<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-07-24 21:32:57"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U604138" ref_strand="+" ref_description="SGN-U604138 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157357081|emb|CAO63569.1| (e_value=4e-23) unnamed; (*ATH) AT3G59190.1 (e_value=3e-16) | Symbol: None | F-box family protein, contains F-box domain Pfam:PF00646 | chr3:21895504-21897753 FORWARD | Aliases: F25L23.50; (*SWP) sp|Q1PED9|FBL63_ARATH (e_value=2e-15) F-box/LRR-repeat protein At3g59190 OS=Arabidopsis thaliana GN=At3g59190; ">
      <seq>acacagagttgggatggtcgtgttcagtacttctccgatgatcaaatttcgccggtaacgaaggttacaggtcgccgtggttccatatttactgtctacttttgcaaccaaaagcttcggtctccgagttctctttcctcaaatggtcactgtcgtttctagaagtaggtggcacacaattaacagcttcaaacggcatactactttggaagtgcataaccctgaaggcggagaagatgagatcagtaatttacctgattccattcttcttcacattctttcatatcttcctaccagagatgttgtgggcacatgtatactttcaacaaggtggaagaatctttggacttgtgttgaaaacattgactttgatgactcatttctctactcaagtagggtttttggttatccgatgaaggtcactagtttcatgcaccttgttcacagatttcttcaacttcgagaaaaatcagtcataaaaaagtttcgcctttcctgccgtgtttgcttcagtgcctctcatgtatgttcatggctttcaactgttattaggcataatgttcaagatcttgatctctgtctttttgtanaanaactttttatgttgcctcaatgtgtttccagttgcaagacacttacttctctaaaacttgaaatgaattgtgttctggaactacctactantacttattttcctttccncaaaatcnngcanctatgtcttgncncatttcna</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="+" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="8175" stop="12037"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8475" g_stop="8635" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="161" r_length="161" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8636" i_stop="11162" i_length="2527">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11163" g_stop="11737" g_length="575"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="736" r_length="575" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="+" ref_id="SGN-U604138" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>736</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U604138" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8475" e_stop="8635"/>
          <exon e_start="11163" e_stop="11737"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACACAGAGTTGGGATGGTCGTGTTCAGTACTTCTCCGATGATCAAATTTCGCCGGTAACGAAGGTTACAGGTCGCCGTGGTTCCATATTTACTGTCTACTTTTGCAACCAAAAGCTTCGGTCTCCGAGTTCTCTTTCCTCAAATGGTCACTGTCGTTTCTAGTGAGCTCCTTTTCACTTATCTTCTTTAGTGTATCGTAACCTCTTTCGGTTTCCGTTTTGTGGTTATGGCTTCTGATGTCGTTGATGTATCAAACGTAGTTAATATTTATCTTTTGGTATTGTCACTTTATTCGATTTTTTTTTGGGTGTAAAATCTCTTTTTGTTTTGACACTTTTTTATTTTGGTTTCTCTTTGTGTACATATAGTTATCAGTAGTATTATCACTGTTCTCGTAGTTTTTTGTTATTATCGATTGCTTTCAGTGCTTAGGGTTGTTGCATTATGTTGCTGTAGCTACTATTTAATGTTCTGCATATTACTTGTTATGTCTTCTTTACCTTGATTATTTCCTTTCCGAATGACTTTGTTATGGGCTGCTTGAGTCGAGGATTGTTCAGAAACAATGTGCGGGTCTTTCAGAAACAATATATCCGTTAGTTGTGCGATCACACTTGCTATGTTGTTGTATCACACTTGCTATGTTGTTGTTGTTGGTATACATCTGATCTTTTGTTGGCTAAGATGACTACTGATTCAAAGAAAAGTTTCTAGGACACCAGGCTTAGTTAGTTGTGTCGTGTAGTCGAATCACATATTAATGATTCCCAAAATTTGCGATAATCCACATGGGAAAGTCTCTACCTGTTTACTAGAAATGGACATTTGGCCTAACTCCAAAAGTTAGCTCATCTACCTGTTTACTAGAAATGGACATATTTGGCCTTACTCCAAAAGTTAGCTCATAAGTCATAATGCGAGGATTGTTCAAGGAAAAAGAAATTCATTCCCTCAATCAATGTGGATTGACTCTAACACCAACGCATACTCAAGTCCAAACAGGTGTAGCATGGATAACATGTCATAGGAGCCCAGCATCAGGTAAAATAAGAGTAGTAATGGGTCTAGCTCTAGTATCATGTAAAGAAAATTAATGTTACGTGTAACTCAACCGTATAATTTTACTAACAAGTAGACAACCCATTTCCTGAATCATCGTGGGACTCTAATGGAGCTCTTAAGGGTAAATACTAGCAAGTTCAACTTGCACCACTTGCGTAGAAGGCTAGAAGCTAATTAATGTTATTTACACTCTACTTGGATTTTGTTACGTAGTGTTTCATAATATATCGTACTCTATTGTTTTATTGTTTTAATGAATACAACGATTGGATTGATTGTATCGTTCTTTGTCGTTATATAATGTCACACATGAATAATTTGAAGTACAAACCTACAAGAAAACTATGGGACAACTGGGTAGAACTACTATAAAAAATGAAGATAAAGGTGAAACAAGAATGTATAATAAAAAGTAAAGATGTCACCAAATCGGTCGTTGCAGTAAATGGGACATTTTGCCGTTACCTAATGATGGATTTAACAACACGAATGATAAAACTTAATCAAAACAAACCTTGTATTTGAGCTAACAATACAATATTACAATGGACAATAACCTTCCAAACAAGGTGCAAGGGCTTGAACTTTCAGGAAAGCTTTAAAAGATGTGAAACCTGGATATAACATGAAAGCAGGAATTGAGCTAAAATAAATTGCATTAAATTGGATTGACAAAAAGGGATAATAAAAGTTGTGGATGTGATCTTTTGGATGGCTGATTACCTACTGTAAAAGTTGTCGATCATTTTATAGATATTATAGATTTAGAAAAGTAAATTAAGCTACCCTGACTATCTTTTTCATATTCTTCTAGACTTGCTCCTTGAGTTTTCTATAAGTGGATCATGTTCACGTATCATGGGGATAATTGATAGTTATTGTATCAAGTAACTATTTTGTTCCTACTAAATCCTTTATTTTAGGTTTCTTTGGACTTGGCAAACACAGTAACTTCCGTGGTAACTTGGACCTTGATTAATTCTACGACATAGTTCCCTGGGTTTAGTTAGCTAAAGGTATAATCAAAGTCATGCTAATCTAATTGATTCAGACTCATTTAAGCTTAACTTCATGTTGTGAAGACTCAAAATCATTATCTTGTTGATAGGCTGACGGAAGGTGTAGAGGTGTTGTTCTCAACTCAGTTGAACTGGCTTTTGTCTCATTGTTTGGGCTGACTTGCCTCTCGGCTCAGCTAAGCTGGCCTTTGTCTCAACTGAAATCTTGGATTGAATAAATTACCCCTAAGCTCAGTCGAACAATGACCAAATGGGTTTATTTTAATGTCTATCACGTATCGATCATGTTGTGTCCTCCTTCTGTTTGGGGTCTTGGGGAAGAGGGTCAATTTCAGTTGAAGGGCATGATTCATTCGTGAGACTTCTAATGCATTAGGCTGATAATGGATATGTATCATTTCTAGGATTTAAATGGTTTTACAAAGTTTTAAATACTTTGATTGTTGCGCTTAGTAATTCATTGATGGTGTTACAGATCCTAGTTTCTTTAGTTTGATTTCCACACGTTAACTAACGAGGATCTTATGCTTCAACTTGTCTTTGTGTTTGCCCATTTCTATTTCTTTACTGCTAAGTTCCGCCTACTAACTGCTTTTTCCCTGCCCAGGAAGTAGGTGGCACACAATTAACAGCTTCAAACGGCATACTACTTTGGAAGTGCATAACCCTGAAGGCGGAGAAGATGAGATCAGTAATTTACCTGATTCCATTCTTCTTCACATTCTTTCATATCTTCCTACCAGAGATGTTGTGGGCACATGTATACTTTCAACAAGGTGGAAGAATCTTTGGACTTGTGTTGAAAACATTGACTTTGATGACTCATTTCTCTACTCAAGTAGGGTTTTTGGTTATCCGATGAAGGTCACTAGTTTCATGCACCTTGTTCACAGATTTCTTCAACTTCGAGAAAAATCAGTCATAAAAAAGTTTCGCCTTTCCTGCCGTGTTTGCTTCAGTGCCTCTCATGTATGTTCATGGCTTTCAACTGTTATTAGGCATAATGTTCAAGATCTTGATCTCTGTCTTTTTGTAGAAGAACCTTTTATGTTGCTTCAATGTGTTTCCAGTTGCAAGACACTTACTTCTCTAAAACTTGAAATGAATTGTGTTCTGGAACTACCTACTAGTACTTATTTTCCTTTCCTCAAAATCTTGCACCTATGTCTTGTCACATTTCGA</genome_strand>
        <mrna_strand>ACACAGAGTTGGGATGGTCGTGTTCAGTACTTCTCCGATGATCAAATTTCGCCGGTAACGAAGGTTACAGGTCGCCGTGGTTCCATATTTACTGTCTACTTTTGCAACCAAAAGCTTCGGTCTCCGAGTTCTCTTTCCTCAAATGGTCACTGTCGTTTCTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTAGGTGGCACACAATTAACAGCTTCAAACGGCATACTACTTTGGAAGTGCATAACCCTGAAGGCGGAGAAGATGAGATCAGTAATTTACCTGATTCCATTCTTCTTCACATTCTTTCATATCTTCCTACCAGAGATGTTGTGGGCACATGTATACTTTCAACAAGGTGGAAGAATCTTTGGACTTGTGTTGAAAACATTGACTTTGATGACTCATTTCTCTACTCAAGTAGGGTTTTTGGTTATCCGATGAAGGTCACTAGTTTCATGCACCTTGTTCACAGATTTCTTCAACTTCGAGAAAAATCAGTCATAAAAAAGTTTCGCCTTTCCTGCCGTGTTTGCTTCAGTGCCTCTCATGTATGTTCATGGCTTTCAACTGTTATTAGGCATAATGTTCAAGATCTTGATCTCTGTCTTTTTGTANAANAACTTTTTATGTTGCCTCAATGTGTTTCCAGTTGCAAGACACTTACTTCTCTAAAACTTGAAATGAATTGTGTTCTGGAACTACCTACTANTACTTATTTTCCTTTCCNCAAAATCNNGCANCTATGTCTTGNCNCATTTCNA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U602673" ref_strand="+" ref_description="SGN-U602673 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gtatgataagagaaatcaaattgcttttcgtgctgttgagctctttagaaggctacacaagattagtgctgcgagaatatctagctaggctattgaagttattactaacaagacgtaaattagctacagtacatcacagtctagaatgttgaatgtctaaatatgcagtactgatgtcttctcatttttccttttctgagatcccaccttgttgcttggcaaagtctctcttcatcgcagatatagagaaagatcgacttccagtattttatagcttgacacatttggagttgagtctggaacttgaaaatcatttcattggaccattgatggaactgctccaatgtctgccaaagttgcaatcacttcatttttctgagggacttgaccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="+" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="11731" stop="12719"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12031" g_stop="12410" g_length="380"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="380" r_length="380" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12411" i_stop="12492" i_length="82">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12493" g_stop="12503" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="381" r_stop="391" r_length="11" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="+" ref_id="SGN-U602673" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>391</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U602673" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12031" e_stop="12410"/>
          <exon e_start="12493" e_stop="12503"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTATGAGAAGAGAAATCAAATTGCTTTTCGTGCTGTTGAGCTCTTTAGAGGGCTACACAAGATTAGTGCTGCGAGAATATCTAGCAGGGCTATTGAGGTAATTACTAACAAGACGTAAATTAGCTACAGTACATCACAGTCTAGAATGTTGAATGTCTAAATATGCAGTACTGATGTCTTCTCATTTTTCCTTTTCTGTGATCCCACCTTGTTGCTTGGCAAAGTCTCTCTTCATCGCAGATATAGAGAAAGATCGACTTCCAGTATTTTATAGCTTGACACATTTGGAGTTGAGTATGGAACTTGAAAATCATTCCATTGGACCATTGATGGAACTGCTCCAATGTCTGCCAAAGTTGCAATCACTTCATTTTTCTGAGGTAGATACCTTTGGCATTATGGACTTGTTTATAAAAGAATTTCAATTCACTTGAGTTCTTTTCTATTTTTGACACCATTCAGGGACTTGACCC</genome_strand>
        <mrna_strand>GTATGATAAGAGAAATCAAATTGCTTTTCGTGCTGTTGAGCTCTTTAGAAGGCTACACAAGATTAGTGCTGCGAGAATATCTAGCTAGGCTATTGAAGTTATTACTAACAAGACGTAAATTAGCTACAGTACATCACAGTCTAGAATGTTGAATGTCTAAATATGCAGTACTGATGTCTTCTCATTTTTCCTTTTCTGAGATCCCACCTTGTTGCTTGGCAAAGTCTCTCTTCATCGCAGATATAGAGAAAGATCGACTTCCAGTATTTTATAGCTTGACACATTTGGAGTTGAGTCTGGAACTTGAAAATCATTTCATTGGACCATTGATGGAACTGCTCCAATGTCTGCCAAAGTTGCAATCACTTCATTTTTCTGAG..................................................................................GGACTTGACCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U581521" ref_strand="+" ref_description="SGN-U581521 Tomato 200607#2 [25 ESTs aligned] (*GB) gi|2997591|gb|AAC08525.1| (e_value=3e-134) glucose-6-phosphate/phosphate-translocator precursor [Pisum sativum]; (*ATH) AT5G54800.1 (e_value=4e-135) | Symbol: None | glucose-6-phosphate/phosphate translocator, putative, identical to glucose 6 phosphate/phosphate translocator (Arabidopsis thaliana) gi:7229675:gb:AAF42936 | chr5:22278497-22281111 FORWARD | Aliases: MBG8.6, MBG8_6; (*SWP) sp|Q9M5A9|GPT1_ARATH (e_value=4e-134) Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1; ">
      <seq>ccaccctagtttttttctgctatttcaacatacactttcttccataaattcttgttttttgtatacataaaaaaaaaaaacttgttttgtggatcatcacatcacatgtttgatcttgttttacactgagatttcaatatttttctctgtgtttatatcacacaagtagatctccttctcacttacacagagtgcacatggtttttcaggctctttctacgtagacggagccgtgaagagaaaccttttttttttttcttttcttttcaagttttctgtaaaatcttgatctggggttttggggttttttgtgtttttgatcttataataaaaaaaagttttaatttttagtcaaaacccatctgaattttcgcttgccagctcaaaggattttgaaccatgatgtctacagtgaagcaagcagcttttacaatcaatgggtgtgatttcattcggtcaaagtctcaatctttggcttctacacgccgtatctctctacttccgccattaccggcgatgaagtctcgccggagctccggtgtatcggtgtcgaagcctgtttttgtttcttctgttgagagttttgggggtttgaagagatctaatgagaaaactgatagtggtttggttaagtgtaaggcttatgaagcggatcgggctgagccgatggaaggacctgaatcgaaagcggagttggcaaggaagatgaagatcggtgtttattttgctacttggtggtttttgaatgtgatttttaatatttataataagaaagtgttgaatgcttttccatttccttggttaacatcaactttgtcacttgctgctggttcacttattatgttgatttcttggactcttagaattgcagaagctcctaaaactgatcttgaattctggaaaactctcttaccggttgccattgcacatacaattgggcatgtggcagctacagtgagcatgtcaaaggtggcagtttcattcactcacatcatcaagagtggtgaacctgcttttagtgttttggtttcaaggttcctcttgggagagtcattccctaccgccgtttacttatctcttatccccatcatcggtggttgtggtctttctgcgcttacagagttgaacttcaactggattggtttctcgggtgctatgatctcgaatgtggcatttgtcttcagaaatatattctccaagaagggtatgaaggggaagtctgttagtgggatgaactactatgcttgcttgtctatgctgtctttgttgattctcacaccatttgccattgctgttgagggaccacaaatgtgggctctaggatttgaaaaggctgtctctcaaatcggtccccagatcgtctggtggatggcggcccagagtgtattttatcacctctacaatcaagtttcgtacatgtctttggatgagatctctcctttgacgtttagtattggaaacaccatgaaacgtatatcagtaatcgtctcttccatcattatcttccgtacacccgtccagccagtcaacgctcttggagctgccattgcgattcttggaactttcttgtactcacaggcaaaacaatgaagagtggggatttgcataccgcgttagggataaaagacgttgaagagaaccttgaggtgttgcgaatgacgtctctcaggatcctcagtctacccttactttgggttgagtatgaaacttatgaagtatgtagatagcaataatgggttaaaattaactcaaatcctatagagttactaaggctggtttccctgttttgttattattattcgtagagacatcaacaagtgtactaataaactgaatacttggttgagagtggtataaattagttcatttaaacaaaaaaaaaaaaaaaaaatctcgacctcgtcccgattcggcacgaggcagttttctcgcgtttttatcaagttcaccagatcagatcatggctttgaaggaggaatttgaagcccacgctgagaaagctaaggcattgcttgagagtcccaccaatgagaccaagcttattcttttcggactttacaagcaagccactattggcaatgtcaacacaagccgtcctggcattttcaccctgagagacagagcaaagtgggatgcatggaaggctgttgaaggaaaatccaccgatgaagccatgaacgactacatcaccaaggtgaaacagttgctggaagaaggtgctgcttcagcataaggctcatctatctatgttgttaaattgttattggaattggattatgtggcttgtttgattttagtgtaacagcaaggtgtatgccttttcctggcttgaagggaaaattactgctataagcatgtctgaccct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="+" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="17848" stop="82971"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18148" g_stop="19061" g_length="914"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="915" r_length="915" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19062" i_stop="19939" i_length="878">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19940" g_stop="20165" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="916" r_stop="1141" r_length="226" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="20166" i_stop="20754" i_length="589">
            <donor d_prob="0.874" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="20755" g_stop="20977" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="1142" r_stop="1364" r_length="223" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="20978" i_stop="21759" i_length="782">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="21760" g_stop="21973" g_length="214"/>
          <reference_exon_boundary r_type="cDNA" r_start="1365" r_stop="1578" r_length="214" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="21974" i_stop="22225" i_length="252">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="22226" g_stop="22521" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="1579" r_stop="1874" r_length="296" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="22522" i_stop="24056" i_length="1535">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.60"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="24057" g_stop="24181" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="1875" r_stop="1993" r_length="119" r_score="0.544"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="24182" i_stop="25571" i_length="1390">
            <donor d_prob="0.883" d_score="0.49"/>
            <acceptor a_prob="0.598" a_score="0.59"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="25572" g_stop="25629" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1994" r_stop="2050" r_length="57" r_score="0.552"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="25630" i_stop="26145" i_length="516">
            <donor d_prob="0.102" d_score="0.55"/>
            <acceptor a_prob="0.785" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="26146" g_stop="26152" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="2051" r_stop="2057" r_length="7" r_score="0.714"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="26153" i_stop="26640" i_length="488">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.560" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="26641" g_stop="26666" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="2058" r_stop="2081" r_length="24" r_score="0.538"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="26667" i_stop="26913" i_length="247">
            <donor d_prob="0.256" d_score="0.00"/>
            <acceptor a_prob="0.926" a_score="0.54"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="26914" g_stop="26965" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="2082" r_stop="2129" r_length="48" r_score="0.538"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="26966" i_stop="27378" i_length="413">
            <donor d_prob="0.710" d_score="0.54"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="27379" g_stop="27403" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="2130" r_stop="2155" r_length="26" r_score="0.640"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="27404" i_stop="29227" i_length="1824">
            <donor d_prob="0.500" d_score="0.00"/>
            <acceptor a_prob="0.424" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="29228" g_stop="29250" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="2156" r_stop="2176" r_length="21" r_score="0.522"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="29251" i_stop="31442" i_length="2192">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.995" a_score="0.56"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="31443" g_stop="31497" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="2177" r_stop="2227" r_length="51" r_score="0.527"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="31498" i_stop="34273" i_length="2776">
            <donor d_prob="0.970" d_score="0.52"/>
            <acceptor a_prob="0.988" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="34274" g_stop="34282" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="2228" r_stop="2236" r_length="9" r_score="0.778"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="34283" i_stop="35455" i_length="1173">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.60"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="35456" g_stop="35589" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="2237" r_stop="2366" r_length="130" r_score="0.600"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="+" ref_id="SGN-U581521" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>2387</cumulative_length_of_scored_exons>
        <coverage percentage="1.009" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U581521" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18148" e_stop="19061"/>
          <exon e_start="19940" e_stop="20165"/>
          <exon e_start="20755" e_stop="20977"/>
          <exon e_start="21760" e_stop="21973"/>
          <exon e_start="22226" e_stop="22521"/>
          <exon e_start="24057" e_stop="24181"/>
          <exon e_start="25572" e_stop="25629"/>
          <exon e_start="26146" e_stop="26152"/>
          <exon e_start="26641" e_stop="26666"/>
          <exon e_start="26914" e_stop="26965"/>
          <exon e_start="27379" e_stop="27403"/>
          <exon e_start="29228" e_stop="29250"/>
          <exon e_start="31443" e_stop="31497"/>
          <exon e_start="34274" e_stop="34282"/>
          <exon e_start="35456" e_stop="35589"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCACCCTAGTTTTTTTCTGCTATTTCAACATACACTTTCTTCCATAAATTCTTGTTTTTTGTATACATAAAAAAAAAAAACTTGTTTTGTGGATCATCACATCACATGTTTGATCTTGTTTTACACTGAGATTTCAATATTTTTCTCTGTGTTTATATCACACAAGTAGATCTCCTTCTCACTTACACAGAGTGCACATGGTTTTTCAGGCTCTTTCTACGTAGACGGAGCCGTGAAGAGAAACC-TTTTTTTTTTTCTTTTCTTTTCAAGTTTTCTGTAAAATCTTGATCTGGGGTTTTGGGGTTTTTTGTGTTTTTGATCTTATAATAAAAAAAAGTTTTAATTTTTAGTCAAAACCCATCTGAATTTTCGCTTGCCAGCTCAAAGGATTTTGAACCATGATGTCTACAGTGAAGCAAGCAGCTTTTACAATCAATGGGTGTGATTTCATTCGGTCAAAGTCTCAATCTTTGGCTTCTACACGCCGTATCTCTCTACTTCCGCCATTACCGGCGATGAAGTCTCGCCGGAGCTCCGGTGTATCGGTGTCGAAGCCTGTTTTTGTTTCTTCTGTTGAGAGTTTTGGGGGTTTGAAGAGATCTAATGAGAAAACTGATAGTGGTTTGGTTAAGTGTAAGGCTTATGAAGCGGATCGGGCTGAGCCGATGGAAGGACCTGAATCGAAAGCGGAGTTGGCAAGGAAGATGAAGATCGGTGTTTATTTTGCTACTTGGTGGTTTTTGAATGTGATTTTTAATATTTATAATAAGAAAGTGTTGAATGCTTTTCCATTTCCTTGGTTAACATCAACTTTGTCACTTGCTGCTGGTTCACTTATTATGTTGATTTCTTGGACTCTTAGAATTGCAGAAGCTCCTAAAACTGATCTTGAATTCTGGAAAACTCTCTTACCGGTAAGGAAAATTGAGTTTTTAGGATACCCAATTGAATAAAGATCACAACTTTTTGCATTTTTTATGTTTCTGGACATAATTTTGATGTTTTATGCTTGTAATTAGGTTGGTTTTGGTTCTTGTGATCTGTTCTGTAGTGTTTGGTTCTCCAGGGATCTAGTCTATGGTGGTTGTGATATTGAAATTTTTACCTGCTATAGATCTTGGGTTTAGTTTTTAGGGGTTCTGAGATATATTTACCAACATAGTACCTATATTTGATTTTGATTTTGTTTGGATTTAATGTTGAGAGAAATGTTTTCTGGGTTTGGTGACAGAGAACACAAAACAACAAAAGGTGTTGGTTTTGAAGTACACAACAATTGTTTTATGAAAACAAAGTTTTGTTTTTTTGTGGATGAAAGCCATAAGAGACCTTCAATCCTAAGTGATTTAGTTTCTCCTTCGTTTCTGTGGACATGCACACAGACTAGCTTCGATACTGTCATTGTCTGAGAAAAGTTTTGTATTTTTGTGGATGAAAACTGTAAGACCTTCAATGCTAAGTGATTTGTTTTTTACTTTGTTTCGGTGGTCAGAGTTATTTGATACATGTGTTAGTGTGAGGTAGCACGTAGATGTGCACACAGACTAGATTGGATACTATCATTATCTAAAAAAAGTTTGTATTTTTATGGATGGAAACGACAAGAGACCTTCATGTTTAGTGATTTCTTTTCTTCAGTTTTGTGGTCAAAGTTATTTGATACATGTACTAGTGTGAATAGCATGTAGACGTGCACAGTCTAGCTTGGAACTATAATTATCTGAAAAGTGTTGTTTTTTAGTGCTGAACAGAGTCTTAATCACTCTTTGTTTTCTTCCTGTTTTGTTTCTAGGTTGCCATTGCACATACAATTGGGCATGTTGCAGCTACAGTGAGCATGTCAAAGGTGGCAGTTTCATTCACTCACATCATCAAGAGTGGTGAACCTGCTTTTAGTGTTTTGGTTTCAAGGTTCCTCTTGGGAGAGTCATTCCCTACCGCCGTTTACTTATCTCTTATCCCCATCATCGGTGGTTGTGGTCTTTCTGCGCTTACAGAGTTGAACTTCAACTGGATTGGTAATTAGTTAACTTTAACTAGTTGTTAAGACTTAAAGTTCCCCCATCATTTGTGTTGATTCTCTTGCCTGCCGCATGGTAAGCCATTTTTAAATGTCATTATACTTCTATACACAGAACTCTATGGAATTTTGATGGCAAATCATTGGTAGTATAAGAGGATAATACTCCTAGCTGTAAGGCTGTACACGATATGATATGTTCTTTTTTCAAAATTTCCATGAAAATAAAACATCTTTTGGTAACCAAATATCACAATTGACTTGTTCATGGAACACATAATTCCAGGAAATGACCCTTTCTGAGGGTAATTTGGGCTTCTCGAGTTTGGTAATTCTTCAGTTAATGGAAGGATTGTTATGTGATGCATTCAATCACTTGATATTTCTTAGAGACCTTCCATATGAATGAAATTGTATCTGAGTTTTTACTAGGATGATCTGTTTTTTTTTTGTTTAATCAGGGGTAGTGGCATTGACATGTAGTGATGTCTTTGACAATTAAGTTGGTCTTGAGTGTTGAGCACAACTTTACTTATGAATTTGTTTGCTGATGATTTTATCTGGTTTTGTTGGTTTGTCCACGTTAGGTTTCTCGGGTGCTATGATCTCGAATGTGGCATTTGTCTTCAGAAATATATTCTCCAAGAAGGGTATGAAGGGGAAGTCTGTTAGTGGGATGAACTACTATGCTTGCTTGTCTATGCTGTCTTTGTTGATTCTCACACCATTTGCCATTGCTGTTGAGGGACCACAAATGTGGGCTCTAGGATTTGAAAAGGCTGTCTCTCAAATCGGTCCCCAGATCGTCTGGTAATCACATGACTGCCATCCTATCTGTTTTTTTACATTTTGTGTCATCAGTACTTTGCCGTAAATGGCTCCGGTCAAATAATACCCCCTCCCTTACGCTTCATGTGGCAAGGTTGAGCGTACGAGGGTTGAAGTATTCAATTATTTAAGCTTTTGGAAATAAAATTTACATATTTGGAAACTTTTATATGTCATAATAGGTGATGAATCAAACTATTTAAGAAAGGTGTGGTCATGGAAACAAAGAGTGTACTAATGTTGTCACTTAAACTGAAACAAAGAGTGTACTACATTTGACTAGAGTAACTTTAATCATTTTAGAGATTTATATGTAAATTGAAAATGTAGAGAACTTTTAGTGCTAGAGAAAACTAGGTTTATCAATATTATGTAACATGCTTAAATAGAGCCACACTTGAGATTGAGGCGTTTGTCATCGTTATTGATTCCCGTAAGTTGTTCTGGTGTAAGAGCACTTCATCTGAATTTTAGTACTCATAGAATTTGTACACCACTTAACACTAGCTTAGCTTTCCCTTGTCTCAATCTATTTCAGATCGCCCCTTACTTCCTCGTACTATCTTAATGTGCCTGCTCCGTCCTCCTTTGACAAAAGATAATGCGGGCTCTTCAAGTCCAGCCCTAGAAGTGAGAATTGTGTGTGAGCGCATTGCTTCATCTTAATTTTACTACTCGTAGAACAATTTAACGCACTAGTTGTGTAAAGAGTAACTGATATGTGAGCGAGTGAAATTGGTACTAAGAATGTTTATTGATAACAGGTGGATGGCGGCCCAGAGTGTATTTTATCACCTCTACAATCAAGTTTCGTACATGTCTTTGGATGAGATCTCTCCTTTGACGTTTAGTATTGGAAACACCATGAAACGTATATCAGTAATCGTCTCTTCCATCATTATCTTCCGTACACCCGTCCAGCCAGTCAACGCTCTTGGAGCTGCCATTGCGATTCTTGGAACTTTCTTGTACTCACAGGTGATAATTTCATTTTTTGCCTTTTTGTATCAGTTCTGATAATTGATTGTTCTTTCCTTGATATATATAAACTTCGAAAATCTTTAGCTTTTTCCACTTGAAGGAGTTTTCTCCGTAACTTTTGTCATTGTAAACACGAAAATATTGGAATGATATGTTACCAACTAGCTTGGGAGTTTTTTGTTTGTTTGTTTGTTTATCATTTTCATTGCTAGTCTCTAATAAACCTAAAACTCTTTGAATGTTATGCAGGCAAAACAATGAAGAGTGGGGATTTGCATACCGCGTTAGGGATAAAAGACGTTGAAGAGAACCTTGAGGTGTTGCGAATGACGTCTCTCAGGATCCTCAGTCTACCCTTACTTTGGGTTGAGTATGAAACTTATGAAGTATGTAGATAGCAATAATGGGTTAAAATTAACTCAAATCCTATAGAGTTACTAAGGCTGGTTTCCCTGTTTTGTTATTATTATTCGTAGAGACATCAACAAGTGTACTAATAAACTGAATACTTGGTTGAGAGTGGTATAAATTAGTTCATTTAAACACACATTTGGTTAATAAACCTCCCAGAATTTGGCTCAAATAAACAGCATGCCTAAATTAGCGATACATGTTTGACATTGATCGATCAGAGGACCGATTAAAGTGAAATTTTGTGGACCGATTAACGATCAATAGAACTGGGTTCTGGGTTCATGAATCTACAGCTCTAACAAGACATCTTTATTTAACTTACAAAATTCGTTTCTGCTATAAAACAGAAAAGTTACCTTTAAAGTACAGATAACTCTTTGGGACAAGTGTTACGAACTTTTCCATCAAACCTTCAAATATTTAATAGCAGTCTGAACATCTTTATCGCCTCTACCGCTGCAGTTGAGCACGACCTTAGTTCCATTTGCTAGAGTTGGACACAGCTTCTCTAAGTAGGCGAGAGCATGAGATGTTTCCAGAGCGGGGATGATACCCTCTAACCGAGATAACCTTTTGAAGGCTGCAAACATGAGGCATTACGTGAAACAACAAACAGGTTTGTAAGATGCATCATGAAAATGCAGCAAAAGTGAAAGACAGTTACAAACTAGAAAATAATATGTAAAAGTTTAGAACAAAGAATAAGTGAGAAATCATTTATCACCTTCCAAAGCCTCCTCATCTGTGATGCTATAATATTCTGCTCTACCGAGATCTTTCAAAAAGCTGTGTTCTGGCCCAACTCCTGGGTAATCCAATCTAATAAATCCATTGGGGGAACAAAACCAGTTAAGAGATACAATGATTTGATTTGACCAAATACACTTTATTTCAGTAGCGTCAAGTGTATGCATAGGATTTTGTAGTAGCACACAAAATGAGCACATTAGTAACAAGCAAGGTTCAAGTTATTACCCGGCACTGATAGAATGAGGCTCAACAATCTGCCCATCTTCGTCTTGCAGTAGATAACTCATAGCTCCATGCAGTACTCCTACCTCACCCTTTGTCAAAGTGGCGGCATGTTTACTACTATCTAGACCAAAACCTGCTGCTTCAACCCCAATCAACCTCACATCTTTGTCATCAACAAACTCATGAAAGAGTCCCATAGCATTTGAACCTCCACCAACACATGCAACAAGCACGTCTGGTTTCCCGCCCCACTTTTCCAATGATTGCTTCCTTGTTTCTTTACCAATCACTGCATGGAACTCCCTAACCATCATGGGGTAAGGGTGTGGTCCTGCAACAGATCCAAGTATGTAGTGAGTTGTTTCAACATTTGTAACCCAATCCCTTATAGCTTCTGAAGTAGCATCCTTGAGAGTAGCAGTTCCAGAGTGGACTGCTCTAACCTGCAATGTTAATTTTGGAGATGTAATTAAGTACAGTGATTCAAATCCAATAGAAAGATCTCTTACAAAGTATAACATAAAATTATGTAACTTATCCCAAGAATAAGAGGGGAAAAAGAAGAAGCTTAACCATTTAAAGGGACATATATAATAGAAGAAAGGCGATGGTTCAGCAAACCACGGTCCTCAAGCCCTAAATAGAATTCTAAATGGTCTTCAGATCAAAATAGAGGCAAGGTAATATTTTCAAAAAAAAAAAAAAGAATATAGAGGCAGTGTAGGTAATGCAAAACAAGAAAATTTCCCGGCAACTTCTCACTTTGCAAATATTTGACTGATTCATGGATTTTAA-TAAGATTGCCCCTCCCCGTCTGTATACATCTTATCCTACTCCCTAAGTTCATGGATATCATTATTCATATCACATTCTGTTCTCCCCATTAACCAATATTTTGCACTCAACCTTTTGTTCCTGTACCTATGGACCACACTTACTAATCATTCCTGCAATTGAGAATTTATGAATATGCGAAAAACACAGTACATTTACAGCGAAATTCATCTGTGGAACGTAGGGAAGAAGAAACCACAGGATTTTACTGAACAAGTTGATGTTATTGCAGATAACCCAGTCAATTATTAGAAGGTGCAGAAATCTTAGTGAAACCATAAAGTTAATCAGTGGATATTTAATTAATTTTCAATCTCTCCTCAAGTAAGCTATGATCAGAGTGGTCAATTTATACTGTATCATACAGACCTCAGCTCCAAGCAGTCGCATTCTGAAGACATTCAATGCTTGCCTCTCCATATCTTGAGCACCCATATAAATAACACAGTCCAAACCAAACCGAGCACAAACAGTTGCAGTGGCAACACCATGCTGACCAGCCCCTGTCTCGGCAATAATGCGTTTCTTTCCCAAGCGCTTGGCAAGCAAAGCTTGCGCAACAGCATTATTGATTTTGTGGGCACCCGTGTGGTTTAAATCTTCTCTCTTCAGGTAGATCATTGGCCCTTCACCATCTGGACGTTTATAATGCTCAGTAAGTCGCTCAGCAAAATAAAGAGGGCTCTCTCTGCCAACATAATCTCTTAATATCCCATCTAGTTCCTTCTGCAGTCAGCATAAATGGTGTACAAAAGAGTTAAAAGTTTTATAGCGGTCAACAATTCTTCACAATGCCATACAATTGAAATTAATCAATCCATCAGTGATGCCTCAATTCCATAACAGTTTTGCAATCCAGCTTCTGAATCATCTATATCCCTTTCTATCTATTCAAGTCCATTTCATTCAAAAGACAACATAATTTCTCGTATTATTAAGATTAGGAGTTTGTTAAGAGAATTTATTTTTGATAAGATAACATAATTTTATTGATGTTGCGGACAGCAATATTTACACGTGATATACCAAAAATCAGAGACCAAGCAGGGTATTACGAGCATAAAGCTCATAAGTCATAACTACAGCTCTTTATATTGGAAAAAAAACTTGAATTGAGCTAAATTTCCAACAAAATTATAGCTCCTGCAGTTTCCAAAGAAATTATGCTCAAAGAAGATACTATCATTTACTTAAAACACGCACGCGCACACAGAGAATTTGCAGTTTAAGCTAACCTACTCAGTTATTTCAGCTTGTTAACAAACACAGACTACGAATATCATAAGATACTAGTCAACTAGTTTCATCATTTCATGATTGAATAACAAAAGAAGTTTTTTTTTTTATTAATTTCACTCTACATATTTCGAAGGCTAAAAGTAAAGC-CTGCAGTAATGTCCGATCAATCAGATCCGCTCTTATTACAGAATGCTGAATGCACGTCAAAAAACACCAATATCAACTAATCTCAAATCCTAAAGTTAGCAAAAATGGATTCTGGATTTGAAGTTTACGAGTTTCGATAACAATTTTAAGTTGATATACAATAATAAATGCTTTCACAATGAAATATCAAAGAAATCTTCTTAATATACGTGCTAGTTCCTCCAATGTAGTTTAGCTAAACTATATATATATATATATATCCTTCACAATTCATATATCCATTTTATTCAAATAATTGAAATGAAACAAAATCACCAATCGGAGAATGCAGTAAATCAAACACCTGAAAGTCCTGGTCTGTAGCGAGCGAATTGAAGGCGGTTTCCAGCTCATCAAGAGCGTGCATTAGAGTTTCCGGTACATACTTACCGCCGAACTTTCCAAACCGACCAAACGAATCGGGTCGTTGAACGGCGGTGGCATCCATTGATTTTCCGGTGAGGACACAAGCTATGGCAGGTGGTTTAGTGGGTAATGACGTAATTTTGATGAATTTGAAGGGTATTTGCGATTGAGATAAGGAGGAGAAACGGTGAGGCTTCGGTAGCGGTGGAGCTATTTTGCTCGGTGAGGAGAAGGCCATGTTTGGATGATTTGTGAAAATTAAGCAAATCTAGAATTTTTGTTTTTTTAATGACAGCTCTATAAAAGGTCAGTGGGACCCAACAAAAATGACGTGGCTGATTCTGCGGGATGGACGTTCGATTATTCGATTTGATTCTTTTATATAAACATAAAAAAAATGTGAGAAAGCATAAATATACTTTCGAACAATCGTTAAACGGTATGCAGGTATCTTCTATTATACTTTTGGAACATTGGTGTTCGTCCAAAATCTAGAGTATATATATCTTTTATACTAACAGACATACACGTGTCATAATCTTATCCATTCACCGATATTTATTAAATATTGAATCGACGGATAAAATTGCACCCCGTGTCCCTATTTAGTCTTCCGTAAGAGTAAATGACATGTTTACTTTAGTTTTCAGATGAAAAGGGCACTAATGTCTCAAAAGTATGACAAAGGATATCTACATATTATTTACGATAATTCAAAGGTATATTTGTCATTTTCCCTAAAAATTTATTTCGAGAAAAAAATCAAATAGTTATAATGAATCGATGTTATAAAGTGATCCGATTGTCTTTTTTTTTTTCCCTTTGTTAAATATGTTATATATTTGAATGAGGATATCTAACTTAACTTAAATTAGAATAAAGTTTATTCAACAATCATCAAATTTTTTAATCTTATATCGAAGGCAAGATAATCTCGATAACCTGATTTTGAACCAAACGACCCGGAAAAGAATTGTTTGTTCACCATTCTGAAATCTCACTAAACTTTTCTTCATATATTCTACGAAATACAAGAGCCCTTTGACATGGAAAGGTAAAACATCGAGACTTTATCATCAACCTTGATTCCGCTACGTTTCAAATAACAAAGGTGAAAAGGAAATGCAAATATTACATGTTAATGAATTCACTACTCCCCCTTGTATATACAACATGATGTAAGAAGAACTAGAAGTCAATAATTGGTTCACCAATAGTAAGATTCCTCTTGACAGACCAAGGCAAGTTAAAGAGCTTTGCCATTATGAACTTAAAGATCTTATTCACATTGATGTTATGTGTTGAACTTGAGAAAAAAAGTGTTGCTTTCATTGCCTTTGCATATGTCCTTGCCTGCAATACACCAATGTGCCACATGCTTATTATACGAGATG-ACGGAATGCAATGGAATGAGTCAGTACTCAGTATGTTCAGAACAATTGTTGTCTTGTTATACGTATACATAGTTCGAGCTGAAATGATGATTCTAATATCGTTATATCTTACCTACTGCTTTTGGTTTGTTGGGGGGTGGGTGGACTCTGTGGTAGGGGACTGGAAGATGACAATAACTAACCCAAAAGACTAGTTCCTTTCATCTTCTTTAGTATTTATAACCAAATTATATTTTTCACATTCTTTTGAAAACGAAGTTTGAAACTAAAGCAGGAAAATTCGGTTGATAATGCAAATACCATCCCAATATATGTAGAAATAAACATTTGAGGAACTTGTTAGGATCACATCGCTTTCCTACTTGCACAAAGTAAACGTGTACAAACATGACGAAAAATGGTCTTTAATGATATGACTAGGAATTTACCACGACTGAGATGATAACATATATTAATTGATCACGATTAGTGATAAGAGGTTCTTTGAACCAAGGTTAAAGTTTGCATACACTCTACCCTCCCGAACCCCACTTAGTGGGACTGCACTGTGTATGTTAGTTGTTGTTGATTAGTGATAAGAGGTTCTTTGAACCAAGGTTAAAGTTTGCATACACTCTACCCTCCCGAACCCCACTTAGTGGGACTGCACTATGTATGTTAGTTGTTGTTGATTAGTGATAAAAGGCTTAAAATGCCATTTAGGAGAAGGAATGAAGGAACCATTTAAGTAAATTACGTTGATCAGAATTGTACCTGTGTCACCACAGACCATTGAATGTCTGGCGGAAGCTGAACAAAATCATCAAATTTGGTCCCAATTAGTATTGGAATAGCAGTCTGCAATTGTCAAGGATCAGACTTCATTAGCTTCGCTAACAATGTTTTAAATTCTATAGATCATATATTATAAATGTTAATCCATCCATCATTATCAAGAACAGTATTCAACTTCATAATCTTTACCAAAATACATATTTAATCAGTTTTCATTGAAAAAGAACATCAGAACTAGTGGTGATGATCATCATGTTTGTTATTCAATTGATTTCTTTTAATAGCCGTGGTGTACGGACCAACTTGGGGACACCTCAACTAAATTCATAGGTACATACTACCTCCCTCCGGTACAACTACAAGGTAACTCTGTTTGCCGAAGTTCGGACACAGAGAGGAAATCACCTAGTGTTTGAACCCGAGACCTCATGGTTCTCAACCTCTTCATTGACCTCTAGACCGCACCTTTGAACATCGTTGTTCAATTCATTCTTCTTGAAAGTTGAAGCTAATCAAGTTTTGCTAATAACAACGTATTCTGATCATTAAGCTTCAATCATTAAAATCTAAATGAACCAACAGATAAAGTTATCATCTTCAAGAACAAAAGTAACTAAAGTACTACTTTACTTATTGCCATATCTACTTTTTATTCAAAAGAGTGAAAGCAGTTCCAACTACTGTCATTAATCAATTTATTTCAGTATATCAATAAAGTCTCAACCACTATAGTTATTTTGTTGTTTGTACTACTTTTTCTTTTATTTGGTGAAATGAATTGCTAAGTCACATCCAACTTTTTTCTTTGTTAGTAATAAGTAAAGATGATTCTTGGTTTTAAAGTTTACTCCTTTTTTCAAGAAAACAACATCAAGGTGAAAGAGAAGTTGAAGTTTCTCACCTGATTCCATTTTCTTGCTTCAGTATACCAACTTATCACACTGCAATTACAAAAAAAAACAAAAACGAAAGCTTTTAATAACGGAGTTCAACTTTTATGCACATAAGAAATACGAATAGATCTTCTTTTCTTGACAAGTTACATACTTGTTCAATGTACTCCGGCTAGTGAGATCGAAC-ATAAAGAGAATGGCAACAGAATCTTTACAAGCTATTGGAATCTGATCAAATGAGCTATGATCACCTATAAACCAAAAGTTCAAAAATTCAAGAACCGAATTAGTCGTTGCATTAATCAAGCTATAGTAACTACCTTAAAAGTGACGAATTTGGCCTAAACAAGTAAACATAATTAGCTTTCCAGATTTAGGAAGAAAATTAATGAACTTACCTCCTACATCCCATATTCTAAATGCAATTCGTGCACCTCGTACAACTAATGTTTTATCCATTAAGTTCAATCCCTTCGTCTGCAAGCACCTCTTTTCTTGTTCATCACCTACATACTTAATCTGGAAAACAAAAATTTAAAAAGTTACCAACGGTGTTGAAAAAAAACTGTTTCTTTGTTTAAGCGTAAGAAGTTTAACATTCTAACTCGACAATCAAGGGTGTGAACTCGTGATCAATAGTGGAAAATGGCCAATCGGCGTGTTTGGTCTGGTGAAAAGTACTTTCAATTTTCCCATGTTCGGTTAAACAAATTACTTAAAAATGAGGAAAATAATTTCTTGTGTGTTCCCCCACACCCCACCCCATCCCACCCCTTGATCATCCAAACCCCGCCACCTCTCAACCCCACCCCTAGATCATCCAAATCCCAGGCGCCACCTCCCAACCCCACCCTAGATCATCCAAACCCCAGATGCCACCTCCCAACCCCACCCCTAGATCATCCAAATCCCGGGTGCCACCTCCCAACCTCACCCCTAGATCATCCAAACCCCGCCACCTCCCAACCCTACCCCCTGATCATCAAAATTCCTGCCATCCCCACTCCCCACCACATTTCCACCCTGTATATTTTGCTAAATAACATATAGTTGCTCTAGGGATAATATTTTTTTTCTTACTTGCTAAACACTAGAAAATAAATAAAAGATACACTCGTTTTCCAAGAATATATTGTTTCATAGAAAGCATTTTCCTTCATACTAAACACATTAGAACACAAATTTCACTAGAAAAAAGAAAGTCCTCCAAATCTTAGTAAACCATTTTGTTGTTTGAATTTTTCAAAAATATTATCGAGATCCTTAAAAAAAACATGCTTTTTGGAGGATCCAATATAGGTATGTCAATATTTTTCGAAGGCCGGACCAACCTAGGCTCATCATCTACTCTATATGTTCGTAAATTGGCCCACACACCGGGGCGGAGCTGGAGCTTAGCCCACAAGGGATTTTTTCTATAATTCAGAATTCGTAAATTCAAAATCTTAATTCCGTAAACGTAACAAAGCAACATATTAAGCTAAACAGAGAAAATTATGTTAAACTTACCACAAAACTTGTTTTACCAATCTGACAATCACCAAAAATACTGATCTTTAAAGTAACTAAATCTGAATCACTATCATACCCACTACAAGTTGCAGTTAAAGGATCATCTTCCCCACCACCTACCCCATACCCTTCAACTTCCTCCATAGCCACCGGAGACGATGAACTTCTTCGAGACAAACGCCGGTACCTCACCGGTTTCCGTCCAGTTGAACAAACAATAATCCTTTCCCAAATAAAACGAAAAAACTCCCTAAAGATTGAAACTTTATCAAATATCTTCCACCTAATCTTGACTTGAACTATTTTCCGGCAAAGATTAGTCATTTTTTCCGGTGAAAAATCATGGGTTTTCTGAGCCATGAGGAAAATACATAAAAACTGATTCTGGGTTCCACATTTTGACAGTCTTTTTGTAGTTGGAATTATCTGTTTGGAACAATTTGTGACTTTGTGAAGACGACGACAAAGTGCTGACCGGTATATGTGTCTTTTTAGGAATGTGAAAAAGAGACGGTCCAATTTGCCGGCCGGCGTCCTGTTTTTGATGTAAACGTGGGTATATAGGTCAATTGTTAGGCACTTGCTACAATATATAGAGGTTATATGTAGGGGTAAAATGGTCATTTTCGTTAAGGGTATTTTTGGAAATGTAAATTTAGAAATTGGATTGGATGGGAGTGAAAAGAATAAAAAATTGTTGAGTTCGATTCGAGGTTTGAGTATGAAAAATATCATATTAGCGGTTTCTTTTTCCTGTCTCTTTAGTATGAGTTCATATTTAATTGGACAAAAAAAGAATTCAGAACAATCGAGTCGACTCGAGATTTGAGTATGAAAATATCATATTGATGGATTTCTTTTTTTCTTATAATTGGATAGATAAGAAGAAAAGTGAAACGAGAAACAGAGTGGGAGAAAATAAGTATCTGATAAGGTTAAAAAAATTTCTTTTAGGATAGTTCTATTAATATCGATGTAATTTGTTTATGTATTATTTTTCGATAAATTTATATATTATATTATTTAGATAAAGAGGTAAGTTATTTATAATAATATTAATATGATGTTTGGATTATAGTCTTTTTATATATATGAGAATTTATGTATGACTTTATGCCAAATATAAAATATTAACTTATAGCCATATAATTGATACTTATTCAACTAATACATCTATCATTCAACTAGCTCTAGCTGCCAAATAACCCCTTTAAAACATAATAAAAAACATTTAGAATGTTTTATCTTTCGTTCTAATTTTATCGAATGTCCTGAAGGGACAAATGTCTTATATTTCGAGTTTTAAGAATAATGAGCTTTTTTACTAAAATTATTTAATTTATAAAATATTCTTTGTTAAAAATTGATACCTAATTTATTCAGATTTTTCAATCATTTCATTCATCGTTAGATCAAAACTTTTATCGAGGCTTATAAAATTATTTCTATCCTAGATGAAATCATTCATTAGTGAACTCCCATTGGATTTTTGGAAATGTAGATTATAAATTGGATTAGATGGGGTGGAAAGAAGAATATAGAATGGTTGAGTTGGATTCAAAGTTTGATTATAAAACATTATCATATTAACAAGCACTTTTAATATAAATTCAGACTAATAAAACAGAAAAAGAATTTAAATTATCGAATCATTCAAAATTCAAATATGAAAAAGATTATATTAGCAAATATTTTATTTATAATTAGACAAATAAGGAAGAAAAGTAAAATTAGAAATAGAGAGGGAGAAAACATGTATCTAGTAAGGTAGATTAGGAATTTTTACATAATTTGACTTCTTAATTCTCAAGGTTCGAAGATAGCAAAATAATTTTTATTTATATATTAATTTTTTATAAATTAATATAGTATATATAATAAAATTTAATTTAAAAATAATTTTTTTATATATAATATTTAAGTTTATAATTTAAATTTTAACCTATTTAATTTTTTAAATCATTTTATTCACCGCTAAATCATGTCTTTCATGGAAGCTACCAAATTATTTTCTATCGTAAGATGAAAACATAAAATTATTTAACTCAAGAGAATAAATTAATGAGAAAGAGTCAAGATTTGATTGGTGGATACAGATCATAGGATATTTTAAAATTTAACATGCTGATAAAAGAATAAATAAAAAGCTGCAAAAATATCATAAGAATGACTCATACTTTTGTGCTTTTCCACAAAAGAATTTTATTTAGAATTAATAAAGTTAATTTGTGCTCTACTTTTTCCCCAGCTAATCAGGTCCATAACTTTTTTTAAGTACTTTCACTGGTGTGAATCTTGTTTTATACTTTGACAACAAATTTAAGTTTTGGTTATTCACAAATTGAGCATATTATACTTTTTACATTTCAATTTATTCCTATTACTTTTTCTTAAAAAAAAATAAATAAGTATCCTCTTGATCTATGCTTGAAATTTCACATACACACTTATACTATACTAAGGTCCTATTAATAATTTTCTACCCCTATTCAGCCTATGTGATACTAGTTTGAAAAAAAATGTCAACACATATTGGGCCCACAAGATAGTATCACGTAAGACGAAAAGGGATAGAAAATTATTTATAAAATAATTTCAGGATAATAGGACTTTCGTGTAGTATAAGTGTGTCTCTGAGATTTCGGGCATAGGTTAAGGGGGTACTTGTGCATTATTCTTCTTTTTTAGTTTTTTTCGATAATATATTAATTTCAGTATCTCATATAACATGTTTCTGATTATTCATGTGCACTACAAAAATAGTTTGAATTACATGGGAATTTTTCAAAAAAATTATTATGAAAATTCGCAGGAAATTTTTTATGGAAATTTTAATACTAATTCCTAGAAAAATTCCCATGTAATTCACGCTTTTCTTATATTGGTATTTGATTGGAACTTCTTTAAAACTTGTTCTTTAATTTAAAATTTTCTTCAATCTATATTATTGTTGTTAGCAAATCATCTACTCATATATATTTATTTAAACTTTTTTTTTCTATCTTGTGTTTGATGTCAATGTTGGAGCTTAACTAAGTTTGAATTTACGTCGAAAAGTTTTATGTTGAGGATAAAGTGTTTTCTAACAAAGACGACTTCATACTCCAAAAAACTTAAAGTCTAAACTTCTGATCAAAGATGAAGGAGTACACAAGACAAATGGACTCGTGTCCTAATTATTTGATAAATTGAAGTAATTACTTGTCTTTCAAACTTTTAACTATGATTTAAAATCAATACCTATATTTGAGTGTTATAGATTAAGGGCAAGAACGGAGCGAATATTAGATATGAAAAGTGAAATTCTGAATTCATAAACTTAATTCTGCCCTTGTCTTTTTTCTAACGACGAAAATAATCAAAATGTAGTTATAGAAAAAAAAATTAATCCTTTTCAAAAAAAAATTGTAATGAACTTTCCTATTTTCTCTTAAAATTTAGAATTATTGTATTGTAATTATAAAATTCTAGAAGGCAACACTAATTAGCTGATTAAACAGACAAATGTAGAAGTCAAATGTCTTTATCAACTTTGTAATGAATATAAAACAAGGCACAAATTAATTACGTGAGATTCCTCAATTAATCATTAAATAAAAATATATAAAAAACTAAAATATAAAATTGACTTTAGTTCACAAGTATTCTAATTATTTAAAGAAAAATATTTCATGCATATATTATTTTATAATATAATGAATAAAATTTAGGTAGAAGGCGTGACCATGAAGAATCCAACATGCCACATATCACTAATTATGTGGATAAAATTAAAACTGAAAACGACCTTCTAGCTAATTAAATTATTAATTATTTATTTTATTTACCTAAAATGAAAAAATTAATGATTTGTTAAGATTTTTTTTTTTATTTTTTGGTCATGTTTGCTACTTTCATTAATTCATTTAGGGTAATAGGGTAGGCATATTCAAACTCCCAAAATGGACTTATAAATTAAATTACCTAACTTTAGATATTATAATAAAGTCATTGTGTTAGTTGCAATGTTTGAAACTTTGAAGAATAAAAAGTTAAAAGCATAGTGGTACCAAACCTAGAAGAATGATTTATCAACAATAAATCGATGTATTATTAGAAAGATTATTTTTGTAGCTCGATAATTAATATTGATAATCTGAAAATAATAAAATACTCGATAGAATAGTTATTGTGTGTTCAAAAATTCAAATCAAATATGAATGGTTACGTGTTATTTTAAAAAAAATTTATCTCAGTGCTTCTTAAAAATTCTCAAATATATGTCTAAAATGTGTAAGAACAAATTCTTGTATTCAAACAAAATCGTTTGGTGTTTTCTTTATCTTGGTAGATATTTTGGTAATGTATATCTAATAACACAATTTCATTGCTCCTAATATATAATAATGGTTTAAATTAGGTTATATATATATATATTATATTTTATTTTTCTTGTAGTCTTTCAATCAAAGTCAAATTATTAGGCAACATTAGTTGATAAATGAAATTAATGTAGAACAAACACGTGTATACAAAACAAACAAAAAAATAAAATTTAGGTCATATACACAATCTCATCAATGGGGCTAGCCCCAATAGATATGTTTTGTAAATTTGATTGATACATCTACTTCTACTACAAATATATAAGCCGTTTTTATTACACATCTCGTGATTAATATGTTTGTATTAATTGTATGATTTTATATGATATTTAATAATTTTTATTAATAAAAATAGGATTGACGCGTCAAGATTGAGGGCTTAAAGTCAAACGATAAAGAGGGGCCTTAATATTTTTTTAATTTTTTTTCAAAATAGTATTAATAATGTATGATATATATATTTATTTAAAATCTATTTTTCTGTCTTTTTAAATATGAAAGTCATTAATTATTATTTTCTAATGAATTTGATTTAATTAATCTTTTTCATTTGATGTATATCTAATTCATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN</genome_strand>
        <mrna_strand>CCACCCTAGTTTTTTTCTGCTATTTCAACATACACTTTCTTCCATAAATTCTTGTTTTTTGTATACATAAAAAAAAAAAACTTGTTTTGTGGATCATCACATCACATGTTTGATCTTGTTTTACACTGAGATTTCAATATTTTTCTCTGTGTTTATATCACACAAGTAGATCTCCTTCTCACTTACACAGAGTGCACATGGTTTTTCAGGCTCTTTCTACGTAGACGGAGCCGTGAAGAGAAACCTTTTTTTTTTTTCTTTTCTTTTCAAGTTTTCTGTAAAATCTTGATCTGGGGTTTTGGGGTTTTTTGTGTTTTTGATCTTATAATAAAAAAAAGTTTTAATTTTTAGTCAAAACCCATCTGAATTTTCGCTTGCCAGCTCAAAGGATTTTGAACCATGATGTCTACAGTGAAGCAAGCAGCTTTTACAATCAATGGGTGTGATTTCATTCGGTCAAAGTCTCAATCTTTGGCTTCTACACGCCGTATCTCTCTACTTCCGCCATTACCGGCGATGAAGTCTCGCCGGAGCTCCGGTGTATCGGTGTCGAAGCCTGTTTTTGTTTCTTCTGTTGAGAGTTTTGGGGGTTTGAAGAGATCTAATGAGAAAACTGATAGTGGTTTGGTTAAGTGTAAGGCTTATGAAGCGGATCGGGCTGAGCCGATGGAAGGACCTGAATCGAAAGCGGAGTTGGCAAGGAAGATGAAGATCGGTGTTTATTTTGCTACTTGGTGGTTTTTGAATGTGATTTTTAATATTTATAATAAGAAAGTGTTGAATGCTTTTCCATTTCCTTGGTTAACATCAACTTTGTCACTTGCTGCTGGTTCACTTATTATGTTGATTTCTTGGACTCTTAGAATTGCAGAAGCTCCTAAAACTGATCTTGAATTCTGGAAAACTCTCTTACCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCATTGCACATACAATTGGGCATGTGGCAGCTACAGTGAGCATGTCAAAGGTGGCAGTTTCATTCACTCACATCATCAAGAGTGGTGAACCTGCTTTTAGTGTTTTGGTTTCAAGGTTCCTCTTGGGAGAGTCATTCCCTACCGCCGTTTACTTATCTCTTATCCCCATCATCGGTGGTTGTGGTCTTTCTGCGCTTACAGAGTTGAACTTCAACTGGATTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCTCGGGTGCTATGATCTCGAATGTGGCATTTGTCTTCAGAAATATATTCTCCAAGAAGGGTATGAAGGGGAAGTCTGTTAGTGGGATGAACTACTATGCTTGCTTGTCTATGCTGTCTTTGTTGATTCTCACACCATTTGCCATTGCTGTTGAGGGACCACAAATGTGGGCTCTAGGATTTGAAAAGGCTGTCTCTCAAATCGGTCCCCAGATCGTCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGATGGCGGCCCAGAGTGTATTTTATCACCTCTACAATCAAGTTTCGTACATGTCTTTGGATGAGATCTCTCCTTTGACGTTTAGTATTGGAAACACCATGAAACGTATATCAGTAATCGTCTCTTCCATCATTATCTTCCGTACACCCGTCCAGCCAGTCAACGCTCTTGGAGCTGCCATTGCGATTCTTGGAACTTTCTTGTACTCACAG............................................................................................................................................................................................................................................................GCAAAACAATGAAGAGTGGGGATTTGCATACCGCGTTAGGGATAAAAGACGTTGAAGAGAACCTTGAGGTGTTGCGAATGACGTCTCTCAGGATCCTCAGTCTACCCTTACTTTGGGTTGAGTATGAAACTTATGAAGTATGTAGATAGCAATAATGGGTTAAAATTAACTCAAATCCTATAGAGTTACTAAGGCTGGTTTCCCTGTTTTGTTATTATTATTCGTAGAGACATCAACAAGTGTACTAATAAACTGAATACTTGGTTGAGAGTGGTATAAATTAGTTCATTTAAACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAATCTCGACCTCGTCCCGATTCGGC--ACGAGGCAGTTTTCTCGCGTTTTTATCAAGTT-C-ACCAGAT--CAGA-TCATGGCTTTGAAGGAGGAATTTGAAGCCCACGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAAGCTAAGGCATTGCTTGAGAGTCCCACCAATGAGA-CCAAGCTTATT-CTTTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACTTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGCAAGCCACT-AT-TGGCAATG.......................................................................................................................................................................................................................................................TCAACACAAGC-CG-TCCTGGCATTTTCACCCTGA-GAGACAGAGCA-AAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................GGGATGCATGGAAGGCTGTTGAAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................--AAATCCACCGATGAAG-CCATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-ACGACTACATCACCAAGGTGAAACAG-TTGCTGGAAGA-AGGT-GCTGCTTCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATAAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCT-ATCTATGTTGTTAAATTG-T-TAT-TGGAATTGGATTATGTGGCTTGTTTGATTTTAGTGTAACAGCAAGGTGTATGCCTTTTCCTGGCTTGAAGGGAAAATTACTGCTATAAGCATGTCTGACCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U591914" ref_strand="+" ref_description="SGN-U591914 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|9758260|dbj|BAB08759.1| (e_value=4e-54) glucose-6-phosphate/phosphate translocator [Arabidopsis thaliana]; (*ATH) AT5G54800.1 (e_value=4e-56) | Symbol: None | glucose-6-phosphate/phosphate translocator, putative, identical to glucose 6 phosphate/phosphate translocator (Arabidopsis thaliana) gi:7229675:gb:AAF42936 | chr5:22278497-22281111 FORWARD | Aliases: MBG8.6, MBG8_6; (*SWP) sp|Q9M5A9|GPT1_ARATH (e_value=3e-55) Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1; ">
      <seq>ggttgattttttggactcttataattgcagaagctcctgaggactgatcttggattctgtgaaaactctcttaccggttgccattgcacatacaattgggcatgttgcagctacagtgagcatgtcaaaggtggcagttacattcactcacatcatcaagagtggtgaacctgcttttagtgttttggtttcaaggttcctcttgggagagtcattccctaccgccgattacttatctcttatccccatcatcggtggttgtggtctttctgcgcttacagagttgaacttcaactggattggtttctcgggtgctattatctcaaatgtggcatttgtcttcagaaatatattctccaagaaaggtatgaacgggaagtcttgtagtgggatgaactactatgcttgcttgtctatgctaggttttgttgattctcacaccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="+" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="18689" stop="21195"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18988" g_stop="19061" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="76" r_length="76" r_score="0.865"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19062" i_stop="19939" i_length="878">
            <donor d_prob="0.988" d_score="0.85"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19940" g_stop="20165" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="302" r_length="226" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="20166" i_stop="20754" i_length="589">
            <donor d_prob="0.874" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="20755" g_stop="20895" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="444" r_length="142" r_score="0.929"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="+" ref_id="SGN-U591914" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>441</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U591914" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18988" e_stop="19061"/>
          <exon e_start="19940" e_stop="20165"/>
          <exon e_start="20755" e_stop="20895"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTGATTTCTTGGACTCTTAGAATTGCAGAAGCTCCT-AAAACTGATCTTGAATTCTG-GAAAACTCTCTTACCGGTAAGGAAAATTGAGTTTTTAGGATACCCAATTGAATAAAGATCACAACTTTTTGCATTTTTTATGTTTCTGGACATAATTTTGATGTTTTATGCTTGTAATTAGGTTGGTTTTGGTTCTTGTGATCTGTTCTGTAGTGTTTGGTTCTCCAGGGATCTAGTCTATGGTGGTTGTGATATTGAAATTTTTACCTGCTATAGATCTTGGGTTTAGTTTTTAGGGGTTCTGAGATATATTTACCAACATAGTACCTATATTTGATTTTGATTTTGTTTGGATTTAATGTTGAGAGAAATGTTTTCTGGGTTTGGTGACAGAGAACACAAAACAACAAAAGGTGTTGGTTTTGAAGTACACAACAATTGTTTTATGAAAACAAAGTTTTGTTTTTTTGTGGATGAAAGCCATAAGAGACCTTCAATCCTAAGTGATTTAGTTTCTCCTTCGTTTCTGTGGACATGCACACAGACTAGCTTCGATACTGTCATTGTCTGAGAAAAGTTTTGTATTTTTGTGGATGAAAACTGTAAGACCTTCAATGCTAAGTGATTTGTTTTTTACTTTGTTTCGGTGGTCAGAGTTATTTGATACATGTGTTAGTGTGAGGTAGCACGTAGATGTGCACACAGACTAGATTGGATACTATCATTATCTAAAAAAAGTTTGTATTTTTATGGATGGAAACGACAAGAGACCTTCATGTTTAGTGATTTCTTTTCTTCAGTTTTGTGGTCAAAGTTATTTGATACATGTACTAGTGTGAATAGCATGTAGACGTGCACAGTCTAGCTTGGAACTATAATTATCTGAAAAGTGTTGTTTTTTAGTGCTGAACAGAGTCTTAATCACTCTTTGTTTTCTTCCTGTTTTGTTTCTAGGTTGCCATTGCACATACAATTGGGCATGTTGCAGCTACAGTGAGCATGTCAAAGGTGGCAGTTTCATTCACTCACATCATCAAGAGTGGTGAACCTGCTTTTAGTGTTTTGGTTTCAAGGTTCCTCTTGGGAGAGTCATTCCCTACCGCCGTTTACTTATCTCTTATCCCCATCATCGGTGGTTGTGGTCTTTCTGCGCTTACAGAGTTGAACTTCAACTGGATTGGTAATTAGTTAACTTTAACTAGTTGTTAAGACTTAAAGTTCCCCCATCATTTGTGTTGATTCTCTTGCCTGCCGCATGGTAAGCCATTTTTAAATGTCATTATACTTCTATACACAGAACTCTATGGAATTTTGATGGCAAATCATTGGTAGTATAAGAGGATAATACTCCTAGCTGTAAGGCTGTACACGATATGATATGTTCTTTTTTCAAAATTTCCATGAAAATAAAACATCTTTTGGTAACCAAATATCACAATTGACTTGTTCATGGAACACATAATTCCAGGAAATGACCCTTTCTGAGGGTAATTTGGGCTTCTCGAGTTTGGTAATTCTTCAGTTAATGGAAGGATTGTTATGTGATGCATTCAATCACTTGATATTTCTTAGAGACCTTCCATATGAATGAAATTGTATCTGAGTTTTTACTAGGATGATCTGTTTTTTTTTTGTTTAATCAGGGGTAGTGGCATTGACATGTAGTGATGTCTTTGACAATTAAGTTGGTCTTGAGTGTTGAGCACAACTTTACTTATGAATTTGTTTGCTGATGATTTTATCTGGTTTTGTTGGTTTGTCCACGTTAGGTTTCTCGGGTGCTATGATCTCGAATGTGGCATTTGTCTTCAGAAATATATTCTCCAAGAAGGGTATGAAGGGGAAGTCTGTTAGTGGGATGAACTACTATGCTTGCTTGTCTATGCT-GTCTTTGTTGATTCTCACACCAT</genome_strand>
        <mrna_strand>GGTTGATTTTTTGGACTCTTATAATTGCAGAAGCTCCTGAGGACTGATCTTGGATTCTGTGAAAACTCTCTTACCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCATTGCACATACAATTGGGCATGTTGCAGCTACAGTGAGCATGTCAAAGGTGGCAGTTACATTCACTCACATCATCAAGAGTGGTGAACCTGCTTTTAGTGTTTTGGTTTCAAGGTTCCTCTTGGGAGAGTCATTCCCTACCGCCGATTACTTATCTCTTATCCCCATCATCGGTGGTTGTGGTCTTTCTGCGCTTACAGAGTTGAACTTCAACTGGATTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCTCGGGTGCTATTATCTCAAATGTGGCATTTGTCTTCAGAAATATATTCTCCAAGAAAGGTATGAACGGGAAGTCTTGTAGTGGGATGAACTACTATGCTTGCTTGTCTATGCTAGGTTTTGTTGATTCTCACACCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U581112" ref_strand="+" ref_description="SGN-U581112 Tomato 200607#2 [11 ESTs aligned] (*GB) gi|57157621|dbj|BAD83779.1| (e_value=0) tryptophan synthase beta subunit [Polygonum tinctorium]; (*ATH) AT5G54810.1 (e_value=0) | Symbol: None | tryptophan synthase, beta subunit 1 (TSB1), identical to SP:P14671 | chr5:22281834-22284011 REVERSE | Aliases: MBG8.7, MBG8_7; (*SWP) sp|O50046|TRPB_CAMAC (e_value=0) Tryptophan synthase beta chain 2, chloroplastic OS=Camptotheca acuminata GN=TSB; ">
      <seq>ggcgattggcggccaatcggccgaattgagatttgcttaattttcacaaatcatccaaacatggccttctcctcaccgagcaaaatagctccaccgctaccgaagcctcaccgtttctcctccttatctcaatcgcaaatacccttcaaattcatcaaaattacgtcattacccactaaaccacctgccatagcttgtgtcctcaccggaaaatcaatggatgccaccgccgttcaacgacccgattcgtttggtcggtttggaaagttcggcggtaagtatgtaccggaaactctaatgcacgctcttgatgagctggaaaccgccttcaattcgctcgctacagaccaggactttcagaaggaactagatgggatattaagagattatgttggcagagagagccctctttattttgctgagcgacttactgagcattataaacgtccagatggtgaagggccaatgatctacctgaagagagaagatttaaaccacacgggtgcccacaaaatcaataatgctgttgcgcaagctttgcttgccaagcgcttgggaaagaaacgcattattgccgagacaggggctggtcagcatggtgttgccactgcaactgtttgtgctcggtttggtttggactgtgttatttatatgggtgctcaagatatggagaggcaagcattgaatgtcttcagaatgcgactgcttggagctgaggttagagcagtccactctggaactgctactctcaaggatgctacttcagaagctataagggattgggttacaaatgttgaaacaactcactacatacttggatctgttgcaggaccacacccttaccccatgatggttagggagttccatgcagtgattggtaaagaaacaaggaagcaatcattggaaaagtggggcgggaaaccagacgtgcttgttgcatgtgttggtggaggttcaaatgctatgggactctttcatgagtttgttgatgacaaagatgtgaggttgattggggttgaagcagcaggttttggtctagatagtagtaaacatgccgccactttgacaaagggtgaggtaggagtactgcatggagctatgagttatctactgcaagacgaagatgggcagattgttgagcctcattctatcagtgccggattggattacccaggagttgggccagaacacagctttttgaaagatctcggtagagcagaatattatagcatcacagatgaggaggctttggaagccttcaaaaggttatctcggttagagggtatcatccccgctctggaaacatctcatgctctcgcctacttagagaagctgtgtccaactctagcaaatggaactaaggtcgtgctcaactgcagcggtagaggcgataaagatgttcagactgctattaaatatttgaaggtttgatggaaaagttcgtaacacttgtcccaaagagttatctgtactttaaaggtaacttttctgttttatagcagaaacgaattttgtaagttaaataaagatgtcttgttagagctgtagattcatgaacccagaacccagttctattgatcgttaatcggtccacaaaatttcactttaatcggtcctctgatcgatcaatgtcaaacatgtatcgctaatttaggcatgctgtttatttgagccaaattctgggaggtttattaaccaaatgtgtgtttaaatgnnct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="-" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="26566" stop="22208"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26258" g_stop="25929" g_length="330"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="360" r_length="330" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25928" i_stop="24926" i_length="1003">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24925" g_stop="24569" g_length="357"/>
          <reference_exon_boundary r_type="cDNA" r_start="361" r_stop="717" r_length="357" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24568" i_stop="23809" i_length="760">
            <donor d_prob="0.756" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23808" g_stop="23366" g_length="443"/>
          <reference_exon_boundary r_type="cDNA" r_start="718" r_stop="1160" r_length="443" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="23365" i_stop="23210" i_length="156">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="23209" g_stop="23115" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="1161" r_stop="1255" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="23114" i_stop="22971" i_length="144">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="22970" g_stop="22508" g_length="463"/>
          <reference_exon_boundary r_type="cDNA" r_start="1256" r_stop="1718" r_length="463" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="-" ref_id="SGN-U581112" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1688</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U581112" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26258" e_stop="25929"/>
          <exon e_start="24925" e_stop="24569"/>
          <exon e_start="23808" e_stop="23366"/>
          <exon e_start="23209" e_stop="23115"/>
          <exon e_start="22970" e_stop="22508"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTGCTTAATTTTCACAAATCATCCAAACATGGCCTTCTCCTCACCGAGCAAAATAGCTCCACCGCTACCGAAGCCTCACCGTTTCTCCTCCTTATCTCAATCGCAAATACCCTTCAAATTCATCAAAATTACGTCATTACCCACTAAACCACCTGCCATAGCTTGTGTCCTCACCGGAAAATCAATGGATGCCACCGCCGTTCAACGACCCGATTCGTTTGGTCGGTTTGGAAAGTTCGGCGGTAAGTATGTACCGGAAACTCTAATGCACGCTCTTGATGAGCTGGAAACCGCCTTCAATTCGCTCGCTACAGACCAGGACTTTCAGGTGTTTGATTTACTGCATTCTCCGATTGGTGATTTTGTTTCATTTCAATTATTTGAATAAAATGGATATATGAATTGTGAAGGATATATATATATATATATAGTTTAGCTAAACTACATTGGAGGAACTAGCACGTATATTAAGAAGATTTCTTTGATATTTCATTGTGAAAGCATTTATTATTGTATATCAACTTAAAATTGTTATCGAAACTCGTAAACTTCAAATCCAGAATCCATTTTTGCTAACTTTAGGATTTGAGATTAGTTGATATTGGTGTTTTTTGACGTGCATTCAGCATTCTGTAATAAGAGCGGATCTGATTGATCGGACATTACTGCAGGCTTTACTTTTAGCCTTCGAAATATGTAGAGTGAAATTAATAAAAAAAAAAACTTCTTTTGTTATTCAATCATGAAATGATGAAACTAGTTGACTAGTATCTTATGATATTCGTAGTCTGTGTTTGTTAACAAGCTGAAATAACTGAGTAGGTTAGCTTAAACTGCAAATTCTCTGTGTGCGCGTGCGTGTTTTAAGTAAATGATAGTATCTTCTTTGAGCATAATTTCTTTGGAAACTGCAGGAGCTATAATTTTGTTGGAAATTTAGCTCAATTCAAGTTTTTTTTCCAATATAAAGAGCTGTAGTTATGACTTATGAGCTTTATGCTCGTAATACCCTGCTTGGTCTCTGATTTTTGGTATATCACGTGTAAATATTGCTGTCCGCAACATCAATAAAATTATGTTATCTTATCAAAAATAAATTCTCTTAACAAACTCCTAATCTTAATAATACGAGAAATTATGTTGTCTTTTGAATGAAATGGACTTGAATAGATAGAAAGGGATATAGATGATTCAGAAGCTGGATTGCAAAACTGTTATGGAATTGAGGCATCACTGATGGATTGATTAATTTCAATTGTATGGCATTGTGAAGAATTGTTGACCGCTATAAAACTTTTAACTCTTTTGTACACCATTTATGCTGACTGCAGAAGGAACTAGATGGGATATTAAGAGATTATGTTGGCAGAGAGAGCCCTCTTTATTTTGCTGAGCGACTTACTGAGCATTATAAACGTCCAGATGGTGAAGGGCCAATGATCTACCTGAAGAGAGAAGATTTAAACCACACGGGTGCCCACAAAATCAATAATGCTGTTGCGCAAGCTTTGCTTGCCAAGCGCTTGGGAAAGAAACGCATTATTGCCGAGACAGGGGCTGGTCAGCATGGTGTTGCCACTGCAACTGTTTGTGCTCGGTTTGGTTTGGACTGTGTTATTTATATGGGTGCTCAAGATATGGAGAGGCAAGCATTGAATGTCTTCAGAATGCGACTGCTTGGAGCTGAGGTCTGTATGATACAGTATAAATTGACCACTCTGATCATAGCTTACTTGAGGAGAGATTGAAAATTAATTAAATATCCACTGATTAACTTTATGGTTTCACTAAGATTTCTGCACCTTCTAATAATTGACTGGGTTATCTGCAATAACATCAACTTGTTCAGTAAAATCCTGTGGTTTCTTCTTCCCTACGTTCCACAGATGAATTTCGCTGTAAATGTACTGTGTTTTTCGCATATTCATAAATTCTCAATTGCAGGAATGATTAGTAAGTGTGGTCCATAGGTACAGGAACAAAAGGTTGAGTGCAAAATATTGGTTAATGGGGAGAACAGAATGTGATATGAATAATGATATCCATGAACTTAGGGAGTAGGATAAGATGTATACAGACGGGGAGGGGCAATCTTATTAAAATCCATGAATCAGTCAAATATTTGCAAAGTGAGAAGTTGCCGGGAAATTTTCTTGTTTTGCATTACCTACACTGCCTCTATATTCTTTTTTTTTTTTTTGAAAATATTACCTTGCCTCTATTTTGATCTGAAGACCATTTAGAATTCTATTTAGGGCTTGAGGACCGTGGTTTGCTGAACCATCGCCTTTCTTCTATTATATATGTCCCTTTAAATGGTTAAGCTTCTTCTTTTTCCCCTCTTATTCTTGGGATAAGTTACATAATTTTATGTTATACTTTGTAAGAGATCTTTCTATTGGATTTGAATCACTGTACTTAATTACATCTCCAAAATTAACATTGCAGGTTAGAGCAGTCCACTCTGGAACTGCTACTCTCAAGGATGCTACTTCAGAAGCTATAAGGGATTGGGTTACAAATGTTGAAACAACTCACTACATACTTGGATCTGTTGCAGGACCACACCCTTACCCCATGATGGTTAGGGAGTTCCATGCAGTGATTGGTAAAGAAACAAGGAAGCAATCATTGGAAAAGTGGGGCGGGAAACCAGACGTGCTTGTTGCATGTGTTGGTGGAGGTTCAAATGCTATGGGACTCTTTCATGAGTTTGTTGATGACAAAGATGTGAGGTTGATTGGGGTTGAAGCAGCAGGTTTTGGTCTAGATAGTAGTAAACATGCCGCCACTTTGACAAAGGGTGAGGTAGGAGTACTGCATGGAGCTATGAGTTATCTACTGCAAGACGAAGATGGGCAGATTGTTGAGCCTCATTCTATCAGTGCCGGGTAATAACTTGAACCTTGCTTGTTACTAATGTGCTCATTTTGTGTGCTACTACAAAATCCTATGCATACACTTGACGCTACTGAAATAAAGTGTATTTGGTCAAATCAAATCATTGTATCTCTTAACTGGTTTTGTTCCCCCAATGGATTTATTAGATTGGATTACCCAGGAGTTGGGCCAGAACACAGCTTTTTGAAAGATCTCGGTAGAGCAGAATATTATAGCATCACAGATGAGGAGGCTTTGGAAGGTGATAAATGATTTCTCACTTATTCTTTGTTCTAAACTTTTACATATTATTTTCTAGTTTGTAACTGTCTTTCACTTTTGCTGCATTTTCATGATGCATCTTACAAACCTGTTTGTTGTTTCACGTAATGCCTCATGTTTGCAGCCTTCAAAAGGTTATCTCGGTTAGAGGGTATCATCCCCGCTCTGGAAACATCTCATGCTCTCGCCTACTTAGAGAAGCTGTGTCCAACTCTAGCAAATGGAACTAAGGTCGTGCTCAACTGCAGCGGTAGAGGCGATAAAGATGTTCAGACTGCTATTAAATATTTGAAGGTTTGATGGAAAAGTTCGTAACACTTGTCCCAAAGAGTTATCTGTACTTTAAAGGTAACTTTTCTGTTTTATAGCAGAAACGAATTTTGTAAGTTAAATAAAGATGTCTTGTTAGAGCTGTAGATTCATGAACCCAGAACCCAGTTCTATTGATCGTTAATCGGTCCACAAAATTTCACTTTAATCGGTCCTCTGATCGATCAATGTCAAACATGTATCGCTAATTTAGGCATGCTGTTTATTTGAGCCAAATTCTGGGAGGTTTATTAACCAAATGTGTGTTTAAATGAACT</genome_strand>
        <mrna_strand>ATTTGCTTAATTTTCACAAATCATCCAAACATGGCCTTCTCCTCACCGAGCAAAATAGCTCCACCGCTACCGAAGCCTCACCGTTTCTCCTCCTTATCTCAATCGCAAATACCCTTCAAATTCATCAAAATTACGTCATTACCCACTAAACCACCTGCCATAGCTTGTGTCCTCACCGGAAAATCAATGGATGCCACCGCCGTTCAACGACCCGATTCGTTTGGTCGGTTTGGAAAGTTCGGCGGTAAGTATGTACCGGAAACTCTAATGCACGCTCTTGATGAGCTGGAAACCGCCTTCAATTCGCTCGCTACAGACCAGGACTTTCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAACTAGATGGGATATTAAGAGATTATGTTGGCAGAGAGAGCCCTCTTTATTTTGCTGAGCGACTTACTGAGCATTATAAACGTCCAGATGGTGAAGGGCCAATGATCTACCTGAAGAGAGAAGATTTAAACCACACGGGTGCCCACAAAATCAATAATGCTGTTGCGCAAGCTTTGCTTGCCAAGCGCTTGGGAAAGAAACGCATTATTGCCGAGACAGGGGCTGGTCAGCATGGTGTTGCCACTGCAACTGTTTGTGCTCGGTTTGGTTTGGACTGTGTTATTTATATGGGTGCTCAAGATATGGAGAGGCAAGCATTGAATGTCTTCAGAATGCGACTGCTTGGAGCTGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAGAGCAGTCCACTCTGGAACTGCTACTCTCAAGGATGCTACTTCAGAAGCTATAAGGGATTGGGTTACAAATGTTGAAACAACTCACTACATACTTGGATCTGTTGCAGGACCACACCCTTACCCCATGATGGTTAGGGAGTTCCATGCAGTGATTGGTAAAGAAACAAGGAAGCAATCATTGGAAAAGTGGGGCGGGAAACCAGACGTGCTTGTTGCATGTGTTGGTGGAGGTTCAAATGCTATGGGACTCTTTCATGAGTTTGTTGATGACAAAGATGTGAGGTTGATTGGGGTTGAAGCAGCAGGTTTTGGTCTAGATAGTAGTAAACATGCCGCCACTTTGACAAAGGGTGAGGTAGGAGTACTGCATGGAGCTATGAGTTATCTACTGCAAGACGAAGATGGGCAGATTGTTGAGCCTCATTCTATCAGTGCCGG............................................................................................................................................................ATTGGATTACCCAGGAGTTGGGCCAGAACACAGCTTTTTGAAAGATCTCGGTAGAGCAGAATATTATAGCATCACAGATGAGGAGGCTTTGGAAG................................................................................................................................................CCTTCAAAAGGTTATCTCGGTTAGAGGGTATCATCCCCGCTCTGGAAACATCTCATGCTCTCGCCTACTTAGAGAAGCTGTGTCCAACTCTAGCAAATGGAACTAAGGTCGTGCTCAACTGCAGCGGTAGAGGCGATAAAGATGTTCAGACTGCTATTAAATATTTGAAGGTTTGATGGAAAAGTTCGTAACACTTGTCCCAAAGAGTTATCTGTACTTTAAAGGTAACTTTTCTGTTTTATAGCAGAAACGAATTTTGTAAGTTAAATAAAGATGTCTTGTTAGAGCTGTAGATTCATGAACCCAGAACCCAGTTCTATTGATCGTTAATCGGTCCACAAAATTTCACTTTAATCGGTCCTCTGATCGATCAATGTCAAACATGTATCGCTAATTTAGGCATGCTGTTTATTTGAGCCAAATTCTGGGAGGTTTATTAACCAAATGTGTGTTTAAATGNNCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U592366" ref_strand="+" ref_description="SGN-U592366 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>aataaacctcccagaatttggctcaaataaacagcatgcctaaattagcgatacatgtttgacattgatcgatcagaggaccgattaaagtgaaattttgtggaccgattaacgatcaatagaactgggttctgggttcatgaatctacagctctaacaagacatctttatttaacttacaaaattcgtttctgctataaaacagaaaagttacctttaaagtacagataactctttgggacaagtggtaccaacttttccctccaaccttccaatatttaataacaggctgaacatctttatcgcctctaccgctgcagttgaacaccaacctaattccctttgctaaaagtggacacagcttctcttaataagcgagaacatgagaagttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="+" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="22233" stop="23225"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22533" g_stop="22925" g_length="393"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="393" r_length="393" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="+" ref_id="SGN-U592366" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>393</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U592366" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22533" e_stop="22925"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATAAACCTCCCAGAATTTGGCTCAAATAAACAGCATGCCTAAATTAGCGATACATGTTTGACATTGATCGATCAGAGGACCGATTAAAGTGAAATTTTGTGGACCGATTAACGATCAATAGAACTGGGTTCTGGGTTCATGAATCTACAGCTCTAACAAGACATCTTTATTTAACTTACAAAATTCGTTTCTGCTATAAAACAGAAAAGTTACCTTTAAAGTACAGATAACTCTTTGGGACAAGTGTTACGAACTTTTCCATCAAACCTTCAAATATTTAATAGCAGTCTGAACATCTTTATCGCCTCTACCGCTGCAGTTGAGCACGACCTTAGTTCCATTTGCTAGAGTTGGACACAGCTTCTCTAAGTAGGCGAGAGCATGAGATGTTT</genome_strand>
        <mrna_strand>AATAAACCTCCCAGAATTTGGCTCAAATAAACAGCATGCCTAAATTAGCGATACATGTTTGACATTGATCGATCAGAGGACCGATTAAAGTGAAATTTTGTGGACCGATTAACGATCAATAGAACTGGGTTCTGGGTTCATGAATCTACAGCTCTAACAAGACATCTTTATTTAACTTACAAAATTCGTTTCTGCTATAAAACAGAAAAGTTACCTTTAAAGTACAGATAACTCTTTGGGACAAGTGGTACCAACTTTTCCCTCCAACCTTCCAATATTTAATAACAGGCTGAACATCTTTATCGCCTCTACCGCTGCAGTTGAACACCAACCTAATTCCCTTTGCTAAAAGTGGACACAGCTTCTCTTAATAAGCGAGAACATGAGAAGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U590885" ref_strand="+" ref_description="SGN-U590885 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|15239755|ref|NP_200292.1| (e_value=3e-27) tryptophan synthase, beta subunit 1 (TSB1) [Arabidopsis thaliana]; (*ATH) AT5G54810.1 (e_value=1e-29) | Symbol: None | tryptophan synthase, beta subunit 1 (TSB1), identical to SP:P14671 | chr5:22281834-22284011 REVERSE | Aliases: MBG8.7, MBG8_7; (*SWP) sp|P14671|TRPB1_ARATH (e_value=1e-28) Tryptophan synthase beta chain 1, chloroplastic OS=Arabidopsis thaliana GN=TSB1; ">
      <seq>ctgaagagagaagatttaaaccacacgggtgcccgcaatatcaataatgctgtcgcgcaagctttgcttgccaagcgctcgggaaagaaacgcattattgccgaaacaggggctggtcaacatggtgttgtcactgtaactggttgagctcggattggttgggactgtgacatttatatgggtgctcaagatatggataggcaatcattgaatgtcttcagaatgcga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="-" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="25111" stop="24284"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24811" g_stop="24584" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="228" r_length="228" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="-" ref_id="SGN-U590885" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>228</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U590885" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24811" e_stop="24584"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGAAGAGAGAAGATTTAAACCACACGGGTGCCCACAAAATCAATAATGCTGTTGCGCAAGCTTTGCTTGCCAAGCGCTTGGGAAAGAAACGCATTATTGCCGAGACAGGGGCTGGTCAGCATGGTGTTGCCACTGCAACTGTTTGTGCTCGGTTTGGTTTGGACTGTGTTATTTATATGGGTGCTCAAGATATGGAGAGGCAAGCATTGAATGTCTTCAGAATGCGA</genome_strand>
        <mrna_strand>CTGAAGAGAGAAGATTTAAACCACACGGGTGCCCGCAATATCAATAATGCTGTCGCGCAAGCTTTGCTTGCCAAGCGCTCGGGAAAGAAACGCATTATTGCCGAAACAGGGGCTGGTCAACATGGTGTTGTCACTGTAACTGGTTGAGCTCGGATTGGTTGGGACTGTGACATTTATATGGGTGCTCAAGATATGGATAGGCAATCATTGAATGTCTTCAGAATGCGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U600243" ref_strand="+" ref_description="SGN-U600243 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157338385|emb|CAO39429.1| (e_value=1e-52) unnamed; (*ATH) AT5G54840.1 (e_value=4e-47) | Symbol: None | GTP-binding family protein, similar to SP:P87027 Septum-promoting GTP-binding protein 1 (GTPase spg1)(Sid3 protein) {Schizosaccharomyces pombe} | chr5:22293739-22295643 REVERSE | Aliases: MBG8.10, MBG8_10; (*SWP) sp|P87027|SPG1_SCHPO (e_value=5e-31) Septum-promoting GTP-binding protein 1 OS=Schizosaccharomyces pombe GN=spg1; ">
      <seq>gattcagatttagttactttaaagatcagtatttttggtgattgtcagattggtaaaacaagttttgtgattaagtatgtaggtgatgaacaagaaaagaggtgcttgcagacgaagggattgaacttaatggataaaacattagttgtacgaggtgcacgaattgcatttagaatatgggatgtaggaggtgatcatagctcatttgatcagattccaatagcttgtaaagattctgttgccattctctttatgttcgatctcactagccggagtacattgaacaatgtgataagttggtatactgaagcaagaaaatggaatcagactgctattccaatactaattgggaccaaatttgatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="-" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="30929" stop="27883"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30629" g_stop="30561" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="69" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30560" i_stop="29571" i_length="990">
            <donor d_prob="0.948" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29570" g_stop="29450" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="190" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29449" i_stop="29303" i_length="147">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29302" g_stop="29206" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="191" r_stop="287" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29205" i_stop="29100" i_length="106">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29099" g_stop="29060" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="327" r_length="40" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="29059" i_stop="28222" i_length="838">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.910" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28221" g_stop="28183" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="328" r_stop="366" r_length="39" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="-" ref_id="SGN-U600243" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>366</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U600243" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30629" e_stop="30561"/>
          <exon e_start="29570" e_stop="29450"/>
