<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-03-02 08:32:26"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C07HBa0078D19-pLPJK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C07HBa0078D19-pLPJK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0078D19-pLPJK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E480556" ref_strand="+" ref_description="SGN-E480556 [cSTD-14-I24]">
      <seq>agagggaatttggatctcctatcagacctattgctcaatctactcttgatcaaacttctcggaaaaagtttatacgccaaattgtccaacttggtgtgcaatcttcagacagaatttttcatctgaagctgtatcaaaccttaattgatttgggcctggaagatgaactgctggaatacggtggccccgatttggtaccttttctgcaaaattctggtcgtgaacctacaaatgaggttcgtgttgtctctgcagtggcatctccaacttcaccattggctcatgctagattacctgcaccatccaaccaagcaaaatattttgagctgttggctcgttattatgttttgaagagacagcacgttcttgcagcccatgttttggtgaggcttgcagaaaggcgctccactaatgcaggggatgctcctactttagaacaaaggcggcaatacttgagtaatgctgttttgcaagcaaagagtgcccatgatagcgatggtatgagtggttcttcccggggtgctcttgacaatggactgcttgatttgctcgaaggaaagcttgctgttcttcagtttcaaattaaaattaaagatgaactggaggctatgtcttccaggttagagtcatctacaagcacatctgaatctggttctggtgaaacatcacccaatatgagtaatattcttcgagaaaagccaaggagttatcgatggaattgaagagcattacacagttgtataatgactatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0078D19-pLPJK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0078D19.1" temp_strand="+" temp_description="C07HBa0078D19.1  AC234404.1 htgs_phase:2 submitted_to_sgn_as:gi|222136704|gb|AC234404.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0078D19, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="6368" stop="9137"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6668" g_stop="6903" g_length="236"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="236" r_length="236" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="6904" i_stop="7079" i_length="176">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.585" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7080" g_stop="7285" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="237" r_stop="442" r_length="206" r_score="0.956"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7286" i_stop="8524" i_length="1239">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="8525" g_stop="8837" g_length="313"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="754" r_length="312" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0078D19.1" gen_strand="+" ref_id="SGN-E480556" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>755</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0078D19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E480556" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6668" e_stop="6903"/>
          <exon e_start="7080" e_stop="7285"/>
          <exon e_start="8525" e_stop="8837"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGGGAATTTGGATCTCCTATCAGACCTATTGCTCAGTCTACTCTTGATCAAACTTCTCGGAAAAAGTTCATTTGCCAGATTGTCCAACTTGGTGTGCAATCTTCAGACAGAATTTTTCATCTGAAGCTGTATCAAACCTTAATCGATTTGGGCCTGGAAGATGAACTACTTGAATATGGTGGCCCTGATTTGGTACCTTTTCTGCAAAATTCTGGTCGTGAACCTACAAATGAGGTTTGTCTATTGTGGTTTCTATTTTTATACTGCTTATGTTTCTTGTGTTTGATACTCGGCGTTGATAGTTATCTAGTTGTTCATCATATTATTAGCATCCAGTTTTCTTGCATAACGTTTTGGTGTTTTTGCGGGACCAATTTCCCGAGCCATCAGTTCTTTCATTTTCTTCGCAGGTTCGTGCTGTCTCTGCAGTGGCATCTCCAACTTCACCATTGGCTCATGCTAGAGTACCTGCACTATCCAACCAAGCCAAATATTTTGAGCTTTTGGCTCGTTATTATGTTTTGAAGAGACAACACGTTCTTGCAGCCCATGTTTTGGTGAGGCTGGCAGAAAGGCGCTCCACTGATGCAGGGGATGCTCCTAGTTTAGAACAAAGGTTCTTATCCCAACTGACCTAATGAATATTTAAGCCTATTTTTCAGGATTGAGCATAATTGGTGTGAATTTTTCTTATCCATTCACAATCTTGCATGAATGTTTCATTTATTCCTTTATGATAGAAATTTGGGGGAGATACACCTTTAAACTAGAGTTGATGAATTTGTATTGCAAACTATGTAGAGTATTTTTTTTCTTTCACTAAATTTACAATAAAGGTAGTTTGACTAAAGCATATTTGTCACAAACCACTAGTTCTTATATGTGAAGCAGTTCTTATCTTATTTAGTACTCCATCTATCCATATTTTTTTTTTTGAAACTGGTTAAGTGCTCCATCTATCCATTAATTATTTGTTGCATTTGACTGGGCAAGGAGTTTGAGATGTTTAAGTTGGTGTTCCAAATTTTGTACTACTGCATACTTATAAGCTGTGTTGTAAGTTCAAGCACTTCAATTCTGCGATCTGAATTCTCAACGTAATATTCACATTCATTTTAACATTTGATGAGGGCCCTAAGAATGTCTTGGTTTATCTGCCATGGCAGTTCCCTGTTGTGGCAAATGCGAAATTTTAGAGGAAAGATAAAACAACTGCTCATTAAATTAATAGCTTTCTCAGAAATGTAGGTGCTGTTACCGCTTTGTGACAAAGTATTTTTGGATTTATTGAGAGTGGAGCGCTACTAATTTTTTCAAACATAGAGATATAGAAAGAGAGAAAGTAGTATCCTTTTCTCTTTGGTCTGGTTCAGAAAGCCCGACTTGCTGTTCCTCTAAGAGGGCTTCTTAATCTGTCATTGTTTAGCTGTTTATGTTACTCAGAACAGATCTCATTTTGTTTTCTTCTGTCCCATTTTGTATCACTCTATTTGGTTGTGCTTTCTTGGTAGTAGTGAAATAAAATATCTAGTTGTTGAAAGTTTGTTTCATAAATAAAATATCACAGTAGAATTTGAATAGAAAGTCTAAATATGTTAGTAAAATGTAATTAGAGCAACATGAATAGTGAGGATTCATATAGCTGACCCCTACGTGCTTGGATTGGAGCATAATTGTTGTGGAAGGCTTGAAAGTTGTATAAAATCACATTGTTAGTGAAATGGTACCTTATTCTTTTGGATGTATTGTAGATAGAAAGAATGTTATCCATGTTTGAATGAAGGAAATACTTTTTTGTGTTTAATAGAAATTTGTTGTGAGACCAGTGTTTGCTGTCTAATTTGGGTAATGGCAGGCGGCAATACTTGAGTAATGCTGTTTTGCAAGCAAAGAGTGCCCATGACACTGATGGTATGAGTGGTTCTGCGCGGGGTGCTCTTGACAATGGGCTGCTTGATTTGCTCGAAGGAAAGCTTGCTGTTCTTCAGTTTCAAATTAAAATTAAAGATGAACTGGAGGCTATGTCTTCCAGGTTAGAGTCATCTACAAGCACATCTGAATCTGGTTCTGGTGAAACATCACCCAATATGAGTAATATTCTTCGAGAAAAAGCGAAGGAGCTATCAATGGAATTGAAGAGCATTACACAGTTGTATAATGACTATGCT</genome_strand>
        <mrna_strand>AGAGGGAATTTGGATCTCCTATCAGACCTATTGCTCAATCTACTCTTGATCAAACTTCTCGGAAAAAGTTTATACGCCAAATTGTCCAACTTGGTGTGCAATCTTCAGACAGAATTTTTCATCTGAAGCTGTATCAAACCTTAATTGATTTGGGCCTGGAAGATGAACTGCTGGAATACGGTGGCCCCGATTTGGTACCTTTTCTGCAAAATTCTGGTCGTGAACCTACAAATGAG................................................................................................................................................................................GTTCGTGTTGTCTCTGCAGTGGCATCTCCAACTTCACCATTGGCTCATGCTAGATTACCTGCACCATCCAACCAAGCAAAATATTTTGAGCTGTTGGCTCGTTATTATGTTTTGAAGAGACAGCACGTTCTTGCAGCCCATGTTTTGGTGAGGCTTGCAGAAAGGCGCTCCACTAATGCAGGGGATGCTCCTACTTTAGAACAAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGCAATACTTGAGTAATGCTGTTTTGCAAGCAAAGAGTGCCCATGATAGCGATGGTATGAGTGGTTCTTCCCGGGGTGCTCTTGACAATGGACTGCTTGATTTGCTCGAAGGAAAGCTTGCTGTTCTTCAGTTTCAAATTAAAATTAAAGATGAACTGGAGGCTATGTCTTCCAGGTTAGAGTCATCTACAAGCACATCTGAATCTGGTTCTGGTGAAACATCACCCAATATGAGTAATATTCTTCGAG-AAAAGCCAAGGAGTTATCGATGGAATTGAAGAGCATTACACAGTTGTATAATGACTATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0078D19-pLPJK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E740063" ref_strand="+" ref_description="SGN-E740063 [LC19DG03]">
      <seq>gtgaacctacaaatgaggttcgtgctgtctctgcagtggcatctccaacttcaccattggctcatgctagagtacctgcactatccaaccaagccaaatattttgagcttttggctcgttattatgttttgaagagacaacacgttcttgcagcccatgttttggtgaggctggcagaaaggcgctccactgatgcaggggatgctcctagtttagaacaaaggcggcaatacttgagtaatgctgttttgcaagcaaagagtgcccatgacactgatggtatgagtggttctgcgcggggtgctcttgacaatgggctgcttgatttgctcgaaggaaagcttgctgttcttcagtttcaaattaaaattaaagatgaactggaggctatgtcttccaggttagagtcatctacaagcacatctgaatctggttctggtgaaacatcacccaatatgagtaatattcttcgagaaaaagcgaaggagctatcaatggaattgaagagcattacacagttgtataatgactatgctgttccttttgagatatgggagatatgcctggagatgttgtacttcgctagctactccggtgatgctgatagcagcatactgcgagagacgtgggctaggctcattgatcaagctcttatgaggggtgggattgctgaagcttgtgctgtactgaagagggttggtacccatgtgtatcccggagatgggaactgttttaccatttgatactctctgtcttcaccttgaaaaggctgcactggaacaagtggtttctggggctgaatctgttggaaatgaaaatattcctagggct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0078D19-pLPJK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0078D19.1" temp_strand="+" temp_description="C07HBa0078D19.1  AC234404.1 htgs_phase:2 submitted_to_sgn_as:gi|222136704|gb|AC234404.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0078D19, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="6587" stop="10821"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6887" g_stop="6903" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="17" r_length="17" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="6904" i_stop="7079" i_length="176">
            <donor d_prob="0.997" d_score="0.00"/>
            <acceptor a_prob="0.585" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7080" g_stop="7285" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="223" r_length="206" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7286" i_stop="8524" i_length="1239">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="8525" g_stop="8858" g_length="334"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="557" r_length="334" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="8859" i_stop="10117" i_length="1259">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.946" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10118" g_stop="10336" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="558" r_stop="777" r_length="220" r_score="0.991"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="10337" i_stop="10467" i_length="131">
            <donor d_prob="0.491" d_score="1.00"/>
            <acceptor a_prob="0.836" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10468" g_stop="10521" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="778" r_stop="831" r_length="54" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0078D19.1" gen_strand="+" ref_id="SGN-E740063" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>830</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0078D19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E740063" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6887" e_stop="6903"/>
          <exon e_start="7080" e_stop="7285"/>
          <exon e_start="8525" e_stop="8858"/>
          <exon e_start="10118" e_stop="10336"/>
          <exon e_start="10468" e_stop="10521"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAACCTACAAATGAGGTTTGTCTATTGTGGTTTCTATTTTTATACTGCTTATGTTTCTTGTGTTTGATACTCGGCGTTGATAGTTATCTAGTTGTTCATCATATTATTAGCATCCAGTTTTCTTGCATAACGTTTTGGTGTTTTTGCGGGACCAATTTCCCGAGCCATCAGTTCTTTCATTTTCTTCGCAGGTTCGTGCTGTCTCTGCAGTGGCATCTCCAACTTCACCATTGGCTCATGCTAGAGTACCTGCACTATCCAACCAAGCCAAATATTTTGAGCTTTTGGCTCGTTATTATGTTTTGAAGAGACAACACGTTCTTGCAGCCCATGTTTTGGTGAGGCTGGCAGAAAGGCGCTCCACTGATGCAGGGGATGCTCCTAGTTTAGAACAAAGGTTCTTATCCCAACTGACCTAATGAATATTTAAGCCTATTTTTCAGGATTGAGCATAATTGGTGTGAATTTTTCTTATCCATTCACAATCTTGCATGAATGTTTCATTTATTCCTTTATGATAGAAATTTGGGGGAGATACACCTTTAAACTAGAGTTGATGAATTTGTATTGCAAACTATGTAGAGTATTTTTTTTCTTTCACTAAATTTACAATAAAGGTAGTTTGACTAAAGCATATTTGTCACAAACCACTAGTTCTTATATGTGAAGCAGTTCTTATCTTATTTAGTACTCCATCTATCCATATTTTTTTTTTTGAAACTGGTTAAGTGCTCCATCTATCCATTAATTATTTGTTGCATTTGACTGGGCAAGGAGTTTGAGATGTTTAAGTTGGTGTTCCAAATTTTGTACTACTGCATACTTATAAGCTGTGTTGTAAGTTCAAGCACTTCAATTCTGCGATCTGAATTCTCAACGTAATATTCACATTCATTTTAACATTTGATGAGGGCCCTAAGAATGTCTTGGTTTATCTGCCATGGCAGTTCCCTGTTGTGGCAAATGCGAAATTTTAGAGGAAAGATAAAACAACTGCTCATTAAATTAATAGCTTTCTCAGAAATGTAGGTGCTGTTACCGCTTTGTGACAAAGTATTTTTGGATTTATTGAGAGTGGAGCGCTACTAATTTTTTCAAACATAGAGATATAGAAAGAGAGAAAGTAGTATCCTTTTCTCTTTGGTCTGGTTCAGAAAGCCCGACTTGCTGTTCCTCTAAGAGGGCTTCTTAATCTGTCATTGTTTAGCTGTTTATGTTACTCAGAACAGATCTCATTTTGTTTTCTTCTGTCCCATTTTGTATCACTCTATTTGGTTGTGCTTTCTTGGTAGTAGTGAAATAAAATATCTAGTTGTTGAAAGTTTGTTTCATAAATAAAATATCACAGTAGAATTTGAATAGAAAGTCTAAATATGTTAGTAAAATGTAATTAGAGCAACATGAATAGTGAGGATTCATATAGCTGACCCCTACGTGCTTGGATTGGAGCATAATTGTTGTGGAAGGCTTGAAAGTTGTATAAAATCACATTGTTAGTGAAATGGTACCTTATTCTTTTGGATGTATTGTAGATAGAAAGAATGTTATCCATGTTTGAATGAAGGAAATACTTTTTTGTGTTTAATAGAAATTTGTTGTGAGACCAGTGTTTGCTGTCTAATTTGGGTAATGGCAGGCGGCAATACTTGAGTAATGCTGTTTTGCAAGCAAAGAGTGCCCATGACACTGATGGTATGAGTGGTTCTGCGCGGGGTGCTCTTGACAATGGGCTGCTTGATTTGCTCGAAGGAAAGCTTGCTGTTCTTCAGTTTCAAATTAAAATTAAAGATGAACTGGAGGCTATGTCTTCCAGGTTAGAGTCATCTACAAGCACATCTGAATCTGGTTCTGGTGAAACATCACCCAATATGAGTAATATTCTTCGAGAAAAAGCGAAGGAGCTATCAATGGAATTGAAGAGCATTACACAGTTGTATAATGACTATGCTGTTCCTTTTGAGATATGGGAGGTATGATACACAATAAACACACATTTGTCACCATGTGCTCTACTTTATTTATTTGTTTTTGCTCTACTTTTTGCATGATCTTTTTTTAAAAAAAATTTAAACCCGTTTGACCATGAAATTTCACTTTTTCCAGAAAATTGTTTCACTTTATTCAACCTACTTCAAAATTTTCAAATAAAGTGAATTTGATTATTTTGGTTTTTTTTCAGATAAGCTGTACTTTTTTTCCCTTCTTTTTATCATGGATGCTCTGGTAGATAACTCTAGATCGTAAAGAGGTCTATTCTTCATGGGAGTATTTTAAAAAGTGATTTTATTCTCGAATTGCATAACAAGTGAGACCATAGATGTGACTTCTGGATTATAAACTAATTAGAGCAATAGAATATGCCTCTGCTGTTATACTTAACTTTTCAATACCAAATTCCCTGTTTATAAGAGTCACTGTGCAACTATATGGGCTTCTTCGATTTAAAAACAAAATAAAAAAGAAGAGCAACTGGATGGGGTCTCTGTGCAGCAGTGCCAGAGGGCAGCTCAAAGCTTATATCTGAACATCACAGTTTGTAAATGGGTGACATTTCAGCTTGTGAATGCTTCCCAAAGTTTTTCAGCAATTTCCACTTATCCCCTCCCCTTCACTCTTTTTCTTGCCAAGGATTTGTCAATGCCATTCTTAATTTTACATCTTATCTATAAAGAAATGGATATTGCGCCTAACATAACCCCAAAGGCTAGCTCATTGGATGAGTATTTGCTGACGACTACATAAGGAGGCAAACAACTCTTTTCCACATTGATGTGGGGCTCTAACACCGCCTAGTATGCTTAGCACTAGACATCTGGAGCGTGGACAATATAATAATAGGACCCAACATTGGGTAACCCAGGAATTAGGATGGGTCTGTTCTGATGCCAAGGAAAAGAAGTGGATCTTGAGCCTAACTCAGCACTAAGGAGGCAAACCCCCTTATCCTACACTAATGTGTGATTTTAACACCATCTTTCATACACCATTGGCAGTGATCGGCTAGGGCATATTGCTTAATGTGCAAAAATATCTCTATAGTTTGAATATAGTTGACTAGCCTCCCAAAAGAATCGAATAGAAAGGTAAAATCACCAGCTAATGGAAATTGGTAATTTTGAATTACTTTCATCTATCGAAGATTAAGAGATTGATCAATTTTGTCATCATTTTAAGCTCTCCAATTTCAGGCAACTGAACCAAGTATCTTTTTCATGTTTCTGACTTACAGATATGCCTGGAGATGTTGTACTTCGCTAGCTACTCCGGTGATGCTGATAGCAGCATACTGCGAGAGACGTGGGCTAGGCTCATTGATCAAGCTCTTATGAGGGGTGGGATTGCTGAAGCTTGTGCTGTACTGAAGAGGGTTGGTACCCATGTGTATCCCGGAGAT-GGAACTGTTTTACCATTTGATACTCTCTGTCTTCACCTTGAAAAGGCTGCACTGGTATGGGCTATTACCCCTTTCGAGCTGCCCCTGCCCATTTTCATTCTGCTAGTTCCCTTGCATGTGCTTTCAACTAATTCAATGCTTCATTTTGAAATTTAAACATGATTGCATCCTTTAATACTGTGAAGGAACAAGTGGTTTCTGGTGCTGAATCTGTTGGAGATGAAGATATTCCTAGGGCT</genome_strand>
        <mrna_strand>GTGAACCTACAAATGAG................................................................................................................................................................................GTTCGTGCTGTCTCTGCAGTGGCATCTCCAACTTCACCATTGGCTCATGCTAGAGTACCTGCACTATCCAACCAAGCCAAATATTTTGAGCTTTTGGCTCGTTATTATGTTTTGAAGAGACAACACGTTCTTGCAGCCCATGTTTTGGTGAGGCTGGCAGAAAGGCGCTCCACTGATGCAGGGGATGCTCCTAGTTTAGAACAAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGCAATACTTGAGTAATGCTGTTTTGCAAGCAAAGAGTGCCCATGACACTGATGGTATGAGTGGTTCTGCGCGGGGTGCTCTTGACAATGGGCTGCTTGATTTGCTCGAAGGAAAGCTTGCTGTTCTTCAGTTTCAAATTAAAATTAAAGATGAACTGGAGGCTATGTCTTCCAGGTTAGAGTCATCTACAAGCACATCTGAATCTGGTTCTGGTGAAACATCACCCAATATGAGTAATATTCTTCGAGAAAAAGCGAAGGAGCTATCAATGGAATTGAAGAGCATTACACAGTTGTATAATGACTATGCTGTTCCTTTTGAGATATGGGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGCCTGGAGATGTTGTACTTCGCTAGCTACTCCGGTGATGCTGATAGCAGCATACTGCGAGAGACGTGGGCTAGGCTCATTGATCAAGCTCTTATGAGGGGTGGGATTGCTGAAGCTTGTGCTGTACTGAAGAGGGTTGGTACCCATGTGTATCCCGGAGATGGGAACTGTTTTACCATTTGATACTCTCTGTCTTCACCTTGAAAAGGCTGCACTG...................................................................................................................................GAACAAGTGGTTTCTGGGGCTGAATCTGTTGGAAATGAAAATATTCCTAGGGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0078D19-pLPJK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E591051" ref_strand="+" ref_description="SGN-E591051 [44755]">
