<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-15 15:30:46"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E582660" ref_strand="+" ref_description="SGN-E582660 [8293]">
      <seq>aaccaattgaggataccaaacaagcgctttgtacggccttgtcaaagcttgattctcaagatctgtttaatataatagctttcaacagcgaaaaatatctattttcatcatcactcgagttggcaaccaagaagtctattgaaaacgcaactcagtggattggaacaaattttattgctggtggtggcacaaatattttgaatccattgactcaggccatggagatgttttcgtatacccagcaacacattccgattattttcctggtcactgatggagctgttgaagacgaaagacacatctgtaatgttctgaagagtcatctgatgcaaaaacaaatgatatgcccacggctttacacatttggcataggattgttctgcaaccattactttctccgcatgcttgcagtgatgagtcgtggccactataatgctgcttatgatgttgattccattgaagttcgcatggaacaactgttctccagggcatcatctgtcattcttgcgaatattgcctttgagaaccttgatggtcttgaagaattgaggtctttcccactccagttcagacctttcatcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="+" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="1" stop="2013"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1" g_stop="171" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="45" r_stop="215" r_length="171" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="172" i_stop="753" i_length="582">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.946" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="754" g_stop="910" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="372" r_length="157" r_score="0.955"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="911" i_stop="1294" i_length="384">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.977" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="1295" g_stop="1372" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="373" r_stop="450" r_length="78" r_score="0.987"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="1373" i_stop="1610" i_length="238">
            <donor d_prob="0.885" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="1611" g_stop="1711" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="451" r_stop="550" r_length="100" r_score="0.941"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="1712" i_stop="1969" i_length="258">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.935" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="1970" g_stop="2002" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="551" r_stop="582" r_length="32" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="+" ref_id="SGN-E582660" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>540</cumulative_length_of_scored_exons>
        <coverage percentage="0.928" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E582660" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1" e_stop="171"/>
          <exon e_start="754" e_stop="910"/>
          <exon e_start="1295" e_stop="1372"/>
          <exon e_start="1611" e_stop="1711"/>
          <exon e_start="1970" e_stop="2002"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCTTGATTCTCAAGATCTGTTCAATATAATAGCTTTCAACAACGAAAAATATCTATTTTCATCATCACTCGAGTTGGCAACCAAGAAGGCTATTGAAAACGCAACTCAGTGGATTGGAACGAATTTTATTGCTGGTGGTGGCACAAATATTTTGAATCCATTGACTCAGGTCACATACCCCTTTTTTTAGATAACTGTCTCAGTTATATTATTTTTTTTCATCTATTTAGTTAGTTGCAAACTTTATTTTTTGTATGTTAATCGTCTCATCTATTGATTCGGGAGTAGATGATCTATATCTCAGATAGTATCAAGCTTCTATTTTTTGTGAAAAACATGAAGAATGAAAAGAAAATATATCAGTGGTCACATTTTGGTCCACCATTTTTAGATGTTCACGGTCAATCATCCTCTCTCAGTGTGTGAGATGCTACTTAGTGACACTGGTTTCATCCCAAAAATATCTTTAGGACACTTGAGGGTCTACTTGTTAGTTGAATATCATTTGTTGAGCATTTGGAAAGGAGTTACTAATATCCTTTTTTCTTTTCCACAAGTAGATAAATGAAAAAAAAAACATGTGGTCAATCTCTTAAAAGAAGTGTTAACAACAACGTACATTCATCCTCGCCGCTTACTATTTTATTCCTAGAATGTTGAGTTCATGATATTGAAGTCCTACTGAATCCATAGATTTTTATCCTACCTGTATTTTCTGTCAAATCTAACACAAAACTTTTACCTTTATCAGGCCATGGAGATGTTTTCCTATACCCAGCAACACATTCCAATGATTTTCCTGGTCACTGATGGAGCTGTTGAAGATGAAAGACACATCTGTGATGTTCTGAAGAGTCATCTGATGCAAAAACAAATGATATGCCCGCGGCTTTACGCATTTGGCATAGGTATGCATCTGGAAGAAGCATCGCCCCTCCAAAGCTCCCCCTCTCATTCCCACCCGTAAGGAAAGTATTTTGGTAGAGGAGATGCATTAATCTCCGATTTTAACCTGACTAATATTTGCTCAAAAATCTTGCTAATCTACGTAATGATGTTTTTCATTTCATCACATTCTGTATGCGTCCAAGTTCGATAAGAACTTGTTTTAGTAGGTTGTGTGAATTTTTTGAGAATGTATCCCATTAGACACCGAAATTATGATGGTCTTATATTTTGGGAGATCACATCATCTTATTTTTTACCTAGATTCTAGGGATCTGAATCGAATCATTTGTCTTTTGCCGTAGATTTGTGCTTTTAATAACCTATTCTACCATGACTAATTTCAGGATTGTTCTGCAACCATTACTTTCTCCGCATGCTTGCAATGATGAGTCGTGGCCACTATAATGCTGCTTATGATGTTGGTAAGTTTAGTGATTCTGCAACTCATACAACAAGGTTGAAAGATGGCATTATAGTTATTATTTTTCGTTTCAAGGATTGAAATACTAATTTGATTTGCTTCAAGATAAATTACTTTTTGATCTGGACATACTCAACTTGATATAATGTTACATATAATTTCCTGTATTTTCTCGTGACTAACTGTAAGCAGTTGTTGATTGTAGTTGCCTTCTCATTATGTTTGGTGGTCTTGTACAGATTCTATTGAAGTTCGCGTTGAACAGCTGTTCTCCAGGGCATCATCTGTCATTCTTGCGGATATTGCCTTTGAGAACCTTGATGGTCTTGAAGAATTTGAGGTAGGCATGTGAGGATATTTGTTCTTTTATTCTTAGCTCTTTGATGGATCACAATTATGATAGTGCTGCTAACATTTAAATAATAACAAATCTAATCAGTCCTACCTCATTTTTGAAGAATTGGCTATTCCCTACACATAATATGGATACGACTTTAGTATGATCTGCATGCTTTATTATTATATGTTGTCGAAGTTTCGTGTTGTTTCCTACATGAATTCATGCTTCCTAAGGAAACTACCCTTAAATTTTCAATAGGTCTTTCCAACTCCAGTTCCAGACCTTTCATCC</genome_strand>
        <mrna_strand>AAGCTTGATTCTCAAGATCTGTTTAATATAATAGCTTTCAACAGCGAAAAATATCTATTTTCATCATCACTCGAGTTGGCAACCAAGAAGTCTATTGAAAACGCAACTCAGTGGATTGGAACAAATTTTATTGCTGGTGGTGGCACAAATATTTTGAATCCATTGACTCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATGGAGATGTTTTCGTATACCCAGCAACACATTCCGATTATTTTCCTGGTCACTGATGGAGCTGTTGAAGACGAAAGACACATCTGTAATGTTCTGAAGAGTCATCTGATGCAAAAACAAATGATATGCCCACGGCTTTACACATTTGGCATAG................................................................................................................................................................................................................................................................................................................................................................................................GATTGTTCTGCAACCATTACTTTCTCCGCATGCTTGCAGTGATGAGTCGTGGCCACTATAATGCTGCTTATGATGTTG..............................................................................................................................................................................................................................................ATTCCATTGAAGTTCGCATGGAACAACTGTTCTCCAGGGCATCATCTGTCATTCTTGCGAATATTGCCTTTGAGAACCTTGATGGTCTTGAAGAA-TTGAG..................................................................................................................................................................................................................................................................GTCTTTCCCACTCCAGTT-CAGACCTTTCATCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E692907" ref_strand="+" ref_description="SGN-E692907 [LH_Ea09P01]">
      <seq>cgttccttaaattttcaataggtctttcccactccagttccccatctttcatccaaaggttcattagtgttgtcaggcagataccgaggagtattccctgacacgcttaaagctaaaggagtccttgcagacttgagtaacttctccctggatctgaaagctatacagacaaaggacatacctcttgataaggtgttagcaaggcaacagattgaactacttactgctcaggcctggttgactgaaaataaggaccttgaacagaagatagcacaaacaagtatacagaatggcgtcatttctgagtatacacgcatgatattgatagagactgataaaggcaaagtaatcactgaatcaaccaccaacaccaagcgaaaggtttccactgctcctacgaagattgaagagcctaaattacagaagaagacattgctacagaatctcggggctggttttggtaactacagtgctacaaatgaaaatatttctcctggaaccaccgagacaaaacctgaaacagcagagattctagcgaaggcagcgtctaattgttgtggaaagacatgtgagatatgctgttgtatgtgctgcatacggacatgttcgaaaatgaacgatcaatgtgcaatcgtgctgacacagttcctgggttccttggcatgcttaggttgcttcgcttgctgtgaattatgctgttccgtaaatgatggatgagaaagttattgcattactttccctgcaatcttgttgtatacagttttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="+" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="1653" stop="6071"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1949" g_stop="2140" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="192" r_length="192" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2141" i_stop="4853" i_length="2713">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4854" g_stop="4928" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="193" r_stop="267" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="4929" i_stop="5031" i_length="103">
            <donor d_prob="0.743" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5032" g_stop="5145" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="381" r_length="114" r_score="0.982"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="5146" i_stop="5386" i_length="241">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="5387" g_stop="5767" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="382" r_stop="763" r_length="382" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="+" ref_id="SGN-E692907" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>762</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E692907" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1949" e_stop="2140"/>
          <exon e_start="4854" e_stop="4928"/>
          <exon e_start="5032" e_stop="5145"/>
          <exon e_start="5387" e_stop="5767"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACCCTTAAATTTTCAATAGGTCTTTCCAACTCCAGTTCCAGACCTTTCATCCAAAGGTCCATTAGTGTTGTCAGGCAGATACCGAGGAGTATTCCCTGACACGCTTAAAGCTAAAGGAGTCCTTGCAGACTTGAGTAACTTCTCCCTGGATCTGAAAGCTATACAGACAAAGGACATACCTCTTGATAAGGTAACATAACTGTCTTAGGCTGTACTTTTATTAAGATTGTGACTTGTGAATCAGACTATTTTTTTTTAACATCTAAATGCGTAATTTATTTAGTTGTAGTAAATTGCAATTCAAATTTTTAGAAAAGAGTTAAATATTATATCAAGAAAATGTTAACTTGAACGATAAAATTATTATTTAAGTGATAAATTAGGATATTTAGAGATATAAATGAATATATGTTAGATATAATTATTGAACAATCTAAATTATTCAAAATAGATTTATAGATAAAAAAGTTGTTGTGATGAACATTGCAATTTAACATACATTAATATATTAATCGAACTTATCCAACAAACTAAAATATAATTGTTATATAGGTCTGATTTAGACTCTATAACGTATTTGAACAAGTAACTAACAATCATCTAATTTTGACATTCCATCATGGAAAAAGATTCAATTAACCAACTATACCTTTCTCAGAAATAAAAATAAAATTCTGTTAATGAAAAATATTGTATTCACAAGCATTTGAGCTTCTTTGCATTAGTTTGAGTGCAAGTTGGTCCCGCATATCGCTCATTATCTGAGAATCATCTTCTATTGTCCAGCTAGTTCCATTTGTTTCCTCCAATGTTTTTTCTTGTTGTCCTTTTCATCAAATATTACTAGAGGTGTATCAACTTGATGAAACAAGTTATCATTGATGTGTTCTTTCCTAATAAAATAATTAACTATAAGAAATGCTATAACAACACCCTTTTGAATATTAATAGGATATGGAACAATCTTGTCGAATAGAGGAAATCTTGCTTTCAGTATTCCATAAGAACGTTCAATAACATTTCTAAGTTGTGCATGAGCATGAATAAACTTTTCCTCCTTAGTTATAGCACGCCTATTACACTAGTTTCTTAACCAATATCTAATGTTACGATACAGTGCTTGAAATCCTCGAGTATTTAGAATATGCTGAGCGATCACATAGATAGTATTTATCTGACATTAAAATATGAAAATCAGGTTTTGTGATAAATATTTTTTTCTTCTAAAGATGATATATTATGAATAAAAAACTGTAATTATCCTTATTCCCTTCTTCCAAATCCCATTTTTAAAAAAAAATAAAATTTACTTCAATAGTAAATGTCCATAGTCCAATATATATAATCAACAATAAACCGAACAAACATTTGAAAACAACAGAGTTCATATCCTATTTAGAGCTTGTTTAGATGGGCTTATAGCTTATGACTTGTCGTAAGTTATGATTTCTAAATTATGAATTGCCTTAATTTTTATTAGTTTGACTTAAAAACAAGTGCACTACAAAATTTCTTAAAAAATATTTTAGCTTAATAGCTACTAAACTAAGCCAATCAAATCCAGGCTCTTAGAATAGATACTCATAGATCCGCCAATTGTTTCGTCCTTTGCAACTGTTTTTGGCAAACCTAAATAGAAATAGGTTATATGAATATTGTATATAGTTCTTTCTTTGAATAAAATACAGTTAACTCTAACTTGAGACTATTAGTAGATCATAAACTAGACCAATTTTTTACGATGATAATTGAATACCAACCATAAGATTTTACTGTTTGCTAAGTGTCGTTCATTTTATCAAAGAGGGAGGGGCTCAAGTCAAACCTAGAATCTGTGGTTTCATGTATACTGTGTTTCTAGCTAATAGTAATAATGTGTGCATGACAAATATATGTAAAGTTTCTTTCATGTGATAATCAAACTAAAAAGGATTTATGGTCAATTATTGGTTGCTTGACCACTTATGATCATCTTCGGTTGGAAGGTAAACCAGTTCAATGTTTTTTCAATTTCCACGTTCATTACTTATTGGGAACTTAAATGTGTTACACATACCAATTAGGACAACATCTTCATTCATGAAACAAATAGTAACCTAACACAAATCAATAAACAATGTACTTCTAAAAAGTTTTTAAATCTTACCTATTCAAAAGGATTATTGAGTAGCCGATTGATAAATGGAGAAAGAAAGGAAAAGGAGGCGGTGATACTTGAGAAAGAGAGGAAGAGTAGGCACTGATTTTATGAAACAAACACTTCCAAGATTTTATTGTAAATTCATTAGTGTGTTTGAAGAGTCTCAATGGTGTTAAGATTCTTTCGCGGACCTGAACAAAGAGTTACTTTCAGACCTATTAGGAGATCTTTTTTCTAAAAACAACAAATGCACCTAATGGGCTAAAGTTCAAACCATTCAGATTCAAACCTTTATGAAGTGCAAACAAATGAGCCTAAATCTAAAGTGAATCATATTTCCTCCCGAGAAGAGCGAGTACAATGAAAGAATCATCTAAATGTAACTTTAGTAGCTGTACTGGCCTTTATATACCTGGTGGGCGTTCATGGACTTTTGTCCGTTTGGTGTAGTCTGTGGAAGACTTGGGGAAGGTAATCATGGTCTTAGTGTTAGTATTCAACTCTAAGATTTTAGAGCTTCAGCAACTACAACCATGTCTTGTGTTGAGTTCTTTGCTTGACTATATATATACATCAATACTTTCTTGCCTTTAGAAGTTTTAACAGTTCAACTGTATATTTCCTTAATTTGGCTGCTGGGAATTTTTTTCTGACTTCTCTGCTGCCTACTGAATTAATTACTCTTATCCGTCTTTAGTAAAAGTGAAAGTTCTAGATTTAAGAGGATAAATTGATTCAATTGCTTTCTATGTTCAATGTGCAGGTGTTAGCAAGGCAACAGATTGAACTACTTACTGCTCAGGCCTGGTTGACTGAAAATAAGGACCTTGAACAGAAGGTTGCTACCACCTCCTATATTACATTGGAACGCCTGGATTTTGTCCATGTATTCTTGACTTGATTGTTATTTTAGAGTTTTTTTACCATCTTTCTACTTGCAGATAGCACAAACAAGTATACAGAAAGGCGTTATTTCTGAGTATACACGCATGATATTGATAGAGACTGATAAAGGCAAAGTAATCACTGAATCAACCACCAACACCAAGCGAAAGGTATGGAGCTTTCTGATTAAAAAGAGAATTTAGCTTTTATACTACATCTAGCAGTTCTGAGTAGCCAATTGTAAACTATTATCTAATTTTATCTGGTACATCTGAAATTTCTCTTTACTGGTATCGACTTGAGTCATGCCATATGCAGTAAAACAATGAAATTACCGACCGCAATAGGCATAAATAGTCTAGCGATTGTCACCCATTGTAGTTTTTCTTTAACCAAAGCATAATGAAGCAGGTTTCCACTGCTCCTACGAAGATTGAAGAGCCTAAAATACAGAAGGAGACATTGCTACAGAATCTGGGGGCTGGTTTTGGTAACTACAGTGCTACAAATGAAAATATTTCTCCTGGAACCACCGAGACAAAACCTGAGACAGCCGAGTTTCTAGCGAAGGCAGCATCTAATTGTTGTGGAAAGACATGTGAAATATGCTGTTGTATGTGCTGTATACGGACATGTTCGAAAATGAATGATCAATGTGCAATCGTGCTGACACAGTTCCTGGGTTCCTTGGCATGCTTAGGTTGCTTCGCTTGCTGTGAATTATGCTGTTCCGTTAATGATGGATGAGAAAGTTATTGCA-TAGCTTCCTTGCAATCTTGTTGTATACAGTTT</genome_strand>
        <mrna_strand>CGTTCCTTAAATTTTCAATAGGTCTTTCCCACTCCAGTTCCCCATCTTTCATCCAAAGGTTCATTAGTGTTGTCAGGCAGATACCGAGGAGTATTCCCTGACACGCTTAAAGCTAAAGGAGTCCTTGCAGACTTGAGTAACTTCTCCCTGGATCTGAAAGCTATACAGACAAAGGACATACCTCTTGATAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTAGCAAGGCAACAGATTGAACTACTTACTGCTCAGGCCTGGTTGACTGAAAATAAGGACCTTGAACAGAAG.......................................................................................................ATAGCACAAACAAGTATACAGAATGGCGTCATTTCTGAGTATACACGCATGATATTGATAGAGACTGATAAAGGCAAAGTAATCACTGAATCAACCACCAACACCAAGCGAAAG.................................................................................................................................................................................................................................................GTTTCCACTGCTCCTACGAAGATTGAAGAGCCTAAATTACAGAAGAAGACATTGCTACAGAATCTCGGGGCTGGTTTTGGTAACTACAGTGCTACAAATGAAAATATTTCTCCTGGAACCACCGAGACAAAACCTGAAACAGCAGAGATTCTAGCGAAGGCAGCGTCTAATTGTTGTGGAAAGACATGTGAGATATGCTGTTGTATGTGCTGCATACGGACATGTTCGAAAATGAACGATCAATGTGCAATCGTGCTGACACAGTTCCTGGGTTCCTTGGCATGCTTAGGTTGCTTCGCTTGCTGTGAATTATGCTGTTCCGTAAATGATGGATGAGAAAGTTATTGCATTACTTTCCCTGCAATCTTGTTGTATACAGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E696747" ref_strand="+" ref_description="SGN-E696747 [LH_Ea09P01](-)">
      <seq>tgataaggtgttagcaaggcaacagattgaactacttactgctcaggcctggttgactgaaaataaggaccttgaacagaagatagcacaaacaagtatacagaatggcgtcatttctgagtatacacgcatgatattgatagagactgataaaggcaaagtaatcactgaatcaaccaccaacaccaagcgaaaggtttccactgctcctacgaagattgaagagcctaaattacagaagaagacattgctacagaatctcggggctggttttggtaactacagtgctacaaatgaaaatatttttcctggaaccaccgagacaaaacctgaaacagcagagattttagcgaaggcagcgtctaattgttgtggaaagacatgtgagatatgctgttgtatgtgctgcatacggacatgttcgaaaatgaacgatcaatgtgcaatcgtgctgacacagttcctgggttccttggcatgcttaggttgcttcgcttgctgtgaattatgctgttccgtaaatgatggatgagaaagttattgcatagcttccctgcaatcttgttgtatacagtttcatacatagtacaatttgtgtatcatggttttttgtgaatagtatgtatttatatacatacaagttttaccaattgctttactgtaatgatgtagaaatataacattttcatgtttgataatcagagaagaatgatgtctaaaagggagcatgattatttgccggaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="+" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="4552" stop="6244"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4854" g_stop="4928" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="8" r_stop="82" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4929" i_stop="5031" i_length="103">
            <donor d_prob="0.743" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5032" g_stop="5145" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="83" r_stop="196" r_length="114" r_score="0.982"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="5146" i_stop="5386" i_length="241">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5387" g_stop="5943" g_length="557"/>
          <reference_exon_boundary r_type="cDNA" r_start="197" r_stop="746" r_length="550" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="747" polyA_stop="768"/>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="+" ref_id="SGN-E696747" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>746</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E696747" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4854" e_stop="4928"/>
          <exon e_start="5032" e_stop="5145"/>
          <exon e_start="5387" e_stop="5943"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGTTAGCAAGGCAACAGATTGAACTACTTACTGCTCAGGCCTGGTTGACTGAAAATAAGGACCTTGAACAGAAGGTTGCTACCACCTCCTATATTACATTGGAACGCCTGGATTTTGTCCATGTATTCTTGACTTGATTGTTATTTTAGAGTTTTTTTACCATCTTTCTACTTGCAGATAGCACAAACAAGTATACAGAAAGGCGTTATTTCTGAGTATACACGCATGATATTGATAGAGACTGATAAAGGCAAAGTAATCACTGAATCAACCACCAACACCAAGCGAAAGGTATGGAGCTTTCTGATTAAAAAGAGAATTTAGCTTTTATACTACATCTAGCAGTTCTGAGTAGCCAATTGTAAACTATTATCTAATTTTATCTGGTACATCTGAAATTTCTCTTTACTGGTATCGACTTGAGTCATGCCATATGCAGTAAAACAATGAAATTACCGACCGCAATAGGCATAAATAGTCTAGCGATTGTCACCCATTGTAGTTTTTCTTTAACCAAAGCATAATGAAGCAGGTTTCCACTGCTCCTACGAAGATTGAAGAGCCTAAAATACAGAAGGAGACATTGCTACAGAATCTGGGGGCTGGTTTTGGTAACTACAGTGCTACAAATGAAAATATTTCTCCTGGAACCACCGAGACAAAACCTGAGACAGCCGAGTTTCTAGCGAAGGCAGCATCTAATTGTTGTGGAAAGACATGTGAAATATGCTGTTGTATGTGCTGTATACGGACATGTTCGAAAATGAATGATCAATGTGCAATCGTGCTGACACAGTTCCTGGGTTCCTTGGCATGCTTAGGTTGCTTCGCTTGCTGTGAATTATGCTGTTCCGTTAATGATGGATGAGAAAGTTATTGCATAGCTTCCTTGCAATCTTGTTGTATACAGTTTCTTACATAGTACAAGGTTTACATTTTGTGTATCATGGTTTCTTGTGAATAGTATGTATTTATATACATACAAGTTTTACCAATTGCTTTACTGTAATGATGTAGAAATATAACATTTGCATGTTTCATAATCAGAGAAGAATAATGT-TAAACTAGA-CATGATTATTTGCCGGACAA</genome_strand>
        <mrna_strand>GTGTTAGCAAGGCAACAGATTGAACTACTTACTGCTCAGGCCTGGTTGACTGAAAATAAGGACCTTGAACAGAAG.......................................................................................................ATAGCACAAACAAGTATACAGAATGGCGTCATTTCTGAGTATACACGCATGATATTGATAGAGACTGATAAAGGCAAAGTAATCACTGAATCAACCACCAACACCAAGCGAAAG.................................................................................................................................................................................................................................................GTTTCCACTGCTCCTACGAAGATTGAAGAGCCTAAATTACAGAAGAAGACATTGCTACAGAATCTCGGGGCTGGTTTTGGTAACTACAGTGCTACAAATGAAAATATTTTTCCTGGAACCACCGAGACAAAACCTGAAACAGCAGAGATTTTAGCGAAGGCAGCGTCTAATTGTTGTGGAAAGACATGTGAGATATGCTGTTGTATGTGCTGCATACGGACATGTTCGAAAATGAACGATCAATGTGCAATCGTGCTGACACAGTTCCTGGGTTCCTTGGCATGCTTAGGTTGCTTCGCTTGCTGTGAATTATGCTGTTCCGTAAATGATGGATGAGAAAGTTATTGCATAGCTTCCCTGCAATCTTGTTGTATACAGTTTCATACATAGTAC-------A-A-TTTGTGTATCATGGTTTTTTGTGAATAGTATGTATTTATATACATACAAGTTTTACCAATTGCTTTACTGTAATGATGTAGAAATATAACATTTTCATGTTTGATAATCAGAGAAGAATGATGTCTAAAAGGGAGCATGATTATTTGCCGGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E245978" ref_strand="+" ref_description="SGN-E245978 [cLEF-51-O12]">
      <seq>gtttggttgctaaaggctacaatcaggagtatgggcttgattactccgagacattcagtcctgttattcggcaggaaaccattcgcctggtactgtcactcgccgtgcgcaacaattggctcatcaatcagttggatgtttccaatgcttttcttcatggcatgcttgatgaaacaatctacatgacgcaaccaccgggctatgttgatcctcgcttccctcaacatgtttgcaaactccagaagtctctgtatgggctcaagcaagccccccgtgcttggtacgcacgtctgaaaacgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="30324" stop="29424"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30024" g_stop="29724" g_length="301"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="301" r_length="301" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E245978" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>301</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E245978" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30024" e_stop="29724"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTGGTTGCTAAAGGCTACAATCAGGAGTATGGGCTTGATTACTCCGAGACATTGAGTCCTGTTATTTGGCAAGAAACCATTCGCCTAATACTGTCACTCGCCGTGCGCAACAATTGGCTCATCAATCAGTTGGATGTTTCCAATGCTTTTCTTCATGGCATGCTTGATGAAACTATCTACATGACGCAACCACCGGGCTGTGTTGATCCCCGCTTCCCTCAACATGTTTGCAAACTTCAGAAGTCTCTGTATGGTCTCAAGCAAGCCCCCCGTGATTGGTACACACGTCTGAAAATGTT</genome_strand>
        <mrna_strand>GTTTGGTTGCTAAAGGCTACAATCAGGAGTATGGGCTTGATTACTCCGAGACATTCAGTCCTGTTATTCGGCAGGAAACCATTCGCCTGGTACTGTCACTCGCCGTGCGCAACAATTGGCTCATCAATCAGTTGGATGTTTCCAATGCTTTTCTTCATGGCATGCTTGATGAAACAATCTACATGACGCAACCACCGGGCTATGTTGATCCTCGCTTCCCTCAACATGTTTGCAAACTCCAGAAGTCTCTGTATGGGCTCAAGCAAGCCCCCCGTGCTTGGTACGCACGTCTGAAAACGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E367110" ref_strand="+" ref_description="SGN-E367110 [cLPT-5-O20]">
      <seq>tcatccacaatacacacgcaaccaccacccacacgcacaagcaacccgaaccaccccatacccacaacatctccaacccgatccgttttgggtccttaccggccacccccgaatcaccaccgcccgtgccaccccccaatactcatcccatgttaacccgtggcaaagccggtatctttaaacccaaaacctttcaggctaccatactaccaaatacaccccttcccgatagtgaaccaacaacctactctgttgcctcaaaaaatgcttattggcgtcatgctatggatgacgagtttaaggctttgactgatcaggaaacttgggttcttgtacctaagccccatgggcggcacccagtgggctgtaaatgggtgtacaaaattaaacacaatgcggatggcagtatttccaggtacaaggctcgtttggttgctaaaggctacaatcaggagtatggtcttgattactccgagacattcagtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="30750" stop="29665"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30450" g_stop="29965" g_length="486"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="486" r_length="486" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E367110" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>486</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E367110" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30450" e_stop="29965"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACCCACAATACACCCGCAACCACTACCCACATTCACAACCAACCCGAACCACCCCATACCCACAACATCTCCAGACCGATCCGTTTTGGGTCCTTCCCGGCCACCCCCGAATCACCACCGCCCGTGCCACCCCCCCAATACTCAT-CCATGTTAACCCGTGACAAAGCCGGTATCTTTAAACCCAAAACCTTTCAGGCTACCATACTACCAAATACACCCCTTCCCGATAGTGAACCAACAACCTACTCTGTTGCCTCAAAAAATGCTTATTGACGTCATGCTATAGATGACGAGTTTAAGGCTTTGACTGATCAGAAAACTGGGGTTCTTGTACCTAAGCCCCATAGGCGGCACCCAGTGGGTTGTATATGGGTATACAAAATTAAACACAATGCAGATGGTAGTATTTCCAGGTACAAGGCTCGTTTGGTTGCTAAAGGCTACAATCAGGAGTATGGGCTTGATTACTCCGAGACATTGAGTC</genome_strand>
        <mrna_strand>TCATCCACAATACACACGCAACCACCACCCACACGCACAAGCAACCCGAACCACCCCATACCCACAACATCTCCAACCCGATCCGTTTTGGGTCCTTACCGGCCACCCCCGAATCACCACCGCCCGTGCCA-CCCCCCAATACTCATCCCATGTTAACCCGTGGCAAAGCCGGTATCTTTAAACCCAAAACCTTTCAGGCTACCATACTACCAAATACACCCCTTCCCGATAGTGAACCAACAACCTACTCTGTTGCCTCAAAAAATGCTTATTGGCGTCATGCTATGGATGACGAGTTTAAGGCTTTGACTGATCAGGAAACTTGGGTTCTTGTACCTAAGCCCCATGGGCGGCACCCAGTGGGCTGTAAATGGGTGTACAAAATTAAACACAATGCGGATGGCAGTATTTCCAGGTACAAGGCTCGTTTGGTTGCTAAAGGCTACAATCAGGAGTATGGTCTTGATTACTCCGAGACATTCAGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E338242" ref_strand="+" ref_description="SGN-E338242 [cTOE-13-M11]">
      <seq>taatattttctttcttttagaattttagtaagttcttttataacacgttatcagcacgagtctctagctaattgagagtgagttttagttttttctttaactcatgttttggttgatctcgatatgagaatcaaggtattatttgcataagatcaggtatgtattttctaaaatattttatgatttagaataaaatagtattcagtcactagcaattatcaggaaccgaagacatatactactattggttgaatatgacatgctatataaaacttattaaatggaagaaggtataaaattttaatagcatgagtttgaatgttattttgattgttttgaaagactcaaagggtgagtcgtgttgtacttcggtctattataccgttggtcaagggtaagacgattgattcaagtttcatcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="+" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="41378" stop="42361"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41678" g_stop="42061" g_length="384"/>
          <reference_exon_boundary r_type="cDNA" r_start="36" r_stop="421" r_length="386" r_score="0.909"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="+" ref_id="SGN-E338242" ref_strand="+">
        <total_alignment_score>0.909</total_alignment_score>
        <cumulative_length_of_scored_exons>384</cumulative_length_of_scored_exons>
        <coverage percentage="0.912" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E338242" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41678" e_stop="42061"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTATAACACGTTATCAGCACGAGTCTCTATCTAATTGAGAGTGAGTTCTTGT-TTTTCTTTAGCTCATATTTTGGTTGATCTCGTTATGAAGATCAAAGTATTATATGCATAAAATCAGGTATGTATTTTCTAAAATATTTTATGATTTAGAATAAAATAGTGTTCACTCACTAAAAATTATCAGGAACCGAAGACATATACTACTATTGGTTGAATAAGACATGCTATACAAAACTTCTTAAAT-GAAGAAGGTATAAAATTTTAATAGCATGAGTTTGAATATTATTTTGATTGTTTTGAAAGACTCGAAGAATAAATCATGTTGTACTTCGATTTATTATACCGTTGGCTAAGGGTAAGACTATGGATTCAAGTTTCATCG</genome_strand>
        <mrna_strand>TTTTATAACACGTTATCAGCACGAGTCTCTAGCTAATTGAGAGTGAGTTTTAGTTTTTTCTTTAACTCATGTTTTGGTTGATCTCGATATGAGAATCAAGGTATTATTTGCATAAGATCAGGTATGTATTTTCTAAAATATTTTATGATTTAGAATAAAATAGTATTCAGTCACTAGCAATTATCAGGAACCGAAGACATATACTACTATTGGTTGAATATGACATGCTATATAAAACTTATTAAATGGAAGAAGGTATAAAATTTTAATAGCATGAGTTTGAATGTTATTTTGATTGTTTTGAAAGACTCAAAGGGTGAGTCGTGTTGTACTTCGGTCTATTATACCGTTGGTCAAGGGTAAGACGATTGATTCAAGTTTCATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E354965" ref_strand="+" ref_description="SGN-E354965 [cTOS-19-M24]">
      <seq>gataagacgatagattcaagttctatctcaccaaaagggtaagacatcaattagagttttgatacaccgtgattgggttcaagttccatagaattatggcgtaacacgccttacatgggtaagacattgagtttgatccaatgcataaaatgatgactaagaaaaataatatatttttgatgaaatgtctttaaattcatcatattgaatttgctccatttcttgaaaagaatatggtagcaacatgtgataactctgaaatccacctgttgacttgctccattcaatcatatgaatgtggtagcagtgaatgattagtttgaaagatgacaaataattaatgatatagaataagggagtggagggaaagaattataatagtcatcattgtggtaatgataaaaggaagaacactatgagttcttcaaatagtccttcaaaatgtgaaggcaacttttattatcaaaatggtatgaaaggttattagacttgtcaatgttgtcaaccccataatttgacaagtttataaatcctctatcatgacacaagaagataaagtgatggtacacttcatctttcaaagtgatgttgaggtgtgtcatggaaatatgatgaattttaaagccatgacaatgtgcttataatgcaaatttatgaagtacatataaataattagttcattccttgaagagaatgtgacttgtgatgagtatcgtgaatgctcgaccattctataaaagaatgggtccaaatgtgataaaatcatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="+" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="41822" stop="43201"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42122" g_stop="42901" g_length="780"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="767" r_length="767" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="+" ref_id="SGN-E354965" ref_strand="+">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>780</cumulative_length_of_scored_exons>
        <coverage percentage="1.017" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E354965" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42122" e_stop="42901"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATAAGACGATAGATTCAAGTTCTATCACACCAAAAAGGGTAAGACATCAATTAGAATTTTGATGCATCGTGATTGGGTTCAAGTCCCATAGAATTATGGCGTAACACACCTTATATGGGTAAGACATTGAGTTTGAACCAATGCACCATAGCGATGATAAAATGATGACTAAGAAAAATAATATATTTTTGATGAAATGTCTTGAAATTCATCATATTGAATTTGCTCCATTCCTTTAAAAGAATGTGGTAGCAACATGTGATAACTCTAAAATTCACCTATTGACTTGCTCCATTCAATCATATGAATGTGGGTAGCAGTGAATGATTAGTCTGAAAGATGATAAATAATTAATGATAT-GAATAAGGGCGTGGAGGGACAGAATTATAATAGTCATCATTGTGGTAATAATAAAAGGAAGAACACTATGAGTTCTTCAAATAGTCCTTCAAAATGTGAAGACAATTTTTATTATCAAAATGGTACGAAAGGCCATTAGACTTGTGAATGTTGTCAACCCAATAATTTGATAAGTTTATAAATCCTCTATCATGATACAAGAAGATAAAGTGATGGTACACTTAATCTTTCAAATTGATGTTGAGGTGTGTCATGGAAATATGATTAATTTTAAAGCCATGACAATGTGCTTATAATACAAATTTATGAAGTACATATAAATAATTAGTCCATTCCTTGAAGAGAATGTGACTTGTGATGAGTATCGTGAATGTTCGATCATTCTATAAGAGAATGGGTCCAGATGTGATAAAATCATT</genome_strand>
        <mrna_strand>GATAAGACGATAGATTCAAGTTCTATCTCACC-AAAAGGGTAAGACATCAATTAGAGTTTTGATACACCGTGATTGGGTTCAAGTTCCATAGAATTATGGCGTAACACGCCTTACATGGGTAAGACATTGAGTTTG-----AT-C-CAAT-GC-AT---AAAATGATGACTAAGAAAAATAATATATTTTTGATGAAATGTCTTTAAATTCATCATATTGAATTTGCTCCATTTCTTGAAAAGAATATGGTAGCAACATGTGATAACTCTGAAATCCACCTGTTGACTTGCTCCATTCAATCATATGAATGT-GGTAGCAGTGAATGATTAGTTTGAAAGATGACAAATAATTAATGATATAGAATAAGGGAGTGGAGGGAAAGAATTATAATAGTCATCATTGTGGTAATGATAAAAGGAAGAACACTATGAGTTCTTCAAATAGTCCTTCAAAATGTGAAGGCAACTTTTATTATCAAAATGGTATGAAAGGTTATTAGACTTGTCAATGTTGTCAACCCCATAATTTGACAAGTTTATAAATCCTCTATCATGACACAAGAAGATAAAGTGATGGTACACTTCATCTTTCAAAGTGATGTTGAGGTGTGTCATGGAAATATGATGAATTTTAAAGCCATGACAATGTGCTTATAATGCAAATTTATGAAGTACATATAAATAATTAGTTCATTCCTTGAAGAGAATGTGACTTGTGATGAGTATCGTGAATGCTCGACCATTCTATAAAAGAATGGGTCCAAATGTGATAAAATCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E542836" ref_strand="+" ref_description="SGN-E542836 [TUS-64-F12](-)">
      <seq>aaaatgatgactaagaaaatcattatatttttgatgaaaatgtctgaaaattcatcatattgaatttgctccattccttgaaaagaatgtggtagcaacatgtgataactctgaaatccgcctgttgacttgctccattcaatcatatgaatgtggtagcagtgaatgattagtctgaaagatgacaaataattaatgatatgaataaaggcgtggaaggacagaattataatagtcatcattgtggtaatgataaaaggaataacaatatgagttcttcaaatagtccttcaaaatgtgaagacaatttttattatgaaaatggtatgaaaagtcattagacttgtgaatgttgtcaacccaataacttgacaagtttataaatcctctatcatgatataagaagataaagtgatggtacactttatctttcaaagtgatgttgaggtgtgtcatggaaatatgatgaattttaaagtcatgacaatgtgcttataatgcaaatttataaagtacatatgaataattagtccaatctttgaagagaatgtgacttgtaatgagtatcgtgaatgctcgaccattctataagagaatgggtccagatgtgataaaatcattatgggttggatatatgtcacaactcacctctatagaaggtttgaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="+" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="41981" stop="43252"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42281" g_stop="42956" g_length="676"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="676" r_length="676" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="+" ref_id="SGN-E542836" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>676</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E542836" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42281" e_stop="42956"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATGATGACTAAGAAAAATAATATATTTTTGATG-AAATGTCTTGAAATTCATCATATTGAATTTGCTCCATTCCTTTAAAAGAATGTGGTAGCAACATGTGATAACTCTAAAATTCACCTATTGACTTGCTCCATTCAATCATATGAATGTGGGTAGCAGTGAATGATTAGTCTGAAAGATGATAAATAATTAATGATATGAATAAGGGCGTGGAGGGACAGAATTATAATAGTCATCATTGTGGTAATAATAAAAGGAAGAACACTATGAGTTCTTCAAATAGTCCTTCAAAATGTGAAGACAATTTTTATTATCAAAATGGTACGAAAGGCCATTAGACTTGTGAATGTTGTCAACCCAATAATTTGATAAGTTTATAAATCCTCTATCATGATACAAGAAGATAAAGTGATGGTACACTTAATCTTTCAAATTGATGTTGAGGTGTGTCATGGAAATATGATTAATTTTAAAGCCATGACAATGTGCTTATAATACAAATTTATGAAGTACATATAAATAATTAGTCCATTCCTTGAAGAGAATGTGACTTGTGATGAGTATCGTGAATGTTCGATCATTCTATAAGAGAATGGGTCCAGATGTGATAAAATCATTATGGGTTGGATATATTCCACAACTCACCTCTATGGAAGGTTTGAGAAAAAATGAT</genome_strand>
        <mrna_strand>AAAATGATGACTAAGAAAATCATTATATTTTTGATGAAAATGTCTGAAAATTCATCATATTGAATTTGCTCCATTCCTTGAAAAGAATGTGGTAGCAACATGTGATAACTCTGAAATCCGCCTGTTGACTTGCTCCATTCAATCATATGAATGT-GGTAGCAGTGAATGATTAGTCTGAAAGATGACAAATAATTAATGATATGAATAAAGGCGTGGAAGGACAGAATTATAATAGTCATCATTGTGGTAATGATAAAAGGAATAACAATATGAGTTCTTCAAATAGTCCTTCAAAATGTGAAGACAATTTTTATTATGAAAATGGTATGAAAAGTCATTAGACTTGTGAATGTTGTCAACCCAATAACTTGACAAGTTTATAAATCCTCTATCATGATATAAGAAGATAAAGTGATGGTACACTTTATCTTTCAAAGTGATGTTGAGGTGTGTCATGGAAATATGATGAATTTTAAAGTCATGACAATGTGCTTATAATGCAAATTTATAAAGTACATATGAATAATTAGTCCAATCTTTGAAGAGAATGTGACTTGTAATGAGTATCGTGAATGCTCGACCATTCTATAAGAGAATGGGTCCAGATGTGATAAAATCATTATGGGTTGGATATATGTCACAACTCACCTCTATAGAAGGTTTGAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E204533" ref_strand="-" ref_description="SGN-E204533 [cLEC-24-G13]">
      <seq>aatttttattatgaaaatggtatgaaaagtcattagacttgtgaatgttgtcaacccaataacttgacaagtttataaatcctctatcatgatataagaagataaagtgatggtacactttatctttcaaagtgatgttgaggtgtgtcatggaaatatgatgaattttaaagtcatgacaatgtgcttataatgcaaatttataaagtacatatgaataattagtccaatctttgaagagaatgtgacttgtaatgagtatcgtgaatgctcgaccattctataagagaatgggtccagatgtgataaaatcattatgggttggatatatgtcacaactcacctctatagaaggttttgaaaaaaaaaaaaaaaaaactcggactagttctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="+" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="42286" stop="43259"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42586" g_stop="42939" g_length="354"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="354" r_length="354" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="361" polyA_stop="379"/>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="+" ref_id="SGN-E204533" ref_strand="-">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>354</cumulative_length_of_scored_exons>
        <coverage percentage="0.901" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E204533" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="42586" e_stop="42939"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTTTATTATCAAAATGGTACGAAAGGCCATTAGACTTGTGAATGTTGTCAACCCAATAATTTGATAAGTTTATAAATCCTCTATCATGATACAAGAAGATAAAGTGATGGTACACTTAATCTTTCAAATTGATGTTGAGGTGTGTCATGGAAATATGATTAATTTTAAAGCCATGACAATGTGCTTATAATACAAATTTATGAAGTACATATAAATAATTAGTCCATTCCTTGAAGAGAATGTGACTTGTGATGAGTATCGTGAATGTTCGATCATTCTATAAGAGAATGGGTCCAGATGTGATAAAATCATTATGGGTTGGATATATTCCACAACTCACCTCTATGGAAG</genome_strand>
        <mrna_strand>AATTTTTATTATGAAAATGGTATGAAAAGTCATTAGACTTGTGAATGTTGTCAACCCAATAACTTGACAAGTTTATAAATCCTCTATCATGATATAAGAAGATAAAGTGATGGTACACTTTATCTTTCAAAGTGATGTTGAGGTGTGTCATGGAAATATGATGAATTTTAAAGTCATGACAATGTGCTTATAATGCAAATTTATAAAGTACATATGAATAATTAGTCCAATCTTTGAAGAGAATGTGACTTGTAATGAGTATCGTGAATGCTCGACCATTCTATAAGAGAATGGGTCCAGATGTGATAAAATCATTATGGGTTGGATATATGTCACAACTCACCTCTATAGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E273497" ref_strand="+" ref_description="SGN-E273497 [cLEN-3-J16]">
      <seq>ttcagacacctggattgtttcaaggattttcatataaccttcattacaatttttcattacatgcattcaagtttttcatatgttgccagatcaaaacaaacctcattgcatccaccaaaggagaaaacatctccaataatgtcaggatttttgcgataaacctttatgccccaaggcacaaaccgtatttgatatcttacggttatactatcacataataatttatttgtaccccactgacattataccttgatttatggactaccagtccaaaatgtcacttttctaagtgaaacaaaatatacttgaattgtgcattttacttggctaaccatttatctgttcacactatatgacagatttgaattcaagatcctcatcacaatttatatcattgagcgctacctcatatcaaagataccgtcgacggttatttgatatcgattccaacaagacataacttatcgagatctcttcaatttttttcattatttcaggtacctgaacctttttcaagattttatgaagtgttatgtcaatgtgctcctttatagcacttgcctcattatcatgaccatattgatcatttgctccttccttctttaaggaattttatatttggaatcaattggtctattacgctttcggcgtatcataaactctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="45378" stop="44105"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45078" g_stop="44405" g_length="674"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="664" r_length="664" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E273497" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>674</cumulative_length_of_scored_exons>
        <coverage percentage="1.015" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E273497" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45078" e_stop="44405"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAGACACCTCGATTGTTTCAAAGATTTTCATATAACCTTCATTGTCTATCTAGACATTACAATTATTCATTACATGCATTCAAGTA-TTCATATGTTGCCAGATCAAAACAAACCTTATTGCATCCAACAAAGGAGAAAACATCTCCAATAATGTCAGGATTTTTGCGATAAACCTTTATGCCCCAAGGCACAAATCGTATTTGATATCTTACGGTTATTCTATCGCATAATAATTTATATTTACCCCACTGACATTATACCTTGATTTATAGACTACCAGTCCAAAATGTCACTTTTCTAAGTGAAACAAAATATACTTGAATTGTGCATTTTACTTGGCCAACCATTTATCTGTCCACACTATATGACAGATTTGAATTCAAGATCCTTGTCACAATTTATATCATTCAGCGCTACCTCATATCAAAGTTACCGTC-ACGGTTATTTGATATCCATTCCAACAAGACATAACTTATCGAGATCTCTTC-A--TTTTTCATTATTTCAGGTACCTGAACCTTTTTCAAGATTTTATGAAGTGTTATGTCAATGTGCTCCTTTATAGCACTTGTCTCATTATCATGACCATATTGATCATTTGTTCCTTCCTTCTTCAAGGAATTTTATATTTGGAATCAATTGGTCTATTACACTTCCGGCGTATCATAGACTCTG</genome_strand>
        <mrna_strand>TTCAGACACCTGGATTGTTTCAAGGATTTTCATATAACCTTCA---T-TA-C---A-AT-----TT-TTCATTACATGCATTCAAGTTTTTCATATGTTGCCAGATCAAAACAAACCTCATTGCATCCACCAAAGGAGAAAACATCTCCAATAATGTCAGGATTTTTGCGATAAACCTTTATGCCCCAAGGCACAAACCGTATTTGATATCTTACGGTTATACTATCACATAATAATTTATTTGTACCCCACTGACATTATACCTTGATTTATGGACTACCAGTCCAAAATGTCACTTTTCTAAGTGAAACAAAATATACTTGAATTGTGCATTTTACTTGGCTAACCATTTATCTGTTCACACTATATGACAGATTTGAATTCAAGATCCTCATCACAATTTATATCATTGAGCGCTACCTCATATCAAAGATACCGTCGACGGTTATTTGATATCGATTCCAACAAGACATAACTTATCGAGATCTCTTCAATTTTTTTCATTATTTCAGGTACCTGAACCTTTTTCAAGATTTTATGAAGTGTTATGTCAATGTGCTCCTTTATAGCACTTGCCTCATTATCATGACCATATTGATCATTTGCTCCTTCCTTCTTTAAGGAATTTTATATTTGGAATCAATTGGTCTATTACGCTTTCGGCGTATCATAAACTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E273387" ref_strand="+" ref_description="SGN-E273387 [cLEN-3-J20]">
      <seq>ttcagacacctggattgtttcaaggattttcatataaccttcattacaatttttcattacatgcattcaagtttttcatatgttgccagatcaaaacaaacctcattgcatccaccaaaggagaaaacatctccaataatgtcaggatttttgcgataaacctttatgccccaaggcacaaaccgtatttgatatcttacggttatactatcacataataatttatttgtaccccactgacattataccttgatttatggactaccagtccaaaatgtcacttttctaagtgaaacaaaatatacttgaattgtgcattttacttggctaaccatttatctgttcacactatatgacagatttgaattcaagatcctcatcacaattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="45378" stop="44377"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45078" g_stop="44677" g_length="402"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="388" r_length="388" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E273387" ref_strand="+">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>402</cumulative_length_of_scored_exons>
        <coverage percentage="1.036" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E273387" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45078" e_stop="44677"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAGACACCTCGATTGTTTCAAAGATTTTCATATAACCTTCATTGTCTATCTAGACATTACAATTATTCATTACATGCATTCAAGTA-TTCATATGTTGCCAGATCAAAACAAACCTTATTGCATCCAACAAAGGAGAAAACATCTCCAATAATGTCAGGATTTTTGCGATAAACCTTTATGCCCCAAGGCACAAATCGTATTTGATATCTTACGGTTATTCTATCGCATAATAATTTATATTTACCCCACTGACATTATACCTTGATTTATAGACTACCAGTCCAAAATGTCACTTTTCTAAGTGAAACAAAATATACTTGAATTGTGCATTTTACTTGGCCAACCATTTATCTGTCCACACTATATGACAGATTTGAATTCAAGATCCTTGTCACAATTT</genome_strand>
        <mrna_strand>TTCAGACACCTGGATTGTTTCAAGGATTTTCATATAACCTTCA---T-TA-C---A-AT-----TT-TTCATTACATGCATTCAAGTTTTTCATATGTTGCCAGATCAAAACAAACCTCATTGCATCCACCAAAGGAGAAAACATCTCCAATAATGTCAGGATTTTTGCGATAAACCTTTATGCCCCAAGGCACAAACCGTATTTGATATCTTACGGTTATACTATCACATAATAATTTATTTGTACCCCACTGACATTATACCTTGATTTATGGACTACCAGTCCAAAATGTCACTTTTCTAAGTGAAACAAAATATACTTGAATTGTGCATTTTACTTGGCTAACCATTTATCTGTTCACACTATATGACAGATTTGAATTCAAGATCCTCATCACAATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E391540" ref_strand="+" ref_description="SGN-E391540 [TUS-16-I1]">
      <seq>acgaggatcttgaattcaaatctgtcatatagtgtggacagattaatggttgaccaagtaaaatgcacaattcaagtatattttgtttcacttagaaaagtgacattttggactggtagtccataaatcaaggtataatgtcagtggggtacaaataaattattatgcaataatataaccgtaagatatcaaatacggtttgtgtcttggggcataaaggtttatcgcaaaaatcctgacattattggagatgttttctcctttggtggatgcaatgaggtttgttttgatctggcaacatatgaaaagcttgaatgcatgtaatgaataattgtaatgtctagctagacaatgaaggttatatgaaaatccttgaaacaatcgaggtgtctgaagcatacaagagtttgaaagaaactttttcaataaagcttcaagaatccttatatggattgaaatagtcaaggaagaaaagggtacaaaagaatgatcctaattgtccttgtatttttatgaaaaggtcttggtaagacaaaattttgtcttgacctacagattgttaatttgacaaataaaatatttgtctaacagtgcacatacactgaaaaattttgatgcaattttatgtggatatatcgcattcattgagtaccccaatgattatgagatcacttgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="+" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="44385" stop="45659"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44685" g_stop="45361" g_length="677"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="677" r_length="677" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="+" ref_id="SGN-E391540" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>677</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E391540" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44685" e_stop="45361"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAGGATCTTGAATTCAAATCTGTCATATAGTGTGGACAGATAAATGGTTGGCCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGGTAGTCTATAAATCAAGGTATAATGTCAGTGGGGTAAATATAAATTATTATGCGATAGAATAACCGTAAGATATCAAATACGATTTGTGCCTTGGGGCATAAAGGTTTATCGCAAAAATCCTGACATTATTGGAGATGTTTTCTCCTTTGTTGGATGCAATAAGGTTTGTTTTGATCTGGCAACATATGAATA-CTTGAATGCATGTAATGAATAATTGTAATGTCTAGATAGACAATGAAGGTTATATGAAAATCTTTGAAACAATCGAGGTGTCTGAAGCATATAAGAGTTTGAAAGAAACTTTTCCAATAAAGCTTCAAGAATCCTTATATGAATTGAAATAGTCAAGGAAGAAAAAGGGTACAAAAGAATGACCCTAATTGTCCTTGTATTTTTATGAAAATGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAAATTGATAATTTGACAAATGAAATATTTGTCTAACAGTGCATATACACTGAAAAGTTTTGATGCAATTTTATATGGATAAATTACATTCATTAAGTACCCCAATGATTATGATATCACTTGAG</genome_strand>
        <mrna_strand>ACGAGGATCTTGAATTCAAATCTGTCATATAGTGTGGACAGATTAATGGTTGACCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATTATTATGCAATAATATAACCGTAAGATATCAAATACGGTTTGTGTCTTGGGGCATAAAGGTTTATCGCAAAAATCCTGACATTATTGGAGATGTTTTCTCCTTTGGTGGATGCAATGAGGTTTGTTTTGATCTGGCAACATATGAAAAGCTTGAATGCATGTAATGAATAATTGTAATGTCTAGCTAGACAATGAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAGCATACAAGAGTTTGAAAGAAACTTTTTCAATAAAGCTTCAAGAATCCTTATATGGATTGAAATAGTCAAGGAAG-AAAAGGGTACAAAAGAATGATCCTAATTGTCCTTGTATTTTTATGAAAAGGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAGATTGTTAATTTGACAAATAAAATATTTGTCTAACAGTGCACATACACTGAAAAATTTTGATGCAATTTTATGTGGATATATCGCATTCATTGAGTACCCCAATGATTATGAGATCACTTGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E205808" ref_strand="+" ref_description="SGN-E205808 [cLEC-20-M21]">
      <seq>cgaggatcttgaattcaaatctgtcatatagtgtggacagattaatggttgaccaagtaaaatgcacaattcaagtatattttgtttcacttagaaaagtgacattttggactggtagtccataaatcaaggtataatgtcagtggggtacaaataaattattatgcaataatataaccgtaagatatcaaatacggtttgtgtcttggggcataaaggtttatcgcaaaaatcctgacattattggagatgttttctcctttggtggatgcaatgaggtttgttttgatctggcaacatatgaaaagcttgaatgcatgtaatgaataattgtaatgtctagctagacaatgaaggttatatgaaaatccttgaaacaatcgaggtgtctgaagcatacaagagtttgaaagaaactttttcaataaagcttcaagaatccttatatggattgaaatagtcaaggaagaaaagggtacaaaagaatgatcctaattgtccttgtatttttatgaaaaggtcttggtaagacaaaattttgtcttgacctacag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="+" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="44386" stop="45538"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44686" g_stop="45239" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="554" r_length="554" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="+" ref_id="SGN-E205808" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E205808" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44686" e_stop="45239"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGGATCTTGAATTCAAATCTGTCATATAGTGTGGACAGATAAATGGTTGGCCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGGTAGTCTATAAATCAAGGTATAATGTCAGTGGGGTAAATATAAATTATTATGCGATAGAATAACCGTAAGATATCAAATACGATTTGTGCCTTGGGGCATAAAGGTTTATCGCAAAAATCCTGACATTATTGGAGATGTTTTCTCCTTTGTTGGATGCAATAAGGTTTGTTTTGATCTGGCAACATATGAATA-CTTGAATGCATGTAATGAATAATTGTAATGTCTAGATAGACAATGAAGGTTATATGAAAATCTTTGAAACAATCGAGGTGTCTGAAGCATATAAGAGTTTGAAAGAAACTTTTCCAATAAAGCTTCAAGAATCCTTATATGAATTGAAATAGTCAAGGAAGAAAAAGGGTACAAAAGAATGACCCTAATTGTCCTTGTATTTTTATGAAAATGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAA</genome_strand>
        <mrna_strand>CGAGGATCTTGAATTCAAATCTGTCATATAGTGTGGACAGATTAATGGTTGACCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATTATTATGCAATAATATAACCGTAAGATATCAAATACGGTTTGTGTCTTGGGGCATAAAGGTTTATCGCAAAAATCCTGACATTATTGGAGATGTTTTCTCCTTTGGTGGATGCAATGAGGTTTGTTTTGATCTGGCAACATATGAAAAGCTTGAATGCATGTAATGAATAATTGTAATGTCTAGCTAGACAATGAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAGCATACAAGAGTTTGAAAGAAACTTTTTCAATAAAGCTTCAAGAATCCTTATATGGATTGAAATAGTCAAGGAAG-AAAAGGGTACAAAAGAATGATCCTAATTGTCCTTGTATTTTTATGAAAAGGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E202657" ref_strand="+" ref_description="SGN-E202657 [cLEC-19-H1]">
      <seq>gatcttgaattcaaatctgtcatatagtgtggacagattaatggttgaccaagtaaaatgcacaattcaagtatattttgtttcacttaaaaaagtgacattttggactggtagtccataaatcaaggtataatgtcagtggggtacaaataaattattatgcaataatataaccgtaagatatcaaatacgggttgcttcttggggcataaaggtttatcgcaaaaatcctgacattattggagatgttttctcctttggtggatgcaatgaggtttgatttgatctggcaacatatgaaaagcttgaatgcatgtaatgaataattgtaatgtctagctagacaatgaaggttatatgaaaatccttgaaacaatcgaggtgtctgaagcatacaagagtttgaaagaaactttttcaataaagcttcaagaatccttatatggattgaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="+" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="44390" stop="45442"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44690" g_stop="45142" g_length="453"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="454" r_length="454" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="+" ref_id="SGN-E202657" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>453</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E202657" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44690" e_stop="45142"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCTTGAATTCAAATCTGTCATATAGTGTGGACAGATAAATGGTTGGCCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGGTAGTCTATAAATCAAGGTATAATGTCAGTGGGGTAAATATAAATTATTATGCGATAGAATAACCGTAAGATATCAAATACGATTTGTGCCTTGGGGCATAAAGGTTTATCGCAAAAATCCTGACATTATTGGAGATGTTTTCTCCTTTGTTGGATGCAATAAGGTTTGTTTTGATCTGGCAACATATGAATA-CTTGAATGCATGTAATGAATAATTGTAATGTCTAGATAGACAATGAAGGTTATATGAAAATCTTTGAAACAATCGAGGTGTCTGAAGCATATAAGAGTTTGAAAGAAACTTTTCCAATAAAGCTTCAAGAATCCTTATATGAATTGAAAT</genome_strand>
        <mrna_strand>GATCTTGAATTCAAATCTGTCATATAGTGTGGACAGATTAATGGTTGACCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAAAAAAGTGACATTTTGGACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATTATTATGCAATAATATAACCGTAAGATATCAAATACGGGTTGCTTCTTGGGGCATAAAGGTTTATCGCAAAAATCCTGACATTATTGGAGATGTTTTCTCCTTTGGTGGATGCAATGAGGTTTGATTTGATCTGGCAACATATGAAAAGCTTGAATGCATGTAATGAATAATTGTAATGTCTAGCTAGACAATGAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAGCATACAAGAGTTTGAAAGAAACTTTTTCAATAAAGCTTCAAGAATCCTTATATGGATTGAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E267707" ref_strand="+" ref_description="SGN-E267707 [cLEI-12-K2]">
