  V  L  T  S  L  V  G  K  I  V  M  F  N  E  L  I  F  F  S  Y  I  S  *  S  L  H  M  L  T  Q  V  M  L  I  G  V  L  D  I  Y  Q  L  V  *  D  I  K  I  W  W  I  G  S  Q  S  Q  P  L  A  Q   </first_frame>
            <second_frame>  W  Q  V  P  V  F  K  V  R  A  S  E  H  R  H  R  S  L  *  K  K  M  Q  A  C  G  P  I  G  A  P  D  A  L  S  L  A  F  C  D  F  L  F  S  F  L  F  F  F  F  L  C  F  G  D  G  F  A  Q  K  F  I  N  N  L  K  V  H  V  T  L  P  R  S  H  F  F  E  L  H  G  V  C  C  P  C  T  K  V  E  G  *  M  K  C  *  L  A  W  L  G  K  L  L  C  L  T  N  *  S  F  S  V  I  F  L  E  V  F  T  C  L  H  K  *  C  *  S  V  F  L  I  Y  I  N  *  C  R  I  *  K  F  G  G  L  V  L  N  H  S  L  *  H  K  </second_frame>
            <third_frame>   G  R  Y  L  Y  S  R  C  V  Q  V  S  I  D  T  D  R  Y  E  K  R  C  K  L  V  V  L  *  V  L  L  M  L  *  V  L  H  F  V  I  F  C  F  H  F  S  F  S  F  F  C  V  L  G  M  V  L  H  K  S  L  S  I  T  S  R  Y  M  L  P  Y  P  E  A  T  F  L  N  Y  T  G  Y  V  V  L  V  Q  K  *  K  D  E  *  S  V  D  *  L  G  W  E  N  C  Y  V  *  R  I  D  L  F  Q  L  Y  F  L  K  S  S  H  A  Y  T  S  N  V  N  R  C  S  *  Y  I  S  T  S  V  G  Y  K  N  L  V  D  W  F  S  I  T  A  S  S  T  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="+"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19781" stop="19999"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKMQACGPIGAPDALSLAFCDFLFSFLFFFFLCFGDGFAQKFINNLKVHVTLPRSHFFELHGVCCPCTKVEG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="19104" e_stop="19406"/>
            <exon e_start="20301" e_stop="20595"/>
            <exon e_start="20711" e_stop="20753"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.683" e_score="0.997"/>
          <exon-intron don_prob="0.982" acc_prob="0.998" e_score="0.973"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="19104" e_stop="19406" e_length="303"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.683">
            <gDNA_intron_boundary i_start="19407" i_stop="20300" i_length="894"/>
          </intron>
          <exon e_serial="2" e_score="0.973">
            <gDNA_exon_boundary e_start="20301" e_stop="20595" e_length="295"/>
          </exon>
          <intron i_serial="2" don_prob="0.982" acc_prob="0.998">
            <gDNA_intron_boundary i_start="20596" i_stop="20710" i_length="115"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="20711" e_stop="20753" e_length="43"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19104" stop="19406"/>
              <exon start="20301" stop="20595"/>
              <exon start="20711" stop="20753"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596130" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCTTCGAAGGCGGCCATAGAAGAGAGGAAAAAAAAATTCTTTGAAATTTATTTTGGTGTTTTTGGATAATTTTTTGAAGAAGTTTGAGAGGTTTAGAGAGAAAAACAGAGATGAAGATCACAGCTTTGATGGTGTTGAAATGCAATCCAGAAGGTTCGGATCCTGTGATCTTAGCAAACGCTTCTGATGTTAACCATTTTGGGTATTTTCAGAGATCCAGCGTTAAGGAATTTATCGTTTTTGTGGGTCGAACTGTTGCTAAAAGGAACCCACCTGGACAACGACAATCTGTTCAGCATGAAG : AATACAAGGTGCATTCATACAATCGAAATGGTTTATGTGCTTTGGGCTTCATGGATGATCACTATCCAGTTCGAAGTGCATTTTCACTGCTCAACCAGGTATAGGCTCTTTATTATAGATATTCATCTTTGAGAGGAGAAACTCTATATATGGAGAAATCAAATTATGGATCTGCATCTCATTTTTCCAGGTTTTGGATGAGTATCTGAAGAATTTTGGTGAGTCATGGAAGACGGCTCAATGCGACAATGCTCAACCATGGCCTTATCTGAATGAAGCTCTAGCCAAATTTCAG : GATCCTGCTGAGGCCGATAAGCTGTTCAAAATTCAACGAGAGT</gDNA_template>
            <first_frame> P  S  K  A  A  I  E  E  R  K  K  K  F  F  E  I  Y  F  G  V  F  G  *  F  F  E  E  V  *  E  V  *  R  E  K  Q  R  *  R  S  Q  L  *  W  C  *  N  A  I  Q  K  V  R  I  L  *  S  *  Q  T  L  L  M  L  T  I  L  G  I  F  R  D  P  A  L  R  N  L  S  F  L  W  V  E  L  L  L  K  G  T  H  L  D  N  D  N  L  F  S  M  K  :  N  T  R  C  I  H  T  I  E  M  V  Y  V  L  W  A  S  W  M  I  T  I  Q  F  E  V  H  F  H  C  S  T  R  Y  R  L  F  I  I  D  I  H  L  *  E  E  K  L  Y  I  W  R  N  Q  I  M  D  L  H  L  I  F  P  G  F  G  *  V  S  E  E  F  W  *  V  M  E  D  G  S  M  R  Q  C  S  T  M  A  L  S  E  *  S  S  S  Q  I  S   : G  S  C  *  G  R  *  A  V  Q  N  S  T  R   </first_frame>
            <second_frame>  L  R  R  R  P  *  K  R  G  K  K  N  S  L  K  F  I  L  V  F  L  D  N  F  L  K  K  F  E  R  F  R  E  K  N  R  D  E  D  H  S  F  D  G  V  E  M  Q  S  R  R  F  G  S  C  D  L  S  K  R  F  *  C  *  P  F  W  V  F  S  E  I  Q  R  *  G  I  Y  R  F  C  G  S  N  C  C  *  K  E  P  T  W  T  T  T  I  C  S  A  *  R :   I  Q  G  A  F  I  Q  S  K  W  F  M  C  F  G  L  H  G  *  S  L  S  S  S  K  C  I  F  T  A  Q  P  G  I  G  S  L  L  *  I  F  I  F  E  R  R  N  S  I  Y  G  E  I  K  L  W  I  C  I  S  F  F  Q  V  L  D  E  Y  L  K  N  F  G  E  S  W  K  T  A  Q  C  D  N  A  Q  P  W  P  Y  L  N  E  A  L  A  K  F  Q  :  D  P  A  E  A  D  K  L  F  K  I  Q  R  E  </second_frame>
            <third_frame>   F  E  G  G  H  R  R  E  E  K  K  I  L  *  N  L  F  W  C  F  W  I  I  F  *  R  S  L  R  G  L  E  R  K  T  E  M  K  I  T  A  L  M  V  L  K  C  N  P  E  G  S  D  P  V  I  L  A  N  A  S  D  V  N  H  F  G  Y  F  Q  R  S  S  V  K  E  F  I  V  F  V  G  R  T  V  A  K  R  N  P  P  G  Q  R  Q  S  V  Q  H  E   : E  Y  K  V  H  S  Y  N  R  N  G  L  C  A  L  G  F  M  D  D  H  Y  P  V  R  S  A  F  S  L  L  N  Q  V  *  A  L  Y  Y  R  Y  S  S  L  R  G  E  T  L  Y  M  E  K  S  N  Y  G  S  A  S  H  F  S  R  F  W  M  S  I  *  R  I  L  V  S  H  G  R  R  L  N  A  T  M  L  N  H  G  L  I  *  M  K  L  *  P  N  F  R :   I  L  L  R  P  I  S  C  S  K  F  N  E  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="+"/>
                <serials PGL_serial="3" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19181" stop="19406"/>
                    <exon start="20301" stop="20404"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>327</number_coding_nucleotides>
                  <number_encoded_amino_acids>109</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSLRGLERKTEMKITALMVLKCNPEGSDPVILANASDVNHFGYFQRSSVKEFIVFVGRTVAKRNPPGQRQSVQHEEYKVHSYNRNGLCALGFMDDHYPVRSAFSLLNQV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="+"/>
                <serials PGL_serial="3" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19278" stop="19406"/>
                    <exon start="20301" stop="20432"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>258</number_coding_nucleotides>
                  <number_encoded_amino_acids>86</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QTLLMLTILGIFRDPALRNLSFLWVELLLKGTHLDNDNLFSMKNTRCIHTIEMVYVLWASWMITIQFEVHFHCSTRYRLFIIDIHL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="+"/>
                <serials PGL_serial="3" AGS_serial="3" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20419" stop="20595"/>
                    <exon start="20711" stop="20752"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFIFERRNSIYGEIKLWICISFFQVLDEYLKNFGESWKTAQCDNAQPWPYLNEALAKFQDPAEADKLFKIQRE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="32308" PGL_stop="31141"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="32308" e_stop="31866"/>
            <exon e_start="31606" e_stop="31141"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.954" acc_prob="0.976" e_score="0.989"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="32308" e_stop="31866" e_length="443"/>
          </exon>
          <intron i_serial="1" don_prob="0.954" acc_prob="0.976">
            <gDNA_intron_boundary i_start="31865" i_stop="31607" i_length="259"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="31606" e_stop="31141" e_length="466"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32308" stop="31866"/>
              <exon start="31606" stop="31141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U578306" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AACCTTATCAAGAAACCAATTCAAAAGAGACCAAAACCCTTATACTACACTTTGAAATTTTGCAAAAAAATATGACCACAAAAGAGATGGAAGTAGTGAAGAATTTGGATGTTGAAAAATACATGGGAAGATGGTATGAAATTGCCTCATTTCCATCAAGAAATCAACCAAAAGATGGTGTAAACACAAGAGCCACTTACACTTTAAACCAAGATGGAACAGTACATGTGTTAAATGAAACATGGAGTGGTGGTAAAAGAGGTTCAATTGAAGGGACTGCCTATAAAGCTGATCCAAAAAGTGATGAAGCAAAACTTAAAGTGAAATTTTATATCCCACCTTTCTTGCCAATTATTCCTATTGTTGGTGATTATTGGGTTTTATATATTGATGATGATTATCAATATGCTTTGATTGGTCAGCCTAGTAAGAAATATCTTTGG : ATATTATGTAGGCAACCACATCTTGATGAAGAAATATACAACCAACTTGTTGAGAAGGCAAAAGAAGTAGGATATGATGTGAGCAAACTTCACAAGACACCTCAAGCTGATCCTCCACCAGATGGTGAAGATGCCCCAAAGGACACTAAAGGATTTTGGTGGATCAAATCAATATTGGGAAAATAGTCAATCTTGAATATGGTTTTTTTAAACCAATAGCTAAATAAATTTTACAATATAAATTATGAAAAGTTGTCTTGTAAAGAAGAGTTTATTATTGTTTATATTTCAAATGTTGTAATTTTCTAAGGTGTGTCCTTCTTGTGTTGGTAGCAAGTATAGCATGTGTAATATTGTGTTGTTGCAACTTGTAAGAGAGTTTGTTGTTAATTTTACAATATAAATTATGAAATGTTGAATATATATAGTTCGTTTCGTTCAAATGAAGTTTCTTGAATTTTTATAC</gDNA_template>
            <first_frame> N  L  I  K  K  P  I  Q  K  R  P  K  P  L  Y  Y  T  L  K  F  C  K  K  I  *  P  Q  K  R  W  K  *  *  R  I  W  M  L  K  N  T  W  E  D  G  M  K  L  P  H  F  H  Q  E  I  N  Q  K  M  V  *  T  Q  E  P  L  T  L  *  T  K  M  E  Q  Y  M  C  *  M  K  H  G  V  V  V  K  E  V  Q  L  K  G  L  P  I  K  L  I  Q  K  V  M  K  Q  N  L  K  *  N  F  I  S  H  L  S  C  Q  L  F  L  L  L  V  I  I  G  F  Y  I  L  M  M  I  I  N  M  L  *  L  V  S  L  V  R  N  I  F  G :   Y  Y  V  G  N  H  I  L  M  K  K  Y  T  T  N  L  L  R  R  Q  K  K  *  D  M  M  *  A  N  F  T  R  H  L  K  L  I  L  H  Q  M  V  K  M  P  Q  R  T  L  K  D  F  G  G  S  N  Q  Y  W  E  N  S  Q  S  *  I  W  F  F  *  T  N  S  *  I  N  F  T  I  *  I  M  K  S  C  L  V  K  K  S  L  L  L  F  I  F  Q  M  L  *  F  S  K  V  C  P  S  C  V  G  S  K  Y  S  M  C  N  I  V  L  L  Q  L  V  R  E  F  V  V  N  F  T  I  *  I  M  K  C  *  I  Y  I  V  R  F  V  Q  M  K  F  L  E  F  L  Y </first_frame>
            <second_frame>  T  L  S  R  N  Q  F  K  R  D  Q  N  P  Y  T  T  L  *  N  F  A  K  K  Y  D  H  K  R  D  G  S  S  E  E  F  G  C  *  K  I  H  G  K  M  V  *  N  C  L  I  S  I  K  K  S  T  K  R  W  C  K  H  K  S  H  L  H  F  K  P  R  W  N  S  T  C  V  K  *  N  M  E  W  W  *  K  R  F  N  *  R  D  C  L  *  S  *  S  K  K  *  *  S  K  T  *  S  E  I  L  Y  P  T  F  L  A  N  Y  S  Y  C  W  *  L  L  G  F  I  Y  *  *  *  L  S  I  C  F  D  W  S  A  *  *  E  I  S  L   : D  I  M  *  A  T  T  S  *  *  R  N  I  Q  P  T  C  *  E  G  K  R  S  R  I  *  C  E  Q  T  S  Q  D  T  S  S  *  S  S  T  R  W  *  R  C  P  K  G  H  *  R  I  L  V  D  Q  I  N  I  G  K  I  V  N  L  E  Y  G  F  F  K  P  I  A  K  *  I  L  Q  Y  K  L  *  K  V  V  L  *  R  R  V  Y  Y  C  L  Y  F  K  C  C  N  F  L  R  C  V  L  L  V  L  V  A  S  I  A  C  V  I  L  C  C  C  N  L  *  E  S  L  L  L  I  L  Q  Y  K  L  *  N  V  E  Y  I  *  F  V  S  F  K  *  S  F  L  N  F  Y   </second_frame>
            <third_frame>   P  Y  Q  E  T  N  S  K  E  T  K  T  L  I  L  H  F  E  I  L  Q  K  N  M  T  T  K  E  M  E  V  V  K  N  L  D  V  E  K  Y  M  G  R  W  Y  E  I  A  S  F  P  S  R  N  Q  P  K  D  G  V  N  T  R  A  T  Y  T  L  N  Q  D  G  T  V  H  V  L  N  E  T  W  S  G  G  K  R  G  S  I  E  G  T  A  Y  K  A  D  P  K  S  D  E  A  K  L  K  V  K  F  Y  I  P  P  F  L  P  I  I  P  I  V  G  D  Y  W  V  L  Y  I  D  D  D  Y  Q  Y  A  L  I  G  Q  P  S  K  K  Y  L  W  :  I  L  C  R  Q  P  H  L  D  E  E  I  Y  N  Q  L  V  E  K  A  K  E  V  G  Y  D  V  S  K  L  H  K  T  P  Q  A  D  P  P  P  D  G  E  D  A  P  K  D  T  K  G  F  W  W  I  K  S  I  L  G  K  *  S  I  L  N  M  V  F  L  N  Q  *  L  N  K  F  Y  N  I  N  Y  E  K  L  S  C  K  E  E  F  I  I  V  Y  I  S  N  V  V  I  F  *  G  V  S  F  L  C  W  *  Q  V  *  H  V  *  Y  C  V  V  A  T  C  K  R  V  C  C  *  F  Y  N  I  N  Y  E  M  L  N  I  Y  S  S  F  R  S  N  E  V  S  *  I  F  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="32306" stop="31866"/>
                    <exon start="31606" stop="31421"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>624</number_coding_nucleotides>
                  <number_encoded_amino_acids>208</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PYQETNSKETKTLILHFEILQKNMTTKEMEVVKNLDVEKYMGRWYEIASFPSRNQPKDGVNTRATYTLNQDGTVHVLNETWSGGKRGSIEGTAYKADPKSDEAKLKVKFYIPPFLPIIPIVGDYWVLYIDDDYQYALIGQPSKKYLWILCRQPHLDEEIYNQLVEKAKEVGYDVSKLHKTPQADPPPDGEDAPKDTKGFWWIKSILGK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="33200" PGL_stop="32426"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="33200" e_stop="32426"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="33200" e_stop="32426" e_length="775"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33200" stop="32426"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U573488" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTGGGACTTGAGATCAGCTATATTTCAATATTCTATATTTTGAGTTCTCTAATGCTAGGTGAAATGCGTGTAGTTCCAGTTTAATAAAGAAAGAGCTGTATTCTAAAAATGAAATATATCAAGTGTACCATTTAAGTTGATTTACCAGTATTTACTAAAAATAATAATCTCAGAATGTCTTAAGTTAACAATCACCTTCTAGAATAATTTTGTATTCTAGGATGTGTATTATTAAAAGAAAGAAATTACCATTAAAATGAAAAAATAATTTAAACAGCCCACTGTATTATATTGAACAGAATTCTAGAACCTGCCATTGAACAATCTGCCAAAAAAGGTCAATCATTACACTTGTAAGGTGCTTGAATGTCCACGTCTATATCCACAAATATTTCACAGCACACAATATCTCCTCATCCCAATAAACCTTATCAAGAATTCAATCTCTGAAAGAACAAAAAAACTTAAAATCCTGTATTGTTTGTTTGTTTGATTTTAGTTTGAAATAAAATCTAAAAAAGCAAAAAAAGTTGTCAATTTTGTGAATTTAAAATATGTAAAATATTATTATCTACTCTCATAATTTTAAAAATATTACATGGAAAGTATTATCTTTTAAGTAAATTATTTTTGTTAGGAGTAAGATAAGGAAAAAATGGGGAATTAAATTTTAACGAATAAGATAAAAGCTCAAATAATCAATCAACTGACACCAAAAAAAGGATACTTCTATTTTAAAACAAATTAAAAAGAAAAATATTACAAATAAATTTTG</gDNA_template>
            <first_frame> L  G  L  E  I  S  Y  I  S  I  F  Y  I  L  S  S  L  M  L  G  E  M  R  V  V  P  V  *  *  R  K  S  C  I  L  K  M  K  Y  I  K  C  T  I  *  V  D  L  P  V  F  T  K  N  N  N  L  R  M  S  *  V  N  N  H  L  L  E  *  F  C  I  L  G  C  V  L  L  K  E  R  N  Y  H  *  N  E  K  I  I  *  T  A  H  C  I  I  L  N  R  I  L  E  P  A  I  E  Q  S  A  K  K  G  Q  S  L  H  L  *  G  A  *  M  S  T  S  I  S  T  N  I  S  Q  H  T  I  S  P  H  P  N  K  P  Y  Q  E  F  N  L  *  K  N  K  K  T  *  N  P  V  L  F  V  C  L  I  L  V  *  N  K  I  *  K  S  K  K  S  C  Q  F  C  E  F  K  I  C  K  I  L  L  S  T  L  I  I  L  K  I  L  H  G  K  Y  Y  L  L  S  K  L  F  L  L  G  V  R  *  G  K  N  G  E  L  N  F  N  E  *  D  K  S  S  N  N  Q  S  T  D  T  K  K  R  I  L  L  F  *  N  K  L  K  R  K  I  L  Q  I  N  F  </first_frame>
            <second_frame>  W  D  L  R  S  A  I  F  Q  Y  S  I  F  *  V  L  *  C  *  V  K  C  V  *  F  Q  F  N  K  E  R  A  V  F  *  K  *  N  I  S  S  V  P  F  K  L  I  Y  Q  Y  L  L  K  I  I  I  S  E  C  L  K  L  T  I  T  F  *  N  N  F  V  F  *  D  V  Y  Y  *  K  K  E  I  T  I  K  M  K  K  *  F  K  Q  P  T  V  L  Y  *  T  E  F  *  N  L  P  L  N  N  L  P  K  K  V  N  H  Y  T  C  K  V  L  E  C  P  R  L  Y  P  Q  I  F  H  S  T  Q  Y  L  L  I  P  I  N  L  I  K  N  S  I  S  E  R  T  K  K  L  K  I  L  Y  C  L  F  V  *  F  *  F  E  I  K  S  K  K  A  K  K  V  V  N  F  V  N  L  K  Y  V  K  Y  Y  Y  L  L  S  *  F  *  K  Y  Y  M  E  S  I  I  F  *  V  N  Y  F  C  *  E  *  D  K  E  K  M  G  N  *  I  L  T  N  K  I  K  A  Q  I  I  N  Q  L  T  P  K  K  G  Y  F  Y  F  K  T  N  *  K  E  K  Y  Y  K  *  I  L </second_frame>
            <third_frame>   G  T  *  D  Q  L  Y  F  N  I  L  Y  F  E  F  S  N  A  R  *  N  A  C  S  S  S  L  I  K  K  E  L  Y  S  K  N  E  I  Y  Q  V  Y  H  L  S  *  F  T  S  I  Y  *  K  *  *  S  Q  N  V  L  S  *  Q  S  P  S  R  I  I  L  Y  S  R  M  C  I  I  K  R  K  K  L  P  L  K  *  K  N  N  L  N  S  P  L  Y  Y  I  E  Q  N  S  R  T  C  H  *  T  I  C  Q  K  R  S  I  I  T  L  V  R  C  L  N  V  H  V  Y  I  H  K  Y  F  T  A  H  N  I  S  S  S  Q  *  T  L  S  R  I  Q  S  L  K  E  Q  K  N  L  K  S  C  I  V  C  L  F  D  F  S  L  K  *  N  L  K  K  Q  K  K  L  S  I  L  *  I  *  N  M  *  N  I  I  I  Y  S  H  N  F  K  N  I  T  W  K  V  L  S  F  K  *  I  I  F  V  R  S  K  I  R  K  K  W  G  I  K  F  *  R  I  R  *  K  L  K  *  S  I  N  *  H  Q  K  K  D  T  S  I  L  K  Q  I  K  K  K  N  I  T  N  K  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0002D20.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="38012" PGL_stop="37300"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="38012" e_stop="37300"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.972"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.972">
            <gDNA_exon_boundary e_start="38012" e_stop="37300" e_length="713"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38012" stop="37300"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U594425" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAGGCGATGATGATTTTTGCCAATTTTTATTCCCTTCTGTGCTGATTAATTGGGCATTTGAGGTTATCTGACCCGTATCTTGGCGGGGCATGCTCCCAGATTTTCTGGTGGTTTTTGCAGCCATGGCGTGGTTGGACTCTCTTGTTGCCCAAGCTTAACAGATCTGAGTCTCAATTTTTCTCTAATCTGCTTGGGCTCTTTTTTCGCCGCCTAACGTTAAGGGTTTGTTTGGTATGAAGGAAGTTTTCGTGAGTTGAGAAACAAAAAGCAAAAAGCTCAGAAGGGAAAGTGAGGCTACAGAGAGTTGAAGATTTTTCATTGAAAGGGTGGTTGCCTCTCTAAACATTCAGCCAATGATTTCTCCATTACTGTCAGGATCCCAACTCTGAGCTGATTATTCGGGCATTTGAGGTTATCCAACCCGTATCTTGGCAGGGCGTGCCACCAGATTTTCTGGTGGTTTTTGCAGCCATGGCGTTATTGGACTTTCTTTTTGCCTGAGCTCAATACAGATCTGAGCCTCACTTTCTCTGTCAGTTTAGGGAAACAAAAGGTTAGGAAAATGAACACAGGAAAAGCTTTAAAGGGATAGATTGAGGCTATAGAGAGTTGAGGACTTCTCATTGAATGGGTGATTGCCTCGCTCTATATTCAGCCAATGATTTCTCCATTAAGGTAAATAGCCCAATTATCCTTCTATCAATTTTAATGAA</gDNA_template>