      <seq>tgctccactaatgcaggggatgctcctactttaaacaaaggcggcaatacttgagtaatgctgttttgcaagcaaagagtgcccatgatagcgatggtatgagtggttcttcccggggtgctcttgacaatggactgcttgatttgctcgaaggaaagcttgctgttcttcagtttcaaattaaaattaaagatgaactggaggctatgtcttccaggttagagtcatctacaagcacatctgaatctggttctggtgaaacatcacccaatatgagtaatattcttcgagaaaaagccaaggagttatcgatggaattgaagagcattacacagttgtataatgactatgctgttccttttgagatatgggagatatgtctggagatgttgtactttgctagctactctggtgatgctgatagcagcatactgcgagagacatgggctaggctcattgatcaagctcttatgaggggtgggattgctgaagcttgtgctgtactgaagagggttggtacccatatgtatcccggagatggagctgttttaccatttgatactctctgtcttcaccttgagaaggctgcactggagcaagtggtttctggtgctgaatctgttggagatgaagatattcctagggctcttttaactgcttgcaagggtgcagtagagcctgtattaaatacttatgaccagctgttatccag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0078D19-pLPJK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0078D19.1" temp_strand="+" temp_description="C07HBa0078D19.1  AC234404.1 htgs_phase:2 submitted_to_sgn_as:gi|222136704|gb|AC234404.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0078D19, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="6946" stop="10886"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7245" g_stop="7285" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="40" r_length="40" r_score="0.902"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7286" i_stop="8524" i_length="1239">
            <donor d_prob="0.997" d_score="0.90"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="8525" g_stop="8858" g_length="334"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="374" r_length="334" r_score="0.973"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="8859" i_stop="10117" i_length="1259">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.946" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10118" g_stop="10336" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="593" r_length="219" r_score="0.968"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10337" i_stop="10467" i_length="131">
            <donor d_prob="0.491" d_score="0.98"/>
            <acceptor a_prob="0.836" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10468" g_stop="10586" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="594" r_stop="712" r_length="119" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0078D19.1" gen_strand="+" ref_id="SGN-E591051" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0078D19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E591051" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7245" e_stop="7285"/>
          <exon e_start="8525" e_stop="8858"/>
          <exon e_start="10118" e_stop="10336"/>
          <exon e_start="10468" e_stop="10586"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCTCCACTGATGCAGGGGATGCTCCTAGTTTAGAACAAAGGTTCTTATCCCAACTGACCTAATGAATATTTAAGCCTATTTTTCAGGATTGAGCATAATTGGTGTGAATTTTTCTTATCCATTCACAATCTTGCATGAATGTTTCATTTATTCCTTTATGATAGAAATTTGGGGGAGATACACCTTTAAACTAGAGTTGATGAATTTGTATTGCAAACTATGTAGAGTATTTTTTTTCTTTCACTAAATTTACAATAAAGGTAGTTTGACTAAAGCATATTTGTCACAAACCACTAGTTCTTATATGTGAAGCAGTTCTTATCTTATTTAGTACTCCATCTATCCATATTTTTTTTTTTGAAACTGGTTAAGTGCTCCATCTATCCATTAATTATTTGTTGCATTTGACTGGGCAAGGAGTTTGAGATGTTTAAGTTGGTGTTCCAAATTTTGTACTACTGCATACTTATAAGCTGTGTTGTAAGTTCAAGCACTTCAATTCTGCGATCTGAATTCTCAACGTAATATTCACATTCATTTTAACATTTGATGAGGGCCCTAAGAATGTCTTGGTTTATCTGCCATGGCAGTTCCCTGTTGTGGCAAATGCGAAATTTTAGAGGAAAGATAAAACAACTGCTCATTAAATTAATAGCTTTCTCAGAAATGTAGGTGCTGTTACCGCTTTGTGACAAAGTATTTTTGGATTTATTGAGAGTGGAGCGCTACTAATTTTTTCAAACATAGAGATATAGAAAGAGAGAAAGTAGTATCCTTTTCTCTTTGGTCTGGTTCAGAAAGCCCGACTTGCTGTTCCTCTAAGAGGGCTTCTTAATCTGTCATTGTTTAGCTGTTTATGTTACTCAGAACAGATCTCATTTTGTTTTCTTCTGTCCCATTTTGTATCACTCTATTTGGTTGTGCTTTCTTGGTAGTAGTGAAATAAAATATCTAGTTGTTGAAAGTTTGTTTCATAAATAAAATATCACAGTAGAATTTGAATAGAAAGTCTAAATATGTTAGTAAAATGTAATTAGAGCAACATGAATAGTGAGGATTCATATAGCTGACCCCTACGTGCTTGGATTGGAGCATAATTGTTGTGGAAGGCTTGAAAGTTGTATAAAATCACATTGTTAGTGAAATGGTACCTTATTCTTTTGGATGTATTGTAGATAGAAAGAATGTTATCCATGTTTGAATGAAGGAAATACTTTTTTGTGTTTAATAGAAATTTGTTGTGAGACCAGTGTTTGCTGTCTAATTTGGGTAATGGCAGGCGGCAATACTTGAGTAATGCTGTTTTGCAAGCAAAGAGTGCCCATGACACTGATGGTATGAGTGGTTCTGCGCGGGGTGCTCTTGACAATGGGCTGCTTGATTTGCTCGAAGGAAAGCTTGCTGTTCTTCAGTTTCAAATTAAAATTAAAGATGAACTGGAGGCTATGTCTTCCAGGTTAGAGTCATCTACAAGCACATCTGAATCTGGTTCTGGTGAAACATCACCCAATATGAGTAATATTCTTCGAGAAAAAGCGAAGGAGCTATCAATGGAATTGAAGAGCATTACACAGTTGTATAATGACTATGCTGTTCCTTTTGAGATATGGGAGGTATGATACACAATAAACACACATTTGTCACCATGTGCTCTACTTTATTTATTTGTTTTTGCTCTACTTTTTGCATGATCTTTTTTTAAAAAAAATTTAAACCCGTTTGACCATGAAATTTCACTTTTTCCAGAAAATTGTTTCACTTTATTCAACCTACTTCAAAATTTTCAAATAAAGTGAATTTGATTATTTTGGTTTTTTTTCAGATAAGCTGTACTTTTTTTCCCTTCTTTTTATCATGGATGCTCTGGTAGATAACTCTAGATCGTAAAGAGGTCTATTCTTCATGGGAGTATTTTAAAAAGTGATTTTATTCTCGAATTGCATAACAAGTGAGACCATAGATGTGACTTCTGGATTATAAACTAATTAGAGCAATAGAATATGCCTCTGCTGTTATACTTAACTTTTCAATACCAAATTCCCTGTTTATAAGAGTCACTGTGCAACTATATGGGCTTCTTCGATTTAAAAACAAAATAAAAAAGAAGAGCAACTGGATGGGGTCTCTGTGCAGCAGTGCCAGAGGGCAGCTCAAAGCTTATATCTGAACATCACAGTTTGTAAATGGGTGACATTTCAGCTTGTGAATGCTTCCCAAAGTTTTTCAGCAATTTCCACTTATCCCCTCCCCTTCACTCTTTTTCTTGCCAAGGATTTGTCAATGCCATTCTTAATTTTACATCTTATCTATAAAGAAATGGATATTGCGCCTAACATAACCCCAAAGGCTAGCTCATTGGATGAGTATTTGCTGACGACTACATAAGGAGGCAAACAACTCTTTTCCACATTGATGTGGGGCTCTAACACCGCCTAGTATGCTTAGCACTAGACATCTGGAGCGTGGACAATATAATAATAGGACCCAACATTGGGTAACCCAGGAATTAGGATGGGTCTGTTCTGATGCCAAGGAAAAGAAGTGGATCTTGAGCCTAACTCAGCACTAAGGAGGCAAACCCCCTTATCCTACACTAATGTGTGATTTTAACACCATCTTTCATACACCATTGGCAGTGATCGGCTAGGGCATATTGCTTAATGTGCAAAAATATCTCTATAGTTTGAATATAGTTGACTAGCCTCCCAAAAGAATCGAATAGAAAGGTAAAATCACCAGCTAATGGAAATTGGTAATTTTGAATTACTTTCATCTATCGAAGATTAAGAGATTGATCAATTTTGTCATCATTTTAAGCTCTCCAATTTCAGGCAACTGAACCAAGTATCTTTTTCATGTTTCTGACTTACAGATATGCCTGGAGATGTTGTACTTCGCTAGCTACTCCGGTGATGCTGATAGCAGCATACTGCGAGAGACGTGGGCTAGGCTCATTGATCAAGCTCTTATGAGGGGTGGGATTGCTGAAGCTTGTGCTGTACTGAAGAGGGTTGGTACCCATGTGTATCCCGGAGATGGAACTGTTTTACCATTTGATACTCTCTGTCTTCACCTTGAAAAGGCTGCACTGGTATGGGCTATTACCCCTTTCGAGCTGCCCCTGCCCATTTTCATTCTGCTAGTTCCCTTGCATGTGCTTTCAACTAATTCAATGCTTCATTTTGAAATTTAAACATGATTGCATCCTTTAATACTGTGAAGGAACAAGTGGTTTCTGGTGCTGAATCTGTTGGAGATGAAGATATTCCTAGGGCTCTTTTAGCTGCTTGCAAGGGTGCAGTAGAGCCTGTATTAAATACTTATGACCAGCTGTTATCAAG</genome_strand>
        <mrna_strand>TGCTCCACTAATGCAGGGGATGCTCCTACTTTA-AACAAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGCAATACTTGAGTAATGCTGTTTTGCAAGCAAAGAGTGCCCATGATAGCGATGGTATGAGTGGTTCTTCCCGGGGTGCTCTTGACAATGGACTGCTTGATTTGCTCGAAGGAAAGCTTGCTGTTCTTCAGTTTCAAATTAAAATTAAAGATGAACTGGAGGCTATGTCTTCCAGGTTAGAGTCATCTACAAGCACATCTGAATCTGGTTCTGGTGAAACATCACCCAATATGAGTAATATTCTTCGAGAAAAAGCCAAGGAGTTATCGATGGAATTGAAGAGCATTACACAGTTGTATAATGACTATGCTGTTCCTTTTGAGATATGGGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGTCTGGAGATGTTGTACTTTGCTAGCTACTCTGGTGATGCTGATAGCAGCATACTGCGAGAGACATGGGCTAGGCTCATTGATCAAGCTCTTATGAGGGGTGGGATTGCTGAAGCTTGTGCTGTACTGAAGAGGGTTGGTACCCATATGTATCCCGGAGATGGAGCTGTTTTACCATTTGATACTCTCTGTCTTCACCTTGAGAAGGCTGCACTG...................................................................................................................................GAGCAAGTGGTTTCTGGTGCTGAATCTGTTGGAGATGAAGATATTCCTAGGGCTCTTTTAACTGCTTGCAAGGGTGCAGTAGAGCCTGTATTAAATACTTATGACCAGCTGTTATCCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0078D19-pLPJK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E210318" ref_strand="+" ref_description="SGN-E210318 [cLEC-35-K16]">
      <seq>tatgtcttccaggttagagtcatctacaagcacatctgaatctggttctggtgaaacatcacccaatatgagtaatattcttcgagaaaaagcgaaggagctatcaatggaattgaagagcattacacagttgtataatgactatgctgttccttttgagatatgggagatatgcctggagatgttgtacttcgctagctactccggtgatgctgatagcagcatactgcgagagacgtgggctaggctcattgatcaagctcttatgaggggtgggattgctgaagcttgtgctgtactgaagagggttggtacccatgtgtatcccggagatggaactgttttaccatttgatactctctgtcttcaccttgaaaaggctgcactggaacaagtggtttctggtgctgaatctgttggagatgaagatattcctagggctcttttagctgcttgcaagggtgcagtagagcctgtattaaatacttatgaccagctgttatcaagtggggcagtgttgccaactccgaatcttagattgcgtctcctgcgctccgtactggctttacttcgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0078D19-pLPJK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0078D19.1" temp_strand="+" temp_description="C07HBa0078D19.1  AC234404.1 htgs_phase:2 submitted_to_sgn_as:gi|222136704|gb|AC234404.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0078D19, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="8390" stop="10953"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8690" g_stop="8858" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="169" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8859" i_stop="10117" i_length="1259">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.946" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10118" g_stop="10336" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="170" r_stop="388" r_length="219" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="10337" i_stop="10467" i_length="131">
            <donor d_prob="0.491" d_score="1.00"/>
            <acceptor a_prob="0.836" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10468" g_stop="10653" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="389" r_stop="574" r_length="186" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0078D19.1" gen_strand="+" ref_id="SGN-E210318" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0078D19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E210318" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8690" e_stop="8858"/>
          <exon e_start="10118" e_stop="10336"/>
          <exon e_start="10468" e_stop="10653"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATGTCTTCCAGGTTAGAGTCATCTACAAGCACATCTGAATCTGGTTCTGGTGAAACATCACCCAATATGAGTAATATTCTTCGAGAAAAAGCGAAGGAGCTATCAATGGAATTGAAGAGCATTACACAGTTGTATAATGACTATGCTGTTCCTTTTGAGATATGGGAGGTATGATACACAATAAACACACATTTGTCACCATGTGCTCTACTTTATTTATTTGTTTTTGCTCTACTTTTTGCATGATCTTTTTTTAAAAAAAATTTAAACCCGTTTGACCATGAAATTTCACTTTTTCCAGAAAATTGTTTCACTTTATTCAACCTACTTCAAAATTTTCAAATAAAGTGAATTTGATTATTTTGGTTTTTTTTCAGATAAGCTGTACTTTTTTTCCCTTCTTTTTATCATGGATGCTCTGGTAGATAACTCTAGATCGTAAAGAGGTCTATTCTTCATGGGAGTATTTTAAAAAGTGATTTTATTCTCGAATTGCATAACAAGTGAGACCATAGATGTGACTTCTGGATTATAAACTAATTAGAGCAATAGAATATGCCTCTGCTGTTATACTTAACTTTTCAATACCAAATTCCCTGTTTATAAGAGTCACTGTGCAACTATATGGGCTTCTTCGATTTAAAAACAAAATAAAAAAGAAGAGCAACTGGATGGGGTCTCTGTGCAGCAGTGCCAGAGGGCAGCTCAAAGCTTATATCTGAACATCACAGTTTGTAAATGGGTGACATTTCAGCTTGTGAATGCTTCCCAAAGTTTTTCAGCAATTTCCACTTATCCCCTCCCCTTCACTCTTTTTCTTGCCAAGGATTTGTCAATGCCATTCTTAATTTTACATCTTATCTATAAAGAAATGGATATTGCGCCTAACATAACCCCAAAGGCTAGCTCATTGGATGAGTATTTGCTGACGACTACATAAGGAGGCAAACAACTCTTTTCCACATTGATGTGGGGCTCTAACACCGCCTAGTATGCTTAGCACTAGACATCTGGAGCGTGGACAATATAATAATAGGACCCAACATTGGGTAACCCAGGAATTAGGATGGGTCTGTTCTGATGCCAAGGAAAAGAAGTGGATCTTGAGCCTAACTCAGCACTAAGGAGGCAAACCCCCTTATCCTACACTAATGTGTGATTTTAACACCATCTTTCATACACCATTGGCAGTGATCGGCTAGGGCATATTGCTTAATGTGCAAAAATATCTCTATAGTTTGAATATAGTTGACTAGCCTCCCAAAAGAATCGAATAGAAAGGTAAAATCACCAGCTAATGGAAATTGGTAATTTTGAATTACTTTCATCTATCGAAGATTAAGAGATTGATCAATTTTGTCATCATTTTAAGCTCTCCAATTTCAGGCAACTGAACCAAGTATCTTTTTCATGTTTCTGACTTACAGATATGCCTGGAGATGTTGTACTTCGCTAGCTACTCCGGTGATGCTGATAGCAGCATACTGCGAGAGACGTGGGCTAGGCTCATTGATCAAGCTCTTATGAGGGGTGGGATTGCTGAAGCTTGTGCTGTACTGAAGAGGGTTGGTACCCATGTGTATCCCGGAGATGGAACTGTTTTACCATTTGATACTCTCTGTCTTCACCTTGAAAAGGCTGCACTGGTATGGGCTATTACCCCTTTCGAGCTGCCCCTGCCCATTTTCATTCTGCTAGTTCCCTTGCATGTGCTTTCAACTAATTCAATGCTTCATTTTGAAATTTAAACATGATTGCATCCTTTAATACTGTGAAGGAACAAGTGGTTTCTGGTGCTGAATCTGTTGGAGATGAAGATATTCCTAGGGCTCTTTTAGCTGCTTGCAAGGGTGCAGTAGAGCCTGTATTAAATACTTATGACCAGCTGTTATCAAGTGGGGCAGTGTTGCCAACTCCGAATCTTAGATTGCGTCTCCTGCGCTCCGTACTGGCTTTACTTCGT</genome_strand>
        <mrna_strand>TATGTCTTCCAGGTTAGAGTCATCTACAAGCACATCTGAATCTGGTTCTGGTGAAACATCACCCAATATGAGTAATATTCTTCGAGAAAAAGCGAAGGAGCTATCAATGGAATTGAAGAGCATTACACAGTTGTATAATGACTATGCTGTTCCTTTTGAGATATGGGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGCCTGGAGATGTTGTACTTCGCTAGCTACTCCGGTGATGCTGATAGCAGCATACTGCGAGAGACGTGGGCTAGGCTCATTGATCAAGCTCTTATGAGGGGTGGGATTGCTGAAGCTTGTGCTGTACTGAAGAGGGTTGGTACCCATGTGTATCCCGGAGATGGAACTGTTTTACCATTTGATACTCTCTGTCTTCACCTTGAAAAGGCTGCACTG...................................................................................................................................GAACAAGTGGTTTCTGGTGCTGAATCTGTTGGAGATGAAGATATTCCTAGGGCTCTTTTAGCTGCTTGCAAGGGTGCAGTAGAGCCTGTATTAAATACTTATGACCAGCTGTTATCAAGTGGGGCAGTGTTGCCAACTCCGAATCTTAGATTGCGTCTCCTGCGCTCCGTACTGGCTTTACTTCGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0078D19-pLPJK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E343047" ref_strand="+" ref_description="SGN-E343047 [cTOF-11-G18]">
      <seq>ccatgtgtatcccggagatggaactgttttaccatttgatactctctgtcttcaccttgaaaaggctgcactggaacaagtggtttctggtgctgaatctgttggagatgaagatattcctagggctcttttagctgcttgcaagggtgcagtagagcctgtattaaatacttatgaccagctgttatcaagtggggcagtgttgccaactccgaatcttagattgcgtctcctgcgctccgtactggctttacttcgtgaatgggcactttctgtctttgcacagggaatgggtacaagtgttactggagcctctctgattcttggtggaactttatcattaggacagactgcagttggtaatcaaggtgttcgcgataaaataacaagtgcagcaaatcgatatatgacagaagtgcgaagattacctcttccacaaaatcaaactgaagctgtttatcgaggttttcgtgaacttgaagaatcattgttaagtccattcccttttgaacggttttgatttttgtgatatcatatgcttgtacaatatcctgccttttctttgtccttcactgcatatttgatttgaacaaaacaaaatttttctcatgaactgtattttattagttctgatgtttagcattgccttgatacttctgtaacatgtgatcatacatcaatgacagaattgccttagaattggaaaatgattatttaatcaatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0078D19-pLPJK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0078D19.1" temp_strand="+" temp_description="C07HBa0078D19.1  AC234404.1 htgs_phase:2 submitted_to_sgn_as:gi|222136704|gb|AC234404.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0078D19, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="9964" stop="11621"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10264" g_stop="10336" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="73" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10337" i_stop="10467" i_length="131">