      <seq>ttgaccaagtaaaatgcacaattcaagtatattttgtttcacttagaaaagtgacattttggactggtagtccataaatcaaggtataatgtcagtggggtacaaataaattattatgcaataatataaccgtaagatatcaaatacggtttgtgtcttggggcataaaggtttatcgcaaaaatcctgacattattggagatgttttctcctttggtggatgcaatgaggtttgttttgatctggcaacatatgaaaagcttgaatgcatgtaatgaataattgtaatgtctagctagacaatgaaggttatatgaaaatccttgaaacaatcgaggtgtctgaagcatacaagagtttgaaagaaactttttcaataaagcttcaagaatccttatatggattgaaatagtcaaggaagaaaagggtacaaaagaatgatcctaattgtccttgtatttttatgaaaaggtcttggtaagacaaaattttgtcttgacctacagattgttaatttgacaaataaaatatttgtctaacagtgcacatacactgaaaaattttgatgcaattttatgtgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="+" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="44434" stop="45615"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44734" g_stop="45315" g_length="582"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="582" r_length="582" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="+" ref_id="SGN-E267707" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>582</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E267707" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44734" e_stop="45315"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGCCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGGTAGTCTATAAATCAAGGTATAATGTCAGTGGGGTAAATATAAATTATTATGCGATAGAATAACCGTAAGATATCAAATACGATTTGTGCCTTGGGGCATAAAGGTTTATCGCAAAAATCCTGACATTATTGGAGATGTTTTCTCCTTTGTTGGATGCAATAAGGTTTGTTTTGATCTGGCAACATATGAATA-CTTGAATGCATGTAATGAATAATTGTAATGTCTAGATAGACAATGAAGGTTATATGAAAATCTTTGAAACAATCGAGGTGTCTGAAGCATATAAGAGTTTGAAAGAAACTTTTCCAATAAAGCTTCAAGAATCCTTATATGAATTGAAATAGTCAAGGAAGAAAAAGGGTACAAAAGAATGACCCTAATTGTCCTTGTATTTTTATGAAAATGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAAATTGATAATTTGACAAATGAAATATTTGTCTAACAGTGCATATACACTGAAAAGTTTTGATGCAATTTTATATGGA</genome_strand>
        <mrna_strand>TTGACCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATTATTATGCAATAATATAACCGTAAGATATCAAATACGGTTTGTGTCTTGGGGCATAAAGGTTTATCGCAAAAATCCTGACATTATTGGAGATGTTTTCTCCTTTGGTGGATGCAATGAGGTTTGTTTTGATCTGGCAACATATGAAAAGCTTGAATGCATGTAATGAATAATTGTAATGTCTAGCTAGACAATGAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAGCATACAAGAGTTTGAAAGAAACTTTTTCAATAAAGCTTCAAGAATCCTTATATGGATTGAAATAGTCAAGGAAG-AAAAGGGTACAAAAGAATGATCCTAATTGTCCTTGTATTTTTATGAAAAGGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAGATTGTTAATTTGACAAATAAAATATTTGTCTAACAGTGCACATACACTGAAAAATTTTGATGCAATTTTATGTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E289962" ref_strand="+" ref_description="SGN-E289962 [cLET-9-B10]">
      <seq>ttgaaagaaacttatccaataaagcttcaagaattcttatatggattgaaatagtcaaggaagaaaaatggtacaaaagaatgaccctaattgtccttgtatttttatgaaaaggtcttggtaagacaaaattttgccttgacctacagattgataatttgacaaatgaaatatttgtctaacagtgcacatacactgaaaaattttgatgcaattttatatgaataaatcgcattcattgagtaccccaatgattatgagattacttgacataaatgatgattcagtttgatctcaaaagaaggatgatgagtttcttggtgatgaaactctatcttggtgcaatcagggcactagtgcatcttactaacaatattattccagatatttgttttgcagtaaatttact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="+" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="44791" stop="45799"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45091" g_stop="45499" g_length="409"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="409" r_length="409" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="+" ref_id="SGN-E289962" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>409</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E289962" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45091" e_stop="45499"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAAAGAAACTTTTCCAATAAAGCTTCAAGAATCCTTATATGAATTGAAATAGTCAAGGAAGAAAAAGGGTACAAAAGAATGACCCTAATTGTCCTTGTATTTTTATGAAAATGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAAATTGATAATTTGACAAATGAAATATTTGTCTAACAGTGCATATACACTGAAAAGTTTTGATGCAATTTTATATGGATAAATTACATTCATTAAGTACCCCAATGATTATGATATCACTTGAGATAAATGATGATTCAATTTGATCTCAAAAGAAGGATGAAGAGTTTCTTGGTGATGAAACTCTATCTTGGTGCAATCAGGGCACTAGTGCATCTTACTAACAATATTTGACTAGATATTTCTTTTGCAGTAAATTTACT</genome_strand>
        <mrna_strand>TTGAAAGAAACTTATCCAATAAAGCTTCAAGAATTCTTATATGGATTGAAATAGTCAAGGAAGAAAAATGGTACAAAAGAATGACCCTAATTGTCCTTGTATTTTTATGAAAAGGTCTTGGTAAGACAAAATTTTGCCTTGACCTACAGATTGATAATTTGACAAATGAAATATTTGTCTAACAGTGCACATACACTGAAAAATTTTGATGCAATTTTATATGAATAAATCGCATTCATTGAGTACCCCAATGATTATGAGATTACTTGACATAAATGATGATTCAGTTTGATCTCAAAAGAAGGATGATGAGTTTCTTGGTGATGAAACTCTATCTTGGTGCAATCAGGGCACTAGTGCATCTTACTAACAATATTATTCCAGATATTTGTTTTGCAGTAAATTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E380017" ref_strand="+" ref_description="SGN-E380017 [TUS-1-D13](-)">
      <seq>catcaagatttacgtggaaaccccttcgatgtgaagagtaaaaaaccacgggtccaaaagctccactataatcaccaagagttacaatattgttctccaaaattggccacaaaacaaagtgtcaaacaacgagcaacaacaaaataagattgctccaaatctagagaattaaaggagcaaaatcaccaatttcgcagctactgttcacgacagcaaaactgaagctgcagaccaccaaatccaactctgtcagttcctaatcaaagattgagatgaagataatatgctgtccaaaaatcagctcaatcggacaagaaacgaagcgggaatcgcaatttgaagttggttgttatggctggatttttgactgcgaatttctctcttttttctctcttttagctgctgaaaaactctctctgaaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="+" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="61839" stop="62861"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62139" g_stop="62562" g_length="424"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="425" r_length="425" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="+" ref_id="SGN-E380017" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>424</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E380017" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62139" e_stop="62562"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACCAAGATTTACGTGGAAAACCCTTCGATGTGAAGAGTAAAAAACCACGGGACCAAAAGCTCCACTATAATCACCAAGAGTTACAATATTGTTCTACAAAATTGACCACAAAACAAAGTGCCAAACAACGAGCAACAATAAAATAAGATTGCACCAAATCTAGAGAATTAAAGGAGCAAAATCACCAATTTCGCAGCTACTGTTCACGATAGCAAAACTGAAGCTGCAGACCACCAAATCCAACTCTGTCAGTTCCTAATCAAAGATTGAGATGAAGATAATATGCTGTCCAAAAATCAGCTCAATCGGACAAGAAACGAAGCGGGAATCGCAATTTGAAGTTGGTTGTTATGGCTGGATTTTTTACTGCGAATTTCTCTC-TTTTTCTCTCTTTTGGCTGCTGAAAAACTCTCTCTAAAAAAA</genome_strand>
        <mrna_strand>CATCAAGATTTACGTGGAAACCCCTTCGATGTGAAGAGTAAAAAACCACGGGTCCAAAAGCTCCACTATAATCACCAAGAGTTACAATATTGTTCTCCAAAATTGGCCACAAAACAAAGTGTCAAACAACGAGCAACAACAAAATAAGATTGCTCCAAATCTAGAGAATTAAAGGAGCAAAATCACCAATTTCGCAGCTACTGTTCACGACAGCAAAACTGAAGCTGCAGACCACCAAATCCAACTCTGTCAGTTCCTAATCAAAGATTGAGATGAAGATAATATGCTGTCCAAAAATCAGCTCAATCGGACAAGAAACGAAGCGGGAATCGCAATTTGAAGTTGGTTGTTATGGCTGGATTTTTGACTGCGAATTTCTCTCTTTTTTCTCTCTTTTAGCTGCTGAAAAACTCTCTCTGAAAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E204772" ref_strand="+" ref_description="SGN-E204772 [cLEC-14-E21]">
      <seq>caatctctatataaaagagcaaggtgctcgtcttcctttggcttaagaaatttgtccaagcccactcttgatacttataaacatctcttcctctgtagctagctagctagatttaaagagttgtcaagtttatccttcccttaacatgaaaatttttagttggattcaaaccaagttcaatggaaaacaaactacttgtaagtcaaatccagtggcggttacgcatcatatgttgcatcaagaattcagtgactggcctaatgaactacttgctattggtacatttggaagtttgaaaaatgatgggaagttgaaacaacaagatcaaagccttacagttgaagaagttggacagcttcacaaagaactaaaacatctatttcctgatcatgaagaaagtaataagataggatcaaataaggatcttgacaaattctttgactgtcttcaaaacttggtagatgatgatgatcacagagttattgaaaataaagaaaacattttcaaaaggagtaatagtactcttgttcatgttagaagccaagaacaatcttctaaattggacaacatgacaaatactggcattagcaagaaatctttgacatatctcctaaagaagacattgttctgtagcgcgggattcgcagcccctttgagagataatccactacttccacactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="+" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="67918" stop="69377"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68218" g_stop="68368" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="151" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68369" i_stop="68463" i_length="95">
            <donor d_prob="0.908" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68464" g_stop="68536" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="224" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="68537" i_stop="68620" i_length="84">
            <donor d_prob="0.483" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="68621" g_stop="69077" g_length="457"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="681" r_length="457" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="+" ref_id="SGN-E204772" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>681</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E204772" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68218" e_stop="68368"/>
          <exon e_start="68464" e_stop="68536"/>
          <exon e_start="68621" e_stop="69077"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATCTCTATATAAAAGAGCAAGGTGCTCGTCTTCCTTTGGCTTAAGAAATTTGTCCAAGCCCACTCTTGATACTTATAAACATCTCTTCCTCTGTAGCTAGCTAGCTAGATTTAAAGAGTTGTCAAGTTTATCCTTCCCTTAACATGAAAGTAAGTTCTCATTTTTATTTTAATTTTTTTGCATATGTTGAAGAAATGATTGTTATATTTGTTTAGATGGTAATGTCATTGCCTCATGATAACAGATTTTTAGTTGGATTCAAACCAAGTTCAATGGAAAACAAACTACTTGTAAGTCAAATCCAGTGGCGGTTACGCGTAAGTATTTATATGTGCAGTGCAGGGGAATACATCATACATGTTATCTGTTTTACTCAAATGCATGTCTTGTCTACTTGATAGATCATATGTTGCATCAAGAATTCAGTGACTGGCCTAATGAACTACTTGCTATTGGTACATTTGGAAGTTTGAAAAATGATGGGAAGTTGAAACAACAAGATCAAAGCCTTACAGTTGAAGAAGTTGGACAGCTTCACAAAGAACTAAAACATCTATTTCCTGATCATGAAGAAAGTAATAAGATAGGATCAAATAAGGATCTTGACAAATTCTTTGACTGTCTTCAAAACTTGGTAGATGATGATGATCACAGAGTTATTGAAAATAAAGAAAACATTTTCAAAAGGAGTAATAGTACTCTTGTTCATGTTAGAAGCCAAGAACAATCTTCTAAATTGGACAACATGACAAATACTGGCATTAGCAAGAAATCTTTGTCATATCTCCTAAAGAAGACATTGTTCTGTAGCGCGGGATTCGCAGCCCCTTTGAGAGATAATCCACTACTTCCACACTC</genome_strand>
        <mrna_strand>CAATCTCTATATAAAAGAGCAAGGTGCTCGTCTTCCTTTGGCTTAAGAAATTTGTCCAAGCCCACTCTTGATACTTATAAACATCTCTTCCTCTGTAGCTAGCTAGCTAGATTTAAAGAGTTGTCAAGTTTATCCTTCCCTTAACATGAAA...............................................................................................ATTTTTAGTTGGATTCAAACCAAGTTCAATGGAAAACAAACTACTTGTAAGTCAAATCCAGTGGCGGTTACGC....................................................................................ATCATATGTTGCATCAAGAATTCAGTGACTGGCCTAATGAACTACTTGCTATTGGTACATTTGGAAGTTTGAAAAATGATGGGAAGTTGAAACAACAAGATCAAAGCCTTACAGTTGAAGAAGTTGGACAGCTTCACAAAGAACTAAAACATCTATTTCCTGATCATGAAGAAAGTAATAAGATAGGATCAAATAAGGATCTTGACAAATTCTTTGACTGTCTTCAAAACTTGGTAGATGATGATGATCACAGAGTTATTGAAAATAAAGAAAACATTTTCAAAAGGAGTAATAGTACTCTTGTTCATGTTAGAAGCCAAGAACAATCTTCTAAATTGGACAACATGACAAATACTGGCATTAGCAAGAAATCTTTGACATATCTCCTAAAGAAGACATTGTTCTGTAGCGCGGGATTCGCAGCCCCTTTGAGAGATAATCCACTACTTCCACACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E375891" ref_strand="+" ref_description="SGN-E375891 [TUS-15-K2]">
      <seq>caatctctatataaaagagcaaggtgctcgtcttcctttggcttaagaaatttgtccaagcccactcttgatacttataaacatctcttcctctgtagctagctagctagatttaaagagttgtcaagtttatccttcccttaacatgaaaatttttagttggattcaaaccaagttcaatggaaaacaaactacttgtaagtcaaatccagtggcggttacgcatcatatgttgcatcaagaattcagtgactggcctaatgaactacttgctattggtacatttggaagtttgaaaaatgatgggaagttgaaacaacaagatcaaagccttacagttgaagaagttggacagcttcacaaagaactaaaacatctatttcctgatcatgaagaaagtaataagataggatcaaataaggatcttgacaaattctttgactgtcttcaaaacttggtagatgatgatgatcacagagttattgaaaataaagaaaacattttcaaaaggagtaatagtactcttgttcatgttagaagccaagaacaatcttctaaattggacaacatgacaaatactggcattagcaagaaatctttgtcatatctcctaaagaagacattgttctgtagcgcgggattcgcagcccctttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="+" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="67918" stop="69351"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68218" g_stop="68368" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="151" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68369" i_stop="68463" i_length="95">
            <donor d_prob="0.908" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68464" g_stop="68536" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="224" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="68537" i_stop="68620" i_length="84">
            <donor d_prob="0.483" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="68621" g_stop="69051" g_length="431"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="655" r_length="431" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="+" ref_id="SGN-E375891" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>655</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E375891" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68218" e_stop="68368"/>
          <exon e_start="68464" e_stop="68536"/>
          <exon e_start="68621" e_stop="69051"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATCTCTATATAAAAGAGCAAGGTGCTCGTCTTCCTTTGGCTTAAGAAATTTGTCCAAGCCCACTCTTGATACTTATAAACATCTCTTCCTCTGTAGCTAGCTAGCTAGATTTAAAGAGTTGTCAAGTTTATCCTTCCCTTAACATGAAAGTAAGTTCTCATTTTTATTTTAATTTTTTTGCATATGTTGAAGAAATGATTGTTATATTTGTTTAGATGGTAATGTCATTGCCTCATGATAACAGATTTTTAGTTGGATTCAAACCAAGTTCAATGGAAAACAAACTACTTGTAAGTCAAATCCAGTGGCGGTTACGCGTAAGTATTTATATGTGCAGTGCAGGGGAATACATCATACATGTTATCTGTTTTACTCAAATGCATGTCTTGTCTACTTGATAGATCATATGTTGCATCAAGAATTCAGTGACTGGCCTAATGAACTACTTGCTATTGGTACATTTGGAAGTTTGAAAAATGATGGGAAGTTGAAACAACAAGATCAAAGCCTTACAGTTGAAGAAGTTGGACAGCTTCACAAAGAACTAAAACATCTATTTCCTGATCATGAAGAAAGTAATAAGATAGGATCAAATAAGGATCTTGACAAATTCTTTGACTGTCTTCAAAACTTGGTAGATGATGATGATCACAGAGTTATTGAAAATAAAGAAAACATTTTCAAAAGGAGTAATAGTACTCTTGTTCATGTTAGAAGCCAAGAACAATCTTCTAAATTGGACAACATGACAAATACTGGCATTAGCAAGAAATCTTTGTCATATCTCCTAAAGAAGACATTGTTCTGTAGCGCGGGATTCGCAGCCCCTTTG</genome_strand>
        <mrna_strand>CAATCTCTATATAAAAGAGCAAGGTGCTCGTCTTCCTTTGGCTTAAGAAATTTGTCCAAGCCCACTCTTGATACTTATAAACATCTCTTCCTCTGTAGCTAGCTAGCTAGATTTAAAGAGTTGTCAAGTTTATCCTTCCCTTAACATGAAA...............................................................................................ATTTTTAGTTGGATTCAAACCAAGTTCAATGGAAAACAAACTACTTGTAAGTCAAATCCAGTGGCGGTTACGC....................................................................................ATCATATGTTGCATCAAGAATTCAGTGACTGGCCTAATGAACTACTTGCTATTGGTACATTTGGAAGTTTGAAAAATGATGGGAAGTTGAAACAACAAGATCAAAGCCTTACAGTTGAAGAAGTTGGACAGCTTCACAAAGAACTAAAACATCTATTTCCTGATCATGAAGAAAGTAATAAGATAGGATCAAATAAGGATCTTGACAAATTCTTTGACTGTCTTCAAAACTTGGTAGATGATGATGATCACAGAGTTATTGAAAATAAAGAAAACATTTTCAAAAGGAGTAATAGTACTCTTGTTCATGTTAGAAGCCAAGAACAATCTTCTAAATTGGACAACATGACAAATACTGGCATTAGCAAGAAATCTTTGTCATATCTCCTAAAGAAGACATTGTTCTGTAGCGCGGGATTCGCAGCCCCTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E266142" ref_strand="+" ref_description="SGN-E266142 [cLEI-6-D10]">
      <seq>ttgatacttataaacatctcttcctctgtagctagctagctagatttaaagagttgtcaagtttatccttcccttaacatgaaaatttttagttggattcaaaccaagttcaatggaaaacaaactacttgtaagtcaaatccagtggcggttacgcatcatatgttgcatcaagaattcagtgactggcctaatgaactacttgctattggtacatttggaagtttgaaaaatgatgggaagttgaaacaacaagatcaaagccttacagttgaagaagttggacagcttcacaaagaactaaaacatctatttcctgatcatgaagaaagtaataagataggatcaaataaggatcttgacaaattctttgactgtcttcaaaacttggtagatgatgatgatcacagagttattgaaaataaagaaaacattttcaaaaggagtaatagtactcttgttcatgttagaagccaagaacaatcttctaaattggacaacatgacaaatactggcattagcaagaaatctttgtcata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="+" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="67985" stop="69302"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68285" g_stop="68368" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="84" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68369" i_stop="68463" i_length="95">
            <donor d_prob="0.908" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68464" g_stop="68536" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="85" r_stop="157" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="68537" i_stop="68620" i_length="84">
            <donor d_prob="0.483" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="68621" g_stop="69002" g_length="382"/>
          <reference_exon_boundary r_type="cDNA" r_start="158" r_stop="539" r_length="382" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="+" ref_id="SGN-E266142" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>539</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E266142" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68285" e_stop="68368"/>
          <exon e_start="68464" e_stop="68536"/>
          <exon e_start="68621" e_stop="69002"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGATACTTATAAACATCTCTTCCTCTGTAGCTAGCTAGCTAGATTTAAAGAGTTGTCAAGTTTATCCTTCCCTTAACATGAAAGTAAGTTCTCATTTTTATTTTAATTTTTTTGCATATGTTGAAGAAATGATTGTTATATTTGTTTAGATGGTAATGTCATTGCCTCATGATAACAGATTTTTAGTTGGATTCAAACCAAGTTCAATGGAAAACAAACTACTTGTAAGTCAAATCCAGTGGCGGTTACGCGTAAGTATTTATATGTGCAGTGCAGGGGAATACATCATACATGTTATCTGTTTTACTCAAATGCATGTCTTGTCTACTTGATAGATCATATGTTGCATCAAGAATTCAGTGACTGGCCTAATGAACTACTTGCTATTGGTACATTTGGAAGTTTGAAAAATGATGGGAAGTTGAAACAACAAGATCAAAGCCTTACAGTTGAAGAAGTTGGACAGCTTCACAAAGAACTAAAACATCTATTTCCTGATCATGAAGAAAGTAATAAGATAGGATCAAATAAGGATCTTGACAAATTCTTTGACTGTCTTCAAAACTTGGTAGATGATGATGATCACAGAGTTATTGAAAATAAAGAAAACATTTTCAAAAGGAGTAATAGTACTCTTGTTCATGTTAGAAGCCAAGAACAATCTTCTAAATTGGACAACATGACAAATACTGGCATTAGCAAGAAATCTTTGTCATA</genome_strand>
        <mrna_strand>TTGATACTTATAAACATCTCTTCCTCTGTAGCTAGCTAGCTAGATTTAAAGAGTTGTCAAGTTTATCCTTCCCTTAACATGAAA...............................................................................................ATTTTTAGTTGGATTCAAACCAAGTTCAATGGAAAACAAACTACTTGTAAGTCAAATCCAGTGGCGGTTACGC....................................................................................ATCATATGTTGCATCAAGAATTCAGTGACTGGCCTAATGAACTACTTGCTATTGGTACATTTGGAAGTTTGAAAAATGATGGGAAGTTGAAACAACAAGATCAAAGCCTTACAGTTGAAGAAGTTGGACAGCTTCACAAAGAACTAAAACATCTATTTCCTGATCATGAAGAAAGTAATAAGATAGGATCAAATAAGGATCTTGACAAATTCTTTGACTGTCTTCAAAACTTGGTAGATGATGATGATCACAGAGTTATTGAAAATAAAGAAAACATTTTCAAAAGGAGTAATAGTACTCTTGTTCATGTTAGAAGCCAAGAACAATCTTCTAAATTGGACAACATGACAAATACTGGCATTAGCAAGAAATCTTTGTCATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E375890" ref_strand="+" ref_description="SGN-E375890 [TUS-15-K2](-)">
      <seq>aattggacaacatgacaaatactggcattagcaagaaatctttgtcatatctcctaaagaagacattgttctgtagcgcgggattcgcagcccctttgagagataatccactacttccacactccaaaattcagaaatcaaggatggaaaagattctgagggctatattacacaaaaagatatatcctcaagcaaatagtccaaggggtaatggcagtaccacaagaaagagatacatagacaatacatgtgtgattgagagtgatactgatcaagacgacgaagcatttgacactactgtgaagaatgggagcaaatgggataagtcagattctgatttcattgtactagagatatgattggcttcttgaaacatacatgagattgatttctgtttcatttggaattgcaaaattcggattcttctcaagttcttttttcttttttttggaagagtcaatcttccatgtattggtgttatatgatcatgagaagtacatatttcacttgatttttgccatgactagatgaggatatctgtttttgtcatggttggaaaaagttcatctactgaagtttcaataagaggggaagatttgtaatcttaattagccaagtgaattaatgacaaattggaattgttattttgatgcaatagtcttttcaagttaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="+" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="68654" stop="70161"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68954" g_stop="69105" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="152" r_length="152" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69106" i_stop="69178" i_length="73">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69179" g_stop="69365" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="153" r_stop="339" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69366" i_stop="69447" i_length="82">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.604" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="69448" g_stop="69491" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="340" r_stop="383" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="69492" i_stop="69574" i_length="83">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.726" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="69575" g_stop="69861" g_length="287"/>
          <reference_exon_boundary r_type="cDNA" r_start="384" r_stop="670" r_length="287" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="671" polyA_stop="681"/>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="+" ref_id="SGN-E375890" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>670</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E375890" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68954" e_stop="69105"/>
          <exon e_start="69179" e_stop="69365"/>
          <exon e_start="69448" e_stop="69491"/>
          <exon e_start="69575" e_stop="69861"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTGGACAACATGACAAATACTGGCATTAGCAAGAAATCTTTGTCATATCTCCTAAAGAAGACATTGTTCTGTAGCGCGGGATTCGCAGCCCCTTTGAGAGATAATCCACTACTTCCACACTCCAAAATTCAGAAATCAAGGATGGAAAAGGTTTGCACTCTTACTCATGCATTCTCCACATCTTTATGAAGTAATACCTAAAATTTAAATTTAAATATATCAGATTCTGAGGGCTATATTACACAAAAAGATATATCCTCAAGCAAATAGTCCAAGGGGTAATGGCAGTACCACAAGAAAGAGATACATAGACAATACATGTGTGATTGAGAGTGATACTGATCAAGACGACGAAGCATTTGACACTACTGTGAAGAATGGGAGCAAATGGGATAAGTCAGATTCTGATTGTAAGTTTTCTTATACTCGACCACTTCATGATCACTGTAATCATTTCATCTAAAAGTTCCGCTACATTCCTTTTTGTTGCAGTCATTGTACTAGAGATATGATTGGCTTCTTGAAACATACATGAGGTATATATGAACACCCTTGAAAAAGTACTTTGAATCATTATATATTCATCCAAGTGTCTCACATTTTTATTTTATTTTTGTAGATTGATTTCTGTTTCATTTGGAATTGCAAAATTCGGATTCTTCTCAAGTTCTTTTTTCTTTTTTTTGGAAGAGTCAATCTTCCATGTATTGGTGTTATATGATCATGAGAAGTACATATTTCACTTGATTTTTGCCATGACTAGATGAGGATATCTGTTTTTGTCATGGTTGGAAAAAGTTCATCTACTGAAGTTTCAATAAGAGGGGAAGATTTGTAATCTTAATTAGCCAAGTGAATTAATGACAAATTGGAATTGTTATTTTGATGCAATAGTCTTTTCTAGTT</genome_strand>
        <mrna_strand>AATTGGACAACATGACAAATACTGGCATTAGCAAGAAATCTTTGTCATATCTCCTAAAGAAGACATTGTTCTGTAGCGCGGGATTCGCAGCCCCTTTGAGAGATAATCCACTACTTCCACACTCCAAAATTCAGAAATCAAGGATGGAAAAG.........................................................................ATTCTGAGGGCTATATTACACAAAAAGATATATCCTCAAGCAAATAGTCCAAGGGGTAATGGCAGTACCACAAGAAAGAGATACATAGACAATACATGTGTGATTGAGAGTGATACTGATCAAGACGACGAAGCATTTGACACTACTGTGAAGAATGGGAGCAAATGGGATAAGTCAGATTCTGATT..................................................................................TCATTGTACTAGAGATATGATTGGCTTCTTGAAACATACATGAG...................................................................................ATTGATTTCTGTTTCATTTGGAATTGCAAAATTCGGATTCTTCTCAAGTTCTTTTTTCTTTTTTTTGGAAGAGTCAATCTTCCATGTATTGGTGTTATATGATCATGAGAAGTACATATTTCACTTGATTTTTGCCATGACTAGATGAGGATATCTGTTTTTGTCATGGTTGGAAAAAGTTCATCTACTGAAGTTTCAATAAGAGGGGAAGATTTGTAATCTTAATTAGCCAAGTGAATTAATGACAAATTGGAATTGTTATTTTGATGCAATAGTCTTTTCAAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E439930" ref_strand="+" ref_description="SGN-E439930 [cSTA-14-M1]">
      <seq>tttgcattgtatctgagacatggttgtggtaagaggatgatgtactattttcgagagtcgtatcgcgcgccgcgatggatattatatttcgagggacgtatcgcgcgccgcgaaggttactattttatcgagggtcgtgtcgtgcaccgcgacagatgcatggatacatatgtcccccatgggtcccagactgagagacagcgggtgtgtatcgttaagaaagacatgcatcacgatatttgacattgcatctcatggcattgcacatttttattattgatgaacttgaacatgtgtttttgctgatcttgtgattgtttctctgtgaagcttgtgactgttgaatattgagttgttattgagaatgtgtaaactgatagagcgtggttattgattggtgttcttggtaaactgttaggctgtagcgtggaggtttagatagggcgtaaggagtacccgtattcttttcacttaacttgtgtttagaggtttgcttgttgggtaccgcgtggtttggtactcaccccttgcttttataattttttgtaggttacgagcccgaatttttgtgatatcttccattctcttcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="71612" stop="70462"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71303" g_stop="70762" g_length="542"/>
          <reference_exon_boundary r_type="cDNA" r_start="46" r_stop="590" r_length="545" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E439930" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>542</cumulative_length_of_scored_exons>
        <coverage percentage="0.919" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E439930" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71303" e_stop="70762"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATATTTTGAGGGACGTATCGCGCGCCGCGATGGATACTATATTTCGAGGGACGTATCGCGCGCCGCGATGGTTACTA--TTATCGAGGATCGTGTCGTGCGCCGCGACAGATGCATGGACAGATATGTCCCCCATGGGTCCCGGACTGAGAGACAGCGGGTGTGTATCGTTAAGAAAGACATGCATCACGATATTTGACATTGCATCTCATGGCATTGCACA-TTTTATTATTGATGAACTTGAACATGTG-TTTTGCTAATCTTGTGAATGTTTCTCTGTGAAGTTTGTGATTGTTGAATATTGAGTTGTTATTGAGAATGTGTAAACAGATAGAGTGTGGTTATTGAGTGGTGTGTTTGGTAAACTGTTAGGCTGTAGCGTGGAGGTTTAGATAGGGTGTAAGGAGTACCCGTATTTTGTTCACTTAACTTGTATTTAGAGGTTTGCTTGTTGGGTACCGCGTGGTTTGGTACTCACCCCTTGCTTCTACAAATTTTTGTAGGTTACGAGCCTGGATCTTTGTGATACCTTCTATTCTCTTCG</genome_strand>
        <mrna_strand>TAT-TTTCGAGAGTCGTATCGCGCGCCGCGATGGATATTATATTTCGAGGGACGTATCGCGCGCCGCGAAGGTTACTATTTTATCGAGGGTCGTGTCGTGCACCGCGACAGATGCATGGATACATATGTCCCCCATGGGTCCCAGACTGAGAGACAGCGGGTGTGTATCGTTAAGAAAGACATGCATCACGATATTTGACATTGCATCTCATGGCATTGCACATTTTTATTATTGATGAACTTGAACATGTGTTTTTGCTGATCTTGTGATTGTTTCTCTGTGAAGCTTGTGACTGTTGAATATTGAGTTGTTATTGAGAATGTGTAAACTGATAGAGCGTGGTTATTGATTGGTGTTCTTGGTAAACTGTTAGGCTGTAGCGTGGAGGTTTAGATAGGGCGTAAGGAGTACCCGTATTCTTTTCACTTAACTTGTGTTTAGAGGTTTGCTTGTTGGGTACCGCGTGGTTTGGTACTCACCCCTTGCTTTTATAATTTTTTGTAGGTTACGAGCCCGAATTTTTGTGATATCTTCCATTCTCTTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E352117" ref_strand="+" ref_description="SGN-E352117 [cTOS-13-N24]">
      <seq>tttgatcctgcctccacattttcatatgtatcttcctcatttgctactgttcttaatttacatagtgaatcgcttgacatacctattcgtgttctactccggtgggtgagtctgtgattgttgaaaaggtgtataggtcttgtcttgtgacatttgtgggagcaatactcatgtagacttggttatcctataaatggttgacttcgatgtaattctgggtatgacttggctgtctccaaattttgcaatcttggattgtaatgctaaaactgtaacgttggccaagcctgagatagatgcgttagtgtgggagggtgactacacttccactccagttcgtatcatctcctttctttgtgctaagagaatggttagtaaagggtgtttagctttcttggcacacctcagggatgatactacccaagtaccttcaattgagtcagtttcgatagtccgtgagtttctggatgtgtttcctgcagaccttcctggtatgccaccggatagggatattgacttttgcattgatctggagccgggtgatcaccccatttccatacccccttatagaatggctcccgctgagttgggggagttaaaggcccaacttcaagagttgttangtaagggcttcattangccaagtgcatccccttggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="82200" stop="80940"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81900" g_stop="81240" g_length="661"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="659" r_length="659" r_score="0.924"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E352117" ref_strand="+">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E352117" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81900" e_stop="81240"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGATCCTGGATCCACATTTTCATATGTATCTTCCTCATTTGCTACTGGTCTTAATTTACATTGTGAATTGCTTGACATGCCTATTCGTGTTTCTACTCCGGTGGGTGAGTCTGTGATAGTCGAAAAGGTGTATAGGTCTTGTCTTGTGACTTTTATGGAGAGTAATACTCATGTAGACTTGGTTATCTTAGAAATGGTTGATTTTGATGTAATTCTGGGTATGACTTGGCTTTCTCCAAATTTCGCAATCTTAGATTGTAATGCTAAAACTATAACGTTGGCCAAGCCTGGGACAGATCCGTTAGTGTGGGAGGGTGACTACACTTCCAGTCCAGTTTGTATCATCTCCTTTCTTCGTGCTAAGAGAATGGTTAGTAAAGGGTGCTCAGCTTTCTTGGCACATCTCCGGGATGATACTACCCAGGTACCTTCAATTGAGTCGGTTCCGGTAGTCCGTGAGTTTCTGGATGTGTTTCCTGCAGACCTTCCTGGTATGCCACCGGATAGAGATATTGACTTTTGCATTGATCTGGAGCCGGGTACTGGCCCCATTTCCATACCTCCTTATAGAATGGCTCCAGCAGAGTTAAGGGAGTTAAAGGCCCAACTTCAAGAGTTGTTAAGTAAAGGTTTCATTAGACCAAGTGCATCCCCTTGGG</genome_strand>
        <mrna_strand>TTTGATCCTGCCTCCACATTTTCATATGTATCTTCCTCATTTGCTACTGTTCTTAATTTACATAGTGAATCGCTTGACATACCTATTCGTG-TTCTACTCCGGTGGGTGAGTCTGTGATTGTTGAAAAGGTGTATAGGTCTTGTCTTGTGACATTTGTGG-GAGCAATACTCATGTAGACTTGGTTATCCTATAAATGGTTGACTTCGATGTAATTCTGGGTATGACTTGGCTGTCTCCAAATTTTGCAATCTTGGATTGTAATGCTAAAACTGTAACGTTGGCCAAGCCTGAGATAGATGCGTTAGTGTGGGAGGGTGACTACACTTCCACTCCAGTTCGTATCATCTCCTTTCTTTGTGCTAAGAGAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACACCTCAGGGATGATACTACCCAAGTACCTTCAATTGAGTCAGTTTCGATAGTCCGTGAGTTTCTGGATGTGTTTCCTGCAGACCTTCCTGGTATGCCACCGGATAGGGATATTGACTTTTGCATTGATCTGGAGCCGGGTGATCACCCCATTTCCATACCCCCTTATAGAATGGCTCCCGCTGAGTTGGGGGAGTTAAAGGCCCAACTTCAAGAGTTGTTANGTAAGGGCTTCATTANGCCAAGTGCATCCCCTTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E352716" ref_strand="+" ref_description="SGN-E352716 [cTOS-11-H19]">
      <seq>gatctgtcccaggcttggctaacgtcacagttttagcattacaatccaagattgcaaaatttggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaagtctacataagtattgctccccacaaaagtcaccagaccagacctatatactttttcaactatcacagactcacccaccggagtagaaacacgaataggcatgtcaagcaattcataatttaatttaagaccagtagcaaatgaggaagatacatatgaaaatgtggatccagggtcaaataatacaaaagccatgcaatcacaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="+" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="81300" stop="82230"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81600" g_stop="81930" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="331" r_length="331" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="+" ref_id="SGN-E352716" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>331</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E352716" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81600" e_stop="81930"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCTGTCCCAGGCTTGGCCAACGTTATAGTTTTAGCATTACAATCTAAGATTGCGAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAGTCTACATGAGTATTACTCTCCATAAAAGTCACAAGACAAGACCTATACACCTTTTCGACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAATTCACAATGTAAATTAAGACCAGTAGCAAATGAGGAAGATACATATGAAAATGTGGATCCAGGATCAAATAATACAAAAGCCATGCAATCACCAACCAA</genome_strand>
        <mrna_strand>GATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAGTCTACATAAGTATTGCTCCCCACAAAAGTCACCAGACCAGACCTATATACTTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAATTCATAATTTAATTTAAGACCAGTAGCAAATGAGGAAGATACATATGAAAATGTGGATCCAGGGTCAAATAATACAAAAGCCATGCAATCACAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E317478" ref_strand="+" ref_description="SGN-E317478 [cTOA-28-N12]">
      <seq>agatgcaaatgaaatctgcagtaagagcatatagttcttctattaaaaaagaatttctttgtgatcaatccaaaagtaaaagttggaaatttatttgcaagcgtcatgagttatggtgtgattggatgattcggtttagagagatctcaagcgatatgtggaagacagaaaaaatgattgaaccgcatacttgtcttacagataattataaggaggatcatttcaatttgattgataacatgattgccacttcattaataccatatgttatgcaaaattcggacataaatattaagatgatccgtgaaattatcaaaggaaagcatcactatactcctagttatagaaaattacaaaaaggtcgaagaaaagcatttcgaatggtttatggtgattttgaaagttcatttaaagcattacctcgatacatggctgcactacaattattcaatccaggcactattattgagtgggagcatcattctacaacaatgcaagatgagcaaatttttaaatttctttttagggcttttaaacagagcattgatggtttcaaaagttgtaggctggtcatttctatcgacggcacacatctttatggtttgtataatatcaaattgttaattgcggttggaattgacgcggatggaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="+" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="85646" stop="86898"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85946" g_stop="86598" g_length="653"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="653" r_length="653" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="+" ref_id="SGN-E317478" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>653</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E317478" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85946" e_stop="86598"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATGCAAATGAAATCTGTAGTAAGAGCATACAGTCTTGCTATTAAAAAAGAATTTCTTTGTGATCAATCCAAAAGTAAAAGTTGGAAAGTTATTTGCAAGCGTCATGAGTTAGGGTGTGATTGGATGATTAGGTTTAGAGAGATTTCAAGCGGTATGTGGAAGACAGGAAAAATGATTGAACCGCATACTTGTCTTACAGATAACTATAAGGAGGATTATTTCAATTTGAATGATCACATGATTGACACTTCATTAATACCATATGTTATATAAAATCCGGACATAAATATTAAGATGATCCGTGAAATTATCAAAGGAAAACATCACTATACTCCTAGTTATAGAAAAGAACAAAAAGGTCGAAGAAAAGCATTTCGAATGGTTTATGGTGATTTTAAAAGTTCATTTAAGGCATTACCTCGATACATGGCTGCACTACAATTATTCAATCCAGGCACTATTATTGAGTGGGAGCATCATTCTACAACAATGCAAGGTGAGCAAATTTTTAAATTTCTTTTTTGGGCTTTTAAACAGAGCATTGATGGTTTCAAAAGTTGTAGGCCGGTCATTTCTATCGACGGCACACATCTTTATGGTTTGTATGATATCAAATTGTTAATTGCGGTTGGAATTGTTGCGAATGAAAAT</genome_strand>
        <mrna_strand>AGATGCAAATGAAATCTGCAGTAAGAGCATATAGTTCTTCTATTAAAAAAGAATTTCTTTGTGATCAATCCAAAAGTAAAAGTTGGAAATTTATTTGCAAGCGTCATGAGTTATGGTGTGATTGGATGATTCGGTTTAGAGAGATCTCAAGCGATATGTGGAAGACAGAAAAAATGATTGAACCGCATACTTGTCTTACAGATAATTATAAGGAGGATCATTTCAATTTGATTGATAACATGATTGCCACTTCATTAATACCATATGTTATGCAAAATTCGGACATAAATATTAAGATGATCCGTGAAATTATCAAAGGAAAGCATCACTATACTCCTAGTTATAGAAAATTACAAAAAGGTCGAAGAAAAGCATTTCGAATGGTTTATGGTGATTTTGAAAGTTCATTTAAAGCATTACCTCGATACATGGCTGCACTACAATTATTCAATCCAGGCACTATTATTGAGTGGGAGCATCATTCTACAACAATGCAAGATGAGCAAATTTTTAAATTTCTTTTTAGGGCTTTTAAACAGAGCATTGATGGTTTCAAAAGTTGTAGGCTGGTCATTTCTATCGACGGCACACATCTTTATGGTTTGTATAATATCAAATTGTTAATTGCGGTTGGAATTGACGCGGATGGAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E538686" ref_strand="+" ref_description="SGN-E538686 [TUS-58-A22]">
      <seq>cagtatcgtcgagctcggatgattgaaaatgatgaaaatcaatctaatgaaatgagacaatatgcagcggaagtcgctcgtatttcaatggagtcaatgaatgcagcctttcaaggaacgcgattgagctttgatcatgattacaatcctcccactcaatacgatgaaccaccaccagtacaagtatctcgccgatcacgacaaacaacaccgagagagggtgctcgtcgaggtagaaggaccactagtgaaacagctgatttttctgcagggccctctaacactaatgtggcgactcccgagccttattatcccacatttgatttttctgtagggccctctaacactaatccaaatttttctagtcagcaaacagttggttttgtaactccgcaggttccaatatctgggtttgcacaatttagtggttctcaatatggttttcaacatggtatgcgtgaatttccgatacataattctccatttggtggaagattgaatttttcgaatgtaactgcgtttgatgattcaagatttaatgttggggcttcacaaaatttagttcttaatagacaaaatccacctcggagaacatctaggctacacaaatcaactagatgtggaacaggcagtcactatcaaaatgaggaagattttgaaaatgaagatgaaaatgaagatgagaatgaagatgtaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="89430" stop="88054"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89130" g_stop="88621" g_length="510"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="511" r_length="511" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="88620" i_stop="88520" i_length="101">
            <donor d_prob="0.966" d_score="0.94"/>
            <acceptor a_prob="0.130" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88519" g_stop="88362" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="512" r_stop="669" r_length="158" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E538686" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>668</cumulative_length_of_scored_exons>
        <coverage percentage="0.957" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E538686" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89130" e_stop="88621"/>
          <exon e_start="88519" e_stop="88362"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGTATCGTCAAGCTCGGATGATTGAAAATGATGAAAATCAATCTAATGAAATGAGACAATATGCAGAGGAAGTCGCTCGTATTTCAATGGAGTCAATGAATGCGGCCTTTCAGGGAACGCGATTGAGCTTTGATCCTGATTGCAATCCTCCCACTCAATACGATGAACCACCACCAGTACAAGTATCTCGCCGATCACGACAAACAACACCGAGAGAGGGTGCTCGTCGAGGTAGAAGGACCGCTGGTGAAACAACTGATTTTTCTGCAGGGCCCTCTAACGCTAATGTGGCGACTCCCGAGCCTTATTATCCCACGTTTGATTTTTATGCAGGGCCCTCTAACACTAATTCGAATTTTTCTAGTCAGCAAACAGTTGGTTTTGTAACTCCGCAGGTTCCAATATCTGGGTTTGCGTAATTTAGTGGATCTCAATATGGTTTTCAACATGGTATGCGTGAATTTCCTATACATAATTCTCCATTTGGTGGAAGATTGAATTTTTCGAAT-GTAAGTATAATAATTTTCATACAATTTTTTTAACTTTTTATAATTTTTTTTATTTTTATTGCATGTTTATTTGATTATATTATGTTATATTGTATTATAAGTAACTGTATTTGATGATTCAAGATTTAATGCTGGGGCTTCACAAAATTTAGTTCTTAATAAACAAAATTCACCTCGGAGAACATCTAGGCTACACAAATCAACTAGATGTGGAACAGGCAGTCACTATCAAAATGAGGAAGATTTTGAAAATGAAGAT</genome_strand>
        <mrna_strand>CAGTATCGTCGAGCTCGGATGATTGAAAATGATGAAAATCAATCTAATGAAATGAGACAATATGCAGCGGAAGTCGCTCGTATTTCAATGGAGTCAATGAATGCAGCCTTTCAAGGAACGCGATTGAGCTTTGATCATGATTACAATCCTCCCACTCAATACGATGAACCACCACCAGTACAAGTATCTCGCCGATCACGACAAACAACACCGAGAGAGGGTGCTCGTCGAGGTAGAAGGACCACTAGTGAAACAGCTGATTTTTCTGCAGGGCCCTCTAACACTAATGTGGCGACTCCCGAGCCTTATTATCCCACATTTGATTTTTCTGTAGGGCCCTCTAACACTAATCCAAATTTTTCTAGTCAGCAAACAGTTGGTTTTGTAACTCCGCAGGTTCCAATATCTGGGTTTGCACAATTTAGTGGTTCTCAATATGGTTTTCAACATGGTATGCGTGAATTTCCGATACATAATTCTCCATTTGGTGGAAGATTGAATTTTTCGAATG.....................................................................................................TAACTGCGTTTGATGATTCAAGATTTAATGTTGGGGCTTCACAAAATTTAGTTCTTAATAGACAAAATCCACCTCGGAGAACATCTAGGCTACACAAATCAACTAGATGTGGAACAGGCAGTCACTATCAAAATGAGGAAGATTTTGAAAATGAAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E275102" ref_strand="+" ref_description="SGN-E275102 [cLEN-9-E16]">
      <seq>agtatcgtcgagctcggatgattgaaaatgatgaaaatcaatctaatgaaatgagacaatatgcagcggaagtcgctcgtatttcaatggagtcaatgaatgcagcctttcaaggaacgcgattgagctttgatcatgattacaatcctcccactcaatacgatgaaccaccaccagtacaagtatctcgccgatcacgacaaacaacaccgagagagggtgctcgtcgaggtagaaggaccactagtgaaacagctgatttttctgcagggccctctaacactaatgtggcgactcccgagccttattatcccacatttgatttttctgtagggccctctaacactaatccaaatttttctagtcagcaaacagttggttttgtaactccgcaggttccaatatctgggtttgcacaatttagtggttctcaatatggttntcaacatggtatgcgtgaatttccgatacataattctccatttggtggaagattgaatttttcgaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="89429" stop="88321"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89129" g_stop="88621" g_length="509"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="509" r_length="509" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E275102" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>509</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E275102" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89129" e_stop="88621"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTATCGTCAAGCTCGGATGATTGAAAATGATGAAAATCAATCTAATGAAATGAGACAATATGCAGAGGAAGTCGCTCGTATTTCAATGGAGTCAATGAATGCGGCCTTTCAGGGAACGCGATTGAGCTTTGATCCTGATTGCAATCCTCCCACTCAATACGATGAACCACCACCAGTACAAGTATCTCGCCGATCACGACAAACAACACCGAGAGAGGGTGCTCGTCGAGGTAGAAGGACCGCTGGTGAAACAACTGATTTTTCTGCAGGGCCCTCTAACGCTAATGTGGCGACTCCCGAGCCTTATTATCCCACGTTTGATTTTTATGCAGGGCCCTCTAACACTAATTCGAATTTTTCTAGTCAGCAAACAGTTGGTTTTGTAACTCCGCAGGTTCCAATATCTGGGTTTGCGTAATTTAGTGGATCTCAATATGGTTTTCAACATGGTATGCGTGAATTTCCTATACATAATTCTCCATTTGGTGGAAGATTGAATTTTTCGAAT</genome_strand>
        <mrna_strand>AGTATCGTCGAGCTCGGATGATTGAAAATGATGAAAATCAATCTAATGAAATGAGACAATATGCAGCGGAAGTCGCTCGTATTTCAATGGAGTCAATGAATGCAGCCTTTCAAGGAACGCGATTGAGCTTTGATCATGATTACAATCCTCCCACTCAATACGATGAACCACCACCAGTACAAGTATCTCGCCGATCACGACAAACAACACCGAGAGAGGGTGCTCGTCGAGGTAGAAGGACCACTAGTGAAACAGCTGATTTTTCTGCAGGGCCCTCTAACACTAATGTGGCGACTCCCGAGCCTTATTATCCCACATTTGATTTTTCTGTAGGGCCCTCTAACACTAATCCAAATTTTTCTAGTCAGCAAACAGTTGGTTTTGTAACTCCGCAGGTTCCAATATCTGGGTTTGCACAATTTAGTGGTTCTCAATATGGTTNTCAACATGGTATGCGTGAATTTCCGATACATAATTCTCCATTTGGTGGAAGATTGAATTTTTCGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E273853" ref_strand="+" ref_description="SGN-E273853 [cLEN-7-O9]">
      <seq>ttgatcgtgttgtgagacagttcgattatttacaacggagtcctggaccgtgtacccaattttccgaatatcattttaagcgtaataaacgatcaaaaataaaacaagaggatatagatgcatttaactgtgcacaagatttatgggaacaacgtcaaaatcgtatatttcgacctccatttgtaagtgatcaaacagattacttccgttggtacatgaggcatacccgcatggtcattggaaatccacaacatgttgtacaaaaagggtatcaacacatggcaggaagacatgaggcattagctaggggtcatgaaatgcagtatcgtggagctcggatgattgaaaatgatgaaaatcaatctgatggaatgagacaatatgcagcggaagtcgctcgtatttcaatggagggaatgaaggcaggctcttaaggaacgcgattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="89831" stop="88721"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89531" g_stop="89231" g_length="301"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="302" r_length="302" r_score="0.940"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89230" i_stop="89149" i_length="82">
            <donor d_prob="0.905" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89148" g_stop="89005" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="446" r_length="144" r_score="0.903"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E273853" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>445</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E273853" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89531" e_stop="89231"/>
          <exon e_start="89148" e_stop="89005"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGATCGTGTTGTGAGACAGTTCGGTTATTTACAACATATTCCTGAACCGTGTACCCAATTTTCTGAATATCATTTTAAGTGTGATAAACGATCCAAAATAAAACAAGAAGATATAGATGCATTTAACTATACACAATATTTATGGGAACAACGTCACAATCGTATATTTCGACCTCCATTTGTAAGTGATCAAACAGATTACTTTCGTTGGTACATGAGGCATACCCGCATGGTCATTGGAAATCCACAACATGTTGTAC-AAAAGAGTATCAACACATGGCAGGAAGACATGAGGCATTAGTATGTATATTATGTAAATTTTAAATTATTATGTCAATCTTTAATAATTTTTTTGTTATTAATATTTGTTTATTCATTATAGGTTAGGGGTCATGAAATGCAGTATCGTCAAGCTCGGATGATTGAAAATGATGAAAATCAATCTAATGAAATGAGACAATATGCAGAGGAAGTCGCTCGTATTTCAATGGAGTCAATGAATGCGGCCTTTCAGGGAACGCGATTG</genome_strand>
        <mrna_strand>TTGATCGTGTTGTGAGACAGTTCGATTATTTACAACGGAGTCCTGGACCGTGTACCCAATTTTCCGAATATCATTTTAAGCGTAATAAACGATCAAAAATAAAACAAGAGGATATAGATGCATTTAACTGTGCACAAGATTTATGGGAACAACGTCAAAATCGTATATTTCGACCTCCATTTGTAAGTGATCAAACAGATTACTTCCGTTGGTACATGAGGCATACCCGCATGGTCATTGGAAATCCACAACATGTTGTACAAAAAGGGTATCAACACATGGCAGGAAGACATGAGGCATTA..................................................................................GCTAGGGGTCATGAAATGCAGTATCGTGGAGCTCGGATGATTGAAAATGATGAAAATCAATCTGATGGAATGAGACAATATGCAGCGGAAGTCGCTCGTATTTCAATGGAGGGAATGAAGGCAGGCTCTTAAGGAACGCGATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E274114" ref_strand="+" ref_description="SGN-E274114 [cLEN-8-I9]">
      <seq>tttgatattattagtatcttatacttttcatattttattttattttaaataagaatatatttttttctgccaatgttgtttttataattatcttacttaattatttttttatagtttattcggcagccttattcggaagatgttattaatggattgcctgagtggtgtcggtcaggacaacgtgtctggatggcacaggtgccactgatttatggaatttatcgtgagtggcacatggttgatcgtgttgtgagacagttcgattatttacaacatattcctggaccgtgtacccaattttccgaatatcattttaagcgtaataaacgatcaaaaataaaacaagaagatatagatgcatttaactatacacaatatttatgggaacaacgtcaaaatcgtatatttcgacctccatttgtaagtgatcaaacagattacttccgttggtacatgaggcatacccgcatggtcattggaaatccacaacatgttgtacaaaaagggtatcaacacatggcaggaagacatgaggcattagctaggggtcatgaaatgcagtatcgtcgagctcggatgattgaaaatgatgaaaatcaatctaatgaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="90141" stop="88779"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89841" g_stop="89784" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="58" r_length="58" r_score="0.931"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89783" i_stop="89712" i_length="72">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89711" g_stop="89231" g_length="481"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="540" r_length="482" r_score="0.967"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89230" i_stop="89149" i_length="82">
            <donor d_prob="0.905" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89148" g_stop="89079" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="541" r_stop="610" r_length="70" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E274114" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>609</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E274114" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89841" e_stop="89784"/>
          <exon e_start="89711" e_stop="89231"/>
          <exon e_start="89148" e_stop="89079"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAATATTATTAGTATCTTAAACTATTCATAGTTTATTTTATTTTAAATAAGAATATATTTGGTAGATCTTTAAATGACACAATGGTACAAAAAAATTATTTTGTAAGATTGTTCATTTTCACGTAAATATTTTTTTCTGCCAATGTTGTTTTTATAATTATCTTACTTAATTATTTTTTAATAGTTTATTTGGCAGCCTTATTCGGAAGATGTTATTAATGGATTGCCTGAGTGGTGTCGGTCAGGACAACGTGTCTGCATGGCACAGGTGCCACTGATTTATGAAATTTATCGTGAGTGGCACATGATTGATCGTGTTGTGAGACAGTTCGGTTATTTACAACATATTCCTGAACCGTGTACCCAATTTTCTGAATATCATTTTAAGTGTGATAAACGATCCAAAATAAAACAAGAAGATATAGATGCATTTAACTATACACAATATTTATGGGAACAACGTCACAATCGTATATTTCGACCTCCATTTGTAAGTGATCAAACAGATTACTTTCGTTGGTACATGAGGCATACCCGCATGGTCATTGGAAATCCACAACATGTTGTAC-AAAAGAGTATCAACACATGGCAGGAAGACATGAGGCATTAGTATGTATATTATGTAAATTTTAAATTATTATGTCAATCTTTAATAATTTTTTTGTTATTAATATTTGTTTATTCATTATAGGTTAGGGGTCATGAAATGCAGTATCGTCAAGCTCGGATGATTGAAAATGATGAAAATCAATCTAATGAAA</genome_strand>
        <mrna_strand>TTTGATATTATTAGTATCTTATACTTTTCATATTTTATTTTATTTTAAATAAGAATAT........................................................................ATTTTTTTCTGCCAATGTTGTTTTTATAATTATCTTACTTAATTATTTTTTTATAGTTTATTCGGCAGCCTTATTCGGAAGATGTTATTAATGGATTGCCTGAGTGGTGTCGGTCAGGACAACGTGTCTGGATGGCACAGGTGCCACTGATTTATGGAATTTATCGTGAGTGGCACATGGTTGATCGTGTTGTGAGACAGTTCGATTATTTACAACATATTCCTGGACCGTGTACCCAATTTTCCGAATATCATTTTAAGCGTAATAAACGATCAAAAATAAAACAAGAAGATATAGATGCATTTAACTATACACAATATTTATGGGAACAACGTCAAAATCGTATATTTCGACCTCCATTTGTAAGTGATCAAACAGATTACTTCCGTTGGTACATGAGGCATACCCGCATGGTCATTGGAAATCCACAACATGTTGTACAAAAAGGGTATCAACACATGGCAGGAAGACATGAGGCATTA..................................................................................GCTAGGGGTCATGAAATGCAGTATCGTCGAGCTCGGATGATTGAAAATGATGAAAATCAATCTAATGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E275375" ref_strand="+" ref_description="SGN-E275375 [cLEN-10-E10]">
      <seq>gacgtagaaatcatcaaaatgaggcacgaactgtaatcggtgtgattagggatgtacttgataatctaactgatgaacaagtatttgatattattagtatcttatacttttcatattttattttattttaaataagaatatatttttttctgccaatgttgtttttataattatcttacttaattatttttttatagtttattcggcagccttattcggaagatgttattaatggattgcctgagtggtgtcggtcaggacaacgtgtctggatggcacaggtgccactgatttatggaatttatcgtgagtggcacatggttgatcgtgttgtgagacagttcgattatttacaacatattcctggaccgtgtacccaattttccgaatatcattttaagcgtaataaacgatcaaaaataaaacaagaagatatagatgcatttaactatacacaatatttatgggaacaacgtcaaaatcgtatatttcgacctccatttgtaagtgatcaaacagattacttccgttggtacatgaggcatacccgcatggtcattggaaatccacaacatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="90223" stop="88976"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89923" g_stop="89786" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="139" r_length="139" r_score="0.928"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89785" i_stop="89714" i_length="72">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89713" g_stop="89276" g_length="438"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="577" r_length="438" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E275375" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>576</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E275375" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89923" e_stop="89786"/>
          <exon e_start="89713" e_stop="89276"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGTAGAAATCATCGAAATGAGGCATGAACTGTAATC-GTGTGATTAGGGATGTACTAGATAATCTAACTGATGAACAAGTATTTAATATTATTAGTATCTTAAACTATTCATAGTTTATTTTATTTTAAATAAGAATATATTTGGTAGATCTTTAAATGACACAATGGTACAAAAAAATTATTTTGTAAGATTGTTCATTTTCACGTAAATATTTTTTTCTGCCAATGTTGTTTTTATAATTATCTTACTTAATTATTTTTTAATAGTTTATTTGGCAGCCTTATTCGGAAGATGTTATTAATGGATTGCCTGAGTGGTGTCGGTCAGGACAACGTGTCTGCATGGCACAGGTGCCACTGATTTATGAAATTTATCGTGAGTGGCACATGATTGATCGTGTTGTGAGACAGTTCGGTTATTTACAACATATTCCTGAACCGTGTACCCAATTTTCTGAATATCATTTTAAGTGTGATAAACGATCCAAAATAAAACAAGAAGATATAGATGCATTTAACTATACACAATATTTATGGGAACAACGTCACAATCGTATATTTCGACCTCCATTTGTAAGTGATCAAACAGATTACTTTCGTTGGTACATGAGGCATACCCGCATGGTCATTGGAAATCCACAACATGT</genome_strand>