            <first_frame> E  A  M  M  I  F  A  N  F  Y  S  L  L  C  *  L  I  G  H  L  R  L  S  D  P  Y  L  G  G  A  C  S  Q  I  F  W  W  F  L  Q  P  W  R  G  W  T  L  L  L  P  K  L  N  R  S  E  S  Q  F  F  S  N  L  L  G  L  F  F  R  R  L  T  L  R  V  C  L  V  *  R  K  F  S  *  V  E  K  Q  K  A  K  S  S  E  G  K  V  R  L  Q  R  V  E  D  F  S  L  K  G  W  L  P  L  *  T  F  S  Q  *  F  L  H  Y  C  Q  D  P  N  S  E  L  I  I  R  A  F  E  V  I  Q  P  V  S  W  Q  G  V  P  P  D  F  L  V  V  F  A  A  M  A  L  L  D  F  L  F  A  *  A  Q  Y  R  S  E  P  H  F  L  C  Q  F  R  E  T  K  G  *  E  N  E  H  R  K  S  F  K  G  I  D  *  G  Y  R  E  L  R  T  S  H  *  M  G  D  C  L  A  L  Y  S  A  N  D  F  S  I  K  V  N  S  P  I  I  L  L  S  I  L  M   </first_frame>
            <second_frame>  R  R  *  *  F  L  P  I  F  I  P  F  C  A  D  *  L  G  I  *  G  Y  L  T  R  I  L  A  G  H  A  P  R  F  S  G  G  F  C  S  H  G  V  V  G  L  S  C  C  P  S  L  T  D  L  S  L  N  F  S  L  I  C  L  G  S  F  F  A  A  *  R  *  G  F  V  W  Y  E  G  S  F  R  E  L  R  N  K  K  Q  K  A  Q  K  G  K  *  G  Y  R  E  L  K  I  F  H  *  K  G  G  C  L  S  K  H  S  A  N  D  F  S  I  T  V  R  I  P  T  L  S  *  L  F  G  H  L  R  L  S  N  P  Y  L  G  R  A  C  H  Q  I  F  W  W  F  L  Q  P  W  R  Y  W  T  F  F  L  P  E  L  N  T  D  L  S  L  T  F  S  V  S  L  G  K  Q  K  V  R  K  M  N  T  G  K  A  L  K  G  *  I  E  A  I  E  S  *  G  L  L  I  E  W  V  I  A  S  L  Y  I  Q  P  M  I  S  P  L  R  *  I  A  Q  L  S  F  Y  Q  F  *  *  </second_frame>
            <third_frame>   G  D  D  D  F  C  Q  F  L  F  P  S  V  L  I  N  W  A  F  E  V  I  *  P  V  S  W  R  G  M  L  P  D  F  L  V  V  F  A  A  M  A  W  L  D  S  L  V  A  Q  A  *  Q  I  *  V  S  I  F  L  *  S  A  W  A  L  F  S  P  P  N  V  K  G  L  F  G  M  K  E  V  F  V  S  *  E  T  K  S  K  K  L  R  R  E  S  E  A  T  E  S  *  R  F  F  I  E  R  V  V  A  S  L  N  I  Q  P  M  I  S  P  L  L  S  G  S  Q  L  *  A  D  Y  S  G  I  *  G  Y  P  T  R  I  L  A  G  R  A  T  R  F  S  G  G  F  C  S  H  G  V  I  G  L  S  F  C  L  S  S  I  Q  I  *  A  S  L  S  L  S  V  *  G  N  K  R  L  G  K  *  T  Q  E  K  L  *  R  D  R  L  R  L  *  R  V  E  D  F  S  L  N  G  *  L  P  R  S  I  F  S  Q  *  F  L  H  *  G  K  *  P  N  Y  P  S  I  N  F  N  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="37618" stop="37421"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LFGHLRLSNPYLGRACHQIFWWFLQPWRYWTFFLPELNTDLSLTFSVSLGKQKVRKMNTGKALKG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="42023" PGL_stop="40654"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="42023" e_stop="40654"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="42023" e_stop="40654" e_length="1370"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42023" stop="40654"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U566024" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTTATGAATACATCCCACCCATGGCTTAGAGGCTTTGGTCCAGCAGCATTAGTACAACAATTGTTGTGTAATAGGGGTGCATGTTGCCAGTTTGAAATATCCCTTTTGTTTAGGGATAAGAGTGCAACAGTTGGTGAGTACGATGCATGCCACAGATTTGAATTATGAAGCTTGGTATCTAAGCAGAGAAAGACAGATGGCCGGTGCAACATAGAGATTCAAACAAAAGTGAAATCTCTCTACTGTTTTTTGCTGATAATGTTCACAACTTCTATAGCCAAGTGAGACCATATGTAAAGTTGGAAAAATTGGTATAAAAGTAACCTATTTGGAGTTAGAGAAAAGTTGTTTTTGATATAATTTGCAAAAAGAGAACAATGAAAGTGAAGGTAAAATGTTGAAGATAATATGACAAACTAAAAAAGGAACAATCAGTATCAAAATTATACAATGAAGTGCAAGAAATATTAAAAGGGATGGAACAAACAGAAACTTCATGGAAATTTGATTATCCATCATCATACCTTCGCATCGGAACACCTGTACATCTCATTTTCACATATTCGAACTATATTCGAACTATCTTGACTGAGAAAATTATATTAAAAAGAATCTAAAAATTGTAAATGCAAATCTCTGTGTCCTAAAGAAATTGTTATTTTATACTTTCAACAAGATTAAAGTTGATTTTTTTAATGAAGATACTGTTCCTCTGGTAAAGATGGGAGTATTTTAGTTCAAGTGTTGGGTACTATATAAGCAAAACCTTAGGGCAATGGACAAAGCAAAAAGCTCAAAAGGGAAAGAATGAGGCTTAAAGAGAGTTTAAGGATTTCTCATTGAAAGGGTGGTTGCCACTCTCTACATCAGCCGATGATTTCTCCATTTATCTAAGAATTCCAACAACCTTTTTCTTATCAATTTTGAACAGAGGAAATATACAATTATCAGCTTTGTTTGAAATGGGTTTCTATGGCCTTTCAACTCTTTTTCCCTTTTTATTTCTTTATACTTATGCTTATGCCTGAGCATTCAGTGTTGCCGGTGGGGGTGATTATAATTGGTGTCTTTATAGAGGCGATGATGATTTTTGTCCCTTTTTATTCCCTTTTGAGCTGATTAATTGAGCATTTGAGGTTATCTGATCCGTAACTTGGCGGGGCATACTTTTTTTTGCAGCCATGGCGTGGTTGGACTCTCTTTTTGCTCGAGCTTAACACAGATCTGAGCCTCAATTTGCTGGTCTCTTCATCAATTTCAATTGAGGGAGTATTATTAACAGCTTCAGGGTACTATAAGCTATTATTCATAAATTAAAAATGAGGCTAACATGGATTTTGAGGATTTTTATGTTGAAAGGGTGGTTGAG</gDNA_template>
            <first_frame> F  Y  E  Y  I  P  P  M  A  *  R  L  W  S  S  S  I  S  T  T  I  V  V  *  *  G  C  M  L  P  V  *  N  I  P  F  V  *  G  *  E  C  N  S  W  *  V  R  C  M  P  Q  I  *  I  M  K  L  G  I  *  A  E  K  D  R  W  P  V  Q  H  R  D  S  N  K  S  E  I  S  L  L  F  F  A  D  N  V  H  N  F  Y  S  Q  V  R  P  Y  V  K  L  E  K  L  V  *  K  *  P  I  W  S  *  R  K  V  V  F  D  I  I  C  K  K  R  T  M  K  V  K  V  K  C  *  R  *  Y  D  K  L  K  K  E  Q  S  V  S  K  L  Y  N  E  V  Q  E  I  L  K  G  M  E  Q  T  E  T  S  W  K  F  D  Y  P  S  S  Y  L  R  I  G  T  P  V  H  L  I  F  T  Y  S  N  Y  I  R  T  I  L  T  E  K  I  I  L  K  R  I  *  K  L  *  M  Q  I  S  V  S  *  R  N  C  Y  F  I  L  S  T  R  L  K  L  I  F  L  M  K  I  L  F  L  W  *  R  W  E  Y  F  S  S  S  V  G  Y  Y  I  S  K  T  L  G  Q  W  T  K  Q  K  A  Q  K  G  K  N  E  A  *  R  E  F  K  D  F  S  L  K  G  W  L  P  L  S  T  S  A  D  D  F  S  I  Y  L  R  I  P  T  T  F  F  L  S  I  L  N  R  G  N  I  Q  L  S  A  L  F  E  M  G  F  Y  G  L  S  T  L  F  P  F  L  F  L  Y  T  Y  A  Y  A  *  A  F  S  V  A  G  G  G  D  Y  N  W  C  L  Y  R  G  D  D  D  F  C  P  F  L  F  P  F  E  L  I  N  *  A  F  E  V  I  *  S  V  T  W  R  G  I  L  F  F  A  A  M  A  W  L  D  S  L  F  A  R  A  *  H  R  S  E  P  Q  F  A  G  L  F  I  N  F  N  *  G  S  I  I  N  S  F  R  V  L  *  A  I  I  H  K  L  K  M  R  L  T  W  I  L  R  I  F  M  L  K  G  W  L   </first_frame>
            <second_frame>  F  M  N  T  S  H  P  W  L  R  G  F  G  P  A  A  L  V  Q  Q  L  L  C  N  R  G  A  C  C  Q  F  E  I  S  L  L  F  R  D  K  S  A  T  V  G  E  Y  D  A  C  H  R  F  E  L  *  S  L  V  S  K  Q  R  K  T  D  G  R  C  N  I  E  I  Q  T  K  V  K  S  L  Y  C  F  L  L  I  M  F  T  T  S  I  A  K  *  D  H  M  *  S  W  K  N  W  Y  K  S  N  L  F  G  V  R  E  K  L  F  L  I  *  F  A  K  R  E  Q  *  K  *  R  *  N  V  E  D  N  M  T  N  *  K  R  N  N  Q  Y  Q  N  Y  T  M  K  C  K  K  Y  *  K  G  W  N  K  Q  K  L  H  G  N  L  I  I  H  H  H  T  F  A  S  E  H  L  Y  I  S  F  S  H  I  R  T  I  F  E  L  S  *  L  R  K  L  Y  *  K  E  S  K  N  C  K  C  K  S  L  C  P  K  E  I  V  I  L  Y  F  Q  Q  D  *  S  *  F  F  *  *  R  Y  C  S  S  G  K  D  G  S  I  L  V  Q  V  L  G  T  I  *  A  K  P  *  G  N  G  Q  S  K  K  L  K  R  E  R  M  R  L  K  E  S  L  R  I  S  H  *  K  G  G  C  H  S  L  H  Q  P  M  I  S  P  F  I  *  E  F  Q  Q  P  F  S  Y  Q  F  *  T  E  E  I  Y  N  Y  Q  L  C  L  K  W  V  S  M  A  F  Q  L  F  F  P  F  Y  F  F  I  L  M  L  M  P  E  H  S  V  L  P  V  G  V  I  I  I  G  V  F  I  E  A  M  M  I  F  V  P  F  Y  S  L  L  S  *  L  I  E  H  L  R  L  S  D  P  *  L  G  G  A  Y  F  F  L  Q  P  W  R  G  W  T  L  F  L  L  E  L  N  T  D  L  S  L  N  L  L  V  S  S  S  I  S  I  E  G  V  L  L  T  A  S  G  Y  Y  K  L  L  F  I  N  *  K  *  G  *  H  G  F  *  G  F  L  C  *  K  G  G  *  </second_frame>
            <third_frame>   L  *  I  H  P  T  H  G  L  E  A  L  V  Q  Q  H  *  Y  N  N  C  C  V  I  G  V  H  V  A  S  L  K  Y  P  F  C  L  G  I  R  V  Q  Q  L  V  S  T  M  H  A  T  D  L  N  Y  E  A  W  Y  L  S  R  E  R  Q  M  A  G  A  T  *  R  F  K  Q  K  *  N  L  S  T  V  F  C  *  *  C  S  Q  L  L  *  P  S  E  T  I  C  K  V  G  K  I  G  I  K  V  T  Y  L  E  L  E  K  S  C  F  *  Y  N  L  Q  K  E  N  N  E  S  E  G  K  M  L  K  I  I  *  Q  T  K  K  G  T  I  S  I  K  I  I  Q  *  S  A  R  N  I  K  R  D  G  T  N  R  N  F  M  E  I  *  L  S  I  I  I  P  S  H  R  N  T  C  T  S  H  F  H  I  F  E  L  Y  S  N  Y  L  D  *  E  N  Y  I  K  K  N  L  K  I  V  N  A  N  L  C  V  L  K  K  L  L  F  Y  T  F  N  K  I  K  V  D  F  F  N  E  D  T  V  P  L  V  K  M  G  V  F  *  F  K  C  W  V  L  Y  K  Q  N  L  R  A  M  D  K  A  K  S  S  K  G  K  E  *  G  L  K  R  V  *  G  F  L  I  E  R  V  V  A  T  L  Y  I  S  R  *  F  L  H  L  S  K  N  S  N  N  L  F  L  I  N  F  E  Q  R  K  Y  T  I  I  S  F  V  *  N  G  F  L  W  P  F  N  S  F  S  L  F  I  S  L  Y  L  C  L  C  L  S  I  Q  C  C  R  W  G  *  L  *  L  V  S  L  *  R  R  *  *  F  L  S  L  F  I  P  F  *  A  D  *  L  S  I  *  G  Y  L  I  R  N  L  A  G  H  T  F  F  C  S  H  G  V  V  G  L  S  F  C  S  S  L  T  Q  I  *  A  S  I  C  W  S  L  H  Q  F  Q  L  R  E  Y  Y  *  Q  L  Q  G  T  I  S  Y  Y  S  *  I  K  N  E  A  N  M  D  F  E  D  F  Y  V  E  R  V  V  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="41615" stop="41406"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YDKLKKEQSVSKLYNEVQEILKGMEQTETSWKFDYPSSYLRIGTPVHLIFTYSNYIRTILTEKIILKRI*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="41204" stop="40995"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>REFKDFSLKGWLPLSTSADDFSIYLRIPTTFFLSILNRGNIQLSALFEMGFYGLSTLFPFLFLYTYAYA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="47752" PGL_stop="44886"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="47752" e_stop="47605"/>
            <exon e_start="47515" e_stop="47458"/>
            <exon e_start="46480" e_stop="46372"/>
            <exon e_start="46213" e_stop="46069"/>
            <exon e_start="45338" e_stop="45287"/>
            <exon e_start="45201" e_stop="45055"/>
            <exon e_start="44960" e_stop="44886"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.994" e_score="0.966"/>
          <exon-intron don_prob="0.839" acc_prob="0.265" e_score="0.983"/>
          <exon-intron don_prob="0.000" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.969" acc_prob="0.991" e_score="0.993"/>
          <exon-intron don_prob="0.949" acc_prob="0.994" e_score="0.981"/>
          <exon-intron don_prob="0.857" acc_prob="0.968" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.966">
            <gDNA_exon_boundary e_start="47752" e_stop="47605" e_length="148"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.994">
            <gDNA_intron_boundary i_start="47604" i_stop="47516" i_length="89"/>
          </intron>
          <exon e_serial="2" e_score="0.983">
            <gDNA_exon_boundary e_start="47515" e_stop="47458" e_length="58"/>
          </exon>
          <intron i_serial="2" don_prob="0.839" acc_prob="0.265">
            <gDNA_intron_boundary i_start="47457" i_stop="46481" i_length="977"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="46480" e_stop="46372" e_length="109"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.981">
            <gDNA_intron_boundary i_start="46371" i_stop="46214" i_length="158"/>
          </intron>
          <exon e_serial="4" e_score="0.993">
            <gDNA_exon_boundary e_start="46213" e_stop="46069" e_length="145"/>
          </exon>
          <intron i_serial="4" don_prob="0.969" acc_prob="0.991">
            <gDNA_intron_boundary i_start="46068" i_stop="45339" i_length="730"/>
          </intron>
          <exon e_serial="5" e_score="0.981">
            <gDNA_exon_boundary e_start="45338" e_stop="45287" e_length="52"/>
          </exon>
          <intron i_serial="5" don_prob="0.949" acc_prob="0.994">
            <gDNA_intron_boundary i_start="45286" i_stop="45202" i_length="85"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="45201" e_stop="45055" e_length="147"/>
          </exon>
          <intron i_serial="6" don_prob="0.857" acc_prob="0.968">
            <gDNA_intron_boundary i_start="45054" i_stop="44961" i_length="94"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="44960" e_stop="44886" e_length="75"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47752" stop="47605"/>
              <exon start="47515" stop="47458"/>
              <exon start="46480" stop="46372"/>
              <exon start="46213" stop="46069"/>
              <exon start="45338" stop="45287"/>
              <exon start="45201" stop="45055"/>
              <exon start="44960" stop="44886"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U582569" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGGCGCTTATAACCCAAAACCCATTTTTATTTTCAACAAAATTATCACAAAGTCGTGGCTTTTTACACTCTTTTCACAAAAGGGTGTCTTTTTCTTCTTCATTCTTGTCTGTCAGATGTTTTTCTGCTGTTTCACAAAAGCCTCTCAG : ATATGCTGTTCTTGGTGCTGGATTTGCTGGATTGTCTGTGGTTTGGCATTTGTTGCAA : CAAACTTCAGAGGAATCAAATTTTTGCATAGACATATATGATGAAGTTGGCATTGGTGGAGGTGCATCTGGAATGTCTGGTGGACTCCTTCATCCCTATTCCCCCAAAG : TTAAGCTTCTGTGGCGGGGAGAAGAGTGCTGGAAAGAAAGTTTAAAGCTTCTAAATGTTGCTGAAGATGCTCGATCTTCCAAGTCCTTAGACATGGTTATGCCTAAAACTGGGCTAAAAGAAGGTGACTTTATAGTCAGGAGAAG : CGGAATCGTGAGACCGGTGCTCTCTGCGAAAAATATGCGCATGATGAATGAT : AATGCTCAAAACTGCATTGCCAGCTGCAGAATTGAGTCGATCCACAAGGATGCTGCACAAAAGCTTGTACCTGAATTGTGTGTGCCCCTGGACTTAGCCTTCCATATGCCTGAAGCCGTGAATGTTAATCCTCAGAATTATCTTGAG : GCTCTCTACTTAGCATGCAAAACTTTTGTGAAATCCAAGTGCAGTTTTGGCATTTCATGTAAAGAGTTAAATTTG</gDNA_template>
            <first_frame> W  R  L  *  P  K  T  H  F  Y  F  Q  Q  N  Y  H  K  V  V  A  F  Y  T  L  F  T  K  G  C  L  F  L  L  H  S  C  L  S  D  V  F  L  L  F  H  K  S  L  S   : D  M  L  F  L  V  L  D  L  L  D  C  L  W  F  G  I  C  C  N :   K  L  Q  R  N  Q  I  F  A  *  T  Y  M  M  K  L  A  L  V  E  V  H  L  E  C  L  V  D  S  F  I  P  I  P  P  K  :  L  S  F  C  G  G  E  K  S  A  G  K  K  V  *  S  F  *  M  L  L  K  M  L  D  L  P  S  P  *  T  W  L  C  L  K  L  G  *  K  K  V  T  L  *  S  G  E   : A  E  S  *  D  R  C  S  L  R  K  I  C  A  *  *  M  I :   M  L  K  T  A  L  P  A  A  E  L  S  R  S  T  R  M  L  H  K  S  L  Y  L  N  C  V  C  P  W  T  *  P  S  I  C  L  K  P  *  M  L  I  L  R  I  I  L  R :   L  S  T  *  H  A  K  L  L  *  N  P  S  A  V  L  A  F  H  V  K  S  *  I   </first_frame>
            <second_frame>  G  A  Y  N  P  K  P  I  F  I  F  N  K  I  I  T  K  S  W  L  F  T  L  F  S  Q  K  G  V  F  F  F  F  I  L  V  C  Q  M  F  F  C  C  F  T  K  A  S  Q  :  I  C  C  S  W  C  W  I  C  W  I  V  C  G  L  A  F  V  A   : T  N  F  R  G  I  K  F  L  H  R  H  I  *  *  S  W  H  W  W  R  C  I  W  N  V  W  W  T  P  S  S  L  F  P  Q  S :   *  A  S  V  A  G  R  R  V  L  E  R  K  F  K  A  S  K  C  C  *  R  C  S  I  F  Q  V  L  R  H  G  Y  A  *  N  W  A  K  R  R  *  L  Y  S  Q  E  K  :  R  N  R  E  T  G  A  L  C  E  K  Y  A  H  D  E  *   : *  C  S  K  L  H  C  Q  L  Q  N  *  V  D  P  Q  G  C  C  T  K  A  C  T  *  I  V  C  A  P  G  L  S  L  P  Y  A  *  S  R  E  C  *  S  S  E  L  S  *   : G  S  L  L  S  M  Q  N  F  C  E  I  Q  V  Q  F  W  H  F  M  *  R  V  K  F  </second_frame>
            <third_frame>   A  L  I  T  Q  N  P  F  L  F  S  T  K  L  S  Q  S  R  G  F  L  H  S  F  H  K  R  V  S  F  S  S  S  F  L  S  V  R  C  F  S  A  V  S  Q  K  P  L  R :   Y  A  V  L  G  A  G  F  A  G  L  S  V  V  W  H  L  L  Q  :  Q  T  S  E  E  S  N  F  C  I  D  I  Y  D  E  V  G  I  G  G  G  A  S  G  M  S  G  G  L  L  H  P  Y  S  P  K   : V  K  L  L  W  R  G  E  E  C  W  K  E  S  L  K  L  L  N  V  A  E  D  A  R  S  S  K  S  L  D  M  V  M  P  K  T  G  L  K  E  G  D  F  I  V  R  R  S :   G  I  V  R  P  V  L  S  A  K  N  M  R  M  M  N  D  :  N  A  Q  N  C  I  A  S  C  R  I  E  S  I  H  K  D  A  A  Q  K  L  V  P  E  L  C  V  P  L  D  L  A  F  H  M  P  E  A  V  N  V  N  P  Q  N  Y  L  E  :  A  L  Y  L  A  C  K  T  F  V  K  S  K  C  S  F  G  I  S  C  K  E  L  N  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="47750" stop="47605"/>
                    <exon start="47515" stop="47458"/>
                    <exon start="46480" stop="46372"/>
                    <exon start="46213" stop="46069"/>
                    <exon start="45338" stop="45287"/>
                    <exon start="45201" stop="45055"/>
                    <exon start="44960" stop="44886"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>732</number_coding_nucleotides>
                  <number_encoded_amino_acids>244</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ALITQNPFLFSTKLSQSRGFLHSFHKRVSFSSSFLSVRCFSAVSQKPLRYAVLGAGFAGLSVVWHLLQQTSEESNFCIDIYDEVGIGGGASGMSGGLLHPYSPKVKLLWRGEECWKESLKLLNVAEDARSSKSLDMVMPKTGLKEGDFIVRRSGIVRPVLSAKNMRMMNDNAQNCIASCRIESIHKDAAQKLVPELCVPLDLAFHMPEAVNVNPQNYLEALYLACKTFVKSKCSFGISCKELNL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="48943" PGL_stop="49523"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="48943" e_stop="49523"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.964"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.964">
            <gDNA_exon_boundary e_start="48943" e_stop="49523" e_length="581"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48943" stop="49523"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U599035" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGATGGAAAAAAGACTTGGAAACCCATTTACTTCCTCTGTTTAGTGAGAGGTTTGTTGGGATTCTTACAATAATGGAGAAATCATTGACTGGATGAATGCAGAGAGAGGCAACCACCCTTTCAACGAAAATCCCTGTTAGCCTCATTCTTATAGTACCCTGAGGCTGGTAATACTACCCCTCAGTTTAAATTGACGAAGAGAAGCTCAGATCTGTGTTGAACAAGAGTATAAAGAGAGTCCAACCACGCCATGGCTGCAAAAACCAGCATGCCCCGCCAAGATACAGGTCGGATAACCTCCAATGCTCAATTAATCAGCTCAGAAGGGAATAAAAGTTACAAAAATCATCATCGCCTCTTCCTAGCCATCCGAAGCAATAAAATCAACTGTTAGAGGAAATATAATTGAAGAAGAAGATGGATTTAAGGCGTGAAGAATCGCTTTCCTTAAAAGAGATATTGCACGTGTACATATTGGGAAAATACTAGCAACTGCCTTCAAGATACAACAAAGTCCTTATATATACATGCATATTTTTCTCTTTGGCCTACTTCTGGAGAGTGTTTATATTTATAAACCT</gDNA_template>