            <donor d_prob="0.491" d_score="1.00"/>
            <acceptor a_prob="0.836" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10468" g_stop="10796" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="74" r_stop="402" r_length="329" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="10797" i_stop="10997" i_length="201">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10998" g_stop="11321" g_length="324"/>
          <reference_exon_boundary r_type="cDNA" r_start="403" r_stop="726" r_length="324" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0078D19.1" gen_strand="+" ref_id="SGN-E343047" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>726</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0078D19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E343047" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10264" e_stop="10336"/>
          <exon e_start="10468" e_stop="10796"/>
          <exon e_start="10998" e_stop="11321"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATGTGTATCCCGGAGATGGAACTGTTTTACCATTTGATACTCTCTGTCTTCACCTTGAAAAGGCTGCACTGGTATGGGCTATTACCCCTTTCGAGCTGCCCCTGCCCATTTTCATTCTGCTAGTTCCCTTGCATGTGCTTTCAACTAATTCAATGCTTCATTTTGAAATTTAAACATGATTGCATCCTTTAATACTGTGAAGGAACAAGTGGTTTCTGGTGCTGAATCTGTTGGAGATGAAGATATTCCTAGGGCTCTTTTAGCTGCTTGCAAGGGTGCAGTAGAGCCTGTATTAAATACTTATGACCAGCTGTTATCAAGTGGGGCAGTGTTGCCAACTCCGAATCTTAGATTGCGTCTCCTGCGCTCCGTACTGGCTTTACTTCGTGAATGGGCACTTTCTGTCTTTGCACAGGGAATGGGTACAAGTGTTACTGGAGCCTCTCTGATTCTTGGTGGAACTTTATCATTAGGACAGACTGCAGTTGGTAATCAAGGTGTTCGCGATAAAATAACAAGTGCAGCAAATCGGTTAGTTTCCCATCAGAGATTACTAATATATGTCTTTTCACTCATTTCAGCAGTATCTAGATAGGCTTTTCAACTCTTGTGTTATCTTCTTTCATGTTATGGTTCTACCAATCTGGCTGGTTTGCTATATAAATGCTTTACGGTCACCAGTTTTATCATTACATATCTAAATCCGTCGTTTTGTTTTCTCGGTTTAACCAGATATATGACAGAAGTGCGAAGATTACCTCTTCCACAAAATCAAACTGAAGCTGTTTATCAAGGTTTTCGTGAACTTGAAGAATCATTGTTAAGTCCATTCCCTTTTGAACGGTTTTGATTTTTGTGATATCATATGCTTGTACAATATCCTGCCTTTTCTTTGTCCTTCACTGCATATTTGATTTGAACAAAACAAATTTTTTCTCATGAACTGTATTTTATTAGTTCTGATGTTTAGCATTGCCTTGATACTTCTGTAACATGTGATCATACATCAATGACAGAATTGCCTTAGAATTGGAAAATGATTATTTAATCAATTTT</genome_strand>
        <mrna_strand>CCATGTGTATCCCGGAGATGGAACTGTTTTACCATTTGATACTCTCTGTCTTCACCTTGAAAAGGCTGCACTG...................................................................................................................................GAACAAGTGGTTTCTGGTGCTGAATCTGTTGGAGATGAAGATATTCCTAGGGCTCTTTTAGCTGCTTGCAAGGGTGCAGTAGAGCCTGTATTAAATACTTATGACCAGCTGTTATCAAGTGGGGCAGTGTTGCCAACTCCGAATCTTAGATTGCGTCTCCTGCGCTCCGTACTGGCTTTACTTCGTGAATGGGCACTTTCTGTCTTTGCACAGGGAATGGGTACAAGTGTTACTGGAGCCTCTCTGATTCTTGGTGGAACTTTATCATTAGGACAGACTGCAGTTGGTAATCAAGGTGTTCGCGATAAAATAACAAGTGCAGCAAATCG.........................................................................................................................................................................................................ATATATGACAGAAGTGCGAAGATTACCTCTTCCACAAAATCAAACTGAAGCTGTTTATCGAGGTTTTCGTGAACTTGAAGAATCATTGTTAAGTCCATTCCCTTTTGAACGGTTTTGATTTTTGTGATATCATATGCTTGTACAATATCCTGCCTTTTCTTTGTCCTTCACTGCATATTTGATTTGAACAAAACAAAATTTTTCTCATGAACTGTATTTTATTAGTTCTGATGTTTAGCATTGCCTTGATACTTCTGTAACATGTGATCATACATCAATGACAGAATTGCCTTAGAATTGGAAAATGATTATTTAATCAATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0078D19-pLPJK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E342938" ref_strand="+" ref_description="SGN-E342938 [cTOF-11-I22]">
      <seq>ccatgtgtatcccggagatggaactgttttaccatttgatactctctgtcttcaccttgaaaaggctgcactggaacaagtggtttctggtgctgaatctgttggagatgaagatattcctagggctcttttagctgcttgcaagggtgcagtagagcctgtattaaatacttatgaccagctgttatcaagtggggcagtgttgccaactccgaatcttacattgcgtctcctgcgctccgtactggctttacttcgtgaatgggcactttctgtctttgcacagggaatgggtacaagtgttactggagcctctctgattcttggtggaactttatcattaggacagactgcagttggtaatcaaggtgttcgcgataaaataacaagtgcagcaaatcgatatatgacagaagtgcgaagattacctcttccacaaaatcaaactgaagctgtttatcgaggttttcgtgaacttgaagaatcattgttaagtccattcccttttgaacggctctgatttttgtgatatcatatgcttgtacaatatcctgccttttctttgtccttcactgcatatttgatttgaacaaaacagaatttctctcatgaactgcattttattagatctgatgtttagcattgccttgatacttctgtaacatcgtgatcatacatcaatgacagaaatgcctttgaattggaaaatgatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0078D19-pLPJK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0078D19.1" temp_strand="+" temp_description="C07HBa0078D19.1  AC234404.1 htgs_phase:2 submitted_to_sgn_as:gi|222136704|gb|AC234404.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0078D19, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="9964" stop="11608"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10264" g_stop="10336" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="73" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10337" i_stop="10467" i_length="131">
            <donor d_prob="0.491" d_score="1.00"/>
            <acceptor a_prob="0.836" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10468" g_stop="10796" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="74" r_stop="402" r_length="329" r_score="0.997"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="10797" i_stop="10997" i_length="201">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10998" g_stop="11308" g_length="311"/>
          <reference_exon_boundary r_type="cDNA" r_start="403" r_stop="714" r_length="312" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0078D19.1" gen_strand="+" ref_id="SGN-E342938" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0078D19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E342938" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10264" e_stop="10336"/>
          <exon e_start="10468" e_stop="10796"/>
          <exon e_start="10998" e_stop="11308"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATGTGTATCCCGGAGATGGAACTGTTTTACCATTTGATACTCTCTGTCTTCACCTTGAAAAGGCTGCACTGGTATGGGCTATTACCCCTTTCGAGCTGCCCCTGCCCATTTTCATTCTGCTAGTTCCCTTGCATGTGCTTTCAACTAATTCAATGCTTCATTTTGAAATTTAAACATGATTGCATCCTTTAATACTGTGAAGGAACAAGTGGTTTCTGGTGCTGAATCTGTTGGAGATGAAGATATTCCTAGGGCTCTTTTAGCTGCTTGCAAGGGTGCAGTAGAGCCTGTATTAAATACTTATGACCAGCTGTTATCAAGTGGGGCAGTGTTGCCAACTCCGAATCTTAGATTGCGTCTCCTGCGCTCCGTACTGGCTTTACTTCGTGAATGGGCACTTTCTGTCTTTGCACAGGGAATGGGTACAAGTGTTACTGGAGCCTCTCTGATTCTTGGTGGAACTTTATCATTAGGACAGACTGCAGTTGGTAATCAAGGTGTTCGCGATAAAATAACAAGTGCAGCAAATCGGTTAGTTTCCCATCAGAGATTACTAATATATGTCTTTTCACTCATTTCAGCAGTATCTAGATAGGCTTTTCAACTCTTGTGTTATCTTCTTTCATGTTATGGTTCTACCAATCTGGCTGGTTTGCTATATAAATGCTTTACGGTCACCAGTTTTATCATTACATATCTAAATCCGTCGTTTTGTTTTCTCGGTTTAACCAGATATATGACAGAAGTGCGAAGATTACCTCTTCCACAAAATCAAACTGAAGCTGTTTATCAAGGTTTTCGTGAACTTGAAGAATCATTGTTAAGTCCATTCCCTTTTGAACGGTTTTGATTTTTGTGATATCATATGCTTGTACAATATCCTGCCTTTTCTTTGTCCTTCACTGCATATTTGATTTGAACAAAACAAATTTTTTCTCATGAACTGTATTTTATTAGTTCTGATGTTTAGCATTGCCTTGATACTTCTGTAACAT-GTGATCATACATCAATGACAGAATTGCCTTAGAATTGGAAAATGATTA</genome_strand>
        <mrna_strand>CCATGTGTATCCCGGAGATGGAACTGTTTTACCATTTGATACTCTCTGTCTTCACCTTGAAAAGGCTGCACTG...................................................................................................................................GAACAAGTGGTTTCTGGTGCTGAATCTGTTGGAGATGAAGATATTCCTAGGGCTCTTTTAGCTGCTTGCAAGGGTGCAGTAGAGCCTGTATTAAATACTTATGACCAGCTGTTATCAAGTGGGGCAGTGTTGCCAACTCCGAATCTTACATTGCGTCTCCTGCGCTCCGTACTGGCTTTACTTCGTGAATGGGCACTTTCTGTCTTTGCACAGGGAATGGGTACAAGTGTTACTGGAGCCTCTCTGATTCTTGGTGGAACTTTATCATTAGGACAGACTGCAGTTGGTAATCAAGGTGTTCGCGATAAAATAACAAGTGCAGCAAATCG.........................................................................................................................................................................................................ATATATGACAGAAGTGCGAAGATTACCTCTTCCACAAAATCAAACTGAAGCTGTTTATCGAGGTTTTCGTGAACTTGAAGAATCATTGTTAAGTCCATTCCCTTTTGAACGGCTCTGATTTTTGTGATATCATATGCTTGTACAATATCCTGCCTTTTCTTTGTCCTTCACTGCATATTTGATTTGAACAAAACAGAATTTCTCTCATGAACTGCATTTTATTAGATCTGATGTTTAGCATTGCCTTGATACTTCTGTAACATCGTGATCATACATCAATGACAGAAATGCCTTTGAATTGGAAAATGATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0078D19-pLPJK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E342900" ref_strand="+" ref_description="SGN-E342900 [cTOF-11-K19]">
      <seq>gttttaccctttgatactctctgtcttcaccttgaaaaggctgcacctggaacaagtggtttctggtgctgaatctgttggagatgaagatattcctagggctcttttagctgcttgcaagggtgcagtagagcctgtattaaatacttatgaccagctgttatcaagtggggcagtgttgccaactccgaatcttagattgcgtctcctgcgctccgtactggctttacttcgtgaatgggcactttctgtctttgcacagggaatgggtacaagtgttactggagcctctctgattcttggtggaactttatcattaggacagactgcagttggtaatcaaggtgttcgcgataaaataacaagtgcagcaaatcgatatatgacagaagtgcgaagattacctcttccacaaaatcaaactgaagctgtttatcgaggttttcgtgaacttgaagaatcattgttaagtccattcccttttgaacggttttgatttttgtgatatcatatgcttgtacaatatcctgccttttctttgtccttcactgcatatttgatttgaacaaacaaaatttttctcatgaactgtattttattagttctgatgtttagcattgccttgatacttctgtaacatggtgatcatacatcaatgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0078D19-pLPJK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0078D19.1" temp_strand="+" temp_description="C07HBa0078D19.1  AC234404.1 htgs_phase:2 submitted_to_sgn_as:gi|222136704|gb|AC234404.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0078D19, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="9989" stop="11579"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10289" g_stop="10336" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="49" r_length="49" r_score="0.938"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10337" i_stop="10467" i_length="131">
            <donor d_prob="0.491" d_score="0.94"/>
            <acceptor a_prob="0.836" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10468" g_stop="10796" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="378" r_length="329" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="10797" i_stop="10997" i_length="201">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10998" g_stop="11279" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="379" r_stop="660" r_length="282" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0078D19.1" gen_strand="+" ref_id="SGN-E342900" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0078D19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E342900" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10289" e_stop="10336"/>
          <exon e_start="10468" e_stop="10796"/>
          <exon e_start="10998" e_stop="11279"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTACCATTTGATACTCTCTGTCTTCACCTTGAAAAGGCTGCA-CTGGTATGGGCTATTACCCCTTTCGAGCTGCCCCTGCCCATTTTCATTCTGCTAGTTCCCTTGCATGTGCTTTCAACTAATTCAATGCTTCATTTTGAAATTTAAACATGATTGCATCCTTTAATACTGTGAAGGAACAAGTGGTTTCTGGTGCTGAATCTGTTGGAGATGAAGATATTCCTAGGGCTCTTTTAGCTGCTTGCAAGGGTGCAGTAGAGCCTGTATTAAATACTTATGACCAGCTGTTATCAAGTGGGGCAGTGTTGCCAACTCCGAATCTTAGATTGCGTCTCCTGCGCTCCGTACTGGCTTTACTTCGTGAATGGGCACTTTCTGTCTTTGCACAGGGAATGGGTACAAGTGTTACTGGAGCCTCTCTGATTCTTGGTGGAACTTTATCATTAGGACAGACTGCAGTTGGTAATCAAGGTGTTCGCGATAAAATAACAAGTGCAGCAAATCGGTTAGTTTCCCATCAGAGATTACTAATATATGTCTTTTCACTCATTTCAGCAGTATCTAGATAGGCTTTTCAACTCTTGTGTTATCTTCTTTCATGTTATGGTTCTACCAATCTGGCTGGTTTGCTATATAAATGCTTTACGGTCACCAGTTTTATCATTACATATCTAAATCCGTCGTTTTGTTTTCTCGGTTTAACCAGATATATGACAGAAGTGCGAAGATTACCTCTTCCACAAAATCAAACTGAAGCTGTTTATCAAGGTTTTCGTGAACTTGAAGAATCATTGTTAAGTCCATTCCCTTTTGAACGGTTTTGATTTTTGTGATATCATATGCTTGTACAATATCCTGCCTTTTCTTTGTCCTTCACTGCATATTTGATTTGAACAAAACAAATTTTTTCTCATGAACTGTATTTTATTAGTTCTGATGTTTAGCATTGCCTTGATACTTCTGTAACAT-GTGATCATACATCAATGAC</genome_strand>
        <mrna_strand>GTTTTACCCTTTGATACTCTCTGTCTTCACCTTGAAAAGGCTGCACCTG...................................................................................................................................GAACAAGTGGTTTCTGGTGCTGAATCTGTTGGAGATGAAGATATTCCTAGGGCTCTTTTAGCTGCTTGCAAGGGTGCAGTAGAGCCTGTATTAAATACTTATGACCAGCTGTTATCAAGTGGGGCAGTGTTGCCAACTCCGAATCTTAGATTGCGTCTCCTGCGCTCCGTACTGGCTTTACTTCGTGAATGGGCACTTTCTGTCTTTGCACAGGGAATGGGTACAAGTGTTACTGGAGCCTCTCTGATTCTTGGTGGAACTTTATCATTAGGACAGACTGCAGTTGGTAATCAAGGTGTTCGCGATAAAATAACAAGTGCAGCAAATCG.........................................................................................................................................................................................................ATATATGACAGAAGTGCGAAGATTACCTCTTCCACAAAATCAAACTGAAGCTGTTTATCGAGGTTTTCGTGAACTTGAAGAATCATTGTTAAGTCCATTCCCTTTTGAACGGTTTTGATTTTTGTGATATCATATGCTTGTACAATATCCTGCCTTTTCTTTGTCCTTCACTGCATATTTGATTTGAAC-AAACAAAATTTTTCTCATGAACTGTATTTTATTAGTTCTGATGTTTAGCATTGCCTTGATACTTCTGTAACATGGTGATCATACATCAATGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0078D19-pLPJK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E214438" ref_strand="+" ref_description="SGN-E214438 [cLEC-77-F5]">
      <seq>tgagaaggactccaaaatggctgatcatactgctgagcaggatgtccaaatggctgatcatgcagctgagaagaaagatgaaatgcattcttctgctgttgatgttgtggaaaagaaccaagctgaaaaaatgggtgaaggccaaaaggcaggagatggtccttctaaagaggctgaggttgagaaagatgacaaaatgtcagactgtgttgcagagaagaaagataaaacttctgatgttgatgctgtgaaaagtgatgacccaactgaagatggaaaagcagaagatgctcctgctgatgtgtctgcggctgacaaaaatgttggagatgctttcatggtgaaagaggtgccaattgggaaagcagcggatgaagctgaagcaactgataacggtgtcaacaccgatgagattaacccttgaatagtgacatggagccattctctgctaccctcgtaccctgctctcttattctctctaacctcttacccttgttacttttctctagtgactgtagtgttgttgtcaatggtagtactctcagactgttcatgagatatctgtat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0078D19-pLPJK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0078D19.1" temp_strand="-" temp_description="C07HBa0078D19.1  AC234404.1 htgs_phase:2 submitted_to_sgn_as:gi|222136704|gb|AC234404.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0078D19, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="13402" stop="12236"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13102" g_stop="12536" g_length="567"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="567" r_length="567" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0078D19.1" gen_strand="-" ref_id="SGN-E214438" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>567</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0078D19.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E214438" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13102" e_stop="12536"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGAAGGACTCCAAAATGGCTGATCATACTGCTGAGCAGGATGTCCAAATGGCTGATCATGCAGCTGAGAAGAAAGATGAAATGCATTCTTCTGCTGTTGATGTTGTGGAAAAGAACCAAGCTGAAAAAATGGGTGAAGGCCAAAAGGCAGGAGATGGTCCTTCTAAAGAGGCTGAGGTTGAGAAAGATGACAAAATGTCAGACTGTGTTGCAGAGAAGAAAGATAAAACTTCTGATGTTGATGCTGTGAAAAGTGATGACCCAACTGAAGATGGAAAAGCAGAAGATGCTCCTGCTGATGTGTCTGCGGCTGACAAAAATGTTGGAGATGCTTTCATGGTGAAAGAGGTGCCAATTGGGAAAGCAGCGGATGAAGCTGAAGCAACTGATAACGGTGTCAACACCGATGAGATTAACCCTTGAATAGTGACATGGAGCCATTCTCTGCTACCCTCGTACCCTGCTCTCTTATTCTCTCTAACCTCTTACCCTTGTTACTTTTCTCTAGTGACTGTAGTGTTGTTGTCAATGGTAGTACTCTCAGACTGTTCATGAGATATCTGTAT</genome_strand>