        <mrna_strand>GACGTAGAAATCATCAAAATGAGGCACGAACTGTAATCGGTGTGATTAGGGATGTACTTGATAATCTAACTGATGAACAAGTATTTGATATTATTAGTATCTTATACTTTTCATATTTTATTTTATTTTAAATAAGAAT........................................................................ATATTTTTTTCTGCCAATGTTGTTTTTATAATTATCTTACTTAATTATTTTTTTATAGTTTATTCGGCAGCCTTATTCGGAAGATGTTATTAATGGATTGCCTGAGTGGTGTCGGTCAGGACAACGTGTCTGGATGGCACAGGTGCCACTGATTTATGGAATTTATCGTGAGTGGCACATGGTTGATCGTGTTGTGAGACAGTTCGATTATTTACAACATATTCCTGGACCGTGTACCCAATTTTCCGAATATCATTTTAAGCGTAATAAACGATCAAAAATAAAACAAGAAGATATAGATGCATTTAACTATACACAATATTTATGGGAACAACGTCAAAATCGTATATTTCGACCTCCATTTGTAAGTGATCAAACAGATTACTTCCGTTGGTACATGAGGCATACCCGCATGGTCATTGGAAATCCACAACATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E276989" ref_strand="+" ref_description="SGN-E276989 [cLEN-22-B14]">
      <seq>attattcccctgcaaccattgccaaagcctctaagaaccaatcaatttgaggctttaactgcacttgcacgtaaatggacgcgacgtagaaatcatcaaaatgaggcacgaactgtaatcggtgtgattagggatgtacttgataatctaactgatgaacaagtatttgatattattagtatcttatacttttcatattttattttattttaaataagaatatatttttttctgccaatgttgtttttataattatcttacttaattatttttttatagtttattcggcagccttattcggaagatgttattaatggattgcctgagtggtgtcggtcaggacaacgtgtctggatggcacaggtgccactgatttatggaatttatcgtgagtggcacatggttgatcgtgttgtgagacagttcgattatttacaacatattcctggaccgtgtacccaattttccgaatatcattttaagcgtaataaacgatcaaaaataaaacaagaagatatagatgcatttaactatacacaatatttatgggaacaacgtcaaaatcgtatatttcgacctccatttgtaagtgatcaaacagattacttccgttggtacatgaggcatacccgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="90305" stop="89001"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90005" g_stop="89786" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="221" r_length="221" r_score="0.936"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89785" i_stop="89714" i_length="72">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89713" g_stop="89301" g_length="413"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="634" r_length="413" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E276989" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>633</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E276989" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90005" e_stop="89786"/>
          <exon e_start="89713" e_stop="89301"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTATTCCCCTGCAACCATTGCCAAAGCCTCTAAGAACCAATCAACTTGAGGCTTCACCTGCGCTTGCACGTAAATGGACGCGAGGTAGAAATCATCGAAATGAGGCATGAACTGTAATCG-TGTGATTAGGGATGTACTAGATAATCTAACTGATGAACAAGTATTTAATATTATTAGTATCTTAAACTATTCATAGTTTATTTTATTTTAAATAAGAATATATTTGGTAGATCTTTAAATGACACAATGGTACAAAAAAATTATTTTGTAAGATTGTTCATTTTCACGTAAATATTTTTTTCTGCCAATGTTGTTTTTATAATTATCTTACTTAATTATTTTTTAATAGTTTATTTGGCAGCCTTATTCGGAAGATGTTATTAATGGATTGCCTGAGTGGTGTCGGTCAGGACAACGTGTCTGCATGGCACAGGTGCCACTGATTTATGAAATTTATCGTGAGTGGCACATGATTGATCGTGTTGTGAGACAGTTCGGTTATTTACAACATATTCCTGAACCGTGTACCCAATTTTCTGAATATCATTTTAAGTGTGATAAACGATCCAAAATAAAACAAGAAGATATAGATGCATTTAACTATACACAATATTTATGGGAACAACGTCACAATCGTATATTTCGACCTCCATTTGTAAGTGATCAAACAGATTACTTTCGTTGGTACATGAGGCATACCCGCA</genome_strand>
        <mrna_strand>ATTATTCCCCTGCAACCATTGCCAAAGCCTCTAAGAACCAATCAATTTGAGGCTTTAACTGCACTTGCACGTAAATGGACGCGACGTAGAAATCATCAAAATGAGGCACGAACTGTAATCGGTGTGATTAGGGATGTACTTGATAATCTAACTGATGAACAAGTATTTGATATTATTAGTATCTTATACTTTTCATATTTTATTTTATTTTAAATAAGAAT........................................................................ATATTTTTTTCTGCCAATGTTGTTTTTATAATTATCTTACTTAATTATTTTTTTATAGTTTATTCGGCAGCCTTATTCGGAAGATGTTATTAATGGATTGCCTGAGTGGTGTCGGTCAGGACAACGTGTCTGGATGGCACAGGTGCCACTGATTTATGGAATTTATCGTGAGTGGCACATGGTTGATCGTGTTGTGAGACAGTTCGATTATTTACAACATATTCCTGGACCGTGTACCCAATTTTCCGAATATCATTTTAAGCGTAATAAACGATCAAAAATAAAACAAGAAGATATAGATGCATTTAACTATACACAATATTTATGGGAACAACGTCAAAATCGTATATTTCGACCTCCATTTGTAAGTGATCAAACAGATTACTTCCGTTGGTACATGAGGCATACCCGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E276969" ref_strand="+" ref_description="SGN-E276969 [cLEN-22-H23]">
      <seq>cgtgcgtcaatgaaaaaatcaaatgaagtttgtggatttctctctttagtgtagatttgggcatgggaaagaattattcccctgcaaccattgccaaagcctctaagaaccaatcaatttgaggctttaactgcacttgcacgtaaatggacgcgacgtagaaatcatcaaaatgaggcacgaactgtaatcggtgtgattagggatgtacttgataatctaactgatgaacaagtatttgatattattagtatcttatacttttcatattttattttattttaaataagaatatatttttttctgccaatgttgtttttataattatcttacttaattatttttttatagtttattcggcagccttattcggaagatgttattaatggattgcctgagtggtgtcggtcaggacaacgtgtctggatggcacaggtgccactgatttatggaatttatcgtgagtggcacatggttgatcgtgttgtgagacagttcgattatttacaacatattcctggaccgtgtacccaattttccgaatatcattttaagcgtaataaacgatcaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="90474" stop="89133"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90174" g_stop="90121" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="54" r_length="54" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90120" i_stop="90024" i_length="97">
            <donor d_prob="0.979" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90023" g_stop="89786" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="293" r_length="239" r_score="0.941"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89785" i_stop="89714" i_length="72">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89713" g_stop="89433" g_length="281"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="574" r_length="281" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E276969" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>573</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E276969" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90174" e_stop="90121"/>
          <exon e_start="90023" e_stop="89786"/>
          <exon e_start="89713" e_stop="89433"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTGCGTCAATGAAAAAATCAAATGAAGTTTGTGGATTTCTCTCTTTAGTGCAGGTATACATATTTTTTAATTAAATATTTTTTATATACTAGTAATATGCACTTTTAAATTTAAGTGCATTATAAGTAATGGTGAATTTATTTATTGTAGATTTGGGCATGGGAAAGAATTATTCCCCTGCAACCATTGCCAAAGCCTCTAAGAACCAATCAACTTGAGGCTTCACCTGCGCTTGCACGTAAATGGACGCGAGGTAGAAATCATCGAAATGAGGCATGAACTGTAATC-GTGTGATTAGGGATGTACTAGATAATCTAACTGATGAACAAGTATTTAATATTATTAGTATCTTAAACTATTCATAGTTTATTTTATTTTAAATAAGAATATATTTGGTAGATCTTTAAATGACACAATGGTACAAAAAAATTATTTTGTAAGATTGTTCATTTTCACGTAAATATTTTTTTCTGCCAATGTTGTTTTTATAATTATCTTACTTAATTATTTTTTAATAGTTTATTTGGCAGCCTTATTCGGAAGATGTTATTAATGGATTGCCTGAGTGGTGTCGGTCAGGACAACGTGTCTGCATGGCACAGGTGCCACTGATTTATGAAATTTATCGTGAGTGGCACATGATTGATCGTGTTGTGAGACAGTTCGGTTATTTACAACATATTCCTGAACCGTGTACCCAATTTTCTGAATATCATTTTAAGTGTGATAAACGATCCAAAA</genome_strand>
        <mrna_strand>CGTGCGTCAATGAAAAAATCAAATGAAGTTTGTGGATTTCTCTCTTTAGTGTAG.................................................................................................ATTTGGGCATGGGAAAGAATTATTCCCCTGCAACCATTGCCAAAGCCTCTAAGAACCAATCAATTTGAGGCTTTAACTGCACTTGCACGTAAATGGACGCGACGTAGAAATCATCAAAATGAGGCACGAACTGTAATCGGTGTGATTAGGGATGTACTTGATAATCTAACTGATGAACAAGTATTTGATATTATTAGTATCTTATACTTTTCATATTTTATTTTATTTTAAATAAGAAT........................................................................ATATTTTTTTCTGCCAATGTTGTTTTTATAATTATCTTACTTAATTATTTTTTTATAGTTTATTCGGCAGCCTTATTCGGAAGATGTTATTAATGGATTGCCTGAGTGGTGTCGGTCAGGACAACGTGTCTGGATGGCACAGGTGCCACTGATTTATGGAATTTATCGTGAGTGGCACATGGTTGATCGTGTTGTGAGACAGTTCGATTATTTACAACATATTCCTGGACCGTGTACCCAATTTTCCGAATATCATTTTAAGCGTAATAAACGATCAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E393845" ref_strand="+" ref_description="SGN-E393845 [TUS-41-D13]">
      <seq>aattattcccctgcaaccattgccaaagcctctaagaaccaatcaatttgaggctttaactgcacttgcacgtaaatggacgcgacgtagaaatcatcaaaatgaggcacgaactgtaatcggtgtgattagggatgtacttgataatctaactgatgaacaagtatttgatattattagtatcttatacttttcatattttattttattttaaataagaatatatttttttctgccaatgttgtttttataattatcttacttaattatttttttatagtttattcggcagcttttttttgaagatgttattaatggattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="90306" stop="89314"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90006" g_stop="89786" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="222" r_length="222" r_score="0.937"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89785" i_stop="89714" i_length="72">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89713" g_stop="89614" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="322" r_length="100" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E393845" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>321</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E393845" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90006" e_stop="89786"/>
          <exon e_start="89713" e_stop="89614"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTATTCCCCTGCAACCATTGCCAAAGCCTCTAAGAACCAATCAACTTGAGGCTTCACCTGCGCTTGCACGTAAATGGACGCGAGGTAGAAATCATCGAAATGAGGCATGAACTGTAATC-GTGTGATTAGGGATGTACTAGATAATCTAACTGATGAACAAGTATTTAATATTATTAGTATCTTAAACTATTCATAGTTTATTTTATTTTAAATAAGAATATATTTGGTAGATCTTTAAATGACACAATGGTACAAAAAAATTATTTTGTAAGATTGTTCATTTTCACGTAAATATTTTTTTCTGCCAATGTTGTTTTTATAATTATCTTACTTAATTATTTTTTAATAGTTTATTTGGCAGCCTTATTCGGAAGATGTTATTAATGGATTG</genome_strand>
        <mrna_strand>AATTATTCCCCTGCAACCATTGCCAAAGCCTCTAAGAACCAATCAATTTGAGGCTTTAACTGCACTTGCACGTAAATGGACGCGACGTAGAAATCATCAAAATGAGGCACGAACTGTAATCGGTGTGATTAGGGATGTACTTGATAATCTAACTGATGAACAAGTATTTGATATTATTAGTATCTTATACTTTTCATATTTTATTTTATTTTAAATAAGAAT........................................................................ATATTTTTTTCTGCCAATGTTGTTTTTATAATTATCTTACTTAATTATTTTTTTATAGTTTATTCGGCAGCTTTTTTTTGAAGATGTTATTAATGGATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E276288" ref_strand="+" ref_description="SGN-E276288 [cLEN-21-K4]">
      <seq>ttggaagttattaacgataactcaactgagcatgaagttcaacaaagatttagattatatttattatggttatgtggtggatcaatatttccggataaatctaataataagattaatttggacattttgattgacatgagaaatttagatttaatgtcaactcaagcatggggatcggccgcattatcatatttgtataattgtttatgtcgtgcgtcaatgaaaaaatcaaatgaagtttgtggatttctctctttagtgtaggtatacatattttttgattaaatattttttatatactagtaatatgcacttttaaatttaagtgcattataagtaatggtgaatttatttattgtagatttgggcatgggaaagaattattcccctgcaaccattgccaaagcctctaagaaccaatcaatttgaggctttaactgcacttgcacgtaaatggacgcgacgtagaaatcatcaaaatgaggcacgaactgtaatcggtgtgattagggatgtacttgataatctaactgatgaacaagtatttgatattattagtatcttatacttttcatattttattttattttaaataagaatatatttgtttctgccaatgttgtttttataattatcttacttaattattttttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="90684" stop="89359"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90384" g_stop="89779" g_length="606"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="607" r_length="607" r_score="0.965"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89778" i_stop="89707" i_length="72">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89706" g_stop="89659" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="608" r_stop="655" r_length="48" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E276288" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>654</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E276288" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90384" e_stop="89779"/>
          <exon e_start="89706" e_stop="89659"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGAAGTTATTAATGATAACTCAACTGAGCATGAAGTTCAACAAAGATTTAGATTATATTTATTATGGTTATGTGGTGGATCAATATTTCCGGATAAATCTAATAATAAGATTAATTTGGACATTTTGATTGACATGAGAAATTTAGATTTAATGTCAACTCAAGCATGGGAATCGGACACATTATCATATTTGTATAATTGTTTATGCCGTGCGTCAATGAAAAAATCAAATGAAGTTTGTGGATTTCTCTCTTTAGTGCAGGTATACATATTTTTTAATTAAATATTTTTTATATACTAGTAATATGCACTTTTAAATTTAAGTGCATTATAAGTAATGGTGAATTTATTTATTGTAGATTTGGGCATGGGAAAGAATTATTCCCCTGCAACCATTGCCAAAGCCTCTAAGAACCAATCAACTTGAGGCTTCACCTGCGCTTGCACGTAAATGGACGCGAGGTAGAAATCATCGAAATGAGGCATGAACTGTAATC-GTGTGATTAGGGATGTACTAGATAATCTAACTGATGAACAAGTATTTAATATTATTAGTATCTTAAACTATTCATAGTTTATTTTATTTTAAATAAGAATATATTTGGTAGATCTTTAAATGACACAATGGTACAAAAAAATTATTTTGTAAGATTGTTCATTTTCACGTAAATATTTTTTTCTGCCAATGTTGTTTTTATAATTATCTTACTTAATTATTTTTTAA</genome_strand>
        <mrna_strand>TTGGAAGTTATTAACGATAACTCAACTGAGCATGAAGTTCAACAAAGATTTAGATTATATTTATTATGGTTATGTGGTGGATCAATATTTCCGGATAAATCTAATAATAAGATTAATTTGGACATTTTGATTGACATGAGAAATTTAGATTTAATGTCAACTCAAGCATGGGGATCGGCCGCATTATCATATTTGTATAATTGTTTATGTCGTGCGTCAATGAAAAAATCAAATGAAGTTTGTGGATTTCTCTCTTTAGTGTAGGTATACATATTTTTTGATTAAATATTTTTTATATACTAGTAATATGCACTTTTAAATTTAAGTGCATTATAAGTAATGGTGAATTTATTTATTGTAGATTTGGGCATGGGAAAGAATTATTCCCCTGCAACCATTGCCAAAGCCTCTAAGAACCAATCAATTTGAGGCTTTAACTGCACTTGCACGTAAATGGACGCGACGTAGAAATCATCAAAATGAGGCACGAACTGTAATCGGTGTGATTAGGGATGTACTTGATAATCTAACTGATGAACAAGTATTTGATATTATTAGTATCTTATACTTTTCATATTTTATTTTATTTTAAATAAGAATATATTTG........................................................................TTTCTGCCAATGTTGTTTTTATAATTATCTTACTTAATTATTTTTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E276340" ref_strand="+" ref_description="SGN-E276340 [cLEN-21-J12]">
      <seq>agttattaactataactcaactgagtttgaagttcaacaaagatttagattatatggattatggttatgcggtggatcaatatttccggataaatctaataataagattaatttggacattttgattgacatgagaaatttagatttaatgtcaactcaagcatggggatcggccgcattatcatatttgtataattgtttatgtcgtgcgtcaatgaaaaaatcaaatgaagtttgtggatttctctctttagtgtaggtatacatattttttgattaaatattttttatatactagtaatatgcacttttaaatttaagtgcattataagtaatggtgaatttatttattgtagatttgggcatgggaaagaattattcccctgcaaccattgccaaagcctctaagaaccaatcaatttgaggctttaactgcacttgcacgtaaatggacgcgacgtagaaatcatcaaaatgaggcacgaactgtaatcggtgtgattagggatgtacttgataatctaactgatgaacaagtatttgatattattagtatcttatacttttcatattttattttattttaaataagaatatatttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="90679" stop="89480"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90379" g_stop="89777" g_length="603"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="604" r_length="604" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E276340" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>603</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E276340" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90379" e_stop="89777"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTATTAATGATAACTCAACTGAGCATGAAGTTCAACAAAGATTTAGATTATATTTATTATGGTTATGTGGTGGATCAATATTTCCGGATAAATCTAATAATAAGATTAATTTGGACATTTTGATTGACATGAGAAATTTAGATTTAATGTCAACTCAAGCATGGGAATCGGACACATTATCATATTTGTATAATTGTTTATGCCGTGCGTCAATGAAAAAATCAAATGAAGTTTGTGGATTTCTCTCTTTAGTGCAGGTATACATATTTTTTAATTAAATATTTTTTATATACTAGTAATATGCACTTTTAAATTTAAGTGCATTATAAGTAATGGTGAATTTATTTATTGTAGATTTGGGCATGGGAAAGAATTATTCCCCTGCAACCATTGCCAAAGCCTCTAAGAACCAATCAACTTGAGGCTTCACCTGCGCTTGCACGTAAATGGACGCGAGGTAGAAATCATCGAAATGAGGCATGAACTGTAATC-GTGTGATTAGGGATGTACTAGATAATCTAACTGATGAACAAGTATTTAATATTATTAGTATCTTAAACTATTCATAGTTTATTTTATTTTAAATAAGAATATATTTGGT</genome_strand>
        <mrna_strand>AGTTATTAACTATAACTCAACTGAGTTTGAAGTTCAACAAAGATTTAGATTATATGGATTATGGTTATGCGGTGGATCAATATTTCCGGATAAATCTAATAATAAGATTAATTTGGACATTTTGATTGACATGAGAAATTTAGATTTAATGTCAACTCAAGCATGGGGATCGGCCGCATTATCATATTTGTATAATTGTTTATGTCGTGCGTCAATGAAAAAATCAAATGAAGTTTGTGGATTTCTCTCTTTAGTGTAGGTATACATATTTTTTGATTAAATATTTTTTATATACTAGTAATATGCACTTTTAAATTTAAGTGCATTATAAGTAATGGTGAATTTATTTATTGTAGATTTGGGCATGGGAAAGAATTATTCCCCTGCAACCATTGCCAAAGCCTCTAAGAACCAATCAATTTGAGGCTTTAACTGCACTTGCACGTAAATGGACGCGACGTAGAAATCATCAAAATGAGGCACGAACTGTAATCGGTGTGATTAGGGATGTACTTGATAATCTAACTGATGAACAAGTATTTGATATTATTAGTATCTTATACTTTTCATATTTTATTTTATTTTAAATAAGAATATATTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E276550" ref_strand="+" ref_description="SGN-E276550 [cLEN-17-K14]">
      <seq>ttaacgataactcaactgagcatgaagttcaacaaagatttagattatatttattatggttatgtggtggatcaatatttccggataaatctaataataagattaatttggacattttgattgacatgagaaatttagatttaatgtcaactcaagcatggggatcggccgcattatcatatttgtataattgtttatgtcgtgcgtcaatgaaaaaatcaaatgaagtttgtggatttctctctttagtgtagatttgggcatgggaaagaattattcccctgcaacca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="90674" stop="89688"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90374" g_stop="90121" g_length="254"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="254" r_length="254" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90120" i_stop="90024" i_length="97">
            <donor d_prob="0.979" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90023" g_stop="89988" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="290" r_length="36" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E276550" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>290</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E276550" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90374" e_stop="90121"/>
          <exon e_start="90023" e_stop="89988"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAATGATAACTCAACTGAGCATGAAGTTCAACAAAGATTTAGATTATATTTATTATGGTTATGTGGTGGATCAATATTTCCGGATAAATCTAATAATAAGATTAATTTGGACATTTTGATTGACATGAGAAATTTAGATTTAATGTCAACTCAAGCATGGGAATCGGACACATTATCATATTTGTATAATTGTTTATGCCGTGCGTCAATGAAAAAATCAAATGAAGTTTGTGGATTTCTCTCTTTAGTGCAGGTATACATATTTTTTAATTAAATATTTTTTATATACTAGTAATATGCACTTTTAAATTTAAGTGCATTATAAGTAATGGTGAATTTATTTATTGTAGATTTGGGCATGGGAAAGAATTATTCCCCTGCAACCA</genome_strand>
        <mrna_strand>TTAACGATAACTCAACTGAGCATGAAGTTCAACAAAGATTTAGATTATATTTATTATGGTTATGTGGTGGATCAATATTTCCGGATAAATCTAATAATAAGATTAATTTGGACATTTTGATTGACATGAGAAATTTAGATTTAATGTCAACTCAAGCATGGGGATCGGCCGCATTATCATATTTGTATAATTGTTTATGTCGTGCGTCAATGAAAAAATCAAATGAAGTTTGTGGATTTCTCTCTTTAGTGTAG.................................................................................................ATTTGGGCATGGGAAAGAATTATTCCCCTGCAACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E273357" ref_strand="+" ref_description="SGN-E273357 [cLEN-3-L15]">
      <seq>aatttttgttattcttcaaattttctaaagtttttaaaagcattttctttataagatatggatccatcaaatttatacgtacatcctggtccagtagagcatgatgtattaaaaattcaagttcatcatcgttccgaaggaatttggaatggtagcataaaagaagagaaatgttgcttatatacgcgtcgtggtgatattgaattttggcaacatttaaaatatcatccattacattctcgcatccttcaatattttgaaaattgtagatttaaaggaattcttgatgttggatgtgtgccgtatgactccggattaatttctgctttaattgaaaggtggcgtccggaaactcatacttttcacatgcgaactgacgaggctaccataactttacaagatattgaaattttattcggaatggtagtagatggtagtcctataattttaaatggagctgattctttaaggattataggtagacaagaaatgatttttcaattaacaggatggttacccgatactagttgtttttctggtgttagtagattgtcaacatataaattgattgagtatatcgaaggtttggaagttattaacgataactcaactgagcatgaagttcaacaaagatttagattatatttattat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="91397" stop="90018"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91097" g_stop="91043" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91042" i_stop="90914" i_length="129">
            <donor d_prob="0.939" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90913" g_stop="90318" g_length="596"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="652" r_length="597" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E273357" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>651</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E273357" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91097" e_stop="91043"/>
          <exon e_start="90913" e_stop="90318"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTCTTGTTATTCTTCAAATTTTCTAAAGTTTTTAAAAGCATTTTCTTTATAAGGTGAGTTTAAATTTATTTTATTTTTAATTTATTTTAATTAATTTTATACTTTTATATGATATTGTTGATATATTCAATCGTTTGATACTTATATTAATGTTAATATTTCTTTTTATTTTTTGTGTATAGATATGCATCTGTCAAATTTATACCTACATCCTGATCCAGTAGAGCATGATGTATTAAAAATTCAAGTTCATCATCGTTCTGAAGGAATTTGGAATGGTAGCATAAAAGAAAAGAGGACTTGCTTATATACGCGTCGTGGTGATATTGAATTTTGGCAACATTTAAAATATCATCCATTACATTCTCGCATCCTTCAATATTTTGAAAATTGTAGATTTAAAGTAATTCTTGATGTTGGATGTGTGTCGTATGACTCCGGATTAATTTCTGCTTTAATTGAAA-GTGGCGTCCGGAAACTCATACTTCTCACATGCGAACTGGCGAGGCTACCATAACTTTACAAGATATTGAAATTTTATTCGGAATGGTAGTAGATGGTAGTCCTATAATTTTAAATGGAGCTGATTCTTTAGGGATTATAGGTAGACAAGAAATGATTTTTCAATTAACAGGATGGTTACCCGATACTAGTTGTTTTTCTGGTGTTATTAGATTGTTAACATATAAATTGATTGAGTATATCGAAGGTTTGGAAGTTATTAATGATAACTCAACTGAGCATGAAGTTCAACAAAGATTTAGATTATATTTATTAT</genome_strand>
        <mrna_strand>AATTTTTGTTATTCTTCAAATTTTCTAAAGTTTTTAAAAGCATTTTCTTTATAAG.................................................................................................................................ATATGGATCCATCAAATTTATACGTACATCCTGGTCCAGTAGAGCATGATGTATTAAAAATTCAAGTTCATCATCGTTCCGAAGGAATTTGGAATGGTAGCATAAAAGAAGAGAAATGTTGCTTATATACGCGTCGTGGTGATATTGAATTTTGGCAACATTTAAAATATCATCCATTACATTCTCGCATCCTTCAATATTTTGAAAATTGTAGATTTAAAGGAATTCTTGATGTTGGATGTGTGCCGTATGACTCCGGATTAATTTCTGCTTTAATTGAAAGGTGGCGTCCGGAAACTCATACTTTTCACATGCGAACTGACGAGGCTACCATAACTTTACAAGATATTGAAATTTTATTCGGAATGGTAGTAGATGGTAGTCCTATAATTTTAAATGGAGCTGATTCTTTAAGGATTATAGGTAGACAAGAAATGATTTTTCAATTAACAGGATGGTTACCCGATACTAGTTGTTTTTCTGGTGTTAGTAGATTGTCAACATATAAATTGATTGAGTATATCGAAGGTTTGGAAGTTATTAACGATAACTCAACTGAGCATGAAGTTCAACAAAGATTTAGATTATATTTATTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E447237" ref_strand="+" ref_description="SGN-E447237 [cSTA-25-K24]">
      <seq>gttcaaggtgaattaaatacttcgaacccaagtggtcctcttacacatcgaacctataataaggatcgtgatcgtgaaaattttgctaaaatggttgttgtttgtggtttaccttttagttttggagaacatccgggttttattgcatatattcgtgatacatataatcctagttttaaaggtttatcaagaagcatggtaaaaagagatatttttgaatttcaagaaaaacattgtcaatatttgcgtgcctattttgaaataatggattgtagagttgctattaccactgatatgggtcgtagtcctaatggttttgattatttaactgttactgcgcattggactgattataattggaatttacaaaaaagaattattggttataaaatttgtcaaaagaaaaaaactggaatgtatattgctactactgtgttggaaattttagattttttcggtctttgtgataaagtcattagtattactttagataatgcttctgctaatttaaatgctattaatatgctagaaactagactttgtcctattagtaaatatgcttttcatgttagatgtgctgcgcatatattaaatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="+" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="95824" stop="97017"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96124" g_stop="96717" g_length="594"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="597" r_length="597" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="+" ref_id="SGN-E447237" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>594</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E447237" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96124" e_stop="96717"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCAAAGTGAATTAAATTCTTCGAACCCAAGTGGTCCTCTTACACATCAAACCTATAACAAGGATCGTGATCGTGAAAACTTTGCTAAAATGGTTGTTGTTTGTGGTTCACCTTTTAATTTTGGAGAACATCCAAATTTTATTGCATATATTCGTGAAACATATAATCCTAGTTATAAAGGTTTATCAAGAAGCATGGTAAAAAGATATATTTTTGAATTTCAAGAAAAACATTGTCAATATTTACGTGCCTATTTTGAACTAATGGATTATAGAGTTGCTATTACTACTGATATGGGTCGTAGTCCTAATGGTTTTGATTATTTAACTGTTACTGCGCATTGGATCGATTAATAATTGGAATTTACAAAAAAGAATTA-TGGTTATAAAATTTGTC--AA-AAAAAACCCGGAATTTATATTGCTACTACTGTGTTGGAAATTTTAGATTTTTTCGTTCTTTGTGATAAAGTCGTTAGTATTACTTTAGATAATGCTTCTGCTAATTTAAATGCTATTAATATGCTAGAACCTAGACTTTGTCCTATTAGTAAATATGTTTTTCATGTTAGATGTTCCGCGCATATATTAAATTTG</genome_strand>
        <mrna_strand>GTTCAAGGTGAATTAAATACTTCGAACCCAAGTGGTCCTCTTACACATCGAACCTATAATAAGGATCGTGATCGTGAAAATTTTGCTAAAATGGTTGTTGTTTGTGGTTTACCTTTTAGTTTTGGAGAACATCCGGGTTTTATTGCATATATTCGTGATACATATAATCCTAGTTTTAAAGGTTTATCAAGAAGCATGGTAAAAAGAGATATTTTTGAATTTCAAGAAAAACATTGTCAATATTTGCGTGCCTATTTTGAAATAATGGATTGTAGAGTTGCTATTACCACTGATATGGGTCGTAGTCCTAATGGTTTTGATTATTTAACTGTTACTGCGCATTGGACTGATT-ATAATTGGAATTTACAAAAAAGAATTATTGGTTATAAAATTTGTCAAAAGAAAAAAACTGGAATGTATATTGCTACTACTGTGTTGGAAATTTTAGATTTTTTCGGTCTTTGTGATAAAGTCATTAGTATTACTTTAGATAATGCTTCTGCTAATTTAAATGCTATTAATATGCTAGAAACTAGACTTTGTCCTATTAGTAAATATGCTTTTCATGTTAGATGTGCTGCGCATATATTAAATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E447233" ref_strand="+" ref_description="SGN-E447233 [cSTA-25-K12]">
      <seq>ttttattgcatatattcgtgatacatataatcctagttttaaaggtttatcaagaagcatggtcaaaagagatatttttgaatttcaagaaaaacattgtcaatatttgcgtgcctattttgaaataatggattgtagagttgctattaccactgatatgggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="+" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="95961" stop="96723"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96261" g_stop="96423" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="163" r_length="163" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="+" ref_id="SGN-E447233" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>163</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E447233" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96261" e_stop="96423"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTATTGCATATATTCGTGAAACATATAATCCTAGTTATAAAGGTTTATCAAGAAGCATGGTAAAAAGATATATTTTTGAATTTCAAGAAAAACATTGTCAATATTTACGTGCCTATTTTGAACTAATGGATTATAGAGTTGCTATTACTACTGATATGGGT</genome_strand>
        <mrna_strand>TTTTATTGCATATATTCGTGATACATATAATCCTAGTTTTAAAGGTTTATCAAGAAGCATGGTCAAAAGAGATATTTTTGAATTTCAAGAAAAACATTGTCAATATTTGCGTGCCTATTTTGAAATAATGGATTGTAGAGTTGCTATTACCACTGATATGGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E342749" ref_strand="+" ref_description="SGN-E342749 [cTOF-7-A20]">
      <seq>aaacttggtcttgactcttctaataaatgtgaatttgttaaatatcttgaacagggtacagatgatattacaaacgataatggtataccggaactattgaactggtggagaaatcgtggagctcaatatccaaaacttagtaggatggtgaaggatgtgcttgcaattcaaggatcatcagtagcttcggaggcagctttcagcgcggcaagatttcaaattggagaccacagatattcgttagcagaagacagcctggagatatcagtgttatttagagattggataaatgctgagcgtagaaatcaaggacttccaaagttagatagtcaatttgaacttttcatagattcaactattggatgtggtagtgacgatggcatcgaaattcaagatcgtcaacgagctttaccaagaccagaagttgatcacaatcaatccctagctgagttagaaagaggatttacgggactatacaactattagtattacattcgagacatagttgaaacagaacccttcctagaaggtggctgcgtaagctatgtactctactaatagttgtaaattgaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="+" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="97147" stop="98321"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97447" g_stop="98021" g_length="575"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="575" r_length="575" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="+" ref_id="SGN-E342749" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>575</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E342749" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97447" e_stop="98021"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACTTGGTCGTGACTCTTCTAATAAATGTGAATTTGTTAAATATCTTGAACAGGGTACGGATGATATTACAAACAATGAAGGTATACCGCAACTATTGAACTGGTGGAGGAATCGTGGAACTCAATTCCCAAAACTTAGTAGGATGGTGAAAGATGTGCTTGTAATTTAAGGATCATCAGTAGCTTCGGAGGCAGCTTTCAGCGCGGTAAGATTTCAAATTGGAGACCACAGATATTCGTTAGCAGGAGACAGCTTGGAGATATCAGTGTTATTTAGAGACTGGATAAATGGTGAGCGTAGAAATCAAGGACTTCCAATGTTAGAAAGTCAATTTGAACTTTTCATAGATTCAGCTATTGGATGTGGTAGTGATGATGACATCGAACTTCAAGATCGTCAACGAGCTTTACCAAGACCAGAAGTTGATTACAATCAATTCATAGCTGAGTTAGAAAGAGGATTTACGGGACTATACAACTATTAGTATTACATTCGAGACTTAGTTGAAACAGAACCCTTCCTAGAAGGTGGATGTGTAAACTATGTACCCTACTAATAGTTGTAAATTGAAAT</genome_strand>
        <mrna_strand>AAACTTGGTCTTGACTCTTCTAATAAATGTGAATTTGTTAAATATCTTGAACAGGGTACAGATGATATTACAAACGATAATGGTATACCGGAACTATTGAACTGGTGGAGAAATCGTGGAGCTCAATATCCAAAACTTAGTAGGATGGTGAAGGATGTGCTTGCAATTCAAGGATCATCAGTAGCTTCGGAGGCAGCTTTCAGCGCGGCAAGATTTCAAATTGGAGACCACAGATATTCGTTAGCAGAAGACAGCCTGGAGATATCAGTGTTATTTAGAGATTGGATAAATGCTGAGCGTAGAAATCAAGGACTTCCAAAGTTAGATAGTCAATTTGAACTTTTCATAGATTCAACTATTGGATGTGGTAGTGACGATGGCATCGAAATTCAAGATCGTCAACGAGCTTTACCAAGACCAGAAGTTGATCACAATCAATCCCTAGCTGAGTTAGAAAGAGGATTTACGGGACTATACAACTATTAGTATTACATTCGAGACATAGTTGAAACAGAACCCTTCCTAGAAGGTGGCTGCGTAAGCTATGTACTCTACTAATAGTTGTAAATTGAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E312518" ref_strand="+" ref_description="SGN-E312518 [cLEZ-20-P7]">
      <seq>ttctggattggtattagaccagtacttatggaacaggggttgaatgatgcatgtcaaatgtaagatgatgttagatgcacgtagcatatttgatgaaatgcccgagaggaactcgatttcttggaatacaatggttggagggctagttgatttgggggattatttggaggcatttaggttgttttttatgatgtgggaagagaattctgctgctgatcctcggatatttgcgacaatgattcgagcatcttctggattagaggttatttctttgggacagcaattgcattcttgtgctttgaaaatgggggaaggcgacaatcgctttatatcttgtgctttaattgatatgtatagcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="+" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="100560" stop="101519"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100860" g_stop="101219" g_length="360"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="360" r_length="360" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="+" ref_id="SGN-E312518" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>360</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E312518" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100860" e_stop="101219"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTGGATTGGTATTAGACCAGTACTTATGGAACAGGGTTTTAATGATGCATGTCAAATGTAAGATGATGTTAGATGCACGTAGCATATTTGATGAAATGCCCGAGAGGAACTCGATTTCTTGGAATACAATGGTTGGAGGGCTAGTTGATTTGGGGGATTATTTGGAGGCATTTAGGTTGTTTTTTATGATGTGGGAAGAGAATTCTGCTGCTGATCCTCGGATATTTGCGACAATGATTCGAGCATCTTCTGGATTAGAGGTTATTTCTTTGGGACAGCAATTGCATTCTTGTGCTTTGAAAATGGGGGAAGGCGACAATCGTTTTATATCTTGTGCTTTAATTGATATGTATAGCAA</genome_strand>
        <mrna_strand>TTCTGGATTGGTATTAGACCAGTACTTATGGAACAGGGGTTGAATGATGCATGTCAAATGTAAGATGATGTTAGATGCACGTAGCATATTTGATGAAATGCCCGAGAGGAACTCGATTTCTTGGAATACAATGGTTGGAGGGCTAGTTGATTTGGGGGATTATTTGGAGGCATTTAGGTTGTTTTTTATGATGTGGGAAGAGAATTCTGCTGCTGATCCTCGGATATTTGCGACAATGATTCGAGCATCTTCTGGATTAGAGGTTATTTCTTTGGGACAGCAATTGCATTCTTGTGCTTTGAAAATGGGGGAAGGCGACAATCGCTTTATATCTTGTGCTTTAATTGATATGTATAGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E561175" ref_strand="+" ref_description="SGN-E561175 [17126]">
      <seq>tgattatttaactgttactgcgcattggactgattataattggaatttacaaaaaagaattattggttataaaatttgtcaaaagaaaaaaactggaatgtatattgctactactgtgttggaaattttagattttttcggtctttgtgataaagtcattagtattactttagataatgcttctgctaatttaaatgctattaatatgctagaaactagactttgtcctattagtaaatatgcttttcatgttagatgtgctgcgcatatattaaatttggttgttagtgacggtgtgaaattatttgaaaatagttgtgataaagttgataatgcttgtttttatatttttcatatgaatagtagtagtagaattaatcaatttaaagagctttgtaatgcatgtaaacttccgtttagaaaagttccgaagcatgtaaaaactagatggaattccttttatgaaatgcttgaagttgcttatacatataaagagcctattactatgcaatttaatagtcataatgcttatcctgaatttaaacttaatgatagtgattggaatgaagtaaatgaacttagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="+" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="108182" stop="109364"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108482" g_stop="109064" g_length="583"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="584" r_length="584" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="+" ref_id="SGN-E561175" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>583</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E561175" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108482" e_stop="109064"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATTATTTAACTGTTATTGCGCATTGGATTGGTTATAATTGAAATTTACAAAAAAAAATTATTGGTTATAAAATTTGTCAAAAGAAAAAAA-TGAAATGTATATTGCTATTACCGTGTTGAAAATTTTAGATTTTTTTGGTCTTTCCGATAAAGTCATTAGTATTACTTTAGATAATGCTTTTGCTAATTTAAATGCTATTAATATGTTAGAACCTAGACTTTGTCCGATTAGTAAATATGTTTTTCATGTTAGATGTGCTACGCGTATATTAAATTTGGTAGTTAGAGACGGTGTGAAATTATTTGAAAATAGTTGTGATAAAATTGATAATGCTTGTTTTTATATTTTTTATATGAATAGTAGTGGTAGAATTAATCAATTTAAAGAACTTTGTAATGCATTTAAACTTCCGTTTAGAAAAGTTCTGAAGCATGTAAAAACTAGATGGAATTCCTTTTATGATATGCTTGAAGTTGCTTATGCATATAAGTAACCTATTACTACGCTATTTAATAATCATAATGCTTATCCTGAATCAAAACTTAATAATAGTGACTGGGATGAAGTAAATGAACTTAGAA</genome_strand>
        <mrna_strand>TGATTATTTAACTGTTACTGCGCATTGGACTGATTATAATTGGAATTTACAAAAAAGAATTATTGGTTATAAAATTTGTCAAAAGAAAAAAACTGGAATGTATATTGCTACTACTGTGTTGGAAATTTTAGATTTTTTCGGTCTTTGTGATAAAGTCATTAGTATTACTTTAGATAATGCTTCTGCTAATTTAAATGCTATTAATATGCTAGAAACTAGACTTTGTCCTATTAGTAAATATGCTTTTCATGTTAGATGTGCTGCGCATATATTAAATTTGGTTGTTAGTGACGGTGTGAAATTATTTGAAAATAGTTGTGATAAAGTTGATAATGCTTGTTTTTATATTTTTCATATGAATAGTAGTAGTAGAATTAATCAATTTAAAGAGCTTTGTAATGCATGTAAACTTCCGTTTAGAAAAGTTCCGAAGCATGTAAAAACTAGATGGAATTCCTTTTATGAAATGCTTGAAGTTGCTTATACATATAAAGAGCCTATTACTATGCAATTTAATAGTCATAATGCTTATCCTGAATTTAAACTTAATGATAGTGATTGGAATGAAGTAAATGAACTTAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E481787" ref_strand="+" ref_description="SGN-E481787 [cSTD-19-D23]">
      <seq>aaaatttgtcaaaagaaaaaaactggaatgtatattgctactactgtgttggaaattttagattttttcggtctttgtgataaagtcattagtattactttagataatgcttctgctaatttaaatgctattaatatgctagaaactagactttgtcctattagtaaatatgcttttcatgttagatgtgctgcgcatatattaaatttggttgttagtgacggtgtgaaattatttgaaaatagttgtgataaagttgataatgcttgtttttatatttttcatatgaatagtagtagtagaattaatcaatttaaagagctttgtaatgcatgtaaacttccgtttagaaaagttccgaagcatgtaaaaactagatggaattccttttatgaaatgcttgaagttgcttatacatataaagagcctattactatgcaatttaatagtcataatgcttatcctgaatttaaacttaatgatagtgattggaatgaagtaaatgaacttagaatatttttgaaatcgttttatgatgctactaaaattttttctggaatgtattatcctactatttctgaaattttaatacatatatgtgagatttcatatatctttgctgaatataaaacacatgaattatttaccattgctattgaagttatgattacaaaatttaagaaatatttttttcctatccctcaaatttatttaaactgcattcttttcaccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="+" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="108252" stop="109582"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108552" g_stop="109281" g_length="730"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="733" r_length="733" r_score="0.912"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="+" ref_id="SGN-E481787" ref_strand="+">
        <total_alignment_score>0.912</total_alignment_score>
        <cumulative_length_of_scored_exons>730</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E481787" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108552" e_stop="109281"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATTTGTCAAAAGAAAAAAA-TGAAATGTATATTGCTATTACCGTGTTGAAAATTTTAGATTTTTTTGGTCTTTCCGATAAAGTCATTAGTATTACTTTAGATAATGCTTTTGCTAATTTAAATGCTATTAATATGTTAGAACCTAGACTTTGTCCGATTAGTAAATATGTTTTTCATGTTAGATGTGCTACGCGTATATTAAATTTGGTAGTTAGAGACGGTGTGAAATTATTTGAAAATAGTTGTGATAAAATTGATAATGCTTGTTTTTATATTTTTTATATGAATAGTAGTGGTAGAATTAATCAATTTAAAGAACTTTGTAATGCATTTAAACTTCCGTTTAGAAAAGTTCTGAAGCATGTAAAAACTAGATGGAATTCCTTTTATGATATGCTTGAAGTTGCTTATGCATATAAGTAACCTATTACTACGCTATTTAATAATCATAATGCTTATCCTGAATCAAAACTTAATAATAGTGACTGGGATGAAGTAAATGAACTTAGAATATTTTTGAAATCATTTTATGATGTTAATAAAA-AATTTCTAGAAT-AATTATCCTACTATTTCTGAAATTTTAATACACATATGTGAAATTTTATCTATCTTTTCTGAATATAAAACATATACTTTATTTACCTCTGCTATTGAAGTTATGATTACAAAATTTAAGAAATACTTTTTTCCTATCCCTCAAATTTATTT-AACTGCAATTCTTTTCAACC</genome_strand>
        <mrna_strand>AAAATTTGTCAAAAGAAAAAAACTGGAATGTATATTGCTACTACTGTGTTGGAAATTTTAGATTTTTTCGGTCTTTGTGATAAAGTCATTAGTATTACTTTAGATAATGCTTCTGCTAATTTAAATGCTATTAATATGCTAGAAACTAGACTTTGTCCTATTAGTAAATATGCTTTTCATGTTAGATGTGCTGCGCATATATTAAATTTGGTTGTTAGTGACGGTGTGAAATTATTTGAAAATAGTTGTGATAAAGTTGATAATGCTTGTTTTTATATTTTTCATATGAATAGTAGTAGTAGAATTAATCAATTTAAAGAGCTTTGTAATGCATGTAAACTTCCGTTTAGAAAAGTTCCGAAGCATGTAAAAACTAGATGGAATTCCTTTTATGAAATGCTTGAAGTTGCTTATACATATAAAGAGCCTATTACTATGCAATTTAATAGTCATAATGCTTATCCTGAATTTAAACTTAATGATAGTGATTGGAATGAAGTAAATGAACTTAGAATATTTTTGAAATCGTTTTATGATGCTACTAAAATTTTTTCTGGAATGTATTATCCTACTATTTCTGAAATTTTAATACATATATGTGAGATTTCATATATCTTTGCTGAATATAAAACACATGAATTATTTACCATTGCTATTGAAGTTATGATTACAAAATTTAAGAAATATTTTTTTCCTATCCCTCAAATTTATTTAAACTGC-ATTCTTTTCACCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E567920" ref_strand="+" ref_description="SGN-E567920 [12121]">
      <seq>gtagtagtagaattaatcaatttaaagagctttgtaatgcatgtaaacttccgtttagaaaagttccgaagcatgtaaaaactagatggaattccttttatgaaatgcttgaagttgcttatacatataaagagcctattactatgcaatttaatagtcataatgcttatcctgaatttaaacttaatgatagtgattggaatgaagtaaatgaacttagaatatttttgaaatcgttttatgatgctactaaaattttttctggaatgtattatcctactatttctgaaattttaatacatatatgtgagatttcatatatctttgctgaatataaaacacatgaattatttaccattgctattgaagttatgattacaaaatttaagaaatatttttttcctatccctcaaatttatttaactgcaattcttttcaaccccgaatataaagaatatggtgcaaaagctttagttgaatgcatttatcaaaatttagatattaaaccagaagaaacactcgatttggtaacatgtcaaaatagtataaaattacttgctaaagaaatgtatgataaatattgttctttagataatgttgaaaatcctcaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="+" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="108543" stop="109752"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108843" g_stop="109452" g_length="610"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="612" r_length="612" r_score="0.908"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="+" ref_id="SGN-E567920" ref_strand="+">
        <total_alignment_score>0.908</total_alignment_score>
        <cumulative_length_of_scored_exons>610</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E567920" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108843" e_stop="109452"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAGTGGTAGAATTAATCAATTTAAAGAACTTTGTAATGCATTTAAACTTCCGTTTAGAAAAGTTCTGAAGCATGTAAAAACTAGATGGAATTCCTTTTATGATATGCTTGAAGTTGCTTATGCATATAAGTAACCTATTACTACGCTATTTAATAATCATAATGCTTATCCTGAATCAAAACTTAATAATAGTGACTGGGATGAAGTAAATGAACTTAGAATATTTTTGAAATCATTTTATGATGTTAATAAAA-AATTTCTAGAAT-AATTATCCTACTATTTCTGAAATTTTAATACACATATGTGAAATTTTATCTATCTTTTCTGAATATAAAACATATACTTTATTTACCTCTGCTATTGAAGTTATGATTACAAAATTTAAGAAATACTTTTTTCCTATCCCTCAAATTTATTTAACTGCAATTCTTTTCAACCCCGAATATAAAGAATATGGTGCAAAAGCTTTAATTGAATGCATTTATCAGAATTTAGATATTCAACCTGAAGAAGAACCTGATTTGGTAACATGTTAAAATAATATAAATTTTTTTGCTAAAGAAATGTATGATAAATATTCTTCCTTAGATAATGTTGAAACTCCTCAAA</genome_strand>
        <mrna_strand>GTAGTAGTAGAATTAATCAATTTAAAGAGCTTTGTAATGCATGTAAACTTCCGTTTAGAAAAGTTCCGAAGCATGTAAAAACTAGATGGAATTCCTTTTATGAAATGCTTGAAGTTGCTTATACATATAAAGAGCCTATTACTATGCAATTTAATAGTCATAATGCTTATCCTGAATTTAAACTTAATGATAGTGATTGGAATGAAGTAAATGAACTTAGAATATTTTTGAAATCGTTTTATGATGCTACTAAAATTTTTTCTGGAATGTATTATCCTACTATTTCTGAAATTTTAATACATATATGTGAGATTTCATATATCTTTGCTGAATATAAAACACATGAATTATTTACCATTGCTATTGAAGTTATGATTACAAAATTTAAGAAATATTTTTTTCCTATCCCTCAAATTTATTTAACTGCAATTCTTTTCAACCCCGAATATAAAGAATATGGTGCAAAAGCTTTAGTTGAATGCATTTATCAAAATTTAGATATTAAACCAGAAGAAACACTCGATTTGGTAACATGTCAAAATAGTATAAAATTACTTGCTAAAGAAATGTATGATAAATATTGTTCTTTAGATAATGTTGAAAATCCTCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E426698" ref_strand="-" ref_description="SGN-E426698 [STM-47-E3]">
      <seq>taatactaatagttgtatagtcccgtaaattctttctctaactcagctatagattgaccgtaatcaactactggtcttggtaaagctcgttgacgatcttgaagttccatgccatcgtcactaccacatccaatggcggaatctatgaaaagttcaaattgactatccaactttggaagtccttgatttctccgctcagcatttatccaatctctaaacaacaccgatatctccaaactgtcttctgctaacgaatatctgtggtctccaatttgaaatcttgccgcgctgaaagctgcctccgaagcaactgatgatccttgaattgcaagcacgtccttcaccatcctactaagttttggaaattgagttccacgagccctccaccagttcaataattgtggtataccttcatcgtttgtaatattatctgaaccctgttcaagatatttaacaaattcacatttattagaagagtcaagaccaagtttatgtttcactctaccatgggcacctacctgaggcatagacatttgaggattttcaacattatctaaagaacaatatttatcataaaaaaaaaaagttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="110284" stop="109108"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="109984" g_stop="109409" g_length="576"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="576" r_length="576" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E426698" ref_strand="-">
        <total_alignment_score>0.922</total_alignment_score>
        <cumulative_length_of_scored_exons>576</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E426698" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="109984" e_stop="109409"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATACTAATAGTTGTATAGTTCCGTAAAATCCTCTTTCTAACTCAGCTATAGATTGATTGTAATCAACTTCTGGTCTTGGTAAAGCTCGTTGACGATCTTGAAGTTCGATGCCATCATCACTACCATATCTAATAGCGGAATTTATGAAAAGTTCAAATTGACTATCTAACTTTGGAAGTCCTTGATTTCTCCGCTCAACATTTATCTAATCTCTAAATAACACTGATATCTCCAATCTGTCTACTGCTAACGAATATCTGTAGTCTCCAATTTGAAATCTTGCCGCGCTGAAAGCTGCCTCCGAAGCTACTGATGATCCTTGAATTGCAAGCACATCTTTTACCATCCTACTAAGTTTTGGAAATTGAGTTCCACGAGTCCTTCACCAGTTCAATAGTTGTGGTATACCTTCATCGTTTGTAATATCATC-GAATACTGTTCAAGATACTTAACAAATTCACATTTATTAGAAGAGTCAAGACCAAGTTTATGTTTCATTCCTCCATGAGCACCTACTTGAGGCATAGACGTTTGAGGAGTTTCAACATTATCTAAGGAAGAATATTTATCATAC</genome_strand>
        <mrna_strand>TAATACTAATAGTTGTATAGTCCCGT-AAATTCTTTCTCTAACTCAGCTATAGATTGACCGTAATCAACTACTGGTCTTGGTAAAGCTCGTTGACGATCTTGAAGTTCCATGCCATCGTCACTACCACATCCAATGGCGGAATCTATGAAAAGTTCAAATTGACTATCCAACTTTGGAAGTCCTTGATTTCTCCGCTCAGCATTTATCCAATCTCTAAACAACACCGATATCTCCAAACTGTCTTCTGCTAACGAATATCTGTGGTCTCCAATTTGAAATCTTGCCGCGCTGAAAGCTGCCTCCGAAGCAACTGATGATCCTTGAATTGCAAGCACGTCCTTCACCATCCTACTAAGTTTTGGAAATTGAGTTCCACGAGCCCTCCACCAGTTCAATAATTGTGGTATACCTTCATCGTTTGTAATATTATCTGAACCCTGTTCAAGATATTTAACAAATTCACATTTATTAGAAGAGTCAAGACCAAGTTTATGTTTCACTCTACCATGGGCACCTACCTGAGGCATAGACATTTGAGGATTTTCAACATTATCTAAAGAACAATATTTATCATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E443600" ref_strand="+" ref_description="SGN-E443600 [cSTA-39-C23]">
      <seq>aatttgtattacaaattacaatttacaactattagtagagtgcatagtttacgcagccaccttctaggaagggttctgtttcaactaagcctcaaatgtaatactaatagttgtatagtcccgtaaattctttctctaactcagctatagattgaccgtaatcaactactggtcttggtaaagctcgttgacgatcttgaagttccatgccatcgtcactaccacatccaatggcggaatctatgaaaagttcaaattgactatccaactttggaagtccttgatttctccgctcagcatttattcaatctcttaacaacaccgatatctccaaactgtcttctgctaacgaatatctgtggtctccaatttgaaatcttgccgcgctgaaagctgccttcgaagcaactgatgatccttgaattgcaagcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="110374" stop="109349"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="110069" g_stop="109657" g_length="413"/>
          <reference_exon_boundary r_type="cDNA" r_start="14" r_stop="425" r_length="412" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E443600" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>413</cumulative_length_of_scored_exons>
        <coverage percentage="0.954" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E443600" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="110069" e_stop="109657"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTCAATTTACAACTATTAGTAGAGTACATAGTTTACGCAGCCACCTTCTAGGAAGGGTTCTATTTCAACTAAGTCTCGAATGTAATACTAATAGTTGTATAGTTCCGTAAAATCCTCTTTCTAACTCAGCTATAGATTGATTGTAATCAACTTCTGGTCTTGGTAAAGCTCGTTGACGATCTTGAAGTTCGATGCCATCATCACTACCATATCTAATAGCGGAATTTATGAAAAGTTCAAATTGACTATCTAACTTTGGAAGTCCTTGATTTCTCCGCTCAACATTTATCTAATCTCTAAATAACACTGATATCTCCAATCTGTCTACTGCTAACGAATATCTGTAGTCTCCAATTTGAAATCTTGCCGCGCTGAAAGCTGCCTCCGAAGCTACTGATGATCCTTGAATT</genome_strand>
        <mrna_strand>AATTACAATTTACAACTATTAGTAGAGTGCATAGTTTACGCAGCCACCTTCTAGGAAGGGTTCTGTTTCAACTAAGCCTCAAATGTAATACTAATAGTTGTATAGTCCCGT-AAATTCTTTCTCTAACTCAGCTATAGATTGACCGTAATCAACTACTGGTCTTGGTAAAGCTCGTTGACGATCTTGAAGTTCCATGCCATCGTCACTACCACATCCAATGGCGGAATCTATGAAAAGTTCAAATTGACTATCCAACTTTGGAAGTCCTTGATTTCTCCGCTCAGCATTTATTCAATCTCTTAACAACACCGATATCTCCAAACTGTCTTCTGCTAACGAATATCTGTGGTCTCCAATTTGAAATCTTGCCGCGCTGAAAGCTGCCTTCGAAGCAACTGATGATCCTTGAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E349180" ref_strand="+" ref_description="SGN-E349180 [cTOS-2-C20]">
      <seq>tcttcacaggctgaatatagtttgcagtgactaatatgatcttataggtgtggtggttcacaaaataaaaattataatttgtgtctatcggcagaaatgctaatttagattagcagtaatcgatgggcatgctgttgccattttggcgttagaaatgcttgtacatgagaatatcttttgttggcaaaatatgcttgtatctttctccgattcatctttctttccctttttcttttttcctctggatagtcaagaaaaccccatatgcacttattgggaatgaaaaattccttctttatctgatagaaaatcaagagaagttgtgaattcatctatttgttgtaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="115756" stop="114813"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115456" g_stop="115114" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="343" r_length="343" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="344" polyA_stop="357"/>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E349180" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>343</cumulative_length_of_scored_exons>
        <coverage percentage="0.961" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E349180" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115456" e_stop="115114"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTCACAGGCTGAATATAGTTTGCAGTGACTAATATGATCTTATAGGTGTGGTGGTTCACAAAATAAAAATTATAATTTGTGTCTATCGGCAGAAATGCTAATTTAGATTAGCAGTAATCGATGGGCATGCTGTTGCCATTTTGGCGTTAGAAATGCTTGTACATGAGAATATCTTTTGTTGGCAAAATATGCTTGTATCTTTCTCCGATTCATCTTTCTTTCCCTTTTTCTTTTTTCCTCTGGATAGTCAAGAAAACCCCATATGCACTTATTGGGAATGAAAAATTCCTTCTTTATCTGATAGAAAATCAAGAGAAGTTGTGAATTCATCTATTTGTTGT</genome_strand>
        <mrna_strand>TCTTCACAGGCTGAATATAGTTTGCAGTGACTAATATGATCTTATAGGTGTGGTGGTTCACAAAATAAAAATTATAATTTGTGTCTATCGGCAGAAATGCTAATTTAGATTAGCAGTAATCGATGGGCATGCTGTTGCCATTTTGGCGTTAGAAATGCTTGTACATGAGAATATCTTTTGTTGGCAAAATATGCTTGTATCTTTCTCCGATTCATCTTTCTTTCCCTTTTTCTTTTTTCCTCTGGATAGTCAAGAAAACCCCATATGCACTTATTGGGAATGAAAAATTCCTTCTTTATCTGATAGAAAATCAAGAGAAGTTGTGAATTCATCTATTTGTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E353668" ref_strand="+" ref_description="SGN-E353668 [cTOS-10-H21]">
      <seq>tcttcacaggctgaatatagtttgcagtgactaatatgatcttataggtgtggtggttcacaaaataaaaattataatttgtgtctatcggcagaaatgctaatttagattagcagtaatcgatgggcatgctgttgccattttggcgttagaaatgcttgtacatgagaatatcttttgttggcaaaatatgcttgtatctttctccgattcatctttctttccctttttcttttttcctctggatagtcaagaaaaccccatatgcacttattgggaatgaaaaattccttctttatctgatagaaaatcaagagaagttgtgaattcatctatttgttgtaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="115756" stop="114813"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115456" g_stop="115114" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="343" r_length="343" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="344" polyA_stop="357"/>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E353668" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>343</cumulative_length_of_scored_exons>
        <coverage percentage="0.961" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E353668" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115456" e_stop="115114"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTCACAGGCTGAATATAGTTTGCAGTGACTAATATGATCTTATAGGTGTGGTGGTTCACAAAATAAAAATTATAATTTGTGTCTATCGGCAGAAATGCTAATTTAGATTAGCAGTAATCGATGGGCATGCTGTTGCCATTTTGGCGTTAGAAATGCTTGTACATGAGAATATCTTTTGTTGGCAAAATATGCTTGTATCTTTCTCCGATTCATCTTTCTTTCCCTTTTTCTTTTTTCCTCTGGATAGTCAAGAAAACCCCATATGCACTTATTGGGAATGAAAAATTCCTTCTTTATCTGATAGAAAATCAAGAGAAGTTGTGAATTCATCTATTTGTTGT</genome_strand>