            <first_frame> R  W  K  K  D  L  E  T  H  L  L  P  L  F  S  E  R  F  V  G  I  L  T  I  M  E  K  S  L  T  G  *  M  Q  R  E  A  T  T  L  S  T  K  I  P  V  S  L  I  L  I  V  P  *  G  W  *  Y  Y  P  S  V  *  I  D  E  E  K  L  R  S  V  L  N  K  S  I  K  R  V  Q  P  R  H  G  C  K  N  Q  H  A  P  P  R  Y  R  S  D  N  L  Q  C  S  I  N  Q  L  R  R  E  *  K  L  Q  K  S  S  S  P  L  P  S  H  P  K  Q  *  N  Q  L  L  E  E  I  *  L  K  K  K  M  D  L  R  R  E  E  S  L  S  L  K  E  I  L  H  V  Y  I  L  G  K  Y  *  Q  L  P  S  R  Y  N  K  V  L  I  Y  T  C  I  F  F  S  L  A  Y  F  W  R  V  F  I  F  I  N   </first_frame>
            <second_frame>  D  G  K  K  T  W  K  P  I  Y  F  L  C  L  V  R  G  L  L  G  F  L  Q  *  W  R  N  H  *  L  D  E  C  R  E  R  Q  P  P  F  Q  R  K  S  L  L  A  S  F  L  *  Y  P  E  A  G  N  T  T  P  Q  F  K  L  T  K  R  S  S  D  L  C  *  T  R  V  *  R  E  S  N  H  A  M  A  A  K  T  S  M  P  R  Q  D  T  G  R  I  T  S  N  A  Q  L  I  S  S  E  G  N  K  S  Y  K  N  H  H  R  L  F  L  A  I  R  S  N  K  I  N  C  *  R  K  Y  N  *  R  R  R  W  I  *  G  V  K  N  R  F  P  *  K  R  Y  C  T  C  T  Y  W  E  N  T  S  N  C  L  Q  D  T  T  K  S  L  Y  I  H  A  Y  F  S  L  W  P  T  S  G  E  C  L  Y  L  *  T  </second_frame>
            <third_frame>   M  E  K  R  L  G  N  P  F  T  S  S  V  *  *  E  V  C  W  D  S  Y  N  N  G  E  I  I  D  W  M  N  A  E  R  G  N  H  P  F  N  E  N  P  C  *  P  H  S  Y  S  T  L  R  L  V  I  L  P  L  S  L  N  *  R  R  E  A  Q  I  C  V  E  Q  E  Y  K  E  S  P  T  T  P  W  L  Q  K  P  A  C  P  A  K  I  Q  V  G  *  P  P  M  L  N  *  S  A  Q  K  G  I  K  V  T  K  I  I  I  A  S  S  *  P  S  E  A  I  K  S  T  V  R  G  N  I  I  E  E  E  D  G  F  K  A  *  R  I  A  F  L  K  R  D  I  A  R  V  H  I  G  K  I  L  A  T  A  F  K  I  Q  Q  S  P  Y  I  Y  M  H  I  F  L  F  G  L  L  L  E  S  V  Y  I  Y  K  P </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0002D20.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="52546" PGL_stop="51873"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="52546" e_stop="51873"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="52546" e_stop="51873" e_length="674"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52546" stop="51873"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U582544" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTTAAGTATGAGGCGGCGGTGAAAGCACAGAGGATTAGGGAGTTTCAATGGGTGGTTTTGCCACTCTGTTATTCTCTGCTGCCGATGATCACTCAAAATGATTGCAAAAAACCACCCTTTTGGTGAACTTCCACTAGACCTTCCTTTGTTCCCAATTGCTGTTACCCCTCAGTCCCAATCTGTCAGGCTATGAAGATTTGAAAGAATTTGTCTTCTTTGGAAGATGAATCAGACATATATTTCCATTGAGCTGGAAAAAAATTGTATCTTGGCGTGGCAGTTCAGATGGGTCTGGTGAGAATGGAGGAGAAAGTATTCTTTTCTGTCTCATAAATCTAACTGAAGATTGCAGCCATGACGCTGTCTTTTTAAAAGCTTTTTGGTTTTGTCTGAGAAAAGGCGAATCTGAGCCTTATCTCATTAGTTTGAGTCTGAGGCTGTGTAAAAGCAGAGAGCTTTAGGGAGTTCCAATGGGTGGTTTGCCGCTCTCTGTTACTCTTTGATGCCGATGATCACTCAAATGATTACAAAAAACACCCTTCCATTTGTTACACCCTATGTTTTTTTTTGGTTGCTACTTCCTACGTCTCAAATTATGTTCAAGGAGGCAATGAAGAATTAAAGTTTCTTGTCTTCTTTGGAAGATGAAACAGACATATAAACTCATTGAGCT</gDNA_template>
            <first_frame> V  *  V  *  G  G  G  E  S  T  E  D  *  G  V  S  M  G  G  F  A  T  L  L  F  S  A  A  D  D  H  S  K  *  L  Q  K  T  T  L  L  V  N  F  H  *  T  F  L  C  S  Q  L  L  L  P  L  S  P  N  L  S  G  Y  E  D  L  K  E  F  V  F  F  G  R  *  I  R  H  I  F  P  L  S  W  K  K  I  V  S  W  R  G  S  S  D  G  S  G  E  N  G  G  E  S  I  L  F  C  L  I  N  L  T  E  D  C  S  H  D  A  V  F  L  K  A  F  W  F  C  L  R  K  G  E  S  E  P  Y  L  I  S  L  S  L  R  L  C  K  S  R  E  L  *  G  V  P  M  G  G  L  P  L  S  V  T  L  *  C  R  *  S  L  K  *  L  Q  K  T  P  F  H  L  L  H  P  M  F  F  F  G  C  Y  F  L  R  L  K  L  C  S  R  R  Q  *  R  I  K  V  S  C  L  L  W  K  M  K  Q  T  Y  K  L  I  E   </first_frame>
            <second_frame>  F  K  Y  E  A  A  V  K  A  Q  R  I  R  E  F  Q  W  V  V  L  P  L  C  Y  S  L  L  P  M  I  T  Q  N  D  C  K  K  P  P  F  W  *  T  S  T  R  P  S  F  V  P  N  C  C  Y  P  S  V  P  I  C  Q  A  M  K  I  *  K  N  L  S  S  L  E  D  E  S  D  I  Y  F  H  *  A  G  K  K  L  Y  L  G  V  A  V  Q  M  G  L  V  R  M  E  E  K  V  F  F  S  V  S  *  I  *  L  K  I  A  A  M  T  L  S  F  *  K  L  F  G  F  V  *  E  K  A  N  L  S  L  I  S  L  V  *  V  *  G  C  V  K  A  E  S  F  R  E  F  Q  W  V  V  C  R  S  L  L  L  F  D  A  D  D  H  S  N  D  Y  K  K  H  P  S  I  C  Y  T  L  C  F  F  L  V  A  T  S  Y  V  S  N  Y  V  Q  G  G  N  E  E  L  K  F  L  V  F  F  G  R  *  N  R  H  I  N  S  L  S  </second_frame>
            <third_frame>   L  S  M  R  R  R  *  K  H  R  G  L  G  S  F  N  G  W  F  C  H  S  V  I  L  C  C  R  *  S  L  K  M  I  A  K  N  H  P  F  G  E  L  P  L  D  L  P  L  F  P  I  A  V  T  P  Q  S  Q  S  V  R  L  *  R  F  E  R  I  C  L  L  W  K  M  N  Q  T  Y  I  S  I  E  L  E  K  N  C  I  L  A  W  Q  F  R  W  V  W  *  E  W  R  R  K  Y  S  F  L  S  H  K  S  N  *  R  L  Q  P  *  R  C  L  F  K  S  F  L  V  L  S  E  K  R  R  I  *  A  L  S  H  *  F  E  S  E  A  V  *  K  Q  R  A  L  G  S  S  N  G  W  F  A  A  L  C  Y  S  L  M  P  M  I  T  Q  M  I  T  K  N  T  L  P  F  V  T  P  Y  V  F  F  W  L  L  L  P  T  S  Q  I  M  F  K  E  A  M  K  N  *  S  F  L  S  S  L  E  D  E  T  D  I  *  T  H  *  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52318" stop="52085"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>231</number_coding_nucleotides>
                  <number_encoded_amino_acids>77</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IRHIFPLSWKKIVSWRGSSDGSGENGGESILFCLINLTEDCSHDAVFLKAFWFCLRKGESEPYLISLSLRLCKSREL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52110" stop="51898"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GCVKAESFREFQWVVCRSLLLFDADDHSNDYKKHPSICYTLCFFLVATSYVSNYVQGGNEELKFLVFFGR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="54758" PGL_stop="54000"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="54758" e_stop="54000"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="54758" e_stop="54000" e_length="759"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54758" stop="54000"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U602972" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TATTTCTTGTGTATCTAATGCATTGTGCATATGTTTCGGTTGTCGGTCCTCACTGGCTCTGTTTCAATGCAATGCAAACAGAGTACATGTTCATAATGCCAGCAAGAGGAAACAATGAGGCTATGATGATAGTTTTGCTGAGCTCTTTGAGTCGGGCATAAGAGTTCTGTAGCTGCTGTGGCGGGGCAATCTGAATTTCTGGAAATTTGCAGCTATGGCTGGGCACAAAGAACTCAAAGCCCGAAGACATAATCTGAGCCTCTTGCATCATTTCTCCATTACCAAAACCAACAGCCCTCTTCTAGTCCTTTTCCTTTCTTCACTATAGAAAACAGAGGGAGCATTAACATCAGCAGCAGCAGCAGCAGTAGTTGGACCTCATTCTGATTTATGAGCTCAGGTCCAAAGCATCTCAAATTCCCCGAATCCTATGCTACCAGAATCAACGAAGCAGATGATATTTGCTTATCTTGGCTTAAAAAAAGGTTGTTCGGGTTTACAGACAAGTAGATCTGTATCTTGGCTTGGCAAAAACCCATGATGGTATGTGATTTGAGACTCCTCGATCACATGCAACTGGTTCTTTTGCAGCTATGGCGTTGTCTCCTCTCTCTCTTTGACCATTCATTAGTAGCCAGCTGCGAGTGTCAAAATTGCCAGTAATTCTTCTGGACATTGTTTGATGGGGAAATCGTTAAATGAGACATCATTGATGAGAAATGTGAATAATTTATTTTTTGATTCGGTTTTGCTGGTAAG</gDNA_template>
            <first_frame> Y  F  L  C  I  *  C  I  V  H  M  F  R  L  S  V  L  T  G  S  V  S  M  Q  C  K  Q  S  T  C  S  *  C  Q  Q  E  E  T  M  R  L  *  *  *  F  C  *  A  L  *  V  G  H  K  S  S  V  A  A  V  A  G  Q  S  E  F  L  E  I  C  S  Y  G  W  A  Q  R  T  Q  S  P  K  T  *  S  E  P  L  A  S  F  L  H  Y  Q  N  Q  Q  P  S  S  S  P  F  P  F  F  T  I  E  N  R  G  S  I  N  I  S  S  S  S  S  S  S  W  T  S  F  *  F  M  S  S  G  P  K  H  L  K  F  P  E  S  Y  A  T  R  I  N  E  A  D  D  I  C  L  S  W  L  K  K  R  L  F  G  F  T  D  K  *  I  C  I  L  A  W  Q  K  P  M  M  V  C  D  L  R  L  L  D  H  M  Q  L  V  L  L  Q  L  W  R  C  L  L  S  L  F  D  H  S  L  V  A  S  C  E  C  Q  N  C  Q  *  F  F  W  T  L  F  D  G  E  I  V  K  *  D  I  I  D  E  K  C  E  *  F  I  F  *  F  G  F  A  G  K </first_frame>
            <second_frame>  I  S  C  V  S  N  A  L  C  I  C  F  G  C  R  S  S  L  A  L  F  Q  C  N  A  N  R  V  H  V  H  N  A  S  K  R  K  Q  *  G  Y  D  D  S  F  A  E  L  F  E  S  G  I  R  V  L  *  L  L  W  R  G  N  L  N  F  W  K  F  A  A  M  A  G  H  K  E  L  K  A  R  R  H  N  L  S  L  L  H  H  F  S  I  T  K  T  N  S  P  L  L  V  L  F  L  S  S  L  *  K  T  E  G  A  L  T  S  A  A  A  A  A  V  V  G  P  H  S  D  L  *  A  Q  V  Q  S  I  S  N  S  P  N  P  M  L  P  E  S  T  K  Q  M  I  F  A  Y  L  G  L  K  K  G  C  S  G  L  Q  T  S  R  S  V  S  W  L  G  K  N  P  *  W  Y  V  I  *  D  S  S  I  T  C  N  W  F  F  C  S  Y  G  V  V  S  S  L  S  L  T  I  H  *  *  P  A  A  S  V  K  I  A  S  N  S  S  G  H  C  L  M  G  K  S  L  N  E  T  S  L  M  R  N  V  N  N  L  F  F  D  S  V  L  L  V   </second_frame>
            <third_frame>   F  L  V  Y  L  M  H  C  A  Y  V  S  V  V  G  P  H  W  L  C  F  N  A  M  Q  T  E  Y  M  F  I  M  P  A  R  G  N  N  E  A  M  M  I  V  L  L  S  S  L  S  R  A  *  E  F  C  S  C  C  G  G  A  I  *  I  S  G  N  L  Q  L  W  L  G  T  K  N  S  K  P  E  D  I  I  *  A  S  C  I  I  S  P  L  P  K  P  T  A  L  F  *  S  F  S  F  L  H  Y  R  K  Q  R  E  H  *  H  Q  Q  Q  Q  Q  Q  *  L  D  L  I  L  I  Y  E  L  R  S  K  A  S  Q  I  P  R  I  L  C  Y  Q  N  Q  R  S  R  *  Y  L  L  I  L  A  *  K  K  V  V  R  V  Y  R  Q  V  D  L  Y  L  G  L  A  K  T  H  D  G  M  *  F  E  T  P  R  S  H  A  T  G  S  F  A  A  M  A  L  S  P  L  S  L  *  P  F  I  S  S  Q  L  R  V  S  K  L  P  V  I  L  L  D  I  V  *  W  G  N  R  *  M  R  H  H  *  *  E  M  *  I  I  Y  F  L  I  R  F  C  W  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0002D20.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="59057" PGL_stop="58452"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="59057" e_stop="58452"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="59057" e_stop="58452" e_length="606"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59057" stop="58452"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596270" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTGAGGCAGTGATGATATTGTTCTTGGCAAACAAAAGCTAAGTTGAGCATAGCCTAGAAAGGAAGAAGAATGAGGCATCTGAGAAATTGGGACTTTCTGAAAGGGTGGTTGCCCCTCTCTGCTATGCCAGTGAATTCTCCGTTAATGGACCATAAAAACCAACAGCCCTTCGAAATAAACAAGAAAAAACAAAAAACCTTCATACCAAACACAACCTTATACTCTTCTTGCTCTTCCTCTTTCTTCTCTCTTTGTGCTGCTAATGTTGTGAAGGGGCTATGATGATTGTTGCTTCTTTTCTGGGTTATATTCAATCATGGTAATTGAGAAAATATCCTACCGTATCTTGGCATGGCGACCTGGTTAGGCTTTGAAGAGCAAACTGGTGTCTGCAGCCATGGCGGCGTCACTCTTCTCTTGTTCAAGTACAGCAAATCTGAGCCCTCAATAACCCATTACTACAACAACATATCCGGAAGTGGTGTGGGGGAAGATGGTGTCTGTGCAGCCTTTACCCCAACCCATTCGGGTCGGAAAATCCATTACGGATTTCCAATGAAATTTCAACTCTGAAGAATGAGGCGTCAGAGAATGGGATTTCTGTA</gDNA_template>
            <first_frame> I  E  A  V  M  I  L  F  L  A  N  K  S  *  V  E  H  S  L  E  R  K  K  N  E  A  S  E  K  L  G  L  S  E  R  V  V  A  P  L  C  Y  A  S  E  F  S  V  N  G  P  *  K  P  T  A  L  R  N  K  Q  E  K  T  K  N  L  H  T  K  H  N  L  I  L  F  L  L  F  L  F  L  L  S  L  C  C  *  C  C  E  G  A  M  M  I  V  A  S  F  L  G  Y  I  Q  S  W  *  L  R  K  Y  P  T  V  S  W  H  G  D  L  V  R  L  *  R  A  N  W  C  L  Q  P  W  R  R  H  S  S  L  V  Q  V  Q  Q  I  *  A  L  N  N  P  L  L  Q  Q  H  I  R  K  W  C  G  G  R  W  C  L  C  S  L  Y  P  N  P  F  G  S  E  N  P  L  R  I  S  N  E  I  S  T  L  K  N  E  A  S  E  N  G  I  S  V </first_frame>
            <second_frame>  L  R  Q  *  *  Y  C  S  W  Q  T  K  A  K  L  S  I  A  *  K  G  R  R  M  R  H  L  R  N  W  D  F  L  K  G  W  L  P  L  S  A  M  P  V  N  S  P  L  M  D  H  K  N  Q  Q  P  F  E  I  N  K  K  K  Q  K  T  F  I  P  N  T  T  L  Y  S  S  C  S  S  S  F  F  S  L  C  A  A  N  V  V  K  G  L  *  *  L  L  L  L  F  W  V  I  F  N  H  G  N  *  E  N  I  L  P  Y  L  G  M  A  T  W  L  G  F  E  E  Q  T  G  V  C  S  H  G  G  V  T  L  L  L  F  K  Y  S  K  S  E  P  S  I  T  H  Y  Y  N  N  I  S  G  S  G  V  G  E  D  G  V  C  A  A  F  T  P  T  H  S  G  R  K  I  H  Y  G  F  P  M  K  F  Q  L  *  R  M  R  R  Q  R  M  G  F  L   </second_frame>
            <third_frame>   *  G  S  D  D  I  V  L  G  K  Q  K  L  S  *  A  *  P  R  K  E  E  E  *  G  I  *  E  I  G  T  F  *  K  G  G  C  P  S  L  L  C  Q  *  I  L  R  *  W  T  I  K  T  N  S  P  S  K  *  T  R  K  N  K  K  P  S  Y  Q  T  Q  P  Y  T  L  L  A  L  P  L  S  S  L  F  V  L  L  M  L  *  R  G  Y  D  D  C  C  F  F  S  G  L  Y  S  I  M  V  I  E  K  I  S  Y  R  I  L  A  W  R  P  G  *  A  L  K  S  K  L  V  S  A  A  M  A  A  S  L  F  S  C  S  S  T  A  N  L  S  P  Q  *  P  I  T  T  T  T  Y  P  E  V  V  W  G  K  M  V  S  V  Q  P  L  P  Q  P  I  R  V  G  K  S  I  T  D  F  Q  *  N  F  N  S  E  E  *  G  V  R  E  W  D  F  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="58729" stop="58484"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ENILPYLGMATWLGFEEQTGVCSHGGVTLLLFKYSKSEPSITHYYNNISGSGVGEDGVCAAFTPTHSGRKIHYGFPMKFQL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="58999" stop="58775"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KGRRMRHLRNWDFLKGWLPLSAMPVNSPLMDHKNQQPFEINKKKQKTFIPNTTLYSSCSSSFFSLCAANVVKGL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="64922" PGL_stop="64112"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="64922" e_stop="64112"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="64922" e_stop="64112" e_length="811"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64922" stop="64112"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U573644" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAAAAGAAGCAAAGAAAAGGTTAGCCCAGAAAAGAAAAAAGAGGCAAAACAGAGAGTTTTTGGATTTTATTAACAAGGGTGGTTGCCCCTCTCTTGTTTAGCCTATGAATGATTCTTTTAGAGATGAAGCAACAACCCTTGAATTCATGTTAATTTCCTGGGAATTATTGGAACATGCATGCCATACATACATACATACAACAAACATACATATATTCCTCAACTTTCCAATTCTACATCTATGCCATTCTCTTTTTTGTTAATTAATTACTCACTCTTTGTTGGTGTTTGATCTATTGAGGCTGTGATGATGATGATGATGGGCTAACCGGATCGGGCTTGGAGATTATGCGACTCGTATCTTGGCTTGGCAAATTTTGCAGCCATGGCGTGGTCGTCTCTCTCTTTGTTCCGATCTCTTTGCAGATCTGAGCCTTTTGGACACATGCATGTGTTTCTGGGAAATGACTGAATTATTGAACATGGAAAATTAAACCTTTTCTTCAACTTCAACAACTATGGTTACAAACTCTGTTTCTTCTGTGTTTTTTTTTATCCAAATAATGAGAGGCGATGATGAAGATAATGATTTCTTTGGATTCTGGGCTAATCGGGTCGGGTATGAAGATTATACGACCCGTATCTTGGCTTGGCAAATTTTGCAGCCATGGCGTGGTCGGCTCTCTTCTACCTCGATTTCTTTTGCAGATCTGAGCCTCTAAATTCATAATGAATAACTTTTGGATTCATACAAAACTTCTGCTGGAAATTGATATTTCATTCAAAACTCGTCTTTGTTTGTTTGTATTTT</gDNA_template>
            <first_frame> E  K  K  Q  R  K  G  *  P  R  K  E  K  R  G  K  T  E  S  F  W  I  L  L  T  R  V  V  A  P  L  L  F  S  L  *  M  I  L  L  E  M  K  Q  Q  P  L  N  S  C  *  F  P  G  N  Y  W  N  M  H  A  I  H  T  Y  I  Q  Q  T  Y  I  Y  S  S  T  F  Q  F  Y  I  Y  A  I  L  F  F  V  N  *  L  L  T  L  C  W  C  L  I  Y  *  G  C  D  D  D  D  D  G  L  T  G  S  G  L  E  I  M  R  L  V  S  W  L  G  K  F  C  S  H  G  V  V  V  S  L  F  V  P  I  S  L  Q  I  *  A  F  W  T  H  A  C  V  S  G  K  *  L  N  Y  *  T  W  K  I  K  P  F  L  Q  L  Q  Q  L  W  L  Q  T  L  F  L  L  C  F  F  L  S  K  *  *  E  A  M  M  K  I  M  I  S  L  D  S  G  L  I  G  S  G  M  K  I  I  R  P  V  S  W  L  G  K  F  C  S  H  G  V  V  G  S  L  L  P  R  F  L  L  Q  I  *  A  S  K  F  I  M  N  N  F  W  I  H  T  K  L  L  L  E  I  D  I  S  F  K  T  R  L  C  L  F  V  F  </first_frame>
            <second_frame>  K  R  S  K  E  K  V  S  P  E  K  K  K  E  A  K  Q  R  V  F  G  F  Y  *  Q  G  W  L  P  L  S  C  L  A  Y  E  *  F  F  *  R  *  S  N  N  P  *  I  H  V  N  F  L  G  I  I  G  T  C  M  P  Y  I  H  T  Y  N  K  H  T  Y  I  P  Q  L  S  N  S  T  S  M  P  F  S  F  L  L  I  N  Y  S  L  F  V  G  V  *  S  I  E  A  V  M  M  M  M  M  G  *  P  D  R  A  W  R  L  C  D  S  Y  L  G  L  A  N  F  A  A  M  A  W  S  S  L  S  L  F  R  S  L  C  R  S  E  P  F  G  H  M  H  V  F  L  G  N  D  *  I  I  E  H  G  K  L  N  L  F  F  N  F  N  N  Y  G  Y  K  L  C  F  F  C  V  F  F  Y  P  N  N  E  R  R  *  *  R  *  *  F  L  W  I  L  G  *  S  G  R  V  *  R  L  Y  D  P  Y  L  G  L  A  N  F  A  A  M  A  W  S  A  L  F  Y  L  D  F  F  C  R  S  E  P  L  N  S  *  *  I  T  F  G  F  I  Q  N  F  C  W  K  L  I  F  H  S  K  L  V  F  V  C  L  Y  F </second_frame>