        <mrna_strand>TGAGAAGGACTCCAAAATGGCTGATCATACTGCTGAGCAGGATGTCCAAATGGCTGATCATGCAGCTGAGAAGAAAGATGAAATGCATTCTTCTGCTGTTGATGTTGTGGAAAAGAACCAAGCTGAAAAAATGGGTGAAGGCCAAAAGGCAGGAGATGGTCCTTCTAAAGAGGCTGAGGTTGAGAAAGATGACAAAATGTCAGACTGTGTTGCAGAGAAGAAAGATAAAACTTCTGATGTTGATGCTGTGAAAAGTGATGACCCAACTGAAGATGGAAAAGCAGAAGATGCTCCTGCTGATGTGTCTGCGGCTGACAAAAATGTTGGAGATGCTTTCATGGTGAAAGAGGTGCCAATTGGGAAAGCAGCGGATGAAGCTGAAGCAACTGATAACGGTGTCAACACCGATGAGATTAACCCTTGAATAGTGACATGGAGCCATTCTCTGCTACCCTCGTACCCTGCTCTCTTATTCTCTCTAACCTCTTACCCTTGTTACTTTTCTCTAGTGACTGTAGTGTTGTTGTCAATGGTAGTACTCTCAGACTGTTCATGAGATATCTGTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0078D19-pLPJK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E318965" ref_strand="+" ref_description="SGN-E318965 [cTOB-14-H19]">
      <seq>gtttttcattttttcagaaaaattgagttaggtgaggagaaggaaggaagacgaagagagaaaaatgtcgagctctgtggagatgaatgaagttgtttccattgagcttccagctccaaatggctggttgaaaaggtttctgcctaagaaaggagggacgccaaagaaaaatgagatcgtgtttactgcaccaacaggggaggagattactacaaagaaacagttgcagcagtacctgaagtctcaccctggtggtcctgcaatcactgagtttgactggggaagtggggaagctccaagaagatccacaaggatcactggaaaggcaaagacagctccacttgcagcagaaagtgtgactccaacaaagcgaaacagaagatcttcagcttctaagaaggacgtgaaagacaaaaaagaacaggaagaaactgaggcagcaaaggatgttgacatgccagaagctgacaaacaggaaaaggatggtgtgtctgtggaagctgaaaaacatgaaaaggatgctgtggctgtggaagctggaaaacatgaaaaggatgctgcggctgtggaagctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0078D19-pLPJK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0078D19.1" temp_strand="-" temp_description="C07HBa0078D19.1  AC234404.1 htgs_phase:2 submitted_to_sgn_as:gi|222136704|gb|AC234404.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0078D19, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="23549" stop="12983"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23249" g_stop="23114" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="136" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23113" i_stop="13723" i_length="9391">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13722" g_stop="13283" g_length="440"/>
          <reference_exon_boundary r_type="cDNA" r_start="137" r_stop="576" r_length="440" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0078D19.1" gen_strand="-" ref_id="SGN-E318965" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>576</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0078D19.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E318965" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23249" e_stop="23114"/>
          <exon e_start="13722" e_stop="13283"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTTCATTTTTTCAGAAAAATTGAGTTAGGTGAGGAGAAGGAAGGAAGACGAAGAGAGAAAAATGTCGAGCTCTGTGGAGATGAATGAAGTTGTTTCCATTGAGCTTCCAGCTCCAAATGGCTGGTTGAAAAGGGTATGTTTTTTTTTTCTCTTCTTTCTGTTCTGTTTTTTTCATTTTTATTGTTATTGTTTCAGTTTTTTTTTTTGGTTAATTTTTCTGTTGTTTTCTGTGTTTGGCATTGAAATTTGATGATTTTATGAAAAGGGTTTTGTGGGTTTGTTCTAATTTGTTGTTTTTTCTTCAGGTTGGAATTTTTTAAATTATAGTTTTATGTTATTTTAGGTGTTAAAGCATCAAATTCCCCTTTGTTCTGAAAAGGGTTTTGATTAAGTTTGTGTGGTTATGTAGCCTGTTGTGTTTTTTGAGTGTTCATGTGATAGTTTTGTTGATGAGAAGGATTGTTAACTGGGTTGTCTGGTCTTGTTAAATGTAGATTTTTGTGCTGCAATTGTTGTGAATTTAGGAAATGGGGATATCTTTGTTTAGAGATTTTCCTACTTCTGGAAGATTGAGTTAGGATGGAGTATGAGAAGTTTTGATTGTCACTAACTTCATGATTCAGCTGAATTCACAGAAGTTTTTGGGGGTTGTGTGTTGTTTAGGGATGGCAAATGGGGGCAAACCTGCATAAACCCGCAAAGAATTCGACCCGCCCCACCTAGCAAAATTTGTTTTTTTCTCAACACGCCTCCACCTAGCAAAATTTGTTGTTATTCAAACCGCCTCGCCTAGCTAAAGTTGCTGTTTTTCAACATATCTTGCGTAGCAAAATTTGTTGTTTTTCAACTCGTCTAGCCTGTCCTAATTTGTTGTTTTTCAACTCGCCTCACCTAGGAAAATTTGTTGTTTTTCAACCCACCCCACATGAATTGTTTTCTCCTACTTTCTTCATAACAATGTTTATTACAGTCTAGACTTATGTTCAAAACACAAATGTTTTGATCTAAAATAGACCCAAATTGTAAAAAATAAAGTATTTTTTTTCTCATATCAGAAATGCTATGAAGAAGTCAGCCTCTGTATACTTTTCATTTCTTTTCTTTTCCTTTTGTGGATAGTAAAATTGGATAAAGAAAATCATTTAAACAAAATGTTAATGCAAAATGAATCCAGACCCCTTGCATTGTTTGGTGCCACAAAAATCCAAACTTGCACTAGCAGATCCAGGTTAAGTTTAACACTTCAACTAGCAGATAATTTGGACAGACTTATGTAGAACTGGATCATTAAATAAATGCAAAACTCATTTTTCAAGTTTTTTTTTAATAATAAAACAGTTGTAATTAGGATTTAAAGACAATCCAAAAAGAGATTGTATAAGCATCCGATTCAAGAGGTTGAGTACAAGATTCATGGTGTAATCAAACTTAAAACTTATGAAAGGAAGAAAGCTGAATCCCATCCGCCCCGCAAGCCACAAAAATATCTTTTTTCTTAAACTTAACCACCCACACAACTCCAAACATGTTCGTCCCTGCAAAGGGTCAAACCCGCACCACTCTGCCCCACTGCCACTCCTGATTGTTTTGTCTGTTATAAGTAAAGATTTCCTTTTTAAAATTGTAAAGAGAGTGCTATTTAGCGTTAACGGTATATAAGACTACTAGACAGCTCAAGCTTAAAAACTCTAACTTGCCTACCAGTTGACCACCATAACCAATGAAGACAGTCCCTAACCAAAGGGGACTGAATCAACTGGTAGACAAGTTAGAGTGTTAAAGCTTGAGTTGTCTAGTAGTCCTACATATCTTTTTACAAGTTGGGGTAGGGGGCTTCCCTGTGAGGGGGGGGGGGATAAAGTGGTATTAAGAGAAATAACCTAGCCTTTTAAACCAAAAATTGGAAGTGAAAAAACTTCAGTCCTGACTTATTAATTGGCTTTGAAAATCATGGCTTCAGGGAAGTGAAGTTTCTTAAGAGTGGAATCTAAAGAACTACCTGTCTGACGGTTTCAAGATGTACCAGAAATGATCCTTTTGTAATTTAAGTTTGTATTTAAGTACTCAATCTGCAACTTTTCTTGATGGAGGATAATGTGCTGGTTCTTTCTATTTTTCAGATCCTGCAATTTAATTAAAGTTGAGACTTTGTTTACAAAAAGGACTTCTCAAGTCCTTTTATTAGTATCTAAAAAGATGAATAAGCTAATTCACATATCAAAATAGACTCTAACTGTTATGATTCTAATTAAAGGAAACAGGACCGCCTGATTCACTTTCAGAAGTTCTGTCTTTTATACGAAACTGTCAACTTGTACTTGGATAGGCTCAAGCTTATTGAAACTTGCTTTTGGTTGAGTTTAAGCTTTGGACATGAATATTAAACCAAAATGCTCCAAAGCTAATTGTCTTATTGCATCTAATTATAATAACATATTTCCTTCTCGTCAAACGGCGGATAGCTTTTTGGTAAGGACCGTTCACCTCCAACCATAATGATTGGTGGTTTGAGTCAGCACGGTAGCAAAAGTGGGAAAGGATCATGTTGGGCAGCTTGGTTTAGGGGTCTGGGAGGTGAGTTAACCATGAAAAACTATATGTATTTTCATGGTTTACTAAGTTAGTAGATTCATTGCGGGTACTTATCCAATACGTGTGTGGAAGTATCAGATAGGAGTATGTCAAACTTTTTGCTATAAGTTTAGCATATGTTGAAGAAAGTTTTGAGTCCCTTGCTTCGTCTCTATTTTGTGGGATCTCATTGTTAAAGGATTCTCCACATTCACCTCTGCCGTCACCCTCCTCCATCAAGAATTTATGCACATTTAGTTGTGCTCCAGAACTAGGCTCAAAAACTCTTGAGGCAATTGGAGCTAAATTAAAGCTTGCTACTTGTTAGATTTTGTGCAGGATGGCCAACTTAATGATACATGAACTTGGATGTTCTTCGATCGAATATATGTTTAAATTTTGGCACTTTTTAAGTGTGTCATCAGATATCATAATGAGGTACCAATACAAATGTTGCATCCCTTTTTGACACTTTCTGTAAAGAGGCAAGATGAGAAGTCCATGGAACACTGGTTCAGCTTGGCTCAATTAGGACTAGTTTCACCATATGGGGTCGTATGGTTTGTGAACAAGTTATATAGGGTTTATCATGTGGGATTAATGCCGCTTCAGGATTTTCTCAACTGGCAAAAATTGAGGGACTTGTGTCTTAGGTCACAAGTTTCAGCTTTATGCCAAGTGAACTTGATGTCGCTATTGGCTTTGGGCCAGCACTGTTGCTGCTTGTAGTTCAGCATTCGATATCGTCAAGACTCCTACAAAAATTGCAGCCAGACGCTGAAAGAAAATTCCCGTACTCTGATTCTTTCGGCTACTCCATGAAAATATTTAAGGCAGGAGGACTTCTCGAACTCTACAATGGATTTCCTGCACATTGGATTCAGTTCTCCCTTGTGTGATGATGACTCTAATTTTCCTTAAACAAATTCAGGAGGTGGAGACGAAAATTGGAACGGTCAACAGCCGCATCCACTCCAGTTTAGTCTCTATATTTTGAGCAGTCGCCTTATTGTCGTGGTGTTGTTTTCTTAGTTTATGTAAATTCATGCCTTCGAAGTGGCTAGGTACACTTCAAGATTTTTTTTCCGGAAAAACCCTACTTCATTGTGAATATTCTTTTAAGGTTGTACTTTATGTACTATTCATGTTGCAGTAGATATTTGGAGCTACATCAATTTGGTATGTCTTTCTCTTTCTTGAGCTCAAACTAGTTACTAAGACCTTTGTTTTGTGAGTACCTCTCATTCTCCTCCACCCCACACACACGTGCAAAAAGAAAGAAAAGAGAAGAAGGAACTAAGAAGTCTGATGAAAGCAACTTTCTTTAAGGCTTGTGGACAATGATTAACACACAAATCCTGGAAAAAGCTGGATTGACAACCTTGAAAACCAAGGATTGAATCTTAAACGTTGGTGAAGGTACCAAGTACATATGCAGTTAGGAGGTTGCAAGTACATGATAGGTTCTCACTTGGATCCTTTCTTTTAGGACAACTGTGGTGTCGGGGCTAGCTTGATGCACCTCGACTAATTCCACGGGATACCTGACACCTCCCATCAACAACTGGTATAAGGTAACTATCTACCAAGACTAGGACAATTCGGGAAAAAATCACCTAGTTTGTTGTCTATATTAGGTTTCAACCTCAGAACTCATTGTTCTCCATTCACTTCATTGACCACTGCCACATTATTGGGTGCTCCCTAGACTCTTTTGGTAGCACACACATAAGATCAGTGTTATTATAGGTTAAATGCAAATAAAAGAGAGTTTATTCGAGGTTTTAAGCGATAACACAAATAAAGAACGAATTTAACGAAGAACGATGAATGAAGAAAAAATAAATATGCTAAGCGATTGAAATTTTAAGTCACGGACTTGATTTCCTGTTAGTGGACTTGAAGCTCAAACTTCGTATCAATGCACCAACAGGTGATAAGTCGTCCACTGCAAGAAAGGGAATATCATGACTTGTTACTGCATTAATACCTATTCAAAGTTTAAGCTTTGAAGTCCATAAACCTCATTCGAGTGAAATGGGATACATCCATGCTTCTCAACTTTCATGATTGGAGAATCATGATTTGGGATAGCTCTCTACCCTTTATGGTCATAGAATTATCTCTTGAAGACCTCCCATTTGTCACCTATCTTGCAATTATCACTGTTAGTCCCATTTTCTATAATAATGCAGTGTATCAAGAAAATATCTTTTTAAATAATGTTTTGTATCCATGCATTTCGTCACATTTTATTTTCTTCCTATTACCAACCTCCTATTTTACTAGATTTGTAAATCCACCCATAGCATCTTGATATTCTTCCATAAAGCTACATATTGAGATGAATTAGTCTTGGCTTTTCGTGTCATACTTAGCTTTGATAACCAACAACAACATACCCTGTGTAACCCCACAAGTGAAGTATGGGGAAGGTAAGATGTACGCAGAGAAGGGTTACAAGAATTAAAAAAAATAACAACAACATATCTAGATAAAAAATAAAATGAAGCAACATATTGTAGAAGCACATAGAAGAATAAGAAACTACATGATTGCTAATTACTACTACTATAATAAGGAGAAGAGGATATTGAGCAAGGCCCCTGCCTCCCCCAGTCCTTTTGGAGCTAGCATAGCTGATGATATGGTATAGCCCTTCTCTAGCCTAGTCTAGGGACCACACTCATCTACGTACTAATCTTCTACTTTAATCCTCATCCTTCTTGCCTTCCTATTTAGGATTTTGTCGGTAGGCGATTGAAGTTGTGTCATGTCTTGTCTAATTACCTCTTCTGGGTTCTTTTTCGGTCTACCTCTACCTCTCCTTACTCTTGCTACAACGAACTTCTCACACCTTCCAATGGGCGCATCCGCGTACCTCTTATTCACATGCTTGAACTATCTCAGGCTTTCTTTTCTATAAATCAAGTTCCTATTAAATTTTGTTGCAACTTAAAACCATAAACGATTATCATGTCCAATAAATCATGTTTTCTTTCAGCTAATATGCTACTAAAGAAACTTCTTCAACTACACAACTTTTGGAGACCACAATATTCCTCTTTTACCTCAAAAGATTTATAGGTCATCAACCTACAAAATGTTGGATGTTGGCACATTGTTTCCTATGTCCCTAATTTGATTATGATGGAATACTTGACACAAGTGATGCAACATTTAATTCATTAAATCTACCTATCAACAAAATCGAAAGTATTGTTCGACAAAATTTAGTAAAACCAACATTCACTACCGAAAAGGAAAGACCACGCAACACGGTTAACACCTTTTTGGTCTAATTTTCACATAACACGTGTCACCAATGGTTTACGCATTAAAAATTTAAAGAAATCAGAACTTCACCTTATTTATTAATTATATTTTCCTATTTCTTTGTAGTATTTGTAGTATACAACTTATCTATTGATTATGTTTCCTATTTCTTTGTAGCTGTAATTAGCAATAAGGAGGTTATTCCTCCATTCACATTTTAGTAGTAGTACGAAGTTATTTCCTTGTTATTAGGTGGGCCGTGGGTGGTTAATCTACTAATGTGCATTTAAAGTTATTTGAATTCAATGAAAAGATAAGCAAAAAATTGTTCTAGTTTTTGAGTACTTTAACTCAAGAGATTGCAGGTTCAAATGAACACCATAGGTCGTATTAAAGGAAACATTTGATTTCATCTTGTAGTGTCCCATAACTAGGTCCATATTAGGGGACCGTAACAAGTTGGTATTAGAAACGGGAGTTGTGGGAAATCTGATACAAAAATAACTATGCCAACTGTTGACTTTATTCTGAGAAGAACGTGACCAATTTAGCAAGACAATAAGCTATAAATGCTCGCTTTGATGCACTTCAACATAAAATGGTAGTCAGAACCGAGGTTGAAAAGGTAAAGCAGTGGCTACGGGATCAGGGTAAAAACTAGTGAGAATTCCATGATTCCTAAATATACAAAGTTGAATTTTCCACGATCTTGTGGATATGAGGACTCCTTGGGATGGTTGAACATGTGCGAGCATTACTTTCAACACAGGCAAACACCAAAAAAAGGAAAAAAAGGGTCTTGCTTCTTTCGGAAGGAATTGCACAACTCTAGTTTCTTCAACTAGTGAAAGATATGCCTCAATGATATTGGGATGAGTTCAAATGTCAATATTCATTTTGGACCGCCAATCAAAAGTCAAAAGTTGGAAGAATTGGCCAAGTTACGTCAAATTAGATATGTCCAAGAAAGGTTTGAACAATTGGTTTCGTGGGGTAGTACCCTTATACAAGCACAGAAAAGGGTCTTGCTTCCTTTCATTTGGTGGAAATTGCACAACTCTAGTTTCTTCAACTAGTAAAAGATATGCCTCAACTTTTGACTTCTAATTTGACGTTCATTTTGGACCGCCAATTAGAAGTCAAAAGTTAGAAGAATTGGCCAAGTTATGTCACATTGGATCTGTCCAAGAGGTTTGAACAATTGGTTTCGTGGGTTAGTACCCTTGTACAAGCACAAAATAGATGGAATTTTGCATAAATGGTCTTGCTGATTACATGAGGTCAACTAGTTCTTAGATTGATTGAACTCAACATAGTTAGAGATTAAAGGACATAGCCTTTCTTATTATTGCTTGGGTGGAATCAGTTGACAAAAAACTCGAACGTAATTGACTTCTTTCTAATTTAAATAAAGAAAGAGTTGATTTGGAGAAGAACTTGATCCTCTCCTAGCAGTGAAGTGTCATATCCTAGAGTGAGGGCTTTACCGGTCGTTAAGATAGAGTTGGTGCCGGTAGTTGTTCTTGCAAAATTGAGGGAGAGTTGCATAATCCTCCAGATTTGGCTATAGCGGTGAATATTTCCCGACTTTATGAATGCAAGGAACAACCTCTTTGTTTGCAATCATTAGATGCTTGTAGAACAAAGACAACAAATTTCTCACCTCAACAACCACCAGATTTGAAAAACTAACCAAATTTAAAATGGAGGAAAGGTGACTTAAGGGACTCTATTTCAACTGTGACGAATTATTCACTCTGAGCCATAAGTGAAAGGAATTATTTTTGATTGGTTCCATTGATGATGGGGAAGAATTTGCTGGAAAAGAAAGAAATTCTAGTACTTCCCACATTTTGCTCGAGGACAAGTGCAATTTGAAGGAGGGTAGTAATGTTAGAACCCTTTTAGTCTGCTACCAGTTTACGCATGGAAACTTTAAAGAAATCAGAAAGTAGATTACTTAAGCTTATCTATTAATTATGTTTTCCTATTTCTTTGTAGCAGTTATAAGCAGTAATAGGAGGTTATTCCTCCTCTTTATAATTTCAATAATAGTGCGAAGTTATTTCCTTGCTATCAAGTGGGTGGATAATCTACCATTATGTTATTTAAAGTAATTTGAATTTCAGTGAAAAGATAAGCAGAAAATTATTCCAGTTTTTGAGTACTTTAACTCGAGAGATTGCAGGTTCTCTCTTAACGAACCAACAACATAGGTTGTATCATGCAGTGCCCCATAACTTAGATCCATATTAGGGGACCATAACAACCCACATTGTTCTGACTCCGTATTGGTCTATCTTTCTTCCATTGAACAAGGCATCTGTGATTTCCCTTCTTTGCATGGAGGCATTTCTCACATTCATTGTCAGAATCTGAGACTCTGATATTGTATTAACTGTTCCGTTCTTTCATTCAATACTTTAGCTTCTATCTTGCCCATTAATGATGATAGCATCACTTATTTCTGTATATCTATTGTTCAACCCATTTATTTTACATTTTTTATGAGAATCTTATTTGTCTGTGTGGGTAGCATCCTCTTGTTGCTTTCTTTGAATATGATTTTACAGATACTAAAATGATGCAGTTGTAGGGTGATGTTGTTATTCATTTACTTGTTTATTAAAATATCTTACTAACTAGATTCGGTTAAATGTCAGTTCTACTTGGGTTGTGGCACAAAATAAGTCTTTCCTCCTAATAATAGTTACGAGTTTCCCTATCCGCAAAAAGATTTACTTGTTTTAATGCTTATTTCACTCCTCATCTATTTACATGGAAGGCATTATGACCAGCAGTTTTGACAGGGTTGTCTCATTTGTAAAGCTTGTGTTCATTGTAGTACCAAGTTATTGCTTTGGTTTGCACCCAAGTGTTTAATAAAGTTGGTGCAAACCTTAGAGACAGATGTTAAATCCCAGTTGAGACATAAATTACTAACAGATTTCATCACGTTTGCCTATCCTATGCTTTGATGGGCAGAGTTACCGATGGAATAGCCGAGCTACGCAGTAGCTGACTCAGACACTGCCATTTCAAAGAAAGAAAACAAAATTATTGGTTTTACACTTTCTTAACTGTTTCTTCTGTGTTGTCATTTTATATGCATAGACAAAAATGTGTTATTGATTTCAGGGTGCTTTTGGCTTGGTTGCTATTTCTTTGTTAAATGTATACTACTTGTATATCTATAGTGTGCGCTAGTAGTCTGCTAAATTACTTTGTTTGGGGATTAAGTTGATAAATAAGATTTGAAACTCCTGAGAACCCCATTTGATCAGGAAGAGCTACTCATGTGAAACAGTTGCACTCTGACTCATTTATTTACTGAGCTGTAGTGGGATTGTGCATATTCCAAATTCTGTACTAAAAACAGTCGGAACATGGTGGATATTAGCTGAGCCATAAGTTATATATTATTTGCTTATCAAGAATTCATCATTATCTTCTCCTGATGTTGTTAAGTAGTTTTCTTTCCTTGGGAGCTTTGCCTATTGATTTCCTTTTCCATCTCTCAAGTAGTTCCATGTCTTTCTTAGTTTTTGGTTTTTATTTCTTTTCAATGTGTACTCTCCATTTTAGCAGCCAGCCCAATAAAAGACTAGGAATATAAAAGGAGAATGATGGAGATATTTCAATAACTAATGTCCATTTTTTCTGTTTTTGTACATCAGTTTCTGCCTAAGAAAGGAGGGACGCCAAAGAAAAATGAGATCGTGTTTACTGCACCAACAGGGGAGGAGATTACTACAAAGAAACAGTTGCAGCAGTACCTGAAGTCTCACCCTGGTGGTCCTGCAATCACTGAGTTTGACTGGGGAAGTGGGGAAGCTCCAAGAAGATCCACAAGGATCACTGGAAAGGCAAAGACAGCTCCACTTGCAGCAGAAAGTGTGACTCCAACAAAGCGAAACAGAAAATCTTCAGCTTCTAAGAAGGACGTGAAAGACAAAAAAGAACAGGAAGAAACTGAGGCAGCAAAGGATGTTGACATGCCAGAAGCTGACAAACAGGAAAAGGATGGTGTGTCTGTGGAAGCTGAAAAACATGAAAAGGATGCTGTGGCTGTGGAAGCTGGAAAACATGAAAAGGATGCTGCGGCTGTGGAAGCTGA</genome_strand>
        <mrna_strand>GTTTTTCATTTTTTCAGAAAAATTGAGTTAGGTGAGGAGAAGGAAGGAAGACGAAGAGAGAAAAATGTCGAGCTCTGTGGAGATGAATGAAGTTGTTTCCATTGAGCTTCCAGCTCCAAATGGCTGGTTGAAAAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTGCCTAAGAAAGGAGGGACGCCAAAGAAAAATGAGATCGTGTTTACTGCACCAACAGGGGAGGAGATTACTACAAAGAAACAGTTGCAGCAGTACCTGAAGTCTCACCCTGGTGGTCCTGCAATCACTGAGTTTGACTGGGGAAGTGGGGAAGCTCCAAGAAGATCCACAAGGATCACTGGAAAGGCAAAGACAGCTCCACTTGCAGCAGAAAGTGTGACTCCAACAAAGCGAAACAGAAGATCTTCAGCTTCTAAGAAGGACGTGAAAGACAAAAAAGAACAGGAAGAAACTGAGGCAGCAAAGGATGTTGACATGCCAGAAGCTGACAAACAGGAAAAGGATGGTGTGTCTGTGGAAGCTGAAAAACATGAAAAGGATGCTGTGGCTGTGGAAGCTGGAAAACATGAAAAGGATGCTGCGGCTGTGGAAGCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0078D19-pLPJK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E725689" ref_strand="+" ref_description="SGN-E725689 [LA05BD04]">