        <mrna_strand>TCTTCACAGGCTGAATATAGTTTGCAGTGACTAATATGATCTTATAGGTGTGGTGGTTCACAAAATAAAAATTATAATTTGTGTCTATCGGCAGAAATGCTAATTTAGATTAGCAGTAATCGATGGGCATGCTGTTGCCATTTTGGCGTTAGAAATGCTTGTACATGAGAATATCTTTTGTTGGCAAAATATGCTTGTATCTTTCTCCGATTCATCTTTCTTTCCCTTTTTCTTTTTTCCTCTGGATAGTCAAGAAAACCCCATATGCACTTATTGGGAATGAAAAATTCCTTCTTTATCTGATAGAAAATCAAGAGAAGTTGTGAATTCATCTATTTGTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E353766" ref_strand="+" ref_description="SGN-E353766 [cTOS-10-H8]">
      <seq>gatgcacgaacaaaagatgcatttgatctgaagaagactgctcaagaggcacaacgtttggctgaagcagttggtgcaggaatgggaggctctgtacaaggttttatgaagagggtcttcacaggctgaatatagtttgcagtgactaatatgatcttataggtgtggtggttcacaaaataaaaattataatttgtgtctatcggcagaaatgctaatttagattagcagtaatcgatgggcatgctgttgccattttggcgttagaaatgcttgtacatgagaatatcttttgttggcaaaatatgcttgtatctttctccgattaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="115980" stop="114943"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115680" g_stop="115633" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="48" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="115632" i_stop="115524" i_length="109">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="115523" g_stop="115244" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="49" r_stop="328" r_length="280" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="329" polyA_stop="338"/>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E353766" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>328</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E353766" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115680" e_stop="115633"/>
          <exon e_start="115523" e_stop="115244"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGCACGAACAAAAGATGCATTTGATCTGAAGAAGACTGCTCAAGAGGTATTTTGCTTCTAATGTTATTGTATGTAGACCCCCTGAAATGAATTGGACTAGGATTTCAGAGTATTGGTTCTGACTTCCTGAGGATAATCTATGAACAATTTTGCAGGCACAACGTTTGGCTGAAGCAGTTGGTGCAGGAATGGGAGGCTCTGTACAAGGTTTTATGAAGAGGGTCTTCACAGGCTGAATATAGTTTGCAGTGACTAATATGATCTTATAGGTGTGGTGGTTCACAAAATAAAAATTATAATTTGTGTCTATCGGCAGAAATGCTAATTTAGATTAGCAGTAATCGATGGGCATGCTGTTGCCATTTTGGCGTTAGAAATGCTTGTACATGAGAATATCTTTTGTTGGCAAAATATGCTTGTATCTTTCTCCGATTC</genome_strand>
        <mrna_strand>GATGCACGAACAAAAGATGCATTTGATCTGAAGAAGACTGCTCAAGAG.............................................................................................................GCACAACGTTTGGCTGAAGCAGTTGGTGCAGGAATGGGAGGCTCTGTACAAGGTTTTATGAAGAGGGTCTTCACAGGCTGAATATAGTTTGCAGTGACTAATATGATCTTATAGGTGTGGTGGTTCACAAAATAAAAATTATAATTTGTGTCTATCGGCAGAAATGCTAATTTAGATTAGCAGTAATCGATGGGCATGCTGTTGCCATTTTGGCGTTAGAAATGCTTGTACATGAGAATATCTTTTGTTGGCAAAATATGCTTGTATCTTTCTCCGATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E422962" ref_strand="-" ref_description="SGN-E422962 [STM-41-E6]">
      <seq>atttatgacttcagctgccaccggaaatattcctgatcagaaccctattccgactagctttaatccgaccgactctaccgcatcatcatcttggaaggaagaagaaaggacacgttaccaggaaactgatgaaaaatctagctcgagaacaaagcggcctaaagcgcattacaaggacgaagaggcccgtgtactcagtgcctctctctctcatgtggtgcaagggatgtcggagtgtcaccttccattgttggatcatttcctcggaaagaagctgcactagtggagtattttatggatgagtgtctggaaagactcattgatatcattgaatcaaggaacgatctgaaaaacttgatacctagtgagcgggtagcaaagcttgtaagaattcgcttggaaatgcaaaccccttacatatcaaaatggccacaagctctcagtatacaggctcaacccttgaatgttccaacaagcttcaagcagcgtgccatgctggttgatgagatatggcatgctgttggtgatgatgccaacgaaattgattggtatgtgaagcgcactgttctaggtggaatatactccacgacagaactatacatgttgacagatagctctccagattttcgtgatacatgggcattcttggatgcacgaacaaaagatgcatttgatctgaagaagactgctcaagaggcacaacgtttggctgaagcagttggtgcaggaatgggaggctctgtacaaggttttatgaagagggtcttcacaggctgaatatagtttgcagtgagtaaaatatgatcttataggtgtggtggttcacaaaataaaaattataatttgtgtctatcagcagaaatgctaatttagattagcagtattcgatgggcatccggttgccattttggcgttagaatatgcttgtacatgagaatgtcttttgttggcaaaatagcttctttccctttcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="121263" stop="114950"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="120963" g_stop="120732" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="217" r_length="217" r_score="0.901"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120731" i_stop="119906" i_length="826">
            <donor d_prob="0.993" d_score="0.96"/>
            <acceptor a_prob="0.105" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="119905" g_stop="119835" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="288" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="119834" i_stop="117701" i_length="2134">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.904" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="117700" g_stop="117539" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="450" r_length="162" r_score="0.969"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="117538" i_stop="117438" i_length="101">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.673" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="117437" g_stop="117266" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="451" r_stop="622" r_length="172" r_score="0.994"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="117265" i_stop="115707" i_length="1559">
            <donor d_prob="0.833" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="115706" g_stop="115633" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="623" r_stop="696" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="115632" i_stop="115524" i_length="109">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="115523" g_stop="115266" g_length="258"/>
          <reference_exon_boundary r_type="cDNA" r_start="697" r_stop="957" r_length="261" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E422962" ref_strand="-">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>969</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E422962" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="120963" e_stop="120732"/>
          <exon e_start="119905" e_stop="119835"/>
          <exon e_start="117700" e_stop="117539"/>
          <exon e_start="117437" e_stop="117266"/>
          <exon e_start="115706" e_stop="115633"/>
          <exon e_start="115523" e_stop="115266"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCATGACTTCAGCTGCCACCGGAAATATTCCTGATCAGAACCCTATTCCGGTTAACCCTATTCTTCCTAGCTCTAATCCGACCGACTCTACCGCATCATCATCTTGGAAGGAAGAAGAAAGGACACGTTTTCAGGATACTGATGCAAAATCTAGCTCGAGAACAAAGCGGCCTAAAGCGCATTACAAGGACGAAGAGGCCCTTGTACTCAGTGCCTCTCTTTCTCATGTGGTTTGTTACATTTACTTTCTCTTTCGTTTCTTGTGCAGATATGAAATTTTGGATTTATATGTGTAGATTAATGTGTTGTGTCTTATGTGTTTTTAATTGAATTTATTTGTTGACTTGGTGAAATTGGCTGCATAAATTGATTACTTGACCTTCGAATTTGTTGAACCTGCTGCTGTCTTTCTCCCCGAAGAAATGGGATTGGGACCTTTATGCATTGTGATTCTATTGCCAAACCTCTTTGGCGTAGAAGTAGTTTCTGACAAGTACATTCAGTAATCCAATTGGAAAAGATAAAAAGATAAATTATGAAAAAGTAGTTCCTTTGAAAGTTAATAGAGCTTTCCTGATGAGAGGAAGATAATGCCTTGTAATATAAGGTTCATCTTATATACATACCCAAAGGAAAGTTTTACTTTGGTATGTGGGTATGGAGGAAGATGCTTTCCTATATTATTTTTAGAAAAGATATTTTTACTCTGAGAAATCATTTTCTTGATGGTTTTCCTCTGTTTAATTGGGTATGAAGCCGGTGACTGCCAAGTGTATGGTAAAGAAGAGTATTTGTAAAGGGAATCGACTTCCCAACAAGTGAAGGAAGTCATTGCTCCCTTTTGGTGAAAATATATTCATTGGAGATAACATTTTTCACAATTAGGGCAACCAAACACTGAAAGGATTTCGTCAAGGAAAATTCTTTCCTAAGAACATATTCTGACATACAAACACATATTTTCTATCCCTTCATATATATATCAGGCTTGTAATTGGTGCTGGGTAACTTGTTTGCAGATTCGGCTAGGATGGACTGAAACCGCCATGATTGCAGGTGCAAGGGATGTCGGAGTGTCACCTTCCATTGTTGGATCATTTCCTCGGAAAGAAGCTGCACTAGTGGAGGTAAATGAGGGTTCACCTACATTTACTCATAGTTCTGGATTTTTTAATGTGACTGGACTTTGTGGGCATTATAGGGCTCCAACATATTTGGTTTTGCTAAAAATGTTGATATAAGATTATCTGCCTCTCAGTTTTGTTTATCTTTTATTTTGGTTTTCCTATTTATCTATCTGCACTTAATTTGTCTGGTACGAGTATAACTCAAAGGAACTCCATTGAGGTAATATGCAAAGTCAACAACGTAATAGTTGTGTTTCCTTAATAAAAGGATTTTTAATGATTTTGGTAAAGTAAAAGGATTATTAATGATATATCCTTGACACCTTATAAGTTATAAGTATATAGTTTATGTAGCCATTCAAATGACTACACTTGGATCGAGGTTTTCCAAAACGCCCTCTTCCTCGCCGATTCTCCATAGACTGGTATGTACGCTTTTCTGTGGTTTGAGATGCGAGAATAGAGGAGTCAACAATGAGTGATGAAACTTCTTTGTGACTGGGAGGTGTAGCAAGACGAAATAGACGACAGAAGAATTCATCAATTGAGGGAACTGTAGGATTGGCTAGAATCTGGTCACATACAGAGCTATGGTCTGTAGGAAGTCCAACAAGTGTAAGAATTAGAAACAATGTCTGCCTTTGTTCTTGTTGCTTTTCCACGATTGTCGTGATACGCATCAATGTTTCAAATTCCTCCATGACTGCCTGTACTTGTCCGAAGTAAGTAAACATATCGGATTCTTGTTTCTTTAAGTTGGTCATCCGAGATATCACATCATAGTATCGAGATATGTCGTTAGTGTATAAAGCACGTGCCTTTTCCCAAACTAAATAACATGTCTGGAATTGGCGAAACAAGGGCATCAACTTAGAATCAACAGAGCGCCAAAGGAGACTACATAATTGGGCATCCACTTTCTCCCATTGTGCTTCGGCTTTTGCACCATGGTCATTAGACTTTGTCTTTTCATCTACAATACAAGCATTGTTTGTTAAGTGATCTTGAACACCTTGACCCTTGCACCACAACTCAACTGAAGAAGCCCAAGCTAAATAGTTTGAACTTCAGATTAATGGTTATGAAGTGATTGTAGGGCTTGAACTTCCAATCCCTGTATTTTTGGAGCCAAAAACATCACACCCGGAAGACATTTTTTTGAAATTTGGCTTGAAGAGAGTAAGAAACTTGTTGGAAACTGCCGGAATCTACCTATAGTAGCCTAAAAGTTCTGATATCGCTGGAAACTTGCCGAAAACTGCCTGAAAATCACCGGAACCCTAATTCCGGTGATCGGATCTAGAGAAAACTGTCCATGTTCTGGTCGGAAATACTGGGCGACCCAACGGAAGAAAATTGCTCGAAAAAAAATTGACAGGAGCAGCACTCACGTGCCGCGTGCGTGAACAAATCTTGCCGGAAAATTTTCACCTTCGATCTGCGCGTGGGGGTTATTTTCCGGTGGGTCTGGCTGGGGGTCGTCTGAGCTTCCCGAGCCTCGTGACAGTGTTGTCTTTTGCACAACACCTTCAAAATAAACGATGACACAAATCAGTCCACCGTCGTCACCGAAATTTGACACCGATGACTTGAAGTGCTCACCAATGCTCTTATACCATGTGAGATATATATGGCAAGAATATTATTCAATTGTGTATATACATTGTTACATTAAGACCCTATTTATAGACACTACATTGGAACCCTTTTCCGACTAGGATTCCTATTCCTATTCTTCTTACTATTCCTATTCTAAGTAAGAAATACTTACTCCTATTCTAACAATTATGTGCTCTCTTTGATGACCATACCAAATAACGAGCCAAATCCTAAGATATTGCTGATTTGTTTAGCATTTGCGAGAAGGCCTAAAAAGCTAGATGTTTTGGTCTCTGACTTTGTTTTAATGCACATTAATTACCATTGGCAAGGCTCTTAATGCTCATTCAGCTGTCAAGCTTCGTCTTTTCTTGAATTATATACAACATTGCTTTCAGACTTATACTGGCTTCTTACATGTTTATTATTTATAGTTTAGCTGATCTAGTTAATGCTTGTATTTTCTTTCTTTTTTCGGCAAATCAATAAGTAAATCCTCTGTTGATCTTTTATATTGAACATCTTTTTTTCTCAGTATTTTATGGACGAGTGTCTGGAAAGACTCATTGATATCATTGAATCAAGGAACGATCTGAATAACTTAATACCTAGTGAGCGGATAGCAAAGCTTGTACGAATTCGCTTGGAAATGCAAACCCCTTACATATCAAAATGGCCACAAGCTCTCAGTATACAGGTACTTATCTCCTTAAAGTTTACATCTTTTAAGGCTCCTTTCTTGTGTGGTGGGCCTGTATAATGAGCAGAAGTGTGTCAGATAACAACTACTGATTGTAGGCTCAACCCTTGAATGTTCCAACAAGCTTCAAGCAGCGTGCAATGCTGGTTGATGAGATATGGCATGCTGTTGGTGATGATGCCAACGAAATTGATTGGTATGTGAAGCGCACTGTTCTAGGTGGAATATACTCCACGACAGAACTATACATGTTGACAGATAGCTCTCCAGGTGTGCCATTGTAACTGCTGTGTTTTCTGTCCTATGCTTGTTCTTCTCGTGCGATCCTTATAATATTATGGTATAAGTCTTATTAAAATTTTAACATTTAATCAACAATCGAACTCCTTTATAATCCTAACATGCCCCACTATCAACAGTTCTTCCTGCTTCCTACTGCTTTGTTGTCATGGAAGTCATAGGATTGGAAGGAAGCCTCTCAGGTTATTAGAAATTGTTCATATTCCTTGTTTCGCCGAGTCACTCTTTAAATTACAGAAGAAAGCATATTTTTTGTAGGAGGCATGAAAACAGAAGTAATTCTCGGGATAATAATTCCGCAAAAGATGCACTCTTGCTGGTGCCTTAGTTCATTAAACTGAAGTTGCCAGTAGAGGACATATTTTGCAATAACAGTGTTGTACCTGTGGGAATATATGAAATCTACGCACTTAATCCTAAATGAATGACCAACTTTTTGGGTCATCCCATGATACTGCTGGCATAAAGTATTTAAGATAATATATGCTATAAATTTCGTATAAGGCATCCACTAATAGATTTTAACGTACAGTATTTTATCAACCCAATCCTAAAATTTCAAATGCAATTATGGACCCAACATGTACTTCCCCAACTCTTGTATTGTGTCAAGTGAAGAACATGACATGTGCCCTTGTTAGAAAACACGATCTCCCGCCGCAGCACGTGATGTGTGGGTTAGGCACATGTGACGGATTTGAACCCTGCTGCAAACAAAAGCTTGGTGTACTTAAGTGGTGAAGTTCTGATTCGTCGTATAAAGTAGATGAGATATTATATGTAATAAACACCGTATGAAGCATCAACAATACACTGTAATGTACAAAATTTTAGGATATGCAATCCTAAAAATAAAAAATGTAATATTCAGATCCATTATGTCGCCTTTCCAACTCTCTGAATACTTTCAAGTAGAAAGAAGACACTTGTGACAATCAAAATAAAACAATAAATGACACTTGCTCCGGAAGGAGTATCTGGTATGAGTTCCTCTTATGGTACATTGTTGTGACGACTTTGCTCTCACTAGCTATGTATTACGTGTTGCATATTTTTCAATAGAAATTACTTTGGAGGGGGTCCTCTGCGAGAAATTATCTGTTGGATTAGGGATCTTTTGGTGAAAGGATGTAAATACTAATGATTTTGGAAAGGGACCACACCTCATAACAGATATCCCAAAGGATATGGATTTCATTTGAATTTGGTGCTTTCTAAGAATCTAAGCTTCATGAAGACAACTTTGCCTATCATCATTTCCAAGTTACTTGCAGCGACTTCTGATCCTGAAGTAATATCCTCCATGGGCAAATCTTCTCCTTTTACTCTTCGATTTAGAGCCATTGTTGAAACCTAAATGCCTCCAACCAACCAACCCTCTGATAATTAGTTGGGCAGCTAATATACCATACAAAAGTCCCCTTTGTGAGCAACCTATATTGGAACACTTCCCACTTTCACCAATAATTTGTGTTCAGAAAAGTCTGTCTTCTATTTGTGGGATTTATTGTTTATGTTTCTGTTGACAGATTTTCGTGATACATGGGCATTCTTGGATGCACGAACAAAAGATGCATTTGATCTGAAGAAGACTGCTCAAGAGGTATTTTGCTTCTAATGTTATTGTATGTAGACCCCCTGAAATGAATTGGACTAGGATTTCAGAGTATTGGTTCTGACTTCCTGAGGATAATCTATGAACAATTTTGCAGGCACAACGTTTGGCTGAAGCAGTTGGTGCAGGAATGGGAGGCTCTGTACAAGGTTTTATGAAGAGGGTCTTCACAGGCTGAATATAGTTTGCAGTGACT--AATATGATCTTATAGGTGTGGTGGTTCACAAAATAAAAATTATAATTTGTGTCTATCGGCAGAAATGCTAATTTAGATTAGCAGTAATCGATGGGCATGCTGTTGCCATTTTGGCGTTAGAA-ATGCTTGTACATGAGAATATCTTTTGTTGGCAAAATA</genome_strand>
        <mrna_strand>ATTTATGACTTCAGCTGCCACCGGAAATATTCCTGATCAGAACCCTATTCC-G--------A------CTAGCTTTAATCCGACCGACTCTACCGCATCATCATCTTGGAAGGAAGAAGAAAGGACACGTTACCAGGAAACTGATGAAAAATCTAGCTCGAGAACAAAGCGGCCTAAAGCGCATTACAAGGACGAAGAGGCCCGTGTACTCAGTGCCTCTCTCTCTCATGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAAGGGATGTCGGAGTGTCACCTTCCATTGTTGGATCATTTCCTCGGAAAGAAGCTGCACTAGTGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTTATGGATGAGTGTCTGGAAAGACTCATTGATATCATTGAATCAAGGAACGATCTGAAAAACTTGATACCTAGTGAGCGGGTAGCAAAGCTTGTAAGAATTCGCTTGGAAATGCAAACCCCTTACATATCAAAATGGCCACAAGCTCTCAGTATACAG.....................................................................................................GCTCAACCCTTGAATGTTCCAACAAGCTTCAAGCAGCGTGCCATGCTGGTTGATGAGATATGGCATGCTGTTGGTGATGATGCCAACGAAATTGATTGGTATGTGAAGCGCACTGTTCTAGGTGGAATATACTCCACGACAGAACTATACATGTTGACAGATAGCTCTCCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTCGTGATACATGGGCATTCTTGGATGCACGAACAAAAGATGCATTTGATCTGAAGAAGACTGCTCAAGAG.............................................................................................................GCACAACGTTTGGCTGAAGCAGTTGGTGCAGGAATGGGAGGCTCTGTACAAGGTTTTATGAAGAGGGTCTTCACAGGCTGAATATAGTTTGCAGTGAGTAAAATATGATCTTATAGGTGTGGTGGTTCACAAAATAAAAATTATAATTTGTGTCTATCAGCAGAAATGCTAATTTAGATTAGCAGTATTCGATGGGCATCCGGTTGCCATTTTGGCGTTAGAATATGCTTGTACATGAGAATGTCTTTTGTTGGCAAAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E703563" ref_strand="+" ref_description="SGN-E703563 [FA21DD08]">
      <seq>attcatactacactctctctattgaagctccaaaatagttgcgaacaaatcgttgacaatgtatcgatcggcggcaaagaggttactaccggcgttttaccggcgacgccaggatgcagtatcatgcattcgaaccctagcagcagactaccccactcgattcatgacttcagctgccaccggaaatattcctgatcagaaccctattccggttaaccctattcttcctagctctaatccgaccgactctaccgcatcatcatcttggaaggaagaagaaaggacacgttttcaggatactgatgcaaaatctagctcgagaacaaagcggcctaaagcgcattacaaggacgaagaggcccttgtactcagtgcctctctttctcatgtgattcggctaggatggactgaaaccgccatgattgcaggtgcaagggatgtcggagtgtcaccttccattgttggatcatttcctcggaaagaagctgcactagtggagtattttatggacgagtgtctggaaagactcattgatatcattgaatcaaggaacgatctgaataacttaatacctagtgagcggatagcaaagcttgtacgaattcgcttggaaatgcaaaccccttacatatcaaaatggccacaagctctcagtatacaggctcaacccttgaatgttccaacaagcttcaagcagcgtgcaatgctggttgatgagatatggcatgctgttggtgatgatgccaacgaaattgattggtgtgaagcgcactgttctaggtggaatatactccacgacagaactatacatgttgacagatagctctccagattttcgtgatacatgggcattcttggatgcacgaacaaaagatgcatttgatctgaagaagactgctcaagaggcacaacgtttggctgaaccatttggtgcagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="121422" stop="115192"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121122" g_stop="120732" g_length="391"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="391" r_length="391" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120731" i_stop="119943" i_length="789">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="119942" g_stop="119835" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="392" r_stop="499" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="119834" i_stop="117701" i_length="2134">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.904" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="117700" g_stop="117539" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="500" r_stop="661" r_length="162" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="117538" i_stop="117438" i_length="101">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.673" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="117437" g_stop="117266" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="662" r_stop="831" r_length="170" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="117265" i_stop="115707" i_length="1559">
            <donor d_prob="0.833" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="115706" g_stop="115633" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="832" r_stop="905" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="115632" i_stop="115524" i_length="109">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="115523" g_stop="115492" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="906" r_stop="937" r_length="32" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E703563" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>939</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E703563" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121122" e_stop="120732"/>
          <exon e_start="119942" e_stop="119835"/>
          <exon e_start="117700" e_stop="117539"/>
          <exon e_start="117437" e_stop="117266"/>
          <exon e_start="115706" e_stop="115633"/>
          <exon e_start="115523" e_stop="115492"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCATACTACACTCTCTCTATTGAAGCTCCAAAATAGTTGCGAACAAATCGTTGACAATGTATCGATCGGCGGCAAAGAGGTTACTACCGGCGTTTTACCGGCGACGCCAGGATGCAGTATCATGCATTCGAACCCTAGCAGCAGACTACCCCACTCGATTCATGACTTCAGCTGCCACCGGAAATATTCCTGATCAGAACCCTATTCCGGTTAACCCTATTCTTCCTAGCTCTAATCCGACCGACTCTACCGCATCATCATCTTGGAAGGAAGAAGAAAGGACACGTTTTCAGGATACTGATGCAAAATCTAGCTCGAGAACAAAGCGGCCTAAAGCGCATTACAAGGACGAAGAGGCCCTTGTACTCAGTGCCTCTCTTTCTCATGTGGTTTGTTACATTTACTTTCTCTTTCGTTTCTTGTGCAGATATGAAATTTTGGATTTATATGTGTAGATTAATGTGTTGTGTCTTATGTGTTTTTAATTGAATTTATTTGTTGACTTGGTGAAATTGGCTGCATAAATTGATTACTTGACCTTCGAATTTGTTGAACCTGCTGCTGTCTTTCTCCCCGAAGAAATGGGATTGGGACCTTTATGCATTGTGATTCTATTGCCAAACCTCTTTGGCGTAGAAGTAGTTTCTGACAAGTACATTCAGTAATCCAATTGGAAAAGATAAAAAGATAAATTATGAAAAAGTAGTTCCTTTGAAAGTTAATAGAGCTTTCCTGATGAGAGGAAGATAATGCCTTGTAATATAAGGTTCATCTTATATACATACCCAAAGGAAAGTTTTACTTTGGTATGTGGGTATGGAGGAAGATGCTTTCCTATATTATTTTTAGAAAAGATATTTTTACTCTGAGAAATCATTTTCTTGATGGTTTTCCTCTGTTTAATTGGGTATGAAGCCGGTGACTGCCAAGTGTATGGTAAAGAAGAGTATTTGTAAAGGGAATCGACTTCCCAACAAGTGAAGGAAGTCATTGCTCCCTTTTGGTGAAAATATATTCATTGGAGATAACATTTTTCACAATTAGGGCAACCAAACACTGAAAGGATTTCGTCAAGGAAAATTCTTTCCTAAGAACATATTCTGACATACAAACACATATTTTCTATCCCTTCATATATATATCAGGCTTGTAATTGGTGCTGGGTAACTTGTTTGCAGATTCGGCTAGGATGGACTGAAACCGCCATGATTGCAGGTGCAAGGGATGTCGGAGTGTCACCTTCCATTGTTGGATCATTTCCTCGGAAAGAAGCTGCACTAGTGGAGGTAAATGAGGGTTCACCTACATTTACTCATAGTTCTGGATTTTTTAATGTGACTGGACTTTGTGGGCATTATAGGGCTCCAACATATTTGGTTTTGCTAAAAATGTTGATATAAGATTATCTGCCTCTCAGTTTTGTTTATCTTTTATTTTGGTTTTCCTATTTATCTATCTGCACTTAATTTGTCTGGTACGAGTATAACTCAAAGGAACTCCATTGAGGTAATATGCAAAGTCAACAACGTAATAGTTGTGTTTCCTTAATAAAAGGATTTTTAATGATTTTGGTAAAGTAAAAGGATTATTAATGATATATCCTTGACACCTTATAAGTTATAAGTATATAGTTTATGTAGCCATTCAAATGACTACACTTGGATCGAGGTTTTCCAAAACGCCCTCTTCCTCGCCGATTCTCCATAGACTGGTATGTACGCTTTTCTGTGGTTTGAGATGCGAGAATAGAGGAGTCAACAATGAGTGATGAAACTTCTTTGTGACTGGGAGGTGTAGCAAGACGAAATAGACGACAGAAGAATTCATCAATTGAGGGAACTGTAGGATTGGCTAGAATCTGGTCACATACAGAGCTATGGTCTGTAGGAAGTCCAACAAGTGTAAGAATTAGAAACAATGTCTGCCTTTGTTCTTGTTGCTTTTCCACGATTGTCGTGATACGCATCAATGTTTCAAATTCCTCCATGACTGCCTGTACTTGTCCGAAGTAAGTAAACATATCGGATTCTTGTTTCTTTAAGTTGGTCATCCGAGATATCACATCATAGTATCGAGATATGTCGTTAGTGTATAAAGCACGTGCCTTTTCCCAAACTAAATAACATGTCTGGAATTGGCGAAACAAGGGCATCAACTTAGAATCAACAGAGCGCCAAAGGAGACTACATAATTGGGCATCCACTTTCTCCCATTGTGCTTCGGCTTTTGCACCATGGTCATTAGACTTTGTCTTTTCATCTACAATACAAGCATTGTTTGTTAAGTGATCTTGAACACCTTGACCCTTGCACCACAACTCAACTGAAGAAGCCCAAGCTAAATAGTTTGAACTTCAGATTAATGGTTATGAAGTGATTGTAGGGCTTGAACTTCCAATCCCTGTATTTTTGGAGCCAAAAACATCACACCCGGAAGACATTTTTTTGAAATTTGGCTTGAAGAGAGTAAGAAACTTGTTGGAAACTGCCGGAATCTACCTATAGTAGCCTAAAAGTTCTGATATCGCTGGAAACTTGCCGAAAACTGCCTGAAAATCACCGGAACCCTAATTCCGGTGATCGGATCTAGAGAAAACTGTCCATGTTCTGGTCGGAAATACTGGGCGACCCAACGGAAGAAAATTGCTCGAAAAAAAATTGACAGGAGCAGCACTCACGTGCCGCGTGCGTGAACAAATCTTGCCGGAAAATTTTCACCTTCGATCTGCGCGTGGGGGTTATTTTCCGGTGGGTCTGGCTGGGGGTCGTCTGAGCTTCCCGAGCCTCGTGACAGTGTTGTCTTTTGCACAACACCTTCAAAATAAACGATGACACAAATCAGTCCACCGTCGTCACCGAAATTTGACACCGATGACTTGAAGTGCTCACCAATGCTCTTATACCATGTGAGATATATATGGCAAGAATATTATTCAATTGTGTATATACATTGTTACATTAAGACCCTATTTATAGACACTACATTGGAACCCTTTTCCGACTAGGATTCCTATTCCTATTCTTCTTACTATTCCTATTCTAAGTAAGAAATACTTACTCCTATTCTAACAATTATGTGCTCTCTTTGATGACCATACCAAATAACGAGCCAAATCCTAAGATATTGCTGATTTGTTTAGCATTTGCGAGAAGGCCTAAAAAGCTAGATGTTTTGGTCTCTGACTTTGTTTTAATGCACATTAATTACCATTGGCAAGGCTCTTAATGCTCATTCAGCTGTCAAGCTTCGTCTTTTCTTGAATTATATACAACATTGCTTTCAGACTTATACTGGCTTCTTACATGTTTATTATTTATAGTTTAGCTGATCTAGTTAATGCTTGTATTTTCTTTCTTTTTTCGGCAAATCAATAAGTAAATCCTCTGTTGATCTTTTATATTGAACATCTTTTTTTCTCAGTATTTTATGGACGAGTGTCTGGAAAGACTCATTGATATCATTGAATCAAGGAACGATCTGAATAACTTAATACCTAGTGAGCGGATAGCAAAGCTTGTACGAATTCGCTTGGAAATGCAAACCCCTTACATATCAAAATGGCCACAAGCTCTCAGTATACAGGTACTTATCTCCTTAAAGTTTACATCTTTTAAGGCTCCTTTCTTGTGTGGTGGGCCTGTATAATGAGCAGAAGTGTGTCAGATAACAACTACTGATTGTAGGCTCAACCCTTGAATGTTCCAACAAGCTTCAAGCAGCGTGCAATGCTGGTTGATGAGATATGGCATGCTGTTGGTGATGATGCCAACGAAATTGATTGGTATGTGAAGCGCACTGTTCTAGGTGGAATATACTCCACGACAGAACTATACATGTTGACAGATAGCTCTCCAGGTGTGCCATTGTAACTGCTGTGTTTTCTGTCCTATGCTTGTTCTTCTCGTGCGATCCTTATAATATTATGGTATAAGTCTTATTAAAATTTTAACATTTAATCAACAATCGAACTCCTTTATAATCCTAACATGCCCCACTATCAACAGTTCTTCCTGCTTCCTACTGCTTTGTTGTCATGGAAGTCATAGGATTGGAAGGAAGCCTCTCAGGTTATTAGAAATTGTTCATATTCCTTGTTTCGCCGAGTCACTCTTTAAATTACAGAAGAAAGCATATTTTTTGTAGGAGGCATGAAAACAGAAGTAATTCTCGGGATAATAATTCCGCAAAAGATGCACTCTTGCTGGTGCCTTAGTTCATTAAACTGAAGTTGCCAGTAGAGGACATATTTTGCAATAACAGTGTTGTACCTGTGGGAATATATGAAATCTACGCACTTAATCCTAAATGAATGACCAACTTTTTGGGTCATCCCATGATACTGCTGGCATAAAGTATTTAAGATAATATATGCTATAAATTTCGTATAAGGCATCCACTAATAGATTTTAACGTACAGTATTTTATCAACCCAATCCTAAAATTTCAAATGCAATTATGGACCCAACATGTACTTCCCCAACTCTTGTATTGTGTCAAGTGAAGAACATGACATGTGCCCTTGTTAGAAAACACGATCTCCCGCCGCAGCACGTGATGTGTGGGTTAGGCACATGTGACGGATTTGAACCCTGCTGCAAACAAAAGCTTGGTGTACTTAAGTGGTGAAGTTCTGATTCGTCGTATAAAGTAGATGAGATATTATATGTAATAAACACCGTATGAAGCATCAACAATACACTGTAATGTACAAAATTTTAGGATATGCAATCCTAAAAATAAAAAATGTAATATTCAGATCCATTATGTCGCCTTTCCAACTCTCTGAATACTTTCAAGTAGAAAGAAGACACTTGTGACAATCAAAATAAAACAATAAATGACACTTGCTCCGGAAGGAGTATCTGGTATGAGTTCCTCTTATGGTACATTGTTGTGACGACTTTGCTCTCACTAGCTATGTATTACGTGTTGCATATTTTTCAATAGAAATTACTTTGGAGGGGGTCCTCTGCGAGAAATTATCTGTTGGATTAGGGATCTTTTGGTGAAAGGATGTAAATACTAATGATTTTGGAAAGGGACCACACCTCATAACAGATATCCCAAAGGATATGGATTTCATTTGAATTTGGTGCTTTCTAAGAATCTAAGCTTCATGAAGACAACTTTGCCTATCATCATTTCCAAGTTACTTGCAGCGACTTCTGATCCTGAAGTAATATCCTCCATGGGCAAATCTTCTCCTTTTACTCTTCGATTTAGAGCCATTGTTGAAACCTAAATGCCTCCAACCAACCAACCCTCTGATAATTAGTTGGGCAGCTAATATACCATACAAAAGTCCCCTTTGTGAGCAACCTATATTGGAACACTTCCCACTTTCACCAATAATTTGTGTTCAGAAAAGTCTGTCTTCTATTTGTGGGATTTATTGTTTATGTTTCTGTTGACAGATTTTCGTGATACATGGGCATTCTTGGATGCACGAACAAAAGATGCATTTGATCTGAAGAAGACTGCTCAAGAGGTATTTTGCTTCTAATGTTATTGTATGTAGACCCCCTGAAATGAATTGGACTAGGATTTCAGAGTATTGGTTCTGACTTCCTGAGGATAATCTATGAACAATTTTGCAGGCACAACGTTTGGCTGAAGCAGTTGGTGCAGG</genome_strand>
        <mrna_strand>ATTCATACTACACTCTCTCTATTGAAGCTCCAAAATAGTTGCGAACAAATCGTTGACAATGTATCGATCGGCGGCAAAGAGGTTACTACCGGCGTTTTACCGGCGACGCCAGGATGCAGTATCATGCATTCGAACCCTAGCAGCAGACTACCCCACTCGATTCATGACTTCAGCTGCCACCGGAAATATTCCTGATCAGAACCCTATTCCGGTTAACCCTATTCTTCCTAGCTCTAATCCGACCGACTCTACCGCATCATCATCTTGGAAGGAAGAAGAAAGGACACGTTTTCAGGATACTGATGCAAAATCTAGCTCGAGAACAAAGCGGCCTAAAGCGCATTACAAGGACGAAGAGGCCCTTGTACTCAGTGCCTCTCTTTCTCATGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGGCTAGGATGGACTGAAACCGCCATGATTGCAGGTGCAAGGGATGTCGGAGTGTCACCTTCCATTGTTGGATCATTTCCTCGGAAAGAAGCTGCACTAGTGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTTATGGACGAGTGTCTGGAAAGACTCATTGATATCATTGAATCAAGGAACGATCTGAATAACTTAATACCTAGTGAGCGGATAGCAAAGCTTGTACGAATTCGCTTGGAAATGCAAACCCCTTACATATCAAAATGGCCACAAGCTCTCAGTATACAG.....................................................................................................GCTCAACCCTTGAATGTTCCAACAAGCTTCAAGCAGCGTGCAATGCTGGTTGATGAGATATGGCATGCTGTTGGTGATGATGCCAACGAAATTGATTGG--TGTGAAGCGCACTGTTCTAGGTGGAATATACTCCACGACAGAACTATACATGTTGACAGATAGCTCTCCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTCGTGATACATGGGCATTCTTGGATGCACGAACAAAAGATGCATTTGATCTGAAGAAGACTGCTCAAGAG.............................................................................................................GCACAACGTTTGGCTGAACCATTTGGTGCAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E422961" ref_strand="+" ref_description="SGN-E422961 [STM-41-E6]">
      <seq>cggttactgccggcgttttaccgccggcaccaggatgcaatatcaagtattcgaaccctagcagcagactaccccactcgatttatgacttcagctgccaccggaaatattcctgatcagaaccctattccgactagctctaatccgaccgactctaccgcatcatcatcttggaaggaagaagaaaggacacgttaccaggaaactgatgaaaaatctagctcgagaacaaagcggcctaaagcgcattacaaggacgaagaggcccgtgtactcagtgcctctctctctcatgtggtgcaagggatgtcggagtgtcaccttccattgttggatcatttcctcggaaagaagctgcactagtggagtattttatggatgagtgtctggaaagactcattgatatcattgaatcaaggaacgatctgaaaaacttgatacctagtgagcgggtagcaaagcttgtaagaattcgcttggaaatgcaaaccccttacatatcaaaatggcgacaagctctcagtatacaggctcaacccttgaatgttccaacaagcttcaagcagcgtgccatgctggttgatgagatatggcatgctggttggtgatgatgcccacgaaattgattggtatgtgaagcgcactgttctaggtggaatatactccacgacagaacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="121342" stop="116991"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121043" g_stop="120732" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="297" r_length="297" r_score="0.904"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120731" i_stop="119906" i_length="826">
            <donor d_prob="0.993" d_score="0.96"/>
            <acceptor a_prob="0.105" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="119905" g_stop="119835" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="298" r_stop="368" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="119834" i_stop="117701" i_length="2134">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.904" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="117700" g_stop="117539" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="369" r_stop="530" r_length="162" r_score="0.963"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="117538" i_stop="117438" i_length="101">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.673" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="117437" g_stop="117291" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="531" r_stop="678" r_length="148" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E422961" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>692</cumulative_length_of_scored_exons>
        <coverage percentage="1.021" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E422961" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121043" e_stop="120732"/>
          <exon e_start="119905" e_stop="119835"/>
          <exon e_start="117700" e_stop="117539"/>
          <exon e_start="117437" e_stop="117291"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGTTACTACCGGCGTTTTACCGGCGACGCCAGGATGCAGTATCATGCATTCGAACCCTAGCAGCAGACTACCCCACTCGATTCATGACTTCAGCTGCCACCGGAAATATTCCTGATCAGAACCCTATTCCGGTTAACCCTATTCTTCCTAGCTCTAATCCGACCGACTCTACCGCATCATCATCTTGGAAGGAAGAAGAAAGGACACGTTTTCAGGATACTGATGCAAAATCTAGCTCGAGAACAAAGCGGCCTAAAGCGCATTACAAGGACGAAGAGGCCCTTGTACTCAGTGCCTCTCTTTCTCATGTGGTTTGTTACATTTACTTTCTCTTTCGTTTCTTGTGCAGATATGAAATTTTGGATTTATATGTGTAGATTAATGTGTTGTGTCTTATGTGTTTTTAATTGAATTTATTTGTTGACTTGGTGAAATTGGCTGCATAAATTGATTACTTGACCTTCGAATTTGTTGAACCTGCTGCTGTCTTTCTCCCCGAAGAAATGGGATTGGGACCTTTATGCATTGTGATTCTATTGCCAAACCTCTTTGGCGTAGAAGTAGTTTCTGACAAGTACATTCAGTAATCCAATTGGAAAAGATAAAAAGATAAATTATGAAAAAGTAGTTCCTTTGAAAGTTAATAGAGCTTTCCTGATGAGAGGAAGATAATGCCTTGTAATATAAGGTTCATCTTATATACATACCCAAAGGAAAGTTTTACTTTGGTATGTGGGTATGGAGGAAGATGCTTTCCTATATTATTTTTAGAAAAGATATTTTTACTCTGAGAAATCATTTTCTTGATGGTTTTCCTCTGTTTAATTGGGTATGAAGCCGGTGACTGCCAAGTGTATGGTAAAGAAGAGTATTTGTAAAGGGAATCGACTTCCCAACAAGTGAAGGAAGTCATTGCTCCCTTTTGGTGAAAATATATTCATTGGAGATAACATTTTTCACAATTAGGGCAACCAAACACTGAAAGGATTTCGTCAAGGAAAATTCTTTCCTAAGAACATATTCTGACATACAAACACATATTTTCTATCCCTTCATATATATATCAGGCTTGTAATTGGTGCTGGGTAACTTGTTTGCAGATTCGGCTAGGATGGACTGAAACCGCCATGATTGCAGGTGCAAGGGATGTCGGAGTGTCACCTTCCATTGTTGGATCATTTCCTCGGAAAGAAGCTGCACTAGTGGAGGTAAATGAGGGTTCACCTACATTTACTCATAGTTCTGGATTTTTTAATGTGACTGGACTTTGTGGGCATTATAGGGCTCCAACATATTTGGTTTTGCTAAAAATGTTGATATAAGATTATCTGCCTCTCAGTTTTGTTTATCTTTTATTTTGGTTTTCCTATTTATCTATCTGCACTTAATTTGTCTGGTACGAGTATAACTCAAAGGAACTCCATTGAGGTAATATGCAAAGTCAACAACGTAATAGTTGTGTTTCCTTAATAAAAGGATTTTTAATGATTTTGGTAAAGTAAAAGGATTATTAATGATATATCCTTGACACCTTATAAGTTATAAGTATATAGTTTATGTAGCCATTCAAATGACTACACTTGGATCGAGGTTTTCCAAAACGCCCTCTTCCTCGCCGATTCTCCATAGACTGGTATGTACGCTTTTCTGTGGTTTGAGATGCGAGAATAGAGGAGTCAACAATGAGTGATGAAACTTCTTTGTGACTGGGAGGTGTAGCAAGACGAAATAGACGACAGAAGAATTCATCAATTGAGGGAACTGTAGGATTGGCTAGAATCTGGTCACATACAGAGCTATGGTCTGTAGGAAGTCCAACAAGTGTAAGAATTAGAAACAATGTCTGCCTTTGTTCTTGTTGCTTTTCCACGATTGTCGTGATACGCATCAATGTTTCAAATTCCTCCATGACTGCCTGTACTTGTCCGAAGTAAGTAAACATATCGGATTCTTGTTTCTTTAAGTTGGTCATCCGAGATATCACATCATAGTATCGAGATATGTCGTTAGTGTATAAAGCACGTGCCTTTTCCCAAACTAAATAACATGTCTGGAATTGGCGAAACAAGGGCATCAACTTAGAATCAACAGAGCGCCAAAGGAGACTACATAATTGGGCATCCACTTTCTCCCATTGTGCTTCGGCTTTTGCACCATGGTCATTAGACTTTGTCTTTTCATCTACAATACAAGCATTGTTTGTTAAGTGATCTTGAACACCTTGACCCTTGCACCACAACTCAACTGAAGAAGCCCAAGCTAAATAGTTTGAACTTCAGATTAATGGTTATGAAGTGATTGTAGGGCTTGAACTTCCAATCCCTGTATTTTTGGAGCCAAAAACATCACACCCGGAAGACATTTTTTTGAAATTTGGCTTGAAGAGAGTAAGAAACTTGTTGGAAACTGCCGGAATCTACCTATAGTAGCCTAAAAGTTCTGATATCGCTGGAAACTTGCCGAAAACTGCCTGAAAATCACCGGAACCCTAATTCCGGTGATCGGATCTAGAGAAAACTGTCCATGTTCTGGTCGGAAATACTGGGCGACCCAACGGAAGAAAATTGCTCGAAAAAAAATTGACAGGAGCAGCACTCACGTGCCGCGTGCGTGAACAAATCTTGCCGGAAAATTTTCACCTTCGATCTGCGCGTGGGGGTTATTTTCCGGTGGGTCTGGCTGGGGGTCGTCTGAGCTTCCCGAGCCTCGTGACAGTGTTGTCTTTTGCACAACACCTTCAAAATAAACGATGACACAAATCAGTCCACCGTCGTCACCGAAATTTGACACCGATGACTTGAAGTGCTCACCAATGCTCTTATACCATGTGAGATATATATGGCAAGAATATTATTCAATTGTGTATATACATTGTTACATTAAGACCCTATTTATAGACACTACATTGGAACCCTTTTCCGACTAGGATTCCTATTCCTATTCTTCTTACTATTCCTATTCTAAGTAAGAAATACTTACTCCTATTCTAACAATTATGTGCTCTCTTTGATGACCATACCAAATAACGAGCCAAATCCTAAGATATTGCTGATTTGTTTAGCATTTGCGAGAAGGCCTAAAAAGCTAGATGTTTTGGTCTCTGACTTTGTTTTAATGCACATTAATTACCATTGGCAAGGCTCTTAATGCTCATTCAGCTGTCAAGCTTCGTCTTTTCTTGAATTATATACAACATTGCTTTCAGACTTATACTGGCTTCTTACATGTTTATTATTTATAGTTTAGCTGATCTAGTTAATGCTTGTATTTTCTTTCTTTTTTCGGCAAATCAATAAGTAAATCCTCTGTTGATCTTTTATATTGAACATCTTTTTTTCTCAGTATTTTATGGACGAGTGTCTGGAAAGACTCATTGATATCATTGAATCAAGGAACGATCTGAATAACTTAATACCTAGTGAGCGGATAGCAAAGCTTGTACGAATTCGCTTGGAAATGCAAACCCCTTACATATCAAAATGGCCACAAGCTCTCAGTATACAGGTACTTATCTCCTTAAAGTTTACATCTTTTAAGGCTCCTTTCTTGTGTGGTGGGCCTGTATAATGAGCAGAAGTGTGTCAGATAACAACTACTGATTGTAGGCTCAACCCTTGAATGTTCCAACAAGCTTCAAGCAGCGTGCAATGCTGGTTGATGAGATATGGCATGCT-GTTGGTGATGATGCCAACGAAATTGATTGGTATGTGAAGCGCACTGTTCTAGGTGGAATATACTCCACGACAGAACTA</genome_strand>
        <mrna_strand>CGGTTACTGCCGGCGTTTTACCGCCGGCACCAGGATGCAATATCAAGTATTCGAACCCTAGCAGCAGACTACCCCACTCGATTTATGACTTCAGCTGCCACCGGAAATATTCCTGATCAGAACCCTATTCC-G---A--CT---------AGCTCTAATCCGACCGACTCTACCGCATCATCATCTTGGAAGGAAGAAGAAAGGACACGTTACCAGGAAACTGATGAAAAATCTAGCTCGAGAACAAAGCGGCCTAAAGCGCATTACAAGGACGAAGAGGCCCGTGTACTCAGTGCCTCTCTCTCTCATGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAAGGGATGTCGGAGTGTCACCTTCCATTGTTGGATCATTTCCTCGGAAAGAAGCTGCACTAGTGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTTATGGATGAGTGTCTGGAAAGACTCATTGATATCATTGAATCAAGGAACGATCTGAAAAACTTGATACCTAGTGAGCGGGTAGCAAAGCTTGTAAGAATTCGCTTGGAAATGCAAACCCCTTACATATCAAAATGGCGACAAGCTCTCAGTATACAG.....................................................................................................GCTCAACCCTTGAATGTTCCAACAAGCTTCAAGCAGCGTGCCATGCTGGTTGATGAGATATGGCATGCTGGTTGGTGATGATGCCCACGAAATTGATTGGTATGTGAAGCGCACTGTTCTAGGTGGAATATACTCCACGACAGAACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E604391" ref_strand="+" ref_description="SGN-E604391 [74526]">
      <seq>cggcgttttactgccggcaccaggatgcaatatcaagtattcgaaccctagcagcagactaccccactcgatttatgacttcagctgccaccggaaatattcctgatcagaaccctattccgactagctctaagtccgaccgactctaccgcatcatcatcttggaaggaagaagaaaggacacgttaccaggaaactgatgaaaaatctagctcgagaacaaagcggcctaaagcgcattacaaggacgaagaggcccgtgtactcagtgcctctctctctcatgtgcttcggctaggatggactgaaacagccatgattacaggtgcaagggatgtcggagtgtcaccttccattgttggatcatttcctcggaaagaagctgcactagtggagtattttatggactgagtgtctggaaagactcattgatatcattgaatcacggaacgatctgaaaaacttgatacctagtgagcgggtagcaaagcttgtccgaattcgcttggaaatgcaaaccccttacatatcaaaatggccgcaagctctcagtatacaggctcaacccttgagtgttccaacaagcttcaagcagcgtgccatgctggttgatgagatatggcatgctgtaggtgatgatgccaaggaaatcgattggtatgtgaagcgcactgttctaggtggaatatactcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="121333" stop="117003"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121033" g_stop="120732" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="288" r_length="288" r_score="0.901"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120731" i_stop="119943" i_length="789">
            <donor d_prob="0.993" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="119942" g_stop="119835" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="396" r_length="108" r_score="0.972"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="119834" i_stop="117701" i_length="2134">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.904" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="117700" g_stop="117539" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="397" r_stop="559" r_length="163" r_score="0.951"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="117538" i_stop="117438" i_length="101">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.673" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="117437" g_stop="117303" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="560" r_stop="694" r_length="135" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E604391" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>707</cumulative_length_of_scored_exons>
        <coverage percentage="1.019" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E604391" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121033" e_stop="120732"/>
          <exon e_start="119942" e_stop="119835"/>
          <exon e_start="117700" e_stop="117539"/>
          <exon e_start="117437" e_stop="117303"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGCGTTTTACCGGCGACGCCAGGATGCAGTATCATGCATTCGAACCCTAGCAGCAGACTACCCCACTCGATTCATGACTTCAGCTGCCACCGGAAATATTCCTGATCAGAACCCTATTCCGGTTAACCCTATTCTTCCTAGCTCTAATCCGACCGACTCTACCGCATCATCATCTTGGAAGGAAGAAGAAAGGACACGTTTTCAGGATACTGATGCAAAATCTAGCTCGAGAACAAAGCGGCCTAAAGCGCATTACAAGGACGAAGAGGCCCTTGTACTCAGTGCCTCTCTTTCTCATGTGGTTTGTTACATTTACTTTCTCTTTCGTTTCTTGTGCAGATATGAAATTTTGGATTTATATGTGTAGATTAATGTGTTGTGTCTTATGTGTTTTTAATTGAATTTATTTGTTGACTTGGTGAAATTGGCTGCATAAATTGATTACTTGACCTTCGAATTTGTTGAACCTGCTGCTGTCTTTCTCCCCGAAGAAATGGGATTGGGACCTTTATGCATTGTGATTCTATTGCCAAACCTCTTTGGCGTAGAAGTAGTTTCTGACAAGTACATTCAGTAATCCAATTGGAAAAGATAAAAAGATAAATTATGAAAAAGTAGTTCCTTTGAAAGTTAATAGAGCTTTCCTGATGAGAGGAAGATAATGCCTTGTAATATAAGGTTCATCTTATATACATACCCAAAGGAAAGTTTTACTTTGGTATGTGGGTATGGAGGAAGATGCTTTCCTATATTATTTTTAGAAAAGATATTTTTACTCTGAGAAATCATTTTCTTGATGGTTTTCCTCTGTTTAATTGGGTATGAAGCCGGTGACTGCCAAGTGTATGGTAAAGAAGAGTATTTGTAAAGGGAATCGACTTCCCAACAAGTGAAGGAAGTCATTGCTCCCTTTTGGTGAAAATATATTCATTGGAGATAACATTTTTCACAATTAGGGCAACCAAACACTGAAAGGATTTCGTCAAGGAAAATTCTTTCCTAAGAACATATTCTGACATACAAACACATATTTTCTATCCCTTCATATATATATCAGGCTTGTAATTGGTGCTGGGTAACTTGTTTGCAGATTCGGCTAGGATGGACTGAAACCGCCATGATTGCAGGTGCAAGGGATGTCGGAGTGTCACCTTCCATTGTTGGATCATTTCCTCGGAAAGAAGCTGCACTAGTGGAGGTAAATGAGGGTTCACCTACATTTACTCATAGTTCTGGATTTTTTAATGTGACTGGACTTTGTGGGCATTATAGGGCTCCAACATATTTGGTTTTGCTAAAAATGTTGATATAAGATTATCTGCCTCTCAGTTTTGTTTATCTTTTATTTTGGTTTTCCTATTTATCTATCTGCACTTAATTTGTCTGGTACGAGTATAACTCAAAGGAACTCCATTGAGGTAATATGCAAAGTCAACAACGTAATAGTTGTGTTTCCTTAATAAAAGGATTTTTAATGATTTTGGTAAAGTAAAAGGATTATTAATGATATATCCTTGACACCTTATAAGTTATAAGTATATAGTTTATGTAGCCATTCAAATGACTACACTTGGATCGAGGTTTTCCAAAACGCCCTCTTCCTCGCCGATTCTCCATAGACTGGTATGTACGCTTTTCTGTGGTTTGAGATGCGAGAATAGAGGAGTCAACAATGAGTGATGAAACTTCTTTGTGACTGGGAGGTGTAGCAAGACGAAATAGACGACAGAAGAATTCATCAATTGAGGGAACTGTAGGATTGGCTAGAATCTGGTCACATACAGAGCTATGGTCTGTAGGAAGTCCAACAAGTGTAAGAATTAGAAACAATGTCTGCCTTTGTTCTTGTTGCTTTTCCACGATTGTCGTGATACGCATCAATGTTTCAAATTCCTCCATGACTGCCTGTACTTGTCCGAAGTAAGTAAACATATCGGATTCTTGTTTCTTTAAGTTGGTCATCCGAGATATCACATCATAGTATCGAGATATGTCGTTAGTGTATAAAGCACGTGCCTTTTCCCAAACTAAATAACATGTCTGGAATTGGCGAAACAAGGGCATCAACTTAGAATCAACAGAGCGCCAAAGGAGACTACATAATTGGGCATCCACTTTCTCCCATTGTGCTTCGGCTTTTGCACCATGGTCATTAGACTTTGTCTTTTCATCTACAATACAAGCATTGTTTGTTAAGTGATCTTGAACACCTTGACCCTTGCACCACAACTCAACTGAAGAAGCCCAAGCTAAATAGTTTGAACTTCAGATTAATGGTTATGAAGTGATTGTAGGGCTTGAACTTCCAATCCCTGTATTTTTGGAGCCAAAAACATCACACCCGGAAGACATTTTTTTGAAATTTGGCTTGAAGAGAGTAAGAAACTTGTTGGAAACTGCCGGAATCTACCTATAGTAGCCTAAAAGTTCTGATATCGCTGGAAACTTGCCGAAAACTGCCTGAAAATCACCGGAACCCTAATTCCGGTGATCGGATCTAGAGAAAACTGTCCATGTTCTGGTCGGAAATACTGGGCGACCCAACGGAAGAAAATTGCTCGAAAAAAAATTGACAGGAGCAGCACTCACGTGCCGCGTGCGTGAACAAATCTTGCCGGAAAATTTTCACCTTCGATCTGCGCGTGGGGGTTATTTTCCGGTGGGTCTGGCTGGGGGTCGTCTGAGCTTCCCGAGCCTCGTGACAGTGTTGTCTTTTGCACAACACCTTCAAAATAAACGATGACACAAATCAGTCCACCGTCGTCACCGAAATTTGACACCGATGACTTGAAGTGCTCACCAATGCTCTTATACCATGTGAGATATATATGGCAAGAATATTATTCAATTGTGTATATACATTGTTACATTAAGACCCTATTTATAGACACTACATTGGAACCCTTTTCCGACTAGGATTCCTATTCCTATTCTTCTTACTATTCCTATTCTAAGTAAGAAATACTTACTCCTATTCTAACAATTATGTGCTCTCTTTGATGACCATACCAAATAACGAGCCAAATCCTAAGATATTGCTGATTTGTTTAGCATTTGCGAGAAGGCCTAAAAAGCTAGATGTTTTGGTCTCTGACTTTGTTTTAATGCACATTAATTACCATTGGCAAGGCTCTTAATGCTCATTCAGCTGTCAAGCTTCGTCTTTTCTTGAATTATATACAACATTGCTTTCAGACTTATACTGGCTTCTTACATGTTTATTATTTATAGTTTAGCTGATCTAGTTAATGCTTGTATTTTCTTTCTTTTTTCGGCAAATCAATAAGTAAATCCTCTGTTGATCTTTTATATTGAACATCTTTTTTTCTCAGTATTTTATGGAC-GAGTGTCTGGAAAGACTCATTGATATCATTGAATCAAGGAACGATCTGAATAACTTAATACCTAGTGAGCGGATAGCAAAGCTTGTACGAATTCGCTTGGAAATGCAAACCCCTTACATATCAAAATGGCCACAAGCTCTCAGTATACAGGTACTTATCTCCTTAAAGTTTACATCTTTTAAGGCTCCTTTCTTGTGTGGTGGGCCTGTATAATGAGCAGAAGTGTGTCAGATAACAACTACTGATTGTAGGCTCAACCCTTGAATGTTCCAACAAGCTTCAAGCAGCGTGCAATGCTGGTTGATGAGATATGGCATGCTGTTGGTGATGATGCCAACGAAATTGATTGGTATGTGAAGCGCACTGTTCTAGGTGGAATATACTCC</genome_strand>
        <mrna_strand>CGGCGTTTTACTGCCGGCACCAGGATGCAATATCAAGTATTCGAACCCTAGCAGCAGACTACCCCACTCGATTTATGACTTCAGCTGCCACCGGAAATATTCCTGATCAGAACCCTATTCC-G---A--CTA-GC-T-CTA-----AGTCCGACCGACTCTACCGCATCATCATCTTGGAAGGAAGAAGAAAGGACACGTTACCAGGAAACTGATGAAAAATCTAGCTCGAGAACAAAGCGGCCTAAAGCGCATTACAAGGACGAAGAGGCCCGTGTACTCAGTGCCTCTCTCTCTCATGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGGCTAGGATGGACTGAAACAGCCATGATTACAGGTGCAAGGGATGTCGGAGTGTCACCTTCCATTGTTGGATCATTTCCTCGGAAAGAAGCTGCACTAGTGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTTATGGACTGAGTGTCTGGAAAGACTCATTGATATCATTGAATCACGGAACGATCTGAAAAACTTGATACCTAGTGAGCGGGTAGCAAAGCTTGTCCGAATTCGCTTGGAAATGCAAACCCCTTACATATCAAAATGGCCGCAAGCTCTCAGTATACAG.....................................................................................................GCTCAACCCTTGAGTGTTCCAACAAGCTTCAAGCAGCGTGCCATGCTGGTTGATGAGATATGGCATGCTGTAGGTGATGATGCCAAGGAAATCGATTGGTATGTGAAGCGCACTGTTCTAGGTGGAATATACTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E346346" ref_strand="+" ref_description="SGN-E346346 [cTOF-23-A17]">
      <seq>ccgtatctctacgtggagccttttcctgatattcatactacactctctctattgaagctccaaaatagttgcgaacaaatcgttgacaatgtatcgatcggcggcaaagaggttactaccggcgttttaccggcgacgccaggatgcagtatcatgcattcgaaccctagcagcagactaccccactcgattcatgacttcagctgccaccggaaatattcctgatcagaaccctattccggttaaccctattcttcctagctctaatccgaccgactctaccgcatcatcatcttggaaggaagaagaaaggacacgttttcaggatactgatgcaaaatctagctcgagaacaaagcggcctaaagcgcattacaaggacgaagaggcccttgtactcagtgcctctctttctcatgtgattcggctaggatggactgaaaccgccatgattgcaggtgcaagggatgtcggagtgtcaccttccattgttggatcatttcctcggaaagaagctgcactagtggagtattttatggacgagtgtctggaaagactcattgatatcattgaatcaaggaacgatctgaataacttaatacctagtgagcggatagcaaagcttgtacgaattcgcttggaaatgcaaaccccttacatatcaaaatggccacaagctctcagtatacaggctcaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="121452" stop="117238"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121152" g_stop="120732" g_length="421"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="421" r_length="421" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120731" i_stop="119943" i_length="789">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="119942" g_stop="119835" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="422" r_stop="529" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="119834" i_stop="117701" i_length="2134">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.904" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="117700" g_stop="117539" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="530" r_stop="691" r_length="162" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="117538" i_stop="117438" i_length="101">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.673" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="117437" g_stop="117431" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="692" r_stop="698" r_length="7" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E346346" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>698</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E346346" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121152" e_stop="120732"/>
          <exon e_start="119942" e_stop="119835"/>
          <exon e_start="117700" e_stop="117539"/>
          <exon e_start="117437" e_stop="117431"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGTATCTCTACGTGGAGCCTTTTCCTGATATTCATACTACACTCTCTCTATTGAAGCTCCAAAATAGTTGCGAACAAATCGTTGACAATGTATCGATCGGCGGCAAAGAGGTTACTACCGGCGTTTTACCGGCGACGCCAGGATGCAGTATCATGCATTCGAACCCTAGCAGCAGACTACCCCACTCGATTCATGACTTCAGCTGCCACCGGAAATATTCCTGATCAGAACCCTATTCCGGTTAACCCTATTCTTCCTAGCTCTAATCCGACCGACTCTACCGCATCATCATCTTGGAAGGAAGAAGAAAGGACACGTTTTCAGGATACTGATGCAAAATCTAGCTCGAGAACAAAGCGGCCTAAAGCGCATTACAAGGACGAAGAGGCCCTTGTACTCAGTGCCTCTCTTTCTCATGTGGTTTGTTACATTTACTTTCTCTTTCGTTTCTTGTGCAGATATGAAATTTTGGATTTATATGTGTAGATTAATGTGTTGTGTCTTATGTGTTTTTAATTGAATTTATTTGTTGACTTGGTGAAATTGGCTGCATAAATTGATTACTTGACCTTCGAATTTGTTGAACCTGCTGCTGTCTTTCTCCCCGAAGAAATGGGATTGGGACCTTTATGCATTGTGATTCTATTGCCAAACCTCTTTGGCGTAGAAGTAGTTTCTGACAAGTACATTCAGTAATCCAATTGGAAAAGATAAAAAGATAAATTATGAAAAAGTAGTTCCTTTGAAAGTTAATAGAGCTTTCCTGATGAGAGGAAGATAATGCCTTGTAATATAAGGTTCATCTTATATACATACCCAAAGGAAAGTTTTACTTTGGTATGTGGGTATGGAGGAAGATGCTTTCCTATATTATTTTTAGAAAAGATATTTTTACTCTGAGAAATCATTTTCTTGATGGTTTTCCTCTGTTTAATTGGGTATGAAGCCGGTGACTGCCAAGTGTATGGTAAAGAAGAGTATTTGTAAAGGGAATCGACTTCCCAACAAGTGAAGGAAGTCATTGCTCCCTTTTGGTGAAAATATATTCATTGGAGATAACATTTTTCACAATTAGGGCAACCAAACACTGAAAGGATTTCGTCAAGGAAAATTCTTTCCTAAGAACATATTCTGACATACAAACACATATTTTCTATCCCTTCATATATATATCAGGCTTGTAATTGGTGCTGGGTAACTTGTTTGCAGATTCGGCTAGGATGGACTGAAACCGCCATGATTGCAGGTGCAAGGGATGTCGGAGTGTCACCTTCCATTGTTGGATCATTTCCTCGGAAAGAAGCTGCACTAGTGGAGGTAAATGAGGGTTCACCTACATTTACTCATAGTTCTGGATTTTTTAATGTGACTGGACTTTGTGGGCATTATAGGGCTCCAACATATTTGGTTTTGCTAAAAATGTTGATATAAGATTATCTGCCTCTCAGTTTTGTTTATCTTTTATTTTGGTTTTCCTATTTATCTATCTGCACTTAATTTGTCTGGTACGAGTATAACTCAAAGGAACTCCATTGAGGTAATATGCAAAGTCAACAACGTAATAGTTGTGTTTCCTTAATAAAAGGATTTTTAATGATTTTGGTAAAGTAAAAGGATTATTAATGATATATCCTTGACACCTTATAAGTTATAAGTATATAGTTTATGTAGCCATTCAAATGACTACACTTGGATCGAGGTTTTCCAAAACGCCCTCTTCCTCGCCGATTCTCCATAGACTGGTATGTACGCTTTTCTGTGGTTTGAGATGCGAGAATAGAGGAGTCAACAATGAGTGATGAAACTTCTTTGTGACTGGGAGGTGTAGCAAGACGAAATAGACGACAGAAGAATTCATCAATTGAGGGAACTGTAGGATTGGCTAGAATCTGGTCACATACAGAGCTATGGTCTGTAGGAAGTCCAACAAGTGTAAGAATTAGAAACAATGTCTGCCTTTGTTCTTGTTGCTTTTCCACGATTGTCGTGATACGCATCAATGTTTCAAATTCCTCCATGACTGCCTGTACTTGTCCGAAGTAAGTAAACATATCGGATTCTTGTTTCTTTAAGTTGGTCATCCGAGATATCACATCATAGTATCGAGATATGTCGTTAGTGTATAAAGCACGTGCCTTTTCCCAAACTAAATAACATGTCTGGAATTGGCGAAACAAGGGCATCAACTTAGAATCAACAGAGCGCCAAAGGAGACTACATAATTGGGCATCCACTTTCTCCCATTGTGCTTCGGCTTTTGCACCATGGTCATTAGACTTTGTCTTTTCATCTACAATACAAGCATTGTTTGTTAAGTGATCTTGAACACCTTGACCCTTGCACCACAACTCAACTGAAGAAGCCCAAGCTAAATAGTTTGAACTTCAGATTAATGGTTATGAAGTGATTGTAGGGCTTGAACTTCCAATCCCTGTATTTTTGGAGCCAAAAACATCACACCCGGAAGACATTTTTTTGAAATTTGGCTTGAAGAGAGTAAGAAACTTGTTGGAAACTGCCGGAATCTACCTATAGTAGCCTAAAAGTTCTGATATCGCTGGAAACTTGCCGAAAACTGCCTGAAAATCACCGGAACCCTAATTCCGGTGATCGGATCTAGAGAAAACTGTCCATGTTCTGGTCGGAAATACTGGGCGACCCAACGGAAGAAAATTGCTCGAAAAAAAATTGACAGGAGCAGCACTCACGTGCCGCGTGCGTGAACAAATCTTGCCGGAAAATTTTCACCTTCGATCTGCGCGTGGGGGTTATTTTCCGGTGGGTCTGGCTGGGGGTCGTCTGAGCTTCCCGAGCCTCGTGACAGTGTTGTCTTTTGCACAACACCTTCAAAATAAACGATGACACAAATCAGTCCACCGTCGTCACCGAAATTTGACACCGATGACTTGAAGTGCTCACCAATGCTCTTATACCATGTGAGATATATATGGCAAGAATATTATTCAATTGTGTATATACATTGTTACATTAAGACCCTATTTATAGACACTACATTGGAACCCTTTTCCGACTAGGATTCCTATTCCTATTCTTCTTACTATTCCTATTCTAAGTAAGAAATACTTACTCCTATTCTAACAATTATGTGCTCTCTTTGATGACCATACCAAATAACGAGCCAAATCCTAAGATATTGCTGATTTGTTTAGCATTTGCGAGAAGGCCTAAAAAGCTAGATGTTTTGGTCTCTGACTTTGTTTTAATGCACATTAATTACCATTGGCAAGGCTCTTAATGCTCATTCAGCTGTCAAGCTTCGTCTTTTCTTGAATTATATACAACATTGCTTTCAGACTTATACTGGCTTCTTACATGTTTATTATTTATAGTTTAGCTGATCTAGTTAATGCTTGTATTTTCTTTCTTTTTTCGGCAAATCAATAAGTAAATCCTCTGTTGATCTTTTATATTGAACATCTTTTTTTCTCAGTATTTTATGGACGAGTGTCTGGAAAGACTCATTGATATCATTGAATCAAGGAACGATCTGAATAACTTAATACCTAGTGAGCGGATAGCAAAGCTTGTACGAATTCGCTTGGAAATGCAAACCCCTTACATATCAAAATGGCCACAAGCTCTCAGTATACAGGTACTTATCTCCTTAAAGTTTACATCTTTTAAGGCTCCTTTCTTGTGTGGTGGGCCTGTATAATGAGCAGAAGTGTGTCAGATAACAACTACTGATTGTAGGCTCAAC</genome_strand>