            <third_frame>   K  E  A  K  K  R  L  A  Q  K  R  K  K  R  Q  N  R  E  F  L  D  F  I  N  K  G  G  C  P  S  L  V  *  P  M  N  D  S  F  R  D  E  A  T  T  L  E  F  M  L  I  S  W  E  L  L  E  H  A  C  H  T  Y  I  H  T  T  N  I  H  I  F  L  N  F  P  I  L  H  L  C  H  S  L  F  C  *  L  I  T  H  S  L  L  V  F  D  L  L  R  L  *  *  *  *  *  W  A  N  R  I  G  L  G  D  Y  A  T  R  I  L  A  W  Q  I  L  Q  P  W  R  G  R  L  S  L  C  S  D  L  F  A  D  L  S  L  L  D  T  C  M  C  F  W  E  M  T  E  L  L  N  M  E  N  *  T  F  S  S  T  S  T  T  M  V  T  N  S  V  S  S  V  F  F  F  I  Q  I  M  R  G  D  D  E  D  N  D  F  F  G  F  W  A  N  R  V  G  Y  E  D  Y  T  T  R  I  L  A  W  Q  I  L  Q  P  W  R  G  R  L  S  S  T  S  I  S  F  A  D  L  S  L  *  I  H  N  E  *  L  L  D  S  Y  K  T  S  A  G  N  *  Y  F  I  Q  N  S  S  L  F  V  C  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="64428" stop="64201"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TFSSTSTTMVTNSVSSVFFFIQIMRGDDEDNDFFGFWANRVGYEDYTTRILAWQILQPWRGRLSSTSISFADLSL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="68288" PGL_stop="67945"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="68288" e_stop="67945"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="68288" e_stop="67945" e_length="344"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68288" stop="67945"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U595365" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGTGTTTTGCAGCCATGGCGAGACTGGCTTCTCTTTTGCCATATCATTACATACATCTGAGCCACAATTTGTTGAAGAACATAAGTAGGCATTTGGACATTATTGCAGTTAAATTCTCTTAAATGCAGACTTGTGACGTCTCGTCAGTTAGAAGCTCTAATCTAAACGAACTTCCTTCTTTTAGCAGGAATGACGAGTATGAGGCAGCAGAGAGTATGGGATTTCTTTCAAGGGTGGTTGCCCCTCTCTACTTTGCCTATGATTCTACCCTTCTCAACAAACCAACAGCCCTTAAGAAAAGAAAAAAGAGAAAATATATTCCACTTCAGTTTCTTGGTTTCTTT</gDNA_template>
            <first_frame> G  V  L  Q  P  W  R  D  W  L  L  F  C  H  I  I  T  Y  I  *  A  T  I  C  *  R  T  *  V  G  I  W  T  L  L  Q  L  N  S  L  K  C  R  L  V  T  S  R  Q  L  E  A  L  I  *  T  N  F  L  L  L  A  G  M  T  S  M  R  Q  Q  R  V  W  D  F  F  Q  G  W  L  P  L  S  T  L  P  M  I  L  P  F  S  T  N  Q  Q  P  L  R  K  E  K  R  E  N  I  F  H  F  S  F  L  V  S   </first_frame>
            <second_frame>  V  F  C  S  H  G  E  T  G  F  S  F  A  I  S  L  H  T  S  E  P  Q  F  V  E  E  H  K  *  A  F  G  H  Y  C  S  *  I  L  L  N  A  D  L  *  R  L  V  S  *  K  L  *  S  K  R  T  S  F  F  *  Q  E  *  R  V  *  G  S  R  E  Y  G  I  S  F  K  G  G  C  P  S  L  L  C  L  *  F  Y  P  S  Q  Q  T  N  S  P  *  E  K  K  K  E  K  I  Y  S  T  S  V  S  W  F  L  </second_frame>
            <third_frame>   C  F  A  A  M  A  R  L  A  S  L  L  P  Y  H  Y  I  H  L  S  H  N  L  L  K  N  I  S  R  H  L  D  I  I  A  V  K  F  S  *  M  Q  T  C  D  V  S  S  V  R  S  S  N  L  N  E  L  P  S  F  S  R  N  D  E  Y  E  A  A  E  S  M  G  F  L  S  R  V  V  A  P  L  Y  F  A  Y  D  S  T  L  L  N  K  P  T  A  L  K  K  R  K  K  R  K  Y  I  P  L  Q  F  L  G  F  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68166" stop="67945"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MQTCDVSSVRSSNLNELPSFSRNDEYEAAESMGFLSRVVAPLYFAYDSTLLNKPTALKKRKKRKYIPLQFLGFF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="69376" PGL_stop="68624"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="69376" e_stop="68624"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.910"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.910">
            <gDNA_exon_boundary e_start="69376" e_stop="68624" e_length="753"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69376" stop="68624"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U595366" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTGAGCCTCAGGAGAAAGAATTAGCCGAAAGATGCTTGAAGTCTTGTGAATTCCCTTTTGTTAGGTCAGCCTATAAAAGGCAAGAATGAGGCAGCAGAGAGTATGGGATTTCTATCAAGGGTGGTTGGCCTTCTCTCTATGCTTTGCTTATGATTCTCCATTTCTCAAAACAAACCAACAGCCCTTCAAAAGAAAGAGACAGAGAGAGTACAATTGAGTTTCTGGGTTTATTTGCAGTTTGCACCACCCTTAAGACATATGTATACACAACTATACTACAACTATAAAATGACTATGAAAACTATTAAAGAGGCAGTGATGATTTCTGGGCTAGCAAGATTTCGGGCATGGAGAGTACCCAACCCGTACCTTGGCATGACAACACGGTATGGCCTGTAATTGAGACGCATAACTCACACATGCAATCGTGCGTTGCAGCCATGGCATGGCTGGCTTCTCTTTTTCCTCGTCATTACACAAATCTGAGCCTCAATTTGCTAAAGAAAAAAAGGGAAAATGATCAAATTTGCCCCTTTACTATGCATAAGGGGCAATATCTTTTCCATGATCAAAGTGGGAGATATTGAGGTCTTCTCGTTTTAAGCTCTCATACAAGCAAATTCCATCTATTAGGTTTGCCCAGAAATAGAGAGAATGAGGCTGCAGAGAGAGTATGGGATTTCTTTCAAGGGTGGTTGCCCCTGTCTGCTTTGCCTATGATTCTCCCCTTCTCAACAAACCAACAGCCTTTA</gDNA_template>
            <first_frame> S  E  P  Q  E  K  E  L  A  E  R  C  L  K  S  C  E  F  P  F  V  R  S  A  Y  K  R  Q  E  *  G  S  R  E  Y  G  I  S  I  K  G  G  W  P  S  L  Y  A  L  L  M  I  L  H  F  S  K  Q  T  N  S  P  S  K  E  R  D  R  E  S  T  I  E  F  L  G  L  F  A  V  C  T  T  L  K  T  Y  V  Y  T  T  I  L  Q  L  *  N  D  Y  E  N  Y  *  R  G  S  D  D  F  W  A  S  K  I  S  G  M  E  S  T  Q  P  V  P  W  H  D  N  T  V  W  P  V  I  E  T  H  N  S  H  M  Q  S  C  V  A  A  M  A  W  L  A  S  L  F  P  R  H  Y  T  N  L  S  L  N  L  L  K  K  K  R  E  N  D  Q  I  C  P  F  T  M  H  K  G  Q  Y  L  F  H  D  Q  S  G  R  Y  *  G  L  L  V  L  S  S  H  T  S  K  F  H  L  L  G  L  P  R  N  R  E  N  E  A  A  E  R  V  W  D  F  F  Q  G  W  L  P  L  S  A  L  P  M  I  L  P  F  S  T  N  Q  Q  P  L </first_frame>
            <second_frame>  L  S  L  R  R  K  N  *  P  K  D  A  *  S  L  V  N  S  L  L  L  G  Q  P  I  K  G  K  N  E  A  A  E  S  M  G  F  L  S  R  V  V  G  L  L  S  M  L  C  L  *  F  S  I  S  Q  N  K  P  T  A  L  Q  K  K  E  T  E  R  V  Q  L  S  F  W  V  Y  L  Q  F  A  P  P  L  R  H  M  Y  T  Q  L  Y  Y  N  Y  K  M  T  M  K  T  I  K  E  A  V  M  I  S  G  L  A  R  F  R  A  W  R  V  P  N  P  Y  L  G  M  T  T  R  Y  G  L  *  L  R  R  I  T  H  T  C  N  R  A  L  Q  P  W  H  G  W  L  L  F  F  L  V  I  T  Q  I  *  A  S  I  C  *  R  K  K  G  K  M  I  K  F  A  P  L  L  C  I  R  G  N  I  F  S  M  I  K  V  G  D  I  E  V  F  S  F  *  A  L  I  Q  A  N  S  I  Y  *  V  C  P  E  I  E  R  M  R  L  Q  R  E  Y  G  I  S  F  K  G  G  C  P  C  L  L  C  L  *  F  S  P  S  Q  Q  T  N  S  L   </second_frame>
            <third_frame>   *  A  S  G  E  R  I  S  R  K  M  L  E  V  L  *  I  P  F  C  *  V  S  L  *  K  A  R  M  R  Q  Q  R  V  W  D  F  Y  Q  G  W  L  A  F  S  L  C  F  A  Y  D  S  P  F  L  K  T  N  Q  Q  P  F  K  R  K  R  Q  R  E  Y  N  *  V  S  G  F  I  C  S  L  H  H  P  *  D  I  C  I  H  N  Y  T  T  T  I  K  *  L  *  K  L  L  K  R  Q  *  *  F  L  G  *  Q  D  F  G  H  G  E  Y  P  T  R  T  L  A  *  Q  H  G  M  A  C  N  *  D  A  *  L  T  H  A  I  V  R  C  S  H  G  M  A  G  F  S  F  S  S  S  L  H  K  S  E  P  Q  F  A  K  E  K  K  G  K  *  S  N  L  P  L  Y  Y  A  *  G  A  I  S  F  P  *  S  K  W  E  I  L  R  S  S  R  F  K  L  S  Y  K  Q  I  P  S  I  R  F  A  Q  K  *  R  E  *  G  C  R  E  S  M  G  F  L  S  R  V  V  A  P  V  C  F  A  Y  D  S  P  L  L  N  K  P  T  A  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69067" stop="68789"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>276</number_coding_nucleotides>
                  <number_encoded_amino_acids>92</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RGSDDFWASKISGMESTQPVPWHDNTVWPVIETHNSHMQSCVAAMAWLASLFPRHYTNLSLNLLKKKRENDQICPFTMHKGQYLFHDQSGRY*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69222" stop="68977"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FSISQNKPTALQKKETERVQLSFWVYLQFAPPLRHMYTQLYYNYKMTMKTIKEAVMISGLARFRAWRVPNPYLGMTTRYGL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69286" stop="69089"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GSREYGISIKGGWPSLYALLMILHFSKQTNSPSKERDRESTIEFLGLFAVCTTLKTYVYTTILQL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="-" PGL_start="77608" PGL_stop="76209"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="77608" e_stop="77522"/>
            <exon e_start="77039" e_stop="76209"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.244" acc_prob="0.997" e_score="0.977"/>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.977">
            <gDNA_exon_boundary e_start="77608" e_stop="77522" e_length="87"/>
          </exon>
          <intron i_serial="1" don_prob="0.244" acc_prob="0.997">
            <gDNA_intron_boundary i_start="77521" i_stop="77040" i_length="482"/>
          </intron>
          <exon e_serial="2" e_score="0.999">
            <gDNA_exon_boundary e_start="77039" e_stop="76209" e_length="831"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77608" stop="77522"/>
              <exon start="77039" stop="76209"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563274" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACTTAGTTGTAAGTTGTAACTACTTGCAGCTTGTTGTGAGCTCAAATTGGAACTTATTTCAAAATTGACTTGGATTCTTTGATATTT : GTGAGCTCAAAGGGAAAATTTGTGCAAGGAACCAATGACAACAAGATCCACAGGAATCGCCAATCCTCCAAGAAACATCAGGAAGCAGCTTCATCAGACGATGAGCAGGAGGATTCCAGGAGGGGACGTTCCAAGCTGGAACGATGGACAAGCCACAAGGAAAGAGACTTTGGTATCAATGCTAAATCATCTTCCTTGAACATGAAAGACAGCAATGTACACAAGGGCACCGGTACTTCATTAGCTAACAAAAATCAAGATGAAGCTTTAAAGATGGTCGAAGAAAATCAACAACCTGCAGCTAACTATAAAAATGGAGGTGCCCCTGAGATTAATAGCCTAGAAACAAAGCCTGTGGAGGATAAACATTTGGAGACAGTTGAGAAGTTGAAGAAGCGTAGTGAGCGCTTCAAGCTTCCAATGCCAAGTGAGAAAGAAGCTCCAGTAAGTAAAAAGGTGGAAGGTGATCCATTATCCTCAGTTCAAAGCGAAACCCCTCCAGATTCAGAGGTGAAGCCAGAGCGTCCAGCACGCAGGAGGAGATGGACAAGCAGTTAAATGAGGAATTCAAGGAACATCTTTGTTTGATGGCTTATTTCCTACTCATGGAGTATATGCCCTCCTTGGCTAATGTTTTACCAATGTGCTTGTCAACTTAAGGAAGCCTGTACTGCTGTTGTCTATTCTGGATCTGAGGTTTGTGTAGACCTCCCATAGTAGATTTGGGTATCTGTAACCATGTTCAGATTATCTATTTGGTTTTCTTATTTCTGTAATACATGTATATACCAGTAAGCCTAACATCATAGTGGCCCATTGTTGGGGTGCCAG</gDNA_template>
            <first_frame> T  *  L  *  V  V  T  T  C  S  L  L  *  A  Q  I  G  T  Y  F  K  I  D  L  D  S  L  I  F  :  V  S  S  K  G  K  F  V  Q  G  T  N  D  N  K  I  H  R  N  R  Q  S  S  K  K  H  Q  E  A  A  S  S  D  D  E  Q  E  D  S  R  R  G  R  S  K  L  E  R  W  T  S  H  K  E  R  D  F  G  I  N  A  K  S  S  S  L  N  M  K  D  S  N  V  H  K  G  T  G  T  S  L  A  N  K  N  Q  D  E  A  L  K  M  V  E  E  N  Q  Q  P  A  A  N  Y  K  N  G  G  A  P  E  I  N  S  L  E  T  K  P  V  E  D  K  H  L  E  T  V  E  K  L  K  K  R  S  E  R  F  K  L  P  M  P  S  E  K  E  A  P  V  S  K  K  V  E  G  D  P  L  S  S  V  Q  S  E  T  P  P  D  S  E  V  K  P  E  R  P  A  R  R  R  R  W  T  S  S  *  M  R  N  S  R  N  I  F  V  *  W  L  I  S  Y  S  W  S  I  C  P  P  W  L  M  F  Y  Q  C  A  C  Q  L  K  E  A  C  T  A  V  V  Y  S  G  S  E  V  C  V  D  L  P  *  *  I  W  V  S  V  T  M  F  R  L  S  I  W  F  S  Y  F  C  N  T  C  I  Y  Q  *  A  *  H  H  S  G  P  L  L  G  C  Q </first_frame>
            <second_frame>  L  S  C  K  L  *  L  L  A  A  C  C  E  L  K  L  E  L  I  S  K  L  T  W  I  L  *  Y  L :   *  A  Q  R  E  N  L  C  K  E  P  M  T  T  R  S  T  G  I  A  N  P  P  R  N  I  R  K  Q  L  H  Q  T  M  S  R  R  I  P  G  G  D  V  P  S  W  N  D  G  Q  A  T  R  K  E  T  L  V  S  M  L  N  H  L  P  *  T  *  K  T  A  M  Y  T  R  A  P  V  L  H  *  L  T  K  I  K  M  K  L  *  R  W  S  K  K  I  N  N  L  Q  L  T  I  K  M  E  V  P  L  R  L  I  A  *  K  Q  S  L  W  R  I  N  I  W  R  Q  L  R  S  *  R  S  V  V  S  A  S  S  F  Q  C  Q  V  R  K  K  L  Q  *  V  K  R  W  K  V  I  H  Y  P  Q  F  K  A  K  P  L  Q  I  Q  R  *  S  Q  S  V  Q  H  A  G  G  D  G  Q  A  V  K  *  G  I  Q  G  T  S  L  F  D  G  L  F  P  T  H  G  V  Y  A  L  L  G  *  C  F  T  N  V  L  V  N  L  R  K  P  V  L  L  L  S  I  L  D  L  R  F  V  *  T  S  H  S  R  F  G  Y  L  *  P  C  S  D  Y  L  F  G  F  L  I  S  V  I  H  V  Y  T  S  K  P  N  I  I  V  A  H  C  W  G  A   </second_frame>
            <third_frame>   L  V  V  S  C  N  Y  L  Q  L  V  V  S  S  N  W  N  L  F  Q  N  *  L  G  F  F  D  I   : C  E  L  K  G  K  I  C  A  R  N  Q  *  Q  Q  D  P  Q  E  S  P  I  L  Q  E  T  S  G  S  S  F  I  R  R  *  A  G  G  F  Q  E  G  T  F  Q  A  G  T  M  D  K  P  Q  G  K  R  L  W  Y  Q  C  *  I  I  F  L  E  H  E  R  Q  Q  C  T  Q  G  H  R  Y  F  I  S  *  Q  K  S  R  *  S  F  K  D  G  R  R  K  S  T  T  C  S  *  L  *  K  W  R  C  P  *  D  *  *  P  R  N  K  A  C  G  G  *  T  F  G  D  S  *  E  V  E  E  A  *  *  A  L  Q  A  S  N  A  K  *  E  R  S  S  S  K  *  K  G  G  R  *  S  I  I  L  S  S  K  R  N  P  S  R  F  R  G  E  A  R  A  S  S  T  Q  E  E  M  D  K  Q  L  N  E  E  F  K  E  H  L  C  L  M  A  Y  F  L  L  M  E  Y  M  P  S  L  A  N  V  L  P  M  C  L  S  T  *  G  S  L  Y  C  C  C  L  F  W  I  *  G  L  C  R  P  P  I  V  D  L  G  I  C  N  H  V  Q  I  I  Y  L  V  F  L  F  L  *  Y  M  Y  I  P  V  S  L  T  S  *  W  P  I  V  G  V  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="-"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="77569" stop="77522"/>
                    <exon start="77039" stop="76482"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>603</number_coding_nucleotides>
                  <number_encoded_amino_acids>201</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AQIGTYFKIDLDSLIFVSSKGKFVQGTNDNKIHRNRQSSKKHQEAASSDDEQEDSRRGRSKLERWTSHKERDFGINAKSSSLNMKDSNVHKGTGTSLANKNQDEALKMVEENQQPAANYKNGGAPEINSLETKPVEDKHLETVEKLKKRSERFKLPMPSEKEAPVSKKVEGDPLSSVQSETPPDSEVKPERPARRRRWTSS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="79976" PGL_stop="79340"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="79976" e_stop="79340"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="79976" e_stop="79340" e_length="637"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79976" stop="79340"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U562895" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGAGGTGAAATTAAGTAGGGAACACATTGACAAGGAAGAAACATTCCATTCCCATGGAGAAACTATGGTTCGCAGAAAGCGAGAGAGAGATGATGCCTCAGATCACCGAAAGAGAGATGAGCTGATGAGACTACGAGAAGATGAGCAGCTCTATATCAGGCACAAAGAAGATGGAGTGTTTCAGAGGGAGAGGAATGATAGACAGCGAGAACGTGAGGAGTGGTATAGGCTCAAACAGTCACATGAAGAGACACTACCAAAAAGGGAGAGAGAAGAAATAAGGGGCGGGATGCGGGCTGGACGTGTTCCGGAAGAAAAAGCTTGGGCTGCTCAATCTAGAGGGAAAGATGAGTATAGAAACTCTGATCAGCACTCGAAAGATGTGAGGCATGCTGACCATATTAGAAGGAGGGATCGTGTTGAAAATGAAAGTCCATCGAGGCTGAGGACACGTGAGGATGAAAGAAGAGCAAGGCATGACAGGGTGAACTCACGTGAAGATCGTGCTCCTATTGCTTCAGATAACTCCAGGGTTAATGAGAAAAGACATAAAGATTATTTGAAGAAGGGTAAAGAATTTGAGAGTGATCACAACTCCCAGATGGCTTTGAACATGAACGAAGATGAACTGAATGG</gDNA_template>
            <first_frame> K  R  *  N  *  V  G  N  T  L  T  R  K  K  H  S  I  P  M  E  K  L  W  F  A  E  S  E  R  E  M  M  P  Q  I  T  E  R  E  M  S  *  *  D  Y  E  K  M  S  S  S  I  S  G  T  K  K  M  E  C  F  R  G  R  G  M  I  D  S  E  N  V  R  S  G  I  G  S  N  S  H  M  K  R  H  Y  Q  K  G  R  E  K  K  *  G  A  G  C  G  L  D  V  F  R  K  K  K  L  G  L  L  N  L  E  G  K  M  S  I  E  T  L  I  S  T  R  K  M  *  G  M  L  T  I  L  E  G  G  I  V  L  K  M  K  V  H  R  G  *  G  H  V  R  M  K  E  E  Q  G  M  T  G  *  T  H  V  K  I  V  L  L  L  L  Q  I  T  P  G  L  M  R  K  D  I  K  I  I  *  R  R  V  K  N  L  R  V  I  T  T  P  R  W  L  *  T  *  T  K  M  N  *  M  </first_frame>
            <second_frame>  R  G  E  I  K  *  G  T  H  *  Q  G  R  N  I  P  F  P  W  R  N  Y  G  S  Q  K  A  R  E  R  *  C  L  R  S  P  K  E  R  *  A  D  E  T  T  R  R  *  A  A  L  Y  Q  A  Q  R  R  W  S  V  S  E  G  E  E  *  *  T  A  R  T  *  G  V  V  *  A  Q  T  V  T  *  R  D  T  T  K  K  G  E  R  R  N  K  G  R  D  A  G  W  T  C  S  G  R  K  S  L  G  C  S  I  *  R  E  R  *  V  *  K  L  *  S  A  L  E  R  C  E  A  C  *  P  Y  *  K  E  G  S  C  *  K  *  K  S  I  E  A  E  D  T  *  G  *  K  K  S  K  A  *  Q  G  E  L  T  *  R  S  C  S  Y  C  F  R  *  L  Q  G  *  *  E  K  T  *  R  L  F  E  E  G  *  R  I  *  E  *  S  Q  L  P  D  G  F  E  H  E  R  R  *  T  E  W </second_frame>
            <third_frame>   E  V  K  L  S  R  E  H  I  D  K  E  E  T  F  H  S  H  G  E  T  M  V  R  R  K  R  E  R  D  D  A  S  D  H  R  K  R  D  E  L  M  R  L  R  E  D  E  Q  L  Y  I  R  H  K  E  D  G  V  F  Q  R  E  R  N  D  R  Q  R  E  R  E  E  W  Y  R  L  K  Q  S  H  E  E  T  L  P  K  R  E  R  E  E  I  R  G  G  M  R  A  G  R  V  P  E  E  K  A  W  A  A  Q  S  R  G  K  D  E  Y  R  N  S  D  Q  H  S  K  D  V  R  H  A  D  H  I  R  R  R  D  R  V  E  N  E  S  P  S  R  L  R  T  R  E  D  E  R  R  A  R  H  D  R  V  N  S  R  E  D  R  A  P  I  A  S  D  N  S  R  V  N  E  K  R  H  K  D  Y  L  K  K  G  K  E  F  E  S  D  H  N  S  Q  M  A  L  N  M  N  E  D  E  L  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79974" stop="79342"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>633</number_coding_nucleotides>
                  <number_encoded_amino_acids>211</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EVKLSREHIDKEETFHSHGETMVRRKRERDDASDHRKRDELMRLREDEQLYIRHKEDGVFQRERNDRQREREEWYRLKQSHEETLPKREREEIRGGMRAGRVPEEKAWAAQSRGKDEYRNSDQHSKDVRHADHIRRRDRVENESPSRLRTREDERRARHDRVNSREDRAPIASDNSRVNEKRHKDYLKKGKEFESDHNSQMALNMNEDELN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="-" PGL_start="84077" PGL_stop="83092"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="84077" e_stop="84054"/>
            <exon e_start="83942" e_stop="83805"/>
            <exon e_start="83322" e_stop="83092"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.809" acc_prob="1.000" e_score="0.917"/>
          <exon-intron don_prob="0.988" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.917">
            <gDNA_exon_boundary e_start="84077" e_stop="84054" e_length="24"/>
          </exon>
          <intron i_serial="1" don_prob="0.809" acc_prob="1.000">
            <gDNA_intron_boundary i_start="84053" i_stop="83943" i_length="111"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="83942" e_stop="83805" e_length="138"/>
          </exon>
          <intron i_serial="2" don_prob="0.988" acc_prob="1.000">
            <gDNA_intron_boundary i_start="83804" i_stop="83323" i_length="482"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="83322" e_stop="83092" e_length="231"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84077" stop="84054"/>
              <exon start="83942" stop="83805"/>
