<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-14 20:50:39"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E537494" ref_strand="+" ref_description="SGN-E537494 [TUS-56-B24]">
      <seq>gaaaagacaaggtcaatccaatccaaaaagcagaagtgagatgttcaactctcatccagaagaagttgcctctggttttccaattgaccctcctagaccatctcaagtcgtcgaagaagcaagtaatgatccccacgtgcagcttcataagcgaggttcccattccgggccattgtctcaccgagctgcttgggcaaaagctggaaagaatatggatgatgccccaaagctttctgtagcggacatgtcagctatgtctgggctagtcgctgcaaggagaagcatgttctctgaagaccgtccagataagtcaggttcacacaaacaggaggttcctaaactcatagccaggtttcccggatcctataaagaggcttcacattccacaatgaaacaagaacagaaaaatcatgcacttgctagctcacatcatcaaaacgaggacggtagaaccagcaacaacgatcccgttcttttgggatatggatcaaaaggcaacaaaatccactactctggaccactactagttccatcaggcaaaatggatcaagtgttgaaagatcacgatcgccacatccaagaagctgtaagacgagcacgcttggacaaggcgaaagcaaagaaaattcaggttgaaggcaacaaattatcagccaattcattatttgtttctggccgttgagcttcaactgagagcgaatcggctaagaaacactaaaagagaatccagactatagaaaaatcactagttagttagtattatcatgtaaaatgagtcaaatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="2711" stop="4182"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3011" g_stop="3485" g_length="475"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="475" r_length="475" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3486" i_stop="3572" i_length="87">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="3573" g_stop="3882" g_length="310"/>
          <reference_exon_boundary r_type="cDNA" r_start="476" r_stop="785" r_length="310" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E537494" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>785</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E537494" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3011" e_stop="3485"/>
          <exon e_start="3573" e_stop="3882"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAGACAAGGTCAATCCAATCCAAAAAGCAGAAGTGAGATGTTCAACTCTCATCCAGAAGAAGTTGCCTCTGGTTTTCCAATTGACCCTCCTAGACCATCTCAAGTCGTCGAAGAAGCAAGTAATGATCCCCACGTGCAGCTTCATAAGCGAGGTTCCCATTCCGGGCCATTGTCTCACCGAGCTGCTTGGGCAAAAGCTGGAAAGAATATGGATGATGCCCCAAAGCTTTCTGTAGCGGACATGTCAGCTATGTCTGGGCTAGTCGCTGCAAGGAGAAGCATGTTCTCTGAAGACCGTCCAGATAAGTCAGGTTCACACAAACAGGAGGTTCCTAAACTCATAGCCAGGTTTCCCGGATCCTATAAAGAGGCTTCACATTCCACAATGAAACAAGAACAGAAAAATCATGCACTTGCTAGCTCACATCATCAAAACGAGGACGGTAGAACCAGCAACAACGATCCCGTTCTTGTAAGAAGCCTATCCACATATTCTGTCTATACATCTGCAAAACTACCATGATCTGATTTACTTACTCACAATCTTTTTTCATGTCAGTTGGGATATGGATCAAAAGGCAACAAAATCCACTACTCTGGACCACTACTAGTTCCATCAGGCAAAATGGATCAAGTGTTGAAAGATCACGATCGCCACATCCAAGAAGCTGTAAGACGAGCACGCTTGGACAAGGCGAAAGCAAAGAAAATTCAGGTTGAAGGCAACAAATTATCAGCCAATTCATTATTTGTTTCTGGCCGTTGAGCTTCAACTGAGAGCGAATCGGCTAAGAACAACTAAAAGAGAATCCAGACTATAGAAAAATCACTAGTTAGTTAGTATTATCATGTAAAATGAGTCAAATTTG</genome_strand>
        <mrna_strand>GAAAAGACAAGGTCAATCCAATCCAAAAAGCAGAAGTGAGATGTTCAACTCTCATCCAGAAGAAGTTGCCTCTGGTTTTCCAATTGACCCTCCTAGACCATCTCAAGTCGTCGAAGAAGCAAGTAATGATCCCCACGTGCAGCTTCATAAGCGAGGTTCCCATTCCGGGCCATTGTCTCACCGAGCTGCTTGGGCAAAAGCTGGAAAGAATATGGATGATGCCCCAAAGCTTTCTGTAGCGGACATGTCAGCTATGTCTGGGCTAGTCGCTGCAAGGAGAAGCATGTTCTCTGAAGACCGTCCAGATAAGTCAGGTTCACACAAACAGGAGGTTCCTAAACTCATAGCCAGGTTTCCCGGATCCTATAAAGAGGCTTCACATTCCACAATGAAACAAGAACAGAAAAATCATGCACTTGCTAGCTCACATCATCAAAACGAGGACGGTAGAACCAGCAACAACGATCCCGTTCTT.......................................................................................TTGGGATATGGATCAAAAGGCAACAAAATCCACTACTCTGGACCACTACTAGTTCCATCAGGCAAAATGGATCAAGTGTTGAAAGATCACGATCGCCACATCCAAGAAGCTGTAAGACGAGCACGCTTGGACAAGGCGAAAGCAAAGAAAATTCAGGTTGAAGGCAACAAATTATCAGCCAATTCATTATTTGTTTCTGGCCGTTGAGCTTCAACTGAGAGCGAATCGGCTAAGAAACACTAAAAGAGAATCCAGACTATAGAAAAATCACTAGTTAGTTAGTATTATCATGTAAAATGAGTCAAATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E266314" ref_strand="+" ref_description="SGN-E266314 [cLEI-3-L18]">
      <seq>aaaagacaaggtcaatccaatccaaaaagcagaagtgagatgttcaactctcatccagaagaagttgcctctggttttccaattgaccctcctagaccatctcaagtcgtcgaagaagcaagtaatgatccccacgtgcagcttcataagcgaggttcccattccgggccattgtctcaccgagctgcttgggcaaaagctggaaagaatatggatgatgccccaaagctttctgtagcggacatgtcagctatgtctgggctagtcgctgcaaggagaagcatgttctctgaagaccgtccagataagtcaggttcacacaaacaggaggttcctaaactcatagccaggtttcccggatcctataaagaggcttcacattccacaatgaaacaagaacagaaaaatcatgcacttgctagctcacatcatcaaaacgaggacggtagaaccagcaacaacgatcccgttcttttgggatatggatcaaaaggcaacaaaatccactactctggaccactactagttccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="2712" stop="3930"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3012" g_stop="3485" g_length="474"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="474" r_length="474" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3486" i_stop="3572" i_length="87">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="3573" g_stop="3630" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="475" r_stop="532" r_length="58" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E266314" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>532</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E266314" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3012" e_stop="3485"/>
          <exon e_start="3573" e_stop="3630"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGACAAGGTCAATCCAATCCAAAAAGCAGAAGTGAGATGTTCAACTCTCATCCAGAAGAAGTTGCCTCTGGTTTTCCAATTGACCCTCCTAGACCATCTCAAGTCGTCGAAGAAGCAAGTAATGATCCCCACGTGCAGCTTCATAAGCGAGGTTCCCATTCCGGGCCATTGTCTCACCGAGCTGCTTGGGCAAAAGCTGGAAAGAATATGGATGATGCCCCAAAGCTTTCTGTAGCGGACATGTCAGCTATGTCTGGGCTAGTCGCTGCAAGGAGAAGCATGTTCTCTGAAGACCGTCCAGATAAGTCAGGTTCACACAAACAGGAGGTTCCTAAACTCATAGCCAGGTTTCCCGGATCCTATAAAGAGGCTTCACATTCCACAATGAAACAAGAACAGAAAAATCATGCACTTGCTAGCTCACATCATCAAAACGAGGACGGTAGAACCAGCAACAACGATCCCGTTCTTGTAAGAAGCCTATCCACATATTCTGTCTATACATCTGCAAAACTACCATGATCTGATTTACTTACTCACAATCTTTTTTCATGTCAGTTGGGATATGGATCAAAAGGCAACAAAATCCACTACTCTGGACCACTACTAGTTCCAT</genome_strand>
        <mrna_strand>AAAAGACAAGGTCAATCCAATCCAAAAAGCAGAAGTGAGATGTTCAACTCTCATCCAGAAGAAGTTGCCTCTGGTTTTCCAATTGACCCTCCTAGACCATCTCAAGTCGTCGAAGAAGCAAGTAATGATCCCCACGTGCAGCTTCATAAGCGAGGTTCCCATTCCGGGCCATTGTCTCACCGAGCTGCTTGGGCAAAAGCTGGAAAGAATATGGATGATGCCCCAAAGCTTTCTGTAGCGGACATGTCAGCTATGTCTGGGCTAGTCGCTGCAAGGAGAAGCATGTTCTCTGAAGACCGTCCAGATAAGTCAGGTTCACACAAACAGGAGGTTCCTAAACTCATAGCCAGGTTTCCCGGATCCTATAAAGAGGCTTCACATTCCACAATGAAACAAGAACAGAAAAATCATGCACTTGCTAGCTCACATCATCAAAACGAGGACGGTAGAACCAGCAACAACGATCCCGTTCTT.......................................................................................TTGGGATATGGATCAAAAGGCAACAAAATCCACTACTCTGGACCACTACTAGTTCCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E351817" ref_strand="+" ref_description="SGN-E351817 [cTOS-8-K13]">
      <seq>tctgaagaccgtccagataagtcaggttcacacaaacaggaggttcctaaactcatagccaggtttcccggatcctataaagaggcttcacattccacaatgaaacaagaacagaaaaatcatgcacttgctagctcacatcatcaaaacgaggacggtagaaccagcaacaacgatcccgttcttttgggatatggatcaaaaggcaacaaaatccactactctggaccactactagttccatcaggcaaaatggatcaagtgttgaaagatcacgatcgccacatccaagaagctgtaagacgagcacgcttggacaaggcgaaagcaaagaaaattcaggttgaaggcaacaaattatcagccaattcattatttgtttctggccgttgagcttcaactgagagcgaatcggctaagaacaactaaaagagaatccagactatagaaaaatcactagttagttagtattatcatgtaaaatgagtcaaatttgagaagggtgagttgagggagtttgtatagaagttgtttaaggaaagatagcgcggggcgtttttttcgccatttgtagaagaattatctggnaaagatctcccttgntttctgctatttaaaccatgtaactctctctaaacattgatcattcttgctgttcaggtaactgtcttcagtctctgtgcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="3000" stop="4382"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3300" g_stop="3485" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="186" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3486" i_stop="3572" i_length="87">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="3573" g_stop="4082" g_length="510"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="693" r_length="507" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E351817" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>696</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E351817" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3300" e_stop="3485"/>
          <exon e_start="3573" e_stop="4082"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGAAGACCGTCCAGATAAGTCAGGTTCACACAAACAGGAGGTTCCTAAACTCATAGCCAGGTTTCCCGGATCCTATAAAGAGGCTTCACATTCCACAATGAAACAAGAACAGAAAAATCATGCACTTGCTAGCTCACATCATCAAAACGAGGACGGTAGAACCAGCAACAACGATCCCGTTCTTGTAAGAAGCCTATCCACATATTCTGTCTATACATCTGCAAAACTACCATGATCTGATTTACTTACTCACAATCTTTTTTCATGTCAGTTGGGATATGGATCAAAAGGCAACAAAATCCACTACTCTGGACCACTACTAGTTCCATCAGGCAAAATGGATCAAGTGTTGAAAGATCACGATCGCCACATCCAAGAAGCTGTAAGACGAGCACGCTTGGACAAGGCGAAAGCAAAGAAAATTCAGGTTGAAGGCAACAAATTATCAGCCAATTCATTATTTGTTTCTGGCCGTTGAGCTTCAACTGAGAGCGAATCGGCTAAGAACAACTAAAAGAGAATCCAGACTATAGAAAAATCACTAGTTAGTTAGTATTATCATGTAAAATGAGTCAAATTTGAGAAGGGTGAGTTGAGGGAGTTTGTATAGAAGTTGTTTAAGGAAGGATAGCGCGGGGCGTTTTTTTCGCCATTTGTAGAAGAATTTATCTGGAAAAGATCTCCCTTGTTTTCTGCTAATTTAAACAATGTAACTCTCTCTAAACATTGAATCATTCTTGCTGTTCAGGTAACTGTCTTCAGTCTCTGTGCAAGAATGATA</genome_strand>
        <mrna_strand>TCTGAAGACCGTCCAGATAAGTCAGGTTCACACAAACAGGAGGTTCCTAAACTCATAGCCAGGTTTCCCGGATCCTATAAAGAGGCTTCACATTCCACAATGAAACAAGAACAGAAAAATCATGCACTTGCTAGCTCACATCATCAAAACGAGGACGGTAGAACCAGCAACAACGATCCCGTTCTT.......................................................................................TTGGGATATGGATCAAAAGGCAACAAAATCCACTACTCTGGACCACTACTAGTTCCATCAGGCAAAATGGATCAAGTGTTGAAAGATCACGATCGCCACATCCAAGAAGCTGTAAGACGAGCACGCTTGGACAAGGCGAAAGCAAAGAAAATTCAGGTTGAAGGCAACAAATTATCAGCCAATTCATTATTTGTTTCTGGCCGTTGAGCTTCAACTGAGAGCGAATCGGCTAAGAACAACTAAAAGAGAATCCAGACTATAGAAAAATCACTAGTTAGTTAGTATTATCATGTAAAATGAGTCAAATTTGAGAAGGGTGAGTTGAGGGAGTTTGTATAGAAGTTGTTTAAGGAAAGATAGCGCGGGGCGTTTTTTTCGCCATTTGTAGAAGAA-TTATCTGGNAAAGATCTCCCTTGNTTTCTGCT-ATTTAAACCATGTAACTCTCTCTAAACATTG-ATCATTCTTGCTGTTCAGGTAACTGTCTTCAGTCTCTGTGCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E226422" ref_strand="+" ref_description="SGN-E226422 [cLEL-26-L19](-)">
      <seq>ccgttcttttgggatatggatcaaaaggcaacaaaatccactactctggaccactactagttccatcaggcaaaatggatcaagtgttgaaagatcacgatcgccacatccaagaagctgtaagacgagcacgcttggacaaggcgaaagcaaagaaaattcaggttgaaggcaacaaattatcagccaattcattatttgtttctggccgttgagcttcaactgagagcgaatcggctaagtncnnctaaaagagaatccagactatagaaaaatcactagttagttagtattatcatgtaaaatgagtcaaatttgagaagggtgagttgagggagtttgtatagaagttgtttaaggaaggatagcgcggggcgtttttttcgccatttgtagaagaatttatctggaaaagatctcccttgttttctgctaatttaaacaatgtaactctctctaaacattgaatcattcttgctgttcaggtaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="3265" stop="34753"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3478" g_stop="3485" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="8" r_length="8" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3486" i_stop="3572" i_length="87">
            <donor d_prob="0.991" d_score="0.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="3573" g_stop="4049" g_length="477"/>
          <reference_exon_boundary r_type="cDNA" r_start="9" r_stop="485" r_length="477" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="4050" i_stop="4451" i_length="402">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.672" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="4452" g_stop="4470" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="486" r_stop="504" r_length="19" r_score="0.474"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E226422" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>504</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E226422" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3478" e_stop="3485"/>
          <exon e_start="3573" e_stop="4049"/>
          <exon e_start="4452" e_stop="4470"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGTTCTTGTAAGAAGCCTATCCACATATTCTGTCTATACATCTGCAAAACTACCATGATCTGATTTACTTACTCACAATCTTTTTTCATGTCAGTTGGGATATGGATCAAAAGGCAACAAAATCCACTACTCTGGACCACTACTAGTTCCATCAGGCAAAATGGATCAAGTGTTGAAAGATCACGATCGCCACATCCAAGAAGCTGTAAGACGAGCACGCTTGGACAAGGCGAAAGCAAAGAAAATTCAGGTTGAAGGCAACAAATTATCAGCCAATTCATTATTTGTTTCTGGCCGTTGAGCTTCAACTGAGAGCGAATCGGCTAAGAACAACTAAAAGAGAATCCAGACTATAGAAAAATCACTAGTTAGTTAGTATTATCATGTAAAATGAGTCAAATTTGAGAAGGGTGAGTTGAGGGAGTTTGTATAGAAGTTGTTTAAGGAAGGATAGCGCGGGGCGTTTTTTTCGCCATTTGTAGAAGAATTTATCTGGAAAAGATCTCCCTTGTTTTCTGCTAATTTAAACAATGTAACTCTCTCTAAACATTGAATCATTCTTGCTGTTCAGGTAACTGTCTTCAGTCTCTGTGCAAGAATGATATGTTCAACAAATCTAAGTAACTTCAAATAATCTACTATGTCCAAACATGTCATAAGTATTAAAACTTAAAAAGGACATCATTATGGGAAATGGTTAGTTCAAAAAAAGCAACAATCTCGATACAGAGTTGTATTTGTTAGGGAGCGTTATAGATTTCACAGCGTGAATCTAAATTTAGTCAGGGTGGAAAAACAAAAAGGATTATTCCCCAACATCTTTTTATAGTATCAAGATGCCAAACATTTTCAGCTTATCAAATATGCTACATAATGAGAGGTGGTATCTACACATATCTTCTATTTACAAAAGAACAAAACTAGTTTGATGTGTAATATGGAGAAGCTTATCCAAATTAAAAACATGTTATAGTTACAAAACTTTTGATATA</genome_strand>
        <mrna_strand>CCGTTCTT.......................................................................................TTGGGATATGGATCAAAAGGCAACAAAATCCACTACTCTGGACCACTACTAGTTCCATCAGGCAAAATGGATCAAGTGTTGAAAGATCACGATCGCCACATCCAAGAAGCTGTAAGACGAGCACGCTTGGACAAGGCGAAAGCAAAGAAAATTCAGGTTGAAGGCAACAAATTATCAGCCAATTCATTATTTGTTTCTGGCCGTTGAGCTTCAACTGAGAGCGAATCGGCTAAGTNCNNCTAAAAGAGAATCCAGACTATAGAAAAATCACTAGTTAGTTAGTATTATCATGTAAAATGAGTCAAATTTGAGAAGGGTGAGTTGAGGGAGTTTGTATAGAAGTTGTTTAAGGAAGGATAGCGCGGGGCGTTTTTTTCGCCATTTGTAGAAGAATTTATCTGGAAAAGATCTCCCTTGTTTTCTGCTAATTTAAACAATGTAACTCTCTCTAAACATTGAATCATTCTTGCTGTTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E226582" ref_strand="+" ref_description="SGN-E226582 [cLEL-26-L19](-)">
      <seq>agttccatcaggcaaaatggatcaagtggttgaaaggatcacgatcgccacatccaagaagctgtaagacgagcacgcttggacaaggcgaaagcaaagaaaattcaggttgaaggcaacaaattatcagccaattcattatttgtttctggccgttgagcttcaactgagagcgaatcggctaagaacaactaaaagagaatccagactatagaaaaatcactagttagttagtattatcatgtaaaatgagtcaaatttgagaagggtgagttgagggagtttgtatagaagttgtttaaggaaggaaagcgcggggcgtttttttcgccatttgtagaagaatttatctggaaaagatctcccttgttttctgctaatttaaacaatgtaactctctctaaacattgaatcattcttgctgttcaggataaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="3323" stop="34755"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3623" g_stop="4049" g_length="427"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="429" r_length="429" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4050" i_stop="4264" i_length="215">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4265" g_stop="4284" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="430" r_stop="449" r_length="20" r_score="0.650"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E226582" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>447</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E226582" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3623" e_stop="4049"/>
          <exon e_start="4265" e_stop="4284"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTCCATCAGGCAAAATGGATCAAGT-GTTGAAA-GATCACGATCGCCACATCCAAGAAGCTGTAAGACGAGCACGCTTGGACAAGGCGAAAGCAAAGAAAATTCAGGTTGAAGGCAACAAATTATCAGCCAATTCATTATTTGTTTCTGGCCGTTGAGCTTCAACTGAGAGCGAATCGGCTAAGAACAACTAAAAGAGAATCCAGACTATAGAAAAATCACTAGTTAGTTAGTATTATCATGTAAAATGAGTCAAATTTGAGAAGGGTGAGTTGAGGGAGTTTGTATAGAAGTTGTTTAAGGAAGGATAGCGCGGGGCGTTTTTTTCGCCATTTGTAGAAGAATTTATCTGGAAAAGATCTCCCTTGTTTTCTGCTAATTTAAACAATGTAACTCTCTCTAAACATTGAATCATTCTTGCTGTTCAGGTAACTGTCTTCAGTCTCTGTGCAAGAATGATATGTTCAACAAATCTAAGTAACTTCAAATAATCTACTATGTCCAAACATGTCATAAGTATTAAAACTTAAAAAGGACATCATTATGGGAAATGGTTAGTTCAAAAAAAGCAACAATCTCGATACAGAGTTGTATTTGTTAGGGAGCGTTATAGATTTCACAGCGTGAATCTAAATTTAGTCAGGGTGGAAAAACAAAAAGGAT</genome_strand>
        <mrna_strand>AGTTCCATCAGGCAAAATGGATCAAGTGGTTGAAAGGATCACGATCGCCACATCCAAGAAGCTGTAAGACGAGCACGCTTGGACAAGGCGAAAGCAAAGAAAATTCAGGTTGAAGGCAACAAATTATCAGCCAATTCATTATTTGTTTCTGGCCGTTGAGCTTCAACTGAGAGCGAATCGGCTAAGAACAACTAAAAGAGAATCCAGACTATAGAAAAATCACTAGTTAGTTAGTATTATCATGTAAAATGAGTCAAATTTGAGAAGGGTGAGTTGAGGGAGTTTGTATAGAAGTTGTTTAAGGAAGGAAAGCGCGGGGCGTTTTTTTCGCCATTTGTAGAAGAATTTATCTGGAAAAGATCTCCCTTGTTTTCTGCTAATTTAAACAATGTAACTCTCTCTAAACATTGAATCATTCTTGCTGTTCAG.......................................................................................................................................................................................................................GATAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E736485" ref_strand="+" ref_description="SGN-E736485 [LC05DH01]">
      <seq>tgattctttttgagtgagtttgtctctcttaaggaagaccttagattgcttttttttgcttgtttgtactgtttttcttggtaaataggttgataacttgaataaaatgaagttgagagacttctgaaatgatgggtttggccttccttttactgaaaatgtgttcttgattcgatatggctatggtgaaagtgaaaggatgtgctaggattctaagaatttcccagctggctaatgttgtggcccttgggctacatacaagttatacgtagataacaatggagggttcatctgaatctggttgggagggatcagatagttataggggtttgaattcttcagctcttgtggacaggaatcctagatttcaaacgagcagcattaggtcctccaatgatgtgttgcatgattctgggtttgttccaggcagaaaggggagggagataattgagttccctcctgcaaatcatcttaaagcccaaggtgggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="6329" stop="7417"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6629" g_stop="7117" g_length="489"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="489" r_length="489" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E736485" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E736485" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6629" e_stop="7117"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATTCTTTTTGAGTGAGTTTGTCTCTCTTAAGGAAGACCTTAGATTGCTTTTTTTTGCTTGTTTGTACTGTTTTTCTTGGTAAATAGGTTGATAACTTGAATAAAATGAAGTTGAGAGACTTCTGAAATGATGGGTTTGGCCTTCCTTTTACTGAAAATGTGTTCTTGATTCGATATGGCTATGGTGAAAGTGAAAGGATGTGCTAGGATTCTAAGAATTTCCCAGCTGGTTAATGTTGTGGCCCTTGGGCTACATACAAGTTATACGTAGATAACAATGGAGGGTTCATCTGAATCTGGTTGGGAGGGATCAGATAGTTATAGGGGTTTGAATTCTTCAGCTCTTGTGGACAGGAATCCTAGATTTCAAACGAGCAGCATTAGGTCCTCCAATGATGTGTTGCATGATTCTGGGTTTGTTCCAGGTAGAAAGGGGAGGGAGATAATTGAGTTCCCTCCTGCAAATCATCTTAAAGCCCAAGGTGGGG</genome_strand>
        <mrna_strand>TGATTCTTTTTGAGTGAGTTTGTCTCTCTTAAGGAAGACCTTAGATTGCTTTTTTTTGCTTGTTTGTACTGTTTTTCTTGGTAAATAGGTTGATAACTTGAATAAAATGAAGTTGAGAGACTTCTGAAATGATGGGTTTGGCCTTCCTTTTACTGAAAATGTGTTCTTGATTCGATATGGCTATGGTGAAAGTGAAAGGATGTGCTAGGATTCTAAGAATTTCCCAGCTGGCTAATGTTGTGGCCCTTGGGCTACATACAAGTTATACGTAGATAACAATGGAGGGTTCATCTGAATCTGGTTGGGAGGGATCAGATAGTTATAGGGGTTTGAATTCTTCAGCTCTTGTGGACAGGAATCCTAGATTTCAAACGAGCAGCATTAGGTCCTCCAATGATGTGTTGCATGATTCTGGGTTTGTTCCAGGCAGAAAGGGGAGGGAGATAATTGAGTTCCCTCCTGCAAATCATCTTAAAGCCCAAGGTGGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E739690" ref_strand="+" ref_description="SGN-E739690 [LC18BH10]">
      <seq>cattgatcagatagttataggggtttgaattcttcagctcttgtggacaggaatcctagatttcaaacgagcagcattaggtcctccaatgatgtgttgcatgattctgggtttgttccaggtagaaaggggagggagataattgagttccctcctgcaaatcatcttaaagcccaaggtggggttgcagaggataggctcactgtggatcgaggttgtcgcggaacagactttagtggtgttagtttgaggcagtggctggacaacccagagagagctgttgatgctcttgaatgtctgcacatattcacccaaattgtggagattgtaaacctggcacattcacagggaatagttgttcataatgcacgaccatcatgttttgtcatgtcctctttcaaacgtattgcattcatcgaatccgtatcctgctcggattcaggttcagattcatcagatgatggtttaaacagccaaactgtcgagttaaaggattcatcttcagttttgcctcataaatcggaagggctggggattcatagttctcagcttgagaagatttctgtaaaagcttcaatcggattatctgaaaactgttgcttacagtcaagctcaggccatatggttcagactttagaagctagtatgaacagacttgaagaaaaacagcacaccttcccaatgaaacaaatgttgctcatggaaaccaattggtacactagtccagaagaaattgctggtgctccaagctcttgtgcttcagacgtttaccgacttggagtccttctcttcgagctattctgcactttcagctcatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="6638" stop="8037"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6934" g_stop="7728" g_length="795"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="795" r_length="795" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7729" i_stop="7835" i_length="107">
            <donor d_prob="0.891" d_score="1.00"/>
            <acceptor a_prob="0.776" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7836" g_stop="7859" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="796" r_stop="819" r_length="24" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E739690" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>819</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E739690" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6934" e_stop="7728"/>
          <exon e_start="7836" e_stop="7859"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGGATCAGATAGTTATAGGGGTTTGAATTCTTCAGCTCTTGTGGACAGGAATCCTAGATTTCAAACGAGCAGCATTAGGTCCTCCAATGATGTGTTGCATGATTCTGGGTTTGTTCCAGGTAGAAAGGGGAGGGAGATAATTGAGTTCCCTCCTGCAAATCATCTTAAAGCCCAAGGTGGGGTTGCAGAGGATAGGCTCACTGTGGATCGAGGTTGTCGCGGAACAGACTTTAGTGGTGTTAGTTTGAGGCAGTGGCTGGACAACCCAGAGAGAGCTGTTGATGCTCTTGAATGTCTGCACATATTCACCCAAATTGTGGAGATTGTAAACCTGGCACATTCACAGGGAATAGTTGTTCATAATGCACGACCATCATGTTTTGTCATGTCCTCTTTCAAACGTATTGCATTCATCGAATCCGTATCCTGCTCGGATTCAGGTTCAGATTCATCAGATGATGGTTTAAACAGCCAAACTGTCGAGTTAAAGGATTCATCTTCAGTTTTGCCTCATAAATCGGAAGGGCTGGGGATTCATAGTTCTCAGCTTGAGAAGATTTCTGTAAAAGCTTCAATCGGATTATCTGAAAACTGTTGCTTACAGTCAAGCTCAGGCCATATGGTTCAGACTTTAGAAGCTAGTATGAACAGACTTGAAGAAAAACAGCACACCTTCCCAATGAAACAAATGTTGCTCATGGAAACCAATTGGTACACTAGTCCAGAAGAAATTGCTGGTGCTCCAAGCTCTTGTGCTTCAGACGTTTACCGACTTGGAGTCCTTCTCTTCGAGGTTAGTACTTGTTAGCTAGTATGTTGCTAAAGGGCCTGCTGAGTTATATTTCGCACGACTGCAAAGATGAAACTTAATGTTTTAATGATTATTATAATTTTGAGCAGCTATTCTGCACCTTCAGCTCATCA</genome_strand>
        <mrna_strand>CATTGATCAGATAGTTATAGGGGTTTGAATTCTTCAGCTCTTGTGGACAGGAATCCTAGATTTCAAACGAGCAGCATTAGGTCCTCCAATGATGTGTTGCATGATTCTGGGTTTGTTCCAGGTAGAAAGGGGAGGGAGATAATTGAGTTCCCTCCTGCAAATCATCTTAAAGCCCAAGGTGGGGTTGCAGAGGATAGGCTCACTGTGGATCGAGGTTGTCGCGGAACAGACTTTAGTGGTGTTAGTTTGAGGCAGTGGCTGGACAACCCAGAGAGAGCTGTTGATGCTCTTGAATGTCTGCACATATTCACCCAAATTGTGGAGATTGTAAACCTGGCACATTCACAGGGAATAGTTGTTCATAATGCACGACCATCATGTTTTGTCATGTCCTCTTTCAAACGTATTGCATTCATCGAATCCGTATCCTGCTCGGATTCAGGTTCAGATTCATCAGATGATGGTTTAAACAGCCAAACTGTCGAGTTAAAGGATTCATCTTCAGTTTTGCCTCATAAATCGGAAGGGCTGGGGATTCATAGTTCTCAGCTTGAGAAGATTTCTGTAAAAGCTTCAATCGGATTATCTGAAAACTGTTGCTTACAGTCAAGCTCAGGCCATATGGTTCAGACTTTAGAAGCTAGTATGAACAGACTTGAAGAAAAACAGCACACCTTCCCAATGAAACAAATGTTGCTCATGGAAACCAATTGGTACACTAGTCCAGAAGAAATTGCTGGTGCTCCAAGCTCTTGTGCTTCAGACGTTTACCGACTTGGAGTCCTTCTCTTCGAG...........................................................................................................CTATTCTGCACTTTCAGCTCATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E421654" ref_strand="+" ref_description="SGN-E421654 [STM-33-A10]">
      <seq>gagacaccgtgtcctccctcctcagttgctgttgaaatggcctaaagaagcttcattttgcttatggttactgcaccccgagccgagaaataggccaaaaatgggtgacttgctagaaagtgacttccttaatgctccaagagatgagtttgaagaacgtgaagcagcaatacagcttagagaagaaatagaggagcaagagttattgctggaattccttttgctaattcaacagcgaaagcaggaggctttgcacaacttgcgtgagattgtatcttttttatcatctgacatagaagaggtctcaaagatgcagaaaaccttcagagacaaaagggattcaaatcaggagccagtaaaggattcaggttcggggaagataaatattgctgaagatgatgaagctgggtgctttgcatctagaaagagatttaggccaggcctttcaatacacacagctgaggaatacaatggcaatccagatgagtctgagaaacatgtcgaaaacaaagggagcattctagcaaaaaatccccggttgatgaagaacttcaggaaattagaggcagcttacttcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="7589" stop="10589"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7889" g_stop="7993" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="105" r_length="105" r_score="0.962"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7994" i_stop="9815" i_length="1822">
            <donor d_prob="0.664" d_score="0.98"/>
            <acceptor a_prob="0.732" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9816" g_stop="10289" g_length="474"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="579" r_length="474" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E421654" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>579</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E421654" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7889" e_stop="7993"/>
          <exon e_start="9816" e_stop="10289"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGACATCGTGTCCTCCCTCCTCAGTTGTTGTTGAAATGGCCAAAAGAAGCTTCATTTTGCTTATGGTTACTGCACCCCGAGCCGAGCAATAGGCCAAAAATGGGGTGGGTATTCTTTTTATGCATCAACCGGATAATTTTTTTCCTCGCTTTGTTCTCCCTCATGGAAAATGGTTCTTTGATTTGTTTGATACCTGGTTGATTTGTTGTCAGTCTTTTTATACCTACTTCAATCTGTAGCTCAATCCTTAGTTTTCAAAGCTGTTATTGGCATATAATGCTCACTACACTGTCAGAGTTTATAGTATACACGCTCTCTTTCTGGTAGAGAACTCTTATCTGGAGAAGTCACCAGATGTTGAGTTTTGTGCATGGATGAATAAATCTTATCACAGTAAATAAGGAAAATATAGGAAAGCATGCGTGCCTTTCTTTCAACAGCACTAATTCATTTCTTTTTTCTTTCCTCTCTTTGGTTGATGAGATGACCCAAGGTTACATTTTGGGTGTGTAACTTGTTAGAATAGGAGTAGAAACAAGAATAGTATGTAGAATTCTACTTAGAAAAGGATTGTAATGTAGTGTCCTAGTTGGAAAAAGAGTCTAATGTAGTGTCTAAAAGTAGGTCTCAATGTAATATATATAGATACAAAATTCAATATATTCTCCTATATTTCTTACACAACTCATTAGGAGTGGTTGCGGGGCTTGGTTGCCTCGACAGGCAAAACTGTTAGTTAATTGATCATCAGCTATGCTTCCCTCTTTGCATAATGCTATTTCATGTCTCATCCCTGGCGTCTTGAAACGTCTTATCAGCTTATTGTTATGGAAATTTGTCCATATTGTTGCTGTTATCTGCACAATTTGTTTGAACCTTAATTGATCACTGCAAAATGTTTTCCTGCGCTGTGGTAAAAGTAAAAGTAAAAGAATGGGAAAATGGCTCTTAAGACTTAGTGAGAGAGAAATAACTAGAAATGAGCAAAGTTTTCTACTAATTAACATCAAATGGTGGCCGAAGAAGTATTAGGAGAGGTGATTAGACACATGGCACAACTTTAGCTTACCGTGGACATGACCTTTCATAGGAGGGTATGAAGGTGGCAGATAAGGGTAGAAGGTAAGTGATAGTTGAGTGATGTTTTGCTTTTCGACGGGATTAGGCTTGATGGTAGTCTGGAGCACCGTGTTTGTCGTTGTATTAGCCTATTCATGTAATTTCTCGCCTTTTGGTGTCTATTACCATAATGTTTTACTGTGTTTCTGTTACCGCACTTTTGTGATGTTGTTGTTGTTCATTTTCTAAATGCTTTGTACTACTTTCCTTATTAGTTGCCGTGTTTTCTTCACAATTGTTTTTCCTTTTAATAACTTTTTTGATTTGAGTTACAGTTTGTTACATATATGTGCCACACTACTTTGCTTTTGGTTGTTATGTTTCTCCCCAATACCCTTTTTCGTTTTATGACTGCTTTGATTTGCTTGAGCCAAGGGTCTTTCGGAAACAACCTCTCTATCTCGGAGAGGTAGTGGCAAGGATTGCATACCCTCTACCATCCCAGACCCCACTTGGTGGGATTTCACTGGGTATGCTGTTTTTGTTGTGTTACTATTTTGATTTGCTGCACTTGAATTGAGGGTCCTTCAAAAACAACCTCTATGCCTCAACGAGGTAGGGGTAAGGACTACGTACACTCTACCTTGCCAATTACCATAACTCCACTTGTGGGATTTCATTGGCAGGTTGTTGTTGTTGCATTAAATGGTAGTCTTTACCTGTTGACCAGATTCATTTCAAGCGCCAAATATGATTCACTTGAAGAATCTACTGTCGCTAAAATCTTAGTTCATTTTATTTTTAACTGCAATGTCCCTCTCTCCTCTATTCTTGTTATTCTGATTCTACTTCTCACATCGATGACAGTGACTTGCTAGAAAGCGACTTCCTTAATGCTCCAAGAGATGAGTTTGAAGAACGTGAAGCAGCAATAGAACTTAGAGAAGAAATAGAGGAGCAAGAGTTATTGCTGGAATTCCTTTTGCTAATTCAACAACGAAAGCTGGAGGCTTTACACAACTTACGTGAGATTGTATCTTTTTTATCATCTGACATAGAAGAGGTCTCAAAGATGCAGAAGACCCTTAGAGTCGAAAGGGGTTCAAATCAGGAGCCAGTAAGGGATTTAGGTTCAGGAAAGATAAATATTGCTGAAGATGATGATGCTGGGTGCTTTGGATCTAGAAAGAGATTTAAGCCAGGCCTTTCTATACACACAGCTGAGGAATACAATGGCAATCCAGATGAGTCTGAGAAACATGTCGAAAACAAAGGGAGCATTCTGGCAAAAAATTCCCGGTTGATGAAGAACTTCAAGAAATTGGAGGTGGCTTATTTCAT</genome_strand>
        <mrna_strand>GAGACACCGTGTCCTCCCTCCTCAGTTGCTGTTGAAATGGCCTAAAGAAGCTTCATTTTGCTTATGGTTACTGCACCCCGAGCCGAGAAATAGGCCAAAAATGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACTTGCTAGAAAGTGACTTCCTTAATGCTCCAAGAGATGAGTTTGAAGAACGTGAAGCAGCAATACAGCTTAGAGAAGAAATAGAGGAGCAAGAGTTATTGCTGGAATTCCTTTTGCTAATTCAACAGCGAAAGCAGGAGGCTTTGCACAACTTGCGTGAGATTGTATCTTTTTTATCATCTGACATAGAAGAGGTCTCAAAGATGCAGAAAACCTTCAGAGACAAAAGGGATTCAAATCAGGAGCCAGTAAAGGATTCAGGTTCGGGGAAGATAAATATTGCTGAAGATGATGAAGCTGGGTGCTTTGCATCTAGAAAGAGATTTAGGCCAGGCCTTTCAATACACACAGCTGAGGAATACAATGGCAATCCAGATGAGTCTGAGAAACATGTCGAAAACAAAGGGAGCATTCTAGCAAAAAATCCCCGGTTGATGAAGAACTTCAGGAAATTAGAGGCAGCTTACTTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E211594" ref_strand="+" ref_description="SGN-E211594 [cLEC-67-E14]">
      <seq>accccgagccgagcaataggccaaaaatgggtgacttgctagaaagcgacttccttaatgctccaagagatgagtttgaagaacgtgaagcagcaatagaacttagagaagaaatagaggagcaagagttattgctggaattccttttgctaattcaacaacgaaagctggaggctttacacaacttacgtgagattgtatcttttttatcatctgacatagaagaggtctcaaagatgcagaagacccttagagtcgaaaggggttcaaatcaggagccagtaagggatttaggttcaggaaagataaatattgctgaagatgatgatgctgggtgctttggatctagaaagagatttaagccaggcctttctatacacacagctgagggatacnatggcaatccagatgagtctgagaaacatgtcnngaaacaagggagcattctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="7663" stop="10512"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7963" g_stop="7993" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="31" r_length="31" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7994" i_stop="9815" i_length="1822">
            <donor d_prob="0.664" d_score="0.00"/>
            <acceptor a_prob="0.732" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9816" g_stop="10233" g_length="418"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="449" r_length="418" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E211594" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>449</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E211594" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7963" e_stop="7993"/>
          <exon e_start="9816" e_stop="10233"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCCCGAGCCGAGCAATAGGCCAAAAATGGGGTGGGTATTCTTTTTATGCATCAACCGGATAATTTTTTTCCTCGCTTTGTTCTCCCTCATGGAAAATGGTTCTTTGATTTGTTTGATACCTGGTTGATTTGTTGTCAGTCTTTTTATACCTACTTCAATCTGTAGCTCAATCCTTAGTTTTCAAAGCTGTTATTGGCATATAATGCTCACTACACTGTCAGAGTTTATAGTATACACGCTCTCTTTCTGGTAGAGAACTCTTATCTGGAGAAGTCACCAGATGTTGAGTTTTGTGCATGGATGAATAAATCTTATCACAGTAAATAAGGAAAATATAGGAAAGCATGCGTGCCTTTCTTTCAACAGCACTAATTCATTTCTTTTTTCTTTCCTCTCTTTGGTTGATGAGATGACCCAAGGTTACATTTTGGGTGTGTAACTTGTTAGAATAGGAGTAGAAACAAGAATAGTATGTAGAATTCTACTTAGAAAAGGATTGTAATGTAGTGTCCTAGTTGGAAAAAGAGTCTAATGTAGTGTCTAAAAGTAGGTCTCAATGTAATATATATAGATACAAAATTCAATATATTCTCCTATATTTCTTACACAACTCATTAGGAGTGGTTGCGGGGCTTGGTTGCCTCGACAGGCAAAACTGTTAGTTAATTGATCATCAGCTATGCTTCCCTCTTTGCATAATGCTATTTCATGTCTCATCCCTGGCGTCTTGAAACGTCTTATCAGCTTATTGTTATGGAAATTTGTCCATATTGTTGCTGTTATCTGCACAATTTGTTTGAACCTTAATTGATCACTGCAAAATGTTTTCCTGCGCTGTGGTAAAAGTAAAAGTAAAAGAATGGGAAAATGGCTCTTAAGACTTAGTGAGAGAGAAATAACTAGAAATGAGCAAAGTTTTCTACTAATTAACATCAAATGGTGGCCGAAGAAGTATTAGGAGAGGTGATTAGACACATGGCACAACTTTAGCTTACCGTGGACATGACCTTTCATAGGAGGGTATGAAGGTGGCAGATAAGGGTAGAAGGTAAGTGATAGTTGAGTGATGTTTTGCTTTTCGACGGGATTAGGCTTGATGGTAGTCTGGAGCACCGTGTTTGTCGTTGTATTAGCCTATTCATGTAATTTCTCGCCTTTTGGTGTCTATTACCATAATGTTTTACTGTGTTTCTGTTACCGCACTTTTGTGATGTTGTTGTTGTTCATTTTCTAAATGCTTTGTACTACTTTCCTTATTAGTTGCCGTGTTTTCTTCACAATTGTTTTTCCTTTTAATAACTTTTTTGATTTGAGTTACAGTTTGTTACATATATGTGCCACACTACTTTGCTTTTGGTTGTTATGTTTCTCCCCAATACCCTTTTTCGTTTTATGACTGCTTTGATTTGCTTGAGCCAAGGGTCTTTCGGAAACAACCTCTCTATCTCGGAGAGGTAGTGGCAAGGATTGCATACCCTCTACCATCCCAGACCCCACTTGGTGGGATTTCACTGGGTATGCTGTTTTTGTTGTGTTACTATTTTGATTTGCTGCACTTGAATTGAGGGTCCTTCAAAAACAACCTCTATGCCTCAACGAGGTAGGGGTAAGGACTACGTACACTCTACCTTGCCAATTACCATAACTCCACTTGTGGGATTTCATTGGCAGGTTGTTGTTGTTGCATTAAATGGTAGTCTTTACCTGTTGACCAGATTCATTTCAAGCGCCAAATATGATTCACTTGAAGAATCTACTGTCGCTAAAATCTTAGTTCATTTTATTTTTAACTGCAATGTCCCTCTCTCCTCTATTCTTGTTATTCTGATTCTACTTCTCACATCGATGACAGTGACTTGCTAGAAAGCGACTTCCTTAATGCTCCAAGAGATGAGTTTGAAGAACGTGAAGCAGCAATAGAACTTAGAGAAGAAATAGAGGAGCAAGAGTTATTGCTGGAATTCCTTTTGCTAATTCAACAACGAAAGCTGGAGGCTTTACACAACTTACGTGAGATTGTATCTTTTTTATCATCTGACATAGAAGAGGTCTCAAAGATGCAGAAGACCCTTAGAGTCGAAAGGGGTTCAAATCAGGAGCCAGTAAGGGATTTAGGTTCAGGAAAGATAAATATTGCTGAAGATGATGATGCTGGGTGCTTTGGATCTAGAAAGAGATTTAAGCCAGGCCTTTCTATACACACAGCTGAGGAATACAATGGCAATCCAGATGAGTCTGAGAAACATGTCGAAAACAAAGGGAGCATTCTG</genome_strand>
        <mrna_strand>ACCCCGAGCCGAGCAATAGGCCAAAAATGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACTTGCTAGAAAGCGACTTCCTTAATGCTCCAAGAGATGAGTTTGAAGAACGTGAAGCAGCAATAGAACTTAGAGAAGAAATAGAGGAGCAAGAGTTATTGCTGGAATTCCTTTTGCTAATTCAACAACGAAAGCTGGAGGCTTTACACAACTTACGTGAGATTGTATCTTTTTTATCATCTGACATAGAAGAGGTCTCAAAGATGCAGAAGACCCTTAGAGTCGAAAGGGGTTCAAATCAGGAGCCAGTAAGGGATTTAGGTTCAGGAAAGATAAATATTGCTGAAGATGATGATGCTGGGTGCTTTGGATCTAGAAAGAGATTTAAGCCAGGCCTTTCTATACACACAGCTGAGGGATACNATGGCAATCCAGATGAGTCTGAGAAACATGTCNNGAAACAAGGGAGCATTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E331266" ref_strand="+" ref_description="SGN-E331266 [cTOD-6-J13]">
      <seq>ggtagtggcaaggattgcataccctctaccatcccagaccccacttggtgggatttcactggtgacttgctagaaagcgacttccttaatgctccaagagatgagtttgaagaacgtgaagcagcaatagaacttatagaagaaatagaggagcaagagttattgctggaattccttttgctaattcaacaacgaaagctggaggctttacacaacttacgtgagattgtatctttttttatcatctgacatagaagaggtctcaaagatgcagaagacccttagagtcgaaaggggttcaaatcaggagccagtaagggatttaggttcaggaaagataaatattgctgaagatgatgatgctgggtgctttggatctagaaagagatttaagccaggcctttctatacacacagctgaggaatacaatggcaatccagatgagtctgagaaacatgtcgaaaacaaagggagcattctggcaaaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="9117" stop="10542"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9417" g_stop="9478" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9479" i_stop="9815" i_length="337">
            <donor d_prob="0.870" d_score="1.00"/>
            <acceptor a_prob="0.732" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9816" g_stop="10242" g_length="427"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="490" r_length="428" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E331266" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E331266" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9417" e_stop="9478"/>
          <exon e_start="9816" e_stop="10242"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTAGTGGCAAGGATTGCATACCCTCTACCATCCCAGACCCCACTTGGTGGGATTTCACTGGGTATGCTGTTTTTGTTGTGTTACTATTTTGATTTGCTGCACTTGAATTGAGGGTCCTTCAAAAACAACCTCTATGCCTCAACGAGGTAGGGGTAAGGACTACGTACACTCTACCTTGCCAATTACCATAACTCCACTTGTGGGATTTCATTGGCAGGTTGTTGTTGTTGCATTAAATGGTAGTCTTTACCTGTTGACCAGATTCATTTCAAGCGCCAAATATGATTCACTTGAAGAATCTACTGTCGCTAAAATCTTAGTTCATTTTATTTTTAACTGCAATGTCCCTCTCTCCTCTATTCTTGTTATTCTGATTCTACTTCTCACATCGATGACAGTGACTTGCTAGAAAGCGACTTCCTTAATGCTCCAAGAGATGAGTTTGAAGAACGTGAAGCAGCAATAGAACTTAGAGAAGAAATAGAGGAGCAAGAGTTATTGCTGGAATTCCTTTTGCTAATTCAACAACGAAAGCTGGAGGCTTTACACAACTTACGTGAGATTGTATC-TTTTTTATCATCTGACATAGAAGAGGTCTCAAAGATGCAGAAGACCCTTAGAGTCGAAAGGGGTTCAAATCAGGAGCCAGTAAGGGATTTAGGTTCAGGAAAGATAAATATTGCTGAAGATGATGATGCTGGGTGCTTTGGATCTAGAAAGAGATTTAAGCCAGGCCTTTCTATACACACAGCTGAGGAATACAATGGCAATCCAGATGAGTCTGAGAAACATGTCGAAAACAAAGGGAGCATTCTGGCAAAAAAT</genome_strand>
        <mrna_strand>GGTAGTGGCAAGGATTGCATACCCTCTACCATCCCAGACCCCACTTGGTGGGATTTCACTGG.................................................................................................................................................................................................................................................................................................................................................TGACTTGCTAGAAAGCGACTTCCTTAATGCTCCAAGAGATGAGTTTGAAGAACGTGAAGCAGCAATAGAACTTATAGAAGAAATAGAGGAGCAAGAGTTATTGCTGGAATTCCTTTTGCTAATTCAACAACGAAAGCTGGAGGCTTTACACAACTTACGTGAGATTGTATCTTTTTTTATCATCTGACATAGAAGAGGTCTCAAAGATGCAGAAGACCCTTAGAGTCGAAAGGGGTTCAAATCAGGAGCCAGTAAGGGATTTAGGTTCAGGAAAGATAAATATTGCTGAAGATGATGATGCTGGGTGCTTTGGATCTAGAAAGAGATTTAAGCCAGGCCTTTCTATACACACAGCTGAGGAATACAATGGCAATCCAGATGAGTCTGAGAAACATGTCGAAAACAAAGGGAGCATTCTGGCAAAAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E327800" ref_strand="+" ref_description="SGN-E327800 [cTOC-20-N7]">
      <seq>gcgacttccttaatgctccaagagatgagtttgaagaacgtgaagcagcaatagaacttagagaagaaatagaggagcaagagttattgctggaattccttttgctaattcaacaacgaaagctggaggctttacacaacttacgtgagattgtatcttttttatcatctgacatagaagaggtctcaaagatgcagaagacccttagagtcgaaaggggttcaaatcaggagccagtaagggatttaggttcaggaaagataaatattgctgaagatgatgatgctgggtgctttggatctagaaagagatttaagccaggcctttctatacacacagctgaggaatacaatggcaatccagatgagtctgagaaacatgtcgaaaacaaagggagcattctggcaaaaaattcccggttgatgaagaacttcaagaaattggaggtggcttatttcatgacaagacgtagggttatcaaaccgacaggcaaatcactatatagacattctcaggcaagtacggattgtagaactgcagttctggcacctgaaagagttcaatgagtaatttggcatcaaaagaggggtgcaatgaggatagacagagtggatcaatcagttcattcctggagggactgtgcaagtatctatcttatagcaagctggaagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="9530" stop="10802"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9830" g_stop="10502" g_length="673"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="672" r_length="672" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E327800" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>673</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E327800" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9830" e_stop="10502"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGACTTCCTTAATGCTCCAAGAGATGAGTTTGAAGAACGTGAAGCAGCAATAGAACTTAGAGAAGAAATAGAGGAGCAAGAGTTATTGCTGGAATTCCTTTTGCTAATTCAACAACGAAAGCTGGAGGCTTTACACAACTTACGTGAGATTGTATCTTTTTTATCATCTGACATAGAAGAGGTCTCAAAGATGCAGAAGACCCTTAGAGTCGAAAGGGGTTCAAATCAGGAGCCAGTAAGGGATTTAGGTTCAGGAAAGATAAATATTGCTGAAGATGATGATGCTGGGTGCTTTGGATCTAGAAAGAGATTTAAGCCAGGCCTTTCTATACACACAGCTGAGGAATACAATGGCAATCCAGATGAGTCTGAGAAACATGTCGAAAACAAAGGGAGCATTCTGGCAAAAAATTCCCGGTTGATGAAGAACTTCAAGAAATTGGAGGTGGCTTATTTCATGACAAGACGTAGGGTTATCAAACCGACAGGCAAATCACTATATAGACATTCTCAGGCAAGTACGGATTGTAGAACTGCAGTTCTGGCACCTGAAAGAAGTTCAATGAGTAATTTGGCATCAAAAGAGGGGTGCAATGAGGATAGACAGAGTGGATCAATCAGTTCATTCCTGGAGGGACTGTGCAAGTATCTATCTTATAGCAAGCTGGAAGT</genome_strand>
        <mrna_strand>GCGACTTCCTTAATGCTCCAAGAGATGAGTTTGAAGAACGTGAAGCAGCAATAGAACTTAGAGAAGAAATAGAGGAGCAAGAGTTATTGCTGGAATTCCTTTTGCTAATTCAACAACGAAAGCTGGAGGCTTTACACAACTTACGTGAGATTGTATCTTTTTTATCATCTGACATAGAAGAGGTCTCAAAGATGCAGAAGACCCTTAGAGTCGAAAGGGGTTCAAATCAGGAGCCAGTAAGGGATTTAGGTTCAGGAAAGATAAATATTGCTGAAGATGATGATGCTGGGTGCTTTGGATCTAGAAAGAGATTTAAGCCAGGCCTTTCTATACACACAGCTGAGGAATACAATGGCAATCCAGATGAGTCTGAGAAACATGTCGAAAACAAAGGGAGCATTCTGGCAAAAAATTCCCGGTTGATGAAGAACTTCAAGAAATTGGAGGTGGCTTATTTCATGACAAGACGTAGGGTTATCAAACCGACAGGCAAATCACTATATAGACATTCTCAGGCAAGTACGGATTGTAGAACTGCAGTTCTGGCACCTGAAAG-AGTTCAATGAGTAATTTGGCATCAAAAGAGGGGTGCAATGAGGATAGACAGAGTGGATCAATCAGTTCATTCCTGGAGGGACTGTGCAAGTATCTATCTTATAGCAAGCTGGAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E736285" ref_strand="+" ref_description="SGN-E736285 [LC05AD01]">
      <seq>ttaggttcaggaaagataaatattgctgaagatgatgatgctgggtgctttggatctagaaagagatttaagccaggcctttctatacacacagctgaggaatacaatggcaatccagatgagtctgagaaacatgtcgaaaacaaagggagcattctggcaaaaaattcccggttgatgaagaacttcaagaaattggaggtggcttatttcatgacaagacgtagggttatcaaaccgacaggcaaatcactatatagacattctcaggcaagtacggattgtagaactgcagttctggcacctgaaagaagttcaatgagtaatttggcatcaaaagaggggtgcaatgaggatagacagagtggatcaatcagttcattcctggagggactgtgcaagtatctatcttatagcaagctggaagtgaaggctgacttgaagcaaggggatcttctaaattcttccaatcttgtatgtgctctaggctttgatcgtgatggtgaatattttgcaactgctggtgtaaataagaagatcaaagtttttgaatataattcaattgttaatgaggaccgcgatatccactatccagttgttgaaatggctagtagatctaagctaagcagcatatgttggaatggctatatcaaaagccagatcgcgtcaagtaactttgaaggtgtggtgcaggtatgggatgtcacaagaagtcaggttttcatggaaatgagagaacatgaaaggcgtgtctggtctgttgacttttctgcagcagatccaaccatgttggctagcgggagtgatgatggttctgtccaactctggaatatcaatcagggagtaagtgttggaaccatcaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="9775" stop="11440"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10075" g_stop="10767" g_length="693"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="693" r_length="693" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10768" i_stop="10840" i_length="73">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10841" g_stop="10987" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="694" r_stop="840" r_length="147" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="10988" i_stop="11116" i_length="129">
            <donor d_prob="0.982" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11117" g_stop="11140" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="841" r_stop="864" r_length="24" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E736285" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>864</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E736285" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10075" e_stop="10767"/>
          <exon e_start="10841" e_stop="10987"/>
          <exon e_start="11117" e_stop="11140"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGGTTCAGGAAAGATAAATATTGCTGAAGATGATGATGCTGGGTGCTTTGGATCTAGAAAGAGATTTAAGCCAGGCCTTTCTATACACACAGCTGAGGAATACAATGGCAATCCAGATGAGTCTGAGAAACATGTCGAAAACAAAGGGAGCATTCTGGCAAAAAATTCCCGGTTGATGAAGAACTTCAAGAAATTGGAGGTGGCTTATTTCATGACAAGACGTAGGGTTATCAAACCGACAGGCAAATCACTATATAGACATTCTCAGGCAAGTACGGATTGTAGAACTGCAGTTCTGGCACCTGAAAGAAGTTCAATGAGTAATTTGGCATCAAAAGAGGGGTGCAATGAGGATAGACAGAGTGGATCAATCAGTTCATTCCTGGAGGGACTGTGCAAGTATCTATCTTATAGCAAGCTGGAAGTGAAGGCTGACTTGAAGCAAGGGGATCTTCTAAATTCTTCCAATCTTGTATGTGCTCTAGGCTTTGATCGTGATGGTGAATATTTTGCAACTGCTGGTGTAAATAAGAAGATCAAAGTTTTTGAATATAATTCAATTGTTAATGAGGACCGCGATATCCACTATCCAGTTGTTGAAATGGCTAGTAGATCTAAGCTAAGCAGCATATGTTGGAATGGCTATATCAAAAGCCAGATCGCGTCAAGTAACTTTGAAGGTGTGGTGCAGGTGAGCTATATTCATGATCATGATTGTTTCTGTTTAATTTAATTGGGATGAAGTTTTTTGAATTCTTTTCCAGGTATGGGATGTCACAAGAAGTCAGGTTTTCATGGAAATGAGAGAACATGAAAGGCGTGTCTGGTCTGTTGACTTTTCTGCAGCAGATCCAACCATGTTGGCTAGCGGGAGTGATGATGGTTCTGTCAAACTCTGGAATATCAATCAGGCAATTCTATTTCTGCACTTGGTGGATGTCAGCTTTGAAACTAAACGTACTACTGTCATCTAGTATGTTAATGTGTAGATAAAAACTGTGTGTAATAAGTTGTTTTTCTTAACTGGGTTGGTACTGCAGGGAGTAAGTGTTGGAACCATCAAA</genome_strand>
        <mrna_strand>TTAGGTTCAGGAAAGATAAATATTGCTGAAGATGATGATGCTGGGTGCTTTGGATCTAGAAAGAGATTTAAGCCAGGCCTTTCTATACACACAGCTGAGGAATACAATGGCAATCCAGATGAGTCTGAGAAACATGTCGAAAACAAAGGGAGCATTCTGGCAAAAAATTCCCGGTTGATGAAGAACTTCAAGAAATTGGAGGTGGCTTATTTCATGACAAGACGTAGGGTTATCAAACCGACAGGCAAATCACTATATAGACATTCTCAGGCAAGTACGGATTGTAGAACTGCAGTTCTGGCACCTGAAAGAAGTTCAATGAGTAATTTGGCATCAAAAGAGGGGTGCAATGAGGATAGACAGAGTGGATCAATCAGTTCATTCCTGGAGGGACTGTGCAAGTATCTATCTTATAGCAAGCTGGAAGTGAAGGCTGACTTGAAGCAAGGGGATCTTCTAAATTCTTCCAATCTTGTATGTGCTCTAGGCTTTGATCGTGATGGTGAATATTTTGCAACTGCTGGTGTAAATAAGAAGATCAAAGTTTTTGAATATAATTCAATTGTTAATGAGGACCGCGATATCCACTATCCAGTTGTTGAAATGGCTAGTAGATCTAAGCTAAGCAGCATATGTTGGAATGGCTATATCAAAAGCCAGATCGCGTCAAGTAACTTTGAAGGTGTGGTGCAG.........................................................................GTATGGGATGTCACAAGAAGTCAGGTTTTCATGGAAATGAGAGAACATGAAAGGCGTGTCTGGTCTGTTGACTTTTCTGCAGCAGATCCAACCATGTTGGCTAGCGGGAGTGATGATGGTTCTGTCCAACTCTGGAATATCAATCAG.................................................................................................................................GGAGTAAGTGTTGGAACCATCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E616173" ref_strand="+" ref_description="SGN-E616173 [65979]">
      <seq>ttggaatggctatattaaaagccagatcgcttcaagtaactttgaaggtgtggtgcaggtatgggacgtcacaagaagtcaggttttcatggaaatgagagaacatgaaaggcgtgtctggtctgttgacttttctgtagcagatccaaccatgttggctagcgggagtgatgatggttctgtcaaactctggaatatcaatcaggcaattctatttctgcacttggtggatgtcagctttgaaactaaacggagcaagtgttggaaccatcaaaacaaaagccaatgtctgctgcgttcagttcccctttgattctggtcgctcccttgcttttggttcagcagatcacaagatatattactatgatctacgtaactcaaaaatgcctctatgcacattaatcgggcacaacaagactgtgagctatgtcaagttcatagattccacaacgcttgtgtctgcatctacagataacacgttaaagctatgggatttgtcaatttgcacatcccggattgttgataaacctcttcagtcatttactggacacatgaatgtaaagaactttgttggcttatctgtatctgaaggttacattgctactggctcagagacaaatgaggtctttgtgtatcacaaagcttttcctatgcctgcattatcatttaaatttaatagcacagatccactatctggtgatgaagtggatgaccaagcacagtttatctcatctgtttgttggcgtggtcaggcctcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="10410" stop="14393"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10710" g_stop="10767" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="58" r_length="58" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10768" i_stop="10840" i_length="73">
            <donor d_prob="0.992" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10841" g_stop="11033" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="251" r_length="193" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11034" i_stop="11116" i_length="83">
            <donor d_prob="0.662" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11117" g_stop="11428" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="563" r_length="312" r_score="0.981"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11429" i_stop="11740" i_length="312">
            <donor d_prob="0.988" d_score="0.96"/>
            <acceptor a_prob="0.825" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="11741" g_stop="11800" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="564" r_stop="623" r_length="60" r_score="0.967"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="11801" i_stop="13957" i_length="2157">
            <donor d_prob="0.993" d_score="0.96"/>
            <acceptor a_prob="0.997" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="13958" g_stop="14093" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="624" r_stop="759" r_length="136" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E616173" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>759</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E616173" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10710" e_stop="10767"/>
          <exon e_start="10841" e_stop="11033"/>
          <exon e_start="11117" e_stop="11428"/>
          <exon e_start="11741" e_stop="11800"/>
          <exon e_start="13958" e_stop="14093"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGAATGGCTATATCAAAAGCCAGATCGCGTCAAGTAACTTTGAAGGTGTGGTGCAGGTGAGCTATATTCATGATCATGATTGTTTCTGTTTAATTTAATTGGGATGAAGTTTTTTGAATTCTTTTCCAGGTATGGGATGTCACAAGAAGTCAGGTTTTCATGGAAATGAGAGAACATGAAAGGCGTGTCTGGTCTGTTGACTTTTCTGCAGCAGATCCAACCATGTTGGCTAGCGGGAGTGATGATGGTTCTGTCAAACTCTGGAATATCAATCAGGCAATTCTATTTCTGCACTTGGTGGATGTCAGCTTTGAAACTAAACGTACTACTGTCATCTAGTATGTTAATGTGTAGATAAAAACTGTGTGTAATAAGTTGTTTTTCTTAACTGGGTTGGTACTGCAGGGAGTAAGTGTTGGAACCATCAAAACAAAAGCCAATGTCTGCTGCGTTCAGTTCCCCTTTGATTCTGGTCGCTCCCTTGCTTTTGGTTCAGCTGATCACAAGATATATTACTATGATCTACGTAACTCAAAAATGCCTCTATGCACATTAATCGGGCACAACAAGACTGTGAGCTATGTCAAGTTCATAGATTCCACAACGCTTGTGTCTGCATCTACAGATAACACATTAAAACTATGGGATTTGTCAATTTGCACATCCCGGATTCTTGATACACCTCTTCAGTCATTTACTGGACACATGAATGTAAAGGTATTTCTCTTTATCCATGTCACCTGAAGAAGACAGATTTTCATGTCTTCGCTGTACTCTTTGCTTCCTTTTGGCGCTCTTTGCTGCAGTTGAAAAGATGGGCTGTCATACAAATTTAAATTTAAATACATACAATTTGTAAATGCTTAATGAATCTGTAGCCTTTTAACATAGGAGATCATCCCTGAAATAATTTATCAGAAATGAGATTGAACTTCAGTTGTGGTTAAATGTGCTTTACTGTGAATGAGATAGAACATCATTTATGGTTGAATGTCCTTTGCTTCTGATAAAAGTATTCTTGCATTTCAGAACTTTGTTGGCTTATCTGTATCTGAAGGTTACATTGCTACTGGCTCGGAGACGAATGAGGTATCATTTACTACCGGATATATCACTAATATTACTTGCTTACTAATTCGATCGTAGATGAGCCTTTAGCAATGGTTACATTGTGATGAAAAATGTGTGTCCTGTATGCATCGAGGAAAAACTAGTTCCAGATGCTTGTTAAATTAAGCACATATACATCTAGGCGGAAACATGGGGCTGCAATCAATGTTCTATGTTCAAGCTATTTGTCAAAAATATATATTTAAATTCTTGTTGTGTCTGAAGCATTTTGGTTGATGCTGTTTGTAAATAATCAAATGAATGACTCACAAACTCTTATTTTATGTAAAAGCTGTACCATAATCTTGCTCCACCCTCTTCGTCACAGGCCAGGGTGATTGTTGCTGTTCTCTTTGGAGACACTGGGAATGGATAGAAAAGTATCACATAGATCCACATTGTTGCGCCTTCCCTGCTTCAAAAAATTAATTCTAGTATAGATCCTACTTTAAATCTCATGTGTCTGTAGAAACTTCTCCATCCTTCTGGTCCTTAGTAACATCACATAGATGCTTTATCTGATTTCTTCCCCATTCTATCCTGTGACCTCCATATTTATCACCAGCACCTATCCTTCACGTTTAATCCTCCTCAAAGTTATGATTATTAGCCTTAGGGCTAGCATCTCTCCCATAGTCCCATGGATAATTCCGTTACTTTTAGGCGTTTTTGCTTTTTTTCAGAATAAAACATGGTGTGTGTACTACAGTCTCATAGAAATGTAAGCCTCTCATGTGTAGTTCACAAAACTTATTCTCAGTTATCATTCCGTAACATGGGTAAACTAGATCCCTTTAGGTGTGATTTTGATTTCTTCTGTTTCTCCTTTCCTCTTTTTCACATCATTTGTACTGCCCTCGAAAACCAGTAAGGTATCAAGTTTGAAGGACAGTTCTTCACCTTATATTGTAGTTTCTAGTTTGTGTTAAAAAATTCTTCCATTTTTTGTCTTTTCTCATTATGTTCTTAGTTTTTTCTTAAATAAATTGATGAAATAACCCTAGCCTTTCTGGGATGTGCTTTTCGGATGAAAGTTCTGACATGATGTACGAAGGATCTAAACCTTGCCTGAATAGGTCATGTACATGCGGCAAAATCAGGAACTTTGTGTCTAACCCCCCCCCCCCCCCAACCCAAACAGTAGTACAGAAAGAAAAGAAAATCTACTGTTCCATAAGACGAAACATTTTCCCACCTCTAACCCCCCCCCCCCCTAAACAGTAGTACAGAAAGAAAAGAAAATCTAAGGACTTACTGCATTTTATCCTTATAGGGGAGGAATGACTTTCTTCCACTTGACATATACATGCATACATGGGTTTGTATGTGCACGCCCTCATTTCTGTTTGGAAGTTGGGAGAACTTATTGGGAAACAACATCAATCAACCAACTGTGCATCAACACCAAAACTAGTTGGGAGCAGCACTGTTTTCCACAGAAACTATATAAGAAAATGAAGTATTTACGAGAGAGATAATTTGAAGAACTCAGTTTGACAAGCAAAGATATATACAATGAGGATCATTTTCATGTGCTGCCCAATTAGTAACAAGTCTCTGGCCATTGCCCCTGATATTATACATTAAATTTTTTTAAAAAATTAACAACATGGATTGTTAAGCGGCCAGTCTTGATGATTAAGCTTTCTTCTTTTTCTGATAGGACAACATGACACAATTGATACCAAAAGAAAAGAATTTCCTGTAAAAGTTGCTTTTGCGACCTCTTAGACAGTCCTCTTTCTCCATTAACATGTATTTGGTTACTTCTAATTAGCTGATAGTAACAGTTCCCACATTCACTGCTCATATTTGGTAAACATCAAGAATATGAAAACCTGGGAATAAATAGCACAGAAGAATACCATAGATAGGAAGAGTATTGCAGTGCCTATAGTATAAGATGGTTACGAGAATACTTTAAAAGGGTTGAAATATACCTTGGCAAAGAAAAAGGTGGTGAAGGAACTCCATTAAAATGATTATATATCATTGGTTCAATGCATTATCTTGTTTATTCCTATATCCCACCATCCTTCCAAAACTATCTTTATACTTGTATGTATTGTTCTACAAACAGCTATTGCTACGACTTTTTCGTGTTAATGTAATGGTGTGATCTGGATTGTGTTGCAGGTCTTTGTCTACCACAAAGCTTTTCCTATGCCTGCATTGTCATTTAAATTTAATAGCACAGATCCTCTATCTGGTGGTGAAGTGGATGACCAAGCACAGTTCATCTCATCTGTCTGTTGGCGTGATCAGTCCTCTA</genome_strand>
        <mrna_strand>TTGGAATGGCTATATTAAAAGCCAGATCGCTTCAAGTAACTTTGAAGGTGTGGTGCAG.........................................................................GTATGGGACGTCACAAGAAGTCAGGTTTTCATGGAAATGAGAGAACATGAAAGGCGTGTCTGGTCTGTTGACTTTTCTGTAGCAGATCCAACCATGTTGGCTAGCGGGAGTGATGATGGTTCTGTCAAACTCTGGAATATCAATCAGGCAATTCTATTTCTGCACTTGGTGGATGTCAGCTTTGAAACTAAAC...................................................................................GGAGCAAGTGTTGGAACCATCAAAACAAAAGCCAATGTCTGCTGCGTTCAGTTCCCCTTTGATTCTGGTCGCTCCCTTGCTTTTGGTTCAGCAGATCACAAGATATATTACTATGATCTACGTAACTCAAAAATGCCTCTATGCACATTAATCGGGCACAACAAGACTGTGAGCTATGTCAAGTTCATAGATTCCACAACGCTTGTGTCTGCATCTACAGATAACACGTTAAAGCTATGGGATTTGTCAATTTGCACATCCCGGATTGTTGATAAACCTCTTCAGTCATTTACTGGACACATGAATGTAAAG........................................................................................................................................................................................................................................................................................................................AACTTTGTTGGCTTATCTGTATCTGAAGGTTACATTGCTACTGGCTCAGAGACAAATGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTTGTGTATCACAAAGCTTTTCCTATGCCTGCATTATCATTTAAATTTAATAGCACAGATCCACTATCTGGTGATGAAGTGGATGACCAAGCACAGTTTATCTCATCTGTTTGTTGGCGTGGTCAGGCCTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E551135" ref_strand="+" ref_description="SGN-E551135 [TUS-55-G5]">
      <seq>gtcacaagaagtcaggttttcatggaaatgagagaacatgaaaggcgtgtctggtctgttgacttttctgcagcagatccaaccatgttggctagcgggagtgatgatggttctgtcaaactctggaatatcaatcaggcaattctatttctgcacttggtggatgtcagctttgaaactaaacggagtaagtgttggaaccatcaaaacaaaagccaatgtctgctgcgttcagttcccctttgattctggtcgctcccttgcttttggttcagctgatcacaagatatattactatgatctacgtaactcaaaaatgcctctatgcacattaatcgggcacaacaagactgtgagctatgtcaagttcatagattccacaacgcttgtgtctgcatctacagataacacattaaaactatgggatttgtcaatttgcacatcccggattcttgatacacctcttcagtcatttactggacacatgaatgtaaagaactttgttggcttatctgtatctgaaagttacattgctac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="10550" stop="12081"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10850" g_stop="11033" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="184" r_length="184" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11034" i_stop="11116" i_length="83">
            <donor d_prob="0.662" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11117" g_stop="11428" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="185" r_stop="496" r_length="312" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11429" i_stop="11740" i_length="312">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.825" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11741" g_stop="11781" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="497" r_stop="537" r_length="41" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E551135" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>537</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E551135" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10850" e_stop="11033"/>
          <exon e_start="11117" e_stop="11428"/>
          <exon e_start="11741" e_stop="11781"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCACAAGAAGTCAGGTTTTCATGGAAATGAGAGAACATGAAAGGCGTGTCTGGTCTGTTGACTTTTCTGCAGCAGATCCAACCATGTTGGCTAGCGGGAGTGATGATGGTTCTGTCAAACTCTGGAATATCAATCAGGCAATTCTATTTCTGCACTTGGTGGATGTCAGCTTTGAAACTAAACGTACTACTGTCATCTAGTATGTTAATGTGTAGATAAAAACTGTGTGTAATAAGTTGTTTTTCTTAACTGGGTTGGTACTGCAGGGAGTAAGTGTTGGAACCATCAAAACAAAAGCCAATGTCTGCTGCGTTCAGTTCCCCTTTGATTCTGGTCGCTCCCTTGCTTTTGGTTCAGCTGATCACAAGATATATTACTATGATCTACGTAACTCAAAAATGCCTCTATGCACATTAATCGGGCACAACAAGACTGTGAGCTATGTCAAGTTCATAGATTCCACAACGCTTGTGTCTGCATCTACAGATAACACATTAAAACTATGGGATTTGTCAATTTGCACATCCCGGATTCTTGATACACCTCTTCAGTCATTTACTGGACACATGAATGTAAAGGTATTTCTCTTTATCCATGTCACCTGAAGAAGACAGATTTTCATGTCTTCGCTGTACTCTTTGCTTCCTTTTGGCGCTCTTTGCTGCAGTTGAAAAGATGGGCTGTCATACAAATTTAAATTTAAATACATACAATTTGTAAATGCTTAATGAATCTGTAGCCTTTTAACATAGGAGATCATCCCTGAAATAATTTATCAGAAATGAGATTGAACTTCAGTTGTGGTTAAATGTGCTTTACTGTGAATGAGATAGAACATCATTTATGGTTGAATGTCCTTTGCTTCTGATAAAAGTATTCTTGCATTTCAGAACTTTGTTGGCTTATCTGTATCTGAAGGTTACATTGCTAC</genome_strand>
        <mrna_strand>GTCACAAGAAGTCAGGTTTTCATGGAAATGAGAGAACATGAAAGGCGTGTCTGGTCTGTTGACTTTTCTGCAGCAGATCCAACCATGTTGGCTAGCGGGAGTGATGATGGTTCTGTCAAACTCTGGAATATCAATCAGGCAATTCTATTTCTGCACTTGGTGGATGTCAGCTTTGAAACTAAAC...................................................................................GGAGTAAGTGTTGGAACCATCAAAACAAAAGCCAATGTCTGCTGCGTTCAGTTCCCCTTTGATTCTGGTCGCTCCCTTGCTTTTGGTTCAGCTGATCACAAGATATATTACTATGATCTACGTAACTCAAAAATGCCTCTATGCACATTAATCGGGCACAACAAGACTGTGAGCTATGTCAAGTTCATAGATTCCACAACGCTTGTGTCTGCATCTACAGATAACACATTAAAACTATGGGATTTGTCAATTTGCACATCCCGGATTCTTGATACACCTCTTCAGTCATTTACTGGACACATGAATGTAAAG........................................................................................................................................................................................................................................................................................................................AACTTTGTTGGCTTATCTGTATCTGAAAGTTACATTGCTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E688928" ref_strand="+" ref_description="SGN-E688928 [t3_tus_55_G05]">
      <seq>gtcacaagaagtcaggttttcatggaaatgagagaacatgaaaggcgtgtctggtctgttgacttttctgcagcagatccaaccatgttggctagcgggagtgatgatggttctgtcaaactctggaatatcaatcaggcaattctatttctgcacttggtggatgtcagctttgaaactaaacggagtaagtgttggaaccatcaaaacaaaagccaatgtctgctgcgttcagttcccctttgattctggtcgctcccttgcttttggttcagctgatcacaagatatattactatgatctacgtaactcaaaaatgcctctatgcacattaatcgggcacaacaagactgtgagctatgtcaagttcatagattccacaacgcttgtgtctgcatctacagataacacattaaaactatgggatttgtcaatttgcacatcccggattcttgatacacctcttcagtcatttactggacacatgaatgtaaagaactttgttggcttatctgtatctgaaagttacattgctac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="10550" stop="12081"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10850" g_stop="11033" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="184" r_length="184" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11034" i_stop="11116" i_length="83">
            <donor d_prob="0.662" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11117" g_stop="11428" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="185" r_stop="496" r_length="312" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11429" i_stop="11740" i_length="312">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.825" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11741" g_stop="11781" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="497" r_stop="537" r_length="41" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E688928" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>537</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E688928" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10850" e_stop="11033"/>
          <exon e_start="11117" e_stop="11428"/>
          <exon e_start="11741" e_stop="11781"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCACAAGAAGTCAGGTTTTCATGGAAATGAGAGAACATGAAAGGCGTGTCTGGTCTGTTGACTTTTCTGCAGCAGATCCAACCATGTTGGCTAGCGGGAGTGATGATGGTTCTGTCAAACTCTGGAATATCAATCAGGCAATTCTATTTCTGCACTTGGTGGATGTCAGCTTTGAAACTAAACGTACTACTGTCATCTAGTATGTTAATGTGTAGATAAAAACTGTGTGTAATAAGTTGTTTTTCTTAACTGGGTTGGTACTGCAGGGAGTAAGTGTTGGAACCATCAAAACAAAAGCCAATGTCTGCTGCGTTCAGTTCCCCTTTGATTCTGGTCGCTCCCTTGCTTTTGGTTCAGCTGATCACAAGATATATTACTATGATCTACGTAACTCAAAAATGCCTCTATGCACATTAATCGGGCACAACAAGACTGTGAGCTATGTCAAGTTCATAGATTCCACAACGCTTGTGTCTGCATCTACAGATAACACATTAAAACTATGGGATTTGTCAATTTGCACATCCCGGATTCTTGATACACCTCTTCAGTCATTTACTGGACACATGAATGTAAAGGTATTTCTCTTTATCCATGTCACCTGAAGAAGACAGATTTTCATGTCTTCGCTGTACTCTTTGCTTCCTTTTGGCGCTCTTTGCTGCAGTTGAAAAGATGGGCTGTCATACAAATTTAAATTTAAATACATACAATTTGTAAATGCTTAATGAATCTGTAGCCTTTTAACATAGGAGATCATCCCTGAAATAATTTATCAGAAATGAGATTGAACTTCAGTTGTGGTTAAATGTGCTTTACTGTGAATGAGATAGAACATCATTTATGGTTGAATGTCCTTTGCTTCTGATAAAAGTATTCTTGCATTTCAGAACTTTGTTGGCTTATCTGTATCTGAAGGTTACATTGCTAC</genome_strand>
        <mrna_strand>GTCACAAGAAGTCAGGTTTTCATGGAAATGAGAGAACATGAAAGGCGTGTCTGGTCTGTTGACTTTTCTGCAGCAGATCCAACCATGTTGGCTAGCGGGAGTGATGATGGTTCTGTCAAACTCTGGAATATCAATCAGGCAATTCTATTTCTGCACTTGGTGGATGTCAGCTTTGAAACTAAAC...................................................................................GGAGTAAGTGTTGGAACCATCAAAACAAAAGCCAATGTCTGCTGCGTTCAGTTCCCCTTTGATTCTGGTCGCTCCCTTGCTTTTGGTTCAGCTGATCACAAGATATATTACTATGATCTACGTAACTCAAAAATGCCTCTATGCACATTAATCGGGCACAACAAGACTGTGAGCTATGTCAAGTTCATAGATTCCACAACGCTTGTGTCTGCATCTACAGATAACACATTAAAACTATGGGATTTGTCAATTTGCACATCCCGGATTCTTGATACACCTCTTCAGTCATTTACTGGACACATGAATGTAAAG........................................................................................................................................................................................................................................................................................................................AACTTTGTTGGCTTATCTGTATCTGAAAGTTACATTGCTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E261558" ref_strand="+" ref_description="SGN-E261558 [cLEG-57-D1]">
      <seq>tcacaagaagtcaggttttcatggaaatgagagaacatgaaaggcgtgtctggtctgttgacttttctgcagcagatccaaccatgttggctagcgggagtgatgatggttctgtcaaactctggaatatcaatcaggcaattctatttctgcacttggtggatgtcagctttgaaactaaacggagtaagtgttggaaccatcaaaacaaaagccaatgtctgctgcgttcagttcccctttgattctggtcgctcccttgcttttggttcagctgatcacaagatatattactatgatctacgtaactcaaaaatgcctctatgcacattaatcgggcacaacaagactgtgagctatgtcaagttcatagattccacaacgcttgtgtctgcatctacagataacacattaaaactatgggatttgtcaatttgcacatcccggattcttgatacacctcttcagtcatttactggacacatgaatgtaaagaactttgttggcttatctgtatctgaaggttacattgctactggctcggagacgaatgaggtctttgtctaccacaaagcttttcctatgcctgcattgtcatttaaatttaatagcacagatcctctatctggtggtgaagtggatgaccaagcacagttcatctcatctgtctgttggcgtgatcagtcctctaccttagttgctgcgaattctatgggaaatatcaagctgttggagatggcttaatgtggtccagggttctcaaaggttcgtacttgcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="10551" stop="14481"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10851" g_stop="11033" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="183" r_length="183" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11034" i_stop="11116" i_length="83">
            <donor d_prob="0.662" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11117" g_stop="11428" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="495" r_length="312" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11429" i_stop="11740" i_length="312">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.825" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11741" g_stop="11800" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="496" r_stop="555" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11801" i_stop="13957" i_length="2157">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13958" g_stop="14181" g_length="224"/>
          <reference_exon_boundary r_type="cDNA" r_start="556" r_stop="779" r_length="224" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E261558" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>779</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E261558" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10851" e_stop="11033"/>
          <exon e_start="11117" e_stop="11428"/>
          <exon e_start="11741" e_stop="11800"/>
          <exon e_start="13958" e_stop="14181"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACAAGAAGTCAGGTTTTCATGGAAATGAGAGAACATGAAAGGCGTGTCTGGTCTGTTGACTTTTCTGCAGCAGATCCAACCATGTTGGCTAGCGGGAGTGATGATGGTTCTGTCAAACTCTGGAATATCAATCAGGCAATTCTATTTCTGCACTTGGTGGATGTCAGCTTTGAAACTAAACGTACTACTGTCATCTAGTATGTTAATGTGTAGATAAAAACTGTGTGTAATAAGTTGTTTTTCTTAACTGGGTTGGTACTGCAGGGAGTAAGTGTTGGAACCATCAAAACAAAAGCCAATGTCTGCTGCGTTCAGTTCCCCTTTGATTCTGGTCGCTCCCTTGCTTTTGGTTCAGCTGATCACAAGATATATTACTATGATCTACGTAACTCAAAAATGCCTCTATGCACATTAATCGGGCACAACAAGACTGTGAGCTATGTCAAGTTCATAGATTCCACAACGCTTGTGTCTGCATCTACAGATAACACATTAAAACTATGGGATTTGTCAATTTGCACATCCCGGATTCTTGATACACCTCTTCAGTCATTTACTGGACACATGAATGTAAAGGTATTTCTCTTTATCCATGTCACCTGAAGAAGACAGATTTTCATGTCTTCGCTGTACTCTTTGCTTCCTTTTGGCGCTCTTTGCTGCAGTTGAAAAGATGGGCTGTCATACAAATTTAAATTTAAATACATACAATTTGTAAATGCTTAATGAATCTGTAGCCTTTTAACATAGGAGATCATCCCTGAAATAATTTATCAGAAATGAGATTGAACTTCAGTTGTGGTTAAATGTGCTTTACTGTGAATGAGATAGAACATCATTTATGGTTGAATGTCCTTTGCTTCTGATAAAAGTATTCTTGCATTTCAGAACTTTGTTGGCTTATCTGTATCTGAAGGTTACATTGCTACTGGCTCGGAGACGAATGAGGTATCATTTACTACCGGATATATCACTAATATTACTTGCTTACTAATTCGATCGTAGATGAGCCTTTAGCAATGGTTACATTGTGATGAAAAATGTGTGTCCTGTATGCATCGAGGAAAAACTAGTTCCAGATGCTTGTTAAATTAAGCACATATACATCTAGGCGGAAACATGGGGCTGCAATCAATGTTCTATGTTCAAGCTATTTGTCAAAAATATATATTTAAATTCTTGTTGTGTCTGAAGCATTTTGGTTGATGCTGTTTGTAAATAATCAAATGAATGACTCACAAACTCTTATTTTATGTAAAAGCTGTACCATAATCTTGCTCCACCCTCTTCGTCACAGGCCAGGGTGATTGTTGCTGTTCTCTTTGGAGACACTGGGAATGGATAGAAAAGTATCACATAGATCCACATTGTTGCGCCTTCCCTGCTTCAAAAAATTAATTCTAGTATAGATCCTACTTTAAATCTCATGTGTCTGTAGAAACTTCTCCATCCTTCTGGTCCTTAGTAACATCACATAGATGCTTTATCTGATTTCTTCCCCATTCTATCCTGTGACCTCCATATTTATCACCAGCACCTATCCTTCACGTTTAATCCTCCTCAAAGTTATGATTATTAGCCTTAGGGCTAGCATCTCTCCCATAGTCCCATGGATAATTCCGTTACTTTTAGGCGTTTTTGCTTTTTTTCAGAATAAAACATGGTGTGTGTACTACAGTCTCATAGAAATGTAAGCCTCTCATGTGTAGTTCACAAAACTTATTCTCAGTTATCATTCCGTAACATGGGTAAACTAGATCCCTTTAGGTGTGATTTTGATTTCTTCTGTTTCTCCTTTCCTCTTTTTCACATCATTTGTACTGCCCTCGAAAACCAGTAAGGTATCAAGTTTGAAGGACAGTTCTTCACCTTATATTGTAGTTTCTAGTTTGTGTTAAAAAATTCTTCCATTTTTTGTCTTTTCTCATTATGTTCTTAGTTTTTTCTTAAATAAATTGATGAAATAACCCTAGCCTTTCTGGGATGTGCTTTTCGGATGAAAGTTCTGACATGATGTACGAAGGATCTAAACCTTGCCTGAATAGGTCATGTACATGCGGCAAAATCAGGAACTTTGTGTCTAACCCCCCCCCCCCCCCAACCCAAACAGTAGTACAGAAAGAAAAGAAAATCTACTGTTCCATAAGACGAAACATTTTCCCACCTCTAACCCCCCCCCCCCCTAAACAGTAGTACAGAAAGAAAAGAAAATCTAAGGACTTACTGCATTTTATCCTTATAGGGGAGGAATGACTTTCTTCCACTTGACATATACATGCATACATGGGTTTGTATGTGCACGCCCTCATTTCTGTTTGGAAGTTGGGAGAACTTATTGGGAAACAACATCAATCAACCAACTGTGCATCAACACCAAAACTAGTTGGGAGCAGCACTGTTTTCCACAGAAACTATATAAGAAAATGAAGTATTTACGAGAGAGATAATTTGAAGAACTCAGTTTGACAAGCAAAGATATATACAATGAGGATCATTTTCATGTGCTGCCCAATTAGTAACAAGTCTCTGGCCATTGCCCCTGATATTATACATTAAATTTTTTTAAAAAATTAACAACATGGATTGTTAAGCGGCCAGTCTTGATGATTAAGCTTTCTTCTTTTTCTGATAGGACAACATGACACAATTGATACCAAAAGAAAAGAATTTCCTGTAAAAGTTGCTTTTGCGACCTCTTAGACAGTCCTCTTTCTCCATTAACATGTATTTGGTTACTTCTAATTAGCTGATAGTAACAGTTCCCACATTCACTGCTCATATTTGGTAAACATCAAGAATATGAAAACCTGGGAATAAATAGCACAGAAGAATACCATAGATAGGAAGAGTATTGCAGTGCCTATAGTATAAGATGGTTACGAGAATACTTTAAAAGGGTTGAAATATACCTTGGCAAAGAAAAAGGTGGTGAAGGAACTCCATTAAAATGATTATATATCATTGGTTCAATGCATTATCTTGTTTATTCCTATATCCCACCATCCTTCCAAAACTATCTTTATACTTGTATGTATTGTTCTACAAACAGCTATTGCTACGACTTTTTCGTGTTAATGTAATGGTGTGATCTGGATTGTGTTGCAGGTCTTTGTCTACCACAAAGCTTTTCCTATGCCTGCATTGTCATTTAAATTTAATAGCACAGATCCTCTATCTGGTGGTGAAGTGGATGACCAAGCACAGTTCATCTCATCTGTCTGTTGGCGTGATCAGTCCTCTACCTTAGTTGCTGCGAATTCTATGGGAAATATCAAGCTGTTGGAGATGGCTTAATGTGGTCCATGTTCTCCAAAGGTTCGTACTTGCCT</genome_strand>
        <mrna_strand>TCACAAGAAGTCAGGTTTTCATGGAAATGAGAGAACATGAAAGGCGTGTCTGGTCTGTTGACTTTTCTGCAGCAGATCCAACCATGTTGGCTAGCGGGAGTGATGATGGTTCTGTCAAACTCTGGAATATCAATCAGGCAATTCTATTTCTGCACTTGGTGGATGTCAGCTTTGAAACTAAAC...................................................................................GGAGTAAGTGTTGGAACCATCAAAACAAAAGCCAATGTCTGCTGCGTTCAGTTCCCCTTTGATTCTGGTCGCTCCCTTGCTTTTGGTTCAGCTGATCACAAGATATATTACTATGATCTACGTAACTCAAAAATGCCTCTATGCACATTAATCGGGCACAACAAGACTGTGAGCTATGTCAAGTTCATAGATTCCACAACGCTTGTGTCTGCATCTACAGATAACACATTAAAACTATGGGATTTGTCAATTTGCACATCCCGGATTCTTGATACACCTCTTCAGTCATTTACTGGACACATGAATGTAAAG........................................................................................................................................................................................................................................................................................................................AACTTTGTTGGCTTATCTGTATCTGAAGGTTACATTGCTACTGGCTCGGAGACGAATGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTTGTCTACCACAAAGCTTTTCCTATGCCTGCATTGTCATTTAAATTTAATAGCACAGATCCTCTATCTGGTGGTGAAGTGGATGACCAAGCACAGTTCATCTCATCTGTCTGTTGGCGTGATCAGTCCTCTACCTTAGTTGCTGCGAATTCTATGGGAAATATCAAGCTGTTGGAGATGGCTTAATGTGGTCCAGGGTTCTCAAAGGTTCGTACTTGCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E261352" ref_strand="+" ref_description="SGN-E261352 [cLEG-57-K5]">
      <seq>tcacaagaagtcaggttttcatggaaatgagagaacatgaaaggcgtgtctggtctgttgacttttctgcagcagatccaaccatgttggctagcgggagtgatgatggttctgtcaaactctggaatatcaatcaggcaattctatttctgcacttggtggatgtcagctttgaaactaaacggagtaagtgttggaaccatcaaaacaaaagccaatgtctgctgcgttcagttcccctttgattctggtcgctcccttgcttttggttcagctgatcacaagatatattactatgatctacgtaactcaaaaatgcctctatgcacattaatcgggcacaacaagactgtgagctatgtcaagttcatagattccacaacgcttgtgtctgcatctacagataacacattaaaactatgggatttgtcaatttgcacatcccggattcttgatacacctcttcagtcatttactggacacatgaatgtaaagaactttgttggcttatctgtatctgaaggttacattgctactggctcggagacgaatgaggtctttgtctaccacaaagcttttcctatgcctgcattgtcatttaaatttaatagcacagatcctctatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="10551" stop="14328"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10851" g_stop="11033" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="183" r_length="183" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11034" i_stop="11116" i_length="83">
            <donor d_prob="0.662" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11117" g_stop="11428" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="495" r_length="312" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11429" i_stop="11740" i_length="312">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.825" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11741" g_stop="11800" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="496" r_stop="555" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11801" i_stop="13957" i_length="2157">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13958" g_stop="14028" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="556" r_stop="626" r_length="71" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E261352" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>626</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E261352" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10851" e_stop="11033"/>
          <exon e_start="11117" e_stop="11428"/>
          <exon e_start="11741" e_stop="11800"/>
          <exon e_start="13958" e_stop="14028"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACAAGAAGTCAGGTTTTCATGGAAATGAGAGAACATGAAAGGCGTGTCTGGTCTGTTGACTTTTCTGCAGCAGATCCAACCATGTTGGCTAGCGGGAGTGATGATGGTTCTGTCAAACTCTGGAATATCAATCAGGCAATTCTATTTCTGCACTTGGTGGATGTCAGCTTTGAAACTAAACGTACTACTGTCATCTAGTATGTTAATGTGTAGATAAAAACTGTGTGTAATAAGTTGTTTTTCTTAACTGGGTTGGTACTGCAGGGAGTAAGTGTTGGAACCATCAAAACAAAAGCCAATGTCTGCTGCGTTCAGTTCCCCTTTGATTCTGGTCGCTCCCTTGCTTTTGGTTCAGCTGATCACAAGATATATTACTATGATCTACGTAACTCAAAAATGCCTCTATGCACATTAATCGGGCACAACAAGACTGTGAGCTATGTCAAGTTCATAGATTCCACAACGCTTGTGTCTGCATCTACAGATAACACATTAAAACTATGGGATTTGTCAATTTGCACATCCCGGATTCTTGATACACCTCTTCAGTCATTTACTGGACACATGAATGTAAAGGTATTTCTCTTTATCCATGTCACCTGAAGAAGACAGATTTTCATGTCTTCGCTGTACTCTTTGCTTCCTTTTGGCGCTCTTTGCTGCAGTTGAAAAGATGGGCTGTCATACAAATTTAAATTTAAATACATACAATTTGTAAATGCTTAATGAATCTGTAGCCTTTTAACATAGGAGATCATCCCTGAAATAATTTATCAGAAATGAGATTGAACTTCAGTTGTGGTTAAATGTGCTTTACTGTGAATGAGATAGAACATCATTTATGGTTGAATGTCCTTTGCTTCTGATAAAAGTATTCTTGCATTTCAGAACTTTGTTGGCTTATCTGTATCTGAAGGTTACATTGCTACTGGCTCGGAGACGAATGAGGTATCATTTACTACCGGATATATCACTAATATTACTTGCTTACTAATTCGATCGTAGATGAGCCTTTAGCAATGGTTACATTGTGATGAAAAATGTGTGTCCTGTATGCATCGAGGAAAAACTAGTTCCAGATGCTTGTTAAATTAAGCACATATACATCTAGGCGGAAACATGGGGCTGCAATCAATGTTCTATGTTCAAGCTATTTGTCAAAAATATATATTTAAATTCTTGTTGTGTCTGAAGCATTTTGGTTGATGCTGTTTGTAAATAATCAAATGAATGACTCACAAACTCTTATTTTATGTAAAAGCTGTACCATAATCTTGCTCCACCCTCTTCGTCACAGGCCAGGGTGATTGTTGCTGTTCTCTTTGGAGACACTGGGAATGGATAGAAAAGTATCACATAGATCCACATTGTTGCGCCTTCCCTGCTTCAAAAAATTAATTCTAGTATAGATCCTACTTTAAATCTCATGTGTCTGTAGAAACTTCTCCATCCTTCTGGTCCTTAGTAACATCACATAGATGCTTTATCTGATTTCTTCCCCATTCTATCCTGTGACCTCCATATTTATCACCAGCACCTATCCTTCACGTTTAATCCTCCTCAAAGTTATGATTATTAGCCTTAGGGCTAGCATCTCTCCCATAGTCCCATGGATAATTCCGTTACTTTTAGGCGTTTTTGCTTTTTTTCAGAATAAAACATGGTGTGTGTACTACAGTCTCATAGAAATGTAAGCCTCTCATGTGTAGTTCACAAAACTTATTCTCAGTTATCATTCCGTAACATGGGTAAACTAGATCCCTTTAGGTGTGATTTTGATTTCTTCTGTTTCTCCTTTCCTCTTTTTCACATCATTTGTACTGCCCTCGAAAACCAGTAAGGTATCAAGTTTGAAGGACAGTTCTTCACCTTATATTGTAGTTTCTAGTTTGTGTTAAAAAATTCTTCCATTTTTTGTCTTTTCTCATTATGTTCTTAGTTTTTTCTTAAATAAATTGATGAAATAACCCTAGCCTTTCTGGGATGTGCTTTTCGGATGAAAGTTCTGACATGATGTACGAAGGATCTAAACCTTGCCTGAATAGGTCATGTACATGCGGCAAAATCAGGAACTTTGTGTCTAACCCCCCCCCCCCCCCAACCCAAACAGTAGTACAGAAAGAAAAGAAAATCTACTGTTCCATAAGACGAAACATTTTCCCACCTCTAACCCCCCCCCCCCCTAAACAGTAGTACAGAAAGAAAAGAAAATCTAAGGACTTACTGCATTTTATCCTTATAGGGGAGGAATGACTTTCTTCCACTTGACATATACATGCATACATGGGTTTGTATGTGCACGCCCTCATTTCTGTTTGGAAGTTGGGAGAACTTATTGGGAAACAACATCAATCAACCAACTGTGCATCAACACCAAAACTAGTTGGGAGCAGCACTGTTTTCCACAGAAACTATATAAGAAAATGAAGTATTTACGAGAGAGATAATTTGAAGAACTCAGTTTGACAAGCAAAGATATATACAATGAGGATCATTTTCATGTGCTGCCCAATTAGTAACAAGTCTCTGGCCATTGCCCCTGATATTATACATTAAATTTTTTTAAAAAATTAACAACATGGATTGTTAAGCGGCCAGTCTTGATGATTAAGCTTTCTTCTTTTTCTGATAGGACAACATGACACAATTGATACCAAAAGAAAAGAATTTCCTGTAAAAGTTGCTTTTGCGACCTCTTAGACAGTCCTCTTTCTCCATTAACATGTATTTGGTTACTTCTAATTAGCTGATAGTAACAGTTCCCACATTCACTGCTCATATTTGGTAAACATCAAGAATATGAAAACCTGGGAATAAATAGCACAGAAGAATACCATAGATAGGAAGAGTATTGCAGTGCCTATAGTATAAGATGGTTACGAGAATACTTTAAAAGGGTTGAAATATACCTTGGCAAAGAAAAAGGTGGTGAAGGAACTCCATTAAAATGATTATATATCATTGGTTCAATGCATTATCTTGTTTATTCCTATATCCCACCATCCTTCCAAAACTATCTTTATACTTGTATGTATTGTTCTACAAACAGCTATTGCTACGACTTTTTCGTGTTAATGTAATGGTGTGATCTGGATTGTGTTGCAGGTCTTTGTCTACCACAAAGCTTTTCCTATGCCTGCATTGTCATTTAAATTTAATAGCACAGATCCTCTATC</genome_strand>
        <mrna_strand>TCACAAGAAGTCAGGTTTTCATGGAAATGAGAGAACATGAAAGGCGTGTCTGGTCTGTTGACTTTTCTGCAGCAGATCCAACCATGTTGGCTAGCGGGAGTGATGATGGTTCTGTCAAACTCTGGAATATCAATCAGGCAATTCTATTTCTGCACTTGGTGGATGTCAGCTTTGAAACTAAAC...................................................................................GGAGTAAGTGTTGGAACCATCAAAACAAAAGCCAATGTCTGCTGCGTTCAGTTCCCCTTTGATTCTGGTCGCTCCCTTGCTTTTGGTTCAGCTGATCACAAGATATATTACTATGATCTACGTAACTCAAAAATGCCTCTATGCACATTAATCGGGCACAACAAGACTGTGAGCTATGTCAAGTTCATAGATTCCACAACGCTTGTGTCTGCATCTACAGATAACACATTAAAACTATGGGATTTGTCAATTTGCACATCCCGGATTCTTGATACACCTCTTCAGTCATTTACTGGACACATGAATGTAAAG........................................................................................................................................................................................................................................................................................................................AACTTTGTTGGCTTATCTGTATCTGAAGGTTACATTGCTACTGGCTCGGAGACGAATGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTTGTCTACCACAAAGCTTTTCCTATGCCTGCATTGTCATTTAAATTTAATAGCACAGATCCTCTATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E738772" ref_strand="+" ref_description="SGN-E738772 [LC14DG01]">
      <seq>gcgaccagaatcaaaggggaactgaacgctcccttgcttttggttcagctgatcacaagatatattactatgatctacgtaactcaaaaatgcctctatgcacattaatcgggcacaacaagactgtgagctatgtcaagttcatagattccacaacgcttgtgtctgcatctacagataacacattaaaactatgggatttgtcaatttgcacatcccggattcttgatacacctcttcagtcatttactggacacatgaatgtaaagaactttgttggcttatctgtatctgaaggttacattgctactggctcggagacgaatgaggtctttgtctaccacaaagcttttcctatgcctgcattgtcatttaaatttaatagcacagatcctctatctggtggtgaagtggatgaccaagcacagttcatctcatctgtctgttggcgtgatcagtcctctaccttagttgctgcgaattctatgggaaatatcaagctgttggagatggcttaatgtggtccatgttctccaaaggttcgtacttgccttcaggataaaaagacgtgaacggtaagggttctgcattgatgaacaaataggttgctgtgaagaggtcaactagatcggataccatagtgaacatggagattgccatcatcaagaaaccaagatttttgctagtagtaatcatatagtggaagtagattcaactggaaatatgagaacatatattggtcttagtgtgaaatgctgtatataaaagggaaaggatgcaaatatgaatttctctgtatattctgtaatttccagagttcaaatgaattttcttgaaggaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="10881" stop="14769"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11160" g_stop="11428" g_length="269"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="269" r_length="269" r_score="0.944"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11429" i_stop="11740" i_length="312">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.825" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11741" g_stop="11800" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="329" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11801" i_stop="13957" i_length="2157">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="13958" g_stop="14476" g_length="519"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="848" r_length="519" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E738772" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>848</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E738772" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11160" e_stop="11428"/>
          <exon e_start="11741" e_stop="11800"/>
          <exon e_start="13958" e_stop="14476"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGTTCAGTTCCCCTTTGATTCTGGTCGCTCCCTTGCTTTTGGTTCAGCTGATCACAAGATATATTACTATGATCTACGTAACTCAAAAATGCCTCTATGCACATTAATCGGGCACAACAAGACTGTGAGCTATGTCAAGTTCATAGATTCCACAACGCTTGTGTCTGCATCTACAGATAACACATTAAAACTATGGGATTTGTCAATTTGCACATCCCGGATTCTTGATACACCTCTTCAGTCATTTACTGGACACATGAATGTAAAGGTATTTCTCTTTATCCATGTCACCTGAAGAAGACAGATTTTCATGTCTTCGCTGTACTCTTTGCTTCCTTTTGGCGCTCTTTGCTGCAGTTGAAAAGATGGGCTGTCATACAAATTTAAATTTAAATACATACAATTTGTAAATGCTTAATGAATCTGTAGCCTTTTAACATAGGAGATCATCCCTGAAATAATTTATCAGAAATGAGATTGAACTTCAGTTGTGGTTAAATGTGCTTTACTGTGAATGAGATAGAACATCATTTATGGTTGAATGTCCTTTGCTTCTGATAAAAGTATTCTTGCATTTCAGAACTTTGTTGGCTTATCTGTATCTGAAGGTTACATTGCTACTGGCTCGGAGACGAATGAGGTATCATTTACTACCGGATATATCACTAATATTACTTGCTTACTAATTCGATCGTAGATGAGCCTTTAGCAATGGTTACATTGTGATGAAAAATGTGTGTCCTGTATGCATCGAGGAAAAACTAGTTCCAGATGCTTGTTAAATTAAGCACATATACATCTAGGCGGAAACATGGGGCTGCAATCAATGTTCTATGTTCAAGCTATTTGTCAAAAATATATATTTAAATTCTTGTTGTGTCTGAAGCATTTTGGTTGATGCTGTTTGTAAATAATCAAATGAATGACTCACAAACTCTTATTTTATGTAAAAGCTGTACCATAATCTTGCTCCACCCTCTTCGTCACAGGCCAGGGTGATTGTTGCTGTTCTCTTTGGAGACACTGGGAATGGATAGAAAAGTATCACATAGATCCACATTGTTGCGCCTTCCCTGCTTCAAAAAATTAATTCTAGTATAGATCCTACTTTAAATCTCATGTGTCTGTAGAAACTTCTCCATCCTTCTGGTCCTTAGTAACATCACATAGATGCTTTATCTGATTTCTTCCCCATTCTATCCTGTGACCTCCATATTTATCACCAGCACCTATCCTTCACGTTTAATCCTCCTCAAAGTTATGATTATTAGCCTTAGGGCTAGCATCTCTCCCATAGTCCCATGGATAATTCCGTTACTTTTAGGCGTTTTTGCTTTTTTTCAGAATAAAACATGGTGTGTGTACTACAGTCTCATAGAAATGTAAGCCTCTCATGTGTAGTTCACAAAACTTATTCTCAGTTATCATTCCGTAACATGGGTAAACTAGATCCCTTTAGGTGTGATTTTGATTTCTTCTGTTTCTCCTTTCCTCTTTTTCACATCATTTGTACTGCCCTCGAAAACCAGTAAGGTATCAAGTTTGAAGGACAGTTCTTCACCTTATATTGTAGTTTCTAGTTTGTGTTAAAAAATTCTTCCATTTTTTGTCTTTTCTCATTATGTTCTTAGTTTTTTCTTAAATAAATTGATGAAATAACCCTAGCCTTTCTGGGATGTGCTTTTCGGATGAAAGTTCTGACATGATGTACGAAGGATCTAAACCTTGCCTGAATAGGTCATGTACATGCGGCAAAATCAGGAACTTTGTGTCTAACCCCCCCCCCCCCCCAACCCAAACAGTAGTACAGAAAGAAAAGAAAATCTACTGTTCCATAAGACGAAACATTTTCCCACCTCTAACCCCCCCCCCCCCTAAACAGTAGTACAGAAAGAAAAGAAAATCTAAGGACTTACTGCATTTTATCCTTATAGGGGAGGAATGACTTTCTTCCACTTGACATATACATGCATACATGGGTTTGTATGTGCACGCCCTCATTTCTGTTTGGAAGTTGGGAGAACTTATTGGGAAACAACATCAATCAACCAACTGTGCATCAACACCAAAACTAGTTGGGAGCAGCACTGTTTTCCACAGAAACTATATAAGAAAATGAAGTATTTACGAGAGAGATAATTTGAAGAACTCAGTTTGACAAGCAAAGATATATACAATGAGGATCATTTTCATGTGCTGCCCAATTAGTAACAAGTCTCTGGCCATTGCCCCTGATATTATACATTAAATTTTTTTAAAAAATTAACAACATGGATTGTTAAGCGGCCAGTCTTGATGATTAAGCTTTCTTCTTTTTCTGATAGGACAACATGACACAATTGATACCAAAAGAAAAGAATTTCCTGTAAAAGTTGCTTTTGCGACCTCTTAGACAGTCCTCTTTCTCCATTAACATGTATTTGGTTACTTCTAATTAGCTGATAGTAACAGTTCCCACATTCACTGCTCATATTTGGTAAACATCAAGAATATGAAAACCTGGGAATAAATAGCACAGAAGAATACCATAGATAGGAAGAGTATTGCAGTGCCTATAGTATAAGATGGTTACGAGAATACTTTAAAAGGGTTGAAATATACCTTGGCAAAGAAAAAGGTGGTGAAGGAACTCCATTAAAATGATTATATATCATTGGTTCAATGCATTATCTTGTTTATTCCTATATCCCACCATCCTTCCAAAACTATCTTTATACTTGTATGTATTGTTCTACAAACAGCTATTGCTACGACTTTTTCGTGTTAATGTAATGGTGTGATCTGGATTGTGTTGCAGGTCTTTGTCTACCACAAAGCTTTTCCTATGCCTGCATTGTCATTTAAATTTAATAGCACAGATCCTCTATCTGGTGGTGAAGTGGATGACCAAGCACAGTTCATCTCATCTGTCTGTTGGCGTGATCAGTCCTCTACCTTAGTTGCTGCGAATTCTATGGGAAATATCAAGCTGTTGGAGATGGCTTAATGTGGTCCATGTTCTCCAAAGGTTCGTACTTGCCTTCAGGATAAAAAGACGTGAACGGTAAGGGTTCTGCATTGATGAACAAATAGGTTGCTGTGAAGAGGTCAACTAGATCGGATACCATAGTGAACATGGAGATTGCCATCATCAAGAAACCAAGATTTTTGCTAGTAGTAATCATATAGTGGAAGTAGATTCAACTGGAAATATGAGAACATATATTGGTCTTAGTGTGAAATGCTGTATATAAAAGGGAAAGGATGCAAATATGAATTTCTCTGTATATTCTGTAATTTCCAGAGTTCAAATGAATTTTCTTGAAGGAACTGTGTG</genome_strand>
        <mrna_strand>GCGACCAGAATCAAAGGGGAACTGAACGCTCCCTTGCTTTTGGTTCAGCTGATCACAAGATATATTACTATGATCTACGTAACTCAAAAATGCCTCTATGCACATTAATCGGGCACAACAAGACTGTGAGCTATGTCAAGTTCATAGATTCCACAACGCTTGTGTCTGCATCTACAGATAACACATTAAAACTATGGGATTTGTCAATTTGCACATCCCGGATTCTTGATACACCTCTTCAGTCATTTACTGGACACATGAATGTAAAG........................................................................................................................................................................................................................................................................................................................AACTTTGTTGGCTTATCTGTATCTGAAGGTTACATTGCTACTGGCTCGGAGACGAATGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTTGTCTACCACAAAGCTTTTCCTATGCCTGCATTGTCATTTAAATTTAATAGCACAGATCCTCTATCTGGTGGTGAAGTGGATGACCAAGCACAGTTCATCTCATCTGTCTGTTGGCGTGATCAGTCCTCTACCTTAGTTGCTGCGAATTCTATGGGAAATATCAAGCTGTTGGAGATGGCTTAATGTGGTCCATGTTCTCCAAAGGTTCGTACTTGCCTTCAGGATAAAAAGACGTGAACGGTAAGGGTTCTGCATTGATGAACAAATAGGTTGCTGTGAAGAGGTCAACTAGATCGGATACCATAGTGAACATGGAGATTGCCATCATCAAGAAACCAAGATTTTTGCTAGTAGTAATCATATAGTGGAAGTAGATTCAACTGGAAATATGAGAACATATATTGGTCTTAGTGTGAAATGCTGTATATAAAAGGGAAAGGATGCAAATATGAATTTCTCTGTATATTCTGTAATTTCCAGAGTTCAAATGAATTTTCTTGAAGGAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E736743" ref_strand="+" ref_description="SGN-E736743 [LC07AA11]">
      <seq>gcgaccagaatcaaaggggaactgaacgctcccttgcttttggttcagctgatcacaagatatattactatgatctacgtaactcaaaaatgcctctatgcacattaatcgggcacaacaagactgtgagctatgtcaagttcatagattccacaacgcttgtgtctgcatctacagataacacattaaaactatgggatttgtcaatttgcacatcccggattcttgatacacctcttcagtcatttactggacacatgaatgtaaagaactttgttggcttatctgtatctgaaggttacattgctactggctcggagacgaatgaggtctttgtctaccacaaagcttttcctatgcctgcattgtcatttaaatttaatagcacagatcctctatctggtggtgaagtggatgaccaagcacagttcatctcatctgtctgttggcgtgatcagtcctctaccttagttgctgcgaattctatgggaaatatcaagctgttggagatggcttaatgtggtccatgttctccaaaggttcgtacttgccttcaggataaaaagacgtgaacggtaagggttctgcattgatgaacaaataggttgctgtgaagaggtcaactagatcggataccatagtgaacatggagattgccatcatcaagaaaccaagatttttgctagtagtaatcatatagtggaagtagattcaactggaaatatgagaacatatattggtcttagtgtgaaatgctgtatataaaagggaaaggatgcaaatatgaatttctctgaatattctgtaatttccagagttcaaatgaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="10881" stop="14756"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11160" g_stop="11428" g_length="269"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="269" r_length="269" r_score="0.944"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11429" i_stop="11740" i_length="312">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.825" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11741" g_stop="11800" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="329" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11801" i_stop="13957" i_length="2157">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="13958" g_stop="14456" g_length="499"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="828" r_length="499" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E736743" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>828</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E736743" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11160" e_stop="11428"/>
          <exon e_start="11741" e_stop="11800"/>
          <exon e_start="13958" e_stop="14456"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGTTCAGTTCCCCTTTGATTCTGGTCGCTCCCTTGCTTTTGGTTCAGCTGATCACAAGATATATTACTATGATCTACGTAACTCAAAAATGCCTCTATGCACATTAATCGGGCACAACAAGACTGTGAGCTATGTCAAGTTCATAGATTCCACAACGCTTGTGTCTGCATCTACAGATAACACATTAAAACTATGGGATTTGTCAATTTGCACATCCCGGATTCTTGATACACCTCTTCAGTCATTTACTGGACACATGAATGTAAAGGTATTTCTCTTTATCCATGTCACCTGAAGAAGACAGATTTTCATGTCTTCGCTGTACTCTTTGCTTCCTTTTGGCGCTCTTTGCTGCAGTTGAAAAGATGGGCTGTCATACAAATTTAAATTTAAATACATACAATTTGTAAATGCTTAATGAATCTGTAGCCTTTTAACATAGGAGATCATCCCTGAAATAATTTATCAGAAATGAGATTGAACTTCAGTTGTGGTTAAATGTGCTTTACTGTGAATGAGATAGAACATCATTTATGGTTGAATGTCCTTTGCTTCTGATAAAAGTATTCTTGCATTTCAGAACTTTGTTGGCTTATCTGTATCTGAAGGTTACATTGCTACTGGCTCGGAGACGAATGAGGTATCATTTACTACCGGATATATCACTAATATTACTTGCTTACTAATTCGATCGTAGATGAGCCTTTAGCAATGGTTACATTGTGATGAAAAATGTGTGTCCTGTATGCATCGAGGAAAAACTAGTTCCAGATGCTTGTTAAATTAAGCACATATACATCTAGGCGGAAACATGGGGCTGCAATCAATGTTCTATGTTCAAGCTATTTGTCAAAAATATATATTTAAATTCTTGTTGTGTCTGAAGCATTTTGGTTGATGCTGTTTGTAAATAATCAAATGAATGACTCACAAACTCTTATTTTATGTAAAAGCTGTACCATAATCTTGCTCCACCCTCTTCGTCACAGGCCAGGGTGATTGTTGCTGTTCTCTTTGGAGACACTGGGAATGGATAGAAAAGTATCACATAGATCCACATTGTTGCGCCTTCCCTGCTTCAAAAAATTAATTCTAGTATAGATCCTACTTTAAATCTCATGTGTCTGTAGAAACTTCTCCATCCTTCTGGTCCTTAGTAACATCACATAGATGCTTTATCTGATTTCTTCCCCATTCTATCCTGTGACCTCCATATTTATCACCAGCACCTATCCTTCACGTTTAATCCTCCTCAAAGTTATGATTATTAGCCTTAGGGCTAGCATCTCTCCCATAGTCCCATGGATAATTCCGTTACTTTTAGGCGTTTTTGCTTTTTTTCAGAATAAAACATGGTGTGTGTACTACAGTCTCATAGAAATGTAAGCCTCTCATGTGTAGTTCACAAAACTTATTCTCAGTTATCATTCCGTAACATGGGTAAACTAGATCCCTTTAGGTGTGATTTTGATTTCTTCTGTTTCTCCTTTCCTCTTTTTCACATCATTTGTACTGCCCTCGAAAACCAGTAAGGTATCAAGTTTGAAGGACAGTTCTTCACCTTATATTGTAGTTTCTAGTTTGTGTTAAAAAATTCTTCCATTTTTTGTCTTTTCTCATTATGTTCTTAGTTTTTTCTTAAATAAATTGATGAAATAACCCTAGCCTTTCTGGGATGTGCTTTTCGGATGAAAGTTCTGACATGATGTACGAAGGATCTAAACCTTGCCTGAATAGGTCATGTACATGCGGCAAAATCAGGAACTTTGTGTCTAACCCCCCCCCCCCCCCAACCCAAACAGTAGTACAGAAAGAAAAGAAAATCTACTGTTCCATAAGACGAAACATTTTCCCACCTCTAACCCCCCCCCCCCCTAAACAGTAGTACAGAAAGAAAAGAAAATCTAAGGACTTACTGCATTTTATCCTTATAGGGGAGGAATGACTTTCTTCCACTTGACATATACATGCATACATGGGTTTGTATGTGCACGCCCTCATTTCTGTTTGGAAGTTGGGAGAACTTATTGGGAAACAACATCAATCAACCAACTGTGCATCAACACCAAAACTAGTTGGGAGCAGCACTGTTTTCCACAGAAACTATATAAGAAAATGAAGTATTTACGAGAGAGATAATTTGAAGAACTCAGTTTGACAAGCAAAGATATATACAATGAGGATCATTTTCATGTGCTGCCCAATTAGTAACAAGTCTCTGGCCATTGCCCCTGATATTATACATTAAATTTTTTTAAAAAATTAACAACATGGATTGTTAAGCGGCCAGTCTTGATGATTAAGCTTTCTTCTTTTTCTGATAGGACAACATGACACAATTGATACCAAAAGAAAAGAATTTCCTGTAAAAGTTGCTTTTGCGACCTCTTAGACAGTCCTCTTTCTCCATTAACATGTATTTGGTTACTTCTAATTAGCTGATAGTAACAGTTCCCACATTCACTGCTCATATTTGGTAAACATCAAGAATATGAAAACCTGGGAATAAATAGCACAGAAGAATACCATAGATAGGAAGAGTATTGCAGTGCCTATAGTATAAGATGGTTACGAGAATACTTTAAAAGGGTTGAAATATACCTTGGCAAAGAAAAAGGTGGTGAAGGAACTCCATTAAAATGATTATATATCATTGGTTCAATGCATTATCTTGTTTATTCCTATATCCCACCATCCTTCCAAAACTATCTTTATACTTGTATGTATTGTTCTACAAACAGCTATTGCTACGACTTTTTCGTGTTAATGTAATGGTGTGATCTGGATTGTGTTGCAGGTCTTTGTCTACCACAAAGCTTTTCCTATGCCTGCATTGTCATTTAAATTTAATAGCACAGATCCTCTATCTGGTGGTGAAGTGGATGACCAAGCACAGTTCATCTCATCTGTCTGTTGGCGTGATCAGTCCTCTACCTTAGTTGCTGCGAATTCTATGGGAAATATCAAGCTGTTGGAGATGGCTTAATGTGGTCCATGTTCTCCAAAGGTTCGTACTTGCCTTCAGGATAAAAAGACGTGAACGGTAAGGGTTCTGCATTGATGAACAAATAGGTTGCTGTGAAGAGGTCAACTAGATCGGATACCATAGTGAACATGGAGATTGCCATCATCAAGAAACCAAGATTTTTGCTAGTAGTAATCATATAGTGGAAGTAGATTCAACTGGAAATATGAGAACATATATTGGTCTTAGTGTGAAATGCTGTATATAAAAGGGAAAGGATGCAAATATGAATTTCTCTGTATATTCTGTAATTTCCAGAGTTCAAATGAAT</genome_strand>
        <mrna_strand>GCGACCAGAATCAAAGGGGAACTGAACGCTCCCTTGCTTTTGGTTCAGCTGATCACAAGATATATTACTATGATCTACGTAACTCAAAAATGCCTCTATGCACATTAATCGGGCACAACAAGACTGTGAGCTATGTCAAGTTCATAGATTCCACAACGCTTGTGTCTGCATCTACAGATAACACATTAAAACTATGGGATTTGTCAATTTGCACATCCCGGATTCTTGATACACCTCTTCAGTCATTTACTGGACACATGAATGTAAAG........................................................................................................................................................................................................................................................................................................................AACTTTGTTGGCTTATCTGTATCTGAAGGTTACATTGCTACTGGCTCGGAGACGAATGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTTGTCTACCACAAAGCTTTTCCTATGCCTGCATTGTCATTTAAATTTAATAGCACAGATCCTCTATCTGGTGGTGAAGTGGATGACCAAGCACAGTTCATCTCATCTGTCTGTTGGCGTGATCAGTCCTCTACCTTAGTTGCTGCGAATTCTATGGGAAATATCAAGCTGTTGGAGATGGCTTAATGTGGTCCATGTTCTCCAAAGGTTCGTACTTGCCTTCAGGATAAAAAGACGTGAACGGTAAGGGTTCTGCATTGATGAACAAATAGGTTGCTGTGAAGAGGTCAACTAGATCGGATACCATAGTGAACATGGAGATTGCCATCATCAAGAAACCAAGATTTTTGCTAGTAGTAATCATATAGTGGAAGTAGATTCAACTGGAAATATGAGAACATATATTGGTCTTAGTGTGAAATGCTGTATATAAAAGGGAAAGGATGCAAATATGAATTTCTCTGAATATTCTGTAATTTCCAGAGTTCAAATGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E739624" ref_strand="+" ref_description="SGN-E739624 [LC18AG09]">
      <seq>gctaccagaatcaaaggggaactgaacgctcccttgcttttggttcagctgatcacaagatatattactatgatctacgtaactcaaaaatgcctctatgcacattaatcgggcacaacaagactgtgagctatgtcaagttcatagattccacaacgcttgtgtctgcatctacagataacacattaaaactatgggatttgtcaatttgcacatcccggattcttgatacacctcttcagtcatttactggacacatgaatgtaaagaactttgttggcttatctgtatctgaaggttacattgctactggctcggagacgaatgaggtctttgtctaccacaaagcttttcctatgcctgcattgtcatttaaatttaatagcacagatcctctatctggtggtgaagtggatgaccaagcacagttcatctcatctgtctgttggcgtgatcagtcctctaccttagttgctgcgaattctatgggaaatatcaagctgttggagatggcttaatgtggtccatgttctccaaaggttcgtacttgccttcaggataaaaagacgtgaacggtaagggttctgcattgatgaacaaataggttgctgtgaagaggtcaactagatcggataccatagtgaacatggagattgccatcatcaagaaaccaagatttttgctagtagtaatcatatagtggaagtagattcaactggaaatatgagaacatatattggtcttagtgtgaaatgctgtatataaaagggaaaggatgcaaatatgaatttctctgtatattctgtaatttccagagttcaaatgaattttctttgaangaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="10881" stop="14769"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11186" g_stop="11428" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="27" r_stop="269" r_length="243" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11429" i_stop="11740" i_length="312">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.825" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11741" g_stop="11800" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="329" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11801" i_stop="13957" i_length="2157">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="13958" g_stop="14462" g_length="505"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="834" r_length="505" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="841" polyA_stop="850"/>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E739624" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>808</cumulative_length_of_scored_exons>
        <coverage percentage="0.951" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E739624" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11186" e_stop="11428"/>
          <exon e_start="11741" e_stop="11800"/>
          <exon e_start="13958" e_stop="14462"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCTCCCTTGCTTTTGGTTCAGCTGATCACAAGATATATTACTATGATCTACGTAACTCAAAAATGCCTCTATGCACATTAATCGGGCACAACAAGACTGTGAGCTATGTCAAGTTCATAGATTCCACAACGCTTGTGTCTGCATCTACAGATAACACATTAAAACTATGGGATTTGTCAATTTGCACATCCCGGATTCTTGATACACCTCTTCAGTCATTTACTGGACACATGAATGTAAAGGTATTTCTCTTTATCCATGTCACCTGAAGAAGACAGATTTTCATGTCTTCGCTGTACTCTTTGCTTCCTTTTGGCGCTCTTTGCTGCAGTTGAAAAGATGGGCTGTCATACAAATTTAAATTTAAATACATACAATTTGTAAATGCTTAATGAATCTGTAGCCTTTTAACATAGGAGATCATCCCTGAAATAATTTATCAGAAATGAGATTGAACTTCAGTTGTGGTTAAATGTGCTTTACTGTGAATGAGATAGAACATCATTTATGGTTGAATGTCCTTTGCTTCTGATAAAAGTATTCTTGCATTTCAGAACTTTGTTGGCTTATCTGTATCTGAAGGTTACATTGCTACTGGCTCGGAGACGAATGAGGTATCATTTACTACCGGATATATCACTAATATTACTTGCTTACTAATTCGATCGTAGATGAGCCTTTAGCAATGGTTACATTGTGATGAAAAATGTGTGTCCTGTATGCATCGAGGAAAAACTAGTTCCAGATGCTTGTTAAATTAAGCACATATACATCTAGGCGGAAACATGGGGCTGCAATCAATGTTCTATGTTCAAGCTATTTGTCAAAAATATATATTTAAATTCTTGTTGTGTCTGAAGCATTTTGGTTGATGCTGTTTGTAAATAATCAAATGAATGACTCACAAACTCTTATTTTATGTAAAAGCTGTACCATAATCTTGCTCCACCCTCTTCGTCACAGGCCAGGGTGATTGTTGCTGTTCTCTTTGGAGACACTGGGAATGGATAGAAAAGTATCACATAGATCCACATTGTTGCGCCTTCCCTGCTTCAAAAAATTAATTCTAGTATAGATCCTACTTTAAATCTCATGTGTCTGTAGAAACTTCTCCATCCTTCTGGTCCTTAGTAACATCACATAGATGCTTTATCTGATTTCTTCCCCATTCTATCCTGTGACCTCCATATTTATCACCAGCACCTATCCTTCACGTTTAATCCTCCTCAAAGTTATGATTATTAGCCTTAGGGCTAGCATCTCTCCCATAGTCCCATGGATAATTCCGTTACTTTTAGGCGTTTTTGCTTTTTTTCAGAATAAAACATGGTGTGTGTACTACAGTCTCATAGAAATGTAAGCCTCTCATGTGTAGTTCACAAAACTTATTCTCAGTTATCATTCCGTAACATGGGTAAACTAGATCCCTTTAGGTGTGATTTTGATTTCTTCTGTTTCTCCTTTCCTCTTTTTCACATCATTTGTACTGCCCTCGAAAACCAGTAAGGTATCAAGTTTGAAGGACAGTTCTTCACCTTATATTGTAGTTTCTAGTTTGTGTTAAAAAATTCTTCCATTTTTTGTCTTTTCTCATTATGTTCTTAGTTTTTTCTTAAATAAATTGATGAAATAACCCTAGCCTTTCTGGGATGTGCTTTTCGGATGAAAGTTCTGACATGATGTACGAAGGATCTAAACCTTGCCTGAATAGGTCATGTACATGCGGCAAAATCAGGAACTTTGTGTCTAACCCCCCCCCCCCCCCAACCCAAACAGTAGTACAGAAAGAAAAGAAAATCTACTGTTCCATAAGACGAAACATTTTCCCACCTCTAACCCCCCCCCCCCCTAAACAGTAGTACAGAAAGAAAAGAAAATCTAAGGACTTACTGCATTTTATCCTTATAGGGGAGGAATGACTTTCTTCCACTTGACATATACATGCATACATGGGTTTGTATGTGCACGCCCTCATTTCTGTTTGGAAGTTGGGAGAACTTATTGGGAAACAACATCAATCAACCAACTGTGCATCAACACCAAAACTAGTTGGGAGCAGCACTGTTTTCCACAGAAACTATATAAGAAAATGAAGTATTTACGAGAGAGATAATTTGAAGAACTCAGTTTGACAAGCAAAGATATATACAATGAGGATCATTTTCATGTGCTGCCCAATTAGTAACAAGTCTCTGGCCATTGCCCCTGATATTATACATTAAATTTTTTTAAAAAATTAACAACATGGATTGTTAAGCGGCCAGTCTTGATGATTAAGCTTTCTTCTTTTTCTGATAGGACAACATGACACAATTGATACCAAAAGAAAAGAATTTCCTGTAAAAGTTGCTTTTGCGACCTCTTAGACAGTCCTCTTTCTCCATTAACATGTATTTGGTTACTTCTAATTAGCTGATAGTAACAGTTCCCACATTCACTGCTCATATTTGGTAAACATCAAGAATATGAAAACCTGGGAATAAATAGCACAGAAGAATACCATAGATAGGAAGAGTATTGCAGTGCCTATAGTATAAGATGGTTACGAGAATACTTTAAAAGGGTTGAAATATACCTTGGCAAAGAAAAAGGTGGTGAAGGAACTCCATTAAAATGATTATATATCATTGGTTCAATGCATTATCTTGTTTATTCCTATATCCCACCATCCTTCCAAAACTATCTTTATACTTGTATGTATTGTTCTACAAACAGCTATTGCTACGACTTTTTCGTGTTAATGTAATGGTGTGATCTGGATTGTGTTGCAGGTCTTTGTCTACCACAAAGCTTTTCCTATGCCTGCATTGTCATTTAAATTTAATAGCACAGATCCTCTATCTGGTGGTGAAGTGGATGACCAAGCACAGTTCATCTCATCTGTCTGTTGGCGTGATCAGTCCTCTACCTTAGTTGCTGCGAATTCTATGGGAAATATCAAGCTGTTGGAGATGGCTTAATGTGGTCCATGTTCTCCAAAGGTTCGTACTTGCCTTCAGGATAAAAAGACGTGAACGGTAAGGGTTCTGCATTGATGAACAAATAGGTTGCTGTGAAGAGGTCAACTAGATCGGATACCATAGTGAACATGGAGATTGCCATCATCAAGAAACCAAGATTTTTGCTAGTAGTAATCATATAGTGGAAGTAGATTCAACTGGAAATATGAGAACATATATTGGTCTTAGTGTGAAATGCTGTATATAAAAGGGAAAGGATGCAAATATGAATTTCTCTGTATATTCTGTAATTTCCAGAGTTCAAATGAATTTTCTT</genome_strand>
        <mrna_strand>CGCTCCCTTGCTTTTGGTTCAGCTGATCACAAGATATATTACTATGATCTACGTAACTCAAAAATGCCTCTATGCACATTAATCGGGCACAACAAGACTGTGAGCTATGTCAAGTTCATAGATTCCACAACGCTTGTGTCTGCATCTACAGATAACACATTAAAACTATGGGATTTGTCAATTTGCACATCCCGGATTCTTGATACACCTCTTCAGTCATTTACTGGACACATGAATGTAAAG........................................................................................................................................................................................................................................................................................................................AACTTTGTTGGCTTATCTGTATCTGAAGGTTACATTGCTACTGGCTCGGAGACGAATGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTTGTCTACCACAAAGCTTTTCCTATGCCTGCATTGTCATTTAAATTTAATAGCACAGATCCTCTATCTGGTGGTGAAGTGGATGACCAAGCACAGTTCATCTCATCTGTCTGTTGGCGTGATCAGTCCTCTACCTTAGTTGCTGCGAATTCTATGGGAAATATCAAGCTGTTGGAGATGGCTTAATGTGGTCCATGTTCTCCAAAGGTTCGTACTTGCCTTCAGGATAAAAAGACGTGAACGGTAAGGGTTCTGCATTGATGAACAAATAGGTTGCTGTGAAGAGGTCAACTAGATCGGATACCATAGTGAACATGGAGATTGCCATCATCAAGAAACCAAGATTTTTGCTAGTAGTAATCATATAGTGGAAGTAGATTCAACTGGAAATATGAGAACATATATTGGTCTTAGTGTGAAATGCTGTATATAAAAGGGAAAGGATGCAAATATGAATTTCTCTGTATATTCTGTAATTTCCAGAGTTCAAATGAATTTTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E284901" ref_strand="-" ref_description="SGN-E284901 [cLER-19-N1]">
      <seq>tgaaggttacattgctactggctcggagacgaataaggtctttgtctaccacaaagcttttcctatgcctgcattgtcatttaaatttaatagcacagatcctctatctggtggtgaagtggatgaccaagcacagttcatctcatctgtctgttggcgtgatcagtcctctaccttagttgctgcgaattctatgggaaatatcaagctgttggagatggcttaatgtggtccatgttctccaaaggttcgtacttgccttcaggataaaaacacgtgaacggtaagggttttgcattgatgaacacataggttgctgtgaagaggtcaactagatcggataccatagtgaacatggagattgccatcatcaagaaaccaagatttttgctagtagtaatcatatagtggaagtagattccactggaaatatgagaacatatattggtcttagtgtcaaatgctgtatataaaagggaaaggatgcaaatatgcatttctctgtatattctgttgtttccagagttcaaatgaattttcttgaagtaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="11464" stop="14769"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11764" g_stop="11800" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="37" r_length="37" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11801" i_stop="13957" i_length="2157">
            <donor d_prob="0.993" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13958" g_stop="14477" g_length="520"/>
          <reference_exon_boundary r_type="cDNA" r_start="38" r_stop="557" r_length="520" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E284901" ref_strand="-">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E284901" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="11764" e_stop="11800"/>
          <exon e_start="13958" e_stop="14477"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAGGTTACATTGCTACTGGCTCGGAGACGAATGAGGTATCATTTACTACCGGATATATCACTAATATTACTTGCTTACTAATTCGATCGTAGATGAGCCTTTAGCAATGGTTACATTGTGATGAAAAATGTGTGTCCTGTATGCATCGAGGAAAAACTAGTTCCAGATGCTTGTTAAATTAAGCACATATACATCTAGGCGGAAACATGGGGCTGCAATCAATGTTCTATGTTCAAGCTATTTGTCAAAAATATATATTTAAATTCTTGTTGTGTCTGAAGCATTTTGGTTGATGCTGTTTGTAAATAATCAAATGAATGACTCACAAACTCTTATTTTATGTAAAAGCTGTACCATAATCTTGCTCCACCCTCTTCGTCACAGGCCAGGGTGATTGTTGCTGTTCTCTTTGGAGACACTGGGAATGGATAGAAAAGTATCACATAGATCCACATTGTTGCGCCTTCCCTGCTTCAAAAAATTAATTCTAGTATAGATCCTACTTTAAATCTCATGTGTCTGTAGAAACTTCTCCATCCTTCTGGTCCTTAGTAACATCACATAGATGCTTTATCTGATTTCTTCCCCATTCTATCCTGTGACCTCCATATTTATCACCAGCACCTATCCTTCACGTTTAATCCTCCTCAAAGTTATGATTATTAGCCTTAGGGCTAGCATCTCTCCCATAGTCCCATGGATAATTCCGTTACTTTTAGGCGTTTTTGCTTTTTTTCAGAATAAAACATGGTGTGTGTACTACAGTCTCATAGAAATGTAAGCCTCTCATGTGTAGTTCACAAAACTTATTCTCAGTTATCATTCCGTAACATGGGTAAACTAGATCCCTTTAGGTGTGATTTTGATTTCTTCTGTTTCTCCTTTCCTCTTTTTCACATCATTTGTACTGCCCTCGAAAACCAGTAAGGTATCAAGTTTGAAGGACAGTTCTTCACCTTATATTGTAGTTTCTAGTTTGTGTTAAAAAATTCTTCCATTTTTTGTCTTTTCTCATTATGTTCTTAGTTTTTTCTTAAATAAATTGATGAAATAACCCTAGCCTTTCTGGGATGTGCTTTTCGGATGAAAGTTCTGACATGATGTACGAAGGATCTAAACCTTGCCTGAATAGGTCATGTACATGCGGCAAAATCAGGAACTTTGTGTCTAACCCCCCCCCCCCCCCAACCCAAACAGTAGTACAGAAAGAAAAGAAAATCTACTGTTCCATAAGACGAAACATTTTCCCACCTCTAACCCCCCCCCCCCCTAAACAGTAGTACAGAAAGAAAAGAAAATCTAAGGACTTACTGCATTTTATCCTTATAGGGGAGGAATGACTTTCTTCCACTTGACATATACATGCATACATGGGTTTGTATGTGCACGCCCTCATTTCTGTTTGGAAGTTGGGAGAACTTATTGGGAAACAACATCAATCAACCAACTGTGCATCAACACCAAAACTAGTTGGGAGCAGCACTGTTTTCCACAGAAACTATATAAGAAAATGAAGTATTTACGAGAGAGATAATTTGAAGAACTCAGTTTGACAAGCAAAGATATATACAATGAGGATCATTTTCATGTGCTGCCCAATTAGTAACAAGTCTCTGGCCATTGCCCCTGATATTATACATTAAATTTTTTTAAAAAATTAACAACATGGATTGTTAAGCGGCCAGTCTTGATGATTAAGCTTTCTTCTTTTTCTGATAGGACAACATGACACAATTGATACCAAAAGAAAAGAATTTCCTGTAAAAGTTGCTTTTGCGACCTCTTAGACAGTCCTCTTTCTCCATTAACATGTATTTGGTTACTTCTAATTAGCTGATAGTAACAGTTCCCACATTCACTGCTCATATTTGGTAAACATCAAGAATATGAAAACCTGGGAATAAATAGCACAGAAGAATACCATAGATAGGAAGAGTATTGCAGTGCCTATAGTATAAGATGGTTACGAGAATACTTTAAAAGGGTTGAAATATACCTTGGCAAAGAAAAAGGTGGTGAAGGAACTCCATTAAAATGATTATATATCATTGGTTCAATGCATTATCTTGTTTATTCCTATATCCCACCATCCTTCCAAAACTATCTTTATACTTGTATGTATTGTTCTACAAACAGCTATTGCTACGACTTTTTCGTGTTAATGTAATGGTGTGATCTGGATTGTGTTGCAGGTCTTTGTCTACCACAAAGCTTTTCCTATGCCTGCATTGTCATTTAAATTTAATAGCACAGATCCTCTATCTGGTGGTGAAGTGGATGACCAAGCACAGTTCATCTCATCTGTCTGTTGGCGTGATCAGTCCTCTACCTTAGTTGCTGCGAATTCTATGGGAAATATCAAGCTGTTGGAGATGGCTTAATGTGGTCCATGTTCTCCAAAGGTTCGTACTTGCCTTCAGGATAAAAAGACGTGAACGGTAAGGGTTCTGCATTGATGAACAAATAGGTTGCTGTGAAGAGGTCAACTAGATCGGATACCATAGTGAACATGGAGATTGCCATCATCAAGAAACCAAGATTTTTGCTAGTAGTAATCATATAGTGGAAGTAGATTCAACTGGAAATATGAGAACATATATTGGTCTTAGTGTGAAATGCTGTATATAAAAGGGAAAGGATGCAAATATGAATTTCTCTGTATATTCTGTAATTTCCAGAGTTCAAATGAATTTTCTTGAAGGAACTGTGTGA</genome_strand>
        <mrna_strand>TGAAGGTTACATTGCTACTGGCTCGGAGACGAATAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTTGTCTACCACAAAGCTTTTCCTATGCCTGCATTGTCATTTAAATTTAATAGCACAGATCCTCTATCTGGTGGTGAAGTGGATGACCAAGCACAGTTCATCTCATCTGTCTGTTGGCGTGATCAGTCCTCTACCTTAGTTGCTGCGAATTCTATGGGAAATATCAAGCTGTTGGAGATGGCTTAATGTGGTCCATGTTCTCCAAAGGTTCGTACTTGCCTTCAGGATAAAAACACGTGAACGGTAAGGGTTTTGCATTGATGAACACATAGGTTGCTGTGAAGAGGTCAACTAGATCGGATACCATAGTGAACATGGAGATTGCCATCATCAAGAAACCAAGATTTTTGCTAGTAGTAATCATATAGTGGAAGTAGATTCCACTGGAAATATGAGAACATATATTGGTCTTAGTGTCAAATGCTGTATATAAAAGGGAAAGGATGCAAATATGCATTTCTCTGTATATTCTGTTGTTTCCAGAGTTCAAATGAATTTTCTTGAAGTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E217390" ref_strand="+" ref_description="SGN-E217390 [cLEL-21-F23](-)">
      <seq>gctgttggagatggcttaatgtggtccatgttctccaaaggttcgtacttgccttcaggataaaaagacgtgaacggtaagggttctgcattgatgaacaaataggttgctgtgaagaggtcaactagatcggataccatagtgaacatggagattgccatcatcaagaaaccaagatttttgctagtagtaatcatatagtggaagtagattcaactggaaatatgagaacatatattggtcttagtgtgaaatgctgtatataaaagggaaaggatgcaaatatgaatttctctgtatattctgtaatttccagagttcaaatgaattttcttgaaggaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="13828" stop="34753"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14128" g_stop="14484" g_length="357"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="357" r_length="357" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E217390" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>357</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E217390" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14128" e_stop="14484"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGTTGGAGATGGCTTAATGTGGTCCATGTTCTCCAAAGGTTCGTACTTGCCTTCAGGATAAAAAGACGTGAACGGTAAGGGTTCTGCATTGATGAACAAATAGGTTGCTGTGAAGAGGTCAACTAGATCGGATACCATAGTGAACATGGAGATTGCCATCATCAAGAAACCAAGATTTTTGCTAGTAGTAATCATATAGTGGAAGTAGATTCAACTGGAAATATGAGAACATATATTGGTCTTAGTGTGAAATGCTGTATATAAAAGGGAAAGGATGCAAATATGAATTTCTCTGTATATTCTGTAATTTCCAGAGTTCAAATGAATTTTCTTGAAGGAACTGTGTGAATGTGAT</genome_strand>
        <mrna_strand>GCTGTTGGAGATGGCTTAATGTGGTCCATGTTCTCCAAAGGTTCGTACTTGCCTTCAGGATAAAAAGACGTGAACGGTAAGGGTTCTGCATTGATGAACAAATAGGTTGCTGTGAAGAGGTCAACTAGATCGGATACCATAGTGAACATGGAGATTGCCATCATCAAGAAACCAAGATTTTTGCTAGTAGTAATCATATAGTGGAAGTAGATTCAACTGGAAATATGAGAACATATATTGGTCTTAGTGTGAAATGCTGTATATAAAAGGGAAAGGATGCAAATATGAATTTCTCTGTATATTCTGTAATTTCCAGAGTTCAAATGAATTTTCTTGAAGGAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E416800" ref_strand="-" ref_description="SGN-E416800 [STM-23-L19]">
      <seq>gggttggaaagagggtcaaagagcaatgccgcttattatagaccctggtctctataagacaaccaagtctgacatattttgggtctcgccaaagagagctcttcccacagcctttaaactctttgcaggttcagcgtggatgatcgtctctcgtgcttttgtggagtactgcatatggggttgggataatcttcccagaaccttacttatgtactacacaaattttgtctcctctcctgaaggctactttcagactgtagcttgcaatgccccagaatttgctacaactgttattaaccacgacttgcacttcatttcttgggatcgccctccaaaacaacatccacacanattcaacataaatgacacatcaagaatgattgcaagtggtgctgcatttgctcgcaagttcaggcgagatgatcctgttctagacaagattgataaagaactcctccgtcgaaaaaatggtagcttcacaccggggggttggtgtaccagcagaccttcttgtttaaaggttggaaatccagcaaagcttaaaccaggtccaggggctaaaaggcttcggcgtcttattggtaaactagttttgtcaactaatactactaggcaacagcagtgtaagtagttatactttcccatgaaaaaagggaggggattagagagttccattcatagttccagagaataatattaacatcagattatttttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="16628" stop="14477"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16432" g_stop="16421" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="12" r_length="12" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16420" i_stop="16327" i_length="94">
            <donor d_prob="0.991" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16326" g_stop="16211" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="128" r_length="116" r_score="0.974"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16210" i_stop="15375" i_length="836">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.924" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="15374" g_stop="14777" g_length="598"/>
          <reference_exon_boundary r_type="cDNA" r_start="129" r_stop="725" r_length="597" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E416800" ref_strand="-">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>726</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E416800" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="16432" e_stop="16421"/>
          <exon e_start="16326" e_stop="16211"/>
          <exon e_start="15374" e_stop="14777"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGTTGGAAAGAGTATGCTATCCTCTCTTTCTATCTCTCACTTTGTGCAATGTAACTGTATTATACTGAGGTTTAATTTCTGTGTAACTGGATTGATTCTATTCAGGGGTCAAAGGGCAATGCCGCTTATTATAGACCCTGGTCTCTATAAGACAACCAAGTCTGACATATTTTGGGTCTCGCCGAAGAGAGCTCTTCCCACAGCCTTTAAACTCTTTACAGGTTAGTTTTTTATGATTGAATTAACATACTTGTTTAACTATCCTTGAAGTTGTTTACTGATGTTGATTCACCACAAAAGCAAATAGAAGATGCCATGATACTACTTTGGCCCCGTAAAAATTTGTGCTTGTACCATAAGGGCTTTGTGTCAAACCTTAAGACTTGAATCAGTCACTACTATAAAAGCTGAACGATTGGTATTATTTTCAGTTAGAGACTCCTCGAGTTGAAAAGAACGTATGCTAAGACACACTTGAAACTTATCTTTGGACGCTGTCAACCTGCATGTTTGTTTATCAACTATTGTGGTTAGATGAAACTACGACATTTTGCATCAGTTGGACCAGTTAGCGAAGTGTTTCAATTACTGTTGTTACGTCTGTATTCCTCCACACTGAAATCTTTTTTTCTAGAAACACGGTGAAGCATTTGTCAATCTTATGCATGTATGGAAATGGATAGATTACTTTTGACCCTAAGAATAAGGTAAGATCTAGGAAGAAAATACGTAGAATCAGCATGAACTGCATAGATAATGAAGTGAAGTCTCCGTGTAATGCATCCACCATATGGTTTATCTTCTTAACAACAACAACACCATACCTAGTGTAATTCATCAAGTAGGGTCTGGGGAGGGTGTTGTGTTCACAGCATTAACCCTTTACCTTATGAAGTTAGAGAGTTTTTTTTTCGAAAGACCCTCAGCTCAACTCTCAAGTAAAGCATATAAAAAACAGTATGAAAAGGAAATGTAGTAGTGAAGAAGCCAAGTAGAGAATAGATACGGTTATCTTCTTATTTCCGCAGTTATGAAAAATGCTACAAATTTGATACAGGTTCAGCGTGGATGATCCTCTCTCGTGCTTTTGTGGAGTACTGCATATGGGGTTGGGATAATCTTCCCAGAACCTTACTCATGTACTACACAAATTTTGTCTCCTCTCCTGAAGGCTACTTTCAGACTGTAGCTTGCAATGCCCCAGAATTTGCTACAACTGTTATTAACCACGACTTGCACTTCATTTCTTGGGATCGCCCTCCAAAACAACATCCACACAATCTCAACATAAATGACACATCAAGAATGATTGCAAGTGGTGCTGCATTTGCTCGCAAGTTCAAGCGAGATGATCCTGTTCTAGACAAGATTGATAAAGAACTCCTTCGTCGAAAAAATGGTAGCTTTACCCCAGGGGGTTGGTGTACCAGCAGACCTTCTTGTTTAAAGGTTGGAAATCCAGCAAAGCTTAAACCAGGTCCAGGGGCTAAAAGGCTTCGGCGTCTTATTGGTAAACTAGTTTTGTCAACTAATACTACTAGGCAACAGCAGTGTAAGTAGCTATACTTTCCCATGAAAAAAGGGAGGGGATTAGAGAGTTCCATTTATAGATCCAGAGAATAATATTGACATCAGATTATTTTGTAATATAAAGA</genome_strand>
        <mrna_strand>GGGTTGGAAAGA..............................................................................................GGGTCAAAGAGCAATGCCGCTTATTATAGACCCTGGTCTCTATAAGACAACCAAGTCTGACATATTTTGGGTCTCGCCAAAGAGAGCTCTTCCCACAGCCTTTAAACTCTTTGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCAGCGTGGATGATCGTCTCTCGTGCTTTTGTGGAGTACTGCATATGGGGTTGGGATAATCTTCCCAGAACCTTACTTATGTACTACACAAATTTTGTCTCCTCTCCTGAAGGCTACTTTCAGACTGTAGCTTGCAATGCCCCAGAATTTGCTACAACTGTTATTAACCACGACTTGCACTTCATTTCTTGGGATCGCCCTCCAAAACAACATCCACACANATTCAACATAAATGACACATCAAGAATGATTGCAAGTGGTGCTGCATTTGCTCGCAAGTTCAGGCGAGATGATCCTGTTCTAGACAAGATTGATAAAGAACTCCTCCGTCGAAAAAATGGTAGCTTCACACCGGGGGGTTGGTGTACCAGCAGACCTTCTTGTTTAAAGGTTGGAAATCCAGCAAAGCTTAAACCAGGTCCAGGGGCTAAAAGGCTTCGGCGTCTTATTGGTAAACTAGTTTTGTCAACTAATACTACTAGGCAACAGCAGTGTAAGTAGTTATACTTTCCCATGAAAAAAGGGAGGGGATTAGAGAGTTCCATTCATAGTTCCAGAGAATAATATTAACATCAGATTATTTT-TAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E707842" ref_strand="+" ref_description="SGN-E707842 [FA34AE05]">
      <seq>caaagtatgatctagaaaagctttggagaacgttgcaagcattgtatcatccacggaactattatgttgttcatctggacctagaatcatctgtgcaggagaggttagagcttgcttccagagtggagaaagaacccatttttgcacaggttgggaatgtgcatatgatcaccaaagcaaacatggtgacctaccgtggacctaccatggttgctaacactcttcatgcctgcgcgattctcctgaagaagtattcggactgggattggtttattaacctgagtgcttctgattatccactggtgactcaagatgatttactctatactttttccggtttaaaacgagagtacaatttcattgagtacagtagccggctgggttggaaagagggtcaaagggcaatgccgcttattatagaccctggtctctataagacaaccaagtctgacatattttgggtctcgccgaagagagctcttcccacagcctttaaactctttacaggttcagcgtggatgatcctctctcgtgcttttgtggagtactgcatatggggttgggataatcttcccagaaccttactcatgtactacacaaattttgtctcctctcctgaaggctactttcagactgtagcttgcaatgccccagaatttgctacaactgttattaaccacgacttgcacttcatttcttgggatcgccctccaaaacaacatccacacaatctcaacataaatgacacatcaagaatgattgcaagtggtgctgcatttgctcgcaagttcaagcgagatgatcctgttctagacaagattgataaagaactccttcgtcgaaaaaatggtagctttaccccagggggttggtgtnacagcagaccttcttgtttaaaggtggaaatccagcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="17222" stop="14667"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16922" g_stop="16608" g_length="315"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="315" r_length="315" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16607" i_stop="16497" i_length="111">
            <donor d_prob="0.938" d_score="1.00"/>
            <acceptor a_prob="0.554" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16496" g_stop="16421" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="316" r_stop="391" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16420" i_stop="16327" i_length="94">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16326" g_stop="16211" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="392" r_stop="507" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="16210" i_stop="15375" i_length="836">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="15374" g_stop="14967" g_length="408"/>
          <reference_exon_boundary r_type="cDNA" r_start="508" r_stop="914" r_length="407" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E707842" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>915</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E707842" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16922" e_stop="16608"/>
          <exon e_start="16496" e_stop="16421"/>
          <exon e_start="16326" e_stop="16211"/>
          <exon e_start="15374" e_stop="14967"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAGAATGATCTAGAAAAGCTTTGGAGAACGTTGCAAGCATTGTATCATCCACGGAACTATTATGTTGTTCATCTGGACCTAGAATCATCTGTGCAGGAGAGGTTAGAGCTTGCTTCCAGAGTGGAGAAAGAACCCATTTTTGCACAGGTTGGGAATGTGCATATGATCACCAAAGCAAACATGGTGACCTACCGTGGACCTACCATGGTTGCTAACACTCTTCATGCCTGCGCGATTCTCCTGAAGAAGTATTCGGACTGGGATTGGTTTATTAACCTGAGTGCTTCTGATTATCCACTGGTGACTCAAGATGGTTAGTTCTCTGTTTGTTTAGCTTTGTCTACCAGAAAAGCCAATACTTTCTTTTTGGTATTAAGTCAGTCTTGAGTAGTTCTGTAATGTTTCTTTCTTTAATGTTTGACAGATTTACTCTATACTTTTTCCGGTTTAAAACGAGAGTACAATTTCATTGAGTACAGTAGCCGGCTGGGTTGGAAAGAGTATGCTATCCTCTCTTTCTATCTCTCACTTTGTGCAATGTAACTGTATTATACTGAGGTTTAATTTCTGTGTAACTGGATTGATTCTATTCAGGGGTCAAAGGGCAATGCCGCTTATTATAGACCCTGGTCTCTATAAGACAACCAAGTCTGACATATTTTGGGTCTCGCCGAAGAGAGCTCTTCCCACAGCCTTTAAACTCTTTACAGGTTAGTTTTTTATGATTGAATTAACATACTTGTTTAACTATCCTTGAAGTTGTTTACTGATGTTGATTCACCACAAAAGCAAATAGAAGATGCCATGATACTACTTTGGCCCCGTAAAAATTTGTGCTTGTACCATAAGGGCTTTGTGTCAAACCTTAAGACTTGAATCAGTCACTACTATAAAAGCTGAACGATTGGTATTATTTTCAGTTAGAGACTCCTCGAGTTGAAAAGAACGTATGCTAAGACACACTTGAAACTTATCTTTGGACGCTGTCAACCTGCATGTTTGTTTATCAACTATTGTGGTTAGATGAAACTACGACATTTTGCATCAGTTGGACCAGTTAGCGAAGTGTTTCAATTACTGTTGTTACGTCTGTATTCCTCCACACTGAAATCTTTTTTTCTAGAAACACGGTGAAGCATTTGTCAATCTTATGCATGTATGGAAATGGATAGATTACTTTTGACCCTAAGAATAAGGTAAGATCTAGGAAGAAAATACGTAGAATCAGCATGAACTGCATAGATAATGAAGTGAAGTCTCCGTGTAATGCATCCACCATATGGTTTATCTTCTTAACAACAACAACACCATACCTAGTGTAATTCATCAAGTAGGGTCTGGGGAGGGTGTTGTGTTCACAGCATTAACCCTTTACCTTATGAAGTTAGAGAGTTTTTTTTTCGAAAGACCCTCAGCTCAACTCTCAAGTAAAGCATATAAAAAACAGTATGAAAAGGAAATGTAGTAGTGAAGAAGCCAAGTAGAGAATAGATACGGTTATCTTCTTATTTCCGCAGTTATGAAAAATGCTACAAATTTGATACAGGTTCAGCGTGGATGATCCTCTCTCGTGCTTTTGTGGAGTACTGCATATGGGGTTGGGATAATCTTCCCAGAACCTTACTCATGTACTACACAAATTTTGTCTCCTCTCCTGAAGGCTACTTTCAGACTGTAGCTTGCAATGCCCCAGAATTTGCTACAACTGTTATTAACCACGACTTGCACTTCATTTCTTGGGATCGCCCTCCAAAACAACATCCACACAATCTCAACATAAATGACACATCAAGAATGATTGCAAGTGGTGCTGCATTTGCTCGCAAGTTCAAGCGAGATGATCCTGTTCTAGACAAGATTGATAAAGAACTCCTTCGTCGAAAAAATGGTAGCTTTACCCCAGGGGGTTGGTGTACCAGCAGACCTTCTTGTTTAAAGGTTGGAAATCCAGCAA</genome_strand>
        <mrna_strand>CAAAGTATGATCTAGAAAAGCTTTGGAGAACGTTGCAAGCATTGTATCATCCACGGAACTATTATGTTGTTCATCTGGACCTAGAATCATCTGTGCAGGAGAGGTTAGAGCTTGCTTCCAGAGTGGAGAAAGAACCCATTTTTGCACAGGTTGGGAATGTGCATATGATCACCAAAGCAAACATGGTGACCTACCGTGGACCTACCATGGTTGCTAACACTCTTCATGCCTGCGCGATTCTCCTGAAGAAGTATTCGGACTGGGATTGGTTTATTAACCTGAGTGCTTCTGATTATCCACTGGTGACTCAAGATG...............................................................................................................ATTTACTCTATACTTTTTCCGGTTTAAAACGAGAGTACAATTTCATTGAGTACAGTAGCCGGCTGGGTTGGAAAGA..............................................................................................GGGTCAAAGGGCAATGCCGCTTATTATAGACCCTGGTCTCTATAAGACAACCAAGTCTGACATATTTTGGGTCTCGCCGAAGAGAGCTCTTCCCACAGCCTTTAAACTCTTTACAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCAGCGTGGATGATCCTCTCTCGTGCTTTTGTGGAGTACTGCATATGGGGTTGGGATAATCTTCCCAGAACCTTACTCATGTACTACACAAATTTTGTCTCCTCTCCTGAAGGCTACTTTCAGACTGTAGCTTGCAATGCCCCAGAATTTGCTACAACTGTTATTAACCACGACTTGCACTTCATTTCTTGGGATCGCCCTCCAAAACAACATCCACACAATCTCAACATAAATGACACATCAAGAATGATTGCAAGTGGTGCTGCATTTGCTCGCAAGTTCAAGCGAGATGATCCTGTTCTAGACAAGATTGATAAAGAACTCCTTCGTCGAAAAAATGGTAGCTTTACCCCAGGGGGTTGGTGTNACAGCAGACCTTCTTGTTTAAAGG-TGGAAATCCAGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E709005" ref_strand="+" ref_description="SGN-E709005 [FA42BF03]">
      <seq>cccatttaaccatttttgcacaggttgggaatgtgcatatgatcaccaaagcaaacatggtgacctaccgtggacctaccatggttgctaacactcttcatgcctgcgcgattctcctgaagaagtattcggactgggattggtttattaacctgagtgcttctgattatccactggtgactcaagatgatttactctatactttttccggcttaaaacgagagtacaatttcattgagtacagtagccggctgggttggaaacagggtcaaagggcaatgccgcttattatagaccctggtctctataagacaaccaagtctgacatattttgggtctcgccgaagagagctcttcccacagcctttaaactctttacaggctcagcgtggatgatcctctctcgtgcttttgtggagtactgcatatggggctgggataatcttcccacaaacttactcatgtactacacaaattttctctcctctcctgaaggctacttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="17090" stop="14953"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16796" g_stop="16608" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="189" r_length="189" r_score="0.963"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16607" i_stop="16497" i_length="111">
            <donor d_prob="0.938" d_score="1.00"/>
            <acceptor a_prob="0.554" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16496" g_stop="16421" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="265" r_length="76" r_score="0.974"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16420" i_stop="16327" i_length="94">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16326" g_stop="16211" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="381" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="16210" i_stop="15375" i_length="836">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="15374" g_stop="15253" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="382" r_stop="503" r_length="122" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E709005" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>503</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E709005" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16796" e_stop="16608"/>
          <exon e_start="16496" e_stop="16421"/>
          <exon e_start="16326" e_stop="16211"/>
          <exon e_start="15374" e_stop="15253"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAAGAACCCATTTTTGCACAGGTTGGGAATGTGCATATGATCACCAAAGCAAACATGGTGACCTACCGTGGACCTACCATGGTTGCTAACACTCTTCATGCCTGCGCGATTCTCCTGAAGAAGTATTCGGACTGGGATTGGTTTATTAACCTGAGTGCTTCTGATTATCCACTGGTGACTCAAGATGGTTAGTTCTCTGTTTGTTTAGCTTTGTCTACCAGAAAAGCCAATACTTTCTTTTTGGTATTAAGTCAGTCTTGAGTAGTTCTGTAATGTTTCTTTCTTTAATGTTTGACAGATTTACTCTATACTTTTTCCGGTTTAAAACGAGAGTACAATTTCATTGAGTACAGTAGCCGGCTGGGTTGGAAAGAGTATGCTATCCTCTCTTTCTATCTCTCACTTTGTGCAATGTAACTGTATTATACTGAGGTTTAATTTCTGTGTAACTGGATTGATTCTATTCAGGGGTCAAAGGGCAATGCCGCTTATTATAGACCCTGGTCTCTATAAGACAACCAAGTCTGACATATTTTGGGTCTCGCCGAAGAGAGCTCTTCCCACAGCCTTTAAACTCTTTACAGGTTAGTTTTTTATGATTGAATTAACATACTTGTTTAACTATCCTTGAAGTTGTTTACTGATGTTGATTCACCACAAAAGCAAATAGAAGATGCCATGATACTACTTTGGCCCCGTAAAAATTTGTGCTTGTACCATAAGGGCTTTGTGTCAAACCTTAAGACTTGAATCAGTCACTACTATAAAAGCTGAACGATTGGTATTATTTTCAGTTAGAGACTCCTCGAGTTGAAAAGAACGTATGCTAAGACACACTTGAAACTTATCTTTGGACGCTGTCAACCTGCATGTTTGTTTATCAACTATTGTGGTTAGATGAAACTACGACATTTTGCATCAGTTGGACCAGTTAGCGAAGTGTTTCAATTACTGTTGTTACGTCTGTATTCCTCCACACTGAAATCTTTTTTTCTAGAAACACGGTGAAGCATTTGTCAATCTTATGCATGTATGGAAATGGATAGATTACTTTTGACCCTAAGAATAAGGTAAGATCTAGGAAGAAAATACGTAGAATCAGCATGAACTGCATAGATAATGAAGTGAAGTCTCCGTGTAATGCATCCACCATATGGTTTATCTTCTTAACAACAACAACACCATACCTAGTGTAATTCATCAAGTAGGGTCTGGGGAGGGTGTTGTGTTCACAGCATTAACCCTTTACCTTATGAAGTTAGAGAGTTTTTTTTTCGAAAGACCCTCAGCTCAACTCTCAAGTAAAGCATATAAAAAACAGTATGAAAAGGAAATGTAGTAGTGAAGAAGCCAAGTAGAGAATAGATACGGTTATCTTCTTATTTCCGCAGTTATGAAAAATGCTACAAATTTGATACAGGTTCAGCGTGGATGATCCTCTCTCGTGCTTTTGTGGAGTACTGCATATGGGGTTGGGATAATCTTCCCAGAACCTTACTCATGTACTACACAAATTTTGTCTCCTCTCCTGAAGGCTACTTT</genome_strand>
        <mrna_strand>CCCATTTAACCATTTTTGCACAGGTTGGGAATGTGCATATGATCACCAAAGCAAACATGGTGACCTACCGTGGACCTACCATGGTTGCTAACACTCTTCATGCCTGCGCGATTCTCCTGAAGAAGTATTCGGACTGGGATTGGTTTATTAACCTGAGTGCTTCTGATTATCCACTGGTGACTCAAGATG...............................................................................................................ATTTACTCTATACTTTTTCCGGCTTAAAACGAGAGTACAATTTCATTGAGTACAGTAGCCGGCTGGGTTGGAAACA..............................................................................................GGGTCAAAGGGCAATGCCGCTTATTATAGACCCTGGTCTCTATAAGACAACCAAGTCTGACATATTTTGGGTCTCGCCGAAGAGAGCTCTTCCCACAGCCTTTAAACTCTTTACAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAGCGTGGATGATCCTCTCTCGTGCTTTTGTGGAGTACTGCATATGGGGCTGGGATAATCTTCCCACAAACTTACTCATGTACTACACAAATTTTCTCTCCTCTCCTGAAGGCTACTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E478029" ref_strand="+" ref_description="SGN-E478029 [cSTD-2-D22]">
      <seq>attttcaaggaattaatactagcagagagagagaaaaaatagaagagatctgaagaggggtctgactagtttcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagggaggggtaacagtcttttctctaaatctttgcggggggtttttgctatactcagatcaggcacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaagtgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattactgagccaataaaattcggctctcatgggactgaagaacctaagaaggaggaagtaagcagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcagatccattcgttctata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26524" stop="28895"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26824" g_stop="27012" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="192" r_length="192" r_score="0.905"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="0.84"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28595" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="193" r_stop="471" r_length="279" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E478029" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>465</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E478029" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26824" e_stop="27012"/>
          <exon e_start="28320" e_stop="28595"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTCAA-GATTTTATAGTAGCAGAGAGAGA-AAAAACT-GAAGAGATCTGAAGAGGGGTCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCT---AAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATA</genome_strand>
        <mrna_strand>ATTTTCAAGGAATTAATACTAGCAGAGAGAGAGAAAAAATAGAAGAGATCTGAAGAGGGGTCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGGGTAACAGTCTTTTCTCTAAATCTTTGCGGGGGGTTTTTGCTATACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGCACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAAGTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACTGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGAAGGAGGAAGTAAGCAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGATCCATTCGTTCTATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E247537" ref_strand="+" ref_description="SGN-E247537 [cLEF-42-G22]">
      <seq>aaaaaactgaagagatctgaagaggggtctgactagtttcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagggaggagtaacagtcttttctctaaatctctgcatttagtttttgctgtactcagatcagggacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaactgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattacggagccaataaaattcggctctcatgggactgaagaacctaaggaggaaataagtagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcaggtccattcgttctatactgttaaatttcggagatttgacgaccctaaactgaaagccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26554" stop="29374"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26854" g_stop="27012" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="159" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28717" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="160" r_stop="557" r_length="398" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="29074" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="558" r_stop="579" r_length="22" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E247537" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>579</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E247537" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26854" e_stop="27012"/>
          <exon e_start="28320" e_stop="28717"/>
          <exon e_start="29053" e_stop="29074"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAACTGAAGAGATCTGAAGAGGGGTCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTG</genome_strand>
        <mrna_strand>AAAAAACTGAAGAGATCTGAAGAGGGGTCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E720534" ref_strand="+" ref_description="SGN-E720534 [FC11AD07]">
      <seq>gggcgattggcggccaatcggccgaattgagagatctgaagaggggtctgactagtttcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagggaggagtaacagtcttttctctaaatctctgcatttagtttttgctgtactcagatcagggacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaactgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattacggagccaataaaattcggctctcatgggactgaagaacctaaggaggaaataagtagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcaggtccattcgttctatactgttaaatttcggagatttgacgaccctaaactgaaatccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattgaacaaaggaaagccctcagtgctgagaataaggaatttcggagtgctattgatggtaagataaaggaaatggcacctctgcatgaggctttgggccagctccgcggttctaggaatgcaggccgagagaggggtcctacagtgtgttcatctgaggaggagctcaatcatcttatcaagggtctgcaataccgcattcagcatgaaagcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26558" stop="29707"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26866" g_stop="27012" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="178" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28717" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="576" r_length="398" r_score="0.997"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="29247" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="577" r_stop="771" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29370" g_stop="29407" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="772" r_stop="809" r_length="38" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E720534" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>778</cumulative_length_of_scored_exons>
        <coverage percentage="0.962" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E720534" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26866" e_stop="27012"/>
          <exon e_start="28320" e_stop="28717"/>
          <exon e_start="29053" e_stop="29247"/>
          <exon e_start="29370" e_stop="29407"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATCTGAAGAGGGGTCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCAT</genome_strand>
        <mrna_strand>AGATCTGAAGAGGGGTCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAATCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT..........................................................................................................................ATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E725149" ref_strand="+" ref_description="SGN-E725149 [FC26AH09]">
      <seq>atcggccgaattggatctgaagaggggcctgactagtttcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagggaggagtaacagtcttttctctaaatctctgcatttagtttttgctgtactcagatcagggacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaactgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattacggagccaataaaattcggctctcatgggactgaagaacctaaggaggaaataagtagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcaggtccattcgttctatactgttaaatttcggagatttgacgaccctaaactgaaagccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattgaacaaaggaaagccctcagtgctgagaataaggaatttcggagtgctattgatggtaagataaaggaaatggcacctctgcatgaggctttgggccagctccgcggttctaggaatgcaggccgagagaggggtcctacagtgtgttcatctgaggaggagctcaatcatcttatcaagggtctgcaataccgcattcagca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26567" stop="29698"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26868" g_stop="27012" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="15" r_stop="159" r_length="145" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28717" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="160" r_stop="557" r_length="398" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="29247" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="558" r_stop="752" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29370" g_stop="29398" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="753" r_stop="781" r_length="29" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E725149" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>767</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E725149" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26868" e_stop="27012"/>
          <exon e_start="28320" e_stop="28717"/>
          <exon e_start="29053" e_stop="29247"/>
          <exon e_start="29370" e_stop="29398"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTGAAGAGGGGTCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCA</genome_strand>
        <mrna_strand>ATCTGAAGAGGGGCCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT..........................................................................................................................ATCAAGGGTCTGCAATACCGCATTCAGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E579484" ref_strand="+" ref_description="SGN-E579484 [86613]">
      <seq>atcggcacgaggctgactagtttcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagggaggggtaacagtcttttctctaaatctttgcattttgtttttgctatactcagatcaggcacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaagtgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattactgagccaataaaattcggctctcatgggactgaagaacctaagaaggaggaagtaagcagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcagatccattcgttctatactgttaaatttcggagatttgacgacccaaaactgaaggccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaaatcaattttcattgaaccaaaggaaagccct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26577" stop="29390"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26868" g_stop="27012" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="143" r_length="143" r_score="0.931"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="0.92"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28717" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="544" r_length="401" r_score="0.965"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.89"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="29090" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="545" r_stop="584" r_length="40" r_score="0.895"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E579484" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>581</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E579484" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26868" e_stop="27012"/>
          <exon e_start="28320" e_stop="28717"/>
          <exon e_start="29053" e_stop="29090"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTGAAGAGGGGTCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCT---AAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTG-AAAAATCAATTTTCATTGAA-CAAAGGAAAGCCCT</genome_strand>
        <mrna_strand>ATCGGCA-CGAGG-CTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGGGTAACAGTCTTTTCTCTAAATCTTTGCATTTTGTTTTTGCTATACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGCACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAAGTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACTGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGAAGGAGGAAGTAAGCAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGATCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCAAAACTGAAGGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAAATCAATTTTCATTGAACCAAAGGAAAGCCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E467454" ref_strand="+" ref_description="SGN-E467454 [cSTB-49-C15]">
      <seq>ctgaagaggggtctgactagtttcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagcgaggggatcaggcacttcttggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaagtgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattactgagccaataaaattcggctctcatgggactgaagaacctaagaaggaggaagtaagcagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcagatccattcgttctatactgttaaatttcggagatttgacgacccaaaactgaaggccagaattgaactggctgaaaaagaactacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattgaacaaaggaaagccctcagtgctgagaataaggaattttggagtgctattgatggtaagataaaggaaatggtacctctgcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26570" stop="29458"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26870" g_stop="26964" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="95" r_length="95" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26965" i_stop="28319" i_length="1355">
            <donor d_prob="0.824" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28717" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="96" r_stop="496" r_length="401" r_score="0.960"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="29158" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="497" r_stop="602" r_length="106" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E467454" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>599</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E467454" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26870" e_stop="26964"/>
          <exon e_start="28320" e_stop="28717"/>
          <exon e_start="29053" e_stop="29158"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGAAGAGGGGTCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCT---AAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATG</genome_strand>
        <mrna_strand>CTGAAGAGGGGTCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGCGAGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGCACTTCTTGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAAGTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACTGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGAAGGAGGAAGTAAGCAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGATCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCAAAACTGAAGGCCAGAATTGAACTGGCTGAAAAAGAACTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTTGGAGTGCTATTGATGGTAAGATAAAGGAAATGGTACCTCTGCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E252774" ref_strand="+" ref_description="SGN-E252774 [cLEG-16-H12]">
      <seq>tgaagaggggtctgactagtttcttctctcaaaaaatctctcttttgaacggccctccctaatgttttgtcaaaaagggtataatagagggaggagtaacagtcttttctctaaatctctgcatttagtttttgctgtactcagatcagggacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaactgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattacggagccaataaaattcggctctcatgggactgaagaacctaaggaggaaataagtagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcaggtccattcgttctatactgttaaatttcggagatttgacgaccctaaactgaaagccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26571" stop="29021"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26871" g_stop="27012" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="143" r_length="143" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28717" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="541" r_length="398" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E252774" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>540</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E252774" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26871" e_stop="27012"/>
          <exon e_start="28320" e_stop="28717"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAGAGGGGTCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAAT-TTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG</genome_strand>
        <mrna_strand>TGAAGAGGGGTCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATGTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E456861" ref_strand="+" ref_description="SGN-E456861 [cSTS-30-D18]">
      <seq>gaagaggggtctgactagtttcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagcgaggggatcaggcacttcttggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaagtgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattactgagccaataaaattcggctctcatgggactgaagaacctaagaaggaggaagtaagcagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcagatccattcgttctatactgttaaatttcggagatttgacgacccaaaactgaaggccagaattgaactggctgaaaaagaactacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattgaacaaaagaaagccctca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26572" stop="29392"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26872" g_stop="26964" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="93" r_length="93" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26965" i_stop="28319" i_length="1355">
            <donor d_prob="0.824" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28717" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="94" r_stop="494" r_length="401" r_score="0.960"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="29092" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="495" r_stop="534" r_length="40" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E456861" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>531</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E456861" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26872" e_stop="26964"/>
          <exon e_start="28320" e_stop="28717"/>
          <exon e_start="29053" e_stop="29092"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGAGGGGTCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCT---AAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCA</genome_strand>
        <mrna_strand>GAAGAGGGGTCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGCGAGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGCACTTCTTGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAAGTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACTGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGAAGGAGGAAGTAAGCAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGATCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCAAAACTGAAGGCCAGAATTGAACTGGCTGAAAAAGAACTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAAGAAAGCCCTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E442778" ref_strand="+" ref_description="SGN-E442778 [cSTA-34-N14]">
      <seq>gaagaggggtctgactagtttcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagggaggggtaacagtcttttctctaaatctttgcattttgtttttgctatactcagatcaggcacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaagtgaacagatcaatcttctgaaagaaaatggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26572" stop="28739"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26872" g_stop="27012" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="141" r_length="141" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="0.92"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28439" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="142" r_stop="261" r_length="120" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E442778" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>261</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E442778" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26872" e_stop="27012"/>
          <exon e_start="28320" e_stop="28439"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGAGGGGTCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAA</genome_strand>
        <mrna_strand>GAAGAGGGGTCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGGGTAACAGTCTTTTCTCTAAATCTTTGCATTTTGTTTTTGCTATACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGCACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAAGTGAACAGATCAATCTTCTGAAAGAAAATGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E297039" ref_strand="+" ref_description="SGN-E297039 [cLEW-7-H3]">
      <seq>gggtctgactagtttcttctatcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagggaggagtaacagtcttttctctaaatctttgcatttagtttttgctgtactcagatcagggacttctcggtttgtattttattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaactgaacagatcaatcttctgaaagaaaatggaaagccatatcatgtttcaaggattaccgggccaataaaattttgttctcatgggactgaagaacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26578" stop="28804"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26878" g_stop="27012" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="135" r_length="135" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28504" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="136" r_stop="320" r_length="185" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E297039" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>320</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E297039" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26878" e_stop="27012"/>
          <exon e_start="28320" e_stop="28504"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGTCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCT</genome_strand>
        <mrna_strand>GGGTCTGACTAGTTTCTTCTATCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTTTGCATTTAGTTTTTGCTGTACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGGACTTCTCGGTTTGTATTTTATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCATATCATGTTTCAAGGATTACCGGGCCAATAAAATTTTGTTCTCATGGGACTGAAGAACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E585830" ref_strand="+" ref_description="SGN-E585830 [68294]">
      <seq>tgttgactagtttcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagggaggggtaacagtcttttctctaaatctttgcattttgtttttgctatactcagatcaggcacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaagtgaacagatcaatcttctgaaagaaaatggaaagcccgaatcatgtttcagggattactgagccaaataaaattcggctctcatgggactgaagaacctaagaaggaggaagtaagcagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcagatccattcgttctatactgttaaatttcggagatttgacgacccaaaactgaaggccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattgaacaaaggaaagccctcagtgctgagaataaggaattttggagtgctattgatggtacgataaaggaaatggtacctctgcatgaggccctgggccagctccgcggttctaggaatgcaggccgagagaggggtcctacagtgtgtcatctgaggaggagctcaatcatcttattaagggtctgcagtaccgcattcaggcatgaaagcattcctctgaacggaagagaagcaaattcttcggggaaatcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26580" stop="29746"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26879" g_stop="27012" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="133" r_length="133" r_score="0.955"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="0.92"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28717" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="134" r_stop="536" r_length="403" r_score="0.955"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="29247" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="537" r_stop="730" r_length="194" r_score="0.969"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29370" g_stop="29446" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="731" r_stop="810" r_length="80" r_score="0.896"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E585830" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>804</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E585830" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26879" e_stop="27012"/>
          <exon e_start="28320" e_stop="28717"/>
          <exon e_start="29053" e_stop="29247"/>