        <mrna_strand>CCGTATCTCTACGTGGAGCCTTTTCCTGATATTCATACTACACTCTCTCTATTGAAGCTCCAAAATAGTTGCGAACAAATCGTTGACAATGTATCGATCGGCGGCAAAGAGGTTACTACCGGCGTTTTACCGGCGACGCCAGGATGCAGTATCATGCATTCGAACCCTAGCAGCAGACTACCCCACTCGATTCATGACTTCAGCTGCCACCGGAAATATTCCTGATCAGAACCCTATTCCGGTTAACCCTATTCTTCCTAGCTCTAATCCGACCGACTCTACCGCATCATCATCTTGGAAGGAAGAAGAAAGGACACGTTTTCAGGATACTGATGCAAAATCTAGCTCGAGAACAAAGCGGCCTAAAGCGCATTACAAGGACGAAGAGGCCCTTGTACTCAGTGCCTCTCTTTCTCATGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGGCTAGGATGGACTGAAACCGCCATGATTGCAGGTGCAAGGGATGTCGGAGTGTCACCTTCCATTGTTGGATCATTTCCTCGGAAAGAAGCTGCACTAGTGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTTATGGACGAGTGTCTGGAAAGACTCATTGATATCATTGAATCAAGGAACGATCTGAATAACTTAATACCTAGTGAGCGGATAGCAAAGCTTGTACGAATTCGCTTGGAAATGCAAACCCCTTACATATCAAAATGGCCACAAGCTCTCAGTATACAG.....................................................................................................GCTCAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E328073" ref_strand="+" ref_description="SGN-E328073 [cTOC-22-B21]">
      <seq>tgatattcatactacactctctctattgaagctccaaaatagttgcgaacaaatcgttgacaatgtatcgatcggcggcaaagaggttactaccggcgttttaccggcgacgccaggatgcagtatcatgcattcgaaccctagcagcagactaccccactcgattcatgacttcagctgccaccggaaatattcctgatcagaaccctattccggttaaccctattcttcctagctctaatccgaccgactctaccgcatcatcatcttggaaggaagaagaaaggacacgttttcaggatactgatgcaaaatctagctcgagaacaaagcggcctaaagcgcattacaaggacgaagaggcccttgtactcagtgcctctctttctcatgtgattcggctaggatggactgaaaccgccatgattgcaggtgcaagggatgtcggagtgtcaccttccattgttggatcatttcctcggaaagaagctgcactagtggagtattttatggacgagtgtctggaaagactcattgatatcattgaatcaaggaacgatctgaataacttaatacctagtgagcggatagcaaagcttgtacgaattcgcttggaaatgcaaaccccttacatatcaaaatggccacaagctctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="121426" stop="117248"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121126" g_stop="120732" g_length="395"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="395" r_length="395" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120731" i_stop="119943" i_length="789">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="119942" g_stop="119835" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="396" r_stop="503" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="119834" i_stop="117701" i_length="2134">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.904" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="117700" g_stop="117548" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="504" r_stop="656" r_length="153" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E328073" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>656</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E328073" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121126" e_stop="120732"/>
          <exon e_start="119942" e_stop="119835"/>
          <exon e_start="117700" e_stop="117548"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATATTCATACTACACTCTCTCTATTGAAGCTCCAAAATAGTTGCGAACAAATCGTTGACAATGTATCGATCGGCGGCAAAGAGGTTACTACCGGCGTTTTACCGGCGACGCCAGGATGCAGTATCATGCATTCGAACCCTAGCAGCAGACTACCCCACTCGATTCATGACTTCAGCTGCCACCGGAAATATTCCTGATCAGAACCCTATTCCGGTTAACCCTATTCTTCCTAGCTCTAATCCGACCGACTCTACCGCATCATCATCTTGGAAGGAAGAAGAAAGGACACGTTTTCAGGATACTGATGCAAAATCTAGCTCGAGAACAAAGCGGCCTAAAGCGCATTACAAGGACGAAGAGGCCCTTGTACTCAGTGCCTCTCTTTCTCATGTGGTTTGTTACATTTACTTTCTCTTTCGTTTCTTGTGCAGATATGAAATTTTGGATTTATATGTGTAGATTAATGTGTTGTGTCTTATGTGTTTTTAATTGAATTTATTTGTTGACTTGGTGAAATTGGCTGCATAAATTGATTACTTGACCTTCGAATTTGTTGAACCTGCTGCTGTCTTTCTCCCCGAAGAAATGGGATTGGGACCTTTATGCATTGTGATTCTATTGCCAAACCTCTTTGGCGTAGAAGTAGTTTCTGACAAGTACATTCAGTAATCCAATTGGAAAAGATAAAAAGATAAATTATGAAAAAGTAGTTCCTTTGAAAGTTAATAGAGCTTTCCTGATGAGAGGAAGATAATGCCTTGTAATATAAGGTTCATCTTATATACATACCCAAAGGAAAGTTTTACTTTGGTATGTGGGTATGGAGGAAGATGCTTTCCTATATTATTTTTAGAAAAGATATTTTTACTCTGAGAAATCATTTTCTTGATGGTTTTCCTCTGTTTAATTGGGTATGAAGCCGGTGACTGCCAAGTGTATGGTAAAGAAGAGTATTTGTAAAGGGAATCGACTTCCCAACAAGTGAAGGAAGTCATTGCTCCCTTTTGGTGAAAATATATTCATTGGAGATAACATTTTTCACAATTAGGGCAACCAAACACTGAAAGGATTTCGTCAAGGAAAATTCTTTCCTAAGAACATATTCTGACATACAAACACATATTTTCTATCCCTTCATATATATATCAGGCTTGTAATTGGTGCTGGGTAACTTGTTTGCAGATTCGGCTAGGATGGACTGAAACCGCCATGATTGCAGGTGCAAGGGATGTCGGAGTGTCACCTTCCATTGTTGGATCATTTCCTCGGAAAGAAGCTGCACTAGTGGAGGTAAATGAGGGTTCACCTACATTTACTCATAGTTCTGGATTTTTTAATGTGACTGGACTTTGTGGGCATTATAGGGCTCCAACATATTTGGTTTTGCTAAAAATGTTGATATAAGATTATCTGCCTCTCAGTTTTGTTTATCTTTTATTTTGGTTTTCCTATTTATCTATCTGCACTTAATTTGTCTGGTACGAGTATAACTCAAAGGAACTCCATTGAGGTAATATGCAAAGTCAACAACGTAATAGTTGTGTTTCCTTAATAAAAGGATTTTTAATGATTTTGGTAAAGTAAAAGGATTATTAATGATATATCCTTGACACCTTATAAGTTATAAGTATATAGTTTATGTAGCCATTCAAATGACTACACTTGGATCGAGGTTTTCCAAAACGCCCTCTTCCTCGCCGATTCTCCATAGACTGGTATGTACGCTTTTCTGTGGTTTGAGATGCGAGAATAGAGGAGTCAACAATGAGTGATGAAACTTCTTTGTGACTGGGAGGTGTAGCAAGACGAAATAGACGACAGAAGAATTCATCAATTGAGGGAACTGTAGGATTGGCTAGAATCTGGTCACATACAGAGCTATGGTCTGTAGGAAGTCCAACAAGTGTAAGAATTAGAAACAATGTCTGCCTTTGTTCTTGTTGCTTTTCCACGATTGTCGTGATACGCATCAATGTTTCAAATTCCTCCATGACTGCCTGTACTTGTCCGAAGTAAGTAAACATATCGGATTCTTGTTTCTTTAAGTTGGTCATCCGAGATATCACATCATAGTATCGAGATATGTCGTTAGTGTATAAAGCACGTGCCTTTTCCCAAACTAAATAACATGTCTGGAATTGGCGAAACAAGGGCATCAACTTAGAATCAACAGAGCGCCAAAGGAGACTACATAATTGGGCATCCACTTTCTCCCATTGTGCTTCGGCTTTTGCACCATGGTCATTAGACTTTGTCTTTTCATCTACAATACAAGCATTGTTTGTTAAGTGATCTTGAACACCTTGACCCTTGCACCACAACTCAACTGAAGAAGCCCAAGCTAAATAGTTTGAACTTCAGATTAATGGTTATGAAGTGATTGTAGGGCTTGAACTTCCAATCCCTGTATTTTTGGAGCCAAAAACATCACACCCGGAAGACATTTTTTTGAAATTTGGCTTGAAGAGAGTAAGAAACTTGTTGGAAACTGCCGGAATCTACCTATAGTAGCCTAAAAGTTCTGATATCGCTGGAAACTTGCCGAAAACTGCCTGAAAATCACCGGAACCCTAATTCCGGTGATCGGATCTAGAGAAAACTGTCCATGTTCTGGTCGGAAATACTGGGCGACCCAACGGAAGAAAATTGCTCGAAAAAAAATTGACAGGAGCAGCACTCACGTGCCGCGTGCGTGAACAAATCTTGCCGGAAAATTTTCACCTTCGATCTGCGCGTGGGGGTTATTTTCCGGTGGGTCTGGCTGGGGGTCGTCTGAGCTTCCCGAGCCTCGTGACAGTGTTGTCTTTTGCACAACACCTTCAAAATAAACGATGACACAAATCAGTCCACCGTCGTCACCGAAATTTGACACCGATGACTTGAAGTGCTCACCAATGCTCTTATACCATGTGAGATATATATGGCAAGAATATTATTCAATTGTGTATATACATTGTTACATTAAGACCCTATTTATAGACACTACATTGGAACCCTTTTCCGACTAGGATTCCTATTCCTATTCTTCTTACTATTCCTATTCTAAGTAAGAAATACTTACTCCTATTCTAACAATTATGTGCTCTCTTTGATGACCATACCAAATAACGAGCCAAATCCTAAGATATTGCTGATTTGTTTAGCATTTGCGAGAAGGCCTAAAAAGCTAGATGTTTTGGTCTCTGACTTTGTTTTAATGCACATTAATTACCATTGGCAAGGCTCTTAATGCTCATTCAGCTGTCAAGCTTCGTCTTTTCTTGAATTATATACAACATTGCTTTCAGACTTATACTGGCTTCTTACATGTTTATTATTTATAGTTTAGCTGATCTAGTTAATGCTTGTATTTTCTTTCTTTTTTCGGCAAATCAATAAGTAAATCCTCTGTTGATCTTTTATATTGAACATCTTTTTTTCTCAGTATTTTATGGACGAGTGTCTGGAAAGACTCATTGATATCATTGAATCAAGGAACGATCTGAATAACTTAATACCTAGTGAGCGGATAGCAAAGCTTGTACGAATTCGCTTGGAAATGCAAACCCCTTACATATCAAAATGGCCACAAGCTCTC</genome_strand>
        <mrna_strand>TGATATTCATACTACACTCTCTCTATTGAAGCTCCAAAATAGTTGCGAACAAATCGTTGACAATGTATCGATCGGCGGCAAAGAGGTTACTACCGGCGTTTTACCGGCGACGCCAGGATGCAGTATCATGCATTCGAACCCTAGCAGCAGACTACCCCACTCGATTCATGACTTCAGCTGCCACCGGAAATATTCCTGATCAGAACCCTATTCCGGTTAACCCTATTCTTCCTAGCTCTAATCCGACCGACTCTACCGCATCATCATCTTGGAAGGAAGAAGAAAGGACACGTTTTCAGGATACTGATGCAAAATCTAGCTCGAGAACAAAGCGGCCTAAAGCGCATTACAAGGACGAAGAGGCCCTTGTACTCAGTGCCTCTCTTTCTCATGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGGCTAGGATGGACTGAAACCGCCATGATTGCAGGTGCAAGGGATGTCGGAGTGTCACCTTCCATTGTTGGATCATTTCCTCGGAAAGAAGCTGCACTAGTGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTTATGGACGAGTGTCTGGAAAGACTCATTGATATCATTGAATCAAGGAACGATCTGAATAACTTAATACCTAGTGAGCGGATAGCAAAGCTTGTACGAATTCGCTTGGAAATGCAAACCCCTTACATATCAAAATGGCCACAAGCTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E376530" ref_strand="+" ref_description="SGN-E376530 [TUS-17-H7]">
      <seq>tgatattcatactacactctctctattgaagctccaaaatagttgcgaacaaatcgttgacaatgtatcgatcggcggcaaagaggttactaccggcgttttaccggcgacgccaggatgcagtatcatgcattcgaaccctagcagcagactaccccactcgattcatgacttcagctgccaccggaaatattcctgatcagaaccctattccggttaaccctattcttcctagctctaatccgaccgactctaccgcatcatcatcttggaaggaagaagaaaggacacgttttcaggatactgatgcaaaatctagctcgagaacaaagcggcctaaagcgcattacaaggacgaagaggcccttgtactcagtgcctctctttctcatgtgattcggctaggatggactgaaaccgccatgattgcaggtgcaagggatgtcggagtgtcaccttccattgttggatcatttcctcggaaagaagctgcactagtggagtattttatggacgagtgtctggaaagactcattgatatcattgaatcaaggaacgatctgaataacttaatacctagtgagcggatagcaaagcttgtacgaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="121426" stop="117297"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121126" g_stop="120732" g_length="395"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="395" r_length="395" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120731" i_stop="119943" i_length="789">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="119942" g_stop="119835" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="396" r_stop="503" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="119834" i_stop="117701" i_length="2134">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.904" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="117700" g_stop="117597" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="504" r_stop="607" r_length="104" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E376530" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>607</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E376530" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121126" e_stop="120732"/>
          <exon e_start="119942" e_stop="119835"/>
          <exon e_start="117700" e_stop="117597"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATATTCATACTACACTCTCTCTATTGAAGCTCCAAAATAGTTGCGAACAAATCGTTGACAATGTATCGATCGGCGGCAAAGAGGTTACTACCGGCGTTTTACCGGCGACGCCAGGATGCAGTATCATGCATTCGAACCCTAGCAGCAGACTACCCCACTCGATTCATGACTTCAGCTGCCACCGGAAATATTCCTGATCAGAACCCTATTCCGGTTAACCCTATTCTTCCTAGCTCTAATCCGACCGACTCTACCGCATCATCATCTTGGAAGGAAGAAGAAAGGACACGTTTTCAGGATACTGATGCAAAATCTAGCTCGAGAACAAAGCGGCCTAAAGCGCATTACAAGGACGAAGAGGCCCTTGTACTCAGTGCCTCTCTTTCTCATGTGGTTTGTTACATTTACTTTCTCTTTCGTTTCTTGTGCAGATATGAAATTTTGGATTTATATGTGTAGATTAATGTGTTGTGTCTTATGTGTTTTTAATTGAATTTATTTGTTGACTTGGTGAAATTGGCTGCATAAATTGATTACTTGACCTTCGAATTTGTTGAACCTGCTGCTGTCTTTCTCCCCGAAGAAATGGGATTGGGACCTTTATGCATTGTGATTCTATTGCCAAACCTCTTTGGCGTAGAAGTAGTTTCTGACAAGTACATTCAGTAATCCAATTGGAAAAGATAAAAAGATAAATTATGAAAAAGTAGTTCCTTTGAAAGTTAATAGAGCTTTCCTGATGAGAGGAAGATAATGCCTTGTAATATAAGGTTCATCTTATATACATACCCAAAGGAAAGTTTTACTTTGGTATGTGGGTATGGAGGAAGATGCTTTCCTATATTATTTTTAGAAAAGATATTTTTACTCTGAGAAATCATTTTCTTGATGGTTTTCCTCTGTTTAATTGGGTATGAAGCCGGTGACTGCCAAGTGTATGGTAAAGAAGAGTATTTGTAAAGGGAATCGACTTCCCAACAAGTGAAGGAAGTCATTGCTCCCTTTTGGTGAAAATATATTCATTGGAGATAACATTTTTCACAATTAGGGCAACCAAACACTGAAAGGATTTCGTCAAGGAAAATTCTTTCCTAAGAACATATTCTGACATACAAACACATATTTTCTATCCCTTCATATATATATCAGGCTTGTAATTGGTGCTGGGTAACTTGTTTGCAGATTCGGCTAGGATGGACTGAAACCGCCATGATTGCAGGTGCAAGGGATGTCGGAGTGTCACCTTCCATTGTTGGATCATTTCCTCGGAAAGAAGCTGCACTAGTGGAGGTAAATGAGGGTTCACCTACATTTACTCATAGTTCTGGATTTTTTAATGTGACTGGACTTTGTGGGCATTATAGGGCTCCAACATATTTGGTTTTGCTAAAAATGTTGATATAAGATTATCTGCCTCTCAGTTTTGTTTATCTTTTATTTTGGTTTTCCTATTTATCTATCTGCACTTAATTTGTCTGGTACGAGTATAACTCAAAGGAACTCCATTGAGGTAATATGCAAAGTCAACAACGTAATAGTTGTGTTTCCTTAATAAAAGGATTTTTAATGATTTTGGTAAAGTAAAAGGATTATTAATGATATATCCTTGACACCTTATAAGTTATAAGTATATAGTTTATGTAGCCATTCAAATGACTACACTTGGATCGAGGTTTTCCAAAACGCCCTCTTCCTCGCCGATTCTCCATAGACTGGTATGTACGCTTTTCTGTGGTTTGAGATGCGAGAATAGAGGAGTCAACAATGAGTGATGAAACTTCTTTGTGACTGGGAGGTGTAGCAAGACGAAATAGACGACAGAAGAATTCATCAATTGAGGGAACTGTAGGATTGGCTAGAATCTGGTCACATACAGAGCTATGGTCTGTAGGAAGTCCAACAAGTGTAAGAATTAGAAACAATGTCTGCCTTTGTTCTTGTTGCTTTTCCACGATTGTCGTGATACGCATCAATGTTTCAAATTCCTCCATGACTGCCTGTACTTGTCCGAAGTAAGTAAACATATCGGATTCTTGTTTCTTTAAGTTGGTCATCCGAGATATCACATCATAGTATCGAGATATGTCGTTAGTGTATAAAGCACGTGCCTTTTCCCAAACTAAATAACATGTCTGGAATTGGCGAAACAAGGGCATCAACTTAGAATCAACAGAGCGCCAAAGGAGACTACATAATTGGGCATCCACTTTCTCCCATTGTGCTTCGGCTTTTGCACCATGGTCATTAGACTTTGTCTTTTCATCTACAATACAAGCATTGTTTGTTAAGTGATCTTGAACACCTTGACCCTTGCACCACAACTCAACTGAAGAAGCCCAAGCTAAATAGTTTGAACTTCAGATTAATGGTTATGAAGTGATTGTAGGGCTTGAACTTCCAATCCCTGTATTTTTGGAGCCAAAAACATCACACCCGGAAGACATTTTTTTGAAATTTGGCTTGAAGAGAGTAAGAAACTTGTTGGAAACTGCCGGAATCTACCTATAGTAGCCTAAAAGTTCTGATATCGCTGGAAACTTGCCGAAAACTGCCTGAAAATCACCGGAACCCTAATTCCGGTGATCGGATCTAGAGAAAACTGTCCATGTTCTGGTCGGAAATACTGGGCGACCCAACGGAAGAAAATTGCTCGAAAAAAAATTGACAGGAGCAGCACTCACGTGCCGCGTGCGTGAACAAATCTTGCCGGAAAATTTTCACCTTCGATCTGCGCGTGGGGGTTATTTTCCGGTGGGTCTGGCTGGGGGTCGTCTGAGCTTCCCGAGCCTCGTGACAGTGTTGTCTTTTGCACAACACCTTCAAAATAAACGATGACACAAATCAGTCCACCGTCGTCACCGAAATTTGACACCGATGACTTGAAGTGCTCACCAATGCTCTTATACCATGTGAGATATATATGGCAAGAATATTATTCAATTGTGTATATACATTGTTACATTAAGACCCTATTTATAGACACTACATTGGAACCCTTTTCCGACTAGGATTCCTATTCCTATTCTTCTTACTATTCCTATTCTAAGTAAGAAATACTTACTCCTATTCTAACAATTATGTGCTCTCTTTGATGACCATACCAAATAACGAGCCAAATCCTAAGATATTGCTGATTTGTTTAGCATTTGCGAGAAGGCCTAAAAAGCTAGATGTTTTGGTCTCTGACTTTGTTTTAATGCACATTAATTACCATTGGCAAGGCTCTTAATGCTCATTCAGCTGTCAAGCTTCGTCTTTTCTTGAATTATATACAACATTGCTTTCAGACTTATACTGGCTTCTTACATGTTTATTATTTATAGTTTAGCTGATCTAGTTAATGCTTGTATTTTCTTTCTTTTTTCGGCAAATCAATAAGTAAATCCTCTGTTGATCTTTTATATTGAACATCTTTTTTTCTCAGTATTTTATGGACGAGTGTCTGGAAAGACTCATTGATATCATTGAATCAAGGAACGATCTGAATAACTTAATACCTAGTGAGCGGATAGCAAAGCTTGTACGAAT</genome_strand>
        <mrna_strand>TGATATTCATACTACACTCTCTCTATTGAAGCTCCAAAATAGTTGCGAACAAATCGTTGACAATGTATCGATCGGCGGCAAAGAGGTTACTACCGGCGTTTTACCGGCGACGCCAGGATGCAGTATCATGCATTCGAACCCTAGCAGCAGACTACCCCACTCGATTCATGACTTCAGCTGCCACCGGAAATATTCCTGATCAGAACCCTATTCCGGTTAACCCTATTCTTCCTAGCTCTAATCCGACCGACTCTACCGCATCATCATCTTGGAAGGAAGAAGAAAGGACACGTTTTCAGGATACTGATGCAAAATCTAGCTCGAGAACAAAGCGGCCTAAAGCGCATTACAAGGACGAAGAGGCCCTTGTACTCAGTGCCTCTCTTTCTCATGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGGCTAGGATGGACTGAAACCGCCATGATTGCAGGTGCAAGGGATGTCGGAGTGTCACCTTCCATTGTTGGATCATTTCCTCGGAAAGAAGCTGCACTAGTGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTTATGGACGAGTGTCTGGAAAGACTCATTGATATCATTGAATCAAGGAACGATCTGAATAACTTAATACCTAGTGAGCGGATAGCAAAGCTTGTACGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E449434" ref_strand="+" ref_description="SGN-E449434 [cSTS-6-B9]">
      <seq>cggttactgccggcgttttaccgccggcaccaggatgcaatatcaagtattcgaaccctagcagcagactaccccactcgatttatgacttcagctgccaccggaaatattcctgatcagaaccctattccgactagctctaatccgaccgactctaccgcatcatcatcttggaaggaagaagaaaggacacgttaccaggaaactgatgaaaaatctagctcgagaacaaagcggcctaaagcgcattacaaggacgaagaggcccgtgtactcagtgcctctctctctcatgtggtgcaagggatgtcggagtgtcaccttccattgttggatcatttgctcggaaagaagctgcactagtggagtattttatggatgagtgtctggaaagactcattgatgtcattgaatgaaggaacgatctgaaaaacttgatacctagggagcggggaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="121342" stop="117312"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121043" g_stop="120732" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="297" r_length="297" r_score="0.904"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120731" i_stop="119906" i_length="826">
            <donor d_prob="0.993" d_score="0.96"/>
            <acceptor a_prob="0.105" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="119905" g_stop="119835" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="298" r_stop="368" r_length="71" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="119834" i_stop="117701" i_length="2134">
            <donor d_prob="0.984" d_score="0.98"/>
            <acceptor a_prob="0.904" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="117700" g_stop="117612" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="369" r_stop="457" r_length="89" r_score="0.899"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E449434" ref_strand="+">
        <total_alignment_score>0.915</total_alignment_score>
        <cumulative_length_of_scored_exons>472</cumulative_length_of_scored_exons>
        <coverage percentage="1.033" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E449434" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121043" e_stop="120732"/>
          <exon e_start="119905" e_stop="119835"/>
          <exon e_start="117700" e_stop="117612"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGTTACTACCGGCGTTTTACCGGCGACGCCAGGATGCAGTATCATGCATTCGAACCCTAGCAGCAGACTACCCCACTCGATTCATGACTTCAGCTGCCACCGGAAATATTCCTGATCAGAACCCTATTCCGGTTAACCCTATTCTTCCTAGCTCTAATCCGACCGACTCTACCGCATCATCATCTTGGAAGGAAGAAGAAAGGACACGTTTTCAGGATACTGATGCAAAATCTAGCTCGAGAACAAAGCGGCCTAAAGCGCATTACAAGGACGAAGAGGCCCTTGTACTCAGTGCCTCTCTTTCTCATGTGGTTTGTTACATTTACTTTCTCTTTCGTTTCTTGTGCAGATATGAAATTTTGGATTTATATGTGTAGATTAATGTGTTGTGTCTTATGTGTTTTTAATTGAATTTATTTGTTGACTTGGTGAAATTGGCTGCATAAATTGATTACTTGACCTTCGAATTTGTTGAACCTGCTGCTGTCTTTCTCCCCGAAGAAATGGGATTGGGACCTTTATGCATTGTGATTCTATTGCCAAACCTCTTTGGCGTAGAAGTAGTTTCTGACAAGTACATTCAGTAATCCAATTGGAAAAGATAAAAAGATAAATTATGAAAAAGTAGTTCCTTTGAAAGTTAATAGAGCTTTCCTGATGAGAGGAAGATAATGCCTTGTAATATAAGGTTCATCTTATATACATACCCAAAGGAAAGTTTTACTTTGGTATGTGGGTATGGAGGAAGATGCTTTCCTATATTATTTTTAGAAAAGATATTTTTACTCTGAGAAATCATTTTCTTGATGGTTTTCCTCTGTTTAATTGGGTATGAAGCCGGTGACTGCCAAGTGTATGGTAAAGAAGAGTATTTGTAAAGGGAATCGACTTCCCAACAAGTGAAGGAAGTCATTGCTCCCTTTTGGTGAAAATATATTCATTGGAGATAACATTTTTCACAATTAGGGCAACCAAACACTGAAAGGATTTCGTCAAGGAAAATTCTTTCCTAAGAACATATTCTGACATACAAACACATATTTTCTATCCCTTCATATATATATCAGGCTTGTAATTGGTGCTGGGTAACTTGTTTGCAGATTCGGCTAGGATGGACTGAAACCGCCATGATTGCAGGTGCAAGGGATGTCGGAGTGTCACCTTCCATTGTTGGATCATTTCCTCGGAAAGAAGCTGCACTAGTGGAGGTAAATGAGGGTTCACCTACATTTACTCATAGTTCTGGATTTTTTAATGTGACTGGACTTTGTGGGCATTATAGGGCTCCAACATATTTGGTTTTGCTAAAAATGTTGATATAAGATTATCTGCCTCTCAGTTTTGTTTATCTTTTATTTTGGTTTTCCTATTTATCTATCTGCACTTAATTTGTCTGGTACGAGTATAACTCAAAGGAACTCCATTGAGGTAATATGCAAAGTCAACAACGTAATAGTTGTGTTTCCTTAATAAAAGGATTTTTAATGATTTTGGTAAAGTAAAAGGATTATTAATGATATATCCTTGACACCTTATAAGTTATAAGTATATAGTTTATGTAGCCATTCAAATGACTACACTTGGATCGAGGTTTTCCAAAACGCCCTCTTCCTCGCCGATTCTCCATAGACTGGTATGTACGCTTTTCTGTGGTTTGAGATGCGAGAATAGAGGAGTCAACAATGAGTGATGAAACTTCTTTGTGACTGGGAGGTGTAGCAAGACGAAATAGACGACAGAAGAATTCATCAATTGAGGGAACTGTAGGATTGGCTAGAATCTGGTCACATACAGAGCTATGGTCTGTAGGAAGTCCAACAAGTGTAAGAATTAGAAACAATGTCTGCCTTTGTTCTTGTTGCTTTTCCACGATTGTCGTGATACGCATCAATGTTTCAAATTCCTCCATGACTGCCTGTACTTGTCCGAAGTAAGTAAACATATCGGATTCTTGTTTCTTTAAGTTGGTCATCCGAGATATCACATCATAGTATCGAGATATGTCGTTAGTGTATAAAGCACGTGCCTTTTCCCAAACTAAATAACATGTCTGGAATTGGCGAAACAAGGGCATCAACTTAGAATCAACAGAGCGCCAAAGGAGACTACATAATTGGGCATCCACTTTCTCCCATTGTGCTTCGGCTTTTGCACCATGGTCATTAGACTTTGTCTTTTCATCTACAATACAAGCATTGTTTGTTAAGTGATCTTGAACACCTTGACCCTTGCACCACAACTCAACTGAAGAAGCCCAAGCTAAATAGTTTGAACTTCAGATTAATGGTTATGAAGTGATTGTAGGGCTTGAACTTCCAATCCCTGTATTTTTGGAGCCAAAAACATCACACCCGGAAGACATTTTTTTGAAATTTGGCTTGAAGAGAGTAAGAAACTTGTTGGAAACTGCCGGAATCTACCTATAGTAGCCTAAAAGTTCTGATATCGCTGGAAACTTGCCGAAAACTGCCTGAAAATCACCGGAACCCTAATTCCGGTGATCGGATCTAGAGAAAACTGTCCATGTTCTGGTCGGAAATACTGGGCGACCCAACGGAAGAAAATTGCTCGAAAAAAAATTGACAGGAGCAGCACTCACGTGCCGCGTGCGTGAACAAATCTTGCCGGAAAATTTTCACCTTCGATCTGCGCGTGGGGGTTATTTTCCGGTGGGTCTGGCTGGGGGTCGTCTGAGCTTCCCGAGCCTCGTGACAGTGTTGTCTTTTGCACAACACCTTCAAAATAAACGATGACACAAATCAGTCCACCGTCGTCACCGAAATTTGACACCGATGACTTGAAGTGCTCACCAATGCTCTTATACCATGTGAGATATATATGGCAAGAATATTATTCAATTGTGTATATACATTGTTACATTAAGACCCTATTTATAGACACTACATTGGAACCCTTTTCCGACTAGGATTCCTATTCCTATTCTTCTTACTATTCCTATTCTAAGTAAGAAATACTTACTCCTATTCTAACAATTATGTGCTCTCTTTGATGACCATACCAAATAACGAGCCAAATCCTAAGATATTGCTGATTTGTTTAGCATTTGCGAGAAGGCCTAAAAAGCTAGATGTTTTGGTCTCTGACTTTGTTTTAATGCACATTAATTACCATTGGCAAGGCTCTTAATGCTCATTCAGCTGTCAAGCTTCGTCTTTTCTTGAATTATATACAACATTGCTTTCAGACTTATACTGGCTTCTTACATGTTTATTATTTATAGTTTAGCTGATCTAGTTAATGCTTGTATTTTCTTTCTTTTTTCGGCAAATCAATAAGTAAATCCTCTGTTGATCTTTTATATTGAACATCTTTTTTTCTCAGTATTTTATGGACGAGTGTCTGGAAAGACTCATTGATATCATTGAATCAAGGAACGATCTGAATAACTTAATACCTAGTGAGCGGATAGC</genome_strand>
        <mrna_strand>CGGTTACTGCCGGCGTTTTACCGCCGGCACCAGGATGCAATATCAAGTATTCGAACCCTAGCAGCAGACTACCCCACTCGATTTATGACTTCAGCTGCCACCGGAAATATTCCTGATCAGAACCCTATTCC-G---A--CT---------AGCTCTAATCCGACCGACTCTACCGCATCATCATCTTGGAAGGAAGAAGAAAGGACACGTTACCAGGAAACTGATGAAAAATCTAGCTCGAGAACAAAGCGGCCTAAAGCGCATTACAAGGACGAAGAGGCCCGTGTACTCAGTGCCTCTCTCTCTCATGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAAGGGATGTCGGAGTGTCACCTTCCATTGTTGGATCATTTGCTCGGAAAGAAGCTGCACTAGTGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTTATGGATGAGTGTCTGGAAAGACTCATTGATGTCATTGAATGAAGGAACGATCTGAAAAACTTGATACCTAGGGAGCGGGGAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E330655" ref_strand="+" ref_description="SGN-E330655 [cTOD-8-P14]">
      <seq>tgatattcatactacactctctctattgaagctccaaaatagttgcgaacaaatcgttgacaatgtatcgatcggcggcaaagaggttactaccggcgttttaccggcgacgccaggatgcagtatcatgcattcgaaccctagcagcagactaccccactcgattcatgacttcagctgccaccggaaatattcctgatcagaaccctattccggttaaccctattcttcctagctctaatccgaccgactctaccgcatcatcatcttggaaggaagaagaaaggacacgttttcaggatactgatgcaaaatctagctcgagaacaaagcggcctaaagcgcattacaaggacgaagaggcccttgtactcagtgcctctctttctcatgtgattcggctaggatggactgaaaccgccatgattgcaggtgcaagggatgtcggagtgtcaccttccattgttggatcatttcctcggaaagaagctgcactagtggagtattttatggacgagtgtctggaaagactcattgatatcattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="121426" stop="117357"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121126" g_stop="120732" g_length="395"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="395" r_length="395" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120731" i_stop="119943" i_length="789">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="119942" g_stop="119835" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="396" r_stop="503" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="119834" i_stop="117701" i_length="2134">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.904" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="117700" g_stop="117657" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="504" r_stop="547" r_length="44" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E330655" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>547</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E330655" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121126" e_stop="120732"/>
          <exon e_start="119942" e_stop="119835"/>
          <exon e_start="117700" e_stop="117657"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATATTCATACTACACTCTCTCTATTGAAGCTCCAAAATAGTTGCGAACAAATCGTTGACAATGTATCGATCGGCGGCAAAGAGGTTACTACCGGCGTTTTACCGGCGACGCCAGGATGCAGTATCATGCATTCGAACCCTAGCAGCAGACTACCCCACTCGATTCATGACTTCAGCTGCCACCGGAAATATTCCTGATCAGAACCCTATTCCGGTTAACCCTATTCTTCCTAGCTCTAATCCGACCGACTCTACCGCATCATCATCTTGGAAGGAAGAAGAAAGGACACGTTTTCAGGATACTGATGCAAAATCTAGCTCGAGAACAAAGCGGCCTAAAGCGCATTACAAGGACGAAGAGGCCCTTGTACTCAGTGCCTCTCTTTCTCATGTGGTTTGTTACATTTACTTTCTCTTTCGTTTCTTGTGCAGATATGAAATTTTGGATTTATATGTGTAGATTAATGTGTTGTGTCTTATGTGTTTTTAATTGAATTTATTTGTTGACTTGGTGAAATTGGCTGCATAAATTGATTACTTGACCTTCGAATTTGTTGAACCTGCTGCTGTCTTTCTCCCCGAAGAAATGGGATTGGGACCTTTATGCATTGTGATTCTATTGCCAAACCTCTTTGGCGTAGAAGTAGTTTCTGACAAGTACATTCAGTAATCCAATTGGAAAAGATAAAAAGATAAATTATGAAAAAGTAGTTCCTTTGAAAGTTAATAGAGCTTTCCTGATGAGAGGAAGATAATGCCTTGTAATATAAGGTTCATCTTATATACATACCCAAAGGAAAGTTTTACTTTGGTATGTGGGTATGGAGGAAGATGCTTTCCTATATTATTTTTAGAAAAGATATTTTTACTCTGAGAAATCATTTTCTTGATGGTTTTCCTCTGTTTAATTGGGTATGAAGCCGGTGACTGCCAAGTGTATGGTAAAGAAGAGTATTTGTAAAGGGAATCGACTTCCCAACAAGTGAAGGAAGTCATTGCTCCCTTTTGGTGAAAATATATTCATTGGAGATAACATTTTTCACAATTAGGGCAACCAAACACTGAAAGGATTTCGTCAAGGAAAATTCTTTCCTAAGAACATATTCTGACATACAAACACATATTTTCTATCCCTTCATATATATATCAGGCTTGTAATTGGTGCTGGGTAACTTGTTTGCAGATTCGGCTAGGATGGACTGAAACCGCCATGATTGCAGGTGCAAGGGATGTCGGAGTGTCACCTTCCATTGTTGGATCATTTCCTCGGAAAGAAGCTGCACTAGTGGAGGTAAATGAGGGTTCACCTACATTTACTCATAGTTCTGGATTTTTTAATGTGACTGGACTTTGTGGGCATTATAGGGCTCCAACATATTTGGTTTTGCTAAAAATGTTGATATAAGATTATCTGCCTCTCAGTTTTGTTTATCTTTTATTTTGGTTTTCCTATTTATCTATCTGCACTTAATTTGTCTGGTACGAGTATAACTCAAAGGAACTCCATTGAGGTAATATGCAAAGTCAACAACGTAATAGTTGTGTTTCCTTAATAAAAGGATTTTTAATGATTTTGGTAAAGTAAAAGGATTATTAATGATATATCCTTGACACCTTATAAGTTATAAGTATATAGTTTATGTAGCCATTCAAATGACTACACTTGGATCGAGGTTTTCCAAAACGCCCTCTTCCTCGCCGATTCTCCATAGACTGGTATGTACGCTTTTCTGTGGTTTGAGATGCGAGAATAGAGGAGTCAACAATGAGTGATGAAACTTCTTTGTGACTGGGAGGTGTAGCAAGACGAAATAGACGACAGAAGAATTCATCAATTGAGGGAACTGTAGGATTGGCTAGAATCTGGTCACATACAGAGCTATGGTCTGTAGGAAGTCCAACAAGTGTAAGAATTAGAAACAATGTCTGCCTTTGTTCTTGTTGCTTTTCCACGATTGTCGTGATACGCATCAATGTTTCAAATTCCTCCATGACTGCCTGTACTTGTCCGAAGTAAGTAAACATATCGGATTCTTGTTTCTTTAAGTTGGTCATCCGAGATATCACATCATAGTATCGAGATATGTCGTTAGTGTATAAAGCACGTGCCTTTTCCCAAACTAAATAACATGTCTGGAATTGGCGAAACAAGGGCATCAACTTAGAATCAACAGAGCGCCAAAGGAGACTACATAATTGGGCATCCACTTTCTCCCATTGTGCTTCGGCTTTTGCACCATGGTCATTAGACTTTGTCTTTTCATCTACAATACAAGCATTGTTTGTTAAGTGATCTTGAACACCTTGACCCTTGCACCACAACTCAACTGAAGAAGCCCAAGCTAAATAGTTTGAACTTCAGATTAATGGTTATGAAGTGATTGTAGGGCTTGAACTTCCAATCCCTGTATTTTTGGAGCCAAAAACATCACACCCGGAAGACATTTTTTTGAAATTTGGCTTGAAGAGAGTAAGAAACTTGTTGGAAACTGCCGGAATCTACCTATAGTAGCCTAAAAGTTCTGATATCGCTGGAAACTTGCCGAAAACTGCCTGAAAATCACCGGAACCCTAATTCCGGTGATCGGATCTAGAGAAAACTGTCCATGTTCTGGTCGGAAATACTGGGCGACCCAACGGAAGAAAATTGCTCGAAAAAAAATTGACAGGAGCAGCACTCACGTGCCGCGTGCGTGAACAAATCTTGCCGGAAAATTTTCACCTTCGATCTGCGCGTGGGGGTTATTTTCCGGTGGGTCTGGCTGGGGGTCGTCTGAGCTTCCCGAGCCTCGTGACAGTGTTGTCTTTTGCACAACACCTTCAAAATAAACGATGACACAAATCAGTCCACCGTCGTCACCGAAATTTGACACCGATGACTTGAAGTGCTCACCAATGCTCTTATACCATGTGAGATATATATGGCAAGAATATTATTCAATTGTGTATATACATTGTTACATTAAGACCCTATTTATAGACACTACATTGGAACCCTTTTCCGACTAGGATTCCTATTCCTATTCTTCTTACTATTCCTATTCTAAGTAAGAAATACTTACTCCTATTCTAACAATTATGTGCTCTCTTTGATGACCATACCAAATAACGAGCCAAATCCTAAGATATTGCTGATTTGTTTAGCATTTGCGAGAAGGCCTAAAAAGCTAGATGTTTTGGTCTCTGACTTTGTTTTAATGCACATTAATTACCATTGGCAAGGCTCTTAATGCTCATTCAGCTGTCAAGCTTCGTCTTTTCTTGAATTATATACAACATTGCTTTCAGACTTATACTGGCTTCTTACATGTTTATTATTTATAGTTTAGCTGATCTAGTTAATGCTTGTATTTTCTTTCTTTTTTCGGCAAATCAATAAGTAAATCCTCTGTTGATCTTTTATATTGAACATCTTTTTTTCTCAGTATTTTATGGACGAGTGTCTGGAAAGACTCATTGATATCATTGA</genome_strand>
        <mrna_strand>TGATATTCATACTACACTCTCTCTATTGAAGCTCCAAAATAGTTGCGAACAAATCGTTGACAATGTATCGATCGGCGGCAAAGAGGTTACTACCGGCGTTTTACCGGCGACGCCAGGATGCAGTATCATGCATTCGAACCCTAGCAGCAGACTACCCCACTCGATTCATGACTTCAGCTGCCACCGGAAATATTCCTGATCAGAACCCTATTCCGGTTAACCCTATTCTTCCTAGCTCTAATCCGACCGACTCTACCGCATCATCATCTTGGAAGGAAGAAGAAAGGACACGTTTTCAGGATACTGATGCAAAATCTAGCTCGAGAACAAAGCGGCCTAAAGCGCATTACAAGGACGAAGAGGCCCTTGTACTCAGTGCCTCTCTTTCTCATGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGGCTAGGATGGACTGAAACCGCCATGATTGCAGGTGCAAGGGATGTCGGAGTGTCACCTTCCATTGTTGGATCATTTCCTCGGAAAGAAGCTGCACTAGTGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTTATGGACGAGTGTCTGGAAAGACTCATTGATATCATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E298188" ref_strand="+" ref_description="SGN-E298188 [cLEW-9-G3]">
      <seq>tggagccttttcctgatattcatactacactctctctattgaagctccaaaatagttgcgaacaaatcgttgacaatgtatcgatcggcggcaaagaggttactaccggcgttttaccggcgacgccaggatgcagtatcatgcattcgaaccctagcagcagactaccccactcgattcatgacttcagctgccaccggaaatattcctgatcagaaccctattccggttaaccctattcttcctagctctaatccgaccgactctaccgcatcatcatcttggaaggaagaagaaaggacacgttttcaggatactgatgcaaaatctagctcgagaacaaagcggcctaaagcgcattacaaggacgaagaggcccttgtactcagtgcctctctttctcatgtgattcggctaggatggactgaaaccggcatgattgcaggtgcaagggatgtcggagtgtcaccttccattgttggatcatttcctcggaaagaagctgcactagtggagtattttatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="121439" stop="119527"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121139" g_stop="120732" g_length="408"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="408" r_length="408" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120731" i_stop="119943" i_length="789">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="119942" g_stop="119835" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="409" r_stop="516" r_length="108" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E298188" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>516</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E298188" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121139" e_stop="120732"/>
          <exon e_start="119942" e_stop="119835"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAGCCTTTTCCTGATATTCATACTACACTCTCTCTATTGAAGCTCCAAAATAGTTGCGAACAAATCGTTGACAATGTATCGATCGGCGGCAAAGAGGTTACTACCGGCGTTTTACCGGCGACGCCAGGATGCAGTATCATGCATTCGAACCCTAGCAGCAGACTACCCCACTCGATTCATGACTTCAGCTGCCACCGGAAATATTCCTGATCAGAACCCTATTCCGGTTAACCCTATTCTTCCTAGCTCTAATCCGACCGACTCTACCGCATCATCATCTTGGAAGGAAGAAGAAAGGACACGTTTTCAGGATACTGATGCAAAATCTAGCTCGAGAACAAAGCGGCCTAAAGCGCATTACAAGGACGAAGAGGCCCTTGTACTCAGTGCCTCTCTTTCTCATGTGGTTTGTTACATTTACTTTCTCTTTCGTTTCTTGTGCAGATATGAAATTTTGGATTTATATGTGTAGATTAATGTGTTGTGTCTTATGTGTTTTTAATTGAATTTATTTGTTGACTTGGTGAAATTGGCTGCATAAATTGATTACTTGACCTTCGAATTTGTTGAACCTGCTGCTGTCTTTCTCCCCGAAGAAATGGGATTGGGACCTTTATGCATTGTGATTCTATTGCCAAACCTCTTTGGCGTAGAAGTAGTTTCTGACAAGTACATTCAGTAATCCAATTGGAAAAGATAAAAAGATAAATTATGAAAAAGTAGTTCCTTTGAAAGTTAATAGAGCTTTCCTGATGAGAGGAAGATAATGCCTTGTAATATAAGGTTCATCTTATATACATACCCAAAGGAAAGTTTTACTTTGGTATGTGGGTATGGAGGAAGATGCTTTCCTATATTATTTTTAGAAAAGATATTTTTACTCTGAGAAATCATTTTCTTGATGGTTTTCCTCTGTTTAATTGGGTATGAAGCCGGTGACTGCCAAGTGTATGGTAAAGAAGAGTATTTGTAAAGGGAATCGACTTCCCAACAAGTGAAGGAAGTCATTGCTCCCTTTTGGTGAAAATATATTCATTGGAGATAACATTTTTCACAATTAGGGCAACCAAACACTGAAAGGATTTCGTCAAGGAAAATTCTTTCCTAAGAACATATTCTGACATACAAACACATATTTTCTATCCCTTCATATATATATCAGGCTTGTAATTGGTGCTGGGTAACTTGTTTGCAGATTCGGCTAGGATGGACTGAAACCGCCATGATTGCAGGTGCAAGGGATGTCGGAGTGTCACCTTCCATTGTTGGATCATTTCCTCGGAAAGAAGCTGCACTAGTGGAG</genome_strand>
        <mrna_strand>TGGAGCCTTTTCCTGATATTCATACTACACTCTCTCTATTGAAGCTCCAAAATAGTTGCGAACAAATCGTTGACAATGTATCGATCGGCGGCAAAGAGGTTACTACCGGCGTTTTACCGGCGACGCCAGGATGCAGTATCATGCATTCGAACCCTAGCAGCAGACTACCCCACTCGATTCATGACTTCAGCTGCCACCGGAAATATTCCTGATCAGAACCCTATTCCGGTTAACCCTATTCTTCCTAGCTCTAATCCGACCGACTCTACCGCATCATCATCTTGGAAGGAAGAAGAAAGGACACGTTTTCAGGATACTGATGCAAAATCTAGCTCGAGAACAAAGCGGCCTAAAGCGCATTACAAGGACGAAGAGGCCCTTGTACTCAGTGCCTCTCTTTCTCATGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGGCTAGGATGGACTGAAACCGGCATGATTGCAGGTGCAAGGGATGTCGGAGTGTCACCTTCCATTGTTGGATCATTTCCTCGGAAAGAAGCTGCACTAGTGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E240481" ref_strand="+" ref_description="SGN-E240481 [cLED-21-F11]">
      <seq>ccagatcgatcggcggcaaagaggttactaccggcgttttaccggcgacgccccgatgcagtatcatgcattcgaaccctagcagcagactaccccactcgattcatgacttcagctgccaccggaaatattcctgatcagaaccctattccggttaaccctattcttcctagctctaatccgaccgactctaccgcatcatcatcttggaaggaagaagaaaggacacgttttcaggatactgatgcaaaatctagctcgagaacaaagcggcctaaagcgcattacaaggacgaagaggcccttgtactcagtgcctctctttctcatgtgattcggctaggatggactgaaaccgccatgattgcaggtgcaagggatgtcggagtgtcaccttccattggtggatcatttcctcggaaagaagctgcactagtggagtattttatggac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="121366" stop="119524"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121066" g_stop="120732" g_length="335"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="333" r_length="333" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120731" i_stop="119943" i_length="789">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="119942" g_stop="119835" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="441" r_length="108" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E240481" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>443</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E240481" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121066" e_stop="120732"/>
          <exon e_start="119942" e_stop="119835"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATGTATCGATCGGCGGCAAAGAGGTTACTACCGGCGTTTTACCGGCGACGCCAGGATGCAGTATCATGCATTCGAACCCTAGCAGCAGACTACCCCACTCGATTCATGACTTCAGCTGCCACCGGAAATATTCCTGATCAGAACCCTATTCCGGTTAACCCTATTCTTCCTAGCTCTAATCCGACCGACTCTACCGCATCATCATCTTGGAAGGAAGAAGAAAGGACACGTTTTCAGGATACTGATGCAAAATCTAGCTCGAGAACAAAGCGGCCTAAAGCGCATTACAAGGACGAAGAGGCCCTTGTACTCAGTGCCTCTCTTTCTCATGTGGTTTGTTACATTTACTTTCTCTTTCGTTTCTTGTGCAGATATGAAATTTTGGATTTATATGTGTAGATTAATGTGTTGTGTCTTATGTGTTTTTAATTGAATTTATTTGTTGACTTGGTGAAATTGGCTGCATAAATTGATTACTTGACCTTCGAATTTGTTGAACCTGCTGCTGTCTTTCTCCCCGAAGAAATGGGATTGGGACCTTTATGCATTGTGATTCTATTGCCAAACCTCTTTGGCGTAGAAGTAGTTTCTGACAAGTACATTCAGTAATCCAATTGGAAAAGATAAAAAGATAAATTATGAAAAAGTAGTTCCTTTGAAAGTTAATAGAGCTTTCCTGATGAGAGGAAGATAATGCCTTGTAATATAAGGTTCATCTTATATACATACCCAAAGGAAAGTTTTACTTTGGTATGTGGGTATGGAGGAAGATGCTTTCCTATATTATTTTTAGAAAAGATATTTTTACTCTGAGAAATCATTTTCTTGATGGTTTTCCTCTGTTTAATTGGGTATGAAGCCGGTGACTGCCAAGTGTATGGTAAAGAAGAGTATTTGTAAAGGGAATCGACTTCCCAACAAGTGAAGGAAGTCATTGCTCCCTTTTGGTGAAAATATATTCATTGGAGATAACATTTTTCACAATTAGGGCAACCAAACACTGAAAGGATTTCGTCAAGGAAAATTCTTTCCTAAGAACATATTCTGACATACAAACACATATTTTCTATCCCTTCATATATATATCAGGCTTGTAATTGGTGCTGGGTAACTTGTTTGCAGATTCGGCTAGGATGGACTGAAACCGCCATGATTGCAGGTGCAAGGGATGTCGGAGTGTCACCTTCCATTGTTGGATCATTTCCTCGGAAAGAAGCTGCACTAGTGGAG</genome_strand>
        <mrna_strand>CCA-G-ATCGATCGGCGGCAAAGAGGTTACTACCGGCGTTTTACCGGCGACGCCCCGATGCAGTATCATGCATTCGAACCCTAGCAGCAGACTACCCCACTCGATTCATGACTTCAGCTGCCACCGGAAATATTCCTGATCAGAACCCTATTCCGGTTAACCCTATTCTTCCTAGCTCTAATCCGACCGACTCTACCGCATCATCATCTTGGAAGGAAGAAGAAAGGACACGTTTTCAGGATACTGATGCAAAATCTAGCTCGAGAACAAAGCGGCCTAAAGCGCATTACAAGGACGAAGAGGCCCTTGTACTCAGTGCCTCTCTTTCTCATGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGGCTAGGATGGACTGAAACCGCCATGATTGCAGGTGCAAGGGATGTCGGAGTGTCACCTTCCATTGGTGGATCATTTCCTCGGAAAGAAGCTGCACTAGTGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E233609" ref_strand="+" ref_description="SGN-E233609 [cLED-14-G7]">
      <seq>tcgatcggcggcaaagaggttactaccggcgttttaccggcgacgccaggatgcagtatcatgcattcgaaccctagcagcagactaccccactcgattcatgacttcagctgccaccggaaatattcctgatcagaaccctattccggttaaccctattcttcctagctctaatccgaccgactctaccgcatcatcatcttggaaggaagaagaaaggacacgttttcaggatactgatgcaaaatctagctcgagaacaaagcggcctaaagcgcattacaaggacgaagaggcccttgtactcagtgcctctctttctcatgtgattcggctaggatggactgaaaccgccatgattgcaggtgcaagggatgtcggagtgtcaccttccattgttggatcatttcctcggaaagaagctgcactagtggagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="121359" stop="119535"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121059" g_stop="120732" g_length="328"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="328" r_length="328" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120731" i_stop="119943" i_length="789">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="119942" g_stop="119835" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="329" r_stop="436" r_length="108" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E233609" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>436</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E233609" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121059" e_stop="120732"/>
          <exon e_start="119942" e_stop="119835"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGATCGGCGGCAAAGAGGTTACTACCGGCGTTTTACCGGCGACGCCAGGATGCAGTATCATGCATTCGAACCCTAGCAGCAGACTACCCCACTCGATTCATGACTTCAGCTGCCACCGGAAATATTCCTGATCAGAACCCTATTCCGGTTAACCCTATTCTTCCTAGCTCTAATCCGACCGACTCTACCGCATCATCATCTTGGAAGGAAGAAGAAAGGACACGTTTTCAGGATACTGATGCAAAATCTAGCTCGAGAACAAAGCGGCCTAAAGCGCATTACAAGGACGAAGAGGCCCTTGTACTCAGTGCCTCTCTTTCTCATGTGGTTTGTTACATTTACTTTCTCTTTCGTTTCTTGTGCAGATATGAAATTTTGGATTTATATGTGTAGATTAATGTGTTGTGTCTTATGTGTTTTTAATTGAATTTATTTGTTGACTTGGTGAAATTGGCTGCATAAATTGATTACTTGACCTTCGAATTTGTTGAACCTGCTGCTGTCTTTCTCCCCGAAGAAATGGGATTGGGACCTTTATGCATTGTGATTCTATTGCCAAACCTCTTTGGCGTAGAAGTAGTTTCTGACAAGTACATTCAGTAATCCAATTGGAAAAGATAAAAAGATAAATTATGAAAAAGTAGTTCCTTTGAAAGTTAATAGAGCTTTCCTGATGAGAGGAAGATAATGCCTTGTAATATAAGGTTCATCTTATATACATACCCAAAGGAAAGTTTTACTTTGGTATGTGGGTATGGAGGAAGATGCTTTCCTATATTATTTTTAGAAAAGATATTTTTACTCTGAGAAATCATTTTCTTGATGGTTTTCCTCTGTTTAATTGGGTATGAAGCCGGTGACTGCCAAGTGTATGGTAAAGAAGAGTATTTGTAAAGGGAATCGACTTCCCAACAAGTGAAGGAAGTCATTGCTCCCTTTTGGTGAAAATATATTCATTGGAGATAACATTTTTCACAATTAGGGCAACCAAACACTGAAAGGATTTCGTCAAGGAAAATTCTTTCCTAAGAACATATTCTGACATACAAACACATATTTTCTATCCCTTCATATATATATCAGGCTTGTAATTGGTGCTGGGTAACTTGTTTGCAGATTCGGCTAGGATGGACTGAAACCGCCATGATTGCAGGTGCAAGGGATGTCGGAGTGTCACCTTCCATTGTTGGATCATTTCCTCGGAAAGAAGCTGCACTAGTGGAG</genome_strand>
        <mrna_strand>TCGATCGGCGGCAAAGAGGTTACTACCGGCGTTTTACCGGCGACGCCAGGATGCAGTATCATGCATTCGAACCCTAGCAGCAGACTACCCCACTCGATTCATGACTTCAGCTGCCACCGGAAATATTCCTGATCAGAACCCTATTCCGGTTAACCCTATTCTTCCTAGCTCTAATCCGACCGACTCTACCGCATCATCATCTTGGAAGGAAGAAGAAAGGACACGTTTTCAGGATACTGATGCAAAATCTAGCTCGAGAACAAAGCGGCCTAAAGCGCATTACAAGGACGAAGAGGCCCTTGTACTCAGTGCCTCTCTTTCTCATGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGGCTAGGATGGACTGAAACCGCCATGATTGCAGGTGCAAGGGATGTCGGAGTGTCACCTTCCATTGTTGGATCATTTCCTCGGAAAGAAGCTGCACTAGTGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E210556" ref_strand="+" ref_description="SGN-E210556 [cLEC-35-H10]">
      <seq>tgatattcatactacactctctctattgaagctccaaaatagttgcgaacaaatcgttgacaatgtatcgatcggcggcaaagaggttactaccggcgttttaccggcgacgccaggatgcagtatcatgcattcgaaccctagcagcagactaccccactcgattcatgacttcagctgccaccggaaatattcctgatcagaaccctattccggttaaccctattcttcctagctctaatccgaccgactctaccgcatcatcatcttggaaggaagaagaaaggacacgttttcaggatactgatgcaaaatctagctcgagaacaaagcgggctaaagcgcattacaaggacgaagaggcccttgtactcagtgcctctctttctcatgtgattcggctaggatggactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="121426" stop="119624"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121126" g_stop="120732" g_length="395"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="395" r_length="395" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120731" i_stop="119943" i_length="789">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="119942" g_stop="119924" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="396" r_stop="414" r_length="19" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E210556" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>414</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E210556" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121126" e_stop="120732"/>
          <exon e_start="119942" e_stop="119924"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATATTCATACTACACTCTCTCTATTGAAGCTCCAAAATAGTTGCGAACAAATCGTTGACAATGTATCGATCGGCGGCAAAGAGGTTACTACCGGCGTTTTACCGGCGACGCCAGGATGCAGTATCATGCATTCGAACCCTAGCAGCAGACTACCCCACTCGATTCATGACTTCAGCTGCCACCGGAAATATTCCTGATCAGAACCCTATTCCGGTTAACCCTATTCTTCCTAGCTCTAATCCGACCGACTCTACCGCATCATCATCTTGGAAGGAAGAAGAAAGGACACGTTTTCAGGATACTGATGCAAAATCTAGCTCGAGAACAAAGCGGCCTAAAGCGCATTACAAGGACGAAGAGGCCCTTGTACTCAGTGCCTCTCTTTCTCATGTGGTTTGTTACATTTACTTTCTCTTTCGTTTCTTGTGCAGATATGAAATTTTGGATTTATATGTGTAGATTAATGTGTTGTGTCTTATGTGTTTTTAATTGAATTTATTTGTTGACTTGGTGAAATTGGCTGCATAAATTGATTACTTGACCTTCGAATTTGTTGAACCTGCTGCTGTCTTTCTCCCCGAAGAAATGGGATTGGGACCTTTATGCATTGTGATTCTATTGCCAAACCTCTTTGGCGTAGAAGTAGTTTCTGACAAGTACATTCAGTAATCCAATTGGAAAAGATAAAAAGATAAATTATGAAAAAGTAGTTCCTTTGAAAGTTAATAGAGCTTTCCTGATGAGAGGAAGATAATGCCTTGTAATATAAGGTTCATCTTATATACATACCCAAAGGAAAGTTTTACTTTGGTATGTGGGTATGGAGGAAGATGCTTTCCTATATTATTTTTAGAAAAGATATTTTTACTCTGAGAAATCATTTTCTTGATGGTTTTCCTCTGTTTAATTGGGTATGAAGCCGGTGACTGCCAAGTGTATGGTAAAGAAGAGTATTTGTAAAGGGAATCGACTTCCCAACAAGTGAAGGAAGTCATTGCTCCCTTTTGGTGAAAATATATTCATTGGAGATAACATTTTTCACAATTAGGGCAACCAAACACTGAAAGGATTTCGTCAAGGAAAATTCTTTCCTAAGAACATATTCTGACATACAAACACATATTTTCTATCCCTTCATATATATATCAGGCTTGTAATTGGTGCTGGGTAACTTGTTTGCAGATTCGGCTAGGATGGACTG</genome_strand>
        <mrna_strand>TGATATTCATACTACACTCTCTCTATTGAAGCTCCAAAATAGTTGCGAACAAATCGTTGACAATGTATCGATCGGCGGCAAAGAGGTTACTACCGGCGTTTTACCGGCGACGCCAGGATGCAGTATCATGCATTCGAACCCTAGCAGCAGACTACCCCACTCGATTCATGACTTCAGCTGCCACCGGAAATATTCCTGATCAGAACCCTATTCCGGTTAACCCTATTCTTCCTAGCTCTAATCCGACCGACTCTACCGCATCATCATCTTGGAAGGAAGAAGAAAGGACACGTTTTCAGGATACTGATGCAAAATCTAGCTCGAGAACAAAGCGGGCTAAAGCGCATTACAAGGACGAAGAGGCCCTTGTACTCAGTGCCTCTCTTTCTCATGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGGCTAGGATGGACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E298837" ref_strand="+" ref_description="SGN-E298837 [cLET-44-J17]">
      <seq>tcgatcggcggcttagaggttactaccggcgttttaccggcgacgccaggatgcagtatcatgcattcgaaccctagcagcagactaccccactcgattcatgacttcagctgccaccggacatattcctgatcagaaccctattccggttaaccctattctttctagctctaatccgaccgactctaccgcatcatcatcttggaaggaagaagaaaggacacgttttcaggatactgatgcataatctagctcgagaacaaagcggcctanagcgcattacaaggacgaagaggcccttgtactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="121359" stop="120453"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121059" g_stop="120753" g_length="307"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="307" r_length="307" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E298837" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>307</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E298837" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121059" e_stop="120753"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGATCGGCGGCAAAGAGGTTACTACCGGCGTTTTACCGGCGACGCCAGGATGCAGTATCATGCATTCGAACCCTAGCAGCAGACTACCCCACTCGATTCATGACTTCAGCTGCCACCGGAAATATTCCTGATCAGAACCCTATTCCGGTTAACCCTATTCTTCCTAGCTCTAATCCGACCGACTCTACCGCATCATCATCTTGGAAGGAAGAAGAAAGGACACGTTTTCAGGATACTGATGCAAAATCTAGCTCGAGAACAAAGCGGCCTAAAGCGCATTACAAGGACGAAGAGGCCCTTGTACTC</genome_strand>
        <mrna_strand>TCGATCGGCGGCTTAGAGGTTACTACCGGCGTTTTACCGGCGACGCCAGGATGCAGTATCATGCATTCGAACCCTAGCAGCAGACTACCCCACTCGATTCATGACTTCAGCTGCCACCGGACATATTCCTGATCAGAACCCTATTCCGGTTAACCCTATTCTTTCTAGCTCTAATCCGACCGACTCTACCGCATCATCATCTTGGAAGGAAGAAGAAAGGACACGTTTTCAGGATACTGATGCATAATCTAGCTCGAGAACAAAGCGGCCTANAGCGCATTACAAGGACGAAGAGGCCCTTGTACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E338296" ref_strand="+" ref_description="SGN-E338296 [cTOE-13-F3]">
      <seq>atctctacgtggagccttttcctgatattcatactacactctctctattgaagctccaaaatagttgcgaacaaatcgttgacaatgtatcgatcggcggcaaagaggttactaccggcgttttaccggcgacgccaggatgcagtatcatgcattcgaaccctagcagcagactaccccactcgattcatgacttcagctgccaccggaaatattcctgatcagaaccctattccggttaaccctattcttcctagctctaatccgaccgactctaccgcatcatcatcttggaaggaagaagaaaggacacgttttcacgatactgatgcaaaatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="121448" stop="120511"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121148" g_stop="120811" g_length="338"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="338" r_length="338" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E338296" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>338</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E338296" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121148" e_stop="120811"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTCTACGTGGAGCCTTTTCCTGATATTCATACTACACTCTCTCTATTGAAGCTCCAAAATAGTTGCGAACAAATCGTTGACAATGTATCGATCGGCGGCAAAGAGGTTACTACCGGCGTTTTACCGGCGACGCCAGGATGCAGTATCATGCATTCGAACCCTAGCAGCAGACTACCCCACTCGATTCATGACTTCAGCTGCCACCGGAAATATTCCTGATCAGAACCCTATTCCGGTTAACCCTATTCTTCCTAGCTCTAATCCGACCGACTCTACCGCATCATCATCTTGGAAGGAAGAAGAAAGGACACGTTTTCAGGATACTGATGCAAAATC</genome_strand>
        <mrna_strand>ATCTCTACGTGGAGCCTTTTCCTGATATTCATACTACACTCTCTCTATTGAAGCTCCAAAATAGTTGCGAACAAATCGTTGACAATGTATCGATCGGCGGCAAAGAGGTTACTACCGGCGTTTTACCGGCGACGCCAGGATGCAGTATCATGCATTCGAACCCTAGCAGCAGACTACCCCACTCGATTCATGACTTCAGCTGCCACCGGAAATATTCCTGATCAGAACCCTATTCCGGTTAACCCTATTCTTCCTAGCTCTAATCCGACCGACTCTACCGCATCATCATCTTGGAAGGAAGAAGAAAGGACACGTTTTCACGATACTGATGCAAAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E309970" ref_strand="+" ref_description="SGN-E309970 [cTOA-4-I3]">
      <seq>ctacactctctctattgaagctccaaaatagttgcgaacaaatcgttggcaatgtatcgttcgggggcaaagaggttactaccggagttttaccggcgacgccaggatgcagtatcatgcattcgaaccctagcagcagactaccccactcgattcatgacttcagctgccaccggaaatattcctgatcagaaccctattccggttaaccctattcttgctagctgtaatccgaccgactctaccgcatgatcatcttggaaggaagaagaaaggacacgttttcaggatactgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0002M15-ohtY0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0002M15.1" temp_strand="-" temp_description="C07HBa0002M15.1  AC210346.1 htgs_phase:2 submitted_to_sgn_as:C07HBa0002M15 upload_account_name:france">
        <position start="121415" stop="120518"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121115" g_stop="120818" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="298" r_length="298" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0002M15.1" gen_strand="-" ref_id="SGN-E309970" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>298</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0002M15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E309970" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121115" e_stop="120818"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACACTCTCTCTATTGAAGCTCCAAAATAGTTGCGAACAAATCGTTGACAATGTATCGATCGGCGGCAAAGAGGTTACTACCGGCGTTTTACCGGCGACGCCAGGATGCAGTATCATGCATTCGAACCCTAGCAGCAGACTACCCCACTCGATTCATGACTTCAGCTGCCACCGGAAATATTCCTGATCAGAACCCTATTCCGGTTAACCCTATTCTTCCTAGCTCTAATCCGACCGACTCTACCGCATCATCATCTTGGAAGGAAGAAGAAAGGACACGTTTTCAGGATACTGATG</genome_strand>
        <mrna_strand>CTACACTCTCTCTATTGAAGCTCCAAAATAGTTGCGAACAAATCGTTGGCAATGTATCGTTCGGGGGCAAAGAGGTTACTACCGGAGTTTTACCGGCGACGCCAGGATGCAGTATCATGCATTCGAACCCTAGCAGCAGACTACCCCACTCGATTCATGACTTCAGCTGCCACCGGAAATATTCCTGATCAGAACCCTATTCCGGTTAACCCTATTCTTGCTAGCTGTAATCCGACCGACTCTACCGCATGATCATCTTGGAAGGAAGAAGAAAGGACACGTTTTCAGGATACTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>65</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="1" PGL_stop="5943"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="1949" e_stop="2140"/>
            <exon e_start="4854" e_stop="4928"/>
            <exon e_start="5032" e_stop="5145"/>
            <exon e_start="5387" e_stop="5943"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.997" e_score="0.958"/>
          <exon-intron don_prob="0.743" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.000" e_score="0.982"/>
          <exon-only e_score="0.935"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.958">
            <gDNA_exon_boundary e_start="1949" e_stop="2140" e_length="192"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.997">
            <gDNA_intron_boundary i_start="2141" i_stop="4853" i_length="2713"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="4854" e_stop="4928" e_length="75"/>
          </exon>
          <intron i_serial="2" don_prob="0.743" acc_prob="0.995">
            <gDNA_intron_boundary i_start="4929" i_stop="5031" i_length="103"/>
          </intron>
          <exon e_serial="3" e_score="0.982">
            <gDNA_exon_boundary e_start="5032" e_stop="5145" e_length="114"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.000">