          <exon e_start="29302" e_stop="29206"/>
          <exon e_start="29099" e_stop="29060"/>
          <exon e_start="28221" e_stop="28183"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTCAGATTTAGTTACTTTAAAGATCAGTATTTTTGGTGATTGTCAGATTGGTAAAACAAGTTTTGTGGTAAGTTTAACATAATTTTCTCTGTTTAGCTTAATATGTTGCTTTGTTACGTTTACGGAATTAAGATTTTGAATTTACGAATTCTGAATTATAGAAAAAATCCCTTGTGGGCTAAGCTCCAGCTCCGCCCCGGTGTGTGGGCCAATTTACGAACATATAGAGTAGATGATGAGCCTAGGTTGGTCCGGCCTTCGAAAAATATTGACATACCTATATTGGATCCTCCAAAAAGCATGTTTTTTTTAAGGATCTCGATAATATTTTTGAAAAATTCAAACAACAAAATGGTTTACTAAGATTTGGAGGACTTTCTTTTTTCTAGTGAAATTTGTGTTCTAATGTGTTTAGTATGAAGGAAAATGCTTTCTATGAAACAATATATTCTTGGAAAACGAGTGTATCTTTTATTTATTTTCTAGTGTTTAGCAAGTAAGAAAAAAAATATTATCCCTAGAGCAACTATATGTTATTTAGCAAAATATACAGGGTGGAAATGTGGTGGGGAGTGGGGATGGCAGGAATTTTGATGATCAGGGGGTAGGGTTGGGAGGTGGCGGGGTTTGGATGATCTAGGGGTGAGGTTGGGAGGTGGCACCCGGGATTTGGATGATCTAGGGGTGGGGTTGGGAGGTGGCATCTGGGGTTTGGATGATCTAGGGTGGGGTTGGGAGGTGGCGCCTGGGATTTGGATGATCTAGGGGTGGGGTTGAGAGGTGGCGGGGTTTGGATGATCAAGGGGTGGGATGGGGTGGGGTGTGGGGGAACACACAAGAAATTATTTTCCTCATTTTTAAGTAATTTGTTTAACCGAACATGGGAAAATTGAAAGTACTTTTCACCAGACCAAACACGCCGATTGGCCATTTTCCACTATTGATCACGAGTTCACACCCTTGATTGTCGAGTTAGAATGTTAAACTTCTTACGCTTAAACAAAGAAACAGTTTTTTTTCAACACCGTTGGTAACTTTTTAAATTTTTGTTTTCCAGATTAAGTATGTAGGTGATGAACAAGAAAAGAGGTGCTTGCAGACGAAGGGATTGAACTTAATGGATAAAACATTAGTTGTACGAGGTGCACGAATTGCATTTAGAATATGGGATGTAGGAGGTAAGTTCATTAATTTTCTTCCTAAATCTGGAAAGCTAATTATGTTTACTTGTTTAGGCCAAATTCGTCACTTTTAAGGTAGTTACTATAGCTTGATTAATGCAACGACTAATTCGGTTCTTGAATTTTTGAACTTTTGGTTTATAGGTGATCATAGCTCATTTGATCAGATTCCAATAGCTTGTAAAGATTCTGTTGCCATTCTCTTTATGTTCGATCTCACTAGCCGGAGTACATTGAACAAGTATGTAACTTGTCAAGAAAAGAAGATCTATTCGTATTTCTTATGTGCATAAAAGTTGAACTCCGTTATTAAAAGCTTTCGTTTTTGTTTTTTTTTGTAATTGCAGTGTGATAAGTTGGTATACTGAAGCAAGAAAATGGAATCAGGTGAGAAACTTCAACTTCTCTTTCACCTTGATGTTGTTTTCTTGAAAAAAGGAGTAAACTTTAAAACCAAGAATCATCTTTACTTATTACTAACAAAGAAAAAAGTTGGATGTGACTTAGCAATTCATTTCACCAAATAAAAGAAAAAGTAGTACAAACAACAAAATAACTATAGTGGTTGAGACTTTATTGATATACTGAAATAAATTGATTAATGACAGTAGTTGGAACTGCTTTCACTCTTTTGAATAAAAAGTAGATATGGCAATAAGTAAAGTAGTACTTTAGTTACTTTTGTTCTTGAAGATGATAACTTTATCTGTTGGTTCATTTAGATTTTAATGATTGAAGCTTAATGATCAGAATACGTTGTTATTAGCAAAACTTGATTAGCTTCAACTTTCAAGAAGAATGAATTGAACAACGATGTTCAAAGGTGCGGTCTAGAGGTCAATGAAGAGGTTGAGAACCATGAGGTCTCGGGTTCAAACACTAGGTGATTTCCTCTCTGTGTCCGAACTTCGGCAAACAGAGTTACCTTGTAGTTGTACCGGAGGGAGGTAGTATGTACCTATGAATTTAGTTGAGGTGTCCCCAAGTTGGTCCGTACACCACGGCTATTAAAAGAAATCAATTGAATAACAAACATGATGATCATCACCACTAGTTCTGATGTTCTTTTTCAATGAAAACTGATTAAATATGTATTTTGGTAAAGATTATGAAGTTGAATACTGTTCTTGATAATGATGGATGGATTAACATTTATAATATATGATCTATAGAATTTAAAACATTGTTAGCGAAGCTAATGAAGTCTGATCCTTGACAATTGCAGACTGCTATTCCAATACTAATTGGGACCAAATTTGATGAT</genome_strand>
        <mrna_strand>GATTCAGATTTAGTTACTTTAAAGATCAGTATTTTTGGTGATTGTCAGATTGGTAAAACAAGTTTTGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAGTATGTAGGTGATGAACAAGAAAAGAGGTGCTTGCAGACGAAGGGATTGAACTTAATGGATAAAACATTAGTTGTACGAGGTGCACGAATTGCATTTAGAATATGGGATGTAGGAG...................................................................................................................................................GTGATCATAGCTCATTTGATCAGATTCCAATAGCTTGTAAAGATTCTGTTGCCATTCTCTTTATGTTCGATCTCACTAGCCGGAGTACATTGAACAA..........................................................................................................TGTGATAAGTTGGTATACTGAAGCAAGAAAATGGAATCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCTATTCCAATACTAATTGGGACCAAATTTGATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U568262" ref_strand="+" ref_description="SGN-U568262 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|9294677|dbj|BAB03026.1| (e_value=6e-13) unnamed; (*ATH) AT3G24080.1 (e_value=5e-15) |; ">
      <seq>cctaaaagagagacaatacaatcgaattggattcgccgcctcgccgccgtaaagagaaaaatggtactgaagctattcgaggatgacggtgatgagctggacaagattgagattaacgaggaattcgcccgccggtacgagcacaacaagaaaagagaagacttgcaaaagctggaagagttgaagaagaaaggcatagttgatgactccgacgcaggatccgatgaggaagacgatgaagaagaagaggatctggatacttcaagtaatttaaagttctttgatggtttgcttaagattaaaaaaggtgaccctgttttgaatactaaagatgctaagttatttaattctgaatctgaaactaatactgagtcggaggaggatgaagaaaaggagaagaaagtgaaaaagaaaaagcaaaagccaatgtatttgaaggatgtagcctctaagcatttgattgaggagggtcccgaattcggagacgaagaggaagagaacaaagtgaagacgtataacgaggagcaagatgatttgagaaacgagttcttaaatgctgttaaggatgaggaagaagaagagggggacttgtttaagatgaaagaggctgagaaagatgaggagganggtgaccctgantttactaagaagttggatgagtttttcggggaggatgataagctcgatgagcagannngtttttaanggatttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="+" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="51987" stop="53280"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52287" g_stop="53002" g_length="716"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="715" r_length="715" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="+" ref_id="SGN-U568262" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>716</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U568262" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52287" e_stop="53002"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTAAAAGAGAGACAATACAATCGAATTGGATTCGCCGCCTCGCCGCCGTAAAGAGAAAAATGGTACTGAAGCTATTCGAGGATGACGGTGATGAGCTGGACAAGATTGAGATTAACGAGGAATTCGCCCGCCGGTACGAGCACAACAAGAAAAGAGAAGACTTGCAAAAGCTGGAAGAGTTGAAGAAGAAAGGCATAGTTGATGACTCCGACGCAGGATCCGATGAGGAAGACGATGAAGAAGAAGAGGATCTGGATACTTCAAGTAATTTAAAGTTCTTTGATGGTTTGCTTAAGATTAAAAAAGGTGACCCTGTTTTGAATACTAAAGATGCTAAGTTATTTAATTCTGAATCTGAAACTAATTCTGAGTCGGAGGAGGATGAAGAAAAGGAGAAGAAAGTGAAAAAGAAAAAGCAAAAGCCAATGTATTTGAAGGATGTAGCCTCTAAGCATTTGATTGAGGAGGGTCCCGAATTCGGAGACGAAGAGGAAGAGAACAAAGTGAAGACGTATAACGAGGAGCAAGATGATTTGAGAAACGAGTTCTTAAATGCTGTTAAGGATGAGGAAGAAGAAGAGGGGGACTTGTTTAAGATGAAAGAGGCTGAGAAAGATGAGGAGGAGGGTGACCCTGAGTTTACTAAGAAGTTGGATGAGTTTTTCGGGGAGGATGATAAGCTCGATGAGCAGACGGTGTTTTTAAAGGATTTTTT</genome_strand>
        <mrna_strand>CCTAAAAGAGAGACAATACAATCGAATTGGATTCGCCGCCTCGCCGCCGTAAAGAGAAAAATGGTACTGAAGCTATTCGAGGATGACGGTGATGAGCTGGACAAGATTGAGATTAACGAGGAATTCGCCCGCCGGTACGAGCACAACAAGAAAAGAGAAGACTTGCAAAAGCTGGAAGAGTTGAAGAAGAAAGGCATAGTTGATGACTCCGACGCAGGATCCGATGAGGAAGACGATGAAGAAGAAGAGGATCTGGATACTTCAAGTAATTTAAAGTTCTTTGATGGTTTGCTTAAGATTAAAAAAGGTGACCCTGTTTTGAATACTAAAGATGCTAAGTTATTTAATTCTGAATCTGAAACTAATACTGAGTCGGAGGAGGATGAAGAAAAGGAGAAGAAAGTGAAAAAGAAAAAGCAAAAGCCAATGTATTTGAAGGATGTAGCCTCTAAGCATTTGATTGAGGAGGGTCCCGAATTCGGAGACGAAGAGGAAGAGAACAAAGTGAAGACGTATAACGAGGAGCAAGATGATTTGAGAAACGAGTTCTTAAATGCTGTTAAGGATGAGGAAGAAGAAGAGGGGGACTTGTTTAAGATGAAAGAGGCTGAGAAAGATGAGGAGGANGGTGACCCTGANTTTACTAAGAAGTTGGATGAGTTTTTCGGGGAGGATGATAAGCTCGATGAGCAGA-NNNGTTTTTAANGGATTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U597533" ref_strand="+" ref_description="SGN-U597533 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|9294677|dbj|BAB03026.1| (e_value=2e-27) unnamed; (*ATH) AT3G24080.1 (e_value=2e-29) |; (*SWP) sp|Q6DRJ4|KRI1_DANRE (e_value=1e-13) Protein KRI1 homolog OS=Danio rerio GN=kri1; ">
      <seq>tgtggacgagcctcgtgatgggtttttgtcaactagggaaaaacttctgaaagctatagaaactgaaggtgatcacgagcaaacaactgatgacaataaagtaagtgcagatgacgatgaggctgctgaagatggtaaaagaaagaagaaacggaagcgaactaatacagttatgaaggcagttagagaagaactaatggaggagtattataaattggactatgaggatactattggggatttgaagacaagatttaagtataggcctgtcaaagctaaaagattcgggcttgctccagcggaggtgctaatgatggaggatactgagttaaatcagtatgtccctttgaagaagatagcgccatatagagaaaaggaatggaaggtatcccgtttgaaattgttgcaactgaaagatgtatcaaaatctgacaagaagccaaagtttgataataaggaaaaagttgaagctgagaccgatgataggaaaaggaaacaagaagaatctgacggagacacaataaaacaatccaggcgaagta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="+" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="53267" stop="54408"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53567" g_stop="54108" g_length="542"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="542" r_length="542" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="+" ref_id="SGN-U597533" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>542</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U597533" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53567" e_stop="54108"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGGACGAGCCTCGTGATGGGTTTTTGTCAACTAGGGAAAAACTTCTGAAAGCTATAGAAACTGAAGGTGATCACGAGCAAACAACTGATGACAATAAAGTAAGTGCAGATGACGATGAGGCTGCTGAAGATGGTAAAAGAAAGAAGAAACGGAAGCGAACTAATACAGTTATGAAGGCAGTTAGAGAAGAACTAATGGAGGAGTATTATAAATTGGACTATGAGGATACTATTGGGGATTTGAAGACAAGATTTAAGTATAGGCCTGTCAAAGCTAAAAGATTCGGGCTTGCTCCAGCGGAGGTGCTAATGATGGAGGATACTGAGTTAAATCAGTATGTCCCTTTGAAGAAGATAGCGCCATATAGAGAAAAGGAATGGAAGGTATCCCGTTTGAAATTGTTGCAACTGAAAGATGTATCAAAATCTGACAAGAAGCCAAAGTTTGATAATAAGGAAAAAGTTGAAGCTGAGACCGATGATAGGAAAAGGAAACAAGAAGAATCTGACGGAGACACAATAAAACAATCCAGGCGAAGTA</genome_strand>
        <mrna_strand>TGTGGACGAGCCTCGTGATGGGTTTTTGTCAACTAGGGAAAAACTTCTGAAAGCTATAGAAACTGAAGGTGATCACGAGCAAACAACTGATGACAATAAAGTAAGTGCAGATGACGATGAGGCTGCTGAAGATGGTAAAAGAAAGAAGAAACGGAAGCGAACTAATACAGTTATGAAGGCAGTTAGAGAAGAACTAATGGAGGAGTATTATAAATTGGACTATGAGGATACTATTGGGGATTTGAAGACAAGATTTAAGTATAGGCCTGTCAAAGCTAAAAGATTCGGGCTTGCTCCAGCGGAGGTGCTAATGATGGAGGATACTGAGTTAAATCAGTATGTCCCTTTGAAGAAGATAGCGCCATATAGAGAAAAGGAATGGAAGGTATCCCGTTTGAAATTGTTGCAACTGAAAGATGTATCAAAATCTGACAAGAAGCCAAAGTTTGATAATAAGGAAAAAGTTGAAGCTGAGACCGATGATAGGAAAAGGAAACAAGAAGAATCTGACGGAGACACAATAAAACAATCCAGGCGAAGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U598164" ref_strand="+" ref_description="SGN-U598164 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ctcagaaacaggacttaaaagagataaatagtctttttctcttcttttttttttctccggggaccgtcgccgcacggttcaccgtcgacgggaaaattagggctaatttttgggaattttcaaaaaaggttctaattttccaattgagaattttgatgatagtgttcatgagtatctgtgggcattatttgaattcgtttcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="+" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="56287" stop="57088"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56587" g_stop="56788" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="202" r_length="202" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="+" ref_id="SGN-U598164" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>202</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U598164" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56587" e_stop="56788"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCAGAAACAGGACTTAAAAGAGATAAATAGTCTTTTTCTCTTCTTTTTTTTTTCTCCGGTGACCGTCGCCGCACGGTTCACCGTCGACGGGAAAATTAGGGCTAATTTTTGGGAATTTTCAAAAAATGTTCTAATTTTCCAATTGAGAATTTTGATGATAGTGTTCATGAGTATCTGTTGGCATTATTTGAATTCGTTTCG</genome_strand>
        <mrna_strand>CTCAGAAACAGGACTTAAAAGAGATAAATAGTCTTTTTCTCTTCTTTTTTTTTTCTCCGGGGACCGTCGCCGCACGGTTCACCGTCGACGGGAAAATTAGGGCTAATTTTTGGGAATTTTCAAAAAAGGTTCTAATTTTCCAATTGAGAATTTTGATGATAGTGTTCATGAGTATCTGTGGGCATTATTTGAATTCGTTTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U589210" ref_strand="+" ref_description="SGN-U589210 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|147822535|emb|CAN68395.1| (e_value=2e-81) hypothetical; (*ATH) AT3G20530.1 (e_value=3e-78) | Symbol: None | protein kinase family protein, contains protein kinase domain, Pfam:PF00069 | chr3:7166066-7167930 FORWARD | Aliases: K10D20.14; (*SWP) sp|Q9FE20|PBS1_ARATH (e_value=7e-74) Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1; ">
      <seq>aatatggctgttgctgtgaaacaacttggacagggaatggtttccaagggaacgaaagagttccttgtggaggtcctgctgttgagtcttctccgtcactctaaccttgtcaatttgataggatactgttcagacggtgatcagagaatattagtttacgagctcatgtcaaatgattctttagaagttcatcttcttgaacttggtccagatcaaaagcctcttgattggtatacaaggatgaaaattgcaaccggagcagcaagaggacttgcatacttgcatgaaacggctaatcctcccgtgatttatcgggactttaaatcatccaacatacttttagatgagaactttgatcccaagctttctgatttcggacttgccaagctaggaccaacaggtgacagttctcatgtgtccaccagggtcatgggaacttatggttattgtgcacctgactatgcttgcacaggtaaattgaccattaagtccgatgtttatagcttcggtgtagtccttttagaaataatctcaggaagaagagtcatcgacagctccagacccagcgaagaaaagaacctcatcaagtgggcacgaccactgatcagcgataagaagttgcacttaatagcagatccattgctacgagggaactacccgaggang</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="+" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="58159" stop="59873"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58350" g_stop="58355" g_length="6"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="6" r_length="6" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58356" i_stop="58461" i_length="106">
            <donor d_prob="0.930" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="0.87"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58462" g_stop="58651" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="7" r_stop="199" r_length="193" r_score="0.968"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58652" i_stop="58964" i_length="313">
            <donor d_prob="0.939" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="58965" g_stop="59356" g_length="392"/>
          <reference_exon_boundary r_type="cDNA" r_start="200" r_stop="591" r_length="392" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="59357" i_stop="59498" i_length="142">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="59499" g_stop="59573" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="592" r_stop="666" r_length="75" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="+" ref_id="SGN-U589210" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>663</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U589210" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58350" e_stop="58355"/>
          <exon e_start="58462" e_stop="58651"/>
          <exon e_start="58965" e_stop="59356"/>
          <exon e_start="59499" e_stop="59573"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATATGGTACTCTCCCTTCATTTTGTTTGTTTGAAAATTGATAAGCTTTCGTCAACTCTAAAAGAAAACAAAGGGGAAATGATTTAACTATTGTTTTTCTCATGTTGCTTAGGCTGTTGCTGTGAAACAACTT-GACA-GGAATGGTTTCCAA-GGAACGAAAGAGTTCCTTGTGGAGGTCCTGCTGTTGAGTCTTCTCCGTCACTCTAACCTTGTCAATTTGATAGGATACTGTTCAGACGGTGATCAGAGAATATTAGTTTACGAGCTCATGTCAAATGATTCTTTAGAAGTTCATCTTCTTGGTATGCATTCATATCCGACCATCTCCAAATTTCGTTAATTGAAGAACTCAAGTTCGAAACCCCTTGCCGGCGAAAGCAAGGGGTTTGTCTTCTGGGTCAAGCTTGTCGCACCGGGCTTGCCTAGTGCGGGTTTCCTCTCCTATGTGGTTTGCGAGCTATTGTATAGGAGCAGGGGTTTTACCCTGTGTGTACCCAAAGGGTAGCGGTTGCGGGTTCCCAAAATAAAAATAAAAATATGCATATCCAATTATCCATTCAATAACTTGATCAATGAGTGTCATTCACAATAATATAATTTCCCATTGTTTGGCAGAACTTGGTCCAGATCAAAAGCCTCTTGATTGGTATACAAGGATGAAAATTGCAACCGGAGCAGCAAGAGGACTTGCATACTTGCATGAAACGGCTAATCCTCCCGTGATTTATCGGGACTTTAAATCATCCAACATACTTTTAGATGAGAACTTTGATCCCAAGCTTTCTGATTTCGGACTTGCCAAGCTAGGACCAACAGGTGACAGTTCTCATGTGTCCACCAGGGTCATGGGAACTTATGGTTATTGTGCACCTGACTATGCTTGCACAGGTAAATTGACCATTAAGTCCGATGTTTATAGCTTCGGTGTAGTCCTTTTAGAAATAATCTCAGGAAGAAGAGTCATCGACAGCTCCAGACCCAGCGAAGAAAAGAACCTCATCAAGTGGGTAAGTTTCAAGAATTCAATGTCGTTTCATTTTATATGACACGTTTTCCTTCCTAATATGTTAGTGCCAAAAGTGTTTCTCTTTGTTACACTCCGTGCCTAGCAATTATGAACCTATCTTTATTTGACAAATTGATGGACAGGCACGACCACTGATCAGCGATAAGAAGTTGCACTTAATAGCAGATCCATTGCTACGAGGGAACTACCCGAGGAGG</genome_strand>
        <mrna_strand>AATATG..........................................................................................................GCTGTTGCTGTGAAACAACTTGGACAGGGAATGGTTTCCAAGGGAACGAAAGAGTTCCTTGTGGAGGTCCTGCTGTTGAGTCTTCTCCGTCACTCTAACCTTGTCAATTTGATAGGATACTGTTCAGACGGTGATCAGAGAATATTAGTTTACGAGCTCATGTCAAATGATTCTTTAGAAGTTCATCTTCTTG.........................................................................................................................................................................................................................................................................................................................AACTTGGTCCAGATCAAAAGCCTCTTGATTGGTATACAAGGATGAAAATTGCAACCGGAGCAGCAAGAGGACTTGCATACTTGCATGAAACGGCTAATCCTCCCGTGATTTATCGGGACTTTAAATCATCCAACATACTTTTAGATGAGAACTTTGATCCCAAGCTTTCTGATTTCGGACTTGCCAAGCTAGGACCAACAGGTGACAGTTCTCATGTGTCCACCAGGGTCATGGGAACTTATGGTTATTGTGCACCTGACTATGCTTGCACAGGTAAATTGACCATTAAGTCCGATGTTTATAGCTTCGGTGTAGTCCTTTTAGAAATAATCTCAGGAAGAAGAGTCATCGACAGCTCCAGACCCAGCGAAGAAAAGAACCTCATCAAGTGG..............................................................................................................................................GCACGACCACTGATCAGCGATAAGAAGTTGCACTTAATAGCAGATCCATTGCTACGAGGGAACTACCCGAGGANG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U598177" ref_strand="+" ref_description="SGN-U598177 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|76880150|dbj|BAE45850.1| (e_value=2e-106) DNA; (*ATH) AT1G50840.1 (e_value=9e-89) | Symbol: POLGAMMA2 | DNA Polymerase gamma2. Dual targeting to mitochondria and plastids due to alternative translation initiation. | chr1:18842791-18848227 FORWARD | Aliases: F8A12.8, F8A12_8, POLGAMMA2; (*SWP) sp|P52026|DPO1_BACST (e_value=1e-28) DNA polymerase I OS=Bacillus stearothermophilus GN=polA; ">
      <seq>gggcagttggaacttaggattcttgcacatcttgccaactgtaagagcatgttgggtgcattcgaagctggtggagacttccattcaaggactgccatgaatatgtatcctcacatccgtgaagctgttgaaaaggggcaggtacttcttgagtggcatcctcaacctggtgaagacaaaccaccagttcctctgctaaaggatgcttttggctctgaaagaaggaaagcaaagatgctcaatttttcaattgcgtacggaaaaactacaattggactctctcgcgattggaaggtatctgtaaaggaagcaaaggaaacagttgaacgttggtatagtgatagaaaagaagtgtcagattggcaagaacaacgcagatttgaagcacgtgagttcggatgtgttcacacacttctaggacgagcacgttggtttccgtcagtaaaaaatgcaaccggatccgttaaaggtcacatagaacgagctgctatcaatactccagtgcagggaagtgctgcagatgtcgctatgtgcgcgatgttagagatatcaaagaatgcacgactaaaggagcttggatggaaattgcttttacaggttcatgatgaangtattttggaaggaccagaagaatctgaggaagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="+" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="67964" stop="70089"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68181" g_stop="68186" g_length="6"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="6" r_length="6" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68187" i_stop="68265" i_length="79">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.416" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68266" g_stop="68460" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="7" r_stop="201" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="68461" i_stop="68649" i_length="189">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="68650" g_stop="68742" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="202" r_stop="294" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="68743" i_stop="68870" i_length="128">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="68871" g_stop="69083" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="507" r_length="213" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="69084" i_stop="69235" i_length="152">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.495" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="69236" g_stop="69325" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="508" r_stop="597" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="69326" i_stop="69741" i_length="416">
            <donor d_prob="0.702" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="69742" g_stop="69789" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="598" r_stop="645" r_length="48" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="+" ref_id="SGN-U598177" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>645</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U598177" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68181" e_stop="68186"/>
          <exon e_start="68266" e_stop="68460"/>
          <exon e_start="68650" e_stop="68742"/>
          <exon e_start="68871" e_stop="69083"/>
          <exon e_start="69236" e_stop="69325"/>
          <exon e_start="69742" e_stop="69789"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGCAGGTATCTAGCTGCTTACTGGTTATAATAGTTAGTATTTCTTGAATTGCTTGCAAAAAACTAACAATTTTCTCGAAATTAGTTGGAACTTAGGATTCTTGCACATCTTGCCAACTGTAAGAGCATGTTGGGTGCATTCGAAGCTGGTGGAGACTTCCATTCAAGGACTGCCATGAATATGTATCCTCACATCCGTGAAGCTGTTGAAAAGGGGCAGGTACTTCTTGAGTGGCATCCTCAACCTGGTGAAGACAAACCACCAGTTCCTCTGCTAAAGGTAACTGCAAACACTTATTGTGGATGGTGAAACTTTCATATTAATATGCAAGACAGGATAATTGTCGGATACAGTATTATACACCTGGTCAGCTACTTCCATGAGGGAAAATTCCACAAACAAGAATTTTAGTGCAAGAAGTTTGATTGAGTGGGATTTTAATGCAGTATAATGCAAATTTCTTTTCAGGATGCTTTTGGCTCTGAAAGAAGGAAAGCAAAGATGCTCAATTTTTCAATTGCGTACGGAAAAACTACAATTGGACTCTCTCGCGATTGGAAGGTACTTCAGCATCTTTGAGACAATTTTTTATATTTTGTGAATCTGACAATATCTATTTAATTACCTTGATTTTTATAAATATAGTTTTTTAGGTCTGTATGAGCTGAATGAATACTATTCATACTCAGGTATCTGTAAAGGAAGCAAAGGAAACAGTTGAACGTTGGTATAGTGATAGAAAAGAAGTGTCAGATTGGCAAGAACAACGCAGATTTGAAGCACGTGAGTTCGGATGTGTTCACACACTTCTAGGACGAGCACGTTGGTTTCCGTCAGTAAAAAATGCAACCGGATCCGTTAAAGGTCACATAGAACGAGCTGCTATCAATACTCCAGTGCAGGTCCATCTTAATCCACCTTCACCCGTTTCCTTTTTTGTGTGTGTGTGTGTGTGTTGCCATTGTCTCTCCTCTTTCCCTTTTTTCTTTTTGACAAGTTGTTTGCGCCGGTTTGTCCCCATGTACGCCAAGCTGACTTCTGAAGTTTTTGACAGGGAAGTGCTGCAGATGTCGCTATGTGCGCGATGTTAGAGATATCAAAGAATGCACGACTAAAGGAGCTTGGATGGAAATTGCTTTTACAGGTTTACCTTACGTTGCCCTTTACTGGATTCAGCTCATTTAGGAAAAGAAAAAACAAATAATAACAGAAAAACTGTACTCTTCTATCATATATGTGTTGGTACATCTCTGGATATCTCTCTCTGTAGGCTTCACCTACGATTTTCGAGCTCAACCCTTAAGTTTAACCTCATGTTGAGTTTGGAGAGACACCTCAATTACTGTTAATTCCGGTGATAGGTGTTGGACTTTTACCATTTTGCTGTGCTTAACTGCAGACAAAAAGATTAAAGATTGTTTTTCATGCAATATAAAAGGACATGACACATTTAGAATTTTATGTTTGCATAGCTTAGAATTATTTGTTGTATGCGCCTTGCAGTACCAGTTGATTGTGTGCGTCATTTGACACTGTACTTGATTGTTCGTCTTGGAACAGGTTCATGATGAAGTTATTTTGGAAGGACCAGAAGAATCTGAGGAAGAA</genome_strand>
        <mrna_strand>GGGCAG...............................................................................TTGGAACTTAGGATTCTTGCACATCTTGCCAACTGTAAGAGCATGTTGGGTGCATTCGAAGCTGGTGGAGACTTCCATTCAAGGACTGCCATGAATATGTATCCTCACATCCGTGAAGCTGTTGAAAAGGGGCAGGTACTTCTTGAGTGGCATCCTCAACCTGGTGAAGACAAACCACCAGTTCCTCTGCTAAAG.............................................................................................................................................................................................GATGCTTTTGGCTCTGAAAGAAGGAAAGCAAAGATGCTCAATTTTTCAATTGCGTACGGAAAAACTACAATTGGACTCTCTCGCGATTGGAAG................................................................................................................................GTATCTGTAAAGGAAGCAAAGGAAACAGTTGAACGTTGGTATAGTGATAGAAAAGAAGTGTCAGATTGGCAAGAACAACGCAGATTTGAAGCACGTGAGTTCGGATGTGTTCACACACTTCTAGGACGAGCACGTTGGTTTCCGTCAGTAAAAAATGCAACCGGATCCGTTAAAGGTCACATAGAACGAGCTGCTATCAATACTCCAGTGCAG........................................................................................................................................................GGAAGTGCTGCAGATGTCGCTATGTGCGCGATGTTAGAGATATCAAAGAATGCACGACTAAAGGAGCTTGGATGGAAATTGCTTTTACAG................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCATGATGAANGTATTTTGGAAGGACCAGAAGAATCTGAGGAAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U571702" ref_strand="+" ref_description="SGN-U571702 Tomato 200607#2 [8 ESTs aligned] (*GB) gi|42566875|ref|NP_193391.3| (e_value=7e-91) expressed protein [Arabidopsis thaliana]; (*ATH) AT4G16580.1 (e_value=5e-93) | Symbol: None | expressed protein | chr4:9341015-9342868 REVERSE | Aliases: DL4315C, FCAALL.400; (*SWP) sp|Q5U3N5|PPTC7_DANRE (e_value=2e-29) Protein phosphatase PTC7 homolog OS=Danio rerio GN=pptc7; ">
      <seq>ccgattgaataagctatatatatcttttttttaaaatcaaaaagaagagaaaatctacagtgaacccttatataaaagcttccaatttgcaccctagagtgaaaaagattgcagcttttgcatccaaatagtgaaaattgaggtatatttgaagtggggtttgagtagaaaaggataaagagagatttatcaggcagcaaaggctttgccgccggtgaaagaatttcgtaaaacgaatagctaagcagttatcagaactctccacttgaagtttgctgcttcccgagctactttttttattgatactcagaaagacatcatggctgtttgtggttcaaggactcatattgggcatttcgttggcaatatgactgctaggcgcctgcagtgtagtttgtcagtaaagggttgtactgtttcttacaacaaaagaggcttacaaaatgttagtaaagctaacatcaatttgggaaacaaaggacggcccaacaacttcatgctttaccaatatttgacgactaatgttgcaaagaggaggactaacctcaatccacacaaaggctttggattggaatgttttcgcaatttatcccacgaatgtttctattctggaactgcctctgcttctaatgtgtcttctgataattctaagggcacggaacaagttgttgacgttgttaattcttctgaagcacagatccccttgcagctaaactcgggatctttttacctacctcatcctgctaaagcaaaaactggtggagaggatgctcattttatttgtacccttacgccagcaatcggtgtagctgatggtgttggtggatgggctgatcttggtattgatgctggactatatgcccgtgaattgatgtctcactctttatctgcaattcaagatgaaccaaaaggttctgtagacctaatcagagtgctggagaaagcttacgtgagaacaaaagcaaaaggctcttgtacagcgtgtatcgttgcactcactgaagggggtctttatgcagttaatttaggagatagcggatttatgttggttagaaatggatgtgctgcatttaaatccccttcacagcagcatgggtttaatttcccatatcaactagattgcaacaacgcaggtgattcacctagctctgccatggtattcaaaattactgctttacctggagatgtcctaattgttggtacagatgggctttttgataatttgtatgacgaagatatcagtggagttgtatttcaggccatggaagatggcttagcgcctcagatgactgctcagcggatagcagaactggcacaactaagagcaatggatcatatcaagtcttcgcctttctctgatggagctcgcgaggctggatttgattaccatggtgggaagctggacgacatcaccgtagttgtttcttacataacagagtaaaattgaaaatccacaccatgtcacaatattcagtgatactattggaacagaatcaaaagctgaaggagagtcatacaatacagcaactttgatttgtttctaaaacaaagacacacaaatcaaagacaagaatgagaaggcttcagcagcatcttgggtctagctcagttcacctcagtttgatacaagtgttttactttatgaaattcaaatagcatgttgggatcattaacatttatttgatggaggattttcttctgtatttttgtttacttagtagataccatcagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="+" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="73877" stop="77699"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74171" g_stop="74424" g_length="254"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="255" r_length="255" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74425" i_stop="75922" i_length="1498">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.911" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75923" g_stop="77399" g_length="1477"/>
          <reference_exon_boundary r_type="cDNA" r_start="256" r_stop="1732" r_length="1477" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="+" ref_id="SGN-U571702" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>1731</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U571702" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74171" e_stop="74424"/>
          <exon e_start="75923" e_stop="77399"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGAGAATAAGTTATATATAT-TTTTTTTTAAAATCAAAAAGAAGAGAAAATCTACAGTGAACCCTTATATAAAAGCTTCCAATTTGCACCCTAGAGTGAAAAAGATTGCAGCTTTTGCATCCAAATAGTGAAAATTGAGGTATATTTGAAGTGGGGTTTGAGTAGAAAAGGATAAAGAGAGATTTATCAGGCAGCAAAGGCTTTGCCGCCGGTGAAAGAATTTCGTAAAACGAATAGCTAAGCAGTTATCAGGTGAAGTTTAATGATTCCCTTTTTCTCTGTTTGTTTATTTGTTATGAATTTGCTTTGTGTATATTGTTATTGAATGAGGAAGACATTGTTGATAAAGATAGTGGAAAATCCCAATTCCCTCATTGTAACTCTTATATTGTTGTTGTAATTACTTACATGGTCTTTTCTTGAATTCCTTCCAGCATTTTGTTTTGTCTAGTCTGGTCTTATCTGTTAATTATATACTGTGCTGATTTGAGAAGAATAAGGGGGACTTTTAATTGGAGGGTGTGCTCTAGTGGTCGAGGAATGGGTCGGGAATCATGAGGTCTGATGTTCAAATCATAGCGGAGTTAAAAATACACATCTGTGGAAGTGAAGTGTTAAGCAGACCAACTGGTGCGTGGACCAAGAGCCTAAACAAAGATGGATATGACATTAGGACTAACTCAACCTCTAAAGCTAGCTAATGAAAGGAGGATCACCCAAATCCATATAAACAGACCCCTGGTTCATTACCCATTTGTTTCCCAACCAGTGTGAGACTCTAACCACTCTTAACTGTTTGAAATTGTAATTTTGAAAAGAACAAGTACAACAAGTATGAAAAGTTCTTTAAACTCCAAAGCGGAATCAATCAATTTATGGACAGAGTCAGATGATACTTTTACTGGTGGGAGGTGAGAGGTAGTCCTGGAGATAGTTGAGTTATGTGCAAGCTGACCTAGGTACCACGTTTATCAAAAAAGAAATAAGGGCGATATTCTCAAACCCCACTTTTGTTATGTGGTCAATTAATCTGGGCTTCAGGCATAGTTGATAGTATTAAGTTATTGGCGTGTGTGGGTGGGTCAACTTCACTACAGGCATGCGTAGTTGAGTTACTACATCATTTTGGCTTACCCCAGATAACAAAAGCTCAATTCTTTTGATTGTTTAACTTGTGATAGATATAGGTTGTACATTTTTCTTTTGATTTTTGTTTAAAAATTCCACATAGAGATTGAGAAGAAAAAACAATTGAAATTCTAAGTTCTCCTTCAGGCCCATTAAGGATTGATTACTGTCTCTGCCTCACTGTGTCACACTCTTTCGTTGGCTGATGACAGTTTTCTTGTTACCCTTGAGCTTATTGTTGGAATAGTTCCACTTTGGAAAGTTCAATTGCAACTTTTGGCTGCTAATAAGCTCCCGGGTATTTTGTATTCATGAATGTGTTTTTAGTTCTTAATTTGACTGAGTCAATTTTCTTGATATTCGTGTTTCGTATGACGTTTTCGTTTCAACTTCATAGGTTTTATTTGCCTGGCTTTACAACTTGCACTTTCTAGCCTGCATATGATAACGCAATCTCCTCAGTATAAATATTTGTTTATAAGATCAATTGAAGGGGAGATATAGGAGCTTGTGTTATGTGTGTCTTGCTTTGTCAGTTTGTTTTATCTACTATGTCCATTAAAAAGAAGAAAACGCAAGCTACTTATGTAACCTCATGTTGTTTCCTTCCATGGTTTTGCAGAACTCTCCACTTGAAGTTTGCTGCTTCCCGAGCTACTTTTTTTATTGATACTCAGAAAGACATCATGGCTGTTTGTGGTTCAAGGACTCATATTGGGCATTTCGTTGGCAATATGACTGCTAGGCGCCTGCAGTGTAGTTTGTCAGTAAAGGGTTGTACTGTTTCTTACAACAAAAGAGGCTTACAAAATGTTAGTAAAGCTAACATCAATTTGGGAAACAAAGGACGGCCCAACAACTTCATGCTTTACCAATATTTGACGACTAATGTTGCAAAGAGGAGGACTAACCTCAATCCACACAAAGGCTTTGGATTGGAAGGTTTTCGCAATTTATCCCACGAATGTTTCTATTCTGGAACTGCCTCTGCTTCTAATGTGTCTTCTGATAATTCTAAGGGCACGGAACAAGTTGTTGACGTTGTTAATTCTTCTGAAGCACAGATCCCCTTGCAGCTAAACTCGGGATCTTTTTACCTACCTCATCCTGCTAAAGCAAAAACTGGTGGAGAGGATGCTCATTTTATTTGTACCCTTACGCCAGCAATCGGTGTAGCTGATGGTGTTGGTGGATGGGCTGATCTTGGTATTGATGCTGGACTATATGCCCGTGAATTGATGTCTCACTCTTTATCTGCAATTCAAGATGAACCAAAAGGTTCTGTAGACCTAATCAGAGTGCTGGAGAAAGCTTACGTGAGAACAAAAGCAAAAGGCTCTTGTACAGCGTGTATCGTTGCACTCACTGAAGGGGGTCTTTATGCAGTTAATTTAGGAGATAGCGGATTTATGTTGGTTAGAAATGGATGTGCTGCATTTAAATCCCCTTCACAGCAGCATGGGTTTAATTTCCCATATCAACTAGATTGCAACAACGCAGGTGATTCACCTAGCTCTGCCATGGTATTCAAAATTACTGCTTTACCTGGAGATGTCCTAATTGTTGGTACAGATGGGCTTTTTGATAATTTGTATGACGAAGATATCAGTGGAGTTGTATTTCAGGCCATGGAAGATGGCTTAGCGCCTCAGATGACTGCTCAGCGGATAGCAGAACTGGCACAACTAAGAGCAATGGATCATATCAAGTCTTCGCCTTTCTCTGATGGAGCTCGCGAGGCTGGATTTGATTACCATGGTGGGAAGCTGGACGACATCACCGTAGTTGTTTCTTACATAACAGAGTAAAATTGAAAATCCACACCATGTCACAATATTCAGTGATACTATTGGAACAGAATCAAAAGCTGAAGGAGAGTCATACAATACAGCAACTTTGATTTGTTTCTAAAACAAAGACACACAAATCAAAGACAAGAATGAGAAGGCTTCAGCAGCATCTTGGGTCTAGCTCAGTTCACCTCAGTTTGATACAAGTGTTTTACTTTATGAAATTCAAATAGCATGTTGGGATCATTAACATTTATTTGATGGAGGATTTTCTTCTGTATTTTTGTTTACTTAGTAGATACCATCAGG</genome_strand>
        <mrna_strand>CCGATTGAATAAGCTATATATATCTTTTTTTTAAAATCAAAAAGAAGAGAAAATCTACAGTGAACCCTTATATAAAAGCTTCCAATTTGCACCCTAGAGTGAAAAAGATTGCAGCTTTTGCATCCAAATAGTGAAAATTGAGGTATATTTGAAGTGGGGTTTGAGTAGAAAAGGATAAAGAGAGATTTATCAGGCAGCAAAGGCTTTGCCGCCGGTGAAAGAATTTCGTAAAACGAATAGCTAAGCAGTTATCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCTCCACTTGAAGTTTGCTGCTTCCCGAGCTACTTTTTTTATTGATACTCAGAAAGACATCATGGCTGTTTGTGGTTCAAGGACTCATATTGGGCATTTCGTTGGCAATATGACTGCTAGGCGCCTGCAGTGTAGTTTGTCAGTAAAGGGTTGTACTGTTTCTTACAACAAAAGAGGCTTACAAAATGTTAGTAAAGCTAACATCAATTTGGGAAACAAAGGACGGCCCAACAACTTCATGCTTTACCAATATTTGACGACTAATGTTGCAAAGAGGAGGACTAACCTCAATCCACACAAAGGCTTTGGATTGGAATGTTTTCGCAATTTATCCCACGAATGTTTCTATTCTGGAACTGCCTCTGCTTCTAATGTGTCTTCTGATAATTCTAAGGGCACGGAACAAGTTGTTGACGTTGTTAATTCTTCTGAAGCACAGATCCCCTTGCAGCTAAACTCGGGATCTTTTTACCTACCTCATCCTGCTAAAGCAAAAACTGGTGGAGAGGATGCTCATTTTATTTGTACCCTTACGCCAGCAATCGGTGTAGCTGATGGTGTTGGTGGATGGGCTGATCTTGGTATTGATGCTGGACTATATGCCCGTGAATTGATGTCTCACTCTTTATCTGCAATTCAAGATGAACCAAAAGGTTCTGTAGACCTAATCAGAGTGCTGGAGAAAGCTTACGTGAGAACAAAAGCAAAAGGCTCTTGTACAGCGTGTATCGTTGCACTCACTGAAGGGGGTCTTTATGCAGTTAATTTAGGAGATAGCGGATTTATGTTGGTTAGAAATGGATGTGCTGCATTTAAATCCCCTTCACAGCAGCATGGGTTTAATTTCCCATATCAACTAGATTGCAACAACGCAGGTGATTCACCTAGCTCTGCCATGGTATTCAAAATTACTGCTTTACCTGGAGATGTCCTAATTGTTGGTACAGATGGGCTTTTTGATAATTTGTATGACGAAGATATCAGTGGAGTTGTATTTCAGGCCATGGAAGATGGCTTAGCGCCTCAGATGACTGCTCAGCGGATAGCAGAACTGGCACAACTAAGAGCAATGGATCATATCAAGTCTTCGCCTTTCTCTGATGGAGCTCGCGAGGCTGGATTTGATTACCATGGTGGGAAGCTGGACGACATCACCGTAGTTGTTTCTTACATAACAGAGTAAAATTGAAAATCCACACCATGTCACAATATTCAGTGATACTATTGGAACAGAATCAAAAGCTGAAGGAGAGTCATACAATACAGCAACTTTGATTTGTTTCTAAAACAAAGACACACAAATCAAAGACAAGAATGAGAAGGCTTCAGCAGCATCTTGGGTCTAGCTCAGTTCACCTCAGTTTGATACAAGTGTTTTACTTTATGAAATTCAAATAGCATGTTGGGATCATTAACATTTATTTGATGGAGGATTTTCTTCTGTATTTTTGTTTACTTAGTAGATACCATCAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U564639" ref_strand="+" ref_description="SGN-U564639 Tomato 200607#2 [9 ESTs aligned] (*GB) gi|157343550|emb|CAO68056.1| (e_value=2e-89) unnamed; (*ATH) AT1G50910.1 (e_value=3e-74) | Symbol: None | expressed protein | chr1:18870751-18873507 REVERSE | Aliases: F8A12.13, F8A12_13; ">