          <exon e_start="29370" e_stop="29446"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAG-CCGAATCATGTTTCAGGGATTACGGAGCC-AATAAAATTCGGCTCTCATGGGACTGAAGAACCT---AAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCA-GCATGAAAGCATTCCTCTGAAC-GAAGAGAAGCAAATTCTTC-GGGAAATCAA</genome_strand>
        <mrna_strand>TGT-TGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGGGTAACAGTCTTTTCTCTAAATCTTTGCATTTTGTTTTTGCTATACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGCACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAAGTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCCGAATCATGTTTCAGGGATTACTGAGCCAAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGAAGGAGGAAGTAAGCAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGATCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCAAAACTGAAGGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTTGGAGTGCTATTGATGGTACGATAAAGGAAATGGTACCTCTGCATGAGGCCCTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTG-TCATCTGAGGAGGAGCTCAATCATCTT..........................................................................................................................ATTAAGGGTCTGCAGTACCGCATTCAGGCATGAAAGCATTCCTCTGAACGGAAGAGAAGCAAATTCTTCGGGGAAATCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E478040" ref_strand="+" ref_description="SGN-E478040 [cSTD-2-H22]">
      <seq>ggtctgactagtttcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagggaggggatcaggcacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaagtgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattactgagccaataaaattcggctctcatgggactgaagaacctaagaaggaggaagtaagcagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcagatccattcgttctatactgttaaatttcggagatttgacgacccaaaactgaaggccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattgaacaaaggaaagccctcagtgctgagaataaggaattttggagtgctattgatggtaagataaaggaaatggtacctctgcatgaagccctgggccagctncgcggttctaggaatgcaggccgagagaggggtcctacagtgtgttcatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26579" stop="29526"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26879" g_stop="26964" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="86" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26965" i_stop="28319" i_length="1355">
            <donor d_prob="0.824" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28717" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="87" r_stop="487" r_length="401" r_score="0.965"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="29226" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="488" r_stop="661" r_length="174" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E478040" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>658</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E478040" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26879" e_stop="26964"/>
          <exon e_start="28320" e_stop="28717"/>
          <exon e_start="29053" e_stop="29226"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCT---AAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCT</genome_strand>
        <mrna_strand>GGTCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGCACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAAGTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACTGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGAAGGAGGAAGTAAGCAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGATCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCAAAACTGAAGGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTTGGAGTGCTATTGATGGTAAGATAAAGGAAATGGTACCTCTGCATGAAGCCCTGGGCCAGCTNCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E589144" ref_strand="+" ref_description="SGN-E589144 [42712]">
      <seq>gtctgactagtttcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagggaggggtaacagtcttttctctaaatctttgcattttgtttttgctatactcagatcaggcacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaagtgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattactgagccaataaaattcggctctcatgggactgaagaacctaagaaggaggaagtaagcagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcagatccattcgttctatactgttaaatttcggagatttgacgacccaaaactgaaggccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattgaacaaaggaaagccctcagtgctgagaataaggaattttggagtgctattgatggtaagataaaggaaatggtacctctgcatgaggccctgggccagctccgcggttctaggaatgcaggccgagagaggggtcctacagtgtgttcatctgaggaggagctcaatcatcttattaagggtctgcagtaccgcattcagcatgaaagcattcctctgaacgaagag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26580" stop="29723"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26880" g_stop="27012" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="133" r_length="133" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="0.92"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28717" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="134" r_stop="534" r_length="401" r_score="0.965"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="29247" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="535" r_stop="729" r_length="195" r_score="0.979"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29370" g_stop="29423" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="730" r_stop="783" r_length="54" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E589144" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>780</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E589144" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26880" e_stop="27012"/>
          <exon e_start="28320" e_stop="28717"/>
          <exon e_start="29053" e_stop="29247"/>
          <exon e_start="29370" e_stop="29423"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCT---AAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAG</genome_strand>
        <mrna_strand>GTCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGGGTAACAGTCTTTTCTCTAAATCTTTGCATTTTGTTTTTGCTATACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGCACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAAGTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACTGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGAAGGAGGAAGTAAGCAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGATCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCAAAACTGAAGGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTTGGAGTGCTATTGATGGTAAGATAAAGGAAATGGTACCTCTGCATGAGGCCCTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT..........................................................................................................................ATTAAGGGTCTGCAGTACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E583472" ref_strand="+" ref_description="SGN-E583472 [9293]">
      <seq>gtctgactagtttcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagggaggggtaacagtcttttctctaaatctttgcattttgttgtttgctatactcagatcaggcacttctcggtttgtatttcattgaaatatgggtgtaaaggtggaagctaagttagttcatgttccagttgaagctggaagtgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattactgagccaataaaattcggctctcatgggactgaagaacctaagaaggaggaagtaagcagaattcctgtgagcaatgttccaacaggatgcggttgaggattggcctgaacctaagcagatccattcgttctatactgttaaatttcggagatttgacgacccaaaactgaaggccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcagttctccattgaacaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26580" stop="29021"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26880" g_stop="27012" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="134" r_length="134" r_score="0.955"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="0.88"/>
            <acceptor a_prob="0.989" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28717" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="135" r_stop="536" r_length="402" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E583472" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>531</cumulative_length_of_scored_exons>
        <coverage percentage="0.940" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E583472" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26880" e_stop="27012"/>
          <exon e_start="28320" e_stop="28717"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTT-TTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCT---AAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAA-AGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG</genome_strand>
        <mrna_strand>GTCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGGGTAACAGTCTTTTCTCTAAATCTTTGCATTTTGTTGTTTGCTATACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGCACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAAAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAAGTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACTGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGAAGGAGGAAGTAAGCAGAATTCCTGTGAGCAATGTTCCAACAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGATCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCAAAACTGAAGGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E581815" ref_strand="+" ref_description="SGN-E581815 [7444]">
      <seq>gcacgaggagtttcttctctcaaaaaatctctcttttgaacggcctccctaatttttgtcaaaaagggtataatagagggaggggtaacagtcttttctctaaatctttgcatatttgtatccatgctatactcagatcaggcacttctcggtttgtatttcattgaaatatgggtgtacaggtggaagctaagttagttcatgttccagttgaagctggaagtgaacagatcaatcttctgaaagaaaatggcaaagccgaatcatgtttcaggggattactgagccaataaaattcggctctcatgggactgaagaacctaagaaggaggaagtaagcagaattcctgtgagcaatgttcctacaaggatgcggttgaggattggcctgaacctaagcagatccattcgttctatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26584" stop="28897"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26880" g_stop="27012" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="135" r_length="135" r_score="0.865"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="0.77"/>
            <acceptor a_prob="0.989" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28597" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="136" r_stop="420" r_length="285" r_score="0.924"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E581815" ref_strand="+">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>411</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E581815" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26880" e_stop="27012"/>
          <exon e_start="28320" e_stop="28597"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCAT-TTAGT-T-TTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGG-AAAGCCGAATCATGTTTCA-GGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCT---AAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCC-A-AAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACT</genome_strand>
        <mrna_strand>GCACGAGGAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGG-CCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGGGTAACAGTCTTTTCTCTAAATCTTTGCATATTTGTATCCATGCTATACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGCACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTACAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAAGTGAACAGATCAATCTTCTGAAAGAAAATGGCAAAGCCGAATCATGTTTCAGGGGATTACTGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGAAGGAGGAAGTAAGCAGAATTCCTGTGAGCAATGTTCCTACAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGATCCATTCGTTCTATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E204432" ref_strand="+" ref_description="SGN-E204432 [cLEC-13-J12]">
      <seq>tctgactagtttcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagggaggagtaacagtcttttctctaaatctctgcatttagtttttgctgtactcagatcagggacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaactgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattacggagccaataaaattcggctctcatgggactgaagaacctaaggaggaaataagtagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcaggtccattcgttctatactgttaaatttcggagatttgacgaccctaaactgaaagccagaattgaactggctgaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26581" stop="28955"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26881" g_stop="27012" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="132" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28655" g_length="336"/>
          <reference_exon_boundary r_type="cDNA" r_start="133" r_stop="468" r_length="336" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E204432" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>468</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E204432" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26881" e_stop="27012"/>
          <exon e_start="28320" e_stop="28655"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAA</genome_strand>
        <mrna_strand>TCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E333133" ref_strand="+" ref_description="SGN-E333133 [cTOD-19-P19]">
      <seq>tctgactagtttcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagggaggagtaacagtcttttctctaaatctctgcatttagtttttgctgtactcagatcagggacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaactgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattacggagccaataaaattcggctctcatgggactgaagaacctaaggaggaaataagtagaattcctgtgagcaatgttccaaaggatgcggttgaagattggcctgaacctaagcagggccattcgttctatactgttaaatttcggagatttgacgaccctaaactgaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26581" stop="28933"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26881" g_stop="27012" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="132" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28633" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="133" r_stop="446" r_length="314" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E333133" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>446</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E333133" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26881" e_stop="27012"/>
          <exon e_start="28320" e_stop="28633"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAA</genome_strand>
        <mrna_strand>TCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAAGATTGGCCTGAACCTAAGCAGGGCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E338151" ref_strand="+" ref_description="SGN-E338151 [cTOE-13-H15]">
      <seq>tctgactagtttcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagggaggagtaacagtcttttctctaaatctctgcatttagtttttgctgtactcagatcagggacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaactgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattacggagccaataaaattcggctctcatgggactgaagaacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26581" stop="28803"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26881" g_stop="27012" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="132" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28503" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="133" r_stop="316" r_length="184" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E338151" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>316</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E338151" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26881" e_stop="27012"/>
          <exon e_start="28320" e_stop="28503"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACC</genome_strand>
        <mrna_strand>TCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E211125" ref_strand="+" ref_description="SGN-E211125 [cLEC-69-J22]">
      <seq>ctgactagtttcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagggaggagtaacagtcttttctctaaatctctgcatttagtttttgctgtactcagatcagggacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaactgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattacggagccaataaaattcggctctcatgggactgaagaacctaaggaggaaataagtagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcaggtccattcgttctatactgttaaatttcggagatttgacgaccctaaactgaaagccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattgaacaaaggaaagccctcagtgctgagaataaggaatttcggagtgctattgatggtaagataaaggaaatggcacctctgcatgaggctttgggccagctccgcggttctaggaatgcangccgagagaagggtcctacagtgtgttcatctgaggaggagctncatcatcttatcaagggtctgcaataccgcattcagcatgaaagcattcctctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26582" stop="29715"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26882" g_stop="27012" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="131" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28717" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="132" r_stop="529" r_length="398" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="29247" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="530" r_stop="724" r_length="195" r_score="0.979"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="0.94"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29370" g_stop="29415" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="725" r_stop="770" r_length="46" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E211125" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>770</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E211125" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26882" e_stop="27012"/>
          <exon e_start="28320" e_stop="28717"/>
          <exon e_start="29053" e_stop="29247"/>
          <exon e_start="29370" e_stop="29415"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGA</genome_strand>
        <mrna_strand>CTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCANGCCGAGAGAAGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTNCATCATCTT..........................................................................................................................ATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E484427" ref_strand="+" ref_description="SGN-E484427 [cSTE-13-G2]">
      <seq>ctgactagtttcttctctcaaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagggaggggtaacagtcttttctctaaatctttgcattttgtttttgctatactcagatcaggcactntctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaagtgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattactgagccaataaaattcggctctcatgggactgaagaacctaagaaggaggaagttagcagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcagatccattcgttctatactgttaaatttcggagatttgacgacccaaaactgaaggccagaattgaactggctgaaaaagagctacagaaaaaagaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattgaacaaaagaaagccctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26582" stop="29391"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26882" g_stop="27012" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="132" r_length="132" r_score="0.954"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="0.92"/>
            <acceptor a_prob="0.989" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28717" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="133" r_stop="534" r_length="402" r_score="0.952"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="29091" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="535" r_stop="573" r_length="39" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E484427" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>568</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E484427" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26882" e_stop="27012"/>
          <exon e_start="28320" e_stop="28717"/>
          <exon e_start="29053" e_stop="29091"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGACTAGTTTCTTCTCTC-AAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACT-TCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCT---AAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTC</genome_strand>
        <mrna_strand>CTGACTAGTTTCTTCTCTCAAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGGGTAACAGTCTTTTCTCTAAATCTTTGCATTTTGTTTTTGCTATACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGCACTNTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAAGTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACTGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGAAGGAGGAAGTTAGCAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGATCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCAAAACTGAAGGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAAGACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAAGAAAGCCCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E277855" ref_strand="-" ref_description="SGN-E277855 [cLEL-5-M4](-)">
      <seq>gcacgaggtttcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagggacgagtaacagtcttttctctaaatctctgcatttagtttttgctgtactcagatcagggacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaactgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattacggagccaataaaattcggctctcatgggactgaagaacctaaggaggaaataagtagaattcctgtgagcaatgttccaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26583" stop="28845"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26883" g_stop="27012" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="131" r_length="131" r_score="0.954"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28545" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="132" r_stop="357" r_length="226" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E277855" ref_strand="-">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>356</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E277855" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="26883" e_stop="27012"/>
          <exon e_start="28320" e_stop="28545"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGACTA-GTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAA</genome_strand>
        <mrna_strand>GCACGAGGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGACGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E707903" ref_strand="+" ref_description="SGN-E707903 [FA34BB09]">
      <seq>ctattttcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagggaggagtaacagtcttttctctaaatctctgcatttagtttttgctgtactcagatcagggacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaactgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattacggagccaataaaattcggctctcatgggactgaagaacctaaggaggaaataagtagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcaggtccattcgttctatactgttaaatttcggagatttgacgaccctaaactgaaagccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattgaacaaaggaaagccctcagtgctgagaataaggaatttcggagtgctattgatggtaagataaaggaaatggcacctctgcatgaggctttgggccagctccgcggttctaggaatgcaggccgagagaggggtcctacagtgtgttcatctgaggaggagctcaatcatcttatcaagggtctgcaataccgcattcagcatgaaagcattcctctgaacgaagagaagcaaattcttcgggaaatcaaacaacttgaaggaacaagggaagatgttaaaaaggttgctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26586" stop="29788"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26886" g_stop="27012" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="127" r_length="127" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28717" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="128" r_stop="525" r_length="398" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="29247" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="526" r_stop="720" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29370" g_stop="29488" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="721" r_stop="839" r_length="119" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E707903" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>839</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E707903" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26886" e_stop="27012"/>
          <exon e_start="28320" e_stop="28717"/>
          <exon e_start="29053" e_stop="29247"/>
          <exon e_start="29370" e_stop="29488"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGC</genome_strand>
        <mrna_strand>CTATTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT..........................................................................................................................ATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E603662" ref_strand="+" ref_description="SGN-E603662 [56756]">
      <seq>ctagttcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagggaggggtaacagtcttttctctaaatctttgcattttgtttttgctatactcagatcaggcacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaagtgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattactgagccaataaaattcggctctcatgggactgaagaacctaagaaggaggaagtaagcagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcagatccattcgttctatactgttaaatttcggagatttgacgacccaaaactgaaggccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattgaacaaaggaaagccctcagtgctgagaataaggaattttggagtgctattgatggtaagataaaggaaatggtacctctgcatgaggccctgggccagctcccggttctaggaatgcaggccgagagaggggtcctacagtgtgttcatctgaggaggagctcaatcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26586" stop="29544"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26886" g_stop="27012" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="126" r_length="126" r_score="0.961"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="0.92"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28717" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="127" r_stop="527" r_length="401" r_score="0.965"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="29244" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="528" r_stop="718" r_length="191" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E603662" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>717</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E603662" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26886" e_stop="27012"/>
          <exon e_start="28320" e_stop="28717"/>
          <exon e_start="29053" e_stop="29244"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCT---AAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCAT</genome_strand>
        <mrna_strand>CTAGT-TCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGGGTAACAGTCTTTTCTCTAAATCTTTGCATTTTGTTTTTGCTATACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGCACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAAGTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACTGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGAAGGAGGAAGTAAGCAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGATCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCAAAACTGAAGGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTTGGAGTGCTATTGATGGTAAGATAAAGGAAATGGTACCTCTGCATGAGGCCCTGGGCCAGCTCC-CGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E419790" ref_strand="+" ref_description="SGN-E419790 [STM-30-A2]">
      <seq>ctagtttcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagggaggggtaacagtcttttctctaaatctttgcattttgtttttgctatactcagatcaggcacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaagtgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattactgagccaataaaattcggctctcatgggactgaagaacctaagaaggaggaagtaagcagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcagatccattcgttctatactgttaaatttcggagatttgacgacccaaaactgaaggccagaattgaactggctgaaaaagagttacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattgaacaaaggaaagccctcagtgctgagaataaggaattttggagtgctattgatggtaagataaaggaaatggtacctctgcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26586" stop="29457"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26886" g_stop="27012" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="127" r_length="127" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="0.92"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28717" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="128" r_stop="528" r_length="401" r_score="0.962"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="29157" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="529" r_stop="633" r_length="105" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E419790" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>630</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E419790" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26886" e_stop="27012"/>
          <exon e_start="28320" e_stop="28717"/>
          <exon e_start="29053" e_stop="29157"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCT---AAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCAT</genome_strand>
        <mrna_strand>CTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGGGTAACAGTCTTTTCTCTAAATCTTTGCATTTTGTTTTTGCTATACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGCACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAAGTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACTGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGAAGGAGGAAGTAAGCAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGATCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCAAAACTGAAGGCCAGAATTGAACTGGCTGAAAAAGAGTTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTTGGAGTGCTATTGATGGTAAGATAAAGGAAATGGTACCTCTGCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E203231" ref_strand="+" ref_description="SGN-E203231 [cLEB-3-A17]">
      <seq>gcacgagcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagggaggagtaacagtcttttctctaaatctctgcatttagtttttgctgtactcagatcagggacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaactgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattacggagccaataaaattcggctctcatgggactgaagaacctaaggaggaaataagtagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcaggtccattcgttctatactgttaaatttcggagatttgacgaccctaaactgaaagccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattgaacaaaggaaagccctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26593" stop="29391"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26886" g_stop="27012" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="127" r_length="127" r_score="0.953"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28717" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="128" r_stop="525" r_length="398" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="29091" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="526" r_stop="564" r_length="39" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E203231" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>564</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E203231" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26886" e_stop="27012"/>
          <exon e_start="28320" e_stop="28717"/>
          <exon e_start="29053" e_stop="29091"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTC</genome_strand>
        <mrna_strand>GCACGAGCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E478465" ref_strand="+" ref_description="SGN-E478465 [cSTD-5-E13]">
      <seq>ctagtttcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagggaggggtaacagtcttttctctaaatctttgcattttgtttttgctatactcagatcaggcacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaagtgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattactgagccaataaaattcggctctcatgggactgaagaacctaagaaggaggaagtaagcagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcagatccattcgttctatactgttaaatttcggagatttgacgacccaaaactgaaggccagaattgaactggcttgaaaagagctacagaaaaagaaccaacctagatctcagatcattgaaaaattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26586" stop="29005"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26886" g_stop="27012" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="127" r_length="127" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="0.92"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28705" g_length="386"/>
          <reference_exon_boundary r_type="cDNA" r_start="128" r_stop="516" r_length="389" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E478465" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>513</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E478465" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26886" e_stop="27012"/>
          <exon e_start="28320" e_stop="28705"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCT---AAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTG</genome_strand>
        <mrna_strand>CTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGGGTAACAGTCTTTTCTCTAAATCTTTGCATTTTGTTTTTGCTATACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGCACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAAGTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACTGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGAAGGAGGAAGTAAGCAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGATCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCAAAACTGAAGGCCAGAATTGAACTGGCTTGAAAAGAGCTACAGAAAAAGAACCAACCTAGATCTCAGATCATTGAAAAATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E444893" ref_strand="+" ref_description="SGN-E444893 [cSTA-44-A20]">
      <seq>ctagtttcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagggaggggtaacagtcttttctctaaatctttgcattttgtttttgctatactcagatcaggcacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaagtgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattactgagccaataaaattcggctctcatgggactgaagaacctaagaaggaggaagtaagcagaattcctgtgagcaatgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26586" stop="28840"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26886" g_stop="27012" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="127" r_length="127" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="0.92"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28540" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="128" r_stop="351" r_length="224" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E444893" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>348</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E444893" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26886" e_stop="27012"/>
          <exon e_start="28320" e_stop="28540"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCT---AAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTT</genome_strand>
        <mrna_strand>CTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGGGTAACAGTCTTTTCTCTAAATCTTTGCATTTTGTTTTTGCTATACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGCACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAAGTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACTGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGAAGGAGGAAGTAAGCAGAATTCCTGTGAGCAATGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E704502" ref_strand="+" ref_description="SGN-E704502 [FA24BH07]">
      <seq>tagtttcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagggaggagtaacagtcttttctctaaatctctgcatttagtttttgctgtactcagatcagggacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaactgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattacggagccaataaaattcggctctcatgggactgaagaacctaaggaggaaataagtagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcaggtccattcgttctatactgttaaatttcggagatttgacgaccctaaactgaaagccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattgaacaaaggaaagccctcagtgctgagaataaggaatttcggagtgctattgatggtaagataaaggaaatggcacctctgcatgaggctttgggccagctccgcggttctaggaatgcaggccgagagaggggtcctacagtgtgttcatctgaggaggagctcaatcatcttatcaagggtctgcaataccgcattcagcatgaaagcattcctctgaacgaagagaagcaaattcttcgggaaatcaaacaacttgaaggaacaagggaagatgttaaaaaggttgctgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26587" stop="29789"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26887" g_stop="27012" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="126" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28717" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="127" r_stop="524" r_length="398" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="29247" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="525" r_stop="719" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29370" g_stop="29489" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="720" r_stop="839" r_length="120" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E704502" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>839</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E704502" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26887" e_stop="27012"/>
          <exon e_start="28320" e_stop="28717"/>
          <exon e_start="29053" e_stop="29247"/>
          <exon e_start="29370" e_stop="29489"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCT</genome_strand>
        <mrna_strand>TAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT..........................................................................................................................ATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E704719" ref_strand="+" ref_description="SGN-E704719 [FA25AC09]">
      <seq>tattttcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagggaggagtaacagtcttttctctaaatctctgcatttagtttttgctgtactcagatcagggacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaactgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattacggagccaataaaattcggctctcatgggactgaagaacctaaggaggaaataagtagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcaggtccattcgttctatactgttaaatttcggagatttgacgaccctaaactgaaagccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattgaacaaaggaaagccctcagtgctgagaataaggaatttcggagtgctattgatggtaaaataaaggaaatggcacctctgcatgaggctttgggccagctccgcggttctaggaatgcaggccgagagaggggtcctacagtgtgttcatctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26587" stop="29527"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26887" g_stop="27012" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="126" r_length="126" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28717" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="127" r_stop="524" r_length="398" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="29227" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="525" r_stop="699" r_length="175" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E704719" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>699</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E704719" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26887" e_stop="27012"/>
          <exon e_start="28320" e_stop="28717"/>
          <exon e_start="29053" e_stop="29227"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTG</genome_strand>
        <mrna_strand>TATTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAAATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E327940" ref_strand="+" ref_description="SGN-E327940 [cTOC-22-J15]">
      <seq>tagtttcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagggaggagtaacagtcttttctctaaatctctgcatttagtttttgctgtactcagatcagggacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaactgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattacggagccaataaaattcggctctcatgggactgaagaacctaaggaggaaataagtagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcaggtccattcgttctatactgttaaatttcggagatttgacgaccctaaactgaaagccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattgaacaaaggaaagccctcagtgctgagaataaggaatttcggagtgctattgatggtaaaagataaggaatggcacctctgcatgaggctttgggcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26587" stop="29470"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26887" g_stop="27012" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="126" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28717" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="127" r_stop="524" r_length="398" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="29170" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="525" r_stop="642" r_length="118" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E327940" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>642</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E327940" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26887" e_stop="27012"/>
          <exon e_start="28320" e_stop="28717"/>
          <exon e_start="29053" e_stop="29170"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCC</genome_strand>
        <mrna_strand>TAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAAAGATAAGGAATGGCACCTCTGCATGAGGCTTTGGGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E314173" ref_strand="+" ref_description="SGN-E314173 [cTOA-21-H23]">
      <seq>tagtttcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagggaggagtaacagtcttttctctaaatctctgcatttagtttttgctgtactcagatcagggacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaactgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattacggagccaataaaattcggctctcatgggactgaagaacctaaggaggaaataagtagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcaggtccattcgttctatactgttaaatttcggagatttgacgaccctaaactgaaagccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattgaacaaaggaaaagccctcagtgctgagaataaggaatttcggagtgctattgatggtaagataaaggaaatggcacctctgcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26587" stop="29458"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26887" g_stop="27012" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="126" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28717" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="127" r_stop="524" r_length="398" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="29158" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="525" r_stop="631" r_length="107" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E314173" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>630</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E314173" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26887" e_stop="27012"/>
          <exon e_start="28320" e_stop="28717"/>
          <exon e_start="29053" e_stop="29158"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGG-AAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATG</genome_strand>
        <mrna_strand>TAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAGGAAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E324814" ref_strand="+" ref_description="SGN-E324814 [cTOC-8-J14]">
      <seq>tagtttcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagggaggagtaacagtcttttctctaaatctctgcatttagtttttgctgtactcagatcagggacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaactgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattacggagccaataaaattcggctctcatgggactgaagaacctaaggaggaaataagtagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcaggtccattcgttctatactgttaaatttcggagatttgacgaccctaaactgaaagccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattgaacaaaggaaagccctcagtgctgagaataaggaatttcggagtgctattgatggtaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26587" stop="29433"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26887" g_stop="27012" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="126" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28717" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="127" r_stop="524" r_length="398" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="29133" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="525" r_stop="605" r_length="81" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E324814" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>605</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E324814" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26887" e_stop="27012"/>
          <exon e_start="28320" e_stop="28717"/>
          <exon e_start="29053" e_stop="29133"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAG</genome_strand>
        <mrna_strand>TAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E309881" ref_strand="+" ref_description="SGN-E309881 [cLEZ-10-E11]">
      <seq>tagtttcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagggaggagtaacagtcttttctctaaatctctgcatttagtttttgctgtactcagatcagggacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaactgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattacggagccaataaaattcggctctcatgggactgaagaacctaaagaggaaataagtagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcaggtccattcgttctatactgttaaatttcggagatttgacgaccctaaactgaaagccagaattgaactggctgaaaaagagctacagaaaaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26587" stop="28973"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26887" g_stop="27012" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="126" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28673" g_length="354"/>
          <reference_exon_boundary r_type="cDNA" r_start="127" r_stop="480" r_length="354" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E309881" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>480</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E309881" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26887" e_stop="27012"/>
          <exon e_start="28320" e_stop="28673"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGA</genome_strand>
        <mrna_strand>TAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAAGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E482336" ref_strand="+" ref_description="SGN-E482336 [cSTD-21-J22]">
      <seq>tagtatcttctctcaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagggaggggtaacagtcttttctctacatctttgcattttgtttttgctatactcagatcaggcacttctcggattgtatttcattgaaatatgggtgtagaagtggaagctacgttagttcatgttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26587" stop="28691"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26887" g_stop="27012" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="125" r_length="125" r_score="0.944"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="0.90"/>
            <acceptor a_prob="0.989" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28391" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="197" r_length="72" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E482336" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>198</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E482336" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26887" e_stop="27012"/>
          <exon e_start="28320" e_stop="28391"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTC</genome_strand>
        <mrna_strand>TAGTATCTTCTCTC-AAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGGGTAACAGTCTTTTCTCTACATCTTTGCATTTTGTTTTTGCTATACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGCACTTCTCGGATTGTATTTCATTGAAATATGGGTGTAGAAGTGGAAGCTACGTTAGTTCATGTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E332778" ref_strand="+" ref_description="SGN-E332778 [cTOD-18-D23]">
      <seq>gtttcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagggaggagtaacagtcttttctctaaatctctgcatttagtttttgctgtactcagatcagggacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaactgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattacggagccaataaaattcggctctcatgggactgaagaacctaaggaggaaataagtagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcaggtccattcgttctatactgttaaatttcggagatttgacgaccctaaactgaaagccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattgaacaaaggaaagccctcagtgctgagaataaggaatttcggagtgctattgatggtaagataaaggaaatggcacctctgcatgaggctttgggccagctccgcggttctaggaatgcaggccgagagaagggtcctacagtgtgttcatctgaagaggagctcaatcatcttatncagggtctgcaataccgcattcagcatngaagcattcctctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26589" stop="29715"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26889" g_stop="27012" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="124" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28717" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="522" r_length="398" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="29247" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="523" r_stop="717" r_length="195" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.991" a_score="0.91"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29370" g_stop="29415" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="718" r_stop="763" r_length="46" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E332778" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>763</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E332778" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26889" e_stop="27012"/>
          <exon e_start="28320" e_stop="28717"/>
          <exon e_start="29053" e_stop="29247"/>
          <exon e_start="29370" e_stop="29415"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGA</genome_strand>
        <mrna_strand>GTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAAGGGTCCTACAGTGTGTTCATCTGAAGAGGAGCTCAATCATCTT..........................................................................................................................ATNCAGGGTCTGCAATACCGCATTCAGCATNGAAGCATTCCTCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E399715" ref_strand="+" ref_description="SGN-E399715 [cSTC-2-M11]">
      <seq>gtttcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagggaggggtaacagtcttttctctaaatctttgcattttgtttttgctatactcagatcaggcacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaagtgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattactgagccaataaaattcggctctcatgggactgaagaacctaagaaggaggaagtaagcagaattcctgtgagcaatttccaaaggatgcggttgaggattggcctgaacctaagcagatccattcgttctatactgttaaatttcggagattttacgacccaaaactgaaggccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattgaacaaaggaaagccct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26589" stop="29390"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26889" g_stop="27012" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="124" r_length="124" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="0.92"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28717" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="524" r_length="400" r_score="0.960"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="29090" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="525" r_stop="562" r_length="38" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E399715" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>560</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E399715" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26889" e_stop="27012"/>
          <exon e_start="28320" e_stop="28717"/>
          <exon e_start="29053" e_stop="29090"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCT---AAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCT</genome_strand>
        <mrna_strand>GTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGGGTAACAGTCTTTTCTCTAAATCTTTGCATTTTGTTTTTGCTATACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGCACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAAGTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACTGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGAAGGAGGAAGTAAGCAGAATTCCTGTGAGCAAT-TTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGATCCATTCGTTCTATACTGTTAAATTTCGGAGATTTTACGACCCAAAACTGAAGGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E446531" ref_strand="+" ref_description="SGN-E446531 [cSTA-21-B22]">
      <seq>gtttcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagcgaggggatcaggcacttcttggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaagtgaacagatcaatcttctgaaagaaaatggaaagctgaatcatgtttcagggattactgagccaataaaattcggctctcatgggactgaagaacctaagaaggaggaagtaagcagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcagatccattcgttctatactgttaaatttcggagatttgacgacccaaaactgaaggccagaattgaactggctgaaaaggagctacagaaaaagaaccaagctagatctcagatcattgaaaaattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26589" stop="29005"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26889" g_stop="26964" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="76" r_length="76" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26965" i_stop="28319" i_length="1355">
            <donor d_prob="0.824" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28705" g_length="386"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="465" r_length="389" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E446531" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>462</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E446531" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26889" e_stop="26964"/>
          <exon e_start="28320" e_stop="28705"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCT---AAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTG</genome_strand>
        <mrna_strand>GTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGCGAGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGCACTTCTTGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAAGTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCTGAATCATGTTTCAGGGATTACTGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGAAGGAGGAAGTAAGCAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGATCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCAAAACTGAAGGCCAGAATTGAACTGGCTGAAAAGGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E482394" ref_strand="+" ref_description="SGN-E482394 [cSTD-22-E13]">
      <seq>gtttcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagcgaggggtaacagtcttttctctaaatctttgcattttgtttttgctatactcagatcaggcacttcttggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaagtgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcaggggattactgagccaataaaattcggctctcatgggactgaagaacctaagaaggaggaagtaagcagaattcctgtgagcaatgttccaaaggatgcgggtgaggattggcctgaacctaagcagatccattcgttctatactgttaaattttcggagatttgacgacccaaaactgaaggccagaattgaactggctngaaaagaactacagaaaaagaacccagctagatctcagatcattgaaaaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26589" stop="29004"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26889" g_stop="27012" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="124" r_length="124" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="0.92"/>
            <acceptor a_prob="0.989" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28704" g_length="385"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="514" r_length="390" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E482394" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>509</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E482394" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26889" e_stop="27012"/>
          <exon e_start="28320" e_stop="28704"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCA-GGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCT---AAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAA-TTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATT</genome_strand>
        <mrna_strand>GTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGCGAGGGGTAACAGTCTTTTCTCTAAATCTTTGCATTTTGTTTTTGCTATACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGCACTTCTTGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAAGTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGGATTACTGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGAAGGAGGAAGTAAGCAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGGTGAGGATTGGCCTGAACCTAAGCAGATCCATTCGTTCTATACTGTTAAATTTTCGGAGATTTGACGACCCAAAACTGAAGGCCAGAATTGAACTGGCTNGAAAAGAACTACAGAAAAAGAACCCAGCTAGATCTCAGATCATTGAAAAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E479224" ref_strand="+" ref_description="SGN-E479224 [cSTD-9-K21]">
      <seq>tttcttctctcaaaaaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagcgaggggtaacagtcttttctctaaatctttgcattttgtttttgctatactcagatcaggcacttcttggtttgtatttcattgaaatatgggtgtataggtggaagctaagttagttcatgttccagttgaagctggaagtgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattactgagccaataaaattcggctctcatgggactgaagaacctaataaggaggaagtaaccaaaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcagatccattcgttctatactgtgaaatttgggagatttgactacccaaaactgaaggccataattgaactggctgaaaaagaactacagaaaaagaaccaagctagatctcagatcattgaacaattgaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26590" stop="29008"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26890" g_stop="27012" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="0.92"/>
            <acceptor a_prob="0.989" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28708" g_length="389"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="515" r_length="392" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E479224" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>512</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E479224" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26890" e_stop="27012"/>
          <exon e_start="28320" e_stop="28708"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACC---TAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAG</genome_strand>
        <mrna_strand>TTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGCGAGGGGTAACAGTCTTTTCTCTAAATCTTTGCATTTTGTTTTTGCTATACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGCACTTCTTGGTTTGTATTTCATTGAAATATGGGTGTATAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAAGTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACTGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAATAAGGAGGAAGTAACCAAAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGATCCATTCGTTCTATACTGTGAAATTTGGGAGATTTGACTACCCAAAACTGAAGGCCATAATTGAACTGGCTGAAAAAGAACTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAACAATTGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E267783" ref_strand="+" ref_description="SGN-E267783 [cLEI-12-H14]">
      <seq>aaatctctcttttgaacggccctccctaatttttgtcaaaaagggtataatagagggaggagtaacagtcttttctctaaatctctgcatttagtttttgctgtactcaggacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccaattgaagctggaactgaacagatcaatcttctgaaagaaaatggaaagccgcatcatgtttcatggattacggagccaataaaattcggctctcatgggactgaagaacctatggaggaaataagtagaattcctgtgagcaatgttccaaaggatgcggctgacgattggcctgaacctaagcaggtccattcgttctatactggtaaatttcagagatttgacgaccctcaactgcaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26604" stop="28935"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26904" g_stop="27012" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="109" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28325" i_length="1313">
            <donor d_prob="0.932" d_score="1.00"/>
            <acceptor a_prob="0.841" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28326" g_stop="28635" g_length="310"/>
          <reference_exon_boundary r_type="cDNA" r_start="110" r_stop="419" r_length="310" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E267783" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>419</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E267783" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26904" e_stop="27012"/>
          <exon e_start="28326" e_stop="28635"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGC</genome_strand>
        <mrna_strand>AAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAATTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGCATCATGTTTCATGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTATGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGCTGACGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGGTAAATTTCAGAGATTTGACGACCCTCAACTGCAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E482035" ref_strand="+" ref_description="SGN-E482035 [cSTD-20-J1]">
      <seq>ttttgaacggccctccctaatttttgtcaaaagggtataatagagcgaggggtaacagtcttttctctaaatctttgcattttgtttttgctatactcagatcaggcacttcttggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaagtgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattactgagccaataaaattcggctctcatgggactgaagaacctaagaaggaggaagtaagcagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcagatccattcgttctatactgttaaatttcggagatttgacgacccaaaactgaaggccagaattgaactggctgaaaaagaactacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattgaacaaaggaaagccctcagtgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26613" stop="29398"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26913" g_stop="27012" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="99" r_length="99" r_score="0.940"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="0.92"/>
            <acceptor a_prob="0.989" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28717" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="500" r_length="401" r_score="0.960"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="29098" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="501" r_stop="546" r_length="46" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E482035" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>544</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E482035" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26913" e_stop="27012"/>
          <exon e_start="28320" e_stop="28717"/>
          <exon e_start="29053" e_stop="29098"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCT---AAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTG</genome_strand>
        <mrna_strand>TTTTGAACGGCCCTCCCTAATTTTTGTC-AAAAGGGTATAATAGAGCGAGGGGTAACAGTCTTTTCTCTAAATCTTTGCATTTTGTTTTTGCTATACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGCACTTCTTGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAAGTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACTGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGAAGGAGGAAGTAAGCAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGATCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCAAAACTGAAGGCCAGAATTGAACTGGCTGAAAAAGAACTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E437478" ref_strand="+" ref_description="SGN-E437478 [cSTA-3-N2]">
      <seq>acggccctccctaatttttgtcaaaaagggtataatagagggaggggtaacagtcttttctctaaatctttgcattttgcttttgctatactcagatcaggcacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaagtgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattactgagccaataaaattcggctctcatgggactgaagaacctaagaaggaggaagttagcagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcagatccattcgttctatactgttaaatttcggagatttgacgacccaaaactgaaggccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattgaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26619" stop="29002"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26919" g_stop="27012" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="94" r_length="94" r_score="0.947"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="0.90"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28702" g_length="383"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="480" r_length="386" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E437478" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>477</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E437478" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26919" e_stop="27012"/>
          <exon e_start="28320" e_stop="28702"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCT---AAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAA</genome_strand>
        <mrna_strand>ACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGGGTAACAGTCTTTTCTCTAAATCTTTGCATTTTGCTTTTGCTATACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGCACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAAGTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACTGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGAAGGAGGAAGTTAGCAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGATCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCAAAACTGAAGGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E485795" ref_strand="+" ref_description="SGN-E485795 [cSTE-19-H1]">
      <seq>ggtaacagtcttttctctaaatctttgcattttgtttttgctatactcagatcaggcacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaagtgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattactgagccaataaaattcggctctcatgggactgaagaacctaagaatgaggaagttagcagaattcctgtgagcaatgttccaaaagatgctgctgaggattggcctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26665" stop="28869"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26964" g_stop="27012" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="49" r_length="49" r_score="0.918"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="0.92"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28569" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="302" r_length="253" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E485795" ref_strand="+">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>299</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E485795" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26964" e_stop="27012"/>
          <exon e_start="28320" e_stop="28569"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAG---GAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGA</genome_strand>
        <mrna_strand>GGTAACAGTCTTTTCTCTAAATCTTTGCATTTTGTTTTTGCTATACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGCACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAAGTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACTGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGAATGAGGAAGTTAGCAGAATTCCTGTGAGCAATGTTCCAAAAGATGCTGCTGAGGATTGGCCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E480974" ref_strand="+" ref_description="SGN-E480974 [cSTD-16-C9]">
      <seq>gtcttttctctaaatctttgcattttgtttttgctatactcagatcaggcacttcttggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaagtgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattactgagccaataaaattcggctctcatgggactgaagaacctaagaaggaggaagtaagcagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcagatccattcgttctatactgttaaatttcggagatttgacgacccaaaactgaaggccagaattgaactggctgaaaaagaactacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26671" stop="29375"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26971" g_stop="27012" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="42" r_length="42" r_score="0.929"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307">
            <donor d_prob="0.932" d_score="0.93"/>
            <acceptor a_prob="0.989" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28717" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="43" r_stop="443" r_length="401" r_score="0.960"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="29075" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="466" r_length="23" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E480974" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>463</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E480974" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26971" e_stop="27012"/>
          <exon e_start="28320" e_stop="28717"/>
          <exon e_start="29053" e_stop="29075"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCAGTAAGTTTTTGCCAAATTCTGTTTTGATTTTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCT---AAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGA</genome_strand>
        <mrna_strand>GTCTTTTCTCTAAATCTTTGCATTTTGTTTTTGCTATACTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGCACTTCTTGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAAGTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACTGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGAAGGAGGAAGTAAGCAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGATCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCAAAACTGAAGGCCAGAATTGAACTGGCTGAAAAAGAACTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E478942" ref_strand="+" ref_description="SGN-E478942 [cSTD-7-D24]">
      <seq>ctgtttcttcttagtttaactgtttatttttttgggggtttctttttgatctgtactgatcttgatcctttttaggatcaggcacttcttggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaagtgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattactgagccaataaaattcggctctcatgggactgaagaacctaagaaggaggaagtaagcagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcagatccattcgttctatactgttaaatttcggagatttgacgacccaaaactgaaggccagaattgaactggctgaaaaagaactacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattgaacaaaggaaagccctcagtgctgagaataaggaattttggagtgctattgatggtaagataaaggaaatggtacctctgcatgaggccctgggccagctccgcggttctaggaatgcaggccgagagaggggtcctacagtgtgttcatctgaggaggagctcaatcatcttattaagggtctgcaataccgcattcagcatgaaagcattcctctgaacgaagagaagcaaattcttcgggaaatcaaacaacttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="26743" stop="29754"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27042" g_stop="27115" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="75" r_length="75" r_score="0.905"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27116" i_stop="28319" i_length="1204">
            <donor d_prob="0.000" d_score="0.90"/>
            <acceptor a_prob="0.989" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28320" g_stop="28717" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="76" r_stop="476" r_length="401" r_score="0.960"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="29247" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="477" r_stop="671" r_length="195" r_score="0.979"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29370" g_stop="29454" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="672" r_stop="756" r_length="85" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E478942" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>752</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E478942" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27042" e_stop="27115"/>
          <exon e_start="28320" e_stop="28717"/>
          <exon e_start="29053" e_stop="29247"/>
          <exon e_start="29370" e_stop="29454"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTTTCTTCTTAGTTTAACTATTTA-TTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAGGTAGTTTTTGTTTGCTTGTGTTTAATTTCTGTATTTATGGTGTGGGTTTTATGTTTTAGGATGAGCGTTGCTAAATTTACTCGTTCTTGATGTAAAAATCTGATCTTTTTGTGTTTCTGCTGGTGTGTTGTACTGATTGTACTTAGGGGTTTAATTTTTTTGTTACTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGTTTGAATTTTAGCTGTTCTTGTGGTAAAAATCTGATCTTTTTTGTGGTATGTGTACTGATTGTACTTGGTTATTTAGTTTTGGGATTGGTGATGTGGGTTTTGTGTTTTAGGAGGAGGGTTGCTTAAATTTTAGCATTTCTTTATGCAAAAGTCTGATCTTTTTTTTTGTGCTCTAGCTATGTGTGTATTGATTGTAATTGGGGATTTGAGCTGATTTTTCAGTTTGTTTTTGCTTTGTTTTGCATCAATGCAAGGATGATTTGGTTTCTAGCTGATTCATTTTTTCTATCCGATGGGGTTTGTTTCCTTGTCTTCAATTTTAGCATAAATGATGTGGGTTTTGTTTTTTGGGAGGAGGGTAGCTAAAATTTTGCAGTTCTTGATGCAAAAATCTGATCCTTTTTGTGCTCTAGCTATATGTGTATTGATTGTACTTGGTGGGTTGAGCTGTTTTTCAGTTTGTTTTGCATCAGTGCACAGTTGATCTTTGGTTTCTAGTAGATTTAGTTTATCTATGTTAAAGATCTAATCGTTACTTTTGATTTTGAATTTGAATTAGTTTGTATGCTGCTTTCTTTTGTCCTTTAAGGTTTATGGATTTTCTCTTATCCAATTTCCTTCTTTTGATTGCTGTTAATGTATATGGGATCGTTTTTTTTTTCTGTGCTCAGCTTCTGAGATGATGACTCTGAAATCTTGTTGTTTATTGAGTCTCGAATGAGTAGCTGCTCTTTTAATCAAAGATCTATTTTTATACTGCTTCATAGCTTGATCATGGATTATTAGGATTCCCTGGGCTGAATCATTCTGCACCAATGGTTTAAAAATTTAGTCCATCTTGCGCCCAATTCATTATTTTGATAACCTTGGTGACTGGGCCGTATAACTTAAAAGTCTTCCATATCGTGTTATTCTTTCTGCCCTCAATTATCGTGTGTCTTCTTGATGCATCTTTCTCACTTGTGTTGAACATAATTTGCTAATGTATTCATTCTTTGCTTCAGGATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCT---AAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTG</genome_strand>
        <mrna_strand>CTGTTTCTTCTTAGTTTAACTGTTTATTTTTTTGGGGGTTTCTTTTTGATCTGTACTGATCTTGATCCTTTTTAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGCACTTCTTGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAAGTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACTGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGAAGGAGGAAGTAAGCAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGATCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCAAAACTGAAGGCCAGAATTGAACTGGCTGAAAAAGAACTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTTGGAGTGCTATTGATGGTAAGATAAAGGAAATGGTACCTCTGCATGAGGCCCTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT..........................................................................................................................ATTAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E486370" ref_strand="+" ref_description="SGN-E486370 [cSTE-21-P20]">
      <seq>cttttctctaaatctttgcattttgtttttgctatactcagatcaggcacttcttggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaagtgaacagatcaatcttctgaaagaaaatggaaagctgaatcatgtttcagggattactgagccaataaaattcggctctcatgggactgaagaacctaagaaggaggaagtaagcagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcagatccattcgttctatactgttaaatttcggagatttgacgacccaaaactgaaggccagaattgaactggctgaaaaggagctacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattgaacaaaggaaagccctcagtgctgagaataaggaattttggagtgctattgatggtaagataaaggaaatggtacctctgcatgaggccctgggccagctccgcggttctaggaatgcaggccgagagaggggtcctacagtgtgttcatctgaggaggagctcaatcatcttattaagggtctgcaataccgcattcagcatgaaagcattcctctgaacgaagagaagcaaattcttcgggaaatcaaacaacttgaaggaacaagggaagatgttaaaaaggttgctgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="27998" stop="29790"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28320" g_stop="28717" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="441" r_length="401" r_score="0.957"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29053" g_stop="29247" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="442" r_stop="636" r_length="195" r_score="0.979"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29370" g_stop="29490" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="637" r_stop="757" r_length="121" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E486370" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>714</cumulative_length_of_scored_exons>
        <coverage percentage="0.943" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E486370" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28320" e_stop="28717"/>
          <exon e_start="29053" e_stop="29247"/>
          <exon e_start="29370" e_stop="29490"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCT---AAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTG</genome_strand>
        <mrna_strand>GATCAGGCACTTCTTGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAAGTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCTGAATCATGTTTCAGGGATTACTGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGAAGGAGGAAGTAAGCAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGATCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCAAAACTGAAGGCCAGAATTGAACTGGCTGAAAAGGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTTGGAGTGCTATTGATGGTAAGATAAAGGAAATGGTACCTCTGCATGAGGCCCTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT..........................................................................................................................ATTAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E365428" ref_strand="+" ref_description="SGN-E365428 [cLPT-2-E8]">
      <seq>tttttgctatactcagatcagggaccttctcggtttgtatttcattgaaatatgggtgttgaggtggaagctaagttagttcatgttccagttgaagctggaactgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattactgagccaataaaattcggctctcatgggactgaagaacctaagaaggaggaaataagtagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcaggtccattcgttctatactgttaaatttcggagatttgacgaccctaaactgaaggccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattgaacaaaggaaagccctcagtgctgagaataaggaatttcggagtgctattgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="28007" stop="29427"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28320" g_stop="28717" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="417" r_length="402" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29053" g_stop="29127" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="418" r_stop="492" r_length="75" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E365428" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>473</cumulative_length_of_scored_exons>
        <coverage percentage="0.961" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E365428" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28320" e_stop="28717"/>
          <exon e_start="29053" e_stop="29127"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCAGGGA-CTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCT---AAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGAT</genome_strand>
        <mrna_strand>GATCAGGGACCTTCTCGGTTTGTATTTCATTGAAATATGGGTGTTGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACTGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAGGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E463005" ref_strand="+" ref_description="SGN-E463005 [cPRO-13-G14]">
      <seq>attttgtttttgctatactcagatcaggcacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaagtgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattactgagccaataaaattcggctctcatgggactgaagaacctaagaaggaggaagtaagcagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcagatccattcgttctatactgttaaatttcggagatttgacgacccaaaactgaaggccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="27998" stop="29021"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28320" g_stop="28717" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="422" r_length="401" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E463005" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>398</cumulative_length_of_scored_exons>
        <coverage percentage="0.907" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E463005" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28320" e_stop="28717"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCT---AAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG</genome_strand>
        <mrna_strand>GATCAGGCACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAAGTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACTGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGAAGGAGGAAGTAAGCAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGATCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCAAAACTGAAGGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E479579" ref_strand="+" ref_description="SGN-E479579 [cSTD-10-D17]">
      <seq>caggcacttctcggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaagtgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattactgagccaataaaattcggctctcatgggactgaagaacctaagaaggaggaagtaagcagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcagatccattcgttctatactgttaaatttcggagatttgacgacccaaaactgaaggccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcactgaacaaaggaaagccctcagtgctgagaataaggaattttggagtgctattgatggtaagataaaggaaatggtacctctgcatgaggccctgagccagctccgcggttctaggaatgcangccgagagaggggtcctacagtgtgttcatctgaggaggagctcaatcatcttattaagggtctgcagtaccgcattcagcatgaaagcattcctctgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="28023" stop="29716"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28323" g_stop="28717" g_length="395"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="398" r_length="398" r_score="0.965"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29053" g_stop="29247" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="399" r_stop="593" r_length="195" r_score="0.964"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29370" g_stop="29416" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="594" r_stop="640" r_length="47" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E479579" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>637</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E479579" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28323" e_stop="28717"/>
          <exon e_start="29053" e_stop="29247"/>
          <exon e_start="29370" e_stop="29416"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCT---AAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAA</genome_strand>
        <mrna_strand>CAGGCACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAAGTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACTGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGAAGGAGGAAGTAAGCAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGATCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCAAAACTGAAGGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCACTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTTGGAGTGCTATTGATGGTAAGATAAAGGAAATGGTACCTCTGCATGAGGCCCTGAGCCAGCTCCGCGGTTCTAGGAATGCANGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT..........................................................................................................................ATTAAGGGTCTGCAGTACCGCATTCAGCATGAAAGCATTCCTCTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E400769" ref_strand="+" ref_description="SGN-E400769 [PPC-2-G17]">
      <seq>ggcacttcttggtttgtatttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaagtgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattactgagccaataaaattcggctctcatgggactgaagaacctaagaaggaggaagtaagcagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcagatccattcgttctatactgttaaatttcggagatttgacgacccaaaactgaaggccagaattgaactggctgaaaaagaactacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattgaacaaaggaaagccctcagtgctgagaataaggaattttggagtgctattgatggtaagataaaggaaatggtacctctgcatgaggccctgggccagctccgcggttctaggaatgcaggccgagagaggggtcctacagtgtgttcatctgaggaggagctcaatcatcttattaagggtctgcaataccgcattcagcatgaaagcattcctctgaacgaagagaagcaaattcttcgggaaatcaaacaacttgaaggaacnagggaagatgntaaaaaggttgctgctgcaagggcacaaattca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="28026" stop="29806"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28325" g_stop="28717" g_length="393"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="396" r_length="396" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29053" g_stop="29247" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="397" r_stop="591" r_length="195" r_score="0.979"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29370" g_stop="29506" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="592" r_stop="728" r_length="137" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E400769" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>725</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E400769" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28325" e_stop="28717"/>
          <exon e_start="29053" e_stop="29247"/>
          <exon e_start="29370" e_stop="29506"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCT---AAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCA</genome_strand>
        <mrna_strand>GGCACTTCTTGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAAGTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACTGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGAAGGAGGAAGTAAGCAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGATCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCAAAACTGAAGGCCAGAATTGAACTGGCTGAAAAAGAACTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTTGGAGTGCTATTGATGGTAAGATAAAGGAAATGGTACCTCTGCATGAGGCCCTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT..........................................................................................................................ATTAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACNAGGGAAGATGNTAAAAAGGTTGCTGCTGCAAGGGCACAAATTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E469019" ref_strand="+" ref_description="SGN-E469019 [cSTB-10-M9]">
      <seq>atttcattgaaatatgggtgtagaggtggaagctaagttagttcatgttccagttgaagctggaagtgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattactgagccaataaaattcggctctcatgggactgaagaacctaagaaggaggaagtaagcagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcagatccattcgttctatactgttaaatttcggagatttgacgacccaaaactgaaggccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattgaacaaaggaaagccctcagtgctgagaataaggaattttggagtgctattgatggtaagataaaggaaatggtacctctgcatgaggccctgggccagctccgcggttctaggaatgcaggccgagagaggggtcctacagtgtgttcatctgaggaggagctcaatcatcttattaagggtctgcagtaccgcattcagcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="28042" stop="29700"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28342" g_stop="28717" g_length="376"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="379" r_length="379" r_score="0.965"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29053" g_stop="29247" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="380" r_stop="574" r_length="195" r_score="0.979"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29370" g_stop="29400" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="575" r_stop="605" r_length="31" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E469019" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>602</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E469019" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28342" e_stop="28717"/>
          <exon e_start="29053" e_stop="29247"/>
          <exon e_start="29370" e_stop="29400"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCT---AAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCATG</genome_strand>
        <mrna_strand>ATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAAGTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACTGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGAAGGAGGAAGTAAGCAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGATCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCAAAACTGAAGGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTTGGAGTGCTATTGATGGTAAGATAAAGGAAATGGTACCTCTGCATGAGGCCCTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT..........................................................................................................................ATTAAGGGTCTGCAGTACCGCATTCAGCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E338124" ref_strand="+" ref_description="SGN-E338124 [cTOE-13-E18]">
      <seq>tggaagctaagttagttcatgttccagttgaagctggaactgaacagatcaatcttctgaaagaaaatggaaagccgaatcatgtttcagggattacggagccaataaaattcggctctcatgggactgaagaacctaaggaggaaataagtagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcaggtccattcgttctatactgttaaatttcggagatttgacgaccctaaactgaaagccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="28068" stop="28998"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28368" g_stop="28698" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="331" r_length="331" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E338124" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>331</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E338124" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28368" e_stop="28698"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGA</genome_strand>
        <mrna_strand>TGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E404506" ref_strand="+" ref_description="SGN-E404506 [PPC-14-C6]">
      <seq>agtccagttgaagctggaagtgaacagatcaatcttctgaaagaaaacggaaagccgaatcatgtttcaaggattactgagccaataaaattcggctctcatgggactgaagaacctaagaaggaggaagtaagcagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcagatccattcgttctatactgttaaatttcggagatttgacgacccaaaactgaaggccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattgaacaaaggaaagccctcagtgctgagaataaagaattttggagtgctattgatggtaagataaaggaaatggtacctctgcatgatgccctgggccagctccgcggttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="28090" stop="29483"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28388" g_stop="28717" g_length="330"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="333" r_length="333" r_score="0.948"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29053" g_stop="29183" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="464" r_length="131" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E404506" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>461</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E404506" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28388" e_stop="28717"/>
          <exon e_start="29053" e_stop="29183"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGA--AA-TAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTC</genome_strand>
        <mrna_strand>AGTCCAGTTGAAGCTGGAAGTGAACAGATCAATCTTCTGAAAGAAAACGGAAAGCCGAATCATGTTTCAAGGATTACTGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGAAGGAGGAAGTAAGCAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGATCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCAAAACTGAAGGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAAGAATTTTGGAGTGCTATTGATGGTAAGATAAAGGAAATGGTACCTCTGCATGATGCCCTGGGCCAGCTCCGCGGTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E326033" ref_strand="+" ref_description="SGN-E326033 [cTOD-1-O19]">
      <seq>gattacggagccaataaaattttgctctcatgggactgaagaacctaaggaggaaataagtagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcaggtccattcgttctatactgttaaatttcggagatttgacgaccctaaactgaaagccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattgaacaaaggaaagccctcagtgctgagaataaggaatttcggagtgctattgatggtaagataaaggaaatggcacctctgcatgaggctttgggccagctccgcggttctaggaatgcaggccgagagaggggtcctacagtgtgttcatctgaggaggagctcaatcatcttatcaagggtctgcaataccgcattcagcatgaaagcattcctctgaacgaagagaagcaaattcttcgggaaatcaaacaacttgaaggaacaagggaagatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="28159" stop="29772"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28459" g_stop="28717" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="259" r_length="259" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29053" g_stop="29247" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="454" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29370" g_stop="29472" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="455" r_stop="557" r_length="103" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E326033" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E326033" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28459" e_stop="28717"/>
          <exon e_start="29053" e_stop="29247"/>
          <exon e_start="29370" e_stop="29472"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATG</genome_strand>
        <mrna_strand>GATTACGGAGCCAATAAAATTTTGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT..........................................................................................................................ATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E326032" ref_strand="+" ref_description="SGN-E326032 [cTOD-1-O9]">
      <seq>gattacggagccaataaaattcggctctcatgggactgaagaacctaaggaggaaataagtagaattcctgtgagcaatgttccaaaggatgcggttgaggattggcctgaacctaagcaggtccattcgttctatactgttaaatttcggagatttgacgaccctaaactgaaagccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattgaacaaaggaaagccctcagtgctgagaataaggaatttcggagtgctattgatggtaagataaaggaaatggcacctctgcatgaggctttgggccagctccgcggttctaggaatgcaggccgagagaggggtcctacagtgtgttcatctgaggaggagctcaatcatcttatcaagggtctgcaataccgcattcagcatgaaagcattcctctgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="28159" stop="29716"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28459" g_stop="28717" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="259" r_length="259" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29053" g_stop="29247" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="454" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29370" g_stop="29416" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="455" r_stop="501" r_length="47" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E326032" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>501</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E326032" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28459" e_stop="28717"/>
          <exon e_start="29053" e_stop="29247"/>
          <exon e_start="29370" e_stop="29416"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAA</genome_strand>
        <mrna_strand>GATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT..........................................................................................................................ATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E307710" ref_strand="+" ref_description="SGN-E307710 [cLEY-16-M7]">
      <seq>ttccaaaggatgcggttgaggattggcctgaacctaagcaggtccattcgttctatactgttaaatttcggagatttgacgaccctaaactgaaagccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaaggatttttaccatgtgttgctgcgttgaactggaagtattataaagtcaaaatgaaagatcttgttatcctacagttttaactaatttctgcaaattcagcaagctttcgctgaaaaatcaattttcattgaacaaaggaaagccctcagtgctgagaataaggaatttcggagtgctattgatggtaagataaaggaaatggcacctctgcatgaggctttgggccagctccgcggttctaggaatgcaggccgagagaggggtcctacagtgtgttcatctgaggaggagctcaatcatcttatcaagggtctgcaataccgcattcagcatgaaagcattcctctgaacgaagagaagcaaattcttcgggaaatcaaacaacttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="28239" stop="29754"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28539" g_stop="28717" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="179" r_length="179" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28718" i_stop="28830" i_length="113">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.340" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28831" g_stop="28937" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="286" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28938" i_stop="29052" i_length="115">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="29247" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="481" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29370" g_stop="29454" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="482" r_stop="566" r_length="85" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E307710" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>566</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E307710" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28539" e_stop="28717"/>
          <exon e_start="28831" e_stop="28937"/>
          <exon e_start="29053" e_stop="29247"/>
          <exon e_start="29370" e_stop="29454"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTG</genome_strand>
        <mrna_strand>TTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG.................................................................................................................ATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTC...................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT..........................................................................................................................ATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E590556" ref_strand="+" ref_description="SGN-E590556 [44154]">
      <seq>ccaaaggatgcggttgaggattggctgaacctaagcagatccattcgttctatactgttaaatttcggagatttgacgacccaaaactgaaggccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattgaacaaaggaaagccctcagtgctgagaataaggaattttggagtgctattgatggtaagataaaggaaatggtacctctgcatgaggccctgggccagctccgcggttctaggaatgcaggccgagagaggggtcctacagtgtgttcatctgaggaggagctcaatcatcttattaagggtctgcagtaccgcattcagcatgaaagcattcctctgaatgaagagaagcaaattcttcgggaaatcaaacaacttgaaggaacaagggaagatgttaaaaaggttgctgctgcaagggcacaaattcatgagacgatgggtgaaaaagaatcaatccagaaccaggtcaaacttatgaatgttggcttggatggagttcgtaaggggcaacaggaagttaagggcaggcttaagataatagatgatcagattgatgccataaacaaacagatcggcatattggatgaggaattgaagggcgttgtggagaagagggacaagacttatgaacatattctggaattgagaaaactgcgcgaagaagggaattcttctttctaccaaaacgcgaacgtgttgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="28241" stop="30170"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28541" g_stop="28717" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="176" r_length="176" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29053" g_stop="29247" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="371" r_length="195" r_score="0.979"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29370" g_stop="29549" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="551" r_length="180" r_score="0.961"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29550" i_stop="29675" i_length="126">
            <donor d_prob="0.985" d_score="0.94"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29676" g_stop="29870" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="552" r_stop="746" r_length="195" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E590556" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>747</cumulative_length_of_scored_exons>
        <coverage percentage="0.956" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E590556" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28541" e_stop="28717"/>
          <exon e_start="29053" e_stop="29247"/>
          <exon e_start="29370" e_stop="29549"/>
          <exon e_start="29676" e_stop="29870"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAAGTAAGGCCTTTATGTTATGTTTCTCTTATACAGATGCAAATATTTAGGTTTCATGGCTGTATCGTATCATGTGAGTTTGCTGTGATCTGCATATGATAACTGCTAACCTGCCGCTGGTATTTGTAGCTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGG</genome_strand>
        <mrna_strand>CCAAAGGATGCGGTTGAGGATTGG-CTGAACCTAAGCAGATCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCAAAACTGAAGGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTTGGAGTGCTATTGATGGTAAGATAAAGGAAATGGTACCTCTGCATGAGGCCCTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT..........................................................................................................................ATTAAGGGTCTGCAGTACCGCATTCAGCATGAAAGCATTCCTCTGAATGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGGGCACAAATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAACCAGGTCAAA..............................................................................................................................CTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGGCAACAGGAAGTTAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGCATATTGGATGAGGAATTGAAGGGCGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACTGCGCGAAGAAGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E269528" ref_strand="+" ref_description="SGN-E269528 [cLEM-2-E15]">
      <seq>ctgaacctaagcaggtccattcgttctatactgttaaatttcggagatttgacgaccctaaactgaaagccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattgaacaaaggaaagccctcagtgctgagaataaggaatttcggagtgctattgatggtaagataaaggaaatggcacctctgcatgaggctttgggccagctccgcggttctaggaatgcaggccgagagaggggtcctacagtgtgttcatctgaggaggagctcaatcatcttatcaagggtctgcaataccgcattcagcatgaaagcattactgtgaacgaagagaagcaaattcttctggaaatcagacaacttgaaggaacaagggaagatgttaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="28266" stop="29777"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28566" g_stop="28717" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="152" r_length="152" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29053" g_stop="29247" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="153" r_stop="347" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29370" g_stop="29477" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="348" r_stop="455" r_length="108" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E269528" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>455</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E269528" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28566" e_stop="28717"/>
          <exon e_start="29053" e_stop="29247"/>
          <exon e_start="29370" e_stop="29477"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAA</genome_strand>
        <mrna_strand>CTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT..........................................................................................................................ATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTACTGTGAACGAAGAGAAGCAAATTCTTCTGGAAATCAGACAACTTGAAGGAACAAGGGAAGATGTTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E329542" ref_strand="+" ref_description="SGN-E329542 [cTOD-11-A12]">
      <seq>ttcgttctatactgttaaatttcggagattggacgaccgtaaactgaaagccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattgaacaaaggaaagccctcagtgctgagaataaggaatttcggagtgctattgatggtaagataaaggaaatggcacctctgcatgaggctttgggccagctccgcggttctaggaatgcaggccgagagaggggtcctacagtgtgttcatctgaggaggagctcaatcatcttatcaagggtctgcaataccgcattcagcatgaaagcattcctctgaacgaagagaagcaaattcttcgggaaatcaaacaacttgaaggaacaagggaagatgttaaaaaggttgctgctgcaagagcacagattcatgagacgatgggtgaaaaagaatcaatccagagtcaggtcaaacttatgaatgttggcttggatggagttcgtaagggacaacaggaagtcaaaggcaggcttaagataatagatgatcagatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="28285" stop="30056"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28585" g_stop="28717" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="133" r_length="133" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29053" g_stop="29247" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="134" r_stop="328" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29370" g_stop="29549" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="329" r_stop="508" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29550" i_stop="29675" i_length="126">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29676" g_stop="29756" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="509" r_stop="589" r_length="81" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E329542" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>589</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E329542" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28585" e_stop="28717"/>
          <exon e_start="29053" e_stop="29247"/>
          <exon e_start="29370" e_stop="29549"/>
          <exon e_start="29676" e_stop="29756"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAAGTAAGGCCTTTATGTTATGTTTCTCTTATACAGATGCAAATATTTAGGTTTCATGGCTGTATCGTATCATGTGAGTTTGCTGTGATCTGCATATGATAACTGCTAACCTGCCGCTGGTATTTGTAGCTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATT</genome_strand>
        <mrna_strand>TTCGTTCTATACTGTTAAATTTCGGAGATTGGACGACCGTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT..........................................................................................................................ATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAA..............................................................................................................................CTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAAGGCAGGCTTAAGATAATAGATGATCAGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E479343" ref_strand="+" ref_description="SGN-E479343 [cSTD-9-F1]">
      <seq>ccaaaactgaaggccagaattgaactggctgaaaaagagctacagaaaaagaaccaagctagatctcagatcattgaaaaattgaaggccaaaagggctgaaaaatcaattttcattgaacaaaggaaagccctcagtgctgagaataaggaattttggagtgctattgatggtaagaataaaggaaatggtacctctgcatgaggccctgggccagctccgcggttctaggaatgcaggccgagagaggggtcctacagtgtgttcatctgaggaggagctcaatcatcttattaagggtctgcagtaccgcattcagcatgaaagcattcctctgaacgaagagaagcaaattcttcgggaaatcaaacaactcgaaggaacaagggaagatgttaaaaaggttgctgctgcaagggcacaaattcatgagacgatgggtgaaaaagaatcaatccagaaccaggtcaaacttatgaatgttggcttggatggagntncgtaaggggcaacagggaagttaagggcaggcttaagataatagatgatcagattgatgccataaacaaacagatcggcatattggatgaagaattgaaaggcgttgtggagaaaaagggacagacttatgaacatattctggaattgagaaaactgcgtgaagaaggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="28322" stop="30170"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28622" g_stop="28717" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="96" r_length="96" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29053" g_stop="29247" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="97" r_stop="292" r_length="196" r_score="0.969"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29370" g_stop="29549" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="293" r_stop="472" r_length="180" r_score="0.961"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29550" i_stop="29675" i_length="126">
            <donor d_prob="0.985" d_score="0.94"/>
            <acceptor a_prob="0.997" a_score="0.85"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29676" g_stop="29870" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="473" r_stop="669" r_length="197" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E479343" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>666</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E479343" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28622" e_stop="28717"/>
          <exon e_start="29053" e_stop="29247"/>
          <exon e_start="29370" e_stop="29549"/>
          <exon e_start="29676" e_stop="29870"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAG-ATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAAGTAAGGCCTTTATGTTATGTTTCTCTTATACAGATGCAAATATTTAGGTTTCATGGCTGTATCGTATCATGTGAGTTTGCTGTGATCTGCATATGATAACTGCTAACCTGCCGCTGGTATTTGTAGCTTATGAATGTTGGCTTGGATGGAG-TTCGTAAGGGACAACA-GGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGG</genome_strand>
        <mrna_strand>CCAAAACTGAAGGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG...............................................................................................................................................................................................................................................................................................................................................GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTTGGAGTGCTATTGATGGTAAGAATAAAGGAAATGGTACCTCTGCATGAGGCCCTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT..........................................................................................................................ATTAAGGGTCTGCAGTACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTCGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGGGCACAAATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAACCAGGTCAAA..............................................................................................................................CTTATGAATGTTGGCTTGGATGGAGNTNCGTAAGGGGCAACAGGGAAGTTAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGCATATTGGATGAAGAATTGAAAGGCGTTGTGGAGAAAAAGGGACAGACTTATGAACATATTCTGGAATTGAGAAAACTGCGTGAAGAAGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E307609" ref_strand="+" ref_description="SGN-E307609 [cLEY-16-M6]">
      <seq>agctacagaaaaagaaccaagctagatctcatatcattgaaaaattgaaggccaaaaagatttttaccatgtgttgctgcgttgaactggaagtattataaagtcaaaatgaaagatcttgttatcctacagttttaactaatttctgcaaattcagcaagctatcgctgaaaaatcaattatcattgaacaaaggaaagccctcagtgctgagaataaagaatttcggagtgctattgatggtaagataaaggaaatggcacctctgcatgaggctttgggcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="28359" stop="29470"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28659" g_stop="28717" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="59" r_length="59" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28718" i_stop="28830" i_length="113">
            <donor d_prob="0.996" d_score="0.96"/>
            <acceptor a_prob="0.340" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28831" g_stop="28937" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="60" r_stop="166" r_length="107" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28938" i_stop="29052" i_length="115">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29053" g_stop="29170" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="284" r_length="118" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E307609" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>284</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E307609" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28659" e_stop="28717"/>
          <exon e_start="28831" e_stop="28937"/>
          <exon e_start="29053" e_stop="29170"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGGGTAAGTTTTTTGGTGAATCTTTCTTTGGCTGTATTTTTCAAGAGCATATTATTTGGTATCTCTCTAGTATTGTTAAAATCATGGAGTTGTTTATGACATGATCCTAAAATCAGATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTCGTAAGTTGATATTGCCAATTGCATGGCCCATTTTGTTAGTTGCCAATTCTTTTTCCAATTTATGGCCTTGTGGGAGTATGGCGGCTATAATTTAATGGTCTTTGTGTATTTTCAGGCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCC</genome_strand>
        <mrna_strand>AGCTACAGAAAAAGAACCAAGCTAGATCTCATATCATTGAAAAATTGAAGGCCAAAAAG.................................................................................................................ATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTATC...................................................................................................................GCTGAAAAATCAATTATCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAAGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E262048" ref_strand="+" ref_description="SGN-E262048 [cLEG-58-J18]">
      <seq>ttcattgaacaaaggaaagccctcagtgctgagaataaggaatttcggagtgctattgatggtaagataaaggaaatggcacctctgcatgaggctttgggccagctccgcggttctaggaatgcaggccgagagaggggtcctacagtgtgttcatctgaggaggagctcaatcatcttatcaagggtctgcaataccgcattcagcatgaaagcattcctctgaacgaagagaagcaaattcttcgggaaatcaaacaacttgaaggaacaagggaagatgttaaaaaggttgctgctgcaagagcacagattcatgagacgatgggtgaaaaagaatcaatccagagtcaggtcaaacttatgaatgttggcttggatggagttcgtaagggacaacaggaagtcaagggcaggcttaagataatagatgatcagattgatgccataaacaaacagatcggtatattggatgaggaattgaaggacgttgtggagaagagggacaagacttatgaacatattctggaattgagaaaacagcgtgaagaagggaattcttctttctatcaaaactccaacgtgttgcacaaagtgaaacaacttgctgaccaaaaggatgttggagcccttaaagagctttcagttac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="28768" stop="31088"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29068" g_stop="29247" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="180" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29370" g_stop="29549" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="360" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29550" i_stop="29675" i_length="126">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29676" g_stop="29870" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="361" r_stop="555" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29871" i_stop="30693" i_length="823">
            <donor d_prob="0.773" d_score="1.00"/>
            <acceptor a_prob="0.475" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30694" g_stop="30788" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="556" r_stop="650" r_length="95" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E262048" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>650</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E262048" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29068" e_stop="29247"/>
          <exon e_start="29370" e_stop="29549"/>
          <exon e_start="29676" e_stop="29870"/>
          <exon e_start="30694" e_stop="30788"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAAGTAAGGCCTTTATGTTATGTTTCTCTTATACAGATGCAAATATTTAGGTTTCATGGCTGTATCGTATCATGTGAGTTTGCTGTGATCTGCATATGATAACTGCTAACCTGCCGCTGGTATTTGTAGCTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGGGTATGCTGCTGCTTCCTGTCTTACTATTTTGGTTAAAAAAAGGGTTCATGGTATATGTTATGCTCAAATTAAATCCAATTAAAACAAAAAAAGATTCAATCCCATTGTTTTCCTTCGGTGAATCATCAACAATCAATTACATACGAGATGCTTCAATTACTGTGCTTCTACTTGTTACTGTTCTGATGATGCCATATGCTACCCATATATGGTCTATTGATCTATCTGTTTCCATGTTTGATTACATGTTTTTGTTGTGTTGTGTTGTCCTGTATCTTTGTAGTTGCCTTATGTGTAGGAATTTTATGAGTGATCAGAAAAATTTCTCCGTCGTCTACACTATTTTTTGTTAGGAGAGCAGGTAGAAACATTTCATTACTGGTCTAGATACATGCTTCACGGGCGCTGGTAAGTGACATGATGGTTGCCTGGAATTTTATAGTAATGACGACTTCTGGTTTTGCTCATGTATATTTGATTTCTAACTTGCTAGTGTCTTTCGTGTATATTTGACTGAGTACCGCAACTGTCCTTGGTAACTAACAGCTTCTAGAGACACACCCAAAAAGAAAAAATAACAGTTAAAAGGATGGCAGCTGAGAGGTAAGGAAGGTTGCTCTTCCTAAAAAGGAATAGAAAACAGTAGGAAATTTTACATCTCAAGGGAGAAGCCAGTTGATTTGTTTATGTCAACTCTCTGAAATCTTTCACGGGCGCTATTATCTTTAAAAAAATTGAAATGTTTTTTTTGATTACTGCAGTGTCAAGAGAAATAGTCTCTAAACTTATGTAGTCTTTATAACCAATTTCCTGCAATTTTCAGAATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTAC</genome_strand>
        <mrna_strand>TTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT..........................................................................................................................ATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAA..............................................................................................................................CTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E257689" ref_strand="+" ref_description="SGN-E257689 [cLEG-39-G18]">
      <seq>ttcattgaacaaaggaaagccctcagtgctgagaataaggaatttcggagtggtattgatggtaagataaaggaaatggcacctctgcatgaggctttgggccagctccgcggttctaggaatgcaggccgagagaggggtcctacactgtgttcatctgaggaggagctcaatcatcttatcaagggtctgcaataccgcattcagcatgaaagcattcctctgaacgaagagaagcaaattcttcgggaaatcaaacaacttgaaggaacaagggaagatgttaaaaaggttgctgctgcaagagcacagattcatgagacgatgggtgaaaaagaatcaatccagagtcaggtcaaacttatgaatgttggcttggatggagttcgtaagggacaacaagaagtcaagggcaggcttaagataatagatgatcagattgatgccataaacaaacagatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="28768" stop="30077"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29068" g_stop="29247" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="180" r_length="180" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29370" g_stop="29549" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="360" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29550" i_stop="29675" i_length="126">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29676" g_stop="29777" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="361" r_stop="462" r_length="102" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E257689" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>462</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E257689" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29068" e_stop="29247"/>
          <exon e_start="29370" e_stop="29549"/>
          <exon e_start="29676" e_stop="29777"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAAGTAAGGCCTTTATGTTATGTTTCTCTTATACAGATGCAAATATTTAGGTTTCATGGCTGTATCGTATCATGTGAGTTTGCTGTGATCTGCATATGATAACTGCTAACCTGCCGCTGGTATTTGTAGCTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATC</genome_strand>
        <mrna_strand>TTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGGTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACACTGTGTTCATCTGAGGAGGAGCTCAATCATCTT..........................................................................................................................ATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAA..............................................................................................................................CTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAAGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E440829" ref_strand="+" ref_description="SGN-E440829 [cSTA-27-M15]">
      <seq>caaaggaaagccctcagtgctgagaataaggaattttggagtgctattgatggtaagataaaggaaatggtacctctgcatgaggccctgggccagctccgcggttctaggaatgcaggccgagagaggggtcctacagtgtgttcatctgaggaggagctcaatcatcttattaagggtctgcagtaccgcattcagcatgaaagcattcctctgaacgaagagaagcaaattcttcgggaaatcaaacaactcgaaggaacaagggaagatgttaaaaaggttgctgctgcaagggcacaaattcatgagacgatgggtgaaaaagaatcaatccagaaccaggtcaaacttatgaatgttggcttggatggagttcgtaaggggcaacaggaagttaagggcaggcttaagataatagatgatcagattgatgccataaacaaacagatcggcatattggatgaggaattgaagggcgttgtggagaagagggacaagacttatgaacatattctggaattgagaaaactgcgtgaagaagggaattcttctttctaccaaaactccaacgtgttgcacaaagtgaaacaacttgctgatcaaaaagatgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="28777" stop="31062"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29077" g_stop="29247" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29370" g_stop="29549" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="351" r_length="180" r_score="0.961"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29550" i_stop="29675" i_length="126">
            <donor d_prob="0.985" d_score="0.94"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29676" g_stop="29870" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="352" r_stop="546" r_length="195" r_score="0.974"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29871" i_stop="30693" i_length="823">
            <donor d_prob="0.773" d_score="0.98"/>
            <acceptor a_prob="0.475" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30694" g_stop="30762" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="547" r_stop="615" r_length="69" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E440829" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>615</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E440829" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29077" e_stop="29247"/>
          <exon e_start="29370" e_stop="29549"/>
          <exon e_start="29676" e_stop="29870"/>
          <exon e_start="30694" e_stop="30762"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAAGTAAGGCCTTTATGTTATGTTTCTCTTATACAGATGCAAATATTTAGGTTTCATGGCTGTATCGTATCATGTGAGTTTGCTGTGATCTGCATATGATAACTGCTAACCTGCCGCTGGTATTTGTAGCTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGGGTATGCTGCTGCTTCCTGTCTTACTATTTTGGTTAAAAAAAGGGTTCATGGTATATGTTATGCTCAAATTAAATCCAATTAAAACAAAAAAAGATTCAATCCCATTGTTTTCCTTCGGTGAATCATCAACAATCAATTACATACGAGATGCTTCAATTACTGTGCTTCTACTTGTTACTGTTCTGATGATGCCATATGCTACCCATATATGGTCTATTGATCTATCTGTTTCCATGTTTGATTACATGTTTTTGTTGTGTTGTGTTGTCCTGTATCTTTGTAGTTGCCTTATGTGTAGGAATTTTATGAGTGATCAGAAAAATTTCTCCGTCGTCTACACTATTTTTTGTTAGGAGAGCAGGTAGAAACATTTCATTACTGGTCTAGATACATGCTTCACGGGCGCTGGTAAGTGACATGATGGTTGCCTGGAATTTTATAGTAATGACGACTTCTGGTTTTGCTCATGTATATTTGATTTCTAACTTGCTAGTGTCTTTCGTGTATATTTGACTGAGTACCGCAACTGTCCTTGGTAACTAACAGCTTCTAGAGACACACCCAAAAAGAAAAAATAACAGTTAAAAGGATGGCAGCTGAGAGGTAAGGAAGGTTGCTCTTCCTAAAAAGGAATAGAAAACAGTAGGAAATTTTACATCTCAAGGGAGAAGCCAGTTGATTTGTTTATGTCAACTCTCTGAAATCTTTCACGGGCGCTATTATCTTTAAAAAAATTGAAATGTTTTTTTTGATTACTGCAGTGTCAAGAGAAATAGTCTCTAAACTTATGTAGTCTTTATAACCAATTTCCTGCAATTTTCAGAATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTT</genome_strand>
        <mrna_strand>CAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTTGGAGTGCTATTGATGGTAAGATAAAGGAAATGGTACCTCTGCATGAGGCCCTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT..........................................................................................................................ATTAAGGGTCTGCAGTACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTCGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGGGCACAAATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAACCAGGTCAAA..............................................................................................................................CTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGGCAACAGGAAGTTAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGCATATTGGATGAGGAATTGAAGGGCGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACTGCGTGAAGAAGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTTCTTTCTACCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGATCAAAAAGATGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E708007" ref_strand="+" ref_description="SGN-E708007 [FA34CC12]">
      <seq>ccgttagggctcagtgctgagaataaggaatttcggagtgctattgatggtaagataaaggaaatggcacctctgcatgaggctttgggccagctccgcggttctaggaatgcaggccgagagaggggtcctacagtgtgttcatctgaggaggagctcaatcatcttatcaagggtctgcaataccgcattcagcatgaaagcattcctctgaacgaagagaagcaaattcttcgggaaatcaaacaacttgaaggaacaagggaagatgttaaaaaggttgctgctgcaagagcacagattcatgagacgatgggtgaaaaagaatcaatccagagtcaggtcaaacttatgaatgttggcttggatggagttcgtaagggacaacaggaagtcaagggcaggcttaagataatagatgatcagattgatgccataaacaaacagatcggtatattggatgaggaattgaaggacgttgtggagaagagggacaagacttatgaacatattctggaattgagaaaacagcgtgaagaagggaattcttctttctatcaaaactccaacgtgttgcacaaagtgaaacaacttgctgaccaaaaggatgttggagcccttaaagagctttcagttacagaggtcgacaagttcatttctctttggtgtggtagtaagtcttttagagatgactatgagaggagactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="28785" stop="31233"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29080" g_stop="29247" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="168" r_length="168" r_score="0.964"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29370" g_stop="29549" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="348" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29550" i_stop="29675" i_length="126">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29676" g_stop="29870" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="349" r_stop="543" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29871" i_stop="30693" i_length="823">
            <donor d_prob="0.773" d_score="1.00"/>
            <acceptor a_prob="0.475" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30694" g_stop="30792" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="544" r_stop="642" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="30793" i_stop="30867" i_length="75">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="30868" g_stop="30933" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="643" r_stop="708" r_length="66" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E708007" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>708</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E708007" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29080" e_stop="29247"/>
          <exon e_start="29370" e_stop="29549"/>
          <exon e_start="29676" e_stop="29870"/>
          <exon e_start="30694" e_stop="30792"/>
          <exon e_start="30868" e_stop="30933"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAAGTAAGGCCTTTATGTTATGTTTCTCTTATACAGATGCAAATATTTAGGTTTCATGGCTGTATCGTATCATGTGAGTTTGCTGTGATCTGCATATGATAACTGCTAACCTGCCGCTGGTATTTGTAGCTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGGGTATGCTGCTGCTTCCTGTCTTACTATTTTGGTTAAAAAAAGGGTTCATGGTATATGTTATGCTCAAATTAAATCCAATTAAAACAAAAAAAGATTCAATCCCATTGTTTTCCTTCGGTGAATCATCAACAATCAATTACATACGAGATGCTTCAATTACTGTGCTTCTACTTGTTACTGTTCTGATGATGCCATATGCTACCCATATATGGTCTATTGATCTATCTGTTTCCATGTTTGATTACATGTTTTTGTTGTGTTGTGTTGTCCTGTATCTTTGTAGTTGCCTTATGTGTAGGAATTTTATGAGTGATCAGAAAAATTTCTCCGTCGTCTACACTATTTTTTGTTAGGAGAGCAGGTAGAAACATTTCATTACTGGTCTAGATACATGCTTCACGGGCGCTGGTAAGTGACATGATGGTTGCCTGGAATTTTATAGTAATGACGACTTCTGGTTTTGCTCATGTATATTTGATTTCTAACTTGCTAGTGTCTTTCGTGTATATTTGACTGAGTACCGCAACTGTCCTTGGTAACTAACAGCTTCTAGAGACACACCCAAAAAGAAAAAATAACAGTTAAAAGGATGGCAGCTGAGAGGTAAGGAAGGTTGCTCTTCCTAAAAAGGAATAGAAAACAGTAGGAAATTTTACATCTCAAGGGAGAAGCCAGTTGATTTGTTTATGTCAACTCTCTGAAATCTTTCACGGGCGCTATTATCTTTAAAAAAATTGAAATGTTTTTTTTGATTACTGCAGTGTCAAGAGAAATAGTCTCTAAACTTATGTAGTCTTTATAACCAATTTCCTGCAATTTTCAGAATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAGGTATGATGTATTTTTCACCGGTAGTTGTTATATTTATGTGTTTGGTATTGACAACCATCTTTTTTCTTTCACTAGGTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTC</genome_strand>
        <mrna_strand>CCGTTAGGGCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT..........................................................................................................................ATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAA..............................................................................................................................CTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAG...........................................................................GTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E702409" ref_strand="+" ref_description="SGN-E702409 [FA18CE11]">
      <seq>ggaaagccctcagtgctgagaataaggaatttcggagtgctattgatggtaagataaaggaaatggcacctctgcatgaggctttgggccagctccgcggttctaggaatgcaggccgagagaggggtcctacagtgtgttcatctgaggaggagctcaatcatcttatcaagggtctgcaataccgcattcagcatgaaagcattcctctgaacgaagagaagcaaattcttcgggaaatcaaacaacttgaaggaacaagggaagatgttaaaaaggttgctgctgcaagagcacagattcatgagacgatgggtgaaaaagaatcaatccagagtcaggtcaaacttatgaatgttggcttggatggagttcgtaagggacaacaggaagtcaagggcaggcttaagataatagatgatcagattgatgccataaacaaacagatcggtatattggatgaggaattgaaggacgttgtggagaagagggacaagacttatgaacatattctggaattgagaaaacagcgtgaagaagggaattcttctttctatcaaaactccaacgtgttgcacaaagtgaaacaacttgctgaccaaaaggatgttggagcccttaaagagctttcagttacagaggtcgacaagttcatttctctttggtgtggtagtaagtcttttagagatgactatgagaggagactcttgcagtcgcttgatattaggcagctgagcagggacggcaggatgaggaatcctngatgaaagccactggtgttaccagaagcacctactgtctcccgtgctgaagttccagcaagagctaatgcaaaacccgttaaggaagatcatgcacccgttgatgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="28781" stop="31396"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29081" g_stop="29247" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="167" r_length="167" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29370" g_stop="29549" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="168" r_stop="347" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29550" i_stop="29675" i_length="126">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29676" g_stop="29870" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="348" r_stop="542" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29871" i_stop="30693" i_length="823">
            <donor d_prob="0.773" d_score="1.00"/>
            <acceptor a_prob="0.475" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30694" g_stop="30792" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="543" r_stop="641" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="30793" i_stop="30867" i_length="75">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="30868" g_stop="31096" g_length="229"/>
          <reference_exon_boundary r_type="cDNA" r_start="642" r_stop="870" r_length="229" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E702409" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>870</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E702409" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29081" e_stop="29247"/>
          <exon e_start="29370" e_stop="29549"/>
          <exon e_start="29676" e_stop="29870"/>
          <exon e_start="30694" e_stop="30792"/>
          <exon e_start="30868" e_stop="31096"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAAGTAAGGCCTTTATGTTATGTTTCTCTTATACAGATGCAAATATTTAGGTTTCATGGCTGTATCGTATCATGTGAGTTTGCTGTGATCTGCATATGATAACTGCTAACCTGCCGCTGGTATTTGTAGCTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGGGTATGCTGCTGCTTCCTGTCTTACTATTTTGGTTAAAAAAAGGGTTCATGGTATATGTTATGCTCAAATTAAATCCAATTAAAACAAAAAAAGATTCAATCCCATTGTTTTCCTTCGGTGAATCATCAACAATCAATTACATACGAGATGCTTCAATTACTGTGCTTCTACTTGTTACTGTTCTGATGATGCCATATGCTACCCATATATGGTCTATTGATCTATCTGTTTCCATGTTTGATTACATGTTTTTGTTGTGTTGTGTTGTCCTGTATCTTTGTAGTTGCCTTATGTGTAGGAATTTTATGAGTGATCAGAAAAATTTCTCCGTCGTCTACACTATTTTTTGTTAGGAGAGCAGGTAGAAACATTTCATTACTGGTCTAGATACATGCTTCACGGGCGCTGGTAAGTGACATGATGGTTGCCTGGAATTTTATAGTAATGACGACTTCTGGTTTTGCTCATGTATATTTGATTTCTAACTTGCTAGTGTCTTTCGTGTATATTTGACTGAGTACCGCAACTGTCCTTGGTAACTAACAGCTTCTAGAGACACACCCAAAAAGAAAAAATAACAGTTAAAAGGATGGCAGCTGAGAGGTAAGGAAGGTTGCTCTTCCTAAAAAGGAATAGAAAACAGTAGGAAATTTTACATCTCAAGGGAGAAGCCAGTTGATTTGTTTATGTCAACTCTCTGAAATCTTTCACGGGCGCTATTATCTTTAAAAAAATTGAAATGTTTTTTTTGATTACTGCAGTGTCAAGAGAAATAGTCTCTAAACTTATGTAGTCTTTATAACCAATTTCCTGCAATTTTCAGAATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAGGTATGATGTATTTTTCACCGGTAGTTGTTATATTTATGTGTTTGGTATTGACAACCATCTTTTTTCTTTCACTAGGTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCT-GATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTG</genome_strand>
        <mrna_strand>GGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT..........................................................................................................................ATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAA..............................................................................................................................CTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAG...........................................................................GTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTNGATG-AAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E577398" ref_strand="+" ref_description="SGN-E577398 [35370]">
      <seq>ggaaagccctcagtgctgagaataaggaattttggagtgctattgatggtaagataaaggaaatggtacctctgcatgaggccctgggccagctccgcggttctaggaatgcaggccgagagaggggtcctacagtgtgttcatctgaggaggagctcaatcatcttattaagggtctgcaataccgcattcagcatgaaagcattcctctgaacgaagagaagcaaattcttcgggaaatcaaacaacttgaaggaacaagggaagatgttaaaaaggttgctgctgcaagggcacaaattcatgagacgatgggtgaaaaagaatcaatccagaaccaggtcaaacttatgaatgttggcttggatggagttcgtaaggggcaacaggaagttaagggcaggcttaagataatagatgatcagattgatgccataaacaaacagatcggcatattggatgaggaactgaagggtgttgtggagaagagggacaagacttatgaacatattctggaattgagaaaactgcgtgaagaagggaattcttctttctaccaaaactccaacgtgttgcacaaagtgaaacaacttgctgatcaaaaggatgttggagcccttaaagagctctcagttacagaggtcgacaagttcatttctctttggtgtggtagtaagtcttttagagatgactatgagaggagactcttgccagtcgctcgatattaggcagctgagcagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="28781" stop="31266"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29081" g_stop="29247" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="167" r_length="167" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29370" g_stop="29549" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="168" r_stop="347" r_length="180" r_score="0.972"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29550" i_stop="29675" i_length="126">
            <donor d_prob="0.985" d_score="0.94"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29676" g_stop="29870" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="348" r_stop="542" r_length="195" r_score="0.964"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29871" i_stop="30693" i_length="823">
            <donor d_prob="0.773" d_score="0.98"/>
            <acceptor a_prob="0.475" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30694" g_stop="30792" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="543" r_stop="641" r_length="99" r_score="0.970"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="30793" i_stop="30867" i_length="75">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="30868" g_stop="30966" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="642" r_stop="741" r_length="100" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E577398" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>740</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E577398" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29081" e_stop="29247"/>
          <exon e_start="29370" e_stop="29549"/>
          <exon e_start="29676" e_stop="29870"/>
          <exon e_start="30694" e_stop="30792"/>
          <exon e_start="30868" e_stop="30966"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAAGTAAGGCCTTTATGTTATGTTTCTCTTATACAGATGCAAATATTTAGGTTTCATGGCTGTATCGTATCATGTGAGTTTGCTGTGATCTGCATATGATAACTGCTAACCTGCCGCTGGTATTTGTAGCTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGGGTATGCTGCTGCTTCCTGTCTTACTATTTTGGTTAAAAAAAGGGTTCATGGTATATGTTATGCTCAAATTAAATCCAATTAAAACAAAAAAAGATTCAATCCCATTGTTTTCCTTCGGTGAATCATCAACAATCAATTACATACGAGATGCTTCAATTACTGTGCTTCTACTTGTTACTGTTCTGATGATGCCATATGCTACCCATATATGGTCTATTGATCTATCTGTTTCCATGTTTGATTACATGTTTTTGTTGTGTTGTGTTGTCCTGTATCTTTGTAGTTGCCTTATGTGTAGGAATTTTATGAGTGATCAGAAAAATTTCTCCGTCGTCTACACTATTTTTTGTTAGGAGAGCAGGTAGAAACATTTCATTACTGGTCTAGATACATGCTTCACGGGCGCTGGTAAGTGACATGATGGTTGCCTGGAATTTTATAGTAATGACGACTTCTGGTTTTGCTCATGTATATTTGATTTCTAACTTGCTAGTGTCTTTCGTGTATATTTGACTGAGTACCGCAACTGTCCTTGGTAACTAACAGCTTCTAGAGACACACCCAAAAAGAAAAAATAACAGTTAAAAGGATGGCAGCTGAGAGGTAAGGAAGGTTGCTCTTCCTAAAAAGGAATAGAAAACAGTAGGAAATTTTACATCTCAAGGGAGAAGCCAGTTGATTTGTTTATGTCAACTCTCTGAAATCTTTCACGGGCGCTATTATCTTTAAAAAAATTGAAATGTTTTTTTTGATTACTGCAGTGTCAAGAGAAATAGTCTCTAAACTTATGTAGTCTTTATAACCAATTTCCTGCAATTTTCAGAATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAGGTATGATGTATTTTTCACCGGTAGTTGTTATATTTATGTGTTTGGTATTGACAACCATCTTTTTTCTTTCACTAGGTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTG-CAGTCGCTTGATATTAGGCAGCTGAGCAGG</genome_strand>
        <mrna_strand>GGAAAGCCCTCAGTGCTGAGAATAAGGAATTTTGGAGTGCTATTGATGGTAAGATAAAGGAAATGGTACCTCTGCATGAGGCCCTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT..........................................................................................................................ATTAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGGGCACAAATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAACCAGGTCAAA..............................................................................................................................CTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGGCAACAGGAAGTTAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGCATATTGGATGAGGAACTGAAGGGTGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACTGCGTGAAGAAGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTTCTTTCTACCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGATCAAAAGGATGTTGGAGCCCTTAAAGAGCTCTCAGTTACAGAG...........................................................................GTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCCAGTCGCTCGATATTAGGCAGCTGAGCAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E451181" ref_strand="+" ref_description="SGN-E451181 [cSTS-12-A13]">
      <seq>aaggaattttggagtgctattgatggtaagataaaggaaatggtacctctgcatgaggccctgggccagctccgcggttctaggaatgcaggccgagagaggggtcctacagtgtgttcatctgaggaggagctcaatcatcttattaagggtctgcagtaccgcattcagcatgaaagcattcctctgaacgaagagaagcaaattcttcgggaaatcaaacaactcgaaggaacaagggaagatgttaaaaaggttgctgctgcaagggcacaaattcatgagacgatgggtgaaaaagaatcaatccagaaccaggtcaaacttatgaatgttggcttggatggagttcgtaaggggcaacaggaagttaagggcaggcttaagataatagatgatcagattgatgccataaacaaacagatcggcatattggatgaggaattgaagggcgttgtggagaagagggacaagacttatgaacatattctggaattgagaaaactgcgtgaagaagggaattcttctttctaccaaaactccaacgtgttgcacaaagtgaaacaacttgctgatcaaaaggatgttggagcccttaaagagctctcagttacagaggtcgacaagttcatttctctttggtgtggtagtaagtcttttagagatgactatgagaagagactcttgcagtcgcttgata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="28804" stop="31249"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29104" g_stop="29247" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="144" r_length="144" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29370" g_stop="29549" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="324" r_length="180" r_score="0.961"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29550" i_stop="29675" i_length="126">
            <donor d_prob="0.985" d_score="0.94"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29676" g_stop="29870" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="325" r_stop="519" r_length="195" r_score="0.974"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29871" i_stop="30693" i_length="823">
            <donor d_prob="0.773" d_score="0.98"/>
            <acceptor a_prob="0.475" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30694" g_stop="30792" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="520" r_stop="618" r_length="99" r_score="0.970"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="30793" i_stop="30867" i_length="75">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="30868" g_stop="30949" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="619" r_stop="700" r_length="82" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E451181" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>700</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E451181" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29104" e_stop="29247"/>
          <exon e_start="29370" e_stop="29549"/>
          <exon e_start="29676" e_stop="29870"/>
          <exon e_start="30694" e_stop="30792"/>