            <gDNA_intron_boundary i_start="5146" i_stop="5386" i_length="241"/>
          </intron>
          <exon e_serial="4" e_score="0.935">
            <gDNA_exon_boundary e_start="5387" e_stop="5943" e_length="557"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1949" stop="2140"/>
              <exon start="4854" stop="4928"/>
              <exon start="5032" stop="5145"/>
              <exon start="5387" stop="5767"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E692907" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4854" stop="4928"/>
              <exon start="5032" stop="5145"/>
              <exon start="5387" stop="5943"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E696747" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTACCCTTAAATTTTCAATAGGTCTTTCCAACTCCAGTTCCAGACCTTTCATCCAAAGGTCCATTAGTGTTGTCAGGCAGATACCGAGGAGTATTCCCTGACACGCTTAAAGCTAAAGGAGTCCTTGCAGACTTGAGTAACTTCTCCCTGGATCTGAAAGCTATACAGACAAAGGACATACCTCTTGATAAG : GTGTTAGCAAGGCAACAGATTGAACTACTTACTGCTCAGGCCTGGTTGACTGAAAATAAGGACCTTGAACAGAAG : ATAGCACAAACAAGTATACAGAAAGGCGTTATTTCTGAGTATACACGCATGATATTGATAGAGACTGATAAAGGCAAAGTAATCACTGAATCAACCACCAACACCAAGCGAAAG : GTTTCCACTGCTCCTACGAAGATTGAAGAGCCTAAAATACAGAAGGAGACATTGCTACAGAATCTGGGGGCTGGTTTTGGTAACTACAGTGCTACAAATGAAAATATTTCTCCTGGAACCACCGAGACAAAACCTGAGACAGCCGAGTTTCTAGCGAAGGCAGCATCTAATTGTTGTGGAAAGACATGTGAAATATGCTGTTGTATGTGCTGTATACGGACATGTTCGAAAATGAATGATCAATGTGCAATCGTGCTGACACAGTTCCTGGGTTCCTTGGCATGCTTAGGTTGCTTCGCTTGCTGTGAATTATGCTGTTCCGTTAATGATGGATGAGAAAGTTATTGCATAGCTTCCTTGCAATCTTGTTGTATACAGTTTCTTACATAGTACAAGGTTTACATTTTGTGTATCATGGTTTCTTGTGAATAGTATGTATTTATATACATACAAGTTTTACCAATTGCTTTACTGTAATGATGTAGAAATATAACATTTGCATGTTTCATAATCAGAGAAGAATAATGTTAAACTAGACATGATTATTTGCCGGACAA</gDNA_template>
            <first_frame> L  P  L  N  F  Q  *  V  F  P  T  P  V  P  D  L  S  S  K  G  P  L  V  L  S  G  R  Y  R  G  V  F  P  D  T  L  K  A  K  G  V  L  A  D  L  S  N  F  S  L  D  L  K  A  I  Q  T  K  D  I  P  L  D  K  :  V  L  A  R  Q  Q  I  E  L  L  T  A  Q  A  W  L  T  E  N  K  D  L  E  Q  K  :  I  A  Q  T  S  I  Q  K  G  V  I  S  E  Y  T  R  M  I  L  I  E  T  D  K  G  K  V  I  T  E  S  T  T  N  T  K  R  K  :  V  S  T  A  P  T  K  I  E  E  P  K  I  Q  K  E  T  L  L  Q  N  L  G  A  G  F  G  N  Y  S  A  T  N  E  N  I  S  P  G  T  T  E  T  K  P  E  T  A  E  F  L  A  K  A  A  S  N  C  C  G  K  T  C  E  I  C  C  C  M  C  C  I  R  T  C  S  K  M  N  D  Q  C  A  I  V  L  T  Q  F  L  G  S  L  A  C  L  G  C  F  A  C  C  E  L  C  C  S  V  N  D  G  *  E  S  Y  C  I  A  S  L  Q  S  C  C  I  Q  F  L  T  *  Y  K  V  Y  I  L  C  I  M  V  S  C  E  *  Y  V  F  I  Y  I  Q  V  L  P  I  A  L  L  *  *  C  R  N  I  T  F  A  C  F  I  I  R  E  E  *  C  *  T  R  H  D  Y  L  P  D   </first_frame>
            <second_frame>  Y  P  *  I  F  N  R  S  F  Q  L  Q  F  Q  T  F  H  P  K  V  H  *  C  C  Q  A  D  T  E  E  Y  S  L  T  R  L  K  L  K  E  S  L  Q  T  *  V  T  S  P  W  I  *  K  L  Y  R  Q  R  T  Y  L  L  I  R :   C  *  Q  G  N  R  L  N  Y  L  L  L  R  P  G  *  L  K  I  R  T  L  N  R  R :   *  H  K  Q  V  Y  R  K  A  L  F  L  S  I  H  A  *  Y  *  *  R  L  I  K  A  K  *  S  L  N  Q  P  P  T  P  S  E  R :   F  P  L  L  L  R  R  L  K  S  L  K  Y  R  R  R  H  C  Y  R  I  W  G  L  V  L  V  T  T  V  L  Q  M  K  I  F  L  L  E  P  P  R  Q  N  L  R  Q  P  S  F  *  R  R  Q  H  L  I  V  V  E  R  H  V  K  Y  A  V  V  C  A  V  Y  G  H  V  R  K  *  M  I  N  V  Q  S  C  *  H  S  S  W  V  P  W  H  A  *  V  A  S  L  A  V  N  Y  A  V  P  L  M  M  D  E  K  V  I  A  *  L  P  C  N  L  V  V  Y  S  F  L  H  S  T  R  F  T  F  C  V  S  W  F  L  V  N  S  M  Y  L  Y  T  Y  K  F  Y  Q  L  L  Y  C  N  D  V  E  I  *  H  L  H  V  S  *  S  E  K  N  N  V  K  L  D  M  I  I  C  R  T  </second_frame>
            <third_frame>   T  L  K  F  S  I  G  L  S  N  S  S  S  R  P  F  I  Q  R  S  I  S  V  V  R  Q  I  P  R  S  I  P  *  H  A  *  S  *  R  S  P  C  R  L  E  *  L  L  P  G  S  E  S  Y  T  D  K  G  H  T  S  *  *   : G  V  S  K  A  T  D  *  T  T  Y  C  S  G  L  V  D  *  K  *  G  P  *  T  E   : D  S  T  N  K  Y  T  E  R  R  Y  F  *  V  Y  T  H  D  I  D  R  D  *  *  R  Q  S  N  H  *  I  N  H  Q  H  Q  A  K   : G  F  H  C  S  Y  E  D  *  R  A  *  N  T  E  G  D  I  A  T  E  S  G  G  W  F  W  *  L  Q  C  Y  K  *  K  Y  F  S  W  N  H  R  D  K  T  *  D  S  R  V  S  S  E  G  S  I  *  L  L  W  K  D  M  *  N  M  L  L  Y  V  L  Y  T  D  M  F  E  N  E  *  S  M  C  N  R  A  D  T  V  P  G  F  L  G  M  L  R  L  L  R  L  L  *  I  M  L  F  R  *  *  W  M  R  K  L  L  H  S  F  L  A  I  L  L  Y  T  V  S  Y  I  V  Q  G  L  H  F  V  Y  H  G  F  L  *  I  V  C  I  Y  I  H  T  S  F  T  N  C  F  T  V  M  M  *  K  Y  N  I  C  M  F  H  N  Q  R  R  I  M  L  N  *  T  *  L  F  A  G  Q </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002M15.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="1970" stop="2140"/>
                    <exon start="4854" stop="4928"/>
                    <exon start="5032" stop="5145"/>
                    <exon start="5387" stop="5722"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>693</number_coding_nucleotides>
                  <number_encoded_amino_acids>231</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VFPTPVPDLSSKGPLVLSGRYRGVFPDTLKAKGVLADLSNFSLDLKAIQTKDIPLDKVLARQQIELLTAQAWLTENKDLEQKIAQTSIQKGVISEYTRMILIETDKGKVITESTTNTKRKVSTAPTKIEEPKIQKETLLQNLGAGFGNYSATNENISPGTTETKPETAEFLAKAASNCCGKTCEICCCMCCIRTCSKMNDQCAIVLTQFLGSLACLGCFACCELCCSVNDG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="1" e_stop="171"/>
            <exon e_start="754" e_stop="910"/>
            <exon e_start="1295" e_stop="1372"/>
            <exon e_start="1611" e_stop="1711"/>
            <exon e_start="1970" e_stop="2002"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.946" e_score="0.977"/>
          <exon-intron don_prob="0.000" acc_prob="0.977" e_score="0.955"/>
          <exon-intron don_prob="0.885" acc_prob="0.994" e_score="0.987"/>
          <exon-intron don_prob="0.998" acc_prob="0.935" e_score="0.941"/>
          <exon-only e_score="0.939"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.977">
            <gDNA_exon_boundary e_start="1" e_stop="171" e_length="171"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.946">
            <gDNA_intron_boundary i_start="172" i_stop="753" i_length="582"/>
          </intron>
          <exon e_serial="2" e_score="0.955">
            <gDNA_exon_boundary e_start="754" e_stop="910" e_length="157"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.977">
            <gDNA_intron_boundary i_start="911" i_stop="1294" i_length="384"/>
          </intron>
          <exon e_serial="3" e_score="0.987">
            <gDNA_exon_boundary e_start="1295" e_stop="1372" e_length="78"/>
          </exon>
          <intron i_serial="3" don_prob="0.885" acc_prob="0.994">
            <gDNA_intron_boundary i_start="1373" i_stop="1610" i_length="238"/>
          </intron>
          <exon e_serial="4" e_score="0.941">
            <gDNA_exon_boundary e_start="1611" e_stop="1711" e_length="101"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.935">
            <gDNA_intron_boundary i_start="1712" i_stop="1969" i_length="258"/>
          </intron>
          <exon e_serial="5" e_score="0.939">
            <gDNA_exon_boundary e_start="1970" e_stop="2002" e_length="33"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1" stop="171"/>
              <exon start="754" stop="910"/>
              <exon start="1295" stop="1372"/>
              <exon start="1611" stop="1711"/>
              <exon start="1970" stop="2002"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E582660" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGCTTGATTCTCAAGATCTGTTCAATATAATAGCTTTCAACAACGAAAAATATCTATTTTCATCATCACTCGAGTTGGCAACCAAGAAGGCTATTGAAAACGCAACTCAGTGGATTGGAACGAATTTTATTGCTGGTGGTGGCACAAATATTTTGAATCCATTGACTCAG : GCCATGGAGATGTTTTCCTATACCCAGCAACACATTCCAATGATTTTCCTGGTCACTGATGGAGCTGTTGAAGATGAAAGACACATCTGTGATGTTCTGAAGAGTCATCTGATGCAAAAACAAATGATATGCCCGCGGCTTTACGCATTTGGCATAG : GATTGTTCTGCAACCATTACTTTCTCCGCATGCTTGCAATGATGAGTCGTGGCCACTATAATGCTGCTTATGATGTTG : ATTCTATTGAAGTTCGCGTTGAACAGCTGTTCTCCAGGGCATCATCTGTCATTCTTGCGGATATTGCCTTTGAGAACCTTGATGGTCTTGAAGAATTTGAG : GTCTTTCCAACTCCAGTTCCAGACCTTTCATCC</gDNA_template>
            <first_frame> K  L  D  S  Q  D  L  F  N  I  I  A  F  N  N  E  K  Y  L  F  S  S  S  L  E  L  A  T  K  K  A  I  E  N  A  T  Q  W  I  G  T  N  F  I  A  G  G  G  T  N  I  L  N  P  L  T  Q  :  A  M  E  M  F  S  Y  T  Q  Q  H  I  P  M  I  F  L  V  T  D  G  A  V  E  D  E  R  H  I  C  D  V  L  K  S  H  L  M  Q  K  Q  M  I  C  P  R  L  Y  A  F  G  I   : G  L  F  C  N  H  Y  F  L  R  M  L  A  M  M  S  R  G  H  Y  N  A  A  Y  D  V   : D  S  I  E  V  R  V  E  Q  L  F  S  R  A  S  S  V  I  L  A  D  I  A  F  E  N  L  D  G  L  E  E  F  E  :  V  F  P  T  P  V  P  D  L  S  S </first_frame>
            <second_frame>  S  L  I  L  K  I  C  S  I  *  *  L  S  T  T  K  N  I  Y  F  H  H  H  S  S  W  Q  P  R  R  L  L  K  T  Q  L  S  G  L  E  R  I  L  L  L  V  V  A  Q  I  F  *  I  H  *  L  R :   P  W  R  C  F  P  I  P  S  N  T  F  Q  *  F  S  W  S  L  M  E  L  L  K  M  K  D  T  S  V  M  F  *  R  V  I  *  C  K  N  K  *  Y  A  R  G  F  T  H  L  A  *  :  D  C  S  A  T  I  T  F  S  A  C  L  Q  *  *  V  V  A  T  I  M  L  L  M  M  L  :  I  L  L  K  F  A  L  N  S  C  S  P  G  H  H  L  S  F  L  R  I  L  P  L  R  T  L  M  V  L  K  N  L  R :   S  F  Q  L  Q  F  Q  T  F  H   </second_frame>
            <third_frame>   A  *  F  S  R  S  V  Q  Y  N  S  F  Q  Q  R  K  I  S  I  F  I  I  T  R  V  G  N  Q  E  G  Y  *  K  R  N  S  V  D  W  N  E  F  Y  C  W  W  W  H  K  Y  F  E  S  I  D  S   : G  H  G  D  V  F  L  Y  P  A  T  H  S  N  D  F  P  G  H  *  W  S  C  *  R  *  K  T  H  L  *  C  S  E  E  S  S  D  A  K  T  N  D  M  P  A  A  L  R  I  W  H  R :   I  V  L  Q  P  L  L  S  P  H  A  C  N  D  E  S  W  P  L  *  C  C  L  *  C  * :   F  Y  *  S  S  R  *  T  A  V  L  Q  G  I  I  C  H  S  C  G  Y  C  L  *  E  P  *  W  S  *  R  I  *   : G  L  S  N  S  S  S  R  P  F  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002M15.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="1" stop="171"/>
                    <exon start="754" stop="910"/>
                    <exon start="1295" stop="1372"/>
                    <exon start="1611" stop="1711"/>
                    <exon start="1970" stop="2002"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>540</number_coding_nucleotides>
                  <number_encoded_amino_acids>180</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KLDSQDLFNIIAFNNEKYLFSSSLELATKKAIENATQWIGTNFIAGGGTNILNPLTQAMEMFSYTQQHIPMIFLVTDGAVEDERHICDVLKSHLMQKQMICPRLYAFGIGLFCNHYFLRMLAMMSRGHYNAAYDVDSIEVRVEQLFSRASSVILADIAFENLDGLEEFEVFPTPVPDLSS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="30450" PGL_stop="29724"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="30450" e_stop="29724"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.947"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.947">
            <gDNA_exon_boundary e_start="30450" e_stop="29724" e_length="727"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30450" stop="29965"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367110" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30024" stop="29724"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245978" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTACCCACAATACACCCGCAACCACTACCCACATTCACAACCAACCCGAACCACCCCATACCCACAACATCTCCAGACCGATCCGTTTTGGGTCCTTCCCGGCCACCCCCGAATCACCACCGCCCGTGCCACCCCCCCAATACTCATCCATGTTAACCCGTGACAAAGCCGGTATCTTTAAACCCAAAACCTTTCAGGCTACCATACTACCAAATACACCCCTTCCCGATAGTGAACCAACAACCTACTCTGTTGCCTCAAAAAATGCTTATTGACGTCATGCTATAGATGACGAGTTTAAGGCTTTGACTGATCAGAAAACTGGGGTTCTTGTACCTAAGCCCCATAGGCGGCACCCAGTGGGTTGTATATGGGTATACAAAATTAAACACAATGCAGATGGTAGTATTTCCAGGTACAAGGCTCGTTTGGTTGCTAAAGGCTACAATCAGGAGTATGGGCTTGATTACTCCGAGACATTGAGTCCTGTTATTTGGCAAGAAACCATTCGCCTAATACTGTCACTCGCCGTGCGCAACAATTGGCTCATCAATCAGTTGGATGTTTCCAATGCTTTTCTTCATGGCATGCTTGATGAAACTATCTACATGACGCAACCACCGGGCTGTGTTGATCCCCGCTTCCCTCAACATGTTTGCAAACTTCAGAAGTCTCTGTATGGTCTCAAGCAAGCCCCCCGTGATTGGTACACACGTCTGAAAATGTT</gDNA_template>
            <first_frame> L  P  T  I  H  P  Q  P  L  P  T  F  T  T  N  P  N  H  P  I  P  T  T  S  P  D  R  S  V  L  G  P  S  R  P  P  P  N  H  H  R  P  C  H  P  P  N  T  H  P  C  *  P  V  T  K  P  V  S  L  N  P  K  P  F  R  L  P  Y  Y  Q  I  H  P  F  P  I  V  N  Q  Q  P  T  L  L  P  Q  K  M  L  I  D  V  M  L  *  M  T  S  L  R  L  *  L  I  R  K  L  G  F  L  Y  L  S  P  I  G  G  T  Q  W  V  V  Y  G  Y  T  K  L  N  T  M  Q  M  V  V  F  P  G  T  R  L  V  W  L  L  K  A  T  I  R  S  M  G  L  I  T  P  R  H  *  V  L  L  F  G  K  K  P  F  A  *  Y  C  H  S  P  C  A  T  I  G  S  S  I  S  W  M  F  P  M  L  F  F  M  A  C  L  M  K  L  S  T  *  R  N  H  R  A  V  L  I  P  A  S  L  N  M  F  A  N  F  R  S  L  C  M  V  S  S  K  P  P  V  I  G  T  H  V  *  K  C  </first_frame>
            <second_frame>  Y  P  Q  Y  T  R  N  H  Y  P  H  S  Q  P  T  R  T  T  P  Y  P  Q  H  L  Q  T  D  P  F  W  V  L  P  G  H  P  R  I  T  T  A  R  A  T  P  P  I  L  I  H  V  N  P  *  Q  S  R  Y  L  *  T  Q  N  L  S  G  Y  H  T  T  K  Y  T  P  S  R  *  *  T  N  N  L  L  C  C  L  K  K  C  L  L  T  S  C  Y  R  *  R  V  *  G  F  D  *  S  E  N  W  G  S  C  T  *  A  P  *  A  A  P  S  G  L  Y  M  G  I  Q  N  *  T  Q  C  R  W  *  Y  F  Q  V  Q  G  S  F  G  C  *  R  L  Q  S  G  V  W  A  *  L  L  R  D  I  E  S  C  Y  L  A  R  N  H  S  P  N  T  V  T  R  R  A  Q  Q  L  A  H  Q  S  V  G  C  F  Q  C  F  S  S  W  H  A  *  *  N  Y  L  H  D  A  T  T  G  L  C  *  S  P  L  P  S  T  C  L  Q  T  S  E  V  S  V  W  S  Q  A  S  P  P  *  L  V  H  T  S  E  N  V </second_frame>
            <third_frame>   T  H  N  T  P  A  T  T  T  H  I  H  N  Q  P  E  P  P  H  T  H  N  I  S  R  P  I  R  F  G  S  F  P  A  T  P  E  S  P  P  P  V  P  P  P  Q  Y  S  S  M  L  T  R  D  K  A  G  I  F  K  P  K  T  F  Q  A  T  I  L  P  N  T  P  L  P  D  S  E  P  T  T  Y  S  V  A  S  K  N  A  Y  *  R  H  A  I  D  D  E  F  K  A  L  T  D  Q  K  T  G  V  L  V  P  K  P  H  R  R  H  P  V  G  C  I  W  V  Y  K  I  K  H  N  A  D  G  S  I  S  R  Y  K  A  R  L  V  A  K  G  Y  N  Q  E  Y  G  L  D  Y  S  E  T  L  S  P  V  I  W  Q  E  T  I  R  L  I  L  S  L  A  V  R  N  N  W  L  I  N  Q  L  D  V  S  N  A  F  L  H  G  M  L  D  E  T  I  Y  M  T  Q  P  P  G  C  V  D  P  R  F  P  Q  H  V  C  K  L  Q  K  S  L  Y  G  L  K  Q  A  P  R  D  W  Y  T  R  L  K  M   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002M15.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="30175" stop="29726"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>450</number_coding_nucleotides>
                  <number_encoded_amino_acids>150</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RHAIDDEFKALTDQKTGVLVPKPHRRHPVGCIWVYKIKHNADGSISRYKARLVAKGYNQEYGLDYSETLSPVIWQETIRLILSLAVRNNWLINQLDVSNAFLHGMLDETIYMTQPPGCVDPRFPQHVCKLQKSLYGLKQAPRDWYTRLKM</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002M15.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="30448" stop="30176"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>270</number_coding_nucleotides>
                  <number_encoded_amino_acids>90</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>THNTPATTTHIHNQPEPPHTHNISRPIRFGSFPATPESPPPVPPPQYSSMLTRDKAGIFKPKTFQATILPNTPLPDSEPTTYSVASKNAY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="41678" PGL_stop="42061"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="41678" e_stop="42061"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.909"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.909">
            <gDNA_exon_boundary e_start="41678" e_stop="42061" e_length="384"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41678" stop="42061"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338242" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTATAACACGTTATCAGCACGAGTCTCTATCTAATTGAGAGTGAGTTCTTGTTTTTCTTTAGCTCATATTTTGGTTGATCTCGTTATGAAGATCAAAGTATTATATGCATAAAATCAGGTATGTATTTTCTAAAATATTTTATGATTTAGAATAAAATAGTGTTCACTCACTAAAAATTATCAGGAACCGAAGACATATACTACTATTGGTTGAATAAGACATGCTATACAAAACTTCTTAAATGAAGAAGGTATAAAATTTTAATAGCATGAGTTTGAATATTATTTTGATTGTTTTGAAAGACTCGAAGAATAAATCATGTTGTACTTCGATTTATTATACCGTTGGCTAAGGGTAAGACTATGGATTCAAGTTTCATCG</gDNA_template>
            <first_frame> F  Y  N  T  L  S  A  R  V  S  I  *  L  R  V  S  S  C  F  S  L  A  H  I  L  V  D  L  V  M  K  I  K  V  L  Y  A  *  N  Q  V  C  I  F  *  N  I  L  *  F  R  I  K  *  C  S  L  T  K  N  Y  Q  E  P  K  T  Y  T  T  I  G  *  I  R  H  A  I  Q  N  F  L  N  E  E  G  I  K  F  *  *  H  E  F  E  Y  Y  F  D  C  F  E  R  L  E  E  *  I  M  L  Y  F  D  L  L  Y  R  W  L  R  V  R  L  W  I  Q  V  S  S </first_frame>
            <second_frame>  F  I  T  R  Y  Q  H  E  S  L  S  N  *  E  *  V  L  V  F  L  *  L  I  F  W  L  I  S  L  *  R  S  K  Y  Y  M  H  K  I  R  Y  V  F  S  K  I  F  Y  D  L  E  *  N  S  V  H  S  L  K  I  I  R  N  R  R  H  I  L  L  L  V  E  *  D  M  L  Y  K  T  S  *  M  K  K  V  *  N  F  N  S  M  S  L  N  I  I  L  I  V  L  K  D  S  K  N  K  S  C  C  T  S  I  Y  Y  T  V  G  *  G  *  D  Y  G  F  K  F  H   </second_frame>
            <third_frame>   L  *  H  V  I  S  T  S  L  Y  L  I  E  S  E  F  L  F  F  F  S  S  Y  F  G  *  S  R  Y  E  D  Q  S  I  I  C  I  K  S  G  M  Y  F  L  K  Y  F  M  I  *  N  K  I  V  F  T  H  *  K  L  S  G  T  E  D  I  Y  Y  Y  W  L  N  K  T  C  Y  T  K  L  L  K  *  R  R  Y  K  I  L  I  A  *  V  *  I  L  F  *  L  F  *  K  T  R  R  I  N  H  V  V  L  R  F  I  I  P  L  A  K  G  K  T  M  D  S  S  F  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0002M15.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="42122" PGL_stop="42956"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="42122" e_stop="42956"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.931"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.931">
            <gDNA_exon_boundary e_start="42122" e_stop="42956" e_length="835"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42122" stop="42901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354965" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42281" stop="42956"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542836" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42586" stop="42939"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204533" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GATAAGACGATAGATTCAAGTTCTATCACACCAAAAAGGGTAAGACATCAATTAGAATTTTGATGCATCGTGATTGGGTTCAAGTCCCATAGAATTATGGCGTAACACACCTTATATGGGTAAGACATTGAGTTTGAACCAATGCACCATAGCGATGATAAAATGATGACTAAGAAAAATAATATATTTTTGATGAAATGTCTTGAAATTCATCATATTGAATTTGCTCCATTCCTTTAAAAGAATGTGGTAGCAACATGTGATAACTCTAAAATTCACCTATTGACTTGCTCCATTCAATCATATGAATGTGGGTAGCAGTGAATGATTAGTCTGAAAGATGATAAATAATTAATGATATGAATAAGGGCGTGGAGGGACAGAATTATAATAGTCATCATTGTGGTAATAATAAAAGGAAGAACACTATGAGTTCTTCAAATAGTCCTTCAAAATGTGAAGACAATTTTTATTATCAAAATGGTACGAAAGGCCATTAGACTTGTGAATGTTGTCAACCCAATAATTTGATAAGTTTATAAATCCTCTATCATGATACAAGAAGATAAAGTGATGGTACACTTAATCTTTCAAATTGATGTTGAGGTGTGTCATGGAAATATGATTAATTTTAAAGCCATGACAATGTGCTTATAATACAAATTTATGAAGTACATATAAATAATTAGTCCATTCCTTGAAGAGAATGTGACTTGTGATGAGTATCGTGAATGTTCGATCATTCTATAAGAGAATGGGTCCAGATGTGATAAAATCATTATGGGTTGGATATATTCCACAACTCACCTCTATGGAAGGTTTGAGAAAAAATGAT</gDNA_template>
            <first_frame> D  K  T  I  D  S  S  S  I  T  P  K  R  V  R  H  Q  L  E  F  *  C  I  V  I  G  F  K  S  H  R  I  M  A  *  H  T  L  Y  G  *  D  I  E  F  E  P  M  H  H  S  D  D  K  M  M  T  K  K  N  N  I  F  L  M  K  C  L  E  I  H  H  I  E  F  A  P  F  L  *  K  N  V  V  A  T  C  D  N  S  K  I  H  L  L  T  C  S  I  Q  S  Y  E  C  G  *  Q  *  M  I  S  L  K  D  D  K  *  L  M  I  *  I  R  A  W  R  D  R  I  I  I  V  I  I  V  V  I  I  K  G  R  T  L  *  V  L  Q  I  V  L  Q  N  V  K  T  I  F  I  I  K  M  V  R  K  A  I  R  L  V  N  V  V  N  P  I  I  *  *  V  Y  K  S  S  I  M  I  Q  E  D  K  V  M  V  H  L  I  F  Q  I  D  V  E  V  C  H  G  N  M  I  N  F  K  A  M  T  M  C  L  *  Y  K  F  M  K  Y  I  *  I  I  S  P  F  L  E  E  N  V  T  C  D  E  Y  R  E  C  S  I  I  L  *  E  N  G  S  R  C  D  K  I  I  M  G  W  I  Y  S  T  T  H  L  Y  G  R  F  E  K  K  *  </first_frame>
            <second_frame>  I  R  R  *  I  Q  V  L  S  H  Q  K  G  *  D  I  N  *  N  F  D  A  S  *  L  G  S  S  P  I  E  L  W  R  N  T  P  Y  M  G  K  T  L  S  L  N  Q  C  T  I  A  M  I  K  *  *  L  R  K  I  I  Y  F  *  *  N  V  L  K  F  I  I  L  N  L  L  H  S  F  K  R  M  W  *  Q  H  V  I  T  L  K  F  T  Y  *  L  A  P  F  N  H  M  N  V  G  S  S  E  *  L  V  *  K  M  I  N  N  *  *  Y  E  *  G  R  G  G  T  E  L  *  *  S  S  L  W  *  *  *  K  E  E  H  Y  E  F  F  K  *  S  F  K  M  *  R  Q  F  L  L  S  K  W  Y  E  R  P  L  D  L  *  M  L  S  T  Q  *  F  D  K  F  I  N  P  L  S  *  Y  K  K  I  K  *  W  Y  T  *  S  F  K  L  M  L  R  C  V  M  E  I  *  L  I  L  K  P  *  Q  C  A  Y  N  T  N  L  *  S  T  Y  K  *  L  V  H  S  L  K  R  M  *  L  V  M  S  I  V  N  V  R  S  F  Y  K  R  M  G  P  D  V  I  K  S  L  W  V  G  Y  I  P  Q  L  T  S  M  E  G  L  R  K  N  D </second_frame>
            <third_frame>   *  D  D  R  F  K  F  Y  H  T  K  K  G  K  T  S  I  R  I  L  M  H  R  D  W  V  Q  V  P  *  N  Y  G  V  T  H  L  I  W  V  R  H  *  V  *  T  N  A  P  *  R  *  *  N  D  D  *  E  K  *  Y  I  F  D  E  M  S  *  N  S  S  Y  *  I  C  S  I  P  L  K  E  C  G  S  N  M  *  *  L  *  N  S  P  I  D  L  L  H  S  I  I  *  M  W  V  A  V  N  D  *  S  E  R  *  *  I  I  N  D  M  N  K  G  V  E  G  Q  N  Y  N  S  H  H  C  G  N  N  K  R  K  N  T  M  S  S  S  N  S  P  S  K  C  E  D  N  F  Y  Y  Q  N  G  T  K  G  H  *  T  C  E  C  C  Q  P  N  N  L  I  S  L  *  I  L  Y  H  D  T  R  R  *  S  D  G  T  L  N  L  S  N  *  C  *  G  V  S  W  K  Y  D  *  F  *  S  H  D  N  V  L  I  I  Q  I  Y  E  V  H  I  N  N  *  S  I  P  *  R  E  C  D  L  *  *  V  S  *  M  F  D  H  S  I  R  E  W  V  Q  M  *  *  N  H  Y  G  L  D  I  F  H  N  S  P  L  W  K  V  *  E  K  M   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0002M15.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="45078" PGL_stop="44405"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="45078" e_stop="44405"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.927"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.927">
            <gDNA_exon_boundary e_start="45078" e_stop="44405" e_length="674"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45078" stop="44405"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273497" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45078" stop="44677"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273387" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCAGACACCTCGATTGTTTCAAAGATTTTCATATAACCTTCATTGTCTATCTAGACATTACAATTATTCATTACATGCATTCAAGTATTCATATGTTGCCAGATCAAAACAAACCTTATTGCATCCAACAAAGGAGAAAACATCTCCAATAATGTCAGGATTTTTGCGATAAACCTTTATGCCCCAAGGCACAAATCGTATTTGATATCTTACGGTTATTCTATCGCATAATAATTTATATTTACCCCACTGACATTATACCTTGATTTATAGACTACCAGTCCAAAATGTCACTTTTCTAAGTGAAACAAAATATACTTGAATTGTGCATTTTACTTGGCCAACCATTTATCTGTCCACACTATATGACAGATTTGAATTCAAGATCCTTGTCACAATTTATATCATTCAGCGCTACCTCATATCAAAGTTACCGTCACGGTTATTTGATATCCATTCCAACAAGACATAACTTATCGAGATCTCTTCATTTTTCATTATTTCAGGTACCTGAACCTTTTTCAAGATTTTATGAAGTGTTATGTCAATGTGCTCCTTTATAGCACTTGTCTCATTATCATGACCATATTGATCATTTGTTCCTTCCTTCTTCAAGGAATTTTATATTTGGAATCAATTGGTCTATTACACTTCCGGCGTATCATAGACTCTG</gDNA_template>
            <first_frame> F  R  H  L  D  C  F  K  D  F  H  I  T  F  I  V  Y  L  D  I  T  I  I  H  Y  M  H  S  S  I  H  M  L  P  D  Q  N  K  P  Y  C  I  Q  Q  R  R  K  H  L  Q  *  C  Q  D  F  C  D  K  P  L  C  P  K  A  Q  I  V  F  D  I  L  R  L  F  Y  R  I  I  I  Y  I  Y  P  T  D  I  I  P  *  F  I  D  Y  Q  S  K  M  S  L  F  *  V  K  Q  N  I  L  E  L  C  I  L  L  G  Q  P  F  I  C  P  H  Y  M  T  D  L  N  S  R  S  L  S  Q  F  I  S  F  S  A  T  S  Y  Q  S  Y  R  H  G  Y  L  I  S  I  P  T  R  H  N  L  S  R  S  L  H  F  S  L  F  Q  V  P  E  P  F  S  R  F  Y  E  V  L  C  Q  C  A  P  L  *  H  L  S  H  Y  H  D  H  I  D  H  L  F  L  P  S  S  R  N  F  I  F  G  I  N  W  S  I  T  L  P  A  Y  H  R  L   </first_frame>
            <second_frame>  S  D  T  S  I  V  S  K  I  F  I  *  P  S  L  S  I  *  T  L  Q  L  F  I  T  C  I  Q  V  F  I  C  C  Q  I  K  T  N  L  I  A  S  N  K  G  E  N  I  S  N  N  V  R  I  F  A  I  N  L  Y  A  P  R  H  K  S  Y  L  I  S  Y  G  Y  S  I  A  *  *  F  I  F  T  P  L  T  L  Y  L  D  L  *  T  T  S  P  K  C  H  F  S  K  *  N  K  I  Y  L  N  C  A  F  Y  L  A  N  H  L  S  V  H  T  I  *  Q  I  *  I  Q  D  P  C  H  N  L  Y  H  S  A  L  P  H  I  K  V  T  V  T  V  I  *  Y  P  F  Q  Q  D  I  T  Y  R  D  L  F  I  F  H  Y  F  R  Y  L  N  L  F  Q  D  F  M  K  C  Y  V  N  V  L  L  Y  S  T  C  L  I  I  M  T  I  L  I  I  C  S  F  L  L  Q  G  I  L  Y  L  E  S  I  G  L  L  H  F  R  R  I  I  D  S  </second_frame>
            <third_frame>   Q  T  P  R  L  F  Q  R  F  S  Y  N  L  H  C  L  S  R  H  Y  N  Y  S  L  H  A  F  K  Y  S  Y  V  A  R  S  K  Q  T  L  L  H  P  T  K  E  K  T  S  P  I  M  S  G  F  L  R  *  T  F  M  P  Q  G  T  N  R  I  *  Y  L  T  V  I  L  S  H  N  N  L  Y  L  P  H  *  H  Y  T  L  I  Y  R  L  P  V  Q  N  V  T  F  L  S  E  T  K  Y  T  *  I  V  H  F  T  W  P  T  I  Y  L  S  T  L  Y  D  R  F  E  F  K  I  L  V  T  I  Y  I  I  Q  R  Y  L  I  S  K  L  P  S  R  L  F  D  I  H  S  N  K  T  *  L  I  E  I  S  S  F  F  I  I  S  G  T  *  T  F  F  K  I  L  *  S  V  M  S  M  C  S  F  I  A  L  V  S  L  S  *  P  Y  *  S  F  V  P  S  F  F  K  E  F  Y  I  W  N  Q  L  V  Y  Y  T  S  G  V  S  *  T  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002M15.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="44775" stop="44515"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>258</number_coding_nucleotides>
                  <number_encoded_amino_acids>86</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VKQNILELCILLGQPFICPHYMTDLNSRSLSQFISFSATSYQSYRHGYLISIPTRHNLSRSLHFSLFQVPEPFSRFYEVLCQCAPL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002M15.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="44627" stop="44406"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YPFQQDITYRDLFIFHYFRYLNLFQDFMKCYVNVLLYSTCLIIMTILIICSFLLQGILYLESIGLLHFRRIIDS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="44685" PGL_stop="45499"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="44685" e_stop="45499"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.945"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.945">
            <gDNA_exon_boundary e_start="44685" e_stop="45499" e_length="815"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44685" stop="45361"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391540" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44686" stop="45239"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205808" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44690" stop="45142"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202657" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44734" stop="45315"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267707" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45091" stop="45499"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289962" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACAAGGATCTTGAATTCAAATCTGTCATATAGTGTGGACAGATAAATGGTTGGCCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGGTAGTCTATAAATCAAGGTATAATGTCAGTGGGGTAAATATAAATTATTATGCGATAGAATAACCGTAAGATATCAAATACGATTTGTGCCTTGGGGCATAAAGGTTTATCGCAAAAATCCTGACATTATTGGAGATGTTTTCTCCTTTGTTGGATGCAATAAGGTTTGTTTTGATCTGGCAACATATGAATACTTGAATGCATGTAATGAATAATTGTAATGTCTAGATAGACAATGAAGGTTATATGAAAATCTTTGAAACAATCGAGGTGTCTGAAGCATATAAGAGTTTGAAAGAAACTTTTCCAATAAAGCTTCAAGAATCCTTATATGAATTGAAATAGTCAAGGAAGAAAAAGGGTACAAAAGAATGACCCTAATTGTCCTTGTATTTTTATGAAAATGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAAATTGATAATTTGACAAATGAAATATTTGTCTAACAGTGCATATACACTGAAAAGTTTTGATGCAATTTTATATGGATAAATTACATTCATTAAGTACCCCAATGATTATGATATCACTTGAGATAAATGATGATTCAATTTGATCTCAAAAGAAGGATGAAGAGTTTCTTGGTGATGAAACTCTATCTTGGTGCAATCAGGGCACTAGTGCATCTTACTAACAATATTTGACTAGATATTTCTTTTGCAGTAAATTTACT</gDNA_template>
            <first_frame> T  R  I  L  N  S  N  L  S  Y  S  V  D  R  *  M  V  G  Q  V  K  C  T  I  Q  V  Y  F  V  S  L  R  K  V  T  F  W  T  G  S  L  *  I  K  V  *  C  Q  W  G  K  Y  K  L  L  C  D  R  I  T  V  R  Y  Q  I  R  F  V  P  W  G  I  K  V  Y  R  K  N  P  D  I  I  G  D  V  F  S  F  V  G  C  N  K  V  C  F  D  L  A  T  Y  E  Y  L  N  A  C  N  E  *  L  *  C  L  D  R  Q  *  R  L  Y  E  N  L  *  N  N  R  G  V  *  S  I  *  E  F  E  R  N  F  S  N  K  A  S  R  I  L  I  *  I  E  I  V  K  E  E  K  G  Y  K  R  M  T  L  I  V  L  V  F  L  *  K  C  L  G  K  T  K  F  C  L  D  L  Q  I  D  N  L  T  N  E  I  F  V  *  Q  C  I  Y  T  E  K  F  *  C  N  F  I  W  I  N  Y  I  H  *  V  P  Q  *  L  *  Y  H  L  R  *  M  M  I  Q  F  D  L  K  R  R  M  K  S  F  L  V  M  K  L  Y  L  G  A  I  R  A  L  V  H  L  T  N  N  I  *  L  D  I  S  F  A  V  N  L   </first_frame>
            <second_frame>  Q  G  S  *  I  Q  I  C  H  I  V  W  T  D  K  W  L  A  K  *  N  A  Q  F  K  Y  I  L  F  H  L  E  K  *  H  F  G  L  V  V  Y  K  S  R  Y  N  V  S  G  V  N  I  N  Y  Y  A  I  E  *  P  *  D  I  K  Y  D  L  C  L  G  A  *  R  F  I  A  K  I  L  T  L  L  E  M  F  S  P  L  L  D  A  I  R  F  V  L  I  W  Q  H  M  N  T  *  M  H  V  M  N  N  C  N  V  *  I  D  N  E  G  Y  M  K  I  F  E  T  I  E  V  S  E  A  Y  K  S  L  K  E  T  F  P  I  K  L  Q  E  S  L  Y  E  L  K  *  S  R  K  K  K  G  T  K  E  *  P  *  L  S  L  Y  F  Y  E  N  V  L  V  R  Q  N  F  V  L  T  Y  K  L  I  I  *  Q  M  K  Y  L  S  N  S  A  Y  T  L  K  S  F  D  A  I  L  Y  G  *  I  T  F  I  K  Y  P  N  D  Y  D  I  T  *  D  K  *  *  F  N  L  I  S  K  E  G  *  R  V  S  W  *  *  N  S  I  L  V  Q  S  G  H  *  C  I  L  L  T  I  F  D  *  I  F  L  L  Q  *  I  Y  </second_frame>
            <third_frame>   K  D  L  E  F  K  S  V  I  *  C  G  Q  I  N  G  W  P  S  K  M  H  N  S  S  I  F  C  F  T  *  K  S  D  I  L  D  W  *  S  I  N  Q  G  I  M  S  V  G  *  I  *  I  I  M  R  *  N  N  R  K  I  S  N  T  I  C  A  L  G  H  K  G  L  S  Q  K  S  *  H  Y  W  R  C  F  L  L  C  W  M  Q  *  G  L  F  *  S  G  N  I  *  I  L  E  C  M  *  *  I  I  V  M  S  R  *  T  M  K  V  I  *  K  S  L  K  Q  S  R  C  L  K  H  I  R  V  *  K  K  L  F  Q  *  S  F  K  N  P  Y  M  N  *  N  S  Q  G  R  K  R  V  Q  K  N  D  P  N  C  P  C  I  F  M  K  M  S  W  *  D  K  I  L  S  *  P  T  N  *  *  F  D  K  *  N  I  C  L  T  V  H  I  H  *  K  V  L  M  Q  F  Y  M  D  K  L  H  S  L  S  T  P  M  I  M  I  S  L  E  I  N  D  D  S  I  *  S  Q  K  K  D  E  E  F  L  G  D  E  T  L  S  W  C  N  Q  G  T  S  A  S  Y  *  Q  Y  L  T  R  Y  F  F  C  S  K  F  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0002M15.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="62139" PGL_stop="62562"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="62139" e_stop="62562"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.965"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.965">
            <gDNA_exon_boundary e_start="62139" e_stop="62562" e_length="424"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62139" stop="62562"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E380017" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CACCAAGATTTACGTGGAAAACCCTTCGATGTGAAGAGTAAAAAACCACGGGACCAAAAGCTCCACTATAATCACCAAGAGTTACAATATTGTTCTACAAAATTGACCACAAAACAAAGTGCCAAACAACGAGCAACAATAAAATAAGATTGCACCAAATCTAGAGAATTAAAGGAGCAAAATCACCAATTTCGCAGCTACTGTTCACGATAGCAAAACTGAAGCTGCAGACCACCAAATCCAACTCTGTCAGTTCCTAATCAAAGATTGAGATGAAGATAATATGCTGTCCAAAAATCAGCTCAATCGGACAAGAAACGAAGCGGGAATCGCAATTTGAAGTTGGTTGTTATGGCTGGATTTTTTACTGCGAATTTCTCTCTTTTTCTCTCTTTTGGCTGCTGAAAAACTCTCTCTAAAAAAA</gDNA_template>
            <first_frame> H  Q  D  L  R  G  K  P  F  D  V  K  S  K  K  P  R  D  Q  K  L  H  Y  N  H  Q  E  L  Q  Y  C  S  T  K  L  T  T  K  Q  S  A  K  Q  R  A  T  I  K  *  D  C  T  K  S  R  E  L  K  E  Q  N  H  Q  F  R  S  Y  C  S  R  *  Q  N  *  S  C  R  P  P  N  P  T  L  S  V  P  N  Q  R  L  R  *  R  *  Y  A  V  Q  K  S  A  Q  S  D  K  K  R  S  G  N  R  N  L  K  L  V  V  M  A  G  F  F  T  A  N  F  S  L  F  L  S  F  G  C  *  K  T  L  S  K  K  </first_frame>
            <second_frame>  T  K  I  Y  V  E  N  P  S  M  *  R  V  K  N  H  G  T  K  S  S  T  I  I  T  K  S  Y  N  I  V  L  Q  N  *  P  Q  N  K  V  P  N  N  E  Q  Q  *  N  K  I  A  P  N  L  E  N  *  R  S  K  I  T  N  F  A  A  T  V  H  D  S  K  T  E  A  A  D  H  Q  I  Q  L  C  Q  F  L  I  K  D  *  D  E  D  N  M  L  S  K  N  Q  L  N  R  T  R  N  E  A  G  I  A  I  *  S  W  L  L  W  L  D  F  L  L  R  I  S  L  F  F  S  L  L  A  A  E  K  L  S  L  K  K </second_frame>
            <third_frame>   P  R  F  T  W  K  T  L  R  C  E  E  *  K  T  T  G  P  K  A  P  L  *  S  P  R  V  T  I  L  F  Y  K  I  D  H  K  T  K  C  Q  T  T  S  N  N  K  I  R  L  H  Q  I  *  R  I  K  G  A  K  S  P  I  S  Q  L  L  F  T  I  A  K  L  K  L  Q  T  T  K  S  N  S  V  S  S  *  S  K  I  E  M  K  I  I  C  C  P  K  I  S  S  I  G  Q  E  T  K  R  E  S  Q  F  E  V  G  C  Y  G  W  I  F  Y  C  E  F  L  S  F  S  L  F  W  L  L  K  N  S  L  *  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0002M15.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="68218" PGL_stop="69861"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="68218" e_stop="68368"/>
            <exon e_start="68464" e_stop="68536"/>
            <exon e_start="68621" e_stop="69105"/>
            <exon e_start="69179" e_stop="69365"/>
            <exon e_start="69448" e_stop="69491"/>
            <exon e_start="69575" e_stop="69861"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.908" acc_prob="0.949" e_score="1.000"/>
          <exon-intron don_prob="0.483" acc_prob="0.932" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.965" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.604" e_score="1.000"/>
          <exon-intron don_prob="0.977" acc_prob="0.726" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="68218" e_stop="68368" e_length="151"/>
          </exon>
          <intron i_serial="1" don_prob="0.908" acc_prob="0.949">
            <gDNA_intron_boundary i_start="68369" i_stop="68463" i_length="95"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="68464" e_stop="68536" e_length="73"/>
          </exon>
          <intron i_serial="2" don_prob="0.483" acc_prob="0.932">
            <gDNA_intron_boundary i_start="68537" i_stop="68620" i_length="84"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="68621" e_stop="69105" e_length="485"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.965">
            <gDNA_intron_boundary i_start="69106" i_stop="69178" i_length="73"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="69179" e_stop="69365" e_length="187"/>
          </exon>
          <intron i_serial="4" don_prob="0.987" acc_prob="0.604">
            <gDNA_intron_boundary i_start="69366" i_stop="69447" i_length="82"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="69448" e_stop="69491" e_length="44"/>
          </exon>
          <intron i_serial="5" don_prob="0.977" acc_prob="0.726">
            <gDNA_intron_boundary i_start="69492" i_stop="69574" i_length="83"/>
          </intron>
          <exon e_serial="6" e_score="0.997">
            <gDNA_exon_boundary e_start="69575" e_stop="69861" e_length="287"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68218" stop="68368"/>
              <exon start="68464" stop="68536"/>
              <exon start="68621" stop="69077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204772" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68218" stop="68368"/>
              <exon start="68464" stop="68536"/>
              <exon start="68621" stop="69051"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375891" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68285" stop="68368"/>
              <exon start="68464" stop="68536"/>
              <exon start="68621" stop="69002"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266142" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68954" stop="69105"/>
              <exon start="69179" stop="69365"/>
              <exon start="69448" stop="69491"/>
              <exon start="69575" stop="69861"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375890" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAATCTCTATATAAAAGAGCAAGGTGCTCGTCTTCCTTTGGCTTAAGAAATTTGTCCAAGCCCACTCTTGATACTTATAAACATCTCTTCCTCTGTAGCTAGCTAGCTAGATTTAAAGAGTTGTCAAGTTTATCCTTCCCTTAACATGAAA : ATTTTTAGTTGGATTCAAACCAAGTTCAATGGAAAACAAACTACTTGTAAGTCAAATCCAGTGGCGGTTACGC : ATCATATGTTGCATCAAGAATTCAGTGACTGGCCTAATGAACTACTTGCTATTGGTACATTTGGAAGTTTGAAAAATGATGGGAAGTTGAAACAACAAGATCAAAGCCTTACAGTTGAAGAAGTTGGACAGCTTCACAAAGAACTAAAACATCTATTTCCTGATCATGAAGAAAGTAATAAGATAGGATCAAATAAGGATCTTGACAAATTCTTTGACTGTCTTCAAAACTTGGTAGATGATGATGATCACAGAGTTATTGAAAATAAAGAAAACATTTTCAAAAGGAGTAATAGTACTCTTGTTCATGTTAGAAGCCAAGAACAATCTTCTAAATTGGACAACATGACAAATACTGGCATTAGCAAGAAATCTTTGTCATATCTCCTAAAGAAGACATTGTTCTGTAGCGCGGGATTCGCAGCCCCTTTGAGAGATAATCCACTACTTCCACACTCCAAAATTCAGAAATCAAGGATGGAAAAG : ATTCTGAGGGCTATATTACACAAAAAGATATATCCTCAAGCAAATAGTCCAAGGGGTAATGGCAGTACCACAAGAAAGAGATACATAGACAATACATGTGTGATTGAGAGTGATACTGATCAAGACGACGAAGCATTTGACACTACTGTGAAGAATGGGAGCAAATGGGATAAGTCAGATTCTGATT : TCATTGTACTAGAGATATGATTGGCTTCTTGAAACATACATGAG : ATTGATTTCTGTTTCATTTGGAATTGCAAAATTCGGATTCTTCTCAAGTTCTTTTTTCTTTTTTTTGGAAGAGTCAATCTTCCATGTATTGGTGTTATATGATCATGAGAAGTACATATTTCACTTGATTTTTGCCATGACTAGATGAGGATATCTGTTTTTGTCATGGTTGGAAAAAGTTCATCTACTGAAGTTTCAATAAGAGGGGAAGATTTGTAATCTTAATTAGCCAAGTGAATTAATGACAAATTGGAATTGTTATTTTGATGCAATAGTCTTTTCTAGTT</gDNA_template>
            <first_frame> Q  S  L  Y  K  R  A  R  C  S  S  S  F  G  L  R  N  L  S  K  P  T  L  D  T  Y  K  H  L  F  L  C  S  *  L  A  R  F  K  E  L  S  S  L  S  F  P  *  H  E   : N  F  *  L  D  S  N  Q  V  Q  W  K  T  N  Y  L  *  V  K  S  S  G  G  Y  A :   S  Y  V  A  S  R  I  Q  *  L  A  *  *  T  T  C  Y  W  Y  I  W  K  F  E  K  *  W  E  V  E  T  T  R  S  K  P  Y  S  *  R  S  W  T  A  S  Q  R  T  K  T  S  I  S  *  S  *  R  K  *  *  D  R  I  K  *  G  S  *  Q  I  L  *  L  S  S  K  L  G  R  *  *  *  S  Q  S  Y  *  K  *  R  K  H  F  Q  K  E  *  *  Y  S  C  S  C  *  K  P  R  T  I  F  *  I  G  Q  H  D  K  Y  W  H  *  Q  E  I  F  V  I  S  P  K  E  D  I  V  L  *  R  G  I  R  S  P  F  E  R  *  S  T  T  S  T  L  Q  N  S  E  I  K  D  G  K   : D  S  E  G  Y  I  T  Q  K  D  I  S  S  S  K  *  S  K  G  *  W  Q  Y  H  K  K  E  I  H  R  Q  Y  M  C  D  *  E  *  Y  *  S  R  R  R  S  I  *  H  Y  C  E  E  W  E  Q  M  G  *  V  R  F  *  F :   H  C  T  R  D  M  I  G  F  L  K  H  T  *   : D  *  F  L  F  H  L  E  L  Q  N  S  D  S  S  Q  V  L  F  S  F  F  W  K  S  Q  S  S  M  Y  W  C  Y  M  I  M  R  S  T  Y  F  T  *  F  L  P  *  L  D  E  D  I  C  F  C  H  G  W  K  K  F  I  Y  *  S  F  N  K  R  G  R  F  V  I  L  I  S  Q  V  N  *  *  Q  I  G  I  V  I  L  M  Q  *  S  F  L  V </first_frame>
            <second_frame>  N  L  Y  I  K  E  Q  G  A  R  L  P  L  A  *  E  I  C  P  S  P  L  L  I  L  I  N  I  S  S  S  V  A  S  *  L  D  L  K  S  C  Q  V  Y  P  S  L  N  M  K  :  I  F  S  W  I  Q  T  K  F  N  G  K  Q  T  T  C  K  S  N  P  V  A  V  T   : H  H  M  L  H  Q  E  F  S  D  W  P  N  E  L  L  A  I  G  T  F  G  S  L  K  N  D  G  K  L  K  Q  Q  D  Q  S  L  T  V  E  E  V  G  Q  L  H  K  E  L  K  H  L  F  P  D  H  E  E  S  N  K  I  G  S  N  K  D  L  D  K  F  F  D  C  L  Q  N  L  V  D  D  D  D  H  R  V  I  E  N  K  E  N  I  F  K  R  S  N  S  T  L  V  H  V  R  S  Q  E  Q  S  S  K  L  D  N  M  T  N  T  G  I  S  K  K  S  L  S  Y  L  L  K  K  T  L  F  C  S  A  G  F  A  A  P  L  R  D  N  P  L  L  P  H  S  K  I  Q  K  S  R  M  E  K  :  I  L  R  A  I  L  H  K  K  I  Y  P  Q  A  N  S  P  R  G  N  G  S  T  T  R  K  R  Y  I  D  N  T  C  V  I  E  S  D  T  D  Q  D  D  E  A  F  D  T  T  V  K  N  G  S  K  W  D  K  S  D  S  D   : F  I  V  L  E  I  *  L  A  S  *  N  I  H  E  :  I  D  F  C  F  I  W  N  C  K  I  R  I  L  L  K  F  F  F  L  F  F  G  R  V  N  L  P  C  I  G  V  I  *  S  *  E  V  H  I  S  L  D  F  C  H  D  *  M  R  I  S  V  F  V  M  V  G  K  S  S  S  T  E  V  S  I  R  G  E  D  L  *  S  *  L  A  K  *  I  N  D  K  L  E  L  L  F  *  C  N  S  L  F  *   </second_frame>
            <third_frame>   I  S  I  *  K  S  K  V  L  V  F  L  W  L  K  K  F  V  Q  A  H  S  *  Y  L  *  T  S  L  P  L  *  L  A  S  *  I  *  R  V  V  K  F  I  L  P  L  T  *  K :   F  L  V  G  F  K  P  S  S  M  E  N  K  L  L  V  S  Q  I  Q  W  R  L  R  :  I  I  C  C  I  K  N  S  V  T  G  L  M  N  Y  L  L  L  V  H  L  E  V  *  K  M  M  G  S  *  N  N  K  I  K  A  L  Q  L  K  K  L  D  S  F  T  K  N  *  N  I  Y  F  L  I  M  K  K  V  I  R  *  D  Q  I  R  I  L  T  N  S  L  T  V  F  K  T  W  *  M  M  M  I  T  E  L  L  K  I  K  K  T  F  S  K  G  V  I  V  L  L  F  M  L  E  A  K  N  N  L  L  N  W  T  T  *  Q  I  L  A  L  A  R  N  L  C  H  I  S  *  R  R  H  C  S  V  A  R  D  S  Q  P  L  *  E  I  I  H  Y  F  H  T  P  K  F  R  N  Q  G  W  K  R :   F  *  G  L  Y  Y  T  K  R  Y  I  L  K  Q  I  V  Q  G  V  M  A  V  P  Q  E  R  D  T  *  T  I  H  V  *  L  R  V  I  L  I  K  T  T  K  H  L  T  L  L  *  R  M  G  A  N  G  I  S  Q  I  L  I  :  S  L  Y  *  R  Y  D  W  L  L  E  T  Y  M  R :   L  I  S  V  S  F  G  I  A  K  F  G  F  F  S  S  S  F  F  F  F  L  E  E  S  I  F  H  V  L  V  L  Y  D  H  E  K  Y  I  F  H  L  I  F  A  M  T  R  *  G  Y  L  F  L  S  W  L  E  K  V  H  L  L  K  F  Q  *  E  G  K  I  C  N  L  N  *  P  S  E  L  M  T  N  W  N  C  Y  F  D  A  I  V  F  S  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002M15.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68324" stop="68368"/>
                    <exon start="68464" stop="68536"/>
                    <exon start="68621" stop="69105"/>
                    <exon start="69179" stop="69365"/>
                    <exon start="69448" stop="69467"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>807</number_coding_nucleotides>
                  <number_encoded_amino_acids>269</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LDLKSCQVYPSLNMKIFSWIQTKFNGKQTTCKSNPVAVTHHMLHQEFSDWPNELLAIGTFGSLKNDGKLKQQDQSLTVEEVGQLHKELKHLFPDHEESNKIGSNKDLDKFFDCLQNLVDDDDHRVIENKENIFKRSNSTLVHVRSQEQSSKLDNMTNTGISKKSLSYLLKKTLFCSAGFAAPLRDNPLLPHSKIQKSRMEKILRAILHKKIYPQANSPRGNGSTTRKRYIDNTCVIESDTDQDDEAFDTTVKNGSKWDKSDSDFIVLEI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="71303" PGL_stop="70762"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="71303" e_stop="70762"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.926"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.926">
            <gDNA_exon_boundary e_start="71303" e_stop="70762" e_length="542"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71303" stop="70762"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E439930" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TATATTTTGAGGGACGTATCGCGCGCCGCGATGGATACTATATTTCGAGGGACGTATCGCGCGCCGCGATGGTTACTATTATCGAGGATCGTGTCGTGCGCCGCGACAGATGCATGGACAGATATGTCCCCCATGGGTCCCGGACTGAGAGACAGCGGGTGTGTATCGTTAAGAAAGACATGCATCACGATATTTGACATTGCATCTCATGGCATTGCACATTTTATTATTGATGAACTTGAACATGTGTTTTGCTAATCTTGTGAATGTTTCTCTGTGAAGTTTGTGATTGTTGAATATTGAGTTGTTATTGAGAATGTGTAAACAGATAGAGTGTGGTTATTGAGTGGTGTGTTTGGTAAACTGTTAGGCTGTAGCGTGGAGGTTTAGATAGGGTGTAAGGAGTACCCGTATTTTGTTCACTTAACTTGTATTTAGAGGTTTGCTTGTTGGGTACCGCGTGGTTTGGTACTCACCCCTTGCTTCTACAAATTTTTGTAGGTTACGAGCCTGGATCTTTGTGATACCTTCTATTCTCTTCG</gDNA_template>
            <first_frame> Y  I  L  R  D  V  S  R  A  A  M  D  T  I  F  R  G  T  Y  R  A  P  R  W  L  L  L  S  R  I  V  S  C  A  A  T  D  A  W  T  D  M  S  P  M  G  P  G  L  R  D  S  G  C  V  S  L  R  K  T  C  I  T  I  F  D  I  A  S  H  G  I  A  H  F  I  I  D  E  L  E  H  V  F  C  *  S  C  E  C  F  S  V  K  F  V  I  V  E  Y  *  V  V  I  E  N  V  *  T  D  R  V  W  L  L  S  G  V  F  G  K  L  L  G  C  S  V  E  V  *  I  G  C  K  E  Y  P  Y  F  V  H  L  T  C  I  *  R  F  A  C  W  V  P  R  G  L  V  L  T  P  C  F  Y  K  F  L  *  V  T  S  L  D  L  C  D  T  F  Y  S  L   </first_frame>
            <second_frame>  I  F  *  G  T  Y  R  A  P  R  W  I  L  Y  F  E  G  R  I  A  R  R  D  G  Y  Y  Y  R  G  S  C  R  A  P  R  Q  M  H  G  Q  I  C  P  P  W  V  P  D  *  E  T  A  G  V  Y  R  *  E  R  H  A  S  R  Y  L  T  L  H  L  M  A  L  H  I  L  L  L  M  N  L  N  M  C  F  A  N  L  V  N  V  S  L  *  S  L  *  L  L  N  I  E  L  L  L  R  M  C  K  Q  I  E  C  G  Y  *  V  V  C  L  V  N  C  *  A  V  A  W  R  F  R  *  G  V  R  S  T  R  I  L  F  T  *  L  V  F  R  G  L  L  V  G  Y  R  V  V  W  Y  S  P  L  A  S  T  N  F  C  R  L  R  A  W  I  F  V  I  P  S  I  L  F  </second_frame>