      <seq>gttgctccgccgctcggagcacactagtcgccgatcgccgcccgtcgcccgccgccgccgccgcaatttttctttgttacagctgaaattatgggctcagagatggagatagtcgagcaaaggctaaacacttttgtaagtcagctgcagacagagtttgccattctcgatcgtctcgtttacaaaaataaaaaccagcatagaagatgctcatattttcagtacctcttaaaggtgcgaagagatgtgaagctcctccaaacaactaacttggaggaggttttgagtgactcctttcaagttcttaacggaaaaagacccaagcaaaaagtgcagcttctggaaagcctaaagaggagaagatctaatggtggcaaatataactttctggagcggcttttaggggttgcgcatctgttgtcacagatggttgagccagttttaagggccgcgtcggagatatccacacttcttgcacgatcattttttatgggattttcgctgacagtattgtccttgcttgcccgaataagagttctagttcagcaaattcttctagatgttgtttgtgtattcaacaatgtttcctctttatcacagagggaacaagccatcaaattgactcaagatggttttgaggtttttagagaatattttccgccaaagcagcaggtggtcttcctcgaatgtatttgggaatctgataagtatatgttagttgagagacaaaatcagaaagatgttggaagccaggaaaaggatgttggagaagatgtttctgtagaagcatctaaggttcagtatgaaagcattgggcttttcctaggagatgatgaacctggacagacggcctctaaagattcagctgaggatggtcaaactatgaaggacaacgatatagtagattccttggaggatcctatccaagatagtaatgatgaatctcaagctcaagttgattcaactattgcagaaccttctggaaataattttgatgctcctgaagccggagcacttccaagttcatcacgagacaagaatccttcaaaagccaaacatggatcaagaaatagcgttgcatttgtttcagtaaaaagacccaaactgtcaacaaacaatgagttggggtttgacattcatagaacagaaaaggttgataatcctggtgtagataaagaagatccatttttcagtttactttttagtggaaatgtgaagagcagtctattctgaacttcacctaaatagtttttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="-" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="82750" stop="77340"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82451" g_stop="82390" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82389" i_stop="82340" i_length="50">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.92"/>
          </gDNA_intron_boundary>
          <shorter_than_min_intron_len/>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82339" g_stop="82169" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="234" r_length="172" r_score="0.977"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82168" i_stop="81412" i_length="757">
            <donor d_prob="0.750" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="81411" g_stop="81299" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="235" r_stop="347" r_length="113" r_score="0.991"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="81298" i_stop="80685" i_length="614">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="80684" g_stop="80606" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="348" r_stop="426" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="80605" i_stop="80033" i_length="573">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="80032" g_stop="80004" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="427" r_stop="455" r_length="29" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="80003" i_stop="79510" i_length="494">
            <donor d_prob="0.990" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="79509" g_stop="79416" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="549" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="79415" i_stop="79023" i_length="393">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.539" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="79022" g_stop="78933" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="550" r_stop="639" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="78932" i_stop="78689" i_length="244">
            <donor d_prob="0.714" d_score="1.00"/>
            <acceptor a_prob="0.858" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="78688" g_stop="78499" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="640" r_stop="829" r_length="190" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="78498" i_stop="78065" i_length="434">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="78064" g_stop="77640" g_length="425"/>
          <reference_exon_boundary r_type="cDNA" r_start="830" r_stop="1254" r_length="425" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="-" ref_id="SGN-U564639" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>1253</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U564639" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82451" e_stop="82390"/>
          <exon e_start="82339" e_stop="82169"/>
          <exon e_start="81411" e_stop="81299"/>
          <exon e_start="80684" e_stop="80606"/>
          <exon e_start="80032" e_stop="80004"/>
          <exon e_start="79509" e_stop="79416"/>
          <exon e_start="79022" e_stop="78933"/>
          <exon e_start="78688" e_stop="78499"/>
          <exon e_start="78064" e_stop="77640"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGCTCCGCCGCTCGGAGCACACTAGTCGCCGATCGCCGCCCGTCGCCCGCCGCCGCCGCCGCAAGTATTTATACTGTCTGCTTAGTTTCTGAATTTATGAAGTCTTATTG-TAGTTTTTCTTTGTTACAGCTGAAATTATGGGCTCAGAGATGGAGATAGTCGAGCAAAGGCTAAACACTTTTGTAAGTCAGCTGCAGACAGAGTTTGCCATTCTCGATCGTCTCGTTTACAAAAATAAAAACCAGCATAGAAGATGCTCATATTTTCAGTACCTCTTAAAGGTTGTATTTTTAACTATATTTTTTCATATATGTATGTGTAATGAGCTTATTCTAGTAGTTTCTTGTCCTATGATTTCTGTTATTATTCGTTGTTTCAGGTGCTTAGGTTACACATTATTTAGCTACTGCTATTGTTCCTTGTCTTTACTTTTGTTTGGTATGTGTTATTTGAACCAAGGGTATTTTAGAAACAACCTCTTTGCTTTGTGTTCTTTGAGTATGTTTCTGCCCTAAACTAAGAAAGGGTATAATGCTCGTTTTGATAAGAGTATTGCATACTATCTGCTGGAATGTTTTGGACGTCTTTCTTATGCAACTATGGGAATTTCTTCTAGTGCGCTACTATCTTTTACTACAGCTCATGGCTGTCCTTGAACTGGCCAAAGAGCTTTCTATTTGAATGGAATTCCACAATTTCATAAGATTCGATCTAGAATGATTATACTTTGGTTAATTGGTTAGGTGTCGATAGCAGCAGAACCTTTGTTTTGGTCTATACTATGCATAGGGGTACCTATGGCATTACTGGGTATGTTGTTGTTGTTGTTGTTGTAATGGGCTTTGCTTTGTTTTAAACACAAAGAACTGTCATAGAAGATGTTCCTATTTCCAATACCCCTCAAAGGTTGTTACCAAGGTTATTTCACATATGTATTATTTGCATTGGGTTTTGGGGGGGGGGGGGGGGAATTGATGGGGTTTGCTCTATGTCCTAAGTGCAAATGCTTAGTTTATATGTTCGTTTTGATGATATTAGGTGCGAAGAGATGTGAGGCTCCTCCAAACAACTAACTTGGAGGAGGTTTTGAGTGACTCCTTTCAAGTTCTTAACGGAAAAAGACCCAAGCAAAAAGTGCAGCTTCTGGAAAGGTACTCTTGACCCCTTTAAAGCACCTATATTTTGTTTTGAGATTTTGATTATTATAGTATTTCTAGTGATGATATGGCAAGAATGGAATTTGATTACGTCATAAATGTACCCACTTTTTCATATCTACCAATGAGTAAATTTTGATTGGAGAGTGAGTCCTTATCATACTCTTGACAGTTTTTTGTTCCTATATTGATAACTACCACTTTCTGCCATTGAAACAATTGAACTGACACACAGGGAAGCTTAAAACTTAAATTGTCTTCCTTTTTTATATGATTTTCATCAATAATCATCCATCTCTTTGTATGAAACTGTTTGCTGATTATGATTGTTGAATGCTGTTTGATTGCTAAAAATTGGGTGTTTATGTGAGCTATAACAACATTTTTGCAAGTTCCATCCATCTTATCATTAACCGACAGATTGGATGTTAATACTCTAACCAGTAAGAAGGGAGACTAGTTGTATTGATCCCAGTCCACTGTCATGGAAATAGAATTGCCATTATTTATGTCTTGCTCTTCATATACGAACTCCCACTGCCGCTGTTCTAACCTATGATGATTTTATATTAAATTGAACTTTCACCCTCATTTTTCATTGGCCTCAGCCTAAAGAGGAGAAGATCTAATGGTGGCAAATATAACTTTCTGGAGCGGCTTTTAGGGGTTGCGCATCTGTTGTCACAGGTATCATTGTTTCTTTCATTATTACTTCTTGTTGTTCTGCACCTAAAACCGCTCATCCATGTCTCTAAGTAACTCATGTTAGCGAAGCTCACTTGCTATCATTTACTGGCAATATTCCCCTGTTTTCATGAATAAAAAGGGAAGCTTGGTGCACAAAACACTCTGTGTTCACATAAAGTCTTGGTAAGGGCCACATCCCGAAGGGGTGTAACATATGCTAATGCAAGCCTTAGTGGTCAATTCCACGCACGAACCTATGACCTATAGGCACACAGAGACACCTTATCATTGCTCCAAGATTCCATGTATACCAGTAGCACATGTTAGGACATGTGTTTAGAGTCTCTTAAGTATTGAATATAGTACTGAGATTCATGTAGCCGATCCTAATTCACCTAGTATTGATGCATAGTTATTGTTGTTCCATATAACAACAGGAATGATGATCTCTGTCTCTCTCTCTAATCAAGCATCTTAATATAGGGGGCTTAATAAGAATCATTTTACAAGGAGAACTTCAAGCTATCATCTTATAAAGTAGTAATTCCTAATTCACTTGTTTGTTTCTTGCAGATGGTTGAGCCAGTTTTAAGGGCCGCGTCGTATCCTTCTTACTTCTTTTTTGCGCACTAATCCTTCATTTTTTATGTTGTTTATGGGACAAGATTTACTTAAATAATAGGAAGAGATTAAGTTGTTCATTTTCTTTCATAGCTCTTTGGGTGTGTTAGGTGATTGGAATAAATGAGGTTATGTTTTGAAATACAGTGAGTGCTTATTTAGCTACATATAACAAAACCTTTTCTGTTCTACAAATTACTAGAGTTCTGCACAGCTGATTTGCCGTAAACATATCGGTTTGATAAATTGGTGTTGTTGGATATTAATAGTACTTCCTTTCTTCCTTGTTTTTTTCCATATATTCATAATTGCACATGTCCTATCTTCGTCTCATTTGGTAAGATGACTTTGTTTTTCATCTGTGCTGATTGCTTTTCATTTCAAAGTAAACACTTGATCAATGTTCCTGTTTTATGTAAATTCCAATGTGGATTTTTAGCCATTAATGATTGTTTCTACCCTTAACAGTAGACAGGGAGATATCCACACTTCTTGCACGATCATTTTTTATGGGATTTTCGCTGACAGTATTGTCCTTGCTTGCCCGAATAAGAGTTCTAGTTCAGCAAGTAAGTATTCTCAGTGTGATTTTATCATTTTCAGAACTGTGAAATGGTATGTGCACTCATGAAGAATGACACCATTTTAAAGCTCATTCCTTCGTCATACTTCTTATAGTAAAGGTCTTGCACATGGATTGCGTTCTTTTGAAATTTGAGTTTGTTGAAGTTTTAGTTTCCAGTATAATACACTGGAGTCATGTTAGTTTCTGGAGCTTATTATATGGAGTAACTAGTCTAACTCAAGAGTCAAGGGTACTGGGTCATGTATGACATGGGACTTTTTGCTCTTCTAGGAGCATTCAATATTTAAGGAGTTGTAAATCTTATGCTGAGCAAATTTTCTAAGGATATCTAGTGATTGAACAGGACATTTAATCAAAATTTCTCTATTTATTGCAGATTCTTCTAGATGTTGTTTGTGTATTCAACAATGTTTCCTCTTTATCACAGAGGGAACAAGCCATCAAATTGACTCAAGATGGTTTTGAGGTTGTTTCTTTGCTACTGACCACTCTCTGTTTTTCTGATGCAATGGAAGAAATTCTTTTCCTTCCTTATATTCGCTTTGTTTACTAGCTTTTTTGATTGGTTTTTAATTAGTTCTGTTAAGGTCAAGAAATGGTTGGTAAAGTTATGTTGAGATAGGAAAATTGATAGTACTTCCTTGATAGTCGTTAATAACAACTCTAAGATGAAATCAAAGAAGCAAATGTTCAATAATTTGGCATTGCAGGTTTTTAGAGAATATTTTCCGCCAAAGCAGCAGGTGGTCTTCCTCGAATGTATTTGGGAATCTGATAAGTATATGTTAGTTGAGAGACAAAATCAGAAAGATGTTGGAAGCCAGGAAAAGGATGTTGGAGAAGATGTTTCTGTAGAAGCATCTAAGGTTCAGTATGAAAGCATTGGGCTTTTCCTAGGAGGTAACCATGAACCCAAGTTCTTTTTACTGTCTTTGTTTCCTTTATCAAGTCATATTCTATCAGTTTGAGATAGAAGTGAACTGAAGGTTGCATGTGATGATTTCATTTAAAGATAGCATTATCCTGTGTTTTTCTGTTTGCCAGTTTTTATCGTTAAAAAAGGGCAGCCTAATGCACGAAACATCTGGTAGTTCACATAGGATTTGGGGAATGGACACATACCTAGGGGATGTAGTATAGGCAGCGTACCTGACACCAGTTTTAGTTATTCAGTTTGACAATAAAGTTCATGGAAGACGTGTCTGTTGCATATCTTTCTAGTGTATTCATATATCTATTGCTTCTTACTCCTTACAATCAAGTTCTTCGTTTGTTGCTGGAATTCAGTGTCATTCGTCTATAATTTTGTAAACTTTTTTCGGGATCTTGTGTAGATGATGAACCTGGACAGACGGCCTCTAAAGATTCAGCTGAGGATGGTCAAACTATGAAGGACAACGATATAGTAGATTCCTTGGAGGATCCTATCCAAGATAGTAATGATGAATCTCAAGCTCAAGTTGATTCAACTATTGCAGAACCTTCTGGAAATAATTTTGATGCTCCTGAAGCCGGAGCACTTCCAAGTTCATCACGAGACAAGAATCCTTCAAAAGCCAAACATGGATCAAGAAATAGCGTTGCATTTGTTTCAGTAAAAAGACCCAAACTGTCAACAAACAATGAGTTGGGGTTTGACATTCATAGAACAGAAAAGGTTGATAATCCTGGTGTAGATAAAGAAGATCCATTTTTCAGTTTACTTTTTAGTGGAAATGTGAAGAGCAGTCTATTCTGAACTTCACCTAAATAGTTTTTC</genome_strand>
        <mrna_strand>GTTGCTCCGCCGCTCGGAGCACACTAGTCGCCGATCGCCGCCCGTCGCCCGCCGCCGCCGCC..................................................GCAATTTTTCTTTGTTACAGCTGAAATTATGGGCTCAGAGATGGAGATAGTCGAGCAAAGGCTAAACACTTTTGTAAGTCAGCTGCAGACAGAGTTTGCCATTCTCGATCGTCTCGTTTACAAAAATAAAAACCAGCATAGAAGATGCTCATATTTTCAGTACCTCTTAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGAAGAGATGTGAAGCTCCTCCAAACAACTAACTTGGAGGAGGTTTTGAGTGACTCCTTTCAAGTTCTTAACGGAAAAAGACCCAAGCAAAAAGTGCAGCTTCTGGAAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTAAAGAGGAGAAGATCTAATGGTGGCAAATATAACTTTCTGGAGCGGCTTTTAGGGGTTGCGCATCTGTTGTCACAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTTGAGCCAGTTTTAAGGGCCGCGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGATATCCACACTTCTTGCACGATCATTTTTTATGGGATTTTCGCTGACAGTATTGTCCTTGCTTGCCCGAATAAGAGTTCTAGTTCAGCAA.........................................................................................................................................................................................................................................................................................................................................................................................................ATTCTTCTAGATGTTGTTTGTGTATTCAACAATGTTTCCTCTTTATCACAGAGGGAACAAGCCATCAAATTGACTCAAGATGGTTTTGAG....................................................................................................................................................................................................................................................GTTTTTAGAGAATATTTTCCGCCAAAGCAGCAGGTGGTCTTCCTCGAATGTATTTGGGAATCTGATAAGTATATGTTAGTTGAGAGACAAAATCAGAAAGATGTTGGAAGCCAGGAAAAGGATGTTGGAGAAGATGTTTCTGTAGAAGCATCTAAGGTTCAGTATGAAAGCATTGGGCTTTTCCTAGGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGATGAACCTGGACAGACGGCCTCTAAAGATTCAGCTGAGGATGGTCAAACTATGAAGGACAACGATATAGTAGATTCCTTGGAGGATCCTATCCAAGATAGTAATGATGAATCTCAAGCTCAAGTTGATTCAACTATTGCAGAACCTTCTGGAAATAATTTTGATGCTCCTGAAGCCGGAGCACTTCCAAGTTCATCACGAGACAAGAATCCTTCAAAAGCCAAACATGGATCAAGAAATAGCGTTGCATTTGTTTCAGTAAAAAGACCCAAACTGTCAACAAACAATGAGTTGGGGTTTGACATTCATAGAACAGAAAAGGTTGATAATCCTGGTGTAGATAAAGAAGATCCATTTTTCAGTTTACTTTTTAGTGGAAATGTGAAGAGCAGTCTATTCTGAACTTCACCTAAATAGTTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U595212" ref_strand="+" ref_description="SGN-U595212 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gttttaagggccgcgtcgtatccttcttacttcttttttgcgcactaatccttcattttttatgttgtttatgggacaagatttacttaaataataggaagagattaagttgttcattttctttcatagctctttgggtgtgttaggtgattggaataaatgaggttatgttttgaaatacagtgagtgcttatttagctacatataacaaaaccttttctgttctacaaattactagagttctgcacagctgatttgccgtaaacatatcggtttgataaattggtgttgttggatattaatagtacttcctttcttccttgtttttttccatatattcataattgcacatgtcctatcttcgtctcatttggtaagatgactttgtttttcatctgtgctgattgcttttcatttcaaagtaaacacttgatcaatgttcctgttttatgtaaattccaatgtggatttttagccattaatgattgtttctacccttaacagtagacagggagatatccacacttcttgcacgatcattttttatggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="-" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="80320" stop="79170"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80020" g_stop="79470" g_length="551"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="551" r_length="551" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="-" ref_id="SGN-U595212" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>551</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U595212" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80020" e_stop="79470"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTAAGGGCCGCGTCGTATCCTTCTTACTTCTTTTTTGCGCACTAATCCTTCATTTTTTATGTTGTTTATGGGACAAGATTTACTTAAATAATAGGAAGAGATTAAGTTGTTCATTTTCTTTCATAGCTCTTTGGGTGTGTTAGGTGATTGGAATAAATGAGGTTATGTTTTGAAATACAGTGAGTGCTTATTTAGCTACATATAACAAAACCTTTTCTGTTCTACAAATTACTAGAGTTCTGCACAGCTGATTTGCCGTAAACATATCGGTTTGATAAATTGGTGTTGTTGGATATTAATAGTACTTCCTTTCTTCCTTGTTTTTTTCCATATATTCATAATTGCACATGTCCTATCTTCGTCTCATTTGGTAAGATGACTTTGTTTTTCATCTGTGCTGATTGCTTTTCATTTCAAAGTAAACACTTGATCAATGTTCCTGTTTTATGTAAATTCCAATGTGGATTTTTAGCCATTAATGATTGTTTCTACCCTTAACAGTAGACAGGGAGATATCCACACTTCTTGCACGATCATTTTTTATGGGA</genome_strand>
        <mrna_strand>GTTTTAAGGGCCGCGTCGTATCCTTCTTACTTCTTTTTTGCGCACTAATCCTTCATTTTTTATGTTGTTTATGGGACAAGATTTACTTAAATAATAGGAAGAGATTAAGTTGTTCATTTTCTTTCATAGCTCTTTGGGTGTGTTAGGTGATTGGAATAAATGAGGTTATGTTTTGAAATACAGTGAGTGCTTATTTAGCTACATATAACAAAACCTTTTCTGTTCTACAAATTACTAGAGTTCTGCACAGCTGATTTGCCGTAAACATATCGGTTTGATAAATTGGTGTTGTTGGATATTAATAGTACTTCCTTTCTTCCTTGTTTTTTTCCATATATTCATAATTGCACATGTCCTATCTTCGTCTCATTTGGTAAGATGACTTTGTTTTTCATCTGTGCTGATTGCTTTTCATTTCAAAGTAAACACTTGATCAATGTTCCTGTTTTATGTAAATTCCAATGTGGATTTTTAGCCATTAATGATTGTTTCTACCCTTAACAGTAGACAGGGAGATATCCACACTTCTTGCACGATCATTTTTTATGGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U595465" ref_strand="+" ref_description="SGN-U595465 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|6174913|sp|P14280|PME1_SOLLC (e_value=4e-72) Pectinesterase-1; (*ATH) AT1G11580.1 (e_value=5e-17) | Symbol: None | pectin methylesterase, putative, similar to pectin methylesterase GI:1617583 from (Lycopersicon esculentum) | chr1:3888690-3890811 FORWARD | Aliases: T23J18.24, T23J18_24, ATPMEPCRA; (*SWP) sp|P14280|PME1_SOLLC (e_value=3e-73) Pectinesterase-1 OS=Solanum lycopersicum GN=PME1.9; ">
      <seq>atatccaatggaaccgtcacaacataatcagatggacataccattctgatgaaatatttagttaactatgtccatcaaatgaacaatgcacttccagtggttcgcaaaatgaagaatcagatcaatgacattactcaacacggaggtttcaccgatagaaatgagcttcttgatcagtcagttgattacgcatctgattcaattgccccaattgataaaagaagtcaatcggagcatgccaatgcgcaaagatggctaagtggtgtgcttactaaccacgttacgtgcttggatgagcttgattcctttactaaagctatgataaatggaacgaatcttgaagagttgatctcgagagctaaggtagcattagcgatgcttgcgtctttgacaactcaggatgaggatgttttcatgacggttttaggaaaaatgccatcttgggtgagttcgatggatagga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="-" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="93223" stop="92161"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92923" g_stop="92461" g_length="463"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="463" r_length="463" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="-" ref_id="SGN-U595465" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>463</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U595465" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92923" e_stop="92461"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATCCAATGAAATTGTCACAACAGAATCAGATGGACATAGTATTCTGATGAAATTTTTAGTTAACTATGTCCATCAAATGAACAATGCAATTCCAGTGGTTCGCAAAATGAAGAATCAGATCAATGACATTCGTCAACACGGGGCTTTAACTGATTGTCTTGAGCTTCTTGATCAGTCAGTTGATTTCGCATCTGATTCAATTGCAGCAATTGATAAAAGAAGTCGCTCGGAGCATGCCAATGCGCAAAGTTGGCTAAGTGGTGTGCTTACTAACCACGTTACGTGCTTGGATGAGCTTGATTCCTTTACTAAAGCTATGATAAATGGAACGAATCTTGAAGAGTTGATCTCGAGAGCTAAGGTAGCATTAGCGATGCTTGCGTCTTTGACAACTCAGGATGAGGATGTTTTCATGACGGTTTTAGGAAAAATGCCATCTTGGGTGAGTTCGATGGATAGGA</genome_strand>
        <mrna_strand>ATATCCAATGGAACCGTCACAACATAATCAGATGGACATACCATTCTGATGAAATATTTAGTTAACTATGTCCATCAAATGAACAATGCACTTCCAGTGGTTCGCAAAATGAAGAATCAGATCAATGACATTACTCAACACGGAGGTTTCACCGATAGAAATGAGCTTCTTGATCAGTCAGTTGATTACGCATCTGATTCAATTGCCCCAATTGATAAAAGAAGTCAATCGGAGCATGCCAATGCGCAAAGATGGCTAAGTGGTGTGCTTACTAACCACGTTACGTGCTTGGATGAGCTTGATTCCTTTACTAAAGCTATGATAAATGGAACGAATCTTGAAGAGTTGATCTCGAGAGCTAAGGTAGCATTAGCGATGCTTGCGTCTTTGACAACTCAGGATGAGGATGTTTTCATGACGGTTTTAGGAAAAATGCCATCTTGGGTGAGTTCGATGGATAGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U595468" ref_strand="+" ref_description="SGN-U595468 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|6174913|sp|P14280|PME1_SOLLC (e_value=4e-49) Pectinesterase-1; (*SWP) sp|P14280|PME1_SOLLC (e_value=2e-50) Pectinesterase-1 OS=Solanum lycopersicum GN=PME1.9; ">
      <seq>gcaaacttctaaaatggctaatcctcaacaacctttgccaataaaggcacacagacaaaatccaatagtcagcttcaagatcctcagctttgttataactttgggcgaagctctcttcttagatgctccatatcaaattgagattaaacatcctaatctatgtaaaactgcacaagattcccaactctgactcagctatgtctctgatttgatatccaatgaaattgccacagcagaatcagatggacatagtattctgatgaaatctttagttaactatgtccatcaaatgaacaatgcaatttcagtggttcgcaaaatgaagaatcagatcaatgacattcgtcaacacggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="-" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="93434" stop="92480"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93134" g_stop="92780" g_length="355"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="355" r_length="355" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="-" ref_id="SGN-U595468" ref_strand="+">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>355</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U595468" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93134" e_stop="92780"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAACTTCTAAAATGGCTAATCCTCAACAACCTTTGTTAATAAAAACACACAAACAAAATCCAATAATCAGCTTCAAGATCCTCAGTTTTGTTATAACTTTGTTTGTTGCTCTCTTCTTAGTTGCTCCATATCAAGTTGAGATTAAACATTCTAATCTATGTAAAACTGCACAAGATTCCCAACTCTGTCTCAGTTATGTCTCTGATTTGATATCCAATGAAATTGTCACAACAGAATCAGATGGACATAGTATTCTGATGAAATTTTTAGTTAACTATGTCCATCAAATGAACAATGCAATTCCAGTGGTTCGCAAAATGAAGAATCAGATCAATGACATTCGTCAACACGGG</genome_strand>
        <mrna_strand>GCAAACTTCTAAAATGGCTAATCCTCAACAACCTTTGCCAATAAAGGCACACAGACAAAATCCAATAGTCAGCTTCAAGATCCTCAGCTTTGTTATAACTTTGGGCGAAGCTCTCTTCTTAGATGCTCCATATCAAATTGAGATTAAACATCCTAATCTATGTAAAACTGCACAAGATTCCCAACTCTGACTCAGCTATGTCTCTGATTTGATATCCAATGAAATTGCCACAGCAGAATCAGATGGACATAGTATTCTGATGAAATCTTTAGTTAACTATGTCCATCAAATGAACAATGCAATTTCAGTGGTTCGCAAAATGAAGAATCAGATCAATGACATTCGTCAACACGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U580030" ref_strand="+" ref_description="SGN-U580030 Tomato 200607#2 [241 ESTs aligned] (*GB) gi|30013665|gb|AAP03875.1| (e_value=2e-172) putative chloroplast thiazole biosynthetic protein [Nicotiana tabacum]; (*ATH) AT5G54770.1 (e_value=1e-141) | Symbol: None | thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4), identical to SP:Q38814 Thiazole biosynthetic enzyme, chloroplast precursor (ARA6) {Arabidopsis thaliana} | chr5:22263821-22265558 FORWARD | Aliases: MBG8.3, MBG8_3; (*SWP) sp|O23787|THI4_CITSI (e_value=2e-153) Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1; ">
      <seq>tcatcactcagctctacacttgtcactcccctatatatatccttcttcttccccttccatttccacactcaaaactcaaaacacaatcttctccgccctaaatcccagttctcaattcttctccatcaatggcttccaccttagcttcctctgttatttccaagactaatttcattgacacacacaaatcatccttctatggcgttccaatttcatcacaaactcgattgaaaatcgttaaatcgactccacaaaacatgtctgtttccatgtctgctgatgcttctcctccttacgatctcggaagtttcagttttaatccgattaaggaatcgattgttgctcgcgaaatgactcggaggtatatgacggatatgattacttatgctgatactgatgttgtcattgttggtgctggatctgctggtttatcttgtgcttatgaactcagcaagaaccctaatgttcaggtggctattcttgagcaatctgtgagccctggtggaggtgcttggctaggtggacaactcttctctgctatggttgtgcgtaagccagcacatcttttcttgaacgagctaggcattgactacgacgagcaagacaactacgtggtcatcaaacacgctgccttgttcacctcaaccatcatgagcaagcttttggccaggccaaatgtgaagctcttcaatgctgttgcaacagaggaccttatcgtgaagaacggaagagtcggtggtgttgtcactaactggtctttggtttcccagaaccacgacacacaatcctgcatggaccctaatgttatggaggctaagattgtggtcagctcttgtggccacgacggccccatgggcgccaccggtgttaagaggctcaggagcattggcatgatcaacagtgtccctggaatgaaagctttggacatgaacgctgctgaggacgcgattgttagacttaccagagaggtcgtacctggtatgattgtcacaggaatggaagttgctgaaattgatggagcaccacgaatgggtccaacttttggagctatgatgatatcaggacagaaggcagctcacctcgccctacgagcgttgggattgcccaacgcccttgatggaactgcagaaacaagcgtcctcccggagcttatgttggctgcagctgatgaagctgaaattgctgatgcttgaatgtaattatagttttctaagcaaggattatgagaaatattagtttttcctagataagtgagtatggttgtggtggtgatgataaattggtaaggggatgatgaataagagtcttcaagatgaaagtcattgtgttaactttggctattttattttgatttatttctatttcgaaacttttatggaagaaagtagattttagttttggtcgttccttgaataatcttttaggccttttgggctttgtacttgatatggtttgggcctcattggagaagccatatgaatgaacattgtgattgggctaagatgtttttgcactaatggccttttgaggattaaaaaacgcttccattaggactcaacaacaatcttcttggatggatccttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="-" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="103132" stop="100392"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102832" g_stop="102363" g_length="470"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="470" r_length="470" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102362" i_stop="101874" i_length="489">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101873" g_stop="101313" g_length="561"/>
          <reference_exon_boundary r_type="cDNA" r_start="471" r_stop="1031" r_length="561" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101312" i_stop="101210" i_length="103">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101209" g_stop="100711" g_length="499"/>
          <reference_exon_boundary r_type="cDNA" r_start="1032" r_stop="1530" r_length="499" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="-" ref_id="SGN-U580030" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1530</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U580030" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102832" e_stop="102363"/>
          <exon e_start="101873" e_stop="101313"/>
          <exon e_start="101209" e_stop="100711"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATCACTCAGCTCTACACTTGTCACTCCCCTATATATATCCTTCTTCTTCCCCTTCCATTTCCACACTCAAAACTCAAAACACAATCTTCTCCGCCCTAAATCCCAGTTCTCAATTCTTCTCCATCAATGGCTTCCACCTTAGCTTCCTCTGTTATTTCCAAGACTAATTTCATTGACACACACAAATCATCCTTCTATGGCGTTCCAATTTCATCACAAACTCGATTGAAAATCGTTAAATCGACTCCACAAAACATGTCTGTTTCCATGTCTGCTGATGCTTCTCCTCCTTACGATCTCGGAAGTTTCAGTTTTAATCCGATTAAGGAATCGATTGTTGCTCGCGAAATGACTCGGAGGTATATGACGGATATGATTACTTATGCTGATACTGATGTTGTCATTGTTGGTGCTGGATCTGCTGGTTTATCTTGTGCTTATGAACTCAGCAAGAACCCTAATGTTCAGGTATAACTTCTTTTTTTTTTTTAAATTATTAATACCGAGTTCTTATAGCGTTTTTGAATTAACATACAATAAAAATTGGGTTTATCGTTGATACTAGACTTTTATCTGCAATTCGAATTCGATCTAGATTTGATATATGATAAATCAAGGCTCAGGTGACTTGTTCTGGCCTCGATTGTATCCCTCTCTTGCAAATTCACGTGATACTGATTGACTTGACATCACGAATTTTGAATTTTATCGGCTCAAAAGAAAACACAGGTTTCCTGTTAAAAGTATTTTACAACTTTACTTTTACTCATAAATCATGTGATACTTTTGTCCTTAGCCTAATTTGCTAGTATTAATTTGAGTGGGGCAATTCACACGTAACACACCATTCGCGATCACAATGAACTCATTTGATGTTCTGATAGCTATAATTTTGGTAGATTACAATATCTATGTTCTTCAATTTGTTGTTTATGTGAATTTACTTTATATGTATAGGTGGCTATTCTTGAGCAATCTGTGAGCCCTGGTGGAGGTGCTTGGCTAGGTGGACAACTCTTCTCTGCTATGGTTGTGCGTAAGCCAGCACATCTTTTCTTGAACGAGCTAGGCATTGACTACGACGAGCAAGACAACTACGTGGTCATCAAACACGCTGCCTTGTTCACCTCAACCATCATGAGCAAGCTTTTGGCCAGGCCAAATGTGAAGCTCTTCAATGCTGTTGCAACAGAGGACCTTATCGTGAAGAACGGAAGAGTCGGTGGTGTTGTCACTAACTGGTCTTTGGTTTCCCAGAACCACGACACACAATCCTGCATGGACCCTAATGTTATGGAGGCTAAGATTGTGGTCAGCTCTTGTGGCCACGACGGCCCCATGGGCGCCACCGGTGTTAAGAGGCTCAGGAGCATTGGCATGATCAACAGTGTCCCTGGAATGAAAGCTTTGGACATGAACGCTGCTGAGGACGCGATTGTTAGACTTACCAGAGAGGTCGTACCTGGTATGATTGTCACAGGAATGGAAGTTGCTGAAATTGATGGAGCACCACGAATGGTTAGTATGAAATACTTGAACTCCTATATTGTATAAACTCATAATTAGAAGTTAGAAAAGCAACAAACAATTCAACTAATTGGAGATGTTATACATTGTACAGGGTCCAACTTTTGGAGCTATGATGATATCAGGACAGAAGGCAGCTCACCTCGCCCTACGAGCGTTGGGATTGCCCAACGCCCTTGATGGAACTGCAGAAACAAGCGTCCTCCCGGAGCTTATGTTGGCTGCAGCTGATGAAGCTGAAATTGCTGATGCTTGAATGTAATTATAGTTTTCTAAGCAAGGATTATGAGAAATATTAGTTTTTCCTAGATAAGTGAGTATGGTTGTGGTGGTGATGATAAATTGGTAAGGGGATGATGAATAAGAGTCTTCAAGATGAAAGTCATTGTGTTAACTTTGGCTATTTTATTTTGATTTATTTCTATTTCGAAACTTTTATGGAAGAAAGTAGATTTTAGTTTTGGTCGTTCCTTGAATAATCTTTTAGGCCTTTTGGGCTTTGTACTTGATATGGTTTGGGCCTCATTGGAGAAGCCATATGAATGAACATTGTGATTGGGCTAAGATGTTTTTGCACTAATGGCCTTTTGAGG</genome_strand>
        <mrna_strand>TCATCACTCAGCTCTACACTTGTCACTCCCCTATATATATCCTTCTTCTTCCCCTTCCATTTCCACACTCAAAACTCAAAACACAATCTTCTCCGCCCTAAATCCCAGTTCTCAATTCTTCTCCATCAATGGCTTCCACCTTAGCTTCCTCTGTTATTTCCAAGACTAATTTCATTGACACACACAAATCATCCTTCTATGGCGTTCCAATTTCATCACAAACTCGATTGAAAATCGTTAAATCGACTCCACAAAACATGTCTGTTTCCATGTCTGCTGATGCTTCTCCTCCTTACGATCTCGGAAGTTTCAGTTTTAATCCGATTAAGGAATCGATTGTTGCTCGCGAAATGACTCGGAGGTATATGACGGATATGATTACTTATGCTGATACTGATGTTGTCATTGTTGGTGCTGGATCTGCTGGTTTATCTTGTGCTTATGAACTCAGCAAGAACCCTAATGTTCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCTATTCTTGAGCAATCTGTGAGCCCTGGTGGAGGTGCTTGGCTAGGTGGACAACTCTTCTCTGCTATGGTTGTGCGTAAGCCAGCACATCTTTTCTTGAACGAGCTAGGCATTGACTACGACGAGCAAGACAACTACGTGGTCATCAAACACGCTGCCTTGTTCACCTCAACCATCATGAGCAAGCTTTTGGCCAGGCCAAATGTGAAGCTCTTCAATGCTGTTGCAACAGAGGACCTTATCGTGAAGAACGGAAGAGTCGGTGGTGTTGTCACTAACTGGTCTTTGGTTTCCCAGAACCACGACACACAATCCTGCATGGACCCTAATGTTATGGAGGCTAAGATTGTGGTCAGCTCTTGTGGCCACGACGGCCCCATGGGCGCCACCGGTGTTAAGAGGCTCAGGAGCATTGGCATGATCAACAGTGTCCCTGGAATGAAAGCTTTGGACATGAACGCTGCTGAGGACGCGATTGTTAGACTTACCAGAGAGGTCGTACCTGGTATGATTGTCACAGGAATGGAAGTTGCTGAAATTGATGGAGCACCACGAATG.......................................................................................................GGTCCAACTTTTGGAGCTATGATGATATCAGGACAGAAGGCAGCTCACCTCGCCCTACGAGCGTTGGGATTGCCCAACGCCCTTGATGGAACTGCAGAAACAAGCGTCCTCCCGGAGCTTATGTTGGCTGCAGCTGATGAAGCTGAAATTGCTGATGCTTGAATGTAATTATAGTTTTCTAAGCAAGGATTATGAGAAATATTAGTTTTTCCTAGATAAGTGAGTATGGTTGTGGTGGTGATGATAAATTGGTAAGGGGATGATGAATAAGAGTCTTCAAGATGAAAGTCATTGTGTTAACTTTGGCTATTTTATTTTGATTTATTTCTATTTCGAAACTTTTATGGAAGAAAGTAGATTTTAGTTTTGGTCGTTCCTTGAATAATCTTTTAGGCCTTTTGGGCTTTGTACTTGATATGGTTTGGGCCTCATTGGAGAAGCCATATGAATGAACATTGTGATTGGGCTAAGATGTTTTTGCACTAATGGCCTTTTGAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U590777" ref_strand="+" ref_description="SGN-U590777 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|30013665|gb|AAP03875.1| (e_value=3e-78) putative chloroplast thiazole biosynthetic protein [Nicotiana tabacum]; (*ATH) AT5G54770.1 (e_value=6e-73) | Symbol: None | thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4), identical to SP:Q38814 Thiazole biosynthetic enzyme, chloroplast precursor (ARA6) {Arabidopsis thaliana} | chr5:22263821-22265558 FORWARD | Aliases: MBG8.3, MBG8_3; (*SWP) sp|O23787|THI4_CITSI (e_value=3e-75) Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1; ">
      <seq>cccgtaaagagcacatcttttcttgaacgagctaggcattgacctttacgagcaagacaactacgtggtcatcaaacacgctgccttgttcacctcaaccatcatgagcaagcttttggccaggccaaatgtgaagctcttcaatgctgttgcaacagaggaccttatcgtgaagaacggaagagtcggtggtgttgtcactaactggtctttggtttcccagaaccacgacacacaatcctgcatggaccctaatgttatggaggctaagattgtggtcagctcttgtggccacgacggccccatgggcgccaccggtgttaaaaggctcaggagcattggcatgatcaacagtgtccctggaatgaaagctttggacatgaacgctgctgaggacgcgattgttagacttgccatagaggtcgtacctggtataagtgtcacaggaatggaagatgctgaaggtgatggagcacgactaatgggtccaacttttggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="-" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="102087" stop="100894"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101797" g_stop="101313" g_length="485"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="484" r_length="484" r_score="0.961"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101312" i_stop="101210" i_length="103">
            <donor d_prob="0.999" d_score="0.86"/>
            <acceptor a_prob="0.995" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101209" g_stop="101194" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="485" r_stop="500" r_length="16" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="-" ref_id="SGN-U590777" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>501</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U590777" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101797" e_stop="101313"/>
          <exon e_start="101209" e_stop="101194"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCGTAAGCCAGCACATCTTTTCTTGAACGAGCTAGGCATTGACTACGACGAGCAAGACAACTACGTGGTCATCAAACACGCTGCCTTGTTCACCTCAACCATCATGAGCAAGCTTTTGGCCAGGCCAAATGTGAAGCTCTTCAATGCTGTTGCAACAGAGGACCTTATCGTGAAGAACGGAAGAGTCGGTGGTGTTGTCACTAACTGGTCTTTGGTTTCCCAGAACCACGACACACAATCCTGCATGGACCCTAATGTTATGGAGGCTAAGATTGTGGTCAGCTCTTGTGGCCACGACGGCCCCATGGGCGCCACCGGTGTTAAGAGGCTCAGGAGCATTGGCATGATCAACAGTGTCCCTGGAATGAAAGCTTTGGACATGAACGCTGCTGAGGACGCGATTGTTAGACTTACCAGAGAGGTCGTACCTGGTATGATTGTCACAGGAATGGAAGTTGCTGAAATTGATGGAGCACCACGAATGGTTAGTATGAAATACTTGAACTCCTATATTGTATAAACTCATAATTAGAAGTTAGAAAAGCAACAAACAATTCAACTAATTGGAGATGTTATACATTGTACAGGGTCCAACTTTTGGAG</genome_strand>