          <exon e_start="30868" e_stop="30949"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAAGTAAGGCCTTTATGTTATGTTTCTCTTATACAGATGCAAATATTTAGGTTTCATGGCTGTATCGTATCATGTGAGTTTGCTGTGATCTGCATATGATAACTGCTAACCTGCCGCTGGTATTTGTAGCTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGGGTATGCTGCTGCTTCCTGTCTTACTATTTTGGTTAAAAAAAGGGTTCATGGTATATGTTATGCTCAAATTAAATCCAATTAAAACAAAAAAAGATTCAATCCCATTGTTTTCCTTCGGTGAATCATCAACAATCAATTACATACGAGATGCTTCAATTACTGTGCTTCTACTTGTTACTGTTCTGATGATGCCATATGCTACCCATATATGGTCTATTGATCTATCTGTTTCCATGTTTGATTACATGTTTTTGTTGTGTTGTGTTGTCCTGTATCTTTGTAGTTGCCTTATGTGTAGGAATTTTATGAGTGATCAGAAAAATTTCTCCGTCGTCTACACTATTTTTTGTTAGGAGAGCAGGTAGAAACATTTCATTACTGGTCTAGATACATGCTTCACGGGCGCTGGTAAGTGACATGATGGTTGCCTGGAATTTTATAGTAATGACGACTTCTGGTTTTGCTCATGTATATTTGATTTCTAACTTGCTAGTGTCTTTCGTGTATATTTGACTGAGTACCGCAACTGTCCTTGGTAACTAACAGCTTCTAGAGACACACCCAAAAAGAAAAAATAACAGTTAAAAGGATGGCAGCTGAGAGGTAAGGAAGGTTGCTCTTCCTAAAAAGGAATAGAAAACAGTAGGAAATTTTACATCTCAAGGGAGAAGCCAGTTGATTTGTTTATGTCAACTCTCTGAAATCTTTCACGGGCGCTATTATCTTTAAAAAAATTGAAATGTTTTTTTTGATTACTGCAGTGTCAAGAGAAATAGTCTCTAAACTTATGTAGTCTTTATAACCAATTTCCTGCAATTTTCAGAATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAGGTATGATGTATTTTTCACCGGTAGTTGTTATATTTATGTGTTTGGTATTGACAACCATCTTTTTTCTTTCACTAGGTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATA</genome_strand>
        <mrna_strand>AAGGAATTTTGGAGTGCTATTGATGGTAAGATAAAGGAAATGGTACCTCTGCATGAGGCCCTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT..........................................................................................................................ATTAAGGGTCTGCAGTACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTCGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGGGCACAAATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAACCAGGTCAAA..............................................................................................................................CTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGGCAACAGGAAGTTAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGCATATTGGATGAGGAATTGAAGGGCGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACTGCGTGAAGAAGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTTCTTTCTACCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGATCAAAAGGATGTTGGAGCCCTTAAAGAGCTCTCAGTTACAGAG...........................................................................GTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAAGAGACTCTTGCAGTCGCTTGATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E585043" ref_strand="+" ref_description="SGN-E585043 [66761]">
      <seq>ggtacctctgcatgaggccctgggccagctccgcggttctaggaatgcaggccgagagaggggtcctacagtgtgttcatctgaggaggagctcaatcatcttattaagggtctgcagtaccgcattcagcatgaaagcattcctctgaatgaagagaagcaaattcttcgggaaatcaaacaacttgaaggaacaagggaagatgttaaaaaggttgctgctgcaagggcacaaattcatgagacgatgggtgaaaaagaatcaatccagaaccaggtcaaacttatgaatgttggcttggatggagttcgtaaggggcaacaggaagttaagggcaggcttaagataatagatgatcagattgatgccataaacaaacagatcggcatattggatgaggaattgaagggcgttgtggagaagagggacaagacttatgaacatattctggaattgagaaaactgcgcgaagaagggaattcttctttctaccaaaactccaacgtgttgcacaaagtgaaacaacttgctgatcaaaaggatgttggagcccttaaagagctctcagttacagaggtcgacaagttcatttctctttggtgtggtagtaaatcttttagagatgactatgagaggagactcttgcagtcgcttgatattaggcagctgagcagggatggcaggatgaggaatcctggtgaaaagccacttgtgttaccagaagcacctactgtctcccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="28845" stop="31331"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29145" g_stop="29247" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="103" r_length="103" r_score="0.971"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29370" g_stop="29549" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="104" r_stop="283" r_length="180" r_score="0.961"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29550" i_stop="29675" i_length="126">
            <donor d_prob="0.985" d_score="0.94"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29676" g_stop="29870" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="478" r_length="195" r_score="0.969"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29871" i_stop="30693" i_length="823">
            <donor d_prob="0.773" d_score="0.96"/>
            <acceptor a_prob="0.475" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30694" g_stop="30792" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="479" r_stop="577" r_length="99" r_score="0.970"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="30793" i_stop="30867" i_length="75">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.967" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="30868" g_stop="31031" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="578" r_stop="741" r_length="164" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E585043" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>741</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E585043" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29145" e_stop="29247"/>
          <exon e_start="29370" e_stop="29549"/>
          <exon e_start="29676" e_stop="29870"/>
          <exon e_start="30694" e_stop="30792"/>
          <exon e_start="30868" e_stop="31031"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAAGTAAGGCCTTTATGTTATGTTTCTCTTATACAGATGCAAATATTTAGGTTTCATGGCTGTATCGTATCATGTGAGTTTGCTGTGATCTGCATATGATAACTGCTAACCTGCCGCTGGTATTTGTAGCTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGGGTATGCTGCTGCTTCCTGTCTTACTATTTTGGTTAAAAAAAGGGTTCATGGTATATGTTATGCTCAAATTAAATCCAATTAAAACAAAAAAAGATTCAATCCCATTGTTTTCCTTCGGTGAATCATCAACAATCAATTACATACGAGATGCTTCAATTACTGTGCTTCTACTTGTTACTGTTCTGATGATGCCATATGCTACCCATATATGGTCTATTGATCTATCTGTTTCCATGTTTGATTACATGTTTTTGTTGTGTTGTGTTGTCCTGTATCTTTGTAGTTGCCTTATGTGTAGGAATTTTATGAGTGATCAGAAAAATTTCTCCGTCGTCTACACTATTTTTTGTTAGGAGAGCAGGTAGAAACATTTCATTACTGGTCTAGATACATGCTTCACGGGCGCTGGTAAGTGACATGATGGTTGCCTGGAATTTTATAGTAATGACGACTTCTGGTTTTGCTCATGTATATTTGATTTCTAACTTGCTAGTGTCTTTCGTGTATATTTGACTGAGTACCGCAACTGTCCTTGGTAACTAACAGCTTCTAGAGACACACCCAAAAAGAAAAAATAACAGTTAAAAGGATGGCAGCTGAGAGGTAAGGAAGGTTGCTCTTCCTAAAAAGGAATAGAAAACAGTAGGAAATTTTACATCTCAAGGGAGAAGCCAGTTGATTTGTTTATGTCAACTCTCTGAAATCTTTCACGGGCGCTATTATCTTTAAAAAAATTGAAATGTTTTTTTTGATTACTGCAGTGTCAAGAGAAATAGTCTCTAAACTTATGTAGTCTTTATAACCAATTTCCTGCAATTTTCAGAATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAGGTATGATGTATTTTTCACCGGTAGTTGTTATATTTATGTGTTTGGTATTGACAACCATCTTTTTTCTTTCACTAGGTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCG</genome_strand>
        <mrna_strand>GGTACCTCTGCATGAGGCCCTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT..........................................................................................................................ATTAAGGGTCTGCAGTACCGCATTCAGCATGAAAGCATTCCTCTGAATGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGGGCACAAATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAACCAGGTCAAA..............................................................................................................................CTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGGCAACAGGAAGTTAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGCATATTGGATGAGGAATTGAAGGGCGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACTGCGCGAAGAAGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTTCTTTCTACCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGATCAAAAGGATGTTGGAGCCCTTAAAGAGCTCTCAGTTACAGAG...........................................................................GTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAATCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGATGGCAGGATGAGGAATCCTGGTGAAAAGCCACTTGTGTTACCAGAAGCACCTACTGTCTCCCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E482313" ref_strand="+" ref_description="SGN-E482313 [cSTD-21-F12]">
      <seq>ccctgggccagctccgcggttctaggaatgcaggccgagagaggggtcctacagtgtgttcatctgaggaggagctcaatcatcttattaagggtctgcagtaccgcattcagcatgaaagcattcctctgaacgaagagaagcaaattcttcgggaaatcaaacaactcgaaggaacaagggaagatgttaaaaaggttgctgctgcaagggcacaaattcatgagacgatgggtgaaaaagaatcaatccagaaccaggtcaaacttatgaatgttggcttggatggagttcgtaaggggcaacaggaagttaagggcaggcttaagataatagatgatcagattgatgccataaacaaacagatcggcatattggatgaggaattgaagggcgttgtggagaagagggacaagacttatgaacatattctggaattgagaaaactgcgtgaaagaaggaattcttctttctaccaaactccaacgtgttgcacaaagtgaaacaacttgctgatcaaaaggatgttggagcccttaaagagctctcagttacagaggtcgacaagttcatttctctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="28865" stop="31188"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29162" g_stop="29247" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="86" r_length="86" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29370" g_stop="29549" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="87" r_stop="266" r_length="180" r_score="0.961"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29550" i_stop="29675" i_length="126">
            <donor d_prob="0.985" d_score="0.94"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29676" g_stop="29870" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="461" r_length="195" r_score="0.959"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29871" i_stop="30693" i_length="823">
            <donor d_prob="0.773" d_score="0.92"/>
            <acceptor a_prob="0.475" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30694" g_stop="30792" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="462" r_stop="559" r_length="98" r_score="0.960"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="30793" i_stop="30867" i_length="75">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.967" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="30868" g_stop="30888" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="560" r_stop="580" r_length="21" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E482313" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>581</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E482313" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29162" e_stop="29247"/>
          <exon e_start="29370" e_stop="29549"/>
          <exon e_start="29676" e_stop="29870"/>
          <exon e_start="30694" e_stop="30792"/>
          <exon e_start="30868" e_stop="30888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAAGTAAGGCCTTTATGTTATGTTTCTCTTATACAGATGCAAATATTTAGGTTTCATGGCTGTATCGTATCATGTGAGTTTGCTGTGATCTGCATATGATAACTGCTAACCTGCCGCTGGTATTTGTAGCTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGGGTATGCTGCTGCTTCCTGTCTTACTATTTTGGTTAAAAAAAGGGTTCATGGTATATGTTATGCTCAAATTAAATCCAATTAAAACAAAAAAAGATTCAATCCCATTGTTTTCCTTCGGTGAATCATCAACAATCAATTACATACGAGATGCTTCAATTACTGTGCTTCTACTTGTTACTGTTCTGATGATGCCATATGCTACCCATATATGGTCTATTGATCTATCTGTTTCCATGTTTGATTACATGTTTTTGTTGTGTTGTGTTGTCCTGTATCTTTGTAGTTGCCTTATGTGTAGGAATTTTATGAGTGATCAGAAAAATTTCTCCGTCGTCTACACTATTTTTTGTTAGGAGAGCAGGTAGAAACATTTCATTACTGGTCTAGATACATGCTTCACGGGCGCTGGTAAGTGACATGATGGTTGCCTGGAATTTTATAGTAATGACGACTTCTGGTTTTGCTCATGTATATTTGATTTCTAACTTGCTAGTGTCTTTCGTGTATATTTGACTGAGTACCGCAACTGTCCTTGGTAACTAACAGCTTCTAGAGACACACCCAAAAAGAAAAAATAACAGTTAAAAGGATGGCAGCTGAGAGGTAAGGAAGGTTGCTCTTCCTAAAAAGGAATAGAAAACAGTAGGAAATTTTACATCTCAAGGGAGAAGCCAGTTGATTTGTTTATGTCAACTCTCTGAAATCTTTCACGGGCGCTATTATCTTTAAAAAAATTGAAATGTTTTTTTTGATTACTGCAGTGTCAAGAGAAATAGTCTCTAAACTTATGTAGTCTTTATAACCAATTTCCTGCAATTTTCAGAATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAGGTATGATGTATTTTTCACCGGTAGTTGTTATATTTATGTGTTTGGTATTGACAACCATCTTTTTTCTTTCACTAGGTCGACAAGTTCATTTCTCTT</genome_strand>
        <mrna_strand>CCCTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT..........................................................................................................................ATTAAGGGTCTGCAGTACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTCGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGGGCACAAATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAACCAGGTCAAA..............................................................................................................................CTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGGCAACAGGAAGTTAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGCATATTGGATGAGGAATTGAAGGGCGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACTGCGTGAAAGAAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTTCTTTCTA-CCAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGATCAAAAGGATGTTGGAGCCCTTAAAGAGCTCTCAGTTACAGAG...........................................................................GTCGACAAGTTCATTTCTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E478689" ref_strand="+" ref_description="SGN-E478689 [cSTD-6-H21]">
      <seq>cgcggttctaggaatgcaggccgagagaggggtcctacagtgtgttcatctgaggaggagctcaatcatcttattaagggtctgcaataccgcattcagcatgaaagcattcctctgaacgaagagaagcaaattcttcgggaaatcaaacaacttgaaggaacaagggaagatgttaaaaaggttgctgctgcaagggcacaaattcatgagacgatgggtgaaaaagaatcaatccagaaccaggtcaaacttatgaatgttggcttggatggagttcgtaaggggcaacaggaagttaagggcaggcttaagataatagatgatcagattgatgccataaacaaacagatcggcatattggatgaggaattgaagggtgttgtggagaagagggacaagacttatgaacatattctggaattgagaaaactgcgtgaagaagggaattcttctttctaccaaaactccaacgtgttgcacaaagtgaaacaacttgctgatcaaaaggatgttggagcccttaaagagctctcagttacagaggtcgacaagttcatttctctttggtgtggtagcaagtcttttagagatgactatgagatgagactcttgcagtcgcttgatattaggcagctgagcagggacggcaggatgaggaatcctggtgaaagccacctggtgttaccaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="28876" stop="31313"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29176" g_stop="29247" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="72" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29370" g_stop="29549" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="73" r_stop="252" r_length="180" r_score="0.972"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29550" i_stop="29675" i_length="126">
            <donor d_prob="0.985" d_score="0.94"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29676" g_stop="29870" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="253" r_stop="447" r_length="195" r_score="0.969"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29871" i_stop="30693" i_length="823">
            <donor d_prob="0.773" d_score="0.98"/>
            <acceptor a_prob="0.475" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30694" g_stop="30792" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="448" r_stop="546" r_length="99" r_score="0.970"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="30793" i_stop="30867" i_length="75">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.967" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="30868" g_stop="31013" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="547" r_stop="692" r_length="146" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E478689" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>692</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E478689" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29176" e_stop="29247"/>
          <exon e_start="29370" e_stop="29549"/>
          <exon e_start="29676" e_stop="29870"/>
          <exon e_start="30694" e_stop="30792"/>
          <exon e_start="30868" e_stop="31013"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAAGTAAGGCCTTTATGTTATGTTTCTCTTATACAGATGCAAATATTTAGGTTTCATGGCTGTATCGTATCATGTGAGTTTGCTGTGATCTGCATATGATAACTGCTAACCTGCCGCTGGTATTTGTAGCTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGGGTATGCTGCTGCTTCCTGTCTTACTATTTTGGTTAAAAAAAGGGTTCATGGTATATGTTATGCTCAAATTAAATCCAATTAAAACAAAAAAAGATTCAATCCCATTGTTTTCCTTCGGTGAATCATCAACAATCAATTACATACGAGATGCTTCAATTACTGTGCTTCTACTTGTTACTGTTCTGATGATGCCATATGCTACCCATATATGGTCTATTGATCTATCTGTTTCCATGTTTGATTACATGTTTTTGTTGTGTTGTGTTGTCCTGTATCTTTGTAGTTGCCTTATGTGTAGGAATTTTATGAGTGATCAGAAAAATTTCTCCGTCGTCTACACTATTTTTTGTTAGGAGAGCAGGTAGAAACATTTCATTACTGGTCTAGATACATGCTTCACGGGCGCTGGTAAGTGACATGATGGTTGCCTGGAATTTTATAGTAATGACGACTTCTGGTTTTGCTCATGTATATTTGATTTCTAACTTGCTAGTGTCTTTCGTGTATATTTGACTGAGTACCGCAACTGTCCTTGGTAACTAACAGCTTCTAGAGACACACCCAAAAAGAAAAAATAACAGTTAAAAGGATGGCAGCTGAGAGGTAAGGAAGGTTGCTCTTCCTAAAAAGGAATAGAAAACAGTAGGAAATTTTACATCTCAAGGGAGAAGCCAGTTGATTTGTTTATGTCAACTCTCTGAAATCTTTCACGGGCGCTATTATCTTTAAAAAAATTGAAATGTTTTTTTTGATTACTGCAGTGTCAAGAGAAATAGTCTCTAAACTTATGTAGTCTTTATAACCAATTTCCTGCAATTTTCAGAATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAGGTATGATGTATTTTTCACCGGTAGTTGTTATATTTATGTGTTTGGTATTGACAACCATCTTTTTTCTTTCACTAGGTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGA</genome_strand>
        <mrna_strand>CGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT..........................................................................................................................ATTAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGGGCACAAATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAACCAGGTCAAA..............................................................................................................................CTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGGCAACAGGAAGTTAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGCATATTGGATGAGGAATTGAAGGGTGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACTGCGTGAAGAAGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTTCTTTCTACCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGATCAAAAGGATGTTGGAGCCCTTAAAGAGCTCTCAGTTACAGAG...........................................................................GTCGACAAGTTCATTTCTCTTTGGTGTGGTAGCAAGTCTTTTAGAGATGACTATGAGATGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGGTGAAAGCCACCTGGTGTTACCAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E450805" ref_strand="+" ref_description="SGN-E450805 [cSTS-10-D9]">
      <seq>aggggtcctacagtgtgttcatctgaggaggagctcaatcatcttattaagggtctgcaataccgcattcagcatgaaagcattcctctgaacgaagagaagcaaattcttcgggaaatcaaacaacttgaaggaacaagggaagatgttaaaaaggttgctgctgcaagggcacaaattcatgagacgatgggtgaaaaagaatcaatccagaaccaggtcaaacttatgaatgttggcttggatggagttcgtaaggggcaacaggaagttaagggcaggcttaagataatagatgatcagattgatgccataaacaaacagatcggcatattggatgaggaattgaacggtgttgtggagaagagggacaagacttatgaacatattctggaattgagaaaactgcgtgaagaagggaattcttctttctaccaaaactccaacgtgttgcacaaagtgaaacaacttgctgatcaaaatgatgttggagcccttaaagagctctcagttacagaggtcgacaagttcatttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="28903" stop="31094"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29203" g_stop="29247" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="45" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29370" g_stop="29549" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="46" r_stop="225" r_length="180" r_score="0.972"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29550" i_stop="29675" i_length="126">
            <donor d_prob="0.985" d_score="0.94"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29676" g_stop="29870" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="226" r_stop="420" r_length="195" r_score="0.964"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29871" i_stop="30693" i_length="823">
            <donor d_prob="0.773" d_score="0.98"/>
            <acceptor a_prob="0.475" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30694" g_stop="30792" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="519" r_length="99" r_score="0.960"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="30793" i_stop="30867" i_length="75">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.967" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="30868" g_stop="30884" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="520" r_stop="536" r_length="17" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E450805" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E450805" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29203" e_stop="29247"/>
          <exon e_start="29370" e_stop="29549"/>
          <exon e_start="29676" e_stop="29870"/>
          <exon e_start="30694" e_stop="30792"/>
          <exon e_start="30868" e_stop="30884"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAAGTAAGGCCTTTATGTTATGTTTCTCTTATACAGATGCAAATATTTAGGTTTCATGGCTGTATCGTATCATGTGAGTTTGCTGTGATCTGCATATGATAACTGCTAACCTGCCGCTGGTATTTGTAGCTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGGGTATGCTGCTGCTTCCTGTCTTACTATTTTGGTTAAAAAAAGGGTTCATGGTATATGTTATGCTCAAATTAAATCCAATTAAAACAAAAAAAGATTCAATCCCATTGTTTTCCTTCGGTGAATCATCAACAATCAATTACATACGAGATGCTTCAATTACTGTGCTTCTACTTGTTACTGTTCTGATGATGCCATATGCTACCCATATATGGTCTATTGATCTATCTGTTTCCATGTTTGATTACATGTTTTTGTTGTGTTGTGTTGTCCTGTATCTTTGTAGTTGCCTTATGTGTAGGAATTTTATGAGTGATCAGAAAAATTTCTCCGTCGTCTACACTATTTTTTGTTAGGAGAGCAGGTAGAAACATTTCATTACTGGTCTAGATACATGCTTCACGGGCGCTGGTAAGTGACATGATGGTTGCCTGGAATTTTATAGTAATGACGACTTCTGGTTTTGCTCATGTATATTTGATTTCTAACTTGCTAGTGTCTTTCGTGTATATTTGACTGAGTACCGCAACTGTCCTTGGTAACTAACAGCTTCTAGAGACACACCCAAAAAGAAAAAATAACAGTTAAAAGGATGGCAGCTGAGAGGTAAGGAAGGTTGCTCTTCCTAAAAAGGAATAGAAAACAGTAGGAAATTTTACATCTCAAGGGAGAAGCCAGTTGATTTGTTTATGTCAACTCTCTGAAATCTTTCACGGGCGCTATTATCTTTAAAAAAATTGAAATGTTTTTTTTGATTACTGCAGTGTCAAGAGAAATAGTCTCTAAACTTATGTAGTCTTTATAACCAATTTCCTGCAATTTTCAGAATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAGGTATGATGTATTTTTCACCGGTAGTTGTTATATTTATGTGTTTGGTATTGACAACCATCTTTTTTCTTTCACTAGGTCGACAAGTTCATTTC</genome_strand>
        <mrna_strand>AGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT..........................................................................................................................ATTAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGGGCACAAATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAACCAGGTCAAA..............................................................................................................................CTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGGCAACAGGAAGTTAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGCATATTGGATGAGGAATTGAACGGTGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACTGCGTGAAGAAGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTTCTTTCTACCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGATCAAAATGATGTTGGAGCCCTTAAAGAGCTCTCAGTTACAGAG...........................................................................GTCGACAAGTTCATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E476914" ref_strand="+" ref_description="SGN-E476914 [cSTB-46-D7]">
      <seq>gtcctacagtgtgttcatctgaggaggagctcaatcatcttattaagggtctgcagtaccgcattcagcatgaaagcattcctctgaacgaagagaagcaaattcttcgggaaatcaaacaactcgaaggaacaagggaagatgttaaaaaggttgctgctgcaagggcacaaattcatgagacgatgggtgaaaaagaatcaatccagaaccaggtcaaacttatgaatgttggcttggatggagttcgtaaggggcaacaggaagttaagggcaggcttaagataatagatgatcagattgatgccataaacaaacagatcggcatattggatgaggaattgaagggcgttgtggagaagagggacaagacttatgaacatattctggaattgagaaaactgcgtgaagaaaggaattcttctttctaccaaaactccaacgtgttgcacaaagtgaaacaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="28907" stop="31042"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29207" g_stop="29247" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="41" r_length="41" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29370" g_stop="29549" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="221" r_length="180" r_score="0.961"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29550" i_stop="29675" i_length="126">
            <donor d_prob="0.985" d_score="0.94"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29676" g_stop="29870" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="416" r_length="195" r_score="0.969"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29871" i_stop="30693" i_length="823">
            <donor d_prob="0.773" d_score="0.96"/>
            <acceptor a_prob="0.475" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30694" g_stop="30742" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="417" r_stop="465" r_length="49" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E476914" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>465</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E476914" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29207" e_stop="29247"/>
          <exon e_start="29370" e_stop="29549"/>
          <exon e_start="29676" e_stop="29870"/>
          <exon e_start="30694" e_stop="30742"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAAGTAAGGCCTTTATGTTATGTTTCTCTTATACAGATGCAAATATTTAGGTTTCATGGCTGTATCGTATCATGTGAGTTTGCTGTGATCTGCATATGATAACTGCTAACCTGCCGCTGGTATTTGTAGCTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGGGTATGCTGCTGCTTCCTGTCTTACTATTTTGGTTAAAAAAAGGGTTCATGGTATATGTTATGCTCAAATTAAATCCAATTAAAACAAAAAAAGATTCAATCCCATTGTTTTCCTTCGGTGAATCATCAACAATCAATTACATACGAGATGCTTCAATTACTGTGCTTCTACTTGTTACTGTTCTGATGATGCCATATGCTACCCATATATGGTCTATTGATCTATCTGTTTCCATGTTTGATTACATGTTTTTGTTGTGTTGTGTTGTCCTGTATCTTTGTAGTTGCCTTATGTGTAGGAATTTTATGAGTGATCAGAAAAATTTCTCCGTCGTCTACACTATTTTTTGTTAGGAGAGCAGGTAGAAACATTTCATTACTGGTCTAGATACATGCTTCACGGGCGCTGGTAAGTGACATGATGGTTGCCTGGAATTTTATAGTAATGACGACTTCTGGTTTTGCTCATGTATATTTGATTTCTAACTTGCTAGTGTCTTTCGTGTATATTTGACTGAGTACCGCAACTGTCCTTGGTAACTAACAGCTTCTAGAGACACACCCAAAAAGAAAAAATAACAGTTAAAAGGATGGCAGCTGAGAGGTAAGGAAGGTTGCTCTTCCTAAAAAGGAATAGAAAACAGTAGGAAATTTTACATCTCAAGGGAGAAGCCAGTTGATTTGTTTATGTCAACTCTCTGAAATCTTTCACGGGCGCTATTATCTTTAAAAAAATTGAAATGTTTTTTTTGATTACTGCAGTGTCAAGAGAAATAGTCTCTAAACTTATGTAGTCTTTATAACCAATTTCCTGCAATTTTCAGAATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAAC</genome_strand>
        <mrna_strand>GTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT..........................................................................................................................ATTAAGGGTCTGCAGTACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTCGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGGGCACAAATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAACCAGGTCAAA..............................................................................................................................CTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGGCAACAGGAAGTTAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGCATATTGGATGAGGAATTGAAGGGCGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACTGCGTGAAGAAAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTTCTTTCTACCAAAACTCCAACGTGTTGCACAAAGTGAAACAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E331902" ref_strand="+" ref_description="SGN-E331902 [cTOD-16-C3]">
      <seq>tgaggaggagctcaatcatcttatcaagggtctgcaataccgcattcaacatgaaagcattcctctgaacgaagagaagcaaattcttcgggaaatcaaacaacttgaaggaacaagggaagatgttaaaaaggttgctgctgcaagagcacagattcatgagacgatgggtgaaaaagaatcaatccagagtcaggtcaaacttatgaatgttggcttggatggagttcgtaagggacaacaggaagtcaagggcaggcttaagataatagatgatcagattgatgccataaacaaacagatcggtatattggatgaggaattgaaggacgttgtggagaagagggacaagacttatgaacatattctggaattgagaaaacagcgtgaagaagggaattcttctttctatcaaaactccaacgtgttgcacaaagtgaaacaacttgctgaccaaaaggatgttggagcccttaaagagctttcagttacagaggtcgacaagttcatttctctttggtgtggtagtaagtcttttagagatgactatgagaggagactcttgcagtcgcttgatattaggcagctgagcacggacggcaggatgatgaatcctgatgatagccactggtgttaccagaagcacctactgtctcccgtgctgaagtccagcaagagctaatgcaaaaaccgttaaggaagatcatgcacccgttgatgctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="28926" stop="31397"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29226" g_stop="29247" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="22" r_length="22" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29370" g_stop="29549" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="23" r_stop="202" r_length="180" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29550" i_stop="29675" i_length="126">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29676" g_stop="29870" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="203" r_stop="397" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29871" i_stop="30693" i_length="823">
            <donor d_prob="0.773" d_score="1.00"/>
            <acceptor a_prob="0.475" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30694" g_stop="30792" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="398" r_stop="496" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="30793" i_stop="30867" i_length="75">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="30868" g_stop="31097" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="497" r_stop="724" r_length="228" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E331902" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>726</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E331902" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29226" e_stop="29247"/>
          <exon e_start="29370" e_stop="29549"/>
          <exon e_start="29676" e_stop="29870"/>
          <exon e_start="30694" e_stop="30792"/>
          <exon e_start="30868" e_stop="31097"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGGAGGAGCTCAATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAAGTAAGGCCTTTATGTTATGTTTCTCTTATACAGATGCAAATATTTAGGTTTCATGGCTGTATCGTATCATGTGAGTTTGCTGTGATCTGCATATGATAACTGCTAACCTGCCGCTGGTATTTGTAGCTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGGGTATGCTGCTGCTTCCTGTCTTACTATTTTGGTTAAAAAAAGGGTTCATGGTATATGTTATGCTCAAATTAAATCCAATTAAAACAAAAAAAGATTCAATCCCATTGTTTTCCTTCGGTGAATCATCAACAATCAATTACATACGAGATGCTTCAATTACTGTGCTTCTACTTGTTACTGTTCTGATGATGCCATATGCTACCCATATATGGTCTATTGATCTATCTGTTTCCATGTTTGATTACATGTTTTTGTTGTGTTGTGTTGTCCTGTATCTTTGTAGTTGCCTTATGTGTAGGAATTTTATGAGTGATCAGAAAAATTTCTCCGTCGTCTACACTATTTTTTGTTAGGAGAGCAGGTAGAAACATTTCATTACTGGTCTAGATACATGCTTCACGGGCGCTGGTAAGTGACATGATGGTTGCCTGGAATTTTATAGTAATGACGACTTCTGGTTTTGCTCATGTATATTTGATTTCTAACTTGCTAGTGTCTTTCGTGTATATTTGACTGAGTACCGCAACTGTCCTTGGTAACTAACAGCTTCTAGAGACACACCCAAAAAGAAAAAATAACAGTTAAAAGGATGGCAGCTGAGAGGTAAGGAAGGTTGCTCTTCCTAAAAAGGAATAGAAAACAGTAGGAAATTTTACATCTCAAGGGAGAAGCCAGTTGATTTGTTTATGTCAACTCTCTGAAATCTTTCACGGGCGCTATTATCTTTAAAAAAATTGAAATGTTTTTTTTGATTACTGCAGTGTCAAGAGAAATAGTCTCTAAACTTATGTAGTCTTTATAACCAATTTCCTGCAATTTTCAGAATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAGGTATGATGTATTTTTCACCGGTAGTTGTTATATTTATGTGTTTGGTATTGACAACCATCTTTTTTCTTTCACTAGGTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGC</genome_strand>
        <mrna_strand>TGAGGAGGAGCTCAATCATCTT..........................................................................................................................ATCAAGGGTCTGCAATACCGCATTCAACATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAA..............................................................................................................................CTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAG...........................................................................GTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCACGGACGGCAGGATGATGAATCCTGATG-ATAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAG-TCCAGCAAGAGCTAATGCAAAAACCGTTAAGGAAGATCATGCACCCGTTGATGCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E584113" ref_strand="+" ref_description="SGN-E584113 [9934]">
      <seq>aatcatcttattaagggtctgcagtaccgcatgcagcatgaaagcattcctctgaacgaagagaagcaaattcttcgggaaatcaaacaactcgaaggaacaatggaagatgttaaaaaggttgctgctgcaagggcacaaattcatgagacgatgggtgaaaaagaatcaatcgagaaccaggtcaaacttatgaatgttggcttggatgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="29070" stop="29999"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29239" g_stop="29247" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="9" r_length="9" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.991" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29370" g_stop="29549" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="189" r_length="180" r_score="0.944"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29550" i_stop="29675" i_length="126">
            <donor d_prob="0.985" d_score="0.92"/>
            <acceptor a_prob="0.997" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29676" g_stop="29699" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="213" r_length="24" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E584113" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>213</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E584113" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29239" e_stop="29247"/>
          <exon e_start="29370" e_stop="29549"/>
          <exon e_start="29676" e_stop="29699"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAAGTAAGGCCTTTATGTTATGTTTCTCTTATACAGATGCAAATATTTAGGTTTCATGGCTGTATCGTATCATGTGAGTTTGCTGTGATCTGCATATGATAACTGCTAACCTGCCGCTGGTATTTGTAGCTTATGAATGTTGGCTTGGATGGA</genome_strand>
        <mrna_strand>AATCATCTT..........................................................................................................................ATTAAGGGTCTGCAGTACCGCATGCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTCGAAGGAACAATGGAAGATGTTAAAAAGGTTGCTGCTGCAAGGGCACAAATTCATGAGACGATGGGTGAAAAAGAATCAATCGAGAACCAGGTCAAA..............................................................................................................................CTTATGAATGTTGGCTTGGATGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E478200" ref_strand="+" ref_description="SGN-E478200 [cSTD-3-J9]">
      <seq>atcttattaagggtctgcaataccgcattcagcatgaaagcattcctctgaacgaagagaagcaaattcttcgggaaatcaaacaacttgaaggaacaagggaagatgttaaaaaggttgctgctgcaagggcacaaattcatgagacgatgggtgaaaaagaatcaatccagaaccaggtcaaacttatgaatgttggcttggatggagttcgtaaggggcaacaggaagttaagggcaggcttaagataatagatgatcagattgatgccataaacaaacagatcggcatattggatgaggaattgaagggtgttgtggagaagagggacaagacttatgaacatattctggaattgagaaaactgcgtgaagaagggaattcttctttctaccaaaactccaacgtgttgcacaaagtgaaacaacttgctgatcaaaaggatgttggagcccttaaagagctctcagttacagaggtcgacaagttcatttctctttggtgtggtagcaagtcttttagagatgactatgagatgagactcttgcagtcgcttgatattaggcagctgagcagggacggcaggatgaggaatcctggtgaaaagccactggtgttaccagaagcacctaccgtctnccgtgctgaagttccagcaagagctaatgcaaaacccgttaaggaagatcatgcacccgttgatgctgctccgattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="29070" stop="31405"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29243" g_stop="29247" g_length="5"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="5" r_length="5" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29370" g_stop="29549" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="6" r_stop="185" r_length="180" r_score="0.972"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29550" i_stop="29675" i_length="126">
            <donor d_prob="0.985" d_score="0.94"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29676" g_stop="29870" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="380" r_length="195" r_score="0.969"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29871" i_stop="30693" i_length="823">
            <donor d_prob="0.773" d_score="0.98"/>
            <acceptor a_prob="0.475" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30694" g_stop="30792" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="381" r_stop="479" r_length="99" r_score="0.970"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="30793" i_stop="30867" i_length="75">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.967" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="30868" g_stop="31105" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="480" r_stop="717" r_length="238" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E478200" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>717</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E478200" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29243" e_stop="29247"/>
          <exon e_start="29370" e_stop="29549"/>
          <exon e_start="29676" e_stop="29870"/>
          <exon e_start="30694" e_stop="30792"/>
          <exon e_start="30868" e_stop="31105"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTTGTAAGCACTCGTTTATAACTTTACTTAATTGGTTTGTTTTGTCATTATTTGCATTCATTCCTTTATTTCATATCGTACACAAACAATGATAATATGACATTTTCATTCTGGCAACTTTGTAGATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAAGTAAGGCCTTTATGTTATGTTTCTCTTATACAGATGCAAATATTTAGGTTTCATGGCTGTATCGTATCATGTGAGTTTGCTGTGATCTGCATATGATAACTGCTAACCTGCCGCTGGTATTTGTAGCTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGGGTATGCTGCTGCTTCCTGTCTTACTATTTTGGTTAAAAAAAGGGTTCATGGTATATGTTATGCTCAAATTAAATCCAATTAAAACAAAAAAAGATTCAATCCCATTGTTTTCCTTCGGTGAATCATCAACAATCAATTACATACGAGATGCTTCAATTACTGTGCTTCTACTTGTTACTGTTCTGATGATGCCATATGCTACCCATATATGGTCTATTGATCTATCTGTTTCCATGTTTGATTACATGTTTTTGTTGTGTTGTGTTGTCCTGTATCTTTGTAGTTGCCTTATGTGTAGGAATTTTATGAGTGATCAGAAAAATTTCTCCGTCGTCTACACTATTTTTTGTTAGGAGAGCAGGTAGAAACATTTCATTACTGGTCTAGATACATGCTTCACGGGCGCTGGTAAGTGACATGATGGTTGCCTGGAATTTTATAGTAATGACGACTTCTGGTTTTGCTCATGTATATTTGATTTCTAACTTGCTAGTGTCTTTCGTGTATATTTGACTGAGTACCGCAACTGTCCTTGGTAACTAACAGCTTCTAGAGACACACCCAAAAAGAAAAAATAACAGTTAAAAGGATGGCAGCTGAGAGGTAAGGAAGGTTGCTCTTCCTAAAAAGGAATAGAAAACAGTAGGAAATTTTACATCTCAAGGGAGAAGCCAGTTGATTTGTTTATGTCAACTCTCTGAAATCTTTCACGGGCGCTATTATCTTTAAAAAAATTGAAATGTTTTTTTTGATTACTGCAGTGTCAAGAGAAATAGTCTCTAAACTTATGTAGTCTTTATAACCAATTTCCTGCAATTTTCAGAATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAGGTATGATGTATTTTTCACCGGTAGTTGTTATATTTATGTGTTTGGTATTGACAACCATCTTTTTTCTTTCACTAGGTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTC</genome_strand>
        <mrna_strand>ATCTT..........................................................................................................................ATTAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGGGCACAAATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAACCAGGTCAAA..............................................................................................................................CTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGGCAACAGGAAGTTAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGCATATTGGATGAGGAATTGAAGGGTGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACTGCGTGAAGAAGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTTCTTTCTACCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGATCAAAAGGATGTTGGAGCCCTTAAAGAGCTCTCAGTTACAGAG...........................................................................GTCGACAAGTTCATTTCTCTTTGGTGTGGTAGCAAGTCTTTTAGAGATGACTATGAGATGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGGTGAAAAGCCACTGGTGTTACCAGAAGCACCTACCGTCTNCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E457026" ref_strand="+" ref_description="SGN-E457026 [cPRO-2-M1]">
      <seq>aagagaagcaaattcttcgggaaatcaaacaactcgaaggaacaagggaagatgttaaaaaggttgctgctgcaagggcacaaattcatgagacgatgggtgaaaaagaatcaatccagaaccaggtcaaacttatgaatgttggcttggatggagttcgtaaggggcaacaggaagttaagggcaggcttaagataatagatgatcagattgatgccataaacaaacagatcggcatattggatgaggaattgaagggcgttgtggagaagagggacaagacttatgaacatattctggaattgagaaaactgcgtgaagaagggaattcttctttctaccaaaactccaacgtgttgcacaaagtgaaacaacttgctgatcaaaaggatgttggagcccttaaagagctctcagttacagaggtcgacaagttcatttctctttggtgtggtagtaagtcttttagagatgactatgagaagagactcttgcagtcgcttgatattaggcagctgagcagggacggcaggatgaggaatcctggtgaaaagccactggtgttaccagaagcacctactgtctcccgtgctgaagttccagcaagagctaatgcaaaacccgttaaggaagatcatgcacccgttgatgctgctccgattcagaaagaacagcaagagaagagtggcaagcagctgaatgatgctcatggtaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="29119" stop="31460"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29419" g_stop="29549" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="131" r_length="131" r_score="0.962"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29550" i_stop="29675" i_length="126">
            <donor d_prob="0.985" d_score="0.94"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29676" g_stop="29870" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="132" r_stop="326" r_length="195" r_score="0.974"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29871" i_stop="30693" i_length="823">
            <donor d_prob="0.773" d_score="0.98"/>
            <acceptor a_prob="0.475" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30694" g_stop="30792" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="327" r_stop="425" r_length="99" r_score="0.970"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="30793" i_stop="30867" i_length="75">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30868" g_stop="31160" g_length="293"/>
          <reference_exon_boundary r_type="cDNA" r_start="426" r_stop="718" r_length="293" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E457026" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>718</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E457026" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29419" e_stop="29549"/>
          <exon e_start="29676" e_stop="29870"/>
          <exon e_start="30694" e_stop="30792"/>
          <exon e_start="30868" e_stop="31160"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAAGTAAGGCCTTTATGTTATGTTTCTCTTATACAGATGCAAATATTTAGGTTTCATGGCTGTATCGTATCATGTGAGTTTGCTGTGATCTGCATATGATAACTGCTAACCTGCCGCTGGTATTTGTAGCTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGGGTATGCTGCTGCTTCCTGTCTTACTATTTTGGTTAAAAAAAGGGTTCATGGTATATGTTATGCTCAAATTAAATCCAATTAAAACAAAAAAAGATTCAATCCCATTGTTTTCCTTCGGTGAATCATCAACAATCAATTACATACGAGATGCTTCAATTACTGTGCTTCTACTTGTTACTGTTCTGATGATGCCATATGCTACCCATATATGGTCTATTGATCTATCTGTTTCCATGTTTGATTACATGTTTTTGTTGTGTTGTGTTGTCCTGTATCTTTGTAGTTGCCTTATGTGTAGGAATTTTATGAGTGATCAGAAAAATTTCTCCGTCGTCTACACTATTTTTTGTTAGGAGAGCAGGTAGAAACATTTCATTACTGGTCTAGATACATGCTTCACGGGCGCTGGTAAGTGACATGATGGTTGCCTGGAATTTTATAGTAATGACGACTTCTGGTTTTGCTCATGTATATTTGATTTCTAACTTGCTAGTGTCTTTCGTGTATATTTGACTGAGTACCGCAACTGTCCTTGGTAACTAACAGCTTCTAGAGACACACCCAAAAAGAAAAAATAACAGTTAAAAGGATGGCAGCTGAGAGGTAAGGAAGGTTGCTCTTCCTAAAAAGGAATAGAAAACAGTAGGAAATTTTACATCTCAAGGGAGAAGCCAGTTGATTTGTTTATGTCAACTCTCTGAAATCTTTCACGGGCGCTATTATCTTTAAAAAAATTGAAATGTTTTTTTTGATTACTGCAGTGTCAAGAGAAATAGTCTCTAAACTTATGTAGTCTTTATAACCAATTTCCTGCAATTTTCAGAATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAGGTATGATGTATTTTTCACCGGTAGTTGTTATATTTATGTGTTTGGTATTGACAACCATCTTTTTTCTTTCACTAGGTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAA</genome_strand>
        <mrna_strand>AAGAGAAGCAAATTCTTCGGGAAATCAAACAACTCGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGGGCACAAATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAACCAGGTCAAA..............................................................................................................................CTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGGCAACAGGAAGTTAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGCATATTGGATGAGGAATTGAAGGGCGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACTGCGTGAAGAAGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTTCTTTCTACCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGATCAAAAGGATGTTGGAGCCCTTAAAGAGCTCTCAGTTACAGAG...........................................................................GTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAAGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGGTGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGAAGAGTGGCAAGCAGCTGAATGATGCTCATGGTAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E411748" ref_strand="+" ref_description="SGN-E411748 [STM-15-O3]">
      <seq>aaattcttcgggaaatcaaacaactcgaaggaacaagggaagatgttaaaaaggttgctgctgcaagggcacaaattcatgagacgatgggtgaaaaagaatcaatccagaaccaggtcaaacttatgaatgttggcttggatggagttcgtaaggggcaacaggaagttaagggcaggcttaagataatagatgatcagattgatgccataaacaaacagatcggcatattggatgaggaattgaagggcgttgtggagaagagggacaagacttatgaacatattctggaattgagaaaactgcgtgaagaagggaattcttctttctaccaaaactccaacgtgttgcacaaagtgaaacaacttgctgatcaaaaggatgttggagcccttaaagagctctcagttacagaggtcgacaagttcatttctctttggtgtggtagtaagtcttttagagatgactatgagaagagactcttgcagtcgcttgatattaggcagctgagcagggacggcaggatgaggaatcctggtgaaaagccactggtgttaccagaagcacctactgtctcccgtgctgaagttccagcaagagctaatgcaaaacccgttaaggaagatcatgcacccgttgatgctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="29128" stop="31397"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29428" g_stop="29549" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29550" i_stop="29675" i_length="126">
            <donor d_prob="0.985" d_score="0.94"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29676" g_stop="29870" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="317" r_length="195" r_score="0.974"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29871" i_stop="30693" i_length="823">
            <donor d_prob="0.773" d_score="0.98"/>
            <acceptor a_prob="0.475" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30694" g_stop="30792" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="318" r_stop="416" r_length="99" r_score="0.970"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="30793" i_stop="30867" i_length="75">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30868" g_stop="31097" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="417" r_stop="646" r_length="230" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E411748" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>646</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E411748" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29428" e_stop="29549"/>
          <exon e_start="29676" e_stop="29870"/>
          <exon e_start="30694" e_stop="30792"/>
          <exon e_start="30868" e_stop="31097"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAAGTAAGGCCTTTATGTTATGTTTCTCTTATACAGATGCAAATATTTAGGTTTCATGGCTGTATCGTATCATGTGAGTTTGCTGTGATCTGCATATGATAACTGCTAACCTGCCGCTGGTATTTGTAGCTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGGGTATGCTGCTGCTTCCTGTCTTACTATTTTGGTTAAAAAAAGGGTTCATGGTATATGTTATGCTCAAATTAAATCCAATTAAAACAAAAAAAGATTCAATCCCATTGTTTTCCTTCGGTGAATCATCAACAATCAATTACATACGAGATGCTTCAATTACTGTGCTTCTACTTGTTACTGTTCTGATGATGCCATATGCTACCCATATATGGTCTATTGATCTATCTGTTTCCATGTTTGATTACATGTTTTTGTTGTGTTGTGTTGTCCTGTATCTTTGTAGTTGCCTTATGTGTAGGAATTTTATGAGTGATCAGAAAAATTTCTCCGTCGTCTACACTATTTTTTGTTAGGAGAGCAGGTAGAAACATTTCATTACTGGTCTAGATACATGCTTCACGGGCGCTGGTAAGTGACATGATGGTTGCCTGGAATTTTATAGTAATGACGACTTCTGGTTTTGCTCATGTATATTTGATTTCTAACTTGCTAGTGTCTTTCGTGTATATTTGACTGAGTACCGCAACTGTCCTTGGTAACTAACAGCTTCTAGAGACACACCCAAAAAGAAAAAATAACAGTTAAAAGGATGGCAGCTGAGAGGTAAGGAAGGTTGCTCTTCCTAAAAAGGAATAGAAAACAGTAGGAAATTTTACATCTCAAGGGAGAAGCCAGTTGATTTGTTTATGTCAACTCTCTGAAATCTTTCACGGGCGCTATTATCTTTAAAAAAATTGAAATGTTTTTTTTGATTACTGCAGTGTCAAGAGAAATAGTCTCTAAACTTATGTAGTCTTTATAACCAATTTCCTGCAATTTTCAGAATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAGGTATGATGTATTTTTCACCGGTAGTTGTTATATTTATGTGTTTGGTATTGACAACCATCTTTTTTCTTTCACTAGGTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGC</genome_strand>
        <mrna_strand>AAATTCTTCGGGAAATCAAACAACTCGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGGGCACAAATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAACCAGGTCAAA..............................................................................................................................CTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGGCAACAGGAAGTTAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGCATATTGGATGAGGAATTGAAGGGCGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACTGCGTGAAGAAGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTTCTTTCTACCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGATCAAAAGGATGTTGGAGCCCTTAAAGAGCTCTCAGTTACAGAG...........................................................................GTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAAGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGGTGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E469529" ref_strand="+" ref_description="SGN-E469529 [cSTB-12-I13]">
      <seq>aaattcttcgggaaatcaaacaactcttaggaacaagggaagatgttaaaaaggttgctgctgcaagggcacaaattcatgagacgatgggtgaaaaagaatcaatccagaaccaggtcaaacttatgaatgttggcttggatggagttcgtaaggggcaacaggaagttaacggcaggcttaagataatagatgatcagattgatgccataaacaaacagatcggcatattggatgaggaattgaacggcgttgtggagaagagggacaagacttatgaacatattctggaattgagaaaactgcgtgaagaagggaattcttctttctaccaaaactccaacgtgttgcacaaagtgaaacaacttgctgatcaaaaggatgttggagcccttaaagagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="29128" stop="31078"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29428" g_stop="29549" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="0.943"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29550" i_stop="29675" i_length="126">
            <donor d_prob="0.985" d_score="0.94"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29676" g_stop="29870" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="317" r_length="195" r_score="0.964"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29871" i_stop="30693" i_length="823">
            <donor d_prob="0.773" d_score="0.98"/>
            <acceptor a_prob="0.475" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30694" g_stop="30778" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="318" r_stop="402" r_length="85" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E469529" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>402</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E469529" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29428" e_stop="29549"/>
          <exon e_start="29676" e_stop="29870"/>
          <exon e_start="30694" e_stop="30778"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAAGTAAGGCCTTTATGTTATGTTTCTCTTATACAGATGCAAATATTTAGGTTTCATGGCTGTATCGTATCATGTGAGTTTGCTGTGATCTGCATATGATAACTGCTAACCTGCCGCTGGTATTTGTAGCTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGGGTATGCTGCTGCTTCCTGTCTTACTATTTTGGTTAAAAAAAGGGTTCATGGTATATGTTATGCTCAAATTAAATCCAATTAAAACAAAAAAAGATTCAATCCCATTGTTTTCCTTCGGTGAATCATCAACAATCAATTACATACGAGATGCTTCAATTACTGTGCTTCTACTTGTTACTGTTCTGATGATGCCATATGCTACCCATATATGGTCTATTGATCTATCTGTTTCCATGTTTGATTACATGTTTTTGTTGTGTTGTGTTGTCCTGTATCTTTGTAGTTGCCTTATGTGTAGGAATTTTATGAGTGATCAGAAAAATTTCTCCGTCGTCTACACTATTTTTTGTTAGGAGAGCAGGTAGAAACATTTCATTACTGGTCTAGATACATGCTTCACGGGCGCTGGTAAGTGACATGATGGTTGCCTGGAATTTTATAGTAATGACGACTTCTGGTTTTGCTCATGTATATTTGATTTCTAACTTGCTAGTGTCTTTCGTGTATATTTGACTGAGTACCGCAACTGTCCTTGGTAACTAACAGCTTCTAGAGACACACCCAAAAAGAAAAAATAACAGTTAAAAGGATGGCAGCTGAGAGGTAAGGAAGGTTGCTCTTCCTAAAAAGGAATAGAAAACAGTAGGAAATTTTACATCTCAAGGGAGAAGCCAGTTGATTTGTTTATGTCAACTCTCTGAAATCTTTCACGGGCGCTATTATCTTTAAAAAAATTGAAATGTTTTTTTTGATTACTGCAGTGTCAAGAGAAATAGTCTCTAAACTTATGTAGTCTTTATAACCAATTTCCTGCAATTTTCAGAATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGC</genome_strand>
        <mrna_strand>AAATTCTTCGGGAAATCAAACAACTCTTAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGGGCACAAATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAACCAGGTCAAA..............................................................................................................................CTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGGCAACAGGAAGTTAACGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGCATATTGGATGAGGAATTGAACGGCGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACTGCGTGAAGAAGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTTCTTTCTACCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGATCAAAAGGATGTTGGAGCCCTTAAAGAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E303188" ref_strand="+" ref_description="SGN-E303188 [cLEX-5-L20]">
      <seq>acacattcatgacacgatgggtgaaaaagaatcaatccagagtcaggtcaaacttatgaatgttggcttggatggagttcgtaagggacaacaggaagtcaagggcaagcttaagataatagatgatcagattgatgccataaacaaacagatcggtatattggatgaggaatcgaatgacagttgtggagaagagggacaagacttatgaacatattctggaattgagaaaacatcgtgaagaagaggaatacttctttctatcaaaactgcaacgtgtcgcacaaagcgaaacaacttgctgaccaaaaggatgttggagcccttaaagagctttcagctacagatgtcgacaaggacatttctctttggtgtggtagtatagtcttttagagatgactatgagaggagactcttgcagtcgcttgatattag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="29198" stop="31253"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29498" g_stop="29549" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="52" r_length="52" r_score="0.962"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29550" i_stop="29675" i_length="126">
            <donor d_prob="0.985" d_score="0.96"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29676" g_stop="29870" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="249" r_length="197" r_score="0.959"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29871" i_stop="30693" i_length="823">
            <donor d_prob="0.773" d_score="0.94"/>
            <acceptor a_prob="0.475" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30694" g_stop="30792" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="250" r_stop="348" r_length="99" r_score="0.939"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="30793" i_stop="30867" i_length="75">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.967" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30868" g_stop="30953" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="349" r_stop="435" r_length="87" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E303188" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>432</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E303188" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29498" e_stop="29549"/>
          <exon e_start="29676" e_stop="29870"/>
          <exon e_start="30694" e_stop="30792"/>
          <exon e_start="30868" e_stop="30953"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAAGTAAGGCCTTTATGTTATGTTTCTCTTATACAGATGCAAATATTTAGGTTTCATGGCTGTATCGTATCATGTGAGTTTGCTGTGATCTGCATATGATAACTGCTAACCTGCCGCTGGTATTTGTAGCTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGAC-GTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAG-GGGTATGCTGCTGCTTCCTGTCTTACTATTTTGGTTAAAAAAAGGGTTCATGGTATATGTTATGCTCAAATTAAATCCAATTAAAACAAAAAAAGATTCAATCCCATTGTTTTCCTTCGGTGAATCATCAACAATCAATTACATACGAGATGCTTCAATTACTGTGCTTCTACTTGTTACTGTTCTGATGATGCCATATGCTACCCATATATGGTCTATTGATCTATCTGTTTCCATGTTTGATTACATGTTTTTGTTGTGTTGTGTTGTCCTGTATCTTTGTAGTTGCCTTATGTGTAGGAATTTTATGAGTGATCAGAAAAATTTCTCCGTCGTCTACACTATTTTTTGTTAGGAGAGCAGGTAGAAACATTTCATTACTGGTCTAGATACATGCTTCACGGGCGCTGGTAAGTGACATGATGGTTGCCTGGAATTTTATAGTAATGACGACTTCTGGTTTTGCTCATGTATATTTGATTTCTAACTTGCTAGTGTCTTTCGTGTATATTTGACTGAGTACCGCAACTGTCCTTGGTAACTAACAGCTTCTAGAGACACACCCAAAAAGAAAAAATAACAGTTAAAAGGATGGCAGCTGAGAGGTAAGGAAGGTTGCTCTTCCTAAAAAGGAATAGAAAACAGTAGGAAATTTTACATCTCAAGGGAGAAGCCAGTTGATTTGTTTATGTCAACTCTCTGAAATCTTTCACGGGCGCTATTATCTTTAAAAAAATTGAAATGTTTTTTTTGATTACTGCAGTGTCAAGAGAAATAGTCTCTAAACTTATGTAGTCTTTATAACCAATTTCCTGCAATTTTCAGAATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAGGTATGATGTATTTTTCACCGGTAGTTGTTATATTTATGTGTTTGGTATTGACAACCATCTTTTTTCTTTCACTAGGTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTA-AGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAG</genome_strand>
        <mrna_strand>ACACATTCATGACACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAA..............................................................................................................................CTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAAGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATCGAATGACAGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACATCGTGAAGAAGAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACTTCTTTCTATCAAAACTGCAACGTGTCGCACAAAGCGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGCTACAGAT...........................................................................GTCGACAAGGACATTTCTCTTTGGTGTGGTAGTATAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E270875" ref_strand="+" ref_description="SGN-E270875 [cLEM-6-D7]">
      <seq>aaagaatcaatccagagtcaggtcaaacttatgaatgttggcttggatggagttcgtaagggacaacaggaagtcaagggcaggcttaagataatagatgatcagattgatgccataaacaaacagatcggtatattggatgaggaattgaaggacgttgtggagaagagggacaagacttatgaacatattctggaattgagaaaacagcgtgaagaagggaattcttctttctatcaaaactccaacgtgttgcacaaagtgaaacaacttgctgaccaaaaggatgttggagcccttaaagagctttcagttacagaggtcgacaagttcatttctctttggtgtggtagtaagtcttttagagatgactatgagaggagactcttgcagtcgcttgatattaggcagctgagcagggacggcaggatgaggaatcctgatgaaaagccactggtgttaccagaagcacctactgtctcccgtgctgaagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="29223" stop="31341"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29523" g_stop="29549" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="27" r_length="27" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29550" i_stop="29675" i_length="126">
            <donor d_prob="0.985" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29676" g_stop="29870" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="222" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29871" i_stop="30693" i_length="823">
            <donor d_prob="0.773" d_score="1.00"/>
            <acceptor a_prob="0.475" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30694" g_stop="30792" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="321" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="30793" i_stop="30867" i_length="75">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30868" g_stop="31041" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="495" r_length="174" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E270875" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>495</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E270875" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29523" e_stop="29549"/>
          <exon e_start="29676" e_stop="29870"/>
          <exon e_start="30694" e_stop="30792"/>
          <exon e_start="30868" e_stop="31041"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGAATCAATCCAGAGTCAGGTCAAAGTAAGGCCTTTATGTTATGTTTCTCTTATACAGATGCAAATATTTAGGTTTCATGGCTGTATCGTATCATGTGAGTTTGCTGTGATCTGCATATGATAACTGCTAACCTGCCGCTGGTATTTGTAGCTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGGGTATGCTGCTGCTTCCTGTCTTACTATTTTGGTTAAAAAAAGGGTTCATGGTATATGTTATGCTCAAATTAAATCCAATTAAAACAAAAAAAGATTCAATCCCATTGTTTTCCTTCGGTGAATCATCAACAATCAATTACATACGAGATGCTTCAATTACTGTGCTTCTACTTGTTACTGTTCTGATGATGCCATATGCTACCCATATATGGTCTATTGATCTATCTGTTTCCATGTTTGATTACATGTTTTTGTTGTGTTGTGTTGTCCTGTATCTTTGTAGTTGCCTTATGTGTAGGAATTTTATGAGTGATCAGAAAAATTTCTCCGTCGTCTACACTATTTTTTGTTAGGAGAGCAGGTAGAAACATTTCATTACTGGTCTAGATACATGCTTCACGGGCGCTGGTAAGTGACATGATGGTTGCCTGGAATTTTATAGTAATGACGACTTCTGGTTTTGCTCATGTATATTTGATTTCTAACTTGCTAGTGTCTTTCGTGTATATTTGACTGAGTACCGCAACTGTCCTTGGTAACTAACAGCTTCTAGAGACACACCCAAAAAGAAAAAATAACAGTTAAAAGGATGGCAGCTGAGAGGTAAGGAAGGTTGCTCTTCCTAAAAAGGAATAGAAAACAGTAGGAAATTTTACATCTCAAGGGAGAAGCCAGTTGATTTGTTTATGTCAACTCTCTGAAATCTTTCACGGGCGCTATTATCTTTAAAAAAATTGAAATGTTTTTTTTGATTACTGCAGTGTCAAGAGAAATAGTCTCTAAACTTATGTAGTCTTTATAACCAATTTCCTGCAATTTTCAGAATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAGGTATGATGTATTTTTCACCGGTAGTTGTTATATTTATGTGTTTGGTATTGACAACCATCTTTTTTCTTTCACTAGGTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTT</genome_strand>
        <mrna_strand>AAAGAATCAATCCAGAGTCAGGTCAAA..............................................................................................................................CTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAG...........................................................................GTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E604631" ref_strand="+" ref_description="SGN-E604631 [74768]">
      <seq>caggaagttaagggcaggcttaagataatagatgatcattgatgccataaacaaacagatcggcatattggatgaggaattgaagggcgttgtggagaagagggacaagacttatgaacatattctggaattgagaaaactgcgtgaagaagggaattcttctttctaccaaaactccaacgtgttgcacaaagtgaaacaacttgctgatcaaaaggatgttggagcccttaaagagctctcagttacagaggtcgacaagttcatttctctttggtgtggtagtaagtcttttagagatgactatgagaagagactcttgcagtcgcttgatattaggcagctgagcagggacggcaggatgaggaatcctggtgaaaagccactggtgttaccagaagcacctactgtctcccgtgctgaagttccagcaagagctaatgcaaaagccgttaaggaagatcatgcacccgttgatgctgctccgattcagaaagaacagcaagagaagagtggcaagcagctgaatgatgctcatggtaaaaagaaaaaagcacagagaaaaaagctgttgttgttgatgacgaggaaatctatggtttggaccttaccaaggatattaagcccaagaaaacgaagttgatgaggttacactgaaggaaatgaagaaagaggaggagatagcaaagaataagcagggctatggagaggaagcgtaagttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="29415" stop="31639"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29715" g_stop="29870" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="154" r_length="154" r_score="0.962"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29871" i_stop="30693" i_length="823">
            <donor d_prob="0.773" d_score="0.98"/>
            <acceptor a_prob="0.475" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30694" g_stop="30792" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="253" r_length="99" r_score="0.970"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30793" i_stop="30867" i_length="75">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30868" g_stop="31339" g_length="472"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="724" r_length="471" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E604631" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>727</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E604631" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29715" e_stop="29870"/>
          <exon e_start="30694" e_stop="30792"/>
          <exon e_start="30868" e_stop="31339"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGGGTATGCTGCTGCTTCCTGTCTTACTATTTTGGTTAAAAAAAGGGTTCATGGTATATGTTATGCTCAAATTAAATCCAATTAAAACAAAAAAAGATTCAATCCCATTGTTTTCCTTCGGTGAATCATCAACAATCAATTACATACGAGATGCTTCAATTACTGTGCTTCTACTTGTTACTGTTCTGATGATGCCATATGCTACCCATATATGGTCTATTGATCTATCTGTTTCCATGTTTGATTACATGTTTTTGTTGTGTTGTGTTGTCCTGTATCTTTGTAGTTGCCTTATGTGTAGGAATTTTATGAGTGATCAGAAAAATTTCTCCGTCGTCTACACTATTTTTTGTTAGGAGAGCAGGTAGAAACATTTCATTACTGGTCTAGATACATGCTTCACGGGCGCTGGTAAGTGACATGATGGTTGCCTGGAATTTTATAGTAATGACGACTTCTGGTTTTGCTCATGTATATTTGATTTCTAACTTGCTAGTGTCTTTCGTGTATATTTGACTGAGTACCGCAACTGTCCTTGGTAACTAACAGCTTCTAGAGACACACCCAAAAAGAAAAAATAACAGTTAAAAGGATGGCAGCTGAGAGGTAAGGAAGGTTGCTCTTCCTAAAAAGGAATAGAAAACAGTAGGAAATTTTACATCTCAAGGGAGAAGCCAGTTGATTTGTTTATGTCAACTCTCTGAAATCTTTCACGGGCGCTATTATCTTTAAAAAAATTGAAATGTTTTTTTTGATTACTGCAGTGTCAAGAGAAATAGTCTCTAAACTTATGTAGTCTTTATAACCAATTTCCTGCAATTTTCAGAATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAGGTATGATGTATTTTTCACCGGTAGTTGTTATATTTATGTGTTTGGTATTGACAACCATCTTTTTTCTTTCACTAGGTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACA-GGCTATGGAGAGGAAGCGTAAGTTGG</genome_strand>
        <mrna_strand>CAGGAAGTTAAGGGCAGGCTTAAGATAATAGATGATC--ATTGATGCCATAAACAAACAGATCGGCATATTGGATGAGGAATTGAAGGGCGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACTGCGTGAAGAAGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTTCTTTCTACCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGATCAAAAGGATGTTGGAGCCCTTAAAGAGCTCTCAGTTACAGAG...........................................................................GTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAAGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGGTGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAAGCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGAAGAGTGGCAAGCAGCTGAATGATGCTCATGGTAAAAA-GAAAAAAGCACAGAGAAAAAAGCTGTTGTTGTTGATGACGAGGAAATCTATGGTTTGGACCTTACCAAGGATATTAAGCCCAAGAAAA-CGAAGTTGATGAGGTTACACTGAAGGAAATGAAGAAAGAGGAGGAGATAGCAAAGAATAAGCAGGGCTATGGAGAGGAAGCGTAAGTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E585155" ref_strand="+" ref_description="SGN-E585155 [66874]">
      <seq>gttaagggcaggcttaagataatagatgatcagattgatgccataaacaaacagatcggcatattggatgaggaattgaagggcgttgtggagaagagggacaagacttatgaacatattctggaattgagaaaactgcgcgaagaagggaattcttctttctaccaaaactccaacgtgttgcacaaagtgaaacaacttgctgatcaaaaggatgttggagcccttaaagagctctcagttacagaggtcgacaagttcatttctctttggtgtggtagtaaatcttttagagatgactatgagaggagactcttgcagtcgcttgatattaggcagctgagcagggatggcaggatgaggaatcctggtgaaaagccacttgtgttaccagaagcacctactgtctcccgtgctgaagttccagcaagagctaatgcaaaacccgttaaggaagatcatgcacccgttgatgctgctccgattcagaaagaacagcaagagaagagtggcaagcagctgaatgatgctcatggtaaaaacacaaaaagcacagagaaaaaagctgtcgttgttgatgacgaggaaatctatggtttggacctacccaaggatattaagcccaagaaaaccgaagttgatgaggctacactgaaggaaatgaagaaagaggaggagatagcaaaaaataaacaggctatggagaggaagcgtaagttggccgagaaagcagctgcaaaagctgcaaagaaagctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="29421" stop="31675"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29721" g_stop="29870" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="150" r_length="150" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29871" i_stop="30693" i_length="823">
            <donor d_prob="0.773" d_score="0.96"/>
            <acceptor a_prob="0.475" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30694" g_stop="30792" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="151" r_stop="249" r_length="99" r_score="0.970"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30793" i_stop="30867" i_length="75">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.967" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30868" g_stop="31375" g_length="508"/>
          <reference_exon_boundary r_type="cDNA" r_start="250" r_stop="757" r_length="508" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E585155" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>757</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E585155" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29721" e_stop="29870"/>
          <exon e_start="30694" e_stop="30792"/>
          <exon e_start="30868" e_stop="31375"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGGGTATGCTGCTGCTTCCTGTCTTACTATTTTGGTTAAAAAAAGGGTTCATGGTATATGTTATGCTCAAATTAAATCCAATTAAAACAAAAAAAGATTCAATCCCATTGTTTTCCTTCGGTGAATCATCAACAATCAATTACATACGAGATGCTTCAATTACTGTGCTTCTACTTGTTACTGTTCTGATGATGCCATATGCTACCCATATATGGTCTATTGATCTATCTGTTTCCATGTTTGATTACATGTTTTTGTTGTGTTGTGTTGTCCTGTATCTTTGTAGTTGCCTTATGTGTAGGAATTTTATGAGTGATCAGAAAAATTTCTCCGTCGTCTACACTATTTTTTGTTAGGAGAGCAGGTAGAAACATTTCATTACTGGTCTAGATACATGCTTCACGGGCGCTGGTAAGTGACATGATGGTTGCCTGGAATTTTATAGTAATGACGACTTCTGGTTTTGCTCATGTATATTTGATTTCTAACTTGCTAGTGTCTTTCGTGTATATTTGACTGAGTACCGCAACTGTCCTTGGTAACTAACAGCTTCTAGAGACACACCCAAAAAGAAAAAATAACAGTTAAAAGGATGGCAGCTGAGAGGTAAGGAAGGTTGCTCTTCCTAAAAAGGAATAGAAAACAGTAGGAAATTTTACATCTCAAGGGAGAAGCCAGTTGATTTGTTTATGTCAACTCTCTGAAATCTTTCACGGGCGCTATTATCTTTAAAAAAATTGAAATGTTTTTTTTGATTACTGCAGTGTCAAGAGAAATAGTCTCTAAACTTATGTAGTCTTTATAACCAATTTCCTGCAATTTTCAGAATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAGGTATGATGTATTTTTCACCGGTAGTTGTTATATTTATGTGTTTGGTATTGACAACCATCTTTTTTCTTTCACTAGGTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTC</genome_strand>
        <mrna_strand>GTTAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGCATATTGGATGAGGAATTGAAGGGCGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACTGCGCGAAGAAGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTTCTTTCTACCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGATCAAAAGGATGTTGGAGCCCTTAAAGAGCTCTCAGTTACAGAG...........................................................................GTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAATCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGATGGCAGGATGAGGAATCCTGGTGAAAAGCCACTTGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGAAGAGTGGCAAGCAGCTGAATGATGCTCATGGTAAAAACACAAAAAGCACAGAGAAAAAAGCTGTCGTTGTTGATGACGAGGAAATCTATGGTTTGGACCTACCCAAGGATATTAAGCCCAAGAAAACCGAAGTTGATGAGGCTACACTGAAGGAAATGAAGAAAGAGGAGGAGATAGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E476133" ref_strand="+" ref_description="SGN-E476133 [cSTB-43-M22]">
      <seq>gattgatgccataaacaaacagatcggcatattggatgaggaattgaagggcgttgtggagaagagggacaagacttatgaacatattctggaattgagaaaactgcgtgaagaagggaattcttctttctaccaaaactccaacgtgttgcacaaagtgaaacaacttgctgatcaaaaggatgttggagcccttaaagagctctcagttacagaggtcgacaagttcatttctctttggtgtggtagtaagtcttttagagatgactatgagaagagactcttgcagtcgcttgatattaggcagctgagcagggacggcaggatgaggaatcctggtgaaaagccactggtgttaccagaagcacctactgtctcccgtgctgaagttccagcaagagctaatgcaaaacccgttaaggaagatcatgcacccgttgatgctgctccgattcagaaagaacagcaagagaagagtggcaagcagctgaatgatgctcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="29453" stop="31453"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29753" g_stop="29870" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="118" r_length="118" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29871" i_stop="30693" i_length="823">
            <donor d_prob="0.773" d_score="0.98"/>
            <acceptor a_prob="0.475" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30694" g_stop="30792" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="119" r_stop="217" r_length="99" r_score="0.970"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30793" i_stop="30867" i_length="75">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30868" g_stop="31153" g_length="286"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="503" r_length="286" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E476133" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>503</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E476133" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29753" e_stop="29870"/>
          <exon e_start="30694" e_stop="30792"/>
          <exon e_start="30868" e_stop="31153"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGGGTATGCTGCTGCTTCCTGTCTTACTATTTTGGTTAAAAAAAGGGTTCATGGTATATGTTATGCTCAAATTAAATCCAATTAAAACAAAAAAAGATTCAATCCCATTGTTTTCCTTCGGTGAATCATCAACAATCAATTACATACGAGATGCTTCAATTACTGTGCTTCTACTTGTTACTGTTCTGATGATGCCATATGCTACCCATATATGGTCTATTGATCTATCTGTTTCCATGTTTGATTACATGTTTTTGTTGTGTTGTGTTGTCCTGTATCTTTGTAGTTGCCTTATGTGTAGGAATTTTATGAGTGATCAGAAAAATTTCTCCGTCGTCTACACTATTTTTTGTTAGGAGAGCAGGTAGAAACATTTCATTACTGGTCTAGATACATGCTTCACGGGCGCTGGTAAGTGACATGATGGTTGCCTGGAATTTTATAGTAATGACGACTTCTGGTTTTGCTCATGTATATTTGATTTCTAACTTGCTAGTGTCTTTCGTGTATATTTGACTGAGTACCGCAACTGTCCTTGGTAACTAACAGCTTCTAGAGACACACCCAAAAAGAAAAAATAACAGTTAAAAGGATGGCAGCTGAGAGGTAAGGAAGGTTGCTCTTCCTAAAAAGGAATAGAAAACAGTAGGAAATTTTACATCTCAAGGGAGAAGCCAGTTGATTTGTTTATGTCAACTCTCTGAAATCTTTCACGGGCGCTATTATCTTTAAAAAAATTGAAATGTTTTTTTTGATTACTGCAGTGTCAAGAGAAATAGTCTCTAAACTTATGTAGTCTTTATAACCAATTTCCTGCAATTTTCAGAATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAGGTATGATGTATTTTTCACCGGTAGTTGTTATATTTATGTGTTTGGTATTGACAACCATCTTTTTTCTTTCACTAGGTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTG</genome_strand>
        <mrna_strand>GATTGATGCCATAAACAAACAGATCGGCATATTGGATGAGGAATTGAAGGGCGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACTGCGTGAAGAAGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTTCTTTCTACCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGATCAAAAGGATGTTGGAGCCCTTAAAGAGCTCTCAGTTACAGAG...........................................................................GTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAAGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGGTGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGAAGAGTGGCAAGCAGCTGAATGATGCTCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E468692" ref_strand="+" ref_description="SGN-E468692 [cSTB-5-B20]">
      <seq>attcggcacgagggttgttgttgatgccataaacaaacagatcggcatattggatgaggaattgaagggcgttgtggagaagagggacaagacttatgaacatattctggaattgagaaaactgcgtgaagaagggaattcttctttctaccaaaactccaacgtgttgcacaaagtgaaacaacttgctgatcaaaaggatgttggagcccttaaagagctctcagttacagaggtcgacaagttcatttctctttggtgtggtagtaagtcttttagagatgactatgagaagagactcttgcagtcgcttgatattaggcagctgagcagggacggcaggatgaggaatcctggtgaaaagccactggtgttaccagaagcacctactgtctcccgtgctgaagttccagcaagagctaatgcaaaacccgttaaggaagatcatgcacccgttgatgctgctccgattcagaaagaacagcaagagaagagtggcaagcagctgaatgatgctcatggtaaaaacacaaaaagcacagagaaaaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="29455" stop="31483"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29754" g_stop="29870" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="20" r_stop="136" r_length="117" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29871" i_stop="30693" i_length="823">
            <donor d_prob="0.773" d_score="0.98"/>
            <acceptor a_prob="0.475" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30694" g_stop="30792" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="137" r_stop="235" r_length="99" r_score="0.970"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30793" i_stop="30867" i_length="75">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30868" g_stop="31183" g_length="316"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="551" r_length="316" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E468692" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>532</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E468692" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29754" e_stop="29870"/>
          <exon e_start="30694" e_stop="30792"/>
          <exon e_start="30868" e_stop="31183"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGGGTATGCTGCTGCTTCCTGTCTTACTATTTTGGTTAAAAAAAGGGTTCATGGTATATGTTATGCTCAAATTAAATCCAATTAAAACAAAAAAAGATTCAATCCCATTGTTTTCCTTCGGTGAATCATCAACAATCAATTACATACGAGATGCTTCAATTACTGTGCTTCTACTTGTTACTGTTCTGATGATGCCATATGCTACCCATATATGGTCTATTGATCTATCTGTTTCCATGTTTGATTACATGTTTTTGTTGTGTTGTGTTGTCCTGTATCTTTGTAGTTGCCTTATGTGTAGGAATTTTATGAGTGATCAGAAAAATTTCTCCGTCGTCTACACTATTTTTTGTTAGGAGAGCAGGTAGAAACATTTCATTACTGGTCTAGATACATGCTTCACGGGCGCTGGTAAGTGACATGATGGTTGCCTGGAATTTTATAGTAATGACGACTTCTGGTTTTGCTCATGTATATTTGATTTCTAACTTGCTAGTGTCTTTCGTGTATATTTGACTGAGTACCGCAACTGTCCTTGGTAACTAACAGCTTCTAGAGACACACCCAAAAAGAAAAAATAACAGTTAAAAGGATGGCAGCTGAGAGGTAAGGAAGGTTGCTCTTCCTAAAAAGGAATAGAAAACAGTAGGAAATTTTACATCTCAAGGGAGAAGCCAGTTGATTTGTTTATGTCAACTCTCTGAAATCTTTCACGGGCGCTATTATCTTTAAAAAAATTGAAATGTTTTTTTTGATTACTGCAGTGTCAAGAGAAATAGTCTCTAAACTTATGTAGTCTTTATAACCAATTTCCTGCAATTTTCAGAATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAGGTATGATGTATTTTTCACCGGTAGTTGTTATATTTATGTGTTTGGTATTGACAACCATCTTTTTTCTTTCACTAGGTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAG</genome_strand>
        <mrna_strand>GTTGATGCCATAAACAAACAGATCGGCATATTGGATGAGGAATTGAAGGGCGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACTGCGTGAAGAAGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTTCTTTCTACCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGATCAAAAGGATGTTGGAGCCCTTAAAGAGCTCTCAGTTACAGAG...........................................................................GTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAAGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGGTGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGAAGAGTGGCAAGCAGCTGAATGATGCTCATGGTAAAAACACAAAAAGCACAGAGAAAAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E292204" ref_strand="+" ref_description="SGN-E292204 [cLET-1-J17]">
      <seq>gacgttgtggagaagagggacaagacttatgaacatattctggaattgagaaaacagcgtgaagaagggaattcttctttctatcaaaactccaacgtgttgcacaaagtgaaacaacttgctgaccaaaaggatgttggagcccttaaagagctttcagttacagaggtcgacaagttcatttctctttggtgtggtagtaagtcttttagagatgactatgagaggagactcttgcagtcgcttgatattaggcagctgagcagggacggcaggatgaggaatcctgatgaaaagccactggtgttaccagaagcacctactgtctcccgtgctgaagttccagcaagagctaatgcaaaacccgttaaggaagatcatgcacccgttgatgctgctccgattcagaaagaacagcaagaggttagcggcaagcagctgaatgatgctcgtggtaaaaactcaaaaagcacagagaaaaaagctgttgttgatgatgatgaggaaatctatggtttggacctacacaaggattctaagcccaagaaaatcgaaattgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="29502" stop="31561"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29802" g_stop="29870" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="69" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29871" i_stop="30693" i_length="823">
            <donor d_prob="0.773" d_score="1.00"/>
            <acceptor a_prob="0.475" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30694" g_stop="30792" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="168" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30793" i_stop="30867" i_length="75">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30868" g_stop="31261" g_length="394"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="562" r_length="394" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E292204" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>562</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E292204" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29802" e_stop="29870"/>
          <exon e_start="30694" e_stop="30792"/>
          <exon e_start="30868" e_stop="31261"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGGGTATGCTGCTGCTTCCTGTCTTACTATTTTGGTTAAAAAAAGGGTTCATGGTATATGTTATGCTCAAATTAAATCCAATTAAAACAAAAAAAGATTCAATCCCATTGTTTTCCTTCGGTGAATCATCAACAATCAATTACATACGAGATGCTTCAATTACTGTGCTTCTACTTGTTACTGTTCTGATGATGCCATATGCTACCCATATATGGTCTATTGATCTATCTGTTTCCATGTTTGATTACATGTTTTTGTTGTGTTGTGTTGTCCTGTATCTTTGTAGTTGCCTTATGTGTAGGAATTTTATGAGTGATCAGAAAAATTTCTCCGTCGTCTACACTATTTTTTGTTAGGAGAGCAGGTAGAAACATTTCATTACTGGTCTAGATACATGCTTCACGGGCGCTGGTAAGTGACATGATGGTTGCCTGGAATTTTATAGTAATGACGACTTCTGGTTTTGCTCATGTATATTTGATTTCTAACTTGCTAGTGTCTTTCGTGTATATTTGACTGAGTACCGCAACTGTCCTTGGTAACTAACAGCTTCTAGAGACACACCCAAAAAGAAAAAATAACAGTTAAAAGGATGGCAGCTGAGAGGTAAGGAAGGTTGCTCTTCCTAAAAAGGAATAGAAAACAGTAGGAAATTTTACATCTCAAGGGAGAAGCCAGTTGATTTGTTTATGTCAACTCTCTGAAATCTTTCACGGGCGCTATTATCTTTAAAAAAATTGAAATGTTTTTTTTGATTACTGCAGTGTCAAGAGAAATAGTCTCTAAACTTATGTAGTCTTTATAACCAATTTCCTGCAATTTTCAGAATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAGGTATGATGTATTTTTCACCGGTAGTTGTTATATTTATGTGTTTGGTATTGACAACCATCTTTTTTCTTTCACTAGGTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATG</genome_strand>
        <mrna_strand>GACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAG...........................................................................GTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E591138" ref_strand="+" ref_description="SGN-E591138 [44843]">
      <seq>ggacaagacttatgaacatattctggaattgagaaaactgcgtgaagaagggaattcttctttctaccaaaactccaacgtgttgcacaaagtgaaacaacttgctgatcaaaaggatgttggagcccttaaagagctctcagttacagaggtcgacaagttcatttctctttggtgtggtagtaagtcttttagagatgactatgagaagagactcttgcagtcgcttgatattaggcagctgagcagggacggcaggatgaggaatcctggtgaaaagccactggtgttaccagaagcacctactgtctcccgtgctgaagttccagcaagagctaatgcaaaacccgttaaggaagatcatgcacccgttgatgctgctccgattcagaaagaacagcaagagaagagtggcaagcagctgaatgatgctcatggtaaaaacacaaaaagcacagagaaaaaagctgttgttgttgatgacgaggaaatctatggtttggacctacccaaggatattaagcccaagaaaaccgaagttgatgaggctacactgaaggaaatgaagaaagaggaggagatagcaaaaaataaacaggctatggagaggaagcgtaagttggccgagaaagcagctgcaaaagctgcaaagaaagctcagctagaagctgaaaagaagctcaaggaacgtgaggaagaaagcaaagaagaagggtggatcttctgctgctggtcaggaaccaaccgaggaaccaactgaaacacccgaggaaattgctgaggaagaaatgcgagagactgttgaaacagccgttgcaccaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="29519" stop="32014"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29819" g_stop="29870" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="52" r_length="52" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29871" i_stop="30693" i_length="823">
            <donor d_prob="0.773" d_score="0.98"/>
            <acceptor a_prob="0.475" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30694" g_stop="30792" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="151" r_length="99" r_score="0.970"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30793" i_stop="30867" i_length="75">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30868" g_stop="31401" g_length="534"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="685" r_length="534" r_score="0.966"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31402" i_stop="31574" i_length="173">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31575" g_stop="31713" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="686" r_stop="822" r_length="137" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E591138" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>824</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E591138" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29819" e_stop="29870"/>
          <exon e_start="30694" e_stop="30792"/>
          <exon e_start="30868" e_stop="31401"/>
          <exon e_start="31575" e_stop="31713"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGGGTATGCTGCTGCTTCCTGTCTTACTATTTTGGTTAAAAAAAGGGTTCATGGTATATGTTATGCTCAAATTAAATCCAATTAAAACAAAAAAAGATTCAATCCCATTGTTTTCCTTCGGTGAATCATCAACAATCAATTACATACGAGATGCTTCAATTACTGTGCTTCTACTTGTTACTGTTCTGATGATGCCATATGCTACCCATATATGGTCTATTGATCTATCTGTTTCCATGTTTGATTACATGTTTTTGTTGTGTTGTGTTGTCCTGTATCTTTGTAGTTGCCTTATGTGTAGGAATTTTATGAGTGATCAGAAAAATTTCTCCGTCGTCTACACTATTTTTTGTTAGGAGAGCAGGTAGAAACATTTCATTACTGGTCTAGATACATGCTTCACGGGCGCTGGTAAGTGACATGATGGTTGCCTGGAATTTTATAGTAATGACGACTTCTGGTTTTGCTCATGTATATTTGATTTCTAACTTGCTAGTGTCTTTCGTGTATATTTGACTGAGTACCGCAACTGTCCTTGGTAACTAACAGCTTCTAGAGACACACCCAAAAAGAAAAAATAACAGTTAAAAGGATGGCAGCTGAGAGGTAAGGAAGGTTGCTCTTCCTAAAAAGGAATAGAAAACAGTAGGAAATTTTACATCTCAAGGGAGAAGCCAGTTGATTTGTTTATGTCAACTCTCTGAAATCTTTCACGGGCGCTATTATCTTTAAAAAAATTGAAATGTTTTTTTTGATTACTGCAGTGTCAAGAGAAATAGTCTCTAAACTTATGTAGTCTTTATAACCAATTTCCTGCAATTTTCAGAATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAGGTATGATGTATTTTTCACCGGTAGTTGTTATATTTATGTGTTTGGTATTGACAACCATCTTTTTTCTTTCACTAGGTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAGGTAATTCTCTCTCTGATTCTTTATAGTCATACCATCTGTGTTGCTCGGACTCTTCAAAAATGTCAAACGAATCCAAAAGTGAAGAGTCCCTGCAACTTAGCTTTCCATTTCCTTGTAGTTTTAGGTTGTAAACGTTTCAGATTTACTTATCTCGTTACTTTGATCCCTTTCAGGAACGTGA-GAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCA</genome_strand>
        <mrna_strand>GGACAAGACTTATGAACATATTCTGGAATTGAGAAAACTGCGTGAAGAAGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTTCTTTCTACCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGATCAAAAGGATGTTGGAGCCCTTAAAGAGCTCTCAGTTACAGAG...........................................................................GTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAAGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGGTGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGAAGAGTGGCAAGCAGCTGAATGATGCTCATGGTAAAAACACAAAAAGCACAGAGAAAAAAGCTGTTGTTGTTGATGACGAGGAAATCTATGGTTTGGACCTACCCAAGGATATTAAGCCCAAGAAAACCGAAGTTGATGAGGCTACACTGAAGGAAATGAAGAAAGAGGAGGAGATAGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAG.............................................................................................................................................................................GAACGTGAGGAAGAAAGCAAAGAAGAAGGGTGGATCTTCTGCTGCTGGTCAGGAACCAACCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAG-AAATGC-GA-GAGACTGTTGAAACAGCCGTTGCACCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E623031" ref_strand="+" ref_description="SGN-E623031 [73405]">
      <seq>tagngaattgagaaaactgcgtgaagaagggaattcttctttctaccaaaactccaacgtgttgcacaaagtgaaacaacttgctgatcaaaaggatgttggagcccttaaagagctctcagttacagaggtcgacaagttcatttctctttggtgtggtagtaagtcttttagagatgactatgagaagagactcttgcagtcgcttgatattaggcagctgagcagggacggcaggatgaggaatcctggtgaaaagccactggtgttaccagaagcacctactgtctcccgtgctgaagttccagcaagagctaatgcaaaacccgttaaggaagatcatgcacccgttgatgctgctccgattcagaaagaacagcaagagaagagtggcaagcagctgaatgatgctcatggtaaaaacacaaaaagcacagagaaaaaagctgttgttgttgatgacgaggaaatctatggtttggacctacccaaggatattaagcccaagaaaaccgaagttgatgaggctacactgaaggaaatgaagaaagaggaggagatagcaaaaaataaacaggctatggagacggaagcgtaagtttggccgagaaagcagctgcaaaagctgcaaagaaaagctcagctagaagctggaaaagaagctcaaggaacgtgagaagaaagca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="30393" stop="31892"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30694" g_stop="30792" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="130" r_length="99" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30793" i_stop="30867" i_length="75">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30868" g_stop="31401" g_length="534"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="668" r_length="538" r_score="0.951"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31402" i_stop="31574" i_length="173">
            <donor d_prob="0.998" d_score="0.92"/>
            <acceptor a_prob="0.981" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31575" g_stop="31592" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="669" r_stop="686" r_length="18" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E623031" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>651</cumulative_length_of_scored_exons>
        <coverage percentage="0.949" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E623031" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30694" e_stop="30792"/>
          <exon e_start="30868" e_stop="31401"/>
          <exon e_start="31575" e_stop="31592"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAGGTATGATGTATTTTTCACCGGTAGTTGTTATATTTATGTGTTTGGTATTGACAACCATCTTTTTTCTTTCACTAGGTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGA-GGAAGCGTAAG-TTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAG-AAAGCTCAGCTAGAAGCT-GAAAAGAAGCTCAAGGTAATTCTCTCTCTGATTCTTTATAGTCATACCATCTGTGTTGCTCGGACTCTTCAAAAATGTCAAACGAATCCAAAAGTGAAGAGTCCCTGCAACTTAGCTTTCCATTTCCTTGTAGTTTTAGGTTGTAAACGTTTCAGATTTACTTATCTCGTTACTTTGATCCCTTTCAGGAACGTGAGAAGAAAGCA</genome_strand>
        <mrna_strand>AATTCTTCTTTCTACCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGATCAAAAGGATGTTGGAGCCCTTAAAGAGCTCTCAGTTACAGAG...........................................................................GTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAAGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGGTGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGAAGAGTGGCAAGCAGCTGAATGATGCTCATGGTAAAAACACAAAAAGCACAGAGAAAAAAGCTGTTGTTGTTGATGACGAGGAAATCTATGGTTTGGACCTACCCAAGGATATTAAGCCCAAGAAAACCGAAGTTGATGAGGCTACACTGAAGGAAATGAAGAAAGAGGAGGAGATAGCAAAAAATAAACAGGCTATGGAGACGGAAGCGTAAGTTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAAGCTCAGCTAGAAGCTGGAAAAGAAGCTCAAG.............................................................................................................................................................................GAACGTGAGAAGAAAGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E453037" ref_strand="+" ref_description="SGN-E453037 [cSTS-18-N15]">
      <seq>gaagaagggaattcttctttctaccaaaactccaacgtgttgcacaaagtgaaacaacttgctgatcaaaaggatgttggagcccttaaagagctctcagttacagaggtcgacaagttcatttctctttggtgtggtagcaagtcttttagagatgactatgagatgagactcttgcagtcgcttgatattaggcagctgagcagggacggcaggatgaggaatcctggtgaaaagccactggtgttaccagaagcacctaccgtctcccgtgctgaagttccagcaagagctaatgcaaaacccgttaaggaagatcatgcacccgttgatgctgctccgattcagaaagaacagcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="30393" stop="31419"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30694" g_stop="30792" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="108" r_length="99" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30793" i_stop="30867" i_length="75">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.967" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30868" g_stop="31119" g_length="252"/>
          <reference_exon_boundary r_type="cDNA" r_start="109" r_stop="360" r_length="252" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E453037" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>351</cumulative_length_of_scored_exons>
        <coverage percentage="0.975" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E453037" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30694" e_stop="30792"/>
          <exon e_start="30868" e_stop="31119"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAGGTATGATGTATTTTTCACCGGTAGTTGTTATATTTATGTGTTTGGTATTGACAACCATCTTTTTTCTTTCACTAGGTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAA</genome_strand>
        <mrna_strand>AATTCTTCTTTCTACCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGATCAAAAGGATGTTGGAGCCCTTAAAGAGCTCTCAGTTACAGAG...........................................................................GTCGACAAGTTCATTTCTCTTTGGTGTGGTAGCAAGTCTTTTAGAGATGACTATGAGATGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGGTGAAAAGCCACTGGTGTTACCAGAAGCACCTACCGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E378633" ref_strand="+" ref_description="SGN-E378633 [TUS-45-A1]">
      <seq>tttctatcaaaactccaacgtgttgcacaaagtgaaacaacttgctgaccaaaaggatgttggagcccttaaagagctttcagttacagaggtcgacaagttcatttctctttggtgtggtagtaagtcttttagagatgactatgagaggagactcttgcagtcgcttgatattaggcagctgagcagggacggcaggatgaggaatcctgatgaaaagccactggtgttaccagaagcacctactgtctcccgtgctgaagttccagcaagagctaatgcaaaacccgttaaggaagatcatgcacccgttgatgctgctccgattcagaaagaacagcaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="30402" stop="31420"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30702" g_stop="30792" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="91" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30793" i_stop="30867" i_length="75">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30868" g_stop="31120" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="344" r_length="253" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E378633" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>344</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E378633" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30702" e_stop="30792"/>
          <exon e_start="30868" e_stop="31120"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAGGTATGATGTATTTTTCACCGGTAGTTGTTATATTTATGTGTTTGGTATTGACAACCATCTTTTTTCTTTCACTAGGTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAG</genome_strand>
        <mrna_strand>TTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAG...........................................................................GTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E228965" ref_strand="+" ref_description="SGN-E228965 [cLEL-29-H19](-)">
      <seq>ggcacgagcacaaagtgaaacaactttgctgaccaaaaggatgttggagcccttaaagagctttcagttacagaggtcaacaagttcatttctctttggtgtggtagtaagtcttttagagatgactatgagaggagactcttgcagtcgcttgatattaggcagctgagcagggacggcaggatgaggaatcctaatgaaaagccactggtgttaccagaagcacctactgtctcccgtgctgaagttgcagcaagagctaatgcaaaacccgttaagcaagatcatgcacccgttgaaaatgctacaattcagaaagaacagcaaggagtacttctagagcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="30426" stop="31438"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30718" g_stop="30792" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="75" r_length="75" r_score="0.893"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30793" i_stop="30867" i_length="75">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30868" g_stop="31120" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="76" r_stop="328" r_length="253" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E228965" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>328</cumulative_length_of_scored_exons>
        <coverage percentage="0.953" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E228965" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30718" e_stop="30792"/>
          <exon e_start="30868" e_stop="31120"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACGTGTTGCACAAAGTGAAACAAC-TTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAGGTATGATGTATTTTTCACCGGTAGTTGTTATATTTATGTGTTTGGTATTGACAACCATCTTTTTTCTTTCACTAGGTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAG</genome_strand>
        <mrna_strand>GGCACG-AGCACAAAGTGAAACAACTTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAG...........................................................................GTCAACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTAATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTGCAGCAAGAGCTAATGCAAAACCCGTTAAGCAAGATCATGCACCCGTTGAAAATGCTACAATTCAGAAAGAACAGCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E228676" ref_strand="+" ref_description="SGN-E228676 [cLEL-29-H7](-)">
      <seq>ggcacgagcacaaagtgaaacaacttgctgaccaaaaggatgttggagcccttaaagagctttcagttacagaggtcgacaagttcatttctctttggtgtggtagtaagtcttttagagatgactatgagaggagactcttgcagtcgcttgatattaggcagctgagcagggacggcaggatgaggaatcctgatgaaaagccactggtgttaccagaagcacctactgtctcccgtgctgaagttccagcaagagctaatgcaaaacccgttaaggaagatcatgcacccgttgatgctgctccgattcagaaagaacagcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="30426" stop="31419"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30718" g_stop="30792" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="74" r_length="74" r_score="0.920"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30793" i_stop="30867" i_length="75">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30868" g_stop="31119" g_length="252"/>
          <reference_exon_boundary r_type="cDNA" r_start="75" r_stop="326" r_length="252" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E228676" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>327</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E228676" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30718" e_stop="30792"/>
          <exon e_start="30868" e_stop="31119"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAGGTATGATGTATTTTTCACCGGTAGTTGTTATATTTATGTGTTTGGTATTGACAACCATCTTTTTTCTTTCACTAGGTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAA</genome_strand>
        <mrna_strand>GGCACG-AGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAG...........................................................................GTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E229156" ref_strand="+" ref_description="SGN-E229156 [cLEL-29-H7](-)">
      <seq>ggcacgagcacaaagtgaaacaacttgctgaccaaaaggatgttggagcccttaaagagctttcagttacagaggtcgacaagttcatttctctttggtgtggtagtaagtcttttagagatgactatgagaggagactcttgcagtcgcttgatattaggcagctgagcagggacggcaggatgaggaatcctgatgaaaagccactggtgttaccagaagcacctactgtctcccgtgctgaagttccagcaagagctaatgcaaaacccgttaaggaagatcatgcacccgttgatgctgctccgattcagaaagaacagcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="30426" stop="31419"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30718" g_stop="30792" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="74" r_length="74" r_score="0.920"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30793" i_stop="30867" i_length="75">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30868" g_stop="31119" g_length="252"/>
          <reference_exon_boundary r_type="cDNA" r_start="75" r_stop="326" r_length="252" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E229156" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>327</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E229156" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30718" e_stop="30792"/>
          <exon e_start="30868" e_stop="31119"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAGGTATGATGTATTTTTCACCGGTAGTTGTTATATTTATGTGTTTGGTATTGACAACCATCTTTTTTCTTTCACTAGGTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAA</genome_strand>
        <mrna_strand>GGCACG-AGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAG...........................................................................GTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E271229" ref_strand="+" ref_description="SGN-E271229 [cLEM-5-I2]">
      <seq>ttgcacaaagtgaaacaacttgctgaccaaaaggatgttggagcccttaaagagctttcagttacagaggtcgacaagttcatttctctttggtgtggtagtaagtcttttagagatgactatgagaggagactcttgcagtcgcttgatattatgcagctgagcagggacggcaggatgaggaatcctgatgaaaagccactggtgttaccagaagcacctactgtctcccgtgctgaagttccagcaagagctaatgcaaaacccgttaaggaagatcatgcacccgttgatgctgctccgattcagaaagaacagcaagaggttagcggcaagcagctgaatgatgctcgtggtaaaaactcaaaaagcacagagaaaaaagctgttgttgatgatgatgaggaaatctatggtttggacctacacaaggattctaagcccaagaaaatcgaaattgatgaggcaacact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="30424" stop="31571"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30724" g_stop="30792" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="69" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30793" i_stop="30867" i_length="75">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30868" g_stop="31271" g_length="404"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="473" r_length="404" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E271229" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>473</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E271229" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30724" e_stop="30792"/>
          <exon e_start="30868" e_stop="31271"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAGGTATGATGTATTTTTCACCGGTAGTTGTTATATTTATGTGTTTGGTATTGACAACCATCTTTTTTCTTTCACTAGGTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACT</genome_strand>
        <mrna_strand>TTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAG...........................................................................GTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTATGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E703067" ref_strand="+" ref_description="SGN-E703067 [FA20BH04]">
      <seq>aggatgttggagcccttaaagagctttcagttacagaggtcgacaagttcatttctctttggtgtggtagtaagtcttttagagatgactatgagaggagactcttgcagtcgcttgatattaggcagctgagcagggacggcaggatgaggaatcctgatgaaaagccactggtgttaccagaagcacctactgtctcccgtgctgaagttccagcaagagctaatgcaaaacccgttaaggaagatcatgcacccgttgatgctgctccgattcagaaagaacagcaagaggttagcggcaagcagctgaatgatgctcgtggtaaaaactcaaaaagcacagagaaaaaagctgttgttgatgatgatgaggaaatctatggtttggacctacacaaggattctaagcccaagaaaatcgaaattgatgaggcaacactgaaggagatgaagaaagaggaggagatggcaaaaaataaacaggctatggagaggaagcgtaagttggccgagaaagcagctgcaaaagctgcaaagaaagctcagctagaagctgaaaagaagctcaaggaacgtgagaagaaagcaaagaagaagagcggagcttctgctgctggtcaggaaccaatcgaggaaccaactgaaacacccgaggaaattgctgaggaagaaaatgcagaggagactgttgaaacagccgttgcacccaaggtcaaggcacggaaagagaacaccatcaggcacagagcaacacgtgcaagaggctccgagcttcccaaagctatactnaagcgcaagaaagcaacaaactactggctatgggcagctgctcctgctgcactcgcgattctggtacttctagtcatcggatacatgtatcttcaaaagtagaaagaggcaggtgggggagagacaaacaaaaacaaaaactttgtttttagggttttaattttttgtttacaaatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="30455" stop="32273"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30755" g_stop="30792" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="38" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30793" i_stop="30867" i_length="75">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30868" g_stop="31401" g_length="534"/>
          <reference_exon_boundary r_type="cDNA" r_start="39" r_stop="572" r_length="534" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31402" i_stop="31574" i_length="173">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31575" g_stop="31973" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="573" r_stop="970" r_length="398" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E703067" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>971</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E703067" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30755" e_stop="30792"/>
          <exon e_start="30868" e_stop="31401"/>
          <exon e_start="31575" e_stop="31973"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAGGTATGATGTATTTTTCACCGGTAGTTGTTATATTTATGTGTTTGGTATTGACAACCATCTTTTTTCTTTCACTAGGTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAGGTAATTCTCTCTCTGATTCTTTATAGTCATACCATCTGTGTTGCTCGGACTCTTCAAAAATGTCAAACGAATCCAAAAGTGAAGAGTCCCTGCAACTTAGCTTTCCATTTCCTTGTAGTTTTAGGTTGTAAACGTTTCAGATTTACTTATCTCGTTACTTTGATCCCTTTCAGGAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGCAGGTGGGGAGAGACAAAACAAAAAACAAAAACTTTGTTTTTAGTGTTTTAATTTTTTGTTTACAAATACT</genome_strand>
        <mrna_strand>AGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAG...........................................................................GTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAG.............................................................................................................................................................................GAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTNAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGCAGGTGGGG-GAGAGACAAACAAAAACAAAAACTTTGTTTTTAGGGTTTTAATTTTTTGTTTACAAATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E456088" ref_strand="+" ref_description="SGN-E456088 [cSTS-28-B23]">
      <seq>cagttacagaggtcgacaagttcatttctctttggtgtggtagcaagtcttttagagatgactatgagatgagactcttgcagtcgcttgatattaggcagctgagcagggacggcaggatgaggaatcctggtgaaaagccactggtgttaccagaagcacctaccgtctcccgtgctgaagttccagcaagagctaatgcaaaacccgttaaggaagatcatgcacccgttgatgctgctccgattcagaaagaacagcaagagaagagtggcaagcagctgaatgatgctcatggtaaaaacacaaaaagcatagagaaaaaagctgttgttgttgatgacgaggaaatctatggtttggacctacccaaggatattaagcccaagaaaaccgaagttgatgaggctacactgaaggaaatgaagaaagaggaggagatagcaaaaaataaacaggctatggagaggaagcgtaagttggccgagaaagcagctgcaaaagctgcaaagaaagctcagctagaagctgaaaagaagctcaaggaacgtgagaagaaagcaaagaagaagggcggagcttctgctgctggtcaggaaccaattgaggaaccaactgaaacccccgaggaaattgctgaggaagaaaatgcagaggagactgctgaaaccgccgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="30566" stop="32007"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30782" g_stop="30792" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="11" r_length="11" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30793" i_stop="30867" i_length="75">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.967" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30868" g_stop="31401" g_length="534"/>
          <reference_exon_boundary r_type="cDNA" r_start="12" r_stop="545" r_length="534" r_score="0.961"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31402" i_stop="31574" i_length="173">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31575" g_stop="31707" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="546" r_stop="678" r_length="133" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E456088" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>678</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E456088" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30782" e_stop="30792"/>
          <exon e_start="30868" e_stop="31401"/>
          <exon e_start="31575" e_stop="31707"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGTTACAGAGGTATGATGTATTTTTCACCGGTAGTTGTTATATTTATGTGTTTGGTATTGACAACCATCTTTTTTCTTTCACTAGGTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAGGTAATTCTCTCTCTGATTCTTTATAGTCATACCATCTGTGTTGCTCGGACTCTTCAAAAATGTCAAACGAATCCAAAAGTGAAGAGTCCCTGCAACTTAGCTTTCCATTTCCTTGTAGTTTTAGGTTGTAAACGTTTCAGATTTACTTATCTCGTTACTTTGATCCCTTTCAGGAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTG</genome_strand>
        <mrna_strand>CAGTTACAGAG...........................................................................GTCGACAAGTTCATTTCTCTTTGGTGTGGTAGCAAGTCTTTTAGAGATGACTATGAGATGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGGTGAAAAGCCACTGGTGTTACCAGAAGCACCTACCGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGAAGAGTGGCAAGCAGCTGAATGATGCTCATGGTAAAAACACAAAAAGCATAGAGAAAAAAGCTGTTGTTGTTGATGACGAGGAAATCTATGGTTTGGACCTACCCAAGGATATTAAGCCCAAGAAAACCGAAGTTGATGAGGCTACACTGAAGGAAATGAAGAAAGAGGAGGAGATAGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAG.............................................................................................................................................................................GAACGTGAGAAGAAAGCAAAGAAGAAGGGCGGAGCTTCTGCTGCTGGTCAGGAACCAATTGAGGAACCAACTGAAACCCCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGCTGAAACCGCCGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E272182" ref_strand="+" ref_description="SGN-E272182 [cLEN-4-D17]">
      <seq>agtaagtcttttagagatgactatgagaggagactcttgcagtcgcttgatattaggcagctgagcagggacggcaggatgaggaatcctgatgaaaagccactggtgttaccagaagcacctactgtctcccgtgctgaagttccagcaagagctaatgcaaaacccgttaaggaagatcatgcacccgttgatgctgctccgattcagaaagaacagcaagaggttagcggcaagcagctgaatgatgctcgtggtaaaaactcaaaaagcacagagaaaaaagctgttgttgatgatgatgaggaaatctatggtttggacctacacaaggattctaagcccaagaaaatcgaaattgatgaggcaacactgaaggagatgaagaaagaggaggagatggcaaaaaataaacaggctatggagaggaagcgtaagttggccgagaaagcagctgcaaaagctgcaaagaaagctcagctagaagctgaaaagaagctcaaggaacgtgagaagaaagcaaagaagaagagcggagcttctgctgctggtca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="30598" stop="31924"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30898" g_stop="31401" g_length="504"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="504" r_length="504" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31402" i_stop="31574" i_length="173">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31575" g_stop="31624" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="505" r_stop="554" r_length="50" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E272182" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E272182" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30898" e_stop="31401"/>
          <exon e_start="31575" e_stop="31624"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAGGTAATTCTCTCTCTGATTCTTTATAGTCATACCATCTGTGTTGCTCGGACTCTTCAAAAATGTCAAACGAATCCAAAAGTGAAGAGTCCCTGCAACTTAGCTTTCCATTTCCTTGTAGTTTTAGGTTGTAAACGTTTCAGATTTACTTATCTCGTTACTTTGATCCCTTTCAGGAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCA</genome_strand>
        <mrna_strand>AGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAG.............................................................................................................................................................................GAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E727275" ref_strand="+" ref_description="SGN-E727275 [LA14AH12]">
      <seq>cattagaggagactcttgcagtcgcttgatattaggcagctgagcagggacggcaggatgaggaatcctgatgaaaagccactggtgttaccagaagcacctactgtctcccgtgctgaagttccagcaagagctaatgcaaaacccgttaaggaagatcatgcacccgttgatgctgctccgattcagaaagaacagcaagaggttagcggcaagcagctgaatgatgctcgtggtaaaaactcaaaaagcacagagaaaaaagctgttgttgatgatgatgaggaaatctatggtttggacctacacaaggattctaagcccaagaaaatcgaaattgatgaggcaacactgaaggagatgaagaaagaggaggagatggcaaaaaataaacaggctatggagaggaagcgtaagttggccgagaaagcagctgcaaaagctgcaaagaaagctcagctagaagctgaaaagaagctcaaggaacgtgagaagaaagcaaagaagaagagcggagcttctgctgctggtcaggaaccaatcgaggaaccaactgaaacacccgaggaaattgctgaggaagaaaatgcagaggagactgttgaaacagccgttgcacccaaggtcaaggcacggaaagagaacaccatcaggcacagagcaacacgtgcaagaggctccgagcttcccaaagctatactaaagcgcaagaaagcaacaaactactggctatgggcagctgctcctgctgcactcgcgattctggtacttctagtcatcggatacatgtatcttcaaaagtagaaagaggcaggtgggggagagacaaacaaaaaacaaaaactttgttttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="30620" stop="32245"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30919" g_stop="31401" g_length="483"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="483" r_length="483" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31402" i_stop="31574" i_length="173">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31575" g_stop="31945" g_length="371"/>
          <reference_exon_boundary r_type="cDNA" r_start="484" r_stop="854" r_length="371" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E727275" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>854</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E727275" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30919" e_stop="31401"/>
          <exon e_start="31575" e_stop="31945"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAGGTAATTCTCTCTCTGATTCTTTATAGTCATACCATCTGTGTTGCTCGGACTCTTCAAAAATGTCAAACGAATCCAAAAGTGAAGAGTCCCTGCAACTTAGCTTTCCATTTCCTTGTAGTTTTAGGTTGTAAACGTTTCAGATTTACTTATCTCGTTACTTTGATCCCTTTCAGGAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGCAGGT-GGGGAGAGACAAAACAAAAAACAAAAACTTTGTTTTTA</genome_strand>
        <mrna_strand>CATTAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAG.............................................................................................................................................................................GAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGCAGGTGGGGGAGAGAC-AAACAAAAAACAAAAACTTTGTTTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E269263" ref_strand="+" ref_description="SGN-E269263 [cLEM-18-C24]">
      <seq>caggatgaggaatcctgatgaaaagccactggtgttaccagaagcacctactgtctcccgtgctgaagttccagcaagagctaatgcaaaacccgttaaggaagatcatgcacccgttgatgctgctccgattcagaaagaacagcaagaggttagcggcaagcagctgaatgatgctcgtggtaaaaaactcaaaaagcacagagaaaaaagctgttgttgatgatgatgaggaaatctatggtttggacctacacaaggattctaagcccaagaaaatcgaaattgatgaggcaacactgaaggagatgaagaaagaggaggagatggcaaaaaataaacaggctatggagaggaagcgtaagttggccgagaaagcagctgcaaaagctgcaaagaaagctcagctagaagctgaaaagaagctcaaggaacgtgagaagaaagcaaagaagaagagcggagcttctgctgctggtcangaaccaatcgaggaaccaactgaaacacccgaggaaattgctgaggaagaaaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="30672" stop="31980"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30972" g_stop="31401" g_length="430"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="431" r_length="431" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31402" i_stop="31574" i_length="173">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31575" g_stop="31680" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="537" r_length="106" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E269263" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E269263" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30972" e_stop="31401"/>
          <exon e_start="31575" e_stop="31680"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGT-AAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAGGTAATTCTCTCTCTGATTCTTTATAGTCATACCATCTGTGTTGCTCGGACTCTTCAAAAATGTCAAACGAATCCAAAAGTGAAGAGTCCCTGCAACTTAGCTTTCCATTTCCTTGTAGTTTTAGGTTGTAAACGTTTCAGATTTACTTATCTCGTTACTTTGATCCCTTTCAGGAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATG</genome_strand>
        <mrna_strand>CAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAG.............................................................................................................................................................................GAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCANGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E269311" ref_strand="+" ref_description="SGN-E269311 [cLEM-18-H23]">
      <seq>caggatgaggaatcctgatgaaaagccactggtgttaccagaagcacctactgtctcccgtgctgaagttccagcaagagctaatgcaaaacccgttaaggaagatcatgcacccgttgatgctgctccgattcagaaagaacagcaagaggttagcggcaagcagctgaatgatgctcgtggtaaaaaactcaaaaagcacagagaaaaaagctgttgttgatgatgatgaggaaatctatggtttggacctacacaaggattctaagcccaagaaaatcgaaattgatgaggcaacactgaaggagatgaagaaagaggaggagatggcaaaaaataaacaggctatggagaggaagcgtaagttggccgagaaagcagctgcaaaagctgcaaagaaagctcagctagaagctgaaaagaagctcaaggaacgtgagaagaaagcaaagaagaagagcggagcttctgctgctggtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="30672" stop="31923"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30972" g_stop="31401" g_length="430"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="431" r_length="431" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31402" i_stop="31574" i_length="173">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31575" g_stop="31623" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="480" r_length="49" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E269311" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>479</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E269311" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30972" e_stop="31401"/>
          <exon e_start="31575" e_stop="31623"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGT-AAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAGGTAATTCTCTCTCTGATTCTTTATAGTCATACCATCTGTGTTGCTCGGACTCTTCAAAAATGTCAAACGAATCCAAAAGTGAAGAGTCCCTGCAACTTAGCTTTCCATTTCCTTGTAGTTTTAGGTTGTAAACGTTTCAGATTTACTTATCTCGTTACTTTGATCCCTTTCAGGAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTC</genome_strand>
        <mrna_strand>CAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAG.............................................................................................................................................................................GAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E339769" ref_strand="+" ref_description="SGN-E339769 [cTOE-16-B24]">
      <seq>caggatgaggaatcctgatgaaaagccactggtgttaccagaagcacctactgtctcccgtgctgaagttccagcaagagctaatgcaaaacccgttaaggaagatcatgcacccgttgatgctgctccgattcagaaagaacagcaagaggttagcggcaagcagctgaatgatgctcgtggtaaaaactcaaaaagcacagagaaaaaagctgttgttgatgatgatgaggaaatctatggtttggacctacacaaggattctaagcccaagaaaatcgaaattgatgaggcaacactgaaggagatgaagaaagaggaggagatggcaaaaaataaacaggctatggagaggaagcgtaagttggccgagaaagcagctgcaaaagctgcaaagaaagctcagctagaagctgaaaagaagctcaaggaacgtgagaagaaagcaaagaagaagagcggagcttctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="30672" stop="31914"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30972" g_stop="31401" g_length="430"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="430" r_length="430" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31402" i_stop="31574" i_length="173">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31575" g_stop="31614" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="431" r_stop="470" r_length="40" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E339769" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>470</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E339769" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30972" e_stop="31401"/>
          <exon e_start="31575" e_stop="31614"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAGGTAATTCTCTCTCTGATTCTTTATAGTCATACCATCTGTGTTGCTCGGACTCTTCAAAAATGTCAAACGAATCCAAAAGTGAAGAGTCCCTGCAACTTAGCTTTCCATTTCCTTGTAGTTTTAGGTTGTAAACGTTTCAGATTTACTTATCTCGTTACTTTGATCCCTTTCAGGAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTG</genome_strand>
        <mrna_strand>CAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAG.............................................................................................................................................................................GAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E311009" ref_strand="+" ref_description="SGN-E311009 [cLEZ-17-M9]">
      <seq>gtgttaccagaagcacctactgtctcccgtgctgaagttccagcaagagctaatgcaaaacccgttaaggaagatcatgcacccgttgatgctgctccgattcataaagaacagcaagaggttagcggctagcagctgaatgatgctcgtggtaaaaactcaaaaagcacagagaaaaaagctgttgttgatgatgatgaggaaatctatggtttggacctacacaaggattctaagcccaagaaaatcgaaattgatgaggcaacactgaaggagatgaagaaagaggaggagatggcaaaaaataaacaggctatggagaggaagcgtaagttggccgagaaagcagctgcaaaagctgcaaagaaagctcagctagaagctgaaaagaagctcatggaacgtgagaagaaagcaaagaagaagagcggagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="30703" stop="31909"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31003" g_stop="31401" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="399" r_length="399" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31402" i_stop="31574" i_length="173">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.981" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31575" g_stop="31609" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="400" r_stop="434" r_length="35" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E311009" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>434</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E311009" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31003" e_stop="31401"/>
          <exon e_start="31575" e_stop="31609"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAGGTAATTCTCTCTCTGATTCTTTATAGTCATACCATCTGTGTTGCTCGGACTCTTCAAAAATGTCAAACGAATCCAAAAGTGAAGAGTCCCTGCAACTTAGCTTTCCATTTCCTTGTAGTTTTAGGTTGTAAACGTTTCAGATTTACTTATCTCGTTACTTTGATCCCTTTCAGGAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGC</genome_strand>
        <mrna_strand>GTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCATAAAGAACAGCAAGAGGTTAGCGGCTAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCATG.............................................................................................................................................................................GAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E728841" ref_strand="+" ref_description="SGN-E728841 [LA19AE08]">
      <seq>cagaagcacctactgtctcccgtgctgaagttccagcaagagctaatgcaaaacccgttaaggaagatcatgcacccgttgatgctgctccgattcagaaagaacagcaagaggttagcggcaagcagctgaatgatgctcgtggtaaaaactcaaaaagcacagagaaaaaagctgttgttgatgatgatgaggaaatctatggtttggacctacacaaggattctaagcccaagaaaatcgaaattgatgaggcaacactgaaggagatgaagaaagaggaggagatggcaaaaaataaacaggctatggagaggaagcgtaagttggccgagaaagcagctgcaaaagctgcaaagaaagctcagctagaagctgaaaagaagctcaaggaacgtgagaagaaagcaaagaagaagagcggagcttctgctgctggtcaggaaccaatcgaggaaccaactgaaacacccgaggaaattgctgaggaagaaaatgcagaggagactgttgaaacagccgttgcacccaaggtcaaggcacggaaagagaacaccatcaggcacagagcaacacgtgcaagaggctccgagcttcccaaagctatactaaagcgcaagaaagcaacaaactactggctatgggcagctgctcctgctgcactcgcgattctggtacttctagtcatcggatacatgtatcttcaaaagtagaaagaggcaggtggggagagacaaaacaaaaaacaaaaactttgtttttagtgttttaatttttttgttacaaatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="30710" stop="32272"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31010" g_stop="31401" g_length="392"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="392" r_length="392" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31402" i_stop="31574" i_length="173">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31575" g_stop="31972" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="393" r_stop="790" r_length="398" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E728841" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>790</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E728841" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31010" e_stop="31401"/>
          <exon e_start="31575" e_stop="31972"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAGGTAATTCTCTCTCTGATTCTTTATAGTCATACCATCTGTGTTGCTCGGACTCTTCAAAAATGTCAAACGAATCCAAAAGTGAAGAGTCCCTGCAACTTAGCTTTCCATTTCCTTGTAGTTTTAGGTTGTAAACGTTTCAGATTTACTTATCTCGTTACTTTGATCCCTTTCAGGAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGCAGGTGGGGAGAGACAAAACAAAAAACAAAAACTTTGTTTTTAGTGTTTTAATTTTTTGTTTACAAATAC</genome_strand>
        <mrna_strand>CAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAG.............................................................................................................................................................................GAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGCAGGTGGGGAGAGACAAAACAAAAAACAAAAACTTTGTTTTTAGTGTTTTAATTTTTTTGTTACAAATAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E396994" ref_strand="+" ref_description="SGN-E396994 [TUS-44-N1]">
      <seq>aaaacccgttaaggaagatcatgcacccgttgatgctgctccgattcagaaagaacagcaagaggttagcggcaagcagctgaatgatgctcgtggtaaaaactcaaaaagcacagagaaaaaagctgttgttgatgatgatgaggaaatctatggtttggacctacacaaggattctaagcccaagaaaatcgaaattgatgaggcaacactgaaggagatgaagaaagaggaggagatggcaaaaaataaacaggctatggagaggaagcgtaagttggccgagaaagcagctgcaaaagctgcaaagaaagctcagctagaagctgaaaagaagctcaaggaacgtgagaagaaagcaaagaagaagagcggagcttctgctgctggtcaggaaccaatcgaggaaccaactgaaacacccgaggaaattgctgaggaagaaaatgcagaggagactgttgaaacagccgttgcacccaaggtcaaggcacggaaagagaacaccatcaggcacagagcaacacgtgcaagaggctccgagcttcccca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="30759" stop="32083"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31059" g_stop="31401" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="343" r_length="343" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31402" i_stop="31574" i_length="173">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31575" g_stop="31783" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="552" r_length="209" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E396994" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E396994" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31059" e_stop="31401"/>
          <exon e_start="31575" e_stop="31783"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAGGTAATTCTCTCTCTGATTCTTTATAGTCATACCATCTGTGTTGCTCGGACTCTTCAAAAATGTCAAACGAATCCAAAAGTGAAGAGTCCCTGCAACTTAGCTTTCCATTTCCTTGTAGTTTTAGGTTGTAAACGTTTCAGATTTACTTATCTCGTTACTTTGATCCCTTTCAGGAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAA</genome_strand>
        <mrna_strand>AAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAG.............................................................................................................................................................................GAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E281645" ref_strand="+" ref_description="SGN-E281645 [cLER-14-D1]">
      <seq>aaacccgttaaggaagatcatgcacccgttgatgctgctccgattcagaaagaacagcaagaggttagcggcaagcagctgaatgatgctcgtggtaaaaactcaaaaagcacagagaaaaaagctgttgttgatgatgatgaggaaatctatggtttggacctacacaaggattctaagcccaagaaaatcgaaattgatgaggcaacactgaaggagatgaagaaagaggaggagatggcaaaaaataaacaggctatggagaggaagcgtaagttggccgagaaagcagctgcaaaagctgcaaagaaagctcagctagaagctgaaaagaagctcaaggaacgtgagaagaaagcaaagaagaagagcggagcttctgctgctggtcaggaaccaatcgaggaaccaactgaaacacccgatgaaattgctgaggaagaaaatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="30760" stop="31981"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31060" g_stop="31401" g_length="342"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="342" r_length="342" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31402" i_stop="31574" i_length="173">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31575" g_stop="31681" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="449" r_length="107" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E281645" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>449</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E281645" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31060" e_stop="31401"/>
          <exon e_start="31575" e_stop="31681"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAGGTAATTCTCTCTCTGATTCTTTATAGTCATACCATCTGTGTTGCTCGGACTCTTCAAAAATGTCAAACGAATCCAAAAGTGAAGAGTCCCTGCAACTTAGCTTTCCATTTCCTTGTAGTTTTAGGTTGTAAACGTTTCAGATTTACTTATCTCGTTACTTTGATCCCTTTCAGGAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGC</genome_strand>
        <mrna_strand>AAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAG.............................................................................................................................................................................GAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGATGAAATTGCTGAGGAAGAAAATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E734637" ref_strand="+" ref_description="SGN-E734637 [LB13AG09]">
      <seq>gaagatcatgcacccgttgatgctgctccgattcagaaagaacagcaagaggttagcggcaagcagctgaatgatgctcgtggtaaaaactcaaaaagcacagagaaaaaagctgttgttgatgatgatgaggaaatctatggtttggacctacacaaggattctaagcccaagaaaatcgaaattgatgaggcaacactgaaggagatgaagaaagaggaggagatggcaaaaaataaacaggctatggagaggaagcgtaagttggccgagaaagcagctgcaaaagctgcaaagaaagctcagctagaagctgaaaagaagctcaaggaacgtgagaagaaagcaaagaagaagagcggagcttctgctgctggtcaggaaccaatcgaggaaccaactgaaacacccgaggaaattgctgaggaagaaaatgcagaggagactgttgaaacagccgttgcacccaaggtcaaggcacggaaagagaacaccatcaggcacagagcaacacgtgcaagaggctccgagcttcccaaagctatactaaagcgcaagaaagcaacaaactactggctatgggcagctgctcctgctgcactcgcgattctggtacttctagtcatcggatacatgtatcttcaaaagtagaaagaggcaggtggggagagacaaaacaaaaaacaaaaactttgtttttagtgttttaattttttgtttacaaatactgcaatagcaagtactgtttagtttgatcataacaatatttctttttcttgcatcctatatagtttaggatggaaaactcataaatgttttgctggtaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="30772" stop="32372"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31072" g_stop="31401" g_length="330"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="330" r_length="330" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31402" i_stop="31574" i_length="173">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31575" g_stop="32078" g_length="504"/>
          <reference_exon_boundary r_type="cDNA" r_start="331" r_stop="834" r_length="504" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E734637" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>834</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E734637" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31072" e_stop="31401"/>
          <exon e_start="31575" e_stop="32078"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAGGTAATTCTCTCTCTGATTCTTTATAGTCATACCATCTGTGTTGCTCGGACTCTTCAAAAATGTCAAACGAATCCAAAAGTGAAGAGTCCCTGCAACTTAGCTTTCCATTTCCTTGTAGTTTTAGGTTGTAAACGTTTCAGATTTACTTATCTCGTTACTTTGATCCCTTTCAGGAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGCAGGTGGGGAGAGACAAAACAAAAAACAAAAACTTTGTTTTTAGTGTTTTAATTTTTTGTTTACAAATACTGCAATAGCAAGTACTGTTTAGTTTGATCATAACAATATTTCTTTTTCTTGCATCCTATATAGTTTAGGATGGAAAACTCATAAATGTTTTGCTGGTAGATGTGCG</genome_strand>
        <mrna_strand>GAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAG.............................................................................................................................................................................GAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGCAGGTGGGGAGAGACAAAACAAAAAACAAAAACTTTGTTTTTAGTGTTTTAATTTTTTGTTTACAAATACTGCAATAGCAAGTACTGTTTAGTTTGATCATAACAATATTTCTTTTTCTTGCATCCTATATAGTTTAGGATGGAAAACTCATAAATGTTTTGCTGGTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E339299" ref_strand="+" ref_description="SGN-E339299 [cTOF-4-N1]">
      <seq>aagatcatgcacccgttgatgctgctccgattcagaaagaacagcaagaggttagcggcaagcagctgaatgatgctcgtggtaaaaactcaaaaagcacagagaaaaaagctgttgttgatgatgatgaggaaatctatggtttggacctacacaaggattctaagcccaagaaaatcgaaattgatgaggcaacactgaaggagatgaagaaagaggaggagatggcaaaaataaacaggctatggagaggaagcgtaagttggccgagaaagcagctgcaaaagctgcaaagaaagctcagctagaagctgaaaagaagctcaaggaacgtgagaagaaagcaaagaagaagagcggagcttctgctgctggtcaggaaccaatcgaggaaccaactgaaacacccgaggaaattgctgaggaagaaaatgcagaggagactgttgaaacagccgttgcacccaaggtcaaggcacggaaagagaacaccatcaggcacagagcaacacgtgcaagaggctccgagcttcccaaagctatactaaagcgcaagaaagcaacaaactactggctatgggcagctgctcctgctgcactcgcgattctggtacttctagtcatcggatacatgtatcttcaaaagtagaaagaggcaggtggnngagagacaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="30773" stop="32209"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31073" g_stop="31401" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="328" r_length="328" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31402" i_stop="31574" i_length="173">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31575" g_stop="31922" g_length="348"/>
          <reference_exon_boundary r_type="cDNA" r_start="329" r_stop="677" r_length="349" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E339299" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>677</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E339299" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31073" e_stop="31401"/>
          <exon e_start="31575" e_stop="31922"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAGGTAATTCTCTCTCTGATTCTTTATAGTCATACCATCTGTGTTGCTCGGACTCTTCAAAAATGTCAAACGAATCCAAAAGTGAAGAGTCCCTGCAACTTAGCTTTCCATTTCCTTGTAGTTTTAGGTTGTAAACGTTTCAGATTTACTTATCTCGTTACTTTGATCCCTTTCAGGAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGCAGGTGG-GGAGAGACAAAAC</genome_strand>
        <mrna_strand>AAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGC-AAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAG.............................................................................................................................................................................GAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGCAGGTGGNNGAGAGACAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E347982" ref_strand="+" ref_description="SGN-E347982 [cTOF-31-L14]">
      <seq>aagatcatgcacccgttgatgctgctccgattcagaaagaacagcaagaggttagcggcaagcagctgaatgatgctcgtggtaaaaactcaaaaagcacagagaaaaaagctgttgttgatgatgatgaggaaatctatggtttggacctacacaaggattctaagcccaagaaaatcgaaattgatgaggcaacactgaaggagatgaagaaagaggaggagatggcaaaaataaacaggctatggagaggaagcgtaagttggccgagaaagcagctgcaaaagctgcaaagaaagctcagctagaagctgaaaagaagctcaaggaacgtgagaagaaagcaaagaagaagagcggagcttctgctgctggtcaggaaccaatcgaggaaccaactgaaacacccgaggaaattgctgaggaagaaaatgcagaggagactgttgaaacagccgttgcacccaaggtcaaggcacggaaagagaacaccatcaggcacagagcaacacgtgcaagaggctccgagcttcccaaagctatactaaagcgcaagaaagcaacaaactactggctatgggcagctgctcctgctgactcgcatntctggtacttctagtcatcggatacatgtatcttcaaagtaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="30773" stop="32196"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31073" g_stop="31401" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="328" r_length="328" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31402" i_stop="31574" i_length="173">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31575" g_stop="31896" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="329" r_stop="648" r_length="320" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E347982" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>651</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E347982" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31073" e_stop="31401"/>
          <exon e_start="31575" e_stop="31896"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAGGTAATTCTCTCTCTGATTCTTTATAGTCATACCATCTGTGTTGCTCGGACTCTTCAAAAATGTCAAACGAATCCAAAAGTGAAGAGTCCCTGCAACTTAGCTTTCCATTTCCTTGTAGTTTTAGGTTGTAAACGTTTCAGATTTACTTATCTCGTTACTTTGATCCCTTTCAGGAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGA</genome_strand>
        <mrna_strand>AAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGC-AAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAG.............................................................................................................................................................................GAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTG-ACTCGCATNTCTGGTACTTCTAGTCATCGGATACATGTATCTTC-AAAGTAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E343351" ref_strand="+" ref_description="SGN-E343351 [cTOF-19-C13]">
      <seq>acccgttgatgctgctccgattcagaaagaacagcaagaggttagcggcaagcagctgaatgatgctcgtggtaaaaactcaaaaagcacagagaaaaaagctgttgttgatgatgatgaggaaatctatggtttggacctacacaaggattctaagcccaagaaaatcgaaattgatgaggcaacactgaaggagatgaagaaagaggaggagatggcaaaaaaataaacaggctatggagaggaagcgtaagttggccgagaaagcagctgcaaaagctgcaaagaaagctcagctagaagctgaaaagaagctcaaggaacgtgagaagaaagcaaagaagaagagcggagcttctgctgctggtcaggaaccaatcgaggaaccaactgaaacacccgaggaaattgctgaggaagaaaatgcagaggagactgttgaaacagccgttgcacccaaggtcaacgcacggaaagagaacaccatcaggcacagagcaacacgtgcaagaggctccgagcttcccaaagctatactaaagcgcaagaaagcaacaaactactggctatgggcagctgctcctgctgcactcgcgattctggtacttctagtcatcggatacatgtatcttcaaaagtagaaagaggcaggtggggagagacaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="30783" stop="32220"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31083" g_stop="31401" g_length="319"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="320" r_length="320" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31402" i_stop="31574" i_length="173">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31575" g_stop="31920" g_length="346"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="666" r_length="346" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E343351" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>665</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E343351" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31083" e_stop="31401"/>
          <exon e_start="31575" e_stop="31920"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGC-AAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAGGTAATTCTCTCTCTGATTCTTTATAGTCATACCATCTGTGTTGCTCGGACTCTTCAAAAATGTCAAACGAATCCAAAAGTGAAGAGTCCCTGCAACTTAGCTTTCCATTTCCTTGTAGTTTTAGGTTGTAAACGTTTCAGATTTACTTATCTCGTTACTTTGATCCCTTTCAGGAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGCAGGTGGGGAGAGACAAA</genome_strand>
        <mrna_strand>ACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAG.............................................................................................................................................................................GAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAACGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGCAGGTGGGGAGAGACAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E343352" ref_strand="+" ref_description="SGN-E343352 [cTOF-19-C15]">
      <seq>acccgttgatgctgctccgattcagaaagaacagcaagaggttagcggcaagcagctgaatgatgctcgtggtaaaaactcaaaaagcacagagaaaaaagctgttgttgatgatgatgaggaaatctatggtttggacctacacaaggattctaagcccaagaaaatcgaaattgatgaggcaacactgaaggagatgaagaaagaggaggagatggcaaaaaaataaacaggctatggagaggaagcgtaagttggccgagaaagcagctgcaaaagctgcaaagaaagctcagctagaagctgaaaagaagctcaaggaacgtgagaagaaagcaaagaagaagagcggagcttctgctgctggtcaggaaccaatcgaggaaccaactgaaacacccgaggaaattgctgaggaagaaaatgcagaggagactgttgaaacagccgttgcacccaaggtcaaggcacggaaagagaacaccatcaggcacagagcaacacgtgcaagaggctccgagcttcccaaagctatactaaagcgcaagaaagcaacaaactactggctatgggcagctgctcctgctgcactcgcgattctggtacttctagtcatcggatacatgtatcttcaaaagtagaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="30783" stop="32198"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31083" g_stop="31401" g_length="319"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="320" r_length="320" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31402" i_stop="31574" i_length="173">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31575" g_stop="31898" g_length="324"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="644" r_length="324" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E343352" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>643</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E343352" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31083" e_stop="31401"/>
          <exon e_start="31575" e_stop="31898"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGC-AAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAGGTAATTCTCTCTCTGATTCTTTATAGTCATACCATCTGTGTTGCTCGGACTCTTCAAAAATGTCAAACGAATCCAAAAGTGAAGAGTCCCTGCAACTTAGCTTTCCATTTCCTTGTAGTTTTAGGTTGTAAACGTTTCAGATTTACTTATCTCGTTACTTTGATCCCTTTCAGGAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAA</genome_strand>
        <mrna_strand>ACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAG.............................................................................................................................................................................GAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E339442" ref_strand="+" ref_description="SGN-E339442 [cTOF-4-J15]">
      <seq>ctgctccgattcagaaagaacagcaagaggttagcggcaagcagctgaatgatgctcgtggtaaaaactcaaaaagcacagagaaaaaagctgttgttgatgatgatgaggaaatctatggtttggacctacacaaggattctaagcccaagaaaatcgaaattgatgaggcaacactgaaggagatgaagaaagaggaggagatggcaaaaaataaacaggctatggagaggaagcgtaagttggccgagaaagcagctgcaaaagctgcaaagaaagctcagctagaagctgaaaagaagctcaaggaacgtgagaagaaagcaaagaagaagagcggagcttctgctgctggtcaggaaccaatcgaggaaccaactgaaacacccgaggaaattgctgaggaagaaaatgcagaggagactgttgaaacagccgttgcacccaaggtcaaggcacggaaagagaacaccatcaggcacagagcaacacgtgcaagaggctccgagcttcccaaagctatactaaagcgcaagaaagcaacaaactactggctatgggcagctgctcctgctgcactcgcgattctggtacttctagcatcggatacatgtatcttcaaaagtagaaaaggcaggtggggagagacaaaacaaaaacaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="30794" stop="32233"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31094" g_stop="31401" g_length="308"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="308" r_length="308" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31402" i_stop="31574" i_length="173">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31575" g_stop="31933" g_length="359"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="664" r_length="356" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E339442" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>667</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E339442" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31094" e_stop="31401"/>