            <third_frame>   Y  F  E  G  R  I  A  R  R  D  G  Y  Y  I  S  R  D  V  S  R  A  A  M  V  T  I  I  E  D  R  V  V  R  R  D  R  C  M  D  R  Y  V  P  H  G  S  R  T  E  R  Q  R  V  C  I  V  K  K  D  M  H  H  D  I  *  H  C  I  S  W  H  C  T  F  Y  Y  *  *  T  *  T  C  V  L  L  I  L  *  M  F  L  C  E  V  C  D  C  *  I  L  S  C  Y  *  E  C  V  N  R  *  S  V  V  I  E  W  C  V  W  *  T  V  R  L  *  R  G  G  L  D  R  V  *  G  V  P  V  F  C  S  L  N  L  Y  L  E  V  C  L  L  G  T  A  W  F  G  T  H  P  L  L  L  Q  I  F  V  G  Y  E  P  G  S  L  *  Y  L  L  F  S  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002M15.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71303" stop="71046"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YILRDVSRAAMDTIFRGTYRAPRWLLLSRIVSCAATDAWTDMSPMGPGLRDSGCVSLRKTCITIFDIASHGIAHFIIDELEHVFC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002M15.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71301" stop="71107"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YFEGRIARRDGYYISRDVSRAAMVTIIEDRVVRRDRCMDRYVPHGSRTERQRVCIVKKDMHHDI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="81900" PGL_stop="81240"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="81900" e_stop="81240"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.924"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.924">
            <gDNA_exon_boundary e_start="81900" e_stop="81240" e_length="661"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81900" stop="81240"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352117" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTGATCCTGGATCCACATTTTCATATGTATCTTCCTCATTTGCTACTGGTCTTAATTTACATTGTGAATTGCTTGACATGCCTATTCGTGTTTCTACTCCGGTGGGTGAGTCTGTGATAGTCGAAAAGGTGTATAGGTCTTGTCTTGTGACTTTTATGGAGAGTAATACTCATGTAGACTTGGTTATCTTAGAAATGGTTGATTTTGATGTAATTCTGGGTATGACTTGGCTTTCTCCAAATTTCGCAATCTTAGATTGTAATGCTAAAACTATAACGTTGGCCAAGCCTGGGACAGATCCGTTAGTGTGGGAGGGTGACTACACTTCCAGTCCAGTTTGTATCATCTCCTTTCTTCGTGCTAAGAGAATGGTTAGTAAAGGGTGCTCAGCTTTCTTGGCACATCTCCGGGATGATACTACCCAGGTACCTTCAATTGAGTCGGTTCCGGTAGTCCGTGAGTTTCTGGATGTGTTTCCTGCAGACCTTCCTGGTATGCCACCGGATAGAGATATTGACTTTTGCATTGATCTGGAGCCGGGTACTGGCCCCATTTCCATACCTCCTTATAGAATGGCTCCAGCAGAGTTAAGGGAGTTAAAGGCCCAACTTCAAGAGTTGTTAAGTAAAGGTTTCATTAGACCAAGTGCATCCCCTTGGG</gDNA_template>
            <first_frame> F  D  P  G  S  T  F  S  Y  V  S  S  S  F  A  T  G  L  N  L  H  C  E  L  L  D  M  P  I  R  V  S  T  P  V  G  E  S  V  I  V  E  K  V  Y  R  S  C  L  V  T  F  M  E  S  N  T  H  V  D  L  V  I  L  E  M  V  D  F  D  V  I  L  G  M  T  W  L  S  P  N  F  A  I  L  D  C  N  A  K  T  I  T  L  A  K  P  G  T  D  P  L  V  W  E  G  D  Y  T  S  S  P  V  C  I  I  S  F  L  R  A  K  R  M  V  S  K  G  C  S  A  F  L  A  H  L  R  D  D  T  T  Q  V  P  S  I  E  S  V  P  V  V  R  E  F  L  D  V  F  P  A  D  L  P  G  M  P  P  D  R  D  I  D  F  C  I  D  L  E  P  G  T  G  P  I  S  I  P  P  Y  R  M  A  P  A  E  L  R  E  L  K  A  Q  L  Q  E  L  L  S  K  G  F  I  R  P  S  A  S  P  W  </first_frame>
            <second_frame>  L  I  L  D  P  H  F  H  M  Y  L  P  H  L  L  L  V  L  I  Y  I  V  N  C  L  T  C  L  F  V  F  L  L  R  W  V  S  L  *  *  S  K  R  C  I  G  L  V  L  *  L  L  W  R  V  I  L  M  *  T  W  L  S  *  K  W  L  I  L  M  *  F  W  V  *  L  G  F  L  Q  I  S  Q  S  *  I  V  M  L  K  L  *  R  W  P  S  L  G  Q  I  R  *  C  G  R  V  T  T  L  P  V  Q  F  V  S  S  P  F  F  V  L  R  E  W  L  V  K  G  A  Q  L  S  W  H  I  S  G  M  I  L  P  R  Y  L  Q  L  S  R  F  R  *  S  V  S  F  W  M  C  F  L  Q  T  F  L  V  C  H  R  I  E  I  L  T  F  A  L  I  W  S  R  V  L  A  P  F  P  Y  L  L  I  E  W  L  Q  Q  S  *  G  S  *  R  P  N  F  K  S  C  *  V  K  V  S  L  D  Q  V  H  P  L  G </second_frame>
            <third_frame>   *  S  W  I  H  I  F  I  C  I  F  L  I  C  Y  W  S  *  F  T  L  *  I  A  *  H  A  Y  S  C  F  Y  S  G  G  *  V  C  D  S  R  K  G  V  *  V  L  S  C  D  F  Y  G  E  *  Y  S  C  R  L  G  Y  L  R  N  G  *  F  *  C  N  S  G  Y  D  L  A  F  S  K  F  R  N  L  R  L  *  C  *  N  Y  N  V  G  Q  A  W  D  R  S  V  S  V  G  G  *  L  H  F  Q  S  S  L  Y  H  L  L  S  S  C  *  E  N  G  *  *  R  V  L  S  F  L  G  T  S  P  G  *  Y  Y  P  G  T  F  N  *  V  G  S  G  S  P  *  V  S  G  C  V  S  C  R  P  S  W  Y  A  T  G  *  R  Y  *  L  L  H  *  S  G  A  G  Y  W  P  H  F  H  T  S  L  *  N  G  S  S  R  V  K  G  V  K  G  P  T  S  R  V  V  K  *  R  F  H  *  T  K  C  I  P  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002M15.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="81900" stop="81241"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>660</number_coding_nucleotides>
                  <number_encoded_amino_acids>220</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FDPGSTFSYVSSSFATGLNLHCELLDMPIRVSTPVGESVIVEKVYRSCLVTFMESNTHVDLVILEMVDFDVILGMTWLSPNFAILDCNAKTITLAKPGTDPLVWEGDYTSSPVCIISFLRAKRMVSKGCSAFLAHLRDDTTQVPSIESVPVVREFLDVFPADLPGMPPDRDIDFCIDLEPGTGPISIPPYRMAPAELRELKAQLQELLSKGFIRPSASPW</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="81600" PGL_stop="81930"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="81600" e_stop="81930"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.937"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.937">
            <gDNA_exon_boundary e_start="81600" e_stop="81930" e_length="331"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81600" stop="81930"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352716" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GATCTGTCCCAGGCTTGGCCAACGTTATAGTTTTAGCATTACAATCTAAGATTGCGAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAGTCTACATGAGTATTACTCTCCATAAAAGTCACAAGACAAGACCTATACACCTTTTCGACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAATTCACAATGTAAATTAAGACCAGTAGCAAATGAGGAAGATACATATGAAAATGTGGATCCAGGATCAAATAATACAAAAGCCATGCAATCACCAACCAA</gDNA_template>
            <first_frame> D  L  S  Q  A  W  P  T  L  *  F  *  H  Y  N  L  R  L  R  N  L  E  K  A  K  S  Y  P  E  L  H  Q  N  Q  P  F  L  R  *  P  S  L  H  E  Y  Y  S  P  *  K  S  Q  D  K  T  Y  T  P  F  R  L  S  Q  T  H  P  P  E  *  K  H  E  *  A  C  Q  A  I  H  N  V  N  *  D  Q  *  Q  M  R  K  I  H  M  K  M  W  I  Q  D  Q  I  I  Q  K  P  C  N  H  Q  P  </first_frame>
            <second_frame>  I  C  P  R  L  G  Q  R  Y  S  F  S  I  T  I  *  D  C  E  I  W  R  K  P  S  H  T  Q  N  Y  I  K  I  N  H  F  *  D  N  Q  V  Y  M  S  I  T  L  H  K  S  H  K  T  R  P  I  H  L  F  D  Y  H  R  L  T  H  R  S  R  N  T  N  R  H  V  K  Q  F  T  M  *  I  K  T  S  S  K  *  G  R  Y  I  *  K  C  G  S  R  I  K  *  Y  K  S  H  A  I  T  N  Q </second_frame>
            <third_frame>   S  V  P  G  L  A  N  V  I  V  L  A  L  Q  S  K  I  A  K  F  G  E  S  Q  V  I  P  R  I  T  S  K  S  T  I  S  K  I  T  K  S  T  *  V  L  L  S  I  K  V  T  R  Q  D  L  Y  T  F  S  T  I  T  D  S  P  T  G  V  E  T  R  I  G  M  S  S  N  S  Q  C  K  L  R  P  V  A  N  E  E  D  T  Y  E  N  V  D  P  G  S  N  N  T  K  A  M  Q  S  P  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002M15.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="81731" stop="81928"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VLLSIKVTRQDLYTFSTITDSPTGVETRIGMSSNSQCKLRPVANEEDTYENVDPGSNNTKAMQSPT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="85946" PGL_stop="86598"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="85946" e_stop="86598"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.951"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.951">
            <gDNA_exon_boundary e_start="85946" e_stop="86598" e_length="653"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85946" stop="86598"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317478" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGATGCAAATGAAATCTGTAGTAAGAGCATACAGTCTTGCTATTAAAAAAGAATTTCTTTGTGATCAATCCAAAAGTAAAAGTTGGAAAGTTATTTGCAAGCGTCATGAGTTAGGGTGTGATTGGATGATTAGGTTTAGAGAGATTTCAAGCGGTATGTGGAAGACAGGAAAAATGATTGAACCGCATACTTGTCTTACAGATAACTATAAGGAGGATTATTTCAATTTGAATGATCACATGATTGACACTTCATTAATACCATATGTTATATAAAATCCGGACATAAATATTAAGATGATCCGTGAAATTATCAAAGGAAAACATCACTATACTCCTAGTTATAGAAAAGAACAAAAAGGTCGAAGAAAAGCATTTCGAATGGTTTATGGTGATTTTAAAAGTTCATTTAAGGCATTACCTCGATACATGGCTGCACTACAATTATTCAATCCAGGCACTATTATTGAGTGGGAGCATCATTCTACAACAATGCAAGGTGAGCAAATTTTTAAATTTCTTTTTTGGGCTTTTAAACAGAGCATTGATGGTTTCAAAAGTTGTAGGCCGGTCATTTCTATCGACGGCACACATCTTTATGGTTTGTATGATATCAAATTGTTAATTGCGGTTGGAATTGTTGCGAATGAAAAT</gDNA_template>
            <first_frame> R  C  K  *  N  L  *  *  E  H  T  V  L  L  L  K  K  N  F  F  V  I  N  P  K  V  K  V  G  K  L  F  A  S  V  M  S  *  G  V  I  G  *  L  G  L  E  R  F  Q  A  V  C  G  R  Q  E  K  *  L  N  R  I  L  V  L  Q  I  T  I  R  R  I  I  S  I  *  M  I  T  *  L  T  L  H  *  Y  H  M  L  Y  K  I  R  T  *  I  L  R  *  S  V  K  L  S  K  E  N  I  T  I  L  L  V  I  E  K  N  K  K  V  E  E  K  H  F  E  W  F  M  V  I  L  K  V  H  L  R  H  Y  L  D  T  W  L  H  Y  N  Y  S  I  Q  A  L  L  L  S  G  S  I  I  L  Q  Q  C  K  V  S  K  F  L  N  F  F  F  G  L  L  N  R  A  L  M  V  S  K  V  V  G  R  S  F  L  S  T  A  H  I  F  M  V  C  M  I  S  N  C  *  L  R  L  E  L  L  R  M  K   </first_frame>
            <second_frame>  D  A  N  E  I  C  S  K  S  I  Q  S  C  Y  *  K  R  I  S  L  *  S  I  Q  K  *  K  L  E  S  Y  L  Q  A  S  *  V  R  V  *  L  D  D  *  V  *  R  D  F  K  R  Y  V  E  D  R  K  N  D  *  T  A  Y  L  S  Y  R  *  L  *  G  G  L  F  Q  F  E  *  S  H  D  *  H  F  I  N  T  I  C  Y  I  K  S  G  H  K  Y  *  D  D  P  *  N  Y  Q  R  K  T  S  L  Y  S  *  L  *  K  R  T  K  R  S  K  K  S  I  S  N  G  L  W  *  F  *  K  F  I  *  G  I  T  S  I  H  G  C  T  T  I  I  Q  S  R  H  Y  Y  *  V  G  A  S  F  Y  N  N  A  R  *  A  N  F  *  I  S  F  L  G  F  *  T  E  H  *  W  F  Q  K  L  *  A  G  H  F  Y  R  R  H  T  S  L  W  F  V  *  Y  Q  I  V  N  C  G  W  N  C  C  E  *  K  </second_frame>
            <third_frame>   M  Q  M  K  S  V  V  R  A  Y  S  L  A  I  K  K  E  F  L  C  D  Q  S  K  S  K  S  W  K  V  I  C  K  R  H  E  L  G  C  D  W  M  I  R  F  R  E  I  S  S  G  M  W  K  T  G  K  M  I  E  P  H  T  C  L  T  D  N  Y  K  E  D  Y  F  N  L  N  D  H  M  I  D  T  S  L  I  P  Y  V  I  *  N  P  D  I  N  I  K  M  I  R  E  I  I  K  G  K  H  H  Y  T  P  S  Y  R  K  E  Q  K  G  R  R  K  A  F  R  M  V  Y  G  D  F  K  S  S  F  K  A  L  P  R  Y  M  A  A  L  Q  L  F  N  P  G  T  I  I  E  W  E  H  H  S  T  T  M  Q  G  E  Q  I  F  K  F  L  F  W  A  F  K  Q  S  I  D  G  F  K  S  C  R  P  V  I  S  I  D  G  T  H  L  Y  G  L  Y  D  I  K  L  L  I  A  V  G  I  V  A  N  E  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002M15.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="86221" stop="86598"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>378</number_coding_nucleotides>
                  <number_encoded_amino_acids>126</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NPDINIKMIREIIKGKHHYTPSYRKEQKGRRKAFRMVYGDFKSSFKALPRYMAALQLFNPGTIIEWEHHSTTMQGEQIFKFLFWAFKQSIDGFKSCRPVISIDGTHLYGLYDIKLLIAVGIVANEN</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002M15.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="86246" stop="86569"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>321</number_coding_nucleotides>
                  <number_encoded_amino_acids>107</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SVKLSKENITILLVIEKNKKVEEKHFEWFMVILKVHLRHYLDTWLHYNYSIQALLLSGSIILQQCKVSKFLNFFFGLLNRALMVSKVVGRSFLSTAHIFMVCMISNC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002M15.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85948" stop="86220"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>270</number_coding_nucleotides>
                  <number_encoded_amino_acids>90</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MQMKSVVRAYSLAIKKEFLCDQSKSKSWKVICKRHELGCDWMIRFREISSGMWKTGKMIEPHTCLTDNYKEDYFNLNDHMIDTSLIPYVI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="91097" PGL_stop="88362"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="91097" e_stop="91043"/>
            <exon e_start="90913" e_stop="90121"/>
            <exon e_start="90023" e_stop="89786"/>
            <exon e_start="89713" e_stop="89231"/>
            <exon e_start="89148" e_stop="88621"/>
            <exon e_start="88519" e_stop="88362"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.939" acc_prob="0.991" e_score="0.982"/>
          <exon-intron don_prob="0.979" acc_prob="0.991" e_score="0.965"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.941"/>
          <exon-intron don_prob="0.905" acc_prob="1.000" e_score="0.970"/>
          <exon-intron don_prob="0.966" acc_prob="0.130" e_score="0.961"/>
          <exon-only e_score="0.968"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.982">
            <gDNA_exon_boundary e_start="91097" e_stop="91043" e_length="55"/>
          </exon>
          <intron i_serial="1" don_prob="0.939" acc_prob="0.991">
            <gDNA_intron_boundary i_start="91042" i_stop="90914" i_length="129"/>
          </intron>
          <exon e_serial="2" e_score="0.965">
            <gDNA_exon_boundary e_start="90913" e_stop="90121" e_length="793"/>
          </exon>
          <intron i_serial="2" don_prob="0.979" acc_prob="0.991">
            <gDNA_intron_boundary i_start="90120" i_stop="90024" i_length="97"/>
          </intron>
          <exon e_serial="3" e_score="0.941">
            <gDNA_exon_boundary e_start="90023" e_stop="89786" e_length="238"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="89785" i_stop="89714" i_length="72"/>
          </intron>
          <exon e_serial="4" e_score="0.970">
            <gDNA_exon_boundary e_start="89713" e_stop="89231" e_length="483"/>
          </exon>
          <intron i_serial="4" don_prob="0.905" acc_prob="1.000">
            <gDNA_intron_boundary i_start="89230" i_stop="89149" i_length="82"/>
          </intron>
          <exon e_serial="5" e_score="0.961">
            <gDNA_exon_boundary e_start="89148" e_stop="88621" e_length="528"/>
          </exon>
          <intron i_serial="5" don_prob="0.966" acc_prob="0.130">
            <gDNA_intron_boundary i_start="88620" i_stop="88520" i_length="101"/>
          </intron>
          <exon e_serial="6" e_score="0.968">
            <gDNA_exon_boundary e_start="88519" e_stop="88362" e_length="158"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91097" stop="91043"/>
              <exon start="90913" stop="90318"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273357" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90374" stop="90121"/>
              <exon start="90023" stop="89988"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276550" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90174" stop="90121"/>
              <exon start="90023" stop="89786"/>
              <exon start="89713" stop="89433"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276969" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90006" stop="89786"/>
              <exon start="89713" stop="89614"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393845" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90005" stop="89786"/>
              <exon start="89713" stop="89301"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89923" stop="89786"/>
              <exon start="89713" stop="89276"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E275375" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89531" stop="89231"/>
              <exon start="89148" stop="89005"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273853" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89130" stop="88621"/>
              <exon start="88519" stop="88362"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538686" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89129" stop="88621"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E275102" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATTCTTGTTATTCTTCAAATTTTCTAAAGTTTTTAAAAGCATTTTCTTTATAAG : ATATGCATCTGTCAAATTTATACCTACATCCTGATCCAGTAGAGCATGATGTATTAAAAATTCAAGTTCATCATCGTTCTGAAGGAATTTGGAATGGTAGCATAAAAGAAAAGAGGACTTGCTTATATACGCGTCGTGGTGATATTGAATTTTGGCAACATTTAAAATATCATCCATTACATTCTCGCATCCTTCAATATTTTGAAAATTGTAGATTTAAAGTAATTCTTGATGTTGGATGTGTGTCGTATGACTCCGGATTAATTTCTGCTTTAATTGAAAGTGGCGTCCGGAAACTCATACTTCTCACATGCGAACTGGCGAGGCTACCATAACTTTACAAGATATTGAAATTTTATTCGGAATGGTAGTAGATGGTAGTCCTATAATTTTAAATGGAGCTGATTCTTTAGGGATTATAGGTAGACAAGAAATGATTTTTCAATTAACAGGATGGTTACCCGATACTAGTTGTTTTTCTGGTGTTATTAGATTGTTAACATATAAATTGATTGAGTATATCGAAGGTTTGGAAGTTATTAATGATAACTCAACTGAGCATGAAGTTCAACAAAGATTTAGATTATATTTATTATGGTTATGTGGTGGATCAATATTTCCGGATAAATCTAATAATAAGATTAATTTGGACATTTTGATTGACATGAGAAATTTAGATTTAATGTCAACTCAAGCATGGGAATCGGACACATTATCATATTTGTATAATTGTTTATGCCGTGCGTCAATGAAAAAATCAAATGAAGTTTGTGGATTTCTCTCTTTAGTGCAG : ATTTGGGCATGGGAAAGAATTATTCCCCTGCAACCATTGCCAAAGCCTCTAAGAACCAATCAACTTGAGGCTTCACCTGCGCTTGCACGTAAATGGACGCGAGGTAGAAATCATCGAAATGAGGCATGAACTGTAATCGTGTGATTAGGGATGTACTAGATAATCTAACTGATGAACAAGTATTTAATATTATTAGTATCTTAAACTATTCATAGTTTATTTTATTTTAAATAAGAAT : ATATTTTTTTCTGCCAATGTTGTTTTTATAATTATCTTACTTAATTATTTTTTAATAGTTTATTTGGCAGCCTTATTCGGAAGATGTTATTAATGGATTGCCTGAGTGGTGTCGGTCAGGACAACGTGTCTGCATGGCACAGGTGCCACTGATTTATGAAATTTATCGTGAGTGGCACATGATTGATCGTGTTGTGAGACAGTTCGGTTATTTACAACATATTCCTGAACCGTGTACCCAATTTTCTGAATATCATTTTAAGTGTGATAAACGATCCAAAATAAAACAAGAAGATATAGATGCATTTAACTATACACAATATTTATGGGAACAACGTCACAATCGTATATTTCGACCTCCATTTGTAAGTGATCAAACAGATTACTTTCGTTGGTACATGAGGCATACCCGCATGGTCATTGGAAATCCACAACATGTTGTACAAAAGAGTATCAACACATGGCAGGAAGACATGAGGCATTA : GTTAGGGGTCATGAAATGCAGTATCGTCAAGCTCGGATGATTGAAAATGATGAAAATCAATCTAATGAAATGAGACAATATGCAGAGGAAGTCGCTCGTATTTCAATGGAGTCAATGAATGCGGCCTTTCAGGGAACGCGATTGAGCTTTGATCCTGATTGCAATCCTCCCACTCAATACGATGAACCACCACCAGTACAAGTATCTCGCCGATCACGACAAACAACACCGAGAGAGGGTGCTCGTCGAGGTAGAAGGACCGCTGGTGAAACAACTGATTTTTCTGCAGGGCCCTCTAACGCTAATGTGGCGACTCCCGAGCCTTATTATCCCACGTTTGATTTTTATGCAGGGCCCTCTAACACTAATTCGAATTTTTCTAGTCAGCAAACAGTTGGTTTTGTAACTCCGCAGGTTCCAATATCTGGGTTTGCGTAATTTAGTGGATCTCAATATGGTTTTCAACATGGTATGCGTGAATTTCCTATACATAATTCTCCATTTGGTGGAAGATTGAATTTTTCGAAT : TAACTGTATTTGATGATTCAAGATTTAATGCTGGGGCTTCACAAAATTTAGTTCTTAATAAACAAAATTCACCTCGGAGAACATCTAGGCTACACAAATCAACTAGATGTGGAACAGGCAGTCACTATCAAAATGAGGAAGATTTTGAAAATGAAGAT</gDNA_template>
            <first_frame> N  S  C  Y  S  S  N  F  L  K  F  L  K  A  F  S  L  *   : D  M  H  L  S  N  L  Y  L  H  P  D  P  V  E  H  D  V  L  K  I  Q  V  H  H  R  S  E  G  I  W  N  G  S  I  K  E  K  R  T  C  L  Y  T  R  R  G  D  I  E  F  W  Q  H  L  K  Y  H  P  L  H  S  R  I  L  Q  Y  F  E  N  C  R  F  K  V  I  L  D  V  G  C  V  S  Y  D  S  G  L  I  S  A  L  I  E  S  G  V  R  K  L  I  L  L  T  C  E  L  A  R  L  P  *  L  Y  K  I  L  K  F  Y  S  E  W  *  *  M  V  V  L  *  F  *  M  E  L  I  L  *  G  L  *  V  D  K  K  *  F  F  N  *  Q  D  G  Y  P  I  L  V  V  F  L  V  L  L  D  C  *  H  I  N  *  L  S  I  S  K  V  W  K  L  L  M  I  T  Q  L  S  M  K  F  N  K  D  L  D  Y  I  Y  Y  G  Y  V  V  D  Q  Y  F  R  I  N  L  I  I  R  L  I  W  T  F  *  L  T  *  E  I  *  I  *  C  Q  L  K  H  G  N  R  T  H  Y  H  I  C  I  I  V  Y  A  V  R  Q  *  K  N  Q  M  K  F  V  D  F  S  L  *  C  R :   F  G  H  G  K  E  L  F  P  C  N  H  C  Q  S  L  *  E  P  I  N  L  R  L  H  L  R  L  H  V  N  G  R  E  V  E  I  I  E  M  R  H  E  L  *  S  C  D  *  G  C  T  R  *  S  N  *  *  T  S  I  *  Y  Y  *  Y  L  K  L  F  I  V  Y  F  I  L  N  K  N  :  I  F  F  S  A  N  V  V  F  I  I  I  L  L  N  Y  F  L  I  V  Y  L  A  A  L  F  G  R  C  Y  *  W  I  A  *  V  V  S  V  R  T  T  C  L  H  G  T  G  A  T  D  L  *  N  L  S  *  V  A  H  D  *  S  C  C  E  T  V  R  L  F  T  T  Y  S  *  T  V  Y  P  I  F  *  I  S  F  *  V  *  *  T  I  Q  N  K  T  R  R  Y  R  C  I  *  L  Y  T  I  F  M  G  T  T  S  Q  S  Y  I  S  T  S  I  C  K  *  S  N  R  L  L  S  L  V  H  E  A  Y  P  H  G  H  W  K  S  T  T  C  C  T  K  E  Y  Q  H  M  A  G  R  H  E  A  L  :  V  R  G  H  E  M  Q  Y  R  Q  A  R  M  I  E  N  D  E  N  Q  S  N  E  M  R  Q  Y  A  E  E  V  A  R  I  S  M  E  S  M  N  A  A  F  Q  G  T  R  L  S  F  D  P  D  C  N  P  P  T  Q  Y  D  E  P  P  P  V  Q  V  S  R  R  S  R  Q  T  T  P  R  E  G  A  R  R  G  R  R  T  A  G  E  T  T  D  F  S  A  G  P  S  N  A  N  V  A  T  P  E  P  Y  Y  P  T  F  D  F  Y  A  G  P  S  N  T  N  S  N  F  S  S  Q  Q  T  V  G  F  V  T  P  Q  V  P  I  S  G  F  A  *  F  S  G  S  Q  Y  G  F  Q  H  G  M  R  E  F  P  I  H  N  S  P  F  G  G  R  L  N  F  S  N  :  *  L  Y  L  M  I  Q  D  L  M  L  G  L  H  K  I  *  F  L  I  N  K  I  H  L  G  E  H  L  G  Y  T  N  Q  L  D  V  E  Q  A  V  T  I  K  M  R  K  I  L  K  M  K   </first_frame>
            <second_frame>  I  L  V  I  L  Q  I  F  *  S  F  *  K  H  F  L  Y  K  :  I  C  I  C  Q  I  Y  T  Y  I  L  I  Q  *  S  M  M  Y  *  K  F  K  F  I  I  V  L  K  E  F  G  M  V  A  *  K  K  R  G  L  A  Y  I  R  V  V  V  I  L  N  F  G  N  I  *  N  I  I  H  Y  I  L  A  S  F  N  I  L  K  I  V  D  L  K  *  F  L  M  L  D  V  C  R  M  T  P  D  *  F  L  L  *  L  K  V  A  S  G  N  S  Y  F  S  H  A  N  W  R  G  Y  H  N  F  T  R  Y  *  N  F  I  R  N  G  S  R  W  *  S  Y  N  F  K  W  S  *  F  F  R  D  Y  R  *  T  R  N  D  F  S  I  N  R  M  V  T  R  Y  *  L  F  F  W  C  Y  *  I  V  N  I  *  I  D  *  V  Y  R  R  F  G  S  Y  *  *  *  L  N  *  A  *  S  S  T  K  I  *  I  I  F  I  M  V  M  W  W  I  N  I  S  G  *  I  *  *  *  D  *  F  G  H  F  D  *  H  E  K  F  R  F  N  V  N  S  S  M  G  I  G  H  I  I  I  F  V  *  L  F  M  P  C  V  N  E  K  I  K  *  S  L  W  I  S  L  F  S  A   : D  L  G  M  G  K  N  Y  S  P  A  T  I  A  K  A  S  K  N  Q  S  T  *  G  F  T  C  A  C  T  *  M  D  A  R  *  K  S  S  K  *  G  M  N  C  N  R  V  I  R  D  V  L  D  N  L  T  D  E  Q  V  F  N  I  I  S  I  L  N  Y  S  *  F  I  L  F  *  I  R  I :   Y  F  F  L  P  M  L  F  L  *  L  S  Y  L  I  I  F  *  *  F  I  W  Q  P  Y  S  E  D  V  I  N  G  L  P  E  W  C  R  S  G  Q  R  V  C  M  A  Q  V  P  L  I  Y  E  I  Y  R  E  W  H  M  I  D  R  V  V  R  Q  F  G  Y  L  Q  H  I  P  E  P  C  T  Q  F  S  E  Y  H  F  K  C  D  K  R  S  K  I  K  Q  E  D  I  D  A  F  N  Y  T  Q  Y  L  W  E  Q  R  H  N  R  I  F  R  P  P  F  V  S  D  Q  T  D  Y  F  R  W  Y  M  R  H  T  R  M  V  I  G  N  P  Q  H  V  V  Q  K  S  I  N  T  W  Q  E  D  M  R  H  * :   L  G  V  M  K  C  S  I  V  K  L  G  *  L  K  M  M  K  I  N  L  M  K  *  D  N  M  Q  R  K  S  L  V  F  Q  W  S  Q  *  M  R  P  F  R  E  R  D  *  A  L  I  L  I  A  I  L  P  L  N  T  M  N  H  H  Q  Y  K  Y  L  A  D  H  D  K  Q  H  R  E  R  V  L  V  E  V  E  G  P  L  V  K  Q  L  I  F  L  Q  G  P  L  T  L  M  W  R  L  P  S  L  I  I  P  R  L  I  F  M  Q  G  P  L  T  L  I  R  I  F  L  V  S  K  Q  L  V  L  *  L  R  R  F  Q  Y  L  G  L  R  N  L  V  D  L  N  M  V  F  N  M  V  C  V  N  F  L  Y  I  I  L  H  L  V  E  D  *  I  F  R  I :   N  C  I  *  *  F  K  I  *  C  W  G  F  T  K  F  S  S  *  *  T  K  F  T  S  E  N  I  *  A  T  Q  I  N  *  M  W  N  R  Q  S  L  S  K  *  G  R  F  *  K  *  R  </second_frame>
            <third_frame>   F  L  L  F  F  K  F  S  K  V  F  K  S  I  F  F  I  R :   Y  A  S  V  K  F  I  P  T  S  *  S  S  R  A  *  C  I  K  N  S  S  S  S  S  F  *  R  N  L  E  W  *  H  K  R  K  E  D  L  L  I  Y  A  S  W  *  Y  *  I  L  A  T  F  K  I  S  S  I  T  F  S  H  P  S  I  F  *  K  L  *  I  *  S  N  S  *  C  W  M  C  V  V  *  L  R  I  N  F  C  F  N  *  K  W  R  P  E  T  H  T  S  H  M  R  T  G  E  A  T  I  T  L  Q  D  I  E  I  L  F  G  M  V  V  D  G  S  P  I  I  L  N  G  A  D  S  L  G  I  I  G  R  Q  E  M  I  F  Q  L  T  G  W  L  P  D  T  S  C  F  S  G  V  I  R  L  L  T  Y  K  L  I  E  Y  I  E  G  L  E  V  I  N  D  N  S  T  E  H  E  V  Q  Q  R  F  R  L  Y  L  L  W  L  C  G  G  S  I  F  P  D  K  S  N  N  K  I  N  L  D  I  L  I  D  M  R  N  L  D  L  M  S  T  Q  A  W  E  S  D  T  L  S  Y  L  Y  N  C  L  C  R  A  S  M  K  K  S  N  E  V  C  G  F  L  S  L  V  Q  :  I  W  A  W  E  R  I  I  P  L  Q  P  L  P  K  P  L  R  T  N  Q  L  E  A  S  P  A  L  A  R  K  W  T  R  G  R  N  H  R  N  E  A  *  T  V  I  V  *  L  G  M  Y  *  I  I  *  L  M  N  K  Y  L  I  L  L  V  S  *  T  I  H  S  L  F  Y  F  K  *  E   : Y  I  F  F  C  Q  C  C  F  Y  N  Y  L  T  *  L  F  F  N  S  L  F  G  S  L  I  R  K  M  L  L  M  D  C  L  S  G  V  G  Q  D  N  V  S  A  W  H  R  C  H  *  F  M  K  F  I  V  S  G  T  *  L  I  V  L  *  D  S  S  V  I  Y  N  I  F  L  N  R  V  P  N  F  L  N  I  I  L  S  V  I  N  D  P  K  *  N  K  K  I  *  M  H  L  T  I  H  N  I  Y  G  N  N  V  T  I  V  Y  F  D  L  H  L  *  V  I  K  Q  I  T  F  V  G  T  *  G  I  P  A  W  S  L  E  I  H  N  M  L  Y  K  R  V  S  T  H  G  R  K  T  *  G  I   : S  *  G  S  *  N  A  V  S  S  S  S  D  D  *  K  *  *  K  S  I  *  *  N  E  T  I  C  R  G  S  R  S  Y  F  N  G  V  N  E  C  G  L  S  G  N  A  I  E  L  *  S  *  L  Q  S  S  H  S  I  R  *  T  T  T  S  T  S  I  S  P  I  T  T  N  N  T  E  R  G  C  S  S  R  *  K  D  R  W  *  N  N  *  F  F  C  R  A  L  *  R  *  C  G  D  S  R  A  L  L  S  H  V  *  F  L  C  R  A  L  *  H  *  F  E  F  F  *  S  A  N  S  W  F  C  N  S  A  G  S  N  I  W  V  C  V  I  *  W  I  S  I  W  F  S  T  W  Y  A  *  I  S  Y  T  *  F  S  I  W  W  K  I  E  F  F  E   : L  T  V  F  D  D  S  R  F  N  A  G  A  S  Q  N  L  V  L  N  K  Q  N  S  P  R  R  T  S  R  L  H  K  S  T  R  C  G  T  G  S  H  Y  Q  N  E  E  D  F  E  N  E  D </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002M15.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90633" stop="90121"/>
                    <exon start="90023" stop="89895"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>639</number_coding_nucleotides>
                  <number_encoded_amino_acids>213</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KWRPETHTSHMRTGEATITLQDIEILFGMVVDGSPIILNGADSLGIIGRQEMIFQLTGWLPDTSCFSGVIRLLTYKLIEYIEGLEVINDNSTEHEVQQRFRLYLLWLCGGSIFPDKSNNKINLDILIDMRNLDLMSTQAWESDTLSYLYNCLCRASMKKSNEVCGFLSLVQIWAWERIIPLQPLPKPLRTNQLEASPALARKWTRGRNHRNEA*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002M15.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="89341" stop="89231"/>
                    <exon start="89148" stop="88711"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>546</number_coding_nucleotides>
                  <number_encoded_amino_acids>182</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SNRLLSLVHEAYPHGHWKSTTCCTKEYQHMAGRHEALVRGHEMQYRQARMIENDENQSNEMRQYAEEVARISMESMNAAFQGTRLSFDPDCNPPTQYDEPPPVQVSRRSRQTTPREGARRGRRTAGETTDFSAGPSNANVATPEPYYPTFDFYAGPSNTNSNFSSQQTVGFVTPQVPISGFA*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002M15.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88654" stop="88621"/>
                    <exon start="88519" stop="88362"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FSIWWKIEFFELTVFDDSRFNAGASQNLVLNKQNSPRRTSRLHKSTRCGTGSHYQNEEDFENED</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="89841" e_stop="89784"/>
            <exon e_start="89711" e_stop="89231"/>
            <exon e_start="89148" e_stop="88621"/>
            <exon e_start="88519" e_stop="88362"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.931"/>
          <exon-intron don_prob="0.905" acc_prob="1.000" e_score="0.967"/>
          <exon-intron don_prob="0.966" acc_prob="0.130" e_score="0.961"/>
          <exon-only e_score="0.968"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.931">
            <gDNA_exon_boundary e_start="89841" e_stop="89784" e_length="58"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="89783" i_stop="89712" i_length="72"/>
          </intron>
          <exon e_serial="2" e_score="0.967">
            <gDNA_exon_boundary e_start="89711" e_stop="89231" e_length="481"/>
          </exon>
          <intron i_serial="2" don_prob="0.905" acc_prob="1.000">
            <gDNA_intron_boundary i_start="89230" i_stop="89149" i_length="82"/>
          </intron>
          <exon e_serial="3" e_score="0.961">
            <gDNA_exon_boundary e_start="89148" e_stop="88621" e_length="528"/>
          </exon>
          <intron i_serial="3" don_prob="0.966" acc_prob="0.130">
            <gDNA_intron_boundary i_start="88620" i_stop="88520" i_length="101"/>
          </intron>
          <exon e_serial="4" e_score="0.968">
            <gDNA_exon_boundary e_start="88519" e_stop="88362" e_length="158"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89841" stop="89784"/>
              <exon start="89711" stop="89231"/>
              <exon start="89148" stop="89079"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274114" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89531" stop="89231"/>
              <exon start="89148" stop="89005"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273853" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89130" stop="88621"/>
              <exon start="88519" stop="88362"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538686" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89129" stop="88621"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E275102" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTAATATTATTAGTATCTTAAACTATTCATAGTTTATTTTATTTTAAATAAGAATAT : ATTTTTTTCTGCCAATGTTGTTTTTATAATTATCTTACTTAATTATTTTTTAATAGTTTATTTGGCAGCCTTATTCGGAAGATGTTATTAATGGATTGCCTGAGTGGTGTCGGTCAGGACAACGTGTCTGCATGGCACAGGTGCCACTGATTTATGAAATTTATCGTGAGTGGCACATGATTGATCGTGTTGTGAGACAGTTCGGTTATTTACAACATATTCCTGAACCGTGTACCCAATTTTCTGAATATCATTTTAAGTGTGATAAACGATCCAAAATAAAACAAGAAGATATAGATGCATTTAACTATACACAATATTTATGGGAACAACGTCACAATCGTATATTTCGACCTCCATTTGTAAGTGATCAAACAGATTACTTTCGTTGGTACATGAGGCATACCCGCATGGTCATTGGAAATCCACAACATGTTGTACAAAAGAGTATCAACACATGGCAGGAAGACATGAGGCATTA : GTTAGGGGTCATGAAATGCAGTATCGTCAAGCTCGGATGATTGAAAATGATGAAAATCAATCTAATGAAATGAGACAATATGCAGAGGAAGTCGCTCGTATTTCAATGGAGTCAATGAATGCGGCCTTTCAGGGAACGCGATTGAGCTTTGATCCTGATTGCAATCCTCCCACTCAATACGATGAACCACCACCAGTACAAGTATCTCGCCGATCACGACAAACAACACCGAGAGAGGGTGCTCGTCGAGGTAGAAGGACCGCTGGTGAAACAACTGATTTTTCTGCAGGGCCCTCTAACGCTAATGTGGCGACTCCCGAGCCTTATTATCCCACGTTTGATTTTTATGCAGGGCCCTCTAACACTAATTCGAATTTTTCTAGTCAGCAAACAGTTGGTTTTGTAACTCCGCAGGTTCCAATATCTGGGTTTGCGTAATTTAGTGGATCTCAATATGGTTTTCAACATGGTATGCGTGAATTTCCTATACATAATTCTCCATTTGGTGGAAGATTGAATTTTTCGAAT : TAACTGTATTTGATGATTCAAGATTTAATGCTGGGGCTTCACAAAATTTAGTTCTTAATAAACAAAATTCACCTCGGAGAACATCTAGGCTACACAAATCAACTAGATGTGGAACAGGCAGTCACTATCAAAATGAGGAAGATTTTGAAAATGAAGAT</gDNA_template>
            <first_frame> F  N  I  I  S  I  L  N  Y  S  *  F  I  L  F  *  I  R  I   : Y  F  F  L  P  M  L  F  L  *  L  S  Y  L  I  I  F  *  *  F  I  W  Q  P  Y  S  E  D  V  I  N  G  L  P  E  W  C  R  S  G  Q  R  V  C  M  A  Q  V  P  L  I  Y  E  I  Y  R  E  W  H  M  I  D  R  V  V  R  Q  F  G  Y  L  Q  H  I  P  E  P  C  T  Q  F  S  E  Y  H  F  K  C  D  K  R  S  K  I  K  Q  E  D  I  D  A  F  N  Y  T  Q  Y  L  W  E  Q  R  H  N  R  I  F  R  P  P  F  V  S  D  Q  T  D  Y  F  R  W  Y  M  R  H  T  R  M  V  I  G  N  P  Q  H  V  V  Q  K  S  I  N  T  W  Q  E  D  M  R  H  * :   L  G  V  M  K  C  S  I  V  K  L  G  *  L  K  M  M  K  I  N  L  M  K  *  D  N  M  Q  R  K  S  L  V  F  Q  W  S  Q  *  M  R  P  F  R  E  R  D  *  A  L  I  L  I  A  I  L  P  L  N  T  M  N  H  H  Q  Y  K  Y  L  A  D  H  D  K  Q  H  R  E  R  V  L  V  E  V  E  G  P  L  V  K  Q  L  I  F  L  Q  G  P  L  T  L  M  W  R  L  P  S  L  I  I  P  R  L  I  F  M  Q  G  P  L  T  L  I  R  I  F  L  V  S  K  Q  L  V  L  *  L  R  R  F  Q  Y  L  G  L  R  N  L  V  D  L  N  M  V  F  N  M  V  C  V  N  F  L  Y  I  I  L  H  L  V  E  D  *  I  F  R  I :   N  C  I  *  *  F  K  I  *  C  W  G  F  T  K  F  S  S  *  *  T  K  F  T  S  E  N  I  *  A  T  Q  I  N  *  M  W  N  R  Q  S  L  S  K  *  G  R  F  *  K  *  R  </first_frame>
            <second_frame>  L  I  L  L  V  S  *  T  I  H  S  L  F  Y  F  K  *  E  Y  :  I  F  F  C  Q  C  C  F  Y  N  Y  L  T  *  L  F  F  N  S  L  F  G  S  L  I  R  K  M  L  L  M  D  C  L  S  G  V  G  Q  D  N  V  S  A  W  H  R  C  H  *  F  M  K  F  I  V  S  G  T  *  L  I  V  L  *  D  S  S  V  I  Y  N  I  F  L  N  R  V  P  N  F  L  N  I  I  L  S  V  I  N  D  P  K  *  N  K  K  I  *  M  H  L  T  I  H  N  I  Y  G  N  N  V  T  I  V  Y  F  D  L  H  L  *  V  I  K  Q  I  T  F  V  G  T  *  G  I  P  A  W  S  L  E  I  H  N  M  L  Y  K  R  V  S  T  H  G  R  K  T  *  G  I   : S  *  G  S  *  N  A  V  S  S  S  S  D  D  *  K  *  *  K  S  I  *  *  N  E  T  I  C  R  G  S  R  S  Y  F  N  G  V  N  E  C  G  L  S  G  N  A  I  E  L  *  S  *  L  Q  S  S  H  S  I  R  *  T  T  T  S  T  S  I  S  P  I  T  T  N  N  T  E  R  G  C  S  S  R  *  K  D  R  W  *  N  N  *  F  F  C  R  A  L  *  R  *  C  G  D  S  R  A  L  L  S  H  V  *  F  L  C  R  A  L  *  H  *  F  E  F  F  *  S  A  N  S  W  F  C  N  S  A  G  S  N  I  W  V  C  V  I  *  W  I  S  I  W  F  S  T  W  Y  A  *  I  S  Y  T  *  F  S  I  W  W  K  I  E  F  F  E   : L  T  V  F  D  D  S  R  F  N  A  G  A  S  Q  N  L  V  L  N  K  Q  N  S  P  R  R  T  S  R  L  H  K  S  T  R  C  G  T  G  S  H  Y  Q  N  E  E  D  F  E  N  E  D </second_frame>
            <third_frame>   *  Y  Y  *  Y  L  K  L  F  I  V  Y  F  I  L  N  K  N  I :   F  F  S  A  N  V  V  F  I  I  I  L  L  N  Y  F  L  I  V  Y  L  A  A  L  F  G  R  C  Y  *  W  I  A  *  V  V  S  V  R  T  T  C  L  H  G  T  G  A  T  D  L  *  N  L  S  *  V  A  H  D  *  S  C  C  E  T  V  R  L  F  T  T  Y  S  *  T  V  Y  P  I  F  *  I  S  F  *  V  *  *  T  I  Q  N  K  T  R  R  Y  R  C  I  *  L  Y  T  I  F  M  G  T  T  S  Q  S  Y  I  S  T  S  I  C  K  *  S  N  R  L  L  S  L  V  H  E  A  Y  P  H  G  H  W  K  S  T  T  C  C  T  K  E  Y  Q  H  M  A  G  R  H  E  A  L  :  V  R  G  H  E  M  Q  Y  R  Q  A  R  M  I  E  N  D  E  N  Q  S  N  E  M  R  Q  Y  A  E  E  V  A  R  I  S  M  E  S  M  N  A  A  F  Q  G  T  R  L  S  F  D  P  D  C  N  P  P  T  Q  Y  D  E  P  P  P  V  Q  V  S  R  R  S  R  Q  T  T  P  R  E  G  A  R  R  G  R  R  T  A  G  E  T  T  D  F  S  A  G  P  S  N  A  N  V  A  T  P  E  P  Y  Y  P  T  F  D  F  Y  A  G  P  S  N  T  N  S  N  F  S  S  Q  Q  T  V  G  F  V  T  P  Q  V  P  I  S  G  F  A  *  F  S  G  S  Q  Y  G  F  Q  H  G  M  R  E  F  P  I  H  N  S  P  F  G  G  R  L  N  F  S  N  :  *  L  Y  L  M  I  Q  D  L  M  L  G  L  H  K  I  *  F  L  I  N  K  I  H  L  G  E  H  L  G  Y  T  N  Q  L  D  V  E  Q  A  V  T  I  K  M  R  K  I  L  K  M  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002M15.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="89341" stop="89231"/>
                    <exon start="89148" stop="88711"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>546</number_coding_nucleotides>
                  <number_encoded_amino_acids>182</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SNRLLSLVHEAYPHGHWKSTTCCTKEYQHMAGRHEALVRGHEMQYRQARMIENDENQSNEMRQYAEEVARISMESMNAAFQGTRLSFDPDCNPPTQYDEPPPVQVSRRSRQTTPREGARRGRRTAGETTDFSAGPSNANVATPEPYYPTFDFYAGPSNTNSNFSSQQTVGFVTPQVPISGFA*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002M15.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88654" stop="88621"/>
                    <exon start="88519" stop="88362"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FSIWWKIEFFELTVFDDSRFNAGASQNLVLNKQNSPRRTSRLHKSTRCGTGSHYQNEEDFENED</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="91097" e_stop="91043"/>
            <exon e_start="90913" e_stop="89777"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.939" acc_prob="0.991" e_score="0.982"/>
          <exon-only e_score="0.965"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.982">
            <gDNA_exon_boundary e_start="91097" e_stop="91043" e_length="55"/>
          </exon>
          <intron i_serial="1" don_prob="0.939" acc_prob="0.991">
            <gDNA_intron_boundary i_start="91042" i_stop="90914" i_length="129"/>
          </intron>
          <exon e_serial="2" e_score="0.965">
            <gDNA_exon_boundary e_start="90913" e_stop="89777" e_length="1137"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91097" stop="91043"/>
              <exon start="90913" stop="90318"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273357" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90379" stop="89777"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276340" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATTCTTGTTATTCTTCAAATTTTCTAAAGTTTTTAAAAGCATTTTCTTTATAAG : ATATGCATCTGTCAAATTTATACCTACATCCTGATCCAGTAGAGCATGATGTATTAAAAATTCAAGTTCATCATCGTTCTGAAGGAATTTGGAATGGTAGCATAAAAGAAAAGAGGACTTGCTTATATACGCGTCGTGGTGATATTGAATTTTGGCAACATTTAAAATATCATCCATTACATTCTCGCATCCTTCAATATTTTGAAAATTGTAGATTTAAAGTAATTCTTGATGTTGGATGTGTGTCGTATGACTCCGGATTAATTTCTGCTTTAATTGAAAGTGGCGTCCGGAAACTCATACTTCTCACATGCGAACTGGCGAGGCTACCATAACTTTACAAGATATTGAAATTTTATTCGGAATGGTAGTAGATGGTAGTCCTATAATTTTAAATGGAGCTGATTCTTTAGGGATTATAGGTAGACAAGAAATGATTTTTCAATTAACAGGATGGTTACCCGATACTAGTTGTTTTTCTGGTGTTATTAGATTGTTAACATATAAATTGATTGAGTATATCGAAGGTTTGGAAGTTATTAATGATAACTCAACTGAGCATGAAGTTCAACAAAGATTTAGATTATATTTATTATGGTTATGTGGTGGATCAATATTTCCGGATAAATCTAATAATAAGATTAATTTGGACATTTTGATTGACATGAGAAATTTAGATTTAATGTCAACTCAAGCATGGGAATCGGACACATTATCATATTTGTATAATTGTTTATGCCGTGCGTCAATGAAAAAATCAAATGAAGTTTGTGGATTTCTCTCTTTAGTGCAGGTATACATATTTTTTAATTAAATATTTTTTATATACTAGTAATATGCACTTTTAAATTTAAGTGCATTATAAGTAATGGTGAATTTATTTATTGTAGATTTGGGCATGGGAAAGAATTATTCCCCTGCAACCATTGCCAAAGCCTCTAAGAACCAATCAACTTGAGGCTTCACCTGCGCTTGCACGTAAATGGACGCGAGGTAGAAATCATCGAAATGAGGCATGAACTGTAATCGTGTGATTAGGGATGTACTAGATAATCTAACTGATGAACAAGTATTTAATATTATTAGTATCTTAAACTATTCATAGTTTATTTTATTTTAAATAAGAATATATTTGGT</gDNA_template>
            <first_frame> N  S  C  Y  S  S  N  F  L  K  F  L  K  A  F  S  L  *   : D  M  H  L  S  N  L  Y  L  H  P  D  P  V  E  H  D  V  L  K  I  Q  V  H  H  R  S  E  G  I  W  N  G  S  I  K  E  K  R  T  C  L  Y  T  R  R  G  D  I  E  F  W  Q  H  L  K  Y  H  P  L  H  S  R  I  L  Q  Y  F  E  N  C  R  F  K  V  I  L  D  V  G  C  V  S  Y  D  S  G  L  I  S  A  L  I  E  S  G  V  R  K  L  I  L  L  T  C  E  L  A  R  L  P  *  L  Y  K  I  L  K  F  Y  S  E  W  *  *  M  V  V  L  *  F  *  M  E  L  I  L  *  G  L  *  V  D  K  K  *  F  F  N  *  Q  D  G  Y  P  I  L  V  V  F  L  V  L  L  D  C  *  H  I  N  *  L  S  I  S  K  V  W  K  L  L  M  I  T  Q  L  S  M  K  F  N  K  D  L  D  Y  I  Y  Y  G  Y  V  V  D  Q  Y  F  R  I  N  L  I  I  R  L  I  W  T  F  *  L  T  *  E  I  *  I  *  C  Q  L  K  H  G  N  R  T  H  Y  H  I  C  I  I  V  Y  A  V  R  Q  *  K  N  Q  M  K  F  V  D  F  S  L  *  C  R  Y  T  Y  F  L  I  K  Y  F  L  Y  T  S  N  M  H  F  *  I  *  V  H  Y  K  *  W  *  I  Y  L  L  *  I  W  A  W  E  R  I  I  P  L  Q  P  L  P  K  P  L  R  T  N  Q  L  E  A  S  P  A  L  A  R  K  W  T  R  G  R  N  H  R  N  E  A  *  T  V  I  V  *  L  G  M  Y  *  I  I  *  L  M  N  K  Y  L  I  L  L  V  S  *  T  I  H  S  L  F  Y  F  K  *  E  Y  I  W  </first_frame>
            <second_frame>  I  L  V  I  L  Q  I  F  *  S  F  *  K  H  F  L  Y  K  :  I  C  I  C  Q  I  Y  T  Y  I  L  I  Q  *  S  M  M  Y  *  K  F  K  F  I  I  V  L  K  E  F  G  M  V  A  *  K  K  R  G  L  A  Y  I  R  V  V  V  I  L  N  F  G  N  I  *  N  I  I  H  Y  I  L  A  S  F  N  I  L  K  I  V  D  L  K  *  F  L  M  L  D  V  C  R  M  T  P  D  *  F  L  L  *  L  K  V  A  S  G  N  S  Y  F  S  H  A  N  W  R  G  Y  H  N  F  T  R  Y  *  N  F  I  R  N  G  S  R  W  *  S  Y  N  F  K  W  S  *  F  F  R  D  Y  R  *  T  R  N  D  F  S  I  N  R  M  V  T  R  Y  *  L  F  F  W  C  Y  *  I  V  N  I  *  I  D  *  V  Y  R  R  F  G  S  Y  *  *  *  L  N  *  A  *  S  S  T  K  I  *  I  I  F  I  M  V  M  W  W  I  N  I  S  G  *  I  *  *  *  D  *  F  G  H  F  D  *  H  E  K  F  R  F  N  V  N  S  S  M  G  I  G  H  I  I  I  F  V  *  L  F  M  P  C  V  N  E  K  I  K  *  S  L  W  I  S  L  F  S  A  G  I  H  I  F  *  L  N  I  F  Y  I  L  V  I  C  T  F  K  F  K  C  I  I  S  N  G  E  F  I  Y  C  R  F  G  H  G  K  E  L  F  P  C  N  H  C  Q  S  L  *  E  P  I  N  L  R  L  H  L  R  L  H  V  N  G  R  E  V  E  I  I  E  M  R  H  E  L  *  S  C  D  *  G  C  T  R  *  S  N  *  *  T  S  I  *  Y  Y  *  Y  L  K  L  F  I  V  Y  F  I  L  N  K  N  I  F  G </second_frame>
            <third_frame>   F  L  L  F  F  K  F  S  K  V  F  K  S  I  F  F  I  R :   Y  A  S  V  K  F  I  P  T  S  *  S  S  R  A  *  C  I  K  N  S  S  S  S  S  F  *  R  N  L  E  W  *  H  K  R  K  E  D  L  L  I  Y  A  S  W  *  Y  *  I  L  A  T  F  K  I  S  S  I  T  F  S  H  P  S  I  F  *  K  L  *  I  *  S  N  S  *  C  W  M  C  V  V  *  L  R  I  N  F  C  F  N  *  K  W  R  P  E  T  H  T  S  H  M  R  T  G  E  A  T  I  T  L  Q  D  I  E  I  L  F  G  M  V  V  D  G  S  P  I  I  L  N  G  A  D  S  L  G  I  I  G  R  Q  E  M  I  F  Q  L  T  G  W  L  P  D  T  S  C  F  S  G  V  I  R  L  L  T  Y  K  L  I  E  Y  I  E  G  L  E  V  I  N  D  N  S  T  E  H  E  V  Q  Q  R  F  R  L  Y  L  L  W  L  C  G  G  S  I  F  P  D  K  S  N  N  K  I  N  L  D  I  L  I  D  M  R  N  L  D  L  M  S  T  Q  A  W  E  S  D  T  L  S  Y  L  Y  N  C  L  C  R  A  S  M  K  K  S  N  E  V  C  G  F  L  S  L  V  Q  V  Y  I  F  F  N  *  I  F  F  I  Y  *  *  Y  A  L  L  N  L  S  A  L  *  V  M  V  N  L  F  I  V  D  L  G  M  G  K  N  Y  S  P  A  T  I  A  K  A  S  K  N  Q  S  T  *  G  F  T  C  A  C  T  *  M  D  A  R  *  K  S  S  K  *  G  M  N  C  N  R  V  I  R  D  V  L  D  N  L  T  D  E  Q  V  F  N  I  I  S  I  L  N  Y  S  *  F  I  L  F  *  I  R  I  Y  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002M15.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90633" stop="90100"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>531</number_coding_nucleotides>
                  <number_encoded_amino_acids>177</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KWRPETHTSHMRTGEATITLQDIEILFGMVVDGSPIILNGADSLGIIGRQEMIFQLTGWLPDTSCFSGVIRLLTYKLIEYIEGLEVINDNSTEHEVQQRFRLYLLWLCGGSIFPDKSNNKINLDILIDMRNLDLMSTQAWESDTLSYLYNCLCRASMKKSNEVCGFLSLVQVYIFFN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="91097" e_stop="91043"/>
            <exon e_start="90913" e_stop="89779"/>
            <exon e_start="89706" e_stop="89659"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.939" acc_prob="0.991" e_score="0.982"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.965"/>
          <exon-only e_score="0.979"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.982">
            <gDNA_exon_boundary e_start="91097" e_stop="91043" e_length="55"/>
          </exon>
          <intron i_serial="1" don_prob="0.939" acc_prob="0.991">
            <gDNA_intron_boundary i_start="91042" i_stop="90914" i_length="129"/>
          </intron>
          <exon e_serial="2" e_score="0.965">
            <gDNA_exon_boundary e_start="90913" e_stop="89779" e_length="1135"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="89778" i_stop="89707" i_length="72"/>
          </intron>
          <exon e_serial="3" e_score="0.979">
            <gDNA_exon_boundary e_start="89706" e_stop="89659" e_length="48"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91097" stop="91043"/>
              <exon start="90913" stop="90318"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273357" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90384" stop="89779"/>
              <exon start="89706" stop="89659"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276288" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATTCTTGTTATTCTTCAAATTTTCTAAAGTTTTTAAAAGCATTTTCTTTATAAG : ATATGCATCTGTCAAATTTATACCTACATCCTGATCCAGTAGAGCATGATGTATTAAAAATTCAAGTTCATCATCGTTCTGAAGGAATTTGGAATGGTAGCATAAAAGAAAAGAGGACTTGCTTATATACGCGTCGTGGTGATATTGAATTTTGGCAACATTTAAAATATCATCCATTACATTCTCGCATCCTTCAATATTTTGAAAATTGTAGATTTAAAGTAATTCTTGATGTTGGATGTGTGTCGTATGACTCCGGATTAATTTCTGCTTTAATTGAAAGTGGCGTCCGGAAACTCATACTTCTCACATGCGAACTGGCGAGGCTACCATAACTTTACAAGATATTGAAATTTTATTCGGAATGGTAGTAGATGGTAGTCCTATAATTTTAAATGGAGCTGATTCTTTAGGGATTATAGGTAGACAAGAAATGATTTTTCAATTAACAGGATGGTTACCCGATACTAGTTGTTTTTCTGGTGTTATTAGATTGTTAACATATAAATTGATTGAGTATATCGAAGGTTTGGAAGTTATTAATGATAACTCAACTGAGCATGAAGTTCAACAAAGATTTAGATTATATTTATTATGGTTATGTGGTGGATCAATATTTCCGGATAAATCTAATAATAAGATTAATTTGGACATTTTGATTGACATGAGAAATTTAGATTTAATGTCAACTCAAGCATGGGAATCGGACACATTATCATATTTGTATAATTGTTTATGCCGTGCGTCAATGAAAAAATCAAATGAAGTTTGTGGATTTCTCTCTTTAGTGCAGGTATACATATTTTTTAATTAAATATTTTTTATATACTAGTAATATGCACTTTTAAATTTAAGTGCATTATAAGTAATGGTGAATTTATTTATTGTAGATTTGGGCATGGGAAAGAATTATTCCCCTGCAACCATTGCCAAAGCCTCTAAGAACCAATCAACTTGAGGCTTCACCTGCGCTTGCACGTAAATGGACGCGAGGTAGAAATCATCGAAATGAGGCATGAACTGTAATCGTGTGATTAGGGATGTACTAGATAATCTAACTGATGAACAAGTATTTAATATTATTAGTATCTTAAACTATTCATAGTTTATTTTATTTTAAATAAGAATATATTTG : TTTCTGCCAATGTTGTTTTTATAATTATCTTACTTAATTATTTTTTAA</gDNA_template>
            <first_frame> N  S  C  Y  S  S  N  F  L  K  F  L  K  A  F  S  L  *   : D  M  H  L  S  N  L  Y  L  H  P  D  P  V  E  H  D  V  L  K  I  Q  V  H  H  R  S  E  G  I  W  N  G  S  I  K  E  K  R  T  C  L  Y  T  R  R  G  D  I  E  F  W  Q  H  L  K  Y  H  P  L  H  S  R  I  L  Q  Y  F  E  N  C  R  F  K  V  I  L  D  V  G  C  V  S  Y  D  S  G  L  I  S  A  L  I  E  S  G  V  R  K  L  I  L  L  T  C  E  L  A  R  L  P  *  L  Y  K  I  L  K  F  Y  S  E  W  *  *  M  V  V  L  *  F  *  M  E  L  I  L  *  G  L  *  V  D  K  K  *  F  F  N  *  Q  D  G  Y  P  I  L  V  V  F  L  V  L  L  D  C  *  H  I  N  *  L  S  I  S  K  V  W  K  L  L  M  I  T  Q  L  S  M  K  F  N  K  D  L  D  Y  I  Y  Y  G  Y  V  V  D  Q  Y  F  R  I  N  L  I  I  R  L  I  W  T  F  *  L  T  *  E  I  *  I  *  C  Q  L  K  H  G  N  R  T  H  Y  H  I  C  I  I  V  Y  A  V  R  Q  *  K  N  Q  M  K  F  V  D  F  S  L  *  C  R  Y  T  Y  F  L  I  K  Y  F  L  Y  T  S  N  M  H  F  *  I  *  V  H  Y  K  *  W  *  I  Y  L  L  *  I  W  A  W  E  R  I  I  P  L  Q  P  L  P  K  P  L  R  T  N  Q  L  E  A  S  P  A  L  A  R  K  W  T  R  G  R  N  H  R  N  E  A  *  T  V  I  V  *  L  G  M  Y  *  I  I  *  L  M  N  K  Y  L  I  L  L  V  S  *  T  I  H  S  L  F  Y  F  K  *  E  Y  I  C :   F  C  Q  C  C  F  Y  N  Y  L  T  *  L  F  F   </first_frame>