        <mrna_strand>CCCGTAA-AGAGCACATCTTTTCTTGAACGAGCTAGGCATTGACCTTTACGAGCAAGACAACTACGTGGTCATCAAACACGCTGCCTTGTTCACCTCAACCATCATGAGCAAGCTTTTGGCCAGGCCAAATGTGAAGCTCTTCAATGCTGTTGCAACAGAGGACCTTATCGTGAAGAACGGAAGAGTCGGTGGTGTTGTCACTAACTGGTCTTTGGTTTCCCAGAACCACGACACACAATCCTGCATGGACCCTAATGTTATGGAGGCTAAGATTGTGGTCAGCTCTTGTGGCCACGACGGCCCCATGGGCGCCACCGGTGTTAAAAGGCTCAGGAGCATTGGCATGATCAACAGTGTCCCTGGAATGAAAGCTTTGGACATGAACGCTGCTGAGGACGCGATTGTTAGACTTGCCATAGAGGTCGTACCTGGTATAAGTGTCACAGGAATGGAAGATGCTGAAGGTGATGGAGCACGACTAATG.......................................................................................................GGTCCAACTTTTGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U592837" ref_strand="+" ref_description="SGN-U592837 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|30013665|gb|AAP03875.1| (e_value=1e-129) putative chloroplast thiazole biosynthetic protein [Nicotiana tabacum]; (*ATH) AT5G54770.1 (e_value=9e-104) | Symbol: None | thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4), identical to SP:Q38814 Thiazole biosynthetic enzyme, chloroplast precursor (ARA6) {Arabidopsis thaliana} | chr5:22263821-22265558 FORWARD | Aliases: MBG8.3, MBG8_3; (*SWP) sp|O23787|THI4_CITSI (e_value=5e-115) Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1; ">
      <seq>gcttctccgccctaaatcccagttctcaattcttctccatcaatggcttccaccttagcttcctctgttatttccaagactaatttcattgacacacacaaatcatccttctatggcgttccaatttcatcacaaactcgattgaaaatcgttaaatcgactccacaaaacatgtctgtttccatgtctgctgatgcttctcctccttacgatctcggaagtttcagttttaatccgattaaggaatcgattgttgctcgcgaaatgactcggaggtatatgacggatatgattacttatgctgatactgatgttgtcattgttggtgctggatctgctggtttatcttgtgcttatgaactcagcaagaaccctaatgttcaggtggctattcttgagcaatctgtgagccctggtggaggtgcttggctaggtggacaactcttctctgctatggttgtgcgtaagccagcacatcttttcttgaacgagctaggcattgactacgacgagcaagacaactacgtggtcatcaaacacgctgccttgttcacctcaaccatcatgagcaagcttttggccaggccaaatgtgaagctcttcaatgctgttgcaacagaggaccttatcgtgaagaacggaagagtcggtggtgttgtcactaactggtctttggtttcccagaaccacgacacacaatcctgcatgggcgccaccggtgttaagaggctcangagcattggcatgatcaacagtgtccctggaatgaaagctttggacatgaacgctgctgaggacgcgattgttagacttaccagagaggtcgtacctggtatgattgtcacaggaatggaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="-" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="103045" stop="101042"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102746" g_stop="102363" g_length="384"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="384" r_length="384" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102362" i_stop="101874" i_length="489">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101873" g_stop="101553" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="385" r_stop="705" r_length="321" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101552" i_stop="101493" i_length="60">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101492" g_stop="101342" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="706" r_stop="856" r_length="151" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="-" ref_id="SGN-U592837" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>856</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U592837" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102746" e_stop="102363"/>
          <exon e_start="101873" e_stop="101553"/>
          <exon e_start="101492" e_stop="101342"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTCTCCGCCCTAAATCCCAGTTCTCAATTCTTCTCCATCAATGGCTTCCACCTTAGCTTCCTCTGTTATTTCCAAGACTAATTTCATTGACACACACAAATCATCCTTCTATGGCGTTCCAATTTCATCACAAACTCGATTGAAAATCGTTAAATCGACTCCACAAAACATGTCTGTTTCCATGTCTGCTGATGCTTCTCCTCCTTACGATCTCGGAAGTTTCAGTTTTAATCCGATTAAGGAATCGATTGTTGCTCGCGAAATGACTCGGAGGTATATGACGGATATGATTACTTATGCTGATACTGATGTTGTCATTGTTGGTGCTGGATCTGCTGGTTTATCTTGTGCTTATGAACTCAGCAAGAACCCTAATGTTCAGGTATAACTTCTTTTTTTTTTTTAAATTATTAATACCGAGTTCTTATAGCGTTTTTGAATTAACATACAATAAAAATTGGGTTTATCGTTGATACTAGACTTTTATCTGCAATTCGAATTCGATCTAGATTTGATATATGATAAATCAAGGCTCAGGTGACTTGTTCTGGCCTCGATTGTATCCCTCTCTTGCAAATTCACGTGATACTGATTGACTTGACATCACGAATTTTGAATTTTATCGGCTCAAAAGAAAACACAGGTTTCCTGTTAAAAGTATTTTACAACTTTACTTTTACTCATAAATCATGTGATACTTTTGTCCTTAGCCTAATTTGCTAGTATTAATTTGAGTGGGGCAATTCACACGTAACACACCATTCGCGATCACAATGAACTCATTTGATGTTCTGATAGCTATAATTTTGGTAGATTACAATATCTATGTTCTTCAATTTGTTGTTTATGTGAATTTACTTTATATGTATAGGTGGCTATTCTTGAGCAATCTGTGAGCCCTGGTGGAGGTGCTTGGCTAGGTGGACAACTCTTCTCTGCTATGGTTGTGCGTAAGCCAGCACATCTTTTCTTGAACGAGCTAGGCATTGACTACGACGAGCAAGACAACTACGTGGTCATCAAACACGCTGCCTTGTTCACCTCAACCATCATGAGCAAGCTTTTGGCCAGGCCAAATGTGAAGCTCTTCAATGCTGTTGCAACAGAGGACCTTATCGTGAAGAACGGAAGAGTCGGTGGTGTTGTCACTAACTGGTCTTTGGTTTCCCAGAACCACGACACACAATCCTGCATGGACCCTAATGTTATGGAGGCTAAGATTGTGGTCAGCTCTTGTGGCCACGACGGCCCCATGGGCGCCACCGGTGTTAAGAGGCTCAGGAGCATTGGCATGATCAACAGTGTCCCTGGAATGAAAGCTTTGGACATGAACGCTGCTGAGGACGCGATTGTTAGACTTACCAGAGAGGTCGTACCTGGTATGATTGTCACAGGAATGGAAG</genome_strand>
        <mrna_strand>GCTTCTCCGCCCTAAATCCCAGTTCTCAATTCTTCTCCATCAATGGCTTCCACCTTAGCTTCCTCTGTTATTTCCAAGACTAATTTCATTGACACACACAAATCATCCTTCTATGGCGTTCCAATTTCATCACAAACTCGATTGAAAATCGTTAAATCGACTCCACAAAACATGTCTGTTTCCATGTCTGCTGATGCTTCTCCTCCTTACGATCTCGGAAGTTTCAGTTTTAATCCGATTAAGGAATCGATTGTTGCTCGCGAAATGACTCGGAGGTATATGACGGATATGATTACTTATGCTGATACTGATGTTGTCATTGTTGGTGCTGGATCTGCTGGTTTATCTTGTGCTTATGAACTCAGCAAGAACCCTAATGTTCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCTATTCTTGAGCAATCTGTGAGCCCTGGTGGAGGTGCTTGGCTAGGTGGACAACTCTTCTCTGCTATGGTTGTGCGTAAGCCAGCACATCTTTTCTTGAACGAGCTAGGCATTGACTACGACGAGCAAGACAACTACGTGGTCATCAAACACGCTGCCTTGTTCACCTCAACCATCATGAGCAAGCTTTTGGCCAGGCCAAATGTGAAGCTCTTCAATGCTGTTGCAACAGAGGACCTTATCGTGAAGAACGGAAGAGTCGGTGGTGTTGTCACTAACTGGTCTTTGGTTTCCCAGAACCACGACACACAATCCTGC............................................................ATGGGCGCCACCGGTGTTAAGAGGCTCANGAGCATTGGCATGATCAACAGTGTCCCTGGAATGAAAGCTTTGGACATGAACGCTGCTGAGGACGCGATTGTTAGACTTACCAGAGAGGTCGTACCTGGTATGATTGTCACAGGAATGGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U590752" ref_strand="+" ref_description="SGN-U590752 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|30013665|gb|AAP03875.1| (e_value=7e-95) putative chloroplast thiazole biosynthetic protein [Nicotiana tabacum]; (*ATH) AT5G54770.1 (e_value=1e-69) | Symbol: None | thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4), identical to SP:Q38814 Thiazole biosynthetic enzyme, chloroplast precursor (ARA6) {Arabidopsis thaliana} | chr5:22263821-22265558 FORWARD | Aliases: MBG8.3, MBG8_3; (*SWP) sp|O23787|THI4_CITSI (e_value=6e-81) Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1; ">
      <seq>ggcacgaggctccgccctaaatcccagttctcaattcttctccatcaatggcttccaccttagcttcctctgttatttccaagactaatttcattgacacacacaaatcatccttctatggcgttccaatttcatcacaaactcgattgaaaatcgttaaatcgactccacaaaacatgtctgtttccatgtctgctgatgcttctcctccttacgatctcggaagtttcagttttaatccgattaaggaatcgattgttgctcgcgaaatgactcggaggtatatgacggatatgattacttatgctgatactgatgttgtcattgttggtgctggatctgctggtttatcttgtgcttatgaactcagcaagaacccttggctaggtggacaactcttctctgctatggttgtgcgtaagccagcacatcttttcttgaacgagctaggcattgactacgacgagcaagacaactacgtggtcatcaaacacgctgccttgttcacctcaaccatcatgagcaagcttttggccaggccaaatgtgaagctcttcaatgctgttgcaacagaggaccttatcgtgaagaacggaagagtcggtggtgttagcactaactggtctttggtgtcccagaaccacgacacacaatcctgcatggac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="-" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="103042" stop="101247"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102751" g_stop="102369" g_length="383"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="381" r_length="381" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102368" i_stop="101831" i_length="538">
            <donor d_prob="0.906" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101830" g_stop="101547" g_length="284"/>
          <reference_exon_boundary r_type="cDNA" r_start="382" r_stop="665" r_length="284" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="-" ref_id="SGN-U590752" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>667</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U590752" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102751" e_stop="102369"/>
          <exon e_start="101830" e_stop="101547"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACAATCTTCTCCGCCCTAAATCCCAGTTCTCAATTCTTCTCCATCAATGGCTTCCACCTTAGCTTCCTCTGTTATTTCCAAGACTAATTTCATTGACACACACAAATCATCCTTCTATGGCGTTCCAATTTCATCACAAACTCGATTGAAAATCGTTAAATCGACTCCACAAAACATGTCTGTTTCCATGTCTGCTGATGCTTCTCCTCCTTACGATCTCGGAAGTTTCAGTTTTAATCCGATTAAGGAATCGATTGTTGCTCGCGAAATGACTCGGAGGTATATGACGGATATGATTACTTATGCTGATACTGATGTTGTCATTGTTGGTGCTGGATCTGCTGGTTTATCTTGTGCTTATGAACTCAGCAAGAACCCTAATGTTCAGGTATAACTTCTTTTTTTTTTTTAAATTATTAATACCGAGTTCTTATAGCGTTTTTGAATTAACATACAATAAAAATTGGGTTTATCGTTGATACTAGACTTTTATCTGCAATTCGAATTCGATCTAGATTTGATATATGATAAATCAAGGCTCAGGTGACTTGTTCTGGCCTCGATTGTATCCCTCTCTTGCAAATTCACGTGATACTGATTGACTTGACATCACGAATTTTGAATTTTATCGGCTCAAAAGAAAACACAGGTTTCCTGTTAAAAGTATTTTACAACTTTACTTTTACTCATAAATCATGTGATACTTTTGTCCTTAGCCTAATTTGCTAGTATTAATTTGAGTGGGGCAATTCACACGTAACACACCATTCGCGATCACAATGAACTCATTTGATGTTCTGATAGCTATAATTTTGGTAGATTACAATATCTATGTTCTTCAATTTGTTGTTTATGTGAATTTACTTTATATGTATAGGTGGCTATTCTTGAGCAATCTGTGAGCCCTGGTGGAGGTGCTTGGCTAGGTGGACAACTCTTCTCTGCTATGGTTGTGCGTAAGCCAGCACATCTTTTCTTGAACGAGCTAGGCATTGACTACGACGAGCAAGACAACTACGTGGTCATCAAACACGCTGCCTTGTTCACCTCAACCATCATGAGCAAGCTTTTGGCCAGGCCAAATGTGAAGCTCTTCAATGCTGTTGCAACAGAGGACCTTATCGTGAAGAACGGAAGAGTCGGTGGTGTTGTCACTAACTGGTCTTTGGTTTCCCAGAACCACGACACACAATCCTGCATGGAC</genome_strand>
        <mrna_strand>GGCACGAGGCTCCGCCCTAAATCCCAGTTCTCAATTCTTCTCCATCAATGGCTTCCACCTTAGCTTCCTCTGTTATTTCCAAGACTAATTTCATTGACACACACAAATCATCCTTCTATGGCGTTCCAATTTCATCACAAACTCGATTGAAAATCGTTAAATCGACTCCACAAAACATGTCTGTTTCCATGTCTGCTGATGCTTCTCCTCCTTACGATCTCGGAAGTTTCAGTTTTAATCCGATTAAGGAATCGATTGTTGCTCGCGAAATGACTCGGAGGTATATGACGGATATGATTACTTATGCTGATACTGATGTTGTCATTGTTGGTGCTGGATCTGCTGGTTTATCTTGTGCTTATGAACTCAGCAAGAACCCT--T..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTAGGTGGACAACTCTTCTCTGCTATGGTTGTGCGTAAGCCAGCACATCTTTTCTTGAACGAGCTAGGCATTGACTACGACGAGCAAGACAACTACGTGGTCATCAAACACGCTGCCTTGTTCACCTCAACCATCATGAGCAAGCTTTTGGCCAGGCCAAATGTGAAGCTCTTCAATGCTGTTGCAACAGAGGACCTTATCGTGAAGAACGGAAGAGTCGGTGGTGTTAGCACTAACTGGTCTTTGGTGTCCCAGAACCACGACACACAATCCTGCATGGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U590421" ref_strand="+" ref_description="SGN-U590421 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|30013665|gb|AAP03875.1| (e_value=1e-78) putative chloroplast thiazole biosynthetic protein [Nicotiana tabacum]; (*ATH) AT5G54770.1 (e_value=8e-62) | Symbol: None | thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4), identical to SP:Q38814 Thiazole biosynthetic enzyme, chloroplast precursor (ARA6) {Arabidopsis thaliana} | chr5:22263821-22265558 FORWARD | Aliases: MBG8.3, MBG8_3; (*SWP) sp|O23787|THI4_CITSI (e_value=1e-67) Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1; ">
      <seq>tcaattcttagacatcaatggctgccaccttagctgactgtgctatttccaagactaatgatattgacacacacaaatcatccttctatggcgctccaatttcatcacacactcaaccgagaatcttttaatcgactgcacaaaacatgtctgcttccatgtctgctgatgctcctcctccttacgatctcggaagtaccagttttaatccgattaaggaatcgattgttgctcgcgaaatgactcggaggtatatgacggatatgattacttatgctgatactgatgttgtcattggtggtgctggatctgctggattatcttgcgcttatgaactcagcaagaaccctaatgttcatgtggctattcttgagcaatctgtgagccctgctggaggtgcttggctaggtggacaactcttctctgctatggttgcgcgtaagccagcacatcttttcttgaacgagctaggcattgactacgacgagcaagacaactacgtggtcatcaaacacgctgccttgttcacctcaaccatcatgagcaagcttttggccaggccaaatgtgaagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="-" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="103009" stop="101359"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102721" g_stop="102363" g_length="359"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="359" r_length="359" r_score="0.922"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102362" i_stop="101874" i_length="489">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101873" g_stop="101659" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="360" r_stop="574" r_length="215" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="-" ref_id="SGN-U590421" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U590421" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102721" e_stop="102363"/>
          <exon e_start="101873" e_stop="101659"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATTCTTCTCCATCAATGGCTTCCACCTTAGCTTCCTCTGTTATTTCCAAGACTAATTTCATTGACACACACAAATCATCCTTCTATGGCGTTCCAATTTCATCACAAACTCGATTGAAAATCGTTAAATCGACTCCACAAAACATGTCTGTTTCCATGTCTGCTGATGCTTCTCCTCCTTACGATCTCGGAAGTTTCAGTTTTAATCCGATTAAGGAATCGATTGTTGCTCGCGAAATGACTCGGAGGTATATGACGGATATGATTACTTATGCTGATACTGATGTTGTCATTGTTGGTGCTGGATCTGCTGGTTTATCTTGTGCTTATGAACTCAGCAAGAACCCTAATGTTCAGGTATAACTTCTTTTTTTTTTTTAAATTATTAATACCGAGTTCTTATAGCGTTTTTGAATTAACATACAATAAAAATTGGGTTTATCGTTGATACTAGACTTTTATCTGCAATTCGAATTCGATCTAGATTTGATATATGATAAATCAAGGCTCAGGTGACTTGTTCTGGCCTCGATTGTATCCCTCTCTTGCAAATTCACGTGATACTGATTGACTTGACATCACGAATTTTGAATTTTATCGGCTCAAAAGAAAACACAGGTTTCCTGTTAAAAGTATTTTACAACTTTACTTTTACTCATAAATCATGTGATACTTTTGTCCTTAGCCTAATTTGCTAGTATTAATTTGAGTGGGGCAATTCACACGTAACACACCATTCGCGATCACAATGAACTCATTTGATGTTCTGATAGCTATAATTTTGGTAGATTACAATATCTATGTTCTTCAATTTGTTGTTTATGTGAATTTACTTTATATGTATAGGTGGCTATTCTTGAGCAATCTGTGAGCCCTGGTGGAGGTGCTTGGCTAGGTGGACAACTCTTCTCTGCTATGGTTGTGCGTAAGCCAGCACATCTTTTCTTGAACGAGCTAGGCATTGACTACGACGAGCAAGACAACTACGTGGTCATCAAACACGCTGCCTTGTTCACCTCAACCATCATGAGCAAGCTTTTGGCCAGGCCAAATGTGAAGCT</genome_strand>
        <mrna_strand>TCAATTCTTAGACATCAATGGCTGCCACCTTAGCTGACTGTGCTATTTCCAAGACTAATGATATTGACACACACAAATCATCCTTCTATGGCGCTCCAATTTCATCACACACTCAACCGAGAATCTTTTAATCGACTGCACAAAACATGTCTGCTTCCATGTCTGCTGATGCTCCTCCTCCTTACGATCTCGGAAGTACCAGTTTTAATCCGATTAAGGAATCGATTGTTGCTCGCGAAATGACTCGGAGGTATATGACGGATATGATTACTTATGCTGATACTGATGTTGTCATTGGTGGTGCTGGATCTGCTGGATTATCTTGCGCTTATGAACTCAGCAAGAACCCTAATGTTCAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCTATTCTTGAGCAATCTGTGAGCCCTGCTGGAGGTGCTTGGCTAGGTGGACAACTCTTCTCTGCTATGGTTGCGCGTAAGCCAGCACATCTTTTCTTGAACGAGCTAGGCATTGACTACGACGAGCAAGACAACTACGTGGTCATCAAACACGCTGCCTTGTTCACCTCAACCATCATGAGCAAGCTTTTGGCCAGGCCAAATGTGAAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U590180" ref_strand="+" ref_description="SGN-U590180 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|30013665|gb|AAP03875.1| (e_value=1e-29) putative chloroplast thiazole biosynthetic protein [Nicotiana tabacum]; (*ATH) AT5G54770.1 (e_value=8e-11) | Symbol: None | thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4), identical to SP:Q38814 Thiazole biosynthetic enzyme, chloroplast precursor (ARA6) {Arabidopsis thaliana} | chr5:22263821-22265558 FORWARD | Aliases: MBG8.3, MBG8_3; (*SWP) sp|O23787|THI4_CITSI (e_value=7e-17) Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1; ">
      <seq>acgaggcacaatcttctccgccctaaaacccagttctgggttcttctgcatgaatggcttgcaccttagcttcctctgttatttgcaagactaatttcattgacacacacaaatcatgcttctatggcgttccaatttcatcacaaactcgattgagaatcggtgaatcgactccacaaaacatgtctgtttccatgtctgctgatgcttctcctccttacgatctccgaagtttcagttttaatccgattaaggaatcgattgatgctcgcgaaatgactcggaggtatatgacggatatgattacttatgctgatactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="-" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="103056" stop="102137"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102757" g_stop="102437" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="321" r_length="321" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="-" ref_id="SGN-U590180" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>321</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U590180" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102757" e_stop="102437"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAAACACAATCTTCTCCGCCCTAAATCCCAGTTCTCAATTCTTCTCCATCAATGGCTTCCACCTTAGCTTCCTCTGTTATTTCCAAGACTAATTTCATTGACACACACAAATCATCCTTCTATGGCGTTCCAATTTCATCACAAACTCGATTGAAAATCGTTAAATCGACTCCACAAAACATGTCTGTTTCCATGTCTGCTGATGCTTCTCCTCCTTACGATCTCGGAAGTTTCAGTTTTAATCCGATTAAGGAATCGATTGTTGCTCGCGAAATGACTCGGAGGTATATGACGGATATGATTACTTATGCTGATACTG</genome_strand>
        <mrna_strand>ACGAGGCACAATCTTCTCCGCCCTAAAACCCAGTTCTGGGTTCTTCTGCATGAATGGCTTGCACCTTAGCTTCCTCTGTTATTTGCAAGACTAATTTCATTGACACACACAAATCATGCTTCTATGGCGTTCCAATTTCATCACAAACTCGATTGAGAATCGGTGAATCGACTCCACAAAACATGTCTGTTTCCATGTCTGCTGATGCTTCTCCTCCTTACGATCTCCGAAGTTTCAGTTTTAATCCGATTAAGGAATCGATTGATGCTCGCGAAATGACTCGGAGGTATATGACGGATATGATTACTTATGCTGATACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U589391" ref_strand="+" ref_description="SGN-U589391 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|218694563|ref|YP_002402230.1| (e_value=1e-106) transposase,; ">
      <seq>atcctgcacagcgctaatacatcgcctcatagtttccccaatatctacccatgtgtgaatatattttgagtaagcagggttgcagccacgaatgagtcttcccttgttattgtgtagccagaatgccgcaaaacttccatgcctaatccaactgttgagagtacgtttcaatttctgactgtgttagcctggaaatgcttgtcccagccttgtttctgaccgtgaacgcgccgccagccaacatgttagttgaagacatgcagggcgattagcaacatgatatcaaaacgctctgagctgctcgttcggctatggcgtaagcctagtccgtatgcaggacttttcaagtctcggaaggtttcttcaatctgcattcgcttccaatagatattaacaagttgtttgggtgttcgaatttcaacaggtaagttaattgctagaatccatggctcctttgccaacgctgagtagattttaggtgacgggtggtgacaatgagtccgtgtcgagcgctgattttttcggcctttacagcgagatttatacaataaaatttggcatgagattggattgcttttagtcagcctcttatagcctaaagtctttgagtgactaaatgacatatcatgtaagttgctgataggtttccagttttccgctcctaggtctgcatattgtacttttcctcctactcgactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="+" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="110545" stop="111832"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="110857" g_stop="111532" g_length="676"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="699" r_length="679" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="+" ref_id="SGN-U589391" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>676</cumulative_length_of_scored_exons>
        <coverage percentage="0.967" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U589391" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="110857" e_stop="111532"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCCCTCATAATTTCCCCAAAGCGTAACCATGTGTGAATAAATTTTGAGCTAGTAGGGTTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCAGAATGCCGCAAAACTTCCATGCCTAAGCGAACTGTTGAGAGTACGTTTCGATTTCTGACTGTGTTAGCCTGGAAGTGCTTGTCCCAACCTTGTTTCTGAGCATGAACGC-CCGCAAGCCAACATGTTAGTTGAAG-CAT-CAGGGCGATTAGCAGCATGATATCAAAACGCTCTGAGCTGCTCGTTCGGCTATGGCGTAGGCCTAGTCCGTAGGCAGGACTTTTCAAGTCTCGGAAGGTTTCTTCAATCTGCATTCGCTTCGAATAGATATTAACAAGTTGTTTGGGTGTTCGAATTTCAACAGGTAAGTTAGTTGCTAGAATCCATGGCTCCTTTGCCGACGCTGAGTAGATTTTAGGTGACGGGTGGTGACAATGAGTCCGTGTCGAGCGCTGATTTTTTCGGCCTTTAGAGCGAGATTTATACAATAGAATTTGGCATGAGATTGGATTGCTTTTAGTCAGCCTCTTATAGCCTAAAGTCTTTGAGTGACTAGATGACATATCATGTAAGTTGCTGATAGGTTTCCAGTTTTCCGCTCCTAGGTCTGCATATTGTACTTTTCCTCTTACTCGACTT</genome_strand>
        <mrna_strand>ATCGCCTCATAGTTTCCCCAATATCTACCCATGTGTGAATATATTTTGAGTAAGCAGGGTTGCAGCCACGAATGAGTCTTCCCTTGTTATTGTGTAGCCAGAATGCCGCAAAACTTCCATGCCTAATCCAACTGTTGAGAGTACGTTTCAATTTCTGACTGTGTTAGCCTGGAAATGCTTGTCCCAGCCTTGTTTCTGACCGTGAACGCGCCGCCAGCCAACATGTTAGTTGAAGACATGCAGGGCGATTAGCAACATGATATCAAAACGCTCTGAGCTGCTCGTTCGGCTATGGCGTAAGCCTAGTCCGTATGCAGGACTTTTCAAGTCTCGGAAGGTTTCTTCAATCTGCATTCGCTTCCAATAGATATTAACAAGTTGTTTGGGTGTTCGAATTTCAACAGGTAAGTTAATTGCTAGAATCCATGGCTCCTTTGCCAACGCTGAGTAGATTTTAGGTGACGGGTGGTGACAATGAGTCCGTGTCGAGCGCTGATTTTTTCGGCCTTTACAGCGAGATTTATACAATAAAATTTGGCATGAGATTGGATTGCTTTTAGTCAGCCTCTTATAGCCTAAAGTCTTTGAGTGACTAAATGACATATCATGTAAGTTGCTGATAGGTTTCCAGTTTTCCGCTCCTAGGTCTGCATATTGTACTTTTCCTCCTACTCGACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U589393" ref_strand="+" ref_description="SGN-U589393 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|151940600|gb|EDN59046.1| (e_value=9e-71) hypothetical; ">
      <seq>ggttaccactggaagcgcttgacccaaccttgttgtatgcatcatgaacgccctcttgctcatcatgttagttgaagcatcacggcgagttaggcatcgatgatatcaaaacgctctgagctgctcgttcagttaatggcgtatgccatagtccgtaggcaggacttttgaagatctcggaaggtttcttcaatctgcattcgcctctgaatagatattaacaagttgtttgggtgttcgaatttcaacaggtaagttagttgctagaacccatggctcctttgccgacgctgagtagattttaggtgacgggtggtgacaatgagtccgtgtcgagcgctgattttttcggcctttagagcgagatttatacaatagaatttggcatgagattggattgcttttagtcagcctcttatagcctaaagtctttgagtgactagatgacatatcatgtaagttgctgataggtttccagttttccgctcctaggtctgcatattgtacttttcctcttactcgacttaaccagtaccaacccagcttctcaacgggattataccatggcactttaaagccagcatcactga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="+" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="110719" stop="111896"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111024" g_stop="111596" g_length="573"/>
          <reference_exon_boundary r_type="cDNA" r_start="8" r_stop="590" r_length="583" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="+" ref_id="SGN-U589393" ref_strand="+">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>573</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U589393" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111024" e_stop="111596"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTGGAAGTGCTTGTCCCAACCTTGTT-TCTG-AGCATGAACGCCCGCAAGC-CAACATGTTAGTTGAAGCATCAGGGCGA-TTA-GCAGC-ATGATATCAAAACGCTCTGAGCTGCTCGTTCGGCT-ATGGCGTAGGCC-TAGTCCGTAGGCAGGACTTTTCAAG-TCTCGGAAGGTTTCTTCAATCTGCATTCGCTTC-GAATAGATATTAACAAGTTGTTTGGGTGTTCGAATTTCAACAGGTAAGTTAGTTGCTAGAATCCATGGCTCCTTTGCCGACGCTGAGTAGATTTTAGGTGACGGGTGGTGACAATGAGTCCGTGTCGAGCGCTGATTTTTTCGGCCTTTAGAGCGAGATTTATACAATAGAATTTGGCATGAGATTGGATTGCTTTTAGTCAGCCTCTTATAGCCTAAAGTCTTTGAGTGACTAGATGACATATCATGTAAGTTGCTGATAGGTTTCCAGTTTTCCGCTCCTAGGTCTGCATATTGTACTTTTCCTCTTACTCGACTTAACCAGTACCAACCCAGCTTCTCAACGGATTTATACCATGGCACTTTAAAGCCAGCATCACTGA</genome_strand>
        <mrna_strand>ACTGGAAGCGCTTGACCCAACCTTGTTGTATGCATCATGAACGCCCTCTTGCTCATCATGTTAGTTGAAGCATCACGGCGAGTTAGGCATCGATGATATCAAAACGCTCTGAGCTGCTCGTTCAGTTAATGGCGTATGCCATAGTCCGTAGGCAGGACTTTTGAAGATCTCGGAAGGTTTCTTCAATCTGCATTCGCCTCTGAATAGATATTAACAAGTTGTTTGGGTGTTCGAATTTCAACAGGTAAGTTAGTTGCTAGAACCCATGGCTCCTTTGCCGACGCTGAGTAGATTTTAGGTGACGGGTGGTGACAATGAGTCCGTGTCGAGCGCTGATTTTTTCGGCCTTTAGAGCGAGATTTATACAATAGAATTTGGCATGAGATTGGATTGCTTTTAGTCAGCCTCTTATAGCCTAAAGTCTTTGAGTGACTAGATGACATATCATGTAAGTTGCTGATAGGTTTCCAGTTTTCCGCTCCTAGGTCTGCATATTGTACTTTTCCTCTTACTCGACTTAACCAGTACCAACCCAGCTTCTCAACGGGATTATACCATGGCACTTTAAAGCCAGCATCACTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U604818" ref_strand="+" ref_description="SGN-U604818 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|116267070|gb|ABJ96340.1| (e_value=3e-56) transposase; ">
      <seq>ataatcagacaacacttgtgcaaaatcgatcttttaacctaatctacttttacccttctgccccgatttacacttatcaacgactcaacttcttaacgatggcttgccacgccttacttgactgaataactctcactcttaactaacttggacgtaacctgccaaccatatctatatctaaacataacatcttactaatctaccgattgttacgtaatcgtctcctccacaaagagcgactcgctgtataccgttggcatgctagctttatctgttcgggcaatacgatgcccattgtacttgttgactggtctgatatccgtgagcaaaaacggcttatggtattgcgagcttcagtcgcactacacggtcgttctgttactctttatgagaaagcgttcccgctttcagagcaatgttcaaagaaagctcatgaccaatttctagccgaccttgcgagcattctaccgagtaacaccacaccgctcattgtcagtgatgctggctttaaaagtgccatggtataaatccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="-" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="112310" stop="111259"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="112087" g_stop="111558" g_length="530"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="532" r_length="532" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="-" ref_id="SGN-U604818" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>530</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U604818" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="112087" e_stop="111558"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAATCAGACAACAAAATGTGCGAACTCGATATTTTACACGACTCT-CTTTACCAATTCTGCCCCGAATTACACTTA-AAACGACTCAACAGCTTAACGTTGGCTTGCCACGCCTTACTTGACTGTAAAACTCTCACTCTTACCGAACTTGGCCGTAACCTGCCAACCAAAGCGAGAACAAAACATAACATCAAACGAATCGACCGATTGTTAGGTAATCGTCACCTCCACAAAGAGCGACTCGCTGTATACCGTTGGCATGCTAGCTTTATCTGTTCGGGCAATACGATGCCCATTGTACTTGTTGACTGGTCTGATATCCGTGAGCAAAAACGGCTTATGGTATTGCGAGCTTCAGTCGCACTACACGGTCGTTCTGTTACTCTTTATGAGAAAGCGTTCCCGCTTTCAGAGCAATGTTCAAAGAAAGCTCATGACCAATTTCTAGCCGACCTTGCGAGCATTCTACCGAGTAACACCACACCGCTCATTGTCAGTGATGCTGGCTTT-AAAGTGCCATGGTATAAATCCG</genome_strand>
        <mrna_strand>ATAATCAGACAAC-ACTTGTGCAAAATCGATCTTTTAACCTAATCTACTTTTACCCTTCTGCCCCGATTTACACTTATCAACGACTCAACTTCTTAACGATGGCTTGCCACGCCTTACTTGACTGAATAACTCTCACTCTTAACTAACTTGGACGTAACCTGCCAACCATATCTATATCTAAACATAACATCTTACTAATCTACCGATTGTTACGTAATCGTCTCCTCCACAAAGAGCGACTCGCTGTATACCGTTGGCATGCTAGCTTTATCTGTTCGGGCAATACGATGCCCATTGTACTTGTTGACTGGTCTGATATCCGTGAGCAAAAACGGCTTATGGTATTGCGAGCTTCAGTCGCACTACACGGTCGTTCTGTTACTCTTTATGAGAAAGCGTTCCCGCTTTCAGAGCAATGTTCAAAGAAAGCTCATGACCAATTTCTAGCCGACCTTGCGAGCATTCTACCGAGTAACACCACACCGCTCATTGTCAGTGATGCTGGCTTTAAAAGTGCCATGGTATAAATCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U604614" ref_strand="+" ref_description="SGN-U604614 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|113205155|gb|ABI34274.1| (e_value=3e-45) IS10; ">
      <seq>aatcgtaagattaaggtaaatgacatacttgtcagatgatccaatggatacaccacaaatctataatcagacaacaaatatgtgcgaactcgatattttacacgactctcgttaccgattctgccccgaattacacttaagacgactcaacagcttaacgttggcttgccacgccttacttgactgtaaaactctcactcttaccgaacttggccgtaacctgccaaccaaagcgagaacaaaacataacatcaaacgaatcgaccgattgttaggtaatcgtcacctccacaaagagcgactcgctgtataccgttggcatgctagctttaactgttccggcacaaagacgcccactgtacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="-" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="112426" stop="111487"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="112149" g_stop="111787" g_length="363"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="364" r_length="364" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="-" ref_id="SGN-U604614" ref_strand="+">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>363</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U604614" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="112149" e_stop="111787"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCATTAAGTTAAGGTAGAT-ACACATCTTGTCATATGATCAAATGGTTTCGCCAAAAATCAATAATCAGACAACAAA-ATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCCTTACTTGACTGTAAAACTCTCACTCTTACCGAACTTGGCCGTAACCTGCCAACCAAAGCGAGAACAAAACATAACATCAAACGAATCGACCGATTGTTAGGTAATCGTCACCTCCACAAAGAGCGACTCGCTGTATACCGTTGGCATGCTAGCTTTATCTGTTCGGGCAATACGATGCCCATTGTACTT</genome_strand>
        <mrna_strand>AATCGTAAGATTAAGGTAAATGACATA-CTTGTCAGATGATCCAATGGATACACCACAAATCTATAATCAGACAACAAATATGTGCGAACTCGATATTTTACACGACTCTCGTTACCGATTCTGCCCCGAATTACACTTAAGACGACTCAACAGCTTAACGTTGGCTTGCCACGCCTTACTTGACTGTAAAACTCTCACTCTTACCGAACTTGGCCGTAACCTGCCAACCAAAGCGAGAACAAAACATAACATCAAACGAATCGACCGATTGTTAGGTAATCGTCACCTCCACAAAGAGCGACTCGCTGTATACCGTTGGCATGCTAGCTTTAACTGTTCCGGCACAAAGACGCCCACTGTACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U600659" ref_strand="+" ref_description="SGN-U600659 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|209947532|ref|YP_002291029.1| (e_value=1e-21) hypothetical; ">
      <seq>ctgatgaatcccctaatgatttttatcaaaatcattaaattaaggtatatacacatcttgtcatatgatcacatggtttcgccaaaaatcaataatcatacaaccaaatgtgctaactccatattttacacgactctctttaccaattctgccccctattacacttaaatcgactcaacagcttatcgttggcttgccacgccttacttgactgtaaaactct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="-" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="112478" stop="111656"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="112178" g_stop="111956" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="223" r_length="223" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="-" ref_id="SGN-U600659" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>223</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U600659" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="112178" e_stop="111956"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGATGAATCCCCTAATGATTTTTATCAAAATCATTAAGTTAAGGTAGATACACATCTTGTCATATGATCAAATGGTTTCGCCAAAAATCAATAATCAGACAACAAAATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCCTTACTTGACTGTAAAACTCT</genome_strand>
        <mrna_strand>CTGATGAATCCCCTAATGATTTTTATCAAAATCATTAAATTAAGGTATATACACATCTTGTCATATGATCACATGGTTTCGCCAAAAATCAATAATCATACAACCAAATGTGCTAACTCCATATTTTACACGACTCTCTTTACCAATTCTGCCCCCTATTACACTTAAATCGACTCAACAGCTTATCGTTGGCTTGCCACGCCTTACTTGACTGTAAAACTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U564130" ref_strand="+" ref_description="SGN-U564130 Tomato 200607#2 [6 ESTs aligned] (*GB) gi|157337964|emb|CAO39008.1| (e_value=4e-88) unnamed; (*ATH) AT3G20560.1 (e_value=4e-79) | Symbol: ATPDIL5-3 | Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. | chr3:7182041-7186573 FORWARD | Aliases: K10D20.10, ATPDIL5-3, PDI-LIKE 5-3; (*SWP) sp|Q969X5|ERGI1_HUMAN (e_value=4e-19) Endoplasmic reticulum-Golgi intermediate compartment protein 1 OS=Homo sapiens GN=ERGIC1; ">
      <seq>gatcacgagtcatactatggggatcgtgatacagatagcttagtcaaggtgagaacaattgggcttgaataaggaaaagaagaaaacattaaaagaggaaaacttaaggatggttaagattgagaaaaaaaacagagctgatccacttcatgcttcctttttgcaatcacagggcacagctgtttgtactgatttttcacaatgcaatgtggcagttgtgttgcattagatgttattgtatcatttgtatcatgccattgagatgactggtatatttattcttctgcagatgatggaagatttggttgcacctatcaagctggattctcaaacgattacttcagataattcgtctaccaagctggaaactggcttgaaaagacctgctcctgtaactggaggatgcagaatagaaggttttgtacgtgttaagaaggttcctggcaaccttgtcatatcagctcgttcagctgctcattcatttgatgcttctcagatgaacatgtcacatgtaatttctagcttttcatttggtaagacaattactccgaaggttatgagtgatatcaaaatactgctaccacatttgggtcgaagccatgataggttgaatggtaactcatatgttactaatccaagagattccacagaaaatgttactattgaacattttcttcaagtggtgaaaacagaggtgatgacaagatcgtacaaattagttgaggagtacgagtacacggcacatagtagtttggttcatagtcttcacataccagtagcgaaatttcattatgagccatcaccaatgcaggtcttgattacagaaaatcccaagtccttttcacattttcttaccaatgtctgcgctattattggtggtgttttcacggttgccggcatactggactcgattctgcacaacacaatgagaatggtgaaaaaaagttgagctaggaaagaatttttgaggagagtagtctgatgatagaaatttagtttgtgcactataattatacgctttaaaattatactatattagatattctcttcgtttacagcaagtcttgaaaacatttttcttgcatcaagagttctggtgatctgcaccaaatatattagtaaatttctcgtgcaggcgctttaatttgtgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="+" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="115462" stop="118159"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115762" g_stop="116197" g_length="436"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="436" r_length="436" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="116198" i_stop="116427" i_length="230">
            <donor d_prob="0.849" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="116428" g_stop="116652" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="661" r_length="225" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="116653" i_stop="117151" i_length="499">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="117152" g_stop="117301" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="662" r_stop="811" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="117302" i_stop="117392" i_length="91">