              <exon start="83322" stop="83092"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U601524" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TATGAAACTGTGAGGACAGAGCAG : GAATATGATCCAGAAATGCCCCCAGAACTTGCAGCAGCAGCTGGTATGAAAGACATTCCATCGGAAAATTTGAATGGTAAAATTGATGGAACTACAAATGACCTAGGAAGAGGATCAATGCGCATGAGACCACCACTA : ATTGTGTGCCAGGATGATGACCAATACACAGGGAATGACAAGAATGAAGGGCAATTGGACAATATTCCTTCAACAGAGGATTTTAGAGGTGATGCAAGAAGAGGACCCCTGCAGGAACATGTTCAAGAATCTGATGGTTTTCAGAATCCTTATAAGAGCCACAGGCGAGAGGCCAATGCTAGGAGAACACAGTTTATAAACCCTATAGGTGATCATTTAACCAAAGGAGAT</gDNA_template>
            <first_frame> Y  E  T  V  R  T  E  Q  :  E  Y  D  P  E  M  P  P  E  L  A  A  A  A  G  M  K  D  I  P  S  E  N  L  N  G  K  I  D  G  T  T  N  D  L  G  R  G  S  M  R  M  R  P  P  L  :  I  V  C  Q  D  D  D  Q  Y  T  G  N  D  K  N  E  G  Q  L  D  N  I  P  S  T  E  D  F  R  G  D  A  R  R  G  P  L  Q  E  H  V  Q  E  S  D  G  F  Q  N  P  Y  K  S  H  R  R  E  A  N  A  R  R  T  Q  F  I  N  P  I  G  D  H  L  T  K  G  D </first_frame>
            <second_frame>  M  K  L  *  G  Q  S  R :   N  M  I  Q  K  C  P  Q  N  L  Q  Q  Q  L  V  *  K  T  F  H  R  K  I  *  M  V  K  L  M  E  L  Q  M  T  *  E  E  D  Q  C  A  *  D  H  H  * :   L  C  A  R  M  M  T  N  T  Q  G  M  T  R  M  K  G  N  W  T  I  F  L  Q  Q  R  I  L  E  V  M  Q  E  E  D  P  C  R  N  M  F  K  N  L  M  V  F  R  I  L  I  R  A  T  G  E  R  P  M  L  G  E  H  S  L  *  T  L  *  V  I  I  *  P  K  E   </second_frame>
            <third_frame>   *  N  C  E  D  R  A   : G  I  *  S  R  N  A  P  R  T  C  S  S  S  W  Y  E  R  H  S  I  G  K  F  E  W  *  N  *  W  N  Y  K  *  P  R  K  R  I  N  A  H  E  T  T  T   : N  C  V  P  G  *  *  P  I  H  R  E  *  Q  E  *  R  A  I  G  Q  Y  S  F  N  R  G  F  *  R  *  C  K  K  R  T  P  A  G  T  C  S  R  I  *  W  F  S  E  S  L  *  E  P  Q  A  R  G  Q  C  *  E  N  T  V  Y  K  P  Y  R  *  S  F  N  Q  R  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="-"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="84077" stop="84054"/>
                    <exon start="83942" stop="83805"/>
                    <exon start="83322" stop="83092"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>393</number_coding_nucleotides>
                  <number_encoded_amino_acids>131</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YETVRTEQEYDPEMPPELAAAAGMKDIPSENLNGKIDGTTNDLGRGSMRMRPPLIVCQDDDQYTGNDKNEGQLDNIPSTEDFRGDARRGPLQEHVQESDGFQNPYKSHRREANARRTQFINPIGDHLTKGD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="-" PGL_start="88754" PGL_stop="87532"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="88754" e_stop="87532"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.984"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.984">
            <gDNA_exon_boundary e_start="88754" e_stop="87532" e_length="1223"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88754" stop="87532"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U577770" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTAAGAAGCCCTCAAAACCCTCTCTTTATTGCGTCTTTCTCCGGAAGTACTCGCAGTTCTCTCTCTAATCGATAATGGAGGACGACGATGAATTCGGAGATCTCTACACCGATGTACTCCGCCCCTTAACGGCGTCGTTTCAGTCTCAGCAGCAGCCGGTAGCGCAAGAAGAAGCTGCGCCCAAAGCCGCCGGGGCTACGAGCCGGCCGATCGATCTGAACATCAACAGCGATGATGAGGAGATTTTATACGGAGCTCCGAATTCGAATTCGAAACCGAATTTTGCTGGGCCGAGTGCTATTACTGGTCAGGAAAAAACCCTAGCTTCTCCGCTAGATGTTAAATCCGGGTCGAGGTTACCCGAATCCAATCTGTATTTAAAACTTGGAGCTGGAAGAATGGAGGGTTTGGGTGGAATTAATGAATCGGATTCGACAGCTAGGGTTTTGGTTGAGAGTGAGGATGTGAAATTAGCTAAAACGGAGTTTCAAGATTTGAATTTTATGGATGAAGCTAATATTGATATTGTAGTGGAAGAGACGGATGATAAAGATGATATTTTGGTGGGGAATCATCAAAACGTAGGTGAAGACCATGAGAATCTGAAGGATGGGACTGGAAATGCAGGGAATTTCGTGATTGAAGCTTCTGGTGCCGAGCAGTTGATTCCTGGGCTGGCGATTCCGGGTGTTTCAGGTGGGGCGGGGAATACTGGAGAAGGTACTTTTGAGGATGATTGGGATAGTGATAGTGAGGATGATTTGCAGATTGTGTTAAATGACAACACTCATGGACCAATGGGCATGGAGAGAATGGGTATTGGTGAAGAGGACGATGAAGATGAAGATCCTTTGGTTATTGTTGCTGATAATGATGGCCCAAGCCATCCACCAATGATGGAGGAGCAAGATTGGGGTGAAGAGGGGGGTCCTGCCGCTAATGGAGAGAGAAAGGAGATATTAGATGCACTAAAAGTGAATGGAGCACCTGGAGTAGCAGGAAAGGTTGGGTACCCCAATCATGCATACAATCATCCGTATCATTCCCAGTATAAGGTCAGTGATGTTGTACCTCTGGGGGTTTGTGTTCTTCCCATATTGTTTGATCAGAACATGCAATGTAAGCTGACTTGTAATTTTCTTATGGTTTTGTGGTCATTGGTGATGTTAAGGCCGATGGCTCTCATTGTATGCACAAGCTGTATAAAGAATTGTACTGATGAT</gDNA_template>
            <first_frame> L  R  S  P  Q  N  P  L  F  I  A  S  F  S  G  S  T  R  S  S  L  S  N  R  *  W  R  T  T  M  N  S  E  I  S  T  P  M  Y  S  A  P  *  R  R  R  F  S  L  S  S  S  R  *  R  K  K  K  L  R  P  K  P  P  G  L  R  A  G  R  S  I  *  T  S  T  A  M  M  R  R  F  Y  T  E  L  R  I  R  I  R  N  R  I  L  L  G  R  V  L  L  L  V  R  K  K  P  *  L  L  R  *  M  L  N  P  G  R  G  Y  P  N  P  I  C  I  *  N  L  E  L  E  E  W  R  V  W  V  E  L  M  N  R  I  R  Q  L  G  F  W  L  R  V  R  M  *  N  *  L  K  R  S  F  K  I  *  I  L  W  M  K  L  I  L  I  L  *  W  K  R  R  M  I  K  M  I  F  W  W  G  I  I  K  T  *  V  K  T  M  R  I  *  R  M  G  L  E  M  Q  G  I  S  *  L  K  L  L  V  P  S  S  *  F  L  G  W  R  F  R  V  F  Q  V  G  R  G  I  L  E  K  V  L  L  R  M  I  G  I  V  I  V  R  M  I  C  R  L  C  *  M  T  T  L  M  D  Q  W  A  W  R  E  W  V  L  V  K  R  T  M  K  M  K  I  L  W  L  L  L  L  I  M  M  A  Q  A  I  H  Q  *  W  R  S  K  I  G  V  K  R  G  V  L  P  L  M  E  R  E  R  R  Y  *  M  H  *  K  *  M  E  H  L  E  *  Q  E  R  L  G  T  P  I  M  H  T  I  I  R  I  I  P  S  I  R  S  V  M  L  Y  L  W  G  F  V  F  F  P  Y  C  L  I  R  T  C  N  V  S  *  L  V  I  F  L  W  F  C  G  H  W  *  C  *  G  R  W  L  S  L  Y  A  Q  A  V  *  R  I  V  L  M   </first_frame>
            <second_frame>  *  E  A  L  K  T  L  S  L  L  R  L  S  P  E  V  L  A  V  L  S  L  I  D  N  G  G  R  R  *  I  R  R  S  L  H  R  C  T  P  P  L  N  G  V  V  S  V  S  A  A  A  G  S  A  R  R  S  C  A  Q  S  R  R  G  Y  E  P  A  D  R  S  E  H  Q  Q  R  *  *  G  D  F  I  R  S  S  E  F  E  F  E  T  E  F  C  W  A  E  C  Y  Y  W  S  G  K  N  P  S  F  S  A  R  C  *  I  R  V  E  V  T  R  I  Q  S  V  F  K  T  W  S  W  K  N  G  G  F  G  W  N  *  *  I  G  F  D  S  *  G  F  G  *  E  *  G  C  E  I  S  *  N  G  V  S  R  F  E  F  Y  G  *  S  *  Y  *  Y  C  S  G  R  D  G  *  *  R  *  Y  F  G  G  E  S  S  K  R  R  *  R  P  *  E  S  E  G  W  D  W  K  C  R  E  F  R  D  *  S  F  W  C  R  A  V  D  S  W  A  G  D  S  G  C  F  R  W  G  G  E  Y  W  R  R  Y  F  *  G  *  L  G  *  *  *  *  G  *  F  A  D  C  V  K  *  Q  H  S  W  T  N  G  H  G  E  N  G  Y  W  *  R  G  R  *  R  *  R  S  F  G  Y  C  C  *  *  *  W  P  K  P  S  T  N  D  G  G  A  R  L  G  *  R  G  G  S  C  R  *  W  R  E  K  G  D  I  R  C  T  K  S  E  W  S  T  W  S  S  R  K  G  W  V  P  Q  S  C  I  Q  S  S  V  S  F  P  V  *  G  Q  *  C  C  T  S  G  G  L  C  S  S  H  I  V  *  S  E  H  A  M  *  A  D  L  *  F  S  Y  G  F  V  V  I  G  D  V  K  A  D  G  S  H  C  M  H  K  L  Y  K  E  L  Y  *  *  </second_frame>
            <third_frame>   K  K  P  S  K  P  S  L  Y  C  V  F  L  R  K  Y  S  Q  F  S  L  *  S  I  M  E  D  D  D  E  F  G  D  L  Y  T  D  V  L  R  P  L  T  A  S  F  Q  S  Q  Q  Q  P  V  A  Q  E  E  A  A  P  K  A  A  G  A  T  S  R  P  I  D  L  N  I  N  S  D  D  E  E  I  L  Y  G  A  P  N  S  N  S  K  P  N  F  A  G  P  S  A  I  T  G  Q  E  K  T  L  A  S  P  L  D  V  K  S  G  S  R  L  P  E  S  N  L  Y  L  K  L  G  A  G  R  M  E  G  L  G  G  I  N  E  S  D  S  T  A  R  V  L  V  E  S  E  D  V  K  L  A  K  T  E  F  Q  D  L  N  F  M  D  E  A  N  I  D  I  V  V  E  E  T  D  D  K  D  D  I  L  V  G  N  H  Q  N  V  G  E  D  H  E  N  L  K  D  G  T  G  N  A  G  N  F  V  I  E  A  S  G  A  E  Q  L  I  P  G  L  A  I  P  G  V  S  G  G  A  G  N  T  G  E  G  T  F  E  D  D  W  D  S  D  S  E  D  D  L  Q  I  V  L  N  D  N  T  H  G  P  M  G  M  E  R  M  G  I  G  E  E  D  D  E  D  E  D  P  L  V  I  V  A  D  N  D  G  P  S  H  P  P  M  M  E  E  Q  D  W  G  E  E  G  G  P  A  A  N  G  E  R  K  E  I  L  D  A  L  K  V  N  G  A  P  G  V  A  G  K  V  G  Y  P  N  H  A  Y  N  H  P  Y  H  S  Q  Y  K  V  S  D  V  V  P  L  G  V  C  V  L  P  I  L  F  D  Q  N  M  Q  C  K  L  T  C  N  F  L  M  V  L  W  S  L  V  M  L  R  P  M  A  L  I  V  C  T  S  C  I  K  N  C  T  D  D </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="-"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88686" stop="87532"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1155</number_coding_nucleotides>
                  <number_encoded_amino_acids>385</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SIMEDDDEFGDLYTDVLRPLTASFQSQQQPVAQEEAAPKAAGATSRPIDLNINSDDEEILYGAPNSNSKPNFAGPSAITGQEKTLASPLDVKSGSRLPESNLYLKLGAGRMEGLGGINESDSTARVLVESEDVKLAKTEFQDLNFMDEANIDIVVEETDDKDDILVGNHQNVGEDHENLKDGTGNAGNFVIEASGAEQLIPGLAIPGVSGGAGNTGEGTFEDDWDSDSEDDLQIVLNDNTHGPMGMERMGIGEEDDEDEDPLVIVADNDGPSHPPMMEEQDWGEEGGPAANGERKEILDALKVNGAPGVAGKVGYPNHAYNHPYHSQYKVSDVVPLGVCVLPILFDQNMQCKLTCNFLMVLWSLVMLRPMALIVCTSCIKNCTDD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="-" PGL_start="93496" PGL_stop="90114"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="93496" e_stop="92593"/>
            <exon e_start="90616" e_stop="90508"/>
            <exon e_start="90407" e_stop="90296"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.967"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="0.936"/>
          <exon-only e_score="0.866"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.967">
            <gDNA_exon_boundary e_start="93496" e_stop="92593" e_length="904"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="92592" i_stop="90617" i_length="1976"/>
          </intron>
          <exon e_serial="2" e_score="0.936">
            <gDNA_exon_boundary e_start="90616" e_stop="90508" e_length="109"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="90507" i_stop="90408" i_length="100"/>
          </intron>
          <exon e_serial="3" e_score="0.866">
            <gDNA_exon_boundary e_start="90407" e_stop="90296" e_length="112"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93496" stop="92593"/>
              <exon start="90616" stop="90508"/>
              <exon start="90407" stop="90296"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584503" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGAAATCTAGAGGTCTCTATTCTCTTTCCTTTTGGTCAAAATAGTCCAAATTTCAAATTGGACTATTCTTCTTCATATATATAAATAAATCATCTATCTCTGCATCAACCATATCAACCATGATAAGCAAAACTTCTTTTGTGCTATTTCTCATTGCTATTGCTCTTTTTCTTCATGATGTAACTTCTATAGGTGTTAATTACGGGACTCTCGGAAACAACCTCCCTCCGCCAGCTCAAGTGGCTCAGTTCATCAAGGATAAAACGGTCATAGACCGTGTAAAGATTTTCGATATCAACCCTGACATCCTCCGTGCTTTTGCAAACACAGGAATCTCGCTAACAGTCACAGTACCAAACGGCGAGATCCCGAATCTACTGGATCTCGCCTATGCTCGACGATACGTCGAGCAGAATATCAAACCTCATTACCCACAGACAAAGATGGATGTTATTCTAGTGGGTAATGAGGTTCTTCACTGGGATACACCTGAGGTACAGAACAAGCTTGTTCCAGCTATGAAAGTTTTTTACCAAGCTTTGGGTTTATCTGGGTTGAAGGGTATAAAAGTCTCTTCAGCTCATTCGTTGGGTATTCTACTCCGTTCTAACCCACCCAGTGCAGCCCGGTTTCGACCCGGTTGGGATGTGGGTATTCTAGCTCCGATGCTACAATTTCTTCGTGAAACAAAAGGTCCTTTCATGGTAAATCCCTATCCCTACTTCGGATACAACAAGAAACAAGAGGATTTTCTTCTATTTAGAAAGAATAAAGGGGTTTACGATAGATTTTCGAAGAAATGGTATACGAATTCTTTTGATATGTTGTTGGATGCGGTGTATATGTCGATGGTGAGATTGAAGCATTCAGATGTGGAGATTGTTGCTGCTGAGACAGGGTGGC : ATCCGATCTCACGCAGCCTTTGCCATGAACTCGTACTATCAAAAGGAAGGTCGAAACAACTTCAATTGTGACTTTGCTGGTACTGGTGTAGTCGCCTTCTCCGATCCAA : GTTATGGAACATGCAAATTTGAATCTTGAATGTACGTGAAGCTAAGGATGATAGCTAGTATTGACTTGTAATATTTATGAATGTTATGTACTTTGGTTTCACATATATAATC</gDNA_template>
            <first_frame> K  K  S  R  G  L  Y  S  L  S  F  W  S  K  *  S  K  F  Q  I  G  L  F  F  F  I  Y  I  N  K  S  S  I  S  A  S  T  I  S  T  M  I  S  K  T  S  F  V  L  F  L  I  A  I  A  L  F  L  H  D  V  T  S  I  G  V  N  Y  G  T  L  G  N  N  L  P  P  P  A  Q  V  A  Q  F  I  K  D  K  T  V  I  D  R  V  K  I  F  D  I  N  P  D  I  L  R  A  F  A  N  T  G  I  S  L  T  V  T  V  P  N  G  E  I  P  N  L  L  D  L  A  Y  A  R  R  Y  V  E  Q  N  I  K  P  H  Y  P  Q  T  K  M  D  V  I  L  V  G  N  E  V  L  H  W  D  T  P  E  V  Q  N  K  L  V  P  A  M  K  V  F  Y  Q  A  L  G  L  S  G  L  K  G  I  K  V  S  S  A  H  S  L  G  I  L  L  R  S  N  P  P  S  A  A  R  F  R  P  G  W  D  V  G  I  L  A  P  M  L  Q  F  L  R  E  T  K  G  P  F  M  V  N  P  Y  P  Y  F  G  Y  N  K  K  Q  E  D  F  L  L  F  R  K  N  K  G  V  Y  D  R  F  S  K  K  W  Y  T  N  S  F  D  M  L  L  D  A  V  Y  M  S  M  V  R  L  K  H  S  D  V  E  I  V  A  A  E  T  G  W   : H  P  I  S  R  S  L  C  H  E  L  V  L  S  K  G  R  S  K  Q  L  Q  L  *  L  C  W  Y  W  C  S  R  L  L  R  S  K :   L  W  N  M  Q  I  *  I  L  N  V  R  E  A  K  D  D  S  *  Y  *  L  V  I  F  M  N  V  M  Y  F  G  F  T  Y  I  I </first_frame>
            <second_frame>  R  N  L  E  V  S  I  L  F  P  F  G  Q  N  S  P  N  F  K  L  D  Y  S  S  S  Y  I  *  I  N  H  L  S  L  H  Q  P  Y  Q  P  *  *  A  K  L  L  L  C  Y  F  S  L  L  L  L  F  F  F  M  M  *  L  L  *  V  L  I  T  G  L  S  E  T  T  S  L  R  Q  L  K  W  L  S  S  S  R  I  K  R  S  *  T  V  *  R  F  S  I  S  T  L  T  S  S  V  L  L  Q  T  Q  E  S  R  *  Q  S  Q  Y  Q  T  A  R  S  R  I  Y  W  I  S  P  M  L  D  D  T  S  S  R  I  S  N  L  I  T  H  R  Q  R  W  M  L  F  *  W  V  M  R  F  F  T  G  I  H  L  R  Y  R  T  S  L  F  Q  L  *  K  F  F  T  K  L  W  V  Y  L  G  *  R  V  *  K  S  L  Q  L  I  R  W  V  F  Y  S  V  L  T  H  P  V  Q  P  G  F  D  P  V  G  M  W  V  F  *  L  R  C  Y  N  F  F  V  K  Q  K  V  L  S  W  *  I  P  I  P  T  S  D  T  T  R  N  K  R  I  F  F  Y  L  E  R  I  K  G  F  T  I  D  F  R  R  N  G  I  R  I  L  L  I  C  C  W  M  R  C  I  C  R  W  *  D  *  S  I  Q  M  W  R  L  L  L  L  R  Q  G  G  :  I  R  S  H  A  A  F  A  M  N  S  Y  Y  Q  K  E  G  R  N  N  F  N  C  D  F  A  G  T  G  V  V  A  F  S  D  P   : S  Y  G  T  C  K  F  E  S  *  M  Y  V  K  L  R  M  I  A  S  I  D  L  *  Y  L  *  M  L  C  T  L  V  S  H  I  *   </second_frame>
            <third_frame>   E  I  *  R  S  L  F  S  F  L  L  V  K  I  V  Q  I  S  N  W  T  I  L  L  H  I  Y  K  *  I  I  Y  L  C  I  N  H  I  N  H  D  K  Q  N  F  F  C  A  I  S  H  C  Y  C  S  F  S  S  *  C  N  F  Y  R  C  *  L  R  D  S  R  K  Q  P  P  S  A  S  S  S  G  S  V  H  Q  G  *  N  G  H  R  P  C  K  D  F  R  Y  Q  P  *  H  P  P  C  F  C  K  H  R  N  L  A  N  S  H  S  T  K  R  R  D  P  E  S  T  G  S  R  L  C  S  T  I  R  R  A  E  Y  Q  T  S  L  P  T  D  K  D  G  C  Y  S  S  G  *  *  G  S  S  L  G  Y  T  *  G  T  E  Q  A  C  S  S  Y  E  S  F  L  P  S  F  G  F  I  W  V  E  G  Y  K  S  L  F  S  S  F  V  G  Y  S  T  P  F  *  P  T  Q  C  S  P  V  S  T  R  L  G  C  G  Y  S  S  S  D  A  T  I  S  S  *  N  K  R  S  F  H  G  K  S  L  S  L  L  R  I  Q  Q  E  T  R  G  F  S  S  I  *  K  E  *  R  G  L  R  *  I  F  E  E  M  V  Y  E  F  F  *  Y  V  V  G  C  G  V  Y  V  D  G  E  I  E  A  F  R  C  G  D  C  C  C  *  D  R  V  A :   S  D  L  T  Q  P  L  P  *  T  R  T  I  K  R  K  V  E  T  T  S  I  V  T  L  L  V  L  V  *  S  P  S  P  I  Q  :  V  M  E  H  A  N  L  N  L  E  C  T  *  S  *  G  *  *  L  V  L  T  C  N  I  Y  E  C  Y  V  L  W  F  H  I  Y  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="-"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="93451" stop="92593"/>
                    <exon start="90616" stop="90546"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>927</number_coding_nucleotides>
                  <number_encoded_amino_acids>309</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SKFQIGLFFFIYINKSSISASTISTMISKTSFVLFLIAIALFLHDVTSIGVNYGTLGNNLPPPAQVAQFIKDKTVIDRVKIFDINPDILRAFANTGISLTVTVPNGEIPNLLDLAYARRYVEQNIKPHYPQTKMDVILVGNEVLHWDTPEVQNKLVPAMKVFYQALGLSGLKGIKVSSAHSLGILLRSNPPSAARFRPGWDVGILAPMLQFLRETKGPFMVNPYPYFGYNKKQEDFLLFRKNKGVYDRFSKKWYTNSFDMLLDAVYMSMVRLKHSDVEIVAAETGWHPISRSLCHELVLSKGRSKQLQL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="93482" e_stop="92345"/>
            <exon e_start="90826" e_stop="90508"/>
            <exon e_start="90407" e_stop="90114"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="0.998"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="93482" e_stop="92345" e_length="1138"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="92344" i_stop="90827" i_length="1518"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="90826" e_stop="90508" e_length="319"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="90507" i_stop="90408" i_length="100"/>
          </intron>
          <exon e_serial="3" e_score="0.993">
            <gDNA_exon_boundary e_start="90407" e_stop="90114" e_length="294"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93482" stop="92345"/>
              <exon start="90826" stop="90508"/>