            <second_frame>  I  L  V  I  L  Q  I  F  *  S  F  *  K  H  F  L  Y  K  :  I  C  I  C  Q  I  Y  T  Y  I  L  I  Q  *  S  M  M  Y  *  K  F  K  F  I  I  V  L  K  E  F  G  M  V  A  *  K  K  R  G  L  A  Y  I  R  V  V  V  I  L  N  F  G  N  I  *  N  I  I  H  Y  I  L  A  S  F  N  I  L  K  I  V  D  L  K  *  F  L  M  L  D  V  C  R  M  T  P  D  *  F  L  L  *  L  K  V  A  S  G  N  S  Y  F  S  H  A  N  W  R  G  Y  H  N  F  T  R  Y  *  N  F  I  R  N  G  S  R  W  *  S  Y  N  F  K  W  S  *  F  F  R  D  Y  R  *  T  R  N  D  F  S  I  N  R  M  V  T  R  Y  *  L  F  F  W  C  Y  *  I  V  N  I  *  I  D  *  V  Y  R  R  F  G  S  Y  *  *  *  L  N  *  A  *  S  S  T  K  I  *  I  I  F  I  M  V  M  W  W  I  N  I  S  G  *  I  *  *  *  D  *  F  G  H  F  D  *  H  E  K  F  R  F  N  V  N  S  S  M  G  I  G  H  I  I  I  F  V  *  L  F  M  P  C  V  N  E  K  I  K  *  S  L  W  I  S  L  F  S  A  G  I  H  I  F  *  L  N  I  F  Y  I  L  V  I  C  T  F  K  F  K  C  I  I  S  N  G  E  F  I  Y  C  R  F  G  H  G  K  E  L  F  P  C  N  H  C  Q  S  L  *  E  P  I  N  L  R  L  H  L  R  L  H  V  N  G  R  E  V  E  I  I  E  M  R  H  E  L  *  S  C  D  *  G  C  T  R  *  S  N  *  *  T  S  I  *  Y  Y  *  Y  L  K  L  F  I  V  Y  F  I  L  N  K  N  I  F   : V  S  A  N  V  V  F  I  I  I  L  L  N  Y  F  L  </second_frame>
            <third_frame>   F  L  L  F  F  K  F  S  K  V  F  K  S  I  F  F  I  R :   Y  A  S  V  K  F  I  P  T  S  *  S  S  R  A  *  C  I  K  N  S  S  S  S  S  F  *  R  N  L  E  W  *  H  K  R  K  E  D  L  L  I  Y  A  S  W  *  Y  *  I  L  A  T  F  K  I  S  S  I  T  F  S  H  P  S  I  F  *  K  L  *  I  *  S  N  S  *  C  W  M  C  V  V  *  L  R  I  N  F  C  F  N  *  K  W  R  P  E  T  H  T  S  H  M  R  T  G  E  A  T  I  T  L  Q  D  I  E  I  L  F  G  M  V  V  D  G  S  P  I  I  L  N  G  A  D  S  L  G  I  I  G  R  Q  E  M  I  F  Q  L  T  G  W  L  P  D  T  S  C  F  S  G  V  I  R  L  L  T  Y  K  L  I  E  Y  I  E  G  L  E  V  I  N  D  N  S  T  E  H  E  V  Q  Q  R  F  R  L  Y  L  L  W  L  C  G  G  S  I  F  P  D  K  S  N  N  K  I  N  L  D  I  L  I  D  M  R  N  L  D  L  M  S  T  Q  A  W  E  S  D  T  L  S  Y  L  Y  N  C  L  C  R  A  S  M  K  K  S  N  E  V  C  G  F  L  S  L  V  Q  V  Y  I  F  F  N  *  I  F  F  I  Y  *  *  Y  A  L  L  N  L  S  A  L  *  V  M  V  N  L  F  I  V  D  L  G  M  G  K  N  Y  S  P  A  T  I  A  K  A  S  K  N  Q  S  T  *  G  F  T  C  A  C  T  *  M  D  A  R  *  K  S  S  K  *  G  M  N  C  N  R  V  I  R  D  V  L  D  N  L  T  D  E  Q  V  F  N  I  I  S  I  L  N  Y  S  *  F  I  L  F  *  I  R  I  Y  L  :  F  L  P  M  L  F  L  *  L  S  Y  L  I  I  F  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002M15.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90633" stop="90100"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>531</number_coding_nucleotides>
                  <number_encoded_amino_acids>177</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KWRPETHTSHMRTGEATITLQDIEILFGMVVDGSPIILNGADSLGIIGRQEMIFQLTGWLPDTSCFSGVIRLLTYKLIEYIEGLEVINDNSTEHEVQQRFRLYLLWLCGGSIFPDKSNNKINLDILIDMRNLDLMSTQAWESDTLSYLYNCLCRASMKKSNEVCGFLSLVQVYIFFN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="96124" PGL_stop="96717"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="96124" e_stop="96717"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.938"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.938">
            <gDNA_exon_boundary e_start="96124" e_stop="96717" e_length="594"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96124" stop="96717"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E447237" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96261" stop="96423"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E447233" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTCAAAGTGAATTAAATTCTTCGAACCCAAGTGGTCCTCTTACACATCAAACCTATAACAAGGATCGTGATCGTGAAAACTTTGCTAAAATGGTTGTTGTTTGTGGTTCACCTTTTAATTTTGGAGAACATCCAAATTTTATTGCATATATTCGTGAAACATATAATCCTAGTTATAAAGGTTTATCAAGAAGCATGGTAAAAAGATATATTTTTGAATTTCAAGAAAAACATTGTCAATATTTACGTGCCTATTTTGAACTAATGGATTATAGAGTTGCTATTACTACTGATATGGGTCGTAGTCCTAATGGTTTTGATTATTTAACTGTTACTGCGCATTGGATCGATTAATAATTGGAATTTACAAAAAAGAATTATGGTTATAAAATTTGTCAAAAAAAACCCGGAATTTATATTGCTACTACTGTGTTGGAAATTTTAGATTTTTTCGTTCTTTGTGATAAAGTCGTTAGTATTACTTTAGATAATGCTTCTGCTAATTTAAATGCTATTAATATGCTAGAACCTAGACTTTGTCCTATTAGTAAATATGTTTTTCATGTTAGATGTTCCGCGCATATATTAAATTTG</gDNA_template>
            <first_frame> V  Q  S  E  L  N  S  S  N  P  S  G  P  L  T  H  Q  T  Y  N  K  D  R  D  R  E  N  F  A  K  M  V  V  V  C  G  S  P  F  N  F  G  E  H  P  N  F  I  A  Y  I  R  E  T  Y  N  P  S  Y  K  G  L  S  R  S  M  V  K  R  Y  I  F  E  F  Q  E  K  H  C  Q  Y  L  R  A  Y  F  E  L  M  D  Y  R  V  A  I  T  T  D  M  G  R  S  P  N  G  F  D  Y  L  T  V  T  A  H  W  I  D  *  *  L  E  F  T  K  K  N  Y  G  Y  K  I  C  Q  K  K  P  G  I  Y  I  A  T  T  V  L  E  I  L  D  F  F  V  L  C  D  K  V  V  S  I  T  L  D  N  A  S  A  N  L  N  A  I  N  M  L  E  P  R  L  C  P  I  S  K  Y  V  F  H  V  R  C  S  A  H  I  L  N  L </first_frame>
            <second_frame>  F  K  V  N  *  I  L  R  T  Q  V  V  L  L  H  I  K  P  I  T  R  I  V  I  V  K  T  L  L  K  W  L  L  F  V  V  H  L  L  I  L  E  N  I  Q  I  L  L  H  I  F  V  K  H  I  I  L  V  I  K  V  Y  Q  E  A  W  *  K  D  I  F  L  N  F  K  K  N  I  V  N  I  Y  V  P  I  L  N  *  W  I  I  E  L  L  L  L  L  I  W  V  V  V  L  M  V  L  I  I  *  L  L  L  R  I  G  S  I  N  N  W  N  L  Q  K  R  I  M  V  I  K  F  V  K  K  N  P  E  F  I  L  L  L  L  C  W  K  F  *  I  F  S  F  F  V  I  K  S  L  V  L  L  *  I  M  L  L  L  I  *  M  L  L  I  C  *  N  L  D  F  V  L  L  V  N  M  F  F  M  L  D  V  P  R  I  Y  *  I   </second_frame>
            <third_frame>   S  K  *  I  K  F  F  E  P  K  W  S  S  Y  T  S  N  L  *  Q  G  S  *  S  *  K  L  C  *  N  G  C  C  L  W  F  T  F  *  F  W  R  T  S  K  F  Y  C  I  Y  S  *  N  I  *  S  *  L  *  R  F  I  K  K  H  G  K  K  I  Y  F  *  I  S  R  K  T  L  S  I  F  T  C  L  F  *  T  N  G  L  *  S  C  Y  Y  Y  *  Y  G  S  *  S  *  W  F  *  L  F  N  C  Y  C  A  L  D  R  L  I  I  G  I  Y  K  K  E  L  W  L  *  N  L  S  K  K  T  R  N  L  Y  C  Y  Y  C  V  G  N  F  R  F  F  R  S  L  *  *  S  R  *  Y  Y  F  R  *  C  F  C  *  F  K  C  Y  *  Y  A  R  T  *  T  L  S  Y  *  *  I  C  F  S  C  *  M  F  R  A  Y  I  K  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002M15.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="96124" stop="96477"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>351</number_coding_nucleotides>
                  <number_encoded_amino_acids>117</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VQSELNSSNPSGPLTHQTYNKDRDRENFAKMVVVCGSPFNFGEHPNFIAYIRETYNPSYKGLSRSMVKRYIFEFQEKHCQYLRAYFELMDYRVAITTDMGRSPNGFDYLTVTAHWID*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002M15.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="96481" stop="96717"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LEFTKKNYGYKICQKKPGIYIATTVLEILDFFVLCDKVVSITLDNASANLNAINMLEPRLCPISKYVFHVRCSAHILNL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="97447" PGL_stop="98021"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="97447" e_stop="98021"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.944"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.944">
            <gDNA_exon_boundary e_start="97447" e_stop="98021" e_length="575"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97447" stop="98021"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342749" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAACTTGGTCGTGACTCTTCTAATAAATGTGAATTTGTTAAATATCTTGAACAGGGTACGGATGATATTACAAACAATGAAGGTATACCGCAACTATTGAACTGGTGGAGGAATCGTGGAACTCAATTCCCAAAACTTAGTAGGATGGTGAAAGATGTGCTTGTAATTTAAGGATCATCAGTAGCTTCGGAGGCAGCTTTCAGCGCGGTAAGATTTCAAATTGGAGACCACAGATATTCGTTAGCAGGAGACAGCTTGGAGATATCAGTGTTATTTAGAGACTGGATAAATGGTGAGCGTAGAAATCAAGGACTTCCAATGTTAGAAAGTCAATTTGAACTTTTCATAGATTCAGCTATTGGATGTGGTAGTGATGATGACATCGAACTTCAAGATCGTCAACGAGCTTTACCAAGACCAGAAGTTGATTACAATCAATTCATAGCTGAGTTAGAAAGAGGATTTACGGGACTATACAACTATTAGTATTACATTCGAGACTTAGTTGAAACAGAACCCTTCCTAGAAGGTGGATGTGTAAACTATGTACCCTACTAATAGTTGTAAATTGAAAT</gDNA_template>
            <first_frame> K  L  G  R  D  S  S  N  K  C  E  F  V  K  Y  L  E  Q  G  T  D  D  I  T  N  N  E  G  I  P  Q  L  L  N  W  W  R  N  R  G  T  Q  F  P  K  L  S  R  M  V  K  D  V  L  V  I  *  G  S  S  V  A  S  E  A  A  F  S  A  V  R  F  Q  I  G  D  H  R  Y  S  L  A  G  D  S  L  E  I  S  V  L  F  R  D  W  I  N  G  E  R  R  N  Q  G  L  P  M  L  E  S  Q  F  E  L  F  I  D  S  A  I  G  C  G  S  D  D  D  I  E  L  Q  D  R  Q  R  A  L  P  R  P  E  V  D  Y  N  Q  F  I  A  E  L  E  R  G  F  T  G  L  Y  N  Y  *  Y  Y  I  R  D  L  V  E  T  E  P  F  L  E  G  G  C  V  N  Y  V  P  Y  *  *  L  *  I  E   </first_frame>
            <second_frame>  N  L  V  V  T  L  L  I  N  V  N  L  L  N  I  L  N  R  V  R  M  I  L  Q  T  M  K  V  Y  R  N  Y  *  T  G  G  G  I  V  E  L  N  S  Q  N  L  V  G  W  *  K  M  C  L  *  F  K  D  H  Q  *  L  R  R  Q  L  S  A  R  *  D  F  K  L  E  T  T  D  I  R  *  Q  E  T  A  W  R  Y  Q  C  Y  L  E  T  G  *  M  V  S  V  E  I  K  D  F  Q  C  *  K  V  N  L  N  F  S  *  I  Q  L  L  D  V  V  V  M  M  T  S  N  F  K  I  V  N  E  L  Y  Q  D  Q  K  L  I  T  I  N  S  *  L  S  *  K  E  D  L  R  D  Y  T  T  I  S  I  T  F  E  T  *  L  K  Q  N  P  S  *  K  V  D  V  *  T  M  Y  P  T  N  S  C  K  L  K  </second_frame>
            <third_frame>   T  W  S  *  L  F  *  *  M  *  I  C  *  I  S  *  T  G  Y  G  *  Y  Y  K  Q  *  R  Y  T  A  T  I  E  L  V  E  E  S  W  N  S  I  P  K  T  *  *  D  G  E  R  C  A  C  N  L  R  I  I  S  S  F  G  G  S  F  Q  R  G  K  I  S  N  W  R  P  Q  I  F  V  S  R  R  Q  L  G  D  I  S  V  I  *  R  L  D  K  W  *  A  *  K  S  R  T  S  N  V  R  K  S  I  *  T  F  H  R  F  S  Y  W  M  W  *  *  *  *  H  R  T  S  R  S  S  T  S  F  T  K  T  R  S  *  L  Q  S  I  H  S  *  V  R  K  R  I  Y  G  T  I  Q  L  L  V  L  H  S  R  L  S  *  N  R  T  L  P  R  R  W  M  C  K  L  C  T  L  L  I  V  V  N  *  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002M15.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="97618" stop="97932"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>312</number_coding_nucleotides>
                  <number_encoded_amino_acids>104</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GSSVASEAAFSAVRFQIGDHRYSLAGDSLEISVLFRDWINGERRNQGLPMLESQFELFIDSAIGCGSDDDIELQDRQRALPRPEVDYNQFIAELERGFTGLYNY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="100860" PGL_stop="101219"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="100860" e_stop="101219"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="100860" e_stop="101219" e_length="360"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100860" stop="101219"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312518" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTCTGGATTGGTATTAGACCAGTACTTATGGAACAGGGTTTTAATGATGCATGTCAAATGTAAGATGATGTTAGATGCACGTAGCATATTTGATGAAATGCCCGAGAGGAACTCGATTTCTTGGAATACAATGGTTGGAGGGCTAGTTGATTTGGGGGATTATTTGGAGGCATTTAGGTTGTTTTTTATGATGTGGGAAGAGAATTCTGCTGCTGATCCTCGGATATTTGCGACAATGATTCGAGCATCTTCTGGATTAGAGGTTATTTCTTTGGGACAGCAATTGCATTCTTGTGCTTTGAAAATGGGGGAAGGCGACAATCGTTTTATATCTTGTGCTTTAATTGATATGTATAGCAA</gDNA_template>
            <first_frame> F  W  I  G  I  R  P  V  L  M  E  Q  G  F  N  D  A  C  Q  M  *  D  D  V  R  C  T  *  H  I  *  *  N  A  R  E  E  L  D  F  L  E  Y  N  G  W  R  A  S  *  F  G  G  L  F  G  G  I  *  V  V  F  Y  D  V  G  R  E  F  C  C  *  S  S  D  I  C  D  N  D  S  S  I  F  W  I  R  G  Y  F  F  G  T  A  I  A  F  L  C  F  E  N  G  G  R  R  Q  S  F  Y  I  L  C  F  N  *  Y  V  *  Q </first_frame>
            <second_frame>  S  G  L  V  L  D  Q  Y  L  W  N  R  V  L  M  M  H  V  K  C  K  M  M  L  D  A  R  S  I  F  D  E  M  P  E  R  N  S  I  S  W  N  T  M  V  G  G  L  V  D  L  G  D  Y  L  E  A  F  R  L  F  F  M  M  W  E  E  N  S  A  A  D  P  R  I  F  A  T  M  I  R  A  S  S  G  L  E  V  I  S  L  G  Q  Q  L  H  S  C  A  L  K  M  G  E  G  D  N  R  F  I  S  C  A  L  I  D  M  Y  S   </second_frame>
            <third_frame>   L  D  W  Y  *  T  S  T  Y  G  T  G  F  *  *  C  M  S  N  V  R  *  C  *  M  H  V  A  Y  L  M  K  C  P  R  G  T  R  F  L  G  I  Q  W  L  E  G  *  L  I  W  G  I  I  W  R  H  L  G  C  F  L  *  C  G  K  R  I  L  L  L  I  L  G  Y  L  R  Q  *  F  E  H  L  L  D  *  R  L  F  L  W  D  S  N  C  I  L  V  L  *  K  W  G  K  A  T  I  V  L  Y  L  V  L  *  L  I  C  I  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002M15.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="100861" stop="101217"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>357</number_coding_nucleotides>
                  <number_encoded_amino_acids>119</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SGLVLDQYLWNRVLMMHVKCKMMLDARSIFDEMPERNSISWNTMVGGLVDLGDYLEAFRLFFMMWEENSAADPRIFATMIRASSGLEVISLGQQLHSCALKMGEGDNRFISCALIDMYS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="+" PGL_start="108482" PGL_stop="109452"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="108482" e_stop="109452"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.912"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.912">
            <gDNA_exon_boundary e_start="108482" e_stop="109452" e_length="971"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108482" stop="109064"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E561175" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108552" stop="109281"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E481787" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108843" stop="109452"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567920" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGATTATTTAACTGTTATTGCGCATTGGATTGGTTATAATTGAAATTTACAAAAAAAAATTATTGGTTATAAAATTTGTCAAAAGAAAAAAATGAAATGTATATTGCTATTACCGTGTTGAAAATTTTAGATTTTTTTGGTCTTTCCGATAAAGTCATTAGTATTACTTTAGATAATGCTTTTGCTAATTTAAATGCTATTAATATGTTAGAACCTAGACTTTGTCCGATTAGTAAATATGTTTTTCATGTTAGATGTGCTACGCGTATATTAAATTTGGTAGTTAGAGACGGTGTGAAATTATTTGAAAATAGTTGTGATAAAATTGATAATGCTTGTTTTTATATTTTTTATATGAATAGTAGTGGTAGAATTAATCAATTTAAAGAACTTTGTAATGCATTTAAACTTCCGTTTAGAAAAGTTCTGAAGCATGTAAAAACTAGATGGAATTCCTTTTATGATATGCTTGAAGTTGCTTATGCATATAAGTAACCTATTACTACGCTATTTAATAATCATAATGCTTATCCTGAATCAAAACTTAATAATAGTGACTGGGATGAAGTAAATGAACTTAGAATATTTTTGAAATCATTTTATGATGTTAATAAAAAATTTCTAGAATAATTATCCTACTATTTCTGAAATTTTAATACACATATGTGAAATTTTATCTATCTTTTCTGAATATAAAACATATACTTTATTTACCTCTGCTATTGAAGTTATGATTACAAAATTTAAGAAATACTTTTTTCCTATCCCTCAAATTTATTTAACTGCAATTCTTTTCAACCCCGAATATAAAGAATATGGTGCAAAAGCTTTAATTGAATGCATTTATCAGAATTTAGATATTCAACCTGAAGAAGAACCTGATTTGGTAACATGTTAAAATAATATAAATTTTTTTGCTAAAGAAATGTATGATAAATATTCTTCCTTAGATAATGTTGAAACTCCTCAAA</gDNA_template>
            <first_frame> *  L  F  N  C  Y  C  A  L  D  W  L  *  L  K  F  T  K  K  N  Y  W  L  *  N  L  S  K  E  K  N  E  M  Y  I  A  I  T  V  L  K  I  L  D  F  F  G  L  S  D  K  V  I  S  I  T  L  D  N  A  F  A  N  L  N  A  I  N  M  L  E  P  R  L  C  P  I  S  K  Y  V  F  H  V  R  C  A  T  R  I  L  N  L  V  V  R  D  G  V  K  L  F  E  N  S  C  D  K  I  D  N  A  C  F  Y  I  F  Y  M  N  S  S  G  R  I  N  Q  F  K  E  L  C  N  A  F  K  L  P  F  R  K  V  L  K  H  V  K  T  R  W  N  S  F  Y  D  M  L  E  V  A  Y  A  Y  K  *  P  I  T  T  L  F  N  N  H  N  A  Y  P  E  S  K  L  N  N  S  D  W  D  E  V  N  E  L  R  I  F  L  K  S  F  Y  D  V  N  K  K  F  L  E  *  L  S  Y  Y  F  *  N  F  N  T  H  M  *  N  F  I  Y  L  F  *  I  *  N  I  Y  F  I  Y  L  C  Y  *  S  Y  D  Y  K  I  *  E  I  L  F  S  Y  P  S  N  L  F  N  C  N  S  F  Q  P  R  I  *  R  I  W  C  K  S  F  N  *  M  H  L  S  E  F  R  Y  S  T  *  R  R  T  *  F  G  N  M  L  K  *  Y  K  F  F  C  *  R  N  V  *  *  I  F  F  L  R  *  C  *  N  S  S   </first_frame>
            <second_frame>  D  Y  L  T  V  I  A  H  W  I  G  Y  N  *  N  L  Q  K  K  I  I  G  Y  K  I  C  Q  K  K  K  M  K  C  I  L  L  L  P  C  *  K  F  *  I  F  L  V  F  P  I  K  S  L  V  L  L  *  I  M  L  L  L  I  *  M  L  L  I  C  *  N  L  D  F  V  R  L  V  N  M  F  F  M  L  D  V  L  R  V  Y  *  I  W  *  L  E  T  V  *  N  Y  L  K  I  V  V  I  K  L  I  M  L  V  F  I  F  F  I  *  I  V  V  V  E  L  I  N  L  K  N  F  V  M  H  L  N  F  R  L  E  K  F  *  S  M  *  K  L  D  G  I  P  F  M  I  C  L  K  L  L  M  H  I  S  N  L  L  L  R  Y  L  I  I  I  M  L  I  L  N  Q  N  L  I  I  V  T  G  M  K  *  M  N  L  E  Y  F  *  N  H  F  M  M  L  I  K  N  F  *  N  N  Y  P  T  I  S  E  I  L  I  H  I  C  E  I  L  S  I  F  S  E  Y  K  T  Y  T  L  F  T  S  A  I  E  V  M  I  T  K  F  K  K  Y  F  F  P  I  P  Q  I  Y  L  T  A  I  L  F  N  P  E  Y  K  E  Y  G  A  K  A  L  I  E  C  I  Y  Q  N  L  D  I  Q  P  E  E  E  P  D  L  V  T  C  *  N  N  I  N  F  F  A  K  E  M  Y  D  K  Y  S  S  L  D  N  V  E  T  P  Q  </second_frame>
            <third_frame>   I  I  *  L  L  L  R  I  G  L  V  I  I  E  I  Y  K  K  K  L  L  V  I  K  F  V  K  R  K  K  *  N  V  Y  C  Y  Y  R  V  E  N  F  R  F  F  W  S  F  R  *  S  H  *  Y  Y  F  R  *  C  F  C  *  F  K  C  Y  *  Y  V  R  T  *  T  L  S  D  *  *  I  C  F  S  C  *  M  C  Y  A  Y  I  K  F  G  S  *  R  R  C  E  I  I  *  K  *  L  *  *  N  *  *  C  L  F  L  Y  F  L  Y  E  *  *  W  *  N  *  S  I  *  R  T  L  *  C  I  *  T  S  V  *  K  S  S  E  A  C  K  N  *  M  E  F  L  L  *  Y  A  *  S  C  L  C  I  *  V  T  Y  Y  Y  A  I  *  *  S  *  C  L  S  *  I  K  T  *  *  *  *  L  G  *  S  K  *  T  *  N  I  F  E  I  I  L  *  C  *  *  K  I  S  R  I  I  I  L  L  F  L  K  F  *  Y  T  Y  V  K  F  Y  L  S  F  L  N  I  K  H  I  L  Y  L  P  L  L  L  K  L  *  L  Q  N  L  R  N  T  F  F  L  S  L  K  F  I  *  L  Q  F  F  S  T  P  N  I  K  N  M  V  Q  K  L  *  L  N  A  F  I  R  I  *  I  F  N  L  K  K  N  L  I  W  *  H  V  K  I  I  *  I  F  L  L  K  K  C  M  I  N  I  L  P  *  I  M  L  K  L  L  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002M15.1" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="108554" stop="108976"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>420</number_coding_nucleotides>
                  <number_encoded_amino_acids>140</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NLSKEKNEMYIAITVLKILDFFGLSDKVISITLDNAFANLNAINMLEPRLCPISKYVFHVRCATRILNLVVRDGVKLFENSCDKIDNACFYIFYMNSSGRINQFKELCNAFKLPFRKVLKHVKTRWNSFYDMLEVAYAYK*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002M15.1" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="109107" stop="109379"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>270</number_coding_nucleotides>
                  <number_encoded_amino_acids>90</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NNYPTISEILIHICEILSIFSEYKTYTLFTSAIEVMITKFKKYFFPIPQIYLTAILFNPEYKEYGAKALIECIYQNLDIQPEEEPDLVTC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="-" PGL_start="110069" PGL_stop="109409"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="110069" e_stop="109409"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.922"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.922">
            <gDNA_exon_boundary e_start="110069" e_stop="109409" e_length="661"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110069" stop="109657"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443600" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="109984" stop="109409"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E426698" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATTTCAATTTACAACTATTAGTAGAGTACATAGTTTACGCAGCCACCTTCTAGGAAGGGTTCTATTTCAACTAAGTCTCGAATGTAATACTAATAGTTGTATAGTTCCGTAAAATCCTCTTTCTAACTCAGCTATAGATTGATTGTAATCAACTTCTGGTCTTGGTAAAGCTCGTTGACGATCTTGAAGTTCGATGCCATCATCACTACCATATCTAATAGCGGAATTTATGAAAAGTTCAAATTGACTATCTAACTTTGGAAGTCCTTGATTTCTCCGCTCAACATTTATCTAATCTCTAAATAACACTGATATCTCCAATCTGTCTACTGCTAACGAATATCTGTAGTCTCCAATTTGAAATCTTGCCGCGCTGAAAGCTGCCTCCGAAGCTACTGATGATCCTTGAATTGCAAGCACATCTTTTACCATCCTACTAAGTTTTGGAAATTGAGTTCCACGAGTCCTTCACCAGTTCAATAGTTGTGGTATACCTTCATCGTTTGTAATATCATCGAATACTGTTCAAGATACTTAACAAATTCACATTTATTAGAAGAGTCAAGACCAAGTTTATGTTTCATTCCTCCATGAGCACCTACTTGAGGCATAGACGTTTGAGGAGTTTCAACATTATCTAAGGAAGAATATTTATCATAC</gDNA_template>
            <first_frame> N  F  N  L  Q  L  L  V  E  Y  I  V  Y  A  A  T  F  *  E  G  F  Y  F  N  *  V  S  N  V  I  L  I  V  V  *  F  R  K  I  L  F  L  T  Q  L  *  I  D  C  N  Q  L  L  V  L  V  K  L  V  D  D  L  E  V  R  C  H  H  H  Y  H  I  *  *  R  N  L  *  K  V  Q  I  D  Y  L  T  L  E  V  L  D  F  S  A  Q  H  L  S  N  L  *  I  T  L  I  S  P  I  C  L  L  L  T  N  I  C  S  L  Q  F  E  I  L  P  R  *  K  L  P  P  K  L  L  M  I  L  E  L  Q  A  H  L  L  P  S  Y  *  V  L  E  I  E  F  H  E  S  F  T  S  S  I  V  V  V  Y  L  H  R  L  *  Y  H  R  I  L  F  K  I  L  N  K  F  T  F  I  R  R  V  K  T  K  F  M  F  H  S  S  M  S  T  Y  L  R  H  R  R  L  R  S  F  N  I  I  *  G  R  I  F  I  I  </first_frame>
            <second_frame>  I  S  I  Y  N  Y  *  *  S  T  *  F  T  Q  P  P  S  R  K  G  S  I  S  T  K  S  R  M  *  Y  *  *  L  Y  S  S  V  K  S  S  F  *  L  S  Y  R  L  I  V  I  N  F  W  S  W  *  S  S  L  T  I  L  K  F  D  A  I  I  T  T  I  S  N  S  G  I  Y  E  K  F  K  L  T  I  *  L  W  K  S  L  I  S  P  L  N  I  Y  L  I  S  K  *  H  *  Y  L  Q  S  V  Y  C  *  R  I  S  V  V  S  N  L  K  S  C  R  A  E  S  C  L  R  S  Y  *  *  S  L  N  C  K  H  I  F  Y  H  P  T  K  F  W  K  L  S  S  T  S  P  S  P  V  Q  *  L  W  Y  T  F  I  V  C  N  I  I  E  Y  C  S  R  Y  L  T  N  S  H  L  L  E  E  S  R  P  S  L  C  F  I  P  P  *  A  P  T  *  G  I  D  V  *  G  V  S  T  L  S  K  E  E  Y  L  S  Y </second_frame>
            <third_frame>   F  Q  F  T  T  I  S  R  V  H  S  L  R  S  H  L  L  G  R  V  L  F  Q  L  S  L  E  C  N  T  N  S  C  I  V  P  *  N  P  L  S  N  S  A  I  D  *  L  *  S  T  S  G  L  G  K  A  R  *  R  S  *  S  S  M  P  S  S  L  P  Y  L  I  A  E  F  M  K  S  S  N  *  L  S  N  F  G  S  P  *  F  L  R  S  T  F  I  *  S  L  N  N  T  D  I  S  N  L  S  T  A  N  E  Y  L  *  S  P  I  *  N  L  A  A  L  K  A  A  S  E  A  T  D  D  P  *  I  A  S  T  S  F  T  I  L  L  S  F  G  N  *  V  P  R  V  L  H  Q  F  N  S  C  G  I  P  S  S  F  V  I  S  S  N  T  V  Q  D  T  *  Q  I  H  I  Y  *  K  S  Q  D  Q  V  Y  V  S  F  L  H  E  H  L  L  E  A  *  T  F  E  E  F  Q  H  Y  L  R  K  N  I  Y  H   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0002M15.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="-" PGL_start="121152" PGL_stop="115114"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="121152" e_stop="120732"/>
            <exon e_start="119942" e_stop="119835"/>
            <exon e_start="117700" e_stop="117539"/>
            <exon e_start="117437" e_stop="117266"/>
            <exon e_start="115706" e_stop="115633"/>
            <exon e_start="115523" e_stop="115114"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.904" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.673" e_score="1.000"/>
          <exon-intron don_prob="0.833" acc_prob="0.997" e_score="0.988"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="121152" e_stop="120732" e_length="421"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="1.000">
            <gDNA_intron_boundary i_start="120731" i_stop="119943" i_length="789"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="119942" e_stop="119835" e_length="108"/>
          </exon>
          <intron i_serial="2" don_prob="0.984" acc_prob="0.904">
            <gDNA_intron_boundary i_start="119834" i_stop="117701" i_length="2134"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="117700" e_stop="117539" e_length="162"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.673">
            <gDNA_intron_boundary i_start="117538" i_stop="117438" i_length="101"/>
          </intron>
          <exon e_serial="4" e_score="0.988">
            <gDNA_exon_boundary e_start="117437" e_stop="117266" e_length="172"/>
          </exon>
          <intron i_serial="4" don_prob="0.833" acc_prob="0.997">
            <gDNA_intron_boundary i_start="117265" i_stop="115707" i_length="1559"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="115706" e_stop="115633" e_length="74"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="115632" i_stop="115524" i_length="109"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="115523" e_stop="115114" e_length="410"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121152" stop="120732"/>
              <exon start="119942" stop="119835"/>
              <exon start="117700" stop="117539"/>
              <exon start="117437" stop="117431"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346346" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121148" stop="120811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338296" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121139" stop="120732"/>
              <exon start="119942" stop="119835"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298188" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121126" stop="120732"/>
              <exon start="119942" stop="119835"/>
              <exon start="117700" stop="117548"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E328073" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121126" stop="120732"/>
              <exon start="119942" stop="119835"/>
              <exon start="117700" stop="117597"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E376530" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121126" stop="120732"/>
              <exon start="119942" stop="119835"/>
              <exon start="117700" stop="117657"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E330655" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121126" stop="120732"/>
              <exon start="119942" stop="119924"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210556" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121122" stop="120732"/>
              <exon start="119942" stop="119835"/>
              <exon start="117700" stop="117539"/>
              <exon start="117437" stop="117266"/>
              <exon start="115706" stop="115633"/>
              <exon start="115523" stop="115492"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703563" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121115" stop="120818"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309970" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121066" stop="120732"/>
              <exon start="119942" stop="119835"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121059" stop="120732"/>
              <exon start="119942" stop="119835"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233609" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121059" stop="120753"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298837" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121033" stop="120732"/>
              <exon start="119942" stop="119835"/>
              <exon start="117700" stop="117539"/>
              <exon start="117437" stop="117303"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E604391" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115680" stop="115633"/>
              <exon start="115523" stop="115244"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353766" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115456" stop="115114"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349180" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115456" stop="115114"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353668" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCGTATCTCTACGTGGAGCCTTTTCCTGATATTCATACTACACTCTCTCTATTGAAGCTCCAAAATAGTTGCGAACAAATCGTTGACAATGTATCGATCGGCGGCAAAGAGGTTACTACCGGCGTTTTACCGGCGACGCCAGGATGCAGTATCATGCATTCGAACCCTAGCAGCAGACTACCCCACTCGATTCATGACTTCAGCTGCCACCGGAAATATTCCTGATCAGAACCCTATTCCGGTTAACCCTATTCTTCCTAGCTCTAATCCGACCGACTCTACCGCATCATCATCTTGGAAGGAAGAAGAAAGGACACGTTTTCAGGATACTGATGCAAAATCTAGCTCGAGAACAAAGCGGCCTAAAGCGCATTACAAGGACGAAGAGGCCCTTGTACTCAGTGCCTCTCTTTCTCATGTG : ATTCGGCTAGGATGGACTGAAACCGCCATGATTGCAGGTGCAAGGGATGTCGGAGTGTCACCTTCCATTGTTGGATCATTTCCTCGGAAAGAAGCTGCACTAGTGGAG : TATTTTATGGACGAGTGTCTGGAAAGACTCATTGATATCATTGAATCAAGGAACGATCTGAATAACTTAATACCTAGTGAGCGGATAGCAAAGCTTGTACGAATTCGCTTGGAAATGCAAACCCCTTACATATCAAAATGGCCACAAGCTCTCAGTATACAG : GCTCAACCCTTGAATGTTCCAACAAGCTTCAAGCAGCGTGCAATGCTGGTTGATGAGATATGGCATGCTGTTGGTGATGATGCCAACGAAATTGATTGGTATGTGAAGCGCACTGTTCTAGGTGGAATATACTCCACGACAGAACTATACATGTTGACAGATAGCTCTCCAG : ATTTTCGTGATACATGGGCATTCTTGGATGCACGAACAAAAGATGCATTTGATCTGAAGAAGACTGCTCAAGAG : GCACAACGTTTGGCTGAAGCAGTTGGTGCAGGAATGGGAGGCTCTGTACAAGGTTTTATGAAGAGGGTCTTCACAGGCTGAATATAGTTTGCAGTGACTAATATGATCTTATAGGTGTGGTGGTTCACAAAATAAAAATTATAATTTGTGTCTATCGGCAGAAATGCTAATTTAGATTAGCAGTAATCGATGGGCATGCTGTTGCCATTTTGGCGTTAGAAATGCTTGTACATGAGAATATCTTTTGTTGGCAAAATATGCTTGTATCTTTCTCCGATTCATCTTTCTTTCCCTTTTTCTTTTTTCCTCTGGATAGTCAAGAAAACCCCATATGCACTTATTGGGAATGAAAAATTCCTTCTTTATCTGATAGAAAATCAAGAGAAGTTGTGAATTCATCTATTTGTTGT</gDNA_template>
            <first_frame> P  Y  L  Y  V  E  P  F  P  D  I  H  T  T  L  S  L  L  K  L  Q  N  S  C  E  Q  I  V  D  N  V  S  I  G  G  K  E  V  T  T  G  V  L  P  A  T  P  G  C  S  I  M  H  S  N  P  S  S  R  L  P  H  S  I  H  D  F  S  C  H  R  K  Y  S  *  S  E  P  Y  S  G  *  P  Y  S  S  *  L  *  S  D  R  L  Y  R  I  I  I  L  E  G  R  R  K  D  T  F  S  G  Y  *  C  K  I  *  L  E  N  K  A  A  *  S  A  L  Q  G  R  R  G  P  C  T  Q  C  L  S  F  S  C   : D  S  A  R  M  D  *  N  R  H  D  C  R  C  K  G  C  R  S  V  T  F  H  C  W  I  I  S  S  E  R  S  C  T  S  G   : V  F  Y  G  R  V  S  G  K  T  H  *  Y  H  *  I  K  E  R  S  E  *  L  N  T  *  *  A  D  S  K  A  C  T  N  S  L  G  N  A  N  P  L  H  I  K  M  A  T  S  S  Q  Y  T   : G  S  T  L  E  C  S  N  K  L  Q  A  A  C  N  A  G  *  *  D  M  A  C  C  W  *  *  C  Q  R  N  *  L  V  C  E  A  H  C  S  R  W  N  I  L  H  D  R  T  I  H  V  D  R  *  L  S  R :   F  S  *  Y  M  G  I  L  G  C  T  N  K  R  C  I  *  S  E  E  D  C  S  R   : G  T  T  F  G  *  S  S  W  C  R  N  G  R  L  C  T  R  F  Y  E  E  G  L  H  R  L  N  I  V  C  S  D  *  Y  D  L  I  G  V  V  V  H  K  I  K  I  I  I  C  V  Y  R  Q  K  C  *  F  R  L  A  V  I  D  G  H  A  V  A  I  L  A  L  E  M  L  V  H  E  N  I  F  C  W  Q  N  M  L  V  S  F  S  D  S  S  F  F  P  F  F  F  F  P  L  D  S  Q  E  N  P  I  C  T  Y  W  E  *  K  I  P  S  L  S  D  R  K  S  R  E  V  V  N  S  S  I  C  C </first_frame>
            <second_frame>  R  I  S  T  W  S  L  F  L  I  F  I  L  H  S  L  Y  *  S  S  K  I  V  A  N  K  S  L  T  M  Y  R  S  A  A  K  R  L  L  P  A  F  Y  R  R  R  Q  D  A  V  S  C  I  R  T  L  A  A  D  Y  P  T  R  F  M  T  S  A  A  T  G  N  I  P  D  Q  N  P  I  P  V  N  P  I  L  P  S  S  N  P  T  D  S  T  A  S  S  S  W  K  E  E  E  R  T  R  F  Q  D  T  D  A  K  S  S  S  R  T  K  R  P  K  A  H  Y  K  D  E  E  A  L  V  L  S  A  S  L  S  H  V  :  I  R  L  G  W  T  E  T  A  M  I  A  G  A  R  D  V  G  V  S  P  S  I  V  G  S  F  P  R  K  E  A  A  L  V  E  :  Y  F  M  D  E  C  L  E  R  L  I  D  I  I  E  S  R  N  D  L  N  N  L  I  P  S  E  R  I  A  K  L  V  R  I  R  L  E  M  Q  T  P  Y  I  S  K  W  P  Q  A  L  S  I  Q  :  A  Q  P  L  N  V  P  T  S  F  K  Q  R  A  M  L  V  D  E  I  W  H  A  V  G  D  D  A  N  E  I  D  W  Y  V  K  R  T  V  L  G  G  I  Y  S  T  T  E  L  Y  M  L  T  D  S  S  P   : D  F  R  D  T  W  A  F  L  D  A  R  T  K  D  A  F  D  L  K  K  T  A  Q  E  :  A  Q  R  L  A  E  A  V  G  A  G  M  G  G  S  V  Q  G  F  M  K  R  V  F  T  G  *  I  *  F  A  V  T  N  M  I  L  *  V  W  W  F  T  K  *  K  L  *  F  V  S  I  G  R  N  A  N  L  D  *  Q  *  S  M  G  M  L  L  P  F  W  R  *  K  C  L  Y  M  R  I  S  F  V  G  K  I  C  L  Y  L  S  P  I  H  L  S  F  P  F  S  F  F  L  W  I  V  K  K  T  P  Y  A  L  I  G  N  E  K  F  L  L  Y  L  I  E  N  Q  E  K  L  *  I  H  L  F  V   </second_frame>
            <third_frame>   V  S  L  R  G  A  F  S  *  Y  S  Y  Y  T  L  S  I  E  A  P  K  *  L  R  T  N  R  *  Q  C  I  D  R  R  Q  R  G  Y  Y  R  R  F  T  G  D  A  R  M  Q  Y  H  A  F  E  P  *  Q  Q  T  T  P  L  D  S  *  L  Q  L  P  P  E  I  F  L  I  R  T  L  F  R  L  T  L  F  F  L  A  L  I  R  P  T  L  P  H  H  H  L  G  R  K  K  K  G  H  V  F  R  I  L  M  Q  N  L  A  R  E  Q  S  G  L  K  R  I  T  R  T  K  R  P  L  Y  S  V  P  L  F  L  M  * :   F  G  *  D  G  L  K  P  P  *  L  Q  V  Q  G  M  S  E  C  H  L  P  L  L  D  H  F  L  G  K  K  L  H  *  W  S :   I  L  W  T  S  V  W  K  D  S  L  I  S  L  N  Q  G  T  I  *  I  T  *  Y  L  V  S  G  *  Q  S  L  Y  E  F  A  W  K  C  K  P  L  T  Y  Q  N  G  H  K  L  S  V  Y  R :   L  N  P  *  M  F  Q  Q  A  S  S  S  V  Q  C  W  L  M  R  Y  G  M  L  L  V  M  M  P  T  K  L  I  G  M  *  S  A  L  F  *  V  E  Y  T  P  R  Q  N  Y  T  C  *  Q  I  A  L  Q  :  I  F  V  I  H  G  H  S  W  M  H  E  Q  K  M  H  L  I  *  R  R  L  L  K  R :   H  N  V  W  L  K  Q  L  V  Q  E  W  E  A  L  Y  K  V  L  *  R  G  S  S  Q  A  E  Y  S  L  Q  *  L  I  *  S  Y  R  C  G  G  S  Q  N  K  N  Y  N  L  C  L  S  A  E  M  L  I  *  I  S  S  N  R  W  A  C  C  C  H  F  G  V  R  N  A  C  T  *  E  Y  L  L  L  A  K  Y  A  C  I  F  L  R  F  I  F  L  S  L  F  L  F  S  S  G  *  S  R  K  P  H  M  H  L  L  G  M  K  N  S  F  F  I  *  *  K  I  K  R  S  C  E  F  I  Y  L  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002M15.1" strand="-"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="121097" stop="120732"/>
                    <exon start="119942" stop="119835"/>
                    <exon start="117700" stop="117539"/>
                    <exon start="117437" stop="117266"/>
                    <exon start="115706" stop="115633"/>
                    <exon start="115523" stop="115443"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>960</number_coding_nucleotides>
                  <number_encoded_amino_acids>320</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SSKIVANKSLTMYRSAAKRLLPAFYRRRQDAVSCIRTLAADYPTRFMTSAATGNIPDQNPIPVNPILPSSNPTDSTASSSWKEEERTRFQDTDAKSSSRTKRPKAHYKDEEALVLSASLSHVIRLGWTETAMIAGARDVGVSPSIVGSFPRKEAALVEYFMDECLERLIDIIESRNDLNNLIPSERIAKLVRIRLEMQTPYISKWPQALSIQAQPLNVPTSFKQRAMLVDEIWHAVGDDANEIDWYVKRTVLGGIYSTTELYMLTDSSPDFRDTWAFLDARTKDAFDLKKTAQEAQRLAEAVGAGMGGSVQGFMKRVFTG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="121148" e_stop="120732"/>
            <exon e_start="119905" e_stop="119835"/>
            <exon e_start="117700" e_stop="117539"/>
            <exon e_start="117437" e_stop="117266"/>
            <exon e_start="115706" e_stop="115633"/>
            <exon e_start="115523" e_stop="115114"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="0.105" e_score="0.997"/>
          <exon-intron don_prob="0.984" acc_prob="0.904" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.673" e_score="0.969"/>
          <exon-intron don_prob="0.833" acc_prob="0.997" e_score="0.994"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="121148" e_stop="120732" e_length="417"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="0.105">
            <gDNA_intron_boundary i_start="120731" i_stop="119906" i_length="826"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="119905" e_stop="119835" e_length="71"/>
          </exon>
          <intron i_serial="2" don_prob="0.984" acc_prob="0.904">
            <gDNA_intron_boundary i_start="119834" i_stop="117701" i_length="2134"/>
          </intron>
          <exon e_serial="3" e_score="0.969">
            <gDNA_exon_boundary e_start="117700" e_stop="117539" e_length="162"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.673">
            <gDNA_intron_boundary i_start="117538" i_stop="117438" i_length="101"/>
          </intron>
          <exon e_serial="4" e_score="0.994">
            <gDNA_exon_boundary e_start="117437" e_stop="117266" e_length="172"/>
          </exon>
          <intron i_serial="4" don_prob="0.833" acc_prob="0.997">
            <gDNA_intron_boundary i_start="117265" i_stop="115707" i_length="1559"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="115706" e_stop="115633" e_length="74"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="115632" i_stop="115524" i_length="109"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="115523" e_stop="115114" e_length="410"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121148" stop="120811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338296" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121115" stop="120818"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309970" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121059" stop="120753"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298837" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121043" stop="120732"/>
              <exon start="119905" stop="119835"/>
              <exon start="117700" stop="117539"/>
              <exon start="117437" stop="117291"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E422961" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121043" stop="120732"/>
              <exon start="119905" stop="119835"/>
              <exon start="117700" stop="117612"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E449434" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120963" stop="120732"/>
              <exon start="119905" stop="119835"/>
              <exon start="117700" stop="117539"/>
              <exon start="117437" stop="117266"/>
              <exon start="115706" stop="115633"/>
              <exon start="115523" stop="115266"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E422962" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115680" stop="115633"/>
              <exon start="115523" stop="115244"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353766" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115456" stop="115114"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349180" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115456" stop="115114"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353668" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATCTCTACGTGGAGCCTTTTCCTGATATTCATACTACACTCTCTCTATTGAAGCTCCAAAATAGTTGCGAACAAATCGTTGACAATGTATCGATCGGCGGCAAAGAGGTTACTACCGGCGTTTTACCGGCGACGCCAGGATGCAGTATCATGCATTCGAACCCTAGCAGCAGACTACCCCACTCGATTCATGACTTCAGCTGCCACCGGAAATATTCCTGATCAGAACCCTATTCCGGTTAACCCTATTCTTCCTAGCTCTAATCCGACCGACTCTACCGCATCATCATCTTGGAAGGAAGAAGAAAGGACACGTTTTCAGGATACTGATGCAAAATCTAGCTCGAGAACAAAGCGGCCTAAAGCGCATTACAAGGACGAAGAGGCCCTTGTACTCAGTGCCTCTCTTTCTCATGTG : GTGCAAGGGATGTCGGAGTGTCACCTTCCATTGTTGGATCATTTCCTCGGAAAGAAGCTGCACTAGTGGAG : TATTTTATGGACGAGTGTCTGGAAAGACTCATTGATATCATTGAATCAAGGAACGATCTGAATAACTTAATACCTAGTGAGCGGATAGCAAAGCTTGTACGAATTCGCTTGGAAATGCAAACCCCTTACATATCAAAATGGCCACAAGCTCTCAGTATACAG : GCTCAACCCTTGAATGTTCCAACAAGCTTCAAGCAGCGTGCAATGCTGGTTGATGAGATATGGCATGCTGTTGGTGATGATGCCAACGAAATTGATTGGTATGTGAAGCGCACTGTTCTAGGTGGAATATACTCCACGACAGAACTATACATGTTGACAGATAGCTCTCCAG : ATTTTCGTGATACATGGGCATTCTTGGATGCACGAACAAAAGATGCATTTGATCTGAAGAAGACTGCTCAAGAG : GCACAACGTTTGGCTGAAGCAGTTGGTGCAGGAATGGGAGGCTCTGTACAAGGTTTTATGAAGAGGGTCTTCACAGGCTGAATATAGTTTGCAGTGACTAATATGATCTTATAGGTGTGGTGGTTCACAAAATAAAAATTATAATTTGTGTCTATCGGCAGAAATGCTAATTTAGATTAGCAGTAATCGATGGGCATGCTGTTGCCATTTTGGCGTTAGAAATGCTTGTACATGAGAATATCTTTTGTTGGCAAAATATGCTTGTATCTTTCTCCGATTCATCTTTCTTTCCCTTTTTCTTTTTTCCTCTGGATAGTCAAGAAAACCCCATATGCACTTATTGGGAATGAAAAATTCCTTCTTTATCTGATAGAAAATCAAGAGAAGTTGTGAATTCATCTATTTGTTGT</gDNA_template>
            <first_frame> I  S  T  W  S  L  F  L  I  F  I  L  H  S  L  Y  *  S  S  K  I  V  A  N  K  S  L  T  M  Y  R  S  A  A  K  R  L  L  P  A  F  Y  R  R  R  Q  D  A  V  S  C  I  R  T  L  A  A  D  Y  P  T  R  F  M  T  S  A  A  T  G  N  I  P  D  Q  N  P  I  P  V  N  P  I  L  P  S  S  N  P  T  D  S  T  A  S  S  S  W  K  E  E  E  R  T  R  F  Q  D  T  D  A  K  S  S  S  R  T  K  R  P  K  A  H  Y  K  D  E  E  A  L  V  L  S  A  S  L  S  H  V  :  V  Q  G  M  S  E  C  H  L  P  L  L  D  H  F  L  G  K  K  L  H  *  W  S :   I  L  W  T  S  V  W  K  D  S  L  I  S  L  N  Q  G  T  I  *  I  T  *  Y  L  V  S  G  *  Q  S  L  Y  E  F  A  W  K  C  K  P  L  T  Y  Q  N  G  H  K  L  S  V  Y  R :   L  N  P  *  M  F  Q  Q  A  S  S  S  V  Q  C  W  L  M  R  Y  G  M  L  L  V  M  M  P  T  K  L  I  G  M  *  S  A  L  F  *  V  E  Y  T  P  R  Q  N  Y  T  C  *  Q  I  A  L  Q  :  I  F  V  I  H  G  H  S  W  M  H  E  Q  K  M  H  L  I  *  R  R  L  L  K  R :   H  N  V  W  L  K  Q  L  V  Q  E  W  E  A  L  Y  K  V  L  *  R  G  S  S  Q  A  E  Y  S  L  Q  *  L  I  *  S  Y  R  C  G  G  S  Q  N  K  N  Y  N  L  C  L  S  A  E  M  L  I  *  I  S  S  N  R  W  A  C  C  C  H  F  G  V  R  N  A  C  T  *  E  Y  L  L  L  A  K  Y  A  C  I  F  L  R  F  I  F  L  S  L  F  L  F  S  S  G  *  S  R  K  P  H  M  H  L  L  G  M  K  N  S  F  F  I  *  *  K  I  K  R  S  C  E  F  I  Y  L  L  </first_frame>
            <second_frame>  S  L  R  G  A  F  S  *  Y  S  Y  Y  T  L  S  I  E  A  P  K  *  L  R  T  N  R  *  Q  C  I  D  R  R  Q  R  G  Y  Y  R  R  F  T  G  D  A  R  M  Q  Y  H  A  F  E  P  *  Q  Q  T  T  P  L  D  S  *  L  Q  L  P  P  E  I  F  L  I  R  T  L  F  R  L  T  L  F  F  L  A  L  I  R  P  T  L  P  H  H  H  L  G  R  K  K  K  G  H  V  F  R  I  L  M  Q  N  L  A  R  E  Q  S  G  L  K  R  I  T  R  T  K  R  P  L  Y  S  V  P  L  F  L  M  W :   C  K  G  C  R  S  V  T  F  H  C  W  I  I  S  S  E  R  S  C  T  S  G   : V  F  Y  G  R  V  S  G  K  T  H  *  Y  H  *  I  K  E  R  S  E  *  L  N  T  *  *  A  D  S  K  A  C  T  N  S  L  G  N  A  N  P  L  H  I  K  M  A  T  S  S  Q  Y  T   : G  S  T  L  E  C  S  N  K  L  Q  A  A  C  N  A  G  *  *  D  M  A  C  C  W  *  *  C  Q  R  N  *  L  V  C  E  A  H  C  S  R  W  N  I  L  H  D  R  T  I  H  V  D  R  *  L  S  R :   F  S  *  Y  M  G  I  L  G  C  T  N  K  R  C  I  *  S  E  E  D  C  S  R   : G  T  T  F  G  *  S  S  W  C  R  N  G  R  L  C  T  R  F  Y  E  E  G  L  H  R  L  N  I  V  C  S  D  *  Y  D  L  I  G  V  V  V  H  K  I  K  I  I  I  C  V  Y  R  Q  K  C  *  F  R  L  A  V  I  D  G  H  A  V  A  I  L  A  L  E  M  L  V  H  E  N  I  F  C  W  Q  N  M  L  V  S  F  S  D  S  S  F  F  P  F  F  F  F  P  L  D  S  Q  E  N  P  I  C  T  Y  W  E  *  K  I  P  S  L  S  D  R  K  S  R  E  V  V  N  S  S  I  C  C </second_frame>
            <third_frame>   L  Y  V  E  P  F  P  D  I  H  T  T  L  S  L  L  K  L  Q  N  S  C  E  Q  I  V  D  N  V  S  I  G  G  K  E  V  T  T  G  V  L  P  A  T  P  G  C  S  I  M  H  S  N  P  S  S  R  L  P  H  S  I  H  D  F  S  C  H  R  K  Y  S  *  S  E  P  Y  S  G  *  P  Y  S  S  *  L  *  S  D  R  L  Y  R  I  I  I  L  E  G  R  R  K  D  T  F  S  G  Y  *  C  K  I  *  L  E  N  K  A  A  *  S  A  L  Q  G  R  R  G  P  C  T  Q  C  L  S  F  S  C   : G  A  R  D  V  G  V  S  P  S  I  V  G  S  F  P  R  K  E  A  A  L  V  E  :  Y  F  M  D  E  C  L  E  R  L  I  D  I  I  E  S  R  N  D  L  N  N  L  I  P  S  E  R  I  A  K  L  V  R  I  R  L  E  M  Q  T  P  Y  I  S  K  W  P  Q  A  L  S  I  Q  :  A  Q  P  L  N  V  P  T  S  F  K  Q  R  A  M  L  V  D  E  I  W  H  A  V  G  D  D  A  N  E  I  D  W  Y  V  K  R  T  V  L  G  G  I  Y  S  T  T  E  L  Y  M  L  T  D  S  S  P   : D  F  R  D  T  W  A  F  L  D  A  R  T  K  D  A  F  D  L  K  K  T  A  Q  E  :  A  Q  R  L  A  E  A  V  G  A  G  M  G  G  S  V  Q  G  F  M  K  R  V  F  T  G  *  I  *  F  A  V  T  N  M  I  L  *  V  W  W  F  T  K  *  K  L  *  F  V  S  I  G  R  N  A  N  L  D  *  Q  *  S  M  G  M  L  L  P  F  W  R  *  K  C  L  Y  M  R  I  S  F  V  G  K  I  C  L  Y  L  S  P  I  H  L  S  F  P  F  S  F  F  L  W  I  V  K  K  T  P  Y  A  L  I  G  N  E  K  F  L  L  Y  L  I  E  N  Q  E  K  L  *  I  H  L  F  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002M15.1" strand="-"/>
                <serials PGL_serial="19" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="120786" stop="120732"/>
                    <exon start="119905" stop="119835"/>
                    <exon start="117700" stop="117539"/>
                    <exon start="117437" stop="117266"/>
                    <exon start="115706" stop="115633"/>
                    <exon start="115523" stop="115443"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>612</number_coding_nucleotides>
                  <number_encoded_amino_acids>204</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SALQGRRGPCTQCLSFSCGARDVGVSPSIVGSFPRKEAALVEYFMDECLERLIDIIESRNDLNNLIPSERIAKLVRIRLEMQTPYISKWPQALSIQAQPLNVPTSFKQRAMLVDEIWHAVGDDANEIDWYVKRTVLGGIYSTTELYMLTDSSPDFRDTWAFLDARTKDAFDLKKTAQEAQRLAEAVGAGMGGSVQGFMKRVFTG*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0002M15.1" strand="-"/>
                <serials PGL_serial="19" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="121146" stop="120928"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LYVEPFPDIHTTLSLLKLQNSCEQIVDNVSIGGKEVTTGVLPATPGCSIMHSNPSSRLPHSIHDFSCHRKYS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 273 chains have been computed
$ 
$ memory statistics:
$ 139272 bytes spliced alignments in total
$ 65 spliced alignments have been stored
$ 2142 bytes was the average size of a spliced alignment
$ 28384 bytes predicted gene locations in total
$ 19 predicted gene locations have been stored
$ 1493 bytes was the average size of a predicted gene location
$ 2 megabytes was the average size of the backtrace matrix
$ 357 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-15 15:35:53
-->