            <donor d_prob="0.884" d_score="1.00"/>
            <acceptor a_prob="0.961" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="117393" g_stop="117470" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="812" r_stop="889" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="117471" i_stop="117598" i_length="128">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="117599" g_stop="117859" g_length="261"/>
          <reference_exon_boundary r_type="cDNA" r_start="890" r_stop="1151" r_length="262" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="+" ref_id="SGN-U564130" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1150</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U564130" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115762" e_stop="116197"/>
          <exon e_start="116428" e_stop="116652"/>
          <exon e_start="117152" e_stop="117301"/>
          <exon e_start="117393" e_stop="117470"/>
          <exon e_start="117599" e_stop="117859"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCACGAGTCATACTATGGGGATCGTGATACAGATAGCTTAGTCAAGGTGAGAACAATTGGGCTTGAATAAGGAAAAGAAGAAAACATTAAAAGAGGAAAACTTAAGGATGGTTAAGATTGAGAAAAAAAACAGAGCTGATCCACTTCATGCTTCCTTTTTGCAATCACAGGGCACAGCTGTTTGTACTGATTTTTCACAATGCAATGTGGCAGTTGTGTTGCATTAGATGTTATTGTATCATTTGTATCATGCCATTGAGATGACTGGTATATTTATTCTTCTGCAGATGATGGAAGATTTGGTTGCACCTATCAAGCTGGATTCTCAAACGATTACTTCAGATAATTCGTCTACCAAGCTGGAAACTGGCTTGAAAAGACCTGCTCCTGTAACTGGAGGATGCAGAATAGAAGGTTTTGTACGTGTTAAGAAGGTAAGCAAGTTATTGATGGCAGCCAGTAAAAATTAAGTGCCCCTGCAACTGCAACTCAAACTTAAAAAACACAAGGATGATGCTGGAGACGATATGAAATATGATATGTTTTAAGTTGTTTGAAATATAAACCTGGGCAGTAAGATTGTTGAAGTGCTCATGCATTGTTGTCTTGCTACTCTTAAATATTTGACAAAGTAATATATCCATTTATGTTATGTACTGTTCAGGTTCCTGGCAACCTTGTCATATCAGCTCGTTCAGCTGCTCATTCATTTGATGCTTCTCAGATGAACATGTCACATGTAATTTCTAGCTTTTCATTTGGTAAGACAATTACTCCGAAGGTTATGAGTGATATCAAAATACTGCTACCACATTTGGGTCGAAGCCATGATAGGTTGAATGGTAACTCATATGTTACTAATCCAAGAGATTCCACAGAAAATGTTACTGTAAGCTCCTACTCACCTACTATATTCTCTCTCTTTTTTTTTTGGGAGAAGTAATTGTTGAATTATGTGACCATCTCATCTCAACATTTGGGTTCCTATTTTGGTGGGTTAATGGTGATTGGTCTCTTTGTTTGGTCTTGGGAAATCCTTGCCTCTTGAGCTTGCTTTTGAGGTTGAGTTAGATCCAATATTCATTTTCTTATGAGTGATATTTTATAAATGATAAAGTAACACTAAGACAGTGCATTAAAATTGCCTAGTGTTCAAAGCACCAATCATTTATAAATTTAAATGTTATAATTTTACATTTTTGCTGCTTTTACAGACTCCGGTCTATAAAATCTTACGGAAGTATAAAGAAATCTCAATTCTCAGTCACTGTTTCATCTGCTCTCCACAAGTTTTTGGGTGCACTTCTATGATATTTTTCAGCTGGTACATTAATAAAGAGTTTCAAGGATGACCAGAAAACCTAGCTCACCTTTTATCTTTATTGCAGATTGAACATTTTCTTCAAGTGGTGAAAACAGAGGTGATGACAAGATCGTACAAATTAGTTGAGGAGTACGAGTACACGGCACATAGTAGTTTGGTTCATAGTCTTCACATACCAGTAGCGAAATTTCATTATGAGCCATCACCAATGCAGGTGTTGCATCAGTACATTTCGTGATTATGTGATATAGCTTAATACATCTTATTTTGGTTTCTTATTCTTATTATTTGTCCTTTGCTATCAGGTCTTGATTACAGAAAATCCCAAGTCCTTTTCACATTTTCTTACCAATGTCTGCGCTATTATTGGTGGTGTTTTCACGGTCAGTCTCTCCTACTTGCCTCTCCTGTTGTTTCACACCGTCATTCCCTGCTAACAACTTTCTCTGGGCTTTCATTTGTGTCATCTTTATTGAAACTTCCCTATATTCGTTCTTTTTGGGTGGCATAGGTTGCCGGCATACTGGACTCGATTCTGCACAACACAATGAGAATGGTG-AAAAAAGTTGAGCTAGGAAAGAATTTTTGAGGAGAGTAGTCTGATGATAGAAATTTAGTTTGTGCACTATAATTATACGCTTTAAAATTATACTATATTAGATATTCTCTTCGTTTACAGCAAGTCTTGAAAACATTTTTCTTGCATCAAGAGTTCTGGTGATCTGCACCAAATATATTAGTAAATTTCTCGTGCAGGCGCTTTAATTTGTGG</genome_strand>
        <mrna_strand>GATCACGAGTCATACTATGGGGATCGTGATACAGATAGCTTAGTCAAGGTGAGAACAATTGGGCTTGAATAAGGAAAAGAAGAAAACATTAAAAGAGGAAAACTTAAGGATGGTTAAGATTGAGAAAAAAAACAGAGCTGATCCACTTCATGCTTCCTTTTTGCAATCACAGGGCACAGCTGTTTGTACTGATTTTTCACAATGCAATGTGGCAGTTGTGTTGCATTAGATGTTATTGTATCATTTGTATCATGCCATTGAGATGACTGGTATATTTATTCTTCTGCAGATGATGGAAGATTTGGTTGCACCTATCAAGCTGGATTCTCAAACGATTACTTCAGATAATTCGTCTACCAAGCTGGAAACTGGCTTGAAAAGACCTGCTCCTGTAACTGGAGGATGCAGAATAGAAGGTTTTGTACGTGTTAAGAAG......................................................................................................................................................................................................................................GTTCCTGGCAACCTTGTCATATCAGCTCGTTCAGCTGCTCATTCATTTGATGCTTCTCAGATGAACATGTCACATGTAATTTCTAGCTTTTCATTTGGTAAGACAATTACTCCGAAGGTTATGAGTGATATCAAAATACTGCTACCACATTTGGGTCGAAGCCATGATAGGTTGAATGGTAACTCATATGTTACTAATCCAAGAGATTCCACAGAAAATGTTACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAACATTTTCTTCAAGTGGTGAAAACAGAGGTGATGACAAGATCGTACAAATTAGTTGAGGAGTACGAGTACACGGCACATAGTAGTTTGGTTCATAGTCTTCACATACCAGTAGCGAAATTTCATTATGAGCCATCACCAATGCAG...........................................................................................GTCTTGATTACAGAAAATCCCAAGTCCTTTTCACATTTTCTTACCAATGTCTGCGCTATTATTGGTGGTGTTTTCACG................................................................................................................................GTTGCCGGCATACTGGACTCGATTCTGCACAACACAATGAGAATGGTGAAAAAAAGTTGAGCTAGGAAAGAATTTTTGAGGAGAGTAGTCTGATGATAGAAATTTAGTTTGTGCACTATAATTATACGCTTTAAAATTATACTATATTAGATATTCTCTTCGTTTACAGCAAGTCTTGAAAACATTTTTCTTGCATCAAGAGTTCTGGTGATCTGCACCAAATATATTAGTAAATTTCTCGTGCAGGCGCTTTAATTTGTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U564300" ref_strand="+" ref_description="SGN-U564300 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|157337965|emb|CAO39009.1| (e_value=4e-40) unnamed; (*ATH) AT3G20570.1 (e_value=5e-33) | Symbol: None | plastocyanin-like domain-containing protein | chr3:7186312-7187527 REVERSE | Aliases: K10D20.11; (*SWP) sp|Q8LC95|ENL3_ARATH (e_value=4e-24) Early nodulin-like protein 3 OS=Arabidopsis thaliana GN=At5g25090; ">
      <seq>ggttttctatttcaattttcatctaacatttatttaattttattctttgtcttcattattttattttattttatttttttccccaatggctcaaataacaagttcaagatcaaatacaaaagttttttattttttgggcttgttcaatattttgttgatgttacaaaatgccaactgttatgagtttaaagttggaggctctggagattggagtgtccctatggatgccaatgctaataattacaatcaatgggctgaaaggagtagattccaaattggtgacactttatcttttagctactctgctgataaagactcagtgcttcttgtaaacaaggcagattttgacaattgcaacactgcttctcccattgagaagtacagtgatggacagagtgtggttaagtttaaccactctggtgcatacttcttcattagtggtgttcatgacaactgtgtcaagaatgaaaagttgcatcttgtagtcatggctgatagaagtcacaacaaccaaacagcttcttctcctcctccatccccatcagtagacgaagttcctccgtctccggccccgtctggggaggaggcaccatcaccaccatctgactcaggggagaccaaccaaacaccagctccctctcaagaatcatctcctccgaaaaatggtgcttcgtcgaccgttatgagctttgttggctctgctgcagctcttgttggttcatccaaactgttggggttctgataaaagagaggattgacttgtttgtatttgttttgttttgattgttttcattttttgggttttgggtttcaagattttcctactttgttctcagtgaatgtagctgagagtaaaagggggtattgatttgtattggttatatgggatgaaaaataaataaactaaatgtttgtgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="-" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="121217" stop="119196"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="120918" g_stop="120630" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="290" r_length="290" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120629" i_stop="120123" i_length="507">
            <donor d_prob="0.799" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="120122" g_stop="119496" g_length="627"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="917" r_length="627" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="-" ref_id="SGN-U564300" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>916</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U564300" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="120918" e_stop="120630"/>
          <exon e_start="120122" e_stop="119496"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTTTCTATTTCAATTTTCATCTAACATTTATTTAATTTTATTCTTTGTCTTCATTATTTTATTTTATTTTATTTT-TTCCCCAATGGCTCAAATAACAAGTTCAAGATCAAATACAAAAGTTTTTTATTTTTTGGGCTTGTTCAATATTTTGTTGATGTTACAAAATGCCAACTGTTATGAGTTTAAAGTTGGAGGCTCTGGAGATTGGAGTGTCCCTATGGATGCCAATGCTAATAATTACAATCAATGGGCTGAAAGGAGTAGATTCCAAATTGGTGACACTTTATGTAAGTTTTATTATATATTCATTTCGATTTTCACCTTTACATTAGTCATAAAATAAACAGTAAATCTGATCGACTATCTGTGAAAAGATCACATATTTGTTTAAGGAGTGCCTTTTATTATCGTTCTATTTTCAAAATTGATCTCTATGAGTTAGGCCCGTTTGGATTGAGTTATTTTTATTATTTTAGCTTTAAAAAAGTATTTATAAGCACTTTTTAACTTTACTCAAACACTTCAAAACTGCTTAAAAGCTATTTTAATTTAAAAGCACCTAAAATAAGTCGATCCAAATGAAAACTCACTATACTTTTAGAAGTTCCTTTTTATATACACGTCTATCTTTCATATCAAAAATATTGAGTTCGATTAAACTTGTATAGTACTAACTACTAAGGCTATATTCTCTTATTCGTTCAGAATTCACTAACTCTAGATCATGGATTCACCTCTAGACAATGTACAAGTTTGATTCTTAATTCTAATACACCTTTTGTTGGCCTTGGCAGCTTTTAGCTACTCTGCTGATAAAGACTCAGTGCTTCTTGTAAACAAGGCAGATTTTGACAATTGCAACACTGCTTCTCCCATTGAGAAGTACAGTGATGGACAGAGTGTGGTTAAGTTTAACCACTCTGGTGCATACTTCTTCATTAGTGGTGTTCATGACAACTGTGTCAAGAATGAAAAGTTGCATCTTGTAGTCATGGCTGATAGAAGTCACAACAACCAAACAGCTTCTTCTCCTCCTCCATCCCCATCAGTAGACGAAGTTCCTCCGTCTCCGGCCCCGTCTGGTGAGGAGGCACCATCACCACCATCTGACTCAGGTGAGACCAACCAAACACCAGCTCCCTCTCAAGAATCATCTCCTCCGAAGAATGGTGCTTCGTCGACCGTTATGAGCTTTGTTGGCTCTGCTGCAGCTCTTGTTGGTTCATCCATACTGTTGGGGTTCTGATAAAAGAGATGATTGACTTGTTTGTATTTGTTTTGTTTTGATTGTTTTCATTTTTTGGGTTTTGTGTTTCATGATTTTCCTACTTTGTTCTCAGTGAATGTAGCTGAGAGTAAAAGGGTGTATTGATTTGTATTGGTTATATGTGATGAAAAATAAATAAACTAAATGTTTGTGT</genome_strand>
        <mrna_strand>GGTTTTCTATTTCAATTTTCATCTAACATTTATTTAATTTTATTCTTTGTCTTCATTATTTTATTTTATTTTATTTTTTTCCCCAATGGCTCAAATAACAAGTTCAAGATCAAATACAAAAGTTTTTTATTTTTTGGGCTTGTTCAATATTTTGTTGATGTTACAAAATGCCAACTGTTATGAGTTTAAAGTTGGAGGCTCTGGAGATTGGAGTGTCCCTATGGATGCCAATGCTAATAATTACAATCAATGGGCTGAAAGGAGTAGATTCCAAATTGGTGACACTTTAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTAGCTACTCTGCTGATAAAGACTCAGTGCTTCTTGTAAACAAGGCAGATTTTGACAATTGCAACACTGCTTCTCCCATTGAGAAGTACAGTGATGGACAGAGTGTGGTTAAGTTTAACCACTCTGGTGCATACTTCTTCATTAGTGGTGTTCATGACAACTGTGTCAAGAATGAAAAGTTGCATCTTGTAGTCATGGCTGATAGAAGTCACAACAACCAAACAGCTTCTTCTCCTCCTCCATCCCCATCAGTAGACGAAGTTCCTCCGTCTCCGGCCCCGTCTGGGGAGGAGGCACCATCACCACCATCTGACTCAGGGGAGACCAACCAAACACCAGCTCCCTCTCAAGAATCATCTCCTCCGAAAAATGGTGCTTCGTCGACCGTTATGAGCTTTGTTGGCTCTGCTGCAGCTCTTGTTGGTTCATCCAAACTGTTGGGGTTCTGATAAAAGAGAGGATTGACTTGTTTGTATTTGTTTTGTTTTGATTGTTTTCATTTTTTGGGTTTTGGGTTTCAAGATTTTCCTACTTTGTTCTCAGTGAATGTAGCTGAGAGTAAAAGGGGGTATTGATTTGTATTGGTTATATGGGATGAAAAATAAATAAACTAAATGTTTGTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U567879" ref_strand="+" ref_description="SGN-U567879 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|217073580|gb|ACJ85150.1| (e_value=2e-30) unknown; (*ATH) AT5G54780.1 (e_value=2e-31)  Symbol: None | similar to RabGAP/TBC domain-containing protein [Arabidopsis thaliana] (TAIR:At4g27100.1); similar to putative GTPase activating protein [Oryza sativa (japonica cultivar-group)] (GB:XP_468334.1); contains InterPro domain RabGAP/TBC do... ; ">
      <seq>gcctcgttagctctgactgtgaaaatgtcaccgccagaatactcaaaactgtaaaacaccattcttacccaaaaaaagaaaaagaaagtttagctaagtatttggcaattaggaaaaagatcaaatttttatgttgattatggtgtgtttcttgaatttctgtcaaatgggtagctagaaaaacaagttttatgatctggggttgtctcatttctgtttttcttgttgaaaatctgatctgggttcttgagctgcagctgttgggtttccaagattgttttttttttgtttggtttgaggagttttcaagaatgtggagggaccctggagctcctgctgattctttctaccaggttcgccctgaatgtacaaatattccaaaaacaagatttagaatcaaggctgggaaaaccttaagtgcaaggaaatggcgtgctgcatttacatcagaaggttatcttgatattggcaaaacactgagtcgaatttatcgtggggggattcatccatcaattagaggtgaaatttgggaatttttattggggttgttatgatccaaagagcacatttgaagaacgagagtacatacgacagcggaggagggtccagtatgctgtactgaaagaagaatgtcacgcaatgtttcccatgattggaagtggtagttttattactgcacctgtnattactgaaaatggtgaccctatagtagatcctattactctcccagaggcacaagcagcaaaagaattatattcaggtggtcaacga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="+" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="122054" stop="125517"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="122353" g_stop="122754" g_length="402"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="401" r_length="401" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="122755" i_stop="124131" i_length="1377">
            <donor d_prob="0.975" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="124132" g_stop="124227" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="402" r_stop="497" r_length="96" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="124228" i_stop="124439" i_length="212">
            <donor d_prob="0.988" d_score="0.98"/>
            <acceptor a_prob="0.039" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="124440" g_stop="124543" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="498" r_stop="602" r_length="105" r_score="0.942"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="124544" i_stop="125048" i_length="505">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="125049" g_stop="125217" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="603" r_stop="771" r_length="169" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="+" ref_id="SGN-U567879" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>771</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U567879" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="122353" e_stop="122754"/>
          <exon e_start="124132" e_stop="124227"/>
          <exon e_start="124440" e_stop="124543"/>
          <exon e_start="125049" e_stop="125217"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTCGTTAGCTCTGACTGTGAAATTGTCACCACCAGAATACTCAAAACTGTAAAACACCATTCTTACCCAAAAAAAGAAAAAGAAAGTTTAGCTAAGTATTTGGCAATTAGGAAAAAGATCAAATTTTTATGTTGATTATAATGTGTTTCTTGAATTTCTGTCAAATGGGTAGCTAGAAAAACAAGTTTTATGATCTGGGGTTGTCTCATTTTTGTTTTTCTTGTTGAAAATCTGATCTGGGTTCTTGAGCTGCAGCTGTTGGGTTTCCAAGATTGTTTTTTTTTTTGTTTGGTTTGAGGAGTTTTCAAGAATGTGGAGGGACCCTGGAGCTCCTGCTGATTCTTTCTACCAGGTTCGCCCTGAATGTACAAATGTTCCAAAAACAAGATTTAGAATCAAGGTTAGTTTTTTTAGTTTTTGATGCTAGGGGCATTGTATTACATTTGTGTTTTTTTGAATAGATTTTTGGTATGAGCTTGTATGAGAAGTTGGGATTCTAACTTGTTTGGGATTGAGGCGTAGTAGTAGTTGTTGTTGTTGTATGTTAGAAGCTTTTGTAGGACAACTAGTAATGTGCATGAATGAGGTAATCTATTGTGTTATGTTGTGGGATGTATTGAGATGATTGAAAAGATCATGTGTTTTGTTGAGATGGAAGATGTTTATCTGGCAGACCTTAGACTTGGGTTCTAGATGGGGATCATCAACTGCAATTAGCATCAGCCAAATCAAATGATCTATGGCTGCCAATGTCTCTCGTGGTAAAAAGAATGTAGAACCAAATATCTATTGGAAGTAATAAAGACTTCACAGTAGAACATAAATGTTTTGCTTACAGTTTGCTCTTCAGAATTTGATAGTGGCATAAAGCCTTATTGTTTGAAACATTTTTCGGTTTGCATCCCCATTTTAGTAGTTGGGACTGGTACTTGGTCCAAGATTACCTGGTTTTAAGTTGGGGAAAGGGGAATGTTCACCTGAATTTCCTTTTACATGTTTCATAAGCTGTACTTGCAGATTAAACTACTCTTCCCGTTCCAATTTAAGTGTCTTAGTTTGATTTAGTCTTAAATTAAAGATTTGTATAGTCCTTAAAAAAATCATGTGGTTTTGAACTTGTCGTGTAGAATATTGGAATTGAAAAACTTGCTAATATAGAAAGAGACTCTTTTTGGAACAAAACCAAGTGGGAAGTAAGACACTCAAATTGGGATAGAGGGAGTATATGTTTCCTGTTCCATCAATCTGTACAAACAATCTTTTACTCTTAGACTCTTCTCACTCTTTAACCTTGCCAATCAGTGAATTCAATTGGATGACATTTCCGGGTTTTAAACTTATGAGGTTGGCTGCTGTTGTGCAACATATAATGAGTGAATCTGCATGATGATTAGCATATATCATTTGATCCCTATTTGTTCCATAACGCGTGTGGCACATGTGGTGTGAACTAGTTTGCATTATATCTTAAGTCGGAACTGTGGGTATTTAGTGTAGAGTATATGTAAATCTTCAGTTGTGTCACATTAGTTGTCAGTAAGATGGATGAGCATTTCAAAAGGTCCCTCTTTTTTCATGAAAAGAACTGGATTTTTCGTTTATCTGCTTACCATCTCAAATAAGAATTCGAAAAGACTCTCTACATTGTCAATCATATAATGACGTTCAGAAGTAGTTCTCACATTTCTCTTGAATAAGTTGAACTCCTTACTAGATATCCACCATCTCCTGTATTTGTGTTGCCGGATATGTCTTATCTATTGATTTACTTATTCAGGCTGGGAAAACCTTAAGTGCAAGGAAATGGCGTGCTGCATTTACATCAGAAGGTTATCTTGACATTGGCAAAACACTGAGTCGAATTTATCGTGGGGTAAGTTTGACTTATTGATGTCAATGTTTTTGCAGGATTACATGATGTATGATCCTGAAGCTTCTATTCTACAGTTTTATTATACTAGCTGATTTGTTTGAACTCTTTTCAGTTTTGTTTGACTAATTCCATGAATATGCATTACTCATAAATTCCTGAAAAGATGATTAGCATAGAAGTCTAGTAACCATCAAATTTCTATGACATTATAGGGGATTCATCCATCAATTAGAGGTGAAGTTTGGGAATTTTTATT-GGGTTGTTATGATCCAAAGAGCACATTTGAAGAACGAGAGCAGATACGACAACGGAGGAGGTAATTTACATTCTTTATTGCTAAGTTGGAAAACATATATAGCACTTATTTTCCCATTTTACATCACTTAATAATTGCAAGTTCATCACTTGATTTCAATAGGTAGCATGGTATTTTATTTATACTGTTGGAGGTGACCTGAAAATCGTTTTCAGCTGAAAACGGCTCCATATAGGATCATCAGGTGACAGTGTTAAAAAACCAGTAGCTCATCAAAATGGTTTAAACTCTGTACTTAGACGTTACCAAATTTGACAAATTCATTACAGTTAGGAGATTGTTATTCATCATAAGAATACACATTGCTACCTCATCACTACTAATGGCAAGTGAAATGTTTGGGAATGAGGCTTAGTTGATCATGGTTCATCGATATAATTTGGCTCAAATTATCTTCACATGTAAAATGAGGATAATTTACCGTTCCTGAGTATAAACTAAACACTGATCCATAAGCAGTTTCCATACCTTATTGTTGACCTGGATTTCTGTTGTGTTCGCTCAGGGTCCAGTATGCTGTACTGAAAGAAGAATGTCACGCAATGTTTCCCATGATTGGAAGTGGTAGTTTTATTACTGCACCTGTAATTACTGAAAATGGTGACCCTATAGTAGATCCTATTACTCTCCAAGAGGCACAAGCAGCAAAAGAATTATATTCAGGTGGTCAACAA</genome_strand>
        <mrna_strand>GCCTCGTTAGCTCTGACTGTGAAAATGTCACCGCCAGAATACTCAAAACTGTAAAACACCATTCTTACCCAAAAAAAGAAAAAGAAAGTTTAGCTAAGTATTTGGCAATTAGGAAAAAGATCAAATTTTTATGTTGATTATGGTGTGTTTCTTGAATTTCTGTCAAATGGGTAGCTAGAAAAACAAGTTTTATGATCTGGGGTTGTCTCATTTCTGTTTTTCTTGTTGAAAATCTGATCTGGGTTCTTGAGCTGCAGCTGTTGGGTTTCCAAGATTG-TTTTTTTTTTGTTTGGTTTGAGGAGTTTTCAAGAATGTGGAGGGACCCTGGAGCTCCTGCTGATTCTTTCTACCAGGTTCGCCCTGAATGTACAAATATTCCAAAAACAAGATTTAGAATCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGGAAAACCTTAAGTGCAAGGAAATGGCGTGCTGCATTTACATCAGAAGGTTATCTTGATATTGGCAAAACACTGAGTCGAATTTATCGTGGG....................................................................................................................................................................................................................GGGATTCATCCATCAATTAGAGGTGAAATTTGGGAATTTTTATTGGGGTTGTTATGATCCAAAGAGCACATTTGAAGAACGAGAGTACATACGACAGCGGAGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCCAGTATGCTGTACTGAAAGAAGAATGTCACGCAATGTTTCCCATGATTGGAAGTGGTAGTTTTATTACTGCACCTGTNATTACTGAAAATGGTGACCCTATAGTAGATCCTATTACTCTCCCAGAGGCACAAGCAGCAAAAGAATTATATTCAGGTGGTCAACGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U602828" ref_strand="-" ref_description="SGN-U602828 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157337967|emb|CAO39011.1| (e_value=1e-75) unnamed; (*ATH) AT5G54780.1 (e_value=4e-74)  Symbol: None | similar to RabGAP/TBC domain-containing protein [Arabidopsis thaliana] (TAIR:At4g27100.1); similar to putative GTPase activating protein [Oryza sativa (japonica cultivar-group)] (GB:XP_468334.1); contains InterPro domain RabGAP/TBC do... ; ">
      <seq>agaagctcagctgagtaatctagcttcggtaacacaagttattgatcctaaacttcatcaacacttagagacattaggtggaggtgattacctatttgctatccgtatgctcatggttttgttccgtcgagaattctcttttgctgattcattatatctttgggagatgatgtgggcgttggaatatgatcccgacttgtttcttatgtatgaagaccctgacttagctgctgcaaaatctgaaggatctaaaggaagagcaaaatcgacacgccagtgtgggaaatttgagagagaaaatctgaaaaatcgaagcaaaggtactgaagctcccctcccaatttccgttttcctagtagccagtgtccttaaggacaagagcacaaagttgcttacagaagctaaaggactagacgacgttgttcagatactgaatgacatgactggaaacctggacgcgaagaaggcttgcactagtgcaatgaaacttcacaagaaatatctcaaaaaggcagccaatgccaacaggtaacaaaacacaaaaagccaaagaaagcgcgctacgcaattcataagccatgaaggtaatgtaaaatgaagcttgtgatggtacttcccctgttcaacgttgcaacagcacttctacagggtaagaatcctatcgtgattttcgatatttgattcagatatttttggttatgttgaggaagagttactgttttcgaatacattactatggcttgatttattgaagccaatgtaaatttccatttttcatcccccagctccaatttgggaagtctttttgtatacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="+" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="126294" stop="128090"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="126594" g_stop="126661" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="68" r_length="68" r_score="0.941"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="126662" i_stop="126748" i_length="87">
            <donor d_prob="0.992" d_score="0.92"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126749" g_stop="126846" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="69" r_stop="166" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126847" i_stop="126915" i_length="69">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126916" g_stop="127176" g_length="261"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="427" r_length="261" r_score="0.985"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127177" i_stop="127266" i_length="90">
            <donor d_prob="0.847" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="127267" g_stop="127350" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="428" r_stop="511" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="127351" i_stop="127536" i_length="186">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="127537" g_stop="127784" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="512" r_stop="759" r_length="248" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="+" ref_id="SGN-U602828" ref_strand="-">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>759</cumulative_length_of_scored_exons>
        <coverage percentage="0.932" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U602828" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="126594" e_stop="126661"/>
          <exon e_start="126749" e_stop="126846"/>
          <exon e_start="126916" e_stop="127176"/>
          <exon e_start="127267" e_stop="127350"/>
          <exon e_start="127537" e_stop="127784"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAGCTCAGCTGAGTAATCTTGCTTCAGTAACACAAGTTATTGACCCTAAACTTCATCACCACTTAGGTATTTTATGATCTTTTCCCAGTAAACAAACAATTTATCGTCTAATTTTCTTCGTGAAATGAATATGATTTTGATCATTTCTCACAGAGACATTAGGTGGAGGTGATTACCTATTTGCTATCCGTATGCTCATGGTTTTGTTCCGTCGAGAATTCTCTTTTGCTGATTCATTATATCTTTGGGAGGTACGACTTCTCTCCTGAATACTTAGTCTCTAAATGTTGAACTTCTCAGTCATTGCCTTGTTGCAACAGATGATGTGGGCGTTGGAATACGATCCCGACTTGTTTCTTATGTATGAAGACCCTGACTTAGCTGCTGCAAAATCTGAAGGATCTAAAGGAAGAGCAAAATCAACACGCCAGTGTGGGAAATTTGAGAGAGAAAATCTGAAAAATCGAAGCAAAGGTACTGAAGCTCCACTCCCAATTTCCGTTTTCCTAGTAGCCAGTGTCCTCAAGGACAAGAGCACAAAGTTGCTTACAGAAGCTAAAGGACTAGACGACGTTGTTCAGGTTGGTTTCGGAAGTACATAAAATTTAAACATCAATAGTCTTTTCAACGAAGAAAATTCTTTCGAATCAATATATTTGAACTATTAACAGATACTGAATGACATGACTGGAAACCTGGACGCGAAGAAGGCTTGCACTAGTGCAATGAAACTTCACAAGAAATATCTCAAAAAGGTAATGTACATCTAACTCAGGTGCAACACCACAAGTACTACTACTCTCTCCGGTCCTAATAACTCGTTACTCCTGCTAAAATTCGTTACAATAATACTTGTCGTTTTAGAAAATCAAAATGATATCCTTTGCTACTACTCAAATAAGTTGTGAATTTCACTTTCTAATGATGATTGCTTAAAACAGGCAGCCAATGCCAACAGGTAACAAAACAC-AAAAGCCAAAGAAAGCGCGTTACGCAATTCATAAGCCATGAAGGTAATGTAAAAATGAAGCTTGTGATGGTACTTCCCCTGTTCAACGTTGCAACAGTGTTGCTACAGGGTAAGAATCCTATCGCGATTTTCGATATTTGATTCAGGTATTTTTGGTTATGTTGAGGAAGAGGTACTGTTTTCGAATACATTACTATGGCTTGATTTATTGAAGCCAAT</genome_strand>
        <mrna_strand>AGAAGCTCAGCTGAGTAATCTAGCTTCGGTAACACAAGTTATTGATCCTAAACTTCATCAACACTTAG.......................................................................................AGACATTAGGTGGAGGTGATTACCTATTTGCTATCCGTATGCTCATGGTTTTGTTCCGTCGAGAATTCTCTTTTGCTGATTCATTATATCTTTGGGAG.....................................................................ATGATGTGGGCGTTGGAATATGATCCCGACTTGTTTCTTATGTATGAAGACCCTGACTTAGCTGCTGCAAAATCTGAAGGATCTAAAGGAAGAGCAAAATCGACACGCCAGTGTGGGAAATTTGAGAGAGAAAATCTGAAAAATCGAAGCAAAGGTACTGAAGCTCCCCTCCCAATTTCCGTTTTCCTAGTAGCCAGTGTCCTTAAGGACAAGAGCACAAAGTTGCTTACAGAAGCTAAAGGACTAGACGACGTTGTTCAG..........................................................................................ATACTGAATGACATGACTGGAAACCTGGACGCGAAGAAGGCTTGCACTAGTGCAATGAAACTTCACAAGAAATATCTCAAAAAG..........................................................................................................................................................................................GCAGCCAATGCCAACAGGTAACAAAACACAAAAAGCCAAAGAAAGCGCGCTACGCAATTCATAAGCCATGAAGGTAATGT-AAAATGAAGCTTGTGATGGTACTTCCCCTGTTCAACGTTGCAACAGCACTTCTACAGGGTAAGAATCCTATCGTGATTTTCGATATTTGATTCAGATATTTTTGGTTATGTTGAGGAAGAGTTACTGTTTTCGAATACATTACTATGGCTTGATTTATTGAAGCCAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U576426" ref_strand="+" ref_description="SGN-U576426 Tomato 200607#2 [6 ESTs aligned] (*GB) gi|13183175|gb|AAK15088.1|AF240005_1 (e_value=2e-16) 2S; (*SWP) sp|P04403|2SS_BEREX (e_value=2e-14) 2S sulfur-rich seed storage protein OS=Bertholletia excelsa GN=BE2S1; ">
      <seq>ggcgattggcggccaatcggccgaattgaccatcacaaacacttgcaaattgcaattaattaccaaaagtaattagccatggggaatatttcacttgttgctgctcttttattgtgcttgttagcattcgcaaatgctaacacgttctccgttacagtatctgtgacggagaacgacaatccacaaagctgtcaagagcagattcagagtcagagactcaatcactgcaggatgtatatttcaagaagccaccaatactttaacgacgagttgagcatggtaacagatgacgatcatgagatcaaccaaacccaagaacatctccaacaatgttgccaagaattgaggaacatggacactcaatgccgatgcccggcgcttaaaaaaatggtgatgcaggattgcggtagacaaggcgaagaggcgcaacgtatgttagggaaagctcgttatattccgcgtatgtgtaacattcaacccgctcaatgtagcttctaattgatatagaagctcgatcagtataaaaaattacgttgaaagtactataataatgaacacacaatcgtgtgtatgtatgggaattaagcaagggttaatttggttttatcttatgggaaatgaaagagacttgagacttgttttatatgcttgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="-" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="135250" stop="133649"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="134940" g_stop="134741" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="230" r_length="200" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="134740" i_stop="134372" i_length="369">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="134371" g_stop="133949" g_length="423"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="653" r_length="423" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="-" ref_id="SGN-U576426" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>623</cumulative_length_of_scored_exons>
        <coverage percentage="0.954" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U576426" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="134940" e_stop="134741"/>
          <exon e_start="134371" e_stop="133949"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCACAAACACTTGCAAATTGCAATTAATTACCAAAAGTAATTAGCCATGGGGAATATTTCACTTGTTGCTGCTCTTTTATTGTGCTTGTTAGCATTCGCAAATGCTAACACGTTCTCCGTTACAGTATCTGTGACGGAGAACGACAATCCACAAAGCTGTCAAGAGCAGATTCAGAGTCAGAGACTCAATCACTGCAGGTAAAAATTACTTAATTATACATAAAGAAATTAAAGTATTTTTTTAAAAAATTAATTTTTTATTTTAAGAAAATTAAAATATGAGTACATTAAATTTATTTTAAAAATTAATCGATTTAACTCTTATACTTTAAATCAGGTCAAATAAAGTGAAATTGAGCAAATACTATCCTTATACCACAATATTGTTTTACAAAAAAGACCAATGACACGTAAAACAAATATAAAATTATAACACACAAAGTAATGCCTTCACACAAACATAGAACTTAGTAATATCGACTCAATTTTTCTTAAAAAGTCCATTCATAACAACAAGTCAAACTTTTACGTACTAACATAAAATTCTAAATACGTTACTGATTTCAGGATGTATATTTCAAGAAGCCACCAATACTTTAACGACGAGTTGAGCATGGTAACAGATGACGATCATGAGATCAACCAAACCCAAGAACATCTCCAACAATGTTGCCAAGAATTGAGGAACATGGACACTCAATGCCGATGCCCGGCGCTTAAGAAAATGGTGATGCAGGATTGCGGTAGACAAGGCGAAGAGGCGCAACGTATGTTAGGGAAAGCTCGTTATATTCCGCGTATGTGTAACATTCAACCCGCTCAATGTAGCTTCTAATTGATATAGAAGCTCGATCAGTATAAAAAATTACGTTGAAAGTACTATAATAATGAACACACAATCGTGTGTATGTATGGGAATTAAGCAAGGGTTAATTTGGTTTTATCTTATGGGAAATGAAAGAGACTTGAGACTTGTTTTATATGCTTGTT</genome_strand>
        <mrna_strand>CATCACAAACACTTGCAAATTGCAATTAATTACCAAAAGTAATTAGCCATGGGGAATATTTCACTTGTTGCTGCTCTTTTATTGTGCTTGTTAGCATTCGCAAATGCTAACACGTTCTCCGTTACAGTATCTGTGACGGAGAACGACAATCCACAAAGCTGTCAAGAGCAGATTCAGAGTCAGAGACTCAATCACTGCAG.................................................................................................................................................................................................................................................................................................................................................................................GATGTATATTTCAAGAAGCCACCAATACTTTAACGACGAGTTGAGCATGGTAACAGATGACGATCATGAGATCAACCAAACCCAAGAACATCTCCAACAATGTTGCCAAGAATTGAGGAACATGGACACTCAATGCCGATGCCCGGCGCTTAAAAAAATGGTGATGCAGGATTGCGGTAGACAAGGCGAAGAGGCGCAACGTATGTTAGGGAAAGCTCGTTATATTCCGCGTATGTGTAACATTCAACCCGCTCAATGTAGCTTCTAATTGATATAGAAGCTCGATCAGTATAAAAAATTACGTTGAAAGTACTATAATAATGAACACACAATCGTGTGTATGTATGGGAATTAAGCAAGGGTTAATTTGGTTTTATCTTATGGGAAATGAAAGAGACTTGAGACTTGTTTTATATGCTTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U575311" ref_strand="+" ref_description="SGN-U575311 Tomato 200607#2 [22 ESTs aligned] (*GB) gi|157360457|emb|CAO69680.1| (e_value=0) unnamed; (*ATH) AT3G20580.1 (e_value=0) | Symbol: None | phytochelatin synthetase-related, contains Pfam PF04833: Phytochelatin synthetase-like conserved region; supporting cDNA gi:26452232:dbj:AK118605.1: | chr3:7187862-7190568 REVERSE | Aliases: K10D20.12; (*SWP) sp|Q9LJU0|CBL10_ARATH (e_value=0) COBRA-like protein 10 OS=Arabidopsis thaliana GN=COBL10; ">
      <seq>tctccattttcgtccatttttcccccttgaccaccccacgccgttgtgtcatttcacacaacggcattagctggtgatcatcgatcaccggtctcttctgctttcatcattcccgtgaatgtgatcgcaaacaaaatcatttaaaaacaaaagcccagatatattcctccataattaaaggaatgcaaattccatggaggaatatctcttgggtcgtactagttttggttgcgtgcagttgtcaaacctgtaacgggcaggattacggaggagaggaaaaaccggtagcagcaccgccaccggagcaagagacttgcgatggaatcttcatcacctataatttcgatggacgagaaaagatatatccattagtgaagaatgtatctgcacagggatggtcattcaagtcgatgttaacggtgttgaatgccggaacttttgagctgaaatcatggcaagttttcgtcggatttcagcataacgagcttttagtatcggcggaaggtgcagttgcaattgacggcgatggatttccggtacgggtgggtaaaaatggtactacattggctgggtatccacaatccgatttgaaaacggcgattgataccgccggtgattttactcagatgtcagctcgaatcaatattaaggggacgcaatttggtcttagagagaaaacaaatccaatgccttcaacaatcaagctcgtcaatgaaggatacaaatgccctgctcctaagcgctataaaagttacatgcatgtttgttgcaagagggatcttaaattcaagcctaagaaggtggttaccaagttcatgcctcgtcgttatggagatctttccataacgtacgatgttctatcagcattcacgaataggtatcaggctcaagtcacactcgacaatctgaatcctttgggtcgtcttgatcattggaacttaacgtgggagtggatgaggaacgagttcattaacacaattaaaggcgcgcatactcacaaaattgatccttctgaatgtatttacggaccacaaggacaatattacaaggatttcgatttcactactgtgataaattgccaaaagaaaccaatcatttccgatttacctaaggagaaagcaaacgatgacaaatttgggaagttgccttattgttgtagaaacggaactcttttgtcacctataatgaacgaaacagaagcaaggtcgattttccagatggaagttttcaaacttccccctgatttaaacagaaccgcgttaaatccacctcaaaactggaaaatcacgggcacaattaacccgtcttattcatgtggaccgccagtcagaattgatccatcagtattcccggatcctaaaggaatcggaattgctactgctgttgctagttggcaaattacttgtaacattacgcgtcctaagcccaaagcagccaaatgttgtgtttctttctcggcttattatgctgcatccgttatcccctgcaacacttgcgcttgtggctgtgaagcgacgtctaaatgtgacgcgaacaaaaagccactacttctccctccagaagcgctactcgtcccttttgaaaatagggacttaatggcgaaagcttggagtaatatcaaacatcttggccctatgcctaagaaactaccttgtcctgataattgtggagtgagcatcaattggcatgtggatagtaactataaaacaggatggactgcgcgtataacgctctttaactggggaaatgacgcgtttgaaaactggttttcctctatccaaatgaagaaagatgtagctaatggctatgaaaacgtgtactcgtttaacggtacaaggttacctaaagaaaagagtaacactatatttatgcaaggtttacctggtttgaaattcttggttggagaggttaatgggactaatcctaataaggatccaagagtacctggaaaacaacaatcaattatttcatttttgaagaagaatacaccacatattaacgtcgatggtggcgatggattcccttctaagatattcttcaatggtgaagaatgcgcgcttccaccagagtttcctaaaaacactgcagcattcaaatccaaatttggtgtttttccaacagttttgcttgctcttttaactttctttcttttgaaggataggttacactgattgtatcattcaaccccatgatatatatgacttaatctctttctttaatacttttcggtacaatagcttgtaactactatcattttgagttctgtcccattttacgtgacacatttttaaaatggtcatatttctatatatattattgcggtgagctttgatgttcaatagtaatgtaatctagttatgtcagcaaaatgaagaaagaaagaaaaagaaatatgttgtatgatcatgtctttgtttacatctcttttaatttatatgatcaaatgaaaagtatctttttcatgtttattaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="-" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="138670" stop="135513"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="138370" g_stop="137625" g_length="746"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="747" r_length="747" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="137624" i_stop="137532" i_length="93">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="137531" g_stop="135813" g_length="1719"/>