          <exon e_start="31575" e_stop="31933"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAGGTAATTCTCTCTCTGATTCTTTATAGTCATACCATCTGTGTTGCTCGGACTCTTCAAAAATGTCAAACGAATCCAAAAGTGAAGAGTCCCTGCAACTTAGCTTTCCATTTCCTTGTAGTTTTAGGTTGTAAACGTTTCAGATTTACTTATCTCGTTACTTTGATCCCTTTCAGGAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGCAGGTGGGGAGAGACAAAACAAAAAACAAAA</genome_strand>
        <mrna_strand>CTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAG.............................................................................................................................................................................GAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAG-CATCGGATACATGTATCTTCAAAAGTAGAAA-AGGCAGGTGGGGAGAGACAAAAC-AAAAACAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E344268" ref_strand="+" ref_description="SGN-E344268 [cTOF-16-I9]">
      <seq>ctgctccgattcagaaagaacagcaagaggttagcggcaagcagctgaatgatgctcgtggtaaaaactcaaaaagcacagagaaaaaagctgttgttgatgatgatgaggaaatctatggtttggacctacacaaggattctaagcccaagaaaatcgaaattgatgaggcaacactgaaggagatgaagaaagaggaggagatggcaaaaaataaacaggctatggagaggaagcgtaagttggccgagaaagcagctgcaaaagctgcaaagaaagctcagctagaagctgaaaagaagctcaaggaacgtgagaagaaagcaaagaagaagagcggagcttctgctgctggtcaggaaccaatcgaggaaccaactgaaacacccgaggaaattgctgaggaagaaaatgcagaggagactgttgaaacagccgttgcacccaaggtcaaggcacggaaagagaacaccatcaggcacagagcaacacgtgcaagaggctccgagcttcccaaagctatactaaagcgcaagaaagcaacaaactactggctatgggcagctgctcctgctgcactcgcgattctggtacttctagtcatcggatacatgtatcttcaaaagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="30794" stop="32193"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31094" g_stop="31401" g_length="308"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="308" r_length="308" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31402" i_stop="31574" i_length="173">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31575" g_stop="31893" g_length="319"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="627" r_length="319" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E344268" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>627</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E344268" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31094" e_stop="31401"/>
          <exon e_start="31575" e_stop="31893"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAGGTAATTCTCTCTCTGATTCTTTATAGTCATACCATCTGTGTTGCTCGGACTCTTCAAAAATGTCAAACGAATCCAAAAGTGAAGAGTCCCTGCAACTTAGCTTTCCATTTCCTTGTAGTTTTAGGTTGTAAACGTTTCAGATTTACTTATCTCGTTACTTTGATCCCTTTCAGGAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGT</genome_strand>
        <mrna_strand>CTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAG.............................................................................................................................................................................GAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E268274" ref_strand="+" ref_description="SGN-E268274 [cLEM-3-O24]">
      <seq>aaactcaaaaagcacagagaaaaaagctgttgttgatgatgatgaggaaatctatggtttggacctacacaaggattctaagcccaagaaaatcgaaattgatgaggcaacactgaaggagatgaagaaagaggaggagatggcaaaaaataaacaggctatggagaggaagcgtaagttggccgagaaagcagctgcaaaagctgcaaagaaagctcagctagaagctgaaaagaagctcaaggaacgtgagaagaaagcaaagaagaagagcggagcttctgctgctggtcaggaaccaatcgaggaaccaactgaaacacccgaggaaattgctgatgaagaaaatgcagaggagactgttgaaacagccgctgcacccaaggtcaaggcacggaaagagaacaccatcatgcacagagcaacacg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="30858" stop="32059"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31158" g_stop="31401" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="244" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31402" i_stop="31574" i_length="173">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31575" g_stop="31759" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="429" r_length="185" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E268274" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>429</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E268274" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31158" e_stop="31401"/>
          <exon e_start="31575" e_stop="31759"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAGGTAATTCTCTCTCTGATTCTTTATAGTCATACCATCTGTGTTGCTCGGACTCTTCAAAAATGTCAAACGAATCCAAAAGTGAAGAGTCCCTGCAACTTAGCTTTCCATTTCCTTGTAGTTTTAGGTTGTAAACGTTTCAGATTTACTTATCTCGTTACTTTGATCCCTTTCAGGAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACG</genome_strand>
        <mrna_strand>AAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAG.............................................................................................................................................................................GAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGATGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGCTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCATGCACAGAGCAACACG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E601613" ref_strand="-" ref_description="SGN-E601613 [54655]">
      <seq>ttgttgttgatgacgaggaaatctatggtttggacctacccaaggatattaagcccaagaaaaccgaagttgatgaggctacactgaaggaaatgaagaaagaggaggagatagcaaaaaataaacaggctatggagaggaagcgtaagttggccgagaaagcagctgcaaaagctgcaaagaaagctcagctagaagctgaaaagaagctcaaggaacgtgagaagaaagcaaagaagaagggtggatcttctgctgctggtcaggaaccaaccgaggaaccaactgaaacacccgaggaaattgctgaggaagaaaatgcagaggagactgttgaaacagccgttgcacccaaggtcaaggcacggaaagataacaccatcaggcacagagcaacacgcgcaagagggtctgagcttcccaaatctatactaaagcgcaagaaagcaacaaactactggctatgggcagctgctcctgctgcactcgcgattctggtacttctagtcatcggatacatgtatcttcaaaagtagaaagaggcgggggaaactggagagtgaaaacaaaacaaaacaaaaaacaaaaactttggctttagtgtttttttttttttggtttacaatactgcaatagcaagtactgtttagtttgatcataacagtatttcttttttcttgcatcctatatagtttaggatggaaactcataaatgtgttgctggtagatgtgcggcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="30887" stop="32381"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31187" g_stop="31401" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="215" r_length="215" r_score="0.953"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31402" i_stop="31574" i_length="173">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31575" g_stop="32081" g_length="507"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="737" r_length="522" r_score="0.893"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E601613" ref_strand="-">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>722</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E601613" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="31187" e_stop="31401"/>
          <exon e_start="31575" e_stop="32081"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAGGTAATTCTCTCTCTGATTCTTTATAGTCATACCATCTGTGTTGCTCGGACTCTTCAAAAATGTCAAACGAATCCAAAAGTGAAGAGTCCCTGCAACTTAGCTTTCCATTTCCTTGTAGTTTTAGGTTGTAAACGTTTCAGATTTACTTATCTCGTTACTTTGATCCCTTTCAGGAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGC--AGG----T-G-G-G-G---A-GAGACAAAACAAAAAACAAAAACTTTGTTTTTAGTG-TTTTAATTTTTT-GTTTACAAATACTGCAATAGCAAGTACTGTTTAGTTTGATCATAACAATATTTC-TTTTTCTTGCATCCTATATAGTTTAGGATGGAAAACTCATAAATGTTTTGCTGGTAGATGTGCGGCC</genome_strand>
        <mrna_strand>TTGTTGTTGATGACGAGGAAATCTATGGTTTGGACCTACCCAAGGATATTAAGCCCAAGAAAACCGAAGTTGATGAGGCTACACTGAAGGAAATGAAGAAAGAGGAGGAGATAGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAG.............................................................................................................................................................................GAACGTGAGAAGAAAGCAAAGAAGAAGGGTGGATCTTCTGCTGCTGGTCAGGAACCAACCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGATAACACCATCAGGCACAGAGCAACACGCGCAAGAGGGTCTGAGCTTCCCAAATCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGCGGGGGAAACTGGAGAGTGAAAACAAAACAAAACAAAAAACAAAAACTTTGGCTTTAGTGTTTTTTTTTTTTTGGTTTAC-AATACTGCAATAGCAAGTACTGTTTAGTTTGATCATAACAGTATTTCTTTTTTCTTGCATCCTATATAGTTTAGGATGG-AAACTCATAAATGTGTTGCTGGTAGATGTGCGGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E268299" ref_strand="+" ref_description="SGN-E268299 [cLEM-3-K10]">
      <seq>atgatgaggaaatctatggtttggacctacacaaggattctaagcccaagaaaatcgaaattgatgaggcaacactgaaggagatgaagaaagaggaggagatggcaaaaaataaacaggctatggagaggaagcgtaagttggccgagaaagcagctgcaaaagctgcaaagaaagctcagctagaagctgaaaagaagctcaaggaacgtgagaagaaagcaaagaagaagagcggagcttctgctgctggtcaggaaccaatcgaggaaccaactgaaacacccgaggaaattgctgaggaagaaaatgcagaggagactgttgaaacagccgttgcacccaaggtcaaggcacggaaagagaacaccatcaggcacagagcaacacgtgcaagaggctccgagcttcccaaagctatactaaagcgcaagaaagcaacaaactactggctatgggcagctgctcctgctgcactcgcgattctggtacttctagtcatcggatacatgtatcttcaaaagtagaaagaggcaggtggggagagacaaaacaaaaaacaaaaactttgtttttagtgttttaattttttgtttacaaatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="30896" stop="32273"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31196" g_stop="31401" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="206" r_length="206" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31402" i_stop="31574" i_length="173">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31575" g_stop="31973" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="605" r_length="399" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E268299" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>605</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E268299" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31196" e_stop="31401"/>
          <exon e_start="31575" e_stop="31973"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAGGTAATTCTCTCTCTGATTCTTTATAGTCATACCATCTGTGTTGCTCGGACTCTTCAAAAATGTCAAACGAATCCAAAAGTGAAGAGTCCCTGCAACTTAGCTTTCCATTTCCTTGTAGTTTTAGGTTGTAAACGTTTCAGATTTACTTATCTCGTTACTTTGATCCCTTTCAGGAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGCAGGTGGGGAGAGACAAAACAAAAAACAAAAACTTTGTTTTTAGTGTTTTAATTTTTTGTTTACAAATACT</genome_strand>
        <mrna_strand>ATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAG.............................................................................................................................................................................GAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGCAGGTGGGGAGAGACAAAACAAAAAACAAAAACTTTGTTTTTAGTGTTTTAATTTTTTGTTTACAAATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E585237" ref_strand="+" ref_description="SGN-E585237 [66957]">
      <seq>tggacctacccaaggatattaagcccaagaaaactgaagttgatgaggctacactgaaggaaatgaagaaagaggaggagatagcaaaaaataaacaggctatggagaggaagcgtaagttggccgagaaagcagctgcaaaagctgcaaagaaagctcagctagaagctgaaaagaagctcaaggaacgtgagaagaaagcaaagaagaagggtggatcttctgctgctggtcaggaaccaaccgaggaaccaactgaaacacccgaggaaattgctgaggaagaaaatgcagaggagactgttgaagcaaccgttgcacccaaggtcaaggcacggaaagataacaccatcaggcacagagcaacacgcgcaagaggctccgagcttcccaaatctatactaaagcgcaagaaagcaacaaactactggctatgggcagctgctcctgctgcactcgcgattctggtacttctagtcatcggatacatgtatcttcaaaagtagaaagaggtgggggagagtggagagtgaaaacaaaacaaaaaacaaaaactttggctttagtgtctttttttacaatactgcaatagcaagtactgtttagtttgatcataacaatatttcttttttcttgcatcctatatagtttaggatggaaaactcataaatgtgttgctggtagatgtgcggcctatcttgagattacttactgagagacagtctac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="30917" stop="32415"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31217" g_stop="31401" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="185" r_length="185" r_score="0.951"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31402" i_stop="31574" i_length="173">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31575" g_stop="32115" g_length="541"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="727" r_length="542" r_score="0.921"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E585237" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>726</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E585237" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31217" e_stop="31401"/>
          <exon e_start="31575" e_stop="32115"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAGGTAATTCTCTCTCTGATTCTTTATAGTCATACCATCTGTGTTGCTCGGACTCTTCAAAAATGTCAAACGAATCCAAAAGTGAAGAGTCCCTGCAACTTAGCTTTCCATTTCCTTGTAGTTTTAGGTTGTAAACGTTTCAGATTTACTTATCTCGTTACTTTGATCCCTTTCAGGAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGA-G-GCAGGTG-G-GGAGAGACAAAACAAAAAACAAAAACTTTGTTTTTAGTGTTTTAAT-TTTTTGTTTACAAATACTGCAATAGCAAGTACTGTTTAGTTTGATCATAACAATATTTC-TTTTTCTTGCATCCTATATAGTTTAGGATGGAAAACTCATAAATGTTTTGCTGGTAGATGTGCGGCCTATCTTGAGATTACTTACTGGAGAGACAGTCTAC</genome_strand>
        <mrna_strand>TGGACCTACCCAAGGATATTAAGCCCAAGAAAACTGAAGTTGATGAGGCTACACTGAAGGAAATGAAGAAAGAGGAGGAGATAGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAG.............................................................................................................................................................................GAACGTGAGAAGAAAGCAAAGAAGAAGGGTGGATCTTCTGCTGCTGGTCAGGAACCAACCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAGCAACCGTTGCACCCAAGGTCAAGGCACGGAAAGATAACACCATCAGGCACAGAGCAACACGCGCAAGAGGCTCCGAGCTTCCCAAATCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGTGGGGGAGAGTGGAGAGTGAAAACAAAACA-AAAAACAAAAACTTT-G-GCTTTAGTGTCTTTTTTTAC-AATACTGCAATAGCAAGTACTGTTTAGTTTGATCATAACAATATTTCTTTTTTCTTGCATCCTATATAGTTTAGGATGGAAAACTCATAAATGTGTTGCTGGTAGATGTGCGGCCTATCTTGAGATTACTTACT-GAGAGACAGTCTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E610472" ref_strand="+" ref_description="SGN-E610472 [57634]">
      <seq>ttcggcacgagggagatgcaaaaaataaacaggctatggagaggaagcgtaagttggccgagaaagcagctgcaaaagctgcaaagaaagctcagctagaagctgaaaagaagctcaaggaacgtgagaagaaagcaaagaagaagggtggatcttctgctgctggtcaggaaccaaccgaggaaccaactgaaacacccgaggaaattgctgaggaagaaaatgcagaggagactgttgaaacagccgttgcacccaaggtcaaggcacggaaagataacaccatcaggcacagagcaacacgcgcaagagggtctgagcttcccaaatctatactaaagcgcaagaaagcaacaaactactggctatgggcagctgctcctgctgcactcgcgattctggtacttctagtcatcggatacatgtatcttcaaaagtagaaagaggcgggggaaactggagagtgaaaacaaaacaaaacaaaaaacaaaaactttggctttagtgtttttttttttttggtttacaatactgcaatagcaagtactgtttagtttgatcataacagtatttcttttttcttgcatcctatatagtttaggatggaaaactcataaatgtgttgctggtag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="30984" stop="32371"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31294" g_stop="31401" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="119" r_length="107" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31402" i_stop="31574" i_length="173">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31575" g_stop="32071" g_length="497"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="632" r_length="513" r_score="0.893"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E610472" ref_strand="+">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>605</cumulative_length_of_scored_exons>
        <coverage percentage="0.957" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E610472" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31294" e_stop="31401"/>
          <exon e_start="31575" e_stop="32071"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAGGTAATTCTCTCTCTGATTCTTTATAGTCATACCATCTGTGTTGCTCGGACTCTTCAAAAATGTCAAACGAATCCAAAAGTGAAGAGTCCCTGCAACTTAGCTTTCCATTTCCTTGTAGTTTTAGGTTGTAAACGTTTCAGATTTACTTATCTCGTTACTTTGATCCCTTTCAGGAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGC--AGG----T-G-G-G-G---A-GAGACAAAACAAAAAACAAAAACTTTGTTTTTAGTG-TTTTAATTTTTT-GTTTACAAATACTGCAATAGCAAGTACTGTTTAGTTTGATCATAACAATATTTC-TTTTTCTTGCATCCTATATAGTTTAGGATGGAAAACTCATAAATGTTTTGCTGGTAG</genome_strand>
        <mrna_strand>GAGAT-GCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAG.............................................................................................................................................................................GAACGTGAGAAGAAAGCAAAGAAGAAGGGTGGATCTTCTGCTGCTGGTCAGGAACCAACCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGATAACACCATCAGGCACAGAGCAACACGCGCAAGAGGGTCTGAGCTTCCCAAATCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGCGGGGGAAACTGGAGAGTGAAAACAAAACAAAACAAAAAACAAAAACTTTGGCTTTAGTGTTTTTTTTTTTTTGGTTTAC-AATACTGCAATAGCAAGTACTGTTTAGTTTGATCATAACAGTATTTCTTTTTTCTTGCATCCTATATAGTTTAGGATGGAAAACTCATAAATGTGTTGCTGGTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E580576" ref_strand="+" ref_description="SGN-E580576 [5819]">
      <seq>aaacaggctatggagaggaagcgtaagttggccgagaaagcagctgcaaaagctgcaaagaaagctcagctagaagctgaaaagaagctcaaggcaacgtgagaagaaagcaaagaagaagggtggatcttctgctgctggtcaggaaccaaccgaggaaccaactgaaacacccgaggaaattgctgaggaagaaaatgcagaggagactgttgaaacagccgttgcacccaaggtcaaggcacggaaagataacaccatcaggcacagagcaacacgcgcaagagggtctgagcttcccaaatctatactaaagcgcaagaaagcaacaaactactggctatgggcagctgctcctgctgcactcgcgattctggtacttctagtcatcggatacatgtatcttcaaagagtagaaagaggcggcggaaactggaggagtgaaaacaaaacaaaacagagaacaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="31009" stop="32209"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31309" g_stop="31401" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="93" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31402" i_stop="31574" i_length="173">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31575" g_stop="31905" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="94" r_stop="426" r_length="333" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E580576" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>424</cumulative_length_of_scored_exons>
        <coverage percentage="0.908" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E580576" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31309" e_stop="31401"/>
          <exon e_start="31575" e_stop="31905"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAGGTAATTCTCTCTCTGATTCTTTATAGTCATACCATCTGTGTTGCTCGGACTCTTCAAAAATGTCAAACGAATCCAAAAGTGAAGAGTCCCTGCAACTTAGCTTTCCATTTCCTTGTAGTTTTAGGTTGTAAACGTTTCAGATTTACTTATCTCGTTACTTTGATCCCTTTCAGG-AACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAA-AGTAGAAAGAGGCAG</genome_strand>
        <mrna_strand>AAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAG.............................................................................................................................................................................GCAACGTGAGAAGAAAGCAAAGAAGAAGGGTGGATCTTCTGCTGCTGGTCAGGAACCAACCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGATAACACCATCAGGCACAGAGCAACACGCGCAAGAGGGTCTGAGCTTCCCAAATCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAGAGTAGAAAGAGGCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E291534" ref_strand="+" ref_description="SGN-E291534 [cLET-6-O19]">
      <seq>gtaagttggccgagaaagcagctgcaaaagctgcaaagaaagctcagctagaagctgaaaagaagctcaaggaacgtgagaagaaagcaaagaagaagagcggagcttctgctgctggtcaggaaccaatcgaggaaccaactgaaacacccgaggaaattgctgaggaagaaaatgcagaggagactgttgaaacagccgttgcacccaaggtcaaggcacggaaagagaacaccatcaggcacagagcaacacgtgcaagaggctccgagcttcccaaagctatactaaagcgcaagaaagcaacaaactactggctatgggcagctgctcctgctgcactcgcgattctggtacttctagtcatcggatacatgtatcttcaaaagtagaaagaggcaggtggggagagacaaaacaaaaaacaaaaactttgtttttagtgttttaattgtttgtttacaaatactgcaatagcaagtactggttagtttgatcataacaatatttctttttcttgcatcctatatagtttaggatggaaaactcataaatgttttgctggtagatgtgcggcctatcttnngagatactactggagagacagtctacatgttaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="31031" stop="32420"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31331" g_stop="31401" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="71" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31402" i_stop="31574" i_length="173">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31575" g_stop="32117" g_length="543"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="614" r_length="543" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E291534" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>614</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E291534" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31331" e_stop="31401"/>
          <exon e_start="31575" e_stop="32117"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAGGTAATTCTCTCTCTGATTCTTTATAGTCATACCATCTGTGTTGCTCGGACTCTTCAAAAATGTCAAACGAATCCAAAAGTGAAGAGTCCCTGCAACTTAGCTTTCCATTTCCTTGTAGTTTTAGGTTGTAAACGTTTCAGATTTACTTATCTCGTTACTTTGATCCCTTTCAGGAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGCAGGTGGGGAGAGACAAAACAAAAAACAAAAACTTTGTTTTTAGTGTTTTAATTTTTTGTTTACAAATACTGCAATAGCAAGTACTGTTTAGTTTGATCATAACAATATTTCTTTTTCTTGCATCCTATATAGTTTAGGATGGAAAACTCATAAATGTTTTGCTGGTAGATGTGCGGCCTATCTTGAGATTACTTACTGGAGAGACAGTCTACAT</genome_strand>
        <mrna_strand>GTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAG.............................................................................................................................................................................GAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGCAGGTGGGGAGAGACAAAACAAAAAACAAAAACTTTGTTTTTAGTGTTTTAATTGTTTGTTTACAAATACTGCAATAGCAAGTACTGGTTAGTTTGATCATAACAATATTTCTTTTTCTTGCATCCTATATAGTTTAGGATGGAAAACTCATAAATGTTTTGCTGGTAGATGTGCGGCCTATCTTNNGAGATACTACTGGAGAGACAGTCTACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E226414" ref_strand="+" ref_description="SGN-E226414 [cLEL-26-J17](-)">
      <seq>ctcaaggaacgtaagaagaaagcaaagaaaaagagcggagcttctgctgctggtcaggaaccaatcgaggaaccaactgaaacaccccagtaaattgctgaggaagaaaatgcagaggagactgttgaaacagccgttgcacccaaggtcaaggcacggaaagagaacaccatcaggcacagagcaacacgtgcaagaggcaccgagcttcccaaagctatactaaagcgcaagaaagcaacaaactactggctatgggcagctgctcctgctgcactcgcgattctggtacttctagtcatcggatacatgtatcttcaaaagtagaaagaggcaggtggggagagacaaaacaaaaaacaaaaactttgtttttagtgttttaattttttgtttacaaatactgcaatagcaagtactgtttagtttgatcaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="31271" stop="34755"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31396" g_stop="31401" g_length="6"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="6" r_length="6" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31402" i_stop="31574" i_length="173">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.981" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31575" g_stop="32007" g_length="433"/>
          <reference_exon_boundary r_type="cDNA" r_start="7" r_stop="439" r_length="433" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32008" i_stop="32499" i_length="492">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="32500" g_stop="32512" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="440" r_stop="452" r_length="13" r_score="0.846"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E226414" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>452</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E226414" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31396" e_stop="31401"/>
          <exon e_start="31575" e_stop="32007"/>
          <exon e_start="32500" e_stop="32512"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCAAGGTAATTCTCTCTCTGATTCTTTATAGTCATACCATCTGTGTTGCTCGGACTCTTCAAAAATGTCAAACGAATCCAAAAGTGAAGAGTCCCTGCAACTTAGCTTTCCATTTCCTTGTAGTTTTAGGTTGTAAACGTTTCAGATTTACTTATCTCGTTACTTTGATCCCTTTCAGGAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGCAGGTGGGGAGAGACAAAACAAAAAACAAAAACTTTGTTTTTAGTGTTTTAATTTTTTGTTTACAAATACTGCAATAGCAAGTACTGTTTAGTTTGATCATAACAATATTTCTTTTTCTTGCATCCTATATAGTTTAGGATGGAAAACTCATAAATGTTTTGCTGGTAGATGTGCGGCCTATCTTGAGATTACTTACTGGAGAGACAGTCTACATGTTTTTCTTTTGTTGCTGTAGTTGATATTATATTGACATTTTGCTTAATCGTCGACTTAGCATTTGATCGTAGATTTAGTTGAAACTTTTTAAAAAAAGAATGGTTGGACATGCCATTTGATATTTCGGGAGTGGAAGTGAAATTTCACCGAAAAATCGGTATGGATTATATTTTTGAAAGCCTACTTTCAAAATCTATGATCAAACGGGAGTTCGATTATAAAATGGTGACATGAGGGATTATTAAGTTCTACAAAATTTGTATAACGCTGTAATAATATACCAAGAAAGCTTTGATTTTGCTGATATTATTAAAATATTTACTTCTTTTTATCACCAATTTGTTACTTCTCTCTATAAAATCTAATTGTTAAAATTTGACAAAAAAGAAAGAA</genome_strand>
        <mrna_strand>CTCAAG.............................................................................................................................................................................GAACGTAAGAAGAAAGCAAAGAAAAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCCAGTAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCACCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGCAGGTGGGGAGAGACAAAACAAAAAACAAAAACTTTGTTTTTAGTGTTTTAATTTTTTGTTTACAAATACTGCAATAGCAAGTACTGTTTAGTTTGATCAAAAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E580796" ref_strand="+" ref_description="SGN-E580796 [6039]">
      <seq>ttttgttttgtttttcaaactccagtcgccccatctctttctacttttgaagatacatgtatccgatgactagaagtaccaaatggcgagtgcacagacactgccctagccgtagtttgttgctttcttgcgctttagtatagatttgggagctcgggcctcttgcgcgtgttgctctgtgcctgatggtgttatctttccgtgccttgactttgggtgcacggctgtttcacagtctcctctgcgttttcttcctcagcatttcctcgggtgtgtcagttggttcctcgattggttcctgaccagcagcgaagctccgccttcttctttgctttcttctca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="32201" stop="31280"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31901" g_stop="31580" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="35" r_stop="342" r_length="308" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E580796" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>322</cumulative_length_of_scored_exons>
        <coverage percentage="0.942" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E580796" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31901" e_stop="31580"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTTTCTACTTTTGAAGATACATGTATCCGATGACTAGAAGTACCAGAATCGCGAGTGCAGCAGGAGCAGCTGCCCATAGCCAGTAGTTTGTTGCTTTCTTGCGCTTTAGTATAGCTTTGGGAAGCTCGGAGCCTCTTGCACGTGTTGCTCTGTGCCTGATGGTGTTCTCTTTCCGTGCCTTGACCTTGGGTGCAACGGCTGTTTCAACAGTCTCCTCTGCATTTTCTTCCTCAGCAATTTCCTCGGGTGTTTCAGTTGGTTCCTCGATTGGTTCCTGACCAGCAGCAGAAGCTCCGCTCTTCTTCTTTGCTTTCTTCTCA</genome_strand>
        <mrna_strand>CTCTTTCTACTTTTGAAGATACATGTATCCGATGACTAGAAGTACCA-AATGGCGAGTGCA-CA-GA-CA-CTGCCC-TAGCC-GTAGTTTGTTGCTTTCTTGCGCTTTAGTATAGATTTGGG-AGCTCGG-GCCTCTTGCGCGTGTTGCTCTGTGCCTGATGGTGTTATCTTTCCGTGCCTTGACTTTGGGTGC-ACGGCTGTTTC-ACAGTCTCCTCTGCGTTTTCTTCCTCAGC-ATTTCCTCGGGTGTGTCAGTTGGTTCCTCGATTGGTTCCTGACCAGCAGC-GAAGCTCCGC-CTTCTTCTTTGCTTTCTTCTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E286386" ref_strand="-" ref_description="SGN-E286386 [cLES-11-L9]">
      <seq>agaagaagagcggagcttctgctgctggtcaggaaccaatcgaggaaccaactgaaacacccgaggaaattgctgaggaagaaaatgcagaggagactgttgaaacagccgttgcacccaaggtcaaggcacggaaagagaacaccatcaggcacagagcaacacgtgcaagaggctccgagcttcccaaagttattctaaagcgcaagaaagcaacaaactactggctatgggcagctgctcctgctgcactcgcgattctggtacttctagtcatcggatacatgtatcttcaaaagtagaaagaggcaggtggggagagccaaaacaaaaaacaaaaactttgtttttagtgttttaattttttgtttacaaatactgcaatagcaagtactgtttagtttgatcataacaatatttctttttcttgcatcctatatagtttaggatggaaaactcataaatgttttgctggtagatgtgcggcctatcttgagattacttactggaaaaaaaaaaaaaaaaaaaaaaaaactcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="31294" stop="34760"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31594" g_stop="32109" g_length="516"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="516" r_length="516" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32110" i_stop="34438" i_length="2329">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34439" g_stop="34460" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="517" r_stop="538" r_length="22" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E286386" ref_strand="-">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>538</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E286386" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="31594" e_stop="32109"/>
          <exon e_start="34439" e_stop="34460"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGCAGGTGGGGAGAGACAAAACAAAAAACAAAAACTTTGTTTTTAGTGTTTTAATTTTTTGTTTACAAATACTGCAATAGCAAGTACTGTTTAGTTTGATCATAACAATATTTCTTTTTCTTGCATCCTATATAGTTTAGGATGGAAAACTCATAAATGTTTTGCTGGTAGATGTGCGGCCTATCTTGAGATTACTTACTGGAGAGACAGTCTACATGTTTTTCTTTTGTTGCTGTAGTTGATATTATATTGACATTTTGCTTAATCGTCGACTTAGCATTTGATCGTAGATTTAGTTGAAACTTTTTAAAAAAAGAATGGTTGGACATGCCATTTGATATTTCGGGAGTGGAAGTGAAATTTCACCGAAAAATCGGTATGGATTATATTTTTGAAAGCCTACTTTCAAAATCTATGATCAAACGGGAGTTCGATTATAAAATGGTGACATGAGGGATTATTAAGTTCTACAAAATTTGTATAACGCTGTAATAATATACCAAGAAAGCTTTGATTTTGCTGATATTATTAAAATATTTACTTCTTTTTATCACCAATTTGTTACTTCTCTCTATAAAATCTAATTGTTAAAATTTGACAAAAAAGAAAGAAACATTTTTTACTGTTTCGAAATGAATTTAAAGAAAGACATAATATAATATAATTTTTTTGTTAAAAAATATTGGGTAATATTTATAATAATTCTATTATTATGAAAAATGGAGCACTCAAATTTGGATTCTAAGACGATACTTCATTTATAAAGACATTGAGTCGCACATAATCAGATATTTTAGGAGGACTTGAAATGAAATCTATGGAACTAAATATGGAAATTAACAATTCTTGTGTTTTTATAGCATTTTTTTTGGTAATGTATCCTATTATGCTTGTGGAATTATTTCGATCAGTGTTTTAAAAGATTTTTCTGGGACTTACTTCGGGCTTGCACTAGGGCGGGACTCTAGCAAAACGCGTCAAGGCTCAAGTGCGAGATTTAGTTAAGACTTACACCCTAAGCATCCGACTGTATGCCCTAAGCACGCTCAACGCTCGGGACTCGCCTAACTGATCTTACACAAATTATGTGTTAAAATAGTTAATTAACATTGTTGACCCTCATAGTTCTTGAATAAATGAATGATACATAACTTTTTAATCTATAAAGATAACAAGATTAAGAGTAACTCAAACAACAAATATAGTATCACATATTTACTATTTGGTAACACAACGAAGGTAATTATATATTACATAACATTTCTCTACTTTAATGATTCTTTTATTATTAGAAAGTGAAGATATTAAATTATTTTTACTTGTATAGTCATGTTTTATTATTATTGGTGTAATGATATTTTTCAAATAGTAATTAGTAATACGTTTTTTCTTTATTATAGAATATCAATACTTATCTCAAATAAAAATCATAATATAATTTCTATATATTATAGATTTTTCATGAAAAATTATTTGTAAAATCATTGAGAGGAATTTAATTAGTAATAAAACTATAAAATTGAATATATATGAGTGATGAGACTACGCCCCGTAGATCCATAGGACTTACACCCCATATTTCAATACTGTATAAAACGCCTCACCTCGCCTCGCCTCGTACCCCTGTCTTTTCAACCACTGATTTCAATTATACGTCTAACTGTGAATCTTAATATATGAATAAAATTGATCTTCTATTTCAAGAAATAAAAAAAGTTGTGATGAGTTATATCAATTTTAACCAACCAAAGTAAAAACTAAATAGAGAAAAATTAATTTGTTACGTAAAATTAGAATGGCTGCTGGTACTTTAATTGTATTTCCATCAAATAGATACAAATAAGTAGTATATATTATGACGTGGTTGTGATGTTGACATTCAATGATGCTGATGGTTTTAGAGCTCGAACTTGTAATCGATAAGTCACTTGGAGATTATTTTATCGTTGTTTTTAGCCAATTATTTAAATGATTCAACAATAATAATAACAATATTCGATAAAATCTAAAGAATGTAGAATGTACGCAAGCCTTATGATTATACCTCATTGAGATAGAGATGCTGTTTCTTAAAGACCCTTAACTCATATGCAACAAATTTCGGTATAAAATAAAAGGAGACAATGAAGAAAATATATGAGACAACGGGAACAATGCAAAAGTAACCAAAACATAAAAAAAATCATATGTTAATCGAAATACAATAGTCCATAAACAACATATTAGGATAGATCATAACTAAAAATAATTATAAACAATGATTAACCAAAAACAAGAACTACAATAGTACTTAGATGGTAGACTTTTTTTCAAATAATAAGAGTGTTCGAACCAACTTGAAACCTTGTAATTTTGCGTATGTTTATCACTGTTTCACTTATTTCATTAACGATTAGATCACACCCTCGTACAAAAATACCAGGAACAACATCACATACATTTTTATTAATGACAACATAGTCACAAGTATTTCTTCTTTGTATCAAATGGAGCTTGTTGAATCTTAGGTACAAAAATTAGTCCTCCTCCACTATGCAAAAAAAAAAAAAAAAAAAACTTG</genome_strand>
        <mrna_strand>AGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGTTATTCTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGCAGGTGGGGAGAGCCAAAACAAAAAACAAAAACTTTGTTTTTAGTGTTTTAATTTTTTGTTTACAAATACTGCAATAGCAAGTACTGTTTAGTTTGATCATAACAATATTTCTTTTTCTTGCATCCTATATAGTTTAGGATGGAAAACTCATAAATGTTTTGCTGGTAGATGTGCGGCCTATCTTGAGATTACTTACTGGAAAAAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAACTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E418897" ref_strand="-" ref_description="SGN-E418897 [STM-28-F19]">
      <seq>gaggaaattgctgaggaagaaaatgcagaggagactgttgaaacagccgttgcacccaaggtcaaggcacggaaagataacaccatcaggcacagagcaacacgcgcaagagggtctgagcttcccaaatctatactaaagcgcaagaaagcaacaaactactggctatgggcagctgctcctgctgcactcgcgattctggtacttctagtcatcggatacatgtatcttcaaaagtagaaagaggcgggggaaactggagagtgaaaacaaaacaaaacaaaaaacaaaaactttggttttagtgtttttttttacaatactgcaatagcaagtactgtttagtttgatcataacaatatttcttttttcttgcatcctatatagtttaggatggaaaactcataaatgtgttgctggtagatgtgcggcctatcttgagattacttactgagagacagtctacatgtttttattttttttgctgtagttgcaattatattgacattttgcttaatcacttgtcatgttagacttttttccttagtaaaaaaaaaaaaaaagaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="31356" stop="90079"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31656" g_stop="32167" g_length="512"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="519" r_length="519" r_score="0.904"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32168" i_stop="33801" i_length="1634">
            <donor d_prob="0.000" d_score="0.88"/>
            <acceptor a_prob="0.820" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="33802" g_stop="33812" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="520" r_stop="528" r_length="9" r_score="0.545"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="33813" i_stop="34407" i_length="595">
            <donor d_prob="0.769" d_score="0.00"/>
            <acceptor a_prob="0.879" a_score="0.61"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34408" g_stop="34453" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="529" r_stop="573" r_length="45" r_score="0.609"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E418897" ref_strand="-">
        <total_alignment_score>0.904</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E418897" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="31656" e_stop="32167"/>
          <exon e_start="33802" e_stop="33812"/>
          <exon e_start="34408" e_stop="34453"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGCAGGTG----GGGAGAGACAAAAC--AA-AAAACAAAAACTTTGTTTTTAGTGTTTTAAT-TTTTTGTTTACAAATACTGCAATAGCAAGTACTGTTTAGTTTGATCATAACAATATTTC-TTTTTCTTGCATCCTATATAGTTTAGGATGGAAAACTCATAAATGTTTTGCTGGTAGATGTGCGGCCTATCTTGAGATTACTTACTGGAGAGACAGTCTACATGTTTTT-CTTTTGTTGCTGTAGTTGATATTATATTGACATTTTGCTTAATCGTCGACTTAGCATTTGATCGTAGATTTAGTTGAAACTTTTTAAAAAAAGAATGGTTGGACATGCCATTTGATATTTCGGGAGTGGAAGTGAAATTTCACCGAAAAATCGGTATGGATTATATTTTTGAAAGCCTACTTTCAAAATCTATGATCAAACGGGAGTTCGATTATAAAATGGTGACATGAGGGATTATTAAGTTCTACAAAATTTGTATAACGCTGTAATAATATACCAAGAAAGCTTTGATTTTGCTGATATTATTAAAATATTTACTTCTTTTTATCACCAATTTGTTACTTCTCTCTATAAAATCTAATTGTTAAAATTTGACAAAAAAGAAAGAAACATTTTTTACTGTTTCGAAATGAATTTAAAGAAAGACATAATATAATATAATTTTTTTGTTAAAAAATATTGGGTAATATTTATAATAATTCTATTATTATGAAAAATGGAGCACTCAAATTTGGATTCTAAGACGATACTTCATTTATAAAGACATTGAGTCGCACATAATCAGATATTTTAGGAGGACTTGAAATGAAATCTATGGAACTAAATATGGAAATTAACAATTCTTGTGTTTTTATAGCATTTTTTTTGGTAATGTATCCTATTATGCTTGTGGAATTATTTCGATCAGTGTTTTAAAAGATTTTTCTGGGACTTACTTCGGGCTTGCACTAGGGCGGGACTCTAGCAAAACGCGTCAAGGCTCAAGTGCGAGATTTAGTTAAGACTTACACCCTAAGCATCCGACTGTATGCCCTAAGCACGCTCAACGCTCGGGACTCGCCTAACTGATCTTACACAAATTATGTGTTAAAATAGTTAATTAACATTGTTGACCCTCATAGTTCTTGAATAAATGAATGATACATAACTTTTTAATCTATAAAGATAACAAGATTAAGAGTAACTCAAACAACAAATATAGTATCACATATTTACTATTTGGTAACACAACGAAGGTAATTATATATTACATAACATTTCTCTACTTTAATGATTCTTTTATTATTAGAAAGTGAAGATATTAAATTATTTTTACTTGTATAGTCATGTTTTATTATTATTGGTGTAATGATATTTTTCAAATAGTAATTAGTAATACGTTTTTTCTTTATTATAGAATATCAATACTTATCTCAAATAAAAATCATAATATAATTTCTATATATTATAGATTTTTCATGAAAAATTATTTGTAAAATCATTGAGAGGAATTTAATTAGTAATAAAACTATAAAATTGAATATATATGAGTGATGAGACTACGCCCCGTAGATCCATAGGACTTACACCCCATATTTCAATACTGTATAAAACGCCTCACCTCGCCTCGCCTCGTACCCCTGTCTTTTCAACCACTGATTTCAATTATACGTCTAACTGTGAATCTTAATATATGAATAAAATTGATCTTCTATTTCAAGAAATAAAAAAAGTTGTGATGAGTTATATCAATTTTAACCAACCAAAGTAAAAACTAAATAGAGAAAAATTAATTTGTTACGTAAAATTAGAATGGCTGCTGGTACTTTAATTGTATTTCCATCAAATAGATACAAATAAGTAGTATATATTATGACGTGGTTGTGATGTTGACATTCAATGATGCTGATGGTTTTAGAGCTCGAACTTGTAATCGATAAGTCACTTGGAGATTATTTTATCGTTGTTTTTAGCCAATTATTTAAATGATTCAACAATAATAATAACAATATTCGATAAAATCTAAAGAATGTAGAATGTACGCAAGCCTTATGATTATACCTCATTGAGATAGAGATGCTGTTTCTTAAAGACCCTTAACTCATATGCAACAAATTTCGGTATAAAATAAAAGGAGACAATGAAGAAAATATATGAGACAACGGGAACAATGCAAAAGTAACCAAAACATAAAAAAAATCATATGTTAATCGAAATACAATAGTCCATAAACAACATATTAGGATAGATCATAACTAAAAATAATTATAAACAATGATTAACCAAAAACAAGAACTACAATAGTACTTAGATGGTAGACTTTTTTTCAAATAATAAGAGTGTTCGAACCAACTTGAAACCTTGTAATTTTGCGTATGTTTATCACTGTTTCACTTATTTCATTAACGATTAGATCACACCCTCGTACAAAAATACCAGGAACAACATCACATACATTTTTATTAATGACAACATAGTCACAAGTATTTCTTCTTTGTATCAAATGGAGCTTGTTGAATCTTAGGTACAAAAATTAGTCCTCCTCCACTATGCAAAAAAAAAAAAAAAAA</genome_strand>
        <mrna_strand>GAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGATAACACCATCAGGCACAGAGCAACACGCGCAAGAGGGTCTGAGCTTCCCAAATCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGCGGGGGAAACTGGAGAGTGAAAACAAAACAAAACAAAAAACAAAAACTTTG-GTTTTAGTGTTTTTTTTTAC-AATACTGCAATAGCAAGTACTGTTTAGTTTGATCATAACAATATTTCTTTTTTCTTGCATCCTATATAGTTTAGGATGGAAAACTCATAAATGTGTTGCTGGTAGATGTGCGGCCTATCTTGAGATTACTTACT-GAGAGACAGTCTACATGTTTTTATTTTTTTTGCTGTAGTTGCAATTATATTGACATTTTGCTTAATC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-CTTG-TCAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-TAGACTTTTTTCCTTAGTAAAAAAAAAAAAAAAGAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E237287" ref_strand="-" ref_description="SGN-E237287 [cLEL-7-H2](-)">
      <seq>tttttttttttttttttttgatcaaactaaacagtacttgctattgcagtatttgtaaacaaaaaattaaaacactaaaaacaaagtttttgttttttgttttgtctctccccacctgcctctttctacttttgaagatacatgtatccgatgactagaagtaccagaatcgcgagtgcatcaggagcagctgcccatagccagtagtttgttgctttcttgcgctttagtatagctttgggaagctcggagcctcttgcacgtgttgctctgtgcctgatgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="34755" stop="31438"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32273" g_stop="32267" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="7" r_length="7" r_score="0.714"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32266" i_stop="32014" i_length="253">
            <donor d_prob="0.193" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32013" g_stop="31738" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="8" r_stop="283" r_length="276" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E237287" ref_strand="-">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>283</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E237287" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="32273" e_stop="32267"/>
          <exon e_start="32013" e_stop="31738"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTCGGTGAAATTTCACTTCCACTCCCGAAATATCAAATGGCATGTCCAACCATTCTTTTTTTAAAAAGTTTCAACTAAATCTACGATCAAATGCTAAGTCGACGATTAAGCAAAATGTCAATATAATATCAACTACAGCAACAAAAGAAAAACATGTAGACTGTCTCTCCAGTAAGTAATCTCAAGATAGGCCGCACATCTACCAGCAAAACATTTATGAGTTTTCCATCCTAAACTATATAGGATGCAAGAAAAAGAAATATTGTTATGATCAAACTAAACAGTACTTGCTATTGCAGTATTTGTAAACAAAAAATTAAAACACTAAAAACAAAGTTTTTGTTTTTTGTTTTGTCTCTCCCCACCTGCCTCTTTCTACTTTTGAAGATACATGTATCCGATGACTAGAAGTACCAGAATCGCGAGTGCAGCAGGAGCAGCTGCCCATAGCCAGTAGTTTGTTGCTTTCTTGCGCTTTAGTATAGCTTTGGGAAGCTCGGAGCCTCTTGCACGTGTTGCTCTGTGCCTGATGG</genome_strand>
        <mrna_strand>TTTTTTT.............................................................................................................................................................................................................................................................TTTTTTTTTTTTGATCAAACTAAACAGTACTTGCTATTGCAGTATTTGTAAACAAAAAATTAAAACACTAAAAACAAAGTTTTTGTTTTTTGTTTTGTCTCTCCCCACCTGCCTCTTTCTACTTTTGAAGATACATGTATCCGATGACTAGAAGTACCAGAATCGCGAGTGCATCAGGAGCAGCTGCCCATAGCCAGTAGTTTGTTGCTTTCTTGCGCTTTAGTATAGCTTTGGGAAGCTCGGAGCCTCTTGCACGTGTTGCTCTGTGCCTGATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E219927" ref_strand="+" ref_description="SGN-E219927 [cLEL-24-E1](-)">
      <seq>ggtgggggatgtactagagtgattgatgatcctaagaaatgtggcaaatgtaataaagtttgtaaggatggggtcaaatgtgaaaatggatattgtggggatgcttagttataaggtgaaattataacgggttgagcagtatatcaactattatacattcagtggaatttctcgagtgggatctgaaattagttgagtgactccatatcgtaagtacaaaaggcccagggtcttttttttttttttttgcatagtggaggaggactaatttttgttcctaagattcaacaagctccctttgatacaaagaagaaatacttgtggctatgttgtcattaataaaaatgtatgtgatgttgttcccggtaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="34982" stop="34017"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34682" g_stop="34318" g_length="365"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="367" r_length="367" r_score="0.923"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="368" polyA_stop="384"/>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E219927" ref_strand="+">
        <total_alignment_score>0.923</total_alignment_score>
        <cumulative_length_of_scored_exons>365</cumulative_length_of_scored_exons>
        <coverage percentage="0.951" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E219927" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34682" e_stop="34318"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTGGGGTATGTACTAGAGTGATTGATGATCCTAAGAATTGTGGCAAATGTAATAGAGTTTGTAAGGATGGGGTGAAATGTGAAAATGGATATTGTGGGTATGCTTAGTTATAAGGTGAAATTATAACGGGTTGAGCTG-ATA-CGATTATAATACATTCAGTGTAATTTCACGAGTGGGATCTGAAATTAGTTGAGTGACTCCATATCGTAAGTACTATATATCAAGTTTTTTTTTTTTTTTTTTTTGCATAGTGGAGGAGGACTAATTTTTGTACCTAAGATTCAACAAGCTCCATTTGATACAAAGAAGAAATACTTGTGACTATGTTGTCATTAATAAAAATGTATGTGATGTTGTTCCTGGT</genome_strand>
        <mrna_strand>GGTGGGGGATGTACTAGAGTGATTGATGATCCTAAGAAATGTGGCAAATGTAATAAAGTTTGTAAGGATGGGGTCAAATGTGAAAATGGATATTGTGGGGATGCTTAGTTATAAGGTGAAATTATAACGGGTTGAGCAGTATATCAACTATTATACATTCAGTGGAATTTCTCGAGTGGGATCTGAAATTAGTTGAGTGACTCCATATCGTAAGTACAAAAGGCCCAGGGTCTTTTTTTTTTTTTTTTGCATAGTGGAGGAGGACTAATTTTTGTTCCTAAGATTCAACAAGCTCCCTTTGATACAAAGAAGAAATACTTGTGGCTATGTTGTCATTAATAAAAATGTATGTGATGTTGTTCCCGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E219783" ref_strand="+" ref_description="SGN-E219783 [cLEL-24-E1](-)">
      <seq>taagaattgtggcaaatgtaatagagtttgtaaggatggggtgaaatgtgaaaatggatattgtgggtatgcttagttataaggtgaaattataacgggttgagctgatacgattataatacattcagtgtaatttcacgagtgggatctgaaattagttaagtgactccatatcgtaagtactatatatcaagttttttttttttttttttttgcatagtggaggaggcctaatttttgtacctaagattcaacaagctccatttgatacaaagaagaaatacttgtgactatgttgtcattaataaaaatgtatgtgatgttgttcctggtaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="34950" stop="34017"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34650" g_stop="34318" g_length="333"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="333" r_length="333" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="334" polyA_stop="350"/>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E219783" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>333</cumulative_length_of_scored_exons>
        <coverage percentage="0.951" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E219783" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34650" e_stop="34318"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAGAATTGTGGCAAATGTAATAGAGTTTGTAAGGATGGGGTGAAATGTGAAAATGGATATTGTGGGTATGCTTAGTTATAAGGTGAAATTATAACGGGTTGAGCTGATACGATTATAATACATTCAGTGTAATTTCACGAGTGGGATCTGAAATTAGTTGAGTGACTCCATATCGTAAGTACTATATATCAAGTTTTTTTTTTTTTTTTTTTTGCATAGTGGAGGAGGACTAATTTTTGTACCTAAGATTCAACAAGCTCCATTTGATACAAAGAAGAAATACTTGTGACTATGTTGTCATTAATAAAAATGTATGTGATGTTGTTCCTGGT</genome_strand>
        <mrna_strand>TAAGAATTGTGGCAAATGTAATAGAGTTTGTAAGGATGGGGTGAAATGTGAAAATGGATATTGTGGGTATGCTTAGTTATAAGGTGAAATTATAACGGGTTGAGCTGATACGATTATAATACATTCAGTGTAATTTCACGAGTGGGATCTGAAATTAGTTAAGTGACTCCATATCGTAAGTACTATATATCAAGTTTTTTTTTTTTTTTTTTTTGCATAGTGGAGGAGGCCTAATTTTTGTACCTAAGATTCAACAAGCTCCATTTGATACAAAGAAGAAATACTTGTGACTATGTTGTCATTAATAAAAATGTATGTGATGTTGTTCCTGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E484374" ref_strand="+" ref_description="SGN-E484374 [cSTE-13-I11]">
      <seq>gagagaactaaatctcttattttcctccattgctacgctccaatctccatcaacaatggctaccaccaatagcttcctcaatacaccaaccaaaactccaactagtacttccatttccaaaaaacatcaccacaagcagcatgccgcggatccaaacagatcgggttcagaattcaaggaccgatttgaggcctacaatcggcttcaagcagccgctgtagctttcggagagaaacttccgattcctgaaatagttgctattggtggacagtccgatgggaaaagctccctcctcgaagccctattgggattccgattcaatgtccgagaagttgaaatgggtacccgacgccctctcatcttgcaaatggtccatgaccaatccgctttagagcctcgttgccgctttcaggaagaggattcagaagaatatggaagtccagttgtcttggcctctgcgattgcagataccataaagtctcggactgagtcacttttgaaaaggactagagcggcagtctcttcaaagcctattgtcatgagagcagaatatgctcattgccctaatcttaccatcattgataca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="40156" stop="41785"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40455" g_stop="40823" g_length="369"/>
          <reference_exon_boundary r_type="cDNA" r_start="44" r_stop="412" r_length="369" r_score="0.957"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40824" i_stop="41311" i_length="488">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41312" g_stop="41485" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="413" r_stop="586" r_length="174" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E484374" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>543</cumulative_length_of_scored_exons>
        <coverage percentage="0.927" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E484374" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40455" e_stop="40823"/>
          <exon e_start="41312" e_stop="41485"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTCCATCAACAATGGCTTCCACCAATAGCTTCCTCAATACACCAACCAAAACTCCAACTAGTACTTCCATTTCCAAAAAGCACCACCACAAGCATCATACGGCGGATTCAAACAGATCGGCTTCTGAATTCAAGGACCGATTTGAGGCTTACAATCGTCTTCAAGCAGCCGCTGTAGCTTTCGGTGAGAAACTTCCGATTCCTGAAATAGTTGCTATTGGTGGACAGTCCGATGGGAAAAGCTCCCTCCTTGAAGCCCTATTGGGATTCCGGTTCAATGTCCGAGAAGTTGAAATGGGTACCCGACGCCCTCTCATCTTGCAAATGGTCCATGACCAATCCGCTTTAGATCCTCGTTGCCGCTTTCAGGTTTACTTTACACACACTCTTTCTCCTTATCTTTGTTTATATAAGTTGAATGCAAAATGTGTTACTACTCAAATAATCTAAAATGTTACTTGGAAGTTATCAAAGCAAACCAGTAAAGACCTTAAATACGTAGACAGAATGATAAGTGTACCATGTATTGACATTAGAGCAAAATGGATATAGAGAATTCACATAGCTGACCGCAATTAACTATGCCTCGATTTCAAACTAGTCGGGATTGGTTATACAAAACCTACATATGTTCAGAAAATTATCATAAGAAAGTCTGTTATTAATGTTGGTTGTCAACCTATTATAACACCCTCTTTGTTCGAGCTTTATGATAAATGGTATATAGATATCAGACCTTGGATTTAGAAATTGAGTAGGAGTGTGATGTTGGAGATTATCTTGAGAGAGTTAATTGTTGTGTGCTGAATTTCGAGAAGAGGAAATGCTGGTAATATGGAATATGATTTTTGATGCAGGATGAGGATTCAGAAGAATATGGAAGTCCACTTGTCTTGGCCTCTGAGATTGCAGATACCATAAAGTCTCGGACTGAGTCACTTTTGAAAAGGACTAGAGCGGCAGTCTCTTCAAAGCCTATTGTCATGAGAGCAGAATATGCTCATTGCCCAAATCTTACCATCATTGATACA</genome_strand>
        <mrna_strand>TCTCCATCAACAATGGCTACCACCAATAGCTTCCTCAATACACCAACCAAAACTCCAACTAGTACTTCCATTTCCAAAAAACATCACCACAAGCAGCATGCCGCGGATCCAAACAGATCGGGTTCAGAATTCAAGGACCGATTTGAGGCCTACAATCGGCTTCAAGCAGCCGCTGTAGCTTTCGGAGAGAAACTTCCGATTCCTGAAATAGTTGCTATTGGTGGACAGTCCGATGGGAAAAGCTCCCTCCTCGAAGCCCTATTGGGATTCCGATTCAATGTCCGAGAAGTTGAAATGGGTACCCGACGCCCTCTCATCTTGCAAATGGTCCATGACCAATCCGCTTTAGAGCCTCGTTGCCGCTTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAGGATTCAGAAGAATATGGAAGTCCAGTTGTCTTGGCCTCTGCGATTGCAGATACCATAAAGTCTCGGACTGAGTCACTTTTGAAAAGGACTAGAGCGGCAGTCTCTTCAAAGCCTATTGTCATGAGAGCAGAATATGCTCATTGCCCTAATCTTACCATCATTGATACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E399977" ref_strand="+" ref_description="SGN-E399977 [cSTC-3-J14]">
      <seq>aaattacttgtaatgcttctattctttcttccccattagccttgtttttcactccaaacaaactttgctttcttctcttctttcatcttcttcttgttgttgattttcatttgagatagtaacaatggaaatcacttcaagaattcaagatagagagaacccatcttccattaactcaccaagaagcaatggaacaagtcctacaagcaacagcaatggatcagttatccaaaatccaaccccaccactgaccccaaaaacaatttctagatctgaaacaactaacccatacccaacaacttttgttcaagctgatacttcttccttcaaacaagttgttcaaatgctaactggatcatctgaaactgctaaacaagcatctggctcagatccatcttcctcttcaaattcaaattcagccaaaagttcaattcccccaattcgaaatgcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="52084" stop="53120"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52360" g_stop="52820" g_length="461"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="452" r_length="452" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E399977" ref_strand="+">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>461</cumulative_length_of_scored_exons>
        <coverage percentage="1.020" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E399977" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52360" e_stop="52820"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATTACTTGTAAT-CTT-TCTTC-ACCTTCCCCATTAGCCTTGTTTTTCACTCCAAAACAAACTTTGCTTTTTTTTTTTTTATTCTTCTTTCTTCTTCATCTTGTTGTTGATTTGAGATAGTAACAATGGAAATCAATTCAAGAATTCAAGATAGAGAGAACCCATCTTCCATAAACTCACCAAGAAGCAATGGAACAAGTCCTACAAGCAACAGCAATGGATCAGTTATCCAAAATCCAACCCCACCACTGACCCCAAAAACAATTTCTAGATCTGAAACAACTAACCCATACCCAACAACTTTTGTTCAAGCTGATACATCTTCTTTCAAACAAGTGGTTCAAATGCTAACTGGATCATCTGAAACTTCTGCGAAACAATCATCTGCTTCAGATCCATCTTCTTCTTCAAATTCAAATTCAAATTCAGCAAAAAGTTCAATTCCCCCAATTCGAACAGCAC</genome_strand>
        <mrna_strand>AAATTACTTGTAATGCTTCTATTCTTTCTTCCCCATTAGCCTTGTTTTTCACTCC-AAACAAACTTTGCTTTCTTCTCTTCT-TTCATC-TTCTTCTTGTTGTTGATTTTCATTTGAGATAGTAACAATGGAAATCACTTCAAGAATTCAAGATAGAGAGAACCCATCTTCCATTAACTCACCAAGAAGCAATGGAACAAGTCCTACAAGCAACAGCAATGGATCAGTTATCCAAAATCCAACCCCACCACTGACCCCAAAAACAATTTCTAGATCTGAAACAACTAACCCATACCCAACAACTTTTGTTCAAGCTGATACTTCTTCCTTCAAACAAGTTGTTCAAATGCTAACTGGATCATCTGAAA---CTGCTAAACAAGCATCTGGCTCAGATCCATCTTC--C-TC---TTCAAATTCAAATTCAGCCAAAAGTTCAATTCCCCCAATTCGAAATGCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E608906" ref_strand="+" ref_description="SGN-E608906 [24903]">
      <seq>tgttgattttcatttgagatagtaacaatggaaagtctttcaagaattcaagatagagagaacccatcttccattaactcaccaagaagcaatggaacaagtcctacaagcaacagcaatggatcagttatccaaaatccaaccccaccactgaccccaaaaacaatttctagatctgaaacaactaacccatacccaacaacttttgttcaagctgatacttcttccttcaaacaagttgttcaaatgctaactggatcatctgaaactgctaaacaagcatcaggctcagatccgtcttcctcttcaaattcaaattcagccaaaagttcaattcccccaattcgaaacgcaccgaagaaaccagggttcaagctctacgaaaggagaaacagtttgaaaaatgggtttatgattagccctttgattcctggaattcatgctcagaattcgagtttttctcctcggaacaaactggagattctctcgccgagtattctagatttcccttcacttgctttaagccctgttacgccattgaatgaagacccatttaataaatcttcgccattaacgaatctgtctgaagaagataaagctattgctgagaagaagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="52157" stop="53382"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52457" g_stop="53082" g_length="626"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="617" r_length="617" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E608906" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>626</cumulative_length_of_scored_exons>
        <coverage percentage="1.015" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E608906" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52457" e_stop="53082"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTGTTGTTGATTTGAGATAGTAACAATGGAAATCAATTCAAGAATTCAAGATAGAGAGAACCCATCTTCCATAAACTCACCAAGAAGCAATGGAACAAGTCCTACAAGCAACAGCAATGGATCAGTTATCCAAAATCCAACCCCACCACTGACCCCAAAAACAATTTCTAGATCTGAAACAACTAACCCATACCCAACAACTTTTGTTCAAGCTGATACATCTTCTTTCAAACAAGTGGTTCAAATGCTAACTGGATCATCTGAAACTTCTGCGAAACAATCATCTGCTTCAGATCCATCTTCTTCTTCAAATTCAAATTCAAATTCAGCAAAAAGTTCAATTCCCCCAATTCGAACAGCACCGAAGAAACCTGGGTTCAAGCTTTACGAGAGGAGAAACAGTTTGAAAAATGGGTTTATGATTAGCCCTTTGATTCCTGGAATTCATCCTCAGAATTCGAGTTTTTCTCCTCGGAACAAACCGGAGATTCTCTCACCCAGTATTCTAGATTTTCCTTCACTTGCTTTAAGCCCTGTTACGCCATTGAATGAAGACCCATTTAATAAATCATCACCATTAACGAATCTATCTGAAGAAGATAAAGCTATTGCTGAGAAGAAGTT</genome_strand>
        <mrna_strand>TGTTGATTTTCATTTGAGATAGTAACAATGGAAAGTCTTTCAAGAATTCAAGATAGAGAGAACCCATCTTCCATTAACTCACCAAGAAGCAATGGAACAAGTCCTACAAGCAACAGCAATGGATCAGTTATCCAAAATCCAACCCCACCACTGACCCCAAAAACAATTTCTAGATCTGAAACAACTAACCCATACCCAACAACTTTTGTTCAAGCTGATACTTCTTCCTTCAAACAAGTTGTTCAAATGCTAACTGGATCATCTGAAA---CTGCTAAACAAGCATCAGGCTCAGATCCGTCTTC--C-TC---TTCAAATTCAAATTCAGCCAAAAGTTCAATTCCCCCAATTCGAAACGCACCGAAGAAACCAGGGTTCAAGCTCTACGAAAGGAGAAACAGTTTGAAAAATGGGTTTATGATTAGCCCTTTGATTCCTGGAATTCATGCTCAGAATTCGAGTTTTTCTCCTCGGAACAAACTGGAGATTCTCTCGCCGAGTATTCTAGATTTCCCTTCACTTGCTTTAAGCCCTGTTACGCCATTGAATGAAGACCCATTTAATAAATCTTCGCCATTAACGAATCTGTCTGAAGAAGATAAAGCTATTGCTGAGAAGAAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E619453" ref_strand="+" ref_description="SGN-E619453 [70142]">
      <seq>gttgattttcatttgagatagtaacaatggaaatcacttcaagaattcaagatagagagaacccatcttccattaactcaccaagaagcaatggaacaagtcctacaagcaacagcaatggatcagttatccaaaatccaaccccaccactgaccccaaaaacaatttctagatctgaaacaactaacccatacccaacaacttttgttcaagctgatacttcttccttcaaacaagttgttcaaatgctaactggatcatctgaaactgctaaacaagcatcaggctcagatccgtcttcctcttcaaattcaaattcagccaaaagttcaattcccccaattcgaaacgcaccgaagaaaccagggttcaagctctacgaaaggagaaacagtttgaaaaatgggtttatgattagccctttgattcctggaattcatgctcagaattcgagtttttctcctcggaacaaactggagattctctcgccgagtattctagatttcccttcacttgctttaagccctgttacgccattgaatgaagacccatttaataaatcttcgccattaacgaatctgtctgaagaagataaagctattgctgagaagaagttttatttgcatccttcaccgagaagaacaccgagagattctcaaccacagcttttgcctctgtttccggtgagttctccgagagtttcagggtcttcttcttgaagtgaattttctgtgatttgtgctgctgtgagaaggagaatttcagcttaatttgaagagcaaacaaggtagagatctttgcttcacttgtataatttgatctcctttttcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="52159" stop="53598"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52458" g_stop="53232" g_length="775"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="759" r_length="759" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E619453" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>775</cumulative_length_of_scored_exons>
        <coverage percentage="0.931" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E619453" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52458" e_stop="53232"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGTTGTTGATTTGAGATAGTAACAATGGAAATCAATTCAAGAATTCAAGATAGAGAGAACCCATCTTCCATAAACTCACCAAGAAGCAATGGAACAAGTCCTACAAGCAACAGCAATGGATCAGTTATCCAAAATCCAACCCCACCACTGACCCCAAAAACAATTTCTAGATCTGAAACAACTAACCCATACCCAACAACTTTTGTTCAAGCTGATACATCTTCTTTCAAACAAGTGGTTCAAATGCTAACTGGATCATCTGAAACTTCTGCGAAACAATCATCTGCTTCAGATCCATCTTCTTCTTCAAATTCAAATTCAAATTCAGCAAAAAGTTCAATTCCCCCAATTCGAACAGCACCGAAGAAACCTGGGTTCAAGCTTTACGAGAGGAGAAACAGTTTGAAAAATGGGTTTATGATTAGCCCTTTGATTCCTGGAATTCATCCTCAGAATTCGAGTTTTTCTCCTCGGAACAAACCGGAGATTCTCTCACCCAGTATTCTAGATTTTCCTTCACTTGCTTTAAGCCCTGTTACGCCATTGAATGAAGACCCATTTAATAAATCATCACCATTAACGAATCTATCTGAAGAAGATAAAGCTATTGCTGAGAAGAAGTTTTATTTGCATCCTTCACCAAGAAGAACACCGAGAGACTCTGAACCACAGCTTTTGCCTCTGTTTCCGGTGAGTTCTCCTAGAGTTTCAGGGTCTTCTTCTTGAAAGTGAAAATTTTCAGTGATTTGGTGCTGCTGCTGTGAGAAGGAGAA</genome_strand>
        <mrna_strand>GTTGATTTTCATTTGAGATAGTAACAATGGAAATCACTTCAAGAATTCAAGATAGAGAGAACCCATCTTCCATTAACTCACCAAGAAGCAATGGAACAAGTCCTACAAGCAACAGCAATGGATCAGTTATCCAAAATCCAACCCCACCACTGACCCCAAAAACAATTTCTAGATCTGAAACAACTAACCCATACCCAACAACTTTTGTTCAAGCTGATACTTCTTCCTTCAAACAAGTTGTTCAAATGCTAACTGGATCATCTGAAA---CTGCTAAACAAGCATCAGGCTCAGATCCGTCTTC--C-TC---TTCAAATTCAAATTCAGCCAAAAGTTCAATTCCCCCAATTCGAAACGCACCGAAGAAACCAGGGTTCAAGCTCTACGAAAGGAGAAACAGTTTGAAAAATGGGTTTATGATTAGCCCTTTGATTCCTGGAATTCATGCTCAGAATTCGAGTTTTTCTCCTCGGAACAAACTGGAGATTCTCTCGCCGAGTATTCTAGATTTCCCTTCACTTGCTTTAAGCCCTGTTACGCCATTGAATGAAGACCCATTTAATAAATCTTCGCCATTAACGAATCTGTCTGAAGAAGATAAAGCTATTGCTGAGAAGAAGTTTTATTTGCATCCTTCACCGAGAAGAACACCGAGAGATTCTCAACCACAGCTTTTGCCTCTGTTTCCGGTGAGTTCTCCGAGAGTTTCAGGGTCTTCTTCTTG-AAGTG--AATTTTCTGTGA-TT--TG-TGCTGCTGTGAGAAGGAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E688764" ref_strand="+" ref_description="SGN-E688764 [t3_tus_54_L20]">
      <seq>tcttctttcaacaagtggttcaaatgctaactggatcatctgaaacttctgcgaaacaatcatctgcttcagatccatcttcttcttcaaattcaaattcaaattcagcaaaaagttcaattcccccaattcgaacagcaccgaagaaacctgggttcaagctttacgagaggagaaacagtttgaaaaatgggtttatgattagccctttgattcctggaattcatcctcagaattcgagtttttctcctcggaacaaaccggagattctctcacccagtattctagattttccttcacttgctttaagccctgttacgccattgaatgaagacccatttaataaatcatcaccattaacgaatctatctgaagaagataaagctattgctgagaagaagttttatttgcatccttcaccaagaagaacaccgagagactctgaaccacagcttttgcctctgtttccggtgagttctcctagagtttcagggtcttcttcttngaagtgaaaattttcagtgatttgtgctgctgctgtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="52379" stop="53523"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52679" g_stop="53223" g_length="545"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="543" r_length="543" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E688764" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>545</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E688764" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52679" e_stop="53223"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTCTTTCAAACAAGTGGTTCAAATGCTAACTGGATCATCTGAAACTTCTGCGAAACAATCATCTGCTTCAGATCCATCTTCTTCTTCAAATTCAAATTCAAATTCAGCAAAAAGTTCAATTCCCCCAATTCGAACAGCACCGAAGAAACCTGGGTTCAAGCTTTACGAGAGGAGAAACAGTTTGAAAAATGGGTTTATGATTAGCCCTTTGATTCCTGGAATTCATCCTCAGAATTCGAGTTTTTCTCCTCGGAACAAACCGGAGATTCTCTCACCCAGTATTCTAGATTTTCCTTCACTTGCTTTAAGCCCTGTTACGCCATTGAATGAAGACCCATTTAATAAATCATCACCATTAACGAATCTATCTGAAGAAGATAAAGCTATTGCTGAGAAGAAGTTTTATTTGCATCCTTCACCAAGAAGAACACCGAGAGACTCTGAACCACAGCTTTTGCCTCTGTTTCCGGTGAGTTCTCCTAGAGTTTCAGGGTCTTCTTCTTGAAAGTGAAAATTTTCAGTGATTTGGTGCTGCTGCTGTGA</genome_strand>
        <mrna_strand>TCTTCTTTC-AACAAGTGGTTCAAATGCTAACTGGATCATCTGAAACTTCTGCGAAACAATCATCTGCTTCAGATCCATCTTCTTCTTCAAATTCAAATTCAAATTCAGCAAAAAGTTCAATTCCCCCAATTCGAACAGCACCGAAGAAACCTGGGTTCAAGCTTTACGAGAGGAGAAACAGTTTGAAAAATGGGTTTATGATTAGCCCTTTGATTCCTGGAATTCATCCTCAGAATTCGAGTTTTTCTCCTCGGAACAAACCGGAGATTCTCTCACCCAGTATTCTAGATTTTCCTTCACTTGCTTTAAGCCCTGTTACGCCATTGAATGAAGACCCATTTAATAAATCATCACCATTAACGAATCTATCTGAAGAAGATAAAGCTATTGCTGAGAAGAAGTTTTATTTGCATCCTTCACCAAGAAGAACACCGAGAGACTCTGAACCACAGCTTTTGCCTCTGTTTCCGGTGAGTTCTCCTAGAGTTTCAGGGTCTTCTTCTTNGAAGTGAAAATTTTCAGTGATTT-GTGCTGCTGCTGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E550996" ref_strand="+" ref_description="SGN-E550996 [TUS-54-L20]">
      <seq>tcttctttcaacaagtggttcaaatgctaactggatcatctgaaacttctgcgaaacaatcatctgcttcagatccatcttcttcttcaaattcaaattcaaattcagcaaaaagttcaattcccccaattcgaacagcaccgaagaaacctgggttcaagctttacgagaggagaaacagtttgaaaaatgggtttatgattagccctttgattcctggaattcatcctcagaattcgagtttttctcctcggaacaaaccggagattctctcacccagtattctagattttccttcacttgctttaagccctgttacgccattgaatgaagacccatttaataaatcatcaccattaacgaatctatctgaagaagataaagctattgctgagaagaagttttatttgcatccttcaccaagaagaacaccgagagactctgaaccacagcttttgcctctgtttccggtgagttctcctagagtttcagggtcttcttcttgaaagtgaaaattttcagtgatttgtgctgctgctgtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="52379" stop="53523"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52679" g_stop="53223" g_length="545"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="543" r_length="543" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E550996" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>545</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E550996" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52679" e_stop="53223"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTCTTTCAAACAAGTGGTTCAAATGCTAACTGGATCATCTGAAACTTCTGCGAAACAATCATCTGCTTCAGATCCATCTTCTTCTTCAAATTCAAATTCAAATTCAGCAAAAAGTTCAATTCCCCCAATTCGAACAGCACCGAAGAAACCTGGGTTCAAGCTTTACGAGAGGAGAAACAGTTTGAAAAATGGGTTTATGATTAGCCCTTTGATTCCTGGAATTCATCCTCAGAATTCGAGTTTTTCTCCTCGGAACAAACCGGAGATTCTCTCACCCAGTATTCTAGATTTTCCTTCACTTGCTTTAAGCCCTGTTACGCCATTGAATGAAGACCCATTTAATAAATCATCACCATTAACGAATCTATCTGAAGAAGATAAAGCTATTGCTGAGAAGAAGTTTTATTTGCATCCTTCACCAAGAAGAACACCGAGAGACTCTGAACCACAGCTTTTGCCTCTGTTTCCGGTGAGTTCTCCTAGAGTTTCAGGGTCTTCTTCTTGAAAGTGAAAATTTTCAGTGATTTGGTGCTGCTGCTGTGA</genome_strand>
        <mrna_strand>TCTTCTTTC-AACAAGTGGTTCAAATGCTAACTGGATCATCTGAAACTTCTGCGAAACAATCATCTGCTTCAGATCCATCTTCTTCTTCAAATTCAAATTCAAATTCAGCAAAAAGTTCAATTCCCCCAATTCGAACAGCACCGAAGAAACCTGGGTTCAAGCTTTACGAGAGGAGAAACAGTTTGAAAAATGGGTTTATGATTAGCCCTTTGATTCCTGGAATTCATCCTCAGAATTCGAGTTTTTCTCCTCGGAACAAACCGGAGATTCTCTCACCCAGTATTCTAGATTTTCCTTCACTTGCTTTAAGCCCTGTTACGCCATTGAATGAAGACCCATTTAATAAATCATCACCATTAACGAATCTATCTGAAGAAGATAAAGCTATTGCTGAGAAGAAGTTTTATTTGCATCCTTCACCAAGAAGAACACCGAGAGACTCTGAACCACAGCTTTTGCCTCTGTTTCCGGTGAGTTCTCCTAGAGTTTCAGGGTCTTCTTCTTGAAAGTGAAAATTTTCAGTGATTT-GTGCTGCTGCTGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E551045" ref_strand="+" ref_description="SGN-E551045 [TUS-54-P17]">
      <seq>tcttctttcaacaagtggttcaaatgctaactggatcatctgaaacttctgcgaaacaatcatctgcttcagatccatcttcttcttcaaattcaaattcaaattcagcaaaaagttcaattcccccaattcgaacagcaccgaagaaacctgggttcaagctttacgagaggagaaacagtttgaaaaatgggattatgattagccctttgattcctggaattcatcctcagaattcgagtttttctcctcggaacaaaccggagattctctcacccagtattctagattttccttcacttgctttaagccctgttacgccattgaatgaagacccatttaataaatcatcaccattaacgaatctatctgaagaagataaagctattgctgagaagaagttttatttgcatccttcaccaagaagaacaccgagagactctgaaccacagcttttgcctctgtttccggtgagttctcctagagtttcagggtcttcttcttgnaagtgaaaattttcagtgatttgtgctgctgctgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="52379" stop="53522"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52679" g_stop="53222" g_length="544"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="542" r_length="542" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E551045" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>544</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E551045" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52679" e_stop="53222"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTCTTTCAAACAAGTGGTTCAAATGCTAACTGGATCATCTGAAACTTCTGCGAAACAATCATCTGCTTCAGATCCATCTTCTTCTTCAAATTCAAATTCAAATTCAGCAAAAAGTTCAATTCCCCCAATTCGAACAGCACCGAAGAAACCTGGGTTCAAGCTTTACGAGAGGAGAAACAGTTTGAAAAATGGGTTTATGATTAGCCCTTTGATTCCTGGAATTCATCCTCAGAATTCGAGTTTTTCTCCTCGGAACAAACCGGAGATTCTCTCACCCAGTATTCTAGATTTTCCTTCACTTGCTTTAAGCCCTGTTACGCCATTGAATGAAGACCCATTTAATAAATCATCACCATTAACGAATCTATCTGAAGAAGATAAAGCTATTGCTGAGAAGAAGTTTTATTTGCATCCTTCACCAAGAAGAACACCGAGAGACTCTGAACCACAGCTTTTGCCTCTGTTTCCGGTGAGTTCTCCTAGAGTTTCAGGGTCTTCTTCTTGAAAGTGAAAATTTTCAGTGATTTGGTGCTGCTGCTGTG</genome_strand>
        <mrna_strand>TCTTCTTTC-AACAAGTGGTTCAAATGCTAACTGGATCATCTGAAACTTCTGCGAAACAATCATCTGCTTCAGATCCATCTTCTTCTTCAAATTCAAATTCAAATTCAGCAAAAAGTTCAATTCCCCCAATTCGAACAGCACCGAAGAAACCTGGGTTCAAGCTTTACGAGAGGAGAAACAGTTTGAAAAATGGGATTATGATTAGCCCTTTGATTCCTGGAATTCATCCTCAGAATTCGAGTTTTTCTCCTCGGAACAAACCGGAGATTCTCTCACCCAGTATTCTAGATTTTCCTTCACTTGCTTTAAGCCCTGTTACGCCATTGAATGAAGACCCATTTAATAAATCATCACCATTAACGAATCTATCTGAAGAAGATAAAGCTATTGCTGAGAAGAAGTTTTATTTGCATCCTTCACCAAGAAGAACACCGAGAGACTCTGAACCACAGCTTTTGCCTCTGTTTCCGGTGAGTTCTCCTAGAGTTTCAGGGTCTTCTTCTTGNAAGTGAAAATTTTCAGTGATTT-GTGCTGCTGCTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E688826" ref_strand="+" ref_description="SGN-E688826 [t3_tus_54_P17]">
      <seq>tcttctttcaacaagtggttcaaatgctaactggatcatctgaaacttctgcgaaacaatcatctgcttcagatccatcttcttcttcaaattcaaattcaaattcagcaaaaagttcaattcccccaattcgaacagcaccgaagaaacctgggttcaagctttacgagaggagaaacagtttgaaaaatgggattatgattagccctttgattcctggaattcatcctcagaattcgagtttttctcctcggaacaaaccggagattctctcacccagtattctagattttccttcacttgctttaagccctgttacgccattgaatgaagacccatttaataaatcatcaccattaacgaatctatctgaagaagataaagctattgctgagaagaagttttatttgcatccttcaccaagaagaacaccgagagactctgaaccacagcttttgcctctgtttccggtgagttctcctagagtttcagggtcttcttcttgnaagtgaaaattttcagtgatttgtgctgctgctgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="52379" stop="53522"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52679" g_stop="53222" g_length="544"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="542" r_length="542" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E688826" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>544</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E688826" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52679" e_stop="53222"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTCTTTCAAACAAGTGGTTCAAATGCTAACTGGATCATCTGAAACTTCTGCGAAACAATCATCTGCTTCAGATCCATCTTCTTCTTCAAATTCAAATTCAAATTCAGCAAAAAGTTCAATTCCCCCAATTCGAACAGCACCGAAGAAACCTGGGTTCAAGCTTTACGAGAGGAGAAACAGTTTGAAAAATGGGTTTATGATTAGCCCTTTGATTCCTGGAATTCATCCTCAGAATTCGAGTTTTTCTCCTCGGAACAAACCGGAGATTCTCTCACCCAGTATTCTAGATTTTCCTTCACTTGCTTTAAGCCCTGTTACGCCATTGAATGAAGACCCATTTAATAAATCATCACCATTAACGAATCTATCTGAAGAAGATAAAGCTATTGCTGAGAAGAAGTTTTATTTGCATCCTTCACCAAGAAGAACACCGAGAGACTCTGAACCACAGCTTTTGCCTCTGTTTCCGGTGAGTTCTCCTAGAGTTTCAGGGTCTTCTTCTTGAAAGTGAAAATTTTCAGTGATTTGGTGCTGCTGCTGTG</genome_strand>
        <mrna_strand>TCTTCTTTC-AACAAGTGGTTCAAATGCTAACTGGATCATCTGAAACTTCTGCGAAACAATCATCTGCTTCAGATCCATCTTCTTCTTCAAATTCAAATTCAAATTCAGCAAAAAGTTCAATTCCCCCAATTCGAACAGCACCGAAGAAACCTGGGTTCAAGCTTTACGAGAGGAGAAACAGTTTGAAAAATGGGATTATGATTAGCCCTTTGATTCCTGGAATTCATCCTCAGAATTCGAGTTTTTCTCCTCGGAACAAACCGGAGATTCTCTCACCCAGTATTCTAGATTTTCCTTCACTTGCTTTAAGCCCTGTTACGCCATTGAATGAAGACCCATTTAATAAATCATCACCATTAACGAATCTATCTGAAGAAGATAAAGCTATTGCTGAGAAGAAGTTTTATTTGCATCCTTCACCAAGAAGAACACCGAGAGACTCTGAACCACAGCTTTTGCCTCTGTTTCCGGTGAGTTCTCCTAGAGTTTCAGGGTCTTCTTCTTGNAAGTGAAAATTTTCAGTGATTT-GTGCTGCTGCTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E551020" ref_strand="+" ref_description="SGN-E551020 [TUS-54-N16]">
      <seq>tcttctttcaacaagtggttcaaatgctaactggatcatctgaaacttctgcgaaacaatcatctgcttcagatccatcttcttcttcaaattcaaattcaaattcagcaaaaagttcaattcccccaattcgaacagcaccgaagaaacctgggttcaagctttacgagaggagaaacagtttgaaaaatgggtttatgattagccctttgattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="52379" stop="53195"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52679" g_stop="52895" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="216" r_length="216" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E551020" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>217</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E551020" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52679" e_stop="52895"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTCTTTCAAACAAGTGGTTCAAATGCTAACTGGATCATCTGAAACTTCTGCGAAACAATCATCTGCTTCAGATCCATCTTCTTCTTCAAATTCAAATTCAAATTCAGCAAAAAGTTCAATTCCCCCAATTCGAACAGCACCGAAGAAACCTGGGTTCAAGCTTTACGAGAGGAGAAACAGTTTGAAAAATGGGTTTATGATTAGCCCTTTGATTC</genome_strand>
        <mrna_strand>TCTTCTTTC-AACAAGTGGTTCAAATGCTAACTGGATCATCTGAAACTTCTGCGAAACAATCATCTGCTTCAGATCCATCTTCTTCTTCAAATTCAAATTCAAATTCAGCAAAAAGTTCAATTCCCCCAATTCGAACAGCACCGAAGAAACCTGGGTTCAAGCTTTACGAGAGGAGAAACAGTTTGAAAAATGGGTTTATGATTAGCCCTTTGATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E262827" ref_strand="+" ref_description="SGN-E262827 [cLEG-59-G5]">
      <seq>cttctttcaaacaagtggttcaaatgctaactggatcatctgaaacttctgcgaaacaatcatctgcttcagatccatcttcttcttcaaattcaaattcaaattcagcaaaaagttcaattcccccaattcgaacagcaccgaagaaacctgggttcaagctttacgagaggagaaacagtttgaaaaatgggtttatgattagccctttgattcctggaattcatcctcagaattcgagtttttctcctcggaacaaaccggagattctctcacccagtattctagattttccttcacttgctttaagccctgttacgccattgaatgaagacccatttaataaatcatcaccattaacgaatctatctgaagaagataaagctattgctgagaagaagttttatttgcatccttcaccaagaagaacaccgagagactctgaaccacagcttttgcctctgtttccggtgagttctcctagagtttcagggtcttcttcttgaaagtgaaaattttcagtgatttgtgctgctgctgtgagaaggagaagaatttcaccaacaaaaaaggtagagatcttagtttcaattgtataatttgatctccttttttcatccattgtttcagaaacagattaaaacgaagaaaactgaaataaacaacttttgttcaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="52380" stop="53658"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52680" g_stop="53363" g_length="684"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="683" r_length="683" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E262827" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>684</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E262827" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52680" e_stop="53363"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCTTTCAAACAAGTGGTTCAAATGCTAACTGGATCATCTGAAACTTCTGCGAAACAATCATCTGCTTCAGATCCATCTTCTTCTTCAAATTCAAATTCAAATTCAGCAAAAAGTTCAATTCCCCCAATTCGAACAGCACCGAAGAAACCTGGGTTCAAGCTTTACGAGAGGAGAAACAGTTTGAAAAATGGGTTTATGATTAGCCCTTTGATTCCTGGAATTCATCCTCAGAATTCGAGTTTTTCTCCTCGGAACAAACCGGAGATTCTCTCACCCAGTATTCTAGATTTTCCTTCACTTGCTTTAAGCCCTGTTACGCCATTGAATGAAGACCCATTTAATAAATCATCACCATTAACGAATCTATCTGAAGAAGATAAAGCTATTGCTGAGAAGAAGTTTTATTTGCATCCTTCACCAAGAAGAACACCGAGAGACTCTGAACCACAGCTTTTGCCTCTGTTTCCGGTGAGTTCTCCTAGAGTTTCAGGGTCTTCTTCTTGAAAGTGAAAATTTTCAGTGATTTGGTGCTGCTGCTGTGAGAAGGAGAAGAATTTCACCAACAAAAAAGGTAGAGATCTTAGTTTCAATTGTATAATTTGATCTCCTTTTTTCATCCATTGTTTCAGAAACAGATTAAAACGAAGAAAACTGAAATAAACAACTTTTGTTCCATACTTTT</genome_strand>
        <mrna_strand>CTTCTTTCAAACAAGTGGTTCAAATGCTAACTGGATCATCTGAAACTTCTGCGAAACAATCATCTGCTTCAGATCCATCTTCTTCTTCAAATTCAAATTCAAATTCAGCAAAAAGTTCAATTCCCCCAATTCGAACAGCACCGAAGAAACCTGGGTTCAAGCTTTACGAGAGGAGAAACAGTTTGAAAAATGGGTTTATGATTAGCCCTTTGATTCCTGGAATTCATCCTCAGAATTCGAGTTTTTCTCCTCGGAACAAACCGGAGATTCTCTCACCCAGTATTCTAGATTTTCCTTCACTTGCTTTAAGCCCTGTTACGCCATTGAATGAAGACCCATTTAATAAATCATCACCATTAACGAATCTATCTGAAGAAGATAAAGCTATTGCTGAGAAGAAGTTTTATTTGCATCCTTCACCAAGAAGAACACCGAGAGACTCTGAACCACAGCTTTTGCCTCTGTTTCCGGTGAGTTCTCCTAGAGTTTCAGGGTCTTCTTCTTGAAAGTGAAAATTTTCAGTGATTT-GTGCTGCTGCTGTGAGAAGGAGAAGAATTTCACCAACAAAAAAGGTAGAGATCTTAGTTTCAATTGTATAATTTGATCTCCTTTTTTCATCCATTGTTTCAGAAACAGATTAAAACGAAGAAAACTGAAATAAACAACTTTTGTTCAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E258408" ref_strand="+" ref_description="SGN-E258408 [cLEG-47-E20]">
      <seq>cttctttcaacaagtggttcaaatgctaactggatcatctgaaacttctgcgaaacaatcatctgcttcagatccatcttcttcttcaaattcaaattcaaattcagcaaaaagttcaattcccccaattcgaacagcaccgaagaaacctgggttcaagctttacgagaggagaaacagtttgaaaaatgggtttatgattagccctttgattcctggaattcatcctcagaattcgagtttttctcctcggaacaaaccggagattctctcacccagtattctagattttccttcacttgctttaagccctgttacgccattgaatgaagacccatttaataaatcatcaccattaacgaatctatctgaagaagataaagctattgctgagaagaagttttatttgcatccttcaccaagaagaacaccgagagactctgaaccacagcttttgcctctgtttccggtgagttctcctagagtttcagggtcttcttcttgaaagtgaaaattttcagtgatttgtgctgctgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="52380" stop="53520"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52680" g_stop="53220" g_length="541"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="539" r_length="539" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E258408" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>541</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E258408" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52680" e_stop="53220"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCTTTCAAACAAGTGGTTCAAATGCTAACTGGATCATCTGAAACTTCTGCGAAACAATCATCTGCTTCAGATCCATCTTCTTCTTCAAATTCAAATTCAAATTCAGCAAAAAGTTCAATTCCCCCAATTCGAACAGCACCGAAGAAACCTGGGTTCAAGCTTTACGAGAGGAGAAACAGTTTGAAAAATGGGTTTATGATTAGCCCTTTGATTCCTGGAATTCATCCTCAGAATTCGAGTTTTTCTCCTCGGAACAAACCGGAGATTCTCTCACCCAGTATTCTAGATTTTCCTTCACTTGCTTTAAGCCCTGTTACGCCATTGAATGAAGACCCATTTAATAAATCATCACCATTAACGAATCTATCTGAAGAAGATAAAGCTATTGCTGAGAAGAAGTTTTATTTGCATCCTTCACCAAGAAGAACACCGAGAGACTCTGAACCACAGCTTTTGCCTCTGTTTCCGGTGAGTTCTCCTAGAGTTTCAGGGTCTTCTTCTTGAAAGTGAAAATTTTCAGTGATTTGGTGCTGCTGCTG</genome_strand>
        <mrna_strand>CTTCTTTC-AACAAGTGGTTCAAATGCTAACTGGATCATCTGAAACTTCTGCGAAACAATCATCTGCTTCAGATCCATCTTCTTCTTCAAATTCAAATTCAAATTCAGCAAAAAGTTCAATTCCCCCAATTCGAACAGCACCGAAGAAACCTGGGTTCAAGCTTTACGAGAGGAGAAACAGTTTGAAAAATGGGTTTATGATTAGCCCTTTGATTCCTGGAATTCATCCTCAGAATTCGAGTTTTTCTCCTCGGAACAAACCGGAGATTCTCTCACCCAGTATTCTAGATTTTCCTTCACTTGCTTTAAGCCCTGTTACGCCATTGAATGAAGACCCATTTAATAAATCATCACCATTAACGAATCTATCTGAAGAAGATAAAGCTATTGCTGAGAAGAAGTTTTATTTGCATCCTTCACCAAGAAGAACACCGAGAGACTCTGAACCACAGCTTTTGCCTCTGTTTCCGGTGAGTTCTCCTAGAGTTTCAGGGTCTTCTTCTTGAAAGTGAAAATTTTCAGTGATTT-GTGCTGCTGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E551008" ref_strand="+" ref_description="SGN-E551008 [TUS-54-M20]">
      <seq>tcaaacaagtggttcaaatgctaactggatcatctgaaacttctgccaaacaatcatctgcttcagatccatcttcttcttcaaattcaaattcaaattcagcaaaaagttcaattcccccaattcgaacagcaccgaagaaacctgggttcaagctttacgagaggagaaacagtttgaaaaatgggtttatgattagccctttgattcctggaattcatcctcagaattcgagtttttctcctcggaacaaaccggagattctctcacccagtattctagattttccttcacttgctttaagccctgttacgccattgaatgaagacccatttaataaatcatcaccattaacgaatctatctgaagaagataaagctattgctgagaagaagttttatttgcatccttcaccaagaagaacaccgagagactctgaaccacagcttttgcctctgtttccggtgagttctcctagagtttcaaggtcttcttcttgaaagtgaaaattttcagtgatttgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="52386" stop="53511"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52686" g_stop="53207" g_length="522"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="522" r_length="522" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E551008" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>522</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E551008" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52686" e_stop="53207"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAACAAGTGGTTCAAATGCTAACTGGATCATCTGAAACTTCTGCGAAACAATCATCTGCTTCAGATCCATCTTCTTCTTCAAATTCAAATTCAAATTCAGCAAAAAGTTCAATTCCCCCAATTCGAACAGCACCGAAGAAACCTGGGTTCAAGCTTTACGAGAGGAGAAACAGTTTGAAAAATGGGTTTATGATTAGCCCTTTGATTCCTGGAATTCATCCTCAGAATTCGAGTTTTTCTCCTCGGAACAAACCGGAGATTCTCTCACCCAGTATTCTAGATTTTCCTTCACTTGCTTTAAGCCCTGTTACGCCATTGAATGAAGACCCATTTAATAAATCATCACCATTAACGAATCTATCTGAAGAAGATAAAGCTATTGCTGAGAAGAAGTTTTATTTGCATCCTTCACCAAGAAGAACACCGAGAGACTCTGAACCACAGCTTTTGCCTCTGTTTCCGGTGAGTTCTCCTAGAGTTTCAGGGTCTTCTTCTTGAAAGTGAAAATTTTCAGTGATTT</genome_strand>
        <mrna_strand>TCAAACAAGTGGTTCAAATGCTAACTGGATCATCTGAAACTTCTGCCAAACAATCATCTGCTTCAGATCCATCTTCTTCTTCAAATTCAAATTCAAATTCAGCAAAAAGTTCAATTCCCCCAATTCGAACAGCACCGAAGAAACCTGGGTTCAAGCTTTACGAGAGGAGAAACAGTTTGAAAAATGGGTTTATGATTAGCCCTTTGATTCCTGGAATTCATCCTCAGAATTCGAGTTTTTCTCCTCGGAACAAACCGGAGATTCTCTCACCCAGTATTCTAGATTTTCCTTCACTTGCTTTAAGCCCTGTTACGCCATTGAATGAAGACCCATTTAATAAATCATCACCATTAACGAATCTATCTGAAGAAGATAAAGCTATTGCTGAGAAGAAGTTTTATTTGCATCCTTCACCAAGAAGAACACCGAGAGACTCTGAACCACAGCTTTTGCCTCTGTTTCCGGTGAGTTCTCCTAGAGTTTCAAGGTCTTCTTCTTGAAAGTGAAAATTTTCAGTGATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E688780" ref_strand="+" ref_description="SGN-E688780 [t3_tus_54_M20]">
      <seq>tcaaacaagtggttcaaatgctaactggatcatctgaaacttctgccaaacaatcatctgcttcagatccatcttcttcttcaaattcaaattcaaattcagcaaaaagttcaattcccccaattcgaacagcaccgaagaaacctgggttcaagctttacgagaggagaaacagtttgaaaaatgggtttatgattagccctttgattcctggaattcatcctcagaattcgagtttttctcctcggaacaaaccggagattctctcacccagtattctagattttccttcacttgctttaagccctgttacgccattgaatgaagacccatttaataaatcatcaccattaacgaatctatctgaagaagataaagctattgctgagaagaagttttatttgcatccttcaccaagaagaacaccgagagactctgaaccacagcttttgcctctgtttccggtgagttctcctagagtttcaaggtcttcttcttgaaagtgaaaattttcagtgatttgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="52386" stop="53511"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52686" g_stop="53207" g_length="522"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="522" r_length="522" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E688780" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>522</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E688780" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52686" e_stop="53207"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAACAAGTGGTTCAAATGCTAACTGGATCATCTGAAACTTCTGCGAAACAATCATCTGCTTCAGATCCATCTTCTTCTTCAAATTCAAATTCAAATTCAGCAAAAAGTTCAATTCCCCCAATTCGAACAGCACCGAAGAAACCTGGGTTCAAGCTTTACGAGAGGAGAAACAGTTTGAAAAATGGGTTTATGATTAGCCCTTTGATTCCTGGAATTCATCCTCAGAATTCGAGTTTTTCTCCTCGGAACAAACCGGAGATTCTCTCACCCAGTATTCTAGATTTTCCTTCACTTGCTTTAAGCCCTGTTACGCCATTGAATGAAGACCCATTTAATAAATCATCACCATTAACGAATCTATCTGAAGAAGATAAAGCTATTGCTGAGAAGAAGTTTTATTTGCATCCTTCACCAAGAAGAACACCGAGAGACTCTGAACCACAGCTTTTGCCTCTGTTTCCGGTGAGTTCTCCTAGAGTTTCAGGGTCTTCTTCTTGAAAGTGAAAATTTTCAGTGATTT</genome_strand>
        <mrna_strand>TCAAACAAGTGGTTCAAATGCTAACTGGATCATCTGAAACTTCTGCCAAACAATCATCTGCTTCAGATCCATCTTCTTCTTCAAATTCAAATTCAAATTCAGCAAAAAGTTCAATTCCCCCAATTCGAACAGCACCGAAGAAACCTGGGTTCAAGCTTTACGAGAGGAGAAACAGTTTGAAAAATGGGTTTATGATTAGCCCTTTGATTCCTGGAATTCATCCTCAGAATTCGAGTTTTTCTCCTCGGAACAAACCGGAGATTCTCTCACCCAGTATTCTAGATTTTCCTTCACTTGCTTTAAGCCCTGTTACGCCATTGAATGAAGACCCATTTAATAAATCATCACCATTAACGAATCTATCTGAAGAAGATAAAGCTATTGCTGAGAAGAAGTTTTATTTGCATCCTTCACCAAGAAGAACACCGAGAGACTCTGAACCACAGCTTTTGCCTCTGTTTCCGGTGAGTTCTCCTAGAGTTTCAAGGTCTTCTTCTTGAAAGTGAAAATTTTCAGTGATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E551345" ref_strand="+" ref_description="SGN-E551345 [TUS-54-N20]">
      <seq>gatcatctgaaacttctgcaaaacaatcatctgcttcagatccatcttcttcttcaaattcaaattcaaattcaggaaaaagttcaattcccccaattcgaacagcaccgaagaaacctgggttcaagctttacgagaggagaaacagtttgaaaaatgggtttatgattacccctttgattcctggaattcatcctcagaattcgagtttttctcctcggaacaaaccggagattctctcacccagtattctagattttccttcacttgctttaagccctgttacgccattgaatgaagacccatttaataaatcatcaccattaacgaatctatctgaagaagataaagctattgctgagaagaagttttatttgcatcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="52413" stop="53395"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52713" g_stop="53095" g_length="383"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="383" r_length="383" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E551345" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>383</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E551345" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52713" e_stop="53095"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCATCTGAAACTTCTGCGAAACAATCATCTGCTTCAGATCCATCTTCTTCTTCAAATTCAAATTCAAATTCAGCAAAAAGTTCAATTCCCCCAATTCGAACAGCACCGAAGAAACCTGGGTTCAAGCTTTACGAGAGGAGAAACAGTTTGAAAAATGGGTTTATGATTAGCCCTTTGATTCCTGGAATTCATCCTCAGAATTCGAGTTTTTCTCCTCGGAACAAACCGGAGATTCTCTCACCCAGTATTCTAGATTTTCCTTCACTTGCTTTAAGCCCTGTTACGCCATTGAATGAAGACCCATTTAATAAATCATCACCATTAACGAATCTATCTGAAGAAGATAAAGCTATTGCTGAGAAGAAGTTTTATTTGCATCCT</genome_strand>
        <mrna_strand>GATCATCTGAAACTTCTGCAAAACAATCATCTGCTTCAGATCCATCTTCTTCTTCAAATTCAAATTCAAATTCAGGAAAAAGTTCAATTCCCCCAATTCGAACAGCACCGAAGAAACCTGGGTTCAAGCTTTACGAGAGGAGAAACAGTTTGAAAAATGGGTTTATGATTACCCCTTTGATTCCTGGAATTCATCCTCAGAATTCGAGTTTTTCTCCTCGGAACAAACCGGAGATTCTCTCACCCAGTATTCTAGATTTTCCTTCACTTGCTTTAAGCCCTGTTACGCCATTGAATGAAGACCCATTTAATAAATCATCACCATTAACGAATCTATCTGAAGAAGATAAAGCTATTGCTGAGAAGAAGTTTTATTTGCATCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E551341" ref_strand="+" ref_description="SGN-E551341 [TUS-54-M17]">
      <seq>atctgaaacttctgcgaaacaatcatctgcttcagatccatcttcttcttcaaattcaaattcaaattcagcaaaaagttcaattcccccaattcgaacagcaccgaagaaacctgggttcaagctttacgagaggagaaacagtttgaaaaatgggtttatgattagccctttgattcctggaattcatcctcagaattcgagtttttctcctcggaacaaaccggagattctctcacccagtattctagattttccttcacttgctttaagccctgttacgccattgaatgaagacccatttaataaatcatcaccattaacgaatctatctgaagaagataaagctattgctgagaagaagttttatttgcatccttcaccaagaagaacaccgagagactctgaacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="52417" stop="53427"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52717" g_stop="53127" g_length="411"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="411" r_length="411" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E551341" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>411</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E551341" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52717" e_stop="53127"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTGAAACTTCTGCGAAACAATCATCTGCTTCAGATCCATCTTCTTCTTCAAATTCAAATTCAAATTCAGCAAAAAGTTCAATTCCCCCAATTCGAACAGCACCGAAGAAACCTGGGTTCAAGCTTTACGAGAGGAGAAACAGTTTGAAAAATGGGTTTATGATTAGCCCTTTGATTCCTGGAATTCATCCTCAGAATTCGAGTTTTTCTCCTCGGAACAAACCGGAGATTCTCTCACCCAGTATTCTAGATTTTCCTTCACTTGCTTTAAGCCCTGTTACGCCATTGAATGAAGACCCATTTAATAAATCATCACCATTAACGAATCTATCTGAAGAAGATAAAGCTATTGCTGAGAAGAAGTTTTATTTGCATCCTTCACCAAGAAGAACACCGAGAGACTCTGAACC</genome_strand>
        <mrna_strand>ATCTGAAACTTCTGCGAAACAATCATCTGCTTCAGATCCATCTTCTTCTTCAAATTCAAATTCAAATTCAGCAAAAAGTTCAATTCCCCCAATTCGAACAGCACCGAAGAAACCTGGGTTCAAGCTTTACGAGAGGAGAAACAGTTTGAAAAATGGGTTTATGATTAGCCCTTTGATTCCTGGAATTCATCCTCAGAATTCGAGTTTTTCTCCTCGGAACAAACCGGAGATTCTCTCACCCAGTATTCTAGATTTTCCTTCACTTGCTTTAAGCCCTGTTACGCCATTGAATGAAGACCCATTTAATAAATCATCACCATTAACGAATCTATCTGAAGAAGATAAAGCTATTGCTGAGAAGAAGTTTTATTTGCATCCTTCACCAAGAAGAACACCGAGAGACTCTGAACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E688777" ref_strand="+" ref_description="SGN-E688777 [t3_tus_54_M17]">
      <seq>atctgaaacttctgcgaaacaatcatctgcttcagatccatcttcttcttcaaattcaaattcaaattcagcaaaaagttcaattcccccaattcgaacagcaccgaagaaacctgggttcaagctttacgagaggagaaacagtttgaaaaatgggtttatgattagccctttgattcctggaattcatcctcagaattcgagtttttctcctcggaacaaaccggagattctctcacccagtattctagattttccttcacttgctttaagccctgttacgccattgaatgaagacccatttaataaatcatcaccattaacgaatctatctgaagaagataaagctattgctgagaagaagttttatttgcatccttcaccaagaagaacaccgagagactctgaacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="52417" stop="53427"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52717" g_stop="53127" g_length="411"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="411" r_length="411" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E688777" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>411</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E688777" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52717" e_stop="53127"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTGAAACTTCTGCGAAACAATCATCTGCTTCAGATCCATCTTCTTCTTCAAATTCAAATTCAAATTCAGCAAAAAGTTCAATTCCCCCAATTCGAACAGCACCGAAGAAACCTGGGTTCAAGCTTTACGAGAGGAGAAACAGTTTGAAAAATGGGTTTATGATTAGCCCTTTGATTCCTGGAATTCATCCTCAGAATTCGAGTTTTTCTCCTCGGAACAAACCGGAGATTCTCTCACCCAGTATTCTAGATTTTCCTTCACTTGCTTTAAGCCCTGTTACGCCATTGAATGAAGACCCATTTAATAAATCATCACCATTAACGAATCTATCTGAAGAAGATAAAGCTATTGCTGAGAAGAAGTTTTATTTGCATCCTTCACCAAGAAGAACACCGAGAGACTCTGAACC</genome_strand>
        <mrna_strand>ATCTGAAACTTCTGCGAAACAATCATCTGCTTCAGATCCATCTTCTTCTTCAAATTCAAATTCAAATTCAGCAAAAAGTTCAATTCCCCCAATTCGAACAGCACCGAAGAAACCTGGGTTCAAGCTTTACGAGAGGAGAAACAGTTTGAAAAATGGGTTTATGATTAGCCCTTTGATTCCTGGAATTCATCCTCAGAATTCGAGTTTTTCTCCTCGGAACAAACCGGAGATTCTCTCACCCAGTATTCTAGATTTTCCTTCACTTGCTTTAAGCCCTGTTACGCCATTGAATGAAGACCCATTTAATAAATCATCACCATTAACGAATCTATCTGAAGAAGATAAAGCTATTGCTGAGAAGAAGTTTTATTTGCATCCTTCACCAAGAAGAACACCGAGAGACTCTGAACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E369581" ref_strand="-" ref_description="SGN-E369581 [TUS-25-L6]">
      <seq>aatggtgaagaatttaggccggtctctgtggaatttggtgctgaagaaaatagtcagctccaacaagtttctgttgaagaaaatcaggaaaaggaaaatggaaatgttgaaggtgaaggtgaacagaggagggatgcagggaaccaaaagaagagcctagtgtggtggtggaaggttccaatacatcttgtcaagtattgtgctgcttttagagttagccctgtgtggacattttctgctgctgctgctgctattatggctttcgttattttggttcgtaggttatctaagatgaagaaaaacaccaaggcattgaagctcaaactaactgtggatgacaagaatgtatctcagttcacaaaccgtgctgcacgccttaacgaagcattctctattgtgaagcgggttcctctcattcggccacagttgccagccgctggagacacagtgtggcctctgatgactttgagataggctgtaatatttccccatttgatatgttgtgtcgcttcagcgattgtataatctactatgtttactgctgttgtttgatctcaaacctatgtatattcactggccaaagaaattgctggcttatgcttctttatatagaaagctgctttttgatctcaaaaaaaaaaaaaaaaaactcagacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="63185" stop="18121"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62885" g_stop="62251" g_length="635"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="635" r_length="635" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62250" i_stop="62056" i_length="195">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62055" g_stop="62033" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="636" r_stop="658" r_length="23" r_score="0.435"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E369581" ref_strand="-">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>658</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E369581" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="62885" e_stop="62251"/>
          <exon e_start="62055" e_stop="62033"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGGTGAAGAATTTAGGCCGGTCTCTGTGGAATTTGGTGCTGGAGAAAATAGTCAGCTCCAACAAGTTTCTGTTGAAGAAAATCAGGAAAAGGAAAATGGAAATGTTGAAGGTGAAGGTGAACAGAGGAGGGATGCAGGGAACCAAAAGAAGAGCCTAGTGTGGTGGTGGAAGGTTCCAATACATCTTGTCAAGTATTGTGCTGCTTTTAGAGTTAGCCCTGTGTGGACATTTTCTGCTGCTGCTGCTGCTATTATGGCTTTCGTTATTTTGGTTCGTAGGTTATCTAAGATGAAGAAAAACACCAAGGCATTGAAGCTCAAACTAACTGTGGATGACAAGAATGTATCTCAGTTCACAAACCGTGCTGCACGCCTTAACGAAGCATTCTCTATTGTGAAGCGGGTTCCTCTCATTCGGCCACAGTTGCCAGCCGCTGGAGACACAGTGTGGCCTCTGATGACTTTGAGATAGGCTGTAATATTTCCCCATTTGATATGTTGTGTCGCTTCAGCGATTGTATAATCTACTATGTTTACTGCTGTTGTTTGATCTCAAACCTATGTATATTCACTGGCCAAAGAAATTGCTGGCTTATGCTTCTTTATATAGAAAGCTGCTTTTTGATCTCAAAGGTGGTTTTGCTTGTGCCTTAAATCTGGTAAAATTTCACAATATCTATTCCAAGATTTGTTTTTTATGAGGTTAATCATGTTTAGATTGCTTAATCCATTACACAATTAGAAATGTTGGATTCAAAATTTGATCTTTATTGAATTTCTTAGTACTTTGTACGTATATATCTATATTTCTGTGTTAAAAATGTCAAGGTGGGAACCATAAAGTCTTAGGA</genome_strand>
        <mrna_strand>AATGGTGAAGAATTTAGGCCGGTCTCTGTGGAATTTGGTGCTGAAGAAAATAGTCAGCTCCAACAAGTTTCTGTTGAAGAAAATCAGGAAAAGGAAAATGGAAATGTTGAAGGTGAAGGTGAACAGAGGAGGGATGCAGGGAACCAAAAGAAGAGCCTAGTGTGGTGGTGGAAGGTTCCAATACATCTTGTCAAGTATTGTGCTGCTTTTAGAGTTAGCCCTGTGTGGACATTTTCTGCTGCTGCTGCTGCTATTATGGCTTTCGTTATTTTGGTTCGTAGGTTATCTAAGATGAAGAAAAACACCAAGGCATTGAAGCTCAAACTAACTGTGGATGACAAGAATGTATCTCAGTTCACAAACCGTGCTGCACGCCTTAACGAAGCATTCTCTATTGTGAAGCGGGTTCCTCTCATTCGGCCACAGTTGCCAGCCGCTGGAGACACAGTGTGGCCTCTGATGACTTTGAGATAGGCTGTAATATTTCCCCATTTGATATGTTGTGTCGCTTCAGCGATTGTATAATCTACTATGTTTACTGCTGTTGTTTGATCTCAAACCTATGTATATTCACTGGCCAAAGAAATTGCTGGCTTATGCTTCTTTATATAGAAAGCTGCTTTTTGATCTCAAAA...................................................................................................................................................................................................AAAAAAAAAAAAAACTCAGACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E249014" ref_strand="-" ref_description="SGN-E249014 [cLEF-49-O15]">
      <seq>caggaaaaggaaaatggaaatgttgaaggtgaaggtgaacagaggagggatgcagggaaccaaaagaagagcctagtgtggtggtggaaggttccaatacatcttgtcaagtattgtgctgcttttagagttagccctgtgtggacattttctgctgctgctgctgctattatggctttcgttattttggttcgtaggttatctaagatgaagaaaaacaccaaggcattgaagctcaaactaactgtggatgacaagaatgtatctcagttcacaaaccgtgctgcacgccttaacgaagcattctctattgtgaagcgggttcctctcattcggccacagttgccagccgctggagacacagtgtggcctctgatgactttgagataggctgtaatatttccccatttgatatgttgtgtcgcttcagcgattgtataatctactatgtttactgctgttgtttgatctcaaacctatgtatattcactggccaaagaaattgctggcttatgcttctttatatagaaagctgctttttgatctcaaaaaaaaaaaaaaaaaactcagacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="63101" stop="18121"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62801" g_stop="62251" g_length="551"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="551" r_length="551" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62250" i_stop="62056" i_length="195">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62055" g_stop="62033" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="552" r_stop="574" r_length="23" r_score="0.435"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E249014" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E249014" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="62801" e_stop="62251"/>
          <exon e_start="62055" e_stop="62033"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGAAAAGGAAAATGGAAATGTTGAAGGTGAAGGTGAACAGAGGAGGGATGCAGGGAACCAAAAGAAGAGCCTAGTGTGGTGGTGGAAGGTTCCAATACATCTTGTCAAGTATTGTGCTGCTTTTAGAGTTAGCCCTGTGTGGACATTTTCTGCTGCTGCTGCTGCTATTATGGCTTTCGTTATTTTGGTTCGTAGGTTATCTAAGATGAAGAAAAACACCAAGGCATTGAAGCTCAAACTAACTGTGGATGACAAGAATGTATCTCAGTTCACAAACCGTGCTGCACGCCTTAACGAAGCATTCTCTATTGTGAAGCGGGTTCCTCTCATTCGGCCACAGTTGCCAGCCGCTGGAGACACAGTGTGGCCTCTGATGACTTTGAGATAGGCTGTAATATTTCCCCATTTGATATGTTGTGTCGCTTCAGCGATTGTATAATCTACTATGTTTACTGCTGTTGTTTGATCTCAAACCTATGTATATTCACTGGCCAAAGAAATTGCTGGCTTATGCTTCTTTATATAGAAAGCTGCTTTTTGATCTCAAAGGTGGTTTTGCTTGTGCCTTAAATCTGGTAAAATTTCACAATATCTATTCCAAGATTTGTTTTTTATGAGGTTAATCATGTTTAGATTGCTTAATCCATTACACAATTAGAAATGTTGGATTCAAAATTTGATCTTTATTGAATTTCTTAGTACTTTGTACGTATATATCTATATTTCTGTGTTAAAAATGTCAAGGTGGGAACCATAAAGTCTTAGGA</genome_strand>
        <mrna_strand>CAGGAAAAGGAAAATGGAAATGTTGAAGGTGAAGGTGAACAGAGGAGGGATGCAGGGAACCAAAAGAAGAGCCTAGTGTGGTGGTGGAAGGTTCCAATACATCTTGTCAAGTATTGTGCTGCTTTTAGAGTTAGCCCTGTGTGGACATTTTCTGCTGCTGCTGCTGCTATTATGGCTTTCGTTATTTTGGTTCGTAGGTTATCTAAGATGAAGAAAAACACCAAGGCATTGAAGCTCAAACTAACTGTGGATGACAAGAATGTATCTCAGTTCACAAACCGTGCTGCACGCCTTAACGAAGCATTCTCTATTGTGAAGCGGGTTCCTCTCATTCGGCCACAGTTGCCAGCCGCTGGAGACACAGTGTGGCCTCTGATGACTTTGAGATAGGCTGTAATATTTCCCCATTTGATATGTTGTGTCGCTTCAGCGATTGTATAATCTACTATGTTTACTGCTGTTGTTTGATCTCAAACCTATGTATATTCACTGGCCAAAGAAATTGCTGGCTTATGCTTCTTTATATAGAAAGCTGCTTTTTGATCTCAAAA...................................................................................................................................................................................................AAAAAAAAAAAAAACTCAGACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E623465" ref_strand="+" ref_description="SGN-E623465 [88557]">
      <seq>cctgagacgatcggtgtgattcaacccaattacttctctctagactctcaaatcaggtatatgggtacgttttctgcggatggaagcgaggaggactctgaaaaatcggataatccgagtttggattgagcccgattctgaaaacaacgagtttacccatgaagaattctcgcgaattctggtcgggattccagcagtgaggggtaaaaatgaattgggtttgaagagatgaaaagtgaaaatggtgaagaatttaggccggattctgtgaaatttggtgctggagaaaatagtcatctgcaacaagtttctgttgaagaaaatcaggaaaaggaaaatggaaatgttgaaggtgaacagaggagggatgcaggggaccaaaagaagagcctagtgtggtgcgtggaaggtgccaatacatcttgtcaagtattgtgctgcttttagagttagccccgtgtggacattttctgctgctgctgctgctattatggcttttgttattttggttcgtaggttgtctaagatgaagaaaaagaccaaggcattgaagctcaaactaactgtggatgacaggaatgtatctcagttcacaaaccgtgctgcacgccttaacgaagcattctctattgtgaagcgggttcctctgattcggccacagttgccaccgctggagacacagtgtggcctcaatgacttggagatagactgttatatttccccatttgactatgttgtgtcgctttctgtgatttgtataaatctactatgtttaacttgctgttggttgatctcaaaacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="63421" stop="62025"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63122" g_stop="62324" g_length="799"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="801" r_length="801" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E623465" ref_strand="+">
        <total_alignment_score>0.922</total_alignment_score>
        <cumulative_length_of_scored_exons>799</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E623465" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63122" e_stop="62324"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGAGACGATCGGTGTGATTCAACCCAATTACTTTTCTCTAGACTCTCAAATCAGGTATATGAGTACGTTTTCTAAGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAG-TTGGATTGAGCCCGATTCTGATAACAACGAGTTTA-CCATGAAGAATTCTCGCGAATTATGGTC-GGATTCCGGCAGTGA-GGGTAAAAATGAATTGGCTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGTCTCTGTGGAATTTGGTGCTGGAGAAAATAGTCAGCTCCAACAAGTTTCTGTTGAAGAAAATCAGGAAAAGGAAAATGGAAATGTTGAAGGTGAAGGTGAACAGAGGAGGGATGCAGGGAACCAAAAGAAGAGCCTAGTGTGGTG-GTGGAAGGTTCCAATACATCTTGTCAAGTATTGTGCTGCTTTTAGAGTTAGCCCTGTGTGGACATTTTCTGCTGCTGCTGCTGCTATTATGGCTTTCGTTATTTTGGTTCGTAGGTTATCTAAGATGAAGAAAAACACCAAGGCATTGAAGCTCAAACTAACTGTGGATGACAAGAATGTATCTCAGTTCACAAACCGTGCTGCACGCCTTAACGAAGCATTCTCTATTGTGAAGCGGGTTCCTCTCATTCGGCCACAGTTGCCAGCCGCTGGAGACACAGTGTGGCCTCTGATGACTTTGAGATAGGCTGTAATATTTCCCCATTTGA-TATGTTGTGTCGC-TTCAGCGA-TTGTAT-AATCTACTATGTTT-AC-TGCTGTTGTTTGATCTCAAACCT</genome_strand>
        <mrna_strand>CCTGAGACGATCGGTGTGATTCAACCCAATTACTTCTCTCTAGACTCTCAAATCAGGTATATGGGTACGTTTTCTGCGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTTGGATTGAGCCCGATTCTGAAAACAACGAGTTTACCCATGAAGAATTCTCGCGAATTCTGGTCGGGATTCCAGCAGTGAGGGGTAAAAATGAATTGG-GTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGATTCTGTGAAATTTGGTGCTGGAGAAAATAGTCATCTGCAACAAGTTTCTGTTGAAGAAAATCAGGAAAAGGAAAATGGAAATG-T-----TGAAGGTGAACAGAGGAGGGATGCAGGGGACCAAAAGAAGAGCCTAGTGTGGTGCGTGGAAGGTGCCAATACATCTTGTCAAGTATTGTGCTGCTTTTAGAGTTAGCCCCGTGTGGACATTTTCTGCTGCTGCTGCTGCTATTATGGCTTTTGTTATTTTGGTTCGTAGGTTGTCTAAGATGAAGAAAAAGACCAAGGCATTGAAGCTCAAACTAACTGTGGATGACAGGAATGTATCTCAGTTCACAAACCGTGCTGCACGCCTTAACGAAGCATTCTCTATTGTGAAGCGGGTTCCTCTGATTCGGCCACAGTTGCCA-CCGCTGGAGACACAGTGTGGCCTC-AATGACTTGGAGATAGACTGTTATATTTCCCCATTTGACTATGTTGTGTCGCTTTCTGTGATTTGTATAAATCTACTATGTTTAACTTGCTGTTGGTTGATCTCAAAACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E704117" ref_strand="+" ref_description="SGN-E704117 [FA23BF03]">
      <seq>ctcttttacgtaatttagggtttgatcagcaccatggatgttgaggcaggcgagttccaagagtgggagatgattccctcgaaccgggcatctgactcggaaccgttaactccggatggttcagccggaaactcgaacggtgtcgatgaagttggatctgagacgatcggtgtgattcaacccaattacttttctctagactctcaaatcaggtatatgagtacgttttctaaggatggaagcgaggaggactctgaaaaatcggataatccgagttggattgagcccgattctgataacaacgagtttaccatgaagaattctcgcgaattatggtcggattccggcagtgagggtaaaaatgaattggcttttgaagagatgaaaagtgaaaatggtgaagaatttaggccggtctctgtggaatttggtgctggagaaaatagtcagctccaacaagtttctgttgaagaaaatcaggaaaaggaaaatggaaatgttgaaggtgaaggtgaacagaggagggatgcagggaaccaaaagaagagcctagtgtggtggtggaaggttccaatacatcttgtcaagtattgtgctgcttttagagttagccctgtgtggacattttctgctgctgctgctgctattatggctttcgttattttggttcgtaggttatctaagatgaagaaaaacaccaaggcattgaagctcaaactaactgtggatgacaagaatgtatctcagttcacaaaccgtgctgcacgccttaacgaagcattctctattgtgaagcgggttcctctcattcggccacagttgccagccgctggagacacagtgtggcctctgatgactttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="63578" stop="62118"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63278" g_stop="62418" g_length="861"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="861" r_length="861" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E704117" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>861</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E704117" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63278" e_stop="62418"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTTTTACGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGGCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACTCGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTTTCTCTAGACTCTCAAATCAGGTATATGAGTACGTTTTCTAAGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGATAACAACGAGTTTACCATGAAGAATTCTCGCGAATTATGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGCTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGTCTCTGTGGAATTTGGTGCTGGAGAAAATAGTCAGCTCCAACAAGTTTCTGTTGAAGAAAATCAGGAAAAGGAAAATGGAAATGTTGAAGGTGAAGGTGAACAGAGGAGGGATGCAGGGAACCAAAAGAAGAGCCTAGTGTGGTGGTGGAAGGTTCCAATACATCTTGTCAAGTATTGTGCTGCTTTTAGAGTTAGCCCTGTGTGGACATTTTCTGCTGCTGCTGCTGCTATTATGGCTTTCGTTATTTTGGTTCGTAGGTTATCTAAGATGAAGAAAAACACCAAGGCATTGAAGCTCAAACTAACTGTGGATGACAAGAATGTATCTCAGTTCACAAACCGTGCTGCACGCCTTAACGAAGCATTCTCTATTGTGAAGCGGGTTCCTCTCATTCGGCCACAGTTGCCAGCCGCTGGAGACACAGTGTGGCCTCTGATGACTTTG</genome_strand>
        <mrna_strand>CTCTTTTACGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGGCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACTCGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTTTCTCTAGACTCTCAAATCAGGTATATGAGTACGTTTTCTAAGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGATAACAACGAGTTTACCATGAAGAATTCTCGCGAATTATGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGCTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGTCTCTGTGGAATTTGGTGCTGGAGAAAATAGTCAGCTCCAACAAGTTTCTGTTGAAGAAAATCAGGAAAAGGAAAATGGAAATGTTGAAGGTGAAGGTGAACAGAGGAGGGATGCAGGGAACCAAAAGAAGAGCCTAGTGTGGTGGTGGAAGGTTCCAATACATCTTGTCAAGTATTGTGCTGCTTTTAGAGTTAGCCCTGTGTGGACATTTTCTGCTGCTGCTGCTGCTATTATGGCTTTCGTTATTTTGGTTCGTAGGTTATCTAAGATGAAGAAAAACACCAAGGCATTGAAGCTCAAACTAACTGTGGATGACAAGAATGTATCTCAGTTCACAAACCGTGCTGCACGCCTTAACGAAGCATTCTCTATTGTGAAGCGGGTTCCTCTCATTCGGCCACAGTTGCCAGCCGCTGGAGACACAGTGTGGCCTCTGATGACTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E731956" ref_strand="+" ref_description="SGN-E731956 [LA28CG01]">
      <seq>aatggataagagccttatttcttctctcccccaacctgtccccccctctgtatctctcttttacgtaatttagggtttgatcagcaccatggatgttgaggcaggcgagttccaagagtgggagatgattccctcgaaccgggcatctgactcggaaccgttaactccggatggttcagccggaaactcgaacggtgtcgatgaagttggatctgagacgatcggtgtgattcaacccaattacttttctctagactctcaaatcaggtatatgagtacgttttctaaggatggaagcgaggaggactctgaaaaatcggataatccgagttggattgagcccgattctgataacaacgagtttaccatgaagaattctcgcgaattatggtcggattccggcagtgagggtaaaaatgaattggcttttgaagagatgaaaagtgaaaatggtgaagaatttaggccggtctctgtggaatttggtgctggagaaaatagtcagctccaacaagtttctgttgaagaaaatcaggaaaaggaaaatggaaatgttgaaggtgaaggtgaacagaggagggatgcagggaaccaaaagaagagcctagtgtggtggtggaaggttccaatacatcttgtcaagtattgtgctgcttttagagttagccctgtgtggacattttctgctgctgctgctgctattatggctttcgttattttggttcgtaggttatctaagatgaagaaaaacaccaaggcattgaagctcaaactaactgtggatgacaagaatgtatctcagttcacaaaccgtgctgcacg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="63633" stop="62212"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63333" g_stop="62512" g_length="822"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="822" r_length="822" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E731956" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>822</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E731956" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63333" e_stop="62512"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGGATAAGAGCCTTATTTCTTCTCTCCCCCAACCTGTCCCCCCCTCTGTATCTCTCTTTTACGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGGCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACTCGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTTTCTCTAGACTCTCAAATCAGGTATATGAGTACGTTTTCTAAGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGATAACAACGAGTTTACCATGAAGAATTCTCGCGAATTATGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGCTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGTCTCTGTGGAATTTGGTGCTGGAGAAAATAGTCAGCTCCAACAAGTTTCTGTTGAAGAAAATCAGGAAAAGGAAAATGGAAATGTTGAAGGTGAAGGTGAACAGAGGAGGGATGCAGGGAACCAAAAGAAGAGCCTAGTGTGGTGGTGGAAGGTTCCAATACATCTTGTCAAGTATTGTGCTGCTTTTAGAGTTAGCCCTGTGTGGACATTTTCTGCTGCTGCTGCTGCTATTATGGCTTTCGTTATTTTGGTTCGTAGGTTATCTAAGATGAAGAAAAACACCAAGGCATTGAAGCTCAAACTAACTGTGGATGACAAGAATGTATCTCAGTTCACAAACCGTGCTGCACG</genome_strand>
        <mrna_strand>AATGGATAAGAGCCTTATTTCTTCTCTCCCCCAACCTGTCCCCCCCTCTGTATCTCTCTTTTACGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGGCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACTCGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTTTCTCTAGACTCTCAAATCAGGTATATGAGTACGTTTTCTAAGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGATAACAACGAGTTTACCATGAAGAATTCTCGCGAATTATGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGCTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGTCTCTGTGGAATTTGGTGCTGGAGAAAATAGTCAGCTCCAACAAGTTTCTGTTGAAGAAAATCAGGAAAAGGAAAATGGAAATGTTGAAGGTGAAGGTGAACAGAGGAGGGATGCAGGGAACCAAAAGAAGAGCCTAGTGTGGTGGTGGAAGGTTCCAATACATCTTGTCAAGTATTGTGCTGCTTTTAGAGTTAGCCCTGTGTGGACATTTTCTGCTGCTGCTGCTGCTATTATGGCTTTCGTTATTTTGGTTCGTAGGTTATCTAAGATGAAGAAAAACACCAAGGCATTGAAGCTCAAACTAACTGTGGATGACAAGAATGTATCTCAGTTCACAAACCGTGCTGCACG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E604275" ref_strand="+" ref_description="SGN-E604275 [74408]">
      <seq>tccccctgtgtctctctttccgtaatttagggtttgatcagcaccatggatgttgaggcagccgagttccaagagtgggagatgattccctcgaaccgggcatctaactcggaaccgttaactccggatggttcagccggaaacaccaacggtgtcgatgaagttggatctgagacgatcggtgtgattcaacccaattacttctctctagactctcaaatcaggtatatgggtacgttttctgcggatggaagcgaggaggactctgaaaaatcggataatccgagttggattgagcccgattctgaaaacaacgagtttaccatgaagaattctcgcgaattctggtcggattccagcagtgagggtaaaaatgaattgggttttgaagagatgaaaagtgaaaatggtgaagaatttaggccggattctgtgaaatttggtgctggagaaaatagtcatctgcaacaagtttctgttgaagaaaatcaggaaaaggaaaatggaaatgttgaaggtgaacagaggagggatgcaggggaccaaaagaagagcctagtgtggtggtggaaggtgccaatacatcttgtcaagtattgtgctgcttttagagttagccccgtgtggacattttctgctgctgctgctgctattatggcttttgttattttggttcgtaggttgtctaagatgaacgaaaaagaccaaggcattgaagctcaaactaactgtggatgacaggaatgtatctcagttcacaaaccgtgctgcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="63591" stop="62213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63291" g_stop="62513" g_length="779"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="773" r_length="773" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E604275" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>779</cumulative_length_of_scored_exons>
        <coverage percentage="1.008" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E604275" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63291" e_stop="62513"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCCTCTGTATCTCTCTTTTACGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGGCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACTCGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTTTCTCTAGACTCTCAAATCAGGTATATGAGTACGTTTTCTAAGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGATAACAACGAGTTTACCATGAAGAATTCTCGCGAATTATGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGCTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGTCTCTGTGGAATTTGGTGCTGGAGAAAATAGTCAGCTCCAACAAGTTTCTGTTGAAGAAAATCAGGAAAAGGAAAATGGAAATGTTGAAGGTGAAGGTGAACAGAGGAGGGATGCAGGGAACCAAAAGAAGAGCCTAGTGTGGTGGTGGAAGGTTCCAATACATCTTGTCAAGTATTGTGCTGCTTTTAGAGTTAGCCCTGTGTGGACATTTTCTGCTGCTGCTGCTGCTATTATGGCTTTCGTTATTTTGGTTCGTAGGTTATCTAAGATGAA-GAAAAACACCAAGGCATTGAAGCTCAAACTAACTGTGGATGACAAGAATGTATCTCAGTTCACAAACCGTGCTGCAC</genome_strand>
        <mrna_strand>TCCCCCTGTGTCTCTC-TTTCCGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGCCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTAACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACACCAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTCTCTCTAGACTCTCAAATCAGGTATATGGGTACGTTTTCTGCGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGAAAACAACGAGTTTACCATGAAGAATTCTCGCGAATTCTGGTCGGATTCCAGCAGTGAGGGTAAAAATGAATTGGGTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGATTCTGTGAAATTTGGTGCTGGAGAAAATAGTCATCTGCAACAAGTTTCTGTTGAAGAAAATCAGGAAAAGGAAAATGGAAATG-T-----TGAAGGTGAACAGAGGAGGGATGCAGGGGACCAAAAGAAGAGCCTAGTGTGGTGGTGGAAGGTGCCAATACATCTTGTCAAGTATTGTGCTGCTTTTAGAGTTAGCCCCGTGTGGACATTTTCTGCTGCTGCTGCTGCTATTATGGCTTTTGTTATTTTGGTTCGTAGGTTGTCTAAGATGAACGAAAAAGACCAAGGCATTGAAGCTCAAACTAACTGTGGATGACAGGAATGTATCTCAGTTCACAAACCGTGCTGCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E698008" ref_strand="+" ref_description="SGN-E698008 [FA04DH07]">
      <seq>ctctcttttacgtaatttagggtttgatcagcaccatggatgttgaggcaggcgagttccaagagtgggagatgattccctcgaaccgggcatctgactcggaaccgttaactccggatggttcagccggaaactcgaacggtgtcgatgaagttggatctgagacgatcggtgtgattcaacccaattacttttctctagactctcaaatcaggtatatgagtacgttttctaaggatggaagcgaggaggactctgaaaaatcggataatccgagttggattgagcccgattctgataacaacgagtttaccatgaagaattctcgcgaattatggtcggattccggcagtgagggtaaaaatgaattggcttttgaagagatgaaaagtgaaaatggtgaagaatttaggccggtctctgtggaatttggtgctggagaaaatagtcagctccaacaagtttctgttgaagaaaatcaggaaaaggaaaatggaaatgttgaaggtgaaggtgaacagaggagggatgcagggaaccaaaagaagagcctagtgtggtggtggaaggttccaatacatcttgtcaagtattgtgctgcttttagagttagccctgtgtggacattttctgctgctgctgctgctattatggctttcgttattttggttcgtaggttatctaagatgaagaaaaacaccaaggcattgaagctcaaactaactgtggatgacaagaatgtatctcagttcacaaaccgtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="63580" stop="62218"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63280" g_stop="62518" g_length="763"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="763" r_length="763" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E698008" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>763</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E698008" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63280" e_stop="62518"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTCTTTTACGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGGCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACTCGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTTTCTCTAGACTCTCAAATCAGGTATATGAGTACGTTTTCTAAGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGATAACAACGAGTTTACCATGAAGAATTCTCGCGAATTATGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGCTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGTCTCTGTGGAATTTGGTGCTGGAGAAAATAGTCAGCTCCAACAAGTTTCTGTTGAAGAAAATCAGGAAAAGGAAAATGGAAATGTTGAAGGTGAAGGTGAACAGAGGAGGGATGCAGGGAACCAAAAGAAGAGCCTAGTGTGGTGGTGGAAGGTTCCAATACATCTTGTCAAGTATTGTGCTGCTTTTAGAGTTAGCCCTGTGTGGACATTTTCTGCTGCTGCTGCTGCTATTATGGCTTTCGTTATTTTGGTTCGTAGGTTATCTAAGATGAAGAAAAACACCAAGGCATTGAAGCTCAAACTAACTGTGGATGACAAGAATGTATCTCAGTTCACAAACCGTGC</genome_strand>
        <mrna_strand>CTCTCTTTTACGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGGCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACTCGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTTTCTCTAGACTCTCAAATCAGGTATATGAGTACGTTTTCTAAGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGATAACAACGAGTTTACCATGAAGAATTCTCGCGAATTATGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGCTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGTCTCTGTGGAATTTGGTGCTGGAGAAAATAGTCAGCTCCAACAAGTTTCTGTTGAAGAAAATCAGGAAAAGGAAAATGGAAATGTTGAAGGTGAAGGTGAACAGAGGAGGGATGCAGGGAACCAAAAGAAGAGCCTAGTGTGGTGGTGGAAGGTTCCAATACATCTTGTCAAGTATTGTGCTGCTTTTAGAGTTAGCCCTGTGTGGACATTTTCTGCTGCTGCTGCTGCTATTATGGCTTTCGTTATTTTGGTTCGTAGGTTATCTAAGATGAAGAAAAACACCAAGGCATTGAAGCTCAAACTAACTGTGGATGACAAGAATGTATCTCAGTTCACAAACCGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E369580" ref_strand="+" ref_description="SGN-E369580 [TUS-25-L6](-)">
      <seq>gaaccaaaataacgaaagccataatagcagcagcagcagcagaaaatgtccacacagggctaactctaaaagcagcacaatacttgacaagatgtattggaaccttccaccaccacactaggctcttcttttggttccctgcatccctcctctgttcaccttcaccttcaacatttccattttccttttcctgattttcttcaacagaaacttgttggagctgactattttctccagcaccaaattccacagagaccggcctaaattcttcaccattttcacttttcatctcttcaaaagccaattcatttttaccctcactgccggaatccgaccataattcgcgagaattcttcatggtaaactcgttgttatcagaatcgggctcaatccaactcggattatccgatttttcagagtcctcctcgcttccatccttagaaaacgtactcatatacctgatttgagagtctagagaaaagtaattgggttgaatcacaccgatcgtctcagatccaacttcatcgacaccgttcgagtttccggctgaaccatccggagttaacggttccgagtcagatgcccggttcgagggaatcatctcccactcttggaactcgcctgcctcaacatccatggtgctgatcaaaccctaaattacgtaaaagagagatacagagggggggacaggttgggggagagaagaaataaggctcttatccattctcattgataaacctatttaatcaaattca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="62309" stop="63663"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62609" g_stop="63363" g_length="755"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="755" r_length="755" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E369580" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>755</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E369580" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62609" e_stop="63363"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACCAAAATAACGAAAGCCATAATAGCAGCAGCAGCAGCAGAAAATGTCCACACAGGGCTAACTCTAAAAGCAGCACAATACTTGACAAGATGTATTGGAACCTTCCACCACCACACTAGGCTCTTCTTTTGGTTCCCTGCATCCCTCCTCTGTTCACCTTCACCTTCAACATTTCCATTTTCCTTTTCCTGATTTTCTTCAACAGAAACTTGTTGGAGCTGACTATTTTCTCCAGCACCAAATTCCACAGAGACCGGCCTAAATTCTTCACCATTTTCACTTTTCATCTCTTCAAAAGCCAATTCATTTTTACCCTCACTGCCGGAATCCGACCATAATTCGCGAGAATTCTTCATGGTAAACTCGTTGTTATCAGAATCGGGCTCAATCCAACTCGGATTATCCGATTTTTCAGAGTCCTCCTCGCTTCCATCCTTAGAAAACGTACTCATATACCTGATTTGAGAGTCTAGAGAAAAGTAATTGGGTTGAATCACACCGATCGTCTCAGATCCAACTTCATCGACACCGTTCGAGTTTCCGGCTGAACCATCCGGAGTTAACGGTTCCGAGTCAGATGCCCGGTTCGAGGGAATCATCTCCCACTCTTGGAACTCGCCTGCCTCAACATCCATGGTGCTGATCAAACCCTAAATTACGTAAAAGAGAGATACAGAGGGGGGGACAGGTTGGGGGAGAGAAGAAATAAGGCTCTTATCCATTCTCATTGATAAACCTATTTAATCAAATTCA</genome_strand>
        <mrna_strand>GAACCAAAATAACGAAAGCCATAATAGCAGCAGCAGCAGCAGAAAATGTCCACACAGGGCTAACTCTAAAAGCAGCACAATACTTGACAAGATGTATTGGAACCTTCCACCACCACACTAGGCTCTTCTTTTGGTTCCCTGCATCCCTCCTCTGTTCACCTTCACCTTCAACATTTCCATTTTCCTTTTCCTGATTTTCTTCAACAGAAACTTGTTGGAGCTGACTATTTTCTCCAGCACCAAATTCCACAGAGACCGGCCTAAATTCTTCACCATTTTCACTTTTCATCTCTTCAAAAGCCAATTCATTTTTACCCTCACTGCCGGAATCCGACCATAATTCGCGAGAATTCTTCATGGTAAACTCGTTGTTATCAGAATCGGGCTCAATCCAACTCGGATTATCCGATTTTTCAGAGTCCTCCTCGCTTCCATCCTTAGAAAACGTACTCATATACCTGATTTGAGAGTCTAGAGAAAAGTAATTGGGTTGAATCACACCGATCGTCTCAGATCCAACTTCATCGACACCGTTCGAGTTTCCGGCTGAACCATCCGGAGTTAACGGTTCCGAGTCAGATGCCCGGTTCGAGGGAATCATCTCCCACTCTTGGAACTCGCCTGCCTCAACATCCATGGTGCTGATCAAACCCTAAATTACGTAAAAGAGAGATACAGAGGGGGGGACAGGTTGGGGGAGAGAAGAAATAAGGCTCTTATCCATTCTCATTGATAAACCTATTTAATCAAATTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E485621" ref_strand="+" ref_description="SGN-E485621 [cSTE-18-F18]">
      <seq>ccctgtgtctctctttccgtaatttagggtttgatcagcaccatggatgttgaggcagccgagttccaagagtgggagatgattccctcgaaccgggcatctaactcggaaccgttaactccggatggttcagccggaaacaccaacggtgtcgatgaagttggatctgagacgatcggtgtgattcaacccaattacttctctctagactctcaaatcaggtatatgggtacgttttctgcggatggaagcgaggaggactctgaaaaatcggataatccgagttggattgagcccgattctgaaaacaacgagtttaccatgaagaattctcgcgaattctggtcggattccagcagtgagggtaaaaatgaattgggttttgaagagatgaaaagtgaaaatggtgaagaatttaggccggattctgtgaaatttggtgctggagaaaatagtcatctgcaacaagtttctgttgaagaaaatcaggaaaaggaaaatggaaatgttgaaggtgaacagaggagggatgcaggggaccaaaagaagagcctagtgtggtggtggaaggtgccaatacatcttgtcaagtattgtgctgcttttagagttagccccgtgtggacattttctgctgctgctgctgctattatggcttttgntattttggttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="63589" stop="62309"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63288" g_stop="62609" g_length="680"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="673" r_length="673" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E485621" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E485621" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63288" e_stop="62609"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTGTATCTCTCTTTTACGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGGCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACTCGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTTTCTCTAGACTCTCAAATCAGGTATATGAGTACGTTTTCTAAGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGATAACAACGAGTTTACCATGAAGAATTCTCGCGAATTATGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGCTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGTCTCTGTGGAATTTGGTGCTGGAGAAAATAGTCAGCTCCAACAAGTTTCTGTTGAAGAAAATCAGGAAAAGGAAAATGGAAATGTTGAAGGTGAAGGTGAACAGAGGAGGGATGCAGGGAACCAAAAGAAGAGCCTAGTGTGGTGGTGGAAGGTTCCAATACATCTTGTCAAGTATTGTGCTGCTTTTAGAGTTAGCCCTGTGTGGACATTTTCTGCTGCTGCTGCTGCTATTATGGCTTTCGTTATTTTGGTTC</genome_strand>
        <mrna_strand>CCCTGTGTCTCTC-TTTCCGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGCCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTAACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACACCAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTCTCTCTAGACTCTCAAATCAGGTATATGGGTACGTTTTCTGCGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGAAAACAACGAGTTTACCATGAAGAATTCTCGCGAATTCTGGTCGGATTCCAGCAGTGAGGGTAAAAATGAATTGGGTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGATTCTGTGAAATTTGGTGCTGGAGAAAATAGTCATCTGCAACAAGTTTCTGTTGAAGAAAATCAGGAAAAGGAAAATGGAAATG-T-----TGAAGGTGAACAGAGGAGGGATGCAGGGGACCAAAAGAAGAGCCTAGTGTGGTGGTGGAAGGTGCCAATACATCTTGTCAAGTATTGTGCTGCTTTTAGAGTTAGCCCCGTGTGGACATTTTCTGCTGCTGCTGCTGCTATTATGGCTTTTGNTATTTTGGTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E484959" ref_strand="+" ref_description="SGN-E484959 [cSTE-16-A23]">
      <seq>ctctctttccgtaatttagggtttgatcagcaccatggacgttgaggcagccgagttccaagagtgggagatgattccctcgaaccgagcatctgactcggaaccgttaactccggatggttcagccggaaacaccaacggtgtcgatgaagttggatctgagacgatcggtgtgattcaacccaattacttctctctagactctcaaatcaggtatatgggtacgttttctgcggatggaagcgaggaggactctgaaaaatcggataatccgagttggattgagcccgattctgaaaacaacgagtttaccatgaagaattctcgcgaattctggtcggattccggcagtgagggtaaaaatgaattgggttttgaagagatgaaaagtgaaaatgatgaagaatttaggccggattctgtgaaatttggtgctggagaaaatagtcatctgcaacaagtttctgttgaagaaaatcaggaaaaggaaaatggaaatgttgaaggtgaacagaggagggatgcaggggaccaaaagaagagcctagtgtggtggtggaaggttccaatacatcttgtcaagtattgtgctgcttttagagttagccctgtgtggactttttctgctgctgctgctgctattatggcttttgttattttggttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="63580" stop="62309"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63280" g_stop="62609" g_length="672"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="665" r_length="665" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E484959" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>672</cumulative_length_of_scored_exons>
        <coverage percentage="1.011" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E484959" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63280" e_stop="62609"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTCTTTTACGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGGCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACTCGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTTTCTCTAGACTCTCAAATCAGGTATATGAGTACGTTTTCTAAGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGATAACAACGAGTTTACCATGAAGAATTCTCGCGAATTATGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGCTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGTCTCTGTGGAATTTGGTGCTGGAGAAAATAGTCAGCTCCAACAAGTTTCTGTTGAAGAAAATCAGGAAAAGGAAAATGGAAATGTTGAAGGTGAAGGTGAACAGAGGAGGGATGCAGGGAACCAAAAGAAGAGCCTAGTGTGGTGGTGGAAGGTTCCAATACATCTTGTCAAGTATTGTGCTGCTTTTAGAGTTAGCCCTGTGTGGACATTTTCTGCTGCTGCTGCTGCTATTATGGCTTTCGTTATTTTGGTTC</genome_strand>
        <mrna_strand>CTCTC-TTTCCGTAATTTAGGGTTTGATCAGCACCATGGACGTTGAGGCAGCCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGAGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACACCAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTCTCTCTAGACTCTCAAATCAGGTATATGGGTACGTTTTCTGCGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGAAAACAACGAGTTTACCATGAAGAATTCTCGCGAATTCTGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGGTTTTGAAGAGATGAAAAGTGAAAATGATGAAGAATTTAGGCCGGATTCTGTGAAATTTGGTGCTGGAGAAAATAGTCATCTGCAACAAGTTTCTGTTGAAGAAAATCAGGAAAAGGAAAATGGAAATG-T-----TGAAGGTGAACAGAGGAGGGATGCAGGGGACCAAAAGAAGAGCCTAGTGTGGTGGTGGAAGGTTCCAATACATCTTGTCAAGTATTGTGCTGCTTTTAGAGTTAGCCCTGTGTGGACTTTTTCTGCTGCTGCTGCTGCTATTATGGCTTTTGTTATTTTGGTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E723425" ref_strand="+" ref_description="SGN-E723425 [FC20BG10]">
      <seq>gggcgattggcggccaatcggccgaattgaaattaaataggtttacctttgagaatggataagagccttatttcttctctcccccaacctgtccccccctctgtatctctcttttacgtaatttagggtttgatcagcaccatggatgttgaggcaggcgagttccaagagtgggagatgattccctcgaaccgggcatctgactcggaaccgttaactccggatggttcagccggaaactcgaacggtgtcgatgaagttggatctgagacgatcggtgtgattcaacccaattacttttctctagactctcaaatcaggtatatgagtacgttttctaaggatggaagcgaggaggactctgaaaaatcggataatccgagttggattgagcccgattctgataacaacgagtttaccatgaagaattctcgcgaattatggtcggattccggcagtgagggtaaaaatgaattggcttttgaagagatgaaaagtgaaaatggtgaagaatttaggccggtctctgtggaatttggtgctggagaaaatagtcagctccaacaagtttctgttgaagaaaatcaggaaaaggaaaatggaaatgttgaaggtgaaggtgaacagaggagggatgcagggaaccaaaagaagagcctagtgtggtggtggaaggttccaatacatcttgtcaagtattgtgctgcttttagagttagccctgtgtggacattttctgctgctgctgctgctattatggctttcgttattttggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="63655" stop="62311"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63346" g_stop="62611" g_length="736"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="776" r_length="736" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E723425" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>736</cumulative_length_of_scored_exons>
        <coverage percentage="0.948" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E723425" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63346" e_stop="62611"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTATCAATGAGAATGGATAAGAGCCTTATTTCTTCTCTCCCCCAACCTGTCCCCCCCTCTGTATCTCTCTTTTACGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGGCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACTCGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTTTCTCTAGACTCTCAAATCAGGTATATGAGTACGTTTTCTAAGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGATAACAACGAGTTTACCATGAAGAATTCTCGCGAATTATGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGCTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGTCTCTGTGGAATTTGGTGCTGGAGAAAATAGTCAGCTCCAACAAGTTTCTGTTGAAGAAAATCAGGAAAAGGAAAATGGAAATGTTGAAGGTGAAGGTGAACAGAGGAGGGATGCAGGGAACCAAAAGAAGAGCCTAGTGTGGTGGTGGAAGGTTCCAATACATCTTGTCAAGTATTGTGCTGCTTTTAGAGTTAGCCCTGTGTGGACATTTTCTGCTGCTGCTGCTGCTATTATGGCTTTCGTTATTTTGGT</genome_strand>
        <mrna_strand>GTTTACCTTTGAGAATGGATAAGAGCCTTATTTCTTCTCTCCCCCAACCTGTCCCCCCCTCTGTATCTCTCTTTTACGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGGCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACTCGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTTTCTCTAGACTCTCAAATCAGGTATATGAGTACGTTTTCTAAGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGATAACAACGAGTTTACCATGAAGAATTCTCGCGAATTATGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGCTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGTCTCTGTGGAATTTGGTGCTGGAGAAAATAGTCAGCTCCAACAAGTTTCTGTTGAAGAAAATCAGGAAAAGGAAAATGGAAATGTTGAAGGTGAAGGTGAACAGAGGAGGGATGCAGGGAACCAAAAGAAGAGCCTAGTGTGGTGGTGGAAGGTTCCAATACATCTTGTCAAGTATTGTGCTGCTTTTAGAGTTAGCCCTGTGTGGACATTTTCTGCTGCTGCTGCTGCTATTATGGCTTTCGTTATTTTGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E468525" ref_strand="+" ref_description="SGN-E468525 [cSTB-5-G3]">
      <seq>cgtaatttagggtttgatcagcaccatggatgttgaggcagccgagttccaagagtgggagatgattccctcgacccgagcatctgactcggaaccgttaactccggatggttcagccggaaacaccaactgtgtcgatgaagttggatctgagacgatcggtgtgattcaacccaattacttctctctagactctcaaatcaggtatatgggtacgttttctgcggatggaagcgaggaggactctgaaaaatcggataatccgagttggattgagcccgattctgaaaacaacgagtttatcatgaagaattcttgcgaattctggtcggattccggcagtgagggtaaaaatgaattgggttttgaagagatgaaaagtgaaaatggtgaagaatttaggccggattctgtgaaatttggtgctggagaaaatagtcatctgcaacaagtttctgttgaagaaaatcaggaaaaggaaaatggaaatgttgaaggtgaacagaggagggatgcaggggaccaaaagaagagcctagtgtggtggtggaaggttccaatacatcttgtcaagtattgtgctgcttttagagttagccctgtgtggacattttctgctgctgctgctgctatcatggctttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="63570" stop="62323"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63270" g_stop="62622" g_length="649"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="643" r_length="643" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E468525" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>649</cumulative_length_of_scored_exons>
        <coverage percentage="1.009" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E468525" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63270" e_stop="62622"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGGCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACTCGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTTTCTCTAGACTCTCAAATCAGGTATATGAGTACGTTTTCTAAGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGATAACAACGAGTTTACCATGAAGAATTCTCGCGAATTATGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGCTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGTCTCTGTGGAATTTGGTGCTGGAGAAAATAGTCAGCTCCAACAAGTTTCTGTTGAAGAAAATCAGGAAAAGGAAAATGGAAATGTTGAAGGTGAAGGTGAACAGAGGAGGGATGCAGGGAACCAAAAGAAGAGCCTAGTGTGGTGGTGGAAGGTTCCAATACATCTTGTCAAGTATTGTGCTGCTTTTAGAGTTAGCCCTGTGTGGACATTTTCTGCTGCTGCTGCTGCTATTATGGCTTTC</genome_strand>
        <mrna_strand>CGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGCCGAGTTCCAAGAGTGGGAGATGATTCCCTCGACCCGAGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACACCAACTGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTCTCTCTAGACTCTCAAATCAGGTATATGGGTACGTTTTCTGCGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGAAAACAACGAGTTTATCATGAAGAATTCTTGCGAATTCTGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGGTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGATTCTGTGAAATTTGGTGCTGGAGAAAATAGTCATCTGCAACAAGTTTCTGTTGAAGAAAATCAGGAAAAGGAAAATGGAAATG-T-----TGAAGGTGAACAGAGGAGGGATGCAGGGGACCAAAAGAAGAGCCTAGTGTGGTGGTGGAAGGTTCCAATACATCTTGTCAAGTATTGTGCTGCTTTTAGAGTTAGCCCTGTGTGGACATTTTCTGCTGCTGCTGCTGCTATCATGGCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E558987" ref_strand="+" ref_description="SGN-E558987 [18413]">
      <seq>gtttgatcagcacatggatgttgaggcagccgagttccaatagtgggagatgattccctcggaaccgggcatctaactcggaaccgttaactccggatggttcagccggaaacaccaacggtgtcgatgaagttggatctgagacgatcggtgtgattcaacccaattacttctctctagactctcaaatcaggtatatgggtacgttttctgcggatggaagcgaggaggactctgaaaaatcggataatccgagttggattgagcccgattctgaaaacaacgagtttaccatgaagaattctcgcgaattctggtcggattccagcagtgagggtaaaaatgaattgggttttgaagagatgaaaagtgaaaatggtgaagaatttaggccggattctgtgaaatttggtgctggcagaaaatagtcatctgcaacaagtttctgttgaaggaaaatcaggaaaaggaaaatggaaatgttgaaggtgaacagaggagggatgcaggggaccaaaagaagagcctagtgtggtggtggaaggtgccaaatacatcttgtcaagtattgtgctgcttttagagttagccccgtgtggacatttttcttgctgctgctgctgctattatggct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="63559" stop="62325"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63259" g_stop="62625" g_length="635"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="634" r_length="634" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E558987" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>635</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E558987" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63259" e_stop="62625"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTGATCAGCACCATGGATGTTGAGGCAGGCGAGTTCCAAGAGTGGGAGATGATTCCCTC-GAACCGGGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACTCGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTTTCTCTAGACTCTCAAATCAGGTATATGAGTACGTTTTCTAAGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGATAACAACGAGTTTACCATGAAGAATTCTCGCGAATTATGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGCTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGTCTCTGTGGAATTTGGTGCTGG-AGAAAATAGTCAGCTCCAACAAGTTTCTGTTGAA-GAAAATCAGGAAAAGGAAAATGGAAATGTTGAAGGTGAAGGTGAACAGAGGAGGGATGCAGGGAACCAAAAGAAGAGCCTAGTGTGGTGGTGGAAGGTTCC-AATACATCTTGTCAAGTATTGTGCTGCTTTTAGAGTTAGCCCTGTGTGGACA-TTTTC-TGCTGCTGCTGCTGCTATTATGGCT</genome_strand>
        <mrna_strand>GTTTGATCAGCA-CATGGATGTTGAGGCAGCCGAGTTCCAATAGTGGGAGATGATTCCCTCGGAACCGGGCATCTAACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACACCAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTCTCTCTAGACTCTCAAATCAGGTATATGGGTACGTTTTCTGCGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGAAAACAACGAGTTTACCATGAAGAATTCTCGCGAATTCTGGTCGGATTCCAGCAGTGAGGGTAAAAATGAATTGGGTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGATTCTGTGAAATTTGGTGCTGGCAGAAAATAGTCATCTGCAACAAGTTTCTGTTGAAGGAAAATCAGGAAAAGGAAAATGGAAATG-T-----TGAAGGTGAACAGAGGAGGGATGCAGGGGACCAAAAGAAGAGCCTAGTGTGGTGGTGGAAGGTGCCAAATACATCTTGTCAAGTATTGTGCTGCTTTTAGAGTTAGCCCCGTGTGGACATTTTTCTTGCTGCTGCTGCTGCTATTATGGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E449095" ref_strand="+" ref_description="SGN-E449095 [cSTS-5-G24]">
      <seq>ccgtgtctctctttccgtaatttagggtttgatcagcaccatggatgttgaggcagccgagttccaagagtgggagatgattccctcgacccgagcatctgactcggaaccgttaactccggatggttcagccggaaacaccaactgtgtcgatgaagttggatctgagacgatcggtgtgattcaacccaattacttctctctagactctcaaatcaggtatatgggtacgttttctgcggatggaagcgaggaggactctgaaaaatcggataatccgagttggattgagcccgattctgaaaacaacgagtttatcatgaagaattcttgcgaattctggtcggattccggcagtgagggtaaaaatgaattgggttttgaagagatgaaaagtgaaaatggtgaagaatttaggccggattctgtgaaatttggtgctggagaaaatagtcatctgcaacaagtttctgttgaagaaaatcaggaaaaggaaaatggaaatgttgaaggtgaacagaggagggatgcaggggaccaaaagaagagcctagtgtggtggtggaaggttccaatacatcttgtcaagtattgtgctgcttttagagttagccctgtgtggacattttctgctgctgctgctgctatcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="63586" stop="62328"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63286" g_stop="62628" g_length="659"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="652" r_length="652" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E449095" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="1.011" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E449095" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63286" e_stop="62628"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTATCTCTCTTTTACGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGGCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACTCGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTTTCTCTAGACTCTCAAATCAGGTATATGAGTACGTTTTCTAAGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGATAACAACGAGTTTACCATGAAGAATTCTCGCGAATTATGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGCTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGTCTCTGTGGAATTTGGTGCTGGAGAAAATAGTCAGCTCCAACAAGTTTCTGTTGAAGAAAATCAGGAAAAGGAAAATGGAAATGTTGAAGGTGAAGGTGAACAGAGGAGGGATGCAGGGAACCAAAAGAAGAGCCTAGTGTGGTGGTGGAAGGTTCCAATACATCTTGTCAAGTATTGTGCTGCTTTTAGAGTTAGCCCTGTGTGGACATTTTCTGCTGCTGCTGCTGCTATTATG</genome_strand>
        <mrna_strand>CCGTGTCTCTC-TTTCCGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGCCGAGTTCCAAGAGTGGGAGATGATTCCCTCGACCCGAGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACACCAACTGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTCTCTCTAGACTCTCAAATCAGGTATATGGGTACGTTTTCTGCGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGAAAACAACGAGTTTATCATGAAGAATTCTTGCGAATTCTGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGGTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGATTCTGTGAAATTTGGTGCTGGAGAAAATAGTCATCTGCAACAAGTTTCTGTTGAAGAAAATCAGGAAAAGGAAAATGGAAATG-T-----TGAAGGTGAACAGAGGAGGGATGCAGGGGACCAAAAGAAGAGCCTAGTGTGGTGGTGGAAGGTTCCAATACATCTTGTCAAGTATTGTGCTGCTTTTAGAGTTAGCCCTGTGTGGACATTTTCTGCTGCTGCTGCTGCTATCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E567150" ref_strand="+" ref_description="SGN-E567150 [11230]">
      <seq>ctgtgtctctctttccgtaatttagggtttgatcagcaccatggatgttgaggcagccgagttccaagagtgggagatgattccctcgaaccgggcatctgactcggaaccgttaactccggatggttcagccggaaacatgaacggtgtcgatgaagttggatctgagacgatcggtgtgattcaacccaattacttctctctagactctcaaatcaggtatatgggtacgttttctgcggatggaagcgaggaggactctgaaaaatcggataatccgagttggattgagcccgattctgaaaacaacgagtttaccatgaagaattctcgtgaattctggtcggattccggcagtgagggtaaaaatgaattgggttttgaagagatgaaaagtgaaaatggtgaagaatttaggccggattctgtgaaatttggtgctggagaaaatagtcgtctgcaacaagtttcagttgaagaaaatcaggaaaaggaaaatggcaaatgttgaaggtgaaggtgaacagaggagggatgcaggggaccaaaagaagagcctagtgtggtggtggaaggttccaatacatcttgtcaagtattgtgctgcttttagagttagccctgtgtggacattttctgctgctgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="63586" stop="62339"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63286" g_stop="62639" g_length="648"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="648" r_length="648" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E567150" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>648</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E567150" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63286" e_stop="62639"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTATCTCTCTTTTACGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGGCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACTCGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTTTCTCTAGACTCTCAAATCAGGTATATGAGTACGTTTTCTAAGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGATAACAACGAGTTTACCATGAAGAATTCTCGCGAATTATGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGCTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGTCTCTGTGGAATTTGGTGCTGGAGAAAATAGTCAGCTCCAACAAGTTTCTGTTGAAGAAAATCAGGAAAAGGAAAATGG-AAATGTTGAAGGTGAAGGTGAACAGAGGAGGGATGCAGGGAACCAAAAGAAGAGCCTAGTGTGGTGGTGGAAGGTTCCAATACATCTTGTCAAGTATTGTGCTGCTTTTAGAGTTAGCCCTGTGTGGACATTTTCTGCTGCTGCTG</genome_strand>
        <mrna_strand>CTGTGTCTCTC-TTTCCGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGCCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACATGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTCTCTCTAGACTCTCAAATCAGGTATATGGGTACGTTTTCTGCGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGAAAACAACGAGTTTACCATGAAGAATTCTCGTGAATTCTGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGGTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGATTCTGTGAAATTTGGTGCTGGAGAAAATAGTCGTCTGCAACAAGTTTCAGTTGAAGAAAATCAGGAAAAGGAAAATGGCAAATGTTGAAGGTGAAGGTGAACAGAGGAGGGATGCAGGGGACCAAAAGAAGAGCCTAGTGTGGTGGTGGAAGGTTCCAATACATCTTGTCAAGTATTGTGCTGCTTTTAGAGTTAGCCCTGTGTGGACATTTTCTGCTGCTGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E592473" ref_strand="+" ref_description="SGN-E592473 [46208]">
      <seq>ttcttttctcccccaacctgtccccctgtgtctctctttccgtaatttagggtttgatcagcaccatggacgttgaggcagccgagttccaagagtgggagatgattccctcgaaccgagcatctgactcggaaccgttaactccggatggttcagccggaaacaccaacggtgtcgatgaagttggatctgagacgatcggtgtgattcaacccaattacttctctctagactctcaaatcaggtatatgggtacgttttctgcggatggaagcgaggaggactctgaaaaatcggataatccgagttggattgagcccgattctgaaaacaacgagtttaccatgaagaattctcgcgaattctggtcggattccggcagtgagggtaaaaatgaattgggttttgaagagatgaaaagtgaaaatgatgaagaatttaggccggattctgtgaaatttggtgctggagaaaatagtcatctgcaacaagtttctgttgaagaaaatcaggaaaaggaaaatggaaatgttgaaggtgaacagaggagggatgcaggggaccaaaagaagagcctagtgtggtggtggaaggttccaatacatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="63591" stop="62399"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63315" g_stop="62699" g_length="617"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="606" r_length="606" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E592473" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>617</cumulative_length_of_scored_exons>
        <coverage percentage="1.018" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E592473" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63315" e_stop="62699"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTCTCTCCCCCAACCTGTCCCCCCCTCTGTATCTCTCTTTTACGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGGCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACTCGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTTTCTCTAGACTCTCAAATCAGGTATATGAGTACGTTTTCTAAGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGATAACAACGAGTTTACCATGAAGAATTCTCGCGAATTATGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGCTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGTCTCTGTGGAATTTGGTGCTGGAGAAAATAGTCAGCTCCAACAAGTTTCTGTTGAAGAAAATCAGGAAAAGGAAAATGGAAATGTTGAAGGTGAAGGTGAACAGAGGAGGGATGCAGGGAACCAAAAGAAGAGCCTAGTGTGGTGGTGGAAGGTTCCAATACATC</genome_strand>
        <mrna_strand>TTCTTTTCTCCCCCAACCTGT---CCCC-CTGTGTCTCTC-TTTCCGTAATTTAGGGTTTGATCAGCACCATGGACGTTGAGGCAGCCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGAGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACACCAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTCTCTCTAGACTCTCAAATCAGGTATATGGGTACGTTTTCTGCGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGAAAACAACGAGTTTACCATGAAGAATTCTCGCGAATTCTGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGGTTTTGAAGAGATGAAAAGTGAAAATGATGAAGAATTTAGGCCGGATTCTGTGAAATTTGGTGCTGGAGAAAATAGTCATCTGCAACAAGTTTCTGTTGAAGAAAATCAGGAAAAGGAAAATGGAAATG-T-----TGAAGGTGAACAGAGGAGGGATGCAGGGGACCAAAAGAAGAGCCTAGTGTGGTGGTGGAAGGTTCCAATACATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E579426" ref_strand="+" ref_description="SGN-E579426 [86554]">
      <seq>gtctctctttccgtaatttagggtttgatcagcaccatggatgttgaggcagccgagttccaagagtgggagatgattccctcgaaccgggcatctgactcggaaccgttaactccggatggttcagccggaaacatgaacggtgtcgatgaagttggatctgagacgatcggtgtgattcaacccaattacttctctctagactctcaaatcaggtatatgggtacgttttctgcggatggaagcgaggaggactctgaaaaatcggataatccgagttggattgagcccgattctgaaaacaacgagtttaccatgaagaattctcgtgaattctggtcggattccggcagtgagggtaaaaatgaattgggttttgaagagatgaaaagtgaaaatggtgaagaatttaggccggattctgtgaaatttggtgctggagaaaatagtcgtctgcaacaagtttcagttgaagaaaaatcaggaaaaggaaaatggaaatgttgaaggtgaaggtgaacagaggagggatgcaggggaccaaaaagaagagcctaantgtggtggttggaaggtttccaatacatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="63581" stop="62427"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63282" g_stop="62699" g_length="584"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="588" r_length="588" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E579426" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>584</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E579426" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63282" e_stop="62699"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTCTCTTTTACGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGGCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACTCGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTTTCTCTAGACTCTCAAATCAGGTATATGAGTACGTTTTCTAAGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGATAACAACGAGTTTACCATGAAGAATTCTCGCGAATTATGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGCTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGTCTCTGTGGAATTTGGTGCTGGAGAAAATAGTCAGCTCCAACAAGTTTCTGTTGAAG-AAAATCAGGAAAAGGAAAATGGAAATGTTGAAGGTGAAGGTGAACAGAGGAGGGATGCAGGGAACC-AAAAGAAGAGCCT-AGTGTGGTGG-TGGAAGG-TTCCAATACATC</genome_strand>
        <mrna_strand>GTCTCTCT-TTCCGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGCCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACATGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTCTCTCTAGACTCTCAAATCAGGTATATGGGTACGTTTTCTGCGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGAAAACAACGAGTTTACCATGAAGAATTCTCGTGAATTCTGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGGTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGATTCTGTGAAATTTGGTGCTGGAGAAAATAGTCGTCTGCAACAAGTTTCAGTTGAAGAAAAATCAGGAAAAGGAAAATGGAAATGTTGAAGGTGAAGGTGAACAGAGGAGGGATGCAGGGGACCAAAAAGAAGAGCCTAANTGTGGTGGTTGGAAGGTTTCCAATACATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E557554" ref_strand="+" ref_description="SGN-E557554 [16372]">
      <seq>cgtaatttagggtttgatcagcaccatggatgttgaggcagccgagttccaagagtgggagatgataccctcgaaccgggcatctgactcggaaccgttaactccggatggttcagccggaaacatgaacggtgtcgatgaagttggatctgagacgatcggtgtgattcaacccaattacttctctctagactctcaaatcaggtatatgggtacgttttctgcggatggaagcgaggaggactctgaaaaatcggataatccgagttggattgagcccgattctgaaaacaacgagtttaccatgaagaattctcgtgaattctggtcggattccggcagtgagggtaaaaatgaattgggttttgaagagatgaaaagtgaaaatggtgaagaatttaggccggattctgtgaaatctggtgctggagaaaatagtcgtctgcaacaagtttcagttgaagaaaatcaggaacaaggacaatggaaatgttgaaggtgaaggtgaacagaggagggatgcaggggaccaaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="63570" stop="62436"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63270" g_stop="62736" g_length="535"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="536" r_length="536" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E557554" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>535</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E557554" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63270" e_stop="62736"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGGCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACTCGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTTTCTCTAGACTCTCAAATCAGGTATATGAGTACGTTTTCTAAGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGATAACAACGAGTTTACCATGAAGAATTCTCGCGAATTATGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGCTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGTCTCTGTGGAATTTGGTGCTGGAGAAAATAGTCAGCTCCAACAAGTTTCTGTTGAAGAAAATCAGGAA-AAGGAAAATGGAAATGTTGAAGGTGAAGGTGAACAGAGGAGGGATGCAGGGAACCAAAAG</genome_strand>
        <mrna_strand>CGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGCCGAGTTCCAAGAGTGGGAGATGATACCCTCGAACCGGGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACATGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTCTCTCTAGACTCTCAAATCAGGTATATGGGTACGTTTTCTGCGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGAAAACAACGAGTTTACCATGAAGAATTCTCGTGAATTCTGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGGTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGATTCTGTGAAATCTGGTGCTGGAGAAAATAGTCGTCTGCAACAAGTTTCAGTTGAAGAAAATCAGGAACAAGGACAATGGAAATGTTGAAGGTGAAGGTGAACAGAGGAGGGATGCAGGGGACCAAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E582171" ref_strand="+" ref_description="SGN-E582171 [7804]">
      <seq>cgtaatttagggtttgatcagcaccatggatgttgaggcagccgagttccaagagtgggagatgattccctcgaaccgggcatctaactcggaaccgttaactccgtgatggttcatccggaaacaccaacggtgtcgatgaagttggatctgagacgatcggtgtgattcaacccaattacttctctctagactctcaaatcaggtatatgggtacgttttctgcggatggaagcgaggaggactctgaaaaatcggataatccgagttggattgagcccgattctgaaaacaacgagtttaccatgaagaattctcgcgaattctggtcggattccagcagtgagggtaaaaatgaatcgggtttagaagagatgaaaagtgaaaatggtgaagaatttatgccggattctgtgaaatttggtgctggagaacatagtcatctgcaacaagtttctgttgaagaaaatcatgaggcggaacatggacatgtggaaggtgaccaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="63570" stop="62497"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63270" g_stop="62764" g_length="507"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="507" r_length="507" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E582171" ref_strand="+">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>507</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E582171" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63270" e_stop="62764"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGGCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTGACTCGGAACCGTTAACTCCG-GATGGTTCAGCCGGAAACTCGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTTTCTCTAGACTCTCAAATCAGGTATATGAGTACGTTTTCTAAGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGATAACAACGAGTTTACCATGAAGAATTCTCGCGAATTATGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGCTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGTCTCTGTGGAATTTGGTGCTGGAGAAAATAGTCAGCTCCAACAAGTTTCTGTTGAAGAAAATCAGGAAAAGGAAAATGGAAATGTTGAAGGTGAAGGTGA</genome_strand>
        <mrna_strand>CGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGCCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTAACTCGGAACCGTTAACTCCGTGATGGTTCATCCGGAAACACCAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTCTCTCTAGACTCTCAAATCAGGTATATGGGTACGTTTTCTGCGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGAAAACAACGAGTTTACCATGAAGAATTCTCGCGAATTCTGGTCGGATTCCAGCAGTGAGGGTAAAAATGAATCGGGTTTAGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTATGCCGGATTCTGTGAAATTTGGTGCTGGAGAACATAGTCATCTGCAACAAGTTTCTGTTGAAGAAAATCATGAGGCGGAACATGGACATGTGGAAGGTG-ACCAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E447158" ref_strand="+" ref_description="SGN-E447158 [cSTA-25-E15]">