              <exon start="90407" stop="90114"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584502" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTCTATTCTCTTTCCTTTTGGTCAAAATAGTCCAAATTTCAAATTGGACTATTCTTCTTCATATATATAAATAAATCATCTATCTCTGCATCAACCATATCAACCATGATAAGCAAAACTTCTTTTGTGCTATTTCTCATTGCTATTGCTCTTTTTCTTCATGATGTAACTTCTATAGGTGTTAATTACGGGACTCTCGGAAACAACCTCCCTCCGCCAGCTCAAGTGGCTCAGTTCATCAAGGATAAAACGGTCATAGACCGTGTAAAGATTTTCGATATCAACCCTGACATCCTCCGTGCTTTTGCAAACACAGGAATCTCGCTAACAGTCACAGTACCAAACGGCGAGATCCCGAATCTACTGGATCTCGCCTATGCTCGACGATACGTCGAGCAGAATATCAAACCTCATTACCCACAGACAAAGATGGATGTTATTCTAGTGGGTAATGAGGTTCTTCACTGGGATACACCTGAGGTACAGAACAAGCTTGTTCCAGCTATGAAAGTTTTTTACCAAGCTTTGGGTTTATCTGGGTTGAAGGGTATAAAAGTCTCTTCAGCTCATTCGTTGGGTATTCTACTCCGTTCTAACCCACCCAGTGCAGCCCGGTTTCGACCCGGTTGGGATGTGGGTATTCTAGCTCCGATGCTACAATTTCTTCGTGAAACAAAAGGTCCTTTCATGGTAAATCCCTATCCCTACTTCGGATACAACAAGAAACAAGAGGATTTTCTTCTATTTAGAAAGAATAAAGGGGTTTACGATAGATTTTCGAAGAAATGGTATACGAATTCTTTTGATATGTTGTTGGATGCGGTGTATATGTCGATGGTGAGATTGAAGCATTCAGATGTGGAGATTGTTGCTGCTGAGACAGGGTGGCCTTCGCAAGGAGAAGCGTATGAACCGCAATGTACTGTGGAAAATGCAGCTTCGTATAATGGTGGATTGATGAAGAAATATAATTCCGGGATCGGTACGCCATTGATGCCGCACAGGAAGATCGAGACCTACATTTTTTCATTGTTCAATGAGAACACCAAACCCGGATCCATCGCTGAGAGGAACTTCGGGTTGTTCCGACCCGATTTCACTCCGGTTTATGATGTCGGAGTTTTGAAAAGCAACCAG : GCTCACCCAACACCTTCATTGCCCCCACCAAAAACCGGTGGCGGAGGCAATAAAGGTCAACCAAAAACACCAGCAGAGAACAAAAAATTCTGCATGCCAAAGGTTGAGGCAACTGATGCACAACTACAATCCAACATTAACTATGTGTGCAGTCAGGGAGTTGACTGCACACCAATTCAAGTGGGTGGTTCCTGCTTTAAACCCAACACTATCCGATCTCACGCAGCCTTTGCCATGAACTCGTACTATCAAAAGGAAGGTCGAAACAACTTCAATTGTGACTTTGCTGGTACTGGTGTAGTCGCCTTCTCCGATCCAA : GTTATGGAACATGCAAATTTGAATCTTGAATGTACGTGAAGCTAAGGATGATAGCTAGTATTGACTTGTAATATTTATGAATGTTATGTACTTTGGTTTCACATATATAATCTAATTGTATTGGTTTGGTATGTAAACGTTCTTTTTATATACTATGTCATTTAATGTGCCTCATTTATTAATTTCTCTTTTCCATTTGTTTTCAATTTTATCAAGTCATCTTAAATATAGAAAAATACATATTTAAAAATAATTACTAATTTTAGCGATATTTTTTGTTTATTACTATTTATA</gDNA_template>
            <first_frame> S  L  F  S  F  L  L  V  K  I  V  Q  I  S  N  W  T  I  L  L  H  I  Y  K  *  I  I  Y  L  C  I  N  H  I  N  H  D  K  Q  N  F  F  C  A  I  S  H  C  Y  C  S  F  S  S  *  C  N  F  Y  R  C  *  L  R  D  S  R  K  Q  P  P  S  A  S  S  S  G  S  V  H  Q  G  *  N  G  H  R  P  C  K  D  F  R  Y  Q  P  *  H  P  P  C  F  C  K  H  R  N  L  A  N  S  H  S  T  K  R  R  D  P  E  S  T  G  S  R  L  C  S  T  I  R  R  A  E  Y  Q  T  S  L  P  T  D  K  D  G  C  Y  S  S  G  *  *  G  S  S  L  G  Y  T  *  G  T  E  Q  A  C  S  S  Y  E  S  F  L  P  S  F  G  F  I  W  V  E  G  Y  K  S  L  F  S  S  F  V  G  Y  S  T  P  F  *  P  T  Q  C  S  P  V  S  T  R  L  G  C  G  Y  S  S  S  D  A  T  I  S  S  *  N  K  R  S  F  H  G  K  S  L  S  L  L  R  I  Q  Q  E  T  R  G  F  S  S  I  *  K  E  *  R  G  L  R  *  I  F  E  E  M  V  Y  E  F  F  *  Y  V  V  G  C  G  V  Y  V  D  G  E  I  E  A  F  R  C  G  D  C  C  C  *  D  R  V  A  F  A  R  R  S  V  *  T  A  M  Y  C  G  K  C  S  F  V  *  W  W  I  D  E  E  I  *  F  R  D  R  Y  A  I  D  A  A  Q  E  D  R  D  L  H  F  F  I  V  Q  *  E  H  Q  T  R  I  H  R  *  E  E  L  R  V  V  P  T  R  F  H  S  G  L  *  C  R  S  F  E  K  Q  P   : G  S  P  N  T  F  I  A  P  T  K  N  R  W  R  R  Q  *  R  S  T  K  N  T  S  R  E  Q  K  I  L  H  A  K  G  *  G  N  *  C  T  T  T  I  Q  H  *  L  C  V  Q  S  G  S  *  L  H  T  N  S  S  G  W  F  L  L  *  T  Q  H  Y  P  I  S  R  S  L  C  H  E  L  V  L  S  K  G  R  S  K  Q  L  Q  L  *  L  C  W  Y  W  C  S  R  L  L  R  S  K :   L  W  N  M  Q  I  *  I  L  N  V  R  E  A  K  D  D  S  *  Y  *  L  V  I  F  M  N  V  M  Y  F  G  F  T  Y  I  I  *  L  Y  W  F  G  M  *  T  F  F  L  Y  T  M  S  F  N  V  P  H  L  L  I  S  L  F  H  L  F  S  I  L  S  S  H  L  K  Y  R  K  I  H  I  *  K  *  L  L  I  L  A  I  F  F  V  Y  Y  Y  L   </first_frame>
            <second_frame>  L  Y  S  L  S  F  W  S  K  *  S  K  F  Q  I  G  L  F  F  F  I  Y  I  N  K  S  S  I  S  A  S  T  I  S  T  M  I  S  K  T  S  F  V  L  F  L  I  A  I  A  L  F  L  H  D  V  T  S  I  G  V  N  Y  G  T  L  G  N  N  L  P  P  P  A  Q  V  A  Q  F  I  K  D  K  T  V  I  D  R  V  K  I  F  D  I  N  P  D  I  L  R  A  F  A  N  T  G  I  S  L  T  V  T  V  P  N  G  E  I  P  N  L  L  D  L  A  Y  A  R  R  Y  V  E  Q  N  I  K  P  H  Y  P  Q  T  K  M  D  V  I  L  V  G  N  E  V  L  H  W  D  T  P  E  V  Q  N  K  L  V  P  A  M  K  V  F  Y  Q  A  L  G  L  S  G  L  K  G  I  K  V  S  S  A  H  S  L  G  I  L  L  R  S  N  P  P  S  A  A  R  F  R  P  G  W  D  V  G  I  L  A  P  M  L  Q  F  L  R  E  T  K  G  P  F  M  V  N  P  Y  P  Y  F  G  Y  N  K  K  Q  E  D  F  L  L  F  R  K  N  K  G  V  Y  D  R  F  S  K  K  W  Y  T  N  S  F  D  M  L  L  D  A  V  Y  M  S  M  V  R  L  K  H  S  D  V  E  I  V  A  A  E  T  G  W  P  S  Q  G  E  A  Y  E  P  Q  C  T  V  E  N  A  A  S  Y  N  G  G  L  M  K  K  Y  N  S  G  I  G  T  P  L  M  P  H  R  K  I  E  T  Y  I  F  S  L  F  N  E  N  T  K  P  G  S  I  A  E  R  N  F  G  L  F  R  P  D  F  T  P  V  Y  D  V  G  V  L  K  S  N  Q  :  A  H  P  T  P  S  L  P  P  P  K  T  G  G  G  G  N  K  G  Q  P  K  T  P  A  E  N  K  K  F  C  M  P  K  V  E  A  T  D  A  Q  L  Q  S  N  I  N  Y  V  C  S  Q  G  V  D  C  T  P  I  Q  V  G  G  S  C  F  K  P  N  T  I  R  S  H  A  A  F  A  M  N  S  Y  Y  Q  K  E  G  R  N  N  F  N  C  D  F  A  G  T  G  V  V  A  F  S  D  P   : S  Y  G  T  C  K  F  E  S  *  M  Y  V  K  L  R  M  I  A  S  I  D  L  *  Y  L  *  M  L  C  T  L  V  S  H  I  *  S  N  C  I  G  L  V  C  K  R  S  F  Y  I  L  C  H  L  M  C  L  I  Y  *  F  L  F  S  I  C  F  Q  F  Y  Q  V  I  L  N  I  E  K  Y  I  F  K  N  N  Y  *  F  *  R  Y  F  L  F  I  T  I  Y  </second_frame>
            <third_frame>   S  I  L  F  P  F  G  Q  N  S  P  N  F  K  L  D  Y  S  S  S  Y  I  *  I  N  H  L  S  L  H  Q  P  Y  Q  P  *  *  A  K  L  L  L  C  Y  F  S  L  L  L  L  F  F  F  M  M  *  L  L  *  V  L  I  T  G  L  S  E  T  T  S  L  R  Q  L  K  W  L  S  S  S  R  I  K  R  S  *  T  V  *  R  F  S  I  S  T  L  T  S  S  V  L  L  Q  T  Q  E  S  R  *  Q  S  Q  Y  Q  T  A  R  S  R  I  Y  W  I  S  P  M  L  D  D  T  S  S  R  I  S  N  L  I  T  H  R  Q  R  W  M  L  F  *  W  V  M  R  F  F  T  G  I  H  L  R  Y  R  T  S  L  F  Q  L  *  K  F  F  T  K  L  W  V  Y  L  G  *  R  V  *  K  S  L  Q  L  I  R  W  V  F  Y  S  V  L  T  H  P  V  Q  P  G  F  D  P  V  G  M  W  V  F  *  L  R  C  Y  N  F  F  V  K  Q  K  V  L  S  W  *  I  P  I  P  T  S  D  T  T  R  N  K  R  I  F  F  Y  L  E  R  I  K  G  F  T  I  D  F  R  R  N  G  I  R  I  L  L  I  C  C  W  M  R  C  I  C  R  W  *  D  *  S  I  Q  M  W  R  L  L  L  L  R  Q  G  G  L  R  K  E  K  R  M  N  R  N  V  L  W  K  M  Q  L  R  I  M  V  D  *  *  R  N  I  I  P  G  S  V  R  H  *  C  R  T  G  R  S  R  P  T  F  F  H  C  S  M  R  T  P  N  P  D  P  S  L  R  G  T  S  G  C  S  D  P  I  S  L  R  F  M  M  S  E  F  *  K  A  T  R :   L  T  Q  H  L  H  C  P  H  Q  K  P  V  A  E  A  I  K  V  N  Q  K  H  Q  Q  R  T  K  N  S  A  C  Q  R  L  R  Q  L  M  H  N  Y  N  P  T  L  T  M  C  A  V  R  E  L  T  A  H  Q  F  K  W  V  V  P  A  L  N  P  T  L  S  D  L  T  Q  P  L  P  *  T  R  T  I  K  R  K  V  E  T  T  S  I  V  T  L  L  V  L  V  *  S  P  S  P  I  Q  :  V  M  E  H  A  N  L  N  L  E  C  T  *  S  *  G  *  *  L  V  L  T  C  N  I  Y  E  C  Y  V  L  W  F  H  I  Y  N  L  I  V  L  V  W  Y  V  N  V  L  F  I  Y  Y  V  I  *  C  A  S  F  I  N  F  S  F  P  F  V  F  N  F  I  K  S  S  *  I  *  K  N  T  Y  L  K  I  I  T  N  F  S  D  I  F  C  L  L  L  F  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="-"/>
                <serials PGL_serial="20" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="93451" stop="92345"/>
                    <exon start="90826" stop="90508"/>
                    <exon start="90407" stop="90379"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1452</number_coding_nucleotides>
                  <number_encoded_amino_acids>484</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SKFQIGLFFFIYINKSSISASTISTMISKTSFVLFLIAIALFLHDVTSIGVNYGTLGNNLPPPAQVAQFIKDKTVIDRVKIFDINPDILRAFANTGISLTVTVPNGEIPNLLDLAYARRYVEQNIKPHYPQTKMDVILVGNEVLHWDTPEVQNKLVPAMKVFYQALGLSGLKGIKVSSAHSLGILLRSNPPSAARFRPGWDVGILAPMLQFLRETKGPFMVNPYPYFGYNKKQEDFLLFRKNKGVYDRFSKKWYTNSFDMLLDAVYMSMVRLKHSDVEIVAAETGWPSQGEAYEPQCTVENAASYNGGLMKKYNSGIGTPLMPHRKIETYIFSLFNENTKPGSIAERNFGLFRPDFTPVYDVGVLKSNQAHPTPSLPPPKTGGGGNKGQPKTPAENKKFCMPKVEATDAQLQSNINYVCSQGVDCTPIQVGGSCFKPNTIRSHAAFAMNSYYQKEGRNNFNCDFAGTGVVAFSDPSYGTCKFES*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="21" PGL_strand="-" PGL_start="96653" PGL_stop="95080"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="96653" e_stop="95080"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.985"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.985">
            <gDNA_exon_boundary e_start="96653" e_stop="95080" e_length="1574"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96653" stop="95080"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U568578" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96480" stop="96297"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596160" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGAATACGATAAAATTACAATCTTTTTCCCCTTTCGAGAACCAGAGCTCTTCGATTTCTCTTCAATTCAGGTATTCTTTTTTAAATTTCTCTTCGATTTCAATTCATAAACCCTAATAATGGAACCCCAAATGCGCAATTTCCCAGTTTTTATACAATCGCCAGAGCTTCAGATCCCTACTCATGTCCTAAATATTGAAAACCCTAATCCTAATTTCACTTTGCAAGACCTCAAATCATGTTTGCTTGAAAAAACCCAGAAATCATTGGCTGCAATTAAGGATTCTGTCTATCTTACTTTTGATGGTCGACCCATTAAGGATTCAACTCTATTATATGGTTCTGGGATTAGCCCGTTTTCCACTTTGGTACTACGTTTCCGCCTTCGTGGTGGTGGTGGTGATGGAGGTGCCACGGGAGCGGAGTCCCGAGACTGTTATCTCAAGATGTATGCTGTTAAGAAACCGGATAAAATTGATCCAAATGAGATTAGGTTGTCTAGATGGTTGAATTGTGCGTTGTCGAACGAGTCATTAAAGCATCCTGTTGTTATTGATAAGCTTGGGAATTTGTTCAATAAGGAGACGTTAGTTGAGGCTTTATTGAAGAAAAGGCTGCCTAAGCAGTTTGGGTATATAAAGGGATTGAAAGATATGATTCCGGTTGAGCTATCGGTGATTCCGGGCAAAGAGGATAGAGGGCTTGGTGATGGTGAAGGGACTGGGTTTCAGTGCCCGGTAACAGGGTTGGAGTTCAATGGGAAGTACAAGTTCTTTGCTTTGAGGGGTTGTGGGCATGTTTTGAGTGCAAAAGCTTTGAAGGAGGTGAAATCCTCGGCTTGTTTGGTTTGCCACAAGGAGGTTGTGGAGAGTGACAAAATTGTGATCAACGGGAGTGAAGAAGAGGTTGCGGCTTTGAGGGAGAGAATGGAGGAAGAAAGGGTGAAATTGAAGGATAGTAAGAAGGTGAAGAAGGGGAGGAATGTGGATGTAGCTGTGAATGGTGAAGAGGTCATTGGGGCATCACGCTTGAGCGGAATGAAACATGGGATTGAGGATAAGCTGGTAGGCAAGGATGCAAGGAAAGTGGAAGGGAATGGTAAAATTGGCATTAAAAGTAAGATTGAAGTTAAGGATGTGAAGAATAGTTCGAGCAACGGGTCTGGGAAGAGGTTTAAGGCTGTTGATGTAGCTCCAGCTCATGCTACAAAGGAAGTCTATGCCTCCATTTTCACTTCATCAAGAAAGTCTGACTTCAAGGAGACTTATTCTTGCAGATCTTTGCCCCTTGGAAGAAACTGATAGCTGTTTTTGTCGAGGTGATCTGCTAGTGTCTTGGACTGGTTTTATTGTCTTAAAATGTTGTTTCACGATAGATAGTTACATGCTAGACCACTGAGTCGTAGATGTTGCCTCTTGCCATTTGATTCAGTCGGTACTTTATATGTATAACATACATTGTTATTGTACATTTGATGTTGCTTTTCAGAGTCTGCTTGAAACACTATAGCAGCTTTTGTTCACTCGCTTATGACCGTTTTCTGCTGATTTCTTTTAAATGATTTGTACTTCTAGT</gDNA_template>
            <first_frame> R  I  R  *  N  Y  N  L  F  P  L  S  R  T  R  A  L  R  F  L  F  N  S  G  I  L  F  *  I  S  L  R  F  Q  F  I  N  P  N  N  G  T  P  N  A  Q  F  P  S  F  Y  T  I  A  R  A  S  D  P  Y  S  C  P  K  Y  *  K  P  *  S  *  F  H  F  A  R  P  Q  I  M  F  A  *  K  N  P  E  I  I  G  C  N  *  G  F  C  L  S  Y  F  *  W  S  T  H  *  G  F  N  S  I  I  W  F  W  D  *  P  V  F  H  F  G  T  T  F  P  P  S  W  W  W  W  *  W  R  C  H  G  S  G  V  P  R  L  L  S  Q  D  V  C  C  *  E  T  G  *  N  *  S  K  *  D  *  V  V  *  M  V  E  L  C  V  V  E  R  V  I  K  A  S  C  C  Y  *  *  A  W  E  F  V  Q  *  G  D  V  S  *  G  F  I  E  E  K  A  A  *  A  V  W  V  Y  K  G  I  E  R  Y  D  S  G  *  A  I  G  D  S  G  Q  R  G  *  R  A  W  *  W  *  R  D  W  V  S  V  P  G  N  R  V  G  V  Q  W  E  V  Q  V  L  C  F  E  G  L  W  A  C  F  E  C  K  S  F  E  G  G  E  I  L  G  L  F  G  L  P  Q  G  G  C  G  E  *  Q  N  C  D  Q  R  E  *  R  R  G  C  G  F  E  G  E  N  G  G  R  K  G  E  I  E  G  *  *  E  G  E  E  G  E  E  C  G  C  S  C  E  W  *  R  G  H  W  G  I  T  L  E  R  N  E  T  W  D  *  G  *  A  G  R  Q  G  C  K  E  S  G  R  E  W  *  N  W  H  *  K  *  D  *  S  *  G  C  E  E  *  F  E  Q  R  V  W  E  E  V  *  G  C  *  C  S  S  S  S  C  Y  K  G  S  L  C  L  H  F  H  F  I  K  K  V  *  L  Q  G  D  L  F  L  Q  I  F  A  P  W  K  K  L  I  A  V  F  V  E  V  I  C  *  C  L  G  L  V  L  L  S  *  N  V  V  S  R  *  I  V  T  C  *  T  T  E  S  *  M  L  P  L  A  I  *  F  S  R  Y  F  I  C  I  T  Y  I  V  I  V  H  L  M  L  L  F  R  V  C  L  K  H  Y  S  S  F  C  S  L  A  Y  D  R  F  L  L  I  S  F  K  *  F  V  L  L   </first_frame>
            <second_frame>  E  Y  D  K  I  T  I  F  F  P  F  R  E  P  E  L  F  D  F  S  S  I  Q  V  F  F  F  K  F  L  F  D  F  N  S  *  T  L  I  M  E  P  Q  M  R  N  F  P  V  F  I  Q  S  P  E  L  Q  I  P  T  H  V  L  N  I  E  N  P  N  P  N  F  T  L  Q  D  L  K  S  C  L  L  E  K  T  Q  K  S  L  A  A  I  K  D  S  V  Y  L  T  F  D  G  R  P  I  K  D  S  T  L  L  Y  G  S  G  I  S  P  F  S  T  L  V  L  R  F  R  L  R  G  G  G  G  D  G  G  A  T  G  A  E  S  R  D  C  Y  L  K  M  Y  A  V  K  K  P  D  K  I  D  P  N  E  I  R  L  S  R  W  L  N  C  A  L  S  N  E  S  L  K  H  P  V  V  I  D  K  L  G  N  L  F  N  K  E  T  L  V  E  A  L  L  K  K  R  L  P  K  Q  F  G  Y  I  K  G  L  K  D  M  I  P  V  E  L  S  V  I  P  G  K  E  D  R  G  L  G  D  G  E  G  T  G  F  Q  C  P  V  T  G  L  E  F  N  G  K  Y  K  F  F  A  L  R  G  C  G  H  V  L  S  A  K  A  L  K  E  V  K  S  S  A  C  L  V  C  H  K  E  V  V  E  S  D  K  I  V  I  N  G  S  E  E  E  V  A  A  L  R  E  R  M  E  E  E  R  V  K  L  K  D  S  K  K  V  K  K  G  R  N  V  D  V  A  V  N  G  E  E  V  I  G  A  S  R  L  S  G  M  K  H  G  I  E  D  K  L  V  G  K  D  A  R  K  V  E  G  N  G  K  I  G  I  K  S  K  I  E  V  K  D  V  K  N  S  S  S  N  G  S  G  K  R  F  K  A  V  D  V  A  P  A  H  A  T  K  E  V  Y  A  S  I  F  T  S  S  R  K  S  D  F  K  E  T  Y  S  C  R  S  L  P  L  G  R  N  *  *  L  F  L  S  R  *  S  A  S  V  L  D  W  F  Y  C  L  K  M  L  F  H  D  R  *  L  H  A  R  P  L  S  R  R  C  C  L  L  P  F  D  S  V  G  T  L  Y  V  *  H  T  L  L  L  Y  I  *  C  C  F  S  E  S  A  *  N  T  I  A  A  F  V  H  S  L  M  T  V  F  C  *  F  L  L  N  D  L  Y  F  *  </second_frame>
            <third_frame>   N  T  I  K  L  Q  S  F  S  P  F  E  N  Q  S  S  S  I  S  L  Q  F  R  Y  S  F  L  N  F  S  S  I  S  I  H  K  P  *  *  W  N  P  K  C  A  I  S  Q  F  L  Y  N  R  Q  S  F  R  S  L  L  M  S  *  I  L  K  T  L  I  L  I  S  L  C  K  T  S  N  H  V  C  L  K  K  P  R  N  H  W  L  Q  L  R  I  L  S  I  L  L  L  M  V  D  P  L  R  I  Q  L  Y  Y  M  V  L  G  L  A  R  F  P  L  W  Y  Y  V  S  A  F  V  V  V  V  V  M  E  V  P  R  E  R  S  P  E  T  V  I  S  R  C  M  L  L  R  N  R  I  K  L  I  Q  M  R  L  G  C  L  D  G  *  I  V  R  C  R  T  S  H  *  S  I  L  L  L  L  I  S  L  G  I  C  S  I  R  R  R  *  L  R  L  Y  *  R  K  G  C  L  S  S  L  G  I  *  R  D  *  K  I  *  F  R  L  S  Y  R  *  F  R  A  K  R  I  E  G  L  V  M  V  K  G  L  G  F  S  A  R  *  Q  G  W  S  S  M  G  S  T  S  S  L  L  *  G  V  V  G  M  F  *  V  Q  K  L  *  R  R  *  N  P  R  L  V  W  F  A  T  R  R  L  W  R  V  T  K  L  *  S  T  G  V  K  K  R  L  R  L  *  G  R  E  W  R  K  K  G  *  N  *  R  I  V  R  R  *  R  R  G  G  M  W  M  *  L  *  M  V  K  R  S  L  G  H  H  A  *  A  E  *  N  M  G  L  R  I  S  W  *  A  R  M  Q  G  K  W  K  G  M  V  K  L  A  L  K  V  R  L  K  L  R  M  *  R  I  V  R  A  T  G  L  G  R  G  L  R  L  L  M  *  L  Q  L  M  L  Q  R  K  S  M  P  P  F  S  L  H  Q  E  S  L  T  S  R  R  L  I  L  A  D  L  C  P  L  E  E  T  D  S  C  F  C  R  G  D  L  L  V  S  W  T  G  F  I  V  L  K  C  C  F  T  I  D  S  Y  M  L  D  H  *  V  V  D  V  A  S  C  H  L  I  Q  S  V  L  Y  M  Y  N  I  H  C  Y  C  T  F  D  V  A  F  Q  S  L  L  E  T  L  *  Q  L  L  F  T  R  L  *  P  F  S  A  D  F  F  *  M  I  C  T  S  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="-"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="96544" stop="95354"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1188</number_coding_nucleotides>
                  <number_encoded_amino_acids>396</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TLIMEPQMRNFPVFIQSPELQIPTHVLNIENPNPNFTLQDLKSCLLEKTQKSLAAIKDSVYLTFDGRPIKDSTLLYGSGISPFSTLVLRFRLRGGGGDGGATGAESRDCYLKMYAVKKPDKIDPNEIRLSRWLNCALSNESLKHPVVIDKLGNLFNKETLVEALLKKRLPKQFGYIKGLKDMIPVELSVIPGKEDRGLGDGEGTGFQCPVTGLEFNGKYKFFALRGCGHVLSAKALKEVKSSACLVCHKEVVESDKIVINGSEEEVAALRERMEEERVKLKDSKKVKKGRNVDVAVNGEEVIGASRLSGMKHGIEDKLVGKDARKVEGNGKIGIKSKIEVKDVKNSSSNGSGKRFKAVDVAPAHATKEVYASIFTSSRKSDFKETYSCRSLPLGRN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="22" PGL_strand="-" PGL_start="109350" PGL_stop="108375"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="109350" e_stop="109188"/>
            <exon e_start="109012" e_stop="108375"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.980" acc_prob="0.975" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="109350" e_stop="109188" e_length="163"/>
          </exon>
          <intron i_serial="1" don_prob="0.980" acc_prob="0.975">
            <gDNA_intron_boundary i_start="109187" i_stop="109013" i_length="175"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="109012" e_stop="108375" e_length="638"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="109350" stop="109188"/>
              <exon start="109012" stop="108375"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U576361" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTCATTCCGGCGAATGGATATGCTCATCAATTTCACTGACCCCATGGTGGCAACGAAATTTGACGCGAAATCATGCACATGGGCATTTGGGATGAATTTGTTTGATCTGCAGGAGTGGAGGAAACGAAACTTGACTGGGCTCTATCACAAGTACTTGGAGCTG : GGAAGTGATAGACCATTAATGAAAGCTGGTACTTTGCCCATTGGTTGGATGACCTTCTACAAACATACACGTGCTATAGATCGGAGATGGCATGTCTTGGGATTGGGGTACGACTCTGGTGTCAAATTGAATGAAATTGAGCAAGCAGCTGTGATTCATTATGATGGAGTTATGAAACCATGGTTAGAGATTGGACTCCAGAAGTTCAAGCCGTACTGGAAGAAACACGTTAGGTATGAACATCCTTTTGTGCAACAATGCAATATTCATGACTAGGAATTTTATCCTTTAGCAGTAGGCTGAGTTCCATTTCACCACAATCACGTAGTGTAGGAACCCCTCACGTTCACCTTATTCTTTCACACATTGATCCCGCAATTTTTAACTTGTAAAGTCCAACTTTTACGCCCCTCCTGTCCACGTTTATTTCCTGCTCAGTGGTCATAGAAATTTATCCCACAATAGCAATAACTTGGGACCTGATATTGGCATGTCCCTGAGATTCCTGCAATGCTTGGACTTGCATGTATATTGATCTTGTAGAATGCTAAAAATGTTCTTATAATTTACCAGTTGTAGATGAGATAAGAAATATATTTCTCTGTGACATTCTTCTTGTAGAATGTATATTGTTGGAG</gDNA_template>