          <reference_exon_boundary r_type="cDNA" r_start="748" r_stop="2474" r_length="1727" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="-" ref_id="SGN-U575311" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>2465</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U575311" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="138370" e_stop="137625"/>
          <exon e_start="137531" e_stop="135813"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCTATTTTCGTCCATTTTTTCCCCTT-ACCACCCCACGCCGTTGTGTCATTTCACACAACGGCATTAGCTGGTGATCATCGATCACCGGTCTCTTCTGGTTTCATCATTCCCGTGAATGTGATCGCAAACAAAGTCATTTAAAAACAAAATCCCAGATATATTCCTCCATAATTAAAGGAATGCAAATTCCATGGAGGAATATCTCTTGGGTCGTACTAGTTTTGGTTGCGTGCAGTTATCAAACATGTAACGGGCAGGATTACGGAGGAGACGAAAAAACGGTAGCAGCACCGCCACCGGAGCAAGAGAATTGCGATGGAATCTTCATCACCTATAATTTCGATGGACGAGAAAAGATATATCCATTAGTGAAGAATGTATCCGCACAGGGATGGTCATTCAAGTCGATGTTAACGGTGTTGAATGCCGGAACTTTTGAGCTGAAATCATGGCAAGTTTTCATCGGATTTCAGCATAACGAGCTTTTAGTATCGGCGGACGGTGCAGTTGCAATTGACGGCGATGGATTTCCGGTACGGGTGGGTAAAAATGGTACAACATTGGCTGGGTATCCACAATCCGATTTGAAAACGGCGATTGATACCGCCGGTGATTTTACTCAGATGTCAGCTCAAATCAATATTAAGGGGACGCAATTTGGTCTTAGAGAGAAAACAAATCCAATGCCTTCAACAATCAAGCTCGTCAATGAAGGATACAAATGCCCTGCTCCTAAGCGCTATAGTACGTATGTCGTGAATACTTATCTGCACCGAGTATTTACATCAAATTAACGAATGTATTATTCAATTTTGGTATTTCGATGTTTAATTGCAGAAAGTTACATGCATGTCTGTTGCAAGAGGGATCTTAAATTCAAGCCTAAGAAGGTGGTTACCAAGTTCATGCCTCGTCGTTATGGAGATCTTTCCATAACTTACGATGTTCTATCAGCATTCACGAATAGGTATCAGGCTCAAGTCACACTCGACAATCTGAATCCTTTGGGTCGTCTTGATCATTGGAACTTAACGTGGGAGTGGATGAGGAACGAGTTCATTAACACAATTAAAGGCGCGCATACTCACAAAATTGATCCTTCTGAATGTATTTACGGACCACAAGGACAATATTACAAGGATTTCGATTTCACTCCTGTGATAAATTGCCAAAAGAAACCAATCATTTCCGATTTACCTAAGGAGAAAGCAAACGATGACAAATTTGGGAAGTTGCCTTATTGTTGTAGAAACGGAACTCTTTTGTCACCTATAATGAACGAAACAGAAGCAAGGTCGATTTTCCAGATGGAAGTTTTCAAACTTCCCCCTGATTTAAACAGAACCGCGTTAAATCCACCTCAAAACTGGAAAATCACGGGCACAATTAACCCGTCTTATTCATGTGGACCGCCAGTCAGAATTGATCCATCAGTATTCCCGGATCCTAAAGGAATCGGAATTGCTACTGCTGTTGCTAGTTGGCAAATTACTTGTAACATTACGCGTCCTAAGCCCAAAGCAGCCAAATGTTGTGTTTCTTTTTCGGCTTATTATGCTGCATCCGTTATCCCCTGCAACACTTGCGCTTGTGGCTGTGAAGAGACGTCTAAATGTGACGCGAACAAAAAGCCACTACTTCTCCCTCCAGAAGCGCTACTCGTCCCTTTTGAAAATAGGGACTTAATGGCGAAAGCTTGGAGCAATATCAAACATCTTGGCCCTATGCCTAAGAAACTACCTTGTCCTGATAATTGCGGAGTGAGCATCAATTGGCATGTGGATAGTAACTATAAAACAGGATGGACTGCGCGTATAACGCTCTTTAACTGGGGAAATGACGCGTTTGAAAACTGGTTTTCCGCTATCCAAATGAAGAAAGATGTAGCTAATGGCTATGAAAACGTGTACTCGTTTAACGGTACAAGGTTACCTAAAGAAAAGAGTAACACTATATTTATGCAAGGTTTACCTGGTTTGAAATTCTTGGTTGGAGAGGTTAATGGGACTAATCCTAATAAGGATCCAAGAGTACCTGGAAAACAACAATCAATTATTTCATTTTTGAAGAAGAATACACCACATATCAACGTCGATGCTGGCGATGGATTCCCTTCTAAGATATTCTTTAATGGTGAAGAATGCGCGCTTCCACCAGAGTTTCCTAAAAACACTGCAGCATTCAAATCCAAATTTGGTGTTTTTCCAGCAGTTTTGCTTGCTCTCTTAACTTTCTTTCTTTTGACGGATAGGTTACACTGATAGTATCATTCAACCTGATGATATAT--GACTTAAACTCTTTCTTTACTATACTTTGTGGTGCACTAGCTTGTAACTAC--T-A--TT--CTTCTGTCTCATTTTACGTGGCACATTTTTAGTATGGTCACATTTCTATATACATTATTACATTGAGCTTTGAAGTTGAAGAGTAATGTAATCAAGTTATGACAGCAAAATGAAGAAAGAAAGAAAAAAAAATGT-TGGTATGATCATGTCTTTGTTTACGTCTCTTTAAATTTATATGATCAAATGAGAAGTATCTTTTTCATGTTTATTAATG</genome_strand>
        <mrna_strand>TCTCCATTTTCGTCCATTTTTCCCCCTTGACCACCCCACGCCGTTGTGTCATTTCACACAACGGCATTAGCTGGTGATCATCGATCACCGGTCTCTTCTGCTTTCATCATTCCCGTGAATGTGATCGCAAACAAAATCATTTAAAAACAAAAGCCCAGATATATTCCTCCATAATTAAAGGAATGCAAATTCCATGGAGGAATATCTCTTGGGTCGTACTAGTTTTGGTTGCGTGCAGTTGTCAAACCTGTAACGGGCAGGATTACGGAGGAGAGGAAAAACCGGTAGCAGCACCGCCACCGGAGCAAGAGACTTGCGATGGAATCTTCATCACCTATAATTTCGATGGACGAGAAAAGATATATCCATTAGTGAAGAATGTATCTGCACAGGGATGGTCATTCAAGTCGATGTTAACGGTGTTGAATGCCGGAACTTTTGAGCTGAAATCATGGCAAGTTTTCGTCGGATTTCAGCATAACGAGCTTTTAGTATCGGCGGAAGGTGCAGTTGCAATTGACGGCGATGGATTTCCGGTACGGGTGGGTAAAAATGGTACTACATTGGCTGGGTATCCACAATCCGATTTGAAAACGGCGATTGATACCGCCGGTGATTTTACTCAGATGTCAGCTCGAATCAATATTAAGGGGACGCAATTTGGTCTTAGAGAGAAAACAAATCCAATGCCTTCAACAATCAAGCTCGTCAATGAAGGATACAAATGCCCTGCTCCTAAGCGCTATA.............................................................................................AAAGTTACATGCATGTTTGTTGCAAGAGGGATCTTAAATTCAAGCCTAAGAAGGTGGTTACCAAGTTCATGCCTCGTCGTTATGGAGATCTTTCCATAACGTACGATGTTCTATCAGCATTCACGAATAGGTATCAGGCTCAAGTCACACTCGACAATCTGAATCCTTTGGGTCGTCTTGATCATTGGAACTTAACGTGGGAGTGGATGAGGAACGAGTTCATTAACACAATTAAAGGCGCGCATACTCACAAAATTGATCCTTCTGAATGTATTTACGGACCACAAGGACAATATTACAAGGATTTCGATTTCACTACTGTGATAAATTGCCAAAAGAAACCAATCATTTCCGATTTACCTAAGGAGAAAGCAAACGATGACAAATTTGGGAAGTTGCCTTATTGTTGTAGAAACGGAACTCTTTTGTCACCTATAATGAACGAAACAGAAGCAAGGTCGATTTTCCAGATGGAAGTTTTCAAACTTCCCCCTGATTTAAACAGAACCGCGTTAAATCCACCTCAAAACTGGAAAATCACGGGCACAATTAACCCGTCTTATTCATGTGGACCGCCAGTCAGAATTGATCCATCAGTATTCCCGGATCCTAAAGGAATCGGAATTGCTACTGCTGTTGCTAGTTGGCAAATTACTTGTAACATTACGCGTCCTAAGCCCAAAGCAGCCAAATGTTGTGTTTCTTTCTCGGCTTATTATGCTGCATCCGTTATCCCCTGCAACACTTGCGCTTGTGGCTGTGAAGCGACGTCTAAATGTGACGCGAACAAAAAGCCACTACTTCTCCCTCCAGAAGCGCTACTCGTCCCTTTTGAAAATAGGGACTTAATGGCGAAAGCTTGGAGTAATATCAAACATCTTGGCCCTATGCCTAAGAAACTACCTTGTCCTGATAATTGTGGAGTGAGCATCAATTGGCATGTGGATAGTAACTATAAAACAGGATGGACTGCGCGTATAACGCTCTTTAACTGGGGAAATGACGCGTTTGAAAACTGGTTTTCCTCTATCCAAATGAAGAAAGATGTAGCTAATGGCTATGAAAACGTGTACTCGTTTAACGGTACAAGGTTACCTAAAGAAAAGAGTAACACTATATTTATGCAAGGTTTACCTGGTTTGAAATTCTTGGTTGGAGAGGTTAATGGGACTAATCCTAATAAGGATCCAAGAGTACCTGGAAAACAACAATCAATTATTTCATTTTTGAAGAAGAATACACCACATATTAACGTCGATGGTGGCGATGGATTCCCTTCTAAGATATTCTTCAATGGTGAAGAATGCGCGCTTCCACCAGAGTTTCCTAAAAACACTGCAGCATTCAAATCCAAATTTGGTGTTTTTCCAACAGTTTTGCTTGCTCTTTTAACTTTCTTTCTTTTGAAGGATAGGTTACACTGATTGTATCATTCAACCCCATGATATATATGACTTAATCTCTTTCTTTA--ATACTTTTCGGTACAATAGCTTGTAACTACTATCATTTTGAGTTCTGTCCCATTTTACGTGACACATTTTTAAAATGGTCATATTTCTATATATATTATTGCGGTGAGCTTTGATGTTCAATAGTAATGTAATCTAGTTATGTCAGCAAAATGAAGAAAGAAAGAAAAAGAAATATGTTGTATGATCATGTCTTTGTTTACATCTCTTTTAATTTATATGATCAAATGAAAAGTATCTTTTTCATGTTTATTAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U575310" ref_strand="+" ref_description="SGN-U575310 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>tggattcccttctaagatattctttaatggtgaagaatgcgcgcttccaccagagtttcctaaaaacactgcagcattcaaatccaaatttggtgtttttccagcagtggtgcttgctctcttaactttctttcttttgacggataggttacactgatagtatcattcaacctgatgatatatgacttaaactctttctttactatactttgtggtgcactagcttgtaactactattcttctgtctcattttacgtggcacatttttagtatggtcacatttctatatacattattacattgagctttgaagttgaagagtaatgtaatcaagttatgacagcaaaatgaagaaagaaagaaaaaaaaatgttggtatgatcatgtctttgtttacgtctctttaaatttatatgatcaaatgagaagtatctttttcatgtttattaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="-" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="136564" stop="135513"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="136264" g_stop="135813" g_length="452"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="452" r_length="452" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="-" ref_id="SGN-U575310" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>452</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U575310" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="136264" e_stop="135813"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGATTCCCTTCTAAGATATTCTTTAATGGTGAAGAATGCGCGCTTCCACCAGAGTTTCCTAAAAACACTGCAGCATTCAAATCCAAATTTGGTGTTTTTCCAGCAGTTTTGCTTGCTCTCTTAACTTTCTTTCTTTTGACGGATAGGTTACACTGATAGTATCATTCAACCTGATGATATATGACTTAAACTCTTTCTTTACTATACTTTGTGGTGCACTAGCTTGTAACTACTATTCTTCTGTCTCATTTTACGTGGCACATTTTTAGTATGGTCACATTTCTATATACATTATTACATTGAGCTTTGAAGTTGAAGAGTAATGTAATCAAGTTATGACAGCAAAATGAAGAAAGAAAGAAAAAAAAATGTTGGTATGATCATGTCTTTGTTTACGTCTCTTTAAATTTATATGATCAAATGAGAAGTATCTTTTTCATGTTTATTAATG</genome_strand>
        <mrna_strand>TGGATTCCCTTCTAAGATATTCTTTAATGGTGAAGAATGCGCGCTTCCACCAGAGTTTCCTAAAAACACTGCAGCATTCAAATCCAAATTTGGTGTTTTTCCAGCAGTGGTGCTTGCTCTCTTAACTTTCTTTCTTTTGACGGATAGGTTACACTGATAGTATCATTCAACCTGATGATATATGACTTAAACTCTTTCTTTACTATACTTTGTGGTGCACTAGCTTGTAACTACTATTCTTCTGTCTCATTTTACGTGGCACATTTTTAGTATGGTCACATTTCTATATACATTATTACATTGAGCTTTGAAGTTGAAGAGTAATGTAATCAAGTTATGACAGCAAAATGAAGAAAGAAAGAAAAAAAAATGTTGGTATGATCATGTCTTTGTTTACGTCTCTTTAAATTTATATGATCAAATGAGAAGTATCTTTTTCATGTTTATTAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U563073" ref_strand="+" ref_description="SGN-U563073 Tomato 200607#2 [21 ESTs aligned] (*GB) gi|2507165|sp|P09607|PME21_SOLLC (e_value=0) Pectinesterase-2; (*ATH) AT1G11580.1 (e_value=2e-145) | Symbol: None | pectin methylesterase, putative, similar to pectin methylesterase GI:1617583 from (Lycopersicon esculentum) | chr1:3888690-3890811 FORWARD | Aliases: T23J18.24, T23J18_24, ATPMEPCRA; (*SWP) sp|P09607|PME21_SOLLC (e_value=0) Pectinesterase-2 OS=Solanum lycopersicum GN=PME2.1; ">
      <seq>cgaacttctaaaatggctactcctcaacaacctttgttaacaaaaacacacaaacaaaattccataatcagcttcaagatcctcacttttgttgtaactttgtttgttgctctcttcttagttgtgtttcttgttgctccatatcaatttgagattaaacattctaatctgtgtaaaactgcacaagattcccaactctgtctcagttatgtttctgatttaatatccaatgaaattgtcacatctgattcagatggactaagtattctgaagaaatttttagtttactctgttcatcaaatgaacaatgcaattccagtggttcgcaaaatcaagaatcagatcaatgacattcgtgaacaaggggctttaactgattgtcttgagcttcttgatctgtcagttgatttagtatgtgattcaattgcagcaattgataagagaagtcgttcggagcatgccaatgcgcaaagttggctaagtggtgtgcttactaaccacgttacgtgcttggatgagcttgattcctttactaaagctatgataaatggaacgaatcttgatgagttgatctcgagagctaaggtagcattggcgatgcttgcgtctgtgacaactccaaatgatgaagttttgaggccgggtttaggaaaaatgccatcttgggtgagttcgagggataggaagctgatggagagttcgggtaaggacattggagcgaatgcagtggtggcaaaagatggaacagggaaatatcgaacacttgctgaagctgttgctgcagcaccagataagagtaagacgcgttatgtaatttatgtaaagaggggaacttataaagagaatgttgaggtgagtagcaggaaaatgaatttgatgattattggtgatggcatgtatgctaccatcattactgggagccttaatgttgtcgatggatcaacaaccttccactctgccactcttgctgcagttggcaaaggatttatactacaggacatatgtatacagaacacagcaggaccagctaaacaccaagctgttgcacttcgagttggagctgataagtctgtcataaatcgttgtcgtatcgatgcttatcaagacaccctttatgcacattctcaaaggcaattctatcgagactcctacgtgacagggactattgatttcatattcggtaatgcagcagttgtattccagaaatgccagctcgtagctagaaaaccgggtaaataccagcaaaacatggtgactgcacaaggcaggacggacccaaatcaggccacggggacatcaattcagttttgtgatataatagcaagtcctgacctaaaaccagtcgtgaaagaattcccaacatatcttggtaggccatggaaaaaatattcaagaactgtagtgatggaatcatacttgggtggtctcattgatccatcgggttgggctgagtggcacggagattttgcgttaaagacattgtattatggtgaatttatgaataatggacctggtgctggtactagtaagcgtgtcaagtggcctggctatcatgtcattactgaccccgctgaagctatgtcattcactgtggctaagctgattcagggcggatcatggttgaggtctactgacgtggcgtatgtggatggattatatgattagagtgatataaaattactctttgtttatgtaacaagacatctttaaaaagttcaaagtaagtagtagtaatatatccatatgaagtgccacatgagcagggcagagccgggattaagtgtctaaagcataacacacaactctagtgtgacaagcatttacatggctcattccttactactaagtcgtcaataagttcagttaaggggttcataagttaatatacgtatatatatttatgttggcgataaagctgaaactgatgatgctttaatgtaattatagttttctgaaaaaggatatgtgtaatattaggttttccctgatgtttatggttgtggggtggtggttatgataaaaatatgcaagatgaaagtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="-" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="144603" stop="141671"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="144303" g_stop="143337" g_length="967"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="967" r_length="967" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="143336" i_stop="143132" i_length="205">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="143131" g_stop="142940" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="968" r_stop="1159" r_length="192" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="142939" i_stop="142852" i_length="88">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="142851" g_stop="141971" g_length="881"/>
          <reference_exon_boundary r_type="cDNA" r_start="1160" r_stop="2040" r_length="881" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="-" ref_id="SGN-U563073" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>2040</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U563073" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="144303" e_stop="143337"/>
          <exon e_start="143131" e_stop="142940"/>
          <exon e_start="142851" e_stop="141971"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAACTTCTAAAATGGCTACTCCTCAACAACCTTTGTTAACAAAAACACACAAACAAAATTCCATAATCAGCTTCAAGATCCTCACTTTTGTTGTAACTTTGTTTGTTGCTCTCTTCTTAGTTGTGTTTCTTGTTGCTCCATATCAATTTGAGATTAAACATTCTAATCTGTGTAAAACTGCACAAGATTCCCAACTCTGTCTCAGTTATGTTTCTGATTTAATATCCAATGAAATTGTCACATCTGATTCAGATGGACTAAGTATTCTGAAGAAATTTTTAGTTTACTCTGTTCATCAAATGAACAATGCAATTCCAGTGGTTCGCAAAATCAAGAATCAGATCAATGACATTCGTGAACAAGGGGCTTTAACTGATTGTCTTGAGCTTCTTGATCTGTCAGTTGATTTAGTATGTGATTCAATTGCAGCAATTGATAAGAGAAGTCGTTCGGAGCATGCCAATGCGCAAAGTTGGCTAAGTGGTGTGCTTACTAACCACGTTACGTGCTTGGATGAGCTTGATTCCTTTACTAAAGCTATGATAAATGGAACGAATCTTGATGAGTTGATCTCGAGAGCTAAGGTAGCATTGGCGATGCTTGCGTCTGTGACAACTCCAAATGATGAAGTTTTGAGGCCGGGTTTAGGAAAAATGCCATCTTGGGTGAGTTCGAGGGATAGGAAGCTGATGGAGAGTTCGGGTAAGGACATTGGAGCGAATGCAGTGGTGGCAAAAGATGGAACAGGGAAATATCGAACACTTGCTGAAGCTGTTGCTGCAGCACCAGATAAGAGTAAGACGCGTTATGTAATTTATGTAAAGAGGGGAACTTATAAAGAGAATGTTGAGGTGAGTAGCAGGAAAATGAATTTGATGATTATTGGTGATGGCATGTATGCTACCATCATTACTGGGAGCCTTAATGTTGTCGATGGATCAACAACCTTCCACTCTGCCACTCTTGGTAGGCTTTAAATAACTTATGTATATATAGTAGATGTTGAATTCTTTGGCCTCTTCGTATATATACTTTTGATATTTCAAACCCCCTTACTGAAAATCCTTGCTCCGCCATCATGACCTAGGATTAAGGATTGTGTTATTTGTAGTTCATATTTGATTAATGAACAAGTGTACGTATATACTCGTGAATTTTCATCATATTGCAGCTGCAGTTGGCAAAGGATTTATACTACAGGACATATGTATACAGAACACAGCAGGACCAGCTAAACACCAAGCTGTTGCACTTCGAGTTGGAGCTGATAAGTCTGTCATAAATCGTTGTCGTATCGATGCTTATCAAGACACCCTTTATGCACATTCTCAAAGGCAATTCTATCGAGACTCCTACGTGACAGGTACTTGTGAAGTAGATTACCTCAAATGTGCTATACTCTCTATTGAACTCGGTATTAAAAAGTTCAAATCTTGAATCCATCTCTGCAGGGACTATTGATTTCATATTCGGTAATGCAGCAGTTGTATTCCAGAAATGCCAGCTCGTAGCTAGAAAACCGGGTAAATACCAGCAAAACATGGTGACTGCACAAGGCAGGACGGACCCAAATCAGGCCACGGGGACATCAATTCAGTTTTGTGATATAATAGCAAGTCCTGACCTAAAACCAGTCGTGAAAGAATTCCCAACATATCTTGGTAGGCCATGGAAAAAATATTCAAGAACTGTAGTGATGGAATCATACTTGGGTGGTCTCATTGATCCATCGGGTTGGGCTGAGTGGCACGGAGATTTTGCGTTAAAGACATTGTATTATGGTGAATTTATGAATAATGGACCTGGTGCTGGTACTAGTAAGCGTGTCAAGTGGCCTGGCTATCATGTCATTACTGACCCCGCTGAAGCTATGTCATTCACTGTGGCTAAGCTGATTCAGGGCGGATCATGGTTGAGGTCTACTGACGTGGCGTATGTGGATGGATTATATGATTAGAGTGATATAAAATTACTCTTTGTTTATGTAACAAGACATCTTTAAAAAGTTCAAAGTAAGTAGTAGTAATATATCCATATGAAGTGCCACATGAGCAGGGCAGAGCCGGGATTAAGTGTCTAAAGCATAACACACAACTCTAGTGTGACAAGCATTTACATGGCTCATTCCTTACTACTAAGTCGTCAATAAGTTCAGTTAAGGGGTTCATAAGTTAATATACGTATATATATTTATGTTGGCGATAAAGCTGAAACTGATGATGCTTTAATGTAATTATAGTTTTCTGAAAAAGGATATGTGTAATATTAGGTTTTCCCTGATGTTTATGGTTGTGGGGTGGTGGTTATGATAAAAATATGCAAGATGAAAGTC</genome_strand>
        <mrna_strand>CGAACTTCTAAAATGGCTACTCCTCAACAACCTTTGTTAACAAAAACACACAAACAAAATTCCATAATCAGCTTCAAGATCCTCACTTTTGTTGTAACTTTGTTTGTTGCTCTCTTCTTAGTTGTGTTTCTTGTTGCTCCATATCAATTTGAGATTAAACATTCTAATCTGTGTAAAACTGCACAAGATTCCCAACTCTGTCTCAGTTATGTTTCTGATTTAATATCCAATGAAATTGTCACATCTGATTCAGATGGACTAAGTATTCTGAAGAAATTTTTAGTTTACTCTGTTCATCAAATGAACAATGCAATTCCAGTGGTTCGCAAAATCAAGAATCAGATCAATGACATTCGTGAACAAGGGGCTTTAACTGATTGTCTTGAGCTTCTTGATCTGTCAGTTGATTTAGTATGTGATTCAATTGCAGCAATTGATAAGAGAAGTCGTTCGGAGCATGCCAATGCGCAAAGTTGGCTAAGTGGTGTGCTTACTAACCACGTTACGTGCTTGGATGAGCTTGATTCCTTTACTAAAGCTATGATAAATGGAACGAATCTTGATGAGTTGATCTCGAGAGCTAAGGTAGCATTGGCGATGCTTGCGTCTGTGACAACTCCAAATGATGAAGTTTTGAGGCCGGGTTTAGGAAAAATGCCATCTTGGGTGAGTTCGAGGGATAGGAAGCTGATGGAGAGTTCGGGTAAGGACATTGGAGCGAATGCAGTGGTGGCAAAAGATGGAACAGGGAAATATCGAACACTTGCTGAAGCTGTTGCTGCAGCACCAGATAAGAGTAAGACGCGTTATGTAATTTATGTAAAGAGGGGAACTTATAAAGAGAATGTTGAGGTGAGTAGCAGGAAAATGAATTTGATGATTATTGGTGATGGCATGTATGCTACCATCATTACTGGGAGCCTTAATGTTGTCGATGGATCAACAACCTTCCACTCTGCCACTCTTG.............................................................................................................................................................................................................CTGCAGTTGGCAAAGGATTTATACTACAGGACATATGTATACAGAACACAGCAGGACCAGCTAAACACCAAGCTGTTGCACTTCGAGTTGGAGCTGATAAGTCTGTCATAAATCGTTGTCGTATCGATGCTTATCAAGACACCCTTTATGCACATTCTCAAAGGCAATTCTATCGAGACTCCTACGTGACAG........................................................................................GGACTATTGATTTCATATTCGGTAATGCAGCAGTTGTATTCCAGAAATGCCAGCTCGTAGCTAGAAAACCGGGTAAATACCAGCAAAACATGGTGACTGCACAAGGCAGGACGGACCCAAATCAGGCCACGGGGACATCAATTCAGTTTTGTGATATAATAGCAAGTCCTGACCTAAAACCAGTCGTGAAAGAATTCCCAACATATCTTGGTAGGCCATGGAAAAAATATTCAAGAACTGTAGTGATGGAATCATACTTGGGTGGTCTCATTGATCCATCGGGTTGGGCTGAGTGGCACGGAGATTTTGCGTTAAAGACATTGTATTATGGTGAATTTATGAATAATGGACCTGGTGCTGGTACTAGTAAGCGTGTCAAGTGGCCTGGCTATCATGTCATTACTGACCCCGCTGAAGCTATGTCATTCACTGTGGCTAAGCTGATTCAGGGCGGATCATGGTTGAGGTCTACTGACGTGGCGTATGTGGATGGATTATATGATTAGAGTGATATAAAATTACTCTTTGTTTATGTAACAAGACATCTTTAAAAAGTTCAAAGTAAGTAGTAGTAATATATCCATATGAAGTGCCACATGAGCAGGGCAGAGCCGGGATTAAGTGTCTAAAGCATAACACACAACTCTAGTGTGACAAGCATTTACATGGCTCATTCCTTACTACTAAGTCGTCAATAAGTTCAGTTAAGGGGTTCATAAGTTAATATACGTATATATATTTATGTTGGCGATAAAGCTGAAACTGATGATGCTTTAATGTAATTATAGTTTTCTGAAAAAGGATATGTGTAATATTAGGTTTTCCCTGATGTTTATGGTTGTGGGGTGGTGGTTATGATAAAAATATGCAAGATGAAAGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U595466" ref_strand="+" ref_description="SGN-U595466 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|1256263|gb|AAB67739.1| (e_value=1e-46) pectin methylesterase PME2.1 [Lycopersicon esculentum]; (*SWP) sp|P09607|PME21_SOLLC (e_value=8e-48) Pectinesterase-2 OS=Solanum lycopersicum GN=PME2.1; ">
      <seq>ctaaaatggctactcctcaacaacctttgttaacaaaaacacacaaacagggtgcgatattcagcttcaagagcctgacttttgttgtaactttgtttgttgctctcttcttagttgtgtttcttgttgctccatatcaatttgagattaaacattctaatctgtgtaaaactgcacaagattcccaactctgtctcagatatgtttctgatttaatatccaatgaaattgtcacatctgattcagatggactaagtattctgaagaaatttttagtttactctgttcatcaaatgaacaatgcatttccagtggttcgcaaaatcaagaatcagatcaatgacattcgtgaacaaggggctttaactgattggtgttgagctatccttctatctgtcagttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="-" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="144596" stop="143611"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="144296" g_stop="143896" g_length="401"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="405" r_length="405" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="-" ref_id="SGN-U595466" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>401</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U595466" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="144296" e_stop="143896"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAAAATGGCTACTCCTCAACAACCTTTGTTAACAAAAACACACAAACAAAATTCCATAATCAGCTTCAAGATCCTCACTTTTGTTGTAACTTTGTTTGTTGCTCTCTTCTTAGTTGTGTTTCTTGTTGCTCCATATCAATTTGAGATTAAACATTCTAATCTGTGTAAAACTGCACAAGATTCCCAACTCTGTCTCAGTTATGTTTCTGATTTAATATCCAATGAAATTGTCACATCTGATTCAGATGGACTAAGTATTCTGAAGAAATTTTTAGTTTACTCTGTTCATCAAATGAACAATGCAATTCCAGTGGTTCGCAAAATCAAGAATCAGATCAATGACATTCGTGAACAAGGGGCTTTAACTGATT-GTCTTGAGCT-T-CTT-GATCTGTCAGTTGAT</genome_strand>
        <mrna_strand>CTAAAATGGCTACTCCTCAACAACCTTTGTTAACAAAAACACACAAACAGGGTGCGATATTCAGCTTCAAGAGCCTGACTTTTGTTGTAACTTTGTTTGTTGCTCTCTTCTTAGTTGTGTTTCTTGTTGCTCCATATCAATTTGAGATTAAACATTCTAATCTGTGTAAAACTGCACAAGATTCCCAACTCTGTCTCAGATATGTTTCTGATTTAATATCCAATGAAATTGTCACATCTGATTCAGATGGACTAAGTATTCTGAAGAAATTTTTAGTTTACTCTGTTCATCAAATGAACAATGCATTTCCAGTGGTTCGCAAAATCAAGAATCAGATCAATGACATTCGTGAACAAGGGGCTTTAACTGATTGGTGTTGAGCTATCCTTCTATCTGTCAGTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U604218" ref_strand="+" ref_description="SGN-U604218 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|113205171|gb|AAT40519.2| (e_value=1e-14) hypothetical; ">
      <seq>caaaaaccagagcatgcctcaactttggcaactattgaggcatcacaattggttgtcgttgaggataatcaaaatgtgataaaaattggttcttcgacatgtgcaactactatattgaatgcacatcatggtgtatctcaaagattggaggatacaaattcaagagttgtggttggtgcatcactacttgattctcgacagaaattaggtgatgttaatgcacataaatcagatgaaaatcataggcagcatgtagttgttggttctaatgttaaaaaaatttctgtgagtgacaagtgatgcattgggaaggtctgatgccccaaataagtttgctaacctacgagatgaggaaagtgatgaagaggattggttggatcagtgctttgagaatgcagctagggatgcaaatatttctcctacgcaacaacgcaataacaaaaagaaacatggaagaaagaattgttgggatggcaacgtgactgaggagtttgttccaaggcacttaccaatgtgactagcaaagcagaatcatatgacagtgtcaacatattcaacaagatccaataattccaagaagaagtgatgaagtatcaagtgttgttggatagtttgaagatgaagacaacagccaaatactaaaagttactttagatgggcaatcaattctttttaaaatcataaatgacatgaaaatcatacgcactatttaagcatcctcatatgtaatatcatcatacagagtattaccaactctgtggtgatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0226J04-1XHul/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0226J04.1" temp_strand="+" temp_description="C07HBa0226J04.1  AC236943.1 htgs_phase:1 submitted_to_sgn_as:gi|242118061|gb|AC236943.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0226J04, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces">
        <position start="164348" stop="165713"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="164648" g_stop="165413" g_length="766"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="766" r_length="766" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0226J04.1" gen_strand="+" ref_id="SGN-U604218" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>766</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0226J04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U604218" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="164648" e_stop="165413"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAACCAGAGCATGCCTCAACTTTGGCAACTATTGAGGCATCACAATTGGTTGTCGTTGAGGATAATCAAAATGTGATAAAAATTGGTTCTTCGACATGTGCAACTACTATATTGAATGCACATCATGGTGTATCTCAAAGATTGGAGGATACAAATTCAAGAGTTGTGGTTGGTGCATCACTAGTTGATTCTCGACAGAAATTAGGTGATGTTAATGCACATAAATCAGATGAAAATCATAGGCAGCATGTAGTTGTTGGTTCTAATGTTAAAAAAATTTCTGTGAGTGACAAGTGATGCATTGGGAAGGTCTGATGCCCCAAATAAGTTTGCTAACCTACGAGATGAGGAAAGTGATGAAGAGGATTGGTTGGATCAGTGCTTTGAGAATGCAGCTAGGGATGCAAATATTTCTCCTACGCAACAACGCAATAACAAAAAGAAACATGGAAGAAAGAATTGTTGGGATGGCAACGTGACTGAGGAGTTTGTTCCAAGGCACTTACCAATGTGACTAGCAAAGCAGAATCATATGACAGTGTCAACATATTCAACAAGATCCAATAATTCCAAGAAGAAGTGATGAAGTATCAAGTGTTGTTGGATAGTTTGAAGATGAAGACAAAAGCAAAATACTAAAAGTTACTTTAGATGGCAAATCAATTCTTTTTAAAATCATAAATGAGATGAAAATCATAGGCACTATTTAGGCATCCTCATATGTAATATCATCATAGAGAGTATTACAAACTCTGTGGTGATC</genome_strand>
        <mrna_strand>CAAAAACCAGAGCATGCCTCAACTTTGGCAACTATTGAGGCATCACAATTGGTTGTCGTTGAGGATAATCAAAATGTGATAAAAATTGGTTCTTCGACATGTGCAACTACTATATTGAATGCACATCATGGTGTATCTCAAAGATTGGAGGATACAAATTCAAGAGTTGTGGTTGGTGCATCACTACTTGATTCTCGACAGAAATTAGGTGATGTTAATGCACATAAATCAGATGAAAATCATAGGCAGCATGTAGTTGTTGGTTCTAATGTTAAAAAAATTTCTGTGAGTGACAAGTGATGCATTGGGAAGGTCTGATGCCCCAAATAAGTTTGCTAACCTACGAGATGAGGAAAGTGATGAAGAGGATTGGTTGGATCAGTGCTTTGAGAATGCAGCTAGGGATGCAAATATTTCTCCTACGCAACAACGCAATAACAAAAAGAAACATGGAAGAAAGAATTGTTGGGATGGCAACGTGACTGAGGAGTTTGTTCCAAGGCACTTACCAATGTGACTAGCAAAGCAGAATCATATGACAGTGTCAACATATTCAACAAGATCCAATAATTCCAAGAAGAAGTGATGAAGTATCAAGTGTTGTTGGATAGTTTGAAGATGAAGACAACAGCCAAATACTAAAAGTTACTTTAGATGGGCAATCAATTCTTTTTAAAATCATAAATGACATGAAAATCATACGCACTATTTAAGCATCCTCATATGTAATATCATCATACAGAGTATTACCAACTCTGTGGTGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>39</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="8475" PGL_stop="11737"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="8475" e_stop="8635"/>
            <exon e_start="11163" e_stop="11737"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.989" acc_prob="0.940" e_score="1.000"/>
          <exon-only e_score="0.979"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="8475" e_stop="8635" e_length="161"/>
          </exon>
          <intron i_serial="1" don_prob="0.989" acc_prob="0.940">
            <gDNA_intron_boundary i_start="8636" i_stop="11162" i_length="2527"/>
          </intron>
          <exon e_serial="2" e_score="0.979">
            <gDNA_exon_boundary e_start="11163" e_stop="11737" e_length="575"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8475" stop="8635"/>
              <exon start="11163" stop="11737"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U604138" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACACAGAGTTGGGATGGTCGTGTTCAGTACTTCTCCGATGATCAAATTTCGCCGGTAACGAAGGTTACAGGTCGCCGTGGTTCCATATTTACTGTCTACTTTTGCAACCAAAAGCTTCGGTCTCCGAGTTCTCTTTCCTCAAATGGTCACTGTCGTTTCTA : GAAGTAGGTGGCACACAATTAACAGCTTCAAACGGCATACTACTTTGGAAGTGCATAACCCTGAAGGCGGAGAAGATGAGATCAGTAATTTACCTGATTCCATTCTTCTTCACATTCTTTCATATCTTCCTACCAGAGATGTTGTGGGCACATGTATACTTTCAACAAGGTGGAAGAATCTTTGGACTTGTGTTGAAAACATTGACTTTGATGACTCATTTCTCTACTCAAGTAGGGTTTTTGGTTATCCGATGAAGGTCACTAGTTTCATGCACCTTGTTCACAGATTTCTTCAACTTCGAGAAAAATCAGTCATAAAAAAGTTTCGCCTTTCCTGCCGTGTTTGCTTCAGTGCCTCTCATGTATGTTCATGGCTTTCAACTGTTATTAGGCATAATGTTCAAGATCTTGATCTCTGTCTTTTTGTAGAAGAACCTTTTATGTTGCTTCAATGTGTTTCCAGTTGCAAGACACTTACTTCTCTAAAACTTGAAATGAATTGTGTTCTGGAACTACCTACTAGTACTTATTTTCCTTTCCTCAAAATCTTGCACCTATGTCTTGTCACATTTCGA</gDNA_template>
            <first_frame> T  Q  S  W  D  G  R  V  Q  Y  F  S  D  D  Q  I  S  P  V  T  K  V  T  G  R  R  G  S  I  F  T  V  Y  F  C  N  Q  K  L  R  S  P  S  S  L  S  S  N  G  H  C  R  F  * :   K  *  V  A  H  N  *  Q  L  Q  T  A  Y  Y  F  G  S  A  *  P  *  R  R  R  R  *  D  Q  *  F  T  *  F  H  S  S  S  H  S  F  I  S  S  Y  Q  R  C  C  G  H  M  Y  T  F  N  K  V  E  E  S  L  D  L  C  *  K  H  *  L  *  *  L  I  S  L  L  K  *  G  F  W  L  S  D  E  G  H  *  F  H  A  P  C  S  Q  I  S  S  T  S  R  K  I  S  H  K  K  V  S  P  F  L  P  C  L  L  Q  C  L  S  C  M  F  M  A  F  N  C  Y  *  A  *  C  S  R  S  *  S  L  S  F  C  R  R  T  F  Y  V  A  S  M  C  F  Q  L  Q  D  T  Y  F  S  K  T  *  N  E  L  C  S  G  T  T  Y  *  Y  L  F  S  F  P  Q  N  L  A  P  M  S  C  H  I  S  </first_frame>
            <second_frame>  H  R  V  G  M  V  V  F  S  T  S  P  M  I  K  F  R  R  *  R  R  L  Q  V  A  V  V  P  Y  L  L  S  T  F  A  T  K  S  F  G  L  R  V  L  F  P  Q  M  V  T  V  V  S   : R  S  R  W  H  T  I  N  S  F  K  R  H  T  T  L  E  V  H  N  P  E  G  G  E  D  E  I  S  N  L  P  D  S  I  L  L  H  I  L  S  Y  L  P  T  R  D  V  V  G  T  C  I  L  S  T  R  W  K  N  L  W  T  C  V  E  N  I  D  F  D  D  S  F  L  Y  S  S  R  V  F  G  Y  P  M  K  V  T  S  F  M  H  L  V  H  R  F  L  Q  L  R  E  K  S  V  I  K  K  F  R  L  S  C  R  V  C  F  S  A  S  H  V  C  S  W  L  S  T  V  I  R  H  N  V  Q  D  L  D  L  C  L  F  V  E  E  P  F  M  L  L  Q  C  V  S  S  C  K  T  L  T  S  L  K  L  E  M  N  C  V  L  E  L  P  T  S  T  Y  F  P  F  L  K  I  L  H  L  C  L  V  T  F  R </second_frame>
            <third_frame>   T  E  L  G  W  S  C  S  V  L  L  R  *  S  N  F  A  G  N  E  G  Y  R  S  P  W  F  H  I  Y  C  L  L  L  Q  P  K  A  S  V  S  E  F  S  F  L  K  W  S  L  S  F  L  :  E  V  G  G  T  Q  L  T  A  S  N  G  I  L  L  W  K  C  I  T  L  K  A  E  K  M  R  S  V  I  Y  L  I  P  F  F  F  T  F  F  H  I  F  L  P  E  M  L  W  A  H  V  Y  F  Q  Q  G  G  R  I  F  G  L  V  L  K  T  L  T  L  M  T  H  F  S  T  Q  V  G  F  L  V  I  R  *  R  S  L  V  S  C  T  L  F  T  D  F  F  N  F  E  K  N  Q  S  *  K  S  F  A  F  P  A  V  F  A  S  V  P  L  M  Y  V  H  G  F  Q  L  L  L  G  I  M  F  K  I  L  I  S  V  F  L  *  K  N  L  L  C  C  F  N  V  F  P  V  A  R  H  L  L  L  *  N  L  K  *  I  V  F  W  N  Y  L  L  V  L  I  F  L  S  S  K  S  C  T  Y  V  L  S  H  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0226J04.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8533" stop="8635"/>
                    <exon start="11163" stop="11737"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>678</number_coding_nucleotides>
                  <number_encoded_amino_acids>226</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RRLQVAVVPYLLSTFATKSFGLRVLFPQMVTVVSRSRWHTINSFKRHTTLEVHNPEGGEDEISNLPDSILLHILSYLPTRDVVGTCILSTRWKNLWTCVENIDFDDSFLYSSRVFGYPMKVTSFMHLVHRFLQLREKSVIKKFRLSCRVCFSASHVCSWLSTVIRHNVQDLDLCLFVEEPFMLLQCVSSCKTLTSLKLEMNCVLELPTSTYFPFLKILHLCLVTFR</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="12031" PGL_stop="12503"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="12031" e_stop="12410"/>
            <exon e_start="12493" e_stop="12503"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.958" acc_prob="0.995" e_score="0.976"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.976">
            <gDNA_exon_boundary e_start="12031" e_stop="12410" e_length="380"/>
          </exon>
          <intron i_serial="1" don_prob="0.958" acc_prob="0.995">
            <gDNA_intron_boundary i_start="12411" i_stop="12492" i_length="82"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="12493" e_stop="12503" e_length="11"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12031" stop="12410"/>
              <exon start="12493" stop="12503"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U602673" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTATGAGAAGAGAAATCAAATTGCTTTTCGTGCTGTTGAGCTCTTTAGAGGGCTACACAAGATTAGTGCTGCGAGAATATCTAGCAGGGCTATTGAGGTAATTACTAACAAGACGTAAATTAGCTACAGTACATCACAGTCTAGAATGTTGAATGTCTAAATATGCAGTACTGATGTCTTCTCATTTTTCCTTTTCTGTGATCCCACCTTGTTGCTTGGCAAAGTCTCTCTTCATCGCAGATATAGAGAAAGATCGACTTCCAGTATTTTATAGCTTGACACATTTGGAGTTGAGTATGGAACTTGAAAATCATTCCATTGGACCATTGATGGAACTGCTCCAATGTCTGCCAAAGTTGCAATCACTTCATTTTTCTGAG : GGACTTGACCC</gDNA_template>
            <first_frame> V  *  E  E  K  S  N  C  F  S  C  C  *  A  L  *  R  A  T  Q  D  *  C  C  E  N  I  *  Q  G  Y  *  G  N  Y  *  Q  D  V  N  *  L  Q  Y  I  T  V  *  N  V  E  C  L  N  M  Q  Y  *  C  L  L  I  F  P  F  L  *  S  H  L  V  A  W  Q  S  L  S  S  S  Q  I  *  R  K  I  D  F  Q  Y  F  I  A  *  H  I  W  S  *  V  W  N  L  K  I  I  P  L  D  H  *  W  N  C  S  N  V  C  Q  S  C  N  H  F  I  F  L  R :   D  L  T  </first_frame>
            <second_frame>  Y  E  K  R  N  Q  I  A  F  R  A  V  E  L  F  R  G  L  H  K  I  S  A  A  R  I  S  S  R  A  I  E  V  I  T  N  K  T  *  I  S  Y  S  T  S  Q  S  R  M  L  N  V  *  I  C  S  T  D  V  F  S  F  F  L  F  C  D  P  T  L  L  L  G  K  V  S  L  H  R  R  Y  R  E  R  S  T  S  S  I  L  *  L  D  T  F  G  V  E  Y  G  T  *  K  S  F  H  W  T  I  D  G  T  A  P  M  S  A  K  V  A  I  T  S  F  F  *   : G  T  *  P </second_frame>
            <third_frame>   M  R  R  E  I  K  L  L  F  V  L  L  S  S  L  E  G  Y  T  R  L  V  L  R  E  Y  L  A  G  L  L  R  *  L  L  T  R  R  K  L  A  T  V  H  H  S  L  E  C  *  M  S  K  Y  A  V  L  M  S  S  H  F  S  F  S  V  I  P  P  C  C  L  A  K  S  L  F  I  A  D  I  E  K  D  R  L  P  V  F  Y  S  L  T  H  L  E  L  S  M  E  L  E  N  H  S  I  G  P  L  M  E  L  L  Q  C  L  P  K  L  Q  S  L  H  F  S  E  :  G  L  D   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0226J04.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="12183" stop="12410"/>
                    <exon start="12493" stop="12501"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MSKYAVLMSSHFSFSVIPPCCLAKSLFIADIEKDRLPVFYSLTHLELSMELENHSIGPLMELLQCLPKLQSLHFSEGLD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="18148" PGL_stop="35589"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="18148" e_stop="19061"/>
            <exon e_start="19940" e_stop="20165"/>
            <exon e_start="20755" e_stop="20977"/>
            <exon e_start="21760" e_stop="21973"/>
            <exon e_start="22226" e_stop="22521"/>