      <seq>tgtgggggggcggggagagaaaaatgtcgagctctgtggagacgaatgaagttgtttccattgagcttccagctccaaatggctggttgaaaaggtttctgcctaagaaaggggggacgccaaagaaaaatgagatcgtgtttactgcaccaacaggggaggagattactacaaagagacagttgcagcagtacctgaagtctcaccctggtggtcctgcaatcactgagtttgactggggaagtggggaagctccaagaagatccacaaggatcactggagaggcaaagacagctccacttgcagcagaaagtgtgactccaacaaagcgaaacagaagatcttcagcttctaagaaggacgtgaaagacaaaaaagaacaggaagaaactgaggcagcaaaggatgttgacatgccagaagctgacaacaggaaaaggatggtgtgtctgtggaagctgaaaacatgaaaggatgctgtgtctgtggaagctggaaacatgaaaggatgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0078D19-pLPJK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0078D19.1" temp_strand="-" temp_description="C07HBa0078D19.1  AC234404.1 htgs_phase:2 submitted_to_sgn_as:gi|222136704|gb|AC234404.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0078D19, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="23504" stop="12999"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23208" g_stop="23114" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="95" r_length="95" r_score="0.905"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23113" i_stop="13723" i_length="9391">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13722" g_stop="13299" g_length="424"/>
          <reference_exon_boundary r_type="cDNA" r_start="96" r_stop="514" r_length="419" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0078D19.1" gen_strand="-" ref_id="SGN-E725689" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0078D19.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E725689" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23208" e_stop="23114"/>
          <exon e_start="13722" e_stop="13299"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAGGAAGACGAAGAGAGAAAAATGTCGAGCTCTGTGGAGATGAATGAAGTTGTTTCCATTGAGCTTCCAGCTCCAAATGGCTGGTTGAAAAGGGTATGTTTTTTTTTTCTCTTCTTTCTGTTCTGTTTTTTTCATTTTTATTGTTATTGTTTCAGTTTTTTTTTTTGGTTAATTTTTCTGTTGTTTTCTGTGTTTGGCATTGAAATTTGATGATTTTATGAAAAGGGTTTTGTGGGTTTGTTCTAATTTGTTGTTTTTTCTTCAGGTTGGAATTTTTTAAATTATAGTTTTATGTTATTTTAGGTGTTAAAGCATCAAATTCCCCTTTGTTCTGAAAAGGGTTTTGATTAAGTTTGTGTGGTTATGTAGCCTGTTGTGTTTTTTGAGTGTTCATGTGATAGTTTTGTTGATGAGAAGGATTGTTAACTGGGTTGTCTGGTCTTGTTAAATGTAGATTTTTGTGCTGCAATTGTTGTGAATTTAGGAAATGGGGATATCTTTGTTTAGAGATTTTCCTACTTCTGGAAGATTGAGTTAGGATGGAGTATGAGAAGTTTTGATTGTCACTAACTTCATGATTCAGCTGAATTCACAGAAGTTTTTGGGGGTTGTGTGTTGTTTAGGGATGGCAAATGGGGGCAAACCTGCATAAACCCGCAAAGAATTCGACCCGCCCCACCTAGCAAAATTTGTTTTTTTCTCAACACGCCTCCACCTAGCAAAATTTGTTGTTATTCAAACCGCCTCGCCTAGCTAAAGTTGCTGTTTTTCAACATATCTTGCGTAGCAAAATTTGTTGTTTTTCAACTCGTCTAGCCTGTCCTAATTTGTTGTTTTTCAACTCGCCTCACCTAGGAAAATTTGTTGTTTTTCAACCCACCCCACATGAATTGTTTTCTCCTACTTTCTTCATAACAATGTTTATTACAGTCTAGACTTATGTTCAAAACACAAATGTTTTGATCTAAAATAGACCCAAATTGTAAAAAATAAAGTATTTTTTTTCTCATATCAGAAATGCTATGAAGAAGTCAGCCTCTGTATACTTTTCATTTCTTTTCTTTTCCTTTTGTGGATAGTAAAATTGGATAAAGAAAATCATTTAAACAAAATGTTAATGCAAAATGAATCCAGACCCCTTGCATTGTTTGGTGCCACAAAAATCCAAACTTGCACTAGCAGATCCAGGTTAAGTTTAACACTTCAACTAGCAGATAATTTGGACAGACTTATGTAGAACTGGATCATTAAATAAATGCAAAACTCATTTTTCAAGTTTTTTTTTAATAATAAAACAGTTGTAATTAGGATTTAAAGACAATCCAAAAAGAGATTGTATAAGCATCCGATTCAAGAGGTTGAGTACAAGATTCATGGTGTAATCAAACTTAAAACTTATGAAAGGAAGAAAGCTGAATCCCATCCGCCCCGCAAGCCACAAAAATATCTTTTTTCTTAAACTTAACCACCCACACAACTCCAAACATGTTCGTCCCTGCAAAGGGTCAAACCCGCACCACTCTGCCCCACTGCCACTCCTGATTGTTTTGTCTGTTATAAGTAAAGATTTCCTTTTTAAAATTGTAAAGAGAGTGCTATTTAGCGTTAACGGTATATAAGACTACTAGACAGCTCAAGCTTAAAAACTCTAACTTGCCTACCAGTTGACCACCATAACCAATGAAGACAGTCCCTAACCAAAGGGGACTGAATCAACTGGTAGACAAGTTAGAGTGTTAAAGCTTGAGTTGTCTAGTAGTCCTACATATCTTTTTACAAGTTGGGGTAGGGGGCTTCCCTGTGAGGGGGGGGGGGATAAAGTGGTATTAAGAGAAATAACCTAGCCTTTTAAACCAAAAATTGGAAGTGAAAAAACTTCAGTCCTGACTTATTAATTGGCTTTGAAAATCATGGCTTCAGGGAAGTGAAGTTTCTTAAGAGTGGAATCTAAAGAACTACCTGTCTGACGGTTTCAAGATGTACCAGAAATGATCCTTTTGTAATTTAAGTTTGTATTTAAGTACTCAATCTGCAACTTTTCTTGATGGAGGATAATGTGCTGGTTCTTTCTATTTTTCAGATCCTGCAATTTAATTAAAGTTGAGACTTTGTTTACAAAAAGGACTTCTCAAGTCCTTTTATTAGTATCTAAAAAGATGAATAAGCTAATTCACATATCAAAATAGACTCTAACTGTTATGATTCTAATTAAAGGAAACAGGACCGCCTGATTCACTTTCAGAAGTTCTGTCTTTTATACGAAACTGTCAACTTGTACTTGGATAGGCTCAAGCTTATTGAAACTTGCTTTTGGTTGAGTTTAAGCTTTGGACATGAATATTAAACCAAAATGCTCCAAAGCTAATTGTCTTATTGCATCTAATTATAATAACATATTTCCTTCTCGTCAAACGGCGGATAGCTTTTTGGTAAGGACCGTTCACCTCCAACCATAATGATTGGTGGTTTGAGTCAGCACGGTAGCAAAAGTGGGAAAGGATCATGTTGGGCAGCTTGGTTTAGGGGTCTGGGAGGTGAGTTAACCATGAAAAACTATATGTATTTTCATGGTTTACTAAGTTAGTAGATTCATTGCGGGTACTTATCCAATACGTGTGTGGAAGTATCAGATAGGAGTATGTCAAACTTTTTGCTATAAGTTTAGCATATGTTGAAGAAAGTTTTGAGTCCCTTGCTTCGTCTCTATTTTGTGGGATCTCATTGTTAAAGGATTCTCCACATTCACCTCTGCCGTCACCCTCCTCCATCAAGAATTTATGCACATTTAGTTGTGCTCCAGAACTAGGCTCAAAAACTCTTGAGGCAATTGGAGCTAAATTAAAGCTTGCTACTTGTTAGATTTTGTGCAGGATGGCCAACTTAATGATACATGAACTTGGATGTTCTTCGATCGAATATATGTTTAAATTTTGGCACTTTTTAAGTGTGTCATCAGATATCATAATGAGGTACCAATACAAATGTTGCATCCCTTTTTGACACTTTCTGTAAAGAGGCAAGATGAGAAGTCCATGGAACACTGGTTCAGCTTGGCTCAATTAGGACTAGTTTCACCATATGGGGTCGTATGGTTTGTGAACAAGTTATATAGGGTTTATCATGTGGGATTAATGCCGCTTCAGGATTTTCTCAACTGGCAAAAATTGAGGGACTTGTGTCTTAGGTCACAAGTTTCAGCTTTATGCCAAGTGAACTTGATGTCGCTATTGGCTTTGGGCCAGCACTGTTGCTGCTTGTAGTTCAGCATTCGATATCGTCAAGACTCCTACAAAAATTGCAGCCAGACGCTGAAAGAAAATTCCCGTACTCTGATTCTTTCGGCTACTCCATGAAAATATTTAAGGCAGGAGGACTTCTCGAACTCTACAATGGATTTCCTGCACATTGGATTCAGTTCTCCCTTGTGTGATGATGACTCTAATTTTCCTTAAACAAATTCAGGAGGTGGAGACGAAAATTGGAACGGTCAACAGCCGCATCCACTCCAGTTTAGTCTCTATATTTTGAGCAGTCGCCTTATTGTCGTGGTGTTGTTTTCTTAGTTTATGTAAATTCATGCCTTCGAAGTGGCTAGGTACACTTCAAGATTTTTTTTCCGGAAAAACCCTACTTCATTGTGAATATTCTTTTAAGGTTGTACTTTATGTACTATTCATGTTGCAGTAGATATTTGGAGCTACATCAATTTGGTATGTCTTTCTCTTTCTTGAGCTCAAACTAGTTACTAAGACCTTTGTTTTGTGAGTACCTCTCATTCTCCTCCACCCCACACACACGTGCAAAAAGAAAGAAAAGAGAAGAAGGAACTAAGAAGTCTGATGAAAGCAACTTTCTTTAAGGCTTGTGGACAATGATTAACACACAAATCCTGGAAAAAGCTGGATTGACAACCTTGAAAACCAAGGATTGAATCTTAAACGTTGGTGAAGGTACCAAGTACATATGCAGTTAGGAGGTTGCAAGTACATGATAGGTTCTCACTTGGATCCTTTCTTTTAGGACAACTGTGGTGTCGGGGCTAGCTTGATGCACCTCGACTAATTCCACGGGATACCTGACACCTCCCATCAACAACTGGTATAAGGTAACTATCTACCAAGACTAGGACAATTCGGGAAAAAATCACCTAGTTTGTTGTCTATATTAGGTTTCAACCTCAGAACTCATTGTTCTCCATTCACTTCATTGACCACTGCCACATTATTGGGTGCTCCCTAGACTCTTTTGGTAGCACACACATAAGATCAGTGTTATTATAGGTTAAATGCAAATAAAAGAGAGTTTATTCGAGGTTTTAAGCGATAACACAAATAAAGAACGAATTTAACGAAGAACGATGAATGAAGAAAAAATAAATATGCTAAGCGATTGAAATTTTAAGTCACGGACTTGATTTCCTGTTAGTGGACTTGAAGCTCAAACTTCGTATCAATGCACCAACAGGTGATAAGTCGTCCACTGCAAGAAAGGGAATATCATGACTTGTTACTGCATTAATACCTATTCAAAGTTTAAGCTTTGAAGTCCATAAACCTCATTCGAGTGAAATGGGATACATCCATGCTTCTCAACTTTCATGATTGGAGAATCATGATTTGGGATAGCTCTCTACCCTTTATGGTCATAGAATTATCTCTTGAAGACCTCCCATTTGTCACCTATCTTGCAATTATCACTGTTAGTCCCATTTTCTATAATAATGCAGTGTATCAAGAAAATATCTTTTTAAATAATGTTTTGTATCCATGCATTTCGTCACATTTTATTTTCTTCCTATTACCAACCTCCTATTTTACTAGATTTGTAAATCCACCCATAGCATCTTGATATTCTTCCATAAAGCTACATATTGAGATGAATTAGTCTTGGCTTTTCGTGTCATACTTAGCTTTGATAACCAACAACAACATACCCTGTGTAACCCCACAAGTGAAGTATGGGGAAGGTAAGATGTACGCAGAGAAGGGTTACAAGAATTAAAAAAAATAACAACAACATATCTAGATAAAAAATAAAATGAAGCAACATATTGTAGAAGCACATAGAAGAATAAGAAACTACATGATTGCTAATTACTACTACTATAATAAGGAGAAGAGGATATTGAGCAAGGCCCCTGCCTCCCCCAGTCCTTTTGGAGCTAGCATAGCTGATGATATGGTATAGCCCTTCTCTAGCCTAGTCTAGGGACCACACTCATCTACGTACTAATCTTCTACTTTAATCCTCATCCTTCTTGCCTTCCTATTTAGGATTTTGTCGGTAGGCGATTGAAGTTGTGTCATGTCTTGTCTAATTACCTCTTCTGGGTTCTTTTTCGGTCTACCTCTACCTCTCCTTACTCTTGCTACAACGAACTTCTCACACCTTCCAATGGGCGCATCCGCGTACCTCTTATTCACATGCTTGAACTATCTCAGGCTTTCTTTTCTATAAATCAAGTTCCTATTAAATTTTGTTGCAACTTAAAACCATAAACGATTATCATGTCCAATAAATCATGTTTTCTTTCAGCTAATATGCTACTAAAGAAACTTCTTCAACTACACAACTTTTGGAGACCACAATATTCCTCTTTTACCTCAAAAGATTTATAGGTCATCAACCTACAAAATGTTGGATGTTGGCACATTGTTTCCTATGTCCCTAATTTGATTATGATGGAATACTTGACACAAGTGATGCAACATTTAATTCATTAAATCTACCTATCAACAAAATCGAAAGTATTGTTCGACAAAATTTAGTAAAACCAACATTCACTACCGAAAAGGAAAGACCACGCAACACGGTTAACACCTTTTTGGTCTAATTTTCACATAACACGTGTCACCAATGGTTTACGCATTAAAAATTTAAAGAAATCAGAACTTCACCTTATTTATTAATTATATTTTCCTATTTCTTTGTAGTATTTGTAGTATACAACTTATCTATTGATTATGTTTCCTATTTCTTTGTAGCTGTAATTAGCAATAAGGAGGTTATTCCTCCATTCACATTTTAGTAGTAGTACGAAGTTATTTCCTTGTTATTAGGTGGGCCGTGGGTGGTTAATCTACTAATGTGCATTTAAAGTTATTTGAATTCAATGAAAAGATAAGCAAAAAATTGTTCTAGTTTTTGAGTACTTTAACTCAAGAGATTGCAGGTTCAAATGAACACCATAGGTCGTATTAAAGGAAACATTTGATTTCATCTTGTAGTGTCCCATAACTAGGTCCATATTAGGGGACCGTAACAAGTTGGTATTAGAAACGGGAGTTGTGGGAAATCTGATACAAAAATAACTATGCCAACTGTTGACTTTATTCTGAGAAGAACGTGACCAATTTAGCAAGACAATAAGCTATAAATGCTCGCTTTGATGCACTTCAACATAAAATGGTAGTCAGAACCGAGGTTGAAAAGGTAAAGCAGTGGCTACGGGATCAGGGTAAAAACTAGTGAGAATTCCATGATTCCTAAATATACAAAGTTGAATTTTCCACGATCTTGTGGATATGAGGACTCCTTGGGATGGTTGAACATGTGCGAGCATTACTTTCAACACAGGCAAACACCAAAAAAAGGAAAAAAAGGGTCTTGCTTCTTTCGGAAGGAATTGCACAACTCTAGTTTCTTCAACTAGTGAAAGATATGCCTCAATGATATTGGGATGAGTTCAAATGTCAATATTCATTTTGGACCGCCAATCAAAAGTCAAAAGTTGGAAGAATTGGCCAAGTTACGTCAAATTAGATATGTCCAAGAAAGGTTTGAACAATTGGTTTCGTGGGGTAGTACCCTTATACAAGCACAGAAAAGGGTCTTGCTTCCTTTCATTTGGTGGAAATTGCACAACTCTAGTTTCTTCAACTAGTAAAAGATATGCCTCAACTTTTGACTTCTAATTTGACGTTCATTTTGGACCGCCAATTAGAAGTCAAAAGTTAGAAGAATTGGCCAAGTTATGTCACATTGGATCTGTCCAAGAGGTTTGAACAATTGGTTTCGTGGGTTAGTACCCTTGTACAAGCACAAAATAGATGGAATTTTGCATAAATGGTCTTGCTGATTACATGAGGTCAACTAGTTCTTAGATTGATTGAACTCAACATAGTTAGAGATTAAAGGACATAGCCTTTCTTATTATTGCTTGGGTGGAATCAGTTGACAAAAAACTCGAACGTAATTGACTTCTTTCTAATTTAAATAAAGAAAGAGTTGATTTGGAGAAGAACTTGATCCTCTCCTAGCAGTGAAGTGTCATATCCTAGAGTGAGGGCTTTACCGGTCGTTAAGATAGAGTTGGTGCCGGTAGTTGTTCTTGCAAAATTGAGGGAGAGTTGCATAATCCTCCAGATTTGGCTATAGCGGTGAATATTTCCCGACTTTATGAATGCAAGGAACAACCTCTTTGTTTGCAATCATTAGATGCTTGTAGAACAAAGACAACAAATTTCTCACCTCAACAACCACCAGATTTGAAAAACTAACCAAATTTAAAATGGAGGAAAGGTGACTTAAGGGACTCTATTTCAACTGTGACGAATTATTCACTCTGAGCCATAAGTGAAAGGAATTATTTTTGATTGGTTCCATTGATGATGGGGAAGAATTTGCTGGAAAAGAAAGAAATTCTAGTACTTCCCACATTTTGCTCGAGGACAAGTGCAATTTGAAGGAGGGTAGTAATGTTAGAACCCTTTTAGTCTGCTACCAGTTTACGCATGGAAACTTTAAAGAAATCAGAAAGTAGATTACTTAAGCTTATCTATTAATTATGTTTTCCTATTTCTTTGTAGCAGTTATAAGCAGTAATAGGAGGTTATTCCTCCTCTTTATAATTTCAATAATAGTGCGAAGTTATTTCCTTGCTATCAAGTGGGTGGATAATCTACCATTATGTTATTTAAAGTAATTTGAATTTCAGTGAAAAGATAAGCAGAAAATTATTCCAGTTTTTGAGTACTTTAACTCGAGAGATTGCAGGTTCTCTCTTAACGAACCAACAACATAGGTTGTATCATGCAGTGCCCCATAACTTAGATCCATATTAGGGGACCATAACAACCCACATTGTTCTGACTCCGTATTGGTCTATCTTTCTTCCATTGAACAAGGCATCTGTGATTTCCCTTCTTTGCATGGAGGCATTTCTCACATTCATTGTCAGAATCTGAGACTCTGATATTGTATTAACTGTTCCGTTCTTTCATTCAATACTTTAGCTTCTATCTTGCCCATTAATGATGATAGCATCACTTATTTCTGTATATCTATTGTTCAACCCATTTATTTTACATTTTTTATGAGAATCTTATTTGTCTGTGTGGGTAGCATCCTCTTGTTGCTTTCTTTGAATATGATTTTACAGATACTAAAATGATGCAGTTGTAGGGTGATGTTGTTATTCATTTACTTGTTTATTAAAATATCTTACTAACTAGATTCGGTTAAATGTCAGTTCTACTTGGGTTGTGGCACAAAATAAGTCTTTCCTCCTAATAATAGTTACGAGTTTCCCTATCCGCAAAAAGATTTACTTGTTTTAATGCTTATTTCACTCCTCATCTATTTACATGGAAGGCATTATGACCAGCAGTTTTGACAGGGTTGTCTCATTTGTAAAGCTTGTGTTCATTGTAGTACCAAGTTATTGCTTTGGTTTGCACCCAAGTGTTTAATAAAGTTGGTGCAAACCTTAGAGACAGATGTTAAATCCCAGTTGAGACATAAATTACTAACAGATTTCATCACGTTTGCCTATCCTATGCTTTGATGGGCAGAGTTACCGATGGAATAGCCGAGCTACGCAGTAGCTGACTCAGACACTGCCATTTCAAAGAAAGAAAACAAAATTATTGGTTTTACACTTTCTTAACTGTTTCTTCTGTGTTGTCATTTTATATGCATAGACAAAAATGTGTTATTGATTTCAGGGTGCTTTTGGCTTGGTTGCTATTTCTTTGTTAAATGTATACTACTTGTATATCTATAGTGTGCGCTAGTAGTCTGCTAAATTACTTTGTTTGGGGATTAAGTTGATAAATAAGATTTGAAACTCCTGAGAACCCCATTTGATCAGGAAGAGCTACTCATGTGAAACAGTTGCACTCTGACTCATTTATTTACTGAGCTGTAGTGGGATTGTGCATATTCCAAATTCTGTACTAAAAACAGTCGGAACATGGTGGATATTAGCTGAGCCATAAGTTATATATTATTTGCTTATCAAGAATTCATCATTATCTTCTCCTGATGTTGTTAAGTAGTTTTCTTTCCTTGGGAGCTTTGCCTATTGATTTCCTTTTCCATCTCTCAAGTAGTTCCATGTCTTTCTTAGTTTTTGGTTTTTATTTCTTTTCAATGTGTACTCTCCATTTTAGCAGCCAGCCCAATAAAAGACTAGGAATATAAAAGGAGAATGATGGAGATATTTCAATAACTAATGTCCATTTTTTCTGTTTTTGTACATCAGTTTCTGCCTAAGAAAGGAGGGACGCCAAAGAAAAATGAGATCGTGTTTACTGCACCAACAGGGGAGGAGATTACTACAAAGAAACAGTTGCAGCAGTACCTGAAGTCTCACCCTGGTGGTCCTGCAATCACTGAGTTTGACTGGGGAAGTGGGGAAGCTCCAAGAAGATCCACAAGGATCACTGGAAAGGCAAAGACAGCTCCACTTGCAGCAGAAAGTGTGACTCCAACAAAGCGAAACAGAAAATCTTCAGCTTCTAAGAAGGACGTGAAAGACAAAAAAGAACAGGAAGAAACTGAGGCAGCAAAGGATGTTGACATGCCAGAAGCTGACAAACAGGAAAAGGATGGTGTGTCTGTGGAAGCTGAAAAACATGAAAAGGATGCTGTGGCTGTGGAAGCTGGAAAACATGAAAAGGATGCTG</genome_strand>
        <mrna_strand>TGTGGGGGGGCGGGGAGAGAAAAATGTCGAGCTCTGTGGAGACGAATGAAGTTGTTTCCATTGAGCTTCCAGCTCCAAATGGCTGGTTGAAAAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................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      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0078D19-pLPJK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E245980" ref_strand="+" ref_description="SGN-E245980 [cLEF-51-O16]">
      <seq>taaatgagtcagtttgtttttgtgtatagagagagcgtttttcattttttcagaaaaattgagttaggtgaggagaaggaaggaagacgaagagagaaaaatgtcgagctctgtggagatgaatgaagttgtttccattgagcttccagctccaaatggctggttgaaaaggtttctgcctaagaaaggagggacgccaaagaaaaatgagatcgtgtttactgcaccaacaggggaggagattactacaaagaaacagttgcagcagtacctgaagtctcaccctggtggtcctgcaatcactgagtttgactggggaagtggggaagctccaagaagatccacaaggatcactggaaaaggcaaagacagctccacttgcagcagaaagtgtgactccaacaaagcgaaacagaagatcttcagcttctaagaaagacgtgaaagacaaaaaagaacaggaagaaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0078D19-pLPJK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0078D19.1" temp_strand="-" temp_description="C07HBa0078D19.1  AC234404.1 htgs_phase:2 submitted_to_sgn_as:gi|222136704|gb|AC234404.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0078D19, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="23585" stop="13126"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23285" g_stop="23114" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="172" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23113" i_stop="13723" i_length="9391">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13722" g_stop="13426" g_length="297"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="470" r_length="298" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0078D19.1" gen_strand="-" ref_id="SGN-E245980" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>469</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0078D19.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E245980" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23285" e_stop="23114"/>