      <seq>gcatctgactcggaaccgttaactccggatggttcagccggaaacaccaacggtgtcgatgaagttggatctgagacgatcggtgtgattcaacccaattacttctctctagactctcaaatcaggtatatgggtacgttttctgcggatggaagcgaggaggactctgaaaaatcggataatccgagttggattgagcccgattctgaaaacaacgagtttaccatgaagaattctcgcgaattctggtcggattccggcagtgagggtaaaaatgaattgggttttgaagagatgaaaagtgaaaatgatgaagaatttaggccggattctgtgaaatttggtgctggagaaaatagtcatctgcaacaagtttctgttgaagaaaatcaggaaaaggaaaatggaaatgttgaaggtgaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="63491" stop="62469"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63191" g_stop="62768" g_length="424"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="424" r_length="424" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E447158" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>424</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E447158" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63191" e_stop="62768"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACTCGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTTTCTCTAGACTCTCAAATCAGGTATATGAGTACGTTTTCTAAGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGATAACAACGAGTTTACCATGAAGAATTCTCGCGAATTATGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGCTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGTCTCTGTGGAATTTGGTGCTGGAGAAAATAGTCAGCTCCAACAAGTTTCTGTTGAAGAAAATCAGGAAAAGGAAAATGGAAATGTTGAAGGTGAAG</genome_strand>
        <mrna_strand>GCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACACCAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTCTCTCTAGACTCTCAAATCAGGTATATGGGTACGTTTTCTGCGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGAAAACAACGAGTTTACCATGAAGAATTCTCGCGAATTCTGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGGTTTTGAAGAGATGAAAAGTGAAAATGATGAAGAATTTAGGCCGGATTCTGTGAAATTTGGTGCTGGAGAAAATAGTCATCTGCAACAAGTTTCTGTTGAAGAAAATCAGGAAAAGGAAAATGGAAATGTTGAAGGTGAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E486917" ref_strand="+" ref_description="SGN-E486917 [cSTE-23-L13]">
      <seq>ggtttgatcagcaccatggacgttgaggcagccgagttccaagagtgggagatgattccctcgaaccgagcatctgactcggaaccgttaactccggatggttcagccggaaacaccaacggtgtcgatgaagttggatctgagacgatcggtgtgattcaacccaattacttctctctagactctcaaatcaggtatatgggtacgttttctgcggatggaagcgaggaggactctgaaaaatcggataatccgagttggattgagcccgattctgaaaacaacgagtttaccatgaagaattctcgcgaattctggtcggattccggcagtgagggtaaaaatgaattgggttttgaagagatgaaaagtgaaaatgatgaagaatttaggccggattctgtgaaatttggtgctggagaaaatagtcatctgcaacaagtttctgttgaagaaaatcaggaaaagggaaatggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="63560" stop="62483"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63260" g_stop="62783" g_length="478"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="478" r_length="478" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E486917" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>478</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E486917" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63260" e_stop="62783"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTTGATCAGCACCATGGATGTTGAGGCAGGCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACTCGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTTTCTCTAGACTCTCAAATCAGGTATATGAGTACGTTTTCTAAGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGATAACAACGAGTTTACCATGAAGAATTCTCGCGAATTATGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGCTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGTCTCTGTGGAATTTGGTGCTGGAGAAAATAGTCAGCTCCAACAAGTTTCTGTTGAAGAAAATCAGGAAAAGGAAAATGGAA</genome_strand>
        <mrna_strand>GGTTTGATCAGCACCATGGACGTTGAGGCAGCCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGAGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACACCAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTCTCTCTAGACTCTCAAATCAGGTATATGGGTACGTTTTCTGCGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGAAAACAACGAGTTTACCATGAAGAATTCTCGCGAATTCTGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGGTTTTGAAGAGATGAAAAGTGAAAATGATGAAGAATTTAGGCCGGATTCTGTGAAATTTGGTGCTGGAGAAAATAGTCATCTGCAACAAGTTTCTGTTGAAGAAAATCAGGAAAAGGGAAATGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E483925" ref_strand="+" ref_description="SGN-E483925 [cSTE-11-M18]">
      <seq>ggtttgatcagcaccatggacgttgaggcagccgagttccaagagtgggagatgattccctcgaaccgagcatctgactcggaaccgttaactccggatggttcagccggaaacaccaacggtgtcgatgaagttggatctgagacgatcggtgtgattcaacccaattacttctctctagactctcaaatcaggtatatgggtacgttttctgcggatggaagcgaggaggactctgaaaaatcggataatccgagttggattgagcccgattctgaaaacaacgagtttaccatgaagaattctcgcgaattctggtcggattccggcagtgagggtaaaaatgaattgggttttgaagagatgaaaagtgaaaatgatgaagaatttaggccggattctgtgnaatttggtgctggagaaaatagtcatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="63560" stop="62527"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63260" g_stop="62827" g_length="434"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="434" r_length="434" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E483925" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>434</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E483925" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63260" e_stop="62827"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTTGATCAGCACCATGGATGTTGAGGCAGGCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACTCGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTTTCTCTAGACTCTCAAATCAGGTATATGAGTACGTTTTCTAAGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGATAACAACGAGTTTACCATGAAGAATTCTCGCGAATTATGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGCTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGTCTCTGTGGAATTTGGTGCTGGAGAAAATAGTCAGCT</genome_strand>
        <mrna_strand>GGTTTGATCAGCACCATGGACGTTGAGGCAGCCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGAGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACACCAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTCTCTCTAGACTCTCAAATCAGGTATATGGGTACGTTTTCTGCGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGAAAACAACGAGTTTACCATGAAGAATTCTCGCGAATTCTGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGGTTTTGAAGAGATGAAAAGTGAAAATGATGAAGAATTTAGGCCGGATTCTGTGNAATTTGGTGCTGGAGAAAATAGTCATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E481871" ref_strand="+" ref_description="SGN-E481871 [cSTD-19-L6]">
      <seq>ctgtgtctctctttccgtaatttagggtttgatcagcaccatggatgttgaggcagccgagttccaagagtgggagatgattccctcgaaccgggcatctgactcggaaccgttaactccggatggttcagccggaaacatgaacggtgtcgatgaagttggatctgagacgatcggtgtgattcaacccaattacttctctctagactctcaaatcaggtatatgggtacgttttctgcggatggaagcgaggaggactctgaaaaatcggataatccgagttggattgagcccgattctgaaaacaacgagtttaccatgaagaattctcgtgaattctggtcggattccggcagtgagggtaaaaatgaattgggttttgaagagatgaaaagtgaaaatggtgaagaatttaggccggattctgtgaaatttggtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="63586" stop="62546"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63286" g_stop="62846" g_length="441"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="440" r_length="440" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E481871" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>441</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E481871" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63286" e_stop="62846"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTATCTCTCTTTTACGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGGCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACTCGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTTTCTCTAGACTCTCAAATCAGGTATATGAGTACGTTTTCTAAGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGATAACAACGAGTTTACCATGAAGAATTCTCGCGAATTATGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGCTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGTCTCTGTGGAATTTGGTG</genome_strand>
        <mrna_strand>CTGTGTCTCTC-TTTCCGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGCCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACATGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTCTCTCTAGACTCTCAAATCAGGTATATGGGTACGTTTTCTGCGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGAAAACAACGAGTTTACCATGAAGAATTCTCGTGAATTCTGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGGTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGATTCTGTGAAATTTGGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E566986" ref_strand="+" ref_description="SGN-E566986 [11041]">
      <seq>ctgtccccctgtgtctctctttccgtaatttagggtttgatcagcaccatggatgttgaggcagccgagttccaagagtgggagatgattccctcgaaccgggcatctaactcggaaccgttaactccgggatggttcagccggaaacaccaacggtgtcgatgaagttggatctgagacgatcggtgtgattcaacccaattacttctctctagactctcaaatcaggtatatgggtacgttttctgcggatggaagcgaggaggactctgaaaaatcggataatccgagttggattgagcccgattctgaaaacaacgagtttaccatgaagaattctcgcgaattctggtcggattccagcagtgagggtaacaatgaattgcggtcttgaagagatgaacagtgaaaatggtgaagaattttaggcgggattctgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="63591" stop="62557"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63294" g_stop="62857" g_length="438"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="440" r_length="440" r_score="0.929"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E566986" ref_strand="+">
        <total_alignment_score>0.929</total_alignment_score>
        <cumulative_length_of_scored_exons>438</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E566986" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63294" e_stop="62857"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCCCCCTCTGTATCTCTCTTTTACGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGGCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTGACTCGGAACCGTTAACTCC-GGATGGTTCAGCCGGAAACTCGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTTTCTCTAGACTCTCAAATCAGGTATATGAGTACGTTTTCTAAGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGATAACAACGAGTTTACCATGAAGAATTCTCGCGAATTATGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTG-GCTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAA-TTTAGGCCGGTCTCTGT</genome_strand>
        <mrna_strand>CTGTCCCCCTGTGTCTCTCT-TTCCGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGCCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTAACTCGGAACCGTTAACTCCGGGATGGTTCAGCCGGAAACACCAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTCTCTCTAGACTCTCAAATCAGGTATATGGGTACGTTTTCTGCGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGAAAACAACGAGTTTACCATGAAGAATTCTCGCGAATTCTGGTCGGATTCCAGCAGTGAGGGTAACAATGAATTGCGGTCTTGAAGAGATGAACAGTGAAAATGGTGAAGAATTTTAGGCGGGATTCTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E268334" ref_strand="+" ref_description="SGN-E268334 [cLEI-13-G9]">
      <seq>ggataagagccttatttcttctctcccccaacctgtccccccctctgtatctctcttttacgtaatttagggtttgatcagcaccatggatgttgaggcaggcgagttccaagagtgggagatgattccctcgaaccgggcatctgactcggaaccgttaactccggatggttcagccggaaactcgaacggtgtcgatgaagttggatctgagacgatcggtgtgattcaacccaattacttttctctagactctcaaatcaggtatatgagtacgttttctaaggatggaagcgaggaggactctgaaaaatcggataatccgagttggattgagcccgattctgataacaacgagtttaccatgaagaattctcgcgaattatggtcggattccggcagtgagggtaaaaatgaattggcttttgaagagatgaaaagtgaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="63630" stop="62583"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63330" g_stop="62883" g_length="448"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="448" r_length="448" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E268334" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>448</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E268334" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63330" e_stop="62883"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATAAGAGCCTTATTTCTTCTCTCCCCCAACCTGTCCCCCCCTCTGTATCTCTCTTTTACGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGGCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACTCGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTTTCTCTAGACTCTCAAATCAGGTATATGAGTACGTTTTCTAAGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGATAACAACGAGTTTACCATGAAGAATTCTCGCGAATTATGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGCTTTTGAAGAGATGAAAAGTGAAAAT</genome_strand>
        <mrna_strand>GGATAAGAGCCTTATTTCTTCTCTCCCCCAACCTGTCCCCCCCTCTGTATCTCTCTTTTACGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGGCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACTCGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTTTCTCTAGACTCTCAAATCAGGTATATGAGTACGTTTTCTAAGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGATAACAACGAGTTTACCATGAAGAATTCTCGCGAATTATGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGCTTTTGAAGAGATGAAAAGTGAAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E409456" ref_strand="+" ref_description="SGN-E409456 [PPI-14-K1]">
      <seq>ctgtgtctctctttccgtaatttagggtttgatcagcaccatggatgttgaggcagccgagttccaagagtgggagatgattccctcgaaccgggcatctgactcggaaccgttaactccggatggttcagccggaaacatgaacggtgtcgatgaagttggatctgagacgatcggtgtgattcaacccaattacttctctctagactctcaaatcaggtatatgggtacgttttctgcggatggaagcgaggaggactctgaaaaatcggataatccgagttggattgagcccgattctgaaaacaacgagtttaccatgaagaattctcgtgaattctggtcggattccggcagtgagggtaaaaatgaattgggttttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="63586" stop="62603"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63286" g_stop="62903" g_length="384"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="383" r_length="383" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E409456" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>384</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E409456" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63286" e_stop="62903"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTATCTCTCTTTTACGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGGCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACTCGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTTTCTCTAGACTCTCAAATCAGGTATATGAGTACGTTTTCTAAGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGATAACAACGAGTTTACCATGAAGAATTCTCGCGAATTATGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGCTTTTG</genome_strand>
        <mrna_strand>CTGTGTCTCTC-TTTCCGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGCCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACATGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTCTCTCTAGACTCTCAAATCAGGTATATGGGTACGTTTTCTGCGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGAAAACAACGAGTTTACCATGAAGAATTCTCGTGAATTCTGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGGTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E710762" ref_strand="+" ref_description="SGN-E710762 [FA56CE12]">
      <seq>gatgttgaggcaggcgagcttccaagagtgggagatgattccctccaaccgggcatctgactcggaaccgttaactccggatggttcagccggaaactcgaacggcgtccatgaagttggatctgagacgatcggtgtgattcaacccaattacttttctctagactctcaaatcaggtatatgagtaccttttctacacgatggaagcgaggaggactccgaaaaatccgatcaatccgagctggattgagcccgattctgataaccacgagctcaccatgaagaattctcgcgaattatggacggattccggcagtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="63542" stop="62627"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63242" g_stop="62927" g_length="316"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="319" r_length="319" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E710762" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>316</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E710762" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63242" e_stop="62927"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGTTGAGGCAGGCGAG-TTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACTCGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTTTCTCTAGACTCTCAAATCAGGTATATGAGTACGTTTTCTA-AGGATGGAAGCGAGGAGGACTCTGAAAAATCGGAT-AATCCGAGTTGGATTGAGCCCGATTCTGATAACAACGAGTTTACCATGAAGAATTCTCGCGAATTATGGTCGGATTCCGGCAGTG</genome_strand>
        <mrna_strand>GATGTTGAGGCAGGCGAGCTTCCAAGAGTGGGAGATGATTCCCTCCAACCGGGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACTCGAACGGCGTCCATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTTTCTCTAGACTCTCAAATCAGGTATATGAGTACCTTTTCTACACGATGGAAGCGAGGAGGACTCCGAAAAATCCGATCAATCCGAGCTGGATTGAGCCCGATTCTGATAACCACGAGCTCACCATGAAGAATTCTCGCGAATTATGGACGGATTCCGGCAGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E484679" ref_strand="+" ref_description="SGN-E484679 [cSTE-14-G6]">
      <seq>ggtttgatcagcaccatggacgttgaggcagccgagttccaagagtgggagatgattccctcgaaccgagcatctgactcggaaccgttaactccggatggttcagccggaaacaccaacggtgtcgatgaagttggatctgagacgatcggtgtgattcaacccaattacttctctctagactctcaaatcaggtatatgggtacgttttctgcggatggaagcgaggaggactctgaaaaatcggattatccgagttggattgagcccgattctgaaaacaacg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="63560" stop="62675"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63260" g_stop="62975" g_length="286"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="286" r_length="286" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E484679" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>286</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E484679" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63260" e_stop="62975"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTTGATCAGCACCATGGATGTTGAGGCAGGCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACTCGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTTTCTCTAGACTCTCAAATCAGGTATATGAGTACGTTTTCTAAGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGATAACAACG</genome_strand>
        <mrna_strand>GGTTTGATCAGCACCATGGACGTTGAGGCAGCCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGAGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACACCAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTCTCTCTAGACTCTCAAATCAGGTATATGGGTACGTTTTCTGCGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATTATCCGAGTTGGATTGAGCCCGATTCTGAAAACAACG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E351274" ref_strand="-" ref_description="SGN-E351274 [cTOS-6-N7]">
      <seq>aaaagttatgcagaaattactgcgtcgttgggtgtagataatccatcagagattttgtttgtgacagatgtctatcaagaagccacagctgcaaaggcagcaggtttggaagtgataatctctatcagaccaggaaacggacctcttccagatagtcacgagttcaggacagtcaaatcattttcggagatctaaagatgggatgtgtcatgtattgtgtaacattaacttaataaaagtaggttgggagttgattcatcgtcgaaaaagttgagccaaatgagtctcatactgcagctcttatcttcatgatagtgttagtcttctttttcttgttgtattgagatgtaatagttttttttatctttgtgagaactattgttggtgattgatgttttcattgttccattttcaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="65036" stop="18127"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64736" g_stop="64634" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="103" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64633" i_stop="64233" i_length="401">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.915" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64232" g_stop="63919" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="104" r_stop="417" r_length="314" r_score="0.997"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63918" i_stop="63857" i_length="62">
            <donor d_prob="0.900" d_score="0.98"/>
            <acceptor a_prob="0.956" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63856" g_stop="63839" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="418" r_stop="435" r_length="18" r_score="0.389"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E351274" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>435</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E351274" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="64736" e_stop="64634"/>
          <exon e_start="64232" e_stop="63919"/>
          <exon e_start="63856" e_stop="63839"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGTTATGCAGAAATTACTGCGTCGTTGGGTGTAGATAATCCATCAGAGATTTTGTTTGTGACAGATGTCTATCAAGAAGCCACAGCTGCAAAGGCAGCAGGTAACATCCTGGTCATTTTGTATGAAAACAACTCTATATATGATATTTGCTAGCTTTCTCACTCTTCAATGAAACCAAATACTAGCTAAAAAAGTAGGTCGGTATTTAAGTGGAGAAAGAAAGAGAGACGTGTGCATTATCCACCGACTCCGAGTTTCAAACCATATGCCAATGCCTTGGGGGATTTCTCGGTTATTAAAAAAAAAAGTAGCTCGGCCAACAACTGTGTTGCCAATTTAGGATGTTAGAACGTCCATTTTTTTGTGTGATTCCTCCTCCCAATCCCAACAACTAGGAGCTCATCTAGACAAATTTGTGCGGCTGGAGCCTGTGTGATGTTTCTTATACTAAAAGCTATACTTCACTTTAAACTGACATTGTTGCCCTTTCTCCTCCTTCAGGTTTGGAAGTGATAATCTCTATCAGACCAGGAAACGGACCTCTTCCAGATAGTCACGAGTTCAGGACAGTCAAATCATTTTCGGAGATCTAAAGATGGGATGTGTCATGTATTGTGTAACATTAACTTAATAAAAGTAGGTTGGGAGTTGATTCATCGTCGAAAAAGTTGAGCCAAATGAGTCTCATACTGCAGCTCTTATCTTCATGATAGTGTTAGTCTTCTTTTTCTTGTTGTATTGAGATGTAATAGTTTTTTTTATCTTTGTGAGAACTATTGTTGGTGATTGATGTTTTCATTGTTCCATTTTCAAAGGCATGGCTCTTTTCTAAATGAGGTATAGCTTGCTTGATTTCTATTCATCCAATATATATCAGATCAAATGGAAACTCGCG</genome_strand>
        <mrna_strand>AAAAGTTATGCAGAAATTACTGCGTCGTTGGGTGTAGATAATCCATCAGAGATTTTGTTTGTGACAGATGTCTATCAAGAAGCCACAGCTGCAAAGGCAGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGAAGTGATAATCTCTATCAGACCAGGAAACGGACCTCTTCCAGATAGTCACGAGTTCAGGACAGTCAAATCATTTTCGGAGATCTAAAGATGGGATGTGTCATGTATTGTGTAACATTAACTTAATAAAAGTAGGTTGGGAGTTGATTCATCGTCGAAAAAGTTGAGCCAAATGAGTCTCATACTGCAGCTCTTATCTTCATGATAGTGTTAGTCTTCTTTTTCTTGTTGTATTGAGATGTAATAGTTTTTTTTATCTTTGTGAGAACTATTGTTGGTGATTGATGTTTTCATTGTTCCATTTTCAAAA..............................................................AAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E455616" ref_strand="+" ref_description="SGN-E455616 [cSTS-26-F18]">
      <seq>gttttggatatcgaaggaaccactaccccaatatcatttgttactgatgttctattcccttatgcacgtaataatgttgggagacatttggatgcaacatatgattcagcagaaactcaacaggatattaagttattacgtgctcaagtgcaacaagacctggaaaatggtgttgctggtgctgtgtgtatcccagctgatgatgctgggaaaatggaggtaattgcagctttggttgctaatgttgaggcaatgattaaagctgaccgcaaaattactgccttgaaagagttacagggacatatttggcaaactgggttccagaacaatgagttagagggacttgtttttgatgatgtacctgcaactcttgagaaatggaccgctttaggcatcaaggtgtacatatactcaagcggcagcagattggcacagaggcttttgtttggtcacacaaaacatggagacctgagaaaatttctctatgggtttttcgatacaacagtgggcaacaagagagaaacaaaaagttatgcagaaattacagcgtcgttgggagtagataatccatcagagattttgtttgtgacagatgtctatcaagaagccacagctgcaaaggcagcaggtttgggatgtgataatctncatcagacctggaaacggacctcttccagataatcacgggttcaggacagtcaaatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="67185" stop="63856"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66885" g_stop="66739" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="147" r_length="147" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66738" i_stop="65566" i_length="1173">
            <donor d_prob="0.968" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65565" g_stop="65416" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="148" r_stop="297" r_length="150" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65415" i_stop="65301" i_length="115">
            <donor d_prob="0.431" d_score="0.98"/>
            <acceptor a_prob="0.943" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65300" g_stop="65199" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="298" r_stop="399" r_length="102" r_score="0.941"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="65198" i_stop="64946" i_length="253">
            <donor d_prob="0.970" d_score="0.92"/>
            <acceptor a_prob="0.983" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="64945" g_stop="64836" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="400" r_stop="509" r_length="110" r_score="0.964"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="64835" i_stop="64753" i_length="83">
            <donor d_prob="0.885" d_score="0.96"/>
            <acceptor a_prob="0.983" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="64752" g_stop="64634" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="510" r_stop="628" r_length="119" r_score="0.983"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="64633" i_stop="64233" i_length="401">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.915" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="64232" g_stop="64156" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="629" r_stop="706" r_length="78" r_score="0.896"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E455616" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>705</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E455616" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66885" e_stop="66739"/>
          <exon e_start="65565" e_stop="65416"/>
          <exon e_start="65300" e_stop="65199"/>
          <exon e_start="64945" e_stop="64836"/>
          <exon e_start="64752" e_stop="64634"/>
          <exon e_start="64232" e_stop="64156"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTGGATATCGAAGGAACTACTACTCCAATATCATTTGTTACTGAGGTTCTATTCCCTTATGCACGTAATAATGTTGGGAGACATTTGGATGCAACATATGATTCAGCAGAGACTCAACAGGATATTAAGTTATTACGCGCTCAAGTAAGTAAACTTACAGAGAAAATAGCTTTGTGAAAAAGGTTTTCAAAAGAGTTGAGCATTTTTCTTTGAAAAATTGTGGTAGATGTTATTATGTCGTAATGGTGATGTCTGTTTTGGAGAACATTAAGAAGTTTTAACAGAACTTTTGGGTGTAACTGTAATAAACCTGAAAAGTTGATGAGAAATCCAAATCTGGATTGCTAAGGTTGTGCCAGGCTAGGAACGACATCCAACCTCCTTGGAGCTGCTGAATAAGTTCTGCCAGATGGCCTGCAGAAGTGTTATCTTCAATTTAGTCATTTTGTCTTGTTTTCCTTGGCGTGTTAATGGATGGATTAGAAGTGTCCACATTTGGTATTTAATGCATCGTAATTCATATGAGTTAAAGAAAAAAGACTATCACTACATTTCTTCTTGGTAATGCCGTGATGCTGATCTTTTAGGAATATTTTCTGTTTCAGTTACCAAATTGTCCTACTTTCATATGTGCTTTTCTTTTCCTATATATTCGATCAGTTGCTCATGTGGTCTCATGAATTTCGTGTTGGATAATTAATCCTCCGTTACAATTTACATCAGCACCACCTATTTGAATTTTCTAATAGCAAGATAGAAGTTCTTTTCATAAACACTAATTAGCATATATGTCTCTGACCTTTCACACAATCATACATAGTTCTATTCAAAATTTGATTGCTGGAGCTATGTTTATGTGCTTTGTCTTTCTCTGAAACCAGTGTAAATTGTCAAGTGATGTTTGAAAGGACATTAAGAAATGACAAATATATCAGATAGGGGTCATTTTGTTTGTGACTTGCTGAGAAGAAGCCCCGGGGGGGGGGGGGAGGGGGGGGGGAGGGGGGAGGAGAGTTTTGTTGGTGGGTGTCTGGCATGAGTTTTGGAAAAGCGGAAGCTAATCCTGATCCAATTTGAGGGTGTCCATTACAGGGTCGCAGTGTAGATGTGTGGTTTCTCATACATCGAGTCCATCAACACACAAGATGCTCTAGTTTTTTTACATACAAGGTCATCATTCGGTGTTTTTCACATAAAACTGTCTGCTTTCAAATTTAAAAAGTATAAAACAGTACAGATACTTTGTGCTGCTTTTTTTTTTTTTTATATATATATATATATATTCTTAATCTTACCTCCTTTGTGATATTCTTTCAGGTGCAACAAGACCTGGAAAATGGTGTTGCTGGTGCTGTGTGTATCCCAGCTGATGATGCTGGGAAAATGGAGGTAATTGCAGCTTTGGTCGCTAATGTTGAGGCAATGATTAAAGCTGACCGCAAGATTACTGCCTTGAAAGAGTTACAGGTGAGGACAGTGGTGGTGAAATTTCACCTAGGCCCCTCAAATAGTTATAAATGTTATACAGTTTCATCTAATAGTTGCTTACAGTTCGTTCTTTACTTCATATTCTAATACTCAGGGGCATATTTGGCAAACTGGGTTCCAAAACAATGAGTTAGAGGGACTTGTTTTTGATGATGTACCTTCAGCTCTTGAGAAATGGACTGCTTTAGGCGTCAAGGTTTCATCTGTCCCTTTTTTCCGTACAGTGCATTCCTCATTTTAGTAAGCTAGAGTTAACTAGTTGTATCCAAATTTTTGTTGCAAATCAAAACAATTATGATCATCGAAACAATAGCTCTATTTCTTCTTGAAAAACTCCAGCGTCCTGTGTGGTTTAAATGCTCTCTTCCTCTTCTTCATTATCAGAAAGTGGTAATGCTGAAGTCTATGAGCTCCATCTACTAGTCAGATTAACTGGTTTTTTCTCTCAGGTGTACATATACTCGAGTGGCAGCAGATTGGCACAGAGGCTTTTGTTTGGTCACACAAAACATGGAGACCTGAGAAAATTTCTCTATGGATTTTTTGATACAACAGTGGGGTAAATTACTACCTCTCCGCGGGTTTTCATATTTTGGTCCTATTTGTCATTTGAAGTAATTCATCTTTCTTCTCCCGTTGTAGCAACAAGAGAGAAACAAAAAGTTATGCAGAAATTACTGCGTCGTTGGGTGTAGATAATCCATCAGAGATTTTGTTTGTGACAGATGTCTATCAAGAAGCCACAGCTGCAAAGGCAGCAGGTAACATCCTGGTCATTTTGTATGAAAACAACTCTATATATGATATTTGCTAGCTTTCTCACTCTTCAATGAAACCAAATACTAGCTAAAAAAGTAGGTCGGTATTTAAGTGGAGAAAGAAAGAGAGACGTGTGCATTATCCACCGACTCCGAGTTTCAAACCATATGCCAATGCCTTGGGGGATTTCTCGGTTATTAAAAAAAAAAGTAGCTCGGCCAACAACTGTGTTGCCAATTTAGGATGTTAGAACGTCCATTTTTTTGTGTGATTCCTCCTCCCAATCCCAACAACTAGGAGCTCATCTAGACAAATTTGTGCGGCTGGAGCCTGTGTGATGTTTCTTATACTAAAAGCTATACTTCACTTTAAACTGACATTGTTGCCCTTTCTCCTCCTTCAGGTTT-GGAAGTGATAATCTCTATCAGACCAGGAAACGGACCTCTTCCAGATAGTCACGAGTTCAGGACAGTCAAATCA</genome_strand>
        <mrna_strand>GTTTTGGATATCGAAGGAACCACTACCCCAATATCATTTGTTACTGATGTTCTATTCCCTTATGCACGTAATAATGTTGGGAGACATTTGGATGCAACATATGATTCAGCAGAAACTCAACAGGATATTAAGTTATTACGTGCTCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAACAAGACCTGGAAAATGGTGTTGCTGGTGCTGTGTGTATCCCAGCTGATGATGCTGGGAAAATGGAGGTAATTGCAGCTTTGGTTGCTAATGTTGAGGCAATGATTAAAGCTGACCGCAAAATTACTGCCTTGAAAGAGTTACAG...................................................................................................................GGACATATTTGGCAAACTGGGTTCCAGAACAATGAGTTAGAGGGACTTGTTTTTGATGATGTACCTGCAACTCTTGAGAAATGGACCGCTTTAGGCATCAAG.............................................................................................................................................................................................................................................................GTGTACATATACTCAAGCGGCAGCAGATTGGCACAGAGGCTTTTGTTTGGTCACACAAAACATGGAGACCTGAGAAAATTTCTCTATGGGTTTTTCGATACAACAGTGGG...................................................................................CAACAAGAGAGAAACAAAAAGTTATGCAGAAATTACAGCGTCGTTGGGAGTAGATAATCCATCAGAGATTTTGTTTGTGACAGATGTCTATCAAGAAGCCACAGCTGCAAAGGCAGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGGATGTGATAATCTNCATCAGACCTGGAAACGGACCTCTTCCAGATAATCACGGGTTCAGGACAGTCAAATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E238220" ref_strand="+" ref_description="SGN-E238220 [cLED-22-E18]">
      <seq>agctttggtcgctaatgttgaggcaatgattaaagctgaccgcaagattactgccttgaaagagttacaggggcatatttggcaaactgggttccaaaacaatgagttagagggacttgtttttgatgatgtaccttcagctcttgagaaatggactgctttaggcgtcaaggtgtacatatactcgagtggcagcagattggcacagaggcttttgtttggtcacacaaaacatggagacctgagaaaatttctctatggattttttgatacaacagtgggcaacaagagagaaacaaaaagttatgcagaaattactgcgtcgttgggtgtagataatccatcagagattttgtttgtgacagatgtctatcaagaagccacagctgcaaaggcagcaggtttggaagtgataatctctatcagaccaggaaacggacctcttccagatagtcacgagttcagga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="65785" stop="63867"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65485" g_stop="65416" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="70" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65415" i_stop="65301" i_length="115">
            <donor d_prob="0.431" d_score="1.00"/>
            <acceptor a_prob="0.943" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65300" g_stop="65199" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="71" r_stop="172" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65198" i_stop="64946" i_length="253">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64945" g_stop="64836" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="282" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="64835" i_stop="64753" i_length="83">
            <donor d_prob="0.885" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="64752" g_stop="64634" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="401" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="64633" i_stop="64233" i_length="401">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.915" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="64232" g_stop="64167" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="402" r_stop="467" r_length="66" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E238220" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>467</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E238220" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65485" e_stop="65416"/>
          <exon e_start="65300" e_stop="65199"/>
          <exon e_start="64945" e_stop="64836"/>
          <exon e_start="64752" e_stop="64634"/>
          <exon e_start="64232" e_stop="64167"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTTTGGTCGCTAATGTTGAGGCAATGATTAAAGCTGACCGCAAGATTACTGCCTTGAAAGAGTTACAGGTGAGGACAGTGGTGGTGAAATTTCACCTAGGCCCCTCAAATAGTTATAAATGTTATACAGTTTCATCTAATAGTTGCTTACAGTTCGTTCTTTACTTCATATTCTAATACTCAGGGGCATATTTGGCAAACTGGGTTCCAAAACAATGAGTTAGAGGGACTTGTTTTTGATGATGTACCTTCAGCTCTTGAGAAATGGACTGCTTTAGGCGTCAAGGTTTCATCTGTCCCTTTTTTCCGTACAGTGCATTCCTCATTTTAGTAAGCTAGAGTTAACTAGTTGTATCCAAATTTTTGTTGCAAATCAAAACAATTATGATCATCGAAACAATAGCTCTATTTCTTCTTGAAAAACTCCAGCGTCCTGTGTGGTTTAAATGCTCTCTTCCTCTTCTTCATTATCAGAAAGTGGTAATGCTGAAGTCTATGAGCTCCATCTACTAGTCAGATTAACTGGTTTTTTCTCTCAGGTGTACATATACTCGAGTGGCAGCAGATTGGCACAGAGGCTTTTGTTTGGTCACACAAAACATGGAGACCTGAGAAAATTTCTCTATGGATTTTTTGATACAACAGTGGGGTAAATTACTACCTCTCCGCGGGTTTTCATATTTTGGTCCTATTTGTCATTTGAAGTAATTCATCTTTCTTCTCCCGTTGTAGCAACAAGAGAGAAACAAAAAGTTATGCAGAAATTACTGCGTCGTTGGGTGTAGATAATCCATCAGAGATTTTGTTTGTGACAGATGTCTATCAAGAAGCCACAGCTGCAAAGGCAGCAGGTAACATCCTGGTCATTTTGTATGAAAACAACTCTATATATGATATTTGCTAGCTTTCTCACTCTTCAATGAAACCAAATACTAGCTAAAAAAGTAGGTCGGTATTTAAGTGGAGAAAGAAAGAGAGACGTGTGCATTATCCACCGACTCCGAGTTTCAAACCATATGCCAATGCCTTGGGGGATTTCTCGGTTATTAAAAAAAAAAGTAGCTCGGCCAACAACTGTGTTGCCAATTTAGGATGTTAGAACGTCCATTTTTTTGTGTGATTCCTCCTCCCAATCCCAACAACTAGGAGCTCATCTAGACAAATTTGTGCGGCTGGAGCCTGTGTGATGTTTCTTATACTAAAAGCTATACTTCACTTTAAACTGACATTGTTGCCCTTTCTCCTCCTTCAGGTTTGGAAGTGATAATCTCTATCAGACCAGGAAACGGACCTCTTCCAGATAGTCACGAGTTCAGGA</genome_strand>
        <mrna_strand>AGCTTTGGTCGCTAATGTTGAGGCAATGATTAAAGCTGACCGCAAGATTACTGCCTTGAAAGAGTTACAG...................................................................................................................GGGCATATTTGGCAAACTGGGTTCCAAAACAATGAGTTAGAGGGACTTGTTTTTGATGATGTACCTTCAGCTCTTGAGAAATGGACTGCTTTAGGCGTCAAG.............................................................................................................................................................................................................................................................GTGTACATATACTCGAGTGGCAGCAGATTGGCACAGAGGCTTTTGTTTGGTCACACAAAACATGGAGACCTGAGAAAATTTCTCTATGGATTTTTTGATACAACAGTGGG...................................................................................CAACAAGAGAGAAACAAAAAGTTATGCAGAAATTACTGCGTCGTTGGGTGTAGATAATCCATCAGAGATTTTGTTTGTGACAGATGTCTATCAAGAAGCCACAGCTGCAAAGGCAGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGAAGTGATAATCTCTATCAGACCAGGAAACGGACCTCTTCCAGATAGTCACGAGTTCAGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E464325" ref_strand="+" ref_description="SGN-E464325 [cPRO-17-N5]">
      <seq>ctgttatccacagtcatggaatggaatcctgtcttgtaacgatgctcaatccactagcaaaagaatttcggatcactcatatggaaatgataaaaggaattcaagggcatggttactatgacgaacttgtggttcctatcatagagaacactgcatatgagagagaactcacagaatctcttgctgaagctatcaaagcttacccaaaaacaacagctgtgctggtccgcaaccatggtatatatgtatggggagattcttggatcagcgctaaaacacagtctgagtgctaccactacctctttgatgctgcaattaaacttcatcaattaggaattgactggacaacaccagctcatggtcccattcagaatgcaaaaatatctgcacttgctccaaatggcagcataaagtcatcaaggcggtgcatcgttttggatatcgaaggaaccactaccccaatatcatttgttactgatgttctattcccttatgcacgtaataatgttgggagacatttggatgcaacatatgattcagcagaaactcaacaggatattaagttattacgtgctcaagtgcaacaagacctggaaaatggtgttgctggtgctgtgtgtatcccagctgatgatgctgggaaaatggaggtaattgcagctttggttgctaatggtgaggcaatgattaaagctgaccgcaaaatactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="68720" stop="65133"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68420" g_stop="68350" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="71" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68349" i_stop="67814" i_length="536">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="67813" g_stop="67694" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="191" r_length="120" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="67693" i_stop="67487" i_length="207">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67486" g_stop="67397" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="281" r_length="90" r_score="0.967"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="67396" i_stop="67147" i_length="250">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67146" g_stop="67006" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="422" r_length="141" r_score="0.986"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="67005" i_stop="66895" i_length="111">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="66894" g_stop="66739" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="423" r_stop="578" r_length="156" r_score="0.968"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="66738" i_stop="65566" i_length="1173">
            <donor d_prob="0.968" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="65565" g_stop="65433" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="579" r_stop="710" r_length="132" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E464325" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>711</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E464325" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68420" e_stop="68350"/>
          <exon e_start="67813" e_stop="67694"/>
          <exon e_start="67486" e_stop="67397"/>
          <exon e_start="67146" e_stop="67006"/>
          <exon e_start="66894" e_stop="66739"/>
          <exon e_start="65565" e_stop="65433"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTTATCCACAGTCATGGAATGGAATCCTGTCTTGTAACGATGCTCAATCCACTAGCAAAAGAATTTCGGGTAAACATGCTACAAATTTTTGTGAAGTTAGCTACATCTTGATGTGATTCCGATAACATGTTTTTGAGTCATCAAGAAAAAAGAGACTCGGTAATGCTGAGCTTCAAGCATTCAATTCAGTGCGTGTTATGCTGACTACTGATATTATGTCTTTTTATTTGAGAGTAAGAATTTTCTTTCAAATAGAGCAACTTTTGCTTTTCCATACGTTATAAGAAGTGTAATCCTTATGCATCTTCCCTTTGCCTGCATCTGTATAGGCGAGACTTTCTTTATAAATTTATTTATGTAGTTACTTCATGTAGCCGACACAACTAGTTTTGGAATTGAGGCATAAGTGATTGATCTCTTGATATCATTTGCATTTGAAACTTCCTTTTTACGAATGTATAGAGTTGCTATTGTCTCTATATCCTCCACCTAATTCCCCTAGCTCAATTGATAATATTTTAAAGATTTAATTCCGCATTGTAAATTACTGAAACCTATTGTTATTTTTCATCTTATTCACTATTCGTTGTTGCTTTGATTGACAGATCACTCATATGGAAATGATAAAAGGAATTCAAGGGCATGGTTACTATGATGAACTTGTGGTTCCTATCATAGAGAACACTGCATATGAGAGAGAACTCACAGAATCTCTTGCTGAAGCTGTAAGCGTCTCCCTCTTCAAAAAGTCACACCCTTCCATTGTGTATCTGTACTTGTTTAGTTTTTTTACTGCTGCTTTAACTTAGTTTTTAGATACTTGTACTGGAATTTCTATAAGTACATCAACTCCATTCCTGTTTTTGTTTGGCTATGATCACCAAACATTGTGCTAACAGTTTCCACTTGAACTTTTTTTCCATGTTGAACAGATCAAAGCTTACCCGAAAACGACAGCTGTGCTGGTTCGCAACCATGGTATATATGTATGGGGAGATTCTTGGATCAGCGCTAAAACACAGGTTTGTGTCATGGCTTATATTAGGAGGGGAGGGGGAGGGTTTGACATGGTTAGGTAGCAGATTTTAGAACTAATAAGATTAACTTAACTTGTGTTAGTAAGTTAAGGATGACCTCTGAAGGAGTTTCTACGTACATCTTGTAGTCTACTTAAAAATGTACATATGGAAACAGTCTTCAGATCAATTAGTTTAATGTATCTGAGATTTATGTTTCATTTGGCACTCTTCTAACTGACATACTATCTTCCAGTCTGAGTGCTACCACTACCTCTTTGATGCTGCAATTAAACTACATCAATTAGGAATTGACTGGACAACACCAGCTCATGGTCCCATTCAGAATGCAAAAATATCTGCACTTGCTCCAAATGGCAGCATAAAGCCATCAAGGGTAAGCACCGCAACAGTTTAGACTATTCTCTTACTTTCTTAAAATCGAAAGTAGGTGTTTCCATTGAATTCTTATTGTTGTCTGCATTGTGATATATATACTTTCTTGCAGCGGTGCATCGTTTTGGATATCGAAGGAACTACTACTCCAATATCATTTGTTACTGAGGTTCTATTCCCTTATGCACGTAATAATGTTGGGAGACATTTGGATGCAACATATGATTCAGCAGAGACTCAACAGGATATTAAGTTATTACGCGCTCAAGTAAGTAAACTTACAGAGAAAATAGCTTTGTGAAAAAGGTTTTCAAAAGAGTTGAGCATTTTTCTTTGAAAAATTGTGGTAGATGTTATTATGTCGTAATGGTGATGTCTGTTTTGGAGAACATTAAGAAGTTTTAACAGAACTTTTGGGTGTAACTGTAATAAACCTGAAAAGTTGATGAGAAATCCAAATCTGGATTGCTAAGGTTGTGCCAGGCTAGGAACGACATCCAACCTCCTTGGAGCTGCTGAATAAGTTCTGCCAGATGGCCTGCAGAAGTGTTATCTTCAATTTAGTCATTTTGTCTTGTTTTCCTTGGCGTGTTAATGGATGGATTAGAAGTGTCCACATTTGGTATTTAATGCATCGTAATTCATATGAGTTAAAGAAAAAAGACTATCACTACATTTCTTCTTGGTAATGCCGTGATGCTGATCTTTTAGGAATATTTTCTGTTTCAGTTACCAAATTGTCCTACTTTCATATGTGCTTTTCTTTTCCTATATATTCGATCAGTTGCTCATGTGGTCTCATGAATTTCGTGTTGGATAATTAATCCTCCGTTACAATTTACATCAGCACCACCTATTTGAATTTTCTAATAGCAAGATAGAAGTTCTTTTCATAAACACTAATTAGCATATATGTCTCTGACCTTTCACACAATCATACATAGTTCTATTCAAAATTTGATTGCTGGAGCTATGTTTATGTGCTTTGTCTTTCTCTGAAACCAGTGTAAATTGTCAAGTGATGTTTGAAAGGACATTAAGAAATGACAAATATATCAGATAGGGGTCATTTTGTTTGTGACTTGCTGAGAAGAAGCCCCGGGGGGGGGGGGGAGGGGGGGGGGAGGGGGGAGGAGAGTTTTGTTGGTGGGTGTCTGGCATGAGTTTTGGAAAAGCGGAAGCTAATCCTGATCCAATTTGAGGGTGTCCATTACAGGGTCGCAGTGTAGATGTGTGGTTTCTCATACATCGAGTCCATCAACACACAAGATGCTCTAGTTTTTTTACATACAAGGTCATCATTCGGTGTTTTTCACATAAAACTGTCTGCTTTCAAATTTAAAAAGTATAAAACAGTACAGATACTTTGTGCTGCTTTTTTTTTTTTTTATATATATATATATATATTCTTAATCTTACCTCCTTTGTGATATTCTTTCAGGTGCAACAAGACCTGGAAAATGGTGTTGCTGGTGCTGTGTGTATCCCAGCTGATGATGCTGGGAAAATGGAGGTAATTGCAGCTTTGGTCGCTAATGTTGAGGCAATGATTAAAGCTGACCGCAAGATTACTG</genome_strand>
        <mrna_strand>CTGTTATCCACAGTCATGGAATGGAATCCTGTCTTGTAACGATGCTCAATCCACTAGCAAAAGAATTTCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACTCATATGGAAATGATAAAAGGAATTCAAGGGCATGGTTACTATGACGAACTTGTGGTTCCTATCATAGAGAACACTGCATATGAGAGAGAACTCACAGAATCTCTTGCTGAAGCT...............................................................................................................................................................................................................ATCAAAGCTTACCCAAAAACAACAGCTGTGCTGGTCCGCAACCATGGTATATATGTATGGGGAGATTCTTGGATCAGCGCTAAAACACAG..........................................................................................................................................................................................................................................................TCTGAGTGCTACCACTACCTCTTTGATGCTGCAATTAAACTTCATCAATTAGGAATTGACTGGACAACACCAGCTCATGGTCCCATTCAGAATGCAAAAATATCTGCACTTGCTCCAAATGGCAGCATAAAGTCATCAAGG...............................................................................................................CGGTGCATCGTTTTGGATATCGAAGGAACCACTACCCCAATATCATTTGTTACTGATGTTCTATTCCCTTATGCACGTAATAATGTTGGGAGACATTTGGATGCAACATATGATTCAGCAGAAACTCAACAGGATATTAAGTTATTACGTGCTCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAACAAGACCTGGAAAATGGTGTTGCTGGTGCTGTGTGTATCCCAGCTGATGATGCTGGGAAAATGGAGGTAATTGCAGCTTTGGTTGCTAATGGTGAGGCAATGATTAAAGCTGACCGCAA-AATACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E458144" ref_strand="+" ref_description="SGN-E458144 [cPRO-4-F20]">
      <seq>ggaatcctgtcttgtaacgatgctcaatccactagcaaaagaatttcggatcactcatatggaaatgataaaaggaattcaagggcatggttactatgacgaacttgtggttcctatcatagagaacactgcatgagagagaactcacagaatctcttgctgaagctatcaaagcttacccaaaaacaacagctgtgctggtccgcaaccatggtatatatgtatggggagattcttggatcagcgctaaaacacagtctgagtgctaccactacctctttgatgctgcaattaaacttcatcaattaggaattgactggacaacaccagctcatggtcccattcagaatgcaaaaatatctgcacttgctccaaatggcagcataaagtcatcaaggcggtgcatcgttttggatatcgaaggaaccactaccccaatatcatttgttactgatgttctattcccttatgcacgtaataatgttgggagacatttggatgcaacatatgattcagcagaaactcaacaggatattaagttattacgtgctcaagtgcaacaagacctggaaaatggtgttgctggtgctgtgtgtatcccagctgatgatgctgggaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="68698" stop="65200"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68398" g_stop="68350" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="49" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68349" i_stop="67814" i_length="536">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="67813" g_stop="67694" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="167" r_length="118" r_score="0.975"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="67693" i_stop="67487" i_length="207">
            <donor d_prob="0.957" d_score="0.96"/>
            <acceptor a_prob="0.994" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67486" g_stop="67397" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="168" r_stop="257" r_length="90" r_score="0.967"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="67396" i_stop="67147" i_length="250">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67146" g_stop="67006" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="258" r_stop="398" r_length="141" r_score="0.986"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="67005" i_stop="66895" i_length="111">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="66894" g_stop="66739" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="399" r_stop="554" r_length="156" r_score="0.968"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="66738" i_stop="65566" i_length="1173">
            <donor d_prob="0.968" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="65565" g_stop="65500" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="555" r_stop="620" r_length="66" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E458144" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>622</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E458144" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68398" e_stop="68350"/>
          <exon e_start="67813" e_stop="67694"/>
          <exon e_start="67486" e_stop="67397"/>
          <exon e_start="67146" e_stop="67006"/>
          <exon e_start="66894" e_stop="66739"/>
          <exon e_start="65565" e_stop="65500"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAATCCTGTCTTGTAACGATGCTCAATCCACTAGCAAAAGAATTTCGGGTAAACATGCTACAAATTTTTGTGAAGTTAGCTACATCTTGATGTGATTCCGATAACATGTTTTTGAGTCATCAAGAAAAAAGAGACTCGGTAATGCTGAGCTTCAAGCATTCAATTCAGTGCGTGTTATGCTGACTACTGATATTATGTCTTTTTATTTGAGAGTAAGAATTTTCTTTCAAATAGAGCAACTTTTGCTTTTCCATACGTTATAAGAAGTGTAATCCTTATGCATCTTCCCTTTGCCTGCATCTGTATAGGCGAGACTTTCTTTATAAATTTATTTATGTAGTTACTTCATGTAGCCGACACAACTAGTTTTGGAATTGAGGCATAAGTGATTGATCTCTTGATATCATTTGCATTTGAAACTTCCTTTTTACGAATGTATAGAGTTGCTATTGTCTCTATATCCTCCACCTAATTCCCCTAGCTCAATTGATAATATTTTAAAGATTTAATTCCGCATTGTAAATTACTGAAACCTATTGTTATTTTTCATCTTATTCACTATTCGTTGTTGCTTTGATTGACAGATCACTCATATGGAAATGATAAAAGGAATTCAAGGGCATGGTTACTATGATGAACTTGTGGTTCCTATCATAGAGAACACTGCATATGAGAGAGAACTCACAGAATCTCTTGCTGAAGCTGTAAGCGTCTCCCTCTTCAAAAAGTCACACCCTTCCATTGTGTATCTGTACTTGTTTAGTTTTTTTACTGCTGCTTTAACTTAGTTTTTAGATACTTGTACTGGAATTTCTATAAGTACATCAACTCCATTCCTGTTTTTGTTTGGCTATGATCACCAAACATTGTGCTAACAGTTTCCACTTGAACTTTTTTTCCATGTTGAACAGATCAAAGCTTACCCGAAAACGACAGCTGTGCTGGTTCGCAACCATGGTATATATGTATGGGGAGATTCTTGGATCAGCGCTAAAACACAGGTTTGTGTCATGGCTTATATTAGGAGGGGAGGGGGAGGGTTTGACATGGTTAGGTAGCAGATTTTAGAACTAATAAGATTAACTTAACTTGTGTTAGTAAGTTAAGGATGACCTCTGAAGGAGTTTCTACGTACATCTTGTAGTCTACTTAAAAATGTACATATGGAAACAGTCTTCAGATCAATTAGTTTAATGTATCTGAGATTTATGTTTCATTTGGCACTCTTCTAACTGACATACTATCTTCCAGTCTGAGTGCTACCACTACCTCTTTGATGCTGCAATTAAACTACATCAATTAGGAATTGACTGGACAACACCAGCTCATGGTCCCATTCAGAATGCAAAAATATCTGCACTTGCTCCAAATGGCAGCATAAAGCCATCAAGGGTAAGCACCGCAACAGTTTAGACTATTCTCTTACTTTCTTAAAATCGAAAGTAGGTGTTTCCATTGAATTCTTATTGTTGTCTGCATTGTGATATATATACTTTCTTGCAGCGGTGCATCGTTTTGGATATCGAAGGAACTACTACTCCAATATCATTTGTTACTGAGGTTCTATTCCCTTATGCACGTAATAATGTTGGGAGACATTTGGATGCAACATATGATTCAGCAGAGACTCAACAGGATATTAAGTTATTACGCGCTCAAGTAAGTAAACTTACAGAGAAAATAGCTTTGTGAAAAAGGTTTTCAAAAGAGTTGAGCATTTTTCTTTGAAAAATTGTGGTAGATGTTATTATGTCGTAATGGTGATGTCTGTTTTGGAGAACATTAAGAAGTTTTAACAGAACTTTTGGGTGTAACTGTAATAAACCTGAAAAGTTGATGAGAAATCCAAATCTGGATTGCTAAGGTTGTGCCAGGCTAGGAACGACATCCAACCTCCTTGGAGCTGCTGAATAAGTTCTGCCAGATGGCCTGCAGAAGTGTTATCTTCAATTTAGTCATTTTGTCTTGTTTTCCTTGGCGTGTTAATGGATGGATTAGAAGTGTCCACATTTGGTATTTAATGCATCGTAATTCATATGAGTTAAAGAAAAAAGACTATCACTACATTTCTTCTTGGTAATGCCGTGATGCTGATCTTTTAGGAATATTTTCTGTTTCAGTTACCAAATTGTCCTACTTTCATATGTGCTTTTCTTTTCCTATATATTCGATCAGTTGCTCATGTGGTCTCATGAATTTCGTGTTGGATAATTAATCCTCCGTTACAATTTACATCAGCACCACCTATTTGAATTTTCTAATAGCAAGATAGAAGTTCTTTTCATAAACACTAATTAGCATATATGTCTCTGACCTTTCACACAATCATACATAGTTCTATTCAAAATTTGATTGCTGGAGCTATGTTTATGTGCTTTGTCTTTCTCTGAAACCAGTGTAAATTGTCAAGTGATGTTTGAAAGGACATTAAGAAATGACAAATATATCAGATAGGGGTCATTTTGTTTGTGACTTGCTGAGAAGAAGCCCCGGGGGGGGGGGGGAGGGGGGGGGGAGGGGGGAGGAGAGTTTTGTTGGTGGGTGTCTGGCATGAGTTTTGGAAAAGCGGAAGCTAATCCTGATCCAATTTGAGGGTGTCCATTACAGGGTCGCAGTGTAGATGTGTGGTTTCTCATACATCGAGTCCATCAACACACAAGATGCTCTAGTTTTTTTACATACAAGGTCATCATTCGGTGTTTTTCACATAAAACTGTCTGCTTTCAAATTTAAAAAGTATAAAACAGTACAGATACTTTGTGCTGCTTTTTTTTTTTTTTATATATATATATATATATTCTTAATCTTACCTCCTTTGTGATATTCTTTCAGGTGCAACAAGACCTGGAAAATGGTGTTGCTGGTGCTGTGTGTATCCCAGCTGATGATGCTGGGAAA</genome_strand>
        <mrna_strand>GGAATCCTGTCTTGTAACGATGCTCAATCCACTAGCAAAAGAATTTCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACTCATATGGAAATGATAAAAGGAATTCAAGGGCATGGTTACTATGACGAACTTGTGGTTCCTATCATAGAGAACACTGC--ATGAGAGAGAACTCACAGAATCTCTTGCTGAAGCT...............................................................................................................................................................................................................ATCAAAGCTTACCCAAAAACAACAGCTGTGCTGGTCCGCAACCATGGTATATATGTATGGGGAGATTCTTGGATCAGCGCTAAAACACAG..........................................................................................................................................................................................................................................................TCTGAGTGCTACCACTACCTCTTTGATGCTGCAATTAAACTTCATCAATTAGGAATTGACTGGACAACACCAGCTCATGGTCCCATTCAGAATGCAAAAATATCTGCACTTGCTCCAAATGGCAGCATAAAGTCATCAAGG...............................................................................................................CGGTGCATCGTTTTGGATATCGAAGGAACCACTACCCCAATATCATTTGTTACTGATGTTCTATTCCCTTATGCACGTAATAATGTTGGGAGACATTTGGATGCAACATATGATTCAGCAGAAACTCAACAGGATATTAAGTTATTACGTGCTCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAACAAGACCTGGAAAATGGTGTTGCTGGTGCTGTGTGTATCCCAGCTGATGATGCTGGGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E399895" ref_strand="+" ref_description="SGN-E399895 [cSTC-2-P22]">
      <seq>tgctggtgctgttatccacagtcatggaatggaatcctgccttgtaacgatgctcaatccactagcaaaagaatttcggatcactcatatggaaatgataaaaggaattcaagggcatggttactatgacgaacttgtggttcctatcatagagaacactgcatatgagagagaactcacagaatctcttgctgaagctatcaaagcttaccctaaaacaacagctgtgctggtccgcaaccatggtatatatgtatggggagattcttggatcagtgctaaaacacagtctgagtgctaccactacctctttgatgctgcaattaaacttcatcaattaggaattgactggacaacaccagctcatggtcccattcagaatgcaaaaatatctgcacttgctccaaatgacggcataaagccatcaaggcggtgcatcgttttggatatcgaaggaaccactaccccaatatcatttgttactgatgttctattcccttatgcacgtaataatgttgggagacatttggatgcaacatatgattcagcagaaactcaacaggatattaagttattacgcgctcaagtgcaacaagacctggaaaatggtgttgctggtgctgtgtgtatcccagctgatgatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="68728" stop="57761"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68428" g_stop="68350" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68349" i_stop="67814" i_length="536">
            <donor d_prob="0.935" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="67813" g_stop="67694" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="199" r_length="120" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="67693" i_stop="67487" i_length="207">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67486" g_stop="67397" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="200" r_stop="289" r_length="90" r_score="0.956"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="67396" i_stop="67147" i_length="250">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67146" g_stop="67006" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="290" r_stop="430" r_length="141" r_score="0.979"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="67005" i_stop="66895" i_length="111">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="66894" g_stop="66739" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="431" r_stop="586" r_length="156" r_score="0.974"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="66738" i_stop="65566" i_length="1173">
            <donor d_prob="0.968" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="65565" g_stop="65506" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="587" r_stop="646" r_length="60" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E399895" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>646</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E399895" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68428" e_stop="68350"/>
          <exon e_start="67813" e_stop="67694"/>
          <exon e_start="67486" e_stop="67397"/>
          <exon e_start="67146" e_stop="67006"/>
          <exon e_start="66894" e_stop="66739"/>
          <exon e_start="65565" e_stop="65506"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTGGTGCTGTTATCCACAGTCATGGAATGGAATCCTGTCTTGTAACGATGCTCAATCCACTAGCAAAAGAATTTCGGGTAAACATGCTACAAATTTTTGTGAAGTTAGCTACATCTTGATGTGATTCCGATAACATGTTTTTGAGTCATCAAGAAAAAAGAGACTCGGTAATGCTGAGCTTCAAGCATTCAATTCAGTGCGTGTTATGCTGACTACTGATATTATGTCTTTTTATTTGAGAGTAAGAATTTTCTTTCAAATAGAGCAACTTTTGCTTTTCCATACGTTATAAGAAGTGTAATCCTTATGCATCTTCCCTTTGCCTGCATCTGTATAGGCGAGACTTTCTTTATAAATTTATTTATGTAGTTACTTCATGTAGCCGACACAACTAGTTTTGGAATTGAGGCATAAGTGATTGATCTCTTGATATCATTTGCATTTGAAACTTCCTTTTTACGAATGTATAGAGTTGCTATTGTCTCTATATCCTCCACCTAATTCCCCTAGCTCAATTGATAATATTTTAAAGATTTAATTCCGCATTGTAAATTACTGAAACCTATTGTTATTTTTCATCTTATTCACTATTCGTTGTTGCTTTGATTGACAGATCACTCATATGGAAATGATAAAAGGAATTCAAGGGCATGGTTACTATGATGAACTTGTGGTTCCTATCATAGAGAACACTGCATATGAGAGAGAACTCACAGAATCTCTTGCTGAAGCTGTAAGCGTCTCCCTCTTCAAAAAGTCACACCCTTCCATTGTGTATCTGTACTTGTTTAGTTTTTTTACTGCTGCTTTAACTTAGTTTTTAGATACTTGTACTGGAATTTCTATAAGTACATCAACTCCATTCCTGTTTTTGTTTGGCTATGATCACCAAACATTGTGCTAACAGTTTCCACTTGAACTTTTTTTCCATGTTGAACAGATCAAAGCTTACCCGAAAACGACAGCTGTGCTGGTTCGCAACCATGGTATATATGTATGGGGAGATTCTTGGATCAGCGCTAAAACACAGGTTTGTGTCATGGCTTATATTAGGAGGGGAGGGGGAGGGTTTGACATGGTTAGGTAGCAGATTTTAGAACTAATAAGATTAACTTAACTTGTGTTAGTAAGTTAAGGATGACCTCTGAAGGAGTTTCTACGTACATCTTGTAGTCTACTTAAAAATGTACATATGGAAACAGTCTTCAGATCAATTAGTTTAATGTATCTGAGATTTATGTTTCATTTGGCACTCTTCTAACTGACATACTATCTTCCAGTCTGAGTGCTACCACTACCTCTTTGATGCTGCAATTAAACTACATCAATTAGGAATTGACTGGACAACACCAGCTCATGGTCCCATTCAGAATGCAAAAATATCTGCACTTGCTCCAAATGGCAGCATAAAGCCATCAAGGGTAAGCACCGCAACAGTTTAGACTATTCTCTTACTTTCTTAAAATCGAAAGTAGGTGTTTCCATTGAATTCTTATTGTTGTCTGCATTGTGATATATATACTTTCTTGCAGCGGTGCATCGTTTTGGATATCGAAGGAACTACTACTCCAATATCATTTGTTACTGAGGTTCTATTCCCTTATGCACGTAATAATGTTGGGAGACATTTGGATGCAACATATGATTCAGCAGAGACTCAACAGGATATTAAGTTATTACGCGCTCAAGTAAGTAAACTTACAGAGAAAATAGCTTTGTGAAAAAGGTTTTCAAAAGAGTTGAGCATTTTTCTTTGAAAAATTGTGGTAGATGTTATTATGTCGTAATGGTGATGTCTGTTTTGGAGAACATTAAGAAGTTTTAACAGAACTTTTGGGTGTAACTGTAATAAACCTGAAAAGTTGATGAGAAATCCAAATCTGGATTGCTAAGGTTGTGCCAGGCTAGGAACGACATCCAACCTCCTTGGAGCTGCTGAATAAGTTCTGCCAGATGGCCTGCAGAAGTGTTATCTTCAATTTAGTCATTTTGTCTTGTTTTCCTTGGCGTGTTAATGGATGGATTAGAAGTGTCCACATTTGGTATTTAATGCATCGTAATTCATATGAGTTAAAGAAAAAAGACTATCACTACATTTCTTCTTGGTAATGCCGTGATGCTGATCTTTTAGGAATATTTTCTGTTTCAGTTACCAAATTGTCCTACTTTCATATGTGCTTTTCTTTTCCTATATATTCGATCAGTTGCTCATGTGGTCTCATGAATTTCGTGTTGGATAATTAATCCTCCGTTACAATTTACATCAGCACCACCTATTTGAATTTTCTAATAGCAAGATAGAAGTTCTTTTCATAAACACTAATTAGCATATATGTCTCTGACCTTTCACACAATCATACATAGTTCTATTCAAAATTTGATTGCTGGAGCTATGTTTATGTGCTTTGTCTTTCTCTGAAACCAGTGTAAATTGTCAAGTGATGTTTGAAAGGACATTAAGAAATGACAAATATATCAGATAGGGGTCATTTTGTTTGTGACTTGCTGAGAAGAAGCCCCGGGGGGGGGGGGGAGGGGGGGGGGAGGGGGGAGGAGAGTTTTGTTGGTGGGTGTCTGGCATGAGTTTTGGAAAAGCGGAAGCTAATCCTGATCCAATTTGAGGGTGTCCATTACAGGGTCGCAGTGTAGATGTGTGGTTTCTCATACATCGAGTCCATCAACACACAAGATGCTCTAGTTTTTTTACATACAAGGTCATCATTCGGTGTTTTTCACATAAAACTGTCTGCTTTCAAATTTAAAAAGTATAAAACAGTACAGATACTTTGTGCTGCTTTTTTTTTTTTTTATATATATATATATATATTCTTAATCTTACCTCCTTTGTGATATTCTTTCAGGTGCAACAAGACCTGGAAAATGGTGTTGCTGGTGCTGTGTGTATCCCAGCTGATGATGCT</genome_strand>
        <mrna_strand>TGCTGGTGCTGTTATCCACAGTCATGGAATGGAATCCTGCCTTGTAACGATGCTCAATCCACTAGCAAAAGAATTTCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACTCATATGGAAATGATAAAAGGAATTCAAGGGCATGGTTACTATGACGAACTTGTGGTTCCTATCATAGAGAACACTGCATATGAGAGAGAACTCACAGAATCTCTTGCTGAAGCT...............................................................................................................................................................................................................ATCAAAGCTTACCCTAAAACAACAGCTGTGCTGGTCCGCAACCATGGTATATATGTATGGGGAGATTCTTGGATCAGTGCTAAAACACAG..........................................................................................................................................................................................................................................................TCTGAGTGCTACCACTACCTCTTTGATGCTGCAATTAAACTTCATCAATTAGGAATTGACTGGACAACACCAGCTCATGGTCCCATTCAGAATGCAAAAATATCTGCACTTGCTCCAAATGACGGCATAAAGCCATCAAGG...............................................................................................................CGGTGCATCGTTTTGGATATCGAAGGAACCACTACCCCAATATCATTTGTTACTGATGTTCTATTCCCTTATGCACGTAATAATGTTGGGAGACATTTGGATGCAACATATGATTCAGCAGAAACTCAACAGGATATTAAGTTATTACGCGCTCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAACAAGACCTGGAAAATGGTGTTGCTGGTGCTGTGTGTATCCCAGCTGATGATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E208185" ref_strand="+" ref_description="SGN-E208185 [cLEC-37-M7]">
      <seq>gaattcaagggcatggttactatgatgaacttgtggttcctatcatagagaacactgcatatgagagagaactcacagaatctcttgctgaagctatcaaagcttacccgaaaacgacagctgtgctggttcgcaaccatggtatatatgtatggggagattcttggatcagcgctaaaacacagtctgagtgctaccactacctctttgatgctgcaattaaactacatcaattaggaattgactggacaacaccagctcatggtcccattcagaatgcaaaaatatctgcacttgctccaaatggcagcataaagccatcaaggcggtgcatcgttttggatatcgaaggaactactactccaatatcattggttactgaggttctattcccttatgcacgtaataatgttgggagacatttggatgcaacatatgattcagcagagactcaacaggatattaagttattacgcgctca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="68088" stop="66440"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67788" g_stop="67694" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="95" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="67693" i_stop="67487" i_length="207">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="67486" g_stop="67397" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="96" r_stop="185" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="67396" i_stop="67147" i_length="250">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67146" g_stop="67006" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="326" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="67005" i_stop="66895" i_length="111">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="66894" g_stop="66740" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="327" r_stop="481" r_length="155" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E208185" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>481</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E208185" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67788" e_stop="67694"/>
          <exon e_start="67486" e_stop="67397"/>
          <exon e_start="67146" e_stop="67006"/>
          <exon e_start="66894" e_stop="66740"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATTCAAGGGCATGGTTACTATGATGAACTTGTGGTTCCTATCATAGAGAACACTGCATATGAGAGAGAACTCACAGAATCTCTTGCTGAAGCTGTAAGCGTCTCCCTCTTCAAAAAGTCACACCCTTCCATTGTGTATCTGTACTTGTTTAGTTTTTTTACTGCTGCTTTAACTTAGTTTTTAGATACTTGTACTGGAATTTCTATAAGTACATCAACTCCATTCCTGTTTTTGTTTGGCTATGATCACCAAACATTGTGCTAACAGTTTCCACTTGAACTTTTTTTCCATGTTGAACAGATCAAAGCTTACCCGAAAACGACAGCTGTGCTGGTTCGCAACCATGGTATATATGTATGGGGAGATTCTTGGATCAGCGCTAAAACACAGGTTTGTGTCATGGCTTATATTAGGAGGGGAGGGGGAGGGTTTGACATGGTTAGGTAGCAGATTTTAGAACTAATAAGATTAACTTAACTTGTGTTAGTAAGTTAAGGATGACCTCTGAAGGAGTTTCTACGTACATCTTGTAGTCTACTTAAAAATGTACATATGGAAACAGTCTTCAGATCAATTAGTTTAATGTATCTGAGATTTATGTTTCATTTGGCACTCTTCTAACTGACATACTATCTTCCAGTCTGAGTGCTACCACTACCTCTTTGATGCTGCAATTAAACTACATCAATTAGGAATTGACTGGACAACACCAGCTCATGGTCCCATTCAGAATGCAAAAATATCTGCACTTGCTCCAAATGGCAGCATAAAGCCATCAAGGGTAAGCACCGCAACAGTTTAGACTATTCTCTTACTTTCTTAAAATCGAAAGTAGGTGTTTCCATTGAATTCTTATTGTTGTCTGCATTGTGATATATATACTTTCTTGCAGCGGTGCATCGTTTTGGATATCGAAGGAACTACTACTCCAATATCATTTGTTACTGAGGTTCTATTCCCTTATGCACGTAATAATGTTGGGAGACATTTGGATGCAACATATGATTCAGCAGAGACTCAACAGGATATTAAGTTATTACGCGCTCA</genome_strand>
        <mrna_strand>GAATTCAAGGGCATGGTTACTATGATGAACTTGTGGTTCCTATCATAGAGAACACTGCATATGAGAGAGAACTCACAGAATCTCTTGCTGAAGCT...............................................................................................................................................................................................................ATCAAAGCTTACCCGAAAACGACAGCTGTGCTGGTTCGCAACCATGGTATATATGTATGGGGAGATTCTTGGATCAGCGCTAAAACACAG..........................................................................................................................................................................................................................................................TCTGAGTGCTACCACTACCTCTTTGATGCTGCAATTAAACTACATCAATTAGGAATTGACTGGACAACACCAGCTCATGGTCCCATTCAGAATGCAAAAATATCTGCACTTGCTCCAAATGGCAGCATAAAGCCATCAAGG...............................................................................................................CGGTGCATCGTTTTGGATATCGAAGGAACTACTACTCCAATATCATTGGTTACTGAGGTTCTATTCCCTTATGCACGTAATAATGTTGGGAGACATTTGGATGCAACATATGATTCAGCAGAGACTCAACAGGATATTAAGTTATTACGCGCTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E305408" ref_strand="+" ref_description="SGN-E305408 [cLEX-15-O5]">
      <seq>atcaattatgaattgactggacaacaccagctcatggtcccattcagaatgcaaaaatatctgcacttgctccaaatggcagcataaagccatcaaggcggtgcatcgttttggatatcgaaagaactactactccaatatcatttgttactgaggttctattcccttatgcacgtaataatgttgggagacatttggatgcaacatatgattcagcagagactcaacaggatattaagttatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="67403" stop="66448"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67103" g_stop="67006" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="98" r_length="98" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="67005" i_stop="66895" i_length="111">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66894" g_stop="66748" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="245" r_length="147" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E305408" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>245</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E305408" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67103" e_stop="67006"/>
          <exon e_start="66894" e_stop="66748"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCAATTAGGAATTGACTGGACAACACCAGCTCATGGTCCCATTCAGAATGCAAAAATATCTGCACTTGCTCCAAATGGCAGCATAAAGCCATCAAGGGTAAGCACCGCAACAGTTTAGACTATTCTCTTACTTTCTTAAAATCGAAAGTAGGTGTTTCCATTGAATTCTTATTGTTGTCTGCATTGTGATATATATACTTTCTTGCAGCGGTGCATCGTTTTGGATATCGAAGGAACTACTACTCCAATATCATTTGTTACTGAGGTTCTATTCCCTTATGCACGTAATAATGTTGGGAGACATTTGGATGCAACATATGATTCAGCAGAGACTCAACAGGATATTAAGTTATTA</genome_strand>
        <mrna_strand>ATCAATTATGAATTGACTGGACAACACCAGCTCATGGTCCCATTCAGAATGCAAAAATATCTGCACTTGCTCCAAATGGCAGCATAAAGCCATCAAGG...............................................................................................................CGGTGCATCGTTTTGGATATCGAAAGAACTACTACTCCAATATCATTTGTTACTGAGGTTCTATTCCCTTATGCACGTAATAATGTTGGGAGACATTTGGATGCAACATATGATTCAGCAGAGACTCAACAGGATATTAAGTTATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E454742" ref_strand="+" ref_description="SGN-E454742 [cSTS-24-A14]">
      <seq>tatgtatattatggcatcagatgggtctattttatctgcgccggtggctaaacctacccctcataaacctcctaagtgttcggattgtgctcctctttttatgaaggcatatcagatgcgtaatgctggcgctgttatccacagtcatggaatggaatcctgtcttgtaacgatgctcaatccactagcaaaagaatttcggatcactcatatggaaatgataaaaggaattcaagggcatggttactatgacgaacttgtggttcctatcatagagaacactgcatatgagagagaactcacagaatctcttgctgaagctatcaaagcttacccaaaaacaacagctgtgctggtccgcaaccatggtatatatgtatggggagattcttggatcagcgctaaaacacagtctgagtgctaccactacctctttgatgctgcaattaaacttcatcaattaggaattgactggacaacaccagctcatggtcccattcagaatgcaaaaatatctgcacttgctccaaatggcagcataaagtcatcaaggcggtgcatcgttttggatatcgaaggaaccactaccccaatatcatttgttactgatgttctattcccttatgcacgtaataatgttgggagacatttggatgccacatatgattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="69536" stop="66479"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69236" g_stop="69131" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="106" r_length="106" r_score="0.962"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69130" i_stop="68446" i_length="685">
            <donor d_prob="0.958" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68445" g_stop="68350" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="107" r_stop="202" r_length="96" r_score="0.979"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="68349" i_stop="67814" i_length="536">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67813" g_stop="67694" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="203" r_stop="322" r_length="120" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="67693" i_stop="67487" i_length="207">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67486" g_stop="67397" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="412" r_length="90" r_score="0.967"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="67396" i_stop="67147" i_length="250">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="67146" g_stop="67006" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="413" r_stop="553" r_length="141" r_score="0.986"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="67005" i_stop="66895" i_length="111">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="66894" g_stop="66779" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="554" r_stop="669" r_length="116" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E454742" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>669</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E454742" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69236" e_stop="69131"/>
          <exon e_start="68445" e_stop="68350"/>
          <exon e_start="67813" e_stop="67694"/>
          <exon e_start="67486" e_stop="67397"/>
          <exon e_start="67146" e_stop="67006"/>
          <exon e_start="66894" e_stop="66779"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATGTATATTATGTCATCAGATGGGTCTATTTTATCTGCACCGGTGGCTAAACCTACCCCTCATAAACCTCCTAAGTGTTCTGATTGTGCGCCTCTTTTTATGAAGGTATAGAGGTTTCTATAATATGATGAAACAATAGTTGTTGTAGTATTGTAAATTGAAGTTTTACCAATTTGAAAAGTTGTGGAACTAAGGCCTACTGGAAGTTGAATTGTTGTTTTTGGTTAAAATGCTGAAGCTAATTGAAGTTGGTGTTTATTCTCAGCTGTCTAAACTTCTTAGTTGCATAGAAAAAGATGTTATTTTTATCCGGCGGATAATTGTTTTGCAGTCATGTCTATTTTGAAATATCGAAAACAGGTACTACCTTCCAAGGTAGGGGTATGGTTGACTACTCTCTCCTGACCTCACTTGTGGGATTAGATTACACTGGGATGTTGTTGTTGTATTGTATTTGTTCTTTCTCAGTGTAATTGTTATGTTATCCGTAGTCCTTTCTTTGTTTTTGTCTAGCTCAACAAACTTAGCATATTTCATATCTCGCGGTATCATGTTATTATTTCTCTGCTGCCATCTTTTGAATTTGTTTTGTCTCTCTAAATAATCTAGTAACAGCCAGGATCCATGATTTTTTGTGTTGTAGACTGCAGTTACTGAGATATAGCATGACTTCTTTGGAATGGAGAGTGTGATCTCATATTAGTTGATCTATAAATAAATGATTCTCTTTTTCTTTTTGATTGACTATTCTACTCCGCTGATTGTAATTTTTTTCTTTTTTTTTCCTCAGGCATATCTGATGCGTAATGCTGGTGCTGTTATCCACAGTCATGGAATGGAATCCTGTCTTGTAACGATGCTCAATCCACTAGCAAAAGAATTTCGGGTAAACATGCTACAAATTTTTGTGAAGTTAGCTACATCTTGATGTGATTCCGATAACATGTTTTTGAGTCATCAAGAAAAAAGAGACTCGGTAATGCTGAGCTTCAAGCATTCAATTCAGTGCGTGTTATGCTGACTACTGATATTATGTCTTTTTATTTGAGAGTAAGAATTTTCTTTCAAATAGAGCAACTTTTGCTTTTCCATACGTTATAAGAAGTGTAATCCTTATGCATCTTCCCTTTGCCTGCATCTGTATAGGCGAGACTTTCTTTATAAATTTATTTATGTAGTTACTTCATGTAGCCGACACAACTAGTTTTGGAATTGAGGCATAAGTGATTGATCTCTTGATATCATTTGCATTTGAAACTTCCTTTTTACGAATGTATAGAGTTGCTATTGTCTCTATATCCTCCACCTAATTCCCCTAGCTCAATTGATAATATTTTAAAGATTTAATTCCGCATTGTAAATTACTGAAACCTATTGTTATTTTTCATCTTATTCACTATTCGTTGTTGCTTTGATTGACAGATCACTCATATGGAAATGATAAAAGGAATTCAAGGGCATGGTTACTATGATGAACTTGTGGTTCCTATCATAGAGAACACTGCATATGAGAGAGAACTCACAGAATCTCTTGCTGAAGCTGTAAGCGTCTCCCTCTTCAAAAAGTCACACCCTTCCATTGTGTATCTGTACTTGTTTAGTTTTTTTACTGCTGCTTTAACTTAGTTTTTAGATACTTGTACTGGAATTTCTATAAGTACATCAACTCCATTCCTGTTTTTGTTTGGCTATGATCACCAAACATTGTGCTAACAGTTTCCACTTGAACTTTTTTTCCATGTTGAACAGATCAAAGCTTACCCGAAAACGACAGCTGTGCTGGTTCGCAACCATGGTATATATGTATGGGGAGATTCTTGGATCAGCGCTAAAACACAGGTTTGTGTCATGGCTTATATTAGGAGGGGAGGGGGAGGGTTTGACATGGTTAGGTAGCAGATTTTAGAACTAATAAGATTAACTTAACTTGTGTTAGTAAGTTAAGGATGACCTCTGAAGGAGTTTCTACGTACATCTTGTAGTCTACTTAAAAATGTACATATGGAAACAGTCTTCAGATCAATTAGTTTAATGTATCTGAGATTTATGTTTCATTTGGCACTCTTCTAACTGACATACTATCTTCCAGTCTGAGTGCTACCACTACCTCTTTGATGCTGCAATTAAACTACATCAATTAGGAATTGACTGGACAACACCAGCTCATGGTCCCATTCAGAATGCAAAAATATCTGCACTTGCTCCAAATGGCAGCATAAAGCCATCAAGGGTAAGCACCGCAACAGTTTAGACTATTCTCTTACTTTCTTAAAATCGAAAGTAGGTGTTTCCATTGAATTCTTATTGTTGTCTGCATTGTGATATATATACTTTCTTGCAGCGGTGCATCGTTTTGGATATCGAAGGAACTACTACTCCAATATCATTTGTTACTGAGGTTCTATTCCCTTATGCACGTAATAATGTTGGGAGACATTTGGATGCAACATATGATTC</genome_strand>
        <mrna_strand>TATGTATATTATGGCATCAGATGGGTCTATTTTATCTGCGCCGGTGGCTAAACCTACCCCTCATAAACCTCCTAAGTGTTCGGATTGTGCTCCTCTTTTTATGAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATATCAGATGCGTAATGCTGGCGCTGTTATCCACAGTCATGGAATGGAATCCTGTCTTGTAACGATGCTCAATCCACTAGCAAAAGAATTTCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACTCATATGGAAATGATAAAAGGAATTCAAGGGCATGGTTACTATGACGAACTTGTGGTTCCTATCATAGAGAACACTGCATATGAGAGAGAACTCACAGAATCTCTTGCTGAAGCT...............................................................................................................................................................................................................ATCAAAGCTTACCCAAAAACAACAGCTGTGCTGGTCCGCAACCATGGTATATATGTATGGGGAGATTCTTGGATCAGCGCTAAAACACAG..........................................................................................................................................................................................................................................................TCTGAGTGCTACCACTACCTCTTTGATGCTGCAATTAAACTTCATCAATTAGGAATTGACTGGACAACACCAGCTCATGGTCCCATTCAGAATGCAAAAATATCTGCACTTGCTCCAAATGGCAGCATAAAGTCATCAAGG...............................................................................................................CGGTGCATCGTTTTGGATATCGAAGGAACCACTACCCCAATATCATTTGTTACTGATGTTCTATTCCCTTATGCACGTAATAATGTTGGGAGACATTTGGATGCCACATATGATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E376563" ref_strand="+" ref_description="SGN-E376563 [TUS-17-P15]">
      <seq>gaattcaagggcatggttactatgatgaacttgtggttcctatcatagagaacactgcatatgagagagaactcacagaatctcttgctgaagctatcaaagcttacccgaaaacgacagctgtgctggttcgcaaccatggtatatatgtatggggagattcttggatcagcgctaaaacacagtctgagtgctaccactacctctttgatgctgcaattaaactacatcaattaggaattgactggacaacaccagctcatggtcccattcagaatgcaaaaatatctgcacttgctccaaatggcagcataaagccatcaaggcggtgcatcgttttggatatcgaaggaactactactgcaatatcatttgttactgaggttctattcccttatgcacgtaataatgttgggaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="68088" stop="66502"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67788" g_stop="67694" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="95" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="67693" i_stop="67487" i_length="207">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="67486" g_stop="67397" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="96" r_stop="185" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="67396" i_stop="67147" i_length="250">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67146" g_stop="67006" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="326" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="67005" i_stop="66895" i_length="111">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="66894" g_stop="66802" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="327" r_stop="419" r_length="93" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E376563" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>419</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E376563" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67788" e_stop="67694"/>
          <exon e_start="67486" e_stop="67397"/>
          <exon e_start="67146" e_stop="67006"/>
          <exon e_start="66894" e_stop="66802"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATTCAAGGGCATGGTTACTATGATGAACTTGTGGTTCCTATCATAGAGAACACTGCATATGAGAGAGAACTCACAGAATCTCTTGCTGAAGCTGTAAGCGTCTCCCTCTTCAAAAAGTCACACCCTTCCATTGTGTATCTGTACTTGTTTAGTTTTTTTACTGCTGCTTTAACTTAGTTTTTAGATACTTGTACTGGAATTTCTATAAGTACATCAACTCCATTCCTGTTTTTGTTTGGCTATGATCACCAAACATTGTGCTAACAGTTTCCACTTGAACTTTTTTTCCATGTTGAACAGATCAAAGCTTACCCGAAAACGACAGCTGTGCTGGTTCGCAACCATGGTATATATGTATGGGGAGATTCTTGGATCAGCGCTAAAACACAGGTTTGTGTCATGGCTTATATTAGGAGGGGAGGGGGAGGGTTTGACATGGTTAGGTAGCAGATTTTAGAACTAATAAGATTAACTTAACTTGTGTTAGTAAGTTAAGGATGACCTCTGAAGGAGTTTCTACGTACATCTTGTAGTCTACTTAAAAATGTACATATGGAAACAGTCTTCAGATCAATTAGTTTAATGTATCTGAGATTTATGTTTCATTTGGCACTCTTCTAACTGACATACTATCTTCCAGTCTGAGTGCTACCACTACCTCTTTGATGCTGCAATTAAACTACATCAATTAGGAATTGACTGGACAACACCAGCTCATGGTCCCATTCAGAATGCAAAAATATCTGCACTTGCTCCAAATGGCAGCATAAAGCCATCAAGGGTAAGCACCGCAACAGTTTAGACTATTCTCTTACTTTCTTAAAATCGAAAGTAGGTGTTTCCATTGAATTCTTATTGTTGTCTGCATTGTGATATATATACTTTCTTGCAGCGGTGCATCGTTTTGGATATCGAAGGAACTACTACTCCAATATCATTTGTTACTGAGGTTCTATTCCCTTATGCACGTAATAATGTTGGGAGA</genome_strand>
        <mrna_strand>GAATTCAAGGGCATGGTTACTATGATGAACTTGTGGTTCCTATCATAGAGAACACTGCATATGAGAGAGAACTCACAGAATCTCTTGCTGAAGCT...............................................................................................................................................................................................................ATCAAAGCTTACCCGAAAACGACAGCTGTGCTGGTTCGCAACCATGGTATATATGTATGGGGAGATTCTTGGATCAGCGCTAAAACACAG..........................................................................................................................................................................................................................................................TCTGAGTGCTACCACTACCTCTTTGATGCTGCAATTAAACTACATCAATTAGGAATTGACTGGACAACACCAGCTCATGGTCCCATTCAGAATGCAAAAATATCTGCACTTGCTCCAAATGGCAGCATAAAGCCATCAAGG...............................................................................................................CGGTGCATCGTTTTGGATATCGAAGGAACTACTACTGCAATATCATTTGTTACTGAGGTTCTATTCCCTTATGCACGTAATAATGTTGGGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E698044" ref_strand="+" ref_description="SGN-E698044 [FA05AD02]">
      <seq>ctttagtcaagcatatttggaaggtgacaaggtcaaagagaccaagtccttaatcgctgagctttgccgtcatttctacaatcagggatgggtttccggcaccggcggcagcatcaccattaaagtacatgatgaatccgttcctaaatccgaacaacttatcgttatgtctccttctggggtgcaaaaggaaaggatggtggatgaggatatgtatattatgtcatcagatgggtctattttatctgcaccggtggctaaacctacccctcataaacctcctaagtgttctgattgtgcgcctctttttatgaaggcatatctgatgcgtaatgctggtgctgttatccacagtcatggaatggaatcctgtcttgtaacgatgctcaatccactagcaaaagaatttcggatcactcatatggaaatgataaaaggaattcaagggcatggttactatgatgaacttgtggttcctatcatagagaacactgcatatgagagagaactcacagaatctcttgctgaagctatcaaagcttacccgaaaacgacagctgtgctggttcgcaaccatggtatatatgtatggggagattcttggatcagcgctaaaacacagtctgagtgctaccactacctctttgatgctgcaattaaactacatcaattaggaattgactggacaacaccagctcatggtcccattcagaatgcaaaaatatctgcacttgctccaaatggcagcataaagccatcaaggcggtgcatcgttttggatatcgaaggaactactactccaatatcatttggtactgaggttctattccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="69828" stop="66527"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69533" g_stop="69354" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="179" r_length="179" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69353" i_stop="69268" i_length="86">
            <donor d_prob="0.779" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69267" g_stop="69131" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="316" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69130" i_stop="68446" i_length="685">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="68445" g_stop="68350" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="412" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="68349" i_stop="67814" i_length="536">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67813" g_stop="67694" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="413" r_stop="532" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="67693" i_stop="67487" i_length="207">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="67486" g_stop="67397" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="533" r_stop="622" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="67396" i_stop="67147" i_length="250">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="67146" g_stop="67006" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="623" r_stop="763" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="67005" i_stop="66895" i_length="111">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="66894" g_stop="66827" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="764" r_stop="831" r_length="68" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E698044" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>832</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E698044" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69533" e_stop="69354"/>
          <exon e_start="69267" e_stop="69131"/>
          <exon e_start="68445" e_stop="68350"/>
          <exon e_start="67813" e_stop="67694"/>
          <exon e_start="67486" e_stop="67397"/>
          <exon e_start="67146" e_stop="67006"/>
          <exon e_start="66894" e_stop="66827"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACCAGTCAAGCATATTTGGAAGGTGACAAGGTCAAAGAGACCAAGTCCTTAATCGCTGAGCTTTGCCGTCATTTCTACAATCAGGGATGGGTTTCCGGCACCGGCGGCAGCATCACCATTAAAGTACATGATGAATCCGTTCCTAAATCCGAACAACTTATCGTTATGTCTCCTTCTGGTGAGAAGAACCCGTTTACGATCTTACCCAACTTTTTAATTTTTGGGTTTTGTTTGAGTTTTTTGTTGATGGGTTTTTTTTGATAGGGGTGCAAAAGGAAAGGATGGTGGATGAGGATATGTATATTATGTCATCAGATGGGTCTATTTTATCTGCACCGGTGGCTAAACCTACCCCTCATAAACCTCCTAAGTGTTCTGATTGTGCGCCTCTTTTTATGAAGGTATAGAGGTTTCTATAATATGATGAAACAATAGTTGTTGTAGTATTGTAAATTGAAGTTTTACCAATTTGAAAAGTTGTGGAACTAAGGCCTACTGGAAGTTGAATTGTTGTTTTTGGTTAAAATGCTGAAGCTAATTGAAGTTGGTGTTTATTCTCAGCTGTCTAAACTTCTTAGTTGCATAGAAAAAGATGTTATTTTTATCCGGCGGATAATTGTTTTGCAGTCATGTCTATTTTGAAATATCGAAAACAGGTACTACCTTCCAAGGTAGGGGTATGGTTGACTACTCTCTCCTGACCTCACTTGTGGGATTAGATTACACTGGGATGTTGTTGTTGTATTGTATTTGTTCTTTCTCAGTGTAATTGTTATGTTATCCGTAGTCCTTTCTTTGTTTTTGTCTAGCTCAACAAACTTAGCATATTTCATATCTCGCGGTATCATGTTATTATTTCTCTGCTGCCATCTTTTGAATTTGTTTTGTCTCTCTAAATAATCTAGTAACAGCCAGGATCCATGATTTTTTGTGTTGTAGACTGCAGTTACTGAGATATAGCATGACTTCTTTGGAATGGAGAGTGTGATCTCATATTAGTTGATCTATAAATAAATGATTCTCTTTTTCTTTTTGATTGACTATTCTACTCCGCTGATTGTAATTTTTTTCTTTTTTTTTCCTCAGGCATATCTGATGCGTAATGCTGGTGCTGTTATCCACAGTCATGGAATGGAATCCTGTCTTGTAACGATGCTCAATCCACTAGCAAAAGAATTTCGGGTAAACATGCTACAAATTTTTGTGAAGTTAGCTACATCTTGATGTGATTCCGATAACATGTTTTTGAGTCATCAAGAAAAAAGAGACTCGGTAATGCTGAGCTTCAAGCATTCAATTCAGTGCGTGTTATGCTGACTACTGATATTATGTCTTTTTATTTGAGAGTAAGAATTTTCTTTCAAATAGAGCAACTTTTGCTTTTCCATACGTTATAAGAAGTGTAATCCTTATGCATCTTCCCTTTGCCTGCATCTGTATAGGCGAGACTTTCTTTATAAATTTATTTATGTAGTTACTTCATGTAGCCGACACAACTAGTTTTGGAATTGAGGCATAAGTGATTGATCTCTTGATATCATTTGCATTTGAAACTTCCTTTTTACGAATGTATAGAGTTGCTATTGTCTCTATATCCTCCACCTAATTCCCCTAGCTCAATTGATAATATTTTAAAGATTTAATTCCGCATTGTAAATTACTGAAACCTATTGTTATTTTTCATCTTATTCACTATTCGTTGTTGCTTTGATTGACAGATCACTCATATGGAAATGATAAAAGGAATTCAAGGGCATGGTTACTATGATGAACTTGTGGTTCCTATCATAGAGAACACTGCATATGAGAGAGAACTCACAGAATCTCTTGCTGAAGCTGTAAGCGTCTCCCTCTTCAAAAAGTCACACCCTTCCATTGTGTATCTGTACTTGTTTAGTTTTTTTACTGCTGCTTTAACTTAGTTTTTAGATACTTGTACTGGAATTTCTATAAGTACATCAACTCCATTCCTGTTTTTGTTTGGCTATGATCACCAAACATTGTGCTAACAGTTTCCACTTGAACTTTTTTTCCATGTTGAACAGATCAAAGCTTACCCGAAAACGACAGCTGTGCTGGTTCGCAACCATGGTATATATGTATGGGGAGATTCTTGGATCAGCGCTAAAACACAGGTTTGTGTCATGGCTTATATTAGGAGGGGAGGGGGAGGGTTTGACATGGTTAGGTAGCAGATTTTAGAACTAATAAGATTAACTTAACTTGTGTTAGTAAGTTAAGGATGACCTCTGAAGGAGTTTCTACGTACATCTTGTAGTCTACTTAAAAATGTACATATGGAAACAGTCTTCAGATCAATTAGTTTAATGTATCTGAGATTTATGTTTCATTTGGCACTCTTCTAACTGACATACTATCTTCCAGTCTGAGTGCTACCACTACCTCTTTGATGCTGCAATTAAACTACATCAATTAGGAATTGACTGGACAACACCAGCTCATGGTCCCATTCAGAATGCAAAAATATCTGCACTTGCTCCAAATGGCAGCATAAAGCCATCAAGGGTAAGCACCGCAACAGTTTAGACTATTCTCTTACTTTCTTAAAATCGAAAGTAGGTGTTTCCATTGAATTCTTATTGTTGTCTGCATTGTGATATATATACTTTCTTGCAGCGGTGCATCGTTTTGGATATCGAAGGAACTACTACTCCAATATCATTTGTTACTGAGGTTCTATTCCC</genome_strand>
        <mrna_strand>CTTT-AGTCAAGCATATTTGGAAGGTGACAAGGTCAAAGAGACCAAGTCCTTAATCGCTGAGCTTTGCCGTCATTTCTACAATCAGGGATGGGTTTCCGGCACCGGCGGCAGCATCACCATTAAAGTACATGATGAATCCGTTCCTAAATCCGAACAACTTATCGTTATGTCTCCTTCTG......................................................................................GGGTGCAAAAGGAAAGGATGGTGGATGAGGATATGTATATTATGTCATCAGATGGGTCTATTTTATCTGCACCGGTGGCTAAACCTACCCCTCATAAACCTCCTAAGTGTTCTGATTGTGCGCCTCTTTTTATGAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATATCTGATGCGTAATGCTGGTGCTGTTATCCACAGTCATGGAATGGAATCCTGTCTTGTAACGATGCTCAATCCACTAGCAAAAGAATTTCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACTCATATGGAAATGATAAAAGGAATTCAAGGGCATGGTTACTATGATGAACTTGTGGTTCCTATCATAGAGAACACTGCATATGAGAGAGAACTCACAGAATCTCTTGCTGAAGCT...............................................................................................................................................................................................................ATCAAAGCTTACCCGAAAACGACAGCTGTGCTGGTTCGCAACCATGGTATATATGTATGGGGAGATTCTTGGATCAGCGCTAAAACACAG..........................................................................................................................................................................................................................................................TCTGAGTGCTACCACTACCTCTTTGATGCTGCAATTAAACTACATCAATTAGGAATTGACTGGACAACACCAGCTCATGGTCCCATTCAGAATGCAAAAATATCTGCACTTGCTCCAAATGGCAGCATAAAGCCATCAAGG...............................................................................................................CGGTGCATCGTTTTGGATATCGAAGGAACTACTACTCCAATATCATTTGGTACTGAGGTTCTATTCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E288155" ref_strand="+" ref_description="SGN-E288155 [cLES-7-B15]">
      <seq>gcatggttactatgatgaacttgaggttcctatcatagagaacactgcatatgagagagaactcacagaatctcttgctgaagctatcaaagcttacccgaaaacgacagctgtgctggctcgcaaccatggtatatatgtattttgagatccttggatcancgctaaaacacaggctgagtgctaccactacctctttgatgctgcaattaaactacatcaattaggaattgactggacaacaccagctcatggtcccattcagaatgcagaaatatctgcacttgctccaaatggcagcataaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="68078" stop="66715"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67778" g_stop="67694" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="85" r_length="85" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="67693" i_stop="67487" i_length="207">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="67486" g_stop="67397" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="175" r_length="90" r_score="0.933"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="67396" i_stop="67147" i_length="250">
            <donor d_prob="0.000" d_score="0.90"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67146" g_stop="67015" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="307" r_length="132" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E288155" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>307</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E288155" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67778" e_stop="67694"/>
          <exon e_start="67486" e_stop="67397"/>
          <exon e_start="67146" e_stop="67015"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCATGGTTACTATGATGAACTTGTGGTTCCTATCATAGAGAACACTGCATATGAGAGAGAACTCACAGAATCTCTTGCTGAAGCTGTAAGCGTCTCCCTCTTCAAAAAGTCACACCCTTCCATTGTGTATCTGTACTTGTTTAGTTTTTTTACTGCTGCTTTAACTTAGTTTTTAGATACTTGTACTGGAATTTCTATAAGTACATCAACTCCATTCCTGTTTTTGTTTGGCTATGATCACCAAACATTGTGCTAACAGTTTCCACTTGAACTTTTTTTCCATGTTGAACAGATCAAAGCTTACCCGAAAACGACAGCTGTGCTGGTTCGCAACCATGGTATATATGTATGGGGAGATTCTTGGATCAGCGCTAAAACACAGGTTTGTGTCATGGCTTATATTAGGAGGGGAGGGGGAGGGTTTGACATGGTTAGGTAGCAGATTTTAGAACTAATAAGATTAACTTAACTTGTGTTAGTAAGTTAAGGATGACCTCTGAAGGAGTTTCTACGTACATCTTGTAGTCTACTTAAAAATGTACATATGGAAACAGTCTTCAGATCAATTAGTTTAATGTATCTGAGATTTATGTTTCATTTGGCACTCTTCTAACTGACATACTATCTTCCAGTCTGAGTGCTACCACTACCTCTTTGATGCTGCAATTAAACTACATCAATTAGGAATTGACTGGACAACACCAGCTCATGGTCCCATTCAGAATGCAAAAATATCTGCACTTGCTCCAAATGGCAGCATAAAG</genome_strand>
        <mrna_strand>GCATGGTTACTATGATGAACTTGAGGTTCCTATCATAGAGAACACTGCATATGAGAGAGAACTCACAGAATCTCTTGCTGAAGCT...............................................................................................................................................................................................................ATCAAAGCTTACCCGAAAACGACAGCTGTGCTGGCTCGCAACCATGGTATATATGTATTTTGAGATCCTTGGATCANCGCTAAAACACAG..........................................................................................................................................................................................................................................................GCTGAGTGCTACCACTACCTCTTTGATGCTGCAATTAAACTACATCAATTAGGAATTGACTGGACAACACCAGCTCATGGTCCCATTCAGAATGCAGAAATATCTGCACTTGCTCCAAATGGCAGCATAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E739745" ref_strand="+" ref_description="SGN-E739745 [LC18CG07]">
      <seq>cggtattagattacactgggatgttgttgttgtattgtatttgttctttctcagtgtaattgttatgttatccgtagtcctttctttgtttttgtctagctcaacaaacttagcatatttcatatctcgcggtatcatgttattatttctctgctgccatcttttgaatttgttttgtctctctaaataatctagtaacagccaggatccatgattttttgtgttgtagactgcagttactgagatatagcatgacttctttggaatggagagtgtgatctcatattagttgatctataaataaatgattctctttttctttttgattgactattctactccgctgattgtaatttttttctttttttttcctcaggcatatctgatgcgtaatgctggtgctgttatccacagtcatggaatggaatcctgtcttgtaacgatgctcaatccactagcaaaagaatttcggatcactcatatggaaatgataaaaggaattcaagggcatggttactatgatgaacttgtggttcctatcatagagaacactgcatatgagagagaactcacagaatctcttgctgaagctatcaaagcttacccgaaaacgacagctgtgctggttcgcaaccatggtatatatgtatggggagattcttggatcagcgctaaaacacagtctgagtgctaccactacctcttttgatgctgcaattaaactacatcaattaagaattgactggacaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="69120" stop="66780"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68821" g_stop="68350" g_length="472"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="472" r_length="472" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68349" i_stop="67814" i_length="536">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="67813" g_stop="67694" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="473" r_stop="592" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="67693" i_stop="67487" i_length="207">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67486" g_stop="67397" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="593" r_stop="682" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="67396" i_stop="67147" i_length="250">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67146" g_stop="67080" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="683" r_stop="750" r_length="68" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E739745" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>749</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E739745" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68821" e_stop="68350"/>
          <exon e_start="67813" e_stop="67694"/>
          <exon e_start="67486" e_stop="67397"/>
          <exon e_start="67146" e_stop="67080"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGATTAGATTACACTGGGATGTTGTTGTTGTATTGTATTTGTTCTTTCTCAGTGTAATTGTTATGTTATCCGTAGTCCTTTCTTTGTTTTTGTCTAGCTCAACAAACTTAGCATATTTCATATCTCGCGGTATCATGTTATTATTTCTCTGCTGCCATCTTTTGAATTTGTTTTGTCTCTCTAAATAATCTAGTAACAGCCAGGATCCATGATTTTTTGTGTTGTAGACTGCAGTTACTGAGATATAGCATGACTTCTTTGGAATGGAGAGTGTGATCTCATATTAGTTGATCTATAAATAAATGATTCTCTTTTTCTTTTTGATTGACTATTCTACTCCGCTGATTGTAATTTTTTTCTTTTTTTTTCCTCAGGCATATCTGATGCGTAATGCTGGTGCTGTTATCCACAGTCATGGAATGGAATCCTGTCTTGTAACGATGCTCAATCCACTAGCAAAAGAATTTCGGGTAAACATGCTACAAATTTTTGTGAAGTTAGCTACATCTTGATGTGATTCCGATAACATGTTTTTGAGTCATCAAGAAAAAAGAGACTCGGTAATGCTGAGCTTCAAGCATTCAATTCAGTGCGTGTTATGCTGACTACTGATATTATGTCTTTTTATTTGAGAGTAAGAATTTTCTTTCAAATAGAGCAACTTTTGCTTTTCCATACGTTATAAGAAGTGTAATCCTTATGCATCTTCCCTTTGCCTGCATCTGTATAGGCGAGACTTTCTTTATAAATTTATTTATGTAGTTACTTCATGTAGCCGACACAACTAGTTTTGGAATTGAGGCATAAGTGATTGATCTCTTGATATCATTTGCATTTGAAACTTCCTTTTTACGAATGTATAGAGTTGCTATTGTCTCTATATCCTCCACCTAATTCCCCTAGCTCAATTGATAATATTTTAAAGATTTAATTCCGCATTGTAAATTACTGAAACCTATTGTTATTTTTCATCTTATTCACTATTCGTTGTTGCTTTGATTGACAGATCACTCATATGGAAATGATAAAAGGAATTCAAGGGCATGGTTACTATGATGAACTTGTGGTTCCTATCATAGAGAACACTGCATATGAGAGAGAACTCACAGAATCTCTTGCTGAAGCTGTAAGCGTCTCCCTCTTCAAAAAGTCACACCCTTCCATTGTGTATCTGTACTTGTTTAGTTTTTTTACTGCTGCTTTAACTTAGTTTTTAGATACTTGTACTGGAATTTCTATAAGTACATCAACTCCATTCCTGTTTTTGTTTGGCTATGATCACCAAACATTGTGCTAACAGTTTCCACTTGAACTTTTTTTCCATGTTGAACAGATCAAAGCTTACCCGAAAACGACAGCTGTGCTGGTTCGCAACCATGGTATATATGTATGGGGAGATTCTTGGATCAGCGCTAAAACACAGGTTTGTGTCATGGCTTATATTAGGAGGGGAGGGGGAGGGTTTGACATGGTTAGGTAGCAGATTTTAGAACTAATAAGATTAACTTAACTTGTGTTAGTAAGTTAAGGATGACCTCTGAAGGAGTTTCTACGTACATCTTGTAGTCTACTTAAAAATGTACATATGGAAACAGTCTTCAGATCAATTAGTTTAATGTATCTGAGATTTATGTTTCATTTGGCACTCTTCTAACTGACATACTATCTTCCAGTCTGAGTGCTACCACTACCTC-TTTGATGCTGCAATTAAACTACATCAATTAGGAATTGACTGGACAA</genome_strand>
        <mrna_strand>CGGTATTAGATTACACTGGGATGTTGTTGTTGTATTGTATTTGTTCTTTCTCAGTGTAATTGTTATGTTATCCGTAGTCCTTTCTTTGTTTTTGTCTAGCTCAACAAACTTAGCATATTTCATATCTCGCGGTATCATGTTATTATTTCTCTGCTGCCATCTTTTGAATTTGTTTTGTCTCTCTAAATAATCTAGTAACAGCCAGGATCCATGATTTTTTGTGTTGTAGACTGCAGTTACTGAGATATAGCATGACTTCTTTGGAATGGAGAGTGTGATCTCATATTAGTTGATCTATAAATAAATGATTCTCTTTTTCTTTTTGATTGACTATTCTACTCCGCTGATTGTAATTTTTTTCTTTTTTTTTCCTCAGGCATATCTGATGCGTAATGCTGGTGCTGTTATCCACAGTCATGGAATGGAATCCTGTCTTGTAACGATGCTCAATCCACTAGCAAAAGAATTTCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACTCATATGGAAATGATAAAAGGAATTCAAGGGCATGGTTACTATGATGAACTTGTGGTTCCTATCATAGAGAACACTGCATATGAGAGAGAACTCACAGAATCTCTTGCTGAAGCT...............................................................................................................................................................................................................ATCAAAGCTTACCCGAAAACGACAGCTGTGCTGGTTCGCAACCATGGTATATATGTATGGGGAGATTCTTGGATCAGCGCTAAAACACAG..........................................................................................................................................................................................................................................................TCTGAGTGCTACCACTACCTCTTTTGATGCTGCAATTAAACTACATCAATTAAGAATTGACTGGACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E478940" ref_strand="+" ref_description="SGN-E478940 [cSTD-7-D20]">
      <seq>gcaaacggtgctctgaaaatggcaactaccagtcaagcatatttggaaggtgagaaggtcaaagagaccaagtccttaatcgctgagctctgccgtcatttctacaatcagggatgggtttccggcaccggcggaagcatcaccattaaagtacatgatgaatccgttcctaaatccgaacaacttatcgttatgtctccttctggggtgcaaaaggaaaggatggtggacgaggatatgtatattatggcatcagatgggtctattttatctgcgccggtggctaaacctacccctcataaacctcctaagtgttcggattgtgctcctctttttatgaaggcatatcagatgcgtaatgctggcgctgttatccacagtcatggaatggaatcctgtcttgtaacgatgctcaatccactagcaaaagaatttcggatcactcatatggaaatgataaaaggaattcaagggcatggttactatgacgaacttgtggttcctatcatagagaacactgcatatgagagagaactcacagaatctcttgctgaagctatcaaagcttacccaaaaaccaacagctgtgctggtccgcaaccatggtatatatgtatggnngagaattcttggatcagcgctaaaacacagtnctgagtgctaccactacctctnntgatgctgcattaaacttcatcaattangaattgactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="69858" stop="66825"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69558" g_stop="69354" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="205" r_length="205" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69353" i_stop="69268" i_length="86">
            <donor d_prob="0.779" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69267" g_stop="69131" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="342" r_length="137" r_score="0.964"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69130" i_stop="68446" i_length="685">
            <donor d_prob="0.958" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="68445" g_stop="68350" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="438" r_length="96" r_score="0.979"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="68349" i_stop="67814" i_length="536">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67813" g_stop="67694" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="439" r_stop="558" r_length="120" r_score="0.992"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="67693" i_stop="67487" i_length="207">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="67486" g_stop="67397" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="559" r_stop="651" r_length="93" r_score="0.889"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="67396" i_stop="67148" i_length="249">
            <donor d_prob="0.000" d_score="0.90"/>
            <acceptor a_prob="0.000" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="67147" g_stop="67085" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="652" r_stop="714" r_length="63" r_score="0.873"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E478940" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>711</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E478940" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69558" e_stop="69354"/>
          <exon e_start="69267" e_stop="69131"/>
          <exon e_start="68445" e_stop="68350"/>
          <exon e_start="67813" e_stop="67694"/>
          <exon e_start="67486" e_stop="67397"/>
          <exon e_start="67147" e_stop="67085"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAACGGAGCTCTGAAAATGGCGACTACCAGTCAAGCATATTTGGAAGGTGACAAGGTCAAAGAGACCAAGTCCTTAATCGCTGAGCTTTGCCGTCATTTCTACAATCAGGGATGGGTTTCCGGCACCGGCGGCAGCATCACCATTAAAGTACATGATGAATCCGTTCCTAAATCCGAACAACTTATCGTTATGTCTCCTTCTGGTGAGAAGAACCCGTTTACGATCTTACCCAACTTTTTAATTTTTGGGTTTTGTTTGAGTTTTTTGTTGATGGGTTTTTTTTGATAGGGGTGCAAAAGGAAAGGATGGTGGATGAGGATATGTATATTATGTCATCAGATGGGTCTATTTTATCTGCACCGGTGGCTAAACCTACCCCTCATAAACCTCCTAAGTGTTCTGATTGTGCGCCTCTTTTTATGAAGGTATAGAGGTTTCTATAATATGATGAAACAATAGTTGTTGTAGTATTGTAAATTGAAGTTTTACCAATTTGAAAAGTTGTGGAACTAAGGCCTACTGGAAGTTGAATTGTTGTTTTTGGTTAAAATGCTGAAGCTAATTGAAGTTGGTGTTTATTCTCAGCTGTCTAAACTTCTTAGTTGCATAGAAAAAGATGTTATTTTTATCCGGCGGATAATTGTTTTGCAGTCATGTCTATTTTGAAATATCGAAAACAGGTACTACCTTCCAAGGTAGGGGTATGGTTGACTACTCTCTCCTGACCTCACTTGTGGGATTAGATTACACTGGGATGTTGTTGTTGTATTGTATTTGTTCTTTCTCAGTGTAATTGTTATGTTATCCGTAGTCCTTTCTTTGTTTTTGTCTAGCTCAACAAACTTAGCATATTTCATATCTCGCGGTATCATGTTATTATTTCTCTGCTGCCATCTTTTGAATTTGTTTTGTCTCTCTAAATAATCTAGTAACAGCCAGGATCCATGATTTTTTGTGTTGTAGACTGCAGTTACTGAGATATAGCATGACTTCTTTGGAATGGAGAGTGTGATCTCATATTAGTTGATCTATAAATAAATGATTCTCTTTTTCTTTTTGATTGACTATTCTACTCCGCTGATTGTAATTTTTTTCTTTTTTTTTCCTCAGGCATATCTGATGCGTAATGCTGGTGCTGTTATCCACAGTCATGGAATGGAATCCTGTCTTGTAACGATGCTCAATCCACTAGCAAAAGAATTTCGGGTAAACATGCTACAAATTTTTGTGAAGTTAGCTACATCTTGATGTGATTCCGATAACATGTTTTTGAGTCATCAAGAAAAAAGAGACTCGGTAATGCTGAGCTTCAAGCATTCAATTCAGTGCGTGTTATGCTGACTACTGATATTATGTCTTTTTATTTGAGAGTAAGAATTTTCTTTCAAATAGAGCAACTTTTGCTTTTCCATACGTTATAAGAAGTGTAATCCTTATGCATCTTCCCTTTGCCTGCATCTGTATAGGCGAGACTTTCTTTATAAATTTATTTATGTAGTTACTTCATGTAGCCGACACAACTAGTTTTGGAATTGAGGCATAAGTGATTGATCTCTTGATATCATTTGCATTTGAAACTTCCTTTTTACGAATGTATAGAGTTGCTATTGTCTCTATATCCTCCACCTAATTCCCCTAGCTCAATTGATAATATTTTAAAGATTTAATTCCGCATTGTAAATTACTGAAACCTATTGTTATTTTTCATCTTATTCACTATTCGTTGTTGCTTTGATTGACAGATCACTCATATGGAAATGATAAAAGGAATTCAAGGGCATGGTTACTATGATGAACTTGTGGTTCCTATCATAGAGAACACTGCATATGAGAGAGAACTCACAGAATCTCTTGCTGAAGCTGTAAGCGTCTCCCTCTTCAAAAAGTCACACCCTTCCATTGTGTATCTGTACTTGTTTAGTTTTTTTACTGCTGCTTTAACTTAGTTTTTAGATACTTGTACTGGAATTTCTATAAGTACATCAACTCCATTCCTGTTTTTGTTTGGCTATGATCACCAAACATTGTGCTAACAGTTTCCACTTGAACTTTTTTTCCATGTTGAACAGATCAAAGCTTACCCGAAAA-CGACAGCTGTGCTGGTTCGCAACCATGGTATATATGTATGG-GGAG-ATTCTTGGATCAGCGCTAAAACACAGGTTTGTGTCATGGCTTATATTAGGAGGGGAGGGGGAGGGTTTGACATGGTTAGGTAGCAGATTTTAGAACTAATAAGATTAACTTAACTTGTGTTAGTAAGTTAAGGATGACCTCTGAAGGAGTTTCTACGTACATCTTGTAGTCTACTTAAAAATGTACATATGGAAACAGTCTTCAGATCAATTAGTTTAATGTATCTGAGATTTATGTTTCATTTGGCACTCTTCTAACTGACATACTATCTTCCAGTCTGAGTGCTACCACTACCTCT-TTGATGCTGCAATTAAACTACATCAATTAGGAATTGACTG</genome_strand>
        <mrna_strand>GCAAACGGTGCTCTGAAAATGGCAACTACCAGTCAAGCATATTTGGAAGGTGAGAAGGTCAAAGAGACCAAGTCCTTAATCGCTGAGCTCTGCCGTCATTTCTACAATCAGGGATGGGTTTCCGGCACCGGCGGAAGCATCACCATTAAAGTACATGATGAATCCGTTCCTAAATCCGAACAACTTATCGTTATGTCTCCTTCTG......................................................................................GGGTGCAAAAGGAAAGGATGGTGGACGAGGATATGTATATTATGGCATCAGATGGGTCTATTTTATCTGCGCCGGTGGCTAAACCTACCCCTCATAAACCTCCTAAGTGTTCGGATTGTGCTCCTCTTTTTATGAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATATCAGATGCGTAATGCTGGCGCTGTTATCCACAGTCATGGAATGGAATCCTGTCTTGTAACGATGCTCAATCCACTAGCAAAAGAATTTCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACTCATATGGAAATGATAAAAGGAATTCAAGGGCATGGTTACTATGACGAACTTGTGGTTCCTATCATAGAGAACACTGCATATGAGAGAGAACTCACAGAATCTCTTGCTGAAGCT...............................................................................................................................................................................................................ATCAAAGCTTACCCAAAAACCAACAGCTGTGCTGGTCCGCAACCATGGTATATATGTATGGNNGAGAATTCTTGGATCAGCGCTAAAACACAG.........................................................................................................................................................................................................................................................TNCTGAGTGCTACCACTACCTCTNNTGATGCTGC-ATTAAACTTCATCAATTANGAATTGACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E589528" ref_strand="+" ref_description="SGN-E589528 [43104]">
      <seq>cttctctcttcataataaagcaaatatggctgcggcatcagctgcccaattgactgcaaacggagctctgaaaatggcgactaccagtcaagcatatttggaaggtgacaaggtcaaagagaccaagtccttaatcgctgagctctgccgtcatttctacaatcagggatgggtttccggcaccggcggaagcatcaccattaaagtacatgatgaatccgttcctaaatccgaacaacttatcgttatgtctccttctggggtgcaaaaggaaaggatggtggacgaggatatgtatattatggcatcagatgggtctattttatctgcgccggtggctaaacctacccctcataaacctcctaagtgttctgattgtgctcctctttttatgaaggcatatcagatgcgtaatgctggcgctgttatccacagtcatggaatggaatcctgtcttgtaacgatgctcaatccactagcaaaagaatttcggatcactcatatggaaatgataaaaggaattcaagggcatggttactatgacgaacttgtggttcctatcatagagaacactgcatatgagagagaactcacagaatctcttngctgaagctatcaaagcttacccaaaaacaacagctgtgctggtccgcaaccatggtatatatgtatggggagattctgtggatcaggggctaaaacacagttctgagtgctaccactaacctctttgatgctgcaatttaaactttcatcaattaggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="69881" stop="66806"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69557" g_stop="69354" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="260" r_length="204" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69353" i_stop="69268" i_length="86">
            <donor d_prob="0.779" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69267" g_stop="69131" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="261" r_stop="397" r_length="137" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69130" i_stop="68446" i_length="685">
            <donor d_prob="0.958" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="68445" g_stop="68350" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="398" r_stop="493" r_length="96" r_score="0.979"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="68349" i_stop="67814" i_length="536">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67813" g_stop="67694" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="494" r_stop="614" r_length="121" r_score="0.975"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="67693" i_stop="67487" i_length="207">
            <donor d_prob="0.957" d_score="0.96"/>
            <acceptor a_prob="0.994" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="67486" g_stop="67397" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="615" r_stop="706" r_length="92" r_score="0.911"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="67396" i_stop="67148" i_length="249">
            <donor d_prob="0.000" d_score="0.90"/>
            <acceptor a_prob="0.000" a_score="0.83"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="67147" g_stop="67092" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="707" r_stop="765" r_length="59" r_score="0.857"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E589528" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>703</cumulative_length_of_scored_exons>
        <coverage percentage="0.919" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E589528" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69557" e_stop="69354"/>
          <exon e_start="69267" e_stop="69131"/>
          <exon e_start="68445" e_stop="68350"/>
          <exon e_start="67813" e_stop="67694"/>
          <exon e_start="67486" e_stop="67397"/>
          <exon e_start="67147" e_stop="67092"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAACGGAGCTCTGAAAATGGCGACTACCAGTCAAGCATATTTGGAAGGTGACAAGGTCAAAGAGACCAAGTCCTTAATCGCTGAGCTTTGCCGTCATTTCTACAATCAGGGATGGGTTTCCGGCACCGGCGGCAGCATCACCATTAAAGTACATGATGAATCCGTTCCTAAATCCGAACAACTTATCGTTATGTCTCCTTCTGGTGAGAAGAACCCGTTTACGATCTTACCCAACTTTTTAATTTTTGGGTTTTGTTTGAGTTTTTTGTTGATGGGTTTTTTTTGATAGGGGTGCAAAAGGAAAGGATGGTGGATGAGGATATGTATATTATGTCATCAGATGGGTCTATTTTATCTGCACCGGTGGCTAAACCTACCCCTCATAAACCTCCTAAGTGTTCTGATTGTGCGCCTCTTTTTATGAAGGTATAGAGGTTTCTATAATATGATGAAACAATAGTTGTTGTAGTATTGTAAATTGAAGTTTTACCAATTTGAAAAGTTGTGGAACTAAGGCCTACTGGAAGTTGAATTGTTGTTTTTGGTTAAAATGCTGAAGCTAATTGAAGTTGGTGTTTATTCTCAGCTGTCTAAACTTCTTAGTTGCATAGAAAAAGATGTTATTTTTATCCGGCGGATAATTGTTTTGCAGTCATGTCTATTTTGAAATATCGAAAACAGGTACTACCTTCCAAGGTAGGGGTATGGTTGACTACTCTCTCCTGACCTCACTTGTGGGATTAGATTACACTGGGATGTTGTTGTTGTATTGTATTTGTTCTTTCTCAGTGTAATTGTTATGTTATCCGTAGTCCTTTCTTTGTTTTTGTCTAGCTCAACAAACTTAGCATATTTCATATCTCGCGGTATCATGTTATTATTTCTCTGCTGCCATCTTTTGAATTTGTTTTGTCTCTCTAAATAATCTAGTAACAGCCAGGATCCATGATTTTTTGTGTTGTAGACTGCAGTTACTGAGATATAGCATGACTTCTTTGGAATGGAGAGTGTGATCTCATATTAGTTGATCTATAAATAAATGATTCTCTTTTTCTTTTTGATTGACTATTCTACTCCGCTGATTGTAATTTTTTTCTTTTTTTTTCCTCAGGCATATCTGATGCGTAATGCTGGTGCTGTTATCCACAGTCATGGAATGGAATCCTGTCTTGTAACGATGCTCAATCCACTAGCAAAAGAATTTCGGGTAAACATGCTACAAATTTTTGTGAAGTTAGCTACATCTTGATGTGATTCCGATAACATGTTTTTGAGTCATCAAGAAAAAAGAGACTCGGTAATGCTGAGCTTCAAGCATTCAATTCAGTGCGTGTTATGCTGACTACTGATATTATGTCTTTTTATTTGAGAGTAAGAATTTTCTTTCAAATAGAGCAACTTTTGCTTTTCCATACGTTATAAGAAGTGTAATCCTTATGCATCTTCCCTTTGCCTGCATCTGTATAGGCGAGACTTTCTTTATAAATTTATTTATGTAGTTACTTCATGTAGCCGACACAACTAGTTTTGGAATTGAGGCATAAGTGATTGATCTCTTGATATCATTTGCATTTGAAACTTCCTTTTTACGAATGTATAGAGTTGCTATTGTCTCTATATCCTCCACCTAATTCCCCTAGCTCAATTGATAATATTTTAAAGATTTAATTCCGCATTGTAAATTACTGAAACCTATTGTTATTTTTCATCTTATTCACTATTCGTTGTTGCTTTGATTGACAGATCACTCATATGGAAATGATAAAAGGAATTCAAGGGCATGGTTACTATGATGAACTTGTGGTTCCTATCATAGAGAACACTGCATATGAGAGAGAACTCACAGAATCTCTT-GCTGAAGCTGTAAGCGTCTCCCTCTTCAAAAAGTCACACCCTTCCATTGTGTATCTGTACTTGTTTAGTTTTTTTACTGCTGCTTTAACTTAGTTTTTAGATACTTGTACTGGAATTTCTATAAGTACATCAACTCCATTCCTGTTTTTGTTTGGCTATGATCACCAAACATTGTGCTAACAGTTTCCACTTGAACTTTTTTTCCATGTTGAACAGATCAAAGCTTACCCGAAAACGACAGCTGTGCTGGTTCGCAACCATGGTATATATGTATGGGGAGATTCT-TGGATCA-GCGCTAAAACACAGGTTTGTGTCATGGCTTATATTAGGAGGGGAGGGGGAGGGTTTGACATGGTTAGGTAGCAGATTTTAGAACTAATAAGATTAACTTAACTTGTGTTAGTAAGTTAAGGATGACCTCTGAAGGAGTTTCTACGTACATCTTGTAGTCTACTTAAAAATGTACATATGGAAACAGTCTTCAGATCAATTAGTTTAATGTATCTGAGATTTATGTTTCATTTGGCACTCTTCTAACTGACATACTATCTTCCAGTCTGAGTGCTACCACT-ACCTCTTTGATGCTGCAA-TTAAAC-TACATCAATTAGGAA</genome_strand>
        <mrna_strand>CAAACGGAGCTCTGAAAATGGCGACTACCAGTCAAGCATATTTGGAAGGTGACAAGGTCAAAGAGACCAAGTCCTTAATCGCTGAGCTCTGCCGTCATTTCTACAATCAGGGATGGGTTTCCGGCACCGGCGGAAGCATCACCATTAAAGTACATGATGAATCCGTTCCTAAATCCGAACAACTTATCGTTATGTCTCCTTCTG......................................................................................GGGTGCAAAAGGAAAGGATGGTGGACGAGGATATGTATATTATGGCATCAGATGGGTCTATTTTATCTGCGCCGGTGGCTAAACCTACCCCTCATAAACCTCCTAAGTGTTCTGATTGTGCTCCTCTTTTTATGAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATATCAGATGCGTAATGCTGGCGCTGTTATCCACAGTCATGGAATGGAATCCTGTCTTGTAACGATGCTCAATCCACTAGCAAAAGAATTTCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACTCATATGGAAATGATAAAAGGAATTCAAGGGCATGGTTACTATGACGAACTTGTGGTTCCTATCATAGAGAACACTGCATATGAGAGAGAACTCACAGAATCTCTTNGCTGAAGCT...............................................................................................................................................................................................................ATCAAAGCTTACCCAAAAACAACAGCTGTGCTGGTCCGCAACCATGGTATATATGTATGGGGAGATTCTGTGGATCAGGGGCTAAAACACAG.........................................................................................................................................................................................................................................................TTCTGAGTGCTACCACTAACCTCTTTGATGCTGCAATTTAAACTTTCATCAATTAGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E480240" ref_strand="+" ref_description="SGN-E480240 [cSTD-13-C8]">
      <seq>catcagcagcccaattgactgcaaacggtgctctgaaaatggcaactaccagtcaagcatatttggaaggtgagaaggtcaaagagaccaagtccttaatcgctgagctctgccgtcatttctacaatcagggatgggtttccggcaccggcggaagcatcaccattaaagtacatgatgaatccgttcctaaatccgaacaacttatcgttatgtctccttctggggtgcaaaaggaaaggatggtggacgaggatatgtatattatggcatcagatgggtctattttatctgcgccggtggctaaacctacccctcataaacctcctaagtgttcggattgtgctcctctttttatgaaggcatatcagatgcgtaatgctggcgctgttatccacagtcatggaatggaatcctgtcttgtaacgatgctcaatccactagcaaaagaatttcggatcactcatatggaaatgataaaaggaattcaagggcatggttactatgacgaacttgtggttcctatcatagagaacactgcatatgagagagaactcacagaatctcttgctgaagctatcaaagcttacccaaaaacaacagctgtgctggtccgcaaccatggtatatatgtatggggagattcttggatcagcgctaaaacacagtctgagtgctaccactacctctttgatgctgcaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="69862" stop="66811"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69557" g_stop="69354" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="225" r_length="204" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69353" i_stop="69268" i_length="86">
            <donor d_prob="0.779" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69267" g_stop="69131" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="226" r_stop="362" r_length="137" r_score="0.964"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69130" i_stop="68446" i_length="685">
            <donor d_prob="0.958" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="68445" g_stop="68350" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="458" r_length="96" r_score="0.979"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="68349" i_stop="67814" i_length="536">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67813" g_stop="67694" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="459" r_stop="578" r_length="120" r_score="0.992"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="67693" i_stop="67487" i_length="207">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="67486" g_stop="67397" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="579" r_stop="668" r_length="90" r_score="0.967"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="67396" i_stop="67147" i_length="250">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="67146" g_stop="67111" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="669" r_stop="704" r_length="36" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E480240" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>683</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E480240" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69557" e_stop="69354"/>
          <exon e_start="69267" e_stop="69131"/>
          <exon e_start="68445" e_stop="68350"/>
          <exon e_start="67813" e_stop="67694"/>
          <exon e_start="67486" e_stop="67397"/>
          <exon e_start="67146" e_stop="67111"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAACGGAGCTCTGAAAATGGCGACTACCAGTCAAGCATATTTGGAAGGTGACAAGGTCAAAGAGACCAAGTCCTTAATCGCTGAGCTTTGCCGTCATTTCTACAATCAGGGATGGGTTTCCGGCACCGGCGGCAGCATCACCATTAAAGTACATGATGAATCCGTTCCTAAATCCGAACAACTTATCGTTATGTCTCCTTCTGGTGAGAAGAACCCGTTTACGATCTTACCCAACTTTTTAATTTTTGGGTTTTGTTTGAGTTTTTTGTTGATGGGTTTTTTTTGATAGGGGTGCAAAAGGAAAGGATGGTGGATGAGGATATGTATATTATGTCATCAGATGGGTCTATTTTATCTGCACCGGTGGCTAAACCTACCCCTCATAAACCTCCTAAGTGTTCTGATTGTGCGCCTCTTTTTATGAAGGTATAGAGGTTTCTATAATATGATGAAACAATAGTTGTTGTAGTATTGTAAATTGAAGTTTTACCAATTTGAAAAGTTGTGGAACTAAGGCCTACTGGAAGTTGAATTGTTGTTTTTGGTTAAAATGCTGAAGCTAATTGAAGTTGGTGTTTATTCTCAGCTGTCTAAACTTCTTAGTTGCATAGAAAAAGATGTTATTTTTATCCGGCGGATAATTGTTTTGCAGTCATGTCTATTTTGAAATATCGAAAACAGGTACTACCTTCCAAGGTAGGGGTATGGTTGACTACTCTCTCCTGACCTCACTTGTGGGATTAGATTACACTGGGATGTTGTTGTTGTATTGTATTTGTTCTTTCTCAGTGTAATTGTTATGTTATCCGTAGTCCTTTCTTTGTTTTTGTCTAGCTCAACAAACTTAGCATATTTCATATCTCGCGGTATCATGTTATTATTTCTCTGCTGCCATCTTTTGAATTTGTTTTGTCTCTCTAAATAATCTAGTAACAGCCAGGATCCATGATTTTTTGTGTTGTAGACTGCAGTTACTGAGATATAGCATGACTTCTTTGGAATGGAGAGTGTGATCTCATATTAGTTGATCTATAAATAAATGATTCTCTTTTTCTTTTTGATTGACTATTCTACTCCGCTGATTGTAATTTTTTTCTTTTTTTTTCCTCAGGCATATCTGATGCGTAATGCTGGTGCTGTTATCCACAGTCATGGAATGGAATCCTGTCTTGTAACGATGCTCAATCCACTAGCAAAAGAATTTCGGGTAAACATGCTACAAATTTTTGTGAAGTTAGCTACATCTTGATGTGATTCCGATAACATGTTTTTGAGTCATCAAGAAAAAAGAGACTCGGTAATGCTGAGCTTCAAGCATTCAATTCAGTGCGTGTTATGCTGACTACTGATATTATGTCTTTTTATTTGAGAGTAAGAATTTTCTTTCAAATAGAGCAACTTTTGCTTTTCCATACGTTATAAGAAGTGTAATCCTTATGCATCTTCCCTTTGCCTGCATCTGTATAGGCGAGACTTTCTTTATAAATTTATTTATGTAGTTACTTCATGTAGCCGACACAACTAGTTTTGGAATTGAGGCATAAGTGATTGATCTCTTGATATCATTTGCATTTGAAACTTCCTTTTTACGAATGTATAGAGTTGCTATTGTCTCTATATCCTCCACCTAATTCCCCTAGCTCAATTGATAATATTTTAAAGATTTAATTCCGCATTGTAAATTACTGAAACCTATTGTTATTTTTCATCTTATTCACTATTCGTTGTTGCTTTGATTGACAGATCACTCATATGGAAATGATAAAAGGAATTCAAGGGCATGGTTACTATGATGAACTTGTGGTTCCTATCATAGAGAACACTGCATATGAGAGAGAACTCACAGAATCTCTTGCTGAAGCTGTAAGCGTCTCCCTCTTCAAAAAGTCACACCCTTCCATTGTGTATCTGTACTTGTTTAGTTTTTTTACTGCTGCTTTAACTTAGTTTTTAGATACTTGTACTGGAATTTCTATAAGTACATCAACTCCATTCCTGTTTTTGTTTGGCTATGATCACCAAACATTGTGCTAACAGTTTCCACTTGAACTTTTTTTCCATGTTGAACAGATCAAAGCTTACCCGAAAACGACAGCTGTGCTGGTTCGCAACCATGGTATATATGTATGGGGAGATTCTTGGATCAGCGCTAAAACACAGGTTTGTGTCATGGCTTATATTAGGAGGGGAGGGGGAGGGTTTGACATGGTTAGGTAGCAGATTTTAGAACTAATAAGATTAACTTAACTTGTGTTAGTAAGTTAAGGATGACCTCTGAAGGAGTTTCTACGTACATCTTGTAGTCTACTTAAAAATGTACATATGGAAACAGTCTTCAGATCAATTAGTTTAATGTATCTGAGATTTATGTTTCATTTGGCACTCTTCTAACTGACATACTATCTTCCAGTCTGAGTGCTACCACTACCTCTTTGATGCTGCAATT</genome_strand>
        <mrna_strand>CAAACGGTGCTCTGAAAATGGCAACTACCAGTCAAGCATATTTGGAAGGTGAGAAGGTCAAAGAGACCAAGTCCTTAATCGCTGAGCTCTGCCGTCATTTCTACAATCAGGGATGGGTTTCCGGCACCGGCGGAAGCATCACCATTAAAGTACATGATGAATCCGTTCCTAAATCCGAACAACTTATCGTTATGTCTCCTTCTG......................................................................................GGGTGCAAAAGGAAAGGATGGTGGACGAGGATATGTATATTATGGCATCAGATGGGTCTATTTTATCTGCGCCGGTGGCTAAACCTACCCCTCATAAACCTCCTAAGTGTTCGGATTGTGCTCCTCTTTTTATGAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATATCAGATGCGTAATGCTGGCGCTGTTATCCACAGTCATGGAATGGAATCCTGTCTTGTAACGATGCTCAATCCACTAGCAAAAGAATTTCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACTCATATGGAAATGATAAAAGGAATTCAAGGGCATGGTTACTATGACGAACTTGTGGTTCCTATCATAGAGAACACTGCATATGAGAGAGAACTCACAGAATCTCTTGCTGAAGCT...............................................................................................................................................................................................................ATCAAAGCTTACCCAAAAACAACAGCTGTGCTGGTCCGCAACCATGGTATATATGTATGGGGAGATTCTTGGATCAGCGCTAAAACACAG..........................................................................................................................................................................................................................................................TCTGAGTGCTACCACTACCTCTTTGATGCTGCAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E413655" ref_strand="+" ref_description="SGN-E413655 [STM-18-A8]">
      <seq>ctgaaaatggcgactaccagtcaagcatatttggaaggtgacaaggtcaaagagaccaagtccttaatcgctgagctctgccgtcatttctacaatcagggatgggtttccggcaccggcggaagcatcaccattaaagtacatgatgaatccgttcctaaatccgaacaacttatcgttatgtctccttctggggtgcaaaaggaaaggatggtggatgaggatatgtatattatggcatcagatgggtctattttatctgcgccggtggctaaacctacccctcataaacctcctaagtgttctgattgtgctcctctttttatgaaggcatatcagatgcgtaatgctggtgctgttatccacagtcatggaatggaatcctgccttgtaacgatgctcaatccactagcaaaagaatttcggatcactcatatggaaatgataaaaggaattcaagggcatggttactatgacgaacttgtggttcctatcatagagaacactgcatatgagagagaactcacagaatctcttgctgaagctatcaaagcttaccctaaaacaacagctgtgctggtccgcaaccatggtatatatgtatggggagattcttggatcagtgctaaaacacagtctgagtgctacca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="69846" stop="67089"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69546" g_stop="69354" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="193" r_length="193" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69353" i_stop="69268" i_length="86">
            <donor d_prob="0.779" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69267" g_stop="69131" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="194" r_stop="330" r_length="137" r_score="0.978"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69130" i_stop="68446" i_length="685">
            <donor d_prob="0.958" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="68445" g_stop="68350" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="331" r_stop="426" r_length="96" r_score="0.979"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="68349" i_stop="67814" i_length="536">
            <donor d_prob="0.935" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67813" g_stop="67694" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="427" r_stop="546" r_length="120" r_score="0.992"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="67693" i_stop="67487" i_length="207">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="67486" g_stop="67397" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="547" r_stop="636" r_length="90" r_score="0.956"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="67396" i_stop="67147" i_length="250">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="67146" g_stop="67133" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="637" r_stop="650" r_length="14" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E413655" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>650</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E413655" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69546" e_stop="69354"/>
          <exon e_start="69267" e_stop="69131"/>
          <exon e_start="68445" e_stop="68350"/>
          <exon e_start="67813" e_stop="67694"/>
          <exon e_start="67486" e_stop="67397"/>
          <exon e_start="67146" e_stop="67133"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGAAAATGGCGACTACCAGTCAAGCATATTTGGAAGGTGACAAGGTCAAAGAGACCAAGTCCTTAATCGCTGAGCTTTGCCGTCATTTCTACAATCAGGGATGGGTTTCCGGCACCGGCGGCAGCATCACCATTAAAGTACATGATGAATCCGTTCCTAAATCCGAACAACTTATCGTTATGTCTCCTTCTGGTGAGAAGAACCCGTTTACGATCTTACCCAACTTTTTAATTTTTGGGTTTTGTTTGAGTTTTTTGTTGATGGGTTTTTTTTGATAGGGGTGCAAAAGGAAAGGATGGTGGATGAGGATATGTATATTATGTCATCAGATGGGTCTATTTTATCTGCACCGGTGGCTAAACCTACCCCTCATAAACCTCCTAAGTGTTCTGATTGTGCGCCTCTTTTTATGAAGGTATAGAGGTTTCTATAATATGATGAAACAATAGTTGTTGTAGTATTGTAAATTGAAGTTTTACCAATTTGAAAAGTTGTGGAACTAAGGCCTACTGGAAGTTGAATTGTTGTTTTTGGTTAAAATGCTGAAGCTAATTGAAGTTGGTGTTTATTCTCAGCTGTCTAAACTTCTTAGTTGCATAGAAAAAGATGTTATTTTTATCCGGCGGATAATTGTTTTGCAGTCATGTCTATTTTGAAATATCGAAAACAGGTACTACCTTCCAAGGTAGGGGTATGGTTGACTACTCTCTCCTGACCTCACTTGTGGGATTAGATTACACTGGGATGTTGTTGTTGTATTGTATTTGTTCTTTCTCAGTGTAATTGTTATGTTATCCGTAGTCCTTTCTTTGTTTTTGTCTAGCTCAACAAACTTAGCATATTTCATATCTCGCGGTATCATGTTATTATTTCTCTGCTGCCATCTTTTGAATTTGTTTTGTCTCTCTAAATAATCTAGTAACAGCCAGGATCCATGATTTTTTGTGTTGTAGACTGCAGTTACTGAGATATAGCATGACTTCTTTGGAATGGAGAGTGTGATCTCATATTAGTTGATCTATAAATAAATGATTCTCTTTTTCTTTTTGATTGACTATTCTACTCCGCTGATTGTAATTTTTTTCTTTTTTTTTCCTCAGGCATATCTGATGCGTAATGCTGGTGCTGTTATCCACAGTCATGGAATGGAATCCTGTCTTGTAACGATGCTCAATCCACTAGCAAAAGAATTTCGGGTAAACATGCTACAAATTTTTGTGAAGTTAGCTACATCTTGATGTGATTCCGATAACATGTTTTTGAGTCATCAAGAAAAAAGAGACTCGGTAATGCTGAGCTTCAAGCATTCAATTCAGTGCGTGTTATGCTGACTACTGATATTATGTCTTTTTATTTGAGAGTAAGAATTTTCTTTCAAATAGAGCAACTTTTGCTTTTCCATACGTTATAAGAAGTGTAATCCTTATGCATCTTCCCTTTGCCTGCATCTGTATAGGCGAGACTTTCTTTATAAATTTATTTATGTAGTTACTTCATGTAGCCGACACAACTAGTTTTGGAATTGAGGCATAAGTGATTGATCTCTTGATATCATTTGCATTTGAAACTTCCTTTTTACGAATGTATAGAGTTGCTATTGTCTCTATATCCTCCACCTAATTCCCCTAGCTCAATTGATAATATTTTAAAGATTTAATTCCGCATTGTAAATTACTGAAACCTATTGTTATTTTTCATCTTATTCACTATTCGTTGTTGCTTTGATTGACAGATCACTCATATGGAAATGATAAAAGGAATTCAAGGGCATGGTTACTATGATGAACTTGTGGTTCCTATCATAGAGAACACTGCATATGAGAGAGAACTCACAGAATCTCTTGCTGAAGCTGTAAGCGTCTCCCTCTTCAAAAAGTCACACCCTTCCATTGTGTATCTGTACTTGTTTAGTTTTTTTACTGCTGCTTTAACTTAGTTTTTAGATACTTGTACTGGAATTTCTATAAGTACATCAACTCCATTCCTGTTTTTGTTTGGCTATGATCACCAAACATTGTGCTAACAGTTTCCACTTGAACTTTTTTTCCATGTTGAACAGATCAAAGCTTACCCGAAAACGACAGCTGTGCTGGTTCGCAACCATGGTATATATGTATGGGGAGATTCTTGGATCAGCGCTAAAACACAGGTTTGTGTCATGGCTTATATTAGGAGGGGAGGGGGAGGGTTTGACATGGTTAGGTAGCAGATTTTAGAACTAATAAGATTAACTTAACTTGTGTTAGTAAGTTAAGGATGACCTCTGAAGGAGTTTCTACGTACATCTTGTAGTCTACTTAAAAATGTACATATGGAAACAGTCTTCAGATCAATTAGTTTAATGTATCTGAGATTTATGTTTCATTTGGCACTCTTCTAACTGACATACTATCTTCCAGTCTGAGTGCTACCA</genome_strand>
        <mrna_strand>CTGAAAATGGCGACTACCAGTCAAGCATATTTGGAAGGTGACAAGGTCAAAGAGACCAAGTCCTTAATCGCTGAGCTCTGCCGTCATTTCTACAATCAGGGATGGGTTTCCGGCACCGGCGGAAGCATCACCATTAAAGTACATGATGAATCCGTTCCTAAATCCGAACAACTTATCGTTATGTCTCCTTCTG......................................................................................GGGTGCAAAAGGAAAGGATGGTGGATGAGGATATGTATATTATGGCATCAGATGGGTCTATTTTATCTGCGCCGGTGGCTAAACCTACCCCTCATAAACCTCCTAAGTGTTCTGATTGTGCTCCTCTTTTTATGAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATATCAGATGCGTAATGCTGGTGCTGTTATCCACAGTCATGGAATGGAATCCTGCCTTGTAACGATGCTCAATCCACTAGCAAAAGAATTTCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACTCATATGGAAATGATAAAAGGAATTCAAGGGCATGGTTACTATGACGAACTTGTGGTTCCTATCATAGAGAACACTGCATATGAGAGAGAACTCACAGAATCTCTTGCTGAAGCT...............................................................................................................................................................................................................ATCAAAGCTTACCCTAAAACAACAGCTGTGCTGGTCCGCAACCATGGTATATATGTATGGGGAGATTCTTGGATCAGTGCTAAAACACAG..........................................................................................................................................................................................................................................................TCTGAGTGCTACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E486460" ref_strand="+" ref_description="SGN-E486460 [cSTE-22-A2]">
      <seq>ctgaaaatggcgactaccagtcaagcatatttggaaggtgacaaggtcaaagagaccaagtccttaatcgctgagctctgccgtcatttctacaatcagggatgggtttccggcaccggcggaagcatcaccattaaagtacatgatgaatccgttcctaaatccgaacaacttatcgttatgtctccttctggggtgcaaaaggaaaggatggtggacgaggatatgtatattatggcatcagatgggtctattttatctgcgccggtggctaaacctacccctcataaacctcctaagtgttctgattgtgctcctctttttatgaaggcatatcagatgcgtaatgctggcgctgttatccacagtcatggaatggaatcctgtcttgtaacgatgctcaatccactagcaaaagaatttcggatcactcatatggaaatgataaaaggaattcaagggcatggttactatgacgaacttgtggttcctatcatagagaacactgcatatgagagagaactcacagaatctcttgctgaagctatcaaagcttacccaaaaacaacagctgtgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="69846" stop="67382"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69546" g_stop="69354" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="193" r_length="193" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69353" i_stop="69268" i_length="86">
            <donor d_prob="0.779" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69267" g_stop="69131" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="194" r_stop="330" r_length="137" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69130" i_stop="68446" i_length="685">
            <donor d_prob="0.958" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="68445" g_stop="68350" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="331" r_stop="426" r_length="96" r_score="0.979"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="68349" i_stop="67814" i_length="536">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67813" g_stop="67694" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="427" r_stop="546" r_length="120" r_score="0.992"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="67693" i_stop="67487" i_length="207">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="67486" g_stop="67455" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="547" r_stop="578" r_length="32" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E486460" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>578</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E486460" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69546" e_stop="69354"/>
          <exon e_start="69267" e_stop="69131"/>
          <exon e_start="68445" e_stop="68350"/>
          <exon e_start="67813" e_stop="67694"/>
          <exon e_start="67486" e_stop="67455"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGAAAATGGCGACTACCAGTCAAGCATATTTGGAAGGTGACAAGGTCAAAGAGACCAAGTCCTTAATCGCTGAGCTTTGCCGTCATTTCTACAATCAGGGATGGGTTTCCGGCACCGGCGGCAGCATCACCATTAAAGTACATGATGAATCCGTTCCTAAATCCGAACAACTTATCGTTATGTCTCCTTCTGGTGAGAAGAACCCGTTTACGATCTTACCCAACTTTTTAATTTTTGGGTTTTGTTTGAGTTTTTTGTTGATGGGTTTTTTTTGATAGGGGTGCAAAAGGAAAGGATGGTGGATGAGGATATGTATATTATGTCATCAGATGGGTCTATTTTATCTGCACCGGTGGCTAAACCTACCCCTCATAAACCTCCTAAGTGTTCTGATTGTGCGCCTCTTTTTATGAAGGTATAGAGGTTTCTATAATATGATGAAACAATAGTTGTTGTAGTATTGTAAATTGAAGTTTTACCAATTTGAAAAGTTGTGGAACTAAGGCCTACTGGAAGTTGAATTGTTGTTTTTGGTTAAAATGCTGAAGCTAATTGAAGTTGGTGTTTATTCTCAGCTGTCTAAACTTCTTAGTTGCATAGAAAAAGATGTTATTTTTATCCGGCGGATAATTGTTTTGCAGTCATGTCTATTTTGAAATATCGAAAACAGGTACTACCTTCCAAGGTAGGGGTATGGTTGACTACTCTCTCCTGACCTCACTTGTGGGATTAGATTACACTGGGATGTTGTTGTTGTATTGTATTTGTTCTTTCTCAGTGTAATTGTTATGTTATCCGTAGTCCTTTCTTTGTTTTTGTCTAGCTCAACAAACTTAGCATATTTCATATCTCGCGGTATCATGTTATTATTTCTCTGCTGCCATCTTTTGAATTTGTTTTGTCTCTCTAAATAATCTAGTAACAGCCAGGATCCATGATTTTTTGTGTTGTAGACTGCAGTTACTGAGATATAGCATGACTTCTTTGGAATGGAGAGTGTGATCTCATATTAGTTGATCTATAAATAAATGATTCTCTTTTTCTTTTTGATTGACTATTCTACTCCGCTGATTGTAATTTTTTTCTTTTTTTTTCCTCAGGCATATCTGATGCGTAATGCTGGTGCTGTTATCCACAGTCATGGAATGGAATCCTGTCTTGTAACGATGCTCAATCCACTAGCAAAAGAATTTCGGGTAAACATGCTACAAATTTTTGTGAAGTTAGCTACATCTTGATGTGATTCCGATAACATGTTTTTGAGTCATCAAGAAAAAAGAGACTCGGTAATGCTGAGCTTCAAGCATTCAATTCAGTGCGTGTTATGCTGACTACTGATATTATGTCTTTTTATTTGAGAGTAAGAATTTTCTTTCAAATAGAGCAACTTTTGCTTTTCCATACGTTATAAGAAGTGTAATCCTTATGCATCTTCCCTTTGCCTGCATCTGTATAGGCGAGACTTTCTTTATAAATTTATTTATGTAGTTACTTCATGTAGCCGACACAACTAGTTTTGGAATTGAGGCATAAGTGATTGATCTCTTGATATCATTTGCATTTGAAACTTCCTTTTTACGAATGTATAGAGTTGCTATTGTCTCTATATCCTCCACCTAATTCCCCTAGCTCAATTGATAATATTTTAAAGATTTAATTCCGCATTGTAAATTACTGAAACCTATTGTTATTTTTCATCTTATTCACTATTCGTTGTTGCTTTGATTGACAGATCACTCATATGGAAATGATAAAAGGAATTCAAGGGCATGGTTACTATGATGAACTTGTGGTTCCTATCATAGAGAACACTGCATATGAGAGAGAACTCACAGAATCTCTTGCTGAAGCTGTAAGCGTCTCCCTCTTCAAAAAGTCACACCCTTCCATTGTGTATCTGTACTTGTTTAGTTTTTTTACTGCTGCTTTAACTTAGTTTTTAGATACTTGTACTGGAATTTCTATAAGTACATCAACTCCATTCCTGTTTTTGTTTGGCTATGATCACCAAACATTGTGCTAACAGTTTCCACTTGAACTTTTTTTCCATGTTGAACAGATCAAAGCTTACCCGAAAACGACAGCTGTGCT</genome_strand>
        <mrna_strand>CTGAAAATGGCGACTACCAGTCAAGCATATTTGGAAGGTGACAAGGTCAAAGAGACCAAGTCCTTAATCGCTGAGCTCTGCCGTCATTTCTACAATCAGGGATGGGTTTCCGGCACCGGCGGAAGCATCACCATTAAAGTACATGATGAATCCGTTCCTAAATCCGAACAACTTATCGTTATGTCTCCTTCTG......................................................................................GGGTGCAAAAGGAAAGGATGGTGGACGAGGATATGTATATTATGGCATCAGATGGGTCTATTTTATCTGCGCCGGTGGCTAAACCTACCCCTCATAAACCTCCTAAGTGTTCTGATTGTGCTCCTCTTTTTATGAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATATCAGATGCGTAATGCTGGCGCTGTTATCCACAGTCATGGAATGGAATCCTGTCTTGTAACGATGCTCAATCCACTAGCAAAAGAATTTCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACTCATATGGAAATGATAAAAGGAATTCAAGGGCATGGTTACTATGACGAACTTGTGGTTCCTATCATAGAGAACACTGCATATGAGAGAGAACTCACAGAATCTCTTGCTGAAGCT...............................................................................................................................................................................................................ATCAAAGCTTACCCAAAAACAACAGCTGTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E441052" ref_strand="+" ref_description="SGN-E441052 [cSTA-29-C23]">
      <seq>ctggaaacggagctctgaaaatggcgactaccagtcaagcatatttggaaggtgacaaggtcaaagagaccaagtccttaatcgctgagctctgccgtcatttctacaatcagggatgggtttccggcaccggcggcagcatcaccattaaagtacatgatgaatccgttcctaaatcccaacaacttatccttatgtctccttctggggtgccaaaaggaaaggatggtggacgaggatatgtatattatggcatcagatgggtctattttatctgcgccggtggctaaacctacccctcataaacctcctaagtgttctgattgtgctcctctttttatgaaggcatatcagatgcctaatgctggtgcagttatccacagtcatggaatggaatcctgccttgtaacgatgctcaatccactagcaaaagaatttcggatcactcatatggaaatgataaaaggaattcaagggcatggttactatgacgaacttgtggttcctatcatagagaacactgcatatgagagagaactcacagaatctcttgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="69860" stop="67400"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69560" g_stop="69354" g_length="207"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="207" r_length="207" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69353" i_stop="69268" i_length="86">
            <donor d_prob="0.779" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69267" g_stop="69131" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="208" r_stop="345" r_length="138" r_score="0.956"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69130" i_stop="68446" i_length="685">
            <donor d_prob="0.958" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="68445" g_stop="68350" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="346" r_stop="441" r_length="96" r_score="0.958"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="68349" i_stop="67814" i_length="536">
            <donor d_prob="0.935" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67813" g_stop="67700" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="442" r_stop="555" r_length="114" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E441052" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E441052" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69560" e_stop="69354"/>
          <exon e_start="69267" e_stop="69131"/>
          <exon e_start="68445" e_stop="68350"/>
          <exon e_start="67813" e_stop="67700"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGCAAACGGAGCTCTGAAAATGGCGACTACCAGTCAAGCATATTTGGAAGGTGACAAGGTCAAAGAGACCAAGTCCTTAATCGCTGAGCTTTGCCGTCATTTCTACAATCAGGGATGGGTTTCCGGCACCGGCGGCAGCATCACCATTAAAGTACATGATGAATCCGTTCCTAAATCCGAACAACTTATCGTTATGTCTCCTTCTGGTGAGAAGAACCCGTTTACGATCTTACCCAACTTTTTAATTTTTGGGTTTTGTTTGAGTTTTTTGTTGATGGGTTTTTTTTGATAGGGGTG-CAAAAGGAAAGGATGGTGGATGAGGATATGTATATTATGTCATCAGATGGGTCTATTTTATCTGCACCGGTGGCTAAACCTACCCCTCATAAACCTCCTAAGTGTTCTGATTGTGCGCCTCTTTTTATGAAGGTATAGAGGTTTCTATAATATGATGAAACAATAGTTGTTGTAGTATTGTAAATTGAAGTTTTACCAATTTGAAAAGTTGTGGAACTAAGGCCTACTGGAAGTTGAATTGTTGTTTTTGGTTAAAATGCTGAAGCTAATTGAAGTTGGTGTTTATTCTCAGCTGTCTAAACTTCTTAGTTGCATAGAAAAAGATGTTATTTTTATCCGGCGGATAATTGTTTTGCAGTCATGTCTATTTTGAAATATCGAAAACAGGTACTACCTTCCAAGGTAGGGGTATGGTTGACTACTCTCTCCTGACCTCACTTGTGGGATTAGATTACACTGGGATGTTGTTGTTGTATTGTATTTGTTCTTTCTCAGTGTAATTGTTATGTTATCCGTAGTCCTTTCTTTGTTTTTGTCTAGCTCAACAAACTTAGCATATTTCATATCTCGCGGTATCATGTTATTATTTCTCTGCTGCCATCTTTTGAATTTGTTTTGTCTCTCTAAATAATCTAGTAACAGCCAGGATCCATGATTTTTTGTGTTGTAGACTGCAGTTACTGAGATATAGCATGACTTCTTTGGAATGGAGAGTGTGATCTCATATTAGTTGATCTATAAATAAATGATTCTCTTTTTCTTTTTGATTGACTATTCTACTCCGCTGATTGTAATTTTTTTCTTTTTTTTTCCTCAGGCATATCTGATGCGTAATGCTGGTGCTGTTATCCACAGTCATGGAATGGAATCCTGTCTTGTAACGATGCTCAATCCACTAGCAAAAGAATTTCGGGTAAACATGCTACAAATTTTTGTGAAGTTAGCTACATCTTGATGTGATTCCGATAACATGTTTTTGAGTCATCAAGAAAAAAGAGACTCGGTAATGCTGAGCTTCAAGCATTCAATTCAGTGCGTGTTATGCTGACTACTGATATTATGTCTTTTTATTTGAGAGTAAGAATTTTCTTTCAAATAGAGCAACTTTTGCTTTTCCATACGTTATAAGAAGTGTAATCCTTATGCATCTTCCCTTTGCCTGCATCTGTATAGGCGAGACTTTCTTTATAAATTTATTTATGTAGTTACTTCATGTAGCCGACACAACTAGTTTTGGAATTGAGGCATAAGTGATTGATCTCTTGATATCATTTGCATTTGAAACTTCCTTTTTACGAATGTATAGAGTTGCTATTGTCTCTATATCCTCCACCTAATTCCCCTAGCTCAATTGATAATATTTTAAAGATTTAATTCCGCATTGTAAATTACTGAAACCTATTGTTATTTTTCATCTTATTCACTATTCGTTGTTGCTTTGATTGACAGATCACTCATATGGAAATGATAAAAGGAATTCAAGGGCATGGTTACTATGATGAACTTGTGGTTCCTATCATAGAGAACACTGCATATGAGAGAGAACTCACAGAATCTCTTGCT</genome_strand>
        <mrna_strand>CTGGAAACGGAGCTCTGAAAATGGCGACTACCAGTCAAGCATATTTGGAAGGTGACAAGGTCAAAGAGACCAAGTCCTTAATCGCTGAGCTCTGCCGTCATTTCTACAATCAGGGATGGGTTTCCGGCACCGGCGGCAGCATCACCATTAAAGTACATGATGAATCCGTTCCTAAATCCCAACAACTTATCCTTATGTCTCCTTCTG......................................................................................GGGTGCCAAAAGGAAAGGATGGTGGACGAGGATATGTATATTATGGCATCAGATGGGTCTATTTTATCTGCGCCGGTGGCTAAACCTACCCCTCATAAACCTCCTAAGTGTTCTGATTGTGCTCCTCTTTTTATGAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATATCAGATGCCTAATGCTGGTGCAGTTATCCACAGTCATGGAATGGAATCCTGCCTTGTAACGATGCTCAATCCACTAGCAAAAGAATTTCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACTCATATGGAAATGATAAAAGGAATTCAAGGGCATGGTTACTATGACGAACTTGTGGTTCCTATCATAGAGAACACTGCATATGAGAGAGAACTCACAGAATCTCTTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E472517" ref_strand="+" ref_description="SGN-E472517 [cSTB-29-C15]">
      <seq>ctgaaaatggcgactaccagtcaagcatatttggaaggtgacaaggtcaaagagaccaagtccttaatcgctgagctctgccgtcatttctacaatcagggatgggtttccggcaccggcggaagcatcaccattaaagtacatgatgaatccgttcctaaatccgaacaacttatcgttatgtctccttctggggtgcaaaaggaaaggatggtggatgaggatatgtatattatggcatcagatgggtctattttatctgcgccggtggctaaacctacccctcataaacctcctaagtgttctgattgtgctcctctttttatgaaggcatatcagatgcgtaatgctggtgctgttatccacagtcatggaatggaatcctgccttgtaacgatgctcaatccactagcaaaagaatttcggatcactcatatggaaatgataaaaggaattcaagggcatggttactatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="69846" stop="67464"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69546" g_stop="69354" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="193" r_length="193" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69353" i_stop="69268" i_length="86">
            <donor d_prob="0.779" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69267" g_stop="69131" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="194" r_stop="330" r_length="137" r_score="0.978"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69130" i_stop="68446" i_length="685">
            <donor d_prob="0.958" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="68445" g_stop="68350" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="331" r_stop="426" r_length="96" r_score="0.979"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="68349" i_stop="67814" i_length="536">
            <donor d_prob="0.935" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67813" g_stop="67764" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="427" r_stop="476" r_length="50" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E472517" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>476</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E472517" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69546" e_stop="69354"/>
          <exon e_start="69267" e_stop="69131"/>
          <exon e_start="68445" e_stop="68350"/>
          <exon e_start="67813" e_stop="67764"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGAAAATGGCGACTACCAGTCAAGCATATTTGGAAGGTGACAAGGTCAAAGAGACCAAGTCCTTAATCGCTGAGCTTTGCCGTCATTTCTACAATCAGGGATGGGTTTCCGGCACCGGCGGCAGCATCACCATTAAAGTACATGATGAATCCGTTCCTAAATCCGAACAACTTATCGTTATGTCTCCTTCTGGTGAGAAGAACCCGTTTACGATCTTACCCAACTTTTTAATTTTTGGGTTTTGTTTGAGTTTTTTGTTGATGGGTTTTTTTTGATAGGGGTGCAAAAGGAAAGGATGGTGGATGAGGATATGTATATTATGTCATCAGATGGGTCTATTTTATCTGCACCGGTGGCTAAACCTACCCCTCATAAACCTCCTAAGTGTTCTGATTGTGCGCCTCTTTTTATGAAGGTATAGAGGTTTCTATAATATGATGAAACAATAGTTGTTGTAGTATTGTAAATTGAAGTTTTACCAATTTGAAAAGTTGTGGAACTAAGGCCTACTGGAAGTTGAATTGTTGTTTTTGGTTAAAATGCTGAAGCTAATTGAAGTTGGTGTTTATTCTCAGCTGTCTAAACTTCTTAGTTGCATAGAAAAAGATGTTATTTTTATCCGGCGGATAATTGTTTTGCAGTCATGTCTATTTTGAAATATCGAAAACAGGTACTACCTTCCAAGGTAGGGGTATGGTTGACTACTCTCTCCTGACCTCACTTGTGGGATTAGATTACACTGGGATGTTGTTGTTGTATTGTATTTGTTCTTTCTCAGTGTAATTGTTATGTTATCCGTAGTCCTTTCTTTGTTTTTGTCTAGCTCAACAAACTTAGCATATTTCATATCTCGCGGTATCATGTTATTATTTCTCTGCTGCCATCTTTTGAATTTGTTTTGTCTCTCTAAATAATCTAGTAACAGCCAGGATCCATGATTTTTTGTGTTGTAGACTGCAGTTACTGAGATATAGCATGACTTCTTTGGAATGGAGAGTGTGATCTCATATTAGTTGATCTATAAATAAATGATTCTCTTTTTCTTTTTGATTGACTATTCTACTCCGCTGATTGTAATTTTTTTCTTTTTTTTTCCTCAGGCATATCTGATGCGTAATGCTGGTGCTGTTATCCACAGTCATGGAATGGAATCCTGTCTTGTAACGATGCTCAATCCACTAGCAAAAGAATTTCGGGTAAACATGCTACAAATTTTTGTGAAGTTAGCTACATCTTGATGTGATTCCGATAACATGTTTTTGAGTCATCAAGAAAAAAGAGACTCGGTAATGCTGAGCTTCAAGCATTCAATTCAGTGCGTGTTATGCTGACTACTGATATTATGTCTTTTTATTTGAGAGTAAGAATTTTCTTTCAAATAGAGCAACTTTTGCTTTTCCATACGTTATAAGAAGTGTAATCCTTATGCATCTTCCCTTTGCCTGCATCTGTATAGGCGAGACTTTCTTTATAAATTTATTTATGTAGTTACTTCATGTAGCCGACACAACTAGTTTTGGAATTGAGGCATAAGTGATTGATCTCTTGATATCATTTGCATTTGAAACTTCCTTTTTACGAATGTATAGAGTTGCTATTGTCTCTATATCCTCCACCTAATTCCCCTAGCTCAATTGATAATATTTTAAAGATTTAATTCCGCATTGTAAATTACTGAAACCTATTGTTATTTTTCATCTTATTCACTATTCGTTGTTGCTTTGATTGACAGATCACTCATATGGAAATGATAAAAGGAATTCAAGGGCATGGTTACTATGA</genome_strand>
        <mrna_strand>CTGAAAATGGCGACTACCAGTCAAGCATATTTGGAAGGTGACAAGGTCAAAGAGACCAAGTCCTTAATCGCTGAGCTCTGCCGTCATTTCTACAATCAGGGATGGGTTTCCGGCACCGGCGGAAGCATCACCATTAAAGTACATGATGAATCCGTTCCTAAATCCGAACAACTTATCGTTATGTCTCCTTCTG......................................................................................GGGTGCAAAAGGAAAGGATGGTGGATGAGGATATGTATATTATGGCATCAGATGGGTCTATTTTATCTGCGCCGGTGGCTAAACCTACCCCTCATAAACCTCCTAAGTGTTCTGATTGTGCTCCTCTTTTTATGAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATATCAGATGCGTAATGCTGGTGCTGTTATCCACAGTCATGGAATGGAATCCTGCCTTGTAACGATGCTCAATCCACTAGCAAAAGAATTTCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACTCATATGGAAATGATAAAAGGAATTCAAGGGCATGGTTACTATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E457108" ref_strand="+" ref_description="SGN-E457108 [cPRO-1-O4]">
      <seq>gcaaacggtgctctgaaaatggcaactaccagtcaagcatatttggaaggtgagaaggtcaaagagaccaagtccttaatcgctgagctctgccgtcatttctacaatcagggatgggtttcccgcaccggcggaagcatcaccattaaagtacatgatgaatccgttcctaaatcccaacaacttatcgttatgtctccctctgggggtgcaaaagaaaagatggtggacgaggatatgtatattatggcatcagatggggctattttatctgcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="69858" stop="68898"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69558" g_stop="69354" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="205" r_length="205" r_score="0.961"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69353" i_stop="69268" i_length="86">
            <donor d_prob="0.779" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69267" g_stop="69197" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="276" r_length="71" r_score="0.887"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E457108" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>276</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E457108" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69558" e_stop="69354"/>
          <exon e_start="69267" e_stop="69197"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAACGGAGCTCTGAAAATGGCGACTACCAGTCAAGCATATTTGGAAGGTGACAAGGTCAAAGAGACCAAGTCCTTAATCGCTGAGCTTTGCCGTCATTTCTACAATCAGGGATGGGTTTCCGGCACCGGCGGCAGCATCACCATTAAAGTACATGATGAATCCGTTCCTAAATCCGAACAACTTATCGTTATGTCTCCTTCTGGTGAGAAGAACCCGTTTACGATCTTACCCAACTTTTTAATTTTTGGGTTTTGTTTGAGTTTTTTGTTGATGGGTTTTTTTTGATAG-GGGTGCAAAAGGAAAGGATGGTGGATGAGGATATGTATATTATGTCATCAGATGGGTCTATTTTATCTGCA</genome_strand>
        <mrna_strand>GCAAACGGTGCTCTGAAAATGGCAACTACCAGTCAAGCATATTTGGAAGGTGAGAAGGTCAAAGAGACCAAGTCCTTAATCGCTGAGCTCTGCCGTCATTTCTACAATCAGGGATGGGTTTCCCGCACCGGCGGAAGCATCACCATTAAAGTACATGATGAATCCGTTCCTAAATCCCAACAACTTATCGTTATGTCTCCCTCTG......................................................................................GGGGTGCAAAA-GAAAAGATGGTGGACGAGGATATGTATATTATGGCATCAGATGGGGCTATTTTATCTGCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E547751" ref_strand="+" ref_description="SGN-E547751 [TUS-71-M18](-)">
      <seq>aagatggccagtcgaccaatcttcgttttcatgctccttgccaccttggcattcgccatggtggcagagtcctcgttctcctcctcctcttccttcttcaacgaccctgtagtcaattcactcggccacagtactggtggtggccttgatgaattgatgactacaggtcgtatcggggacacattgtttgctgatgaagaaatgatgatgccgacagagtcggcccgtagggccctcaataatcgggaccacattagttacagggcgatgtcgaagaacgccatcccctgtgaccgacgtggcgcgtcctactaccagtgcacccgcatgcagaagattcggccttatagacgtggctgcagcaaaatcaccagatgccaacgtcgttaaaaatattacgttttattccgattgcgtggtacattatgaatgtaccatacaactacggaataaaaacgttttttgcgatcatcgcaaaaatataaaattaaactaattaatacttcggtaaacatttcatcttttaattgcgactatatatatacacactaatataaacatggaatggagataaaattgctaattaagaagctttttgtttgtccattccatataattattttaacttcatttcataatgtttacattgtgtacttttgtgccatcatttgaagatgattcattgatggtgaagactttgtaaattggtgaaataatatatttacagattctccgtaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="72335" stop="71001"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72035" g_stop="71306" g_length="730"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="734" r_length="734" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="737" polyA_stop="751"/>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E547751" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>730</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E547751" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72035" e_stop="71306"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGATGGCCAGTCGACCAATCTTCGTTTTCATGCTCCTTGCCACCTTGGCATTCGCCATGGTGGCAGAGTCTTCGTTCTCCTCCTCCTCTTCCTTCTTCAACGACCCTGTAGTCAATTCACTCGGCCACAATACTGGTGGTGGCCTTGATGAATGGATGACTACAGGTCGTATCGGGGACACATTGTTTGCTGATGAAGAAATGATGATGCCGACAGAGTCGGCCCGTAGGGCCCTCAATAATCAGGACCACATCAGTTACAGGGCGATGTCGAAGAACGCCATCCCCTGTGACCGACATGGCGCGTCTTACTACCAATGCACCCGCATGCAGAAGATTCGGCCTTATAGACGTGGCTGCAGCAAAATCACCAGATGCCAACGTCGTTAAAAATATTACGTTTTATTCCGATTACATGGTACATTATGAATGTACCATGCAACCACAGAATAAAAACATTTTTTGCGATCATCGCAAAAATATAAAATTAAACTAATTAATAC-TCGGTAAACATTTCATC---T--TTGCGACTATATATATACACACATTAATATAAACATGGATTGGAGATAAATTTGCTAATTAAGAAGCTTTTTGTTTGTCCATTCCATATAATTATTCTAACTTCATTTCATAATATTTACATTGTGTACTTTTGTGCCATCATTTGAAGATGATTCATTGATGGTGAAGACTTTGTAAATTGGTGAAATTATATATTTACAGATTCTCC</genome_strand>