            <first_frame> V  I  P  A  N  G  Y  A  H  Q  F  H  *  P  H  G  G  N  E  I  *  R  E  I  M  H  M  G  I  W  D  E  F  V  *  S  A  G  V  E  E  T  K  L  D  W  A  L  S  Q  V  L  G  A   : G  K  *  *  T  I  N  E  S  W  Y  F  A  H  W  L  D  D  L  L  Q  T  Y  T  C  Y  R  S  E  M  A  C  L  G  I  G  V  R  L  W  C  Q  I  E  *  N  *  A  S  S  C  D  S  L  *  W  S  Y  E  T  M  V  R  D  W  T  P  E  V  Q  A  V  L  E  E  T  R  *  V  *  T  S  F  C  A  T  M  Q  Y  S  *  L  G  I  L  S  F  S  S  R  L  S  S  I  S  P  Q  S  R  S  V  G  T  P  H  V  H  L  I  L  S  H  I  D  P  A  I  F  N  L  *  S  P  T  F  T  P  L  L  S  T  F  I  S  C  S  V  V  I  E  I  Y  P  T  I  A  I  T  W  D  L  I  L  A  C  P  *  D  S  C  N  A  W  T  C  M  Y  I  D  L  V  E  C  *  K  C  S  Y  N  L  P  V  V  D  E  I  R  N  I  F  L  C  D  I  L  L  V  E  C  I  L  L  E </first_frame>
            <second_frame>  S  F  R  R  M  D  M  L  I  N  F  T  D  P  M  V  A  T  K  F  D  A  K  S  C  T  W  A  F  G  M  N  L  F  D  L  Q  E  W  R  K  R  N  L  T  G  L  Y  H  K  Y  L  E  L  :  G  S  D  R  P  L  M  K  A  G  T  L  P  I  G  W  M  T  F  Y  K  H  T  R  A  I  D  R  R  W  H  V  L  G  L  G  Y  D  S  G  V  K  L  N  E  I  E  Q  A  A  V  I  H  Y  D  G  V  M  K  P  W  L  E  I  G  L  Q  K  F  K  P  Y  W  K  K  H  V  R  Y  E  H  P  F  V  Q  Q  C  N  I  H  D  *  E  F  Y  P  L  A  V  G  *  V  P  F  H  H  N  H  V  V  *  E  P  L  T  F  T  L  F  F  H  T  L  I  P  Q  F  L  T  C  K  V  Q  L  L  R  P  S  C  P  R  L  F  P  A  Q  W  S  *  K  F  I  P  Q  *  Q  *  L  G  T  *  Y  W  H  V  P  E  I  P  A  M  L  G  L  A  C  I  L  I  L  *  N  A  K  N  V  L  I  I  Y  Q  L  *  M  R  *  E  I  Y  F  S  V  T  F  F  L  *  N  V  Y  C  W   </second_frame>
            <third_frame>   H  S  G  E  W  I  C  S  S  I  S  L  T  P  W  W  Q  R  N  L  T  R  N  H  A  H  G  H  L  G  *  I  C  L  I  C  R  S  G  G  N  E  T  *  L  G  S  I  T  S  T  W  S  W :   E  V  I  D  H  *  *  K  L  V  L  C  P  L  V  G  *  P  S  T  N  I  H  V  L  *  I  G  D  G  M  S  W  D  W  G  T  T  L  V  S  N  *  M  K  L  S  K  Q  L  *  F  I  M  M  E  L  *  N  H  G  *  R  L  D  S  R  S  S  S  R  T  G  R  N  T  L  G  M  N  I  L  L  C  N  N  A  I  F  M  T  R  N  F  I  L  *  Q  *  A  E  F  H  F  T  T  I  T  *  C  R  N  P  S  R  S  P  Y  S  F  T  H  *  S  R  N  F  *  L  V  K  S  N  F  Y  A  P  P  V  H  V  Y  F  L  L  S  G  H  R  N  L  S  H  N  S  N  N  L  G  P  D  I  G  M  S  L  R  F  L  Q  C  L  D  L  H  V  Y  *  S  C  R  M  L  K  M  F  L  *  F  T  S  C  R  *  D  K  K  Y  I  S  L  *  H  S  S  C  R  M  Y  I  V  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="-"/>
                <serials PGL_serial="22" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="109349" stop="109188"/>
                    <exon start="109012" stop="108737"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>435</number_coding_nucleotides>
                  <number_encoded_amino_acids>145</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFRRMDMLINFTDPMVATKFDAKSCTWAFGMNLFDLQEWRKRNLTGLYHKYLELGSDRPLMKAGTLPIGWMTFYKHTRAIDRRWHVLGLGYDSGVKLNEIEQAAVIHYDGVMKPWLEIGLQKFKPYWKKHVRYEHPFVQQCNIHD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="23" PGL_strand="-" PGL_start="115536" PGL_stop="109394"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="115536" e_stop="115043"/>
            <exon e_start="114930" e_stop="114896"/>
            <exon e_start="113510" e_stop="113469"/>
            <exon e_start="113377" e_stop="113239"/>
            <exon e_start="113117" e_stop="113041"/>
            <exon e_start="112143" e_stop="111917"/>
            <exon e_start="111078" e_stop="110721"/>
            <exon e_start="109703" e_stop="109394"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.406" acc_prob="0.998" e_score="0.980"/>
          <exon-intron don_prob="0.964" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.610" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.125" acc_prob="0.995" e_score="0.987"/>
          <exon-intron don_prob="1.000" acc_prob="0.870" e_score="0.982"/>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.980">
            <gDNA_exon_boundary e_start="115536" e_stop="115043" e_length="494"/>
          </exon>
          <intron i_serial="1" don_prob="0.406" acc_prob="0.998">
            <gDNA_intron_boundary i_start="115042" i_stop="114931" i_length="112"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="114930" e_stop="114896" e_length="35"/>
          </exon>
          <intron i_serial="2" don_prob="0.964" acc_prob="0.996">
            <gDNA_intron_boundary i_start="114895" i_stop="113511" i_length="1385"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="113510" e_stop="113469" e_length="42"/>
          </exon>
          <intron i_serial="3" don_prob="0.990" acc_prob="0.998">
            <gDNA_intron_boundary i_start="113468" i_stop="113378" i_length="91"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="113377" e_stop="113239" e_length="139"/>
          </exon>
          <intron i_serial="4" don_prob="0.610" acc_prob="0.967">
            <gDNA_intron_boundary i_start="113238" i_stop="113118" i_length="121"/>
          </intron>
          <exon e_serial="5" e_score="0.987">
            <gDNA_exon_boundary e_start="113117" e_stop="113041" e_length="77"/>
          </exon>
          <intron i_serial="5" don_prob="0.125" acc_prob="0.995">
            <gDNA_intron_boundary i_start="113040" i_stop="112144" i_length="897"/>
          </intron>
          <exon e_serial="6" e_score="0.982">
            <gDNA_exon_boundary e_start="112143" e_stop="111917" e_length="227"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.870">
            <gDNA_intron_boundary i_start="111916" i_stop="111079" i_length="838"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="111078" e_stop="110721" e_length="358"/>
          </exon>
          <intron i_serial="7" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="110720" i_stop="109704" i_length="1017"/>
          </intron>
          <exon e_serial="8" e_score="0.997">
            <gDNA_exon_boundary e_start="109703" e_stop="109394" e_length="310"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115536" stop="115043"/>
              <exon start="114930" stop="114896"/>
              <exon start="113510" stop="113469"/>
              <exon start="113377" stop="113239"/>
              <exon start="113117" stop="113041"/>
              <exon start="112143" stop="111917"/>
              <exon start="111078" stop="110721"/>
              <exon start="109703" stop="109394"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574664" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="23" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGACAATAATTGTATAATTGTACCTAACCTAAAGTTAATTCTCCAAAAAGTATATAACTCCATTTTTACTCTCTCTTTCTTCCTTTGTTTCTTCTTGAAATCTCATTTCCTTCACCTGCACTTCACGGGTACACACGAACATGGCACCCCCCAATCAATCTCCGATTTCATCGCCATTCTTTAATCAAAATTAAATTTTTTTAATTAAAAAAAAACCCAAATCGATTCCGTTTGACCTAGAAGACAAAAAACCAGAAAAAACCCTAGTACCATTTTTTTTTTTGGTATCAGGAACTGTGTATTTTGATATACCCTTTATTGAATCTGAATCGATCCAAAAACCCCAAGTGTTGTTTGAGTTAATTACATGTCTTAGATGAGGTTTACTAGAAGATTTACGAGGATTTTTATTATCCTCTGTTTGATTGCTGTTTTTGTTACAACTCCAATCTTGTTGTTTTCTTCACATAGGTTGATTCATCTTGGTTCTGATG : CATCGAAGGAGTTTGTTGGAGATTTATCCATTCTT : AAGCACAGGATAGAGGTTCAGGCGCTTAATGCAGTCCAACAG : GAAGAAGTTGAAACCCTCAAAGAACCAATCTTGGATGTCTACCGAGATGGAAACCAAATTTCTGCAGTCAGTTTGTATACCATTGATAAGAATGATAGTCTTGGTCAACCTAAGAATGTCAGTTTGGCTGGAAATAATG : AAACCACACATGATACGAAGAAAGTAGGTCAACAAAGTTTACCAGAGGAAACACTGGGCAGACGAGAAAAGGCATCG : GAAAAATCCAGACCAAAAGAGGTGCTTCAGAATGTACAGTCTCATCCACGGAGGGTATTGGATGAGAGGGTGAAGGAGATTAAAGATCAGCTGATAAGGGCCAAAGCATTCTTGAATTTTGCACCGGCAGGTAGTAACTCTAATTTTGTGAAAGAGATAAAGCTACGAATTAAAGACTTGGAACGAGCTGCTGGTGAAGTTTCAAAAGATTCTGATTTGTCTAGGAG : GGCCATACAGAAGATGAAGGCTATGAGTGCAACCCTGTCGAAAGCCAGTAGATTGTTCCCTGATTGCTCGGCAATGGTGAAAAAACTTCGTGCGATGACTTATAATGCTGAGGAACAACTTCGAGCGCAAAAGAATCAAGCTTCCTTCCTTGAAAATCTTGCCGGAAGAACTACTCCGAAAGGCCTTCATTGCCTCTCCATGCGGTTAACCACTGAGTACTTTGCCCTACAAACCGAGGAGCAGAAACTACCTAACCAACATAAATTTCAGAATCCAGATCTCCACCACTTCGCTGTTTTCTCTGACAATGTTTTGGCATGTTCTGCAGTTGTCAACTCAACTGTATCAACTGCTAGG : GCTCCAGAGAAGATTGTGTTTCATATAGTGACGGATTCTCTTAACCTACCAGCAATGACAATGTGGTTCTTGTCGAATCCTCCTGGCAAAGCAACAATTCAGATCCAGAGCATAGACATGTTTGATTGGTTACTGAACAAGGATACTCTGCAGAAGCAAGAGTCTCTTGATCCAAGATACACTTCTCCACTGAATCACCTGCGCTTCTACCTGCCTGAAATTTTTCCTTATCTCAACAAGATAGTGCTCCTTGATCATGACGTGGTTGTGAAAAGGGATCTAAGTGGACTTTGGCACATCAACATGAATG</gDNA_template>
            <first_frame> R  Q  *  L  Y  N  C  T  *  P  K  V  N  S  P  K  S  I  *  L  H  F  Y  S  L  F  L  P  L  F  L  L  E  I  S  F  P  S  P  A  L  H  G  Y  T  R  T  W  H  P  P  I  N  L  R  F  H  R  H  S  L  I  K  I  K  F  F  *  L  K  K  N  P  N  R  F  R  L  T  *  K  T  K  N  Q  K  K  P  *  Y  H  F  F  F  W  Y  Q  E  L  C  I  L  I  Y  P  L  L  N  L  N  R  S  K  N  P  K  C  C  L  S  *  L  H  V  L  D  E  V  Y  *  K  I  Y  E  D  F  Y  Y  P  L  F  D  C  C  F  C  Y  N  S  N  L  V  V  F  F  T  *  V  D  S  S  W  F  *  C :   I  E  G  V  C  W  R  F  I  H  S   : *  A  Q  D  R  G  S  G  A  *  C  S  P  T   : G  R  S  *  N  P  Q  R  T  N  L  G  C  L  P  R  W  K  P  N  F  C  S  Q  F  V  Y  H  *  *  E  *  *  S  W  S  T  *  E  C  Q  F  G  W  K  *  * :   N  H  T  *  Y  E  E  S  R  S  T  K  F  T  R  G  N  T  G  Q  T  R  K  G  I   : G  K  I  Q  T  K  R  G  A  S  E  C  T  V  S  S  T  E  G  I  G  *  E  G  E  G  D  *  R  S  A  D  K  G  Q  S  I  L  E  F  C  T  G  R  *  *  L  *  F  C  E  R  D  K  A  T  N  *  R  L  G  T  S  C  W  *  S  F  K  R  F  *  F  V  *  E  :  G  H  T  E  D  E  G  Y  E  C  N  P  V  E  S  Q  *  I  V  P  *  L  L  G  N  G  E  K  T  S  C  D  D  L  *  C  *  G  T  T  S  S  A  K  E  S  S  F  L  P  *  K  S  C  R  K  N  Y  S  E  R  P  S  L  P  L  H  A  V  N  H  *  V  L  C  P  T  N  R  G  A  E  T  T  *  P  T  *  I  S  E  S  R  S  P  P  L  R  C  F  L  *  Q  C  F  G  M  F  C  S  C  Q  L  N  C  I  N  C  *   : G  S  R  E  D  C  V  S  Y  S  D  G  F  S  *  P  T  S  N  D  N  V  V  L  V  E  S  S  W  Q  S  N  N  S  D  P  E  H  R  H  V  *  L  V  T  E  Q  G  Y  S  A  E  A  R  V  S  *  S  K  I  H  F  S  T  E  S  P  A  L  L  P  A  *  N  F  S  L  S  Q  Q  D  S  A  P  *  S  *  R  G  C  E  K  G  S  K  W  T  L  A  H  Q  H  E   </first_frame>
            <second_frame>  D  N  N  C  I  I  V  P  N  L  K  L  I  L  Q  K  V  Y  N  S  I  F  T  L  S  F  F  L  C  F  F  L  K  S  H  F  L  H  L  H  F  T  G  T  H  E  H  G  T  P  Q  S  I  S  D  F  I  A  I  L  *  S  K  L  N  F  F  N  *  K  K  T  Q  I  D  S  V  *  P  R  R  Q  K  T  R  K  N  P  S  T  I  F  F  F  G  I  R  N  C  V  F  *  Y  T  L  Y  *  I  *  I  D  P  K  T  P  S  V  V  *  V  N  Y  M  S  *  M  R  F  T  R  R  F  T  R  I  F  I  I  L  C  L  I  A  V  F  V  T  T  P  I  L  L  F  S  S  H  R  L  I  H  L  G  S  D   : A  S  K  E  F  V  G  D  L  S  I  L  :  K  H  R  I  E  V  Q  A  L  N  A  V  Q  Q  :  E  E  V  E  T  L  K  E  P  I  L  D  V  Y  R  D  G  N  Q  I  S  A  V  S  L  Y  T  I  D  K  N  D  S  L  G  Q  P  K  N  V  S  L  A  G  N  N   : E  T  T  H  D  T  K  K  V  G  Q  Q  S  L  P  E  E  T  L  G  R  R  E  K  A  S  :  E  K  S  R  P  K  E  V  L  Q  N  V  Q  S  H  P  R  R  V  L  D  E  R  V  K  E  I  K  D  Q  L  I  R  A  K  A  F  L  N  F  A  P  A  G  S  N  S  N  F  V  K  E  I  K  L  R  I  K  D  L  E  R  A  A  G  E  V  S  K  D  S  D  L  S  R  R :   A  I  Q  K  M  K  A  M  S  A  T  L  S  K  A  S  R  L  F  P  D  C  S  A  M  V  K  K  L  R  A  M  T  Y  N  A  E  E  Q  L  R  A  Q  K  N  Q  A  S  F  L  E  N  L  A  G  R  T  T  P  K  G  L  H  C  L  S  M  R  L  T  T  E  Y  F  A  L  Q  T  E  E  Q  K  L  P  N  Q  H  K  F  Q  N  P  D  L  H  H  F  A  V  F  S  D  N  V  L  A  C  S  A  V  V  N  S  T  V  S  T  A  R  :  A  P  E  K  I  V  F  H  I  V  T  D  S  L  N  L  P  A  M  T  M  W  F  L  S  N  P  P  G  K  A  T  I  Q  I  Q  S  I  D  M  F  D  W  L  L  N  K  D  T  L  Q  K  Q  E  S  L  D  P  R  Y  T  S  P  L  N  H  L  R  F  Y  L  P  E  I  F  P  Y  L  N  K  I  V  L  L  D  H  D  V  V  V  K  R  D  L  S  G  L  W  H  I  N  M  N  </second_frame>
            <third_frame>   T  I  I  V  *  L  Y  L  T  *  S  *  F  S  K  K  Y  I  T  P  F  L  L  S  L  S  S  F  V  S  S  *  N  L  I  S  F  T  C  T  S  R  V  H  T  N  M  A  P  P  N  Q  S  P  I  S  S  P  F  F  N  Q  N  *  I  F  L  I  K  K  K  P  K  S  I  P  F  D  L  E  D  K  K  P  E  K  T  L  V  P  F  F  F  L  V  S  G  T  V  Y  F  D  I  P  F  I  E  S  E  S  I  Q  K  P  Q  V  L  F  E  L  I  T  C  L  R  *  G  L  L  E  D  L  R  G  F  L  L  S  S  V  *  L  L  F  L  L  Q  L  Q  S  C  C  F  L  H  I  G  *  F  I  L  V  L  M  :  H  R  R  S  L  L  E  I  Y  P  F  L :   S  T  G  *  R  F  R  R  L  M  Q  S  N  R :   K  K  L  K  P  S  K  N  Q  S  W  M  S  T  E  M  E  T  K  F  L  Q  S  V  C  I  P  L  I  R  M  I  V  L  V  N  L  R  M  S  V  W  L  E  I  M  :  K  P  H  M  I  R  R  K  *  V  N  K  V  Y  Q  R  K  H  W  A  D  E  K  R  H  R :   K  N  P  D  Q  K  R  C  F  R  M  Y  S  L  I  H  G  G  Y  W  M  R  G  *  R  R  L  K  I  S  *  *  G  P  K  H  S  *  I  L  H  R  Q  V  V  T  L  I  L  *  K  R  *  S  Y  E  L  K  T  W  N  E  L  L  V  K  F  Q  K  I  L  I  C  L  G   : G  P  Y  R  R  *  R  L  *  V  Q  P  C  R  K  P  V  D  C  S  L  I  A  R  Q  W  *  K  N  F  V  R  *  L  I  M  L  R  N  N  F  E  R  K  R  I  K  L  P  S  L  K  I  L  P  E  E  L  L  R  K  A  F  I  A  S  P  C  G  *  P  L  S  T  L  P  Y  K  P  R  S  R  N  Y  L  T  N  I  N  F  R  I  Q  I  S  T  T  S  L  F  S  L  T  M  F  W  H  V  L  Q  L  S  T  Q  L  Y  Q  L  L  G :   L  Q  R  R  L  C  F  I  *  *  R  I  L  L  T  Y  Q  Q  *  Q  C  G  S  C  R  I  L  L  A  K  Q  Q  F  R  S  R  A  *  T  C  L  I  G  Y  *  T  R  I  L  C  R  S  K  S  L  L  I  Q  D  T  L  L  H  *  I  T  C  A  S  T  C  L  K  F  F  L  I  S  T  R  *  C  S  L  I  M  T  W  L  *  K  G  I  *  V  D  F  G  T  S  T  *  M </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="-"/>
                <serials PGL_serial="23" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="115160" stop="115043"/>
                    <exon start="114930" stop="114896"/>
                    <exon start="113510" stop="113469"/>
                    <exon start="113377" stop="113239"/>
                    <exon start="113117" stop="113041"/>
                    <exon start="112143" stop="111917"/>
                    <exon start="111078" stop="110721"/>
                    <exon start="109703" stop="109395"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1305</number_coding_nucleotides>
                  <number_encoded_amino_acids>435</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MRFTRRFTRIFIILCLIAVFVTTPILLFSSHRLIHLGSDASKEFVGDLSILKHRIEVQALNAVQQEEVETLKEPILDVYRDGNQISAVSLYTIDKNDSLGQPKNVSLAGNNETTHDTKKVGQQSLPEETLGRREKASEKSRPKEVLQNVQSHPRRVLDERVKEIKDQLIRAKAFLNFAPAGSNSNFVKEIKLRIKDLERAAGEVSKDSDLSRRAIQKMKAMSATLSKASRLFPDCSAMVKKLRAMTYNAEEQLRAQKNQASFLENLAGRTTPKGLHCLSMRLTTEYFALQTEEQKLPNQHKFQNPDLHHFAVFSDNVLACSAVVNSTVSTARAPEKIVFHIVTDSLNLPAMTMWFLSNPPGKATIQIQSIDMFDWLLNKDTLQKQESLDPRYTSPLNHLRFYLPEIFPYLNKIVLLDHDVVVKRDLSGLWHINMN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="24" PGL_strand="-" PGL_start="118439" PGL_stop="117232"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="118439" e_stop="118213"/>
            <exon e_start="117704" e_stop="117232"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.977" e_score="0.987"/>
          <exon-only e_score="0.975"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.987">
            <gDNA_exon_boundary e_start="118439" e_stop="118213" e_length="227"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.977">
            <gDNA_intron_boundary i_start="118212" i_stop="117705" i_length="508"/>
          </intron>
          <exon e_serial="2" e_score="0.975">
            <gDNA_exon_boundary e_start="117704" e_stop="117232" e_length="473"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="118439" stop="118213"/>
              <exon start="117704" stop="117232"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U585707" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAACTTAATTAATATATATTTGACTAATAGTCACCAGAAAAAGAAGAAGAAAAACATGTTGGGGAAATTTATAGAGCAAGTACAAATAAATGCAGCAGCAAGTGAAGTGTGGAATCTCTATGGCACTAATGAATTTCCAAAATTTGTTGTTGAAAAACTCCCACACATTGTTGAAAAAGTTGAGTTAATTGAAGGCAATGGAGGAGCTGGTACACTAGTGCAAGTTA : GTTTAGTTGGGAATCCTCCATATAAAGAGAAGTTTGTGTTAATGGATGATGAAAAAAGAGTGAAGGGAGTAGAGATTGTTGAAGGTGGATATCTTGATCTTGGATTTACTTTTTATGGATTCAAATTTGAAGTCATTGAAAAGGATGAAAATTCATCTTTCATCAAACTTACAATTGATTTTGAGACTAAAGATGTTGAAAATGTTCATCTTACTATTGCCAATCTCCAAGCTTTTATTGCCATCATGAAAACTTCTGCTGATTATCTTGAGAAATAATCTTATTATTATTATCATTATTTGGATTTTTTTTCATAGCTTATGTTGTAATTTTCCATTTTACAATTTCTTATTGTTGTTATTTCCCTTTCTTGTAATGTATTGTATTATGATGGACTTACTATTTGGATGTTATTAAGTATCTGTTCATCAAGCTTCAACGTATGAGAAAGAATCACTTAATACTTTTTTTTT</gDNA_template>