          <exon e_start="13722" e_stop="13426"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAATGAGTCAGTTTGTTTTTGTGTATAGAGAGAGCGTTTTTCATTTTTTCAGAAAAATTGAGTTAGGTGAGGAGAAGGAAGGAAGACGAAGAGAGAAAAATGTCGAGCTCTGTGGAGATGAATGAAGTTGTTTCCATTGAGCTTCCAGCTCCAAATGGCTGGTTGAAAAGGGTATGTTTTTTTTTTCTCTTCTTTCTGTTCTGTTTTTTTCATTTTTATTGTTATTGTTTCAGTTTTTTTTTTTGGTTAATTTTTCTGTTGTTTTCTGTGTTTGGCATTGAAATTTGATGATTTTATGAAAAGGGTTTTGTGGGTTTGTTCTAATTTGTTGTTTTTTCTTCAGGTTGGAATTTTTTAAATTATAGTTTTATGTTATTTTAGGTGTTAAAGCATCAAATTCCCCTTTGTTCTGAAAAGGGTTTTGATTAAGTTTGTGTGGTTATGTAGCCTGTTGTGTTTTTTGAGTGTTCATGTGATAGTTTTGTTGATGAGAAGGATTGTTAACTGGGTTGTCTGGTCTTGTTAAATGTAGATTTTTGTGCTGCAATTGTTGTGAATTTAGGAAATGGGGATATCTTTGTTTAGAGATTTTCCTACTTCTGGAAGATTGAGTTAGGATGGAGTATGAGAAGTTTTGATTGTCACTAACTTCATGATTCAGCTGAATTCACAGAAGTTTTTGGGGGTTGTGTGTTGTTTAGGGATGGCAAATGGGGGCAAACCTGCATAAACCCGCAAAGAATTCGACCCGCCCCACCTAGCAAAATTTGTTTTTTTCTCAACACGCCTCCACCTAGCAAAATTTGTTGTTATTCAAACCGCCTCGCCTAGCTAAAGTTGCTGTTTTTCAACATATCTTGCGTAGCAAAATTTGTTGTTTTTCAACTCGTCTAGCCTGTCCTAATTTGTTGTTTTTCAACTCGCCTCACCTAGGAAAATTTGTTGTTTTTCAACCCACCCCACATGAATTGTTTTCTCCTACTTTCTTCATAACAATGTTTATTACAGTCTAGACTTATGTTCAAAACACAAATGTTTTGATCTAAAATAGACCCAAATTGTAAAAAATAAAGTATTTTTTTTCTCATATCAGAAATGCTATGAAGAAGTCAGCCTCTGTATACTTTTCATTTCTTTTCTTTTCCTTTTGTGGATAGTAAAATTGGATAAAGAAAATCATTTAAACAAAATGTTAATGCAAAATGAATCCAGACCCCTTGCATTGTTTGGTGCCACAAAAATCCAAACTTGCACTAGCAGATCCAGGTTAAGTTTAACACTTCAACTAGCAGATAATTTGGACAGACTTATGTAGAACTGGATCATTAAATAAATGCAAAACTCATTTTTCAAGTTTTTTTTTAATAATAAAACAGTTGTAATTAGGATTTAAAGACAATCCAAAAAGAGATTGTATAAGCATCCGATTCAAGAGGTTGAGTACAAGATTCATGGTGTAATCAAACTTAAAACTTATGAAAGGAAGAAAGCTGAATCCCATCCGCCCCGCAAGCCACAAAAATATCTTTTTTCTTAAACTTAACCACCCACACAACTCCAAACATGTTCGTCCCTGCAAAGGGTCAAACCCGCACCACTCTGCCCCACTGCCACTCCTGATTGTTTTGTCTGTTATAAGTAAAGATTTCCTTTTTAAAATTGTAAAGAGAGTGCTATTTAGCGTTAACGGTATATAAGACTACTAGACAGCTCAAGCTTAAAAACTCTAACTTGCCTACCAGTTGACCACCATAACCAATGAAGACAGTCCCTAACCAAAGGGGACTGAATCAACTGGTAGACAAGTTAGAGTGTTAAAGCTTGAGTTGTCTAGTAGTCCTACATATCTTTTTACAAGTTGGGGTAGGGGGCTTCCCTGTGAGGGGGGGGGGGATAAAGTGGTATTAAGAGAAATAACCTAGCCTTTTAAACCAAAAATTGGAAGTGAAAAAACTTCAGTCCTGACTTATTAATTGGCTTTGAAAATCATGGCTTCAGGGAAGTGAAGTTTCTTAAGAGTGGAATCTAAAGAACTACCTGTCTGACGGTTTCAAGATGTACCAGAAATGATCCTTTTGTAATTTAAGTTTGTATTTAAGTACTCAATCTGCAACTTTTCTTGATGGAGGATAATGTGCTGGTTCTTTCTATTTTTCAGATCCTGCAATTTAATTAAAGTTGAGACTTTGTTTACAAAAAGGACTTCTCAAGTCCTTTTATTAGTATCTAAAAAGATGAATAAGCTAATTCACATATCAAAATAGACTCTAACTGTTATGATTCTAATTAAAGGAAACAGGACCGCCTGATTCACTTTCAGAAGTTCTGTCTTTTATACGAAACTGTCAACTTGTACTTGGATAGGCTCAAGCTTATTGAAACTTGCTTTTGGTTGAGTTTAAGCTTTGGACATGAATATTAAACCAAAATGCTCCAAAGCTAATTGTCTTATTGCATCTAATTATAATAACATATTTCCTTCTCGTCAAACGGCGGATAGCTTTTTGGTAAGGACCGTTCACCTCCAACCATAATGATTGGTGGTTTGAGTCAGCACGGTAGCAAAAGTGGGAAAGGATCATGTTGGGCAGCTTGGTTTAGGGGTCTGGGAGGTGAGTTAACCATGAAAAACTATATGTATTTTCATGGTTTACTAAGTTAGTAGATTCATTGCGGGTACTTATCCAATACGTGTGTGGAAGTATCAGATAGGAGTATGTCAAACTTTTTGCTATAAGTTTAGCATATGTTGAAGAAAGTTTTGAGTCCCTTGCTTCGTCTCTATTTTGTGGGATCTCATTGTTAAAGGATTCTCCACATTCACCTCTGCCGTCACCCTCCTCCATCAAGAATTTATGCACATTTAGTTGTGCTCCAGAACTAGGCTCAAAAACTCTTGAGGCAATTGGAGCTAAATTAAAGCTTGCTACTTGTTAGATTTTGTGCAGGATGGCCAACTTAATGATACATGAACTTGGATGTTCTTCGATCGAATATATGTTTAAATTTTGGCACTTTTTAAGTGTGTCATCAGATATCATAATGAGGTACCAATACAAATGTTGCATCCCTTTTTGACACTTTCTGTAAAGAGGCAAGATGAGAAGTCCATGGAACACTGGTTCAGCTTGGCTCAATTAGGACTAGTTTCACCATATGGGGTCGTATGGTTTGTGAACAAGTTATATAGGGTTTATCATGTGGGATTAATGCCGCTTCAGGATTTTCTCAACTGGCAAAAATTGAGGGACTTGTGTCTTAGGTCACAAGTTTCAGCTTTATGCCAAGTGAACTTGATGTCGCTATTGGCTTTGGGCCAGCACTGTTGCTGCTTGTAGTTCAGCATTCGATATCGTCAAGACTCCTACAAAAATTGCAGCCAGACGCTGAAAGAAAATTCCCGTACTCTGATTCTTTCGGCTACTCCATGAAAATATTTAAGGCAGGAGGACTTCTCGAACTCTACAATGGATTTCCTGCACATTGGATTCAGTTCTCCCTTGTGTGATGATGACTCTAATTTTCCTTAAACAAATTCAGGAGGTGGAGACGAAAATTGGAACGGTCAACAGCCGCATCCACTCCAGTTTAGTCTCTATATTTTGAGCAGTCGCCTTATTGTCGTGGTGTTGTTTTCTTAGTTTATGTAAATTCATGCCTTCGAAGTGGCTAGGTACACTTCAAGATTTTTTTTCCGGAAAAACCCTACTTCATTGTGAATATTCTTTTAAGGTTGTACTTTATGTACTATTCATGTTGCAGTAGATATTTGGAGCTACATCAATTTGGTATGTCTTTCTCTTTCTTGAGCTCAAACTAGTTACTAAGACCTTTGTTTTGTGAGTACCTCTCATTCTCCTCCACCCCACACACACGTGCAAAAAGAAAGAAAAGAGAAGAAGGAACTAAGAAGTCTGATGAAAGCAACTTTCTTTAAGGCTTGTGGACAATGATTAACACACAAATCCTGGAAAAAGCTGGATTGACAACCTTGAAAACCAAGGATTGAATCTTAAACGTTGGTGAAGGTACCAAGTACATATGCAGTTAGGAGGTTGCAAGTACATGATAGGTTCTCACTTGGATCCTTTCTTTTAGGACAACTGTGGTGTCGGGGCTAGCTTGATGCACCTCGACTAATTCCACGGGATACCTGACACCTCCCATCAACAACTGGTATAAGGTAACTATCTACCAAGACTAGGACAATTCGGGAAAAAATCACCTAGTTTGTTGTCTATATTAGGTTTCAACCTCAGAACTCATTGTTCTCCATTCACTTCATTGACCACTGCCACATTATTGGGTGCTCCCTAGACTCTTTTGGTAGCACACACATAAGATCAGTGTTATTATAGGTTAAATGCAAATAAAAGAGAGTTTATTCGAGGTTTTAAGCGATAACACAAATAAAGAACGAATTTAACGAAGAACGATGAATGAAGAAAAAATAAATATGCTAAGCGATTGAAATTTTAAGTCACGGACTTGATTTCCTGTTAGTGGACTTGAAGCTCAAACTTCGTATCAATGCACCAACAGGTGATAAGTCGTCCACTGCAAGAAAGGGAATATCATGACTTGTTACTGCATTAATACCTATTCAAAGTTTAAGCTTTGAAGTCCATAAACCTCATTCGAGTGAAATGGGATACATCCATGCTTCTCAACTTTCATGATTGGAGAATCATGATTTGGGATAGCTCTCTACCCTTTATGGTCATAGAATTATCTCTTGAAGACCTCCCATTTGTCACCTATCTTGCAATTATCACTGTTAGTCCCATTTTCTATAATAATGCAGTGTATCAAGAAAATATCTTTTTAAATAATGTTTTGTATCCATGCATTTCGTCACATTTTATTTTCTTCCTATTACCAACCTCCTATTTTACTAGATTTGTAAATCCACCCATAGCATCTTGATATTCTTCCATAAAGCTACATATTGAGATGAATTAGTCTTGGCTTTTCGTGTCATACTTAGCTTTGATAACCAACAACAACATACCCTGTGTAACCCCACAAGTGAAGTATGGGGAAGGTAAGATGTACGCAGAGAAGGGTTACAAGAATTAAAAAAAATAACAACAACATATCTAGATAAAAAATAAAATGAAGCAACATATTGTAGAAGCACATAGAAGAATAAGAAACTACATGATTGCTAATTACTACTACTATAATAAGGAGAAGAGGATATTGAGCAAGGCCCCTGCCTCCCCCAGTCCTTTTGGAGCTAGCATAGCTGATGATATGGTATAGCCCTTCTCTAGCCTAGTCTAGGGACCACACTCATCTACGTACTAATCTTCTACTTTAATCCTCATCCTTCTTGCCTTCCTATTTAGGATTTTGTCGGTAGGCGATTGAAGTTGTGTCATGTCTTGTCTAATTACCTCTTCTGGGTTCTTTTTCGGTCTACCTCTACCTCTCCTTACTCTTGCTACAACGAACTTCTCACACCTTCCAATGGGCGCATCCGCGTACCTCTTATTCACATGCTTGAACTATCTCAGGCTTTCTTTTCTATAAATCAAGTTCCTATTAAATTTTGTTGCAACTTAAAACCATAAACGATTATCATGTCCAATAAATCATGTTTTCTTTCAGCTAATATGCTACTAAAGAAACTTCTTCAACTACACAACTTTTGGAGACCACAATATTCCTCTTTTACCTCAAAAGATTTATAGGTCATCAACCTACAAAATGTTGGATGTTGGCACATTGTTTCCTATGTCCCTAATTTGATTATGATGGAATACTTGACACAAGTGATGCAACATTTAATTCATTAAATCTACCTATCAACAAAATCGAAAGTATTGTTCGACAAAATTTAGTAAAACCAACATTCACTACCGAAAAGGAAAGACCACGCAACACGGTTAACACCTTTTTGGTCTAATTTTCACATAACACGTGTCACCAATGGTTTACGCATTAAAAATTTAAAGAAATCAGAACTTCACCTTATTTATTAATTATATTTTCCTATTTCTTTGTAGTATTTGTAGTATACAACTTATCTATTGATTATGTTTCCTATTTCTTTGTAGCTGTAATTAGCAATAAGGAGGTTATTCCTCCATTCACATTTTAGTAGTAGTACGAAGTTATTTCCTTGTTATTAGGTGGGCCGTGGGTGGTTAATCTACTAATGTGCATTTAAAGTTATTTGAATTCAATGAAAAGATAAGCAAAAAATTGTTCTAGTTTTTGAGTACTTTAACTCAAGAGATTGCAGGTTCAAATGAACACCATAGGTCGTATTAAAGGAAACATTTGATTTCATCTTGTAGTGTCCCATAACTAGGTCCATATTAGGGGACCGTAACAAGTTGGTATTAGAAACGGGAGTTGTGGGAAATCTGATACAAAAATAACTATGCCAACTGTTGACTTTATTCTGAGAAGAACGTGACCAATTTAGCAAGACAATAAGCTATAAATGCTCGCTTTGATGCACTTCAACATAAAATGGTAGTCAGAACCGAGGTTGAAAAGGTAAAGCAGTGGCTACGGGATCAGGGTAAAAACTAGTGAGAATTCCATGATTCCTAAATATACAAAGTTGAATTTTCCACGATCTTGTGGATATGAGGACTCCTTGGGATGGTTGAACATGTGCGAGCATTACTTTCAACACAGGCAAACACCAAAAAAAGGAAAAAAAGGGTCTTGCTTCTTTCGGAAGGAATTGCACAACTCTAGTTTCTTCAACTAGTGAAAGATATGCCTCAATGATATTGGGATGAGTTCAAATGTCAATATTCATTTTGGACCGCCAATCAAAAGTCAAAAGTTGGAAGAATTGGCCAAGTTACGTCAAATTAGATATGTCCAAGAAAGGTTTGAACAATTGGTTTCGTGGGGTAGTACCCTTATACAAGCACAGAAAAGGGTCTTGCTTCCTTTCATTTGGTGGAAATTGCACAACTCTAGTTTCTTCAACTAGTAAAAGATATGCCTCAACTTTTGACTTCTAATTTGACGTTCATTTTGGACCGCCAATTAGAAGTCAAAAGTTAGAAGAATTGGCCAAGTTATGTCACATTGGATCTGTCCAAGAGGTTTGAACAATTGGTTTCGTGGGTTAGTACCCTTGTACAAGCACAAAATAGATGGAATTTTGCATAAATGGTCTTGCTGATTACATGAGGTCAACTAGTTCTTAGATTGATTGAACTCAACATAGTTAGAGATTAAAGGACATAGCCTTTCTTATTATTGCTTGGGTGGAATCAGTTGACAAAAAACTCGAACGTAATTGACTTCTTTCTAATTTAAATAAAGAAAGAGTTGATTTGGAGAAGAACTTGATCCTCTCCTAGCAGTGAAGTGTCATATCCTAGAGTGAGGGCTTTACCGGTCGTTAAGATAGAGTTGGTGCCGGTAGTTGTTCTTGCAAAATTGAGGGAGAGTTGCATAATCCTCCAGATTTGGCTATAGCGGTGAATATTTCCCGACTTTATGAATGCAAGGAACAACCTCTTTGTTTGCAATCATTAGATGCTTGTAGAACAAAGACAACAAATTTCTCACCTCAACAACCACCAGATTTGAAAAACTAACCAAATTTAAAATGGAGGAAAGGTGACTTAAGGGACTCTATTTCAACTGTGACGAATTATTCACTCTGAGCCATAAGTGAAAGGAATTATTTTTGATTGGTTCCATTGATGATGGGGAAGAATTTGCTGGAAAAGAAAGAAATTCTAGTACTTCCCACATTTTGCTCGAGGACAAGTGCAATTTGAAGGAGGGTAGTAATGTTAGAACCCTTTTAGTCTGCTACCAGTTTACGCATGGAAACTTTAAAGAAATCAGAAAGTAGATTACTTAAGCTTATCTATTAATTATGTTTTCCTATTTCTTTGTAGCAGTTATAAGCAGTAATAGGAGGTTATTCCTCCTCTTTATAATTTCAATAATAGTGCGAAGTTATTTCCTTGCTATCAAGTGGGTGGATAATCTACCATTATGTTATTTAAAGTAATTTGAATTTCAGTGAAAAGATAAGCAGAAAATTATTCCAGTTTTTGAGTACTTTAACTCGAGAGATTGCAGGTTCTCTCTTAACGAACCAACAACATAGGTTGTATCATGCAGTGCCCCATAACTTAGATCCATATTAGGGGACCATAACAACCCACATTGTTCTGACTCCGTATTGGTCTATCTTTCTTCCATTGAACAAGGCATCTGTGATTTCCCTTCTTTGCATGGAGGCATTTCTCACATTCATTGTCAGAATCTGAGACTCTGATATTGTATTAACTGTTCCGTTCTTTCATTCAATACTTTAGCTTCTATCTTGCCCATTAATGATGATAGCATCACTTATTTCTGTATATCTATTGTTCAACCCATTTATTTTACATTTTTTATGAGAATCTTATTTGTCTGTGTGGGTAGCATCCTCTTGTTGCTTTCTTTGAATATGATTTTACAGATACTAAAATGATGCAGTTGTAGGGTGATGTTGTTATTCATTTACTTGTTTATTAAAATATCTTACTAACTAGATTCGGTTAAATGTCAGTTCTACTTGGGTTGTGGCACAAAATAAGTCTTTCCTCCTAATAATAGTTACGAGTTTCCCTATCCGCAAAAAGATTTACTTGTTTTAATGCTTATTTCACTCCTCATCTATTTACATGGAAGGCATTATGACCAGCAGTTTTGACAGGGTTGTCTCATTTGTAAAGCTTGTGTTCATTGTAGTACCAAGTTATTGCTTTGGTTTGCACCCAAGTGTTTAATAAAGTTGGTGCAAACCTTAGAGACAGATGTTAAATCCCAGTTGAGACATAAATTACTAACAGATTTCATCACGTTTGCCTATCCTATGCTTTGATGGGCAGAGTTACCGATGGAATAGCCGAGCTACGCAGTAGCTGACTCAGACACTGCCATTTCAAAGAAAGAAAACAAAATTATTGGTTTTACACTTTCTTAACTGTTTCTTCTGTGTTGTCATTTTATATGCATAGACAAAAATGTGTTATTGATTTCAGGGTGCTTTTGGCTTGGTTGCTATTTCTTTGTTAAATGTATACTACTTGTATATCTATAGTGTGCGCTAGTAGTCTGCTAAATTACTTTGTTTGGGGATTAAGTTGATAAATAAGATTTGAAACTCCTGAGAACCCCATTTGATCAGGAAGAGCTACTCATGTGAAACAGTTGCACTCTGACTCATTTATTTACTGAGCTGTAGTGGGATTGTGCATATTCCAAATTCTGTACTAAAAACAGTCGGAACATGGTGGATATTAGCTGAGCCATAAGTTATATATTATTTGCTTATCAAGAATTCATCATTATCTTCTCCTGATGTTGTTAAGTAGTTTTCTTTCCTTGGGAGCTTTGCCTATTGATTTCCTTTTCCATCTCTCAAGTAGTTCCATGTCTTTCTTAGTTTTTGGTTTTTATTTCTTTTCAATGTGTACTCTCCATTTTAGCAGCCAGCCCAATAAAAGACTAGGAATATAAAAGGAGAATGATGGAGATATTTCAATAACTAATGTCCATTTTTTCTGTTTTTGTACATCAGTTTCTGCCTAAGAAAGGAGGGACGCCAAAGAAAAATGAGATCGTGTTTACTGCACCAACAGGGGAGGAGATTACTACAAAGAAACAGTTGCAGCAGTACCTGAAGTCTCACCCTGGTGGTCCTGCAATCACTGAGTTTGACTGGGGAAGTGGGGAAGCTCCAAGAAGATCCACAAGGATCACTGG-AAAGGCAAAGACAGCTCCACTTGCAGCAGAAAGTGTGACTCCAACAAAGCGAAACAGAAAATCTTCAGCTTCTAAGAAGGACGTGAAAGACAAAAAAGAACAGGAAGAAACT</genome_strand>
        <mrna_strand>TAAATGAGTCAGTTTGTTTTTGTGTATAGAGAGAGCGTTTTTCATTTTTTCAGAAAAATTGAGTTAGGTGAGGAGAAGGAAGGAAGACGAAGAGAGAAAAATGTCGAGCTCTGTGGAGATGAATGAAGTTGTTTCCATTGAGCTTCCAGCTCCAAATGGCTGGTTGAAAAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTGCCTAAGAAAGGAGGGACGCCAAAGAAAAATGAGATCGTGTTTACTGCACCAACAGGGGAGGAGATTACTACAAAGAAACAGTTGCAGCAGTACCTGAAGTCTCACCCTGGTGGTCCTGCAATCACTGAGTTTGACTGGGGAAGTGGGGAAGCTCCAAGAAGATCCACAAGGATCACTGGAAAAGGCAAAGACAGCTCCACTTGCAGCAGAAAGTGTGACTCCAACAAAGCGAAACAGAAGATCTTCAGCTTCTAAGAAAGACGTGAAAGACAAAAAAGAACAGGAAGAAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0078D19-pLPJK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E269840" ref_strand="+" ref_description="SGN-E269840 [cLEM-17-K6]">
      <seq>ttttttcagaaaaattgagttaggtgaggagaaggaaggaagacgaagagagaaaaatgtcgagctctgtggagatgaatgaagttgtttccattgagcttccagctccaaatggctggttgaaaaggtttctgcctaagaaaggagggacgccaaagaaaaatgagatcgtgtttactgcaccaacaggggaggagattactacaaagaaacagttgcagcagtacctgaagtctcaccctggtggtcctgcaatcactgagtttgactggggaagtggggaagctccaagaagatccacaaggatcactggaaaggcaaagacagctccacttgcagcagaaagtgtgactccaacaaagcgaaacagaagatcttcagcttctaagaaggacgtgaaagacaaaaaagaacaggaagaaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0078D19-pLPJK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0078D19.1" temp_strand="-" temp_description="C07HBa0078D19.1  AC234404.1 htgs_phase:2 submitted_to_sgn_as:gi|222136704|gb|AC234404.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0078D19, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="23541" stop="13126"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23241" g_stop="23114" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="128" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23113" i_stop="13723" i_length="9391">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13722" g_stop="13426" g_length="297"/>
          <reference_exon_boundary r_type="cDNA" r_start="129" r_stop="425" r_length="297" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0078D19.1" gen_strand="-" ref_id="SGN-E269840" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>425</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0078D19.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E269840" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23241" e_stop="23114"/>
          <exon e_start="13722" e_stop="13426"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTTCAGAAAAATTGAGTTAGGTGAGGAGAAGGAAGGAAGACGAAGAGAGAAAAATGTCGAGCTCTGTGGAGATGAATGAAGTTGTTTCCATTGAGCTTCCAGCTCCAAATGGCTGGTTGAAAAGGGTATGTTTTTTTTTTCTCTTCTTTCTGTTCTGTTTTTTTCATTTTTATTGTTATTGTTTCAGTTTTTTTTTTTGGTTAATTTTTCTGTTGTTTTCTGTGTTTGGCATTGAAATTTGATGATTTTATGAAAAGGGTTTTGTGGGTTTGTTCTAATTTGTTGTTTTTTCTTCAGGTTGGAATTTTTTAAATTATAGTTTTATGTTATTTTAGGTGTTAAAGCATCAAATTCCCCTTTGTTCTGAAAAGGGTTTTGATTAAGTTTGTGTGGTTATGTAGCCTGTTGTGTTTTTTGAGTGTTCATGTGATAGTTTTGTTGATGAGAAGGATTGTTAACTGGGTTGTCTGGTCTTGTTAAATGTAGATTTTTGTGCTGCAATTGTTGTGAATTTAGGAAATGGGGATATCTTTGTTTAGAGATTTTCCTACTTCTGGAAGATTGAGTTAGGATGGAGTATGAGAAGTTTTGATTGTCACTAACTTCATGATTCAGCTGAATTCACAGAAGTTTTTGGGGGTTGTGTGTTGTTTAGGGATGGCAAATGGGGGCAAACCTGCATAAACCCGCAAAGAATTCGACCCGCCCCACCTAGCAAAATTTGTTTTTTTCTCAACACGCCTCCACCTAGCAAAATTTGTTGTTATTCAAACCGCCTCGCCTAGCTAAAGTTGCTGTTTTTCAACATATCTTGCGTAGCAAAATTTGTTGTTTTTCAACTCGTCTAGCCTGTCCTAATTTGTTGTTTTTCAACTCGCCTCACCTAGGAAAATTTGTTGTTTTTCAACCCACCCCACATGAATTGTTTTCTCCTACTTTCTTCATAACAATGTTTATTACAGTCTAGACTTATGTTCAAAACACAAATGTTTTGATCTAAAATAGACCCAAATTGTAAAAAATAAAGTATTTTTTTTCTCATATCAGAAATGCTATGAAGAAGTCAGCCTCTGTATACTTTTCATTTCTTTTCTTTTCCTTTTGTGGATAGTAAAATTGGATAAAGAAAATCATTTAAACAAAATGTTAATGCAAAATGAATCCAGACCCCTTGCATTGTTTGGTGCCACAAAAATCCAAACTTGCACTAGCAGATCCAGGTTAAGTTTAACACTTCAACTAGCAGATAATTTGGACAGACTTATGTAGAACTGGATCATTAAATAAATGCAAAACTCATTTTTCAAGTTTTTTTTTAATAATAAAACAGTTGTAATTAGGATTTAAAGACAATCCAAAAAGAGATTGTATAAGCATCCGATTCAAGAGGTTGAGTACAAGATTCATGGTGTAATCAAACTTAAAACTTATGAAAGGAAGAAAGCTGAATCCCATCCGCCCCGCAAGCCACAAAAATATCTTTTTTCTTAAACTTAACCACCCACACAACTCCAAACATGTTCGTCCCTGCAAAGGGTCAAACCCGCACCACTCTGCCCCACTGCCACTCCTGATTGTTTTGTCTGTTATAAGTAAAGATTTCCTTTTTAAAATTGTAAAGAGAGTGCTATTTAGCGTTAACGGTATATAAGACTACTAGACAGCTCAAGCTTAAAAACTCTAACTTGCCTACCAGTTGACCACCATAACCAATGAAGACAGTCCCTAACCAAAGGGGACTGAATCAACTGGTAGACAAGTTAGAGTGTTAAAGCTTGAGTTGTCTAGTAGTCCTACATATCTTTTTACAAGTTGGGGTAGGGGGCTTCCCTGTGAGGGGGGGGGGGATAAAGTGGTATTAAGAGAAATAACCTAGCCTTTTAAACCAAAAATTGGAAGTGAAAAAACTTCAGTCCTGACTTATTAATTGGCTTTGAAAATCATGGCTTCAGGGAAGTGAAGTTTCTTAAGAGTGGAATCTAAAGAACTACCTGTCTGACGGTTTCAAGATGTACCAGAAATGATCCTTTTGTAATTTAAGTTTGTATTTAAGTACTCAATCTGCAACTTTTCTTGATGGAGGATAATGTGCTGGTTCTTTCTATTTTTCAGATCCTGCAATTTAATTAAAGTTGAGACTTTGTTTACAAAAAGGACTTCTCAAGTCCTTTTATTAGTATCTAAAAAGATGAATAAGCTAATTCACATATCAAAATAGACTCTAACTGTTATGATTCTAATTAAAGGAAACAGGACCGCCTGATTCACTTTCAGAAGTTCTGTCTTTTATACGAAACTGTCAACTTGTACTTGGATAGGCTCAAGCTTATTGAAACTTGCTTTTGGTTGAGTTTAAGCTTTGGACATGAATATTAAACCAAAATGCTCCAAAGCTAATTGTCTTATTGCATCTAATTATAATAACATATTTCCTTCTCGTCAAACGGCGGATAGCTTTTTGGTAAGGACCGTTCACCTCCAACCATAATGATTGGTGGTTTGAGTCAGCACGGTAGCAAAAGTGGGAAAGGATCATGTTGGGCAGCTTGGTTTAGGGGTCTGGGAGGTGAGTTAACCATGAAAAACTATATGTATTTTCATGGTTTACTAAGTTAGTAGATTCATTGCGGGTACTTATCCAATACGTGTGTGGAAGTATCAGATAGGAGTATGTCAAACTTTTTGCTATAAGTTTAGCATATGTTGAAGAAAGTTTTGAGTCCCTTGCTTCGTCTCTATTTTGTGGGATCTCATTGTTAAAGGATTCTCCACATTCACCTCTGCCGTCACCCTCCTCCATCAAGAATTTATGCACATTTAGTTGTGCTCCAGAACTAGGCTCAAAAACTCTTGAGGCAATTGGAGCTAAATTAAAGCTTGCTACTTGTTAGATTTTGTGCAGGATGGCCAACTTAATGATACATGAACTTGGATGTTCTTCGATCGAATATATGTTTAAATTTTGGCACTTTTTAAGTGTGTCATCAGATATCATAATGAGGTACCAATACAAATGTTGCATCCCTTTTTGACACTTTCTGTAAAGAGGCAAGATGAGAAGTCCATGGAACACTGGTTCAGCTTGGCTCAATTAGGACTAGTTTCACCATATGGGGTCGTATGGTTTGTGAACAAGTTATATAGGGTTTATCATGTGGGATTAATGCCGCTTCAGGATTTTCTCAACTGGCAAAAATTGAGGGACTTGTGTCTTAGGTCACAAGTTTCAGCTTTATGCCAAGTGAACTTGATGTCGCTATTGGCTTTGGGCCAGCACTGTTGCTGCTTGTAGTTCAGCATTCGATATCGTCAAGACTCCTACAAAAATTGCAGCCAGACGCTGAAAGAAAATTCCCGTACTCTGATTCTTTCGGCTACTCCATGAAAATATTTAAGGCAGGAGGACTTCTCGAACTCTACAATGGATTTCCTGCACATTGGATTCAGTTCTCCCTTGTGTGATGATGACTCTAATTTTCCTTAAACAAATTCAGGAGGTGGAGACGAAAATTGGAACGGTCAACAGCCGCATCCACTCCAGTTTAGTCTCTATATTTTGAGCAGTCGCCTTATTGTCGTGGTGTTGTTTTCTTAGTTTATGTAAATTCATGCCTTCGAAGTGGCTAGGTACACTTCAAGATTTTTTTTCCGGAAAAACCCTACTTCATTGTGAATATTCTTTTAAGGTTGTACTTTATGTACTATTCATGTTGCAGTAGATATTTGGAGCTACATCAATTTGGTATGTCTTTCTCTTTCTTGAGCTCAAACTAGTTACTAAGACCTTTGTTTTGTGAGTACCTCTCATTCTCCTCCACCCCACACACACGTGCAAAAAGAAAGAAAAGAGAAGAAGGAACTAAGAAGTCTGATGAAAGCAACTTTCTTTAAGGCTTGTGGACAATGATTAACACACAAATCCTGGAAAAAGCTGGATTGACAACCTTGAAAACCAAGGATTGAATCTTAAACGTTGGTGAAGGTACCAAGTACATATGCAGTTAGGAGGTTGCAAGTACATGATAGGTTCTCACTTGGATCCTTTCTTTTAGGACAACTGTGGTGTCGGGGCTAGCTTGATGCACCTCGACTAATTCCACGGGATACCTGACACCTCCCATCAACAACTGGTATAAGGTAACTATCTACCAAGACTAGGACAATTCGGGAAAAAATCACCTAGTTTGTTGTCTATATTAGGTTTCAACCTCAGAACTCATTGTTCTCCATTCACTTCATTGACCACTGCCACATTATTGGGTGCTCCCTAGACTCTTTTGGTAGCACACACATAAGATCAGTGTTATTATAGGTTAAATGCAAATAAAAGAGAGTTTATTCGAGGTTTTAAGCGATAACACAAATAAAGAACGAATTTAACGAAGAACGATGAATGAAGAAAAAATAAATATGCTAAGCGATTGAAATTTTAAGTCACGGACTTGATTTCCTGTTAGTGGACTTGAAGCTCAAACTTCGTATCAATGCACCAACAGGTGATAAGTCGTCCACTGCAAGAAAGGGAATATCATGACTTGTTACTGCATTAATACCTATTCAAAGTTTAAGCTTTGAAGTCCATAAACCTCATTCGAGTGAAATGGGATACATCCATGCTTCTCAACTTTCATGATTGGAGAATCATGATTTGGGATAGCTCTCTACCCTTTATGGTCATAGAATTATCTCTTGAAGACCTCCCATTTGTCACCTATCTTGCAATTATCACTGTTAGTCCCATTTTCTATAATAATGCAGTGTATCAAGAAAATATCTTTTTAAATAATGTTTTGTATCCATGCATTTCGTCACATTTTATTTTCTTCCTATTACCAACCTCCTATTTTACTAGATTTGTAAATCCACCCATAGCATCTTGATATTCTTCCATAAAGCTACATATTGAGATGAATTAGTCTTGGCTTTTCGTGTCATACTTAGCTTTGATAACCAACAACAACATACCCTGTGTAACCCCACAAGTGAAGTATGGGGAAGGTAAGATGTACGCAGAGAAGGGTTACAAGAATTAAAAAAAATAACAACAACATATCTAGATAAAAAATAAAATGAAGCAACATATTGTAGAAGCACATAGAAGAATAAGAAACTACATGATTGCTAATTACTACTACTATAATAAGGAGAAGAGGATATTGAGCAAGGCCCCTGCCTCCCCCAGTCCTTTTGGAGCTAGCATAGCTGATGATATGGTATAGCCCTTCTCTAGCCTAGTCTAGGGACCACACTCATCTACGTACTAATCTTCTACTTTAATCCTCATCCTTCTTGCCTTCCTATTTAGGATTTTGTCGGTAGGCGATTGAAGTTGTGTCATGTCTTGTCTAATTACCTCTTCTGGGTTCTTTTTCGGTCTACCTCTACCTCTCCTTACTCTTGCTACAACGAACTTCTCACACCTTCCAATGGGCGCATCCGCGTACCTCTTATTCACATGCTTGAACTATCTCAGGCTTTCTTTTCTATAAATCAAGTTCCTATTAAATTTTGTTGCAACTTAAAACCATAAACGATTATCATGTCCAATAAATCATGTTTTCTTTCAGCTAATATGCTACTAAAGAAACTTCTTCAACTACACAACTTTTGGAGACCACAATATTCCTCTTTTACCTCAAAAGATTTATAGGTCATCAACCTACAAAATGTTGGATGTTGGCACATTGTTTCCTATGTCCCTAATTTGATTATGATGGAATACTTGACACAAGTGATGCAACATTTAATTCATTAAATCTACCTATCAACAAAATCGAAAGTATTGTTCGACAAAATTTAGTAAAACCAACATTCACTACCGAAAAGGAAAGACCACGCAACACGGTTAACACCTTTTTGGTCTAATTTTCACATAACACGTGTCACCAATGGTTTACGCATTAAAAATTTAAAGAAATCAGAACTTCACCTTATTTATTAATTATATTTTCCTATTTCTTTGTAGTATTTGTAGTATACAACTTATCTATTGATTATGTTTCCTATTTCTTTGTAGCTGTAATTAGCAATAAGGAGGTTATTCCTCCATTCACATTTTAGTAGTAGTACGAAGTTATTTCCTTGTTATTAGGTGGGCCGTGGGTGGTTAATCTACTAATGTGCATTTAAAGTTATTTGAATTCAATGAAAAGATAAGCAAAAAATTGTTCTAGTTTTTGAGTACTTTAACTCAAGAGATTGCAGGTTCAAATGAACACCATAGGTCGTATTAAAGGAAACATTTGATTTCATCTTGTAGTGTCCCATAACTAGGTCCATATTAGGGGACCGTAACAAGTTGGTATTAGAAACGGGAGTTGTGGGAAATCTGATACAAAAATAACTATGCCAACTGTTGACTTTATTCTGAGAAGAACGTGACCAATTTAGCAAGACAATAAGCTATAAATGCTCGCTTTGATGCACTTCAACATAAAATGGTAGTCAGAACCGAGGTTGAAAAGGTAAAGCAGTGGCTACGGGATCAGGGTAAAAACTAGTGAGAATTCCATGATTCCTAAATATACAAAGTTGAATTTTCCACGATCTTGTGGATATGAGGACTCCTTGGGATGGTTGAACATGTGCGAGCATTACTTTCAACACAGGCAAACACCAAAAAAAGGAAAAAAAGGGTCTTGCTTCTTTCGGAAGGAATTGCACAACTCTAGTTTCTTCAACTAGTGAAAGATATGCCTCAATGATATTGGGATGAGTTCAAATGTCAATATTCATTTTGGACCGCCAATCAAAAGTCAAAAGTTGGAAGAATTGGCCAAGTTACGTCAAATTAGATATGTCCAAGAAAGGTTTGAACAATTGGTTTCGTGGGGTAGTACCCTTATACAAGCACAGAAAAGGGTCTTGCTTCCTTTCATTTGGTGGAAATTGCACAACTCTAGTTTCTTCAACTAGTAAAAGATATGCCTCAACTTTTGACTTCTAATTTGACGTTCATTTTGGACCGCCAATTAGAAGTCAAAAGTTAGAAGAATTGGCCAAGTTATGTCACATTGGATCTGTCCAAGAGGTTTGAACAATTGGTTTCGTGGGTTAGTACCCTTGTACAAGCACAAAATAGATGGAATTTTGCATAAATGGTCTTGCTGATTACATGAGGTCAACTAGTTCTTAGATTGATTGAACTCAACATAGTTAGAGATTAAAGGACATAGCCTTTCTTATTATTGCTTGGGTGGAATCAGTTGACAAAAAACTCGAACGTAATTGACTTCTTTCTAATTTAAATAAAGAAAGAGTTGATTTGGAGAAGAACTTGATCCTCTCCTAGCAGTGAAGTGTCATATCCTAGAGTGAGGGCTTTACCGGTCGTTAAGATAGAGTTGGTGCCGGTAGTTGTTCTTGCAAAATTGAGGGAGAGTTGCATAATCCTCCAGATTTGGCTATAGCGGTGAATATTTCCCGACTTTATGAATGCAAGGAACAACCTCTTTGTTTGCAATCATTAGATGCTTGTAGAACAAAGACAACAAATTTCTCACCTCAACAACCACCAGATTTGAAAAACTAACCAAATTTAAAATGGAGGAAAGGTGACTTAAGGGACTCTATTTCAACTGTGACGAATTATTCACTCTGAGCCATAAGTGAAAGGAATTATTTTTGATTGGTTCCATTGATGATGGGGAAGAATTTGCTGGAAAAGAAAGAAATTCTAGTACTTCCCACATTTTGCTCGAGGACAAGTGCAATTTGAAGGAGGGTAGTAATGTTAGAACCCTTTTAGTCTGCTACCAGTTTACGCATGGAAACTTTAAAGAAATCAGAAAGTAGATTACTTAAGCTTATCTATTAATTATGTTTTCCTATTTCTTTGTAGCAGTTATAAGCAGTAATAGGAGGTTATTCCTCCTCTTTATAATTTCAATAATAGTGCGAAGTTATTTCCTTGCTATCAAGTGGGTGGATAATCTACCATTATGTTATTTAAAGTAATTTGAATTTCAGTGAAAAGATAAGCAGAAAATTATTCCAGTTTTTGAGTACTTTAACTCGAGAGATTGCAGGTTCTCTCTTAACGAACCAACAACATAGGTTGTATCATGCAGTGCCCCATAACTTAGATCCATATTAGGGGACCATAACAACCCACATTGTTCTGACTCCGTATTGGTCTATCTTTCTTCCATTGAACAAGGCATCTGTGATTTCCCTTCTTTGCATGGAGGCATTTCTCACATTCATTGTCAGAATCTGAGACTCTGATATTGTATTAACTGTTCCGTTCTTTCATTCAATACTTTAGCTTCTATCTTGCCCATTAATGATGATAGCATCACTTATTTCTGTATATCTATTGTTCAACCCATTTATTTTACATTTTTTATGAGAATCTTATTTGTCTGTGTGGGTAGCATCCTCTTGTTGCTTTCTTTGAATATGATTTTACAGATACTAAAATGATGCAGTTGTAGGGTGATGTTGTTATTCATTTACTTGTTTATTAAAATATCTTACTAACTAGATTCGGTTAAATGTCAGTTCTACTTGGGTTGTGGCACAAAATAAGTCTTTCCTCCTAATAATAGTTACGAGTTTCCCTATCCGCAAAAAGATTTACTTGTTTTAATGCTTATTTCACTCCTCATCTATTTACATGGAAGGCATTATGACCAGCAGTTTTGACAGGGTTGTCTCATTTGTAAAGCTTGTGTTCATTGTAGTACCAAGTTATTGCTTTGGTTTGCACCCAAGTGTTTAATAAAGTTGGTGCAAACCTTAGAGACAGATGTTAAATCCCAGTTGAGACATAAATTACTAACAGATTTCATCACGTTTGCCTATCCTATGCTTTGATGGGCAGAGTTACCGATGGAATAGCCGAGCTACGCAGTAGCTGACTCAGACACTGCCATTTCAAAGAAAGAAAACAAAATTATTGGTTTTACACTTTCTTAACTGTTTCTTCTGTGTTGTCATTTTATATGCATAGACAAAAATGTGTTATTGATTTCAGGGTGCTTTTGGCTTGGTTGCTATTTCTTTGTTAAATGTATACTACTTGTATATCTATAGTGTGCGCTAGTAGTCTGCTAAATTACTTTGTTTGGGGATTAAGTTGATAAATAAGATTTGAAACTCCTGAGAACCCCATTTGATCAGGAAGAGCTACTCATGTGAAACAGTTGCACTCTGACTCATTTATTTACTGAGCTGTAGTGGGATTGTGCATATTCCAAATTCTGTACTAAAAACAGTCGGAACATGGTGGATATTAGCTGAGCCATAAGTTATATATTATTTGCTTATCAAGAATTCATCATTATCTTCTCCTGATGTTGTTAAGTAGTTTTCTTTCCTTGGGAGCTTTGCCTATTGATTTCCTTTTCCATCTCTCAAGTAGTTCCATGTCTTTCTTAGTTTTTGGTTTTTATTTCTTTTCAATGTGTACTCTCCATTTTAGCAGCCAGCCCAATAAAAGACTAGGAATATAAAAGGAGAATGATGGAGATATTTCAATAACTAATGTCCATTTTTTCTGTTTTTGTACATCAGTTTCTGCCTAAGAAAGGAGGGACGCCAAAGAAAAATGAGATCGTGTTTACTGCACCAACAGGGGAGGAGATTACTACAAAGAAACAGTTGCAGCAGTACCTGAAGTCTCACCCTGGTGGTCCTGCAATCACTGAGTTTGACTGGGGAAGTGGGGAAGCTCCAAGAAGATCCACAAGGATCACTGGAAAGGCAAAGACAGCTCCACTTGCAGCAGAAAGTGTGACTCCAACAAAGCGAAACAGAAAATCTTCAGCTTCTAAGAAGGACGTGAAAGACAAAAAAGAACAGGAAGAAACT</genome_strand>
        <mrna_strand>TTTTTTCAGAAAAATTGAGTTAGGTGAGGAGAAGGAAGGAAGACGAAGAGAGAAAAATGTCGAGCTCTGTGGAGATGAATGAAGTTGTTTCCATTGAGCTTCCAGCTCCAAATGGCTGGTTGAAAAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTGCCTAAGAAAGGAGGGACGCCAAAGAAAAATGAGATCGTGTTTACTGCACCAACAGGGGAGGAGATTACTACAAAGAAACAGTTGCAGCAGTACCTGAAGTCTCACCCTGGTGGTCCTGCAATCACTGAGTTTGACTGGGGAAGTGGGGAAGCTCCAAGAAGATCCACAAGGATCACTGGAAAGGCAAAGACAGCTCCACTTGCAGCAGAAAGTGTGACTCCAACAAAGCGAAACAGAAGATCTTCAGCTTCTAAGAAGGACGTGAAAGACAAAAAAGAACAGGAAGAAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>12</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="6668" PGL_stop="11321"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="6668" e_stop="6903"/>
            <exon e_start="7080" e_stop="7285"/>
            <exon e_start="8525" e_stop="8858"/>
            <exon e_start="10118" e_stop="10336"/>
            <exon e_start="10468" e_stop="10796"/>
            <exon e_start="10998" e_stop="11321"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.585" e_score="0.958"/>
          <exon-intron don_prob="0.997" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.946" e_score="1.000"/>
          <exon-intron don_prob="0.491" acc_prob="0.836" e_score="1.000"/>
          <exon-intron don_prob="0.975" acc_prob="0.995" e_score="1.000"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.958">
            <gDNA_exon_boundary e_start="6668" e_stop="6903" e_length="236"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.585">
            <gDNA_intron_boundary i_start="6904" i_stop="7079" i_length="176"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="7080" e_stop="7285" e_length="206"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.998">
            <gDNA_intron_boundary i_start="7286" i_stop="8524" i_length="1239"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="8525" e_stop="8858" e_length="334"/>
          </exon>
          <intron i_serial="3" don_prob="0.994" acc_prob="0.946">
            <gDNA_intron_boundary i_start="8859" i_stop="10117" i_length="1259"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="10118" e_stop="10336" e_length="219"/>
          </exon>
          <intron i_serial="4" don_prob="0.491" acc_prob="0.836">
            <gDNA_intron_boundary i_start="10337" i_stop="10467" i_length="131"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="10468" e_stop="10796" e_length="329"/>
          </exon>
          <intron i_serial="5" don_prob="0.975" acc_prob="0.995">
            <gDNA_intron_boundary i_start="10797" i_stop="10997" i_length="201"/>
          </intron>
          <exon e_serial="6" e_score="0.994">
            <gDNA_exon_boundary e_start="10998" e_stop="11321" e_length="324"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6668" stop="6903"/>
              <exon start="7080" stop="7285"/>
              <exon start="8525" stop="8837"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E480556" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6887" stop="6903"/>
              <exon start="7080" stop="7285"/>
              <exon start="8525" stop="8858"/>
              <exon start="10118" stop="10336"/>
              <exon start="10468" stop="10521"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E740063" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7245" stop="7285"/>
              <exon start="8525" stop="8858"/>
              <exon start="10118" stop="10336"/>
              <exon start="10468" stop="10586"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E591051" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8690" stop="8858"/>
              <exon start="10118" stop="10336"/>
              <exon start="10468" stop="10653"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210318" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10264" stop="10336"/>
              <exon start="10468" stop="10796"/>
              <exon start="10998" stop="11321"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343047" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10264" stop="10336"/>
              <exon start="10468" stop="10796"/>
              <exon start="10998" stop="11308"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342938" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10289" stop="10336"/>
              <exon start="10468" stop="10796"/>
              <exon start="10998" stop="11279"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342900" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAGGGAATTTGGATCTCCTATCAGACCTATTGCTCAGTCTACTCTTGATCAAACTTCTCGGAAAAAGTTCATTTGCCAGATTGTCCAACTTGGTGTGCAATCTTCAGACAGAATTTTTCATCTGAAGCTGTATCAAACCTTAATCGATTTGGGCCTGGAAGATGAACTACTTGAATATGGTGGCCCTGATTTGGTACCTTTTCTGCAAAATTCTGGTCGTGAACCTACAAATGAG : GTTCGTGCTGTCTCTGCAGTGGCATCTCCAACTTCACCATTGGCTCATGCTAGAGTACCTGCACTATCCAACCAAGCCAAATATTTTGAGCTTTTGGCTCGTTATTATGTTTTGAAGAGACAACACGTTCTTGCAGCCCATGTTTTGGTGAGGCTGGCAGAAAGGCGCTCCACTGATGCAGGGGATGCTCCTAGTTTAGAACAAAG : GCGGCAATACTTGAGTAATGCTGTTTTGCAAGCAAAGAGTGCCCATGACACTGATGGTATGAGTGGTTCTGCGCGGGGTGCTCTTGACAATGGGCTGCTTGATTTGCTCGAAGGAAAGCTTGCTGTTCTTCAGTTTCAAATTAAAATTAAAGATGAACTGGAGGCTATGTCTTCCAGGTTAGAGTCATCTACAAGCACATCTGAATCTGGTTCTGGTGAAACATCACCCAATATGAGTAATATTCTTCGAGAAAAAGCGAAGGAGCTATCAATGGAATTGAAGAGCATTACACAGTTGTATAATGACTATGCTGTTCCTTTTGAGATATGGGAG : ATATGCCTGGAGATGTTGTACTTCGCTAGCTACTCCGGTGATGCTGATAGCAGCATACTGCGAGAGACGTGGGCTAGGCTCATTGATCAAGCTCTTATGAGGGGTGGGATTGCTGAAGCTTGTGCTGTACTGAAGAGGGTTGGTACCCATGTGTATCCCGGAGATGGAACTGTTTTACCATTTGATACTCTCTGTCTTCACCTTGAAAAGGCTGCACTG : GAACAAGTGGTTTCTGGTGCTGAATCTGTTGGAGATGAAGATATTCCTAGGGCTCTTTTAGCTGCTTGCAAGGGTGCAGTAGAGCCTGTATTAAATACTTATGACCAGCTGTTATCAAGTGGGGCAGTGTTGCCAACTCCGAATCTTAGATTGCGTCTCCTGCGCTCCGTACTGGCTTTACTTCGTGAATGGGCACTTTCTGTCTTTGCACAGGGAATGGGTACAAGTGTTACTGGAGCCTCTCTGATTCTTGGTGGAACTTTATCATTAGGACAGACTGCAGTTGGTAATCAAGGTGTTCGCGATAAAATAACAAGTGCAGCAAATCG : ATATATGACAGAAGTGCGAAGATTACCTCTTCCACAAAATCAAACTGAAGCTGTTTATCAAGGTTTTCGTGAACTTGAAGAATCATTGTTAAGTCCATTCCCTTTTGAACGGTTTTGATTTTTGTGATATCATATGCTTGTACAATATCCTGCCTTTTCTTTGTCCTTCACTGCATATTTGATTTGAACAAAACAAATTTTTTCTCATGAACTGTATTTTATTAGTTCTGATGTTTAGCATTGCCTTGATACTTCTGTAACATGTGATCATACATCAATGACAGAATTGCCTTAGAATTGGAAAATGATTATTTAATCAATTTT</gDNA_template>