        <mrna_strand>AAGATGGCCAGTCGACCAATCTTCGTTTTCATGCTCCTTGCCACCTTGGCATTCGCCATGGTGGCAGAGTCCTCGTTCTCCTCCTCCTCTTCCTTCTTCAACGACCCTGTAGTCAATTCACTCGGCCACAGTACTGGTGGTGGCCTTGATGAATTGATGACTACAGGTCGTATCGGGGACACATTGTTTGCTGATGAAGAAATGATGATGCCGACAGAGTCGGCCCGTAGGGCCCTCAATAATCGGGACCACATTAGTTACAGGGCGATGTCGAAGAACGCCATCCCCTGTGACCGACGTGGCGCGTCCTACTACCAGTGCACCCGCATGCAGAAGATTCGGCCTTATAGACGTGGCTGCAGCAAAATCACCAGATGCCAACGTCGTTAAAAATATTACGTTTTATTCCGATTGCGTGGTACATTATGAATGTACCATACAACTACGGAATAAAAACGTTTTTTGCGATCATCGCAAAAATATAAAATTAAACTAATTAATACTTCGGTAAACATTTCATCTTTTAATTGCGACTATATATATACACAC--TAATATAAACATGGAATGGAGATAAAATTGCTAATTAAGAAGCTTTTTGTTTGTCCATTCCATATAATTATTTTAACTTCATTTCATAATGTTTACATTGTGTACTTTTGTGCCATCATTTGAAGATGATTCATTGATGGTGAAGACTTTGTAAATTGGTGAAATAATATATTTACAGATTCTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E547752" ref_strand="+" ref_description="SGN-E547752 [TUS-71-M18]">
      <seq>tttcattctaaaggaagggcaaaaacaacaattaaaaatctcataaaaatatataattaaacaaacaaacaacaagagtcgcattacttacatcaatttgtcaagatggccagtcgaccaatcttcgttttcatgctccttgccaccttggcattcgccatggtggcagagtcctcgttctcctcctcctcttccttcttcaacgaccctgtagtcaattcactcggccacagtactggtggtggccttgatgaattgatgactacaggtcgtatcggggacacattgtttgctgatgaagaaatgatgatgccgacagagtcggcccgtagggccctcaataatcgggaccacattagttacagggcgatgtcgaagaacgccatcccctgtgaccgacgtggcgcgtcctactaccagtgcacccgcatgcagaagattcggccttatagacgtggctgcagcaaaatcaccagatgccaacgtcgttaaaaatattacgttttattccgattgcgtggtacattatgaatgtaccatacaactacggaataaaaacgttttttgcgatcatcgcaaaaatataaaattaaactaattaatacttcggtaaacatttcatcttttaattgcgactatatatatacacactaatataaacatggaatggagataaaattgctaattaagaagctttttgtttgtccattccatataattattttaacttcatttcataatgtttacattgtgtacttttgtgccatcatttgaagatgattcattgatgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="72437" stop="71051"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72137" g_stop="71351" g_length="787"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="791" r_length="791" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E547752" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>787</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E547752" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72137" e_stop="71351"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCATTCTAAAGGAAGGGCAAAAACAACAATAGAAAATCTCACAAAAATATAAAATTAAACAAACAAACAACAGAAGTCGCATTACTTTCATCAATTTGTCAAGATGGCCAGTCGACCAATCTTCGTTTTCATGCTCCTTGCCACCTTGGCATTCGCCATGGTGGCAGAGTCTTCGTTCTCCTCCTCCTCTTCCTTCTTCAACGACCCTGTAGTCAATTCACTCGGCCACAATACTGGTGGTGGCCTTGATGAATGGATGACTACAGGTCGTATCGGGGACACATTGTTTGCTGATGAAGAAATGATGATGCCGACAGAGTCGGCCCGTAGGGCCCTCAATAATCAGGACCACATCAGTTACAGGGCGATGTCGAAGAACGCCATCCCCTGTGACCGACATGGCGCGTCTTACTACCAATGCACCCGCATGCAGAAGATTCGGCCTTATAGACGTGGCTGCAGCAAAATCACCAGATGCCAACGTCGTTAAAAATATTACGTTTTATTCCGATTACATGGTACATTATGAATGTACCATGCAACCACAGAATAAAAACATTTTTTGCGATCATCGCAAAAATATAAAATTAAACTAATTAATAC-TCGGTAAACATTTCATC---T--TTGCGACTATATATATACACACATTAATATAAACATGGATTGGAGATAAATTTGCTAATTAAGAAGCTTTTTGTTTGTCCATTCCATATAATTATTCTAACTTCATTTCATAATATTTACATTGTGTACTTTTGTGCCATCATTTGAAGATGATTCATTGATGG</genome_strand>
        <mrna_strand>TTTCATTCTAAAGGAAGGGCAAAAACAACAATTAAAAATCTCATAAAAATATATAATTAAACAAACAAACAACAAGAGTCGCATTACTTACATCAATTTGTCAAGATGGCCAGTCGACCAATCTTCGTTTTCATGCTCCTTGCCACCTTGGCATTCGCCATGGTGGCAGAGTCCTCGTTCTCCTCCTCCTCTTCCTTCTTCAACGACCCTGTAGTCAATTCACTCGGCCACAGTACTGGTGGTGGCCTTGATGAATTGATGACTACAGGTCGTATCGGGGACACATTGTTTGCTGATGAAGAAATGATGATGCCGACAGAGTCGGCCCGTAGGGCCCTCAATAATCGGGACCACATTAGTTACAGGGCGATGTCGAAGAACGCCATCCCCTGTGACCGACGTGGCGCGTCCTACTACCAGTGCACCCGCATGCAGAAGATTCGGCCTTATAGACGTGGCTGCAGCAAAATCACCAGATGCCAACGTCGTTAAAAATATTACGTTTTATTCCGATTGCGTGGTACATTATGAATGTACCATACAACTACGGAATAAAAACGTTTTTTGCGATCATCGCAAAAATATAAAATTAAACTAATTAATACTTCGGTAAACATTTCATCTTTTAATTGCGACTATATATATACACAC--TAATATAAACATGGAATGGAGATAAAATTGCTAATTAAGAAGCTTTTTGTTTGTCCATTCCATATAATTATTTTAACTTCATTTCATAATGTTTACATTGTGTACTTTTGTGCCATCATTTGAAGATGATTCATTGATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E359551" ref_strand="+" ref_description="SGN-E359551 [cLPP-5-G11]">
      <seq>ttcactcggccacagtactggtggtggccttgatgaattgatgactacaggtcgtatcggggacacattgtttgctgatgaagaaatgatgatgccgacagagtcggcccgtagggccctcaataatcgggaccacattagttacagggcgatgtcgaagaacgccatcccctgtgaccgacgtggcgcgtcctactaccagtgcacccgcatgcagaagattcggccttatagacgtggctgcagcaaaatcaccagatgccaacgtcgttaaaaatattacgttttattccgattgcgtggtacattatgaatgtaccatacaactacggaataaaaacgttttttgcgatcatcgcaaaaatataaaattaaactaattaatacttcggtaaacatttcatcttttaattgcgactatatatatacacactaatataaacatggaatggagataaaattgctaattaagaaagcttttgtttgtccattccatataattattttaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="72219" stop="71114"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71919" g_stop="71414" g_length="506"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="510" r_length="510" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E359551" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>506</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E359551" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71919" e_stop="71414"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCACTCGGCCACAATACTGGTGGTGGCCTTGATGAATGGATGACTACAGGTCGTATCGGGGACACATTGTTTGCTGATGAAGAAATGATGATGCCGACAGAGTCGGCCCGTAGGGCCCTCAATAATCAGGACCACATCAGTTACAGGGCGATGTCGAAGAACGCCATCCCCTGTGACCGACATGGCGCGTCTTACTACCAATGCACCCGCATGCAGAAGATTCGGCCTTATAGACGTGGCTGCAGCAAAATCACCAGATGCCAACGTCGTTAAAAATATTACGTTTTATTCCGATTACATGGTACATTATGAATGTACCATGCAACCACAGAATAAAAACATTTTTTGCGATCATCGCAAAAATATAAAATTAAACTAATTAATAC-TCGGTAAACATTTCATC-TTT-GCGACTA-TATATATACACACATTAATATAAACATGGATTGGAGATAAATTTGCTAATTAAGAAGCTTTTTGTTTGTCCATTCCATATAATTATTCTAAC</genome_strand>
        <mrna_strand>TTCACTCGGCCACAGTACTGGTGGTGGCCTTGATGAATTGATGACTACAGGTCGTATCGGGGACACATTGTTTGCTGATGAAGAAATGATGATGCCGACAGAGTCGGCCCGTAGGGCCCTCAATAATCGGGACCACATTAGTTACAGGGCGATGTCGAAGAACGCCATCCCCTGTGACCGACGTGGCGCGTCCTACTACCAGTGCACCCGCATGCAGAAGATTCGGCCTTATAGACGTGGCTGCAGCAAAATCACCAGATGCCAACGTCGTTAAAAATATTACGTTTTATTCCGATTGCGTGGTACATTATGAATGTACCATACAACTACGGAATAAAAACGTTTTTTGCGATCATCGCAAAAATATAAAATTAAACTAATTAATACTTCGGTAAACATTTCATCTTTTAATTGCGACTATATATATACACACTAATATAAACATGGAATGGAGATAAAATTGCTAATTAAGAAAGCTTTTGTTTGTCCATTCCATATAATTATTTTAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E362654" ref_strand="+" ref_description="SGN-E362654 [cLPP-1-N4]">
      <seq>ttcattctaaaggaagggcaaaaacaacaattaaaaatctcataaaaatatataattaaacaaacaaacaacaagagtcgcattacttacatcaatttgtcaagatggccagtcgaccaatcttcgttttcatgctccttgccaccttggcattcgccatggtggcagagtcctcgttctcctcctcctcttccttcttcaacgaccctgtagtcaattcactcggccacagtactggtggtggccttgatgaattgatgactacaggtcgtatcggggacacattgtttgctgatgaagaaatgatgatgccgacagagtcggcccgtagggccctcaataatcgggaccacattagttacagggcgatgtcgaagaacgccatcccctgtgaccgacgtggcgcgtcctactaccagtgcacccgcatgcagaagattcggccttatagacgtggctgcagcaaaatcaccagatgccaacgtcgttaaaaatattacgttttattccgattgcgtggtacattatgaatgtaccatacaactacggaataaaaacgttttttgcgatcatcgcaaaaatataaaattaaactaattaatacttcggtaaacatttcatcttttaattgcgactatatatatacacactaatataaacatggaatgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="72436" stop="71171"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72136" g_stop="71471" g_length="666"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="670" r_length="670" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E362654" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>666</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E362654" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72136" e_stop="71471"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCATTCTAAAGGAAGGGCAAAAACAACAATAGAAAATCTCACAAAAATATAAAATTAAACAAACAAACAACAGAAGTCGCATTACTTTCATCAATTTGTCAAGATGGCCAGTCGACCAATCTTCGTTTTCATGCTCCTTGCCACCTTGGCATTCGCCATGGTGGCAGAGTCTTCGTTCTCCTCCTCCTCTTCCTTCTTCAACGACCCTGTAGTCAATTCACTCGGCCACAATACTGGTGGTGGCCTTGATGAATGGATGACTACAGGTCGTATCGGGGACACATTGTTTGCTGATGAAGAAATGATGATGCCGACAGAGTCGGCCCGTAGGGCCCTCAATAATCAGGACCACATCAGTTACAGGGCGATGTCGAAGAACGCCATCCCCTGTGACCGACATGGCGCGTCTTACTACCAATGCACCCGCATGCAGAAGATTCGGCCTTATAGACGTGGCTGCAGCAAAATCACCAGATGCCAACGTCGTTAAAAATATTACGTTTTATTCCGATTACATGGTACATTATGAATGTACCATGCAACCACAGAATAAAAACATTTTTTGCGATCATCGCAAAAATATAAAATTAAACTAATTAATAC-TCGGTAAACATTTCATC-TTT-GCGACTA-TATATATACACACATTAATATAAACATGGATTGGA</genome_strand>
        <mrna_strand>TTCATTCTAAAGGAAGGGCAAAAACAACAATTAAAAATCTCATAAAAATATATAATTAAACAAACAAACAACAAGAGTCGCATTACTTACATCAATTTGTCAAGATGGCCAGTCGACCAATCTTCGTTTTCATGCTCCTTGCCACCTTGGCATTCGCCATGGTGGCAGAGTCCTCGTTCTCCTCCTCCTCTTCCTTCTTCAACGACCCTGTAGTCAATTCACTCGGCCACAGTACTGGTGGTGGCCTTGATGAATTGATGACTACAGGTCGTATCGGGGACACATTGTTTGCTGATGAAGAAATGATGATGCCGACAGAGTCGGCCCGTAGGGCCCTCAATAATCGGGACCACATTAGTTACAGGGCGATGTCGAAGAACGCCATCCCCTGTGACCGACGTGGCGCGTCCTACTACCAGTGCACCCGCATGCAGAAGATTCGGCCTTATAGACGTGGCTGCAGCAAAATCACCAGATGCCAACGTCGTTAAAAATATTACGTTTTATTCCGATTGCGTGGTACATTATGAATGTACCATACAACTACGGAATAAAAACGTTTTTTGCGATCATCGCAAAAATATAAAATTAAACTAATTAATACTTCGGTAAACATTTCATCTTTTAATTGCGACTATATATATACACACTAATATAAACATGGAATGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E360078" ref_strand="+" ref_description="SGN-E360078 [cLPP-14-E19]">
      <seq>aaaaacaacaattaaaaatctcataaaaatatataattaaacaaacaaacagcgagagtcgcattacttacatcaatttgccaagatggccagtcgaccaatcttcgttttcatgctccttgccaccttggcattcgccatggtggcagagtcctcgttctcctcctcctcttccttcttcaacgaccctgtagtcaattcactcggccacagtactggtggtggccttgatgaatagatgactacaggtcgtatcggagacacattgtttgctgatgaagaaatgatgatgccgacagagtcggcccgtacggccctcaataatcgggaccacattatttacagggcgatgtcgaagaacgccatcccctgtgaccgacatggcgcgtcctactaccagtgcacccgcatgcagaagattcggccttatagacgtggctgcagcaaaatcaccagatgccaacgtcgctaaaaatattacggtttattccgattgcgtggtacattatgaatgtaccatacaactacggaataaaaacgttttttgcgatcatcgcaaaaatataaatataaactaattaatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="72417" stop="71232"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72117" g_stop="71532" g_length="586"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="586" r_length="586" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E360078" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>586</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E360078" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72117" e_stop="71532"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAACAACAATAGAAAATCTCACAAAAATATAAAATTAAACAAACAAACAACAGAAGTCGCATTACTTTCATCAATTTGTCAAGATGGCCAGTCGACCAATCTTCGTTTTCATGCTCCTTGCCACCTTGGCATTCGCCATGGTGGCAGAGTCTTCGTTCTCCTCCTCCTCTTCCTTCTTCAACGACCCTGTAGTCAATTCACTCGGCCACAATACTGGTGGTGGCCTTGATGAATGGATGACTACAGGTCGTATCGGGGACACATTGTTTGCTGATGAAGAAATGATGATGCCGACAGAGTCGGCCCGTAGGGCCCTCAATAATCAGGACCACATCAGTTACAGGGCGATGTCGAAGAACGCCATCCCCTGTGACCGACATGGCGCGTCTTACTACCAATGCACCCGCATGCAGAAGATTCGGCCTTATAGACGTGGCTGCAGCAAAATCACCAGATGCCAACGTCGTTAAAAATATTACGTTTTATTCCGATTACATGGTACATTATGAATGTACCATGCAACCACAGAATAAAAACATTTTTTGCGATCATCGCAAAAATATAAAATTAAACTAATTAATACT</genome_strand>
        <mrna_strand>AAAAACAACAATTAAAAATCTCATAAAAATATATAATTAAACAAACAAACAGCGAGAGTCGCATTACTTACATCAATTTGCCAAGATGGCCAGTCGACCAATCTTCGTTTTCATGCTCCTTGCCACCTTGGCATTCGCCATGGTGGCAGAGTCCTCGTTCTCCTCCTCCTCTTCCTTCTTCAACGACCCTGTAGTCAATTCACTCGGCCACAGTACTGGTGGTGGCCTTGATGAATAGATGACTACAGGTCGTATCGGAGACACATTGTTTGCTGATGAAGAAATGATGATGCCGACAGAGTCGGCCCGTACGGCCCTCAATAATCGGGACCACATTATTTACAGGGCGATGTCGAAGAACGCCATCCCCTGTGACCGACATGGCGCGTCCTACTACCAGTGCACCCGCATGCAGAAGATTCGGCCTTATAGACGTGGCTGCAGCAAAATCACCAGATGCCAACGTCGCTAAAAATATTACGGTTTATTCCGATTGCGTGGTACATTATGAATGTACCATACAACTACGGAATAAAAACGTTTTTTGCGATCATCGCAAAAATATAAATATAAACTAATTAATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E364641" ref_strand="+" ref_description="SGN-E364641 [cLPP-18-I16]">
      <seq>attctaaaggaagggcataaacaacaattaaaaatctcatggaaatatatggttgagcagacaaacaacaagagtcgcattacttacatcaatttgtcaagatggccagtcgaccaatcttcgttttcatgctccttgccaccttggcattcgccatggtggcagagtcctcgttctcctcctcctcttccttcttcaacgaccctgtaatcaattcactcggccacagtactggtggtggccttgatgaattgatgactacaggtcgtatctgggacacattgtttgctgatgaagaaatgatgatgccgacagagtctgtccgtacggccctcaataatcgggaccacattatttacagggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="72433" stop="71470"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72133" g_stop="71770" g_length="364"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="364" r_length="364" r_score="0.929"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E364641" ref_strand="+">
        <total_alignment_score>0.929</total_alignment_score>
        <cumulative_length_of_scored_exons>364</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E364641" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72133" e_stop="71770"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCTAAAGGAAGGGCAAAAACAACAATAGAAAATCTCACAAAAATATAAAATTAAACAAACAAACAACAGAAGTCGCATTACTTTCATCAATTTGTCAAGATGGCCAGTCGACCAATCTTCGTTTTCATGCTCCTTGCCACCTTGGCATTCGCCATGGTGGCAGAGTCTTCGTTCTCCTCCTCCTCTTCCTTCTTCAACGACCCTGTAGTCAATTCACTCGGCCACAATACTGGTGGTGGCCTTGATGAATGGATGACTACAGGTCGTATCGGGGACACATTGTTTGCTGATGAAGAAATGATGATGCCGACAGAGTCGGCCCGTAGGGCCCTCAATAATCAGGACCACATCAGTTACAGGGC</genome_strand>
        <mrna_strand>ATTCTAAAGGAAGGGCATAAACAACAATTAAAAATCTCATGGAAATATATGGTTGAGCAGACAAACAACAAGAGTCGCATTACTTACATCAATTTGTCAAGATGGCCAGTCGACCAATCTTCGTTTTCATGCTCCTTGCCACCTTGGCATTCGCCATGGTGGCAGAGTCCTCGTTCTCCTCCTCCTCTTCCTTCTTCAACGACCCTGTAATCAATTCACTCGGCCACAGTACTGGTGGTGGCCTTGATGAATTGATGACTACAGGTCGTATCTGGGACACATTGTTTGCTGATGAAGAAATGATGATGCCGACAGAGTCTGTCCGTACGGCCCTCAATAATCGGGACCACATTATTTACAGGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E375432" ref_strand="+" ref_description="SGN-E375432 [TUS-34-B12](-)">
      <seq>tagcatttgcaacgagccgaccctctcaggtgatcggcatgcactttatgaatcctccgccgattatgaagctggttgaaattattcggggtgcagatacatcagaagacacatattgtgccactaaatgcctggcagaaaggtttggtaagacagttatttgctttcaggattactttggtttcatagtaaaccgaattttgatgccaatgataaacgaagcctttcataccctgtacaccggagttgcaacaaaaaaagatatcgatacaggaatgaaactaggaaccaaccatcctatgggtccttttgaacttgcagattttatcggactggatgtttgtttgtcaatcatgaaagtttttcaagccggtttaggggacgataaatatgccccatgccctttccttgtgcagtatgttgatgctggtagacttggtaaaaaacgaggggttggggtatatgattaccgtaatgctggtaaaaaaacaggaggatcgcctcgactttgaactccttgcccttggatttgatgaaacaaattacaacttgttgaaatactttccttgtacaattcaataaaaaaaaaaaaaattcccggggtaattgttttcattttattgcatagcttttgttgtgtccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="81375" stop="18127"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81075" g_stop="81047" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="29" r_length="29" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81046" i_stop="80036" i_length="1011">
            <donor d_prob="0.993" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80035" g_stop="79923" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="30" r_stop="142" r_length="113" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79922" i_stop="79453" i_length="470">
            <donor d_prob="0.857" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="79452" g_stop="78952" g_length="501"/>
          <reference_exon_boundary r_type="cDNA" r_start="143" r_stop="643" r_length="501" r_score="0.952"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78951" i_stop="78755" i_length="197">
            <donor d_prob="0.000" d_score="0.90"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78754" g_stop="78738" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="644" r_stop="660" r_length="17" r_score="0.647"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="78737" i_stop="78484" i_length="254">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.920" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="78483" g_stop="78470" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="661" r_stop="674" r_length="14" r_score="0.643"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E375432" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>674</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E375432" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81075" e_stop="81047"/>
          <exon e_start="80035" e_stop="79923"/>
          <exon e_start="79452" e_stop="78952"/>
          <exon e_start="78754" e_stop="78738"/>
          <exon e_start="78483" e_stop="78470"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCATCTGCAACGAGCCGACCCTCTCAGGTTTGCTTTTCTTGGCTGTTGATTGATTGTAGACTGAAAGATGTTATATGGAACTTATTGAAAACAGAATAACTTTGTTCGTATGCAAATATGTGTGTTGAAGTTCAGGAAAATGCCAACATTCAAACAATTGCATAACTTTCTTGCTCACTTCCTTTTTTGAATCATTCAGAAGGAAGATGTGTGAAATTCATCTATATCATGTTGTCTGTCCTTTCAGACTTGTGGAATCTCAATGCCTAGGCACTCTTGCCCGAGCTGGTAGAATTTCTTGTGGTTGTATTATGGTTGCACTAGTGTGTATGTCCCATCTTTAGTAGTCATCATCACCTGTAAAAACACACATTGATTAACTTTATGATGAGATTGTCTGTATTTCTCAGGAACAACATATAGAATATTATAGTATTGGTAAGGTGAGGGAATTATCTTTCGTCGGGTCAATGAAGTGGTTGGTAAGATTGAAGGTGTAAGGCATCTCACTGCTAATCAGAAGACAAGGGACTAAAAGAACTTCTAAATGGCTGCTAAAAAGCAATACTGGAATGTCGTTGTTATGAATAACTGATAGGGAACCCCATATCTCAAAGTGATGATTTGAAGGAGGATTGATTTGCTCATAAAGAAGTTACGAGTTTAAGTCAGAGATAGAACAGACTTATGCTTGCTGCTTTTTCTTGTATATTATGTAGAATGCACTGTTCAATTCATTTTGATAGTCTTTTGGTTCCTGAAAAAACACCGGTAATGGAGTATTGTGCTCATTTCAGGCCAAAAAAGTCTTTTCTTCTTTCTTTGTGTGTGTATATGAAGTGTCTTGTATATGTTTATTTTGTTTTCTTGAAGTTATACTCATTTATTATATTTTTGGTACTTATTAAGGAACAGCAAATGATCAGCGCAAGCTGACAATGAATCAGGCACTTGTAGTCATTTCCCTCCCCAGAGTCTCCATTCATTGCTCATATATCTTCTCTTCCTTTTTTGTGTATGTTATGTCTTCATGGGCAGGTGATCGGCATGCACTTTATGAATCCTCCGCCGATTATGAAGCTGGTTGAAATTATTCGGGGTGCAGATACATCAGAAGACACATATTGTGCCACTAAATGCCTGGCAGAGAGGTGACTGATAAGAAAACCCTGCAACTAGTATTTACCTTTATATGCACGTCTCGTCAACACTTCCTTTTTTAAAAAAAATTCTGCCTTGAATATTTACGCTTTCAGATACGACAGTCATTTATAATCTACATGTCTTATGGATATAACATTTCCCAAAGCTTCACCAACCCCAAACACAATCTCTCATCCTAGCTGCAAAGGCTCATTATGTATCCCTGTTTAATGTTTGTTAATAGATGCAACCGAACAATGAGAAAGTGGTCTTCATTATGTCCCTGTCTCAAGATGTGAGATTGTTTGTTATCTATAATATGTCTACATAAACGTTTTTTCTTTTAAGCTTCATAAGCAACATGGACAAAGCTTATACAGTATCTCTTATTTCCGATATATGAAATGAATTAAAATACAGGTAAAAGAATAGTTTCTTACCCTCTGTAACTAATTTCTGATTTATCTATTATTTGCAGGTTTGGTAAGACAGTTATCTGCTCTCAGGATTACTCTGGTTTCATAGTAAACCGAATTTTGATGCCAATGATAAACGAAGCCTTTCATACACTGTACACCGGAGTTGCAACAAAAGAAGATATCGATACAGGAATGAAACTAGGAACCAACCATCCTATGGGTCCTCTTGAACTTGCAGATTTTATCGGACTGGATGTTTGTTTGTCAATCATGAAAGTTCTTCAAGCCGGTCTAGGGGACGATAAATATGCCCCATGCCCTCTCCTTGTGCAGTATGTTGATGCTGGTAGACTTGGTAAAAAGCGAGGCGTTGGTGTATATGATTACCGTAATGCTGCTAAGAAAACAGGAGGATCGCCTCGACTCTGAACTCCTTGCCCTTGGATTTGATGAAACAAATTACAACTTGTTGAAATACTCTCCTTGTACAATTCAATAAAAGAGAGAAAAATTCACGGTGTAATTGTTCTCATCTTATTGCATAGCTTTTGTTGTGTCAAGTCCAGGCTTTTTGCCAAATTCCTCCCTCATTTTTGTATTACATCCTGCAGCTTATAATGATCCAAGTTTGGCCAACGACAACAAACCCGATGTAATCCCACAAGCTGGATCTGGAGAGGGTGGTGTGTACATGAAACTGTTCCCCAAGTTGTGGCCATTGTAATATTTAAGTAAAAGCTAAAAATCAACCTTAATTAAATTAAATTAAATTAAATTTCCTTATACCATTAGTACGTTACCTTTATCCATGTGCTTGATATCAAACACATACAGTCAATTTCATATAAACTATATATAACAACATATTTACCCTGAAACCTCCATTTCAGTTTCATTTTCCTCTCACTTCACTAATTTCAGTTTCTTGTCCATTTTATTTATCCCCCTTGTGATTTTGTGACATTTTATGTATCTTTACAGTTATTAAACTATCATAGTAAGAAAATCTCTTGCATATTTTGAAACAGAAGAAAATTTCAAA</genome_strand>
        <mrna_strand>TAGCATTTGCAACGAGCCGACCCTCTCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATCGGCATGCACTTTATGAATCCTCCGCCGATTATGAAGCTGGTTGAAATTATTCGGGGTGCAGATACATCAGAAGACACATATTGTGCCACTAAATGCCTGGCAGAAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGTAAGACAGTTATTTGCTTTCAGGATTACTTTGGTTTCATAGTAAACCGAATTTTGATGCCAATGATAAACGAAGCCTTTCATACCCTGTACACCGGAGTTGCAACAAAAAAAGATATCGATACAGGAATGAAACTAGGAACCAACCATCCTATGGGTCCTTTTGAACTTGCAGATTTTATCGGACTGGATGTTTGTTTGTCAATCATGAAAGTTTTTCAAGCCGGTTTAGGGGACGATAAATATGCCCCATGCCCTTTCCTTGTGCAGTATGTTGATGCTGGTAGACTTGGTAAAAAACGAGGGGTTGGGGTATATGATTACCGTAATGCTGGTAAAAAAACAGGAGGATCGCCTCGACTTTGAACTCCTTGCCCTTGGATTTGATGAAACAAATTACAACTTGTTGAAATACTTTCCTTGTACAATTCAATAAAAAAAAAAAAAATTCCCGGGGTAATTGTTTTCATTTTATTGCATAGCTTTTGTTGTGTCCA.....................................................................................................................................................................................................AAAAAAAAAAAAAAAAA..............................................................................................................................................................................................................................................................AAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E375214" ref_strand="+" ref_description="SGN-E375214 [TUS-34-B11](-)">
      <seq>aagttcttcaagccggtttaggggacgataaatatgccccatgccctctccttgtgcagtatgttgatgctggtagacttggtaaaaagcgaggcgttggtgtatatgattaccgtaatgctgctaaaaaaacaggaggatcgcctcgactttgaactccttgcccttggatttgatgaaacaaattacaacttgttgaaatactctccttgtacaattcaataaaaaaaagaaaaattcccggggtaattgttttcattttattgcatagcttttgttgtgtccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="79537" stop="18127"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79237" g_stop="78952" g_length="286"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="286" r_length="286" r_score="0.965"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="78951" i_stop="78755" i_length="197">
            <donor d_prob="0.000" d_score="0.90"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="78754" g_stop="78738" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="303" r_length="17" r_score="0.647"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="78737" i_stop="78484" i_length="254">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.920" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78483" g_stop="78470" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="317" r_length="14" r_score="0.643"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E375214" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>317</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E375214" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79237" e_stop="78952"/>
          <exon e_start="78754" e_stop="78738"/>
          <exon e_start="78483" e_stop="78470"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTTCTTCAAGCCGGTCTAGGGGACGATAAATATGCCCCATGCCCTCTCCTTGTGCAGTATGTTGATGCTGGTAGACTTGGTAAAAAGCGAGGCGTTGGTGTATATGATTACCGTAATGCTGCTAAGAAAACAGGAGGATCGCCTCGACTCTGAACTCCTTGCCCTTGGATTTGATGAAACAAATTACAACTTGTTGAAATACTCTCCTTGTACAATTCAATAAAAGAGAGAAAAATTCACGGTGTAATTGTTCTCATCTTATTGCATAGCTTTTGTTGTGTCAAGTCCAGGCTTTTTGCCAAATTCCTCCCTCATTTTTGTATTACATCCTGCAGCTTATAATGATCCAAGTTTGGCCAACGACAACAAACCCGATGTAATCCCACAAGCTGGATCTGGAGAGGGTGGTGTGTACATGAAACTGTTCCCCAAGTTGTGGCCATTGTAATATTTAAGTAAAAGCTAAAAATCAACCTTAATTAAATTAAATTAAATTAAATTTCCTTATACCATTAGTACGTTACCTTTATCCATGTGCTTGATATCAAACACATACAGTCAATTTCATATAAACTATATATAACAACATATTTACCCTGAAACCTCCATTTCAGTTTCATTTTCCTCTCACTTCACTAATTTCAGTTTCTTGTCCATTTTATTTATCCCCCTTGTGATTTTGTGACATTTTATGTATCTTTACAGTTATTAAACTATCATAGTAAGAAAATCTCTTGCATATTTTGAAACAGAAGAAAATTTCAAA</genome_strand>
        <mrna_strand>AAGTTCTTCAAGCCGGTTTAGGGGACGATAAATATGCCCCATGCCCTCTCCTTGTGCAGTATGTTGATGCTGGTAGACTTGGTAAAAAGCGAGGCGTTGGTGTATATGATTACCGTAATGCTGCTAAAAAAACAGGAGGATCGCCTCGACTTTGAACTCCTTGCCCTTGGATTTGATGAAACAAATTACAACTTGTTGAAATACTCTCCTTGTACAATTCAATAAAAAAAAGAAAAATTCCCGGGGTAATTGTTTTCATTTTATTGCATAGCTTTTGTTGTGTCCA.....................................................................................................................................................................................................AAAAAAAAAAAAAAAAA..............................................................................................................................................................................................................................................................AAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E597196" ref_strand="+" ref_description="SGN-E597196 [40695]">
      <seq>ggaacttgcagattttatcggactggatgtttgtttgtcaatcatgaaagttcttcaagccggtctaggggacgataaatatgccccatgccctctccttgtgcagtatgttgatgctggtaagcttggtaaaaagcgaggcgttggagtatatgactaccgtgatggtgctgcgaaaataggaggatcgcctcgactctgaactccttgcccttggaatttatgaaacaaattacaaattgttgaaacactccttacaattcaataaaagagaaaaaaaaaatgacagtgtaattgttctcatcttattgcatagcttctgttgtggcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="79583" stop="78652"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79284" g_stop="78952" g_length="333"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="331" r_length="331" r_score="0.916"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="332" polyA_stop="359"/>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E597196" ref_strand="+">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>333</cumulative_length_of_scored_exons>
        <coverage percentage="0.928" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E597196" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79284" e_stop="78952"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAACTTGCAGATTTTATCGGACTGGATGTTTGTTTGTCAATCATGAAAGTTCTTCAAGCCGGTCTAGGGGACGATAAATATGCCCCATGCCCTCTCCTTGTGCAGTATGTTGATGCTGGTAGACTTGGTAAAAAGCGAGGCGTTGGTGTATATGATTACCGTAATGCTGCTAAGAAAACAGGAGGATCGCCTCGACTCTGAACTCCTTGCCCTTGGATTTGATGAAACAAATTACAACTTGTTGAAATACTCTCCTTGTACAATTCAATAAAAGAGAGAAAA--ATTCACGGTGTAATTGTTCTCATCTTATTGCATAGCTTTTGTTGTGTCAA</genome_strand>
        <mrna_strand>GGAACTTGCAGATTTTATCGGACTGGATGTTTGTTTGTCAATCATGAAAGTTCTTCAAGCCGGTCTAGGGGACGATAAATATGCCCCATGCCCTCTCCTTGTGCAGTATGTTGATGCTGGTAAGCTTGGTAAAAAGCGAGGCGTTGGAGTATATGACTACCGTGATGGTGCTGCGAAAATAGGAGGATCGCCTCGACTCTGAACTCCTTGCCCTTGGAATTTATGAAACAAATTACAAATTGTTG-AA-ACACTCC-T-TACAATTCAATAAAAGAGAAAAAAAAAATGACAGTGTAATTGTTCTCATCTTATTGCATAGCTTCTGTTGTGGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E586795" ref_strand="+" ref_description="SGN-E586795 [75630]">
      <seq>tctccttgtgcagtatgttgatgctggtaggcttggtaaaaagcaaggcgttggagtatatgactaccgtgatgctgctgcgaaaacaggaggatcgcctcgactctgaactccttgcccttggaatttatgaaacaaattacaacttgttgaaacactctccttcttacaattcaataaaagagaaaaaaaatgactctgtaattgttctcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="79491" stop="78680"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79191" g_stop="78981" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="212" r_length="212" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="213" polyA_stop="222"/>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E586795" ref_strand="+">
        <total_alignment_score>0.915</total_alignment_score>
        <cumulative_length_of_scored_exons>211</cumulative_length_of_scored_exons>
        <coverage percentage="0.950" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E586795" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79191" e_stop="78981"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCCTTGTGCAGTATGTTGATGCTGGTAGACTTGGTAAAAAGCGAGGCGTTGGTGTATATGATTACCGTAATGCTGCTAAGAAAACAGGAGGATCGCCTCGACTCTGAACTCCTTGCCCTTGGATTTGATGAAACAAATTACAACTTGTTGAAATACTCTCCTT-GTACAATTCAATAAAAGAGAGAAAAATTCACGGTGTAATTGTTCTC</genome_strand>
        <mrna_strand>TCTCCTTGTGCAGTATGTTGATGCTGGTAGGCTTGGTAAAAAGCAAGGCGTTGGAGTATATGACTACCGTGATGCTGCTGCGAAAACAGGAGGATCGCCTCGACTCTGAACTCCTTGCCCTTGGAATTTATGAAACAAATTACAACTTGTTGAAACACTCTCCTTCTTACAATTCAATAAAAGAGAAAAAAAATGACTCTGTAATTGTTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E705194" ref_strand="+" ref_description="SGN-E705194 [FA26BG05]">
      <seq>cttttttagtgataatctgaataaattttttaggcatggccgatataacaaggatcggagttgttggcgccggccaaatgggtgccggaatcgcccaactcgccgccgtcaatggcgtcgacgtttggctttacgatttggattctgaagctcttactaaagctcaaaaatctatttccaataatattcaacgcctcctcaccaaaggacaaatctctcaggcaacgagtgttgatgctgtgaagcgtcttcgttgttcttcgcgcttggatgatttacagtcagttgatattgttgttgaggctattgtggagtctgaacaagtgaagaaatctttatttgctaacttggataagattgtaaagagttctgctattttggcttctaatacaagctctatttccattactcgtctagcatctgcaacgagccgaccctctcaggtgatcggcatgcactttatgaatcctccgccgattatgaagctggttgaaattattcggggtgcagatacatcagaagacacatattgtgccactaaatgcctggcagagaggtttggtaagacagttatctgctctcaggattactctggtttcatagtaaaccgaattttgatgccaatgataaacgaagcctttcatacactgtacaccggagttgcaacaaaagaagatatcgatacaggaatgaaactaggaaccaaccatcctatgggtcctcttgaacttgcagattttatcggactggatgtttgtttgtcaatcatgaaagttctttcagccggtctaggggacgataaatatgccccatgccctctccttgtgcagtatgttgatgctggtagacttggaaaaagcgaagcgttggtgtatatgattaccgtaatgctgctaagaaacagggagatcgcctcgactctgaactccttgccctttggattgatgaaacaaataacancttgntgaaatactcttcttnacaatttccataagagagaaaaatcacggtgtaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="82085" stop="78727"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81785" g_stop="81565" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="221" r_length="221" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81564" i_stop="81269" i_length="296">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81268" g_stop="81047" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="443" r_length="222" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81046" i_stop="80036" i_length="1011">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80035" g_stop="79923" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="556" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="79922" i_stop="79453" i_length="470">
            <donor d_prob="0.857" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="79452" g_stop="78990" g_length="463"/>
          <reference_exon_boundary r_type="cDNA" r_start="557" r_stop="1014" r_length="458" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1015" polyA_stop="1038"/>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E705194" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>1019</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E705194" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81785" e_stop="81565"/>
          <exon e_start="81268" e_stop="81047"/>
          <exon e_start="80035" e_stop="79923"/>
          <exon e_start="79452" e_stop="78990"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTTTAGTGATAATCTGAATAAATTTTTTAGGCATGGCCGATATAACAAGGATCGGAGTTGTTGGCGCCGGCCAAATGGGTGCCGGAATCGCCCAACTCGCCGCCGTCAACGGCGTCGACGTTTGGCTTTACGATTTGGATTCTGAAGCTCTTACTAAAGCTCAAAAATCTATTTCCAATAATATTCAACGCCTCCTCACCAAAGGACAAATCTCTCAGGTATTATTACTCCTTTCGTTTGAGCTGAAAGCTTTTGTAAATTGCTTGCTTTGAATTTTACGTTTTTTAATAAGATTTTGCTTGCTTTGAATTTTACGTTTTGGAGTTCTGGAATATAAAGTCAGAATTGATTCATCACAAATGTTTGAAAAATTCTTGTGAAAAAAGCTGGTTTGATTCTCAAAGTTGTACTACTTACTCTATGAAGGTGTTGTTTAGGGTTAATTTGGGAGTTATTTATAAGAAATGTGAACTGTGTTGAGTTCATGTGTTTGATGATCTCATTGATGAAACAGGCAACGAGTGTTGATGCTGTGAAGCGTCTTCGTTGTTCTTCGCGCTTGGATGATTTACAGTCAGTTGATATTGTTGTTGAGGCTATTGTGGAGTCTGAACAAGTGAAGAAATCTTTATTTGCTAACTTGGATAAGATTGTAAAGAGTTCTGCTATTTTGGCTTCTAATACAAGCTCTATTTCCATTACTCGTCTAGCATCTGCAACGAGCCGACCCTCTCAGGTTTGCTTTTCTTGGCTGTTGATTGATTGTAGACTGAAAGATGTTATATGGAACTTATTGAAAACAGAATAACTTTGTTCGTATGCAAATATGTGTGTTGAAGTTCAGGAAAATGCCAACATTCAAACAATTGCATAACTTTCTTGCTCACTTCCTTTTTTGAATCATTCAGAAGGAAGATGTGTGAAATTCATCTATATCATGTTGTCTGTCCTTTCAGACTTGTGGAATCTCAATGCCTAGGCACTCTTGCCCGAGCTGGTAGAATTTCTTGTGGTTGTATTATGGTTGCACTAGTGTGTATGTCCCATCTTTAGTAGTCATCATCACCTGTAAAAACACACATTGATTAACTTTATGATGAGATTGTCTGTATTTCTCAGGAACAACATATAGAATATTATAGTATTGGTAAGGTGAGGGAATTATCTTTCGTCGGGTCAATGAAGTGGTTGGTAAGATTGAAGGTGTAAGGCATCTCACTGCTAATCAGAAGACAAGGGACTAAAAGAACTTCTAAATGGCTGCTAAAAAGCAATACTGGAATGTCGTTGTTATGAATAACTGATAGGGAACCCCATATCTCAAAGTGATGATTTGAAGGAGGATTGATTTGCTCATAAAGAAGTTACGAGTTTAAGTCAGAGATAGAACAGACTTATGCTTGCTGCTTTTTCTTGTATATTATGTAGAATGCACTGTTCAATTCATTTTGATAGTCTTTTGGTTCCTGAAAAAACACCGGTAATGGAGTATTGTGCTCATTTCAGGCCAAAAAAGTCTTTTCTTCTTTCTTTGTGTGTGTATATGAAGTGTCTTGTATATGTTTATTTTGTTTTCTTGAAGTTATACTCATTTATTATATTTTTGGTACTTATTAAGGAACAGCAAATGATCAGCGCAAGCTGACAATGAATCAGGCACTTGTAGTCATTTCCCTCCCCAGAGTCTCCATTCATTGCTCATATATCTTCTCTTCCTTTTTTGTGTATGTTATGTCTTCATGGGCAGGTGATCGGCATGCACTTTATGAATCCTCCGCCGATTATGAAGCTGGTTGAAATTATTCGGGGTGCAGATACATCAGAAGACACATATTGTGCCACTAAATGCCTGGCAGAGAGGTGACTGATAAGAAAACCCTGCAACTAGTATTTACCTTTATATGCACGTCTCGTCAACACTTCCTTTTTTAAAAAAAATTCTGCCTTGAATATTTACGCTTTCAGATACGACAGTCATTTATAATCTACATGTCTTATGGATATAACATTTCCCAAAGCTTCACCAACCCCAAACACAATCTCTCATCCTAGCTGCAAAGGCTCATTATGTATCCCTGTTTAATGTTTGTTAATAGATGCAACCGAACAATGAGAAAGTGGTCTTCATTATGTCCCTGTCTCAAGATGTGAGATTGTTTGTTATCTATAATATGTCTACATAAACGTTTTTTCTTTTAAGCTTCATAAGCAACATGGACAAAGCTTATACAGTATCTCTTATTTCCGATATATGAAATGAATTAAAATACAGGTAAAAGAATAGTTTCTTACCCTCTGTAACTAATTTCTGATTTATCTATTATTTGCAGGTTTGGTAAGACAGTTATCTGCTCTCAGGATTACTCTGGTTTCATAGTAAACCGAATTTTGATGCCAATGATAAACGAAGCCTTTCATACACTGTACACCGGAGTTGCAACAAAAGAAGATATCGATACAGGAATGAAACTAGGAACCAACCATCCTATGGGTCCTCTTGAACTTGCAGATTTTATCGGACTGGATGTTTGTTTGTCAATCATGAAAGTTCTTCAAGCCGGTCTAGGGGACGATAAATATGCCCCATGCCCTCTCCTTGTGCAGTATGTTGATGCTGGTAGACTTGGTAAAAAGCGAGGCGTTGGTGTATATGATTACCGTAATGCTGCTAAGAAAACAGGAGGATCGCCTCGACTCTGAACTCCTTGCCCTTGGATTTGATGAAACAAATTACAACTTGTTGAAATACTCTCCTTGTACAATTCAATAAAAGAGAGAAAAATTCACGGTGTA</genome_strand>
        <mrna_strand>CTTTTTTAGTGATAATCTGAATAAATTTTTTAGGCATGGCCGATATAACAAGGATCGGAGTTGTTGGCGCCGGCCAAATGGGTGCCGGAATCGCCCAACTCGCCGCCGTCAATGGCGTCGACGTTTGGCTTTACGATTTGGATTCTGAAGCTCTTACTAAAGCTCAAAAATCTATTTCCAATAATATTCAACGCCTCCTCACCAAAGGACAAATCTCTCAG........................................................................................................................................................................................................................................................................................................GCAACGAGTGTTGATGCTGTGAAGCGTCTTCGTTGTTCTTCGCGCTTGGATGATTTACAGTCAGTTGATATTGTTGTTGAGGCTATTGTGGAGTCTGAACAAGTGAAGAAATCTTTATTTGCTAACTTGGATAAGATTGTAAAGAGTTCTGCTATTTTGGCTTCTAATACAAGCTCTATTTCCATTACTCGTCTAGCATCTGCAACGAGCCGACCCTCTCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATCGGCATGCACTTTATGAATCCTCCGCCGATTATGAAGCTGGTTGAAATTATTCGGGGTGCAGATACATCAGAAGACACATATTGTGCCACTAAATGCCTGGCAGAGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGTAAGACAGTTATCTGCTCTCAGGATTACTCTGGTTTCATAGTAAACCGAATTTTGATGCCAATGATAAACGAAGCCTTTCATACACTGTACACCGGAGTTGCAACAAAAGAAGATATCGATACAGGAATGAAACTAGGAACCAACCATCCTATGGGTCCTCTTGAACTTGCAGATTTTATCGGACTGGATGTTTGTTTGTCAATCATGAAAGTTCTTTCAGCCGGTCTAGGGGACGATAAATATGCCCCATGCCCTCTCCTTGTGCAGTATGTTGATGCTGGTAGACTTGG-AAAAAGCGAAGCGTTGGTGTATATGATTACCGTAATGCTGCTAAG-AAACAGGGAGATCGCCTCGACTCTGAACTCCTTGCCCTTTGGATTGATGAAACAAATAACANCTTGNTGAAATACTCTTCTT-NACAATT-TCCATAAGAGAGAAAAA-TCACGGTGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E597289" ref_strand="+" ref_description="SGN-E597289 [40790]">
      <seq>ggaacttgcagattttatcggactggatgtttgtttgtcaatcatgaaagttcttcaagccggtctaggggacgataaatatgccccatgccctctccttgtgcagtatgttgatgctggtaagcttggtaaaaagcgaggcgttggagtatatgactaccgtgatggtgctgcgaaaataggaggatcgcctcgactctgaactccttgcccttggaatttatgaaacaaattacaaattgttgaaacactccttacaattcaataaaagagaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="79583" stop="78702"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79284" g_stop="79003" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="278" r_length="278" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E597289" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>282</cumulative_length_of_scored_exons>
        <coverage percentage="1.014" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E597289" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79284" e_stop="79003"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAACTTGCAGATTTTATCGGACTGGATGTTTGTTTGTCAATCATGAAAGTTCTTCAAGCCGGTCTAGGGGACGATAAATATGCCCCATGCCCTCTCCTTGTGCAGTATGTTGATGCTGGTAGACTTGGTAAAAAGCGAGGCGTTGGTGTATATGATTACCGTAATGCTGCTAAGAAAACAGGAGGATCGCCTCGACTCTGAACTCCTTGCCCTTGGATTTGATGAAACAAATTACAACTTGTTGAAATACTCTCCTTGTACAATTCAATAAAAGAGAGAAA</genome_strand>
        <mrna_strand>GGAACTTGCAGATTTTATCGGACTGGATGTTTGTTTGTCAATCATGAAAGTTCTTCAAGCCGGTCTAGGGGACGATAAATATGCCCCATGCCCTCTCCTTGTGCAGTATGTTGATGCTGGTAAGCTTGGTAAAAAGCGAGGCGTTGGAGTATATGACTACCGTGATGGTGCTGCGAAAATAGGAGGATCGCCTCGACTCTGAACTCCTTGCCCTTGGAATTTATGAAACAAATTACAAATTGTTG-AA-ACACTCC-T-TACAATTCAATAAAAGAGAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E700551" ref_strand="+" ref_description="SGN-E700551 [FA13BG09]">
      <seq>gttgttggcgccggccaaatgggtgccggaatcgcccaactcgccgccgtcaacggcgtcgacgtttggctttacgatttggattctgaagctcttactaaagctcaaaaatctatttccaataatattcaacgcctcctcaccaaaggacaaatctctcaggcaacgagtgttgatgctgtgaagcgtcttcgttgttcttcgcgcttggatgatttacagtcagttgatattgttgttgaggctattgtggagtctgaacaagtgaagaaatctttatttgctaacttggataagattgtaaagagttctgctattttggcttctaatacaagctctatttccattactcgtctagcatctgcaacgagccgaccctctcaggtgatcggcatgcactttatgaatcctccgccgattatgaagctggttgaaattattcggggtgcagatacatcagaagacacatattgtgccactaaatgcctggcagagaggtttggtaagacagttatctgctctcaggattactctggtttcatagtaaaccgaattttgatgccaatgataaacgaagcctttcatacactgtacaccggagttgcaacaaaagaagatatcgatacaggaatgaaactaggaaccaaccatcctatgggtcctcttgaacttgcagattttatcggactggatgtttgtttgtcaatcatgaaagttcttcaagccggtctaggggacgataaatatgccccatgccctctccttgtgcagtatgttgatgctggtagacttggtaaaaagcgaggcgttggtgtatatgattaccgtaatgctgctaagaaacaggaggatcgcctcgactctgaactccttgcccttggatttgatgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="82026" stop="78758"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81726" g_stop="81565" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="162" r_length="162" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81564" i_stop="81269" i_length="296">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81268" g_stop="81047" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="163" r_stop="384" r_length="222" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81046" i_stop="80036" i_length="1011">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80035" g_stop="79923" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="385" r_stop="497" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="79922" i_stop="79453" i_length="470">
            <donor d_prob="0.857" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="79452" g_stop="79058" g_length="395"/>
          <reference_exon_boundary r_type="cDNA" r_start="498" r_stop="891" r_length="394" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E700551" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>892</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E700551" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81726" e_stop="81565"/>
          <exon e_start="81268" e_stop="81047"/>
          <exon e_start="80035" e_stop="79923"/>
          <exon e_start="79452" e_stop="79058"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGTTGGCGCCGGCCAAATGGGTGCCGGAATCGCCCAACTCGCCGCCGTCAACGGCGTCGACGTTTGGCTTTACGATTTGGATTCTGAAGCTCTTACTAAAGCTCAAAAATCTATTTCCAATAATATTCAACGCCTCCTCACCAAAGGACAAATCTCTCAGGTATTATTACTCCTTTCGTTTGAGCTGAAAGCTTTTGTAAATTGCTTGCTTTGAATTTTACGTTTTTTAATAAGATTTTGCTTGCTTTGAATTTTACGTTTTGGAGTTCTGGAATATAAAGTCAGAATTGATTCATCACAAATGTTTGAAAAATTCTTGTGAAAAAAGCTGGTTTGATTCTCAAAGTTGTACTACTTACTCTATGAAGGTGTTGTTTAGGGTTAATTTGGGAGTTATTTATAAGAAATGTGAACTGTGTTGAGTTCATGTGTTTGATGATCTCATTGATGAAACAGGCAACGAGTGTTGATGCTGTGAAGCGTCTTCGTTGTTCTTCGCGCTTGGATGATTTACAGTCAGTTGATATTGTTGTTGAGGCTATTGTGGAGTCTGAACAAGTGAAGAAATCTTTATTTGCTAACTTGGATAAGATTGTAAAGAGTTCTGCTATTTTGGCTTCTAATACAAGCTCTATTTCCATTACTCGTCTAGCATCTGCAACGAGCCGACCCTCTCAGGTTTGCTTTTCTTGGCTGTTGATTGATTGTAGACTGAAAGATGTTATATGGAACTTATTGAAAACAGAATAACTTTGTTCGTATGCAAATATGTGTGTTGAAGTTCAGGAAAATGCCAACATTCAAACAATTGCATAACTTTCTTGCTCACTTCCTTTTTTGAATCATTCAGAAGGAAGATGTGTGAAATTCATCTATATCATGTTGTCTGTCCTTTCAGACTTGTGGAATCTCAATGCCTAGGCACTCTTGCCCGAGCTGGTAGAATTTCTTGTGGTTGTATTATGGTTGCACTAGTGTGTATGTCCCATCTTTAGTAGTCATCATCACCTGTAAAAACACACATTGATTAACTTTATGATGAGATTGTCTGTATTTCTCAGGAACAACATATAGAATATTATAGTATTGGTAAGGTGAGGGAATTATCTTTCGTCGGGTCAATGAAGTGGTTGGTAAGATTGAAGGTGTAAGGCATCTCACTGCTAATCAGAAGACAAGGGACTAAAAGAACTTCTAAATGGCTGCTAAAAAGCAATACTGGAATGTCGTTGTTATGAATAACTGATAGGGAACCCCATATCTCAAAGTGATGATTTGAAGGAGGATTGATTTGCTCATAAAGAAGTTACGAGTTTAAGTCAGAGATAGAACAGACTTATGCTTGCTGCTTTTTCTTGTATATTATGTAGAATGCACTGTTCAATTCATTTTGATAGTCTTTTGGTTCCTGAAAAAACACCGGTAATGGAGTATTGTGCTCATTTCAGGCCAAAAAAGTCTTTTCTTCTTTCTTTGTGTGTGTATATGAAGTGTCTTGTATATGTTTATTTTGTTTTCTTGAAGTTATACTCATTTATTATATTTTTGGTACTTATTAAGGAACAGCAAATGATCAGCGCAAGCTGACAATGAATCAGGCACTTGTAGTCATTTCCCTCCCCAGAGTCTCCATTCATTGCTCATATATCTTCTCTTCCTTTTTTGTGTATGTTATGTCTTCATGGGCAGGTGATCGGCATGCACTTTATGAATCCTCCGCCGATTATGAAGCTGGTTGAAATTATTCGGGGTGCAGATACATCAGAAGACACATATTGTGCCACTAAATGCCTGGCAGAGAGGTGACTGATAAGAAAACCCTGCAACTAGTATTTACCTTTATATGCACGTCTCGTCAACACTTCCTTTTTTAAAAAAAATTCTGCCTTGAATATTTACGCTTTCAGATACGACAGTCATTTATAATCTACATGTCTTATGGATATAACATTTCCCAAAGCTTCACCAACCCCAAACACAATCTCTCATCCTAGCTGCAAAGGCTCATTATGTATCCCTGTTTAATGTTTGTTAATAGATGCAACCGAACAATGAGAAAGTGGTCTTCATTATGTCCCTGTCTCAAGATGTGAGATTGTTTGTTATCTATAATATGTCTACATAAACGTTTTTTCTTTTAAGCTTCATAAGCAACATGGACAAAGCTTATACAGTATCTCTTATTTCCGATATATGAAATGAATTAAAATACAGGTAAAAGAATAGTTTCTTACCCTCTGTAACTAATTTCTGATTTATCTATTATTTGCAGGTTTGGTAAGACAGTTATCTGCTCTCAGGATTACTCTGGTTTCATAGTAAACCGAATTTTGATGCCAATGATAAACGAAGCCTTTCATACACTGTACACCGGAGTTGCAACAAAAGAAGATATCGATACAGGAATGAAACTAGGAACCAACCATCCTATGGGTCCTCTTGAACTTGCAGATTTTATCGGACTGGATGTTTGTTTGTCAATCATGAAAGTTCTTCAAGCCGGTCTAGGGGACGATAAATATGCCCCATGCCCTCTCCTTGTGCAGTATGTTGATGCTGGTAGACTTGGTAAAAAGCGAGGCGTTGGTGTATATGATTACCGTAATGCTGCTAAGAAAACAGGAGGATCGCCTCGACTCTGAACTCCTTGCCCTTGGATTTGATGAA</genome_strand>
        <mrna_strand>GTTGTTGGCGCCGGCCAAATGGGTGCCGGAATCGCCCAACTCGCCGCCGTCAACGGCGTCGACGTTTGGCTTTACGATTTGGATTCTGAAGCTCTTACTAAAGCTCAAAAATCTATTTCCAATAATATTCAACGCCTCCTCACCAAAGGACAAATCTCTCAG........................................................................................................................................................................................................................................................................................................GCAACGAGTGTTGATGCTGTGAAGCGTCTTCGTTGTTCTTCGCGCTTGGATGATTTACAGTCAGTTGATATTGTTGTTGAGGCTATTGTGGAGTCTGAACAAGTGAAGAAATCTTTATTTGCTAACTTGGATAAGATTGTAAAGAGTTCTGCTATTTTGGCTTCTAATACAAGCTCTATTTCCATTACTCGTCTAGCATCTGCAACGAGCCGACCCTCTCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATCGGCATGCACTTTATGAATCCTCCGCCGATTATGAAGCTGGTTGAAATTATTCGGGGTGCAGATACATCAGAAGACACATATTGTGCCACTAAATGCCTGGCAGAGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGTAAGACAGTTATCTGCTCTCAGGATTACTCTGGTTTCATAGTAAACCGAATTTTGATGCCAATGATAAACGAAGCCTTTCATACACTGTACACCGGAGTTGCAACAAAAGAAGATATCGATACAGGAATGAAACTAGGAACCAACCATCCTATGGGTCCTCTTGAACTTGCAGATTTTATCGGACTGGATGTTTGTTTGTCAATCATGAAAGTTCTTCAAGCCGGTCTAGGGGACGATAAATATGCCCCATGCCCTCTCCTTGTGCAGTATGTTGATGCTGGTAGACTTGGTAAAAAGCGAGGCGTTGGTGTATATGATTACCGTAATGCTGCTAAG-AAACAGGAGGATCGCCTCGACTCTGAACTCCTTGCCCTTGGATTTGATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E727528" ref_strand="+" ref_description="SGN-E727528 [LA14DH04]">
      <seq>cgaattttttaggcatggccgatataacaaggatcggagttgttggcgccggccaaatgggtgccggaatcgcccaactcgccgccgtcaacggcgtcgacgtttggctttacgatttggattctgaagctcttactaaagctcaaaaatctatttccaataatattcaacgcctcctcaccaaaggacaaatctctcaggcaacgagtgttgatgctgtgaagcgtcttcgttgttcttcgcgcttggatgatttacagtcagttgatattgttgttgaggctattgtggagtctgaacaagtgaagaaatctttatttgctaacttggataagattgtaaagagttctgctattttggcttctaatacaagctctatttccattactcgtctagcatctgcaacgagccgaccctctcaggtgatcggcatgcactttatgaatcctccgccgattatgaagctggttgaaattattcggggtgcagatacatcagaagacacatattgtgccactaaatgcctggcagagaggtttggtaagacagttatctgctctcaggattactctggtttcatagtaaaccgaattttgatgccaatgataaacgaagcctttcatacactgtacaccggagttgcaacaaaagaagatatcgatacaggaatgaaactaggaaccaaccatcctatgggtcctcttgaacttgcagattttatcggactggatgtttgtttgtcaatcatgaaagttcttcaagccggtctaggggacgataaatatgccccatgccctctccttgtgcagtatgttgatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="82062" stop="78868"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81764" g_stop="81565" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="200" r_length="200" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81564" i_stop="81269" i_length="296">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81268" g_stop="81047" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="201" r_stop="422" r_length="222" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81046" i_stop="80036" i_length="1011">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80035" g_stop="79923" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="423" r_stop="535" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="79922" i_stop="79453" i_length="470">
            <donor d_prob="0.857" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="79452" g_stop="79168" g_length="285"/>
          <reference_exon_boundary r_type="cDNA" r_start="536" r_stop="820" r_length="285" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E727528" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>820</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E727528" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81764" e_stop="81565"/>
          <exon e_start="81268" e_stop="81047"/>
          <exon e_start="80035" e_stop="79923"/>
          <exon e_start="79452" e_stop="79168"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAATTTTTTAGGCATGGCCGATATAACAAGGATCGGAGTTGTTGGCGCCGGCCAAATGGGTGCCGGAATCGCCCAACTCGCCGCCGTCAACGGCGTCGACGTTTGGCTTTACGATTTGGATTCTGAAGCTCTTACTAAAGCTCAAAAATCTATTTCCAATAATATTCAACGCCTCCTCACCAAAGGACAAATCTCTCAGGTATTATTACTCCTTTCGTTTGAGCTGAAAGCTTTTGTAAATTGCTTGCTTTGAATTTTACGTTTTTTAATAAGATTTTGCTTGCTTTGAATTTTACGTTTTGGAGTTCTGGAATATAAAGTCAGAATTGATTCATCACAAATGTTTGAAAAATTCTTGTGAAAAAAGCTGGTTTGATTCTCAAAGTTGTACTACTTACTCTATGAAGGTGTTGTTTAGGGTTAATTTGGGAGTTATTTATAAGAAATGTGAACTGTGTTGAGTTCATGTGTTTGATGATCTCATTGATGAAACAGGCAACGAGTGTTGATGCTGTGAAGCGTCTTCGTTGTTCTTCGCGCTTGGATGATTTACAGTCAGTTGATATTGTTGTTGAGGCTATTGTGGAGTCTGAACAAGTGAAGAAATCTTTATTTGCTAACTTGGATAAGATTGTAAAGAGTTCTGCTATTTTGGCTTCTAATACAAGCTCTATTTCCATTACTCGTCTAGCATCTGCAACGAGCCGACCCTCTCAGGTTTGCTTTTCTTGGCTGTTGATTGATTGTAGACTGAAAGATGTTATATGGAACTTATTGAAAACAGAATAACTTTGTTCGTATGCAAATATGTGTGTTGAAGTTCAGGAAAATGCCAACATTCAAACAATTGCATAACTTTCTTGCTCACTTCCTTTTTTGAATCATTCAGAAGGAAGATGTGTGAAATTCATCTATATCATGTTGTCTGTCCTTTCAGACTTGTGGAATCTCAATGCCTAGGCACTCTTGCCCGAGCTGGTAGAATTTCTTGTGGTTGTATTATGGTTGCACTAGTGTGTATGTCCCATCTTTAGTAGTCATCATCACCTGTAAAAACACACATTGATTAACTTTATGATGAGATTGTCTGTATTTCTCAGGAACAACATATAGAATATTATAGTATTGGTAAGGTGAGGGAATTATCTTTCGTCGGGTCAATGAAGTGGTTGGTAAGATTGAAGGTGTAAGGCATCTCACTGCTAATCAGAAGACAAGGGACTAAAAGAACTTCTAAATGGCTGCTAAAAAGCAATACTGGAATGTCGTTGTTATGAATAACTGATAGGGAACCCCATATCTCAAAGTGATGATTTGAAGGAGGATTGATTTGCTCATAAAGAAGTTACGAGTTTAAGTCAGAGATAGAACAGACTTATGCTTGCTGCTTTTTCTTGTATATTATGTAGAATGCACTGTTCAATTCATTTTGATAGTCTTTTGGTTCCTGAAAAAACACCGGTAATGGAGTATTGTGCTCATTTCAGGCCAAAAAAGTCTTTTCTTCTTTCTTTGTGTGTGTATATGAAGTGTCTTGTATATGTTTATTTTGTTTTCTTGAAGTTATACTCATTTATTATATTTTTGGTACTTATTAAGGAACAGCAAATGATCAGCGCAAGCTGACAATGAATCAGGCACTTGTAGTCATTTCCCTCCCCAGAGTCTCCATTCATTGCTCATATATCTTCTCTTCCTTTTTTGTGTATGTTATGTCTTCATGGGCAGGTGATCGGCATGCACTTTATGAATCCTCCGCCGATTATGAAGCTGGTTGAAATTATTCGGGGTGCAGATACATCAGAAGACACATATTGTGCCACTAAATGCCTGGCAGAGAGGTGACTGATAAGAAAACCCTGCAACTAGTATTTACCTTTATATGCACGTCTCGTCAACACTTCCTTTTTTAAAAAAAATTCTGCCTTGAATATTTACGCTTTCAGATACGACAGTCATTTATAATCTACATGTCTTATGGATATAACATTTCCCAAAGCTTCACCAACCCCAAACACAATCTCTCATCCTAGCTGCAAAGGCTCATTATGTATCCCTGTTTAATGTTTGTTAATAGATGCAACCGAACAATGAGAAAGTGGTCTTCATTATGTCCCTGTCTCAAGATGTGAGATTGTTTGTTATCTATAATATGTCTACATAAACGTTTTTTCTTTTAAGCTTCATAAGCAACATGGACAAAGCTTATACAGTATCTCTTATTTCCGATATATGAAATGAATTAAAATACAGGTAAAAGAATAGTTTCTTACCCTCTGTAACTAATTTCTGATTTATCTATTATTTGCAGGTTTGGTAAGACAGTTATCTGCTCTCAGGATTACTCTGGTTTCATAGTAAACCGAATTTTGATGCCAATGATAAACGAAGCCTTTCATACACTGTACACCGGAGTTGCAACAAAAGAAGATATCGATACAGGAATGAAACTAGGAACCAACCATCCTATGGGTCCTCTTGAACTTGCAGATTTTATCGGACTGGATGTTTGTTTGTCAATCATGAAAGTTCTTCAAGCCGGTCTAGGGGACGATAAATATGCCCCATGCCCTCTCCTTGTGCAGTATGTTGATGC</genome_strand>
        <mrna_strand>CGAATTTTTTAGGCATGGCCGATATAACAAGGATCGGAGTTGTTGGCGCCGGCCAAATGGGTGCCGGAATCGCCCAACTCGCCGCCGTCAACGGCGTCGACGTTTGGCTTTACGATTTGGATTCTGAAGCTCTTACTAAAGCTCAAAAATCTATTTCCAATAATATTCAACGCCTCCTCACCAAAGGACAAATCTCTCAG........................................................................................................................................................................................................................................................................................................GCAACGAGTGTTGATGCTGTGAAGCGTCTTCGTTGTTCTTCGCGCTTGGATGATTTACAGTCAGTTGATATTGTTGTTGAGGCTATTGTGGAGTCTGAACAAGTGAAGAAATCTTTATTTGCTAACTTGGATAAGATTGTAAAGAGTTCTGCTATTTTGGCTTCTAATACAAGCTCTATTTCCATTACTCGTCTAGCATCTGCAACGAGCCGACCCTCTCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATCGGCATGCACTTTATGAATCCTCCGCCGATTATGAAGCTGGTTGAAATTATTCGGGGTGCAGATACATCAGAAGACACATATTGTGCCACTAAATGCCTGGCAGAGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGTAAGACAGTTATCTGCTCTCAGGATTACTCTGGTTTCATAGTAAACCGAATTTTGATGCCAATGATAAACGAAGCCTTTCATACACTGTACACCGGAGTTGCAACAAAAGAAGATATCGATACAGGAATGAAACTAGGAACCAACCATCCTATGGGTCCTCTTGAACTTGCAGATTTTATCGGACTGGATGTTTGTTTGTCAATCATGAAAGTTCTTCAAGCCGGTCTAGGGGACGATAAATATGCCCCATGCCCTCTCCTTGTGCAGTATGTTGATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E455319" ref_strand="+" ref_description="SGN-E455319 [cSTS-25-P16]">
      <seq>caaggatcggagttgttggcgccggccaaatgggtgccggaattgctcaactcgccgccgtcaacggcgtcgacgtttggctttacgatttggattctgaagctcttactaaagcccaaaaatctatttccaataatattcaacgcctcctcaccaaaggacaaatctctcaggcaacgagtgtggatgctgtgaagcgtcttcgttgttcatcgcgcttggaagatttacattcagttgatattgttgttgaggctattgtggaatctgaacaagtgaagaaaactttatttgctaacttggataagattgtaaagagctctgctattttggcttctaatacaagctctatttccattactcgtctagcatctgcaacgagccgaccttcccaggtgatcggcatgcactttatgaatcctccaccgattatgaagctggttgaaattatccgtggtgcagatacatcagaagacacatattgtgccactaaatgcctggcagagaggtttggtaagacagttatctgctctcaggattactctggcttcatagtaaaccgaattttgatgccaatgataaacgaagcttttcatacactgtacacccggtgttgcaacaaaagaagacattgatacgggaatgaaactaggaaccaaccatccntatgggtcctttggaacttgcagattttatcggactgggatgtttgtttatcaatcatggaaagttcttcaagccggtctaggggacgataaatatgccccatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="82037" stop="78895"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81737" g_stop="81565" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81564" i_stop="81269" i_length="296">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81268" g_stop="81047" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="395" r_length="222" r_score="0.959"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81046" i_stop="80036" i_length="1011">
            <donor d_prob="0.993" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80035" g_stop="79923" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="396" r_stop="508" r_length="113" r_score="0.973"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="79922" i_stop="79453" i_length="470">
            <donor d_prob="0.857" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="79452" g_stop="79195" g_length="258"/>
          <reference_exon_boundary r_type="cDNA" r_start="509" r_stop="770" r_length="262" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E455319" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>766</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E455319" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81737" e_stop="81565"/>
          <exon e_start="81268" e_stop="81047"/>
          <exon e_start="80035" e_stop="79923"/>
          <exon e_start="79452" e_stop="79195"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGGATCGGAGTTGTTGGCGCCGGCCAAATGGGTGCCGGAATCGCCCAACTCGCCGCCGTCAACGGCGTCGACGTTTGGCTTTACGATTTGGATTCTGAAGCTCTTACTAAAGCTCAAAAATCTATTTCCAATAATATTCAACGCCTCCTCACCAAAGGACAAATCTCTCAGGTATTATTACTCCTTTCGTTTGAGCTGAAAGCTTTTGTAAATTGCTTGCTTTGAATTTTACGTTTTTTAATAAGATTTTGCTTGCTTTGAATTTTACGTTTTGGAGTTCTGGAATATAAAGTCAGAATTGATTCATCACAAATGTTTGAAAAATTCTTGTGAAAAAAGCTGGTTTGATTCTCAAAGTTGTACTACTTACTCTATGAAGGTGTTGTTTAGGGTTAATTTGGGAGTTATTTATAAGAAATGTGAACTGTGTTGAGTTCATGTGTTTGATGATCTCATTGATGAAACAGGCAACGAGTGTTGATGCTGTGAAGCGTCTTCGTTGTTCTTCGCGCTTGGATGATTTACAGTCAGTTGATATTGTTGTTGAGGCTATTGTGGAGTCTGAACAAGTGAAGAAATCTTTATTTGCTAACTTGGATAAGATTGTAAAGAGTTCTGCTATTTTGGCTTCTAATACAAGCTCTATTTCCATTACTCGTCTAGCATCTGCAACGAGCCGACCCTCTCAGGTTTGCTTTTCTTGGCTGTTGATTGATTGTAGACTGAAAGATGTTATATGGAACTTATTGAAAACAGAATAACTTTGTTCGTATGCAAATATGTGTGTTGAAGTTCAGGAAAATGCCAACATTCAAACAATTGCATAACTTTCTTGCTCACTTCCTTTTTTGAATCATTCAGAAGGAAGATGTGTGAAATTCATCTATATCATGTTGTCTGTCCTTTCAGACTTGTGGAATCTCAATGCCTAGGCACTCTTGCCCGAGCTGGTAGAATTTCTTGTGGTTGTATTATGGTTGCACTAGTGTGTATGTCCCATCTTTAGTAGTCATCATCACCTGTAAAAACACACATTGATTAACTTTATGATGAGATTGTCTGTATTTCTCAGGAACAACATATAGAATATTATAGTATTGGTAAGGTGAGGGAATTATCTTTCGTCGGGTCAATGAAGTGGTTGGTAAGATTGAAGGTGTAAGGCATCTCACTGCTAATCAGAAGACAAGGGACTAAAAGAACTTCTAAATGGCTGCTAAAAAGCAATACTGGAATGTCGTTGTTATGAATAACTGATAGGGAACCCCATATCTCAAAGTGATGATTTGAAGGAGGATTGATTTGCTCATAAAGAAGTTACGAGTTTAAGTCAGAGATAGAACAGACTTATGCTTGCTGCTTTTTCTTGTATATTATGTAGAATGCACTGTTCAATTCATTTTGATAGTCTTTTGGTTCCTGAAAAAACACCGGTAATGGAGTATTGTGCTCATTTCAGGCCAAAAAAGTCTTTTCTTCTTTCTTTGTGTGTGTATATGAAGTGTCTTGTATATGTTTATTTTGTTTTCTTGAAGTTATACTCATTTATTATATTTTTGGTACTTATTAAGGAACAGCAAATGATCAGCGCAAGCTGACAATGAATCAGGCACTTGTAGTCATTTCCCTCCCCAGAGTCTCCATTCATTGCTCATATATCTTCTCTTCCTTTTTTGTGTATGTTATGTCTTCATGGGCAGGTGATCGGCATGCACTTTATGAATCCTCCGCCGATTATGAAGCTGGTTGAAATTATTCGGGGTGCAGATACATCAGAAGACACATATTGTGCCACTAAATGCCTGGCAGAGAGGTGACTGATAAGAAAACCCTGCAACTAGTATTTACCTTTATATGCACGTCTCGTCAACACTTCCTTTTTTAAAAAAAATTCTGCCTTGAATATTTACGCTTTCAGATACGACAGTCATTTATAATCTACATGTCTTATGGATATAACATTTCCCAAAGCTTCACCAACCCCAAACACAATCTCTCATCCTAGCTGCAAAGGCTCATTATGTATCCCTGTTTAATGTTTGTTAATAGATGCAACCGAACAATGAGAAAGTGGTCTTCATTATGTCCCTGTCTCAAGATGTGAGATTGTTTGTTATCTATAATATGTCTACATAAACGTTTTTTCTTTTAAGCTTCATAAGCAACATGGACAAAGCTTATACAGTATCTCTTATTTCCGATATATGAAATGAATTAAAATACAGGTAAAAGAATAGTTTCTTACCCTCTGTAACTAATTTCTGATTTATCTATTATTTGCAGGTTTGGTAAGACAGTTATCTGCTCTCAGGATTACTCTGGTTTCATAGTAAACCGAATTTTGATGCCAATGATAAACGAAGCCTTTCATACACTGTACA-CCGGAGTTGCAACAAAAGAAGATATCGATACAGGAATGAAACTAGGAACCAACCATCC-TATGGGTCCTCTTGAACTTGCAGATTTTATCGGACT-GGATGTTTGTTTGTCAATCAT-GAAAGTTCTTCAAGCCGGTCTAGGGGACGATAAATATGCCCCATG</genome_strand>
        <mrna_strand>CAAGGATCGGAGTTGTTGGCGCCGGCCAAATGGGTGCCGGAATTGCTCAACTCGCCGCCGTCAACGGCGTCGACGTTTGGCTTTACGATTTGGATTCTGAAGCTCTTACTAAAGCCCAAAAATCTATTTCCAATAATATTCAACGCCTCCTCACCAAAGGACAAATCTCTCAG........................................................................................................................................................................................................................................................................................................GCAACGAGTGTGGATGCTGTGAAGCGTCTTCGTTGTTCATCGCGCTTGGAAGATTTACATTCAGTTGATATTGTTGTTGAGGCTATTGTGGAATCTGAACAAGTGAAGAAAACTTTATTTGCTAACTTGGATAAGATTGTAAAGAGCTCTGCTATTTTGGCTTCTAATACAAGCTCTATTTCCATTACTCGTCTAGCATCTGCAACGAGCCGACCTTCCCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATCGGCATGCACTTTATGAATCCTCCACCGATTATGAAGCTGGTTGAAATTATCCGTGGTGCAGATACATCAGAAGACACATATTGTGCCACTAAATGCCTGGCAGAGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGTAAGACAGTTATCTGCTCTCAGGATTACTCTGGCTTCATAGTAAACCGAATTTTGATGCCAATGATAAACGAAGCTTTTCATACACTGTACACCCGGTGTTGCAACAAAAGAAGACATTGATACGGGAATGAAACTAGGAACCAACCATCCNTATGGGTCCTTTGGAACTTGCAGATTTTATCGGACTGGGATGTTTGTTTATCAATCATGGAAAGTTCTTCAAGCCGGTCTAGGGGACGATAAATATGCCCCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E375215" ref_strand="+" ref_description="SGN-E375215 [TUS-34-B11]">
      <seq>gccggccaaatgggtgccggaatcgcccaactcgccgccgtcaacggcgtcgacgtttggctttacgatttggattctgaagctcttactaaagctcaaaaatctatttccaataatattcaacgcctcctcaccaaaggacaaatctctcaggcaacgagtgttgatgctgtgaagcgtcttcgttgttcttcgcgcttggatgatttacagtcagttgatattgttgttgaggctattgtggagtctgaacaagtgaagaaatctttatttgctaacttggataagattgtaaagagttctgctattttggcttctaatacaagctctatttccattactcgtctagcatctgcaacgagccgaccctctcaggtgatcggcatgcactttatgaatcctccgccgattatgaagctggttgaaattattcggggtgcagatacatcagaagacacatattgtgccactaaatgcctggcagagaggtttggtaagacagttatctgctctcaggattactctggtttcatagtaaaccgaattttgatgccaatgataaacgaagcctttcatacactgtacaccggagttgcaacaaaagaagatatcgatacaggaatgaaactaggaaccaaccatcctatgggtcctcttgaacttgcagattttatcggactggatgtttgtttgtcaatcatgaaagttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="82017" stop="78932"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81717" g_stop="81565" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="153" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81564" i_stop="81269" i_length="296">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81268" g_stop="81047" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="154" r_stop="375" r_length="222" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81046" i_stop="80036" i_length="1011">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80035" g_stop="79923" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="376" r_stop="488" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="79922" i_stop="79453" i_length="470">
            <donor d_prob="0.857" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="79452" g_stop="79232" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="489" r_stop="709" r_length="221" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E375215" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>709</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E375215" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81717" e_stop="81565"/>
          <exon e_start="81268" e_stop="81047"/>
          <exon e_start="80035" e_stop="79923"/>
          <exon e_start="79452" e_stop="79232"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCGGCCAAATGGGTGCCGGAATCGCCCAACTCGCCGCCGTCAACGGCGTCGACGTTTGGCTTTACGATTTGGATTCTGAAGCTCTTACTAAAGCTCAAAAATCTATTTCCAATAATATTCAACGCCTCCTCACCAAAGGACAAATCTCTCAGGTATTATTACTCCTTTCGTTTGAGCTGAAAGCTTTTGTAAATTGCTTGCTTTGAATTTTACGTTTTTTAATAAGATTTTGCTTGCTTTGAATTTTACGTTTTGGAGTTCTGGAATATAAAGTCAGAATTGATTCATCACAAATGTTTGAAAAATTCTTGTGAAAAAAGCTGGTTTGATTCTCAAAGTTGTACTACTTACTCTATGAAGGTGTTGTTTAGGGTTAATTTGGGAGTTATTTATAAGAAATGTGAACTGTGTTGAGTTCATGTGTTTGATGATCTCATTGATGAAACAGGCAACGAGTGTTGATGCTGTGAAGCGTCTTCGTTGTTCTTCGCGCTTGGATGATTTACAGTCAGTTGATATTGTTGTTGAGGCTATTGTGGAGTCTGAACAAGTGAAGAAATCTTTATTTGCTAACTTGGATAAGATTGTAAAGAGTTCTGCTATTTTGGCTTCTAATACAAGCTCTATTTCCATTACTCGTCTAGCATCTGCAACGAGCCGACCCTCTCAGGTTTGCTTTTCTTGGCTGTTGATTGATTGTAGACTGAAAGATGTTATATGGAACTTATTGAAAACAGAATAACTTTGTTCGTATGCAAATATGTGTGTTGAAGTTCAGGAAAATGCCAACATTCAAACAATTGCATAACTTTCTTGCTCACTTCCTTTTTTGAATCATTCAGAAGGAAGATGTGTGAAATTCATCTATATCATGTTGTCTGTCCTTTCAGACTTGTGGAATCTCAATGCCTAGGCACTCTTGCCCGAGCTGGTAGAATTTCTTGTGGTTGTATTATGGTTGCACTAGTGTGTATGTCCCATCTTTAGTAGTCATCATCACCTGTAAAAACACACATTGATTAACTTTATGATGAGATTGTCTGTATTTCTCAGGAACAACATATAGAATATTATAGTATTGGTAAGGTGAGGGAATTATCTTTCGTCGGGTCAATGAAGTGGTTGGTAAGATTGAAGGTGTAAGGCATCTCACTGCTAATCAGAAGACAAGGGACTAAAAGAACTTCTAAATGGCTGCTAAAAAGCAATACTGGAATGTCGTTGTTATGAATAACTGATAGGGAACCCCATATCTCAAAGTGATGATTTGAAGGAGGATTGATTTGCTCATAAAGAAGTTACGAGTTTAAGTCAGAGATAGAACAGACTTATGCTTGCTGCTTTTTCTTGTATATTATGTAGAATGCACTGTTCAATTCATTTTGATAGTCTTTTGGTTCCTGAAAAAACACCGGTAATGGAGTATTGTGCTCATTTCAGGCCAAAAAAGTCTTTTCTTCTTTCTTTGTGTGTGTATATGAAGTGTCTTGTATATGTTTATTTTGTTTTCTTGAAGTTATACTCATTTATTATATTTTTGGTACTTATTAAGGAACAGCAAATGATCAGCGCAAGCTGACAATGAATCAGGCACTTGTAGTCATTTCCCTCCCCAGAGTCTCCATTCATTGCTCATATATCTTCTCTTCCTTTTTTGTGTATGTTATGTCTTCATGGGCAGGTGATCGGCATGCACTTTATGAATCCTCCGCCGATTATGAAGCTGGTTGAAATTATTCGGGGTGCAGATACATCAGAAGACACATATTGTGCCACTAAATGCCTGGCAGAGAGGTGACTGATAAGAAAACCCTGCAACTAGTATTTACCTTTATATGCACGTCTCGTCAACACTTCCTTTTTTAAAAAAAATTCTGCCTTGAATATTTACGCTTTCAGATACGACAGTCATTTATAATCTACATGTCTTATGGATATAACATTTCCCAAAGCTTCACCAACCCCAAACACAATCTCTCATCCTAGCTGCAAAGGCTCATTATGTATCCCTGTTTAATGTTTGTTAATAGATGCAACCGAACAATGAGAAAGTGGTCTTCATTATGTCCCTGTCTCAAGATGTGAGATTGTTTGTTATCTATAATATGTCTACATAAACGTTTTTTCTTTTAAGCTTCATAAGCAACATGGACAAAGCTTATACAGTATCTCTTATTTCCGATATATGAAATGAATTAAAATACAGGTAAAAGAATAGTTTCTTACCCTCTGTAACTAATTTCTGATTTATCTATTATTTGCAGGTTTGGTAAGACAGTTATCTGCTCTCAGGATTACTCTGGTTTCATAGTAAACCGAATTTTGATGCCAATGATAAACGAAGCCTTTCATACACTGTACACCGGAGTTGCAACAAAAGAAGATATCGATACAGGAATGAAACTAGGAACCAACCATCCTATGGGTCCTCTTGAACTTGCAGATTTTATCGGACTGGATGTTTGTTTGTCAATCATGAAAGTTC</genome_strand>
        <mrna_strand>GCCGGCCAAATGGGTGCCGGAATCGCCCAACTCGCCGCCGTCAACGGCGTCGACGTTTGGCTTTACGATTTGGATTCTGAAGCTCTTACTAAAGCTCAAAAATCTATTTCCAATAATATTCAACGCCTCCTCACCAAAGGACAAATCTCTCAG........................................................................................................................................................................................................................................................................................................GCAACGAGTGTTGATGCTGTGAAGCGTCTTCGTTGTTCTTCGCGCTTGGATGATTTACAGTCAGTTGATATTGTTGTTGAGGCTATTGTGGAGTCTGAACAAGTGAAGAAATCTTTATTTGCTAACTTGGATAAGATTGTAAAGAGTTCTGCTATTTTGGCTTCTAATACAAGCTCTATTTCCATTACTCGTCTAGCATCTGCAACGAGCCGACCCTCTCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATCGGCATGCACTTTATGAATCCTCCGCCGATTATGAAGCTGGTTGAAATTATTCGGGGTGCAGATACATCAGAAGACACATATTGTGCCACTAAATGCCTGGCAGAGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGTAAGACAGTTATCTGCTCTCAGGATTACTCTGGTTTCATAGTAAACCGAATTTTGATGCCAATGATAAACGAAGCCTTTCATACACTGTACACCGGAGTTGCAACAAAAGAAGATATCGATACAGGAATGAAACTAGGAACCAACCATCCTATGGGTCCTCTTGAACTTGCAGATTTTATCGGACTGGATGTTTGTTTGTCAATCATGAAAGTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E375433" ref_strand="+" ref_description="SGN-E375433 [TUS-34-B12]">
      <seq>gccggccaaatgggtgccggaatcgcccaactcgccgccgtcaacggcgtcgacgtttggctttacgatttggattctgaagctcttactaaagctcaaaaatctatttccaataatattcaacgcctcctcaccaaaggacaaatctctcaggcaacgagtgttgatgctgtgaagcgtcttcgttgttcttcgcgcttggatgatttacagtcagttgatattgttgttgaggctattgtggagtctgaacaagtgaagaaatctttatttgctaacttggataagattgtaaagagttctgctattttggcttctaatacaagctctatttccattactcgtctagcatctgcaacgagccgaccctctcaggtgatcggcatgcactttatgaatcctccgccgattatgaagctggttgaaattattcggggtgcagatacatcagaagacacatattgtgccactaaatgcctggcagagaggtttggtaagacagttatctgctctcaggattactctggtttcatagtaaaccgaattttgatgccaatgataaacgaagcctttcatacactgtacaccggagttgcaacaaaagaagatatcgatacaggaatgaaactaggaaccaaccatcctatgggtcctcttgaacttgcagattttatcggactggatgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="82017" stop="78954"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81717" g_stop="81565" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="153" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81564" i_stop="81269" i_length="296">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81268" g_stop="81047" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="154" r_stop="375" r_length="222" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81046" i_stop="80036" i_length="1011">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80035" g_stop="79923" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="376" r_stop="488" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="79922" i_stop="79453" i_length="470">
            <donor d_prob="0.857" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="79452" g_stop="79254" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="489" r_stop="687" r_length="199" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E375433" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>687</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E375433" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81717" e_stop="81565"/>
          <exon e_start="81268" e_stop="81047"/>
          <exon e_start="80035" e_stop="79923"/>
          <exon e_start="79452" e_stop="79254"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCGGCCAAATGGGTGCCGGAATCGCCCAACTCGCCGCCGTCAACGGCGTCGACGTTTGGCTTTACGATTTGGATTCTGAAGCTCTTACTAAAGCTCAAAAATCTATTTCCAATAATATTCAACGCCTCCTCACCAAAGGACAAATCTCTCAGGTATTATTACTCCTTTCGTTTGAGCTGAAAGCTTTTGTAAATTGCTTGCTTTGAATTTTACGTTTTTTAATAAGATTTTGCTTGCTTTGAATTTTACGTTTTGGAGTTCTGGAATATAAAGTCAGAATTGATTCATCACAAATGTTTGAAAAATTCTTGTGAAAAAAGCTGGTTTGATTCTCAAAGTTGTACTACTTACTCTATGAAGGTGTTGTTTAGGGTTAATTTGGGAGTTATTTATAAGAAATGTGAACTGTGTTGAGTTCATGTGTTTGATGATCTCATTGATGAAACAGGCAACGAGTGTTGATGCTGTGAAGCGTCTTCGTTGTTCTTCGCGCTTGGATGATTTACAGTCAGTTGATATTGTTGTTGAGGCTATTGTGGAGTCTGAACAAGTGAAGAAATCTTTATTTGCTAACTTGGATAAGATTGTAAAGAGTTCTGCTATTTTGGCTTCTAATACAAGCTCTATTTCCATTACTCGTCTAGCATCTGCAACGAGCCGACCCTCTCAGGTTTGCTTTTCTTGGCTGTTGATTGATTGTAGACTGAAAGATGTTATATGGAACTTATTGAAAACAGAATAACTTTGTTCGTATGCAAATATGTGTGTTGAAGTTCAGGAAAATGCCAACATTCAAACAATTGCATAACTTTCTTGCTCACTTCCTTTTTTGAATCATTCAGAAGGAAGATGTGTGAAATTCATCTATATCATGTTGTCTGTCCTTTCAGACTTGTGGAATCTCAATGCCTAGGCACTCTTGCCCGAGCTGGTAGAATTTCTTGTGGTTGTATTATGGTTGCACTAGTGTGTATGTCCCATCTTTAGTAGTCATCATCACCTGTAAAAACACACATTGATTAACTTTATGATGAGATTGTCTGTATTTCTCAGGAACAACATATAGAATATTATAGTATTGGTAAGGTGAGGGAATTATCTTTCGTCGGGTCAATGAAGTGGTTGGTAAGATTGAAGGTGTAAGGCATCTCACTGCTAATCAGAAGACAAGGGACTAAAAGAACTTCTAAATGGCTGCTAAAAAGCAATACTGGAATGTCGTTGTTATGAATAACTGATAGGGAACCCCATATCTCAAAGTGATGATTTGAAGGAGGATTGATTTGCTCATAAAGAAGTTACGAGTTTAAGTCAGAGATAGAACAGACTTATGCTTGCTGCTTTTTCTTGTATATTATGTAGAATGCACTGTTCAATTCATTTTGATAGTCTTTTGGTTCCTGAAAAAACACCGGTAATGGAGTATTGTGCTCATTTCAGGCCAAAAAAGTCTTTTCTTCTTTCTTTGTGTGTGTATATGAAGTGTCTTGTATATGTTTATTTTGTTTTCTTGAAGTTATACTCATTTATTATATTTTTGGTACTTATTAAGGAACAGCAAATGATCAGCGCAAGCTGACAATGAATCAGGCACTTGTAGTCATTTCCCTCCCCAGAGTCTCCATTCATTGCTCATATATCTTCTCTTCCTTTTTTGTGTATGTTATGTCTTCATGGGCAGGTGATCGGCATGCACTTTATGAATCCTCCGCCGATTATGAAGCTGGTTGAAATTATTCGGGGTGCAGATACATCAGAAGACACATATTGTGCCACTAAATGCCTGGCAGAGAGGTGACTGATAAGAAAACCCTGCAACTAGTATTTACCTTTATATGCACGTCTCGTCAACACTTCCTTTTTTAAAAAAAATTCTGCCTTGAATATTTACGCTTTCAGATACGACAGTCATTTATAATCTACATGTCTTATGGATATAACATTTCCCAAAGCTTCACCAACCCCAAACACAATCTCTCATCCTAGCTGCAAAGGCTCATTATGTATCCCTGTTTAATGTTTGTTAATAGATGCAACCGAACAATGAGAAAGTGGTCTTCATTATGTCCCTGTCTCAAGATGTGAGATTGTTTGTTATCTATAATATGTCTACATAAACGTTTTTTCTTTTAAGCTTCATAAGCAACATGGACAAAGCTTATACAGTATCTCTTATTTCCGATATATGAAATGAATTAAAATACAGGTAAAAGAATAGTTTCTTACCCTCTGTAACTAATTTCTGATTTATCTATTATTTGCAGGTTTGGTAAGACAGTTATCTGCTCTCAGGATTACTCTGGTTTCATAGTAAACCGAATTTTGATGCCAATGATAAACGAAGCCTTTCATACACTGTACACCGGAGTTGCAACAAAAGAAGATATCGATACAGGAATGAAACTAGGAACCAACCATCCTATGGGTCCTCTTGAACTTGCAGATTTTATCGGACTGGATGTT</genome_strand>
        <mrna_strand>GCCGGCCAAATGGGTGCCGGAATCGCCCAACTCGCCGCCGTCAACGGCGTCGACGTTTGGCTTTACGATTTGGATTCTGAAGCTCTTACTAAAGCTCAAAAATCTATTTCCAATAATATTCAACGCCTCCTCACCAAAGGACAAATCTCTCAG........................................................................................................................................................................................................................................................................................................GCAACGAGTGTTGATGCTGTGAAGCGTCTTCGTTGTTCTTCGCGCTTGGATGATTTACAGTCAGTTGATATTGTTGTTGAGGCTATTGTGGAGTCTGAACAAGTGAAGAAATCTTTATTTGCTAACTTGGATAAGATTGTAAAGAGTTCTGCTATTTTGGCTTCTAATACAAGCTCTATTTCCATTACTCGTCTAGCATCTGCAACGAGCCGACCCTCTCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATCGGCATGCACTTTATGAATCCTCCGCCGATTATGAAGCTGGTTGAAATTATTCGGGGTGCAGATACATCAGAAGACACATATTGTGCCACTAAATGCCTGGCAGAGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGTAAGACAGTTATCTGCTCTCAGGATTACTCTGGTTTCATAGTAAACCGAATTTTGATGCCAATGATAAACGAAGCCTTTCATACACTGTACACCGGAGTTGCAACAAAAGAAGATATCGATACAGGAATGAAACTAGGAACCAACCATCCTATGGGTCCTCTTGAACTTGCAGATTTTATCGGACTGGATGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E450385" ref_strand="+" ref_description="SGN-E450385 [cSTS-9-O19]">
      <seq>atggccgatatcacaagaatgggagttgttggcgccggccaaatgggcgcccggaattgctcaactcgccgccgtcaacggcgtcgacgttttgctttacgatttggattctgaagctcttactaaagcccaaaaatctatttccaataatattcaacgtctcctcaccaaagggcaaatctctcaggcaacgagtgtggatgctgtgaagcgtcttcgttgttcatcgcgcttggaagatttacattcagttgatattgttgttgaggctattgtggaatctgaacaagtgaagaaatctttatttgctaacttggataagattgtaaagagttctgctattttggcttctaatacaagctctatttccattactcgtctagcatctgctacgagccgaccttcccaggtgattggcatgcactttatgaatcctccaccgattatgaagctggttgaaattatccgtggtgcagatacatcagaagacacatattgtgccactaaatgcctggcagagaggtttggtaaaacagttatctgctctcaggattactctggcttcatagtaaaccgaattttgatgccaatgataaacgaagcttttcatacactgtacaccggntgttgcaacaaaagaagacattgataccggaatgaaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="82050" stop="79012"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81750" g_stop="81565" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="187" r_length="187" r_score="0.935"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81564" i_stop="81269" i_length="296">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.927" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81268" g_stop="81047" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="409" r_length="222" r_score="0.964"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81046" i_stop="80036" i_length="1011">
            <donor d_prob="0.993" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80035" g_stop="79923" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="410" r_stop="522" r_length="113" r_score="0.965"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="79922" i_stop="79453" i_length="470">
            <donor d_prob="0.857" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="79452" g_stop="79312" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="523" r_stop="664" r_length="142" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E450385" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>662</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E450385" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81750" e_stop="81565"/>
          <exon e_start="81268" e_stop="81047"/>
          <exon e_start="80035" e_stop="79923"/>
          <exon e_start="79452" e_stop="79312"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGCCGATATAACAAGGATCGGAGTTGTTGGCGCCGGCCAAATGGGTG-CCGGAATCGCCCAACTCGCCGCCGTCAACGGCGTCGACGTTTGGCTTTACGATTTGGATTCTGAAGCTCTTACTAAAGCTCAAAAATCTATTTCCAATAATATTCAACGCCTCCTCACCAAAGGACAAATCTCTCAGGTATTATTACTCCTTTCGTTTGAGCTGAAAGCTTTTGTAAATTGCTTGCTTTGAATTTTACGTTTTTTAATAAGATTTTGCTTGCTTTGAATTTTACGTTTTGGAGTTCTGGAATATAAAGTCAGAATTGATTCATCACAAATGTTTGAAAAATTCTTGTGAAAAAAGCTGGTTTGATTCTCAAAGTTGTACTACTTACTCTATGAAGGTGTTGTTTAGGGTTAATTTGGGAGTTATTTATAAGAAATGTGAACTGTGTTGAGTTCATGTGTTTGATGATCTCATTGATGAAACAGGCAACGAGTGTTGATGCTGTGAAGCGTCTTCGTTGTTCTTCGCGCTTGGATGATTTACAGTCAGTTGATATTGTTGTTGAGGCTATTGTGGAGTCTGAACAAGTGAAGAAATCTTTATTTGCTAACTTGGATAAGATTGTAAAGAGTTCTGCTATTTTGGCTTCTAATACAAGCTCTATTTCCATTACTCGTCTAGCATCTGCAACGAGCCGACCCTCTCAGGTTTGCTTTTCTTGGCTGTTGATTGATTGTAGACTGAAAGATGTTATATGGAACTTATTGAAAACAGAATAACTTTGTTCGTATGCAAATATGTGTGTTGAAGTTCAGGAAAATGCCAACATTCAAACAATTGCATAACTTTCTTGCTCACTTCCTTTTTTGAATCATTCAGAAGGAAGATGTGTGAAATTCATCTATATCATGTTGTCTGTCCTTTCAGACTTGTGGAATCTCAATGCCTAGGCACTCTTGCCCGAGCTGGTAGAATTTCTTGTGGTTGTATTATGGTTGCACTAGTGTGTATGTCCCATCTTTAGTAGTCATCATCACCTGTAAAAACACACATTGATTAACTTTATGATGAGATTGTCTGTATTTCTCAGGAACAACATATAGAATATTATAGTATTGGTAAGGTGAGGGAATTATCTTTCGTCGGGTCAATGAAGTGGTTGGTAAGATTGAAGGTGTAAGGCATCTCACTGCTAATCAGAAGACAAGGGACTAAAAGAACTTCTAAATGGCTGCTAAAAAGCAATACTGGAATGTCGTTGTTATGAATAACTGATAGGGAACCCCATATCTCAAAGTGATGATTTGAAGGAGGATTGATTTGCTCATAAAGAAGTTACGAGTTTAAGTCAGAGATAGAACAGACTTATGCTTGCTGCTTTTTCTTGTATATTATGTAGAATGCACTGTTCAATTCATTTTGATAGTCTTTTGGTTCCTGAAAAAACACCGGTAATGGAGTATTGTGCTCATTTCAGGCCAAAAAAGTCTTTTCTTCTTTCTTTGTGTGTGTATATGAAGTGTCTTGTATATGTTTATTTTGTTTTCTTGAAGTTATACTCATTTATTATATTTTTGGTACTTATTAAGGAACAGCAAATGATCAGCGCAAGCTGACAATGAATCAGGCACTTGTAGTCATTTCCCTCCCCAGAGTCTCCATTCATTGCTCATATATCTTCTCTTCCTTTTTTGTGTATGTTATGTCTTCATGGGCAGGTGATCGGCATGCACTTTATGAATCCTCCGCCGATTATGAAGCTGGTTGAAATTATTCGGGGTGCAGATACATCAGAAGACACATATTGTGCCACTAAATGCCTGGCAGAGAGGTGACTGATAAGAAAACCCTGCAACTAGTATTTACCTTTATATGCACGTCTCGTCAACACTTCCTTTTTTAAAAAAAATTCTGCCTTGAATATTTACGCTTTCAGATACGACAGTCATTTATAATCTACATGTCTTATGGATATAACATTTCCCAAAGCTTCACCAACCCCAAACACAATCTCTCATCCTAGCTGCAAAGGCTCATTATGTATCCCTGTTTAATGTTTGTTAATAGATGCAACCGAACAATGAGAAAGTGGTCTTCATTATGTCCCTGTCTCAAGATGTGAGATTGTTTGTTATCTATAATATGTCTACATAAACGTTTTTTCTTTTAAGCTTCATAAGCAACATGGACAAAGCTTATACAGTATCTCTTATTTCCGATATATGAAATGAATTAAAATACAGGTAAAAGAATAGTTTCTTACCCTCTGTAACTAATTTCTGATTTATCTATTATTTGCAGGTTTGGTAAGACAGTTATCTGCTCTCAGGATTACTCTGGTTTCATAGTAAACCGAATTTTGATGCCAATGATAAACGAAGCCTTTCATACACTGTACACCGGA-GTTGCAACAAAAGAAGATATCGATACAGGAATGAAACT</genome_strand>
        <mrna_strand>ATGGCCGATATCACAAGAATGGGAGTTGTTGGCGCCGGCCAAATGGGCGCCCGGAATTGCTCAACTCGCCGCCGTCAACGGCGTCGACGTTTTGCTTTACGATTTGGATTCTGAAGCTCTTACTAAAGCCCAAAAATCTATTTCCAATAATATTCAACGTCTCCTCACCAAAGGGCAAATCTCTCAG........................................................................................................................................................................................................................................................................................................GCAACGAGTGTGGATGCTGTGAAGCGTCTTCGTTGTTCATCGCGCTTGGAAGATTTACATTCAGTTGATATTGTTGTTGAGGCTATTGTGGAATCTGAACAAGTGAAGAAATCTTTATTTGCTAACTTGGATAAGATTGTAAAGAGTTCTGCTATTTTGGCTTCTAATACAAGCTCTATTTCCATTACTCGTCTAGCATCTGCTACGAGCCGACCTTCCCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTGGCATGCACTTTATGAATCCTCCACCGATTATGAAGCTGGTTGAAATTATCCGTGGTGCAGATACATCAGAAGACACATATTGTGCCACTAAATGCCTGGCAGAGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGTAAAACAGTTATCTGCTCTCAGGATTACTCTGGCTTCATAGTAAACCGAATTTTGATGCCAATGATAAACGAAGCTTTTCATACACTGTACACCGGNTGTTGCAACAAAAGAAGACATTGATACCGGAATGAAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E253428" ref_strand="+" ref_description="SGN-E253428 [cLEG-24-L21]">
      <seq>gccggccaaatgggtgccggaatcgcccaactcgccgccgtcaacggcgtcgacgtttggctttacgatttggattctgaagctcttactaaagctcaaaaatctatttccaataatattcaacgcctcctcaccaaaggacaaatctctcaggcaacgagtgttgatgctgtgaagcgtcttcgttgttcttcgcgcttggatgatttacagtcagttgatattgttgttgaggctattgtggagtctgaacaagtgaagaaatctttatttgctaacttggataagattgtaaagagttctgctattttggcttctaatacaagctctatttccattactcgtctagcatctgcaacgagccgaccctctcaggtgatcggcatgcactttatgaatcctccgccgattatgaagctggttgaaattattcggggtgcagatacatcagaagacacatattgcgccactaaatgcctggcagagaggtttggtaagacagttatctgctctcaagattactctggtttcatagtaaaccgaattttgatgccaatgataaacgaagcctttcatacactgtacaccggagttgcaacaaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="82017" stop="79037"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81717" g_stop="81565" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="153" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81564" i_stop="81269" i_length="296">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81268" g_stop="81047" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="154" r_stop="375" r_length="222" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81046" i_stop="80036" i_length="1011">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80035" g_stop="79923" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="376" r_stop="488" r_length="113" r_score="0.991"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="79922" i_stop="79453" i_length="470">
            <donor d_prob="0.857" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="79452" g_stop="79337" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="489" r_stop="604" r_length="116" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E253428" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>604</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E253428" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81717" e_stop="81565"/>
          <exon e_start="81268" e_stop="81047"/>
          <exon e_start="80035" e_stop="79923"/>
          <exon e_start="79452" e_stop="79337"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCGGCCAAATGGGTGCCGGAATCGCCCAACTCGCCGCCGTCAACGGCGTCGACGTTTGGCTTTACGATTTGGATTCTGAAGCTCTTACTAAAGCTCAAAAATCTATTTCCAATAATATTCAACGCCTCCTCACCAAAGGACAAATCTCTCAGGTATTATTACTCCTTTCGTTTGAGCTGAAAGCTTTTGTAAATTGCTTGCTTTGAATTTTACGTTTTTTAATAAGATTTTGCTTGCTTTGAATTTTACGTTTTGGAGTTCTGGAATATAAAGTCAGAATTGATTCATCACAAATGTTTGAAAAATTCTTGTGAAAAAAGCTGGTTTGATTCTCAAAGTTGTACTACTTACTCTATGAAGGTGTTGTTTAGGGTTAATTTGGGAGTTATTTATAAGAAATGTGAACTGTGTTGAGTTCATGTGTTTGATGATCTCATTGATGAAACAGGCAACGAGTGTTGATGCTGTGAAGCGTCTTCGTTGTTCTTCGCGCTTGGATGATTTACAGTCAGTTGATATTGTTGTTGAGGCTATTGTGGAGTCTGAACAAGTGAAGAAATCTTTATTTGCTAACTTGGATAAGATTGTAAAGAGTTCTGCTATTTTGGCTTCTAATACAAGCTCTATTTCCATTACTCGTCTAGCATCTGCAACGAGCCGACCCTCTCAGGTTTGCTTTTCTTGGCTGTTGATTGATTGTAGACTGAAAGATGTTATATGGAACTTATTGAAAACAGAATAACTTTGTTCGTATGCAAATATGTGTGTTGAAGTTCAGGAAAATGCCAACATTCAAACAATTGCATAACTTTCTTGCTCACTTCCTTTTTTGAATCATTCAGAAGGAAGATGTGTGAAATTCATCTATATCATGTTGTCTGTCCTTTCAGACTTGTGGAATCTCAATGCCTAGGCACTCTTGCCCGAGCTGGTAGAATTTCTTGTGGTTGTATTATGGTTGCACTAGTGTGTATGTCCCATCTTTAGTAGTCATCATCACCTGTAAAAACACACATTGATTAACTTTATGATGAGATTGTCTGTATTTCTCAGGAACAACATATAGAATATTATAGTATTGGTAAGGTGAGGGAATTATCTTTCGTCGGGTCAATGAAGTGGTTGGTAAGATTGAAGGTGTAAGGCATCTCACTGCTAATCAGAAGACAAGGGACTAAAAGAACTTCTAAATGGCTGCTAAAAAGCAATACTGGAATGTCGTTGTTATGAATAACTGATAGGGAACCCCATATCTCAAAGTGATGATTTGAAGGAGGATTGATTTGCTCATAAAGAAGTTACGAGTTTAAGTCAGAGATAGAACAGACTTATGCTTGCTGCTTTTTCTTGTATATTATGTAGAATGCACTGTTCAATTCATTTTGATAGTCTTTTGGTTCCTGAAAAAACACCGGTAATGGAGTATTGTGCTCATTTCAGGCCAAAAAAGTCTTTTCTTCTTTCTTTGTGTGTGTATATGAAGTGTCTTGTATATGTTTATTTTGTTTTCTTGAAGTTATACTCATTTATTATATTTTTGGTACTTATTAAGGAACAGCAAATGATCAGCGCAAGCTGACAATGAATCAGGCACTTGTAGTCATTTCCCTCCCCAGAGTCTCCATTCATTGCTCATATATCTTCTCTTCCTTTTTTGTGTATGTTATGTCTTCATGGGCAGGTGATCGGCATGCACTTTATGAATCCTCCGCCGATTATGAAGCTGGTTGAAATTATTCGGGGTGCAGATACATCAGAAGACACATATTGTGCCACTAAATGCCTGGCAGAGAGGTGACTGATAAGAAAACCCTGCAACTAGTATTTACCTTTATATGCACGTCTCGTCAACACTTCCTTTTTTAAAAAAAATTCTGCCTTGAATATTTACGCTTTCAGATACGACAGTCATTTATAATCTACATGTCTTATGGATATAACATTTCCCAAAGCTTCACCAACCCCAAACACAATCTCTCATCCTAGCTGCAAAGGCTCATTATGTATCCCTGTTTAATGTTTGTTAATAGATGCAACCGAACAATGAGAAAGTGGTCTTCATTATGTCCCTGTCTCAAGATGTGAGATTGTTTGTTATCTATAATATGTCTACATAAACGTTTTTTCTTTTAAGCTTCATAAGCAACATGGACAAAGCTTATACAGTATCTCTTATTTCCGATATATGAAATGAATTAAAATACAGGTAAAAGAATAGTTTCTTACCCTCTGTAACTAATTTCTGATTTATCTATTATTTGCAGGTTTGGTAAGACAGTTATCTGCTCTCAGGATTACTCTGGTTTCATAGTAAACCGAATTTTGATGCCAATGATAAACGAAGCCTTTCATACACTGTACACCGGAGTTGCAACAAAAG</genome_strand>
        <mrna_strand>GCCGGCCAAATGGGTGCCGGAATCGCCCAACTCGCCGCCGTCAACGGCGTCGACGTTTGGCTTTACGATTTGGATTCTGAAGCTCTTACTAAAGCTCAAAAATCTATTTCCAATAATATTCAACGCCTCCTCACCAAAGGACAAATCTCTCAG........................................................................................................................................................................................................................................................................................................GCAACGAGTGTTGATGCTGTGAAGCGTCTTCGTTGTTCTTCGCGCTTGGATGATTTACAGTCAGTTGATATTGTTGTTGAGGCTATTGTGGAGTCTGAACAAGTGAAGAAATCTTTATTTGCTAACTTGGATAAGATTGTAAAGAGTTCTGCTATTTTGGCTTCTAATACAAGCTCTATTTCCATTACTCGTCTAGCATCTGCAACGAGCCGACCCTCTCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATCGGCATGCACTTTATGAATCCTCCGCCGATTATGAAGCTGGTTGAAATTATTCGGGGTGCAGATACATCAGAAGACACATATTGCGCCACTAAATGCCTGGCAGAGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGTAAGACAGTTATCTGCTCTCAAGATTACTCTGGTTTCATAGTAAACCGAATTTTGATGCCAATGATAAACGAAGCCTTTCATACACTGTACACCGGAGTTGCAACAAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E560470" ref_strand="+" ref_description="SGN-E560470 [20129]">
      <seq>catctgaataattttttttaggcatggncgatatagcaaggatcggagttgttggcgccggccaaatgggtgccggaattgctcaactcgccgccgtcaacggcgtcgacgtttggctttacgatttggattctgaagcccttactaaagcccaaaaatctatttccaataatattcaacgcctcctcaccaaaggacaaatctctcaggcaacgagtgtggatgctgtgaagcgtcttcgttgttcatcgcgcttggaagatttacattcagttgatattgttgttgaggctattgtggaatctgaacaagtgaagaaaactttatttgctaacttggataagattgtaaagagctctgctattttggcttctaatacaagctctatttccattactcgtctagcatctgcaacgagccgaccttcccaggtgattggcatgcacttcatgaatcctccaccgattatgaagctggttgaaattatccgtggtgcagatacatcagaagacacatattgtgccactaaatgcctggcagagaggtttggtaagacagttatctgctctcaggattactctggcttcatagtaaaccgaattttgatgcctatgataaacgaagcctttcatacactgtaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="82071" stop="79055"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81772" g_stop="81565" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="209" r_length="209" r_score="0.952"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81564" i_stop="81269" i_length="296">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81268" g_stop="81047" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="210" r_stop="431" r_length="222" r_score="0.959"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81046" i_stop="80036" i_length="1011">
            <donor d_prob="0.993" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80035" g_stop="79923" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="544" r_length="113" r_score="0.956"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="79922" i_stop="79453" i_length="470">
            <donor d_prob="0.857" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="79452" g_stop="79355" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="545" r_stop="642" r_length="98" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E560470" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>641</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E560470" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81772" e_stop="81565"/>
          <exon e_start="81268" e_stop="81047"/>
          <exon e_start="80035" e_stop="79923"/>
          <exon e_start="79452" e_stop="79355"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCTGAATAA-ATTTTTTAGGCATGGCCGATATAACAAGGATCGGAGTTGTTGGCGCCGGCCAAATGGGTGCCGGAATCGCCCAACTCGCCGCCGTCAACGGCGTCGACGTTTGGCTTTACGATTTGGATTCTGAAGCTCTTACTAAAGCTCAAAAATCTATTTCCAATAATATTCAACGCCTCCTCACCAAAGGACAAATCTCTCAGGTATTATTACTCCTTTCGTTTGAGCTGAAAGCTTTTGTAAATTGCTTGCTTTGAATTTTACGTTTTTTAATAAGATTTTGCTTGCTTTGAATTTTACGTTTTGGAGTTCTGGAATATAAAGTCAGAATTGATTCATCACAAATGTTTGAAAAATTCTTGTGAAAAAAGCTGGTTTGATTCTCAAAGTTGTACTACTTACTCTATGAAGGTGTTGTTTAGGGTTAATTTGGGAGTTATTTATAAGAAATGTGAACTGTGTTGAGTTCATGTGTTTGATGATCTCATTGATGAAACAGGCAACGAGTGTTGATGCTGTGAAGCGTCTTCGTTGTTCTTCGCGCTTGGATGATTTACAGTCAGTTGATATTGTTGTTGAGGCTATTGTGGAGTCTGAACAAGTGAAGAAATCTTTATTTGCTAACTTGGATAAGATTGTAAAGAGTTCTGCTATTTTGGCTTCTAATACAAGCTCTATTTCCATTACTCGTCTAGCATCTGCAACGAGCCGACCCTCTCAGGTTTGCTTTTCTTGGCTGTTGATTGATTGTAGACTGAAAGATGTTATATGGAACTTATTGAAAACAGAATAACTTTGTTCGTATGCAAATATGTGTGTTGAAGTTCAGGAAAATGCCAACATTCAAACAATTGCATAACTTTCTTGCTCACTTCCTTTTTTGAATCATTCAGAAGGAAGATGTGTGAAATTCATCTATATCATGTTGTCTGTCCTTTCAGACTTGTGGAATCTCAATGCCTAGGCACTCTTGCCCGAGCTGGTAGAATTTCTTGTGGTTGTATTATGGTTGCACTAGTGTGTATGTCCCATCTTTAGTAGTCATCATCACCTGTAAAAACACACATTGATTAACTTTATGATGAGATTGTCTGTATTTCTCAGGAACAACATATAGAATATTATAGTATTGGTAAGGTGAGGGAATTATCTTTCGTCGGGTCAATGAAGTGGTTGGTAAGATTGAAGGTGTAAGGCATCTCACTGCTAATCAGAAGACAAGGGACTAAAAGAACTTCTAAATGGCTGCTAAAAAGCAATACTGGAATGTCGTTGTTATGAATAACTGATAGGGAACCCCATATCTCAAAGTGATGATTTGAAGGAGGATTGATTTGCTCATAAAGAAGTTACGAGTTTAAGTCAGAGATAGAACAGACTTATGCTTGCTGCTTTTTCTTGTATATTATGTAGAATGCACTGTTCAATTCATTTTGATAGTCTTTTGGTTCCTGAAAAAACACCGGTAATGGAGTATTGTGCTCATTTCAGGCCAAAAAAGTCTTTTCTTCTTTCTTTGTGTGTGTATATGAAGTGTCTTGTATATGTTTATTTTGTTTTCTTGAAGTTATACTCATTTATTATATTTTTGGTACTTATTAAGGAACAGCAAATGATCAGCGCAAGCTGACAATGAATCAGGCACTTGTAGTCATTTCCCTCCCCAGAGTCTCCATTCATTGCTCATATATCTTCTCTTCCTTTTTTGTGTATGTTATGTCTTCATGGGCAGGTGATCGGCATGCACTTTATGAATCCTCCGCCGATTATGAAGCTGGTTGAAATTATTCGGGGTGCAGATACATCAGAAGACACATATTGTGCCACTAAATGCCTGGCAGAGAGGTGACTGATAAGAAAACCCTGCAACTAGTATTTACCTTTATATGCACGTCTCGTCAACACTTCCTTTTTTAAAAAAAATTCTGCCTTGAATATTTACGCTTTCAGATACGACAGTCATTTATAATCTACATGTCTTATGGATATAACATTTCCCAAAGCTTCACCAACCCCAAACACAATCTCTCATCCTAGCTGCAAAGGCTCATTATGTATCCCTGTTTAATGTTTGTTAATAGATGCAACCGAACAATGAGAAAGTGGTCTTCATTATGTCCCTGTCTCAAGATGTGAGATTGTTTGTTATCTATAATATGTCTACATAAACGTTTTTTCTTTTAAGCTTCATAAGCAACATGGACAAAGCTTATACAGTATCTCTTATTTCCGATATATGAAATGAATTAAAATACAGGTAAAAGAATAGTTTCTTACCCTCTGTAACTAATTTCTGATTTATCTATTATTTGCAGGTTTGGTAAGACAGTTATCTGCTCTCAGGATTACTCTGGTTTCATAGTAAACCGAATTTTGATGCCAATGATAAACGAAGCCTTTCATACACTGTACA</genome_strand>
        <mrna_strand>CATCTGAATAATTTTTTTTAGGCATGGNCGATATAGCAAGGATCGGAGTTGTTGGCGCCGGCCAAATGGGTGCCGGAATTGCTCAACTCGCCGCCGTCAACGGCGTCGACGTTTGGCTTTACGATTTGGATTCTGAAGCCCTTACTAAAGCCCAAAAATCTATTTCCAATAATATTCAACGCCTCCTCACCAAAGGACAAATCTCTCAG........................................................................................................................................................................................................................................................................................................GCAACGAGTGTGGATGCTGTGAAGCGTCTTCGTTGTTCATCGCGCTTGGAAGATTTACATTCAGTTGATATTGTTGTTGAGGCTATTGTGGAATCTGAACAAGTGAAGAAAACTTTATTTGCTAACTTGGATAAGATTGTAAAGAGCTCTGCTATTTTGGCTTCTAATACAAGCTCTATTTCCATTACTCGTCTAGCATCTGCAACGAGCCGACCTTCCCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTGGCATGCACTTCATGAATCCTCCACCGATTATGAAGCTGGTTGAAATTATCCGTGGTGCAGATACATCAGAAGACACATATTGTGCCACTAAATGCCTGGCAGAGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGTAAGACAGTTATCTGCTCTCAGGATTACTCTGGCTTCATAGTAAACCGAATTTTGATGCCTATGATAAACGAAGCCTTTCATACACTGTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E448953" ref_strand="+" ref_description="SGN-E448953 [cSTS-4-P4]">
      <seq>caaggatcggagttgttggcgccggccaaatgggtgccggaattgctcaactcgccgccgtcaacggcgtcgacgtttggctttacgatttggattctgaagctcttactaaagcccaaaaatctatttccaataatattcaacgcctcctcaccaaaggacaaatctctcaggcaacgagtgtggatgctgtgaagcgtcttcgttgttcatcgcgcttggaagatttacattcagttgatattgttgttgaggctattgtggaatctgaacaagtgaagaaaactttatttgctaacttggataagattgtaaagagctctgctattttggcttctaatacaagctctatttccattactcgtctagcatctgcaacgagccgaccttcccaggtgatcggcatgcactttatgaatcctccaccgattatgaagctggttgaaattatccgtggtgcagatacatcagaagacacatattgtgccactaaatgcctggcagagaggtttggtaagacagttatctgctctcaggattactctggcttcatagtaaaccgaattttgatgccaatgantaacgaagcttttcata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="82037" stop="79064"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81737" g_stop="81565" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81564" i_stop="81269" i_length="296">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81268" g_stop="81047" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="395" r_length="222" r_score="0.959"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81046" i_stop="80036" i_length="1011">
            <donor d_prob="0.993" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80035" g_stop="79923" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="396" r_stop="508" r_length="113" r_score="0.973"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="79922" i_stop="79453" i_length="470">
            <donor d_prob="0.857" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="79452" g_stop="79364" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="509" r_stop="597" r_length="89" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E448953" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>597</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E448953" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81737" e_stop="81565"/>
          <exon e_start="81268" e_stop="81047"/>
          <exon e_start="80035" e_stop="79923"/>
          <exon e_start="79452" e_stop="79364"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGGATCGGAGTTGTTGGCGCCGGCCAAATGGGTGCCGGAATCGCCCAACTCGCCGCCGTCAACGGCGTCGACGTTTGGCTTTACGATTTGGATTCTGAAGCTCTTACTAAAGCTCAAAAATCTATTTCCAATAATATTCAACGCCTCCTCACCAAAGGACAAATCTCTCAGGTATTATTACTCCTTTCGTTTGAGCTGAAAGCTTTTGTAAATTGCTTGCTTTGAATTTTACGTTTTTTAATAAGATTTTGCTTGCTTTGAATTTTACGTTTTGGAGTTCTGGAATATAAAGTCAGAATTGATTCATCACAAATGTTTGAAAAATTCTTGTGAAAAAAGCTGGTTTGATTCTCAAAGTTGTACTACTTACTCTATGAAGGTGTTGTTTAGGGTTAATTTGGGAGTTATTTATAAGAAATGTGAACTGTGTTGAGTTCATGTGTTTGATGATCTCATTGATGAAACAGGCAACGAGTGTTGATGCTGTGAAGCGTCTTCGTTGTTCTTCGCGCTTGGATGATTTACAGTCAGTTGATATTGTTGTTGAGGCTATTGTGGAGTCTGAACAAGTGAAGAAATCTTTATTTGCTAACTTGGATAAGATTGTAAAGAGTTCTGCTATTTTGGCTTCTAATACAAGCTCTATTTCCATTACTCGTCTAGCATCTGCAACGAGCCGACCCTCTCAGGTTTGCTTTTCTTGGCTGTTGATTGATTGTAGACTGAAAGATGTTATATGGAACTTATTGAAAACAGAATAACTTTGTTCGTATGCAAATATGTGTGTTGAAGTTCAGGAAAATGCCAACATTCAAACAATTGCATAACTTTCTTGCTCACTTCCTTTTTTGAATCATTCAGAAGGAAGATGTGTGAAATTCATCTATATCATGTTGTCTGTCCTTTCAGACTTGTGGAATCTCAATGCCTAGGCACTCTTGCCCGAGCTGGTAGAATTTCTTGTGGTTGTATTATGGTTGCACTAGTGTGTATGTCCCATCTTTAGTAGTCATCATCACCTGTAAAAACACACATTGATTAACTTTATGATGAGATTGTCTGTATTTCTCAGGAACAACATATAGAATATTATAGTATTGGTAAGGTGAGGGAATTATCTTTCGTCGGGTCAATGAAGTGGTTGGTAAGATTGAAGGTGTAAGGCATCTCACTGCTAATCAGAAGACAAGGGACTAAAAGAACTTCTAAATGGCTGCTAAAAAGCAATACTGGAATGTCGTTGTTATGAATAACTGATAGGGAACCCCATATCTCAAAGTGATGATTTGAAGGAGGATTGATTTGCTCATAAAGAAGTTACGAGTTTAAGTCAGAGATAGAACAGACTTATGCTTGCTGCTTTTTCTTGTATATTATGTAGAATGCACTGTTCAATTCATTTTGATAGTCTTTTGGTTCCTGAAAAAACACCGGTAATGGAGTATTGTGCTCATTTCAGGCCAAAAAAGTCTTTTCTTCTTTCTTTGTGTGTGTATATGAAGTGTCTTGTATATGTTTATTTTGTTTTCTTGAAGTTATACTCATTTATTATATTTTTGGTACTTATTAAGGAACAGCAAATGATCAGCGCAAGCTGACAATGAATCAGGCACTTGTAGTCATTTCCCTCCCCAGAGTCTCCATTCATTGCTCATATATCTTCTCTTCCTTTTTTGTGTATGTTATGTCTTCATGGGCAGGTGATCGGCATGCACTTTATGAATCCTCCGCCGATTATGAAGCTGGTTGAAATTATTCGGGGTGCAGATACATCAGAAGACACATATTGTGCCACTAAATGCCTGGCAGAGAGGTGACTGATAAGAAAACCCTGCAACTAGTATTTACCTTTATATGCACGTCTCGTCAACACTTCCTTTTTTAAAAAAAATTCTGCCTTGAATATTTACGCTTTCAGATACGACAGTCATTTATAATCTACATGTCTTATGGATATAACATTTCCCAAAGCTTCACCAACCCCAAACACAATCTCTCATCCTAGCTGCAAAGGCTCATTATGTATCCCTGTTTAATGTTTGTTAATAGATGCAACCGAACAATGAGAAAGTGGTCTTCATTATGTCCCTGTCTCAAGATGTGAGATTGTTTGTTATCTATAATATGTCTACATAAACGTTTTTTCTTTTAAGCTTCATAAGCAACATGGACAAAGCTTATACAGTATCTCTTATTTCCGATATATGAAATGAATTAAAATACAGGTAAAAGAATAGTTTCTTACCCTCTGTAACTAATTTCTGATTTATCTATTATTTGCAGGTTTGGTAAGACAGTTATCTGCTCTCAGGATTACTCTGGTTTCATAGTAAACCGAATTTTGATGCCAATGATAAACGAAGCCTTTCATA</genome_strand>
        <mrna_strand>CAAGGATCGGAGTTGTTGGCGCCGGCCAAATGGGTGCCGGAATTGCTCAACTCGCCGCCGTCAACGGCGTCGACGTTTGGCTTTACGATTTGGATTCTGAAGCTCTTACTAAAGCCCAAAAATCTATTTCCAATAATATTCAACGCCTCCTCACCAAAGGACAAATCTCTCAG........................................................................................................................................................................................................................................................................................................GCAACGAGTGTGGATGCTGTGAAGCGTCTTCGTTGTTCATCGCGCTTGGAAGATTTACATTCAGTTGATATTGTTGTTGAGGCTATTGTGGAATCTGAACAAGTGAAGAAAACTTTATTTGCTAACTTGGATAAGATTGTAAAGAGCTCTGCTATTTTGGCTTCTAATACAAGCTCTATTTCCATTACTCGTCTAGCATCTGCAACGAGCCGACCTTCCCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATCGGCATGCACTTTATGAATCCTCCACCGATTATGAAGCTGGTTGAAATTATCCGTGGTGCAGATACATCAGAAGACACATATTGTGCCACTAAATGCCTGGCAGAGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGTAAGACAGTTATCTGCTCTCAGGATTACTCTGGCTTCATAGTAAACCGAATTTTGATGCCAATGANTAACGAAGCTTTTCATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E274368" ref_strand="+" ref_description="SGN-E274368 [cLEN-19-C13]">
      <seq>ttaggtagcttttttagtgataatctgaataaattttttaggcatggccgatataacaaggatcggagttgttggcgccggccaaatgggtgcctgaatcgcccaactcgccgccgtcaacggcgtcgacgtttggctttacgatttggattctgaagctcttactaaagctcaaaaatctatttccaataatattcaacgcctcctcaccaaaggacaaatctctcaggcaacgagtgttgatgctgtgaagcgtcttcgttgttcttcgcgcttggatgatttacagtcagttgatattgttgttgaggctattgtggagtctgaacaagtgaacaaatctttatttgctaacttggataagattgcaaagagttctgctattttggcttctaatacaagctctatttccattactcgtctagcatctgcaacgagccgaccctctcaggtgatcggcatgcactttatgaatcctccgccgattatgaagctggttgaaattattcggggtgcagatacatcagaagacacatattgtgccactaaatgcctggcagagaggtttggtaagacagttatctgctctcaggattactctggtttcatagtaaaccgaattttgatgccaatgataaacgaagcctttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="82093" stop="79067"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81793" g_stop="81565" g_length="229"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="229" r_length="229" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81564" i_stop="81269" i_length="296">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81268" g_stop="81047" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="451" r_length="222" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81046" i_stop="80036" i_length="1011">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80035" g_stop="79923" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="452" r_stop="564" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="79922" i_stop="79453" i_length="470">
            <donor d_prob="0.857" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="79452" g_stop="79367" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="565" r_stop="650" r_length="86" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E274368" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>650</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E274368" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81793" e_stop="81565"/>
          <exon e_start="81268" e_stop="81047"/>
          <exon e_start="80035" e_stop="79923"/>
          <exon e_start="79452" e_stop="79367"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGGTAGCTTTTTTAGTGATAATCTGAATAAATTTTTTAGGCATGGCCGATATAACAAGGATCGGAGTTGTTGGCGCCGGCCAAATGGGTGCCGGAATCGCCCAACTCGCCGCCGTCAACGGCGTCGACGTTTGGCTTTACGATTTGGATTCTGAAGCTCTTACTAAAGCTCAAAAATCTATTTCCAATAATATTCAACGCCTCCTCACCAAAGGACAAATCTCTCAGGTATTATTACTCCTTTCGTTTGAGCTGAAAGCTTTTGTAAATTGCTTGCTTTGAATTTTACGTTTTTTAATAAGATTTTGCTTGCTTTGAATTTTACGTTTTGGAGTTCTGGAATATAAAGTCAGAATTGATTCATCACAAATGTTTGAAAAATTCTTGTGAAAAAAGCTGGTTTGATTCTCAAAGTTGTACTACTTACTCTATGAAGGTGTTGTTTAGGGTTAATTTGGGAGTTATTTATAAGAAATGTGAACTGTGTTGAGTTCATGTGTTTGATGATCTCATTGATGAAACAGGCAACGAGTGTTGATGCTGTGAAGCGTCTTCGTTGTTCTTCGCGCTTGGATGATTTACAGTCAGTTGATATTGTTGTTGAGGCTATTGTGGAGTCTGAACAAGTGAAGAAATCTTTATTTGCTAACTTGGATAAGATTGTAAAGAGTTCTGCTATTTTGGCTTCTAATACAAGCTCTATTTCCATTACTCGTCTAGCATCTGCAACGAGCCGACCCTCTCAGGTTTGCTTTTCTTGGCTGTTGATTGATTGTAGACTGAAAGATGTTATATGGAACTTATTGAAAACAGAATAACTTTGTTCGTATGCAAATATGTGTGTTGAAGTTCAGGAAAATGCCAACATTCAAACAATTGCATAACTTTCTTGCTCACTTCCTTTTTTGAATCATTCAGAAGGAAGATGTGTGAAATTCATCTATATCATGTTGTCTGTCCTTTCAGACTTGTGGAATCTCAATGCCTAGGCACTCTTGCCCGAGCTGGTAGAATTTCTTGTGGTTGTATTATGGTTGCACTAGTGTGTATGTCCCATCTTTAGTAGTCATCATCACCTGTAAAAACACACATTGATTAACTTTATGATGAGATTGTCTGTATTTCTCAGGAACAACATATAGAATATTATAGTATTGGTAAGGTGAGGGAATTATCTTTCGTCGGGTCAATGAAGTGGTTGGTAAGATTGAAGGTGTAAGGCATCTCACTGCTAATCAGAAGACAAGGGACTAAAAGAACTTCTAAATGGCTGCTAAAAAGCAATACTGGAATGTCGTTGTTATGAATAACTGATAGGGAACCCCATATCTCAAAGTGATGATTTGAAGGAGGATTGATTTGCTCATAAAGAAGTTACGAGTTTAAGTCAGAGATAGAACAGACTTATGCTTGCTGCTTTTTCTTGTATATTATGTAGAATGCACTGTTCAATTCATTTTGATAGTCTTTTGGTTCCTGAAAAAACACCGGTAATGGAGTATTGTGCTCATTTCAGGCCAAAAAAGTCTTTTCTTCTTTCTTTGTGTGTGTATATGAAGTGTCTTGTATATGTTTATTTTGTTTTCTTGAAGTTATACTCATTTATTATATTTTTGGTACTTATTAAGGAACAGCAAATGATCAGCGCAAGCTGACAATGAATCAGGCACTTGTAGTCATTTCCCTCCCCAGAGTCTCCATTCATTGCTCATATATCTTCTCTTCCTTTTTTGTGTATGTTATGTCTTCATGGGCAGGTGATCGGCATGCACTTTATGAATCCTCCGCCGATTATGAAGCTGGTTGAAATTATTCGGGGTGCAGATACATCAGAAGACACATATTGTGCCACTAAATGCCTGGCAGAGAGGTGACTGATAAGAAAACCCTGCAACTAGTATTTACCTTTATATGCACGTCTCGTCAACACTTCCTTTTTTAAAAAAAATTCTGCCTTGAATATTTACGCTTTCAGATACGACAGTCATTTATAATCTACATGTCTTATGGATATAACATTTCCCAAAGCTTCACCAACCCCAAACACAATCTCTCATCCTAGCTGCAAAGGCTCATTATGTATCCCTGTTTAATGTTTGTTAATAGATGCAACCGAACAATGAGAAAGTGGTCTTCATTATGTCCCTGTCTCAAGATGTGAGATTGTTTGTTATCTATAATATGTCTACATAAACGTTTTTTCTTTTAAGCTTCATAAGCAACATGGACAAAGCTTATACAGTATCTCTTATTTCCGATATATGAAATGAATTAAAATACAGGTAAAAGAATAGTTTCTTACCCTCTGTAACTAATTTCTGATTTATCTATTATTTGCAGGTTTGGTAAGACAGTTATCTGCTCTCAGGATTACTCTGGTTTCATAGTAAACCGAATTTTGATGCCAATGATAAACGAAGCCTTTC</genome_strand>
        <mrna_strand>TTAGGTAGCTTTTTTAGTGATAATCTGAATAAATTTTTTAGGCATGGCCGATATAACAAGGATCGGAGTTGTTGGCGCCGGCCAAATGGGTGCCTGAATCGCCCAACTCGCCGCCGTCAACGGCGTCGACGTTTGGCTTTACGATTTGGATTCTGAAGCTCTTACTAAAGCTCAAAAATCTATTTCCAATAATATTCAACGCCTCCTCACCAAAGGACAAATCTCTCAG........................................................................................................................................................................................................................................................................................................GCAACGAGTGTTGATGCTGTGAAGCGTCTTCGTTGTTCTTCGCGCTTGGATGATTTACAGTCAGTTGATATTGTTGTTGAGGCTATTGTGGAGTCTGAACAAGTGAACAAATCTTTATTTGCTAACTTGGATAAGATTGCAAAGAGTTCTGCTATTTTGGCTTCTAATACAAGCTCTATTTCCATTACTCGTCTAGCATCTGCAACGAGCCGACCCTCTCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATCGGCATGCACTTTATGAATCCTCCGCCGATTATGAAGCTGGTTGAAATTATTCGGGGTGCAGATACATCAGAAGACACATATTGTGCCACTAAATGCCTGGCAGAGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGTAAGACAGTTATCTGCTCTCAGGATTACTCTGGTTTCATAGTAAACCGAATTTTGATGCCAATGATAAACGAAGCCTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E423404" ref_strand="+" ref_description="SGN-E423404 [STM-42-A15]">
      <seq>atggccgatatcacaagaatgggagttgttggcgccggccaaatgggcgccggaattgctcaactcgccgccgtcaacggcgtcgacgttttgctttacgatttggattctgaagctcttactaaagcccaaaaatctatttccaataatattcaacgtctcctcaccaaagggcaaatctctcaggcaacgagtgtggatgctgtgaagcgtcttcgttgttcatcgcgcttggaagatttacattcagttgatattgttgttgaggctattgtggaatctgaacaagtgaagaaatctttatttgctaacttggataagattgtaaagagttctgctattttggcttctaatacaagctctatttccattactcgtctagcatctgctacgagccgaccttcccaggtgattggcatgcactttatgaatcctccaccgattatgaagctggttgaaattatccgtggtgcagatacatcagaagacacatattgtgccactaaatgcctggcagagaggtttggtaaaacagttatctgctctcaggattactctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="82050" stop="79115"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81750" g_stop="81565" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="186" r_length="186" r_score="0.946"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81564" i_stop="81269" i_length="296">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.927" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81268" g_stop="81047" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="408" r_length="222" r_score="0.964"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81046" i_stop="80036" i_length="1011">
            <donor d_prob="0.993" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80035" g_stop="79923" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="409" r_stop="521" r_length="113" r_score="0.965"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="79922" i_stop="79453" i_length="470">
            <donor d_prob="0.857" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="79452" g_stop="79415" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="522" r_stop="559" r_length="38" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E423404" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>559</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E423404" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81750" e_stop="81565"/>
          <exon e_start="81268" e_stop="81047"/>
          <exon e_start="80035" e_stop="79923"/>
          <exon e_start="79452" e_stop="79415"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGCCGATATAACAAGGATCGGAGTTGTTGGCGCCGGCCAAATGGGTGCCGGAATCGCCCAACTCGCCGCCGTCAACGGCGTCGACGTTTGGCTTTACGATTTGGATTCTGAAGCTCTTACTAAAGCTCAAAAATCTATTTCCAATAATATTCAACGCCTCCTCACCAAAGGACAAATCTCTCAGGTATTATTACTCCTTTCGTTTGAGCTGAAAGCTTTTGTAAATTGCTTGCTTTGAATTTTACGTTTTTTAATAAGATTTTGCTTGCTTTGAATTTTACGTTTTGGAGTTCTGGAATATAAAGTCAGAATTGATTCATCACAAATGTTTGAAAAATTCTTGTGAAAAAAGCTGGTTTGATTCTCAAAGTTGTACTACTTACTCTATGAAGGTGTTGTTTAGGGTTAATTTGGGAGTTATTTATAAGAAATGTGAACTGTGTTGAGTTCATGTGTTTGATGATCTCATTGATGAAACAGGCAACGAGTGTTGATGCTGTGAAGCGTCTTCGTTGTTCTTCGCGCTTGGATGATTTACAGTCAGTTGATATTGTTGTTGAGGCTATTGTGGAGTCTGAACAAGTGAAGAAATCTTTATTTGCTAACTTGGATAAGATTGTAAAGAGTTCTGCTATTTTGGCTTCTAATACAAGCTCTATTTCCATTACTCGTCTAGCATCTGCAACGAGCCGACCCTCTCAGGTTTGCTTTTCTTGGCTGTTGATTGATTGTAGACTGAAAGATGTTATATGGAACTTATTGAAAACAGAATAACTTTGTTCGTATGCAAATATGTGTGTTGAAGTTCAGGAAAATGCCAACATTCAAACAATTGCATAACTTTCTTGCTCACTTCCTTTTTTGAATCATTCAGAAGGAAGATGTGTGAAATTCATCTATATCATGTTGTCTGTCCTTTCAGACTTGTGGAATCTCAATGCCTAGGCACTCTTGCCCGAGCTGGTAGAATTTCTTGTGGTTGTATTATGGTTGCACTAGTGTGTATGTCCCATCTTTAGTAGTCATCATCACCTGTAAAAACACACATTGATTAACTTTATGATGAGATTGTCTGTATTTCTCAGGAACAACATATAGAATATTATAGTATTGGTAAGGTGAGGGAATTATCTTTCGTCGGGTCAATGAAGTGGTTGGTAAGATTGAAGGTGTAAGGCATCTCACTGCTAATCAGAAGACAAGGGACTAAAAGAACTTCTAAATGGCTGCTAAAAAGCAATACTGGAATGTCGTTGTTATGAATAACTGATAGGGAACCCCATATCTCAAAGTGATGATTTGAAGGAGGATTGATTTGCTCATAAAGAAGTTACGAGTTTAAGTCAGAGATAGAACAGACTTATGCTTGCTGCTTTTTCTTGTATATTATGTAGAATGCACTGTTCAATTCATTTTGATAGTCTTTTGGTTCCTGAAAAAACACCGGTAATGGAGTATTGTGCTCATTTCAGGCCAAAAAAGTCTTTTCTTCTTTCTTTGTGTGTGTATATGAAGTGTCTTGTATATGTTTATTTTGTTTTCTTGAAGTTATACTCATTTATTATATTTTTGGTACTTATTAAGGAACAGCAAATGATCAGCGCAAGCTGACAATGAATCAGGCACTTGTAGTCATTTCCCTCCCCAGAGTCTCCATTCATTGCTCATATATCTTCTCTTCCTTTTTTGTGTATGTTATGTCTTCATGGGCAGGTGATCGGCATGCACTTTATGAATCCTCCGCCGATTATGAAGCTGGTTGAAATTATTCGGGGTGCAGATACATCAGAAGACACATATTGTGCCACTAAATGCCTGGCAGAGAGGTGACTGATAAGAAAACCCTGCAACTAGTATTTACCTTTATATGCACGTCTCGTCAACACTTCCTTTTTTAAAAAAAATTCTGCCTTGAATATTTACGCTTTCAGATACGACAGTCATTTATAATCTACATGTCTTATGGATATAACATTTCCCAAAGCTTCACCAACCCCAAACACAATCTCTCATCCTAGCTGCAAAGGCTCATTATGTATCCCTGTTTAATGTTTGTTAATAGATGCAACCGAACAATGAGAAAGTGGTCTTCATTATGTCCCTGTCTCAAGATGTGAGATTGTTTGTTATCTATAATATGTCTACATAAACGTTTTTTCTTTTAAGCTTCATAAGCAACATGGACAAAGCTTATACAGTATCTCTTATTTCCGATATATGAAATGAATTAAAATACAGGTAAAAGAATAGTTTCTTACCCTCTGTAACTAATTTCTGATTTATCTATTATTTGCAGGTTTGGTAAGACAGTTATCTGCTCTCAGGATTACTCTG</genome_strand>
        <mrna_strand>ATGGCCGATATCACAAGAATGGGAGTTGTTGGCGCCGGCCAAATGGGCGCCGGAATTGCTCAACTCGCCGCCGTCAACGGCGTCGACGTTTTGCTTTACGATTTGGATTCTGAAGCTCTTACTAAAGCCCAAAAATCTATTTCCAATAATATTCAACGTCTCCTCACCAAAGGGCAAATCTCTCAG........................................................................................................................................................................................................................................................................................................GCAACGAGTGTGGATGCTGTGAAGCGTCTTCGTTGTTCATCGCGCTTGGAAGATTTACATTCAGTTGATATTGTTGTTGAGGCTATTGTGGAATCTGAACAAGTGAAGAAATCTTTATTTGCTAACTTGGATAAGATTGTAAAGAGTTCTGCTATTTTGGCTTCTAATACAAGCTCTATTTCCATTACTCGTCTAGCATCTGCTACGAGCCGACCTTCCCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTGGCATGCACTTTATGAATCCTCCACCGATTATGAAGCTGGTTGAAATTATCCGTGGTGCAGATACATCAGAAGACACATATTGTGCCACTAAATGCCTGGCAGAGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGTAAAACAGTTATCTGCTCTCAGGATTACTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E258237" ref_strand="+" ref_description="SGN-E258237 [cLEG-49-F18]">
      <seq>ctgaataaattttttaggcatggccgatataacaaggatcggagttgttggcgccggccaaatgggtgccggaatcgcccaactcgccgccgtcaacggcgtcgacgtttggctttacgatttggattctgaagctcttactaaagctcaaaaatctatttccaataatattcaacgcctcctcaccaaaggacaaatctctcaggcaacgagtgttgatgctgtgaagcgtcttcgttgttcttcgcgcttggatgatttacagtcagttgatattgttgttgaggctattgtggagtctgaacaagtgaagaaatctttatttgctaacttggataagattgtaaagagttctgctattttggcttctaatacaagctctatttccattactcgtctagcatctgcaacgagccgaccctctcaggtgatcggcatgcactttatgaatcctccgccgattatgaagctggttgaaattattcggggtgcagatacatcagaagacacatattgtgccactaaatgcctggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="82069" stop="79629"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81769" g_stop="81565" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="205" r_length="205" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81564" i_stop="81269" i_length="296">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81268" g_stop="81047" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="427" r_length="222" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81046" i_stop="80036" i_length="1011">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80035" g_stop="79929" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="428" r_stop="534" r_length="107" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E258237" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>534</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E258237" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81769" e_stop="81565"/>
          <exon e_start="81268" e_stop="81047"/>
          <exon e_start="80035" e_stop="79929"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGAATAAATTTTTTAGGCATGGCCGATATAACAAGGATCGGAGTTGTTGGCGCCGGCCAAATGGGTGCCGGAATCGCCCAACTCGCCGCCGTCAACGGCGTCGACGTTTGGCTTTACGATTTGGATTCTGAAGCTCTTACTAAAGCTCAAAAATCTATTTCCAATAATATTCAACGCCTCCTCACCAAAGGACAAATCTCTCAGGTATTATTACTCCTTTCGTTTGAGCTGAAAGCTTTTGTAAATTGCTTGCTTTGAATTTTACGTTTTTTAATAAGATTTTGCTTGCTTTGAATTTTACGTTTTGGAGTTCTGGAATATAAAGTCAGAATTGATTCATCACAAATGTTTGAAAAATTCTTGTGAAAAAAGCTGGTTTGATTCTCAAAGTTGTACTACTTACTCTATGAAGGTGTTGTTTAGGGTTAATTTGGGAGTTATTTATAAGAAATGTGAACTGTGTTGAGTTCATGTGTTTGATGATCTCATTGATGAAACAGGCAACGAGTGTTGATGCTGTGAAGCGTCTTCGTTGTTCTTCGCGCTTGGATGATTTACAGTCAGTTGATATTGTTGTTGAGGCTATTGTGGAGTCTGAACAAGTGAAGAAATCTTTATTTGCTAACTTGGATAAGATTGTAAAGAGTTCTGCTATTTTGGCTTCTAATACAAGCTCTATTTCCATTACTCGTCTAGCATCTGCAACGAGCCGACCCTCTCAGGTTTGCTTTTCTTGGCTGTTGATTGATTGTAGACTGAAAGATGTTATATGGAACTTATTGAAAACAGAATAACTTTGTTCGTATGCAAATATGTGTGTTGAAGTTCAGGAAAATGCCAACATTCAAACAATTGCATAACTTTCTTGCTCACTTCCTTTTTTGAATCATTCAGAAGGAAGATGTGTGAAATTCATCTATATCATGTTGTCTGTCCTTTCAGACTTGTGGAATCTCAATGCCTAGGCACTCTTGCCCGAGCTGGTAGAATTTCTTGTGGTTGTATTATGGTTGCACTAGTGTGTATGTCCCATCTTTAGTAGTCATCATCACCTGTAAAAACACACATTGATTAACTTTATGATGAGATTGTCTGTATTTCTCAGGAACAACATATAGAATATTATAGTATTGGTAAGGTGAGGGAATTATCTTTCGTCGGGTCAATGAAGTGGTTGGTAAGATTGAAGGTGTAAGGCATCTCACTGCTAATCAGAAGACAAGGGACTAAAAGAACTTCTAAATGGCTGCTAAAAAGCAATACTGGAATGTCGTTGTTATGAATAACTGATAGGGAACCCCATATCTCAAAGTGATGATTTGAAGGAGGATTGATTTGCTCATAAAGAAGTTACGAGTTTAAGTCAGAGATAGAACAGACTTATGCTTGCTGCTTTTTCTTGTATATTATGTAGAATGCACTGTTCAATTCATTTTGATAGTCTTTTGGTTCCTGAAAAAACACCGGTAATGGAGTATTGTGCTCATTTCAGGCCAAAAAAGTCTTTTCTTCTTTCTTTGTGTGTGTATATGAAGTGTCTTGTATATGTTTATTTTGTTTTCTTGAAGTTATACTCATTTATTATATTTTTGGTACTTATTAAGGAACAGCAAATGATCAGCGCAAGCTGACAATGAATCAGGCACTTGTAGTCATTTCCCTCCCCAGAGTCTCCATTCATTGCTCATATATCTTCTCTTCCTTTTTTGTGTATGTTATGTCTTCATGGGCAGGTGATCGGCATGCACTTTATGAATCCTCCGCCGATTATGAAGCTGGTTGAAATTATTCGGGGTGCAGATACATCAGAAGACACATATTGTGCCACTAAATGCCTGGC</genome_strand>
        <mrna_strand>CTGAATAAATTTTTTAGGCATGGCCGATATAACAAGGATCGGAGTTGTTGGCGCCGGCCAAATGGGTGCCGGAATCGCCCAACTCGCCGCCGTCAACGGCGTCGACGTTTGGCTTTACGATTTGGATTCTGAAGCTCTTACTAAAGCTCAAAAATCTATTTCCAATAATATTCAACGCCTCCTCACCAAAGGACAAATCTCTCAG........................................................................................................................................................................................................................................................................................................GCAACGAGTGTTGATGCTGTGAAGCGTCTTCGTTGTTCTTCGCGCTTGGATGATTTACAGTCAGTTGATATTGTTGTTGAGGCTATTGTGGAGTCTGAACAAGTGAAGAAATCTTTATTTGCTAACTTGGATAAGATTGTAAAGAGTTCTGCTATTTTGGCTTCTAATACAAGCTCTATTTCCATTACTCGTCTAGCATCTGCAACGAGCCGACCCTCTCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATCGGCATGCACTTTATGAATCCTCCGCCGATTATGAAGCTGGTTGAAATTATTCGGGGTGCAGATACATCAGAAGACACATATTGTGCCACTAAATGCCTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E243289" ref_strand="+" ref_description="SGN-E243289 [cLEF-12-B3]">
      <seq>cggaatcgcccaactcgccgccgtcaacggcgtcgacgtttggctttacgatttggattctgaagctcttactaaagctcaaaaatctatttccaataatattcaacgcctcctcaccaaaggacaaatctctcaggcaacgagtgttgatgctgtgaagcgtcttcgttgttcttcgcgcttggatgatttacagtcagttgatattgttgttgaggctattgtggagtctgaacaagtgaagaaatctttatttgctaacttggataagattgtaaagagttctgctattttggcttctaatacaagctctatttccattactcgtctagcatctgcaacgagccgaccctctcaggtgatcggcatgcactttatgaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="-" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="82000" stop="79712"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81700" g_stop="81565" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="136" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81564" i_stop="81269" i_length="296">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81268" g_stop="81047" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="137" r_stop="358" r_length="222" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81046" i_stop="80036" i_length="1011">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80035" g_stop="80012" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="359" r_stop="382" r_length="24" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="-" ref_id="SGN-E243289" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>382</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E243289" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81700" e_stop="81565"/>
          <exon e_start="81268" e_stop="81047"/>
          <exon e_start="80035" e_stop="80012"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGAATCGCCCAACTCGCCGCCGTCAACGGCGTCGACGTTTGGCTTTACGATTTGGATTCTGAAGCTCTTACTAAAGCTCAAAAATCTATTTCCAATAATATTCAACGCCTCCTCACCAAAGGACAAATCTCTCAGGTATTATTACTCCTTTCGTTTGAGCTGAAAGCTTTTGTAAATTGCTTGCTTTGAATTTTACGTTTTTTAATAAGATTTTGCTTGCTTTGAATTTTACGTTTTGGAGTTCTGGAATATAAAGTCAGAATTGATTCATCACAAATGTTTGAAAAATTCTTGTGAAAAAAGCTGGTTTGATTCTCAAAGTTGTACTACTTACTCTATGAAGGTGTTGTTTAGGGTTAATTTGGGAGTTATTTATAAGAAATGTGAACTGTGTTGAGTTCATGTGTTTGATGATCTCATTGATGAAACAGGCAACGAGTGTTGATGCTGTGAAGCGTCTTCGTTGTTCTTCGCGCTTGGATGATTTACAGTCAGTTGATATTGTTGTTGAGGCTATTGTGGAGTCTGAACAAGTGAAGAAATCTTTATTTGCTAACTTGGATAAGATTGTAAAGAGTTCTGCTATTTTGGCTTCTAATACAAGCTCTATTTCCATTACTCGTCTAGCATCTGCAACGAGCCGACCCTCTCAGGTTTGCTTTTCTTGGCTGTTGATTGATTGTAGACTGAAAGATGTTATATGGAACTTATTGAAAACAGAATAACTTTGTTCGTATGCAAATATGTGTGTTGAAGTTCAGGAAAATGCCAACATTCAAACAATTGCATAACTTTCTTGCTCACTTCCTTTTTTGAATCATTCAGAAGGAAGATGTGTGAAATTCATCTATATCATGTTGTCTGTCCTTTCAGACTTGTGGAATCTCAATGCCTAGGCACTCTTGCCCGAGCTGGTAGAATTTCTTGTGGTTGTATTATGGTTGCACTAGTGTGTATGTCCCATCTTTAGTAGTCATCATCACCTGTAAAAACACACATTGATTAACTTTATGATGAGATTGTCTGTATTTCTCAGGAACAACATATAGAATATTATAGTATTGGTAAGGTGAGGGAATTATCTTTCGTCGGGTCAATGAAGTGGTTGGTAAGATTGAAGGTGTAAGGCATCTCACTGCTAATCAGAAGACAAGGGACTAAAAGAACTTCTAAATGGCTGCTAAAAAGCAATACTGGAATGTCGTTGTTATGAATAACTGATAGGGAACCCCATATCTCAAAGTGATGATTTGAAGGAGGATTGATTTGCTCATAAAGAAGTTACGAGTTTAAGTCAGAGATAGAACAGACTTATGCTTGCTGCTTTTTCTTGTATATTATGTAGAATGCACTGTTCAATTCATTTTGATAGTCTTTTGGTTCCTGAAAAAACACCGGTAATGGAGTATTGTGCTCATTTCAGGCCAAAAAAGTCTTTTCTTCTTTCTTTGTGTGTGTATATGAAGTGTCTTGTATATGTTTATTTTGTTTTCTTGAAGTTATACTCATTTATTATATTTTTGGTACTTATTAAGGAACAGCAAATGATCAGCGCAAGCTGACAATGAATCAGGCACTTGTAGTCATTTCCCTCCCCAGAGTCTCCATTCATTGCTCATATATCTTCTCTTCCTTTTTTGTGTATGTTATGTCTTCATGGGCAGGTGATCGGCATGCACTTTATGAAT</genome_strand>
        <mrna_strand>CGGAATCGCCCAACTCGCCGCCGTCAACGGCGTCGACGTTTGGCTTTACGATTTGGATTCTGAAGCTCTTACTAAAGCTCAAAAATCTATTTCCAATAATATTCAACGCCTCCTCACCAAAGGACAAATCTCTCAG........................................................................................................................................................................................................................................................................................................GCAACGAGTGTTGATGCTGTGAAGCGTCTTCGTTGTTCTTCGCGCTTGGATGATTTACAGTCAGTTGATATTGTTGTTGAGGCTATTGTGGAGTCTGAACAAGTGAAGAAATCTTTATTTGCTAACTTGGATAAGATTGTAAAGAGTTCTGCTATTTTGGCTTCTAATACAAGCTCTATTTCCATTACTCGTCTAGCATCTGCAACGAGCCGACCCTCTCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATCGGCATGCACTTTATGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E213478" ref_strand="+" ref_description="SGN-E213478 [cLEC-71-D16]">
      <seq>caattcctgagaactatgcaaacctttcatcgcttgtgttcctctcgttgtccaataattccctttcaaatttgtctggagctttatctgttctgcagcactgcagaaatctttcaactcttattctcaccaggaacttccgtggtgaagagattccgaaaaatgtgagtggatttgagaacctgatgatatttgcattggggaactgtggtctggatgggcgaattccgatatggttatacaattgcagtaaattgcaagtgcttgacctgtcatggaatcatttggatggcgaaattcctacttggattggtgaaatggaaaaattgttctacttggatttctcgaataattcactcacaggtgaaatcccaaaaaatttaactgatcttaagagtctcatttccccacacaactatgcatctagtctgaattctcccactggtataccgttgtttgtcaagaggaatcaaagcggtagtggtttgcagtacaatcaagcttcaagcttccctccgtctatcttattgagtaataacagactatacgggacaatctggcccgaaattggtcggctgaaacaacttcatgtcttggatctcagtaagacaacattacggggactattcctagctcgatttcaatatggtgaacctgnaaagtttggatctttcatgtaatgatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0046G04-M8CNF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0046G04.1" temp_strand="+" temp_description="C07HBa0046G04.1  AC210353.2 htgs_phase:2 submitted_to_sgn_as:C07HBa0046G04 upload_account_name:france">
        <position start="91601" stop="92887"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91901" g_stop="92587" g_length="687"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="685" r_length="685" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0046G04.1" gen_strand="+" ref_id="SGN-E213478" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>687</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0046G04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E213478" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91901" e_stop="92587"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATTCCTGAGAACTATGCAAACCTTTCATCGCTTGTGTTCCTCTCGTTGTCCAATAATTCCCTTTCAAATTTGTCTGGAGCTTTATCTGTTCTGCAGCACTGCAGAAATCTTTCAACTCTTATTCTCACCAGGAACTTCCGTGGTGAAGAGATTCCGAAAAATGTGAGTGGATTTGAGAACCTGATGATATTTGCATTGGGGAACTGTGGTCTGGATGGGCGAATTCCGATATGGTTATACAATTGCAGTAAATTGCAAGTGCTTGACCTGTCATGGAATCATTTGGATGGCGAAATTCCTACTTGGATTGGTGAAATGGAAAAATTGTTCTACTTGGATTTCTCGAATAATTCACTCACAGGTGAAATCCCAAAAAATTTAACTGATCTTAAGAGTCTCATTTCCCCACACAACTATGCATCTAGTCTGAATTCTCCCACTGGTATACCGTTGTTTGTCAAGAGGAATCAAAGCGGTAGTGGTTTGCAGTACAATCAGGCTTCAAGCTTCCCTCCGTCTATCTTATTGAGTAATAACAGACTAAACGGGACAATCTGGCCCGAAATTGGTCGGCTGAAACAACTTCATGTCTTGGATCTCAGTAAGAACAACATTACGGGGACTATTCCTAGCTCGATTTCAAATATGGGGAACCTGGAAGTTTTGGATCTTTCATGTAATGATC</genome_strand>
        <mrna_strand>CAATTCCTGAGAACTATGCAAACCTTTCATCGCTTGTGTTCCTCTCGTTGTCCAATAATTCCCTTTCAAATTTGTCTGGAGCTTTATCTGTTCTGCAGCACTGCAGAAATCTTTCAACTCTTATTCTCACCAGGAACTTCCGTGGTGAAGAGATTCCGAAAAATGTGAGTGGATTTGAGAACCTGATGATATTTGCATTGGGGAACTGTGGTCTGGATGGGCGAATTCCGATATGGTTATACAATTGCAGTAAATTGCAAGTGCTTGACCTGTCATGGAATCATTTGGATGGCGAAATTCCTACTTGGATTGGTGAAATGGAAAAATTGTTCTACTTGGATTTCTCGAATAATTCACTCACAGGTGAAATCCCAAAAAATTTAACTGATCTTAAGAGTCTCATTTCCCCACACAACTATGCATCTAGTCTGAATTCTCCCACTGGTATACCGTTGTTTGTCAAGAGGAATCAAAGCGGTAGTGGTTTGCAGTACAATCAAGCTTCAAGCTTCCCTCCGTCTATCTTATTGAGTAATAACAGACTATACGGGACAATCTGGCCCGAAATTGGTCGGCTGAAACAACTTCATGTCTTGGATCTCAGTAAG-ACAACATTACGGGGACTATTCCTAGCTCGATTTC-AATATGGTGAACCTGNAAAGTTTGGATCTTTCATGTAATGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>242</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="3011" PGL_stop="4470"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="3011" e_stop="3485"/>
            <exon e_start="3573" e_stop="4082"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.991" acc_prob="0.989" e_score="1.000"/>
          <exon-only e_score="0.978"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="3011" e_stop="3485" e_length="475"/>
          </exon>
          <intron i_serial="1" don_prob="0.991" acc_prob="0.989">
            <gDNA_intron_boundary i_start="3486" i_stop="3572" i_length="87"/>
          </intron>
          <exon e_serial="2" e_score="0.978">
            <gDNA_exon_boundary e_start="3573" e_stop="4082" e_length="510"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3011" stop="3485"/>
              <exon start="3573" stop="3882"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E537494" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3012" stop="3485"/>
              <exon start="3573" stop="3630"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266314" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3300" stop="3485"/>
              <exon start="3573" stop="4082"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351817" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAAAGACAAGGTCAATCCAATCCAAAAAGCAGAAGTGAGATGTTCAACTCTCATCCAGAAGAAGTTGCCTCTGGTTTTCCAATTGACCCTCCTAGACCATCTCAAGTCGTCGAAGAAGCAAGTAATGATCCCCACGTGCAGCTTCATAAGCGAGGTTCCCATTCCGGGCCATTGTCTCACCGAGCTGCTTGGGCAAAAGCTGGAAAGAATATGGATGATGCCCCAAAGCTTTCTGTAGCGGACATGTCAGCTATGTCTGGGCTAGTCGCTGCAAGGAGAAGCATGTTCTCTGAAGACCGTCCAGATAAGTCAGGTTCACACAAACAGGAGGTTCCTAAACTCATAGCCAGGTTTCCCGGATCCTATAAAGAGGCTTCACATTCCACAATGAAACAAGAACAGAAAAATCATGCACTTGCTAGCTCACATCATCAAAACGAGGACGGTAGAACCAGCAACAACGATCCCGTTCTT : TTGGGATATGGATCAAAAGGCAACAAAATCCACTACTCTGGACCACTACTAGTTCCATCAGGCAAAATGGATCAAGTGTTGAAAGATCACGATCGCCACATCCAAGAAGCTGTAAGACGAGCACGCTTGGACAAGGCGAAAGCAAAGAAAATTCAGGTTGAAGGCAACAAATTATCAGCCAATTCATTATTTGTTTCTGGCCGTTGAGCTTCAACTGAGAGCGAATCGGCTAAGAACAACTAAAAGAGAATCCAGACTATAGAAAAATCACTAGTTAGTTAGTATTATCATGTAAAATGAGTCAAATTTGAGAAGGGTGAGTTGAGGGAGTTTGTATAGAAGTTGTTTAAGGAAGGATAGCGCGGGGCGTTTTTTTCGCCATTTGTAGAAGAATTTATCTGGAAAAGATCTCCCTTGTTTTCTGCTAATTTAAACAATGTAACTCTCTCTAAACATTGAATCATTCTTGCTGTTCAGGTAACTGTCTTCAGTCTCTGTGCAAGAATGATA</gDNA_template>
            <first_frame> E  K  T  R  S  I  Q  S  K  K  Q  K  *  D  V  Q  L  S  S  R  R  S  C  L  W  F  S  N  *  P  S  *  T  I  S  S  R  R  R  S  K  *  *  S  P  R  A  A  S  *  A  R  F  P  F  R  A  I  V  S  P  S  C  L  G  K  S  W  K  E  Y  G  *  C  P  K  A  F  C  S  G  H  V  S  Y  V  W  A  S  R  C  K  E  K  H  V  L  *  R  P  S  R  *  V  R  F  T  Q  T  G  G  S  *  T  H  S  Q  V  S  R  I  L  *  R  G  F  T  F  H  N  E  T  R  T  E  K  S  C  T  C  *  L  T  S  S  K  R  G  R  *  N  Q  Q  Q  R  S  R  S   : F  G  I  W  I  K  R  Q  Q  N  P  L  L  W  T  T  T  S  S  I  R  Q  N  G  S  S  V  E  R  S  R  S  P  H  P  R  S  C  K  T  S  T  L  G  Q  G  E  S  K  E  N  S  G  *  R  Q  Q  I  I  S  Q  F  I  I  C  F  W  P  L  S  F  N  *  E  R  I  G  *  E  Q  L  K  E  N  P  D  Y  R  K  I  T  S  *  L  V  L  S  C  K  M  S  Q  I  *  E  G  *  V  E  G  V  C  I  E  V  V  *  G  R  I  A  R  G  V  F  F  A  I  C  R  R  I  Y  L  E  K  I  S  L  V  F  C  *  F  K  Q  C  N  S  L  *  T  L  N  H  S  C  C  S  G  N  C  L  Q  S  L  C  K  N  D  </first_frame>
            <second_frame>  K  R  Q  G  Q  S  N  P  K  S  R  S  E  M  F  N  S  H  P  E  E  V  A  S  G  F  P  I  D  P  P  R  P  S  Q  V  V  E  E  A  S  N  D  P  H  V  Q  L  H  K  R  G  S  H  S  G  P  L  S  H  R  A  A  W  A  K  A  G  K  N  M  D  D  A  P  K  L  S  V  A  D  M  S  A  M  S  G  L  V  A  A  R  R  S  M  F  S  E  D  R  P  D  K  S  G  S  H  K  Q  E  V  P  K  L  I  A  R  F  P  G  S  Y  K  E  A  S  H  S  T  M  K  Q  E  Q  K  N  H  A  L  A  S  S  H  H  Q  N  E  D  G  R  T  S  N  N  D  P  V  L  :  L  G  Y  G  S  K  G  N  K  I  H  Y  S  G  P  L  L  V  P  S  G  K  M  D  Q  V  L  K  D  H  D  R  H  I  Q  E  A  V  R  R  A  R  L  D  K  A  K  A  K  K  I  Q  V  E  G  N  K  L  S  A  N  S  L  F  V  S  G  R  *  A  S  T  E  S  E  S  A  K  N  N  *  K  R  I  Q  T  I  E  K  S  L  V  S  *  Y  Y  H  V  K  *  V  K  F  E  K  G  E  L  R  E  F  V  *  K  L  F  K  E  G  *  R  G  A  F  F  S  P  F  V  E  E  F  I  W  K  R  S  P  L  F  S  A  N  L  N  N  V  T  L  S  K  H  *  I  I  L  A  V  Q  V  T  V  F  S  L  C  A  R  M  I </second_frame>
            <third_frame>   K  D  K  V  N  P  I  Q  K  A  E  V  R  C  S  T  L  I  Q  K  K  L  P  L  V  F  Q  L  T  L  L  D  H  L  K  S  S  K  K  Q  V  M  I  P  T  C  S  F  I  S  E  V  P  I  P  G  H  C  L  T  E  L  L  G  Q  K  L  E  R  I  W  M  M  P  Q  S  F  L  *  R  T  C  Q  L  C  L  G  *  S  L  Q  G  E  A  C  S  L  K  T  V  Q  I  S  Q  V  H  T  N  R  R  F  L  N  S  *  P  G  F  P  D  P  I  K  R  L  H  I  P  Q  *  N  K  N  R  K  I  M  H  L  L  A  H  I  I  K  T  R  T  V  E  P  A  T  T  I  P  F  F :   W  D  M  D  Q  K  A  T  K  S  T  T  L  D  H  Y  *  F  H  Q  A  K  W  I  K  C  *  K  I  T  I  A  T  S  K  K  L  *  D  E  H  A  W  T  R  R  K  Q  R  K  F  R  L  K  A  T  N  Y  Q  P  I  H  Y  L  F  L  A  V  E  L  Q  L  R  A  N  R  L  R  T  T  K  R  E  S  R  L  *  K  N  H  *  L  V  S  I  I  M  *  N  E  S  N  L  R  R  V  S  *  G  S  L  Y  R  S  C  L  R  K  D  S  A  G  R  F  F  R  H  L  *  K  N  L  S  G  K  D  L  P  C  F  L  L  I  *  T  M  *  L  S  L  N  I  E  S  F  L  L  F  R  *  L  S  S  V  S  V  Q  E  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0046G04.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3012" stop="3485"/>
                    <exon start="3573" stop="3779"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>678</number_coding_nucleotides>
                  <number_encoded_amino_acids>226</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KRQGQSNPKSRSEMFNSHPEEVASGFPIDPPRPSQVVEEASNDPHVQLHKRGSHSGPLSHRAAWAKAGKNMDDAPKLSVADMSAMSGLVAARRSMFSEDRPDKSGSHKQEVPKLIARFPGSYKEASHSTMKQEQKNHALASSHHQNEDGRTSNNDPVLLGYGSKGNKIHYSGPLLVPSGKMDQVLKDHDRHIQEAVRRARLDKAKAKKIQVEGNKLSANSLFVSGR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="3011" e_stop="3485"/>
            <exon e_start="3573" e_stop="4049"/>
            <exon e_start="4265" e_stop="4284"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.991" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.960" acc_prob="0.000" e_score="0.988"/>
          <exon-only e_score="0.650"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="3011" e_stop="3485" e_length="475"/>
          </exon>
          <intron i_serial="1" don_prob="0.991" acc_prob="0.989">
            <gDNA_intron_boundary i_start="3486" i_stop="3572" i_length="87"/>
          </intron>
          <exon e_serial="2" e_score="0.988">
            <gDNA_exon_boundary e_start="3573" e_stop="4049" e_length="477"/>
          </exon>
          <intron i_serial="2" don_prob="0.960" acc_prob="0.000">
            <gDNA_intron_boundary i_start="4050" i_stop="4264" i_length="215"/>
          </intron>
          <exon e_serial="3" e_score="0.650">
            <gDNA_exon_boundary e_start="4265" e_stop="4284" e_length="20"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3011" stop="3485"/>
              <exon start="3573" stop="3882"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E537494" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3012" stop="3485"/>
              <exon start="3573" stop="3630"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266314" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3623" stop="4049"/>
              <exon start="4265" stop="4284"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226582" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAAAGACAAGGTCAATCCAATCCAAAAAGCAGAAGTGAGATGTTCAACTCTCATCCAGAAGAAGTTGCCTCTGGTTTTCCAATTGACCCTCCTAGACCATCTCAAGTCGTCGAAGAAGCAAGTAATGATCCCCACGTGCAGCTTCATAAGCGAGGTTCCCATTCCGGGCCATTGTCTCACCGAGCTGCTTGGGCAAAAGCTGGAAAGAATATGGATGATGCCCCAAAGCTTTCTGTAGCGGACATGTCAGCTATGTCTGGGCTAGTCGCTGCAAGGAGAAGCATGTTCTCTGAAGACCGTCCAGATAAGTCAGGTTCACACAAACAGGAGGTTCCTAAACTCATAGCCAGGTTTCCCGGATCCTATAAAGAGGCTTCACATTCCACAATGAAACAAGAACAGAAAAATCATGCACTTGCTAGCTCACATCATCAAAACGAGGACGGTAGAACCAGCAACAACGATCCCGTTCTT : TTGGGATATGGATCAAAAGGCAACAAAATCCACTACTCTGGACCACTACTAGTTCCATCAGGCAAAATGGATCAAGTGTTGAAAGATCACGATCGCCACATCCAAGAAGCTGTAAGACGAGCACGCTTGGACAAGGCGAAAGCAAAGAAAATTCAGGTTGAAGGCAACAAATTATCAGCCAATTCATTATTTGTTTCTGGCCGTTGAGCTTCAACTGAGAGCGAATCGGCTAAGAACAACTAAAAGAGAATCCAGACTATAGAAAAATCACTAGTTAGTTAGTATTATCATGTAAAATGAGTCAAATTTGAGAAGGGTGAGTTGAGGGAGTTTGTATAGAAGTTGTTTAAGGAAGGATAGCGCGGGGCGTTTTTTTCGCCATTTGTAGAAGAATTTATCTGGAAAAGATCTCCCTTGTTTTCTGCTAATTTAAACAATGTAACTCTCTCTAAACATTGAATCATTCTTGCTGTTCAG : GGTGGAAAAACAAAAAGGAT</gDNA_template>
            <first_frame> E  K  T  R  S  I  Q  S  K  K  Q  K  *  D  V  Q  L  S  S  R  R  S  C  L  W  F  S  N  *  P  S  *  T  I  S  S  R  R  R  S  K  *  *  S  P  R  A  A  S  *  A  R  F  P  F  R  A  I  V  S  P  S  C  L  G  K  S  W  K  E  Y  G  *  C  P  K  A  F  C  S  G  H  V  S  Y  V  W  A  S  R  C  K  E  K  H  V  L  *  R  P  S  R  *  V  R  F  T  Q  T  G  G  S  *  T  H  S  Q  V  S  R  I  L  *  R  G  F  T  F  H  N  E  T  R  T  E  K  S  C  T  C  *  L  T  S  S  K  R  G  R  *  N  Q  Q  Q  R  S  R  S   : F  G  I  W  I  K  R  Q  Q  N  P  L  L  W  T  T  T  S  S  I  R  Q  N  G  S  S  V  E  R  S  R  S  P  H  P  R  S  C  K  T  S  T  L  G  Q  G  E  S  K  E  N  S  G  *  R  Q  Q  I  I  S  Q  F  I  I  C  F  W  P  L  S  F  N  *  E  R  I  G  *  E  Q  L  K  E  N  P  D  Y  R  K  I  T  S  *  L  V  L  S  C  K  M  S  Q  I  *  E  G  *  V  E  G  V  C  I  E  V  V  *  G  R  I  A  R  G  V  F  F  A  I  C  R  R  I  Y  L  E  K  I  S  L  V  F  C  *  F  K  Q  C  N  S  L  *  T  L  N  H  S  C  C  S   : G  W  K  N  K  K  D </first_frame>
            <second_frame>  K  R  Q  G  Q  S  N  P  K  S  R  S  E  M  F  N  S  H  P  E  E  V  A  S  G  F  P  I  D  P  P  R  P  S  Q  V  V  E  E  A  S  N  D  P  H  V  Q  L  H  K  R  G  S  H  S  G  P  L  S  H  R  A  A  W  A  K  A  G  K  N  M  D  D  A  P  K  L  S  V  A  D  M  S  A  M  S  G  L  V  A  A  R  R  S  M  F  S  E  D  R  P  D  K  S  G  S  H  K  Q  E  V  P  K  L  I  A  R  F  P  G  S  Y  K  E  A  S  H  S  T  M  K  Q  E  Q  K  N  H  A  L  A  S  S  H  H  Q  N  E  D  G  R  T  S  N  N  D  P  V  L  :  L  G  Y  G  S  K  G  N  K  I  H  Y  S  G  P  L  L  V  P  S  G  K  M  D  Q  V  L  K  D  H  D  R  H  I  Q  E  A  V  R  R  A  R  L  D  K  A  K  A  K  K  I  Q  V  E  G  N  K  L  S  A  N  S  L  F  V  S  G  R  *  A  S  T  E  S  E  S  A  K  N  N  *  K  R  I  Q  T  I  E  K  S  L  V  S  *  Y  Y  H  V  K  *  V  K  F  E  K  G  E  L  R  E  F  V  *  K  L  F  K  E  G  *  R  G  A  F  F  S  P  F  V  E  E  F  I  W  K  R  S  P  L  F  S  A  N  L  N  N  V  T  L  S  K  H  *  I  I  L  A  V  Q  :  G  G  K  T  K  R   </second_frame>
            <third_frame>   K  D  K  V  N  P  I  Q  K  A  E  V  R  C  S  T  L  I  Q  K  K  L  P  L  V  F  Q  L  T  L  L  D  H  L  K  S  S  K  K  Q  V  M  I  P  T  C  S  F  I  S  E  V  P  I  P  G  H  C  L  T  E  L  L  G  Q  K  L  E  R  I  W  M  M  P  Q  S  F  L  *  R  T  C  Q  L  C  L  G  *  S  L  Q  G  E  A  C  S  L  K  T  V  Q  I  S  Q  V  H  T  N  R  R  F  L  N  S  *  P  G  F  P  D  P  I  K  R  L  H  I  P  Q  *  N  K  N  R  K  I  M  H  L  L  A  H  I  I  K  T  R  T  V  E  P  A  T  T  I  P  F  F :   W  D  M  D  Q  K  A  T  K  S  T  T  L  D  H  Y  *  F  H  Q  A  K  W  I  K  C  *  K  I  T  I  A  T  S  K  K  L  *  D  E  H  A  W  T  R  R  K  Q  R  K  F  R  L  K  A  T  N  Y  Q  P  I  H  Y  L  F  L  A  V  E  L  Q  L  R  A  N  R  L  R  T  T  K  R  E  S  R  L  *  K  N  H  *  L  V  S  I  I  M  *  N  E  S  N  L  R  R  V  S  *  G  S  L  Y  R  S  C  L  R  K  D  S  A  G  R  F  F  R  H  L  *  K  N  L  S  G  K  D  L  P  C  F  L  L  I  *  T  M  *  L  S  L  N  I  E  S  F  L  L  F  R :   V  E  K  Q  K  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0046G04.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3012" stop="3485"/>
                    <exon start="3573" stop="3779"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>678</number_coding_nucleotides>
                  <number_encoded_amino_acids>226</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KRQGQSNPKSRSEMFNSHPEEVASGFPIDPPRPSQVVEEASNDPHVQLHKRGSHSGPLSHRAAWAKAGKNMDDAPKLSVADMSAMSGLVAARRSMFSEDRPDKSGSHKQEVPKLIARFPGSYKEASHSTMKQEQKNHALASSHHQNEDGRTSNNDPVLLGYGSKGNKIHYSGPLLVPSGKMDQVLKDHDRHIQEAVRRARLDKAKAKKIQVEGNKLSANSLFVSGR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="3011" e_stop="3485"/>
            <exon e_start="3573" e_stop="4049"/>
            <exon e_start="4452" e_stop="4470"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.991" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.960" acc_prob="0.672" e_score="0.992"/>
          <exon-only e_score="0.474"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="3011" e_stop="3485" e_length="475"/>
          </exon>
          <intron i_serial="1" don_prob="0.991" acc_prob="0.989">
            <gDNA_intron_boundary i_start="3486" i_stop="3572" i_length="87"/>
          </intron>
          <exon e_serial="2" e_score="0.992">
            <gDNA_exon_boundary e_start="3573" e_stop="4049" e_length="477"/>
          </exon>
          <intron i_serial="2" don_prob="0.960" acc_prob="0.672">
            <gDNA_intron_boundary i_start="4050" i_stop="4451" i_length="402"/>
          </intron>
          <exon e_serial="3" e_score="0.474">
            <gDNA_exon_boundary e_start="4452" e_stop="4470" e_length="19"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3011" stop="3485"/>
              <exon start="3573" stop="3882"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E537494" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3012" stop="3485"/>
              <exon start="3573" stop="3630"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266314" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3478" stop="3485"/>
              <exon start="3573" stop="4049"/>
              <exon start="4452" stop="4470"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226422" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAAAGACAAGGTCAATCCAATCCAAAAAGCAGAAGTGAGATGTTCAACTCTCATCCAGAAGAAGTTGCCTCTGGTTTTCCAATTGACCCTCCTAGACCATCTCAAGTCGTCGAAGAAGCAAGTAATGATCCCCACGTGCAGCTTCATAAGCGAGGTTCCCATTCCGGGCCATTGTCTCACCGAGCTGCTTGGGCAAAAGCTGGAAAGAATATGGATGATGCCCCAAAGCTTTCTGTAGCGGACATGTCAGCTATGTCTGGGCTAGTCGCTGCAAGGAGAAGCATGTTCTCTGAAGACCGTCCAGATAAGTCAGGTTCACACAAACAGGAGGTTCCTAAACTCATAGCCAGGTTTCCCGGATCCTATAAAGAGGCTTCACATTCCACAATGAAACAAGAACAGAAAAATCATGCACTTGCTAGCTCACATCATCAAAACGAGGACGGTAGAACCAGCAACAACGATCCCGTTCTT : TTGGGATATGGATCAAAAGGCAACAAAATCCACTACTCTGGACCACTACTAGTTCCATCAGGCAAAATGGATCAAGTGTTGAAAGATCACGATCGCCACATCCAAGAAGCTGTAAGACGAGCACGCTTGGACAAGGCGAAAGCAAAGAAAATTCAGGTTGAAGGCAACAAATTATCAGCCAATTCATTATTTGTTTCTGGCCGTTGAGCTTCAACTGAGAGCGAATCGGCTAAGAACAACTAAAAGAGAATCCAGACTATAGAAAAATCACTAGTTAGTTAGTATTATCATGTAAAATGAGTCAAATTTGAGAAGGGTGAGTTGAGGGAGTTTGTATAGAAGTTGTTTAAGGAAGGATAGCGCGGGGCGTTTTTTTCGCCATTTGTAGAAGAATTTATCTGGAAAAGATCTCCCTTGTTTTCTGCTAATTTAAACAATGTAACTCTCTCTAAACATTGAATCATTCTTGCTGTTCAG : TTACAAAACTTTTGATATA</gDNA_template>
            <first_frame> E  K  T  R  S  I  Q  S  K  K  Q  K  *  D  V  Q  L  S  S  R  R  S  C  L  W  F  S  N  *  P  S  *  T  I  S  S  R  R  R  S  K  *  *  S  P  R  A  A  S  *  A  R  F  P  F  R  A  I  V  S  P  S  C  L  G  K  S  W  K  E  Y  G  *  C  P  K  A  F  C  S  G  H  V  S  Y  V  W  A  S  R  C  K  E  K  H  V  L  *  R  P  S  R  *  V  R  F  T  Q  T  G  G  S  *  T  H  S  Q  V  S  R  I  L  *  R  G  F  T  F  H  N  E  T  R  T  E  K  S  C  T  C  *  L  T  S  S  K  R  G  R  *  N  Q  Q  Q  R  S  R  S   : F  G  I  W  I  K  R  Q  Q  N  P  L  L  W  T  T  T  S  S  I  R  Q  N  G  S  S  V  E  R  S  R  S  P  H  P  R  S  C  K  T  S  T  L  G  Q  G  E  S  K  E  N  S  G  *  R  Q  Q  I  I  S  Q  F  I  I  C  F  W  P  L  S  F  N  *  E  R  I  G  *  E  Q  L  K  E  N  P  D  Y  R  K  I  T  S  *  L  V  L  S  C  K  M  S  Q  I  *  E  G  *  V  E  G  V  C  I  E  V  V  *  G  R  I  A  R  G  V  F  F  A  I  C  R  R  I  Y  L  E  K  I  S  L  V  F  C  *  F  K  Q  C  N  S  L  *  T  L  N  H  S  C  C  S   : V  T  K  L  L  I   </first_frame>
            <second_frame>  K  R  Q  G  Q  S  N  P  K  S  R  S  E  M  F  N  S  H  P  E  E  V  A  S  G  F  P  I  D  P  P  R  P  S  Q  V  V  E  E  A  S  N  D  P  H  V  Q  L  H  K  R  G  S  H  S  G  P  L  S  H  R  A  A  W  A  K  A  G  K  N  M  D  D  A  P  K  L  S  V  A  D  M  S  A  M  S  G  L  V  A  A  R  R  S  M  F  S  E  D  R  P  D  K  S  G  S  H  K  Q  E  V  P  K  L  I  A  R  F  P  G  S  Y  K  E  A  S  H  S  T  M  K  Q  E  Q  K  N  H  A  L  A  S  S  H  H  Q  N  E  D  G  R  T  S  N  N  D  P  V  L  :  L  G  Y  G  S  K  G  N  K  I  H  Y  S  G  P  L  L  V  P  S  G  K  M  D  Q  V  L  K  D  H  D  R  H  I  Q  E  A  V  R  R  A  R  L  D  K  A  K  A  K  K  I  Q  V  E  G  N  K  L  S  A  N  S  L  F  V  S  G  R  *  A  S  T  E  S  E  S  A  K  N  N  *  K  R  I  Q  T  I  E  K  S  L  V  S  *  Y  Y  H  V  K  *  V  K  F  E  K  G  E  L  R  E  F  V  *  K  L  F  K  E  G  *  R  G  A  F  F  S  P  F  V  E  E  F  I  W  K  R  S  P  L  F  S  A  N  L  N  N  V  T  L  S  K  H  *  I  I  L  A  V  Q  :  L  Q  N  F  *  Y  </second_frame>
            <third_frame>   K  D  K  V  N  P  I  Q  K  A  E  V  R  C  S  T  L  I  Q  K  K  L  P  L  V  F  Q  L  T  L  L  D  H  L  K  S  S  K  K  Q  V  M  I  P  T  C  S  F  I  S  E  V  P  I  P  G  H  C  L  T  E  L  L  G  Q  K  L  E  R  I  W  M  M  P  Q  S  F  L  *  R  T  C  Q  L  C  L  G  *  S  L  Q  G  E  A  C  S  L  K  T  V  Q  I  S  Q  V  H  T  N  R  R  F  L  N  S  *  P  G  F  P  D  P  I  K  R  L  H  I  P  Q  *  N  K  N  R  K  I  M  H  L  L  A  H  I  I  K  T  R  T  V  E  P  A  T  T  I  P  F  F :   W  D  M  D  Q  K  A  T  K  S  T  T  L  D  H  Y  *  F  H  Q  A  K  W  I  K  C  *  K  I  T  I  A  T  S  K  K  L  *  D  E  H  A  W  T  R  R  K  Q  R  K  F  R  L  K  A  T  N  Y  Q  P  I  H  Y  L  F  L  A  V  E  L  Q  L  R  A  N  R  L  R  T  T  K  R  E  S  R  L  *  K  N  H  *  L  V  S  I  I  M  *  N  E  S  N  L  R  R  V  S  *  G  S  L  Y  R  S  C  L  R  K  D  S  A  G  R  F  F  R  H  L  *  K  N  L  S  G  K  D  L  P  C  F  L  L  I  *  T  M  *  L  S  L  N  I  E  S  F  L  L  F  S :   Y  K  T  F  D  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0046G04.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3012" stop="3485"/>
                    <exon start="3573" stop="3779"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>678</number_coding_nucleotides>
                  <number_encoded_amino_acids>226</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KRQGQSNPKSRSEMFNSHPEEVASGFPIDPPRPSQVVEEASNDPHVQLHKRGSHSGPLSHRAAWAKAGKNMDDAPKLSVADMSAMSGLVAARRSMFSEDRPDKSGSHKQEVPKLIARFPGSYKEASHSTMKQEQKNHALASSHHQNEDGRTSNNDPVLLGYGSKGNKIHYSGPLLVPSGKMDQVLKDHDRHIQEAVRRARLDKAKAKKIQVEGNKLSANSLFVSGR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="6629" PGL_stop="7859"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="6629" e_stop="7728"/>
            <exon e_start="7836" e_stop="7859"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.891" acc_prob="0.776" e_score="0.996"/>
          <exon-only e_score="0.958"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="6629" e_stop="7728" e_length="1100"/>
          </exon>
          <intron i_serial="1" don_prob="0.891" acc_prob="0.776">
            <gDNA_intron_boundary i_start="7729" i_stop="7835" i_length="107"/>
          </intron>
          <exon e_serial="2" e_score="0.958">
            <gDNA_exon_boundary e_start="7836" e_stop="7859" e_length="24"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6629" stop="7117"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E736485" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6934" stop="7728"/>
              <exon start="7836" stop="7859"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E739690" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGATTCTTTTTGAGTGAGTTTGTCTCTCTTAAGGAAGACCTTAGATTGCTTTTTTTTGCTTGTTTGTACTGTTTTTCTTGGTAAATAGGTTGATAACTTGAATAAAATGAAGTTGAGAGACTTCTGAAATGATGGGTTTGGCCTTCCTTTTACTGAAAATGTGTTCTTGATTCGATATGGCTATGGTGAAAGTGAAAGGATGTGCTAGGATTCTAAGAATTTCCCAGCTGGTTAATGTTGTGGCCCTTGGGCTACATACAAGTTATACGTAGATAACAATGGAGGGTTCATCTGAATCTGGTTGGGAGGGATCAGATAGTTATAGGGGTTTGAATTCTTCAGCTCTTGTGGACAGGAATCCTAGATTTCAAACGAGCAGCATTAGGTCCTCCAATGATGTGTTGCATGATTCTGGGTTTGTTCCAGGTAGAAAGGGGAGGGAGATAATTGAGTTCCCTCCTGCAAATCATCTTAAAGCCCAAGGTGGGGTTGCAGAGGATAGGCTCACTGTGGATCGAGGTTGTCGCGGAACAGACTTTAGTGGTGTTAGTTTGAGGCAGTGGCTGGACAACCCAGAGAGAGCTGTTGATGCTCTTGAATGTCTGCACATATTCACCCAAATTGTGGAGATTGTAAACCTGGCACATTCACAGGGAATAGTTGTTCATAATGCACGACCATCATGTTTTGTCATGTCCTCTTTCAAACGTATTGCATTCATCGAATCCGTATCCTGCTCGGATTCAGGTTCAGATTCATCAGATGATGGTTTAAACAGCCAAACTGTCGAGTTAAAGGATTCATCTTCAGTTTTGCCTCATAAATCGGAAGGGCTGGGGATTCATAGTTCTCAGCTTGAGAAGATTTCTGTAAAAGCTTCAATCGGATTATCTGAAAACTGTTGCTTACAGTCAAGCTCAGGCCATATGGTTCAGACTTTAGAAGCTAGTATGAACAGACTTGAAGAAAAACAGCACACCTTCCCAATGAAACAAATGTTGCTCATGGAAACCAATTGGTACACTAGTCCAGAAGAAATTGCTGGTGCTCCAAGCTCTTGTGCTTCAGACGTTTACCGACTTGGAGTCCTTCTCTTCGAG : CTATTCTGCACCTTCAGCTCATCA</gDNA_template>