            <first_frame> Q  L  N  *  Y  I  F  D  *  *  S  P  E  K  E  E  E  K  H  V  G  E  I  Y  R  A  S  T  N  K  C  S  S  K  *  S  V  E  S  L  W  H  *  *  I  S  K  I  C  C  *  K  T  P  T  H  C  *  K  S  *  V  N  *  R  Q  W  R  S  W  Y  T  S  A  S  * :   F  S  W  E  S  S  I  *  R  E  V  C  V  N  G  *  *  K  K  S  E  G  S  R  D  C  *  R  W  I  S  *  S  W  I  Y  F  L  W  I  Q  I  *  S  H  *  K  G  *  K  F  I  F  H  Q  T  Y  N  *  F  *  D  *  R  C  *  K  C  S  S  Y  Y  C  Q  S  P  S  F  Y  C  H  H  E  N  F  C  *  L  S  *  E  I  I  L  L  L  L  S  L  F  G  F  F  F  I  A  Y  V  V  I  F  H  F  T  I  S  Y  C  C  Y  F  P  F  L  *  C  I  V  L  *  W  T  Y  Y  L  D  V  I  K  Y  L  F  I  K  L  Q  R  M  R  K  N  H  L  I  L  F  F  </first_frame>
            <second_frame>  N  L  I  N  I  Y  L  T  N  S  H  Q  K  K  K  K  K  N  M  L  G  K  F  I  E  Q  V  Q  I  N  A  A  A  S  E  V  W  N  L  Y  G  T  N  E  F  P  K  F  V  V  E  K  L  P  H  I  V  E  K  V  E  L  I  E  G  N  G  G  A  G  T  L  V  Q  V   : S  L  V  G  N  P  P  Y  K  E  K  F  V  L  M  D  D  E  K  R  V  K  G  V  E  I  V  E  G  G  Y  L  D  L  G  F  T  F  Y  G  F  K  F  E  V  I  E  K  D  E  N  S  S  F  I  K  L  T  I  D  F  E  T  K  D  V  E  N  V  H  L  T  I  A  N  L  Q  A  F  I  A  I  M  K  T  S  A  D  Y  L  E  K  *  S  Y  Y  Y  Y  H  Y  L  D  F  F  S  *  L  M  L  *  F  S  I  L  Q  F  L  I  V  V  I  S  L  S  C  N  V  L  Y  Y  D  G  L  T  I  W  M  L  L  S  I  C  S  S  S  F  N  V  *  E  R  I  T  *  Y  F  F  F </second_frame>
            <third_frame>   T  *  L  I  Y  I  *  L  I  V  T  R  K  R  R  R  K  T  C  W  G  N  L  *  S  K  Y  K  *  M  Q  Q  Q  V  K  C  G  I  S  M  A  L  M  N  F  Q  N  L  L  L  K  N  S  H  T  L  L  K  K  L  S  *  L  K  A  M  E  E  L  V  H  *  C  K  L  :  V  *  L  G  I  L  H  I  K  R  S  L  C  *  W  M  M  K  K  E  *  R  E  *  R  L  L  K  V  D  I  L  I  L  D  L  L  F  M  D  S  N  L  K  S  L  K  R  M  K  I  H  L  S  S  N  L  Q  L  I  L  R  L  K  M  L  K  M  F  I  L  L  L  P  I  S  K  L  L  L  P  S  *  K  L  L  L  I  I  L  R  N  N  L  I  I  I  I  I  I  W  I  F  F  H  S  L  C  C  N  F  P  F  Y  N  F  L  L  L  L  F  P  F  L  V  M  Y  C  I  M  M  D  L  L  F  G  C  Y  *  V  S  V  H  Q  A  S  T  Y  E  K  E  S  L  N  T  F  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="-"/>
                <serials PGL_serial="24" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="118438" stop="118213"/>
                    <exon start="117704" stop="117427"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>501</number_coding_nucleotides>
                  <number_encoded_amino_acids>167</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NLINIYLTNSHQKKKKKNMLGKFIEQVQINAAASEVWNLYGTNEFPKFVVEKLPHIVEKVELIEGNGGAGTLVQVSLVGNPPYKEKFVLMDDEKRVKGVEIVEGGYLDLGFTFYGFKFEVIEKDENSSFIKLTIDFETKDVENVHLTIANLQAFIAIMKTSADYLEK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="25" PGL_strand="+" PGL_start="119837" PGL_stop="121390"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="119837" e_stop="120238"/>
            <exon e_start="120946" e_stop="121390"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.995" e_score="0.940"/>
          <exon-only e_score="0.966"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.940">
            <gDNA_exon_boundary e_start="119837" e_stop="120238" e_length="402"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.995">
            <gDNA_intron_boundary i_start="120239" i_stop="120945" i_length="707"/>
          </intron>
          <exon e_serial="2" e_score="0.966">
            <gDNA_exon_boundary e_start="120946" e_stop="121390" e_length="445"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="119837" stop="120238"/>
              <exon start="120946" stop="121390"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U565695" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="25" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TATATTTTATGATATAATATATAGTATCCAGCAGCCAAGATGGAAGTCTTTTAAGTCCAAATTCAAACTTGGCAATTGTAACCTTATACACATTTTTGTAAATTTTACATGGTGTACTACTATAAATTCCACTAGAAAAACTAAAACATAATAACATTTTTTTCACGAATCATTGCTTACTAAAAATTCTGCGTCCATCACATCCGCGCTCTATCGATATGAAGGGGACAATTTCAGATGAGATAGAAGTGAATGTGCCTGCAAATGTAGCATGGGAGCTCTATGGAACATTACATTTGTCTAGGTTCATTGTGCAAGAGTTGCCTACTCTTCTCAACAAAGTTGATGTGATTGAAGGTGATGGTAGTACTGGAACTGTCCTCAAAATCACTTTTCCTCAAG : GTACATCAGGAATACCTTATTTCAAGGAAAGATTCAACATAGTAGACAATGAAAAAAGATACAAGCAATCTCAAGTGATTGAAGGTGGATATGTTGATCTTGGATATATTTTTTATGGAATTAGATTTGAAGTGAATGAGAAAGATGAAAATTCATGCATCACAAAATTTACAGTAAATTATGAAGTTGAAGATGTGAAACTTGCAAATCATGCATTCACTATGTTTGAGCCATTGCAGACTGTCATCAGATCAGCCAAGACTTATTTAACAAATAAACACACATCTAATTAATTAAGATGACCAAGTTTTTATTGTTATTCCAATGAAATTCAATTGTACTCTATTCAAATTTCACTCGCAAGATTATACTGAGTATGTTGTTGTAGTATATCATATTGCATAACGTTTCACACATAAATATGTGACACAAAAATAATAATATC</gDNA_template>
            <first_frame> Y  I  L  *  Y  N  I  *  Y  P  A  A  K  M  E  V  F  *  V  Q  I  Q  T  W  Q  L  *  P  Y  T  H  F  C  K  F  Y  M  V  Y  Y  Y  K  F  H  *  K  N  *  N  I  I  T  F  F  S  R  I  I  A  Y  *  K  F  C  V  H  H  I  R  A  L  S  I  *  R  G  Q  F  Q  M  R  *  K  *  M  C  L  Q  M  *  H  G  S  S  M  E  H  Y  I  C  L  G  S  L  C  K  S  C  L  L  F  S  T  K  L  M  *  L  K  V  M  V  V  L  E  L  S  S  K  S  L  F  L  K  :  V  H  Q  E  Y  L  I  S  R  K  D  S  T  *  *  T  M  K  K  D  T  S  N  L  K  *  L  K  V  D  M  L  I  L  D  I  F  F  M  E  L  D  L  K  *  M  R  K  M  K  I  H  A  S  Q  N  L  Q  *  I  M  K  L  K  M  *  N  L  Q  I  M  H  S  L  C  L  S  H  C  R  L  S  S  D  Q  P  R  L  I  *  Q  I  N  T  H  L  I  N  *  D  D  Q  V  F  I  V  I  P  M  K  F  N  C  T  L  F  K  F  H  S  Q  D  Y  T  E  Y  V  V  V  V  Y  H  I  A  *  R  F  T  H  K  Y  V  T  Q  K  *  *  Y  </first_frame>
            <second_frame>  I  F  Y  D  I  I  Y  S  I  Q  Q  P  R  W  K  S  F  K  S  K  F  K  L  G  N  C  N  L  I  H  I  F  V  N  F  T  W  C  T  T  I  N  S  T  R  K  T  K  T  *  *  H  F  F  H  E  S  L  L  T  K  N  S  A  S  I  T  S  A  L  Y  R  Y  E  G  D  N  F  R  *  D  R  S  E  C  A  C  K  C  S  M  G  A  L  W  N  I  T  F  V  *  V  H  C  A  R  V  A  Y  S  S  Q  Q  S  *  C  D  *  R  *  W  *  Y  W  N  C  P  Q  N  H  F  S  S  R :   Y  I  R  N  T  L  F  Q  G  K  I  Q  H  S  R  Q  *  K  K  I  Q  A  I  S  S  D  *  R  W  I  C  *  S  W  I  Y  F  L  W  N  *  I  *  S  E  *  E  R  *  K  F  M  H  H  K  I  Y  S  K  L  *  S  *  R  C  E  T  C  K  S  C  I  H  Y  V  *  A  I  A  D  C  H  Q  I  S  Q  D  L  F  N  K  *  T  H  I  *  L  I  K  M  T  K  F  L  L  L  F  Q  *  N  S  I  V  L  Y  S  N  F  T  R  K  I  I  L  S  M  L  L  *  Y  I  I  L  H  N  V  S  H  I  N  M  *  H  K  N  N  N  I </second_frame>
            <third_frame>   Y  F  M  I  *  Y  I  V  S  S  S  Q  D  G  S  L  L  S  P  N  S  N  L  A  I  V  T  L  Y  T  F  L  *  I  L  H  G  V  L  L  *  I  P  L  E  K  L  K  H  N  N  I  F  F  T  N  H  C  L  L  K  I  L  R  P  S  H  P  R  S  I  D  M  K  G  T  I  S  D  E  I  E  V  N  V  P  A  N  V  A  W  E  L  Y  G  T  L  H  L  S  R  F  I  V  Q  E  L  P  T  L  L  N  K  V  D  V  I  E  G  D  G  S  T  G  T  V  L  K  I  T  F  P  Q   : G  T  S  G  I  P  Y  F  K  E  R  F  N  I  V  D  N  E  K  R  Y  K  Q  S  Q  V  I  E  G  G  Y  V  D  L  G  Y  I  F  Y  G  I  R  F  E  V  N  E  K  D  E  N  S  C  I  T  K  F  T  V  N  Y  E  V  E  D  V  K  L  A  N  H  A  F  T  M  F  E  P  L  Q  T  V  I  R  S  A  K  T  Y  L  T  N  K  H  T  S  N  *  L  R  *  P  S  F  Y  C  Y  S  N  E  I  Q  L  Y  S  I  Q  I  S  L  A  R  L  Y  *  V  C  C  C  S  I  S  Y  C  I  T  F  H  T  *  I  C  D  T  K  I  I  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="+"/>
                <serials PGL_serial="25" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="119962" stop="120238"/>
                    <exon start="120946" stop="121238"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>567</number_coding_nucleotides>
                  <number_encoded_amino_acids>189</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IPLEKLKHNNIFFTNHCLLKILRPSHPRSIDMKGTISDEIEVNVPANVAWELYGTLHLSRFIVQELPTLLNKVDVIEGDGSTGTVLKITFPQGTSGIPYFKERFNIVDNEKRYKQSQVIEGGYVDLGYIFYGIRFEVNEKDENSCITKFTVNYEVEDVKLANHAFTMFEPLQTVIRSAKTYLTNKHTSN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="26" PGL_strand="+" PGL_start="125307" PGL_stop="126202"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="125307" e_stop="125538"/>
            <exon e_start="126166" e_stop="126202"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.984" e_score="0.927"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.927">
            <gDNA_exon_boundary e_start="125307" e_stop="125538" e_length="232"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.984">
            <gDNA_intron_boundary i_start="125539" i_stop="126165" i_length="627"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="126166" e_stop="126202" e_length="37"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125307" stop="125538"/>
              <exon start="126166" stop="126202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U591185" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="26" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAAAATAATAAAAATCCACCATTTTCTCTTCTTATCCTTTTTTTTTTTTAATTATTGTGAAAAAAAATCTAAAATTTGGTGTAAAAATGGCTGGAAATGGAGTATTTGCAGAAATAATTGATGGAGAAGTGTACAAATATTATTGTGAAGGAGAATGGAAAAAATCAGCTTCTGGAAAATCTGTTGCTATTATTAATCCTACTACAAGAAAGACACAATACAAAGTTCAAG : CATGTACACAAGAAGAGGTGAACAAAGTAATGGAAAT</gDNA_template>
            <first_frame> K  K  *  *  K  S  T  I  F  S  S  Y  P  F  F  F  L  I  I  V  K  K  N  L  K  F  G  V  K  M  A  G  N  G  V  F  A  E  I  I  D  G  E  V  Y  K  Y  Y  C  E  G  E  W  K  K  S  A  S  G  K  S  V  A  I  I  N  P  T  T  R  K  T  Q  Y  K  V  Q   : A  C  T  Q  E  E  V  N  K  V  M  E   </first_frame>
            <second_frame>  K  N  N  K  N  P  P  F  S  L  L  I  L  F  F  F  *  L  L  *  K  K  I  *  N  L  V  *  K  W  L  E  M  E  Y  L  Q  K  *  L  M  E  K  C  T  N  I  I  V  K  E  N  G  K  N  Q  L  L  E  N  L  L  L  L  L  I  L  L  Q  E  R  H  N  T  K  F  K  :  H  V  H  K  K  R  *  T  K  *  W  K  </second_frame>
            <third_frame>   K  I  I  K  I  H  H  F  L  F  L  S  F  F  F  F  N  Y  C  E  K  K  S  K  I  W  C  K  N  G  W  K  W  S  I  C  R  N  N  *  W  R  S  V  Q  I  L  L  *  R  R  M  E  K  I  S  F  W  K  I  C  C  Y  Y  *  S  Y  Y  K  K  D  T  I  Q  S  S  S :   M  Y  T  R  R  G  E  Q  S  N  G  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="+"/>
                <serials PGL_serial="26" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125319" stop="125538"/>
                    <exon start="126166" stop="126200"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KSTIFSSYPFFFLIIVKKNLKFGVKMAGNGVFAEIIDGEVYKYYCEGEWKKSASGKSVAIINPTTRKTQYKVQACTQEEVNKVME</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="27" PGL_strand="+" PGL_start="128866" PGL_stop="130188"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="128866" e_stop="129533"/>
            <exon e_start="129843" e_stop="129959"/>
            <exon e_start="130057" e_stop="130188"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.935" e_score="0.985"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.955"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.985">
            <gDNA_exon_boundary e_start="128866" e_stop="129533" e_length="668"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.935">
            <gDNA_intron_boundary i_start="129534" i_stop="129842" i_length="309"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="129843" e_stop="129959" e_length="117"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="129960" i_stop="130056" i_length="97"/>
          </intron>
          <exon e_serial="3" e_score="0.955">
            <gDNA_exon_boundary e_start="130057" e_stop="130188" e_length="132"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="128866" stop="129533"/>
              <exon start="129843" stop="129959"/>
              <exon start="130057" stop="130188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590075" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="27" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATCAAAACAGAACATGCTAGTGCTTTTTCCTTAACAATCAAGTTGTCGGAACTGCATTGTATAAGGAAATCAAAACGAATGTATGCATTTTATGAAATCGACATATTAGTAGGCTTTTCTAATGATATAATGACTTCATGGATTGCCTGATTTACTATCACTAAACTTGATCACATTTCTGTTCGTGTGTTTGATGAACTTCTCTTTGATTCATTAATCATCAAAGATATGAATGCAATGTAGAGTTCATATTGCACGTATAATATGTCGATATCCTTGTTTATCACAGTGGTCAAAGATGCACAGCTGTTAAGGTCGTGTTGGTGATGGAATCTGTTGCTGACATTCTTGTTGAGAAGGTAAATGCCAAAGTGGCAAAGTTAACCGTTGGGCCACCTGAAGATAATTGTGATATCACTCCAGTTGTCTCCGAGTCATCCGCAAATTTCATCGAGGGGTTGGTCATGGACGCAAAGGAGAAAGATGCAACATTTTGCCAGCCATACAAGAGAGAAGGCAACCTTATCTGGCCCTTGTTGTTAGACAATGTTAGGCCGGACATGAGAATCGCTTGGGAAGAACCCTTTGGTCCAGTTTTGCCCGTTATTCGGATAAACTCAGTCGAAGAAGGAATTCACCACTGCAATGCTAGCAATTTCGGTCTGCAG : GGTTGTGTGTTCACCAAAGACATCAACAAAGCAATACTGATCAGTGATGCAATGGAAACCGGAACCGTTCAGATTAACTCAGCTCCTGCTCGTGGACCGGATCATTTTCCGTTCCAG : GGTATTAAGGACAGCGGAATTGGATCACAAGGGATCACTAACAGTATTAACATGATGACTAAAGTGAAGACCACTGTGATCAATTTGCCAACCCCTTCTTATACTATGGGGTAAATTAATCACTGTTTTTTG</gDNA_template>
            <first_frame> I  K  T  E  H  A  S  A  F  S  L  T  I  K  L  S  E  L  H  C  I  R  K  S  K  R  M  Y  A  F  Y  E  I  D  I  L  V  G  F  S  N  D  I  M  T  S  W  I  A  *  F  T  I  T  K  L  D  H  I  S  V  R  V  F  D  E  L  L  F  D  S  L  I  I  K  D  M  N  A  M  *  S  S  Y  C  T  Y  N  M  S  I  S  L  F  I  T  V  V  K  D  A  Q  L  L  R  S  C  W  *  W  N  L  L  L  T  F  L  L  R  R  *  M  P  K  W  Q  S  *  P  L  G  H  L  K  I  I  V  I  S  L  Q  L  S  P  S  H  P  Q  I  S  S  R  G  W  S  W  T  Q  R  R  K  M  Q  H  F  A  S  H  T  R  E  K  A  T  L  S  G  P  C  C  *  T  M  L  G  R  T  *  E  S  L  G  K  N  P  L  V  Q  F  C  P  L  F  G  *  T  Q  S  K  K  E  F  T  T  A  M  L  A  I  S  V  C  R :   V  V  C  S  P  K  T  S  T  K  Q  Y  *  S  V  M  Q  W  K  P  E  P  F  R  L  T  Q  L  L  L  V  D  R  I  I  F  R  S  R :   V  L  R  T  A  E  L  D  H  K  G  S  L  T  V  L  T  *  *  L  K  *  R  P  L  *  S  I  C  Q  P  L  L  I  L  W  G  K  L  I  T  V  F   </first_frame>
            <second_frame>  S  K  Q  N  M  L  V  L  F  P  *  Q  S  S  C  R  N  C  I  V  *  G  N  Q  N  E  C  M  H  F  M  K  S  T  Y  *  *  A  F  L  M  I  *  *  L  H  G  L  P  D  L  L  S  L  N  L  I  T  F  L  F  V  C  L  M  N  F  S  L  I  H  *  S  S  K  I  *  M  Q  C  R  V  H  I  A  R  I  I  C  R  Y  P  C  L  S  Q  W  S  K  M  H  S  C  *  G  R  V  G  D  G  I  C  C  *  H  S  C  *  E  G  K  C  Q  S  G  K  V  N  R  W  A  T  *  R  *  L  *  Y  H  S  S  C  L  R  V  I  R  K  F  H  R  G  V  G  H  G  R  K  G  E  R  C  N  I  L  P  A  I  Q  E  R  R  Q  P  Y  L  A  L  V  V  R  Q  C  *  A  G  H  E  N  R  L  G  R  T  L  W  S  S  F  A  R  Y  S  D  K  L  S  R  R  R  N  S  P  L  Q  C  *  Q  F  R  S  A   : G  L  C  V  H  Q  R  H  Q  Q  S  N  T  D  Q  *  C  N  G  N  R  N  R  S  D  *  L  S  S  C  S  W  T  G  S  F  S  V  P   : G  Y  *  G  Q  R  N  W  I  T  R  D  H  *  Q  Y  *  H  D  D  *  S  E  D  H  C  D  Q  F  A  N  P  F  L  Y  Y  G  V  N  *  S  L  F  F  </second_frame>
            <third_frame>   Q  N  R  T  C  *  C  F  F  L  N  N  Q  V  V  G  T  A  L  Y  K  E  I  K  T  N  V  C  I  L  *  N  R  H  I  S  R  L  F  *  *  Y  N  D  F  M  D  C  L  I  Y  Y  H  *  T  *  S  H  F  C  S  C  V  *  *  T  S  L  *  F  I  N  H  Q  R  Y  E  C  N  V  E  F  I  L  H  V  *  Y  V  D  I  L  V  Y  H  S  G  Q  R  C  T  A  V  K  V  V  L  V  M  E  S  V  A  D  I  L  V  E  K  V  N  A  K  V  A  K  L  T  V  G  P  P  E  D  N  C  D  I  T  P  V  V  S  E  S  S  A  N  F  I  E  G  L  V  M  D  A  K  E  K  D  A  T  F  C  Q  P  Y  K  R  E  G  N  L  I  W  P  L  L  L  D  N  V  R  P  D  M  R  I  A  W  E  E  P  F  G  P  V  L  P  V  I  R  I  N  S  V  E  E  G  I  H  H  C  N  A  S  N  F  G  L  Q  :  G  C  V  F  T  K  D  I  N  K  A  I  L  I  S  D  A  M  E  T  G  T  V  Q  I  N  S  A  P  A  R  G  P  D  H  F  P  F  Q  :  G  I  K  D  S  G  I  G  S  Q  G  I  T  N  S  I  N  M  M  T  K  V  K  T  T  V  I  N  L  P  T  P  S  Y  T  M  G  *  I  N  H  C  F  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002D20.2" strand="+"/>
                <serials PGL_serial="27" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="129129" stop="129533"/>
                    <exon start="129843" stop="129959"/>
                    <exon start="130057" stop="130170"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>633</number_coding_nucleotides>
                  <number_encoded_amino_acids>211</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YVDILVYHSGQRCTAVKVVLVMESVADILVEKVNAKVAKLTVGPPEDNCDITPVVSESSANFIEGLVMDAKEKDATFCQPYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTKDINKAILISDAMETGTVQINSAPARGPDHFPFQGIKDSGIGSQGITNSINMMTKVKTTVINLPTPSYTMG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 50 chains have been computed
$ 
$ memory statistics:
$ 73672 bytes spliced alignments in total
$ 35 spliced alignments have been stored
$ 2104 bytes was the average size of a spliced alignment
$ 37984 bytes predicted gene locations in total
$ 27 predicted gene locations have been stored
$ 1406 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 55 backtrace matrices have been allocated
$ 
$ date finished: 2009-07-24 20:53:00
-->