            <first_frame> R  G  N  L  D  L  L  S  D  L  L  L  S  L  L  L  I  K  L  L  G  K  S  S  F  A  R  L  S  N  L  V  C  N  L  Q  T  E  F  F  I  *  S  C  I  K  P  *  S  I  W  A  W  K  M  N  Y  L  N  M  V  A  L  I  W  Y  L  F  C  K  I  L  V  V  N  L  Q  M  R :   F  V  L  S  L  Q  W  H  L  Q  L  H  H  W  L  M  L  E  Y  L  H  Y  P  T  K  P  N  I  L  S  F  W  L  V  I  M  F  *  R  D  N  T  F  L  Q  P  M  F  W  *  G  W  Q  K  G  A  P  L  M  Q  G  M  L  L  V  *  N  K   : G  G  N  T  *  V  M  L  F  C  K  Q  R  V  P  M  T  L  M  V  *  V  V  L  R  G  V  L  L  T  M  G  C  L  I  C  S  K  E  S  L  L  F  F  S  F  K  L  K  L  K  M  N  W  R  L  C  L  P  G  *  S  H  L  Q  A  H  L  N  L  V  L  V  K  H  H  P  I  *  V  I  F  F  E  K  K  R  R  S  Y  Q  W  N  *  R  A  L  H  S  C  I  M  T  M  L  F  L  L  R  Y  G  R :   Y  A  W  R  C  C  T  S  L  A  T  P  V  M  L  I  A  A  Y  C  E  R  R  G  L  G  S  L  I  K  L  L  *  G  V  G  L  L  K  L  V  L  Y  *  R  G  L  V  P  M  C  I  P  E  M  E  L  F  Y  H  L  I  L  S  V  F  T  L  K  R  L  H  W :   N  K  W  F  L  V  L  N  L  L  E  M  K  I  F  L  G  L  F  *  L  L  A  R  V  Q  *  S  L  Y  *  I  L  M  T  S  C  Y  Q  V  G  Q  C  C  Q  L  R  I  L  D  C  V  S  C  A  P  Y  W  L  Y  F  V  N  G  H  F  L  S  L  H  R  E  W  V  Q  V  L  L  E  P  L  *  F  L  V  E  L  Y  H  *  D  R  L  Q  L  V  I  K  V  F  A  I  K  *  Q  V  Q  Q  I   : D  I  *  Q  K  C  E  D  Y  L  F  H  K  I  K  L  K  L  F  I  K  V  F  V  N  L  K  N  H  C  *  V  H  S  L  L  N  G  F  D  F  C  D  I  I  C  L  Y  N  I  L  P  F  L  C  P  S  L  H  I  *  F  E  Q  N  K  F  F  L  M  N  C  I  L  L  V  L  M  F  S  I  A  L  I  L  L  *  H  V  I  I  H  Q  *  Q  N  C  L  R  I  G  K  *  L  F  N  Q  F  </first_frame>
            <second_frame>  E  G  I  W  I  S  Y  Q  T  Y  C  S  V  Y  S  *  S  N  F  S  E  K  V  H  L  P  D  C  P  T  W  C  A  I  F  R  Q  N  F  S  S  E  A  V  S  N  L  N  R  F  G  P  G  R  *  T  T  *  I  W  W  P  *  F  G  T  F  S  A  K  F  W  S  *  T  Y  K  *   : G  S  C  C  L  C  S  G  I  S  N  F  T  I  G  S  C  *  S  T  C  T  I  Q  P  S  Q  I  F  *  A  F  G  S  L  L  C  F  E  E  T  T  R  S  C  S  P  C  F  G  E  A  G  R  K  A  L  H  *  C  R  G  C  S  *  F  R  T  K  :  A  A  I  L  E  *  C  C  F  A  S  K  E  C  P  *  H  *  W  Y  E  W  F  C  A  G  C  S  *  Q  W  A  A  *  F  A  R  R  K  A  C  C  S  S  V  S  N  *  N  *  R  *  T  G  G  Y  V  F  Q  V  R  V  I  Y  K  H  I  *  I  W  F  W  *  N  I  T  Q  Y  E  *  Y  S  S  R  K  S  E  G  A  I  N  G  I  E  E  H  Y  T  V  V  *  *  L  C  C  S  F  *  D  M  G   : D  M  P  G  D  V  V  L  R  *  L  L  R  *  C  *  *  Q  H  T  A  R  D  V  G  *  A  H  *  S  S  S  Y  E  G  W  D  C  *  S  L  C  C  T  E  E  G  W  Y  P  C  V  S  R  R  W  N  C  F  T  I  *  Y  S  L  S  S  P  *  K  G  C  T   : G  T  S  G  F  W  C  *  I  C  W  R  *  R  Y  S  *  G  S  F  S  C  L  Q  G  C  S  R  A  C  I  K  Y  L  *  P  A  V  I  K  W  G  S  V  A  N  S  E  S  *  I  A  S  P  A  L  R  T  G  F  T  S  *  M  G  T  F  C  L  C  T  G  N  G  Y  K  C  Y  W  S  L  S  D  S  W  W  N  F  I  I  R  T  D  C  S  W  *  S  R  C  S  R  *  N  N  K  C  S  K  S  :  I  Y  D  R  S  A  K  I  T  S  S  T  K  S  N  *  S  C  L  S  R  F  S  *  T  *  R  I  I  V  K  S  I  P  F  *  T  V  L  I  F  V  I  S  Y  A  C  T  I  S  C  L  F  F  V  L  H  C  I  F  D  L  N  K  T  N  F  F  S  *  T  V  F  Y  *  F  *  C  L  A  L  P  *  Y  F  C  N  M  *  S  Y  I  N  D  R  I  A  L  E  L  E  N  D  Y  L  I  N  F </second_frame>
            <third_frame>   R  E  F  G  S  P  I  R  P  I  A  Q  S  T  L  D  Q  T  S  R  K  K  F  I  C  Q  I  V  Q  L  G  V  Q  S  S  D  R  I  F  H  L  K  L  Y  Q  T  L  I  D  L  G  L  E  D  E  L  L  E  Y  G  G  P  D  L  V  P  F  L  Q  N  S  G  R  E  P  T  N  E  :  V  R  A  V  S  A  V  A  S  P  T  S  P  L  A  H  A  R  V  P  A  L  S  N  Q  A  K  Y  F  E  L  L  A  R  Y  Y  V  L  K  R  Q  H  V  L  A  A  H  V  L  V  R  L  A  E  R  R  S  T  D  A  G  D  A  P  S  L  E  Q  R :   R  Q  Y  L  S  N  A  V  L  Q  A  K  S  A  H  D  T  D  G  M  S  G  S  A  R  G  A  L  D  N  G  L  L  D  L  L  E  G  K  L  A  V  L  Q  F  Q  I  K  I  K  D  E  L  E  A  M  S  S  R  L  E  S  S  T  S  T  S  E  S  G  S  G  E  T  S  P  N  M  S  N  I  L  R  E  K  A  K  E  L  S  M  E  L  K  S  I  T  Q  L  Y  N  D  Y  A  V  P  F  E  I  W  E  :  I  C  L  E  M  L  Y  F  A  S  Y  S  G  D  A  D  S  S  I  L  R  E  T  W  A  R  L  I  D  Q  A  L  M  R  G  G  I  A  E  A  C  A  V  L  K  R  V  G  T  H  V  Y  P  G  D  G  T  V  L  P  F  D  T  L  C  L  H  L  E  K  A  A  L  :  E  Q  V  V  S  G  A  E  S  V  G  D  E  D  I  P  R  A  L  L  A  A  C  K  G  A  V  E  P  V  L  N  T  Y  D  Q  L  L  S  S  G  A  V  L  P  T  P  N  L  R  L  R  L  L  R  S  V  L  A  L  L  R  E  W  A  L  S  V  F  A  Q  G  M  G  T  S  V  T  G  A  S  L  I  L  G  G  T  L  S  L  G  Q  T  A  V  G  N  Q  G  V  R  D  K  I  T  S  A  A  N  R :   Y  M  T  E  V  R  R  L  P  L  P  Q  N  Q  T  E  A  V  Y  Q  G  F  R  E  L  E  E  S  L  L  S  P  F  P  F  E  R  F  *  F  L  *  Y  H  M  L  V  Q  Y  P  A  F  S  L  S  F  T  A  Y  L  I  *  T  K  Q  I  F  S  H  E  L  Y  F  I  S  S  D  V  *  H  C  L  D  T  S  V  T  C  D  H  T  S  M  T  E  L  P  *  N  W  K  M  I  I  *  S  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0078D19.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="6670" stop="6903"/>
                    <exon start="7080" stop="7285"/>
                    <exon start="8525" stop="8858"/>
                    <exon start="10118" stop="10336"/>
                    <exon start="10468" stop="10796"/>
                    <exon start="10998" stop="11115"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1437</number_coding_nucleotides>
                  <number_encoded_amino_acids>479</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>REFGSPIRPIAQSTLDQTSRKKFICQIVQLGVQSSDRIFHLKLYQTLIDLGLEDELLEYGGPDLVPFLQNSGREPTNEVRAVSAVASPTSPLAHARVPALSNQAKYFELLARYYVLKRQHVLAAHVLVRLAERRSTDAGDAPSLEQRRQYLSNAVLQAKSAHDTDGMSGSARGALDNGLLDLLEGKLAVLQFQIKIKDELEAMSSRLESSTSTSESGSGETSPNMSNILREKAKELSMELKSITQLYNDYAVPFEIWEICLEMLYFASYSGDADSSILRETWARLIDQALMRGGIAEACAVLKRVGTHVYPGDGTVLPFDTLCLHLEKAALEQVVSGAESVGDEDIPRALLAACKGAVEPVLNTYDQLLSSGAVLPTPNLRLRLLRSVLALLREWALSVFAQGMGTSVTGASLILGGTLSLGQTAVGNQGVRDKITSAANRYMTEVRRLPLPQNQTEAVYQGFRELEESLLSPFPFERF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="13102" PGL_stop="12536"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="13102" e_stop="12536"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="13102" e_stop="12536" e_length="567"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13102" stop="12536"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214438" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGAGAAGGACTCCAAAATGGCTGATCATACTGCTGAGCAGGATGTCCAAATGGCTGATCATGCAGCTGAGAAGAAAGATGAAATGCATTCTTCTGCTGTTGATGTTGTGGAAAAGAACCAAGCTGAAAAAATGGGTGAAGGCCAAAAGGCAGGAGATGGTCCTTCTAAAGAGGCTGAGGTTGAGAAAGATGACAAAATGTCAGACTGTGTTGCAGAGAAGAAAGATAAAACTTCTGATGTTGATGCTGTGAAAAGTGATGACCCAACTGAAGATGGAAAAGCAGAAGATGCTCCTGCTGATGTGTCTGCGGCTGACAAAAATGTTGGAGATGCTTTCATGGTGAAAGAGGTGCCAATTGGGAAAGCAGCGGATGAAGCTGAAGCAACTGATAACGGTGTCAACACCGATGAGATTAACCCTTGAATAGTGACATGGAGCCATTCTCTGCTACCCTCGTACCCTGCTCTCTTATTCTCTCTAACCTCTTACCCTTGTTACTTTTCTCTAGTGACTGTAGTGTTGTTGTCAATGGTAGTACTCTCAGACTGTTCATGAGATATCTGTAT</gDNA_template>
            <first_frame> *  E  G  L  Q  N  G  *  S  Y  C  *  A  G  C  P  N  G  *  S  C  S  *  E  E  R  *  N  A  F  F  C  C  *  C  C  G  K  E  P  S  *  K  N  G  *  R  P  K  G  R  R  W  S  F  *  R  G  *  G  *  E  R  *  Q  N  V  R  L  C  C  R  E  E  R  *  N  F  *  C  *  C  C  E  K  *  *  P  N  *  R  W  K  S  R  R  C  S  C  *  C  V  C  G  *  Q  K  C  W  R  C  F  H  G  E  R  G  A  N  W  E  S  S  G  *  S  *  S  N  *  *  R  C  Q  H  R  *  D  *  P  L  N  S  D  M  E  P  F  S  A  T  L  V  P  C  S  L  I  L  S  N  L  L  P  L  L  L  F  S  S  D  C  S  V  V  V  N  G  S  T  L  R  L  F  M  R  Y  L  Y </first_frame>
            <second_frame>  E  K  D  S  K  M  A  D  H  T  A  E  Q  D  V  Q  M  A  D  H  A  A  E  K  K  D  E  M  H  S  S  A  V  D  V  V  E  K  N  Q  A  E  K  M  G  E  G  Q  K  A  G  D  G  P  S  K  E  A  E  V  E  K  D  D  K  M  S  D  C  V  A  E  K  K  D  K  T  S  D  V  D  A  V  K  S  D  D  P  T  E  D  G  K  A  E  D  A  P  A  D  V  S  A  A  D  K  N  V  G  D  A  F  M  V  K  E  V  P  I  G  K  A  A  D  E  A  E  A  T  D  N  G  V  N  T  D  E  I  N  P  *  I  V  T  W  S  H  S  L  L  P  S  Y  P  A  L  L  F  S  L  T  S  Y  P  C  Y  F  S  L  V  T  V  V  L  L  S  M  V  V  L  S  D  C  S  *  D  I  C   </second_frame>
            <third_frame>   R  R  T  P  K  W  L  I  I  L  L  S  R  M  S  K  W  L  I  M  Q  L  R  R  K  M  K  C  I  L  L  L  L  M  L  W  K  R  T  K  L  K  K  W  V  K  A  K  R  Q  E  M  V  L  L  K  R  L  R  L  R  K  M  T  K  C  Q  T  V  L  Q  R  R  K  I  K  L  L  M  L  M  L  *  K  V  M  T  Q  L  K  M  E  K  Q  K  M  L  L  L  M  C  L  R  L  T  K  M  L  E  M  L  S  W  *  K  R  C  Q  L  G  K  Q  R  M  K  L  K  Q  L  I  T  V  S  T  P  M  R  L  T  L  E  *  *  H  G  A  I  L  C  Y  P  R  T  L  L  S  Y  S  L  *  P  L  T  L  V  T  F  L  *  *  L  *  C  C  C  Q  W  *  Y  S  Q  T  V  H  E  I  S  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0078D19.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="13101" stop="12679"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>420</number_coding_nucleotides>
                  <number_encoded_amino_acids>140</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EKDSKMADHTAEQDVQMADHAAEKKDEMHSSAVDVVEKNQAEKMGEGQKAGDGPSKEAEVEKDDKMSDCVAEKKDKTSDVDAVKSDDPTEDGKAEDAPADVSAADKNVGDAFMVKEVPIGKAADEAEATDNGVNTDEINP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="23285" PGL_stop="13283"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="23285" e_stop="23114"/>
            <exon e_start="13722" e_stop="13283"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.989" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="23285" e_stop="23114" e_length="172"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.989">
            <gDNA_intron_boundary i_start="23113" i_stop="13723" i_length="9391"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="13722" e_stop="13283" e_length="440"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23285" stop="23114"/>
              <exon start="13722" stop="13426"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245980" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23249" stop="23114"/>
              <exon start="13722" stop="13283"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318965" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23241" stop="23114"/>
              <exon start="13722" stop="13426"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269840" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23208" stop="23114"/>
              <exon start="13722" stop="13299"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E725689" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAAATGAGTCAGTTTGTTTTTGTGTATAGAGAGAGCGTTTTTCATTTTTTCAGAAAAATTGAGTTAGGTGAGGAGAAGGAAGGAAGACGAAGAGAGAAAAATGTCGAGCTCTGTGGAGATGAATGAAGTTGTTTCCATTGAGCTTCCAGCTCCAAATGGCTGGTTGAAAAGG : TTTCTGCCTAAGAAAGGAGGGACGCCAAAGAAAAATGAGATCGTGTTTACTGCACCAACAGGGGAGGAGATTACTACAAAGAAACAGTTGCAGCAGTACCTGAAGTCTCACCCTGGTGGTCCTGCAATCACTGAGTTTGACTGGGGAAGTGGGGAAGCTCCAAGAAGATCCACAAGGATCACTGGAAAGGCAAAGACAGCTCCACTTGCAGCAGAAAGTGTGACTCCAACAAAGCGAAACAGAAAATCTTCAGCTTCTAAGAAGGACGTGAAAGACAAAAAAGAACAGGAAGAAACTGAGGCAGCAAAGGATGTTGACATGCCAGAAGCTGACAAACAGGAAAAGGATGGTGTGTCTGTGGAAGCTGAAAAACATGAAAAGGATGCTGTGGCTGTGGAAGCTGGAAAACATGAAAAGGATGCTGCGGCTGTGGAAGCTGA</gDNA_template>
            <first_frame> *  M  S  Q  F  V  F  V  Y  R  E  S  V  F  H  F  F  R  K  I  E  L  G  E  E  K  E  G  R  R  R  E  K  N  V  E  L  C  G  D  E  *  S  C  F  H  *  A  S  S  S  K  W  L  V  E  K   : V  S  A  *  E  R  R  D  A  K  E  K  *  D  R  V  Y  C  T  N  R  G  G  D  Y  Y  K  E  T  V  A  A  V  P  E  V  S  P  W  W  S  C  N  H  *  V  *  L  G  K  W  G  S  S  K  K  I  H  K  D  H  W  K  G  K  D  S  S  T  C  S  R  K  C  D  S  N  K  A  K  Q  K  I  F  S  F  *  E  G  R  E  R  Q  K  R  T  G  R  N  *  G  S  K  G  C  *  H  A  R  S  *  Q  T  G  K  G  W  C  V  C  G  S  *  K  T  *  K  G  C  C  G  C  G  S  W  K  T  *  K  G  C  C  G  C  G  S  * </first_frame>
            <second_frame>  K  *  V  S  L  F  L  C  I  E  R  A  F  F  I  F  S  E  K  L  S  *  V  R  R  R  K  E  D  E  E  R  K  M  S  S  S  V  E  M  N  E  V  V  S  I  E  L  P  A  P  N  G  W  L  K  R  :  F  L  P  K  K  G  G  T  P  K  K  N  E  I  V  F  T  A  P  T  G  E  E  I  T  T  K  K  Q  L  Q  Q  Y  L  K  S  H  P  G  G  P  A  I  T  E  F  D  W  G  S  G  E  A  P  R  R  S  T  R  I  T  G  K  A  K  T  A  P  L  A  A  E  S  V  T  P  T  K  R  N  R  K  S  S  A  S  K  K  D  V  K  D  K  K  E  Q  E  E  T  E  A  A  K  D  V  D  M  P  E  A  D  K  Q  E  K  D  G  V  S  V  E  A  E  K  H  E  K  D  A  V  A  V  E  A  G  K  H  E  K  D  A  A  A  V  E  A   </second_frame>
            <third_frame>   N  E  S  V  C  F  C  V  *  R  E  R  F  S  F  F  Q  K  N  *  V  R  *  G  E  G  R  K  T  K  R  E  K  C  R  A  L  W  R  *  M  K  L  F  P  L  S  F  Q  L  Q  M  A  G  *  K  G :   F  C  L  R  K  E  G  R  Q  R  K  M  R  S  C  L  L  H  Q  Q  G  R  R  L  L  Q  R  N  S  C  S  S  T  *  S  L  T  L  V  V  L  Q  S  L  S  L  T  G  E  V  G  K  L  Q  E  D  P  Q  G  S  L  E  R  Q  R  Q  L  H  L  Q  Q  K  V  *  L  Q  Q  S  E  T  E  N  L  Q  L  L  R  R  T  *  K  T  K  K  N  R  K  K  L  R  Q  Q  R  M  L  T  C  Q  K  L  T  N  R  K  R  M  V  C  L  W  K  L  K  N  M  K  R  M  L  W  L  W  K  L  E  N  M  K  R  M  L  R  L  W  K  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0078D19.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23218" stop="23114"/>
                    <exon start="13722" stop="13285"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>543</number_coding_nucleotides>
                  <number_encoded_amino_acids>181</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VRRRKEDEERKMSSSVEMNEVVSIELPAPNGWLKRFLPKKGGTPKKNEIVFTAPTGEEITTKKQLQQYLKSHPGGPAITEFDWGSGEAPRRSTRITGKAKTAPLAAESVTPTKRNRKSSASKKDVKDKKEQEETEAAKDVDMPEADKQEKDGVSVEAEKHEKDAVAVEAGKHEKDAAAVEA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 26 chains have been computed
$ 
$ memory statistics:
$ 27632 bytes spliced alignments in total
$ 12 spliced alignments have been stored
$ 2302 bytes was the average size of a spliced alignment
$ 8072 bytes predicted gene locations in total
$ 3 predicted gene locations have been stored
$ 2690 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 29 backtrace matrices have been allocated
$ 
$ date finished: 2009-03-02 08:34:15
-->