            <first_frame> *  F  F  L  S  E  F  V  S  L  K  E  D  L  R  L  L  F  F  A  C  L  Y  C  F  S  W  *  I  G  *  *  L  E  *  N  E  V  E  R  L  L  K  *  W  V  W  P  S  F  Y  *  K  C  V  L  D  S  I  W  L  W  *  K  *  K  D  V  L  G  F  *  E  F  P  S  W  L  M  L  W  P  L  G  Y  I  Q  V  I  R  R  *  Q  W  R  V  H  L  N  L  V  G  R  D  Q  I  V  I  G  V  *  I  L  Q  L  L  W  T  G  I  L  D  F  K  R  A  A  L  G  P  P  M  M  C  C  M  I  L  G  L  F  Q  V  E  R  G  G  R  *  L  S  S  L  L  Q  I  I  L  K  P  K  V  G  L  Q  R  I  G  S  L  W  I  E  V  V  A  E  Q  T  L  V  V  L  V  *  G  S  G  W  T  T  Q  R  E  L  L  M  L  L  N  V  C  T  Y  S  P  K  L  W  R  L  *  T  W  H  I  H  R  E  *  L  F  I  M  H  D  H  H  V  L  S  C  P  L  S  N  V  L  H  S  S  N  P  Y  P  A  R  I  Q  V  Q  I  H  Q  M  M  V  *  T  A  K  L  S  S  *  R  I  H  L  Q  F  C  L  I  N  R  K  G  W  G  F  I  V  L  S  L  R  R  F  L  *  K  L  Q  S  D  Y  L  K  T  V  A  Y  S  Q  A  Q  A  I  W  F  R  L  *  K  L  V  *  T  D  L  K  K  N  S  T  P  S  Q  *  N  K  C  C  S  W  K  P  I  G  T  L  V  Q  K  K  L  L  V  L  Q  A  L  V  L  Q  T  F  T  D  L  E  S  F  S  S  S :   Y  S  A  P  S  A  H   </first_frame>
            <second_frame>  D  S  F  *  V  S  L  S  L  L  R  K  T  L  D  C  F  F  L  L  V  C  T  V  F  L  G  K  *  V  D  N  L  N  K  M  K  L  R  D  F  *  N  D  G  F  G  L  P  F  T  E  N  V  F  L  I  R  Y  G  Y  G  E  S  E  R  M  C  *  D  S  K  N  F  P  A  G  *  C  C  G  P  W  A  T  Y  K  L  Y  V  D  N  N  G  G  F  I  *  I  W  L  G  G  I  R  *  L  *  G  F  E  F  F  S  S  C  G  Q  E  S  *  I  S  N  E  Q  H  *  V  L  Q  *  C  V  A  *  F  W  V  C  S  R  *  K  G  E  G  D  N  *  V  P  S  C  K  S  S  *  S  P  R  W  G  C  R  G  *  A  H  C  G  S  R  L  S  R  N  R  L  *  W  C  *  F  E  A  V  A  G  Q  P  R  E  S  C  *  C  S  *  M  S  A  H  I  H  P  N  C  G  D  C  K  P  G  T  F  T  G  N  S  C  S  *  C  T  T  I  M  F  C  H  V  L  F  Q  T  Y  C  I  H  R  I  R  I  L  L  G  F  R  F  R  F  I  R  *  W  F  K  Q  P  N  C  R  V  K  G  F  I  F  S  F  A  S  *  I  G  R  A  G  D  S  *  F  S  A  *  E  D  F  C  K  S  F  N  R  I  I  *  K  L  L  L  T  V  K  L  R  P  Y  G  S  D  F  R  S  *  Y  E  Q  T  *  R  K  T  A  H  L  P  N  E  T  N  V  A  H  G  N  Q  L  V  H  *  S  R  R  N  C  W  C  S  K  L  L  C  F  R  R  L  P  T  W  S  P  S  L  R   : A  I  L  H  L  Q  L  I  </second_frame>
            <third_frame>   I  L  F  E  *  V  C  L  S  *  G  R  P  *  I  A  F  F  C  L  F  V  L  F  F  L  V  N  R  L  I  T  *  I  K  *  S  *  E  T  S  E  M  M  G  L  A  F  L  L  L  K  M  C  S  *  F  D  M  A  M  V  K  V  K  G  C  A  R  I  L  R  I  S  Q  L  V  N  V  V  A  L  G  L  H  T  S  Y  T  *  I  T  M  E  G  S  S  E  S  G  W  E  G  S  D  S  Y  R  G  L  N  S  S  A  L  V  D  R  N  P  R  F  Q  T  S  S  I  R  S  S  N  D  V  L  H  D  S  G  F  V  P  G  R  K  G  R  E  I  I  E  F  P  P  A  N  H  L  K  A  Q  G  G  V  A  E  D  R  L  T  V  D  R  G  C  R  G  T  D  F  S  G  V  S  L  R  Q  W  L  D  N  P  E  R  A  V  D  A  L  E  C  L  H  I  F  T  Q  I  V  E  I  V  N  L  A  H  S  Q  G  I  V  V  H  N  A  R  P  S  C  F  V  M  S  S  F  K  R  I  A  F  I  E  S  V  S  C  S  D  S  G  S  D  S  S  D  D  G  L  N  S  Q  T  V  E  L  K  D  S  S  S  V  L  P  H  K  S  E  G  L  G  I  H  S  S  Q  L  E  K  I  S  V  K  A  S  I  G  L  S  E  N  C  C  L  Q  S  S  S  G  H  M  V  Q  T  L  E  A  S  M  N  R  L  E  E  K  Q  H  T  F  P  M  K  Q  M  L  L  M  E  T  N  W  Y  T  S  P  E  E  I  A  G  A  P  S  S  C  A  S  D  V  Y  R  L  G  V  L  L  F  E  :  L  F  C  T  F  S  S  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0046G04.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="6901" stop="7728"/>
                    <exon start="7836" stop="7859"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>852</number_coding_nucleotides>
                  <number_encoded_amino_acids>284</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ITMEGSSESGWEGSDSYRGLNSSALVDRNPRFQTSSIRSSNDVLHDSGFVPGRKGREIIEFPPANHLKAQGGVAEDRLTVDRGCRGTDFSGVSLRQWLDNPERAVDALECLHIFTQIVEIVNLAHSQGIVVHNARPSCFVMSSFKRIAFIESVSCSDSGSDSSDDGLNSQTVELKDSSSVLPHKSEGLGIHSSQLEKISVKASIGLSENCCLQSSSGHMVQTLEASMNRLEEKQHTFPMKQMLLMETNWYTSPEEIAGAPSSCASDVYRLGVLLFELFCTFSSS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="7889" PGL_stop="14484"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="10710" e_stop="10767"/>
            <exon e_start="10841" e_stop="11033"/>
            <exon e_start="11117" e_stop="11428"/>
            <exon e_start="11741" e_stop="11800"/>
            <exon e_start="13958" e_stop="14484"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="1.000" e_score="0.966"/>
          <exon-intron don_prob="0.662" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.825" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.966">
            <gDNA_exon_boundary e_start="10710" e_stop="10767" e_length="58"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="1.000">
            <gDNA_intron_boundary i_start="10768" i_stop="10840" i_length="73"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="10841" e_stop="11033" e_length="193"/>
          </exon>
          <intron i_serial="2" don_prob="0.662" acc_prob="0.999">
            <gDNA_intron_boundary i_start="11034" i_stop="11116" i_length="83"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="11117" e_stop="11428" e_length="312"/>
          </exon>
          <intron i_serial="3" don_prob="0.988" acc_prob="0.825">
            <gDNA_intron_boundary i_start="11429" i_stop="11740" i_length="312"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="11741" e_stop="11800" e_length="60"/>
          </exon>
          <intron i_serial="4" don_prob="0.993" acc_prob="0.997">
            <gDNA_intron_boundary i_start="11801" i_stop="13957" i_length="2157"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="13958" e_stop="14484" e_length="527"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10710" stop="10767"/>
              <exon start="10841" stop="11033"/>
              <exon start="11117" stop="11428"/>
              <exon start="11741" stop="11800"/>
              <exon start="13958" stop="14093"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616173" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10850" stop="11033"/>
              <exon start="11117" stop="11428"/>
              <exon start="11741" stop="11781"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551135" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10850" stop="11033"/>
              <exon start="11117" stop="11428"/>
              <exon start="11741" stop="11781"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688928" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10851" stop="11033"/>
              <exon start="11117" stop="11428"/>
              <exon start="11741" stop="11800"/>
              <exon start="13958" stop="14181"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261558" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10851" stop="11033"/>
              <exon start="11117" stop="11428"/>
              <exon start="11741" stop="11800"/>
              <exon start="13958" stop="14028"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261352" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11160" stop="11428"/>
              <exon start="11741" stop="11800"/>
              <exon start="13958" stop="14476"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738772" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11160" stop="11428"/>
              <exon start="11741" stop="11800"/>
              <exon start="13958" stop="14456"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E736743" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11186" stop="11428"/>
              <exon start="11741" stop="11800"/>
              <exon start="13958" stop="14462"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E739624" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11764" stop="11800"/>
              <exon start="13958" stop="14477"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284901" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14128" stop="14484"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217390" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTGGAATGGCTATATCAAAAGCCAGATCGCGTCAAGTAACTTTGAAGGTGTGGTGCAG : GTATGGGATGTCACAAGAAGTCAGGTTTTCATGGAAATGAGAGAACATGAAAGGCGTGTCTGGTCTGTTGACTTTTCTGCAGCAGATCCAACCATGTTGGCTAGCGGGAGTGATGATGGTTCTGTCAAACTCTGGAATATCAATCAGGCAATTCTATTTCTGCACTTGGTGGATGTCAGCTTTGAAACTAAAC : GGAGTAAGTGTTGGAACCATCAAAACAAAAGCCAATGTCTGCTGCGTTCAGTTCCCCTTTGATTCTGGTCGCTCCCTTGCTTTTGGTTCAGCTGATCACAAGATATATTACTATGATCTACGTAACTCAAAAATGCCTCTATGCACATTAATCGGGCACAACAAGACTGTGAGCTATGTCAAGTTCATAGATTCCACAACGCTTGTGTCTGCATCTACAGATAACACATTAAAACTATGGGATTTGTCAATTTGCACATCCCGGATTCTTGATACACCTCTTCAGTCATTTACTGGACACATGAATGTAAAG : AACTTTGTTGGCTTATCTGTATCTGAAGGTTACATTGCTACTGGCTCGGAGACGAATGAG : GTCTTTGTCTACCACAAAGCTTTTCCTATGCCTGCATTGTCATTTAAATTTAATAGCACAGATCCTCTATCTGGTGGTGAAGTGGATGACCAAGCACAGTTCATCTCATCTGTCTGTTGGCGTGATCAGTCCTCTACCTTAGTTGCTGCGAATTCTATGGGAAATATCAAGCTGTTGGAGATGGCTTAATGTGGTCCATGTTCTCCAAAGGTTCGTACTTGCCTTCAGGATAAAAAGACGTGAACGGTAAGGGTTCTGCATTGATGAACAAATAGGTTGCTGTGAAGAGGTCAACTAGATCGGATACCATAGTGAACATGGAGATTGCCATCATCAAGAAACCAAGATTTTTGCTAGTAGTAATCATATAGTGGAAGTAGATTCAACTGGAAATATGAGAACATATATTGGTCTTAGTGTGAAATGCTGTATATAAAAGGGAAAGGATGCAAATATGAATTTCTCTGTATATTCTGTAATTTCCAGAGTTCAAATGAATTTTCTTGAAGGAACTGTGTGAATGTGAT</gDNA_template>
            <first_frame> L  E  W  L  Y  Q  K  P  D  R  V  K  *  L  *  R  C  G  A   : G  M  G  C  H  K  K  S  G  F  H  G  N  E  R  T  *  K  A  C  L  V  C  *  L  F  C  S  R  S  N  H  V  G  *  R  E  *  *  W  F  C  Q  T  L  E  Y  Q  S  G  N  S  I  S  A  L  G  G  C  Q  L  *  N  *  T :   E  *  V  L  E  P  S  K  Q  K  P  M  S  A  A  F  S  S  P  L  I  L  V  A  P  L  L  L  V  Q  L  I  T  R  Y  I  T  M  I  Y  V  T  Q  K  C  L  Y  A  H  *  S  G  T  T  R  L  *  A  M  S  S  S  *  I  P  Q  R  L  C  L  H  L  Q  I  T  H  *  N  Y  G  I  C  Q  F  A  H  P  G  F  L  I  H  L  F  S  H  L  L  D  T  *  M  *  R :   T  L  L  A  Y  L  Y  L  K  V  T  L  L  L  A  R  R  R  M  R :   S  L  S  T  T  K  L  F  L  C  L  H  C  H  L  N  L  I  A  Q  I  L  Y  L  V  V  K  W  M  T  K  H  S  S  S  H  L  S  V  G  V  I  S  P  L  P  *  L  L  R  I  L  W  E  I  S  S  C  W  R  W  L  N  V  V  H  V  L  Q  R  F  V  L  A  F  R  I  K  R  R  E  R  *  G  F  C  I  D  E  Q  I  G  C  C  E  E  V  N  *  I  G  Y  H  S  E  H  G  D  C  H  H  Q  E  T  K  I  F  A  S  S  N  H  I  V  E  V  D  S  T  G  N  M  R  T  Y  I  G  L  S  V  K  C  C  I  *  K  G  K  D  A  N  M  N  F  S  V  Y  S  V  I  S  R  V  Q  M  N  F  L  E  G  T  V  *  M  *  </first_frame>
            <second_frame>  W  N  G  Y  I  K  S  Q  I  A  S  S  N  F  E  G  V  V  Q  :  V  W  D  V  T  R  S  Q  V  F  M  E  M  R  E  H  E  R  R  V  W  S  V  D  F  S  A  A  D  P  T  M  L  A  S  G  S  D  D  G  S  V  K  L  W  N  I  N  Q  A  I  L  F  L  H  L  V  D  V  S  F  E  T  K   : R  S  K  C  W  N  H  Q  N  K  S  Q  C  L  L  R  S  V  P  L  *  F  W  S  L  P  C  F  W  F  S  *  S  Q  D  I  L  L  *  S  T  *  L  K  N  A  S  M  H  I  N  R  A  Q  Q  D  C  E  L  C  Q  V  H  R  F  H  N  A  C  V  C  I  Y  R  *  H  I  K  T  M  G  F  V  N  L  H  I  P  D  S  *  Y  T  S  S  V  I  Y  W  T  H  E  C  K   : E  L  C  W  L  I  C  I  *  R  L  H  C  Y  W  L  G  D  E  *   : G  L  C  L  P  Q  S  F  S  Y  A  C  I  V  I  *  I  *  *  H  R  S  S  I  W  W  *  S  G  *  P  S  T  V  H  L  I  C  L  L  A  *  S  V  L  Y  L  S  C  C  E  F  Y  G  K  Y  Q  A  V  G  D  G  L  M  W  S  M  F  S  K  G  S  Y  L  P  S  G  *  K  D  V  N  G  K  G  S  A  L  M  N  K  *  V  A  V  K  R  S  T  R  S  D  T  I  V  N  M  E  I  A  I  I  K  K  P  R  F  L  L  V  V  I  I  *  W  K  *  I  Q  L  E  I  *  E  H  I  L  V  L  V  *  N  A  V  Y  K  R  E  R  M  Q  I  *  I  S  L  Y  I  L  *  F  P  E  F  K  *  I  F  L  K  E  L  C  E  C  D </second_frame>
            <third_frame>   G  M  A  I  S  K  A  R  S  R  Q  V  T  L  K  V  W  C  R :   Y  G  M  S  Q  E  V  R  F  S  W  K  *  E  N  M  K  G  V  S  G  L  L  T  F  L  Q  Q  I  Q  P  C  W  L  A  G  V  M  M  V  L  S  N  S  G  I  S  I  R  Q  F  Y  F  C  T  W  W  M  S  A  L  K  L  N  :  G  V  S  V  G  T  I  K  T  K  A  N  V  C  C  V  Q  F  P  F  D  S  G  R  S  L  A  F  G  S  A  D  H  K  I  Y  Y  Y  D  L  R  N  S  K  M  P  L  C  T  L  I  G  H  N  K  T  V  S  Y  V  K  F  I  D  S  T  T  L  V  S  A  S  T  D  N  T  L  K  L  W  D  L  S  I  C  T  S  R  I  L  D  T  P  L  Q  S  F  T  G  H  M  N  V  K  :  N  F  V  G  L  S  V  S  E  G  Y  I  A  T  G  S  E  T  N  E  :  V  F  V  Y  H  K  A  F  P  M  P  A  L  S  F  K  F  N  S  T  D  P  L  S  G  G  E  V  D  D  Q  A  Q  F  I  S  S  V  C  W  R  D  Q  S  S  T  L  V  A  A  N  S  M  G  N  I  K  L  L  E  M  A  *  C  G  P  C  S  P  K  V  R  T  C  L  Q  D  K  K  T  *  T  V  R  V  L  H  *  *  T  N  R  L  L  *  R  G  Q  L  D  R  I  P  *  *  T  W  R  L  P  S  S  R  N  Q  D  F  C  *  *  *  S  Y  S  G  S  R  F  N  W  K  Y  E  N  I  Y  W  S  *  C  E  M  L  Y  I  K  G  K  G  C  K  Y  E  F  L  C  I  F  C  N  F  Q  S  S  N  E  F  S  *  R  N  C  V  N  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0046G04.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10881" stop="11033"/>
                    <exon start="11117" stop="11428"/>
                    <exon start="11741" stop="11800"/>
                    <exon start="13958" stop="14146"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>711</number_coding_nucleotides>
                  <number_encoded_amino_acids>237</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ENMKGVSGLLTFLQQIQPCWLAGVMMVLSNSGISIRQFYFCTWWMSALKLNGVSVGTIKTKANVCCVQFPFDSGRSLAFGSADHKIYYYDLRNSKMPLCTLIGHNKTVSYVKFIDSTTLVSASTDNTLKLWDLSICTSRILDTPLQSFTGHMNVKNFVGLSVSEGYIATGSETNEVFVYHKAFPMPALSFKFNSTDPLSGGEVDDQAQFISSVCWRDQSSTLVAANSMGNIKLLEMA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="7889" e_stop="7993"/>
            <exon e_start="9816" e_stop="10767"/>
            <exon e_start="10841" e_stop="10987"/>
            <exon e_start="11117" e_stop="11140"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.664" acc_prob="0.732" e_score="0.962"/>
          <exon-intron don_prob="0.992" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.999" e_score="0.993"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.962">
            <gDNA_exon_boundary e_start="7889" e_stop="7993" e_length="105"/>
          </exon>
          <intron i_serial="1" don_prob="0.664" acc_prob="0.732">
            <gDNA_intron_boundary i_start="7994" i_stop="9815" i_length="1822"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="9816" e_stop="10767" e_length="952"/>
          </exon>
          <intron i_serial="2" don_prob="0.992" acc_prob="1.000">
            <gDNA_intron_boundary i_start="10768" i_stop="10840" i_length="73"/>
          </intron>
          <exon e_serial="3" e_score="0.993">
            <gDNA_exon_boundary e_start="10841" e_stop="10987" e_length="147"/>
          </exon>
          <intron i_serial="3" don_prob="0.982" acc_prob="0.999">
            <gDNA_intron_boundary i_start="10988" i_stop="11116" i_length="129"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="11117" e_stop="11140" e_length="24"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7889" stop="7993"/>
              <exon start="9816" stop="10289"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E421654" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7963" stop="7993"/>
              <exon start="9816" stop="10233"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E211594" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9830" stop="10502"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327800" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10075" stop="10767"/>
              <exon start="10841" stop="10987"/>
              <exon start="11117" stop="11140"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E736285" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAGACATCGTGTCCTCCCTCCTCAGTTGTTGTTGAAATGGCCAAAAGAAGCTTCATTTTGCTTATGGTTACTGCACCCCGAGCCGAGCAATAGGCCAAAAATGGG : TGACTTGCTAGAAAGCGACTTCCTTAATGCTCCAAGAGATGAGTTTGAAGAACGTGAAGCAGCAATAGAACTTAGAGAAGAAATAGAGGAGCAAGAGTTATTGCTGGAATTCCTTTTGCTAATTCAACAACGAAAGCTGGAGGCTTTACACAACTTACGTGAGATTGTATCTTTTTTATCATCTGACATAGAAGAGGTCTCAAAGATGCAGAAGACCCTTAGAGTCGAAAGGGGTTCAAATCAGGAGCCAGTAAGGGATTTAGGTTCAGGAAAGATAAATATTGCTGAAGATGATGATGCTGGGTGCTTTGGATCTAGAAAGAGATTTAAGCCAGGCCTTTCTATACACACAGCTGAGGAATACAATGGCAATCCAGATGAGTCTGAGAAACATGTCGAAAACAAAGGGAGCATTCTGGCAAAAAATTCCCGGTTGATGAAGAACTTCAAGAAATTGGAGGTGGCTTATTTCATGACAAGACGTAGGGTTATCAAACCGACAGGCAAATCACTATATAGACATTCTCAGGCAAGTACGGATTGTAGAACTGCAGTTCTGGCACCTGAAAGAAGTTCAATGAGTAATTTGGCATCAAAAGAGGGGTGCAATGAGGATAGACAGAGTGGATCAATCAGTTCATTCCTGGAGGGACTGTGCAAGTATCTATCTTATAGCAAGCTGGAAGTGAAGGCTGACTTGAAGCAAGGGGATCTTCTAAATTCTTCCAATCTTGTATGTGCTCTAGGCTTTGATCGTGATGGTGAATATTTTGCAACTGCTGGTGTAAATAAGAAGATCAAAGTTTTTGAATATAATTCAATTGTTAATGAGGACCGCGATATCCACTATCCAGTTGTTGAAATGGCTAGTAGATCTAAGCTAAGCAGCATATGTTGGAATGGCTATATCAAAAGCCAGATCGCGTCAAGTAACTTTGAAGGTGTGGTGCAG : GTATGGGATGTCACAAGAAGTCAGGTTTTCATGGAAATGAGAGAACATGAAAGGCGTGTCTGGTCTGTTGACTTTTCTGCAGCAGATCCAACCATGTTGGCTAGCGGGAGTGATGATGGTTCTGTCAAACTCTGGAATATCAATCAG : GGAGTAAGTGTTGGAACCATCAAA</gDNA_template>
            <first_frame> E  T  S  C  P  P  S  S  V  V  V  E  M  A  K  R  S  F  I  L  L  M  V  T  A  P  R  A  E  Q  *  A  K  N  G  :  *  L  A  R  K  R  L  P  *  C  S  K  R  *  V  *  R  T  *  S  S  N  R  T  *  R  R  N  R  G  A  R  V  I  A  G  I  P  F  A  N  S  T  T  K  A  G  G  F  T  Q  L  T  *  D  C  I  F  F  I  I  *  H  R  R  G  L  K  D  A  E  D  P  *  S  R  K  G  F  K  S  G  A  S  K  G  F  R  F  R  K  D  K  Y  C  *  R  *  *  C  W  V  L  W  I  *  K  E  I  *  A  R  P  F  Y  T  H  S  *  G  I  Q  W  Q  S  R  *  V  *  E  T  C  R  K  Q  R  E  H  S  G  K  K  F  P  V  D  E  E  L  Q  E  I  G  G  G  L  F  H  D  K  T  *  G  Y  Q  T  D  R  Q  I  T  I  *  T  F  S  G  K  Y  G  L  *  N  C  S  S  G  T  *  K  K  F  N  E  *  F  G  I  K  R  G  V  Q  *  G  *  T  E  W  I  N  Q  F  I  P  G  G  T  V  Q  V  S  I  L  *  Q  A  G  S  E  G  *  L  E  A  R  G  S  S  K  F  F  Q  S  C  M  C  S  R  L  *  S  *  W  *  I  F  C  N  C  W  C  K  *  E  D  Q  S  F  *  I  *  F  N  C  *  *  G  P  R  Y  P  L  S  S  C  *  N  G  *  *  I  *  A  K  Q  H  M  L  E  W  L  Y  Q  K  P  D  R  V  K  *  L  *  R  C  G  A   : G  M  G  C  H  K  K  S  G  F  H  G  N  E  R  T  *  K  A  C  L  V  C  *  L  F  C  S  R  S  N  H  V  G  *  R  E  *  *  W  F  C  Q  T  L  E  Y  Q  S   : G  S  K  C  W  N  H  Q  </first_frame>
            <second_frame>  R  H  R  V  L  P  P  Q  L  L  L  K  W  P  K  E  A  S  F  C  L  W  L  L  H  P  E  P  S  N  R  P  K  M  G :   D  L  L  E  S  D  F  L  N  A  P  R  D  E  F  E  E  R  E  A  A  I  E  L  R  E  E  I  E  E  Q  E  L  L  L  E  F  L  L  L  I  Q  Q  R  K  L  E  A  L  H  N  L  R  E  I  V  S  F  L  S  S  D  I  E  E  V  S  K  M  Q  K  T  L  R  V  E  R  G  S  N  Q  E  P  V  R  D  L  G  S  G  K  I  N  I  A  E  D  D  D  A  G  C  F  G  S  R  K  R  F  K  P  G  L  S  I  H  T  A  E  E  Y  N  G  N  P  D  E  S  E  K  H  V  E  N  K  G  S  I  L  A  K  N  S  R  L  M  K  N  F  K  K  L  E  V  A  Y  F  M  T  R  R  R  V  I  K  P  T  G  K  S  L  Y  R  H  S  Q  A  S  T  D  C  R  T  A  V  L  A  P  E  R  S  S  M  S  N  L  A  S  K  E  G  C  N  E  D  R  Q  S  G  S  I  S  S  F  L  E  G  L  C  K  Y  L  S  Y  S  K  L  E  V  K  A  D  L  K  Q  G  D  L  L  N  S  S  N  L  V  C  A  L  G  F  D  R  D  G  E  Y  F  A  T  A  G  V  N  K  K  I  K  V  F  E  Y  N  S  I  V  N  E  D  R  D  I  H  Y  P  V  V  E  M  A  S  R  S  K  L  S  S  I  C  W  N  G  Y  I  K  S  Q  I  A  S  S  N  F  E  G  V  V  Q  :  V  W  D  V  T  R  S  Q  V  F  M  E  M  R  E  H  E  R  R  V  W  S  V  D  F  S  A  A  D  P  T  M  L  A  S  G  S  D  D  G  S  V  K  L  W  N  I  N  Q  :  G  V  S  V  G  T  I  K </second_frame>
            <third_frame>   D  I  V  S  S  L  L  S  C  C  *  N  G  Q  K  K  L  H  F  A  Y  G  Y  C  T  P  S  R  A  I  G  Q  K  W   : V  T  C  *  K  A  T  S  L  M  L  Q  E  M  S  L  K  N  V  K  Q  Q  *  N  L  E  K  K  *  R  S  K  S  Y  C  W  N  S  F  C  *  F  N  N  E  S  W  R  L  Y  T  T  Y  V  R  L  Y  L  F  Y  H  L  T  *  K  R  S  Q  R  C  R  R  P  L  E  S  K  G  V  Q  I  R  S  Q  *  G  I  *  V  Q  E  R  *  I  L  L  K  M  M  M  L  G  A  L  D  L  E  R  D  L  S  Q  A  F  L  Y  T  Q  L  R  N  T  M  A  I  Q  M  S  L  R  N  M  S  K  T  K  G  A  F  W  Q  K  I  P  G  *  *  R  T  S  R  N  W  R  W  L  I  S  *  Q  D  V  G  L  S  N  R  Q  A  N  H  Y  I  D  I  L  R  Q  V  R  I  V  E  L  Q  F  W  H  L  K  E  V  Q  *  V  I  W  H  Q  K  R  G  A  M  R  I  D  R  V  D  Q  S  V  H  S  W  R  D  C  A  S  I  Y  L  I  A  S  W  K  *  R  L  T  *  S  K  G  I  F  *  I  L  P  I  L  Y  V  L  *  A  L  I  V  M  V  N  I  L  Q  L  L  V  *  I  R  R  S  K  F  L  N  I  I  Q  L  L  M  R  T  A  I  S  T  I  Q  L  L  K  W  L  V  D  L  S  *  A  A  Y  V  G  M  A  I  S  K  A  R  S  R  Q  V  T  L  K  V  W  C  R :   Y  G  M  S  Q  E  V  R  F  S  W  K  *  E  N  M  K  G  V  S  G  L  L  T  F  L  Q  Q  I  Q  P  C  W  L  A  G  V  M  M  V  L  S  N  S  G  I  S  I  R :   E  *  V  L  E  P  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0046G04.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7890" stop="7993"/>
                    <exon start="9816" stop="10767"/>
                    <exon start="10841" stop="10987"/>
                    <exon start="11117" stop="11140"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1227</number_coding_nucleotides>
                  <number_encoded_amino_acids>409</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RHRVLPPQLLLKWPKEASFCLWLLHPEPSNRPKMGDLLESDFLNAPRDEFEEREAAIELREEIEEQELLLEFLLLIQQRKLEALHNLREIVSFLSSDIEEVSKMQKTLRVERGSNQEPVRDLGSGKINIAEDDDAGCFGSRKRFKPGLSIHTAEEYNGNPDESEKHVENKGSILAKNSRLMKNFKKLEVAYFMTRRRVIKPTGKSLYRHSQASTDCRTAVLAPERSSMSNLASKEGCNEDRQSGSISSFLEGLCKYLSYSKLEVKADLKQGDLLNSSNLVCALGFDRDGEYFATAGVNKKIKVFEYNSIVNEDRDIHYPVVEMASRSKLSSICWNGYIKSQIASSNFEGVVQVWDVTRSQVFMEMREHERRVWSVDFSAADPTMLASGSDDGSVKLWNINQGVSVGTIK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="9417" e_stop="9478"/>
            <exon e_start="9816" e_stop="10767"/>
            <exon e_start="10841" e_stop="10987"/>
            <exon e_start="11117" e_stop="11140"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.870" acc_prob="0.732" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.999" e_score="0.993"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="9417" e_stop="9478" e_length="62"/>
          </exon>
          <intron i_serial="1" don_prob="0.870" acc_prob="0.732">
            <gDNA_intron_boundary i_start="9479" i_stop="9815" i_length="337"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="9816" e_stop="10767" e_length="952"/>
          </exon>
          <intron i_serial="2" don_prob="0.992" acc_prob="1.000">
            <gDNA_intron_boundary i_start="10768" i_stop="10840" i_length="73"/>
          </intron>
          <exon e_serial="3" e_score="0.993">
            <gDNA_exon_boundary e_start="10841" e_stop="10987" e_length="147"/>
          </exon>
          <intron i_serial="3" don_prob="0.982" acc_prob="0.999">
            <gDNA_intron_boundary i_start="10988" i_stop="11116" i_length="129"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="11117" e_stop="11140" e_length="24"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9417" stop="9478"/>
              <exon start="9816" stop="10242"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331266" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9830" stop="10502"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327800" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10075" stop="10767"/>
              <exon start="10841" stop="10987"/>
              <exon start="11117" stop="11140"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E736285" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGTAGTGGCAAGGATTGCATACCCTCTACCATCCCAGACCCCACTTGGTGGGATTTCACTGG : TGACTTGCTAGAAAGCGACTTCCTTAATGCTCCAAGAGATGAGTTTGAAGAACGTGAAGCAGCAATAGAACTTAGAGAAGAAATAGAGGAGCAAGAGTTATTGCTGGAATTCCTTTTGCTAATTCAACAACGAAAGCTGGAGGCTTTACACAACTTACGTGAGATTGTATCTTTTTTATCATCTGACATAGAAGAGGTCTCAAAGATGCAGAAGACCCTTAGAGTCGAAAGGGGTTCAAATCAGGAGCCAGTAAGGGATTTAGGTTCAGGAAAGATAAATATTGCTGAAGATGATGATGCTGGGTGCTTTGGATCTAGAAAGAGATTTAAGCCAGGCCTTTCTATACACACAGCTGAGGAATACAATGGCAATCCAGATGAGTCTGAGAAACATGTCGAAAACAAAGGGAGCATTCTGGCAAAAAATTCCCGGTTGATGAAGAACTTCAAGAAATTGGAGGTGGCTTATTTCATGACAAGACGTAGGGTTATCAAACCGACAGGCAAATCACTATATAGACATTCTCAGGCAAGTACGGATTGTAGAACTGCAGTTCTGGCACCTGAAAGAAGTTCAATGAGTAATTTGGCATCAAAAGAGGGGTGCAATGAGGATAGACAGAGTGGATCAATCAGTTCATTCCTGGAGGGACTGTGCAAGTATCTATCTTATAGCAAGCTGGAAGTGAAGGCTGACTTGAAGCAAGGGGATCTTCTAAATTCTTCCAATCTTGTATGTGCTCTAGGCTTTGATCGTGATGGTGAATATTTTGCAACTGCTGGTGTAAATAAGAAGATCAAAGTTTTTGAATATAATTCAATTGTTAATGAGGACCGCGATATCCACTATCCAGTTGTTGAAATGGCTAGTAGATCTAAGCTAAGCAGCATATGTTGGAATGGCTATATCAAAAGCCAGATCGCGTCAAGTAACTTTGAAGGTGTGGTGCAG : GTATGGGATGTCACAAGAAGTCAGGTTTTCATGGAAATGAGAGAACATGAAAGGCGTGTCTGGTCTGTTGACTTTTCTGCAGCAGATCCAACCATGTTGGCTAGCGGGAGTGATGATGGTTCTGTCAAACTCTGGAATATCAATCAG : GGAGTAAGTGTTGGAACCATCAAA</gDNA_template>
            <first_frame> G  S  G  K  D  C  I  P  S  T  I  P  D  P  T  W  W  D  F  T  G :   D  L  L  E  S  D  F  L  N  A  P  R  D  E  F  E  E  R  E  A  A  I  E  L  R  E  E  I  E  E  Q  E  L  L  L  E  F  L  L  L  I  Q  Q  R  K  L  E  A  L  H  N  L  R  E  I  V  S  F  L  S  S  D  I  E  E  V  S  K  M  Q  K  T  L  R  V  E  R  G  S  N  Q  E  P  V  R  D  L  G  S  G  K  I  N  I  A  E  D  D  D  A  G  C  F  G  S  R  K  R  F  K  P  G  L  S  I  H  T  A  E  E  Y  N  G  N  P  D  E  S  E  K  H  V  E  N  K  G  S  I  L  A  K  N  S  R  L  M  K  N  F  K  K  L  E  V  A  Y  F  M  T  R  R  R  V  I  K  P  T  G  K  S  L  Y  R  H  S  Q  A  S  T  D  C  R  T  A  V  L  A  P  E  R  S  S  M  S  N  L  A  S  K  E  G  C  N  E  D  R  Q  S  G  S  I  S  S  F  L  E  G  L  C  K  Y  L  S  Y  S  K  L  E  V  K  A  D  L  K  Q  G  D  L  L  N  S  S  N  L  V  C  A  L  G  F  D  R  D  G  E  Y  F  A  T  A  G  V  N  K  K  I  K  V  F  E  Y  N  S  I  V  N  E  D  R  D  I  H  Y  P  V  V  E  M  A  S  R  S  K  L  S  S  I  C  W  N  G  Y  I  K  S  Q  I  A  S  S  N  F  E  G  V  V  Q  :  V  W  D  V  T  R  S  Q  V  F  M  E  M  R  E  H  E  R  R  V  W  S  V  D  F  S  A  A  D  P  T  M  L  A  S  G  S  D  D  G  S  V  K  L  W  N  I  N  Q  :  G  V  S  V  G  T  I  K </first_frame>
            <second_frame>  V  V  A  R  I  A  Y  P  L  P  S  Q  T  P  L  G  G  I  S  L   : V  T  C  *  K  A  T  S  L  M  L  Q  E  M  S  L  K  N  V  K  Q  Q  *  N  L  E  K  K  *  R  S  K  S  Y  C  W  N  S  F  C  *  F  N  N  E  S  W  R  L  Y  T  T  Y  V  R  L  Y  L  F  Y  H  L  T  *  K  R  S  Q  R  C  R  R  P  L  E  S  K  G  V  Q  I  R  S  Q  *  G  I  *  V  Q  E  R  *  I  L  L  K  M  M  M  L  G  A  L  D  L  E  R  D  L  S  Q  A  F  L  Y  T  Q  L  R  N  T  M  A  I  Q  M  S  L  R  N  M  S  K  T  K  G  A  F  W  Q  K  I  P  G  *  *  R  T  S  R  N  W  R  W  L  I  S  *  Q  D  V  G  L  S  N  R  Q  A  N  H  Y  I  D  I  L  R  Q  V  R  I  V  E  L  Q  F  W  H  L  K  E  V  Q  *  V  I  W  H  Q  K  R  G  A  M  R  I  D  R  V  D  Q  S  V  H  S  W  R  D  C  A  S  I  Y  L  I  A  S  W  K  *  R  L  T  *  S  K  G  I  F  *  I  L  P  I  L  Y  V  L  *  A  L  I  V  M  V  N  I  L  Q  L  L  V  *  I  R  R  S  K  F  L  N  I  I  Q  L  L  M  R  T  A  I  S  T  I  Q  L  L  K  W  L  V  D  L  S  *  A  A  Y  V  G  M  A  I  S  K  A  R  S  R  Q  V  T  L  K  V  W  C  R :   Y  G  M  S  Q  E  V  R  F  S  W  K  *  E  N  M  K  G  V  S  G  L  L  T  F  L  Q  Q  I  Q  P  C  W  L  A  G  V  M  M  V  L  S  N  S  G  I  S  I  R :   E  *  V  L  E  P  S   </second_frame>
            <third_frame>   *  W  Q  G  L  H  T  L  Y  H  P  R  P  H  L  V  G  F  H  W  :  *  L  A  R  K  R  L  P  *  C  S  K  R  *  V  *  R  T  *  S  S  N  R  T  *  R  R  N  R  G  A  R  V  I  A  G  I  P  F  A  N  S  T  T  K  A  G  G  F  T  Q  L  T  *  D  C  I  F  F  I  I  *  H  R  R  G  L  K  D  A  E  D  P  *  S  R  K  G  F  K  S  G  A  S  K  G  F  R  F  R  K  D  K  Y  C  *  R  *  *  C  W  V  L  W  I  *  K  E  I  *  A  R  P  F  Y  T  H  S  *  G  I  Q  W  Q  S  R  *  V  *  E  T  C  R  K  Q  R  E  H  S  G  K  K  F  P  V  D  E  E  L  Q  E  I  G  G  G  L  F  H  D  K  T  *  G  Y  Q  T  D  R  Q  I  T  I  *  T  F  S  G  K  Y  G  L  *  N  C  S  S  G  T  *  K  K  F  N  E  *  F  G  I  K  R  G  V  Q  *  G  *  T  E  W  I  N  Q  F  I  P  G  G  T  V  Q  V  S  I  L  *  Q  A  G  S  E  G  *  L  E  A  R  G  S  S  K  F  F  Q  S  C  M  C  S  R  L  *  S  *  W  *  I  F  C  N  C  W  C  K  *  E  D  Q  S  F  *  I  *  F  N  C  *  *  G  P  R  Y  P  L  S  S  C  *  N  G  *  *  I  *  A  K  Q  H  M  L  E  W  L  Y  Q  K  P  D  R  V  K  *  L  *  R  C  G  A   : G  M  G  C  H  K  K  S  G  F  H  G  N  E  R  T  *  K  A  C  L  V  C  *  L  F  C  S  R  S  N  H  V  G  *  R  E  *  *  W  F  C  Q  T  L  E  Y  Q  S   : G  S  K  C  W  N  H  Q  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0046G04.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9417" stop="9478"/>
                    <exon start="9816" stop="10767"/>
                    <exon start="10841" stop="10987"/>
                    <exon start="11117" stop="11140"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1185</number_coding_nucleotides>
                  <number_encoded_amino_acids>395</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GSGKDCIPSTIPDPTWWDFTGDLLESDFLNAPRDEFEEREAAIELREEIEEQELLLEFLLLIQQRKLEALHNLREIVSFLSSDIEEVSKMQKTLRVERGSNQEPVRDLGSGKINIAEDDDAGCFGSRKRFKPGLSIHTAEEYNGNPDESEKHVENKGSILAKNSRLMKNFKKLEVAYFMTRRRVIKPTGKSLYRHSQASTDCRTAVLAPERSSMSNLASKEGCNEDRQSGSISSFLEGLCKYLSYSKLEVKADLKQGDLLNSSNLVCALGFDRDGEYFATAGVNKKIKVFEYNSIVNEDRDIHYPVVEMASRSKLSSICWNGYIKSQIASSNFEGVVQVWDVTRSQVFMEMREHERRVWSVDFSAADPTMLASGSDDGSVKLWNINQGVSVGTIK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="16922" PGL_stop="14777"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="16922" e_stop="16608"/>
            <exon e_start="16496" e_stop="16421"/>
            <exon e_start="16326" e_stop="16211"/>
            <exon e_start="15374" e_stop="14777"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.938" acc_prob="0.554" e_score="0.997"/>
          <exon-intron don_prob="0.991" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.924" e_score="1.000"/>
          <exon-only e_score="0.970"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="16922" e_stop="16608" e_length="315"/>
          </exon>
          <intron i_serial="1" don_prob="0.938" acc_prob="0.554">
            <gDNA_intron_boundary i_start="16607" i_stop="16497" i_length="111"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="16496" e_stop="16421" e_length="76"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.999">
            <gDNA_intron_boundary i_start="16420" i_stop="16327" i_length="94"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="16326" e_stop="16211" e_length="116"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.924">
            <gDNA_intron_boundary i_start="16210" i_stop="15375" i_length="836"/>
          </intron>
          <exon e_serial="4" e_score="0.970">
            <gDNA_exon_boundary e_start="15374" e_stop="14777" e_length="598"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16922" stop="16608"/>
              <exon start="16496" stop="16421"/>
              <exon start="16326" stop="16211"/>
              <exon start="15374" stop="14967"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707842" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16796" stop="16608"/>
              <exon start="16496" stop="16421"/>
              <exon start="16326" stop="16211"/>
              <exon start="15374" stop="15253"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E709005" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16432" stop="16421"/>
              <exon start="16326" stop="16211"/>
              <exon start="15374" stop="14777"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E416800" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAAAGAATGATCTAGAAAAGCTTTGGAGAACGTTGCAAGCATTGTATCATCCACGGAACTATTATGTTGTTCATCTGGACCTAGAATCATCTGTGCAGGAGAGGTTAGAGCTTGCTTCCAGAGTGGAGAAAGAACCCATTTTTGCACAGGTTGGGAATGTGCATATGATCACCAAAGCAAACATGGTGACCTACCGTGGACCTACCATGGTTGCTAACACTCTTCATGCCTGCGCGATTCTCCTGAAGAAGTATTCGGACTGGGATTGGTTTATTAACCTGAGTGCTTCTGATTATCCACTGGTGACTCAAGATG : ATTTACTCTATACTTTTTCCGGTTTAAAACGAGAGTACAATTTCATTGAGTACAGTAGCCGGCTGGGTTGGAAAGA : GGGTCAAAGGGCAATGCCGCTTATTATAGACCCTGGTCTCTATAAGACAACCAAGTCTGACATATTTTGGGTCTCGCCGAAGAGAGCTCTTCCCACAGCCTTTAAACTCTTTACAG : GTTCAGCGTGGATGATCCTCTCTCGTGCTTTTGTGGAGTACTGCATATGGGGTTGGGATAATCTTCCCAGAACCTTACTCATGTACTACACAAATTTTGTCTCCTCTCCTGAAGGCTACTTTCAGACTGTAGCTTGCAATGCCCCAGAATTTGCTACAACTGTTATTAACCACGACTTGCACTTCATTTCTTGGGATCGCCCTCCAAAACAACATCCACACAATCTCAACATAAATGACACATCAAGAATGATTGCAAGTGGTGCTGCATTTGCTCGCAAGTTCAAGCGAGATGATCCTGTTCTAGACAAGATTGATAAAGAACTCCTTCGTCGAAAAAATGGTAGCTTTACCCCAGGGGGTTGGTGTACCAGCAGACCTTCTTGTTTAAAGGTTGGAAATCCAGCAAAGCTTAAACCAGGTCCAGGGGCTAAAAGGCTTCGGCGTCTTATTGGTAAACTAGTTTTGTCAACTAATACTACTAGGCAACAGCAGTGTAAGTAGCTATACTTTCCCATGAAAAAAGGGAGGGGATTAGAGAGTTCCATTTATAGATCCAGAGAATAATATTGACATCAGATTATTTTGTAATATAAAGA</gDNA_template>
            <first_frame> Q  R  M  I  *  K  S  F  G  E  R  C  K  H  C  I  I  H  G  T  I  M  L  F  I  W  T  *  N  H  L  C  R  R  G  *  S  L  L  P  E  W  R  K  N  P  F  L  H  R  L  G  M  C  I  *  S  P  K  Q  T  W  *  P  T  V  D  L  P  W  L  L  T  L  F  M  P  A  R  F  S  *  R  S  I  R  T  G  I  G  L  L  T  *  V  L  L  I  I  H  W  *  L  K  M  :  I  Y  S  I  L  F  P  V  *  N  E  S  T  I  S  L  S  T  V  A  G  W  V  G  K   : R  V  K  G  Q  C  R  L  L  *  T  L  V  S  I  R  Q  P  S  L  T  Y  F  G  S  R  R  R  E  L  F  P  Q  P  L  N  S  L  Q  :  V  Q  R  G  *  S  S  L  V  L  L  W  S  T  A  Y  G  V  G  I  I  F  P  E  P  Y  S  C  T  T  Q  I  L  S  P  L  L  K  A  T  F  R  L  *  L  A  M  P  Q  N  L  L  Q  L  L  L  T  T  T  C  T  S  F  L  G  I  A  L  Q  N  N  I  H  T  I  S  T  *  M  T  H  Q  E  *  L  Q  V  V  L  H  L  L  A  S  S  S  E  M  I  L  F  *  T  R  L  I  K  N  S  F  V  E  K  M  V  A  L  P  Q  G  V  G  V  P  A  D  L  L  V  *  R  L  E  I  Q  Q  S  L  N  Q  V  Q  G  L  K  G  F  G  V  L  L  V  N  *  F  C  Q  L  I  L  L  G  N  S  S  V  S  S  Y  T  F  P  *  K  K  G  G  D  *  R  V  P  F  I  D  P  E  N  N  I  D  I  R  L  F  C  N  I  K  </first_frame>
            <second_frame>  K  E  *  S  R  K  A  L  E  N  V  A  S  I  V  S  S  T  E  L  L  C  C  S  S  G  P  R  I  I  C  A  G  E  V  R  A  C  F  Q  S  G  E  R  T  H  F  C  T  G  W  E  C  A  Y  D  H  Q  S  K  H  G  D  L  P  W  T  Y  H  G  C  *  H  S  S  C  L  R  D  S  P  E  E  V  F  G  L  G  L  V  Y  *  P  E  C  F  *  L  S  T  G  D  S  R  * :   F  T  L  Y  F  F  R  F  K  T  R  V  Q  F  H  *  V  Q  *  P  A  G  L  E  R  :  G  S  K  G  N  A  A  Y  Y  R  P  W  S  L  *  D  N  Q  V  *  H  I  L  G  L  A  E  E  S  S  S  H  S  L  *  T  L  Y  R :   F  S  V  D  D  P  L  S  C  F  C  G  V  L  H  M  G  L  G  *  S  S  Q  N  L  T  H  V  L  H  K  F  C  L  L  S  *  R  L  L  S  D  C  S  L  Q  C  P  R  I  C  Y  N  C  Y  *  P  R  L  A  L  H  F  L  G  S  P  S  K  T  T  S  T  Q  S  Q  H  K  *  H  I  K  N  D  C  K  W  C  C  I  C  S  Q  V  Q  A  R  *  S  C  S  R  Q  D  *  *  R  T  P  S  S  K  K  W  *  L  Y  P  R  G  L  V  Y  Q  Q  T  F  L  F  K  G  W  K  S  S  K  A  *  T  R  S  R  G  *  K  A  S  A  S  Y  W  *  T  S  F  V  N  *  Y  Y  *  A  T  A  V  *  V  A  I  L  S  H  E  K  R  E  G  I  R  E  F  H  L  *  I  Q  R  I  I  L  T  S  D  Y  F  V  I  *  R </second_frame>
            <third_frame>   K  N  D  L  E  K  L  W  R  T  L  Q  A  L  Y  H  P  R  N  Y  Y  V  V  H  L  D  L  E  S  S  V  Q  E  R  L  E  L  A  S  R  V  E  K  E  P  I  F  A  Q  V  G  N  V  H  M  I  T  K  A  N  M  V  T  Y  R  G  P  T  M  V  A  N  T  L  H  A  C  A  I  L  L  K  K  Y  S  D  W  D  W  F  I  N  L  S  A  S  D  Y  P  L  V  T  Q  D   : D  L  L  Y  T  F  S  G  L  K  R  E  Y  N  F  I  E  Y  S  S  R  L  G  W  K  E :   G  Q  R  A  M  P  L  I  I  D  P  G  L  Y  K  T  T  K  S  D  I  F  W  V  S  P  K  R  A  L  P  T  A  F  K  L  F  T   : G  S  A  W  M  I  L  S  R  A  F  V  E  Y  C  I  W  G  W  D  N  L  P  R  T  L  L  M  Y  Y  T  N  F  V  S  S  P  E  G  Y  F  Q  T  V  A  C  N  A  P  E  F  A  T  T  V  I  N  H  D  L  H  F  I  S  W  D  R  P  P  K  Q  H  P  H  N  L  N  I  N  D  T  S  R  M  I  A  S  G  A  A  F  A  R  K  F  K  R  D  D  P  V  L  D  K  I  D  K  E  L  L  R  R  K  N  G  S  F  T  P  G  G  W  C  T  S  R  P  S  C  L  K  V  G  N  P  A  K  L  K  P  G  P  G  A  K  R  L  R  R  L  I  G  K  L  V  L  S  T  N  T  T  R  Q  Q  Q  C  K  *  L  Y  F  P  M  K  K  G  R  G  L  E  S  S  I  Y  R  S  R  E  *  Y  *  H  Q  I  I  L  *  Y  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0046G04.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16920" stop="16608"/>
                    <exon start="16496" stop="16421"/>
                    <exon start="16326" stop="16211"/>
                    <exon start="15374" stop="14872"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1005</number_coding_nucleotides>
                  <number_encoded_amino_acids>335</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KNDLEKLWRTLQALYHPRNYYVVHLDLESSVQERLELASRVEKEPIFAQVGNVHMITKANMVTYRGPTMVANTLHACAILLKKYSDWDWFINLSASDYPLVTQDDLLYTFSGLKREYNFIEYSSRLGWKEGQRAMPLIIDPGLYKTTKSDIFWVSPKRALPTAFKLFTGSAWMILSRAFVEYCIWGWDNLPRTLLMYYTNFVSSPEGYFQTVACNAPEFATTVINHDLHFISWDRPPKQHPHNLNINDTSRMIASGAAFARKFKRDDPVLDKIDKELLRRKNGSFTPGGWCTSRPSCLKVGNPAKLKPGPGAKRLRRLIGKLVLSTNTTRQQQCK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="26824" PGL_stop="34460"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="26824" e_stop="27012"/>
            <exon e_start="28320" e_stop="28717"/>
            <exon e_start="29053" e_stop="29247"/>
            <exon e_start="29370" e_stop="29549"/>
            <exon e_start="29676" e_stop="29870"/>
            <exon e_start="30694" e_stop="30792"/>
            <exon e_start="30868" e_stop="31401"/>
            <exon e_start="31575" e_stop="32167"/>
            <exon e_start="33802" e_stop="33812"/>
            <exon e_start="34408" e_stop="34453"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.932" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.773" acc_prob="0.475" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.820" e_score="0.983"/>
          <exon-intron don_prob="0.769" acc_prob="0.879" e_score="0.545"/>
          <exon-only e_score="0.609"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="26824" e_stop="27012" e_length="189"/>
          </exon>
          <intron i_serial="1" don_prob="0.932" acc_prob="0.989">
            <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="28320" e_stop="28717" e_length="398"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.998">
            <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="29053" e_stop="29247" e_length="195"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.991">
            <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="29370" e_stop="29549" e_length="180"/>
          </exon>
          <intron i_serial="4" don_prob="0.985" acc_prob="0.997">
            <gDNA_intron_boundary i_start="29550" i_stop="29675" i_length="126"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="29676" e_stop="29870" e_length="195"/>
          </exon>
          <intron i_serial="5" don_prob="0.773" acc_prob="0.475">
            <gDNA_intron_boundary i_start="29871" i_stop="30693" i_length="823"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="30694" e_stop="30792" e_length="99"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.967">
            <gDNA_intron_boundary i_start="30793" i_stop="30867" i_length="75"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="30868" e_stop="31401" e_length="534"/>
          </exon>
          <intron i_serial="7" don_prob="0.998" acc_prob="0.981">
            <gDNA_intron_boundary i_start="31402" i_stop="31574" i_length="173"/>
          </intron>
          <exon e_serial="8" e_score="0.983">
            <gDNA_exon_boundary e_start="31575" e_stop="32167" e_length="593"/>
          </exon>
          <intron i_serial="8" don_prob="0.000" acc_prob="0.820">
            <gDNA_intron_boundary i_start="32168" i_stop="33801" i_length="1634"/>
          </intron>
          <exon e_serial="9" e_score="0.545">
            <gDNA_exon_boundary e_start="33802" e_stop="33812" e_length="11"/>
          </exon>
          <intron i_serial="9" don_prob="0.769" acc_prob="0.879">
            <gDNA_intron_boundary i_start="33813" i_stop="34407" i_length="595"/>
          </intron>
          <exon e_serial="10" e_score="0.609">
            <gDNA_exon_boundary e_start="34408" e_stop="34453" e_length="46"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26824" stop="27012"/>
              <exon start="28320" stop="28595"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E478029" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26854" stop="27012"/>
              <exon start="28320" stop="28717"/>
              <exon start="29053" stop="29074"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247537" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26866" stop="27012"/>
              <exon start="28320" stop="28717"/>
              <exon start="29053" stop="29247"/>
              <exon start="29370" stop="29407"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720534" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26868" stop="27012"/>
              <exon start="28320" stop="28717"/>
              <exon start="29053" stop="29247"/>
              <exon start="29370" stop="29398"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E725149" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26868" stop="27012"/>
              <exon start="28320" stop="28717"/>
              <exon start="29053" stop="29090"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E579484" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26871" stop="27012"/>
              <exon start="28320" stop="28717"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252774" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26872" stop="27012"/>
              <exon start="28320" stop="28439"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E442778" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26878" stop="27012"/>
              <exon start="28320" stop="28504"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297039" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26879" stop="27012"/>
              <exon start="28320" stop="28717"/>
              <exon start="29053" stop="29247"/>
              <exon start="29370" stop="29446"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E585830" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26880" stop="27012"/>
              <exon start="28320" stop="28717"/>
              <exon start="29053" stop="29247"/>
              <exon start="29370" stop="29423"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589144" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26880" stop="27012"/>
              <exon start="28320" stop="28717"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E583472" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26880" stop="27012"/>
              <exon start="28320" stop="28597"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E581815" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26881" stop="27012"/>
              <exon start="28320" stop="28655"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204432" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26881" stop="27012"/>
              <exon start="28320" stop="28633"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333133" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26881" stop="27012"/>
              <exon start="28320" stop="28503"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338151" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26882" stop="27012"/>
              <exon start="28320" stop="28717"/>
              <exon start="29053" stop="29247"/>
              <exon start="29370" stop="29415"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E211125" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26882" stop="27012"/>
              <exon start="28320" stop="28717"/>
              <exon start="29053" stop="29091"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E484427" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26883" stop="27012"/>
              <exon start="28320" stop="28545"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277855" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26886" stop="27012"/>
              <exon start="28320" stop="28717"/>
              <exon start="29053" stop="29247"/>
              <exon start="29370" stop="29488"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707903" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26886" stop="27012"/>
              <exon start="28320" stop="28717"/>
              <exon start="29053" stop="29244"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E603662" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26886" stop="27012"/>
              <exon start="28320" stop="28717"/>
              <exon start="29053" stop="29157"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E419790" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26886" stop="27012"/>
              <exon start="28320" stop="28717"/>
              <exon start="29053" stop="29091"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203231" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26886" stop="27012"/>
              <exon start="28320" stop="28705"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E478465" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26886" stop="27012"/>
              <exon start="28320" stop="28540"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E444893" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26887" stop="27012"/>
              <exon start="28320" stop="28717"/>
              <exon start="29053" stop="29247"/>
              <exon start="29370" stop="29489"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704502" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26887" stop="27012"/>
              <exon start="28320" stop="28717"/>
              <exon start="29053" stop="29227"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704719" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26887" stop="27012"/>
              <exon start="28320" stop="28717"/>
              <exon start="29053" stop="29170"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327940" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26887" stop="27012"/>
              <exon start="28320" stop="28717"/>
              <exon start="29053" stop="29158"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314173" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26887" stop="27012"/>
              <exon start="28320" stop="28717"/>
              <exon start="29053" stop="29133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324814" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26887" stop="27012"/>
              <exon start="28320" stop="28673"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309881" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26887" stop="27012"/>
              <exon start="28320" stop="28391"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482336" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26889" stop="27012"/>
              <exon start="28320" stop="28717"/>
              <exon start="29053" stop="29247"/>
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          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31187" stop="31401"/>
              <exon start="31575" stop="32081"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E601613" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31196" stop="31401"/>
              <exon start="31575" stop="31973"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268299" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31217" stop="31401"/>
              <exon start="31575" stop="32115"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E585237" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31294" stop="31401"/>
              <exon start="31575" stop="32071"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610472" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31309" stop="31401"/>
              <exon start="31575" stop="31905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E580576" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31331" stop="31401"/>
              <exon start="31575" stop="32117"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291534" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31656" stop="32167"/>
              <exon start="33802" stop="33812"/>
              <exon start="34408" stop="34453"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E418897" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTTTCAAGATTTTATAGTAGCAGAGAGAGAAAAAACTGAAGAGATCTGAAGAGGGGTCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCA : GATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG : GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT : ATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAA : CTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGG : AATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAG : GTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAG : GAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGCAGGTGGGGAGAGACAAAACAAAAAACAAAAACTTTGTTTTTAGTGTTTTAATTTTTTGTTTACAAATACTGCAATAGCAAGTACTGTTTAGTTTGATCATAACAATATTTCTTTTTCTTGCATCCTATATAGTTTAGGATGGAAAACTCATAAATGTTTTGCTGGTAGATGTGCGGCCTATCTTGAGATTACTTACTGGAGAGACAGTCTACATGTTTTTCTTTTGTTGCTGTAGTTGATATTATATTGACATTTTGCTTAATC : AGCTCGAACTT : GTACAAAAATTAGTCCTCCTCCACTATGCAAAAAAAAAAAAAAAAA</gDNA_template>
            <first_frame> I  F  K  I  L  *  *  Q  R  E  K  K  L  K  R  S  E  E  G  S  D  *  F  L  L  S  K  N  L  S  F  E  R  P  S  L  I  F  V  K  K  G  I  I  E  G  G  V  T  V  F  S  L  N  L  C  I  *  F  L  L  Y  S  :  D  Q  G  L  L  G  L  Y  F  I  E  I  W  V  *  R  W  K  L  S  *  F  M  F  Q  L  K  L  E  L  N  R  S  I  F  *  K  K  M  E  S  R  I  M  F  Q  G  L  R  S  Q  *  N  S  A  L  M  G  L  K  N  L  R  R  K  *  V  E  F  L  *  A  M  F  Q  R  M  R  L  R  I  G  L  N  L  S  R  S  I  R  S  I  L  L  N  F  G  D  L  T  T  L  N  *  K  P  E  L  N  W  L  K  K  S  Y  R  K  R  T  K  L  D  L  R  S  L  K  N  *  R  P  K  G :   L  K  N  Q  F  S  L  N  K  G  K  P  S  V  L  R  I  R  N  F  G  V  L  L  M  V  R  *  R  K  W  H  L  C  M  R  L  W  A  S  S  A  V  L  G  M  Q  A  E  R  G  V  L  Q  C  V  H  L  R  R  S  S  I  I  L :   S  R  V  C  N  T  A  F  S  M  K  A  F  L  *  T  K  R  S  K  F  F  G  K  S  N  N  L  K  E  Q  G  K  M  L  K  R  L  L  L  Q  E  H  R  F  M  R  R  W  V  K  K  N  Q  S  R  V  R  S  N :   L  *  M  L  A  W  M  E  F  V  R  D  N  R  K  S  R  A  G  L  R  *  *  M  I  R  L  M  P  *  T  N  R  S  V  Y  W  M  R  N  *  R  T  L  W  R  R  G  T  R  L  M  N  I  F  W  N  *  E  N  S  V  K  K  G :   I  L  L  S  I  K  T  P  T  C  C  T  K  *  N  N  L  L  T  K  R  M  L  E  P  L  K  S  F  Q  L  Q  R :   S  T  S  S  F  L  F  G  V  V  V  S  L  L  E  M  T  M  R  G  D  S  C  S  R  L  I  L  G  S  *  A  G  T  A  G  *  G  I  L  M  K  S  H  W  C  Y  Q  K  H  L  L  S  P  V  L  K  F  Q  Q  E  L  M  Q  N  P  L  R  K  I  M  H  P  L  M  L  L  R  F  R  K  N  S  K  R  L  A  A  S  S  *  M  M  L  V  V  K  T  Q  K  A  Q  R  K  K  L  L  L  M  M  M  R  K  S  M  V  W  T  Y  T  R  I  L  S  P  R  K  S  K  L  M  R  Q  H  *  R  R  *  R  K  R  R  R  W  Q  K  I  N  R  L  W  R  G  S  V  S  W  P  R  K  Q  L  Q  K  L  Q  R  K  L  S  *  K  L  K  R  S  S  R :   N  V  R  R  K  Q  R  R  R  A  E  L  L  L  L  V  R  N  Q  S  R  N  Q  L  K  H  P  R  K  L  L  R  K  K  M  Q  R  R  L  L  K  Q  P  L  H  P  R  S  R  H  G  K  R  T  P  S  G  T  E  Q  H  V  Q  E  A  P  S  F  P  K  L  Y  *  S  A  R  K  Q  Q  T  T  G  Y  G  Q  L  L  L  L  H  S  R  F  W  Y  F  *  S  S  D  T  C  I  F  K  S  R  K  R  Q  V  G  R  D  K  T  K  N  K  N  F  V  F  S  V  L  I  F  C  L  Q  I  L  Q  *  Q  V  L  F  S  L  I  I  T  I  F  L  F  L  A  S  Y  I  V  *  D  G  K  L  I  N  V  L  L  V  D  V  R  P  I  L  R  L  L  T  G  E  T  V  Y  M  F  F  F  C  C  C  S  *  Y  Y  I  D  I  L  L  N   : Q  L  E  L  :  V  Q  K  L  V  L  L  H  Y  A  K  K  K  K  K  </first_frame>
            <second_frame>  F  S  R  F  Y  S  S  R  E  R  K  N  *  R  D  L  K  R  G  L  T  S  F  F  S  Q  K  I  S  L  L  N  G  P  P  *  F  L  S  K  R  V  *  *  R  E  E  *  Q  S  F  L  *  I  S  A  F  S  F  C  C  T  Q :   I  R  D  F  S  V  C  I  S  L  K  Y  G  C  R  G  G  S  *  V  S  S  C  S  S  *  S  W  N  *  T  D  Q  S  S  E  R  K  W  K  A  E  S  C  F  R  D  Y  G  A  N  K  I  R  L  S  W  D  *  R  T  *  G  G  N  K  *  N  S  C  E  Q  C  S  K  G  C  G  *  G  L  A  *  T  *  A  G  P  F  V  L  Y  C  *  I  S  E  I  *  R  P  *  T  E  S  Q  N  *  T  G  *  K  R  A  T  E  K  E  P  S  *  I  S  D  H  *  K  I  E  G  Q  K   : G  *  K  I  N  F  H  *  T  K  E  S  P  Q  C  *  E  *  G  I  S  E  C  Y  *  W  *  D  K  G  N  G  T  S  A  *  G  F  G  P  A  P  R  F  *  E  C  R  P  R  E  G  S  Y  S  V  F  I  *  G  G  A  Q  S  S   : Y  Q  G  S  A  I  P  H  S  A  *  K  H  S  S  E  R  R  E  A  N  S  S  G  N  Q  T  T  *  R  N  K  G  R  C  *  K  G  C  C  C  K  S  T  D  S  *  D  D  G  *  K  R  I  N  P  E  S  G  Q   : T  Y  E  C  W  L  G  W  S  S  *  G  T  T  G  S  Q  G  Q  A  *  D  N  R  *  S  D  *  C  H  K  Q  T  D  R  Y  I  G  *  G  I  E  G  R  C  G  E  E  G  Q  D  L  *  T  Y  S  G  I  E  K  T  A  *  R  R   : E  F  F  F  L  S  K  L  Q  R  V  A  Q  S  E  T  T  C  *  P  K  G  C  W  S  P  *  R  A  F  S  Y  R   : G  R  Q  V  H  F  S  L  V  W  *  *  V  F  *  R  *  L  *  E  E  T  L  A  V  A  *  Y  *  A  A  E  Q  G  R  Q  D  E  E  S  *  *  K  A  T  G  V  T  R  S  T  Y  C  L  P  C  *  S  S  S  K  S  *  C  K  T  R  *  G  R  S  C  T  R  *  C  C  S  D  S  E  R  T  A  R  G  *  R  Q  A  A  E  *  C  S  W  *  K  L  K  K  H  R  E  K  S  C  C  *  *  *  *  G  N  L  W  F  G  P  T  Q  G  F  *  A  Q  E  N  R  N  *  *  G  N  T  E  G  D  E  E  R  G  G  D  G  K  K  *  T  G  Y  G  E  E  A  *  V  G  R  E  S  S  C  K  S  C  K  E  S  S  A  R  S  *  K  E  A  Q   : G  T  *  E  E  S  K  E  E  E  R  S  F  C  C  W  S  G  T  N  R  G  T  N  *  N  T  R  G  N  C  *  G  R  K  C  R  G  D  C  *  N  S  R  C  T  Q  G  Q  G  T  E  R  E  H  H  Q  A  Q  S  N  T  C  K  R  L  R  A  S  Q  S  Y  T  K  A  Q  E  S  N  K  L  L  A  M  G  S  C  S  C  C  T  R  D  S  G  T  S  S  H  R  I  H  V  S  S  K  V  E  R  G  R  W  G  E  T  K  Q  K  T  K  T  L  F  L  V  F  *  F  F  V  Y  K  Y  C  N  S  K  Y  C  L  V  *  S  *  Q  Y  F  F  F  L  H  P  I  *  F  R  M  E  N  S  *  M  F  C  W  *  M  C  G  L  S  *  D  Y  L  L  E  R  Q  S  T  C  F  S  F  V  A  V  V  D  I  I  L  T  F  C  L  I  :  S  S  N  L :   Y  K  N  *  S  S  S  T  M  Q  K  K  K  K  K </second_frame>
            <third_frame>   F  Q  D  F  I  V  A  E  R  E  K  T  E  E  I  *  R  G  V  *  L  V  S  S  L  K  K  S  L  F  *  T  A  L  P  N  F  C  Q  K  G  Y  N  R  G  R  S  N  S  L  F  S  K  S  L  H  L  V  F  A  V  L   : R  S  G  T  S  R  F  V  F  H  *  N  M  G  V  E  V  E  A  K  L  V  H  V  P  V  E  A  G  T  E  Q  I  N  L  L  K  E  N  G  K  P  N  H  V  S  G  I  T  E  P  I  K  F  G  S  H  G  T  E  E  P  K  E  E  I  S  R  I  P  V  S  N  V  P  K  D  A  V  E  D  W  P  E  P  K  Q  V  H  S  F  Y  T  V  K  F  R  R  F  D  D  P  K  L  K  A  R  I  E  L  A  E  K  E  L  Q  K  K  N  Q  A  R  S  Q  I  I  E  K  L  K  A  K  R  :  A  E  K  S  I  F  I  E  Q  R  K  A  L  S  A  E  N  K  E  F  R  S  A  I  D  G  K  I  K  E  M  A  P  L  H  E  A  L  G  Q  L  R  G  S  R  N  A  G  R  E  R  G  P  T  V  C  S  S  E  E  E  L  N  H  L  :  I  K  G  L  Q  Y  R  I  Q  H  E  S  I  P  L  N  E  E  K  Q  I  L  R  E  I  K  Q  L  E  G  T  R  E  D  V  K  K  V  A  A  A  R  A  Q  I  H  E  T  M  G  E  K  E  S  I  Q  S  Q  V  K  :  L  M  N  V  G  L  D  G  V  R  K  G  Q  Q  E  V  K  G  R  L  K  I  I  D  D  Q  I  D  A  I  N  K  Q  I  G  I  L  D  E  E  L  K  D  V  V  E  K  R  D  K  T  Y  E  H  I  L  E  L  R  K  Q  R  E  E  G  :  N  S  S  F  Y  Q  N  S  N  V  L  H  K  V  K  Q  L  A  D  Q  K  D  V  G  A  L  K  E  L  S  V  T  E  :  V  D  K  F  I  S  L  W  C  G  S  K  S  F  R  D  D  Y  E  R  R  L  L  Q  S  L  D  I  R  Q  L  S  R  D  G  R  M  R  N  P  D  E  K  P  L  V  L  P  E  A  P  T  V  S  R  A  E  V  P  A  R  A  N  A  K  P  V  K  E  D  H  A  P  V  D  A  A  P  I  Q  K  E  Q  Q  E  V  S  G  K  Q  L  N  D  A  R  G  K  N  S  K  S  T  E  K  K  A  V  V  D  D  D  E  E  I  Y  G  L  D  L  H  K  D  S  K  P  K  K  I  E  I  D  E  A  T  L  K  E  M  K  K  E  E  E  M  A  K  N  K  Q  A  M  E  R  K  R  K  L  A  E  K  A  A  A  K  A  A  K  K  A  Q  L  E  A  E  K  K  L  K  :  E  R  E  K  K  A  K  K  K  S  G  A  S  A  A  G  Q  E  P  I  E  E  P  T  E  T  P  E  E  I  A  E  E  E  N  A  E  E  T  V  E  T  A  V  A  P  K  V  K  A  R  K  E  N  T  I  R  H  R  A  T  R  A  R  G  S  E  L  P  K  A  I  L  K  R  K  K  A  T  N  Y  W  L  W  A  A  A  P  A  A  L  A  I  L  V  L  L  V  I  G  Y  M  Y  L  Q  K  *  K  E  A  G  G  E  R  Q  N  K  K  Q  K  L  C  F  *  C  F  N  F  L  F  T  N  T  A  I  A  S  T  V  *  F  D  H  N  N  I  S  F  S  C  I  L  Y  S  L  G  W  K  T  H  K  C  F  A  G  R  C  A  A  Y  L  E  I  T  Y  W  R  D  S  L  H  V  F  L  L  L  L  *  L  I  L  Y  *  H  F  A  *  S :   A  R  T   : C  T  K  I  S  P  P  P  L  C  K  K  K  K  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0046G04.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28352" stop="28717"/>
                    <exon start="29053" stop="29247"/>
                    <exon start="29370" stop="29549"/>
                    <exon start="29676" stop="29870"/>
                    <exon start="30694" stop="30792"/>
                    <exon start="30868" stop="31401"/>
                    <exon start="31575" stop="31895"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1887</number_coding_nucleotides>
                  <number_encoded_amino_acids>629</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NMGVEVEAKLVHVPVEAGTEQINLLKENGKPNHVSGITEPIKFGSHGTEEPKEEISRIPVSNVPKDAVEDWPEPKQVHSFYTVKFRRFDDPKLKARIELAEKELQKKNQARSQIIEKLKAKRAEKSIFIEQRKALSAENKEFRSAIDGKIKEMAPLHEALGQLRGSRNAGRERGPTVCSSEEELNHLIKGLQYRIQHESIPLNEEKQILREIKQLEGTREDVKKVAAARAQIHETMGEKESIQSQVKLMNVGLDGVRKGQQEVKGRLKIIDDQIDAINKQIGILDEELKDVVEKRDKTYEHILELRKQREEGNSSFYQNSNVLHKVKQLADQKDVGALKELSVTEVDKFISLWCGSKSFRDDYERRLLQSLDIRQLSRDGRMRNPDEKPLVLPEAPTVSRAEVPARANAKPVKEDHAPVDAAPIQKEQQEVSGKQLNDARGKNSKSTEKKAVVDDDEEIYGLDLHKDSKPKKIEIDEATLKEMKKEEEMAKNKQAMERKRKLAEKAAAKAAKKAQLEAEKKLKEREKKAKKKSGASAAGQEPIEEPTETPEEIAEEENAEETVETAVAPKVKARKENTIRHRATRARGSELPKAILKRKKATNYWLWAAAPAALAILVLLVIGYMYLQK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="26824" e_stop="27012"/>
            <exon e_start="28320" e_stop="28717"/>
            <exon e_start="29053" e_stop="29247"/>
            <exon e_start="29370" e_stop="29549"/>
            <exon e_start="29676" e_stop="29870"/>
            <exon e_start="30694" e_stop="30792"/>
            <exon e_start="30868" e_stop="31401"/>
            <exon e_start="31575" e_stop="32109"/>
            <exon e_start="34439" e_stop="34460"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.932" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.773" acc_prob="0.475" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.988"/>
          <exon-only e_score="0.955"/>
        </SCR_line>
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              <exon start="29676" stop="29870"/>
              <exon start="30694" stop="30792"/>
              <exon start="30868" stop="31013"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E478689" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29203" stop="29247"/>
              <exon start="29370" stop="29549"/>
              <exon start="29676" stop="29870"/>
              <exon start="30694" stop="30792"/>
              <exon start="30868" stop="30884"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E450805" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29207" stop="29247"/>
              <exon start="29370" stop="29549"/>
              <exon start="29676" stop="29870"/>
              <exon start="30694" stop="30742"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476914" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29226" stop="29247"/>
              <exon start="29370" stop="29549"/>
              <exon start="29676" stop="29870"/>
              <exon start="30694" stop="30792"/>
              <exon start="30868" stop="31097"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331902" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29239" stop="29247"/>
              <exon start="29370" stop="29549"/>
              <exon start="29676" stop="29699"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E584113" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29243" stop="29247"/>
              <exon start="29370" stop="29549"/>
              <exon start="29676" stop="29870"/>
              <exon start="30694" stop="30792"/>
              <exon start="30868" stop="31105"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E478200" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29419" stop="29549"/>
              <exon start="29676" stop="29870"/>
              <exon start="30694" stop="30792"/>
              <exon start="30868" stop="31160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E457026" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29428" stop="29549"/>
              <exon start="29676" stop="29870"/>
              <exon start="30694" stop="30792"/>
              <exon start="30868" stop="31097"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E411748" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29428" stop="29549"/>
              <exon start="29676" stop="29870"/>
              <exon start="30694" stop="30778"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E469529" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29498" stop="29549"/>
              <exon start="29676" stop="29870"/>
              <exon start="30694" stop="30792"/>
              <exon start="30868" stop="30953"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303188" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29523" stop="29549"/>
              <exon start="29676" stop="29870"/>
              <exon start="30694" stop="30792"/>
              <exon start="30868" stop="31041"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E270875" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29715" stop="29870"/>
              <exon start="30694" stop="30792"/>
              <exon start="30868" stop="31339"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E604631" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29721" stop="29870"/>
              <exon start="30694" stop="30792"/>
              <exon start="30868" stop="31375"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E585155" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29753" stop="29870"/>
              <exon start="30694" stop="30792"/>
              <exon start="30868" stop="31153"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476133" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29754" stop="29870"/>
              <exon start="30694" stop="30792"/>
              <exon start="30868" stop="31183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E468692" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29802" stop="29870"/>
              <exon start="30694" stop="30792"/>
              <exon start="30868" stop="31261"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292204" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29819" stop="29870"/>
              <exon start="30694" stop="30792"/>
              <exon start="30868" stop="31401"/>
              <exon start="31575" stop="31713"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E591138" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30694" stop="30792"/>
              <exon start="30868" stop="31401"/>
              <exon start="31575" stop="31592"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E623031" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30694" stop="30792"/>
              <exon start="30868" stop="31119"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E453037" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30702" stop="30792"/>
              <exon start="30868" stop="31120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E378633" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30718" stop="30792"/>
              <exon start="30868" stop="31120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228965" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30718" stop="30792"/>
              <exon start="30868" stop="31119"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228676" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30718" stop="30792"/>
              <exon start="30868" stop="31119"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229156" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30724" stop="30792"/>
              <exon start="30868" stop="31271"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271229" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30755" stop="30792"/>
              <exon start="30868" stop="31401"/>
              <exon start="31575" stop="31973"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703067" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30782" stop="30792"/>
              <exon start="30868" stop="31401"/>
              <exon start="31575" stop="31707"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E456088" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30898" stop="31401"/>
              <exon start="31575" stop="31624"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272182" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30919" stop="31401"/>
              <exon start="31575" stop="31945"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E727275" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30972" stop="31401"/>
              <exon start="31575" stop="31680"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269263" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30972" stop="31401"/>
              <exon start="31575" stop="31623"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269311" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30972" stop="31401"/>
              <exon start="31575" stop="31614"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339769" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31003" stop="31401"/>
              <exon start="31575" stop="31609"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311009" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31010" stop="31401"/>
              <exon start="31575" stop="31972"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E728841" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31059" stop="31401"/>
              <exon start="31575" stop="31783"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396994" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31060" stop="31401"/>
              <exon start="31575" stop="31681"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281645" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31072" stop="31401"/>
              <exon start="31575" stop="32078"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734637" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31073" stop="31401"/>
              <exon start="31575" stop="31922"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339299" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31073" stop="31401"/>
              <exon start="31575" stop="31896"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347982" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31083" stop="31401"/>
              <exon start="31575" stop="31920"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343351" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31083" stop="31401"/>
              <exon start="31575" stop="31898"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343352" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31094" stop="31401"/>
              <exon start="31575" stop="31933"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339442" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31094" stop="31401"/>
              <exon start="31575" stop="31893"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344268" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31158" stop="31401"/>
              <exon start="31575" stop="31759"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268274" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31187" stop="31401"/>
              <exon start="31575" stop="32081"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E601613" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31196" stop="31401"/>
              <exon start="31575" stop="31973"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268299" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31294" stop="31401"/>
              <exon start="31575" stop="32071"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610472" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31309" stop="31401"/>
              <exon start="31575" stop="31905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E580576" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31594" stop="32109"/>
              <exon start="34439" stop="34460"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E286386" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTTTCAAGATTTTATAGTAGCAGAGAGAGAAAAAACTGAAGAGATCTGAAGAGGGGTCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCA : GATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG : GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT : ATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAA : CTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGG : AATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAG : GTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAG : GAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGCAGGTGGGGAGAGACAAAACAAAAAACAAAAACTTTGTTTTTAGTGTTTTAATTTTTTGTTTACAAATACTGCAATAGCAAGTACTGTTTAGTTTGATCATAACAATATTTCTTTTTCTTGCATCCTATATAGTTTAGGATGGAAAACTCATAAATGTTTTGCTGGTAGATGTGCGGCCTATCTTGAGATTACTTACTGGAGAGACA : AAAAAAAAAAAAAAAAAACTTG</gDNA_template>
            <first_frame> I  F  K  I  L  *  *  Q  R  E  K  K  L  K  R  S  E  E  G  S  D  *  F  L  L  S  K  N  L  S  F  E  R  P  S  L  I  F  V  K  K  G  I  I  E  G  G  V  T  V  F  S  L  N  L  C  I  *  F  L  L  Y  S  :  D  Q  G  L  L  G  L  Y  F  I  E  I  W  V  *  R  W  K  L  S  *  F  M  F  Q  L  K  L  E  L  N  R  S  I  F  *  K  K  M  E  S  R  I  M  F  Q  G  L  R  S  Q  *  N  S  A  L  M  G  L  K  N  L  R  R  K  *  V  E  F  L  *  A  M  F  Q  R  M  R  L  R  I  G  L  N  L  S  R  S  I  R  S  I  L  L  N  F  G  D  L  T  T  L  N  *  K  P  E  L  N  W  L  K  K  S  Y  R  K  R  T  K  L  D  L  R  S  L  K  N  *  R  P  K  G :   L  K  N  Q  F  S  L  N  K  G  K  P  S  V  L  R  I  R  N  F  G  V  L  L  M  V  R  *  R  K  W  H  L  C  M  R  L  W  A  S  S  A  V  L  G  M  Q  A  E  R  G  V  L  Q  C  V  H  L  R  R  S  S  I  I  L :   S  R  V  C  N  T  A  F  S  M  K  A  F  L  *  T  K  R  S  K  F  F  G  K  S  N  N  L  K  E  Q  G  K  M  L  K  R  L  L  L  Q  E  H  R  F  M  R  R  W  V  K  K  N  Q  S  R  V  R  S  N :   L  *  M  L  A  W  M  E  F  V  R  D  N  R  K  S  R  A  G  L  R  *  *  M  I  R  L  M  P  *  T  N  R  S  V  Y  W  M  R  N  *  R  T  L  W  R  R  G  T  R  L  M  N  I  F  W  N  *  E  N  S  V  K  K  G :   I  L  L  S  I  K  T  P  T  C  C  T  K  *  N  N  L  L  T  K  R  M  L  E  P  L  K  S  F  Q  L  Q  R :   S  T  S  S  F  L  F  G  V  V  V  S  L  L  E  M  T  M  R  G  D  S  C  S  R  L  I  L  G  S  *  A  G  T  A  G  *  G  I  L  M  K  S  H  W  C  Y  Q  K  H  L  L  S  P  V  L  K  F  Q  Q  E  L  M  Q  N  P  L  R  K  I  M  H  P  L  M  L  L  R  F  R  K  N  S  K  R  L  A  A  S  S  *  M  M  L  V  V  K  T  Q  K  A  Q  R  K  K  L  L  L  M  M  M  R  K  S  M  V  W  T  Y  T  R  I  L  S  P  R  K  S  K  L  M  R  Q  H  *  R  R  *  R  K  R  R  R  W  Q  K  I  N  R  L  W  R  G  S  V  S  W  P  R  K  Q  L  Q  K  L  Q  R  K  L  S  *  K  L  K  R  S  S  R :   N  V  R  R  K  Q  R  R  R  A  E  L  L  L  L  V  R  N  Q  S  R  N  Q  L  K  H  P  R  K  L  L  R  K  K  M  Q  R  R  L  L  K  Q  P  L  H  P  R  S  R  H  G  K  R  T  P  S  G  T  E  Q  H  V  Q  E  A  P  S  F  P  K  L  Y  *  S  A  R  K  Q  Q  T  T  G  Y  G  Q  L  L  L  L  H  S  R  F  W  Y  F  *  S  S  D  T  C  I  F  K  S  R  K  R  Q  V  G  R  D  K  T  K  N  K  N  F  V  F  S  V  L  I  F  C  L  Q  I  L  Q  *  Q  V  L  F  S  L  I  I  T  I  F  L  F  L  A  S  Y  I  V  *  D  G  K  L  I  N  V  L  L  V  D  V  R  P  I  L  R  L  L  T  G  E  T  :  K  K  K  K  K  K  L  </first_frame>
            <second_frame>  F  S  R  F  Y  S  S  R  E  R  K  N  *  R  D  L  K  R  G  L  T  S  F  F  S  Q  K  I  S  L  L  N  G  P  P  *  F  L  S  K  R  V  *  *  R  E  E  *  Q  S  F  L  *  I  S  A  F  S  F  C  C  T  Q :   I  R  D  F  S  V  C  I  S  L  K  Y  G  C  R  G  G  S  *  V  S  S  C  S  S  *  S  W  N  *  T  D  Q  S  S  E  R  K  W  K  A  E  S  C  F  R  D  Y  G  A  N  K  I  R  L  S  W  D  *  R  T  *  G  G  N  K  *  N  S  C  E  Q  C  S  K  G  C  G  *  G  L  A  *  T  *  A  G  P  F  V  L  Y  C  *  I  S  E  I  *  R  P  *  T  E  S  Q  N  *  T  G  *  K  R  A  T  E  K  E  P  S  *  I  S  D  H  *  K  I  E  G  Q  K   : G  *  K  I  N  F  H  *  T  K  E  S  P  Q  C  *  E  *  G  I  S  E  C  Y  *  W  *  D  K  G  N  G  T  S  A  *  G  F  G  P  A  P  R  F  *  E  C  R  P  R  E  G  S  Y  S  V  F  I  *  G  G  A  Q  S  S   : Y  Q  G  S  A  I  P  H  S  A  *  K  H  S  S  E  R  R  E  A  N  S  S  G  N  Q  T  T  *  R  N  K  G  R  C  *  K  G  C  C  C  K  S  T  D  S  *  D  D  G  *  K  R  I  N  P  E  S  G  Q   : T  Y  E  C  W  L  G  W  S  S  *  G  T  T  G  S  Q  G  Q  A  *  D  N  R  *  S  D  *  C  H  K  Q  T  D  R  Y  I  G  *  G  I  E  G  R  C  G  E  E  G  Q  D  L  *  T  Y  S  G  I  E  K  T  A  *  R  R   : E  F  F  F  L  S  K  L  Q  R  V  A  Q  S  E  T  T  C  *  P  K  G  C  W  S  P  *  R  A  F  S  Y  R   : G  R  Q  V  H  F  S  L  V  W  *  *  V  F  *  R  *  L  *  E  E  T  L  A  V  A  *  Y  *  A  A  E  Q  G  R  Q  D  E  E  S  *  *  K  A  T  G  V  T  R  S  T  Y  C  L  P  C  *  S  S  S  K  S  *  C  K  T  R  *  G  R  S  C  T  R  *  C  C  S  D  S  E  R  T  A  R  G  *  R  Q  A  A  E  *  C  S  W  *  K  L  K  K  H  R  E  K  S  C  C  *  *  *  *  G  N  L  W  F  G  P  T  Q  G  F  *  A  Q  E  N  R  N  *  *  G  N  T  E  G  D  E  E  R  G  G  D  G  K  K  *  T  G  Y  G  E  E  A  *  V  G  R  E  S  S  C  K  S  C  K  E  S  S  A  R  S  *  K  E  A  Q   : G  T  *  E  E  S  K  E  E  E  R  S  F  C  C  W  S  G  T  N  R  G  T  N  *  N  T  R  G  N  C  *  G  R  K  C  R  G  D  C  *  N  S  R  C  T  Q  G  Q  G  T  E  R  E  H  H  Q  A  Q  S  N  T  C  K  R  L  R  A  S  Q  S  Y  T  K  A  Q  E  S  N  K  L  L  A  M  G  S  C  S  C  C  T  R  D  S  G  T  S  S  H  R  I  H  V  S  S  K  V  E  R  G  R  W  G  E  T  K  Q  K  T  K  T  L  F  L  V  F  *  F  F  V  Y  K  Y  C  N  S  K  Y  C  L  V  *  S  *  Q  Y  F  F  F  L  H  P  I  *  F  R  M  E  N  S  *  M  F  C  W  *  M  C  G  L  S  *  D  Y  L  L  E  R  Q :   K  K  K  K  K  N  L </second_frame>
            <third_frame>   F  Q  D  F  I  V  A  E  R  E  K  T  E  E  I  *  R  G  V  *  L  V  S  S  L  K  K  S  L  F  *  T  A  L  P  N  F  C  Q  K  G  Y  N  R  G  R  S  N  S  L  F  S  K  S  L  H  L  V  F  A  V  L   : R  S  G  T  S  R  F  V  F  H  *  N  M  G  V  E  V  E  A  K  L  V  H  V  P  V  E  A  G  T  E  Q  I  N  L  L  K  E  N  G  K  P  N  H  V  S  G  I  T  E  P  I  K  F  G  S  H  G  T  E  E  P  K  E  E  I  S  R  I  P  V  S  N  V  P  K  D  A  V  E  D  W  P  E  P  K  Q  V  H  S  F  Y  T  V  K  F  R  R  F  D  D  P  K  L  K  A  R  I  E  L  A  E  K  E  L  Q  K  K  N  Q  A  R  S  Q  I  I  E  K  L  K  A  K  R  :  A  E  K  S  I  F  I  E  Q  R  K  A  L  S  A  E  N  K  E  F  R  S  A  I  D  G  K  I  K  E  M  A  P  L  H  E  A  L  G  Q  L  R  G  S  R  N  A  G  R  E  R  G  P  T  V  C  S  S  E  E  E  L  N  H  L  :  I  K  G  L  Q  Y  R  I  Q  H  E  S  I  P  L  N  E  E  K  Q  I  L  R  E  I  K  Q  L  E  G  T  R  E  D  V  K  K  V  A  A  A  R  A  Q  I  H  E  T  M  G  E  K  E  S  I  Q  S  Q  V  K  :  L  M  N  V  G  L  D  G  V  R  K  G  Q  Q  E  V  K  G  R  L  K  I  I  D  D  Q  I  D  A  I  N  K  Q  I  G  I  L  D  E  E  L  K  D  V  V  E  K  R  D  K  T  Y  E  H  I  L  E  L  R  K  Q  R  E  E  G  :  N  S  S  F  Y  Q  N  S  N  V  L  H  K  V  K  Q  L  A  D  Q  K  D  V  G  A  L  K  E  L  S  V  T  E  :  V  D  K  F  I  S  L  W  C  G  S  K  S  F  R  D  D  Y  E  R  R  L  L  Q  S  L  D  I  R  Q  L  S  R  D  G  R  M  R  N  P  D  E  K  P  L  V  L  P  E  A  P  T  V  S  R  A  E  V  P  A  R  A  N  A  K  P  V  K  E  D  H  A  P  V  D  A  A  P  I  Q  K  E  Q  Q  E  V  S  G  K  Q  L  N  D  A  R  G  K  N  S  K  S  T  E  K  K  A  V  V  D  D  D  E  E  I  Y  G  L  D  L  H  K  D  S  K  P  K  K  I  E  I  D  E  A  T  L  K  E  M  K  K  E  E  E  M  A  K  N  K  Q  A  M  E  R  K  R  K  L  A  E  K  A  A  A  K  A  A  K  K  A  Q  L  E  A  E  K  K  L  K  :  E  R  E  K  K  A  K  K  K  S  G  A  S  A  A  G  Q  E  P  I  E  E  P  T  E  T  P  E  E  I  A  E  E  E  N  A  E  E  T  V  E  T  A  V  A  P  K  V  K  A  R  K  E  N  T  I  R  H  R  A  T  R  A  R  G  S  E  L  P  K  A  I  L  K  R  K  K  A  T  N  Y  W  L  W  A  A  A  P  A  A  L  A  I  L  V  L  L  V  I  G  Y  M  Y  L  Q  K  *  K  E  A  G  G  E  R  Q  N  K  K  Q  K  L  C  F  *  C  F  N  F  L  F  T  N  T  A  I  A  S  T  V  *  F  D  H  N  N  I  S  F  S  C  I  L  Y  S  L  G  W  K  T  H  K  C  F  A  G  R  C  A  A  Y  L  E  I  T  Y  W  R  D   : K  K  K  K  K  K  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0046G04.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28352" stop="28717"/>
                    <exon start="29053" stop="29247"/>
                    <exon start="29370" stop="29549"/>
                    <exon start="29676" stop="29870"/>
                    <exon start="30694" stop="30792"/>
                    <exon start="30868" stop="31401"/>
                    <exon start="31575" stop="31895"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1887</number_coding_nucleotides>
                  <number_encoded_amino_acids>629</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NMGVEVEAKLVHVPVEAGTEQINLLKENGKPNHVSGITEPIKFGSHGTEEPKEEISRIPVSNVPKDAVEDWPEPKQVHSFYTVKFRRFDDPKLKARIELAEKELQKKNQARSQIIEKLKAKRAEKSIFIEQRKALSAENKEFRSAIDGKIKEMAPLHEALGQLRGSRNAGRERGPTVCSSEEELNHLIKGLQYRIQHESIPLNEEKQILREIKQLEGTREDVKKVAAARAQIHETMGEKESIQSQVKLMNVGLDGVRKGQQEVKGRLKIIDDQIDAINKQIGILDEELKDVVEKRDKTYEHILELRKQREEGNSSFYQNSNVLHKVKQLADQKDVGALKELSVTEVDKFISLWCGSKSFRDDYERRLLQSLDIRQLSRDGRMRNPDEKPLVLPEAPTVSRAEVPARANAKPVKEDHAPVDAAPIQKEQQEVSGKQLNDARGKNSKSTEKKAVVDDDEEIYGLDLHKDSKPKKIEIDEATLKEMKKEEEMAKNKQAMERKRKLAEKAAAKAAKKAQLEAEKKLKEREKKAKKKSGASAAGQEPIEEPTETPEEIAEEENAEETVETAVAPKVKARKENTIRHRATRARGSELPKAILKRKKATNYWLWAAAPAALAILVLLVIGYMYLQK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="26824" e_stop="27012"/>
            <exon e_start="28320" e_stop="28717"/>
            <exon e_start="29053" e_stop="29247"/>
            <exon e_start="29370" e_stop="29549"/>
            <exon e_start="29676" e_stop="29870"/>
            <exon e_start="30694" e_stop="30792"/>
            <exon e_start="30868" e_stop="31401"/>
            <exon e_start="31575" e_stop="32007"/>
            <exon e_start="32500" e_stop="32512"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.932" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.773" acc_prob="0.475" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.984"/>
          <exon-only e_score="0.846"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="26824" e_stop="27012" e_length="189"/>
          </exon>
          <intron i_serial="1" don_prob="0.932" acc_prob="0.989">
            <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="28320" e_stop="28717" e_length="398"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.998">
            <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="29053" e_stop="29247" e_length="195"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.991">
            <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="29370" e_stop="29549" e_length="180"/>
          </exon>
          <intron i_serial="4" don_prob="0.985" acc_prob="0.997">
            <gDNA_intron_boundary i_start="29550" i_stop="29675" i_length="126"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="29676" e_stop="29870" e_length="195"/>
          </exon>
          <intron i_serial="5" don_prob="0.773" acc_prob="0.475">
            <gDNA_intron_boundary i_start="29871" i_stop="30693" i_length="823"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="30694" e_stop="30792" e_length="99"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.967">
            <gDNA_intron_boundary i_start="30793" i_stop="30867" i_length="75"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="30868" e_stop="31401" e_length="534"/>
          </exon>
          <intron i_serial="7" don_prob="0.998" acc_prob="0.981">
            <gDNA_intron_boundary i_start="31402" i_stop="31574" i_length="173"/>
          </intron>
          <exon e_serial="8" e_score="0.984">
            <gDNA_exon_boundary e_start="31575" e_stop="32007" e_length="433"/>
          </exon>
          <intron i_serial="8" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="32008" i_stop="32499" i_length="492"/>
          </intron>
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              <exon start="29428" stop="29549"/>
              <exon start="29676" stop="29870"/>
              <exon start="30694" stop="30778"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E469529" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29498" stop="29549"/>
              <exon start="29676" stop="29870"/>
              <exon start="30694" stop="30792"/>
              <exon start="30868" stop="30953"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303188" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29523" stop="29549"/>
              <exon start="29676" stop="29870"/>
              <exon start="30694" stop="30792"/>
              <exon start="30868" stop="31041"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E270875" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29715" stop="29870"/>
              <exon start="30694" stop="30792"/>
              <exon start="30868" stop="31339"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E604631" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29721" stop="29870"/>
              <exon start="30694" stop="30792"/>
              <exon start="30868" stop="31375"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E585155" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29753" stop="29870"/>
              <exon start="30694" stop="30792"/>
              <exon start="30868" stop="31153"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476133" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29754" stop="29870"/>
              <exon start="30694" stop="30792"/>
              <exon start="30868" stop="31183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E468692" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29802" stop="29870"/>
              <exon start="30694" stop="30792"/>
              <exon start="30868" stop="31261"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292204" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29819" stop="29870"/>
              <exon start="30694" stop="30792"/>
              <exon start="30868" stop="31401"/>
              <exon start="31575" stop="31713"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E591138" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30694" stop="30792"/>
              <exon start="30868" stop="31401"/>
              <exon start="31575" stop="31592"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E623031" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30694" stop="30792"/>
              <exon start="30868" stop="31119"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E453037" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30702" stop="30792"/>
              <exon start="30868" stop="31120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E378633" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30718" stop="30792"/>
              <exon start="30868" stop="31120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228965" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30718" stop="30792"/>
              <exon start="30868" stop="31119"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228676" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30718" stop="30792"/>
              <exon start="30868" stop="31119"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229156" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30724" stop="30792"/>
              <exon start="30868" stop="31271"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271229" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30755" stop="30792"/>
              <exon start="30868" stop="31401"/>
              <exon start="31575" stop="31973"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703067" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30782" stop="30792"/>
              <exon start="30868" stop="31401"/>
              <exon start="31575" stop="31707"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E456088" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30898" stop="31401"/>
              <exon start="31575" stop="31624"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272182" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30919" stop="31401"/>
              <exon start="31575" stop="31945"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E727275" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30972" stop="31401"/>
              <exon start="31575" stop="31680"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269263" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30972" stop="31401"/>
              <exon start="31575" stop="31623"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269311" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30972" stop="31401"/>
              <exon start="31575" stop="31614"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339769" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31003" stop="31401"/>
              <exon start="31575" stop="31609"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311009" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31010" stop="31401"/>
              <exon start="31575" stop="31972"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E728841" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31059" stop="31401"/>
              <exon start="31575" stop="31783"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396994" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31060" stop="31401"/>
              <exon start="31575" stop="31681"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281645" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31073" stop="31401"/>
              <exon start="31575" stop="31922"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339299" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31073" stop="31401"/>
              <exon start="31575" stop="31896"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347982" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31083" stop="31401"/>
              <exon start="31575" stop="31920"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343351" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31083" stop="31401"/>
              <exon start="31575" stop="31898"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343352" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31094" stop="31401"/>
              <exon start="31575" stop="31933"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339442" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31094" stop="31401"/>
              <exon start="31575" stop="31893"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344268" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31158" stop="31401"/>
              <exon start="31575" stop="31759"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268274" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31196" stop="31401"/>
              <exon start="31575" stop="31973"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268299" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31309" stop="31401"/>
              <exon start="31575" stop="31905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E580576" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31396" stop="31401"/>
              <exon start="31575" stop="32007"/>
              <exon start="32500" stop="32512"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226414" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTTTCAAGATTTTATAGTAGCAGAGAGAGAAAAAACTGAAGAGATCTGAAGAGGGGTCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCA : GATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG : GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT : ATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAA : CTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGG : AATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAG : GTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAG : GAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGCAGGTGGGGAGAGACAAAACAAAAAACAAAAACTTTGTTTTTAGTGTTTTAATTTTTTGTTTACAAATACTGCAATAGCAAGTACTGTTTAGTTTGATCATAACA : AAAAAAGAAAGAA</gDNA_template>
            <first_frame> I  F  K  I  L  *  *  Q  R  E  K  K  L  K  R  S  E  E  G  S  D  *  F  L  L  S  K  N  L  S  F  E  R  P  S  L  I  F  V  K  K  G  I  I  E  G  G  V  T  V  F  S  L  N  L  C  I  *  F  L  L  Y  S  :  D  Q  G  L  L  G  L  Y  F  I  E  I  W  V  *  R  W  K  L  S  *  F  M  F  Q  L  K  L  E  L  N  R  S  I  F  *  K  K  M  E  S  R  I  M  F  Q  G  L  R  S  Q  *  N  S  A  L  M  G  L  K  N  L  R  R  K  *  V  E  F  L  *  A  M  F  Q  R  M  R  L  R  I  G  L  N  L  S  R  S  I  R  S  I  L  L  N  F  G  D  L  T  T  L  N  *  K  P  E  L  N  W  L  K  K  S  Y  R  K  R  T  K  L  D  L  R  S  L  K  N  *  R  P  K  G :   L  K  N  Q  F  S  L  N  K  G  K  P  S  V  L  R  I  R  N  F  G  V  L  L  M  V  R  *  R  K  W  H  L  C  M  R  L  W  A  S  S  A  V  L  G  M  Q  A  E  R  G  V  L  Q  C  V  H  L  R  R  S  S  I  I  L :   S  R  V  C  N  T  A  F  S  M  K  A  F  L  *  T  K  R  S  K  F  F  G  K  S  N  N  L  K  E  Q  G  K  M  L  K  R  L  L  L  Q  E  H  R  F  M  R  R  W  V  K  K  N  Q  S  R  V  R  S  N :   L  *  M  L  A  W  M  E  F  V  R  D  N  R  K  S  R  A  G  L  R  *  *  M  I  R  L  M  P  *  T  N  R  S  V  Y  W  M  R  N  *  R  T  L  W  R  R  G  T  R  L  M  N  I  F  W  N  *  E  N  S  V  K  K  G :   I  L  L  S  I  K  T  P  T  C  C  T  K  *  N  N  L  L  T  K  R  M  L  E  P  L  K  S  F  Q  L  Q  R :   S  T  S  S  F  L  F  G  V  V  V  S  L  L  E  M  T  M  R  G  D  S  C  S  R  L  I  L  G  S  *  A  G  T  A  G  *  G  I  L  M  K  S  H  W  C  Y  Q  K  H  L  L  S  P  V  L  K  F  Q  Q  E  L  M  Q  N  P  L  R  K  I  M  H  P  L  M  L  L  R  F  R  K  N  S  K  R  L  A  A  S  S  *  M  M  L  V  V  K  T  Q  K  A  Q  R  K  K  L  L  L  M  M  M  R  K  S  M  V  W  T  Y  T  R  I  L  S  P  R  K  S  K  L  M  R  Q  H  *  R  R  *  R  K  R  R  R  W  Q  K  I  N  R  L  W  R  G  S  V  S  W  P  R  K  Q  L  Q  K  L  Q  R  K  L  S  *  K  L  K  R  S  S  R :   N  V  R  R  K  Q  R  R  R  A  E  L  L  L  L  V  R  N  Q  S  R  N  Q  L  K  H  P  R  K  L  L  R  K  K  M  Q  R  R  L  L  K  Q  P  L  H  P  R  S  R  H  G  K  R  T  P  S  G  T  E  Q  H  V  Q  E  A  P  S  F  P  K  L  Y  *  S  A  R  K  Q  Q  T  T  G  Y  G  Q  L  L  L  L  H  S  R  F  W  Y  F  *  S  S  D  T  C  I  F  K  S  R  K  R  Q  V  G  R  D  K  T  K  N  K  N  F  V  F  S  V  L  I  F  C  L  Q  I  L  Q  *  Q  V  L  F  S  L  I  I  T  :  K  K  E  R  </first_frame>
            <second_frame>  F  S  R  F  Y  S  S  R  E  R  K  N  *  R  D  L  K  R  G  L  T  S  F  F  S  Q  K  I  S  L  L  N  G  P  P  *  F  L  S  K  R  V  *  *  R  E  E  *  Q  S  F  L  *  I  S  A  F  S  F  C  C  T  Q :   I  R  D  F  S  V  C  I  S  L  K  Y  G  C  R  G  G  S  *  V  S  S  C  S  S  *  S  W  N  *  T  D  Q  S  S  E  R  K  W  K  A  E  S  C  F  R  D  Y  G  A  N  K  I  R  L  S  W  D  *  R  T  *  G  G  N  K  *  N  S  C  E  Q  C  S  K  G  C  G  *  G  L  A  *  T  *  A  G  P  F  V  L  Y  C  *  I  S  E  I  *  R  P  *  T  E  S  Q  N  *  T  G  *  K  R  A  T  E  K  E  P  S  *  I  S  D  H  *  K  I  E  G  Q  K   : G  *  K  I  N  F  H  *  T  K  E  S  P  Q  C  *  E  *  G  I  S  E  C  Y  *  W  *  D  K  G  N  G  T  S  A  *  G  F  G  P  A  P  R  F  *  E  C  R  P  R  E  G  S  Y  S  V  F  I  *  G  G  A  Q  S  S   : Y  Q  G  S  A  I  P  H  S  A  *  K  H  S  S  E  R  R  E  A  N  S  S  G  N  Q  T  T  *  R  N  K  G  R  C  *  K  G  C  C  C  K  S  T  D  S  *  D  D  G  *  K  R  I  N  P  E  S  G  Q   : T  Y  E  C  W  L  G  W  S  S  *  G  T  T  G  S  Q  G  Q  A  *  D  N  R  *  S  D  *  C  H  K  Q  T  D  R  Y  I  G  *  G  I  E  G  R  C  G  E  E  G  Q  D  L  *  T  Y  S  G  I  E  K  T  A  *  R  R   : E  F  F  F  L  S  K  L  Q  R  V  A  Q  S  E  T  T  C  *  P  K  G  C  W  S  P  *  R  A  F  S  Y  R   : G  R  Q  V  H  F  S  L  V  W  *  *  V  F  *  R  *  L  *  E  E  T  L  A  V  A  *  Y  *  A  A  E  Q  G  R  Q  D  E  E  S  *  *  K  A  T  G  V  T  R  S  T  Y  C  L  P  C  *  S  S  S  K  S  *  C  K  T  R  *  G  R  S  C  T  R  *  C  C  S  D  S  E  R  T  A  R  G  *  R  Q  A  A  E  *  C  S  W  *  K  L  K  K  H  R  E  K  S  C  C  *  *  *  *  G  N  L  W  F  G  P  T  Q  G  F  *  A  Q  E  N  R  N  *  *  G  N  T  E  G  D  E  E  R  G  G  D  G  K  K  *  T  G  Y  G  E  E  A  *  V  G  R  E  S  S  C  K  S  C  K  E  S  S  A  R  S  *  K  E  A  Q   : G  T  *  E  E  S  K  E  E  E  R  S  F  C  C  W  S  G  T  N  R  G  T  N  *  N  T  R  G  N  C  *  G  R  K  C  R  G  D  C  *  N  S  R  C  T  Q  G  Q  G  T  E  R  E  H  H  Q  A  Q  S  N  T  C  K  R  L  R  A  S  Q  S  Y  T  K  A  Q  E  S  N  K  L  L  A  M  G  S  C  S  C  C  T  R  D  S  G  T  S  S  H  R  I  H  V  S  S  K  V  E  R  G  R  W  G  E  T  K  Q  K  T  K  T  L  F  L  V  F  *  F  F  V  Y  K  Y  C  N  S  K  Y  C  L  V  *  S  *  Q :   K  K  K  E </second_frame>
            <third_frame>   F  Q  D  F  I  V  A  E  R  E  K  T  E  E  I  *  R  G  V  *  L  V  S  S  L  K  K  S  L  F  *  T  A  L  P  N  F  C  Q  K  G  Y  N  R  G  R  S  N  S  L  F  S  K  S  L  H  L  V  F  A  V  L   : R  S  G  T  S  R  F  V  F  H  *  N  M  G  V  E  V  E  A  K  L  V  H  V  P  V  E  A  G  T  E  Q  I  N  L  L  K  E  N  G  K  P  N  H  V  S  G  I  T  E  P  I  K  F  G  S  H  G  T  E  E  P  K  E  E  I  S  R  I  P  V  S  N  V  P  K  D  A  V  E  D  W  P  E  P  K  Q  V  H  S  F  Y  T  V  K  F  R  R  F  D  D  P  K  L  K  A  R  I  E  L  A  E  K  E  L  Q  K  K  N  Q  A  R  S  Q  I  I  E  K  L  K  A  K  R  :  A  E  K  S  I  F  I  E  Q  R  K  A  L  S  A  E  N  K  E  F  R  S  A  I  D  G  K  I  K  E  M  A  P  L  H  E  A  L  G  Q  L  R  G  S  R  N  A  G  R  E  R  G  P  T  V  C  S  S  E  E  E  L  N  H  L  :  I  K  G  L  Q  Y  R  I  Q  H  E  S  I  P  L  N  E  E  K  Q  I  L  R  E  I  K  Q  L  E  G  T  R  E  D  V  K  K  V  A  A  A  R  A  Q  I  H  E  T  M  G  E  K  E  S  I  Q  S  Q  V  K  :  L  M  N  V  G  L  D  G  V  R  K  G  Q  Q  E  V  K  G  R  L  K  I  I  D  D  Q  I  D  A  I  N  K  Q  I  G  I  L  D  E  E  L  K  D  V  V  E  K  R  D  K  T  Y  E  H  I  L  E  L  R  K  Q  R  E  E  G  :  N  S  S  F  Y  Q  N  S  N  V  L  H  K  V  K  Q  L  A  D  Q  K  D  V  G  A  L  K  E  L  S  V  T  E  :  V  D  K  F  I  S  L  W  C  G  S  K  S  F  R  D  D  Y  E  R  R  L  L  Q  S  L  D  I  R  Q  L  S  R  D  G  R  M  R  N  P  D  E  K  P  L  V  L  P  E  A  P  T  V  S  R  A  E  V  P  A  R  A  N  A  K  P  V  K  E  D  H  A  P  V  D  A  A  P  I  Q  K  E  Q  Q  E  V  S  G  K  Q  L  N  D  A  R  G  K  N  S  K  S  T  E  K  K  A  V  V  D  D  D  E  E  I  Y  G  L  D  L  H  K  D  S  K  P  K  K  I  E  I  D  E  A  T  L  K  E  M  K  K  E  E  E  M  A  K  N  K  Q  A  M  E  R  K  R  K  L  A  E  K  A  A  A  K  A  A  K  K  A  Q  L  E  A  E  K  K  L  K  :  E  R  E  K  K  A  K  K  K  S  G  A  S  A  A  G  Q  E  P  I  E  E  P  T  E  T  P  E  E  I  A  E  E  E  N  A  E  E  T  V  E  T  A  V  A  P  K  V  K  A  R  K  E  N  T  I  R  H  R  A  T  R  A  R  G  S  E  L  P  K  A  I  L  K  R  K  K  A  T  N  Y  W  L  W  A  A  A  P  A  A  L  A  I  L  V  L  L  V  I  G  Y  M  Y  L  Q  K  *  K  E  A  G  G  E  R  Q  N  K  K  Q  K  L  C  F  *  C  F  N  F  L  F  T  N  T  A  I  A  S  T  V  *  F  D  H  N   : K  K  R  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0046G04.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28352" stop="28717"/>
                    <exon start="29053" stop="29247"/>
                    <exon start="29370" stop="29549"/>
                    <exon start="29676" stop="29870"/>
                    <exon start="30694" stop="30792"/>
                    <exon start="30868" stop="31401"/>
                    <exon start="31575" stop="31895"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1887</number_coding_nucleotides>
                  <number_encoded_amino_acids>629</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NMGVEVEAKLVHVPVEAGTEQINLLKENGKPNHVSGITEPIKFGSHGTEEPKEEISRIPVSNVPKDAVEDWPEPKQVHSFYTVKFRRFDDPKLKARIELAEKELQKKNQARSQIIEKLKAKRAEKSIFIEQRKALSAENKEFRSAIDGKIKEMAPLHEALGQLRGSRNAGRERGPTVCSSEEELNHLIKGLQYRIQHESIPLNEEKQILREIKQLEGTREDVKKVAAARAQIHETMGEKESIQSQVKLMNVGLDGVRKGQQEVKGRLKIIDDQIDAINKQIGILDEELKDVVEKRDKTYEHILELRKQREEGNSSFYQNSNVLHKVKQLADQKDVGALKELSVTEVDKFISLWCGSKSFRDDYERRLLQSLDIRQLSRDGRMRNPDEKPLVLPEAPTVSRAEVPARANAKPVKEDHAPVDAAPIQKEQQEVSGKQLNDARGKNSKSTEKKAVVDDDEEIYGLDLHKDSKPKKIEIDEATLKEMKKEEEMAKNKQAMERKRKLAEKAAAKAAKKAQLEAEKKLKEREKKAKKKSGASAAGQEPIEEPTETPEEIAEEENAEETVETAVAPKVKARKENTIRHRATRARGSELPKAILKRKKATNYWLWAAAPAALAILVLLVIGYMYLQK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="26824" e_stop="27012"/>
            <exon e_start="28320" e_stop="28717"/>
            <exon e_start="28831" e_stop="28937"/>
            <exon e_start="29053" e_stop="29247"/>
            <exon e_start="29370" e_stop="29549"/>
            <exon e_start="29676" e_stop="29870"/>
            <exon e_start="30694" e_stop="30792"/>
            <exon e_start="30868" e_stop="31401"/>
            <exon e_start="31575" e_stop="32167"/>
            <exon e_start="33802" e_stop="33812"/>
            <exon e_start="34408" e_stop="34453"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.932" acc_prob="0.989" e_score="0.905"/>
          <exon-intron don_prob="0.996" acc_prob="0.340" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.773" acc_prob="0.475" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.820" e_score="0.983"/>
          <exon-intron don_prob="0.769" acc_prob="0.879" e_score="0.545"/>
          <exon-only e_score="0.609"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.905">
            <gDNA_exon_boundary e_start="26824" e_stop="27012" e_length="189"/>
          </exon>
          <intron i_serial="1" don_prob="0.932" acc_prob="0.989">
            <gDNA_intron_boundary i_start="27013" i_stop="28319" i_length="1307"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="28320" e_stop="28717" e_length="398"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.340">
            <gDNA_intron_boundary i_start="28718" i_stop="28830" i_length="113"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="28831" e_stop="28937" e_length="107"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="28938" i_stop="29052" i_length="115"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="29053" e_stop="29247" e_length="195"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.991">
            <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="29370" e_stop="29549" e_length="180"/>
          </exon>
          <intron i_serial="5" don_prob="0.985" acc_prob="0.997">
            <gDNA_intron_boundary i_start="29550" i_stop="29675" i_length="126"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="29676" e_stop="29870" e_length="195"/>
          </exon>
          <intron i_serial="6" don_prob="0.773" acc_prob="0.475">
            <gDNA_intron_boundary i_start="29871" i_stop="30693" i_length="823"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="30694" e_stop="30792" e_length="99"/>
          </exon>
          <intron i_serial="7" don_prob="1.000" acc_prob="0.967">
            <gDNA_intron_boundary i_start="30793" i_stop="30867" i_length="75"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="30868" e_stop="31401" e_length="534"/>
          </exon>
          <intron i_serial="8" don_prob="0.998" acc_prob="0.981">
            <gDNA_intron_boundary i_start="31402" i_stop="31574" i_length="173"/>
          </intron>
          <exon e_serial="9" e_score="0.983">
            <gDNA_exon_boundary e_start="31575" e_stop="32167" e_length="593"/>
          </exon>
          <intron i_serial="9" don_prob="0.000" acc_prob="0.820">
            <gDNA_intron_boundary i_start="32168" i_stop="33801" i_length="1634"/>
          </intron>
          <exon e_serial="10" e_score="0.545">
            <gDNA_exon_boundary e_start="33802" e_stop="33812" e_length="11"/>
          </exon>
          <intron i_serial="10" don_prob="0.769" acc_prob="0.879">
            <gDNA_intron_boundary i_start="33813" i_stop="34407" i_length="595"/>
          </intron>
          <exon e_serial="11" e_score="0.609">
            <gDNA_exon_boundary e_start="34408" e_stop="34453" e_length="46"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26824" stop="27012"/>
              <exon start="28320" stop="28595"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E478029" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26871" stop="27012"/>
              <exon start="28320" stop="28717"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252774" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26872" stop="27012"/>
              <exon start="28320" stop="28439"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E442778" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26878" stop="27012"/>
              <exon start="28320" stop="28504"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297039" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26880" stop="27012"/>
              <exon start="28320" stop="28717"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E583472" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26880" stop="27012"/>
              <exon start="28320" stop="28597"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E581815" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26881" stop="27012"/>
              <exon start="28320" stop="28655"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204432" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26881" stop="27012"/>
              <exon start="28320" stop="28633"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333133" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26881" stop="27012"/>
              <exon start="28320" stop="28503"/>
            </gDNA_exon_coordinates>
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          <description PGL_serial="5" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTTTCAAGATTTTATAGTAGCAGAGAGAGAAAAAACTGAAGAGATCTGAAGAGGGGTCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCA : GATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG : ATTTTTACCATGTGTTGCTGCGTTGAACTGGAAGTATTATAAAGTCAAAATGAAAGATCTTGTTATCCTACAGTTTTAACTAATTTCTGCAAATTCAGCAAGCTTTC : GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT : ATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAA : CTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGG : AATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAG : GTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAG : GAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGCAGGTGGGGAGAGACAAAACAAAAAACAAAAACTTTGTTTTTAGTGTTTTAATTTTTTGTTTACAAATACTGCAATAGCAAGTACTGTTTAGTTTGATCATAACAATATTTCTTTTTCTTGCATCCTATATAGTTTAGGATGGAAAACTCATAAATGTTTTGCTGGTAGATGTGCGGCCTATCTTGAGATTACTTACTGGAGAGACAGTCTACATGTTTTTCTTTTGTTGCTGTAGTTGATATTATATTGACATTTTGCTTAATC : AGCTCGAACTT : GTACAAAAATTAGTCCTCCTCCACTATGCAAAAAAAAAAAAAAAAA</gDNA_template>
            <first_frame> I  F  K  I  L  *  *  Q  R  E  K  K  L  K  R  S  E  E  G  S  D  *  F  L  L  S  K  N  L  S  F  E  R  P  S  L  I  F  V  K  K  G  I  I  E  G  G  V  T  V  F  S  L  N  L  C  I  *  F  L  L  Y  S  :  D  Q  G  L  L  G  L  Y  F  I  E  I  W  V  *  R  W  K  L  S  *  F  M  F  Q  L  K  L  E  L  N  R  S  I  F  *  K  K  M  E  S  R  I  M  F  Q  G  L  R  S  Q  *  N  S  A  L  M  G  L  K  N  L  R  R  K  *  V  E  F  L  *  A  M  F  Q  R  M  R  L  R  I  G  L  N  L  S  R  S  I  R  S  I  L  L  N  F  G  D  L  T  T  L  N  *  K  P  E  L  N  W  L  K  K  S  Y  R  K  R  T  K  L  D  L  R  S  L  K  N  *  R  P  K  G :   F  L  P  C  V  A  A  L  N  W  K  Y  Y  K  V  K  M  K  D  L  V  I  L  Q  F  *  L  I  S  A  N  S  A  S  F   : R  *  K  I  N  F  H  *  T  K  E  S  P  Q  C  *  E  *  G  I  S  E  C  Y  *  W  *  D  K  G  N  G  T  S  A  *  G  F  G  P  A  P  R  F  *  E  C  R  P  R  E  G  S  Y  S  V  F  I  *  G  G  A  Q  S  S   : Y  Q  G  S  A  I  P  H  S  A  *  K  H  S  S  E  R  R  E  A  N  S  S  G  N  Q  T  T  *  R  N  K  G  R  C  *  K  G  C  C  C  K  S  T  D  S  *  D  D  G  *  K  R  I  N  P  E  S  G  Q   : T  Y  E  C  W  L  G  W  S  S  *  G  T  T  G  S  Q  G  Q  A  *  D  N  R  *  S  D  *  C  H  K  Q  T  D  R  Y  I  G  *  G  I  E  G  R  C  G  E  E  G  Q  D  L  *  T  Y  S  G  I  E  K  T  A  *  R  R   : E  F  F  F  L  S  K  L  Q  R  V  A  Q  S  E  T  T  C  *  P  K  G  C  W  S  P  *  R  A  F  S  Y  R   : G  R  Q  V  H  F  S  L  V  W  *  *  V  F  *  R  *  L  *  E  E  T  L  A  V  A  *  Y  *  A  A  E  Q  G  R  Q  D  E  E  S  *  *  K  A  T  G  V  T  R  S  T  Y  C  L  P  C  *  S  S  S  K  S  *  C  K  T  R  *  G  R  S  C  T  R  *  C  C  S  D  S  E  R  T  A  R  G  *  R  Q  A  A  E  *  C  S  W  *  K  L  K  K  H  R  E  K  S  C  C  *  *  *  *  G  N  L  W  F  G  P  T  Q  G  F  *  A  Q  E  N  R  N  *  *  G  N  T  E  G  D  E  E  R  G  G  D  G  K  K  *  T  G  Y  G  E  E  A  *  V  G  R  E  S  S  C  K  S  C  K  E  S  S  A  R  S  *  K  E  A  Q   : G  T  *  E  E  S  K  E  E  E  R  S  F  C  C  W  S  G  T  N  R  G  T  N  *  N  T  R  G  N  C  *  G  R  K  C  R  G  D  C  *  N  S  R  C  T  Q  G  Q  G  T  E  R  E  H  H  Q  A  Q  S  N  T  C  K  R  L  R  A  S  Q  S  Y  T  K  A  Q  E  S  N  K  L  L  A  M  G  S  C  S  C  C  T  R  D  S  G  T  S  S  H  R  I  H  V  S  S  K  V  E  R  G  R  W  G  E  T  K  Q  K  T  K  T  L  F  L  V  F  *  F  F  V  Y  K  Y  C  N  S  K  Y  C  L  V  *  S  *  Q  Y  F  F  F  L  H  P  I  *  F  R  M  E  N  S  *  M  F  C  W  *  M  C  G  L  S  *  D  Y  L  L  E  R  Q  S  T  C  F  S  F  V  A  V  V  D  I  I  L  T  F  C  L  I  :  S  S  N  L :   Y  K  N  *  S  S  S  T  M  Q  K  K  K  K  K </first_frame>
            <second_frame>  F  S  R  F  Y  S  S  R  E  R  K  N  *  R  D  L  K  R  G  L  T  S  F  F  S  Q  K  I  S  L  L  N  G  P  P  *  F  L  S  K  R  V  *  *  R  E  E  *  Q  S  F  L  *  I  S  A  F  S  F  C  C  T  Q :   I  R  D  F  S  V  C  I  S  L  K  Y  G  C  R  G  G  S  *  V  S  S  C  S  S  *  S  W  N  *  T  D  Q  S  S  E  R  K  W  K  A  E  S  C  F  R  D  Y  G  A  N  K  I  R  L  S  W  D  *  R  T  *  G  G  N  K  *  N  S  C  E  Q  C  S  K  G  C  G  *  G  L  A  *  T  *  A  G  P  F  V  L  Y  C  *  I  S  E  I  *  R  P  *  T  E  S  Q  N  *  T  G  *  K  R  A  T  E  K  E  P  S  *  I  S  D  H  *  K  I  E  G  Q  K   : D  F  Y  H  V  L  L  R  *  T  G  S  I  I  K  S  K  *  K  I  L  L  S  Y  S  F  N  *  F  L  Q  I  Q  Q  A  F  :  A  E  K  S  I  F  I  E  Q  R  K  A  L  S  A  E  N  K  E  F  R  S  A  I  D  G  K  I  K  E  M  A  P  L  H  E  A  L  G  Q  L  R  G  S  R  N  A  G  R  E  R  G  P  T  V  C  S  S  E  E  E  L  N  H  L  :  I  K  G  L  Q  Y  R  I  Q  H  E  S  I  P  L  N  E  E  K  Q  I  L  R  E  I  K  Q  L  E  G  T  R  E  D  V  K  K  V  A  A  A  R  A  Q  I  H  E  T  M  G  E  K  E  S  I  Q  S  Q  V  K  :  L  M  N  V  G  L  D  G  V  R  K  G  Q  Q  E  V  K  G  R  L  K  I  I  D  D  Q  I  D  A  I  N  K  Q  I  G  I  L  D  E  E  L  K  D  V  V  E  K  R  D  K  T  Y  E  H  I  L  E  L  R  K  Q  R  E  E  G  :  N  S  S  F  Y  Q  N  S  N  V  L  H  K  V  K  Q  L  A  D  Q  K  D  V  G  A  L  K  E  L  S  V  T  E  :  V  D  K  F  I  S  L  W  C  G  S  K  S  F  R  D  D  Y  E  R  R  L  L  Q  S  L  D  I  R  Q  L  S  R  D  G  R  M  R  N  P  D  E  K  P  L  V  L  P  E  A  P  T  V  S  R  A  E  V  P  A  R  A  N  A  K  P  V  K  E  D  H  A  P  V  D  A  A  P  I  Q  K  E  Q  Q  E  V  S  G  K  Q  L  N  D  A  R  G  K  N  S  K  S  T  E  K  K  A  V  V  D  D  D  E  E  I  Y  G  L  D  L  H  K  D  S  K  P  K  K  I  E  I  D  E  A  T  L  K  E  M  K  K  E  E  E  M  A  K  N  K  Q  A  M  E  R  K  R  K  L  A  E  K  A  A  A  K  A  A  K  K  A  Q  L  E  A  E  K  K  L  K  :  E  R  E  K  K  A  K  K  K  S  G  A  S  A  A  G  Q  E  P  I  E  E  P  T  E  T  P  E  E  I  A  E  E  E  N  A  E  E  T  V  E  T  A  V  A  P  K  V  K  A  R  K  E  N  T  I  R  H  R  A  T  R  A  R  G  S  E  L  P  K  A  I  L  K  R  K  K  A  T  N  Y  W  L  W  A  A  A  P  A  A  L  A  I  L  V  L  L  V  I  G  Y  M  Y  L  Q  K  *  K  E  A  G  G  E  R  Q  N  K  K  Q  K  L  C  F  *  C  F  N  F  L  F  T  N  T  A  I  A  S  T  V  *  F  D  H  N  N  I  S  F  S  C  I  L  Y  S  L  G  W  K  T  H  K  C  F  A  G  R  C  A  A  Y  L  E  I  T  Y  W  R  D  S  L  H  V  F  L  L  L  L  *  L  I  L  Y  *  H  F  A  *  S :   A  R  T   : C  T  K  I  S  P  P  P  L  C  K  K  K  K  K   </second_frame>
            <third_frame>   F  Q  D  F  I  V  A  E  R  E  K  T  E  E  I  *  R  G  V  *  L  V  S  S  L  K  K  S  L  F  *  T  A  L  P  N  F  C  Q  K  G  Y  N  R  G  R  S  N  S  L  F  S  K  S  L  H  L  V  F  A  V  L   : R  S  G  T  S  R  F  V  F  H  *  N  M  G  V  E  V  E  A  K  L  V  H  V  P  V  E  A  G  T  E  Q  I  N  L  L  K  E  N  G  K  P  N  H  V  S  G  I  T  E  P  I  K  F  G  S  H  G  T  E  E  P  K  E  E  I  S  R  I  P  V  S  N  V  P  K  D  A  V  E  D  W  P  E  P  K  Q  V  H  S  F  Y  T  V  K  F  R  R  F  D  D  P  K  L  K  A  R  I  E  L  A  E  K  E  L  Q  K  K  N  Q  A  R  S  Q  I  I  E  K  L  K  A  K  R  :  I  F  T  M  C  C  C  V  E  L  E  V  L  *  S  Q  N  E  R  S  C  Y  P  T  V  L  T  N  F  C  K  F  S  K  L  S :   L  K  N  Q  F  S  L  N  K  G  K  P  S  V  L  R  I  R  N  F  G  V  L  L  M  V  R  *  R  K  W  H  L  C  M  R  L  W  A  S  S  A  V  L  G  M  Q  A  E  R  G  V  L  Q  C  V  H  L  R  R  S  S  I  I  L :   S  R  V  C  N  T  A  F  S  M  K  A  F  L  *  T  K  R  S  K  F  F  G  K  S  N  N  L  K  E  Q  G  K  M  L  K  R  L  L  L  Q  E  H  R  F  M  R  R  W  V  K  K  N  Q  S  R  V  R  S  N :   L  *  M  L  A  W  M  E  F  V  R  D  N  R  K  S  R  A  G  L  R  *  *  M  I  R  L  M  P  *  T  N  R  S  V  Y  W  M  R  N  *  R  T  L  W  R  R  G  T  R  L  M  N  I  F  W  N  *  E  N  S  V  K  K  G :   I  L  L  S  I  K  T  P  T  C  C  T  K  *  N  N  L  L  T  K  R  M  L  E  P  L  K  S  F  Q  L  Q  R :   S  T  S  S  F  L  F  G  V  V  V  S  L  L  E  M  T  M  R  G  D  S  C  S  R  L  I  L  G  S  *  A  G  T  A  G  *  G  I  L  M  K  S  H  W  C  Y  Q  K  H  L  L  S  P  V  L  K  F  Q  Q  E  L  M  Q  N  P  L  R  K  I  M  H  P  L  M  L  L  R  F  R  K  N  S  K  R  L  A  A  S  S  *  M  M  L  V  V  K  T  Q  K  A  Q  R  K  K  L  L  L  M  M  M  R  K  S  M  V  W  T  Y  T  R  I  L  S  P  R  K  S  K  L  M  R  Q  H  *  R  R  *  R  K  R  R  R  W  Q  K  I  N  R  L  W  R  G  S  V  S  W  P  R  K  Q  L  Q  K  L  Q  R  K  L  S  *  K  L  K  R  S  S  R :   N  V  R  R  K  Q  R  R  R  A  E  L  L  L  L  V  R  N  Q  S  R  N  Q  L  K  H  P  R  K  L  L  R  K  K  M  Q  R  R  L  L  K  Q  P  L  H  P  R  S  R  H  G  K  R  T  P  S  G  T  E  Q  H  V  Q  E  A  P  S  F  P  K  L  Y  *  S  A  R  K  Q  Q  T  T  G  Y  G  Q  L  L  L  L  H  S  R  F  W  Y  F  *  S  S  D  T  C  I  F  K  S  R  K  R  Q  V  G  R  D  K  T  K  N  K  N  F  V  F  S  V  L  I  F  C  L  Q  I  L  Q  *  Q  V  L  F  S  L  I  I  T  I  F  L  F  L  A  S  Y  I  V  *  D  G  K  L  I  N  V  L  L  V  D  V  R  P  I  L  R  L  L  T  G  E  T  V  Y  M  F  F  F  C  C  C  S  *  Y  Y  I  D  I  L  L  N   : Q  L  E  L  :  V  Q  K  L  V  L  L  H  Y  A  K  K  K  K  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0046G04.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28914" stop="28937"/>
                    <exon start="29053" stop="29247"/>
                    <exon start="29370" stop="29549"/>
                    <exon start="29676" stop="29870"/>
                    <exon start="30694" stop="30792"/>
                    <exon start="30868" stop="31401"/>
                    <exon start="31575" stop="31895"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1545</number_coding_nucleotides>
                  <number_encoded_amino_acids>515</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FLQIQQAFAEKSIFIEQRKALSAENKEFRSAIDGKIKEMAPLHEALGQLRGSRNAGRERGPTVCSSEEELNHLIKGLQYRIQHESIPLNEEKQILREIKQLEGTREDVKKVAAARAQIHETMGEKESIQSQVKLMNVGLDGVRKGQQEVKGRLKIIDDQIDAINKQIGILDEELKDVVEKRDKTYEHILELRKQREEGNSSFYQNSNVLHKVKQLADQKDVGALKELSVTEVDKFISLWCGSKSFRDDYERRLLQSLDIRQLSRDGRMRNPDEKPLVLPEAPTVSRAEVPARANAKPVKEDHAPVDAAPIQKEQQEVSGKQLNDARGKNSKSTEKKAVVDDDEEIYGLDLHKDSKPKKIEIDEATLKEMKKEEEMAKNKQAMERKRKLAEKAAAKAAKKAQLEAEKKLKEREKKAKKKSGASAAGQEPIEEPTETPEEIAEEENAEETVETAVAPKVKARKENTIRHRATRARGSELPKAILKRKKATNYWLWAAAPAALAILVLLVIGYMYLQK*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0046G04.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28352" stop="28717"/>
                    <exon start="28831" stop="28872"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>405</number_coding_nucleotides>
                  <number_encoded_amino_acids>135</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NMGVEVEAKLVHVPVEAGTEQINLLKENGKPNHVSGITEPIKFGSHGTEEPKEEISRIPVSNVPKDAVEDWPEPKQVHSFYTVKFRRFDDPKLKARIELAEKELQKKNQARSQIIEKLKAKRIFTMCCCVELEVL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="26870" e_stop="26964"/>
            <exon e_start="28320" e_stop="28717"/>
            <exon e_start="29053" e_stop="29247"/>
            <exon e_start="29370" e_stop="29549"/>
            <exon e_start="29676" e_stop="29870"/>
            <exon e_start="30694" e_stop="30792"/>
            <exon e_start="30868" e_stop="31401"/>
            <exon e_start="31575" e_stop="32167"/>
            <exon e_start="33802" e_stop="33812"/>
            <exon e_start="34408" e_stop="34453"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.824" acc_prob="0.989" e_score="0.988"/>
          <exon-intron don_prob="0.996" acc_prob="0.998" e_score="0.972"/>
          <exon-intron don_prob="0.998" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.773" acc_prob="0.475" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.820" e_score="0.983"/>
          <exon-intron don_prob="0.769" acc_prob="0.879" e_score="0.545"/>
          <exon-only e_score="0.609"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="26870" e_stop="26964" e_length="95"/>
          </exon>
          <intron i_serial="1" don_prob="0.824" acc_prob="0.989">
            <gDNA_intron_boundary i_start="26965" i_stop="28319" i_length="1355"/>
          </intron>
          <exon e_serial="2" e_score="0.972">
            <gDNA_exon_boundary e_start="28320" e_stop="28717" e_length="398"/>
          </exon>
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          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31072" stop="31401"/>
              <exon start="31575" stop="32078"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734637" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31073" stop="31401"/>
              <exon start="31575" stop="31922"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339299" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31073" stop="31401"/>
              <exon start="31575" stop="31896"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347982" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31083" stop="31401"/>
              <exon start="31575" stop="31920"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343351" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31083" stop="31401"/>
              <exon start="31575" stop="31898"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343352" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31094" stop="31401"/>
              <exon start="31575" stop="31933"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339442" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31094" stop="31401"/>
              <exon start="31575" stop="31893"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344268" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31158" stop="31401"/>
              <exon start="31575" stop="31759"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268274" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31187" stop="31401"/>
              <exon start="31575" stop="32081"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E601613" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31196" stop="31401"/>
              <exon start="31575" stop="31973"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268299" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31217" stop="31401"/>
              <exon start="31575" stop="32115"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E585237" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31294" stop="31401"/>
              <exon start="31575" stop="32071"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610472" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31309" stop="31401"/>
              <exon start="31575" stop="31905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E580576" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31331" stop="31401"/>
              <exon start="31575" stop="32117"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291534" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31656" stop="32167"/>
              <exon start="33802" stop="33812"/>
              <exon start="34408" stop="34453"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E418897" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="5" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTGAAGAGGGGTCTGACTAGTTTCTTCTCTCAAAAAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGA : GATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG : GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT : ATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAA : CTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGG : AATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAG : GTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAG : GAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGCAGGTGGGGAGAGACAAAACAAAAAACAAAAACTTTGTTTTTAGTGTTTTAATTTTTTGTTTACAAATACTGCAATAGCAAGTACTGTTTAGTTTGATCATAACAATATTTCTTTTTCTTGCATCCTATATAGTTTAGGATGGAAAACTCATAAATGTTTTGCTGGTAGATGTGCGGCCTATCTTGAGATTACTTACTGGAGAGACAGTCTACATGTTTTTCTTTTGTTGCTGTAGTTGATATTATATTGACATTTTGCTTAATC : AGCTCGAACTT : GTACAAAAATTAGTCCTCCTCCACTATGCAAAAAAAAAAAAAAAAA</gDNA_template>
            <first_frame> L  K  R  G  L  T  S  F  F  S  Q  K  I  S  L  L  N  G  P  P  *  F  L  S  K  R  V  *  *  R  E  E :   I  R  D  F  S  V  C  I  S  L  K  Y  G  C  R  G  G  S  *  V  S  S  C  S  S  *  S  W  N  *  T  D  Q  S  S  E  R  K  W  K  A  E  S  C  F  R  D  Y  G  A  N  K  I  R  L  S  W  D  *  R  T  *  G  G  N  K  *  N  S  C  E  Q  C  S  K  G  C  G  *  G  L  A  *  T  *  A  G  P  F  V  L  Y  C  *  I  S  E  I  *  R  P  *  T  E  S  Q  N  *  T  G  *  K  R  A  T  E  K  E  P  S  *  I  S  D  H  *  K  I  E  G  Q  K   : G  *  K  I  N  F  H  *  T  K  E  S  P  Q  C  *  E  *  G  I  S  E  C  Y  *  W  *  D  K  G  N  G  T  S  A  *  G  F  G  P  A  P  R  F  *  E  C  R  P  R  E  G  S  Y  S  V  F  I  *  G  G  A  Q  S  S   : Y  Q  G  S  A  I  P  H  S  A  *  K  H  S  S  E  R  R  E  A  N  S  S  G  N  Q  T  T  *  R  N  K  G  R  C  *  K  G  C  C  C  K  S  T  D  S  *  D  D  G  *  K  R  I  N  P  E  S  G  Q   : T  Y  E  C  W  L  G  W  S  S  *  G  T  T  G  S  Q  G  Q  A  *  D  N  R  *  S  D  *  C  H  K  Q  T  D  R  Y  I  G  *  G  I  E  G  R  C  G  E  E  G  Q  D  L  *  T  Y  S  G  I  E  K  T  A  *  R  R   : E  F  F  F  L  S  K  L  Q  R  V  A  Q  S  E  T  T  C  *  P  K  G  C  W  S  P  *  R  A  F  S  Y  R   : G  R  Q  V  H  F  S  L  V  W  *  *  V  F  *  R  *  L  *  E  E  T  L  A  V  A  *  Y  *  A  A  E  Q  G  R  Q  D  E  E  S  *  *  K  A  T  G  V  T  R  S  T  Y  C  L  P  C  *  S  S  S  K  S  *  C  K  T  R  *  G  R  S  C  T  R  *  C  C  S  D  S  E  R  T  A  R  G  *  R  Q  A  A  E  *  C  S  W  *  K  L  K  K  H  R  E  K  S  C  C  *  *  *  *  G  N  L  W  F  G  P  T  Q  G  F  *  A  Q  E  N  R  N  *  *  G  N  T  E  G  D  E  E  R  G  G  D  G  K  K  *  T  G  Y  G  E  E  A  *  V  G  R  E  S  S  C  K  S  C  K  E  S  S  A  R  S  *  K  E  A  Q   : G  T  *  E  E  S  K  E  E  E  R  S  F  C  C  W  S  G  T  N  R  G  T  N  *  N  T  R  G  N  C  *  G  R  K  C  R  G  D  C  *  N  S  R  C  T  Q  G  Q  G  T  E  R  E  H  H  Q  A  Q  S  N  T  C  K  R  L  R  A  S  Q  S  Y  T  K  A  Q  E  S  N  K  L  L  A  M  G  S  C  S  C  C  T  R  D  S  G  T  S  S  H  R  I  H  V  S  S  K  V  E  R  G  R  W  G  E  T  K  Q  K  T  K  T  L  F  L  V  F  *  F  F  V  Y  K  Y  C  N  S  K  Y  C  L  V  *  S  *  Q  Y  F  F  F  L  H  P  I  *  F  R  M  E  N  S  *  M  F  C  W  *  M  C  G  L  S  *  D  Y  L  L  E  R  Q  S  T  C  F  S  F  V  A  V  V  D  I  I  L  T  F  C  L  I  :  S  S  N  L :   Y  K  N  *  S  S  S  T  M  Q  K  K  K  K  K </first_frame>
            <second_frame>  *  R  G  V  *  L  V  S  S  L  K  K  S  L  F  *  T  A  L  P  N  F  C  Q  K  G  Y  N  R  G  R   : R  S  G  T  S  R  F  V  F  H  *  N  M  G  V  E  V  E  A  K  L  V  H  V  P  V  E  A  G  T  E  Q  I  N  L  L  K  E  N  G  K  P  N  H  V  S  G  I  T  E  P  I  K  F  G  S  H  G  T  E  E  P  K  E  E  I  S  R  I  P  V  S  N  V  P  K  D  A  V  E  D  W  P  E  P  K  Q  V  H  S  F  Y  T  V  K  F  R  R  F  D  D  P  K  L  K  A  R  I  E  L  A  E  K  E  L  Q  K  K  N  Q  A  R  S  Q  I  I  E  K  L  K  A  K  R  :  A  E  K  S  I  F  I  E  Q  R  K  A  L  S  A  E  N  K  E  F  R  S  A  I  D  G  K  I  K  E  M  A  P  L  H  E  A  L  G  Q  L  R  G  S  R  N  A  G  R  E  R  G  P  T  V  C  S  S  E  E  E  L  N  H  L  :  I  K  G  L  Q  Y  R  I  Q  H  E  S  I  P  L  N  E  E  K  Q  I  L  R  E  I  K  Q  L  E  G  T  R  E  D  V  K  K  V  A  A  A  R  A  Q  I  H  E  T  M  G  E  K  E  S  I  Q  S  Q  V  K  :  L  M  N  V  G  L  D  G  V  R  K  G  Q  Q  E  V  K  G  R  L  K  I  I  D  D  Q  I  D  A  I  N  K  Q  I  G  I  L  D  E  E  L  K  D  V  V  E  K  R  D  K  T  Y  E  H  I  L  E  L  R  K  Q  R  E  E  G  :  N  S  S  F  Y  Q  N  S  N  V  L  H  K  V  K  Q  L  A  D  Q  K  D  V  G  A  L  K  E  L  S  V  T  E  :  V  D  K  F  I  S  L  W  C  G  S  K  S  F  R  D  D  Y  E  R  R  L  L  Q  S  L  D  I  R  Q  L  S  R  D  G  R  M  R  N  P  D  E  K  P  L  V  L  P  E  A  P  T  V  S  R  A  E  V  P  A  R  A  N  A  K  P  V  K  E  D  H  A  P  V  D  A  A  P  I  Q  K  E  Q  Q  E  V  S  G  K  Q  L  N  D  A  R  G  K  N  S  K  S  T  E  K  K  A  V  V  D  D  D  E  E  I  Y  G  L  D  L  H  K  D  S  K  P  K  K  I  E  I  D  E  A  T  L  K  E  M  K  K  E  E  E  M  A  K  N  K  Q  A  M  E  R  K  R  K  L  A  E  K  A  A  A  K  A  A  K  K  A  Q  L  E  A  E  K  K  L  K  :  E  R  E  K  K  A  K  K  K  S  G  A  S  A  A  G  Q  E  P  I  E  E  P  T  E  T  P  E  E  I  A  E  E  E  N  A  E  E  T  V  E  T  A  V  A  P  K  V  K  A  R  K  E  N  T  I  R  H  R  A  T  R  A  R  G  S  E  L  P  K  A  I  L  K  R  K  K  A  T  N  Y  W  L  W  A  A  A  P  A  A  L  A  I  L  V  L  L  V  I  G  Y  M  Y  L  Q  K  *  K  E  A  G  G  E  R  Q  N  K  K  Q  K  L  C  F  *  C  F  N  F  L  F  T  N  T  A  I  A  S  T  V  *  F  D  H  N  N  I  S  F  S  C  I  L  Y  S  L  G  W  K  T  H  K  C  F  A  G  R  C  A  A  Y  L  E  I  T  Y  W  R  D  S  L  H  V  F  L  L  L  L  *  L  I  L  Y  *  H  F  A  *  S :   A  R  T   : C  T  K  I  S  P  P  P  L  C  K  K  K  K  K   </second_frame>
            <third_frame>   E  E  G  S  D  *  F  L  L  S  K  N  L  S  F  E  R  P  S  L  I  F  V  K  K  G  I  I  E  G  G  :  D  Q  G  L  L  G  L  Y  F  I  E  I  W  V  *  R  W  K  L  S  *  F  M  F  Q  L  K  L  E  L  N  R  S  I  F  *  K  K  M  E  S  R  I  M  F  Q  G  L  R  S  Q  *  N  S  A  L  M  G  L  K  N  L  R  R  K  *  V  E  F  L  *  A  M  F  Q  R  M  R  L  R  I  G  L  N  L  S  R  S  I  R  S  I  L  L  N  F  G  D  L  T  T  L  N  *  K  P  E  L  N  W  L  K  K  S  Y  R  K  R  T  K  L  D  L  R  S  L  K  N  *  R  P  K  G :   L  K  N  Q  F  S  L  N  K  G  K  P  S  V  L  R  I  R  N  F  G  V  L  L  M  V  R  *  R  K  W  H  L  C  M  R  L  W  A  S  S  A  V  L  G  M  Q  A  E  R  G  V  L  Q  C  V  H  L  R  R  S  S  I  I  L :   S  R  V  C  N  T  A  F  S  M  K  A  F  L  *  T  K  R  S  K  F  F  G  K  S  N  N  L  K  E  Q  G  K  M  L  K  R  L  L  L  Q  E  H  R  F  M  R  R  W  V  K  K  N  Q  S  R  V  R  S  N :   L  *  M  L  A  W  M  E  F  V  R  D  N  R  K  S  R  A  G  L  R  *  *  M  I  R  L  M  P  *  T  N  R  S  V  Y  W  M  R  N  *  R  T  L  W  R  R  G  T  R  L  M  N  I  F  W  N  *  E  N  S  V  K  K  G :   I  L  L  S  I  K  T  P  T  C  C  T  K  *  N  N  L  L  T  K  R  M  L  E  P  L  K  S  F  Q  L  Q  R :   S  T  S  S  F  L  F  G  V  V  V  S  L  L  E  M  T  M  R  G  D  S  C  S  R  L  I  L  G  S  *  A  G  T  A  G  *  G  I  L  M  K  S  H  W  C  Y  Q  K  H  L  L  S  P  V  L  K  F  Q  Q  E  L  M  Q  N  P  L  R  K  I  M  H  P  L  M  L  L  R  F  R  K  N  S  K  R  L  A  A  S  S  *  M  M  L  V  V  K  T  Q  K  A  Q  R  K  K  L  L  L  M  M  M  R  K  S  M  V  W  T  Y  T  R  I  L  S  P  R  K  S  K  L  M  R  Q  H  *  R  R  *  R  K  R  R  R  W  Q  K  I  N  R  L  W  R  G  S  V  S  W  P  R  K  Q  L  Q  K  L  Q  R  K  L  S  *  K  L  K  R  S  S  R :   N  V  R  R  K  Q  R  R  R  A  E  L  L  L  L  V  R  N  Q  S  R  N  Q  L  K  H  P  R  K  L  L  R  K  K  M  Q  R  R  L  L  K  Q  P  L  H  P  R  S  R  H  G  K  R  T  P  S  G  T  E  Q  H  V  Q  E  A  P  S  F  P  K  L  Y  *  S  A  R  K  Q  Q  T  T  G  Y  G  Q  L  L  L  L  H  S  R  F  W  Y  F  *  S  S  D  T  C  I  F  K  S  R  K  R  Q  V  G  R  D  K  T  K  N  K  N  F  V  F  S  V  L  I  F  C  L  Q  I  L  Q  *  Q  V  L  F  S  L  I  I  T  I  F  L  F  L  A  S  Y  I  V  *  D  G  K  L  I  N  V  L  L  V  D  V  R  P  I  L  R  L  L  T  G  E  T  V  Y  M  F  F  F  C  C  C  S  *  Y  Y  I  D  I  L  L  N   : Q  L  E  L  :  V  Q  K  L  V  L  L  H  Y  A  K  K  K  K  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0046G04.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28352" stop="28717"/>
                    <exon start="29053" stop="29247"/>
                    <exon start="29370" stop="29549"/>
                    <exon start="29676" stop="29870"/>
                    <exon start="30694" stop="30792"/>
                    <exon start="30868" stop="31401"/>
                    <exon start="31575" stop="31895"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1887</number_coding_nucleotides>
                  <number_encoded_amino_acids>629</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NMGVEVEAKLVHVPVEAGTEQINLLKENGKPNHVSGITEPIKFGSHGTEEPKEEISRIPVSNVPKDAVEDWPEPKQVHSFYTVKFRRFDDPKLKARIELAEKELQKKNQARSQIIEKLKAKRAEKSIFIEQRKALSAENKEFRSAIDGKIKEMAPLHEALGQLRGSRNAGRERGPTVCSSEEELNHLIKGLQYRIQHESIPLNEEKQILREIKQLEGTREDVKKVAAARAQIHETMGEKESIQSQVKLMNVGLDGVRKGQQEVKGRLKIIDDQIDAINKQIGILDEELKDVVEKRDKTYEHILELRKQREEGNSSFYQNSNVLHKVKQLADQKDVGALKELSVTEVDKFISLWCGSKSFRDDYERRLLQSLDIRQLSRDGRMRNPDEKPLVLPEAPTVSRAEVPARANAKPVKEDHAPVDAAPIQKEQQEVSGKQLNDARGKNSKSTEKKAVVDDDEEIYGLDLHKDSKPKKIEIDEATLKEMKKEEEMAKNKQAMERKRKLAEKAAAKAAKKAQLEAEKKLKEREKKAKKKSGASAAGQEPIEEPTETPEEIAEEENAEETVETAVAPKVKARKENTIRHRATRARGSELPKAILKRKKATNYWLWAAAPAALAILVLLVIGYMYLQK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
          <exon_coordinates>
            <exon e_start="27042" e_stop="27115"/>
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              <exon start="31575" stop="31614"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339769" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31003" stop="31401"/>
              <exon start="31575" stop="31609"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311009" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31010" stop="31401"/>
              <exon start="31575" stop="31972"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E728841" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31059" stop="31401"/>
              <exon start="31575" stop="31783"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396994" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31060" stop="31401"/>
              <exon start="31575" stop="31681"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281645" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31072" stop="31401"/>
              <exon start="31575" stop="32078"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734637" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31073" stop="31401"/>
              <exon start="31575" stop="31922"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339299" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31073" stop="31401"/>
              <exon start="31575" stop="31896"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347982" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31083" stop="31401"/>
              <exon start="31575" stop="31920"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343351" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31083" stop="31401"/>
              <exon start="31575" stop="31898"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343352" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31094" stop="31401"/>
              <exon start="31575" stop="31933"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339442" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31094" stop="31401"/>
              <exon start="31575" stop="31893"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344268" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31158" stop="31401"/>
              <exon start="31575" stop="31759"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268274" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31187" stop="31401"/>
              <exon start="31575" stop="32081"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E601613" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31196" stop="31401"/>
              <exon start="31575" stop="31973"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268299" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31217" stop="31401"/>
              <exon start="31575" stop="32115"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E585237" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31294" stop="31401"/>
              <exon start="31575" stop="32071"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610472" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31309" stop="31401"/>
              <exon start="31575" stop="31905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E580576" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31331" stop="31401"/>
              <exon start="31575" stop="32117"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291534" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31656" stop="32167"/>
              <exon start="33802" stop="33812"/>
              <exon start="34408" stop="34453"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E418897" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="6" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTGTTTCTTCTTAGTTTAACTATTTATTTTTTGGGGGTTTCTTTTCGATCTGTACTGATCTTGATATTTTTTAG : GATCAGGGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG : GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT : ATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAA : CTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGG : AATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAG : GTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAG : GAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGCAGGTGGGGAGAGACAAAACAAAAAACAAAAACTTTGTTTTTAGTGTTTTAATTTTTTGTTTACAAATACTGCAATAGCAAGTACTGTTTAGTTTGATCATAACAATATTTCTTTTTCTTGCATCCTATATAGTTTAGGATGGAAAACTCATAAATGTTTTGCTGGTAGATGTGCGGCCTATCTTGAGATTACTTACTGGAGAGACAGTCTACATGTTTTTCTTTTGTTGCTGTAGTTGATATTATATTGACATTTTGCTTAATC : AGCTCGAACTT : GTACAAAAATTAGTCCTCCTCCACTATGCAAAAAAAAAAAAAAAAA</gDNA_template>
            <first_frame> L  F  L  L  S  L  T  I  Y  F  L  G  V  S  F  R  S  V  L  I  L  I  F  F  R :   I  R  D  F  S  V  C  I  S  L  K  Y  G  C  R  G  G  S  *  V  S  S  C  S  S  *  S  W  N  *  T  D  Q  S  S  E  R  K  W  K  A  E  S  C  F  R  D  Y  G  A  N  K  I  R  L  S  W  D  *  R  T  *  G  G  N  K  *  N  S  C  E  Q  C  S  K  G  C  G  *  G  L  A  *  T  *  A  G  P  F  V  L  Y  C  *  I  S  E  I  *  R  P  *  T  E  S  Q  N  *  T  G  *  K  R  A  T  E  K  E  P  S  *  I  S  D  H  *  K  I  E  G  Q  K   : G  *  K  I  N  F  H  *  T  K  E  S  P  Q  C  *  E  *  G  I  S  E  C  Y  *  W  *  D  K  G  N  G  T  S  A  *  G  F  G  P  A  P  R  F  *  E  C  R  P  R  E  G  S  Y  S  V  F  I  *  G  G  A  Q  S  S   : Y  Q  G  S  A  I  P  H  S  A  *  K  H  S  S  E  R  R  E  A  N  S  S  G  N  Q  T  T  *  R  N  K  G  R  C  *  K  G  C  C  C  K  S  T  D  S  *  D  D  G  *  K  R  I  N  P  E  S  G  Q   : T  Y  E  C  W  L  G  W  S  S  *  G  T  T  G  S  Q  G  Q  A  *  D  N  R  *  S  D  *  C  H  K  Q  T  D  R  Y  I  G  *  G  I  E  G  R  C  G  E  E  G  Q  D  L  *  T  Y  S  G  I  E  K  T  A  *  R  R   : E  F  F  F  L  S  K  L  Q  R  V  A  Q  S  E  T  T  C  *  P  K  G  C  W  S  P  *  R  A  F  S  Y  R   : G  R  Q  V  H  F  S  L  V  W  *  *  V  F  *  R  *  L  *  E  E  T  L  A  V  A  *  Y  *  A  A  E  Q  G  R  Q  D  E  E  S  *  *  K  A  T  G  V  T  R  S  T  Y  C  L  P  C  *  S  S  S  K  S  *  C  K  T  R  *  G  R  S  C  T  R  *  C  C  S  D  S  E  R  T  A  R  G  *  R  Q  A  A  E  *  C  S  W  *  K  L  K  K  H  R  E  K  S  C  C  *  *  *  *  G  N  L  W  F  G  P  T  Q  G  F  *  A  Q  E  N  R  N  *  *  G  N  T  E  G  D  E  E  R  G  G  D  G  K  K  *  T  G  Y  G  E  E  A  *  V  G  R  E  S  S  C  K  S  C  K  E  S  S  A  R  S  *  K  E  A  Q   : G  T  *  E  E  S  K  E  E  E  R  S  F  C  C  W  S  G  T  N  R  G  T  N  *  N  T  R  G  N  C  *  G  R  K  C  R  G  D  C  *  N  S  R  C  T  Q  G  Q  G  T  E  R  E  H  H  Q  A  Q  S  N  T  C  K  R  L  R  A  S  Q  S  Y  T  K  A  Q  E  S  N  K  L  L  A  M  G  S  C  S  C  C  T  R  D  S  G  T  S  S  H  R  I  H  V  S  S  K  V  E  R  G  R  W  G  E  T  K  Q  K  T  K  T  L  F  L  V  F  *  F  F  V  Y  K  Y  C  N  S  K  Y  C  L  V  *  S  *  Q  Y  F  F  F  L  H  P  I  *  F  R  M  E  N  S  *  M  F  C  W  *  M  C  G  L  S  *  D  Y  L  L  E  R  Q  S  T  C  F  S  F  V  A  V  V  D  I  I  L  T  F  C  L  I  :  S  S  N  L :   Y  K  N  *  S  S  S  T  M  Q  K  K  K  K  K </first_frame>
            <second_frame>  C  F  F  L  V  *  L  F  I  F  W  G  F  L  F  D  L  Y  *  S  *  Y  F  L   : G  S  G  T  S  R  F  V  F  H  *  N  M  G  V  E  V  E  A  K  L  V  H  V  P  V  E  A  G  T  E  Q  I  N  L  L  K  E  N  G  K  P  N  H  V  S  G  I  T  E  P  I  K  F  G  S  H  G  T  E  E  P  K  E  E  I  S  R  I  P  V  S  N  V  P  K  D  A  V  E  D  W  P  E  P  K  Q  V  H  S  F  Y  T  V  K  F  R  R  F  D  D  P  K  L  K  A  R  I  E  L  A  E  K  E  L  Q  K  K  N  Q  A  R  S  Q  I  I  E  K  L  K  A  K  R  :  A  E  K  S  I  F  I  E  Q  R  K  A  L  S  A  E  N  K  E  F  R  S  A  I  D  G  K  I  K  E  M  A  P  L  H  E  A  L  G  Q  L  R  G  S  R  N  A  G  R  E  R  G  P  T  V  C  S  S  E  E  E  L  N  H  L  :  I  K  G  L  Q  Y  R  I  Q  H  E  S  I  P  L  N  E  E  K  Q  I  L  R  E  I  K  Q  L  E  G  T  R  E  D  V  K  K  V  A  A  A  R  A  Q  I  H  E  T  M  G  E  K  E  S  I  Q  S  Q  V  K  :  L  M  N  V  G  L  D  G  V  R  K  G  Q  Q  E  V  K  G  R  L  K  I  I  D  D  Q  I  D  A  I  N  K  Q  I  G  I  L  D  E  E  L  K  D  V  V  E  K  R  D  K  T  Y  E  H  I  L  E  L  R  K  Q  R  E  E  G  :  N  S  S  F  Y  Q  N  S  N  V  L  H  K  V  K  Q  L  A  D  Q  K  D  V  G  A  L  K  E  L  S  V  T  E  :  V  D  K  F  I  S  L  W  C  G  S  K  S  F  R  D  D  Y  E  R  R  L  L  Q  S  L  D  I  R  Q  L  S  R  D  G  R  M  R  N  P  D  E  K  P  L  V  L  P  E  A  P  T  V  S  R  A  E  V  P  A  R  A  N  A  K  P  V  K  E  D  H  A  P  V  D  A  A  P  I  Q  K  E  Q  Q  E  V  S  G  K  Q  L  N  D  A  R  G  K  N  S  K  S  T  E  K  K  A  V  V  D  D  D  E  E  I  Y  G  L  D  L  H  K  D  S  K  P  K  K  I  E  I  D  E  A  T  L  K  E  M  K  K  E  E  E  M  A  K  N  K  Q  A  M  E  R  K  R  K  L  A  E  K  A  A  A  K  A  A  K  K  A  Q  L  E  A  E  K  K  L  K  :  E  R  E  K  K  A  K  K  K  S  G  A  S  A  A  G  Q  E  P  I  E  E  P  T  E  T  P  E  E  I  A  E  E  E  N  A  E  E  T  V  E  T  A  V  A  P  K  V  K  A  R  K  E  N  T  I  R  H  R  A  T  R  A  R  G  S  E  L  P  K  A  I  L  K  R  K  K  A  T  N  Y  W  L  W  A  A  A  P  A  A  L  A  I  L  V  L  L  V  I  G  Y  M  Y  L  Q  K  *  K  E  A  G  G  E  R  Q  N  K  K  Q  K  L  C  F  *  C  F  N  F  L  F  T  N  T  A  I  A  S  T  V  *  F  D  H  N  N  I  S  F  S  C  I  L  Y  S  L  G  W  K  T  H  K  C  F  A  G  R  C  A  A  Y  L  E  I  T  Y  W  R  D  S  L  H  V  F  L  L  L  L  *  L  I  L  Y  *  H  F  A  *  S :   A  R  T   : C  T  K  I  S  P  P  P  L  C  K  K  K  K  K   </second_frame>
            <third_frame>   V  S  S  *  F  N  Y  L  F  F  G  G  F  F  S  I  C  T  D  L  D  I  F  *  :  D  Q  G  L  L  G  L  Y  F  I  E  I  W  V  *  R  W  K  L  S  *  F  M  F  Q  L  K  L  E  L  N  R  S  I  F  *  K  K  M  E  S  R  I  M  F  Q  G  L  R  S  Q  *  N  S  A  L  M  G  L  K  N  L  R  R  K  *  V  E  F  L  *  A  M  F  Q  R  M  R  L  R  I  G  L  N  L  S  R  S  I  R  S  I  L  L  N  F  G  D  L  T  T  L  N  *  K  P  E  L  N  W  L  K  K  S  Y  R  K  R  T  K  L  D  L  R  S  L  K  N  *  R  P  K  G :   L  K  N  Q  F  S  L  N  K  G  K  P  S  V  L  R  I  R  N  F  G  V  L  L  M  V  R  *  R  K  W  H  L  C  M  R  L  W  A  S  S  A  V  L  G  M  Q  A  E  R  G  V  L  Q  C  V  H  L  R  R  S  S  I  I  L :   S  R  V  C  N  T  A  F  S  M  K  A  F  L  *  T  K  R  S  K  F  F  G  K  S  N  N  L  K  E  Q  G  K  M  L  K  R  L  L  L  Q  E  H  R  F  M  R  R  W  V  K  K  N  Q  S  R  V  R  S  N :   L  *  M  L  A  W  M  E  F  V  R  D  N  R  K  S  R  A  G  L  R  *  *  M  I  R  L  M  P  *  T  N  R  S  V  Y  W  M  R  N  *  R  T  L  W  R  R  G  T  R  L  M  N  I  F  W  N  *  E  N  S  V  K  K  G :   I  L  L  S  I  K  T  P  T  C  C  T  K  *  N  N  L  L  T  K  R  M  L  E  P  L  K  S  F  Q  L  Q  R :   S  T  S  S  F  L  F  G  V  V  V  S  L  L  E  M  T  M  R  G  D  S  C  S  R  L  I  L  G  S  *  A  G  T  A  G  *  G  I  L  M  K  S  H  W  C  Y  Q  K  H  L  L  S  P  V  L  K  F  Q  Q  E  L  M  Q  N  P  L  R  K  I  M  H  P  L  M  L  L  R  F  R  K  N  S  K  R  L  A  A  S  S  *  M  M  L  V  V  K  T  Q  K  A  Q  R  K  K  L  L  L  M  M  M  R  K  S  M  V  W  T  Y  T  R  I  L  S  P  R  K  S  K  L  M  R  Q  H  *  R  R  *  R  K  R  R  R  W  Q  K  I  N  R  L  W  R  G  S  V  S  W  P  R  K  Q  L  Q  K  L  Q  R  K  L  S  *  K  L  K  R  S  S  R :   N  V  R  R  K  Q  R  R  R  A  E  L  L  L  L  V  R  N  Q  S  R  N  Q  L  K  H  P  R  K  L  L  R  K  K  M  Q  R  R  L  L  K  Q  P  L  H  P  R  S  R  H  G  K  R  T  P  S  G  T  E  Q  H  V  Q  E  A  P  S  F  P  K  L  Y  *  S  A  R  K  Q  Q  T  T  G  Y  G  Q  L  L  L  L  H  S  R  F  W  Y  F  *  S  S  D  T  C  I  F  K  S  R  K  R  Q  V  G  R  D  K  T  K  N  K  N  F  V  F  S  V  L  I  F  C  L  Q  I  L  Q  *  Q  V  L  F  S  L  I  I  T  I  F  L  F  L  A  S  Y  I  V  *  D  G  K  L  I  N  V  L  L  V  D  V  R  P  I  L  R  L  L  T  G  E  T  V  Y  M  F  F  F  C  C  C  S  *  Y  Y  I  D  I  L  L  N   : Q  L  E  L  :  V  Q  K  L  V  L  L  H  Y  A  K  K  K  K  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0046G04.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="6" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28352" stop="28717"/>
                    <exon start="29053" stop="29247"/>
                    <exon start="29370" stop="29549"/>
                    <exon start="29676" stop="29870"/>
                    <exon start="30694" stop="30792"/>
                    <exon start="30868" stop="31401"/>
                    <exon start="31575" stop="31895"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1887</number_coding_nucleotides>
                  <number_encoded_amino_acids>629</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NMGVEVEAKLVHVPVEAGTEQINLLKENGKPNHVSGITEPIKFGSHGTEEPKEEISRIPVSNVPKDAVEDWPEPKQVHSFYTVKFRRFDDPKLKARIELAEKELQKKNQARSQIIEKLKAKRAEKSIFIEQRKALSAENKEFRSAIDGKIKEMAPLHEALGQLRGSRNAGRERGPTVCSSEEELNHLIKGLQYRIQHESIPLNEEKQILREIKQLEGTREDVKKVAAARAQIHETMGEKESIQSQVKLMNVGLDGVRKGQQEVKGRLKIIDDQIDAINKQIGILDEELKDVVEKRDKTYEHILELRKQREEGNSSFYQNSNVLHKVKQLADQKDVGALKELSVTEVDKFISLWCGSKSFRDDYERRLLQSLDIRQLSRDGRMRNPDEKPLVLPEAPTVSRAEVPARANAKPVKEDHAPVDAAPIQKEQQEVSGKQLNDARGKNSKSTEKKAVVDDDEEIYGLDLHKDSKPKKIEIDEATLKEMKKEEEMAKNKQAMERKRKLAEKAAAKAAKKAQLEAEKKLKEREKKAKKKSGASAAGQEPIEEPTETPEEIAEEENAEETVETAVAPKVKARKENTIRHRATRARGSELPKAILKRKKATNYWLWAAAPAALAILVLLVIGYMYLQK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="7">
          <exon_coordinates>
            <exon e_start="26904" e_stop="27012"/>
            <exon e_start="28326" e_stop="28717"/>
            <exon e_start="29053" e_stop="29247"/>
            <exon e_start="29370" e_stop="29549"/>
            <exon e_start="29676" e_stop="29870"/>
            <exon e_start="30694" e_stop="30792"/>
            <exon e_start="30868" e_stop="31401"/>
            <exon e_start="31575" e_stop="32167"/>
            <exon e_start="33802" e_stop="33812"/>
            <exon e_start="34408" e_stop="34453"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.932" acc_prob="0.841" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.998" e_score="0.965"/>
          <exon-intron don_prob="0.998" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.773" acc_prob="0.475" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.820" e_score="0.983"/>
          <exon-intron don_prob="0.769" acc_prob="0.879" e_score="0.545"/>
          <exon-only e_score="0.609"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="26904" e_stop="27012" e_length="109"/>
          </exon>
          <intron i_serial="1" don_prob="0.932" acc_prob="0.841">
            <gDNA_intron_boundary i_start="27013" i_stop="28325" i_length="1313"/>
          </intron>
          <exon e_serial="2" e_score="0.965">
            <gDNA_exon_boundary e_start="28326" e_stop="28717" e_length="392"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.998">
            <gDNA_intron_boundary i_start="28718" i_stop="29052" i_length="335"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="29053" e_stop="29247" e_length="195"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.991">
            <gDNA_intron_boundary i_start="29248" i_stop="29369" i_length="122"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="29370" e_stop="29549" e_length="180"/>
          </exon>
          <intron i_serial="4" don_prob="0.985" acc_prob="0.997">
            <gDNA_intron_boundary i_start="29550" i_stop="29675" i_length="126"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="29676" e_stop="29870" e_length="195"/>
          </exon>
          <intron i_serial="5" don_prob="0.773" acc_prob="0.475">
            <gDNA_intron_boundary i_start="29871" i_stop="30693" i_length="823"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="30694" e_stop="30792" e_length="99"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.967">
            <gDNA_intron_boundary i_start="30793" i_stop="30867" i_length="75"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="30868" e_stop="31401" e_length="534"/>
          </exon>
          <intron i_serial="7" don_prob="0.998" acc_prob="0.981">
            <gDNA_intron_boundary i_start="31402" i_stop="31574" i_length="173"/>
          </intron>
          <exon e_serial="8" e_score="0.983">
            <gDNA_exon_boundary e_start="31575" e_stop="32167" e_length="593"/>
          </exon>
          <intron i_serial="8" don_prob="0.000" acc_prob="0.820">
            <gDNA_intron_boundary i_start="32168" i_stop="33801" i_length="1634"/>
          </intron>
          <exon e_serial="9" e_score="0.545">
            <gDNA_exon_boundary e_start="33802" e_stop="33812" e_length="11"/>
          </exon>
          <intron i_serial="9" don_prob="0.769" acc_prob="0.879">
            <gDNA_intron_boundary i_start="33813" i_stop="34407" i_length="595"/>
          </intron>
          <exon e_serial="10" e_score="0.609">
            <gDNA_exon_boundary e_start="34408" e_stop="34453" e_length="46"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26904" stop="27012"/>
              <exon start="28326" stop="28635"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267783" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28342" stop="28717"/>
              <exon start="29053" stop="29247"/>
              <exon start="29370" stop="29400"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E469019" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28368" stop="28698"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338124" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28388" stop="28717"/>
              <exon start="29053" stop="29183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404506" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28459" stop="28717"/>
              <exon start="29053" stop="29247"/>
              <exon start="29370" stop="29472"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E326033" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28459" stop="28717"/>
              <exon start="29053" stop="29247"/>
              <exon start="29370" stop="29416"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E326032" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28541" stop="28717"/>
              <exon start="29053" stop="29247"/>
              <exon start="29370" stop="29549"/>
              <exon start="29676" stop="29870"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E590556" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28566" stop="28717"/>
              <exon start="29053" stop="29247"/>
              <exon start="29370" stop="29477"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269528" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28585" stop="28717"/>
              <exon start="29053" stop="29247"/>
              <exon start="29370" stop="29549"/>
              <exon start="29676" stop="29756"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329542" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28622" stop="28717"/>
              <exon start="29053" stop="29247"/>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E479343" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29068" stop="29247"/>
              <exon start="29370" stop="29549"/>
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              <exon start="30694" stop="30788"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262048" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29068" stop="29247"/>
              <exon start="29370" stop="29549"/>
              <exon start="29676" stop="29777"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257689" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29077" stop="29247"/>
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              <exon start="29676" stop="29870"/>
              <exon start="30694" stop="30762"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E440829" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29080" stop="29247"/>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E708007" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29081" stop="29247"/>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E702409" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29081" stop="29247"/>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577398" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29104" stop="29247"/>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E451181" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E585043" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29162" stop="29247"/>
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              <exon start="30868" stop="30888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482313" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E478689" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29203" stop="29247"/>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E450805" strand="+"/>
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          <PGS_line>
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          <PGS_line>
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          <PGS_line>
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          <PGS_line>
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          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31003" stop="31401"/>
              <exon start="31575" stop="31609"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311009" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31010" stop="31401"/>
              <exon start="31575" stop="31972"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E728841" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31059" stop="31401"/>
              <exon start="31575" stop="31783"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396994" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31060" stop="31401"/>
              <exon start="31575" stop="31681"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281645" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31072" stop="31401"/>
              <exon start="31575" stop="32078"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734637" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31073" stop="31401"/>
              <exon start="31575" stop="31922"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339299" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31073" stop="31401"/>
              <exon start="31575" stop="31896"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347982" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31083" stop="31401"/>
              <exon start="31575" stop="31920"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343351" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31083" stop="31401"/>
              <exon start="31575" stop="31898"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343352" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31094" stop="31401"/>
              <exon start="31575" stop="31933"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339442" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31094" stop="31401"/>
              <exon start="31575" stop="31893"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344268" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31158" stop="31401"/>
              <exon start="31575" stop="31759"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268274" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31187" stop="31401"/>
              <exon start="31575" stop="32081"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E601613" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31196" stop="31401"/>
              <exon start="31575" stop="31973"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268299" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31217" stop="31401"/>
              <exon start="31575" stop="32115"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E585237" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31294" stop="31401"/>
              <exon start="31575" stop="32071"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610472" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31309" stop="31401"/>
              <exon start="31575" stop="31905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E580576" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31331" stop="31401"/>
              <exon start="31575" stop="32117"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291534" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31656" stop="32167"/>
              <exon start="33802" stop="33812"/>
              <exon start="34408" stop="34453"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E418897" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="7" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAATCTCTCTTTTGAACGGCCCTCCCTAATTTTTGTCAAAAAGGGTATAATAGAGGGAGGAGTAACAGTCTTTTCTCTAAATCTCTGCATTTAGTTTTTGCTGTACTCA : GGACTTCTCGGTTTGTATTTCATTGAAATATGGGTGTAGAGGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAACTGAACAGATCAATCTTCTGAAAGAAAATGGAAAGCCGAATCATGTTTCAGGGATTACGGAGCCAATAAAATTCGGCTCTCATGGGACTGAAGAACCTAAGGAGGAAATAAGTAGAATTCCTGTGAGCAATGTTCCAAAGGATGCGGTTGAGGATTGGCCTGAACCTAAGCAGGTCCATTCGTTCTATACTGTTAAATTTCGGAGATTTGACGACCCTAAACTGAAAGCCAGAATTGAACTGGCTGAAAAAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATCATTGAAAAATTGAAGGCCAAAAGG : GCTGAAAAATCAATTTTCATTGAACAAAGGAAAGCCCTCAGTGCTGAGAATAAGGAATTTCGGAGTGCTATTGATGGTAAGATAAAGGAAATGGCACCTCTGCATGAGGCTTTGGGCCAGCTCCGCGGTTCTAGGAATGCAGGCCGAGAGAGGGGTCCTACAGTGTGTTCATCTGAGGAGGAGCTCAATCATCTT : ATCAAGGGTCTGCAATACCGCATTCAGCATGAAAGCATTCCTCTGAACGAAGAGAAGCAAATTCTTCGGGAAATCAAACAACTTGAAGGAACAAGGGAAGATGTTAAAAAGGTTGCTGCTGCAAGAGCACAGATTCATGAGACGATGGGTGAAAAAGAATCAATCCAGAGTCAGGTCAAA : CTTATGAATGTTGGCTTGGATGGAGTTCGTAAGGGACAACAGGAAGTCAAGGGCAGGCTTAAGATAATAGATGATCAGATTGATGCCATAAACAAACAGATCGGTATATTGGATGAGGAATTGAAGGACGTTGTGGAGAAGAGGGACAAGACTTATGAACATATTCTGGAATTGAGAAAACAGCGTGAAGAAGGG : AATTCTTCTTTCTATCAAAACTCCAACGTGTTGCACAAAGTGAAACAACTTGCTGACCAAAAGGATGTTGGAGCCCTTAAAGAGCTTTCAGTTACAGAG : GTCGACAAGTTCATTTCTCTTTGGTGTGGTAGTAAGTCTTTTAGAGATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATTAGGCAGCTGAGCAGGGACGGCAGGATGAGGAATCCTGATGAAAAGCCACTGGTGTTACCAGAAGCACCTACTGTCTCCCGTGCTGAAGTTCCAGCAAGAGCTAATGCAAAACCCGTTAAGGAAGATCATGCACCCGTTGATGCTGCTCCGATTCAGAAAGAACAGCAAGAGGTTAGCGGCAAGCAGCTGAATGATGCTCGTGGTAAAAACTCAAAAAGCACAGAGAAAAAAGCTGTTGTTGATGATGATGAGGAAATCTATGGTTTGGACCTACACAAGGATTCTAAGCCCAAGAAAATCGAAATTGATGAGGCAACACTGAAGGAGATGAAGAAAGAGGAGGAGATGGCAAAAAATAAACAGGCTATGGAGAGGAAGCGTAAGTTGGCCGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAAAAGAAGCTCAAG : GAACGTGAGAAGAAAGCAAAGAAGAAGAGCGGAGCTTCTGCTGCTGGTCAGGAACCAATCGAGGAACCAACTGAAACACCCGAGGAAATTGCTGAGGAAGAAAATGCAGAGGAGACTGTTGAAACAGCCGTTGCACCCAAGGTCAAGGCACGGAAAGAGAACACCATCAGGCACAGAGCAACACGTGCAAGAGGCTCCGAGCTTCCCAAAGCTATACTAAAGCGCAAGAAAGCAACAAACTACTGGCTATGGGCAGCTGCTCCTGCTGCACTCGCGATTCTGGTACTTCTAGTCATCGGATACATGTATCTTCAAAAGTAGAAAGAGGCAGGTGGGGAGAGACAAAACAAAAAACAAAAACTTTGTTTTTAGTGTTTTAATTTTTTGTTTACAAATACTGCAATAGCAAGTACTGTTTAGTTTGATCATAACAATATTTCTTTTTCTTGCATCCTATATAGTTTAGGATGGAAAACTCATAAATGTTTTGCTGGTAGATGTGCGGCCTATCTTGAGATTACTTACTGGAGAGACAGTCTACATGTTTTTCTTTTGTTGCTGTAGTTGATATTATATTGACATTTTGCTTAATC : AGCTCGAACTT : GTACAAAAATTAGTCCTCCTCCACTATGCAAAAAAAAAAAAAAAAA</gDNA_template>
            <first_frame> K  S  L  F  *  T  A  L  P  N  F  C  Q  K  G  Y  N  R  G  R  S  N  S  L  F  S  K  S  L  H  L  V  F  A  V  L   : R  T  S  R  F  V  F  H  *  N  M  G  V  E  V  E  A  K  L  V  H  V  P  V  E  A  G  T  E  Q  I  N  L  L  K  E  N  G  K  P  N  H  V  S  G  I  T  E  P  I  K  F  G  S  H  G  T  E  E  P  K  E  E  I  S  R  I  P  V  S  N  V  P  K  D  A  V  E  D  W  P  E  P  K  Q  V  H  S  F  Y  T  V  K  F  R  R  F  D  D  P  K  L  K  A  R  I  E  L  A  E  K  E  L  Q  K  K  N  Q  A  R  S  Q  I  I  E  K  L  K  A  K  R  :  A  E  K  S  I  F  I  E  Q  R  K  A  L  S  A  E  N  K  E  F  R  S  A  I  D  G  K  I  K  E  M  A  P  L  H  E  A  L  G  Q  L  R  G  S  R  N  A  G  R  E  R  G  P  T  V  C  S  S  E  E  E  L  N  H  L  :  I  K  G  L  Q  Y  R  I  Q  H  E  S  I  P  L  N  E  E  K  Q  I  L  R  E  I  K  Q  L  E  G  T  R  E  D  V  K  K  V  A  A  A  R  A  Q  I  H  E  T  M  G  E  K  E  S  I  Q  S  Q  V  K  :  L  M  N  V  G  L  D  G  V  R  K  G  Q  Q  E  V  K  G  R  L  K  I  I  D  D  Q  I  D  A  I  N  K  Q  I  G  I  L  D  E  E  L  K  D  V  V  E  K  R  D  K  T  Y  E  H  I  L  E  L  R  K  Q  R  E  E  G  :  N  S  S  F  Y  Q  N  S  N  V  L  H  K  V  K  Q  L  A  D  Q  K  D  V  G  A  L  K  E  L  S  V  T  E  :  V  D  K  F  I  S  L  W  C  G  S  K  S  F  R  D  D  Y  E  R  R  L  L  Q  S  L  D  I  R  Q  L  S  R  D  G  R  M  R  N  P  D  E  K  P  L  V  L  P  E  A  P  T  V  S  R  A  E  V  P  A  R  A  N  A  K  P  V  K  E  D  H  A  P  V  D  A  A  P  I  Q  K  E  Q  Q  E  V  S  G  K  Q  L  N  D  A  R  G  K  N  S  K  S  T  E  K  K  A  V  V  D  D  D  E  E  I  Y  G  L  D  L  H  K  D  S  K  P  K  K  I  E  I  D  E  A  T  L  K  E  M  K  K  E  E  E  M  A  K  N  K  Q  A  M  E  R  K  R  K  L  A  E  K  A  A  A  K  A  A  K  K  A  Q  L  E  A  E  K  K  L  K  :  E  R  E  K  K  A  K  K  K  S  G  A  S  A  A  G  Q  E  P  I  E  E  P  T  E  T  P  E  E  I  A  E  E  E  N  A  E  E  T  V  E  T  A  V  A  P  K  V  K  A  R  K  E  N  T  I  R  H  R  A  T  R  A  R  G  S  E  L  P  K  A  I  L  K  R  K  K  A  T  N  Y  W  L  W  A  A  A  P  A  A  L  A  I  L  V  L  L  V  I  G  Y  M  Y  L  Q  K  *  K  E  A  G  G  E  R  Q  N  K  K  Q  K  L  C  F  *  C  F  N  F  L  F  T  N  T  A  I  A  S  T  V  *  F  D  H  N  N  I  S  F  S  C  I  L  Y  S  L  G  W  K  T  H  K  C  F  A  G  R  C  A  A  Y  L  E  I  T  Y  W  R  D  S  L  H  V  F  L  L  L  L  *  L  I  L  Y  *  H  F  A  *  S :   A  R  T   : C  T  K  I  S  P  P  P  L  C  K  K  K  K  K   </first_frame>
            <second_frame>  N  L  S  F  E  R  P  S  L  I  F  V  K  K  G  I  I  E  G  G  V  T  V  F  S  L  N  L  C  I  *  F  L  L  Y  S  :  G  L  L  G  L  Y  F  I  E  I  W  V  *  R  W  K  L  S  *  F  M  F  Q  L  K  L  E  L  N  R  S  I  F  *  K  K  M  E  S  R  I  M  F  Q  G  L  R  S  Q  *  N  S  A  L  M  G  L  K  N  L  R  R  K  *  V  E  F  L  *  A  M  F  Q  R  M  R  L  R  I  G  L  N  L  S  R  S  I  R  S  I  L  L  N  F  G  D  L  T  T  L  N  *  K  P  E  L  N  W  L  K  K  S  Y  R  K  R  T  K  L  D  L  R  S  L  K  N  *  R  P  K  G :   L  K  N  Q  F  S  L  N  K  G  K  P  S  V  L  R  I  R  N  F  G  V  L  L  M  V  R  *  R  K  W  H  L  C  M  R  L  W  A  S  S  A  V  L  G  M  Q  A  E  R  G  V  L  Q  C  V  H  L  R  R  S  S  I  I  L :   S  R  V  C  N  T  A  F  S  M  K  A  F  L  *  T  K  R  S  K  F  F  G  K  S  N  N  L  K  E  Q  G  K  M  L  K  R  L  L  L  Q  E  H  R  F  M  R  R  W  V  K  K  N  Q  S  R  V  R  S  N :   L  *  M  L  A  W  M  E  F  V  R  D  N  R  K  S  R  A  G  L  R  *  *  M  I  R  L  M  P  *  T  N  R  S  V  Y  W  M  R  N  *  R  T  L  W  R  R  G  T  R  L  M  N  I  F  W  N  *  E  N  S  V  K  K  G :   I  L  L  S  I  K  T  P  T  C  C  T  K  *  N  N  L  L  T  K  R  M  L  E  P  L  K  S  F  Q  L  Q  R :   S  T  S  S  F  L  F  G  V  V  V  S  L  L  E  M  T  M  R  G  D  S  C  S  R  L  I  L  G  S  *  A  G  T  A  G  *  G  I  L  M  K  S  H  W  C  Y  Q  K  H  L  L  S  P  V  L  K  F  Q  Q  E  L  M  Q  N  P  L  R  K  I  M  H  P  L  M  L  L  R  F  R  K  N  S  K  R  L  A  A  S  S  *  M  M  L  V  V  K  T  Q  K  A  Q  R  K  K  L  L  L  M  M  M  R  K  S  M  V  W  T  Y  T  R  I  L  S  P  R  K  S  K  L  M  R  Q  H  *  R  R  *  R  K  R  R  R  W  Q  K  I  N  R  L  W  R  G  S  V  S  W  P  R  K  Q  L  Q  K  L  Q  R  K  L  S  *  K  L  K  R  S  S  R :   N  V  R  R  K  Q  R  R  R  A  E  L  L  L  L  V  R  N  Q  S  R  N  Q  L  K  H  P  R  K  L  L  R  K  K  M  Q  R  R  L  L  K  Q  P  L  H  P  R  S  R  H  G  K  R  T  P  S  G  T  E  Q  H  V  Q  E  A  P  S  F  P  K  L  Y  *  S  A  R  K  Q  Q  T  T  G  Y  G  Q  L  L  L  L  H  S  R  F  W  Y  F  *  S  S  D  T  C  I  F  K  S  R  K  R  Q  V  G  R  D  K  T  K  N  K  N  F  V  F  S  V  L  I  F  C  L  Q  I  L  Q  *  Q  V  L  F  S  L  I  I  T  I  F  L  F  L  A  S  Y  I  V  *  D  G  K  L  I  N  V  L  L  V  D  V  R  P  I  L  R  L  L  T  G  E  T  V  Y  M  F  F  F  C  C  C  S  *  Y  Y  I  D  I  L  L  N   : Q  L  E  L  :  V  Q  K  L  V  L  L  H  Y  A  K  K  K  K  K  </second_frame>
            <third_frame>   I  S  L  L  N  G  P  P  *  F  L  S  K  R  V  *  *  R  E  E  *  Q  S  F  L  *  I  S  A  F  S  F  C  C  T  Q :   D  F  S  V  C  I  S  L  K  Y  G  C  R  G  G  S  *  V  S  S  C  S  S  *  S  W  N  *  T  D  Q  S  S  E  R  K  W  K  A  E  S  C  F  R  D  Y  G  A  N  K  I  R  L  S  W  D  *  R  T  *  G  G  N  K  *  N  S  C  E  Q  C  S  K  G  C  G  *  G  L  A  *  T  *  A  G  P  F  V  L  Y  C  *  I  S  E  I  *  R  P  *  T  E  S  Q  N  *  T  G  *  K  R  A  T  E  K  E  P  S  *  I  S  D  H  *  K  I  E  G  Q  K   : G  *  K  I  N  F  H  *  T  K  E  S  P  Q  C  *  E  *  G  I  S  E  C  Y  *  W  *  D  K  G  N  G  T  S  A  *  G  F  G  P  A  P  R  F  *  E  C  R  P  R  E  G  S  Y  S  V  F  I  *  G  G  A  Q  S  S   : Y  Q  G  S  A  I  P  H  S  A  *  K  H  S  S  E  R  R  E  A  N  S  S  G  N  Q  T  T  *  R  N  K  G  R  C  *  K  G  C  C  C  K  S  T  D  S  *  D  D  G  *  K  R  I  N  P  E  S  G  Q   : T  Y  E  C  W  L  G  W  S  S  *  G  T  T  G  S  Q  G  Q  A  *  D  N  R  *  S  D  *  C  H  K  Q  T  D  R  Y  I  G  *  G  I  E  G  R  C  G  E  E  G  Q  D  L  *  T  Y  S  G  I  E  K  T  A  *  R  R   : E  F  F  F  L  S  K  L  Q  R  V  A  Q  S  E  T  T  C  *  P  K  G  C  W  S  P  *  R  A  F  S  Y  R   : G  R  Q  V  H  F  S  L  V  W  *  *  V  F  *  R  *  L  *  E  E  T  L  A  V  A  *  Y  *  A  A  E  Q  G  R  Q  D  E  E  S  *  *  K  A  T  G  V  T  R  S  T  Y  C  L  P  C  *  S  S  S  K  S  *  C  K  T  R  *  G  R  S  C  T  R  *  C  C  S  D  S  E  R  T  A  R  G  *  R  Q  A  A  E  *  C  S  W  *  K  L  K  K  H  R  E  K  S  C  C  *  *  *  *  G  N  L  W  F  G  P  T  Q  G  F  *  A  Q  E  N  R  N  *  *  G  N  T  E  G  D  E  E  R  G  G  D  G  K  K  *  T  G  Y  G  E  E  A  *  V  G  R  E  S  S  C  K  S  C  K  E  S  S  A  R  S  *  K  E  A  Q   : G  T  *  E  E  S  K  E  E  E  R  S  F  C  C  W  S  G  T  N  R  G  T  N  *  N  T  R  G  N  C  *  G  R  K  C  R  G  D  C  *  N  S  R  C  T  Q  G  Q  G  T  E  R  E  H  H  Q  A  Q  S  N  T  C  K  R  L  R  A  S  Q  S  Y  T  K  A  Q  E  S  N  K  L  L  A  M  G  S  C  S  C  C  T  R  D  S  G  T  S  S  H  R  I  H  V  S  S  K  V  E  R  G  R  W  G  E  T  K  Q  K  T  K  T  L  F  L  V  F  *  F  F  V  Y  K  Y  C  N  S  K  Y  C  L  V  *  S  *  Q  Y  F  F  F  L  H  P  I  *  F  R  M  E  N  S  *  M  F  C  W  *  M  C  G  L  S  *  D  Y  L  L  E  R  Q  S  T  C  F  S  F  V  A  V  V  D  I  I  L  T  F  C  L  I  :  S  S  N  L :   Y  K  N  *  S  S  S  T  M  Q  K  K  K  K  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0046G04.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="7" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28352" stop="28717"/>
                    <exon start="29053" stop="29247"/>
                    <exon start="29370" stop="29549"/>
                    <exon start="29676" stop="29870"/>
                    <exon start="30694" stop="30792"/>
                    <exon start="30868" stop="31401"/>
                    <exon start="31575" stop="31895"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1887</number_coding_nucleotides>
                  <number_encoded_amino_acids>629</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NMGVEVEAKLVHVPVEAGTEQINLLKENGKPNHVSGITEPIKFGSHGTEEPKEEISRIPVSNVPKDAVEDWPEPKQVHSFYTVKFRRFDDPKLKARIELAEKELQKKNQARSQIIEKLKAKRAEKSIFIEQRKALSAENKEFRSAIDGKIKEMAPLHEALGQLRGSRNAGRERGPTVCSSEEELNHLIKGLQYRIQHESIPLNEEKQILREIKQLEGTREDVKKVAAARAQIHETMGEKESIQSQVKLMNVGLDGVRKGQQEVKGRLKIIDDQIDAINKQIGILDEELKDVVEKRDKTYEHILELRKQREEGNSSFYQNSNVLHKVKQLADQKDVGALKELSVTEVDKFISLWCGSKSFRDDYERRLLQSLDIRQLSRDGRMRNPDEKPLVLPEAPTVSRAEVPARANAKPVKEDHAPVDAAPIQKEQQEVSGKQLNDARGKNSKSTEKKAVVDDDEEIYGLDLHKDSKPKKIEIDEATLKEMKKEEEMAKNKQAMERKRKLAEKAAAKAAKKAQLEAEKKLKEREKKAKKKSGASAAGQEPIEEPTETPEEIAEEENAEETVETAVAPKVKARKENTIRHRATRARGSELPKAILKRKKATNYWLWAAAPAALAILVLLVIGYMYLQK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="32273" PGL_stop="31580"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="32273" e_stop="32267"/>
            <exon e_start="32013" e_stop="31580"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.193" acc_prob="0.000" e_score="0.714"/>
          <exon-only e_score="0.935"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.714">
            <gDNA_exon_boundary e_start="32273" e_stop="32267" e_length="7"/>
          </exon>
          <intron i_serial="1" don_prob="0.193" acc_prob="0.000">
            <gDNA_intron_boundary i_start="32266" i_stop="32014" i_length="253"/>
          </intron>
          <exon e_serial="2" e_score="0.935">
            <gDNA_exon_boundary e_start="32013" e_stop="31580" e_length="434"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32273" stop="32267"/>
              <exon start="32013" stop="31738"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237287" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31901" stop="31580"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E580796" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTTTCG : AAATATTGTTATGATCAAACTAAACAGTACTTGCTATTGCAGTATTTGTAAACAAAAAATTAAAACACTAAAAACAAAGTTTTTGTTTTTTGTTTTGTCTCTCCCCACCTGCCTCTTTCTACTTTTGAAGATACATGTATCCGATGACTAGAAGTACCAGAATCGCGAGTGCAGCAGGAGCAGCTGCCCATAGCCAGTAGTTTGTTGCTTTCTTGCGCTTTAGTATAGCTTTGGGAAGCTCGGAGCCTCTTGCACGTGTTGCTCTGTGCCTGATGGTGTTCTCTTTCCGTGCCTTGACCTTGGGTGCAACGGCTGTTTCAACAGTCTCCTCTGCATTTTCTTCCTCAGCAATTTCCTCGGGTGTTTCAGTTGGTTCCTCGATTGGTTCCTGACCAGCAGCAGAAGCTCCGCTCTTCTTCTTTGCTTTCTTCTCA</gDNA_template>
            <first_frame> F  F   : E  I  L  L  *  S  N  *  T  V  L  A  I  A  V  F  V  N  K  K  L  K  H  *  K  Q  S  F  C  F  L  F  C  L  S  P  P  A  S  F  Y  F  *  R  Y  M  Y  P  M  T  R  S  T  R  I  A  S  A  A  G  A  A  A  H  S  Q  *  F  V  A  F  L  R  F  S  I  A  L  G  S  S  E  P  L  A  R  V  A  L  C  L  M  V  F  S  F  R  A  L  T  L  G  A  T  A  V  S  T  V  S  S  A  F  S  S  S  A  I  S  S  G  V  S  V  G  S  S  I  G  S  *  P  A  A  E  A  P  L  F  F  F  A  F  F  S </first_frame>
            <second_frame>  F  S  :  K  Y  C  Y  D  Q  T  K  Q  Y  L  L  L  Q  Y  L  *  T  K  N  *  N  T  K  N  K  V  F  V  F  C  F  V  S  P  H  L  P  L  S  T  F  E  D  T  C  I  R  *  L  E  V  P  E  S  R  V  Q  Q  E  Q  L  P  I  A  S  S  L  L  L  S  C  A  L  V  *  L  W  E  A  R  S  L  L  H  V  L  L  C  A  *  W  C  S  L  S  V  P  *  P  W  V  Q  R  L  F  Q  Q  S  P  L  H  F  L  P  Q  Q  F  P  R  V  F  Q  L  V  P  R  L  V  P  D  Q  Q  Q  K  L  R  S  S  S  L  L  S  S   </second_frame>
            <third_frame>   F  R :   N  I  V  M  I  K  L  N  S  T  C  Y  C  S  I  C  K  Q  K  I  K  T  L  K  T  K  F  L  F  F  V  L  S  L  P  T  C  L  F  L  L  L  K  I  H  V  S  D  D  *  K  Y  Q  N  R  E  C  S  R  S  S  C  P  *  P  V  V  C  C  F  L  A  L  *  Y  S  F  G  K  L  G  A  S  C  T  C  C  S  V  P  D  G  V  L  F  P  C  L  D  L  G  C  N  G  C  F  N  S  L  L  C  I  F  F  L  S  N  F  L  G  C  F  S  W  F  L  D  W  F  L  T  S  S  R  S  S  A  L  L  L  C  F  L  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0046G04.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="31790" stop="31581"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YSFGKLGASCTCCSVPDGVLFPCLDLGCNGCFNSLLCIFFLSNFLGCFSWFLDWFLTSSRSSALLLCFLL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="34682" PGL_stop="34318"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="34682" e_stop="34318"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.923"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.923">
            <gDNA_exon_boundary e_start="34682" e_stop="34318" e_length="365"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34682" stop="34318"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E219927" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34650" stop="34318"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E219783" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGTGGGGTATGTACTAGAGTGATTGATGATCCTAAGAATTGTGGCAAATGTAATAGAGTTTGTAAGGATGGGGTGAAATGTGAAAATGGATATTGTGGGTATGCTTAGTTATAAGGTGAAATTATAACGGGTTGAGCTGATACGATTATAATACATTCAGTGTAATTTCACGAGTGGGATCTGAAATTAGTTGAGTGACTCCATATCGTAAGTACTATATATCAAGTTTTTTTTTTTTTTTTTTTTGCATAGTGGAGGAGGACTAATTTTTGTACCTAAGATTCAACAAGCTCCATTTGATACAAAGAAGAAATACTTGTGACTATGTTGTCATTAATAAAAATGTATGTGATGTTGTTCCTGGT</gDNA_template>
            <first_frame> G  G  V  C  T  R  V  I  D  D  P  K  N  C  G  K  C  N  R  V  C  K  D  G  V  K  C  E  N  G  Y  C  G  Y  A  *  L  *  G  E  I  I  T  G  *  A  D  T  I  I  I  H  S  V  *  F  H  E  W  D  L  K  L  V  E  *  L  H  I  V  S  T  I  Y  Q  V  F  F  F  F  F  F  A  *  W  R  R  T  N  F  C  T  *  D  S  T  S  S  I  *  Y  K  E  E  I  L  V  T  M  L  S  L  I  K  M  Y  V  M  L  F  L   </first_frame>
            <second_frame>  V  G  Y  V  L  E  *  L  M  I  L  R  I  V  A  N  V  I  E  F  V  R  M  G  *  N  V  K  M  D  I  V  G  M  L  S  Y  K  V  K  L  *  R  V  E  L  I  R  L  *  Y  I  Q  C  N  F  T  S  G  I  *  N  *  L  S  D  S  I  S  *  V  L  Y  I  K  F  F  F  F  F  F  L  H  S  G  G  G  L  I  F  V  P  K  I  Q  Q  A  P  F  D  T  K  K  K  Y  L  *  L  C  C  H  *  *  K  C  M  *  C  C  S  W  </second_frame>
            <third_frame>   W  G  M  Y  *  S  D  *  *  S  *  E  L  W  Q  M  *  *  S  L  *  G  W  G  E  M  *  K  W  I  L  W  V  C  L  V  I  R  *  N  Y  N  G  L  S  *  Y  D  Y  N  T  F  S  V  I  S  R  V  G  S  E  I  S  *  V  T  P  Y  R  K  Y  Y  I  S  S  F  F  F  F  F  F  C  I  V  E  E  D  *  F  L  Y  L  R  F  N  K  L  H  L  I  Q  R  R  N  T  C  D  Y  V  V  I  N  K  N  V  C  D  V  V  P  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0046G04.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="40455" PGL_stop="41485"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="40455" e_stop="40823"/>
            <exon e_start="41312" e_stop="41485"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.995" e_score="0.957"/>
          <exon-only e_score="0.977"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.957">
            <gDNA_exon_boundary e_start="40455" e_stop="40823" e_length="369"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.995">
            <gDNA_intron_boundary i_start="40824" i_stop="41311" i_length="488"/>
          </intron>
          <exon e_serial="2" e_score="0.977">
            <gDNA_exon_boundary e_start="41312" e_stop="41485" e_length="174"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40455" stop="40823"/>
              <exon start="41312" stop="41485"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E484374" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCTCCATCAACAATGGCTTCCACCAATAGCTTCCTCAATACACCAACCAAAACTCCAACTAGTACTTCCATTTCCAAAAAGCACCACCACAAGCATCATACGGCGGATTCAAACAGATCGGCTTCTGAATTCAAGGACCGATTTGAGGCTTACAATCGTCTTCAAGCAGCCGCTGTAGCTTTCGGTGAGAAACTTCCGATTCCTGAAATAGTTGCTATTGGTGGACAGTCCGATGGGAAAAGCTCCCTCCTTGAAGCCCTATTGGGATTCCGGTTCAATGTCCGAGAAGTTGAAATGGGTACCCGACGCCCTCTCATCTTGCAAATGGTCCATGACCAATCCGCTTTAGATCCTCGTTGCCGCTTTCAG : GATGAGGATTCAGAAGAATATGGAAGTCCACTTGTCTTGGCCTCTGAGATTGCAGATACCATAAAGTCTCGGACTGAGTCACTTTTGAAAAGGACTAGAGCGGCAGTCTCTTCAAAGCCTATTGTCATGAGAGCAGAATATGCTCATTGCCCAAATCTTACCATCATTGATACA</gDNA_template>
            <first_frame> A  P  S  T  M  A  S  T  N  S  F  L  N  T  P  T  K  T  P  T  S  T  S  I  S  K  K  H  H  H  K  H  H  T  A  D  S  N  R  S  A  S  E  F  K  D  R  F  E  A  Y  N  R  L  Q  A  A  A  V  A  F  G  E  K  L  P  I  P  E  I  V  A  I  G  G  Q  S  D  G  K  S  S  L  L  E  A  L  L  G  F  R  F  N  V  R  E  V  E  M  G  T  R  R  P  L  I  L  Q  M  V  H  D  Q  S  A  L  D  P  R  C  R  F  Q  :  D  E  D  S  E  E  Y  G  S  P  L  V  L  A  S  E  I  A  D  T  I  K  S  R  T  E  S  L  L  K  R  T  R  A  A  V  S  S  K  P  I  V  M  R  A  E  Y  A  H  C  P  N  L  T  I  I  D  T </first_frame>
            <second_frame>  L  H  Q  Q  W  L  P  P  I  A  S  S  I  H  Q  P  K  L  Q  L  V  L  P  F  P  K  S  T  T  T  S  I  I  R  R  I  Q  T  D  R  L  L  N  S  R  T  D  L  R  L  T  I  V  F  K  Q  P  L  *  L  S  V  R  N  F  R  F  L  K  *  L  L  L  V  D  S  P  M  G  K  A  P  S  L  K  P  Y  W  D  S  G  S  M  S  E  K  L  K  W  V  P  D  A  L  S  S  C  K  W  S  M  T  N  P  L  *  I  L  V  A  A  F  R :   M  R  I  Q  K  N  M  E  V  H  L  S  W  P  L  R  L  Q  I  P  *  S  L  G  L  S  H  F  *  K  G  L  E  R  Q  S  L  Q  S  L  L  S  *  E  Q  N  M  L  I  A  Q  I  L  P  S  L  I   </second_frame>
            <third_frame>   S  I  N  N  G  F  H  Q  *  L  P  Q  Y  T  N  Q  N  S  N  *  Y  F  H  F  Q  K  A  P  P  Q  A  S  Y  G  G  F  K  Q  I  G  F  *  I  Q  G  P  I  *  G  L  Q  S  S  S  S  S  R  C  S  F  R  *  E  T  S  D  S  *  N  S  C  Y  W  W  T  V  R  W  E  K  L  P  P  *  S  P  I  G  I  P  V  Q  C  P  R  S  *  N  G  Y  P  T  P  S  H  L  A  N  G  P  *  P  I  R  F  R  S  S  L  P  L  S   : G  *  G  F  R  R  I  W  K  S  T  C  L  G  L  *  D  C  R  Y  H  K  V  S  D  *  V  T  F  E  K  D  *  S  G  S  L  F  K  A  Y  C  H  E  S  R  I  C  S  L  P  K  S  Y  H  H  *  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0046G04.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="40455" stop="40823"/>
                    <exon start="41312" stop="41485"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>543</number_coding_nucleotides>
                  <number_encoded_amino_acids>181</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>APSTMASTNSFLNTPTKTPTSTSISKKHHHKHHTADSNRSASEFKDRFEAYNRLQAAAVAFGEKLPIPEIVAIGGQSDGKSSLLEALLGFRFNVREVEMGTRRPLILQMVHDQSALDPRCRFQDEDSEEYGSPLVLASEIADTIKSRTESLLKRTRAAVSSKPIVMRAEYAHCPNLTIIDT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="52360" PGL_stop="53363"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="52360" e_stop="53363"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.935"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.935">
            <gDNA_exon_boundary e_start="52360" e_stop="53363" e_length="1004"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52360" stop="52820"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E399977" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52457" stop="53082"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E608906" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52458" stop="53232"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E619453" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52679" stop="53223"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688764" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52679" stop="53223"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550996" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52679" stop="53222"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551045" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52679" stop="53222"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688826" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52679" stop="52895"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551020" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52680" stop="53363"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262827" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52680" stop="53220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258408" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52686" stop="53207"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551008" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52686" stop="53207"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688780" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52713" stop="53095"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551345" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52717" stop="53127"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52717" stop="53127"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688777" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAATTACTTGTAATCTTTCTTCACCTTCCCCATTAGCCTTGTTTTTCACTCCAAAACAAACTTTGCTTTTTTTTTTTTTATTCTTCTTTCTTCTTCATCTTGTTGTTGATTTGAGATAGTAACAATGGAAATCAATTCAAGAATTCAAGATAGAGAGAACCCATCTTCCATAAACTCACCAAGAAGCAATGGAACAAGTCCTACAAGCAACAGCAATGGATCAGTTATCCAAAATCCAACCCCACCACTGACCCCAAAAACAATTTCTAGATCTGAAACAACTAACCCATACCCAACAACTTTTGTTCAAGCTGATACATCTTCTTTCAAACAAGTGGTTCAAATGCTAACTGGATCATCTGAAACTTCTGCGAAACAATCATCTGCTTCAGATCCATCTTCTTCTTCAAATTCAAATTCAAATTCAGCAAAAAGTTCAATTCCCCCAATTCGAACAGCACCGAAGAAACCTGGGTTCAAGCTTTACGAGAGGAGAAACAGTTTGAAAAATGGGTTTATGATTAGCCCTTTGATTCCTGGAATTCATCCTCAGAATTCGAGTTTTTCTCCTCGGAACAAACCGGAGATTCTCTCACCCAGTATTCTAGATTTTCCTTCACTTGCTTTAAGCCCTGTTACGCCATTGAATGAAGACCCATTTAATAAATCATCACCATTAACGAATCTATCTGAAGAAGATAAAGCTATTGCTGAGAAGAAGTTTTATTTGCATCCTTCACCAAGAAGAACACCGAGAGACTCTGAACCACAGCTTTTGCCTCTGTTTCCGGTGAGTTCTCCTAGAGTTTCAGGGTCTTCTTCTTGAAAGTGAAAATTTTCAGTGATTTGGTGCTGCTGCTGTGAGAAGGAGAAGAATTTCACCAACAAAAAAGGTAGAGATCTTAGTTTCAATTGTATAATTTGATCTCCTTTTTTCATCCATTGTTTCAGAAACAGATTAAAACGAAGAAAACTGAAATAAACAACTTTTGTTCCATACTTTT</gDNA_template>
            <first_frame> K  L  L  V  I  F  L  H  L  P  H  *  P  C  F  S  L  Q  N  K  L  C  F  F  F  F  Y  S  S  F  F  F  I  L  L  L  I  *  D  S  N  N  G  N  Q  F  K  N  S  R  *  R  E  P  I  F  H  K  L  T  K  K  Q  W  N  K  S  Y  K  Q  Q  Q  W  I  S  Y  P  K  S  N  P  T  T  D  P  K  N  N  F  *  I  *  N  N  *  P  I  P  N  N  F  C  S  S  *  Y  I  F  F  Q  T  S  G  S  N  A  N  W  I  I  *  N  F  C  E  T  I  I  C  F  R  S  I  F  F  F  K  F  K  F  K  F  S  K  K  F  N  S  P  N  S  N  S  T  E  E  T  W  V  Q  A  L  R  E  E  K  Q  F  E  K  W  V  Y  D  *  P  F  D  S  W  N  S  S  S  E  F  E  F  F  S  S  E  Q  T  G  D  S  L  T  Q  Y  S  R  F  S  F  T  C  F  K  P  C  Y  A  I  E  *  R  P  I  *  *  I  I  T  I  N  E  S  I  *  R  R  *  S  Y  C  *  E  E  V  L  F  A  S  F  T  K  K  N  T  E  R  L  *  T  T  A  F  A  S  V  S  G  E  F  S  *  S  F  R  V  F  F  L  K  V  K  I  F  S  D  L  V  L  L  L  *  E  G  E  E  F  H  Q  Q  K  R  *  R  S  *  F  Q  L  Y  N  L  I  S  F  F  H  P  L  F  Q  K  Q  I  K  T  K  K  T  E  I  N  N  F  C  S  I  L   </first_frame>
            <second_frame>  N  Y  L  *  S  F  F  T  F  P  I  S  L  V  F  H  S  K  T  N  F  A  F  F  F  F  I  L  L  S  S  S  S  C  C  *  F  E  I  V  T  M  E  I  N  S  R  I  Q  D  R  E  N  P  S  S  I  N  S  P  R  S  N  G  T  S  P  T  S  N  S  N  G  S  V  I  Q  N  P  T  P  P  L  T  P  K  T  I  S  R  S  E  T  T  N  P  Y  P  T  T  F  V  Q  A  D  T  S  S  F  K  Q  V  V  Q  M  L  T  G  S  S  E  T  S  A  K  Q  S  S  A  S  D  P  S  S  S  S  N  S  N  S  N  S  A  K  S  S  I  P  P  I  R  T  A  P  K  K  P  G  F  K  L  Y  E  R  R  N  S  L  K  N  G  F  M  I  S  P  L  I  P  G  I  H  P  Q  N  S  S  F  S  P  R  N  K  P  E  I  L  S  P  S  I  L  D  F  P  S  L  A  L  S  P  V  T  P  L  N  E  D  P  F  N  K  S  S  P  L  T  N  L  S  E  E  D  K  A  I  A  E  K  K  F  Y  L  H  P  S  P  R  R  T  P  R  D  S  E  P  Q  L  L  P  L  F  P  V  S  S  P  R  V  S  G  S  S  S  *  K  *  K  F  S  V  I  W  C  C  C  C  E  K  E  K  N  F  T  N  K  K  G  R  D  L  S  F  N  C  I  I  *  S  P  F  F  I  H  C  F  R  N  R  L  K  R  R  K  L  K  *  T  T  F  V  P  Y  F  </second_frame>
            <third_frame>   I  T  C  N  L  S  S  P  S  P  L  A  L  F  F  T  P  K  Q  T  L  L  F  F  F  L  F  F  F  L  L  H  L  V  V  D  L  R  *  *  Q  W  K  S  I  Q  E  F  K  I  E  R  T  H  L  P  *  T  H  Q  E  A  M  E  Q  V  L  Q  A  T  A  M  D  Q  L  S  K  I  Q  P  H  H  *  P  Q  K  Q  F  L  D  L  K  Q  L  T  H  T  Q  Q  L  L  F  K  L  I  H  L  L  S  N  K  W  F  K  C  *  L  D  H  L  K  L  L  R  N  N  H  L  L  Q  I  H  L  L  L  Q  I  Q  I  Q  I  Q  Q  K  V  Q  F  P  Q  F  E  Q  H  R  R  N  L  G  S  S  F  T  R  G  E  T  V  *  K  M  G  L  *  L  A  L  *  F  L  E  F  I  L  R  I  R  V  F  L  L  G  T  N  R  R  F  S  H  P  V  F  *  I  F  L  H  L  L  *  A  L  L  R  H  *  M  K  T  H  L  I  N  H  H  H  *  R  I  Y  L  K  K  I  K  L  L  L  R  R  S  F  I  C  I  L  H  Q  E  E  H  R  E  T  L  N  H  S  F  C  L  C  F  R  *  V  L  L  E  F  Q  G  L  L  L  E  S  E  N  F  Q  *  F  G  A  A  A  V  R  R  R  R  I  S  P  T  K  K  V  E  I  L  V  S  I  V  *  F  D  L  L  F  S  S  I  V  S  E  T  D  *  N  E  E  N  *  N  K  Q  L  L  F  H  T  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0046G04.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52469" stop="53185"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>714</number_coding_nucleotides>
                  <number_encoded_amino_acids>238</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FEIVTMEINSRIQDRENPSSINSPRSNGTSPTSNSNGSVIQNPTPPLTPKTISRSETTNPYPTTFVQADTSSFKQVVQMLTGSSETSAKQSSASDPSSSSNSNSNSAKSSIPPIRTAPKKPGFKLYERRNSLKNGFMISPLIPGIHPQNSSFSPRNKPEILSPSILDFPSLALSPVTPLNEDPFNKSSPLTNLSEEDKAIAEKKFYLHPSPRRTPRDSEPQLLPLFPVSSPRVSGSSS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="63346" PGL_stop="62033"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="63346" e_stop="62251"/>
            <exon e_start="62055" e_stop="62033"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="0.435"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="63346" e_stop="62251" e_length="1096"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="62250" i_stop="62056" i_length="195"/>
          </intron>
          <exon e_serial="2" e_score="0.435">
            <gDNA_exon_boundary e_start="62055" e_stop="62033" e_length="23"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63346" stop="62611"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E723425" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63333" stop="62512"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E731956" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63330" stop="62883"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268334" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63315" stop="62699"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E592473" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63294" stop="62857"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E566986" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63291" stop="62513"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E604275" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63288" stop="62609"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E485621" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63286" stop="62628"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E449095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63286" stop="62639"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567150" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63286" stop="62846"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E481871" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63286" stop="62903"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E409456" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63282" stop="62699"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E579426" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63280" stop="62518"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698008" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63280" stop="62609"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E484959" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63278" stop="62418"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704117" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63270" stop="62622"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E468525" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63270" stop="62736"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E557554" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63270" stop="62764"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E582171" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63260" stop="62783"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E486917" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63260" stop="62827"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E483925" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63260" stop="62975"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E484679" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63259" stop="62625"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E558987" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63242" stop="62927"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E710762" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63191" stop="62768"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E447158" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63122" stop="62324"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E623465" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62885" stop="62251"/>
              <exon start="62055" stop="62033"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369581" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62801" stop="62251"/>
              <exon start="62055" stop="62033"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249014" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTTATCAATGAGAATGGATAAGAGCCTTATTTCTTCTCTCCCCCAACCTGTCCCCCCCTCTGTATCTCTCTTTTACGTAATTTAGGGTTTGATCAGCACCATGGATGTTGAGGCAGGCGAGTTCCAAGAGTGGGAGATGATTCCCTCGAACCGGGCATCTGACTCGGAACCGTTAACTCCGGATGGTTCAGCCGGAAACTCGAACGGTGTCGATGAAGTTGGATCTGAGACGATCGGTGTGATTCAACCCAATTACTTTTCTCTAGACTCTCAAATCAGGTATATGAGTACGTTTTCTAAGGATGGAAGCGAGGAGGACTCTGAAAAATCGGATAATCCGAGTTGGATTGAGCCCGATTCTGATAACAACGAGTTTACCATGAAGAATTCTCGCGAATTATGGTCGGATTCCGGCAGTGAGGGTAAAAATGAATTGGCTTTTGAAGAGATGAAAAGTGAAAATGGTGAAGAATTTAGGCCGGTCTCTGTGGAATTTGGTGCTGGAGAAAATAGTCAGCTCCAACAAGTTTCTGTTGAAGAAAATCAGGAAAAGGAAAATGGAAATGTTGAAGGTGAAGGTGAACAGAGGAGGGATGCAGGGAACCAAAAGAAGAGCCTAGTGTGGTGGTGGAAGGTTCCAATACATCTTGTCAAGTATTGTGCTGCTTTTAGAGTTAGCCCTGTGTGGACATTTTCTGCTGCTGCTGCTGCTATTATGGCTTTCGTTATTTTGGTTCGTAGGTTATCTAAGATGAAGAAAAACACCAAGGCATTGAAGCTCAAACTAACTGTGGATGACAAGAATGTATCTCAGTTCACAAACCGTGCTGCACGCCTTAACGAAGCATTCTCTATTGTGAAGCGGGTTCCTCTCATTCGGCCACAGTTGCCAGCCGCTGGAGACACAGTGTGGCCTCTGATGACTTTGAGATAGGCTGTAATATTTCCCCATTTGATATGTTGTGTCGCTTCAGCGATTGTATAATCTACTATGTTTACTGCTGTTGTTTGATCTCAAACCTATGTATATTCACTGGCCAAAGAAATTGCTGGCTTATGCTTCTTTATATAGAAAGCTGCTTTTTGATCTCAAAG : GTGGGAACCATAAAGTCTTAGGA</gDNA_template>
            <first_frame> V  Y  Q  *  E  W  I  R  A  L  F  L  L  S  P  N  L  S  P  P  L  Y  L  S  F  T  *  F  R  V  *  S  A  P  W  M  L  R  Q  A  S  S  K  S  G  R  *  F  P  R  T  G  H  L  T  R  N  R  *  L  R  M  V  Q  P  E  T  R  T  V  S  M  K  L  D  L  R  R  S  V  *  F  N  P  I  T  F  L  *  T  L  K  S  G  I  *  V  R  F  L  R  M  E  A  R  R  T  L  K  N  R  I  I  R  V  G  L  S  P  I  L  I  T  T  S  L  P  *  R  I  L  A  N  Y  G  R  I  P  A  V  R  V  K  M  N  W  L  L  K  R  *  K  V  K  M  V  K  N  L  G  R  S  L  W  N  L  V  L  E  K  I  V  S  S  N  K  F  L  L  K  K  I  R  K  R  K  M  E  M  L  K  V  K  V  N  R  G  G  M  Q  G  T  K  R  R  A  *  C  G  G  G  R  F  Q  Y  I  L  S  S  I  V  L  L  L  E  L  A  L  C  G  H  F  L  L  L  L  L  L  L  W  L  S  L  F  W  F  V  G  Y  L  R  *  R  K  T  P  R  H  *  S  S  N  *  L  W  M  T  R  M  Y  L  S  S  Q  T  V  L  H  A  L  T  K  H  S  L  L  *  S  G  F  L  S  F  G  H  S  C  Q  P  L  E  T  Q  C  G  L  *  *  L  *  D  R  L  *  Y  F  P  I  *  Y  V  V  S  L  Q  R  L  Y  N  L  L  C  L  L  L  L  F  D  L  K  P  M  Y  I  H  W  P  K  K  L  L  A  Y  A  S  L  Y  R  K  L  L  F  D  L  K   : G  G  N  H  K  V  L  G </first_frame>
            <second_frame>  F  I  N  E  N  G  *  E  P  Y  F  F  S  P  P  T  C  P  P  L  C  I  S  L  L  R  N  L  G  F  D  Q  H  H  G  C  *  G  R  R  V  P  R  V  G  D  D  S  L  E  P  G  I  *  L  G  T  V  N  S  G  W  F  S  R  K  L  E  R  C  R  *  S  W  I  *  D  D  R  C  D  S  T  Q  L  L  F  S  R  L  S  N  Q  V  Y  E  Y  V  F  *  G  W  K  R  G  G  L  *  K  I  G  *  S  E  L  D  *  A  R  F  *  *  Q  R  V  Y  H  E  E  F  S  R  I  M  V  G  F  R  Q  *  G  *  K  *  I  G  F  *  R  D  E  K  *  K  W  *  R  I  *  A  G  L  C  G  I  W  C  W  R  K  *  S  A  P  T  S  F  C  *  R  K  S  G  K  G  K  W  K  C  *  R  *  R  *  T  E  E  G  C  R  E  P  K  E  E  P  S  V  V  V  E  G  S  N  T  S  C  Q  V  L  C  C  F  *  S  *  P  C  V  D  I  F  C  C  C  C  C  Y  Y  G  F  R  Y  F  G  S  *  V  I  *  D  E  E  K  H  Q  G  I  E  A  Q  T  N  C  G  *  Q  E  C  I  S  V  H  K  P  C  C  T  P  *  R  S  I  L  Y  C  E  A  G  S  S  H  S  A  T  V  A  S  R  W  R  H  S  V  A  S  D  D  F  E  I  G  C  N  I  S  P  F  D  M  L  C  R  F  S  D  C  I  I  Y  Y  V  Y  C  C  C  L  I  S  N  L  C  I  F  T  G  Q  R  N  C  W  L  M  L  L  Y  I  E  S  C  F  L  I  S  K  :  V  G  T  I  K  S  *   </second_frame>
            <third_frame>   L  S  M  R  M  D  K  S  L  I  S  S  L  P  Q  P  V  P  P  S  V  S  L  F  Y  V  I  *  G  L  I  S  T  M  D  V  E  A  G  E  F  Q  E  W  E  M  I  P  S  N  R  A  S  D  S  E  P  L  T  P  D  G  S  A  G  N  S  N  G  V  D  E  V  G  S  E  T  I  G  V  I  Q  P  N  Y  F  S  L  D  S  Q  I  R  Y  M  S  T  F  S  K  D  G  S  E  E  D  S  E  K  S  D  N  P  S  W  I  E  P  D  S  D  N  N  E  F  T  M  K  N  S  R  E  L  W  S  D  S  G  S  E  G  K  N  E  L  A  F  E  E  M  K  S  E  N  G  E  E  F  R  P  V  S  V  E  F  G  A  G  E  N  S  Q  L  Q  Q  V  S  V  E  E  N  Q  E  K  E  N  G  N  V  E  G  E  G  E  Q  R  R  D  A  G  N  Q  K  K  S  L  V  W  W  W  K  V  P  I  H  L  V  K  Y  C  A  A  F  R  V  S  P  V  W  T  F  S  A  A  A  A  A  I  M  A  F  V  I  L  V  R  R  L  S  K  M  K  K  N  T  K  A  L  K  L  K  L  T  V  D  D  K  N  V  S  Q  F  T  N  R  A  A  R  L  N  E  A  F  S  I  V  K  R  V  P  L  I  R  P  Q  L  P  A  A  G  D  T  V  W  P  L  M  T  L  R  *  A  V  I  F  P  H  L  I  C  C  V  A  S  A  I  V  *  S  T  M  F  T  A  V  V  *  S  Q  T  Y  V  Y  S  L  A  K  E  I  A  G  L  C  F  F  I  *  K  A  A  F  *  S  Q  R :   W  E  P  *  S  L  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0046G04.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="63260" stop="62412"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>846</number_coding_nucleotides>
                  <number_encoded_amino_acids>282</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GLISTMDVEAGEFQEWEMIPSNRASDSEPLTPDGSAGNSNGVDEVGSETIGVIQPNYFSLDSQIRYMSTFSKDGSEEDSEKSDNPSWIEPDSDNNEFTMKNSRELWSDSGSEGKNELAFEEMKSENGEEFRPVSVEFGAGENSQLQQVSVEENQEKENGNVEGEGEQRRDAGNQKKSLVWWWKVPIHLVKYCAAFRVSPVWTFSAAAAAIMAFVILVRRLSKMKKNTKALKLKLTVDDKNVSQFTNRAARLNEAFSIVKRVPLIRPQLPAAGDTVWPLMTLR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="62609" PGL_stop="63363"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="62609" e_stop="63363"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="62609" e_stop="63363" e_length="755"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62609" stop="63363"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369580" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAACCAAAATAACGAAAGCCATAATAGCAGCAGCAGCAGCAGAAAATGTCCACACAGGGCTAACTCTAAAAGCAGCACAATACTTGACAAGATGTATTGGAACCTTCCACCACCACACTAGGCTCTTCTTTTGGTTCCCTGCATCCCTCCTCTGTTCACCTTCACCTTCAACATTTCCATTTTCCTTTTCCTGATTTTCTTCAACAGAAACTTGTTGGAGCTGACTATTTTCTCCAGCACCAAATTCCACAGAGACCGGCCTAAATTCTTCACCATTTTCACTTTTCATCTCTTCAAAAGCCAATTCATTTTTACCCTCACTGCCGGAATCCGACCATAATTCGCGAGAATTCTTCATGGTAAACTCGTTGTTATCAGAATCGGGCTCAATCCAACTCGGATTATCCGATTTTTCAGAGTCCTCCTCGCTTCCATCCTTAGAAAACGTACTCATATACCTGATTTGAGAGTCTAGAGAAAAGTAATTGGGTTGAATCACACCGATCGTCTCAGATCCAACTTCATCGACACCGTTCGAGTTTCCGGCTGAACCATCCGGAGTTAACGGTTCCGAGTCAGATGCCCGGTTCGAGGGAATCATCTCCCACTCTTGGAACTCGCCTGCCTCAACATCCATGGTGCTGATCAAACCCTAAATTACGTAAAAGAGAGATACAGAGGGGGGGACAGGTTGGGGGAGAGAAGAAATAAGGCTCTTATCCATTCTCATTGATAAACCTATTTAATCAAATTCA</gDNA_template>
            <first_frame> E  P  K  *  R  K  P  *  *  Q  Q  Q  Q  Q  K  M  S  T  Q  G  *  L  *  K  Q  H  N  T  *  Q  D  V  L  E  P  S  T  T  T  L  G  S  S  F  G  S  L  H  P  S  S  V  H  L  H  L  Q  H  F  H  F  P  F  P  D  F  L  Q  Q  K  L  V  G  A  D  Y  F  L  Q  H  Q  I  P  Q  R  P  A  *  I  L  H  H  F  H  F  S  S  L  Q  K  P  I  H  F  Y  P  H  C  R  N  P  T  I  I  R  E  N  S  S  W  *  T  R  C  Y  Q  N  R  A  Q  S  N  S  D  Y  P  I  F  Q  S  P  P  R  F  H  P  *  K  T  Y  S  Y  T  *  F  E  S  L  E  K  S  N  W  V  E  S  H  R  S  S  Q  I  Q  L  H  R  H  R  S  S  F  R  L  N  H  P  E  L  T  V  P  S  Q  M  P  G  S  R  E  S  S  P  T  L  G  T  R  L  P  Q  H  P  W  C  *  S  N  P  K  L  R  K  R  E  I  Q  R  G  G  Q  V  G  G  E  K  K  *  G  S  Y  P  F  S  L  I  N  L  F  N  Q  I   </first_frame>
            <second_frame>  N  Q  N  N  E  S  H  N  S  S  S  S  S  R  K  C  P  H  R  A  N  S  K  S  S  T  I  L  D  K  M  Y  W  N  L  P  P  P  H  *  A  L  L  L  V  P  C  I  P  P  L  F  T  F  T  F  N  I  S  I  F  L  F  L  I  F  F  N  R  N  L  L  E  L  T  I  F  S  S  T  K  F  H  R  D  R  P  K  F  F  T  I  F  T  F  H  L  F  K  S  Q  F  I  F  T  L  T  A  G  I  R  P  *  F  A  R  I  L  H  G  K  L  V  V  I  R  I  G  L  N  P  T  R  I  I  R  F  F  R  V  L  L  A  S  I  L  R  K  R  T  H  I  P  D  L  R  V  *  R  K  V  I  G  L  N  H  T  D  R  L  R  S  N  F  I  D  T  V  R  V  S  G  *  T  I  R  S  *  R  F  R  V  R  C  P  V  R  G  N  H  L  P  L  L  E  L  A  C  L  N  I  H  G  A  D  Q  T  L  N  Y  V  K  E  R  Y  R  G  G  D  R  L  G  E  R  R  N  K  A  L  I  H  S  H  *  *  T  Y  L  I  K  F  </second_frame>
            <third_frame>   T  K  I  T  K  A  I  I  A  A  A  A  A  E  N  V  H  T  G  L  T  L  K  A  A  Q  Y  L  T  R  C  I  G  T  F  H  H  H  T  R  L  F  F  W  F  P  A  S  L  L  C  S  P  S  P  S  T  F  P  F  S  F  S  *  F  S  S  T  E  T  C  W  S  *  L  F  S  P  A  P  N  S  T  E  T  G  L  N  S  S  P  F  S  L  F  I  S  S  K  A  N  S  F  L  P  S  L  P  E  S  D  H  N  S  R  E  F  F  M  V  N  S  L  L  S  E  S  G  S  I  Q  L  G  L  S  D  F  S  E  S  S  S  L  P  S  L  E  N  V  L  I  Y  L  I  *  E  S  R  E  K  *  L  G  *  I  T  P  I  V  S  D  P  T  S  S  T  P  F  E  F  P  A  E  P  S  G  V  N  G  S  E  S  D  A  R  F  E  G  I  I  S  H  S  W  N  S  P  A  S  T  S  M  V  L  I  K  P  *  I  T  *  K  R  D  T  E  G  G  T  G  W  G  R  E  E  I  R  L  L  S  I  L  I  D  K  P  I  *  S  N  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0046G04.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="62833" stop="63075"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LFSPAPNSTETGLNSSPFSLFISSKANSFLPSLPESDHNSREFFMVNSLLSESGSIQLGLSDFSESSSLPSLENVLIYLI*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0046G04.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="62730" stop="62948"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ALLLVPCIPPLFTFTFNISIFLFLIFFNRNLLELTIFSSTKFHRDRPKFFTIFTFHLFKSQFIFTLTAGIRP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="69560" PGL_stop="63839"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="69560" e_stop="69354"/>
            <exon e_start="69267" e_stop="69131"/>
            <exon e_start="68445" e_stop="68350"/>
            <exon e_start="67813" e_stop="67694"/>
            <exon e_start="67486" e_stop="67397"/>
            <exon e_start="67146" e_stop="67006"/>
            <exon e_start="66894" e_stop="66739"/>
            <exon e_start="65565" e_stop="65416"/>
            <exon e_start="65300" e_stop="65199"/>
            <exon e_start="64945" e_stop="64836"/>
            <exon e_start="64752" e_stop="64634"/>
            <exon e_start="64232" e_stop="63919"/>
            <exon e_start="63856" e_stop="63839"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.779" acc_prob="1.000" e_score="0.990"/>
          <exon-intron don_prob="0.958" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.935" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.957" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.968" acc_prob="1.000" e_score="0.994"/>
          <exon-intron don_prob="0.431" acc_prob="0.943" e_score="0.987"/>
          <exon-intron don_prob="0.970" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.885" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.915" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.956" e_score="0.997"/>
          <exon-only e_score="0.389"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="69560" e_stop="69354" e_length="207"/>
          </exon>
          <intron i_serial="1" don_prob="0.779" acc_prob="1.000">
            <gDNA_intron_boundary i_start="69353" i_stop="69268" i_length="86"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="69267" e_stop="69131" e_length="137"/>
          </exon>
          <intron i_serial="2" don_prob="0.958" acc_prob="1.000">
            <gDNA_intron_boundary i_start="69130" i_stop="68446" i_length="685"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="68445" e_stop="68350" e_length="96"/>
          </exon>
          <intron i_serial="3" don_prob="0.935" acc_prob="0.996">
            <gDNA_intron_boundary i_start="68349" i_stop="67814" i_length="536"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="67813" e_stop="67694" e_length="120"/>
          </exon>
          <intron i_serial="4" don_prob="0.957" acc_prob="0.994">
            <gDNA_intron_boundary i_start="67693" i_stop="67487" i_length="207"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="67486" e_stop="67397" e_length="90"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="67396" i_stop="67147" i_length="250"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="67146" e_stop="67006" e_length="141"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.992">
            <gDNA_intron_boundary i_start="67005" i_stop="66895" i_length="111"/>
          </intron>
          <exon e_serial="7" e_score="0.994">
            <gDNA_exon_boundary e_start="66894" e_stop="66739" e_length="156"/>
          </exon>
          <intron i_serial="7" don_prob="0.968" acc_prob="1.000">
            <gDNA_intron_boundary i_start="66738" i_stop="65566" i_length="1173"/>
          </intron>
          <exon e_serial="8" e_score="0.987">
            <gDNA_exon_boundary e_start="65565" e_stop="65416" e_length="150"/>
          </exon>
          <intron i_serial="8" don_prob="0.431" acc_prob="0.943">
            <gDNA_intron_boundary i_start="65415" i_stop="65301" i_length="115"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="65300" e_stop="65199" e_length="102"/>
          </exon>
          <intron i_serial="9" don_prob="0.970" acc_prob="0.983">
            <gDNA_intron_boundary i_start="65198" i_stop="64946" i_length="253"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="64945" e_stop="64836" e_length="110"/>
          </exon>
          <intron i_serial="10" don_prob="0.885" acc_prob="0.983">
            <gDNA_intron_boundary i_start="64835" i_stop="64753" i_length="83"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="64752" e_stop="64634" e_length="119"/>
          </exon>
          <intron i_serial="11" don_prob="0.995" acc_prob="0.915">
            <gDNA_intron_boundary i_start="64633" i_stop="64233" i_length="401"/>
          </intron>
          <exon e_serial="12" e_score="0.997">
            <gDNA_exon_boundary e_start="64232" e_stop="63919" e_length="314"/>
          </exon>
          <intron i_serial="12" don_prob="0.900" acc_prob="0.956">
            <gDNA_intron_boundary i_start="63918" i_stop="63857" i_length="62"/>
          </intron>
          <exon e_serial="13" e_score="0.389">
            <gDNA_exon_boundary e_start="63856" e_stop="63839" e_length="18"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69560" stop="69354"/>
              <exon start="69267" stop="69131"/>
              <exon start="68445" stop="68350"/>
              <exon start="67813" stop="67700"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E441052" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69558" stop="69354"/>
              <exon start="69267" stop="69197"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E457108" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69557" stop="69354"/>
              <exon start="69267" stop="69131"/>
              <exon start="68445" stop="68350"/>
              <exon start="67813" stop="67694"/>
              <exon start="67486" stop="67397"/>
              <exon start="67146" stop="67111"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E480240" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69546" stop="69354"/>
              <exon start="69267" stop="69131"/>
              <exon start="68445" stop="68350"/>
              <exon start="67813" stop="67694"/>
              <exon start="67486" stop="67397"/>
              <exon start="67146" stop="67133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413655" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69546" stop="69354"/>
              <exon start="69267" stop="69131"/>
              <exon start="68445" stop="68350"/>
              <exon start="67813" stop="67694"/>
              <exon start="67486" stop="67455"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E486460" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69546" stop="69354"/>
              <exon start="69267" stop="69131"/>
              <exon start="68445" stop="68350"/>
              <exon start="67813" stop="67764"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E472517" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69533" stop="69354"/>
              <exon start="69267" stop="69131"/>
              <exon start="68445" stop="68350"/>
              <exon start="67813" stop="67694"/>
              <exon start="67486" stop="67397"/>
              <exon start="67146" stop="67006"/>
              <exon start="66894" stop="66827"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698044" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69236" stop="69131"/>
              <exon start="68445" stop="68350"/>
              <exon start="67813" stop="67694"/>
              <exon start="67486" stop="67397"/>
              <exon start="67146" stop="67006"/>
              <exon start="66894" stop="66779"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E454742" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68428" stop="68350"/>
              <exon start="67813" stop="67694"/>
              <exon start="67486" stop="67397"/>
              <exon start="67146" stop="67006"/>
              <exon start="66894" stop="66739"/>
              <exon start="65565" stop="65506"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E399895" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68420" stop="68350"/>
              <exon start="67813" stop="67694"/>
              <exon start="67486" stop="67397"/>
              <exon start="67146" stop="67006"/>
              <exon start="66894" stop="66739"/>
              <exon start="65565" stop="65433"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464325" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68398" stop="68350"/>
              <exon start="67813" stop="67694"/>
              <exon start="67486" stop="67397"/>
              <exon start="67146" stop="67006"/>
              <exon start="66894" stop="66739"/>
              <exon start="65565" stop="65500"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E458144" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67788" stop="67694"/>
              <exon start="67486" stop="67397"/>
              <exon start="67146" stop="67006"/>
              <exon start="66894" stop="66740"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208185" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67788" stop="67694"/>
              <exon start="67486" stop="67397"/>
              <exon start="67146" stop="67006"/>
              <exon start="66894" stop="66802"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E376563" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67778" stop="67694"/>
              <exon start="67486" stop="67397"/>
              <exon start="67146" stop="67015"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E288155" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67103" stop="67006"/>
              <exon start="66894" stop="66748"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E305408" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66885" stop="66739"/>
              <exon start="65565" stop="65416"/>
              <exon start="65300" stop="65199"/>
              <exon start="64945" stop="64836"/>
              <exon start="64752" stop="64634"/>
              <exon start="64232" stop="64156"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E455616" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65485" stop="65416"/>
              <exon start="65300" stop="65199"/>
              <exon start="64945" stop="64836"/>
              <exon start="64752" stop="64634"/>
              <exon start="64232" stop="64167"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238220" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64736" stop="64634"/>
              <exon start="64232" stop="63919"/>
              <exon start="63856" stop="63839"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351274" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAGCAAACGGAGCTCTGAAAATGGCGACTACCAGTCAAGCATATTTGGAAGGTGACAAGGTCAAAGAGACCAAGTCCTTAATCGCTGAGCTTTGCCGTCATTTCTACAATCAGGGATGGGTTTCCGGCACCGGCGGCAGCATCACCATTAAAGTACATGATGAATCCGTTCCTAAATCCGAACAACTTATCGTTATGTCTCCTTCTG : GGGTGCAAAAGGAAAGGATGGTGGATGAGGATATGTATATTATGTCATCAGATGGGTCTATTTTATCTGCACCGGTGGCTAAACCTACCCCTCATAAACCTCCTAAGTGTTCTGATTGTGCGCCTCTTTTTATGAAG : GCATATCTGATGCGTAATGCTGGTGCTGTTATCCACAGTCATGGAATGGAATCCTGTCTTGTAACGATGCTCAATCCACTAGCAAAAGAATTTCGG : ATCACTCATATGGAAATGATAAAAGGAATTCAAGGGCATGGTTACTATGATGAACTTGTGGTTCCTATCATAGAGAACACTGCATATGAGAGAGAACTCACAGAATCTCTTGCTGAAGCT : ATCAAAGCTTACCCGAAAACGACAGCTGTGCTGGTTCGCAACCATGGTATATATGTATGGGGAGATTCTTGGATCAGCGCTAAAACACAG : TCTGAGTGCTACCACTACCTCTTTGATGCTGCAATTAAACTACATCAATTAGGAATTGACTGGACAACACCAGCTCATGGTCCCATTCAGAATGCAAAAATATCTGCACTTGCTCCAAATGGCAGCATAAAGCCATCAAGG : CGGTGCATCGTTTTGGATATCGAAGGAACTACTACTCCAATATCATTTGTTACTGAGGTTCTATTCCCTTATGCACGTAATAATGTTGGGAGACATTTGGATGCAACATATGATTCAGCAGAGACTCAACAGGATATTAAGTTATTACGCGCTCAA : GTGCAACAAGACCTGGAAAATGGTGTTGCTGGTGCTGTGTGTATCCCAGCTGATGATGCTGGGAAAATGGAGGTAATTGCAGCTTTGGTCGCTAATGTTGAGGCAATGATTAAAGCTGACCGCAAGATTACTGCCTTGAAAGAGTTACAG : GGGCATATTTGGCAAACTGGGTTCCAAAACAATGAGTTAGAGGGACTTGTTTTTGATGATGTACCTTCAGCTCTTGAGAAATGGACTGCTTTAGGCGTCAAG : GTGTACATATACTCGAGTGGCAGCAGATTGGCACAGAGGCTTTTGTTTGGTCACACAAAACATGGAGACCTGAGAAAATTTCTCTATGGATTTTTTGATACAACAGTGGG : CAACAAGAGAGAAACAAAAAGTTATGCAGAAATTACTGCGTCGTTGGGTGTAGATAATCCATCAGAGATTTTGTTTGTGACAGATGTCTATCAAGAAGCCACAGCTGCAAAGGCAGCAG : GTTTGGAAGTGATAATCTCTATCAGACCAGGAAACGGACCTCTTCCAGATAGTCACGAGTTCAGGACAGTCAAATCATTTTCGGAGATCTAAAGATGGGATGTGTCATGTATTGTGTAACATTAACTTAATAAAAGTAGGTTGGGAGTTGATTCATCGTCGAAAAAGTTGAGCCAAATGAGTCTCATACTGCAGCTCTTATCTTCATGATAGTGTTAGTCTTCTTTTTCTTGTTGTATTGAGATGTAATAGTTTTTTTTATCTTTGTGAGAACTATTGTTGGTGATTGATGTTTTCATTGTTCCATTTTCAAAG : ATCAAATGGAAACTCGCG</gDNA_template>
            <first_frame> Q  Q  T  E  L  *  K  W  R  L  P  V  K  H  I  W  K  V  T  R  S  K  R  P  S  P  *  S  L  S  F  A  V  I  S  T  I  R  D  G  F  P  A  P  A  A  A  S  P  L  K  Y  M  M  N  P  F  L  N  P  N  N  L  S  L  C  L  L  L  :  G  C  K  R  K  G  W  W  M  R  I  C  I  L  C  H  Q  M  G  L  F  Y  L  H  R  W  L  N  L  P  L  I  N  L  L  S  V  L  I  V  R  L  F  L  *  R :   H  I  *  C  V  M  L  V  L  L  S  T  V  M  E  W  N  P  V  L  *  R  C  S  I  H  *  Q  K  N  F  G :   S  L  I  W  K  *  *  K  E  F  K  G  M  V  T  M  M  N  L  W  F  L  S  *  R  T  L  H  M  R  E  N  S  Q  N  L  L  L  K  L :   S  K  L  T  R  K  R  Q  L  C  W  F  A  T  M  V  Y  M  Y  G  E  I  L  G  S  A  L  K  H  S :   L  S  A  T  T  T  S  L  M  L  Q  L  N  Y  I  N  *  E  L  T  G  Q  H  Q  L  M  V  P  F  R  M  Q  K  Y  L  H  L  L  Q  M  A  A  *  S  H  Q  G :   G  A  S  F  W  I  S  K  E  L  L  L  Q  Y  H  L  L  L  R  F  Y  S  L  M  H  V  I  M  L  G  D  I  W  M  Q  H  M  I  Q  Q  R  L  N  R  I  L  S  Y  Y  A  L  K :   C  N  K  T  W  K  M  V  L  L  V  L  C  V  S  Q  L  M  M  L  G  K  W  R  *  L  Q  L  W  S  L  M  L  R  Q  *  L  K  L  T  A  R  L  L  P  *  K  S  Y  R :   G  I  F  G  K  L  G  S  K  T  M  S  *  R  D  L  F  L  M  M  Y  L  Q  L  L  R  N  G  L  L  *  A  S  R :   C  T  Y  T  R  V  A  A  D  W  H  R  G  F  C  L  V  T  Q  N  M  E  T  *  E  N  F  S  M  D  F  L  I  Q  Q  W   : A  T  R  E  K  Q  K  V  M  Q  K  L  L  R  R  W  V  *  I  I  H  Q  R  F  C  L  *  Q  M  S  I  K  K  P  Q  L  Q  R  Q  Q  :  V  W  K  *  *  S  L  S  D  Q  E  T  D  L  F  Q  I  V  T  S  S  G  Q  S  N  H  F  R  R  S  K  D  G  M  C  H  V  L  C  N  I  N  L  I  K  V  G  W  E  L  I  H  R  R  K  S  *  A  K  *  V  S  Y  C  S  S  Y  L  H  D  S  V  S  L  L  F  L  V  V  L  R  C  N  S  F  F  Y  L  C  E  N  Y  C  W  *  L  M  F  S  L  F  H  F  Q  R :   S  N  G  N  S   </first_frame>
            <second_frame>  S  K  R  S  S  E  N  G  D  Y  Q  S  S  I  F  G  R  *  Q  G  Q  R  D  Q  V  L  N  R  *  A  L  P  S  F  L  Q  S  G  M  G  F  R  H  R  R  Q  H  H  H  *  S  T  *  *  I  R  S  *  I  R  T  T  Y  R  Y  V  S  F  W :   G  A  K  G  K  D  G  G  *  G  Y  V  Y  Y  V  I  R  W  V  Y  F  I  C  T  G  G  *  T  Y  P  S  *  T  S  *  V  F  *  L  C  A  S  F  Y  E   : G  I  S  D  A  *  C  W  C  C  Y  P  Q  S  W  N  G  I  L  S  C  N  D  A  Q  S  T  S  K  R  I  S   : D  H  S  Y  G  N  D  K  R  N  S  R  A  W  L  L  *  *  T  C  G  S  Y  H  R  E  H  C  I  *  E  R  T  H  R  I  S  C  *  S   : Y  Q  S  L  P  E  N  D  S  C  A  G  S  Q  P  W  Y  I  C  M  G  R  F  L  D  Q  R  *  N  T   : V  *  V  L  P  L  P  L  *  C  C  N  *  T  T  S  I  R  N  *  L  D  N  T  S  S  W  S  H  S  E  C  K  N  I  C  T  C  S  K  W  Q  H  K  A  I  K   : A  V  H  R  F  G  Y  R  R  N  Y  Y  S  N  I  I  C  Y  *  G  S  I  P  L  C  T  *  *  C  W  E  T  F  G  C  N  I  *  F  S  R  D  S  T  G  Y  *  V  I  T  R  S   : S  A  T  R  P  G  K  W  C  C  W  C  C  V  Y  P  S  *  *  C  W  E  N  G  G  N  C  S  F  G  R  *  C  *  G  N  D  *  S  *  P  Q  D  Y  C  L  E  R  V  T   : G  A  Y  L  A  N  W  V  P  K  Q  *  V  R  G  T  C  F  *  *  C  T  F  S  S  *  E  M  D  C  F  R  R  Q   : G  V  H  I  L  E  W  Q  Q  I  G  T  E  A  F  V  W  S  H  K  T  W  R  P  E  K  I  S  L  W  I  F  *  Y  N  S  G  :  Q  Q  E  R  N  K  K  L  C  R  N  Y  C  V  V  G  C  R  *  S  I  R  D  F  V  C  D  R  C  L  S  R  S  H  S  C  K  G  S  R :   F  G  S  D  N  L  Y  Q  T  R  K  R  T  S  S  R  *  S  R  V  Q  D  S  Q  I  I  F  G  D  L  K  M  G  C  V  M  Y  C  V  T  L  T  *  *  K  *  V  G  S  *  F  I  V  E  K  V  E  P  N  E  S  H  T  A  A  L  I  F  M  I  V  L  V  F  F  F  L  L  Y  *  D  V  I  V  F  F  I  F  V  R  T  I  V  G  D  *  C  F  H  C  S  I  F  K   : D  Q  M  E  T  R  </second_frame>
            <third_frame>   A  N  G  A  L  K  M  A  T  T  S  Q  A  Y  L  E  G  D  K  V  K  E  T  K  S  L  I  A  E  L  C  R  H  F  Y  N  Q  G  W  V  S  G  T  G  G  S  I  T  I  K  V  H  D  E  S  V  P  K  S  E  Q  L  I  V  M  S  P  S   : G  V  Q  K  E  R  M  V  D  E  D  M  Y  I  M  S  S  D  G  S  I  L  S  A  P  V  A  K  P  T  P  H  K  P  P  K  C  S  D  C  A  P  L  F  M  K  :  A  Y  L  M  R  N  A  G  A  V  I  H  S  H  G  M  E  S  C  L  V  T  M  L  N  P  L  A  K  E  F  R  :  I  T  H  M  E  M  I  K  G  I  Q  G  H  G  Y  Y  D  E  L  V  V  P  I  I  E  N  T  A  Y  E  R  E  L  T  E  S  L  A  E  A  :  I  K  A  Y  P  K  T  T  A  V  L  V  R  N  H  G  I  Y  V  W  G  D  S  W  I  S  A  K  T  Q  :  S  E  C  Y  H  Y  L  F  D  A  A  I  K  L  H  Q  L  G  I  D  W  T  T  P  A  H  G  P  I  Q  N  A  K  I  S  A  L  A  P  N  G  S  I  K  P  S  R  :  R  C  I  V  L  D  I  E  G  T  T  T  P  I  S  F  V  T  E  V  L  F  P  Y  A  R  N  N  V  G  R  H  L  D  A  T  Y  D  S  A  E  T  Q  Q  D  I  K  L  L  R  A  Q  :  V  Q  Q  D  L  E  N  G  V  A  G  A  V  C  I  P  A  D  D  A  G  K  M  E  V  I  A  A  L  V  A  N  V  E  A  M  I  K  A  D  R  K  I  T  A  L  K  E  L  Q  :  G  H  I  W  Q  T  G  F  Q  N  N  E  L  E  G  L  V  F  D  D  V  P  S  A  L  E  K  W  T  A  L  G  V  K  :  V  Y  I  Y  S  S  G  S  R  L  A  Q  R  L  L  F  G  H  T  K  H  G  D  L  R  K  F  L  Y  G  F  F  D  T  T  V  G :   N  K  R  E  T  K  S  Y  A  E  I  T  A  S  L  G  V  D  N  P  S  E  I  L  F  V  T  D  V  Y  Q  E  A  T  A  A  K  A  A   : G  L  E  V  I  I  S  I  R  P  G  N  G  P  L  P  D  S  H  E  F  R  T  V  K  S  F  S  E  I  *  R  W  D  V  S  C  I  V  *  H  *  L  N  K  S  R  L  G  V  D  S  S  S  K  K  L  S  Q  M  S  L  I  L  Q  L  L  S  S  *  *  C  *  S  S  F  S  C  C  I  E  M  *  *  F  F  L  S  L  *  E  L  L  L  V  I  D  V  F  I  V  P  F  S  K  :  I  K  W  K  L  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0046G04.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69558" stop="69354"/>
                    <exon start="69267" stop="69131"/>
                    <exon start="68445" stop="68350"/>
                    <exon start="67813" stop="67694"/>
                    <exon start="67486" stop="67397"/>
                    <exon start="67146" stop="67006"/>
                    <exon start="66894" stop="66739"/>
                    <exon start="65565" stop="65416"/>
                    <exon start="65300" stop="65199"/>
                    <exon start="64945" stop="64836"/>
                    <exon start="64752" stop="64634"/>
                    <exon start="64232" stop="64141"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1515</number_coding_nucleotides>
                  <number_encoded_amino_acids>505</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ANGALKMATTSQAYLEGDKVKETKSLIAELCRHFYNQGWVSGTGGSITIKVHDESVPKSEQLIVMSPSGVQKERMVDEDMYIMSSDGSILSAPVAKPTPHKPPKCSDCAPLFMKAYLMRNAGAVIHSHGMESCLVTMLNPLAKEFRITHMEMIKGIQGHGYYDELVVPIIENTAYERELTESLAEAIKAYPKTTAVLVRNHGIYVWGDSWISAKTQSECYHYLFDAAIKLHQLGIDWTTPAHGPIQNAKISALAPNGSIKPSRRCIVLDIEGTTTPISFVTEVLFPYARNNVGRHLDATYDSAETQQDIKLLRAQVQQDLENGVAGAVCIPADDAGKMEVIAALVANVEAMIKADRKITALKELQGHIWQTGFQNNELEGLVFDDVPSALEKWTALGVKVYIYSSGSRLAQRLLFGHTKHGDLRKFLYGFFDTTVGNKRETKSYAEITASLGVDNPSEILFVTDVYQEATAAKAAGLEVIISIRPGNGPLPDSHEFRTVKSFSEI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="68821" e_stop="68350"/>
            <exon e_start="67813" e_stop="67694"/>
            <exon e_start="67486" e_stop="67397"/>
            <exon e_start="67146" e_stop="67006"/>
            <exon e_start="66894" e_stop="66739"/>
            <exon e_start="65565" e_stop="65416"/>
            <exon e_start="65300" e_stop="65199"/>
            <exon e_start="64945" e_stop="64836"/>
            <exon e_start="64752" e_stop="64634"/>
            <exon e_start="64232" e_stop="63919"/>
            <exon e_start="63856" e_stop="63839"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.935" acc_prob="0.996" e_score="0.996"/>
          <exon-intron don_prob="0.957" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.968" acc_prob="1.000" e_score="0.994"/>
          <exon-intron don_prob="0.431" acc_prob="0.943" e_score="0.987"/>
          <exon-intron don_prob="0.970" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.885" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.915" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.956" e_score="0.997"/>
          <exon-only e_score="0.389"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="68821" e_stop="68350" e_length="472"/>
          </exon>
          <intron i_serial="1" don_prob="0.935" acc_prob="0.996">
            <gDNA_intron_boundary i_start="68349" i_stop="67814" i_length="536"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="67813" e_stop="67694" e_length="120"/>
          </exon>
          <intron i_serial="2" don_prob="0.957" acc_prob="0.994">
            <gDNA_intron_boundary i_start="67693" i_stop="67487" i_length="207"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="67486" e_stop="67397" e_length="90"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="67396" i_stop="67147" i_length="250"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="67146" e_stop="67006" e_length="141"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.992">
            <gDNA_intron_boundary i_start="67005" i_stop="66895" i_length="111"/>
          </intron>
          <exon e_serial="5" e_score="0.994">
            <gDNA_exon_boundary e_start="66894" e_stop="66739" e_length="156"/>
          </exon>
          <intron i_serial="5" don_prob="0.968" acc_prob="1.000">
            <gDNA_intron_boundary i_start="66738" i_stop="65566" i_length="1173"/>
          </intron>
          <exon e_serial="6" e_score="0.987">
            <gDNA_exon_boundary e_start="65565" e_stop="65416" e_length="150"/>
          </exon>
          <intron i_serial="6" don_prob="0.431" acc_prob="0.943">
            <gDNA_intron_boundary i_start="65415" i_stop="65301" i_length="115"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="65300" e_stop="65199" e_length="102"/>
          </exon>
          <intron i_serial="7" don_prob="0.970" acc_prob="0.983">
            <gDNA_intron_boundary i_start="65198" i_stop="64946" i_length="253"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="64945" e_stop="64836" e_length="110"/>
          </exon>
          <intron i_serial="8" don_prob="0.885" acc_prob="0.983">
            <gDNA_intron_boundary i_start="64835" i_stop="64753" i_length="83"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="64752" e_stop="64634" e_length="119"/>
          </exon>
          <intron i_serial="9" don_prob="0.995" acc_prob="0.915">
            <gDNA_intron_boundary i_start="64633" i_stop="64233" i_length="401"/>
          </intron>
          <exon e_serial="10" e_score="0.997">
            <gDNA_exon_boundary e_start="64232" e_stop="63919" e_length="314"/>
          </exon>
          <intron i_serial="10" don_prob="0.900" acc_prob="0.956">
            <gDNA_intron_boundary i_start="63918" i_stop="63857" i_length="62"/>
          </intron>
          <exon e_serial="11" e_score="0.389">
            <gDNA_exon_boundary e_start="63856" e_stop="63839" e_length="18"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68821" stop="68350"/>
              <exon start="67813" stop="67694"/>
              <exon start="67486" stop="67397"/>
              <exon start="67146" stop="67080"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E739745" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68428" stop="68350"/>
              <exon start="67813" stop="67694"/>
              <exon start="67486" stop="67397"/>
              <exon start="67146" stop="67006"/>
              <exon start="66894" stop="66739"/>
              <exon start="65565" stop="65506"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E399895" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68420" stop="68350"/>
              <exon start="67813" stop="67694"/>
              <exon start="67486" stop="67397"/>
              <exon start="67146" stop="67006"/>
              <exon start="66894" stop="66739"/>
              <exon start="65565" stop="65433"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464325" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68398" stop="68350"/>
              <exon start="67813" stop="67694"/>
              <exon start="67486" stop="67397"/>
              <exon start="67146" stop="67006"/>
              <exon start="66894" stop="66739"/>
              <exon start="65565" stop="65500"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E458144" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67788" stop="67694"/>
              <exon start="67486" stop="67397"/>
              <exon start="67146" stop="67006"/>
              <exon start="66894" stop="66740"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208185" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67788" stop="67694"/>
              <exon start="67486" stop="67397"/>
              <exon start="67146" stop="67006"/>
              <exon start="66894" stop="66802"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E376563" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67778" stop="67694"/>
              <exon start="67486" stop="67397"/>
              <exon start="67146" stop="67015"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E288155" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67103" stop="67006"/>
              <exon start="66894" stop="66748"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E305408" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66885" stop="66739"/>
              <exon start="65565" stop="65416"/>
              <exon start="65300" stop="65199"/>
              <exon start="64945" stop="64836"/>
              <exon start="64752" stop="64634"/>
              <exon start="64232" stop="64156"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E455616" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65485" stop="65416"/>
              <exon start="65300" stop="65199"/>
              <exon start="64945" stop="64836"/>
              <exon start="64752" stop="64634"/>
              <exon start="64232" stop="64167"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238220" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64736" stop="64634"/>
              <exon start="64232" stop="63919"/>
              <exon start="63856" stop="63839"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351274" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGGGATTAGATTACACTGGGATGTTGTTGTTGTATTGTATTTGTTCTTTCTCAGTGTAATTGTTATGTTATCCGTAGTCCTTTCTTTGTTTTTGTCTAGCTCAACAAACTTAGCATATTTCATATCTCGCGGTATCATGTTATTATTTCTCTGCTGCCATCTTTTGAATTTGTTTTGTCTCTCTAAATAATCTAGTAACAGCCAGGATCCATGATTTTTTGTGTTGTAGACTGCAGTTACTGAGATATAGCATGACTTCTTTGGAATGGAGAGTGTGATCTCATATTAGTTGATCTATAAATAAATGATTCTCTTTTTCTTTTTGATTGACTATTCTACTCCGCTGATTGTAATTTTTTTCTTTTTTTTTCCTCAGGCATATCTGATGCGTAATGCTGGTGCTGTTATCCACAGTCATGGAATGGAATCCTGTCTTGTAACGATGCTCAATCCACTAGCAAAAGAATTTCGG : ATCACTCATATGGAAATGATAAAAGGAATTCAAGGGCATGGTTACTATGATGAACTTGTGGTTCCTATCATAGAGAACACTGCATATGAGAGAGAACTCACAGAATCTCTTGCTGAAGCT : ATCAAAGCTTACCCGAAAACGACAGCTGTGCTGGTTCGCAACCATGGTATATATGTATGGGGAGATTCTTGGATCAGCGCTAAAACACAG : TCTGAGTGCTACCACTACCTCTTTGATGCTGCAATTAAACTACATCAATTAGGAATTGACTGGACAACACCAGCTCATGGTCCCATTCAGAATGCAAAAATATCTGCACTTGCTCCAAATGGCAGCATAAAGCCATCAAGG : CGGTGCATCGTTTTGGATATCGAAGGAACTACTACTCCAATATCATTTGTTACTGAGGTTCTATTCCCTTATGCACGTAATAATGTTGGGAGACATTTGGATGCAACATATGATTCAGCAGAGACTCAACAGGATATTAAGTTATTACGCGCTCAA : GTGCAACAAGACCTGGAAAATGGTGTTGCTGGTGCTGTGTGTATCCCAGCTGATGATGCTGGGAAAATGGAGGTAATTGCAGCTTTGGTCGCTAATGTTGAGGCAATGATTAAAGCTGACCGCAAGATTACTGCCTTGAAAGAGTTACAG : GGGCATATTTGGCAAACTGGGTTCCAAAACAATGAGTTAGAGGGACTTGTTTTTGATGATGTACCTTCAGCTCTTGAGAAATGGACTGCTTTAGGCGTCAAG : GTGTACATATACTCGAGTGGCAGCAGATTGGCACAGAGGCTTTTGTTTGGTCACACAAAACATGGAGACCTGAGAAAATTTCTCTATGGATTTTTTGATACAACAGTGGG : CAACAAGAGAGAAACAAAAAGTTATGCAGAAATTACTGCGTCGTTGGGTGTAGATAATCCATCAGAGATTTTGTTTGTGACAGATGTCTATCAAGAAGCCACAGCTGCAAAGGCAGCAG : GTTTGGAAGTGATAATCTCTATCAGACCAGGAAACGGACCTCTTCCAGATAGTCACGAGTTCAGGACAGTCAAATCATTTTCGGAGATCTAAAGATGGGATGTGTCATGTATTGTGTAACATTAACTTAATAAAAGTAGGTTGGGAGTTGATTCATCGTCGAAAAAGTTGAGCCAAATGAGTCTCATACTGCAGCTCTTATCTTCATGATAGTGTTAGTCTTCTTTTTCTTGTTGTATTGAGATGTAATAGTTTTTTTTATCTTTGTGAGAACTATTGTTGGTGATTGATGTTTTCATTGTTCCATTTTCAAAG : ATCAAATGGAAACTCGCG</gDNA_template>
            <first_frame> W  D  *  I  T  L  G  C  C  C  C  I  V  F  V  L  S  Q  C  N  C  Y  V  I  R  S  P  F  F  V  F  V  *  L  N  K  L  S  I  F  H  I  S  R  Y  H  V  I  I  S  L  L  P  S  F  E  F  V  L  S  L  *  I  I  *  *  Q  P  G  S  M  I  F  C  V  V  D  C  S  Y  *  D  I  A  *  L  L  W  N  G  E  C  D  L  I  L  V  D  L  *  I  N  D  S  L  F  L  F  D  *  L  F  Y  S  A  D  C  N  F  F  L  F  F  S  S  G  I  S  D  A  *  C  W  C  C  Y  P  Q  S  W  N  G  I  L  S  C  N  D  A  Q  S  T  S  K  R  I  S   : D  H  S  Y  G  N  D  K  R  N  S  R  A  W  L  L  *  *  T  C  G  S  Y  H  R  E  H  C  I  *  E  R  T  H  R  I  S  C  *  S   : Y  Q  S  L  P  E  N  D  S  C  A  G  S  Q  P  W  Y  I  C  M  G  R  F  L  D  Q  R  *  N  T   : V  *  V  L  P  L  P  L  *  C  C  N  *  T  T  S  I  R  N  *  L  D  N  T  S  S  W  S  H  S  E  C  K  N  I  C  T  C  S  K  W  Q  H  K  A  I  K   : A  V  H  R  F  G  Y  R  R  N  Y  Y  S  N  I  I  C  Y  *  G  S  I  P  L  C  T  *  *  C  W  E  T  F  G  C  N  I  *  F  S  R  D  S  T  G  Y  *  V  I  T  R  S   : S  A  T  R  P  G  K  W  C  C  W  C  C  V  Y  P  S  *  *  C  W  E  N  G  G  N  C  S  F  G  R  *  C  *  G  N  D  *  S  *  P  Q  D  Y  C  L  E  R  V  T   : G  A  Y  L  A  N  W  V  P  K  Q  *  V  R  G  T  C  F  *  *  C  T  F  S  S  *  E  M  D  C  F  R  R  Q   : G  V  H  I  L  E  W  Q  Q  I  G  T  E  A  F  V  W  S  H  K  T  W  R  P  E  K  I  S  L  W  I  F  *  Y  N  S  G  :  Q  Q  E  R  N  K  K  L  C  R  N  Y  C  V  V  G  C  R  *  S  I  R  D  F  V  C  D  R  C  L  S  R  S  H  S  C  K  G  S  R :   F  G  S  D  N  L  Y  Q  T  R  K  R  T  S  S  R  *  S  R  V  Q  D  S  Q  I  I  F  G  D  L  K  M  G  C  V  M  Y  C  V  T  L  T  *  *  K  *  V  G  S  *  F  I  V  E  K  V  E  P  N  E  S  H  T  A  A  L  I  F  M  I  V  L  V  F  F  F  L  L  Y  *  D  V  I  V  F  F  I  F  V  R  T  I  V  G  D  *  C  F  H  C  S  I  F  K   : D  Q  M  E  T  R  </first_frame>
            <second_frame>  G  I  R  L  H  W  D  V  V  V  V  L  Y  L  F  F  L  S  V  I  V  M  L  S  V  V  L  S  L  F  L  S  S  S  T  N  L  A  Y  F  I  S  R  G  I  M  L  L  F  L  C  C  H  L  L  N  L  F  C  L  S  K  *  S  S  N  S  Q  D  P  *  F  F  V  L  *  T  A  V  T  E  I  *  H  D  F  F  G  M  E  S  V  I  S  Y  *  L  I  Y  K  *  M  I  L  F  F  F  L  I  D  Y  S  T  P  L  I  V  I  F  F  F  F  F  P  Q  A  Y  L  M  R  N  A  G  A  V  I  H  S  H  G  M  E  S  C  L  V  T  M  L  N  P  L  A  K  E  F  R  :  I  T  H  M  E  M  I  K  G  I  Q  G  H  G  Y  Y  D  E  L  V  V  P  I  I  E  N  T  A  Y  E  R  E  L  T  E  S  L  A  E  A  :  I  K  A  Y  P  K  T  T  A  V  L  V  R  N  H  G  I  Y  V  W  G  D  S  W  I  S  A  K  T  Q  :  S  E  C  Y  H  Y  L  F  D  A  A  I  K  L  H  Q  L  G  I  D  W  T  T  P  A  H  G  P  I  Q  N  A  K  I  S  A  L  A  P  N  G  S  I  K  P  S  R  :  R  C  I  V  L  D  I  E  G  T  T  T  P  I  S  F  V  T  E  V  L  F  P  Y  A  R  N  N  V  G  R  H  L  D  A  T  Y  D  S  A  E  T  Q  Q  D  I  K  L  L  R  A  Q  :  V  Q  Q  D  L  E  N  G  V  A  G  A  V  C  I  P  A  D  D  A  G  K  M  E  V  I  A  A  L  V  A  N  V  E  A  M  I  K  A  D  R  K  I  T  A  L  K  E  L  Q  :  G  H  I  W  Q  T  G  F  Q  N  N  E  L  E  G  L  V  F  D  D  V  P  S  A  L  E  K  W  T  A  L  G  V  K  :  V  Y  I  Y  S  S  G  S  R  L  A  Q  R  L  L  F  G  H  T  K  H  G  D  L  R  K  F  L  Y  G  F  F  D  T  T  V  G :   N  K  R  E  T  K  S  Y  A  E  I  T  A  S  L  G  V  D  N  P  S  E  I  L  F  V  T  D  V  Y  Q  E  A  T  A  A  K  A  A   : G  L  E  V  I  I  S  I  R  P  G  N  G  P  L  P  D  S  H  E  F  R  T  V  K  S  F  S  E  I  *  R  W  D  V  S  C  I  V  *  H  *  L  N  K  S  R  L  G  V  D  S  S  S  K  K  L  S  Q  M  S  L  I  L  Q  L  L  S  S  *  *  C  *  S  S  F  S  C  C  I  E  M  *  *  F  F  L  S  L  *  E  L  L  L  V  I  D  V  F  I  V  P  F  S  K  :  I  K  W  K  L  A </second_frame>
            <third_frame>   G  L  D  Y  T  G  M  L  L  L  Y  C  I  C  S  F  S  V  *  L  L  C  Y  P  *  S  F  L  C  F  C  L  A  Q  Q  T  *  H  I  S  Y  L  A  V  S  C  Y  Y  F  S  A  A  I  F  *  I  C  F  V  S  L  N  N  L  V  T  A  R  I  H  D  F  L  C  C  R  L  Q  L  L  R  Y  S  M  T  S  L  E  W  R  V  *  S  H  I  S  *  S  I  N  K  *  F  S  F  S  F  *  L  T  I  L  L  R  *  L  *  F  F  S  F  F  F  L  R  H  I  *  C  V  M  L  V  L  L  S  T  V  M  E  W  N  P  V  L  *  R  C  S  I  H  *  Q  K  N  F  G :   S  L  I  W  K  *  *  K  E  F  K  G  M  V  T  M  M  N  L  W  F  L  S  *  R  T  L  H  M  R  E  N  S  Q  N  L  L  L  K  L :   S  K  L  T  R  K  R  Q  L  C  W  F  A  T  M  V  Y  M  Y  G  E  I  L  G  S  A  L  K  H  S :   L  S  A  T  T  T  S  L  M  L  Q  L  N  Y  I  N  *  E  L  T  G  Q  H  Q  L  M  V  P  F  R  M  Q  K  Y  L  H  L  L  Q  M  A  A  *  S  H  Q  G :   G  A  S  F  W  I  S  K  E  L  L  L  Q  Y  H  L  L  L  R  F  Y  S  L  M  H  V  I  M  L  G  D  I  W  M  Q  H  M  I  Q  Q  R  L  N  R  I  L  S  Y  Y  A  L  K :   C  N  K  T  W  K  M  V  L  L  V  L  C  V  S  Q  L  M  M  L  G  K  W  R  *  L  Q  L  W  S  L  M  L  R  Q  *  L  K  L  T  A  R  L  L  P  *  K  S  Y  R :   G  I  F  G  K  L  G  S  K  T  M  S  *  R  D  L  F  L  M  M  Y  L  Q  L  L  R  N  G  L  L  *  A  S  R :   C  T  Y  T  R  V  A  A  D  W  H  R  G  F  C  L  V  T  Q  N  M  E  T  *  E  N  F  S  M  D  F  L  I  Q  Q  W   : A  T  R  E  K  Q  K  V  M  Q  K  L  L  R  R  W  V  *  I  I  H  Q  R  F  C  L  *  Q  M  S  I  K  K  P  Q  L  Q  R  Q  Q  :  V  W  K  *  *  S  L  S  D  Q  E  T  D  L  F  Q  I  V  T  S  S  G  Q  S  N  H  F  R  R  S  K  D  G  M  C  H  V  L  C  N  I  N  L  I  K  V  G  W  E  L  I  H  R  R  K  S  *  A  K  *  V  S  Y  C  S  S  Y  L  H  D  S  V  S  L  L  F  L  V  V  L  R  C  N  S  F  F  Y  L  C  E  N  Y  C  W  *  L  M  F  S  L  F  H  F  Q  R :   S  N  G  N  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0046G04.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68517" stop="68350"/>
                    <exon start="67813" stop="67694"/>
                    <exon start="67486" stop="67397"/>
                    <exon start="67146" stop="67006"/>
                    <exon start="66894" stop="66739"/>
                    <exon start="65565" stop="65416"/>
                    <exon start="65300" stop="65199"/>
                    <exon start="64945" stop="64836"/>
                    <exon start="64752" stop="64634"/>
                    <exon start="64232" stop="64141"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1245</number_coding_nucleotides>
                  <number_encoded_amino_acids>415</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MILFFFLIDYSTPLIVIFFFFFPQAYLMRNAGAVIHSHGMESCLVTMLNPLAKEFRITHMEMIKGIQGHGYYDELVVPIIENTAYERELTESLAEAIKAYPKTTAVLVRNHGIYVWGDSWISAKTQSECYHYLFDAAIKLHQLGIDWTTPAHGPIQNAKISALAPNGSIKPSRRCIVLDIEGTTTPISFVTEVLFPYARNNVGRHLDATYDSAETQQDIKLLRAQVQQDLENGVAGAVCIPADDAGKMEVIAALVANVEAMIKADRKITALKELQGHIWQTGFQNNELEGLVFDDVPSALEKWTALGVKVYIYSSGSRLAQRLLFGHTKHGDLRKFLYGFFDTTVGNKRETKSYAEITASLGVDNPSEILFVTDVYQEATAAKAAGLEVIISIRPGNGPLPDSHEFRTVKSFSEI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="69560" e_stop="69354"/>
            <exon e_start="69267" e_stop="69131"/>
            <exon e_start="68445" e_stop="68350"/>
            <exon e_start="67813" e_stop="67694"/>
            <exon e_start="67486" e_stop="67397"/>
            <exon e_start="67147" e_stop="67006"/>
            <exon e_start="66894" e_stop="66739"/>
            <exon e_start="65565" e_stop="65416"/>
            <exon e_start="65300" e_stop="65199"/>
            <exon e_start="64945" e_stop="64836"/>
            <exon e_start="64752" e_stop="64634"/>
            <exon e_start="64232" e_stop="63919"/>
            <exon e_start="63856" e_stop="63839"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.779" acc_prob="1.000" e_score="0.990"/>
          <exon-intron don_prob="0.958" acc_prob="1.000" e_score="0.978"/>
          <exon-intron don_prob="0.935" acc_prob="0.996" e_score="0.979"/>
          <exon-intron don_prob="0.957" acc_prob="0.994" e_score="0.992"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.911"/>
          <exon-intron don_prob="0.998" acc_prob="0.992" e_score="0.990"/>
          <exon-intron don_prob="0.968" acc_prob="1.000" e_score="0.993"/>
          <exon-intron don_prob="0.431" acc_prob="0.943" e_score="0.987"/>
          <exon-intron don_prob="0.970" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.885" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.915" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.956" e_score="0.997"/>
          <exon-only e_score="0.389"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="69560" e_stop="69354" e_length="207"/>
          </exon>
          <intron i_serial="1" don_prob="0.779" acc_prob="1.000">
            <gDNA_intron_boundary i_start="69353" i_stop="69268" i_length="86"/>
          </intron>
          <exon e_serial="2" e_score="0.978">
            <gDNA_exon_boundary e_start="69267" e_stop="69131" e_length="137"/>
          </exon>
          <intron i_serial="2" don_prob="0.958" acc_prob="1.000">
            <gDNA_intron_boundary i_start="69130" i_stop="68446" i_length="685"/>
          </intron>
          <exon e_serial="3" e_score="0.979">
            <gDNA_exon_boundary e_start="68445" e_stop="68350" e_length="96"/>
          </exon>
          <intron i_serial="3" don_prob="0.935" acc_prob="0.996">
            <gDNA_intron_boundary i_start="68349" i_stop="67814" i_length="536"/>
          </intron>
          <exon e_serial="4" e_score="0.992">
            <gDNA_exon_boundary e_start="67813" e_stop="67694" e_length="120"/>
          </exon>
          <intron i_serial="4" don_prob="0.957" acc_prob="0.994">
            <gDNA_intron_boundary i_start="67693" i_stop="67487" i_length="207"/>
          </intron>
          <exon e_serial="5" e_score="0.911">
            <gDNA_exon_boundary e_start="67486" e_stop="67397" e_length="90"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="67396" i_stop="67148" i_length="249"/>
          </intron>
          <exon e_serial="6" e_score="0.990">
            <gDNA_exon_boundary e_start="67147" e_stop="67006" e_length="142"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.992">
            <gDNA_intron_boundary i_start="67005" i_stop="66895" i_length="111"/>
          </intron>
          <exon e_serial="7" e_score="0.993">
            <gDNA_exon_boundary e_start="66894" e_stop="66739" e_length="156"/>
          </exon>
          <intron i_serial="7" don_prob="0.968" acc_prob="1.000">
            <gDNA_intron_boundary i_start="66738" i_stop="65566" i_length="1173"/>
          </intron>
          <exon e_serial="8" e_score="0.987">
            <gDNA_exon_boundary e_start="65565" e_stop="65416" e_length="150"/>
          </exon>
          <intron i_serial="8" don_prob="0.431" acc_prob="0.943">
            <gDNA_intron_boundary i_start="65415" i_stop="65301" i_length="115"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="65300" e_stop="65199" e_length="102"/>
          </exon>
          <intron i_serial="9" don_prob="0.970" acc_prob="0.983">
            <gDNA_intron_boundary i_start="65198" i_stop="64946" i_length="253"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="64945" e_stop="64836" e_length="110"/>
          </exon>
          <intron i_serial="10" don_prob="0.885" acc_prob="0.983">
            <gDNA_intron_boundary i_start="64835" i_stop="64753" i_length="83"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="64752" e_stop="64634" e_length="119"/>
          </exon>
          <intron i_serial="11" don_prob="0.995" acc_prob="0.915">
            <gDNA_intron_boundary i_start="64633" i_stop="64233" i_length="401"/>
          </intron>
          <exon e_serial="12" e_score="0.997">
            <gDNA_exon_boundary e_start="64232" e_stop="63919" e_length="314"/>
          </exon>
          <intron i_serial="12" don_prob="0.900" acc_prob="0.956">
            <gDNA_intron_boundary i_start="63918" i_stop="63857" i_length="62"/>
          </intron>
          <exon e_serial="13" e_score="0.389">
            <gDNA_exon_boundary e_start="63856" e_stop="63839" e_length="18"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69560" stop="69354"/>
              <exon start="69267" stop="69131"/>
              <exon start="68445" stop="68350"/>
              <exon start="67813" stop="67700"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E441052" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69558" stop="69354"/>
              <exon start="69267" stop="69131"/>
              <exon start="68445" stop="68350"/>
              <exon start="67813" stop="67694"/>
              <exon start="67486" stop="67397"/>
              <exon start="67147" stop="67085"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E478940" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69558" stop="69354"/>
              <exon start="69267" stop="69197"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E457108" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69557" stop="69354"/>
              <exon start="69267" stop="69131"/>
              <exon start="68445" stop="68350"/>
              <exon start="67813" stop="67694"/>
              <exon start="67486" stop="67397"/>
              <exon start="67147" stop="67092"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589528" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69546" stop="69354"/>
              <exon start="69267" stop="69131"/>
              <exon start="68445" stop="68350"/>
              <exon start="67813" stop="67694"/>
              <exon start="67486" stop="67455"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E486460" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69546" stop="69354"/>
              <exon start="69267" stop="69131"/>
              <exon start="68445" stop="68350"/>
              <exon start="67813" stop="67764"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E472517" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67103" stop="67006"/>
              <exon start="66894" stop="66748"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E305408" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66885" stop="66739"/>
              <exon start="65565" stop="65416"/>
              <exon start="65300" stop="65199"/>
              <exon start="64945" stop="64836"/>
              <exon start="64752" stop="64634"/>
              <exon start="64232" stop="64156"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E455616" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65485" stop="65416"/>
              <exon start="65300" stop="65199"/>
              <exon start="64945" stop="64836"/>
              <exon start="64752" stop="64634"/>
              <exon start="64232" stop="64167"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238220" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64736" stop="64634"/>
              <exon start="64232" stop="63919"/>
              <exon start="63856" stop="63839"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351274" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAGCAAACGGAGCTCTGAAAATGGCGACTACCAGTCAAGCATATTTGGAAGGTGACAAGGTCAAAGAGACCAAGTCCTTAATCGCTGAGCTTTGCCGTCATTTCTACAATCAGGGATGGGTTTCCGGCACCGGCGGCAGCATCACCATTAAAGTACATGATGAATCCGTTCCTAAATCCGAACAACTTATCGTTATGTCTCCTTCTG : GGGTGCAAAAGGAAAGGATGGTGGATGAGGATATGTATATTATGTCATCAGATGGGTCTATTTTATCTGCACCGGTGGCTAAACCTACCCCTCATAAACCTCCTAAGTGTTCTGATTGTGCGCCTCTTTTTATGAAG : GCATATCTGATGCGTAATGCTGGTGCTGTTATCCACAGTCATGGAATGGAATCCTGTCTTGTAACGATGCTCAATCCACTAGCAAAAGAATTTCGG : ATCACTCATATGGAAATGATAAAAGGAATTCAAGGGCATGGTTACTATGATGAACTTGTGGTTCCTATCATAGAGAACACTGCATATGAGAGAGAACTCACAGAATCTCTTGCTGAAGCT : ATCAAAGCTTACCCGAAAACGACAGCTGTGCTGGTTCGCAACCATGGTATATATGTATGGGGAGATTCTTGGATCAGCGCTAAAACACAG : GTCTGAGTGCTACCACTACCTCTTTGATGCTGCAATTAAACTACATCAATTAGGAATTGACTGGACAACACCAGCTCATGGTCCCATTCAGAATGCAAAAATATCTGCACTTGCTCCAAATGGCAGCATAAAGCCATCAAGG : CGGTGCATCGTTTTGGATATCGAAGGAACTACTACTCCAATATCATTTGTTACTGAGGTTCTATTCCCTTATGCACGTAATAATGTTGGGAGACATTTGGATGCAACATATGATTCAGCAGAGACTCAACAGGATATTAAGTTATTACGCGCTCAA : GTGCAACAAGACCTGGAAAATGGTGTTGCTGGTGCTGTGTGTATCCCAGCTGATGATGCTGGGAAAATGGAGGTAATTGCAGCTTTGGTCGCTAATGTTGAGGCAATGATTAAAGCTGACCGCAAGATTACTGCCTTGAAAGAGTTACAG : GGGCATATTTGGCAAACTGGGTTCCAAAACAATGAGTTAGAGGGACTTGTTTTTGATGATGTACCTTCAGCTCTTGAGAAATGGACTGCTTTAGGCGTCAAG : GTGTACATATACTCGAGTGGCAGCAGATTGGCACAGAGGCTTTTGTTTGGTCACACAAAACATGGAGACCTGAGAAAATTTCTCTATGGATTTTTTGATACAACAGTGGG : CAACAAGAGAGAAACAAAAAGTTATGCAGAAATTACTGCGTCGTTGGGTGTAGATAATCCATCAGAGATTTTGTTTGTGACAGATGTCTATCAAGAAGCCACAGCTGCAAAGGCAGCAG : GTTTGGAAGTGATAATCTCTATCAGACCAGGAAACGGACCTCTTCCAGATAGTCACGAGTTCAGGACAGTCAAATCATTTTCGGAGATCTAAAGATGGGATGTGTCATGTATTGTGTAACATTAACTTAATAAAAGTAGGTTGGGAGTTGATTCATCGTCGAAAAAGTTGAGCCAAATGAGTCTCATACTGCAGCTCTTATCTTCATGATAGTGTTAGTCTTCTTTTTCTTGTTGTATTGAGATGTAATAGTTTTTTTTATCTTTGTGAGAACTATTGTTGGTGATTGATGTTTTCATTGTTCCATTTTCAAAG : ATCAAATGGAAACTCGCG</gDNA_template>
            <first_frame> Q  Q  T  E  L  *  K  W  R  L  P  V  K  H  I  W  K  V  T  R  S  K  R  P  S  P  *  S  L  S  F  A  V  I  S  T  I  R  D  G  F  P  A  P  A  A  A  S  P  L  K  Y  M  M  N  P  F  L  N  P  N  N  L  S  L  C  L  L  L  :  G  C  K  R  K  G  W  W  M  R  I  C  I  L  C  H  Q  M  G  L  F  Y  L  H  R  W  L  N  L  P  L  I  N  L  L  S  V  L  I  V  R  L  F  L  *  R :   H  I  *  C  V  M  L  V  L  L  S  T  V  M  E  W  N  P  V  L  *  R  C  S  I  H  *  Q  K  N  F  G :   S  L  I  W  K  *  *  K  E  F  K  G  M  V  T  M  M  N  L  W  F  L  S  *  R  T  L  H  M  R  E  N  S  Q  N  L  L  L  K  L :   S  K  L  T  R  K  R  Q  L  C  W  F  A  T  M  V  Y  M  Y  G  E  I  L  G  S  A  L  K  H  R :   S  E  C  Y  H  Y  L  F  D  A  A  I  K  L  H  Q  L  G  I  D  W  T  T  P  A  H  G  P  I  Q  N  A  K  I  S  A  L  A  P  N  G  S  I  K  P  S  R  :  R  C  I  V  L  D  I  E  G  T  T  T  P  I  S  F  V  T  E  V  L  F  P  Y  A  R  N  N  V  G  R  H  L  D  A  T  Y  D  S  A  E  T  Q  Q  D  I  K  L  L  R  A  Q  :  V  Q  Q  D  L  E  N  G  V  A  G  A  V  C  I  P  A  D  D  A  G  K  M  E  V  I  A  A  L  V  A  N  V  E  A  M  I  K  A  D  R  K  I  T  A  L  K  E  L  Q  :  G  H  I  W  Q  T  G  F  Q  N  N  E  L  E  G  L  V  F  D  D  V  P  S  A  L  E  K  W  T  A  L  G  V  K  :  V  Y  I  Y  S  S  G  S  R  L  A  Q  R  L  L  F  G  H  T  K  H  G  D  L  R  K  F  L  Y  G  F  F  D  T  T  V  G :   N  K  R  E  T  K  S  Y  A  E  I  T  A  S  L  G  V  D  N  P  S  E  I  L  F  V  T  D  V  Y  Q  E  A  T  A  A  K  A  A   : G  L  E  V  I  I  S  I  R  P  G  N  G  P  L  P  D  S  H  E  F  R  T  V  K  S  F  S  E  I  *  R  W  D  V  S  C  I  V  *  H  *  L  N  K  S  R  L  G  V  D  S  S  S  K  K  L  S  Q  M  S  L  I  L  Q  L  L  S  S  *  *  C  *  S  S  F  S  C  C  I  E  M  *  *  F  F  L  S  L  *  E  L  L  L  V  I  D  V  F  I  V  P  F  S  K  :  I  K  W  K  L  A </first_frame>
            <second_frame>  S  K  R  S  S  E  N  G  D  Y  Q  S  S  I  F  G  R  *  Q  G  Q  R  D  Q  V  L  N  R  *  A  L  P  S  F  L  Q  S  G  M  G  F  R  H  R  R  Q  H  H  H  *  S  T  *  *  I  R  S  *  I  R  T  T  Y  R  Y  V  S  F  W :   G  A  K  G  K  D  G  G  *  G  Y  V  Y  Y  V  I  R  W  V  Y  F  I  C  T  G  G  *  T  Y  P  S  *  T  S  *  V  F  *  L  C  A  S  F  Y  E   : G  I  S  D  A  *  C  W  C  C  Y  P  Q  S  W  N  G  I  L  S  C  N  D  A  Q  S  T  S  K  R  I  S   : D  H  S  Y  G  N  D  K  R  N  S  R  A  W  L  L  *  *  T  C  G  S  Y  H  R  E  H  C  I  *  E  R  T  H  R  I  S  C  *  S   : Y  Q  S  L  P  E  N  D  S  C  A  G  S  Q  P  W  Y  I  C  M  G  R  F  L  D  Q  R  *  N  T   : G  L  S  A  T  T  T  S  L  M  L  Q  L  N  Y  I  N  *  E  L  T  G  Q  H  Q  L  M  V  P  F  R  M  Q  K  Y  L  H  L  L  Q  M  A  A  *  S  H  Q  G :   G  A  S  F  W  I  S  K  E  L  L  L  Q  Y  H  L  L  L  R  F  Y  S  L  M  H  V  I  M  L  G  D  I  W  M  Q  H  M  I  Q  Q  R  L  N  R  I  L  S  Y  Y  A  L  K :   C  N  K  T  W  K  M  V  L  L  V  L  C  V  S  Q  L  M  M  L  G  K  W  R  *  L  Q  L  W  S  L  M  L  R  Q  *  L  K  L  T  A  R  L  L  P  *  K  S  Y  R :   G  I  F  G  K  L  G  S  K  T  M  S  *  R  D  L  F  L  M  M  Y  L  Q  L  L  R  N  G  L  L  *  A  S  R :   C  T  Y  T  R  V  A  A  D  W  H  R  G  F  C  L  V  T  Q  N  M  E  T  *  E  N  F  S  M  D  F  L  I  Q  Q  W   : A  T  R  E  K  Q  K  V  M  Q  K  L  L  R  R  W  V  *  I  I  H  Q  R  F  C  L  *  Q  M  S  I  K  K  P  Q  L  Q  R  Q  Q  :  V  W  K  *  *  S  L  S  D  Q  E  T  D  L  F  Q  I  V  T  S  S  G  Q  S  N  H  F  R  R  S  K  D  G  M  C  H  V  L  C  N  I  N  L  I  K  V  G  W  E  L  I  H  R  R  K  S  *  A  K  *  V  S  Y  C  S  S  Y  L  H  D  S  V  S  L  L  F  L  V  V  L  R  C  N  S  F  F  Y  L  C  E  N  Y  C  W  *  L  M  F  S  L  F  H  F  Q  R :   S  N  G  N  S   </second_frame>
            <third_frame>   A  N  G  A  L  K  M  A  T  T  S  Q  A  Y  L  E  G  D  K  V  K  E  T  K  S  L  I  A  E  L  C  R  H  F  Y  N  Q  G  W  V  S  G  T  G  G  S  I  T  I  K  V  H  D  E  S  V  P  K  S  E  Q  L  I  V  M  S  P  S   : G  V  Q  K  E  R  M  V  D  E  D  M  Y  I  M  S  S  D  G  S  I  L  S  A  P  V  A  K  P  T  P  H  K  P  P  K  C  S  D  C  A  P  L  F  M  K  :  A  Y  L  M  R  N  A  G  A  V  I  H  S  H  G  M  E  S  C  L  V  T  M  L  N  P  L  A  K  E  F  R  :  I  T  H  M  E  M  I  K  G  I  Q  G  H  G  Y  Y  D  E  L  V  V  P  I  I  E  N  T  A  Y  E  R  E  L  T  E  S  L  A  E  A  :  I  K  A  Y  P  K  T  T  A  V  L  V  R  N  H  G  I  Y  V  W  G  D  S  W  I  S  A  K  T  Q  :  V  *  V  L  P  L  P  L  *  C  C  N  *  T  T  S  I  R  N  *  L  D  N  T  S  S  W  S  H  S  E  C  K  N  I  C  T  C  S  K  W  Q  H  K  A  I  K   : A  V  H  R  F  G  Y  R  R  N  Y  Y  S  N  I  I  C  Y  *  G  S  I  P  L  C  T  *  *  C  W  E  T  F  G  C  N  I  *  F  S  R  D  S  T  G  Y  *  V  I  T  R  S   : S  A  T  R  P  G  K  W  C  C  W  C  C  V  Y  P  S  *  *  C  W  E  N  G  G  N  C  S  F  G  R  *  C  *  G  N  D  *  S  *  P  Q  D  Y  C  L  E  R  V  T   : G  A  Y  L  A  N  W  V  P  K  Q  *  V  R  G  T  C  F  *  *  C  T  F  S  S  *  E  M  D  C  F  R  R  Q   : G  V  H  I  L  E  W  Q  Q  I  G  T  E  A  F  V  W  S  H  K  T  W  R  P  E  K  I  S  L  W  I  F  *  Y  N  S  G  :  Q  Q  E  R  N  K  K  L  C  R  N  Y  C  V  V  G  C  R  *  S  I  R  D  F  V  C  D  R  C  L  S  R  S  H  S  C  K  G  S  R :   F  G  S  D  N  L  Y  Q  T  R  K  R  T  S  S  R  *  S  R  V  Q  D  S  Q  I  I  F  G  D  L  K  M  G  C  V  M  Y  C  V  T  L  T  *  *  K  *  V  G  S  *  F  I  V  E  K  V  E  P  N  E  S  H  T  A  A  L  I  F  M  I  V  L  V  F  F  F  L  L  Y  *  D  V  I  V  F  F  I  F  V  R  T  I  V  G  D  *  C  F  H  C  S  I  F  K   : D  Q  M  E  T  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0046G04.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67740" stop="67694"/>
                    <exon start="67486" stop="67397"/>
                    <exon start="67147" stop="67006"/>
                    <exon start="66894" stop="66739"/>
                    <exon start="65565" stop="65416"/>
                    <exon start="65300" stop="65199"/>
                    <exon start="64945" stop="64836"/>
                    <exon start="64752" stop="64634"/>
                    <exon start="64232" stop="64141"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1005</number_coding_nucleotides>
                  <number_encoded_amino_acids>335</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RTLHMRENSQNLLLKLSKLTRKRQLCWFATMVYMYGEILGSALKHRSECYHYLFDAAIKLHQLGIDWTTPAHGPIQNAKISALAPNGSIKPSRRCIVLDIEGTTTPISFVTEVLFPYARNNVGRHLDATYDSAETQQDIKLLRAQVQQDLENGVAGAVCIPADDAGKMEVIAALVANVEAMIKADRKITALKELQGHIWQTGFQNNELEGLVFDDVPSALEKWTALGVKVYIYSSGSRLAQRLLFGHTKHGDLRKFLYGFFDTTVGNKRETKSYAEITASLGVDNPSEILFVTDVYQEATAAKAAGLEVIISIRPGNGPLPDSHEFRTVKSFSEI*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0046G04.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69479" stop="69354"/>
                    <exon start="69267" stop="69133"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>258</number_coding_nucleotides>
                  <number_encoded_amino_acids>86</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLSFAVISTIRDGFPAPAAASPLKYMMNPFLNPNNLSLCLLLGCKRKGWWMRICILCHQMGLFYLHRWLNLPLINLLSVLIVRLFL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="72137" PGL_stop="71306"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="72137" e_stop="71306"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.950"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.950">
            <gDNA_exon_boundary e_start="72137" e_stop="71306" e_length="832"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72137" stop="71351"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E547752" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72136" stop="71471"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E362654" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72133" stop="71770"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E364641" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72117" stop="71532"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E360078" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72035" stop="71306"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E547751" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71919" stop="71414"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E359551" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTCATTCTAAAGGAAGGGCAAAAACAACAATAGAAAATCTCACAAAAATATAAAATTAAACAAACAAACAACAGAAGTCGCATTACTTTCATCAATTTGTCAAGATGGCCAGTCGACCAATCTTCGTTTTCATGCTCCTTGCCACCTTGGCATTCGCCATGGTGGCAGAGTCTTCGTTCTCCTCCTCCTCTTCCTTCTTCAACGACCCTGTAGTCAATTCACTCGGCCACAATACTGGTGGTGGCCTTGATGAATGGATGACTACAGGTCGTATCGGGGACACATTGTTTGCTGATGAAGAAATGATGATGCCGACAGAGTCGGCCCGTAGGGCCCTCAATAATCAGGACCACATCAGTTACAGGGCGATGTCGAAGAACGCCATCCCCTGTGACCGACATGGCGCGTCTTACTACCAATGCACCCGCATGCAGAAGATTCGGCCTTATAGACGTGGCTGCAGCAAAATCACCAGATGCCAACGTCGTTAAAAATATTACGTTTTATTCCGATTACATGGTACATTATGAATGTACCATGCAACCACAGAATAAAAACATTTTTTGCGATCATCGCAAAAATATAAAATTAAACTAATTAATACTCGGTAAACATTTCATCTTTGCGACTATATATATACACACATTAATATAAACATGGATTGGAGATAAATTTGCTAATTAAGAAGCTTTTTGTTTGTCCATTCCATATAATTATTCTAACTTCATTTCATAATATTTACATTGTGTACTTTTGTGCCATCATTTGAAGATGATTCATTGATGGTGAAGACTTTGTAAATTGGTGAAATTATATATTTACAGATTCTCC</gDNA_template>
            <first_frame> F  H  S  K  G  R  A  K  T  T  I  E  N  L  T  K  I  *  N  *  T  N  K  Q  Q  K  S  H  Y  F  H  Q  F  V  K  M  A  S  R  P  I  F  V  F  M  L  L  A  T  L  A  F  A  M  V  A  E  S  S  F  S  S  S  S  S  F  F  N  D  P  V  V  N  S  L  G  H  N  T  G  G  G  L  D  E  W  M  T  T  G  R  I  G  D  T  L  F  A  D  E  E  M  M  M  P  T  E  S  A  R  R  A  L  N  N  Q  D  H  I  S  Y  R  A  M  S  K  N  A  I  P  C  D  R  H  G  A  S  Y  Y  Q  C  T  R  M  Q  K  I  R  P  Y  R  R  G  C  S  K  I  T  R  C  Q  R  R  *  K  Y  Y  V  L  F  R  L  H  G  T  L  *  M  Y  H  A  T  T  E  *  K  H  F  L  R  S  S  Q  K  Y  K  I  K  L  I  N  T  R  *  T  F  H  L  C  D  Y  I  Y  T  H  I  N  I  N  M  D  W  R  *  I  C  *  L  R  S  F  L  F  V  H  S  I  *  L  F  *  L  H  F  I  I  F  T  L  C  T  F  V  P  S  F  E  D  D  S  L  M  V  K  T  L  *  I  G  E  I  I  Y  L  Q  I  L  </first_frame>
            <second_frame>  F  I  L  K  E  G  Q  K  Q  Q  *  K  I  S  Q  K  Y  K  I  K  Q  T  N  N  R  S  R  I  T  F  I  N  L  S  R  W  P  V  D  Q  S  S  F  S  C  S  L  P  P  W  H  S  P  W  W  Q  S  L  R  S  P  P  P  L  P  S  S  T  T  L  *  S  I  H  S  A  T  I  L  V  V  A  L  M  N  G  *  L  Q  V  V  S  G  T  H  C  L  L  M  K  K  *  *  C  R  Q  S  R  P  V  G  P  S  I  I  R  T  T  S  V  T  G  R  C  R  R  T  P  S  P  V  T  D  M  A  R  L  T  T  N  A  P  A  C  R  R  F  G  L  I  D  V  A  A  A  K  S  P  D  A  N  V  V  K  N  I  T  F  Y  S  D  Y  M  V  H  Y  E  C  T  M  Q  P  Q  N  K  N  I  F  C  D  H  R  K  N  I  K  L  N  *  L  I  L  G  K  H  F  I  F  A  T  I  Y  I  H  T  L  I  *  T  W  I  G  D  K  F  A  N  *  E  A  F  C  L  S  I  P  Y  N  Y  S  N  F  I  S  *  Y  L  H  C  V  L  L  C  H  H  L  K  M  I  H  *  W  *  R  L  C  K  L  V  K  L  Y  I  Y  R  F  S </second_frame>
            <third_frame>   S  F  *  R  K  G  K  N  N  N  R  K  S  H  K  N  I  K  L  N  K  Q  T  T  E  V  A  L  L  S  S  I  C  Q  D  G  Q  S  T  N  L  R  F  H  A  P  C  H  L  G  I  R  H  G  G  R  V  F  V  L  L  L  L  F  L  L  Q  R  P  C  S  Q  F  T  R  P  Q  Y  W  W  W  P  *  *  M  D  D  Y  R  S  Y  R  G  H  I  V  C  *  *  R  N  D  D  A  D  R  V  G  P  *  G  P  Q  *  S  G  P  H  Q  L  Q  G  D  V  E  E  R  H  P  L  *  P  T  W  R  V  L  L  P  M  H  P  H  A  E  D  S  A  L  *  T  W  L  Q  Q  N  H  Q  M  P  T  S  L  K  I  L  R  F  I  P  I  T  W  Y  I  M  N  V  P  C  N  H  R  I  K  T  F  F  A  I  I  A  K  I  *  N  *  T  N  *  Y  S  V  N  I  S  S  L  R  L  Y  I  Y  T  H  *  Y  K  H  G  L  E  I  N  L  L  I  K  K  L  F  V  C  P  F  H  I  I  I  L  T  S  F  H  N  I  Y  I  V  Y  F  C  A  I  I  *  R  *  F  I  D  G  E  D  F  V  N  W  *  N  Y  I  F  T  D  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0046G04.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="72077" stop="71646"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>429</number_coding_nucleotides>
                  <number_encoded_amino_acids>143</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TNKQQKSHYFHQFVKMASRPIFVFMLLATLAFAMVAESSFSSSSSFFNDPVVNSLGHNTGGGLDEWMTTGRIGDTLFADEEMMMPTESARRALNNQDHISYRAMSKNAIPCDRHGASYYQCTRMQKIRPYRRGCSKITRCQRR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="81793" PGL_stop="78470"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="81793" e_stop="81565"/>
            <exon e_start="81268" e_stop="81047"/>
            <exon e_start="80035" e_stop="79923"/>
            <exon e_start="79452" e_stop="78952"/>
            <exon e_start="78754" e_stop="78738"/>
            <exon e_start="78483" e_stop="78470"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.927" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.857" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.952"/>
          <exon-intron don_prob="0.900" acc_prob="0.920" e_score="0.647"/>
          <exon-only e_score="0.643"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="81793" e_stop="81565" e_length="229"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.927">
            <gDNA_intron_boundary i_start="81564" i_stop="81269" i_length="296"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="81268" e_stop="81047" e_length="222"/>
          </exon>
          <intron i_serial="2" don_prob="0.993" acc_prob="1.000">
            <gDNA_intron_boundary i_start="81046" i_stop="80036" i_length="1011"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="80035" e_stop="79923" e_length="113"/>
          </exon>
          <intron i_serial="3" don_prob="0.857" acc_prob="0.996">
            <gDNA_intron_boundary i_start="79922" i_stop="79453" i_length="470"/>
          </intron>
          <exon e_serial="4" e_score="0.952">
            <gDNA_exon_boundary e_start="79452" e_stop="78952" e_length="501"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="78951" i_stop="78755" i_length="197"/>
          </intron>
          <exon e_serial="5" e_score="0.647">
            <gDNA_exon_boundary e_start="78754" e_stop="78738" e_length="17"/>
          </exon>
          <intron i_serial="5" don_prob="0.900" acc_prob="0.920">
            <gDNA_intron_boundary i_start="78737" i_stop="78484" i_length="254"/>
          </intron>
          <exon e_serial="6" e_score="0.643">
            <gDNA_exon_boundary e_start="78483" e_stop="78470" e_length="14"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81793" stop="81565"/>
              <exon start="81268" stop="81047"/>
              <exon start="80035" stop="79923"/>
              <exon start="79452" stop="79367"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274368" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81785" stop="81565"/>
              <exon start="81268" stop="81047"/>
              <exon start="80035" stop="79923"/>
              <exon start="79452" stop="78990"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E705194" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81772" stop="81565"/>
              <exon start="81268" stop="81047"/>
              <exon start="80035" stop="79923"/>
              <exon start="79452" stop="79355"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E560470" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81769" stop="81565"/>
              <exon start="81268" stop="81047"/>
              <exon start="80035" stop="79929"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258237" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81764" stop="81565"/>
              <exon start="81268" stop="81047"/>
              <exon start="80035" stop="79923"/>
              <exon start="79452" stop="79168"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E727528" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81750" stop="81565"/>
              <exon start="81268" stop="81047"/>
              <exon start="80035" stop="79923"/>
              <exon start="79452" stop="79312"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E450385" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81750" stop="81565"/>
              <exon start="81268" stop="81047"/>
              <exon start="80035" stop="79923"/>
              <exon start="79452" stop="79415"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E423404" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81737" stop="81565"/>
              <exon start="81268" stop="81047"/>
              <exon start="80035" stop="79923"/>
              <exon start="79452" stop="79195"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E455319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81737" stop="81565"/>
              <exon start="81268" stop="81047"/>
              <exon start="80035" stop="79923"/>
              <exon start="79452" stop="79364"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448953" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81726" stop="81565"/>
              <exon start="81268" stop="81047"/>
              <exon start="80035" stop="79923"/>
              <exon start="79452" stop="79058"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E700551" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81717" stop="81565"/>
              <exon start="81268" stop="81047"/>
              <exon start="80035" stop="79923"/>
              <exon start="79452" stop="79232"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375215" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81717" stop="81565"/>
              <exon start="81268" stop="81047"/>
              <exon start="80035" stop="79923"/>
              <exon start="79452" stop="79254"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375433" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81717" stop="81565"/>
              <exon start="81268" stop="81047"/>
              <exon start="80035" stop="79923"/>
              <exon start="79452" stop="79337"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253428" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81700" stop="81565"/>
              <exon start="81268" stop="81047"/>
              <exon start="80035" stop="80012"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243289" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81075" stop="81047"/>
              <exon start="80035" stop="79923"/>
              <exon start="79452" stop="78952"/>
              <exon start="78754" stop="78738"/>
              <exon start="78483" stop="78470"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375432" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79284" stop="78952"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E597196" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79284" stop="79003"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E597289" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79237" stop="78952"/>
              <exon start="78754" stop="78738"/>
              <exon start="78483" stop="78470"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375214" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79191" stop="78981"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586795" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTAGGTAGCTTTTTTAGTGATAATCTGAATAAATTTTTTAGGCATGGCCGATATAACAAGGATCGGAGTTGTTGGCGCCGGCCAAATGGGTGCCGGAATCGCCCAACTCGCCGCCGTCAACGGCGTCGACGTTTGGCTTTACGATTTGGATTCTGAAGCTCTTACTAAAGCTCAAAAATCTATTTCCAATAATATTCAACGCCTCCTCACCAAAGGACAAATCTCTCAG : GCAACGAGTGTTGATGCTGTGAAGCGTCTTCGTTGTTCTTCGCGCTTGGATGATTTACAGTCAGTTGATATTGTTGTTGAGGCTATTGTGGAGTCTGAACAAGTGAAGAAATCTTTATTTGCTAACTTGGATAAGATTGTAAAGAGTTCTGCTATTTTGGCTTCTAATACAAGCTCTATTTCCATTACTCGTCTAGCATCTGCAACGAGCCGACCCTCTCAG : GTGATCGGCATGCACTTTATGAATCCTCCGCCGATTATGAAGCTGGTTGAAATTATTCGGGGTGCAGATACATCAGAAGACACATATTGTGCCACTAAATGCCTGGCAGAGAG : GTTTGGTAAGACAGTTATCTGCTCTCAGGATTACTCTGGTTTCATAGTAAACCGAATTTTGATGCCAATGATAAACGAAGCCTTTCATACACTGTACACCGGAGTTGCAACAAAAGAAGATATCGATACAGGAATGAAACTAGGAACCAACCATCCTATGGGTCCTCTTGAACTTGCAGATTTTATCGGACTGGATGTTTGTTTGTCAATCATGAAAGTTCTTCAAGCCGGTCTAGGGGACGATAAATATGCCCCATGCCCTCTCCTTGTGCAGTATGTTGATGCTGGTAGACTTGGTAAAAAGCGAGGCGTTGGTGTATATGATTACCGTAATGCTGCTAAGAAAACAGGAGGATCGCCTCGACTCTGAACTCCTTGCCCTTGGATTTGATGAAACAAATTACAACTTGTTGAAATACTCTCCTTGTACAATTCAATAAAAGAGAGAAAAATTCACGGTGTAATTGTTCTCATCTTATTGCATAGCTTTTGTTGTGTCAA : AAATTAAATTAAATTAA : AAGAAAATTTCAAA</gDNA_template>
            <first_frame> L  G  S  F  F  S  D  N  L  N  K  F  F  R  H  G  R  Y  N  K  D  R  S  C  W  R  R  P  N  G  C  R  N  R  P  T  R  R  R  Q  R  R  R  R  L  A  L  R  F  G  F  *  S  S  Y  *  S  S  K  I  Y  F  Q  *  Y  S  T  P  P  H  Q  R  T  N  L  S   : G  N  E  C  *  C  C  E  A  S  S  L  F  F  A  L  G  *  F  T  V  S  *  Y  C  C  *  G  Y  C  G  V  *  T  S  E  E  I  F  I  C  *  L  G  *  D  C  K  E  F  C  Y  F  G  F  *  Y  K  L  Y  F  H  Y  S  S  S  I  C  N  E  P  T  L  S   : G  D  R  H  A  L  Y  E  S  S  A  D  Y  E  A  G  *  N  Y  S  G  C  R  Y  I  R  R  H  I  L  C  H  *  M  P  G  R  E  :  V  W  *  D  S  Y  L  L  S  G  L  L  W  F  H  S  K  P  N  F  D  A  N  D  K  R  S  L  S  Y  T  V  H  R  S  C  N  K  R  R  Y  R  Y  R  N  E  T  R  N  Q  P  S  Y  G  S  S  *  T  C  R  F  Y  R  T  G  C  L  F  V  N  H  E  S  S  S  S  R  S  R  G  R  *  I  C  P  M  P  S  P  C  A  V  C  *  C  W  *  T  W  *  K  A  R  R  W  C  I  *  L  P  *  C  C  *  E  N  R  R  I  A  S  T  L  N  S  L  P  L  D  L  M  K  Q  I  T  T  C  *  N  T  L  L  V  Q  F  N  K  R  E  K  N  S  R  C  N  C  S  H  L  I  A  *  L  L  L  C  Q  :  K  L  N  *  I  K :   R  K  F  Q  </first_frame>
            <second_frame>  *  V  A  F  L  V  I  I  *  I  N  F  L  G  M  A  D  I  T  R  I  G  V  V  G  A  G  Q  M  G  A  G  I  A  Q  L  A  A  V  N  G  V  D  V  W  L  Y  D  L  D  S  E  A  L  T  K  A  Q  K  S  I  S  N  N  I  Q  R  L  L  T  K  G  Q  I  S  Q  :  A  T  S  V  D  A  V  K  R  L  R  C  S  S  R  L  D  D  L  Q  S  V  D  I  V  V  E  A  I  V  E  S  E  Q  V  K  K  S  L  F  A  N  L  D  K  I  V  K  S  S  A  I  L  A  S  N  T  S  S  I  S  I  T  R  L  A  S  A  T  S  R  P  S  Q  :  V  I  G  M  H  F  M  N  P  P  P  I  M  K  L  V  E  I  I  R  G  A  D  T  S  E  D  T  Y  C  A  T  K  C  L  A  E  R :   F  G  K  T  V  I  C  S  Q  D  Y  S  G  F  I  V  N  R  I  L  M  P  M  I  N  E  A  F  H  T  L  Y  T  G  V  A  T  K  E  D  I  D  T  G  M  K  L  G  T  N  H  P  M  G  P  L  E  L  A  D  F  I  G  L  D  V  C  L  S  I  M  K  V  L  Q  A  G  L  G  D  D  K  Y  A  P  C  P  L  L  V  Q  Y  V  D  A  G  R  L  G  K  K  R  G  V  G  V  Y  D  Y  R  N  A  A  K  K  T  G  G  S  P  R  L  *  T  P  C  P  W  I  *  *  N  K  L  Q  L  V  E  I  L  S  L  Y  N  S  I  K  E  R  K  I  H  G  V  I  V  L  I  L  L  H  S  F  C  C  V  K :   N  *  I  K  L   : K  E  N  F  K </second_frame>
            <third_frame>   R  *  L  F  *  *  *  S  E  *  I  F  *  A  W  P  I  *  Q  G  S  E  L  L  A  P  A  K  W  V  P  E  S  P  N  S  P  P  S  T  A  S  T  F  G  F  T  I  W  I  L  K  L  L  L  K  L  K  N  L  F  P  I  I  F  N  A  S  S  P  K  D  K  S  L  R :   Q  R  V  L  M  L  *  S  V  F  V  V  L  R  A  W  M  I  Y  S  Q  L  I  L  L  L  R  L  L  W  S  L  N  K  *  R  N  L  Y  L  L  T  W  I  R  L  *  R  V  L  L  F  W  L  L  I  Q  A  L  F  P  L  L  V  *  H  L  Q  R  A  D  P  L  R :   *  S  A  C  T  L  *  I  L  R  R  L  *  S  W  L  K  L  F  G  V  Q  I  H  Q  K  T  H  I  V  P  L  N  A  W  Q  R   : G  L  V  R  Q  L  S  A  L  R  I  T  L  V  S  *  *  T  E  F  *  C  Q  *  *  T  K  P  F  I  H  C  T  P  E  L  Q  Q  K  K  I  S  I  Q  E  *  N  *  E  P  T  I  L  W  V  L  L  N  L  Q  I  L  S  D  W  M  F  V  C  Q  S  *  K  F  F  K  P  V  *  G  T  I  N  M  P  H  A  L  S  L  C  S  M  L  M  L  V  D  L  V  K  S  E  A  L  V  Y  M  I  T  V  M  L  L  R  K  Q  E  D  R  L  D  S  E  L  L  A  L  G  F  D  E  T  N  Y  N  L  L  K  Y  S  P  C  T  I  Q  *  K  R  E  K  F  T  V  *  L  F  S  S  Y  C  I  A  F  V  V  S   : K  I  K  L  N  *  :  K  K  I  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0046G04.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="81765" stop="81565"/>
                    <exon start="81268" stop="81047"/>
                    <exon start="80035" stop="79923"/>
                    <exon start="79452" stop="79083"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>903</number_coding_nucleotides>
                  <number_encoded_amino_acids>301</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>INFLGMADITRIGVVGAGQMGAGIAQLAAVNGVDVWLYDLDSEALTKAQKSISNNIQRLLTKGQISQATSVDAVKRLRCSSRLDDLQSVDIVVEAIVESEQVKKSLFANLDKIVKSSAILASNTSSISITRLASATSRPSQVIGMHFMNPPPIMKLVEIIRGADTSEDTYCATKCLAERFGKTVICSQDYSGFIVNRILMPMINEAFHTLYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDVCLSIMKVLQAGLGDDKYAPCPLLVQYVDAGRLGKKRGVGVYDYRNAAKKTGGSPRL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="91901" PGL_stop="92587"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="91901" e_stop="92587"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="91901" e_stop="92587" e_length="687"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91901" stop="92587"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E213478" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAATTCCTGAGAACTATGCAAACCTTTCATCGCTTGTGTTCCTCTCGTTGTCCAATAATTCCCTTTCAAATTTGTCTGGAGCTTTATCTGTTCTGCAGCACTGCAGAAATCTTTCAACTCTTATTCTCACCAGGAACTTCCGTGGTGAAGAGATTCCGAAAAATGTGAGTGGATTTGAGAACCTGATGATATTTGCATTGGGGAACTGTGGTCTGGATGGGCGAATTCCGATATGGTTATACAATTGCAGTAAATTGCAAGTGCTTGACCTGTCATGGAATCATTTGGATGGCGAAATTCCTACTTGGATTGGTGAAATGGAAAAATTGTTCTACTTGGATTTCTCGAATAATTCACTCACAGGTGAAATCCCAAAAAATTTAACTGATCTTAAGAGTCTCATTTCCCCACACAACTATGCATCTAGTCTGAATTCTCCCACTGGTATACCGTTGTTTGTCAAGAGGAATCAAAGCGGTAGTGGTTTGCAGTACAATCAGGCTTCAAGCTTCCCTCCGTCTATCTTATTGAGTAATAACAGACTAAACGGGACAATCTGGCCCGAAATTGGTCGGCTGAAACAACTTCATGTCTTGGATCTCAGTAAGAACAACATTACGGGGACTATTCCTAGCTCGATTTCAAATATGGGGAACCTGGAAGTTTTGGATCTTTCATGTAATGATC</gDNA_template>
            <first_frame> Q  F  L  R  T  M  Q  T  F  H  R  L  C  S  S  R  C  P  I  I  P  F  Q  I  C  L  E  L  Y  L  F  C  S  T  A  E  I  F  Q  L  L  F  S  P  G  T  S  V  V  K  R  F  R  K  M  *  V  D  L  R  T  *  *  Y  L  H  W  G  T  V  V  W  M  G  E  F  R  Y  G  Y  T  I  A  V  N  C  K  C  L  T  C  H  G  I  I  W  M  A  K  F  L  L  G  L  V  K  W  K  N  C  S  T  W  I  S  R  I  I  H  S  Q  V  K  S  Q  K  I  *  L  I  L  R  V  S  F  P  H  T  T  M  H  L  V  *  I  L  P  L  V  Y  R  C  L  S  R  G  I  K  A  V  V  V  C  S  T  I  R  L  Q  A  S  L  R  L  S  Y  *  V  I  T  D  *  T  G  Q  S  G  P  K  L  V  G  *  N  N  F  M  S  W  I  S  V  R  T  T  L  R  G  L  F  L  A  R  F  Q  I  W  G  T  W  K  F  W  I  F  H  V  M  I </first_frame>
            <second_frame>  N  S  *  E  L  C  K  P  F  I  A  C  V  P  L  V  V  Q  *  F  P  F  K  F  V  W  S  F  I  C  S  A  A  L  Q  K  S  F  N  S  Y  S  H  Q  E  L  P  W  *  R  D  S  E  K  C  E  W  I  *  E  P  D  D  I  C  I  G  E  L  W  S  G  W  A  N  S  D  M  V  I  Q  L  Q  *  I  A  S  A  *  P  V  M  E  S  F  G  W  R  N  S  Y  L  D  W  *  N  G  K  I  V  L  L  G  F  L  E  *  F  T  H  R  *  N  P  K  K  F  N  *  S  *  E  S  H  F  P  T  Q  L  C  I  *  S  E  F  S  H  W  Y  T  V  V  C  Q  E  E  S  K  R  *  W  F  A  V  Q  S  G  F  K  L  P  S  V  Y  L  I  E  *  *  Q  T  K  R  D  N  L  A  R  N  W  S  A  E  T  T  S  C  L  G  S  Q  *  E  Q  H  Y  G  D  Y  S  *  L  D  F  K  Y  G  E  P  G  S  F  G  S  F  M  *  *   </second_frame>
            <third_frame>   I  P  E  N  Y  A  N  L  S  S  L  V  F  L  S  L  S  N  N  S  L  S  N  L  S  G  A  L  S  V  L  Q  H  C  R  N  L  S  T  L  I  L  T  R  N  F  R  G  E  E  I  P  K  N  V  S  G  F  E  N  L  M  I  F  A  L  G  N  C  G  L  D  G  R  I  P  I  W  L  Y  N  C  S  K  L  Q  V  L  D  L  S  W  N  H  L  D  G  E  I  P  T  W  I  G  E  M  E  K  L  F  Y  L  D  F  S  N  N  S  L  T  G  E  I  P  K  N  L  T  D  L  K  S  L  I  S  P  H  N  Y  A  S  S  L  N  S  P  T  G  I  P  L  F  V  K  R  N  Q  S  G  S  G  L  Q  Y  N  Q  A  S  S  F  P  P  S  I  L  L  S  N  N  R  L  N  G  T  I  W  P  E  I  G  R  L  K  Q  L  H  V  L  D  L  S  K  N  N  I  T  G  T  I  P  S  S  I  S  N  M  G  N  L  E  V  L  D  L  S  C  N  D  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0046G04.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="91903" stop="92586"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>684</number_coding_nucleotides>
                  <number_encoded_amino_acids>228</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IPENYANLSSLVFLSLSNNSLSNLSGALSVLQHCRNLSTLILTRNFRGEEIPKNVSGFENLMIFALGNCGLDGRIPIWLYNCSKLQVLDLSWNHLDGEIPTWIGEMEKLFYLDFSNNSLTGEIPKNLTDLKSLISPHNYASSLNSPTGIPLFVKRNQSGSGLQYNQASSFPPSILLSNNRLNGTIWPEIGRLKQLHVLDLSKNNITGTIPSSISNMGNLEVLDLSCND</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 316 chains have been computed
$ 
$ memory statistics:
$ 1334528 bytes spliced alignments in total
$ 242 spliced alignments have been stored
$ 5514 bytes was the average size of a spliced alignment
$ 33256 bytes predicted gene locations in total
$ 15 predicted gene locations have been stored
$ 2217 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 343 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-14 20:54:50
-->