            <exon e_start="24057" e_stop="24181"/>
            <exon e_start="25572" e_stop="25629"/>
            <exon e_start="26146" e_stop="26152"/>
            <exon e_start="26641" e_stop="26666"/>
            <exon e_start="26914" e_stop="26965"/>
            <exon e_start="27379" e_stop="27403"/>
            <exon e_start="29228" e_stop="29250"/>
            <exon e_start="31443" e_stop="31497"/>
            <exon e_start="34274" e_stop="34282"/>
            <exon e_start="35456" e_stop="35589"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.988" acc_prob="0.999" e_score="0.998"/>
          <exon-intron don_prob="0.874" acc_prob="0.980" e_score="0.996"/>
          <exon-intron don_prob="0.998" acc_prob="0.962" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.883" acc_prob="0.598" e_score="0.544"/>
          <exon-intron don_prob="0.102" acc_prob="0.785" e_score="0.552"/>
          <exon-intron don_prob="0.000" acc_prob="0.560" e_score="0.714"/>
          <exon-intron don_prob="0.256" acc_prob="0.926" e_score="0.538"/>
          <exon-intron don_prob="0.710" acc_prob="0.000" e_score="0.538"/>
          <exon-intron don_prob="0.500" acc_prob="0.424" e_score="0.640"/>
          <exon-intron don_prob="0.999" acc_prob="0.995" e_score="0.522"/>
          <exon-intron don_prob="0.970" acc_prob="0.988" e_score="0.527"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.778"/>
          <exon-only e_score="0.600"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="18148" e_stop="19061" e_length="914"/>
          </exon>
          <intron i_serial="1" don_prob="0.988" acc_prob="0.999">
            <gDNA_intron_boundary i_start="19062" i_stop="19939" i_length="878"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="19940" e_stop="20165" e_length="226"/>
          </exon>
          <intron i_serial="2" don_prob="0.874" acc_prob="0.980">
            <gDNA_intron_boundary i_start="20166" i_stop="20754" i_length="589"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="20755" e_stop="20977" e_length="223"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.962">
            <gDNA_intron_boundary i_start="20978" i_stop="21759" i_length="782"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="21760" e_stop="21973" e_length="214"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="21974" i_stop="22225" i_length="252"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="22226" e_stop="22521" e_length="296"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="22522" i_stop="24056" i_length="1535"/>
          </intron>
          <exon e_serial="6" e_score="0.544">
            <gDNA_exon_boundary e_start="24057" e_stop="24181" e_length="125"/>
          </exon>
          <intron i_serial="6" don_prob="0.883" acc_prob="0.598">
            <gDNA_intron_boundary i_start="24182" i_stop="25571" i_length="1390"/>
          </intron>
          <exon e_serial="7" e_score="0.552">
            <gDNA_exon_boundary e_start="25572" e_stop="25629" e_length="58"/>
          </exon>
          <intron i_serial="7" don_prob="0.102" acc_prob="0.785">
            <gDNA_intron_boundary i_start="25630" i_stop="26145" i_length="516"/>
          </intron>
          <exon e_serial="8" e_score="0.714">
            <gDNA_exon_boundary e_start="26146" e_stop="26152" e_length="7"/>
          </exon>
          <intron i_serial="8" don_prob="0.000" acc_prob="0.560">
            <gDNA_intron_boundary i_start="26153" i_stop="26640" i_length="488"/>
          </intron>
          <exon e_serial="9" e_score="0.538">
            <gDNA_exon_boundary e_start="26641" e_stop="26666" e_length="26"/>
          </exon>
          <intron i_serial="9" don_prob="0.256" acc_prob="0.926">
            <gDNA_intron_boundary i_start="26667" i_stop="26913" i_length="247"/>
          </intron>
          <exon e_serial="10" e_score="0.538">
            <gDNA_exon_boundary e_start="26914" e_stop="26965" e_length="52"/>
          </exon>
          <intron i_serial="10" don_prob="0.710" acc_prob="0.000">
            <gDNA_intron_boundary i_start="26966" i_stop="27378" i_length="413"/>
          </intron>
          <exon e_serial="11" e_score="0.640">
            <gDNA_exon_boundary e_start="27379" e_stop="27403" e_length="25"/>
          </exon>
          <intron i_serial="11" don_prob="0.500" acc_prob="0.424">
            <gDNA_intron_boundary i_start="27404" i_stop="29227" i_length="1824"/>
          </intron>
          <exon e_serial="12" e_score="0.522">
            <gDNA_exon_boundary e_start="29228" e_stop="29250" e_length="23"/>
          </exon>
          <intron i_serial="12" don_prob="0.999" acc_prob="0.995">
            <gDNA_intron_boundary i_start="29251" i_stop="31442" i_length="2192"/>
          </intron>
          <exon e_serial="13" e_score="0.527">
            <gDNA_exon_boundary e_start="31443" e_stop="31497" e_length="55"/>
          </exon>
          <intron i_serial="13" don_prob="0.970" acc_prob="0.988">
            <gDNA_intron_boundary i_start="31498" i_stop="34273" i_length="2776"/>
          </intron>
          <exon e_serial="14" e_score="0.778">
            <gDNA_exon_boundary e_start="34274" e_stop="34282" e_length="9"/>
          </exon>
          <intron i_serial="14" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="34283" i_stop="35455" i_length="1173"/>
          </intron>
          <exon e_serial="15" e_score="0.600">
            <gDNA_exon_boundary e_start="35456" e_stop="35589" e_length="134"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18148" stop="19061"/>
              <exon start="19940" stop="20165"/>
              <exon start="20755" stop="20977"/>
              <exon start="21760" stop="21973"/>
              <exon start="22226" stop="22521"/>
              <exon start="24057" stop="24181"/>
              <exon start="25572" stop="25629"/>
              <exon start="26146" stop="26152"/>
              <exon start="26641" stop="26666"/>
              <exon start="26914" stop="26965"/>
              <exon start="27379" stop="27403"/>
              <exon start="29228" stop="29250"/>
              <exon start="31443" stop="31497"/>
              <exon start="34274" stop="34282"/>
              <exon start="35456" stop="35589"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U581521" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18988" stop="19061"/>
              <exon start="19940" stop="20165"/>
              <exon start="20755" stop="20895"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U591914" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCACCCTAGTTTTTTTCTGCTATTTCAACATACACTTTCTTCCATAAATTCTTGTTTTTTGTATACATAAAAAAAAAAAACTTGTTTTGTGGATCATCACATCACATGTTTGATCTTGTTTTACACTGAGATTTCAATATTTTTCTCTGTGTTTATATCACACAAGTAGATCTCCTTCTCACTTACACAGAGTGCACATGGTTTTTCAGGCTCTTTCTACGTAGACGGAGCCGTGAAGAGAAACCTTTTTTTTTTTCTTTTCTTTTCAAGTTTTCTGTAAAATCTTGATCTGGGGTTTTGGGGTTTTTTGTGTTTTTGATCTTATAATAAAAAAAAGTTTTAATTTTTAGTCAAAACCCATCTGAATTTTCGCTTGCCAGCTCAAAGGATTTTGAACCATGATGTCTACAGTGAAGCAAGCAGCTTTTACAATCAATGGGTGTGATTTCATTCGGTCAAAGTCTCAATCTTTGGCTTCTACACGCCGTATCTCTCTACTTCCGCCATTACCGGCGATGAAGTCTCGCCGGAGCTCCGGTGTATCGGTGTCGAAGCCTGTTTTTGTTTCTTCTGTTGAGAGTTTTGGGGGTTTGAAGAGATCTAATGAGAAAACTGATAGTGGTTTGGTTAAGTGTAAGGCTTATGAAGCGGATCGGGCTGAGCCGATGGAAGGACCTGAATCGAAAGCGGAGTTGGCAAGGAAGATGAAGATCGGTGTTTATTTTGCTACTTGGTGGTTTTTGAATGTGATTTTTAATATTTATAATAAGAAAGTGTTGAATGCTTTTCCATTTCCTTGGTTAACATCAACTTTGTCACTTGCTGCTGGTTCACTTATTATGTTGATTTCTTGGACTCTTAGAATTGCAGAAGCTCCTAAAACTGATCTTGAATTCTGGAAAACTCTCTTACCG : GTTGCCATTGCACATACAATTGGGCATGTTGCAGCTACAGTGAGCATGTCAAAGGTGGCAGTTTCATTCACTCACATCATCAAGAGTGGTGAACCTGCTTTTAGTGTTTTGGTTTCAAGGTTCCTCTTGGGAGAGTCATTCCCTACCGCCGTTTACTTATCTCTTATCCCCATCATCGGTGGTTGTGGTCTTTCTGCGCTTACAGAGTTGAACTTCAACTGGATTG : GTTTCTCGGGTGCTATGATCTCGAATGTGGCATTTGTCTTCAGAAATATATTCTCCAAGAAGGGTATGAAGGGGAAGTCTGTTAGTGGGATGAACTACTATGCTTGCTTGTCTATGCTGTCTTTGTTGATTCTCACACCATTTGCCATTGCTGTTGAGGGACCACAAATGTGGGCTCTAGGATTTGAAAAGGCTGTCTCTCAAATCGGTCCCCAGATCGTCTG : GTGGATGGCGGCCCAGAGTGTATTTTATCACCTCTACAATCAAGTTTCGTACATGTCTTTGGATGAGATCTCTCCTTTGACGTTTAGTATTGGAAACACCATGAAACGTATATCAGTAATCGTCTCTTCCATCATTATCTTCCGTACACCCGTCCAGCCAGTCAACGCTCTTGGAGCTGCCATTGCGATTCTTGGAACTTTCTTGTACTCACAG : GCAAAACAATGAAGAGTGGGGATTTGCATACCGCGTTAGGGATAAAAGACGTTGAAGAGAACCTTGAGGTGTTGCGAATGACGTCTCTCAGGATCCTCAGTCTACCCTTACTTTGGGTTGAGTATGAAACTTATGAAGTATGTAGATAGCAATAATGGGTTAAAATTAACTCAAATCCTATAGAGTTACTAAGGCTGGTTTCCCTGTTTTGTTATTATTATTCGTAGAGACATCAACAAGTGTACTAATAAACTGAATACTTGGTTGAGAGTGGTATAAATTAGTTCATTTAAACA : AAAAAAAAAAAAAAGAATATAGAGGCAGTGTAGGTAATGCAAAACAAGAAAATTTCCCGGCAACTTCTCACTTTGCAAATATTTGACTGATTCATGGATTTTAATAAGATTGCCCCTCCCCGTCT : GCTAAAAGTAAAGCCTGCAGTAATGTCCGATCAATCAGATCCGCTCTTATTACAGAAT : GGTATTT : ATGAAAAGGGCACTAATGTCTCAAAA : GCAAGATAATCTCGATAACCTGATTTTGAACCAAACGACCCGGAAAAGAATT : GAGATGACGGAATGCAATGGAATGA : TGAGATCGAACATAAAGAGAATG : ATAAGAAGAAAAGTGAAACGAGAAACAGAGTGGGAGAAAATAAGTATCTGATAAG : GTAGAAGGC : TGATTTAATTAATCTTTTTCATTTGATGTATATCTAATTCATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN</gDNA_template>
            <first_frame> P  P  *  F  F  S  A  I  S  T  Y  T  F  F  H  K  F  L  F  F  V  Y  I  K  K  K  N  L  F  C  G  S  S  H  H  M  F  D  L  V  L  H  *  D  F  N  I  F  L  C  V  Y  I  T  Q  V  D  L  L  L  T  Y  T  E  C  T  W  F  F  R  L  F  L  R  R  R  S  R  E  E  K  P  F  F  F  S  F  L  F  K  F  S  V  K  S  *  S  G  V  L  G  F  F  V  F  L  I  L  *  *  K  K  V  L  I  F  S  Q  N  P  S  E  F  S  L  A  S  S  K  D  F  E  P  *  C  L  Q  *  S  K  Q  L  L  Q  S  M  G  V  I  S  F  G  Q  S  L  N  L  W  L  L  H  A  V  S  L  Y  F  R  H  Y  R  R  *  S  L  A  G  A  P  V  Y  R  C  R  S  L  F  L  F  L  L  L  R  V  L  G  V  *  R  D  L  M  R  K  L  I  V  V  W  L  S  V  R  L  M  K  R  I  G  L  S  R  W  K  D  L  N  R  K  R  S  W  Q  G  R  *  R  S  V  F  I  L  L  L  G  G  F  *  M  *  F  L  I  F  I  I  R  K  C  *  M  L  F  H  F  L  G  *  H  Q  L  C  H  L  L  L  V  H  L  L  C  *  F  L  G  L  L  E  L  Q  K  L  L  K  L  I  L  N  S  G  K  L  S  Y  R :   L  P  L  H  I  Q  L  G  M  L  Q  L  Q  *  A  C  Q  R  W  Q  F  H  S  L  T  S  S  R  V  V  N  L  L  L  V  F  W  F  Q  G  S  S  W  E  S  H  S  L  P  P  F  T  Y  L  L  S  P  S  S  V  V  V  V  F  L  R  L  Q  S  *  T  S  T  G  L  :  V  S  R  V  L  *  S  R  M  W  H  L  S  S  E  I  Y  S  P  R  R  V  *  R  G  S  L  L  V  G  *  T  T  M  L  A  C  L  C  C  L  C  *  F  S  H  H  L  P  L  L  L  R  D  H  K  C  G  L  *  D  L  K  R  L  S  L  K  S  V  P  R  S  S   : G  G  W  R  P  R  V  Y  F  I  T  S  T  I  K  F  R  T  C  L  W  M  R  S  L  L  *  R  L  V  L  E  T  P  *  N  V  Y  Q  *  S  S  L  P  S  L  S  S  V  H  P  S  S  Q  S  T  L  L  E  L  P  L  R  F  L  E  L  S  C  T  H  R :   Q  N  N  E  E  W  G  F  A  Y  R  V  R  D  K  R  R  *  R  E  P  *  G  V  A  N  D  V  S  Q  D  P  Q  S  T  L  T  L  G  *  V  *  N  L  *  S  M  *  I  A  I  M  G  *  N  *  L  K  S  Y  R  V  T  K  A  G  F  P  V  L  L  L  L  F  V  E  T  S  T  S  V  L  I  N  *  I  L  G  *  E  W  Y  K  L  V  H  L  N   : K  K  K  K  K  E  Y  R  G  S  V  G  N  A  K  Q  E  N  F  P  A  T  S  H  F  A  N  I  *  L  I  H  G  F  *  *  D  C  P  S  P  S  :  A  K  S  K  A  C  S  N  V  R  S  I  R  S  A  L  I  T  E   : W  Y  L :   *  K  G  H  *  C  L  K   : S  K  I  I  S  I  T  *  F  *  T  K  R  P  G  K  E  L :   R  *  R  N  A  M  E  *  :  *  D  R  T  *  R  E  * :   *  E  E  K  *  N  E  K  Q  S  G  R  K  *  V  S  D  K  :  V  E  G  :  *  F  N  *  S  F  S  F  D  V  Y  L  I  H  L  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F   </first_frame>
            <second_frame>  H  P  S  F  F  L  L  F  Q  H  T  L  S  S  I  N  S  C  F  L  Y  T  *  K  K  K  T  C  F  V  D  H  H  I  T  C  L  I  L  F  Y  T  E  I  S  I  F  F  S  V  F  I  S  H  K  *  I  S  F  S  L  T  Q  S  A  H  G  F  S  G  S  F  Y  V  D  G  A  V  K  R  N  L  F  F  F  L  F  F  S  S  F  L  *  N  L  D  L  G  F  W  G  F  L  C  F  *  S  Y  N  K  K  K  F  *  F  L  V  K  T  H  L  N  F  R  L  P  A  Q  R  I  L  N  H  D  V  Y  S  E  A  S  S  F  Y  N  Q  W  V  *  F  H  S  V  K  V  S  I  F  G  F  Y  T  P  Y  L  S  T  S  A  I  T  G  D  E  V  S  P  E  L  R  C  I  G  V  E  A  C  F  C  F  F  C  *  E  F  W  G  F  E  E  I  *  *  E  N  *  *  W  F  G  *  V  *  G  L  *  S  G  S  G  *  A  D  G  R  T  *  I  E  S  G  V  G  K  E  D  E  D  R  C  L  F  C  Y  L  V  V  F  E  C  D  F  *  Y  L  *  *  E  S  V  E  C  F  S  I  S  L  V  N  I  N  F  V  T  C  C  W  F  T  Y  Y  V  D  F  L  D  S  *  N  C  R  S  S  *  N  *  S  *  I  L  E  N  S  L  T   : G  C  H  C  T  Y  N  W  A  C  C  S  Y  S  E  H  V  K  G  G  S  F  I  H  S  H  H  Q  E  W  *  T  C  F  *  C  F  G  F  K  V  P  L  G  R  V  I  P  Y  R  R  L  L  I  S  Y  P  H  H  R  W  L  W  S  F  C  A  Y  R  V  E  L  Q  L  D  W :   F  L  G  C  Y  D  L  E  C  G  I  C  L  Q  K  Y  I  L  Q  E  G  Y  E  G  E  V  C  *  W  D  E  L  L  C  L  L  V  Y  A  V  F  V  D  S  H  T  I  C  H  C  C  *  G  T  T  N  V  G  S  R  I  *  K  G  C  L  S  N  R  S  P  D  R  L  :  V  D  G  G  P  E  C  I  L  S  P  L  Q  S  S  F  V  H  V  F  G  *  D  L  S  F  D  V  *  Y  W  K  H  H  E  T  Y  I  S  N  R  L  F  H  H  Y  L  P  Y  T  R  P  A  S  Q  R  S  W  S  C  H  C  D  S  W  N  F  L  V  L  T   : G  K  T  M  K  S  G  D  L  H  T  A  L  G  I  K  D  V  E  E  N  L  E  V  L  R  M  T  S  L  R  I  L  S  L  P  L  L  W  V  E  Y  E  T  Y  E  V  C  R  *  Q  *  W  V  K  I  N  S  N  P  I  E  L  L  R  L  V  S  L  F  C  Y  Y  Y  S  *  R  H  Q  Q  V  Y  *  *  T  E  Y  L  V  E  S  G  I  N  *  F  I  *  T  :  K  K  K  K  K  N  I  E  A  V  *  V  M  Q  N  K  K  I  S  R  Q  L  L  T  L  Q  I  F  D  *  F  M  D  F  N  K  I  A  P  P  R  L :   L  K  V  K  P  A  V  M  S  D  Q  S  D  P  L  L  L  Q  N  :  G  I   : Y  E  K  G  T  N  V  S  K  :  A  R  *  S  R  *  P  D  F  E  P  N  D  P  E  K  N   : *  D  D  G  M  Q  W  N  D :   E  I  E  H  K  E  N   : D  K  K  K  S  E  T  R  N  R  V  G  E  N  K  Y  L  I  R :   *  K  A :   D  L  I  N  L  F  H  L  M  Y  I  *  F  I  C  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  </second_frame>
            <third_frame>   T  L  V  F  F  C  Y  F  N  I  H  F  L  P  *  I  L  V  F  C  I  H  K  K  K  K  L  V  L  W  I  I  T  S  H  V  *  S  C  F  T  L  R  F  Q  Y  F  S  L  C  L  Y  H  T  S  R  S  P  S  H  L  H  R  V  H  M  V  F  Q  A  L  S  T  *  T  E  P  *  R  E  T  F  F  F  F  F  S  F  Q  V  F  C  K  I  L  I  W  G  F  G  V  F  C  V  F  D  L  I  I  K  K  S  F  N  F  *  S  K  P  I  *  I  F  A  C  Q  L  K  G  F  *  T  M  M  S  T  V  K  Q  A  A  F  T  I  N  G  C  D  F  I  R  S  K  S  Q  S  L  A  S  T  R  R  I  S  L  L  P  P  L  P  A  M  K  S  R  R  S  S  G  V  S  V  S  K  P  V  F  V  S  S  V  E  S  F  G  G  L  K  R  S  N  E  K  T  D  S  G  L  V  K  C  K  A  Y  E  A  D  R  A  E  P  M  E  G  P  E  S  K  A  E  L  A  R  K  M  K  I  G  V  Y  F  A  T  W  W  F  L  N  V  I  F  N  I  Y  N  K  K  V  L  N  A  F  P  F  P  W  L  T  S  T  L  S  L  A  A  G  S  L  I  M  L  I  S  W  T  L  R  I  A  E  A  P  K  T  D  L  E  F  W  K  T  L  L  P  :  V  A  I  A  H  T  I  G  H  V  A  A  T  V  S  M  S  K  V  A  V  S  F  T  H  I  I  K  S  G  E  P  A  F  S  V  L  V  S  R  F  L  L  G  E  S  F  P  T  A  V  Y  L  S  L  I  P  I  I  G  G  C  G  L  S  A  L  T  E  L  N  F  N  W  I   : G  F  S  G  A  M  I  S  N  V  A  F  V  F  R  N  I  F  S  K  K  G  M  K  G  K  S  V  S  G  M  N  Y  Y  A  C  L  S  M  L  S  L  L  I  L  T  P  F  A  I  A  V  E  G  P  Q  M  W  A  L  G  F  E  K  A  V  S  Q  I  G  P  Q  I  V  W :   W  M  A  A  Q  S  V  F  Y  H  L  Y  N  Q  V  S  Y  M  S  L  D  E  I  S  P  L  T  F  S  I  G  N  T  M  K  R  I  S  V  I  V  S  S  I  I  I  F  R  T  P  V  Q  P  V  N  A  L  G  A  A  I  A  I  L  G  T  F  L  Y  S  Q  :  A  K  Q  *  R  V  G  I  C  I  P  R  *  G  *  K  T  L  K  R  T  L  R  C  C  E  *  R  L  S  G  S  S  V  Y  P  Y  F  G  L  S  M  K  L  M  K  Y  V  D  S  N  N  G  L  K  L  T  Q  I  L  *  S  Y  *  G  W  F  P  C  F  V  I  I  I  R  R  D  I  N  K  C  T  N  K  L  N  T  W  L  R  V  V  *  I  S  S  F  K  Q :   K  K  K  K  R  I  *  R  Q  C  R  *  C  K  T  R  K  F  P  G  N  F  S  L  C  K  Y  L  T  D  S  W  I  L  I  R  L  P  L  P  V   : C  *  K  *  S  L  Q  *  C  P  I  N  Q  I  R  S  Y  Y  R  M :   V  F  :  M  K  R  A  L  M  S  Q  K :   Q  D  N  L  D  N  L  I  L  N  Q  T  T  R  K  R  I  :  E  M  T  E  C  N  G  M   : M  R  S  N  I  K  R  M  :  I  R  R  K  V  K  R  E  T  E  W  E  K  I  S  I  *  *   : G  R  R   : L  I  *  L  I  F  F  I  *  C  I  S  N  S  F  V  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0226J04.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18543" stop="19061"/>
                    <exon start="19940" stop="20165"/>
                    <exon start="20755" stop="20977"/>
                    <exon start="21760" stop="21973"/>
                    <exon start="22226" stop="22237"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1191</number_coding_nucleotides>
                  <number_encoded_amino_acids>397</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TMMSTVKQAAFTINGCDFIRSKSQSLASTRRISLLPPLPAMKSRRSSGVSVSKPVFVSSVESFGGLKRSNEKTDSGLVKCKAYEADRAEPMEGPESKAELARKMKIGVYFATWWFLNVIFNIYNKKVLNAFPFPWLTSTLSLAAGSLIMLISWTLRIAEAPKTDLEFWKTLLPVAIAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGESFPTAVYLSLIPIIGGCGLSALTELNFNWIGFSGAMISNVAFVFRNIFSKKGMKGKSVSGMNYYACLSMLSLLILTPFAIAVEGPQMWALGFEKAVSQIGPQIVWWMAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFRTPVQPVNALGAAIAILGTFLYSQAKQ*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0226J04.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="25595" stop="25629"/>
                    <exon start="26146" stop="26152"/>
                    <exon start="26641" stop="26666"/>
                    <exon start="26914" stop="26965"/>
                    <exon start="27379" stop="27403"/>
                    <exon start="29228" stop="29250"/>
                    <exon start="31443" stop="31493"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CPINQIRSYYRMVFMKRALMSQKQDNLDNLILNQTTRKRIEMTECNGMMRSNIKRMIRRKVKRETEWEKISI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="22533" e_stop="22925"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.947"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.947">
            <gDNA_exon_boundary e_start="22533" e_stop="22925" e_length="393"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22533" stop="22925"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U592366" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATAAACCTCCCAGAATTTGGCTCAAATAAACAGCATGCCTAAATTAGCGATACATGTTTGACATTGATCGATCAGAGGACCGATTAAAGTGAAATTTTGTGGACCGATTAACGATCAATAGAACTGGGTTCTGGGTTCATGAATCTACAGCTCTAACAAGACATCTTTATTTAACTTACAAAATTCGTTTCTGCTATAAAACAGAAAAGTTACCTTTAAAGTACAGATAACTCTTTGGGACAAGTGTTACGAACTTTTCCATCAAACCTTCAAATATTTAATAGCAGTCTGAACATCTTTATCGCCTCTACCGCTGCAGTTGAGCACGACCTTAGTTCCATTTGCTAGAGTTGGACACAGCTTCTCTAAGTAGGCGAGAGCATGAGATGTTT</gDNA_template>
            <first_frame> N  K  P  P  R  I  W  L  K  *  T  A  C  L  N  *  R  Y  M  F  D  I  D  R  S  E  D  R  L  K  *  N  F  V  D  R  L  T  I  N  R  T  G  F  W  V  H  E  S  T  A  L  T  R  H  L  Y  L  T  Y  K  I  R  F  C  Y  K  T  E  K  L  P  L  K  Y  R  *  L  F  G  T  S  V  T  N  F  S  I  K  P  S  N  I  *  *  Q  S  E  H  L  Y  R  L  Y  R  C  S  *  A  R  P  *  F  H  L  L  E  L  D  T  A  S  L  S  R  R  E  H  E  M  F </first_frame>
            <second_frame>  I  N  L  P  E  F  G  S  N  K  Q  H  A  *  I  S  D  T  C  L  T  L  I  D  Q  R  T  D  *  S  E  I  L  W  T  D  *  R  S  I  E  L  G  S  G  F  M  N  L  Q  L  *  Q  D  I  F  I  *  L  T  K  F  V  S  A  I  K  Q  K  S  Y  L  *  S  T  D  N  S  L  G  Q  V  L  R  T  F  P  S  N  L  Q  I  F  N  S  S  L  N  I  F  I  A  S  T  A  A  V  E  H  D  L  S  S  I  C  *  S  W  T  Q  L  L  *  V  G  E  S  M  R  C   </second_frame>
            <third_frame>   *  T  S  Q  N  L  A  Q  I  N  S  M  P  K  L  A  I  H  V  *  H  *  S  I  R  G  P  I  K  V  K  F  C  G  P  I  N  D  Q  *  N  W  V  L  G  S  *  I  Y  S  S  N  K  T  S  L  F  N  L  Q  N  S  F  L  L  *  N  R  K  V  T  F  K  V  Q  I  T  L  W  D  K  C  Y  E  L  F  H  Q  T  F  K  Y  L  I  A  V  *  T  S  L  S  P  L  P  L  Q  L  S  T  T  L  V  P  F  A  R  V  G  H  S  F  S  K  *  A  R  A  *  D  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0226J04.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="26258" PGL_stop="22508"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="26258" e_stop="25929"/>
            <exon e_start="24925" e_stop="24569"/>
            <exon e_start="23808" e_stop="23366"/>
            <exon e_start="23209" e_stop="23115"/>
            <exon e_start="22970" e_stop="22508"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.953" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.756" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.976" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="26258" e_stop="25929" e_length="330"/>
          </exon>
          <intron i_serial="1" don_prob="0.953" acc_prob="0.983">
            <gDNA_intron_boundary i_start="25928" i_stop="24926" i_length="1003"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="24925" e_stop="24569" e_length="357"/>
          </exon>
          <intron i_serial="2" don_prob="0.756" acc_prob="0.997">
            <gDNA_intron_boundary i_start="24568" i_stop="23809" i_length="760"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="23808" e_stop="23366" e_length="443"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.983">
            <gDNA_intron_boundary i_start="23365" i_stop="23210" i_length="156"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="23209" e_stop="23115" e_length="95"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.976">
            <gDNA_intron_boundary i_start="23114" i_stop="22971" i_length="144"/>
          </intron>
          <exon e_serial="5" e_score="0.996">
            <gDNA_exon_boundary e_start="22970" e_stop="22508" e_length="463"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26258" stop="25929"/>
              <exon start="24925" stop="24569"/>
              <exon start="23808" stop="23366"/>
              <exon start="23209" stop="23115"/>
              <exon start="22970" stop="22508"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U581112" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24811" stop="24584"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590885" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTTGCTTAATTTTCACAAATCATCCAAACATGGCCTTCTCCTCACCGAGCAAAATAGCTCCACCGCTACCGAAGCCTCACCGTTTCTCCTCCTTATCTCAATCGCAAATACCCTTCAAATTCATCAAAATTACGTCATTACCCACTAAACCACCTGCCATAGCTTGTGTCCTCACCGGAAAATCAATGGATGCCACCGCCGTTCAACGACCCGATTCGTTTGGTCGGTTTGGAAAGTTCGGCGGTAAGTATGTACCGGAAACTCTAATGCACGCTCTTGATGAGCTGGAAACCGCCTTCAATTCGCTCGCTACAGACCAGGACTTTCAG : AAGGAACTAGATGGGATATTAAGAGATTATGTTGGCAGAGAGAGCCCTCTTTATTTTGCTGAGCGACTTACTGAGCATTATAAACGTCCAGATGGTGAAGGGCCAATGATCTACCTGAAGAGAGAAGATTTAAACCACACGGGTGCCCACAAAATCAATAATGCTGTTGCGCAAGCTTTGCTTGCCAAGCGCTTGGGAAAGAAACGCATTATTGCCGAGACAGGGGCTGGTCAGCATGGTGTTGCCACTGCAACTGTTTGTGCTCGGTTTGGTTTGGACTGTGTTATTTATATGGGTGCTCAAGATATGGAGAGGCAAGCATTGAATGTCTTCAGAATGCGACTGCTTGGAGCTGAG : GTTAGAGCAGTCCACTCTGGAACTGCTACTCTCAAGGATGCTACTTCAGAAGCTATAAGGGATTGGGTTACAAATGTTGAAACAACTCACTACATACTTGGATCTGTTGCAGGACCACACCCTTACCCCATGATGGTTAGGGAGTTCCATGCAGTGATTGGTAAAGAAACAAGGAAGCAATCATTGGAAAAGTGGGGCGGGAAACCAGACGTGCTTGTTGCATGTGTTGGTGGAGGTTCAAATGCTATGGGACTCTTTCATGAGTTTGTTGATGACAAAGATGTGAGGTTGATTGGGGTTGAAGCAGCAGGTTTTGGTCTAGATAGTAGTAAACATGCCGCCACTTTGACAAAGGGTGAGGTAGGAGTACTGCATGGAGCTATGAGTTATCTACTGCAAGACGAAGATGGGCAGATTGTTGAGCCTCATTCTATCAGTGCCGG : ATTGGATTACCCAGGAGTTGGGCCAGAACACAGCTTTTTGAAAGATCTCGGTAGAGCAGAATATTATAGCATCACAGATGAGGAGGCTTTGGAAG : CCTTCAAAAGGTTATCTCGGTTAGAGGGTATCATCCCCGCTCTGGAAACATCTCATGCTCTCGCCTACTTAGAGAAGCTGTGTCCAACTCTAGCAAATGGAACTAAGGTCGTGCTCAACTGCAGCGGTAGAGGCGATAAAGATGTTCAGACTGCTATTAAATATTTGAAGGTTTGATGGAAAAGTTCGTAACACTTGTCCCAAAGAGTTATCTGTACTTTAAAGGTAACTTTTCTGTTTTATAGCAGAAACGAATTTTGTAAGTTAAATAAAGATGTCTTGTTAGAGCTGTAGATTCATGAACCCAGAACCCAGTTCTATTGATCGTTAATCGGTCCACAAAATTTCACTTTAATCGGTCCTCTGATCGATCAATGTCAAACATGTATCGCTAATTTAGGCATGCTGTTTATTTGAGCCAAATTCTGGGAGGTTTATTAACCAAATGTGTGTTTAAATGAACT</gDNA_template>
            <first_frame> I  C  L  I  F  T  N  H  P  N  M  A  F  S  S  P  S  K  I  A  P  P  L  P  K  P  H  R  F  S  S  L  S  Q  S  Q  I  P  F  K  F  I  K  I  T  S  L  P  T  K  P  P  A  I  A  C  V  L  T  G  K  S  M  D  A  T  A  V  Q  R  P  D  S  F  G  R  F  G  K  F  G  G  K  Y  V  P  E  T  L  M  H  A  L  D  E  L  E  T  A  F  N  S  L  A  T  D  Q  D  F  Q  :  K  E  L  D  G  I  L  R  D  Y  V  G  R  E  S  P  L  Y  F  A  E  R  L  T  E  H  Y  K  R  P  D  G  E  G  P  M  I  Y  L  K  R  E  D  L  N  H  T  G  A  H  K  I  N  N  A  V  A  Q  A  L  L  A  K  R  L  G  K  K  R  I  I  A  E  T  G  A  G  Q  H  G  V  A  T  A  T  V  C  A  R  F  G  L  D  C  V  I  Y  M  G  A  Q  D  M  E  R  Q  A  L  N  V  F  R  M  R  L  L  G  A  E  :  V  R  A  V  H  S  G  T  A  T  L  K  D  A  T  S  E  A  I  R  D  W  V  T  N  V  E  T  T  H  Y  I  L  G  S  V  A  G  P  H  P  Y  P  M  M  V  R  E  F  H  A  V  I  G  K  E  T  R  K  Q  S  L  E  K  W  G  G  K  P  D  V  L  V  A  C  V  G  G  G  S  N  A  M  G  L  F  H  E  F  V  D  D  K  D  V  R  L  I  G  V  E  A  A  G  F  G  L  D  S  S  K  H  A  A  T  L  T  K  G  E  V  G  V  L  H  G  A  M  S  Y  L  L  Q  D  E  D  G  Q  I  V  E  P  H  S  I  S  A  G :   L  D  Y  P  G  V  G  P  E  H  S  F  L  K  D  L  G  R  A  E  Y  Y  S  I  T  D  E  E  A  L  E   : A  F  K  R  L  S  R  L  E  G  I  I  P  A  L  E  T  S  H  A  L  A  Y  L  E  K  L  C  P  T  L  A  N  G  T  K  V  V  L  N  C  S  G  R  G  D  K  D  V  Q  T  A  I  K  Y  L  K  V  *  W  K  S  S  *  H  L  S  Q  R  V  I  C  T  L  K  V  T  F  L  F  Y  S  R  N  E  F  C  K  L  N  K  D  V  L  L  E  L  *  I  H  E  P  R  T  Q  F  Y  *  S  L  I  G  P  Q  N  F  T  L  I  G  P  L  I  D  Q  C  Q  T  C  I  A  N  L  G  M  L  F  I  *  A  K  F  W  E  V  Y  *  P  N  V  C  L  N  E   </first_frame>
            <second_frame>  F  A  *  F  S  Q  I  I  Q  T  W  P  S  P  H  R  A  K  *  L  H  R  Y  R  S  L  T  V  S  P  P  Y  L  N  R  K  Y  P  S  N  S  S  K  L  R  H  Y  P  L  N  H  L  P  *  L  V  S  S  P  E  N  Q  W  M  P  P  P  F  N  D  P  I  R  L  V  G  L  E  S  S  A  V  S  M  Y  R  K  L  *  C  T  L  L  M  S  W  K  P  P  S  I  R  S  L  Q  T  R  T  F  R :   R  N  *  M  G  Y  *  E  I  M  L  A  E  R  A  L  F  I  L  L  S  D  L  L  S  I  I  N  V  Q  M  V  K  G  Q  *  S  T  *  R  E  K  I  *  T  T  R  V  P  T  K  S  I  M  L  L  R  K  L  C  L  P  S  A  W  E  R  N  A  L  L  P  R  Q  G  L  V  S  M  V  L  P  L  Q  L  F  V  L  G  L  V  W  T  V  L  F  I  W  V  L  K  I  W  R  G  K  H  *  M  S  S  E  C  D  C  L  E  L  R :   L  E  Q  S  T  L  E  L  L  L  S  R  M  L  L  Q  K  L  *  G  I  G  L  Q  M  L  K  Q  L  T  T  Y  L  D  L  L  Q  D  H  T  L  T  P  *  W  L  G  S  S  M  Q  *  L  V  K  K  Q  G  S  N  H  W  K  S  G  A  G  N  Q  T  C  L  L  H  V  L  V  E  V  Q  M  L  W  D  S  F  M  S  L  L  M  T  K  M  *  G  *  L  G  L  K  Q  Q  V  L  V  *  I  V  V  N  M  P  P  L  *  Q  R  V  R  *  E  Y  C  M  E  L  *  V  I  Y  C  K  T  K  M  G  R  L  L  S  L  I  L  S  V  P   : D  W  I  T  Q  E  L  G  Q  N  T  A  F  *  K  I  S  V  E  Q  N  I  I  A  S  Q  M  R  R  L  W  K  :  P  S  K  G  Y  L  G  *  R  V  S  S  P  L  W  K  H  L  M  L  S  P  T  *  R  S  C  V  Q  L  *  Q  M  E  L  R  S  C  S  T  A  A  V  E  A  I  K  M  F  R  L  L  L  N  I  *  R  F  D  G  K  V  R  N  T  C  P  K  E  L  S  V  L  *  R  *  L  F  C  F  I  A  E  T  N  F  V  S  *  I  K  M  S  C  *  S  C  R  F  M  N  P  E  P  S  S  I  D  R  *  S  V  H  K  I  S  L  *  S  V  L  *  S  I  N  V  K  H  V  S  L  I  *  A  C  C  L  F  E  P  N  S  G  R  F  I  N  Q  M  C  V  *  M  N  </second_frame>
            <third_frame>   L  L  N  F  H  K  S  S  K  H  G  L  L  L  T  E  Q  N  S  S  T  A  T  E  A  S  P  F  L  L  L  I  S  I  A  N  T  L  Q  I  H  Q  N  Y  V  I  T  H  *  T  T  C  H  S  L  C  P  H  R  K  I  N  G  C  H  R  R  S  T  T  R  F  V  W  S  V  W  K  V  R  R  *  V  C  T  G  N  S  N  A  R  S  *  *  A  G  N  R  L  Q  F  A  R  Y  R  P  G  L  S   : E  G  T  R  W  D  I  K  R  L  C  W  Q  R  E  P  S  L  F  C  *  A  T  Y  *  A  L  *  T  S  R  W  *  R  A  N  D  L  P  E  E  R  R  F  K  P  H  G  C  P  Q  N  Q  *  C  C  C  A  S  F  A  C  Q  A  L  G  K  E  T  H  Y  C  R  D  R  G  W  S  A  W  C  C  H  C  N  C  L  C  S  V  W  F  G  L  C  Y  L  Y  G  C  S  R  Y  G  E  A  S  I  E  C  L  Q  N  A  T  A  W  S  *   : G  *  S  S  P  L  W  N  C  Y  S  Q  G  C  Y  F  R  S  Y  K  G  L  G  Y  K  C  *  N  N  S  L  H  T  W  I  C  C  R  T  T  P  L  P  H  D  G  *  G  V  P  C  S  D  W  *  R  N  K  E  A  I  I  G  K  V  G  R  E  T  R  R  A  C  C  M  C  W  W  R  F  K  C  Y  G  T  L  S  *  V  C  *  *  Q  R  C  E  V  D  W  G  *  S  S  R  F  W  S  R  *  *  *  T  C  R  H  F  D  K  G  *  G  R  S  T  A  W  S  Y  E  L  S  T  A  R  R  R  W  A  D  C  *  A  S  F  Y  Q  C  R  :  I  G  L  P  R  S  W  A  R  T  Q  L  F  E  R  S  R  *  S  R  I  L  *  H  H  R  *  G  G  F  G  S :   L  Q  K  V  I  S  V  R  G  Y  H  P  R  S  G  N  I  S  C  S  R  L  L  R  E  A  V  S  N  S  S  K  W  N  *  G  R  A  Q  L  Q  R  *  R  R  *  R  C  S  D  C  Y  *  I  F  E  G  L  M  E  K  F  V  T  L  V  P  K  S  Y  L  Y  F  K  G  N  F  S  V  L  *  Q  K  R  I  L  *  V  K  *  R  C  L  V  R  A  V  D  S  *  T  Q  N  P  V  L  L  I  V  N  R  S  T  K  F  H  F  N  R  S  S  D  R  S  M  S  N  M  Y  R  *  F  R  H  A  V  Y  L  S  Q  I  L  G  G  L  L  T  K  C  V  F  K  *  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0226J04.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26258" stop="25929"/>
                    <exon start="24925" stop="24569"/>
                    <exon start="23808" stop="23366"/>
                    <exon start="23209" stop="23115"/>
                    <exon start="22970" stop="22795"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1398</number_coding_nucleotides>
                  <number_encoded_amino_acids>466</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ICLIFTNHPNMAFSSPSKIAPPLPKPHRFSSLSQSQIPFKFIKITSLPTKPPAIACVLTGKSMDATAVQRPDSFGRFGKFGGKYVPETLMHALDELETAFNSLATDQDFQKELDGILRDYVGRESPLYFAERLTEHYKRPDGEGPMIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLDCVIYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHAVIGKETRKQSLEKWGGKPDVLVACVGGGSNAMGLFHEFVDDKDVRLIGVEAAGFGLDSSKHAATLTKGEVGVLHGAMSYLLQDEDGQIVEPHSISAGLDYPGVGPEHSFLKDLGRAEYYSITDEEALEAFKRLSRLEGIIPALETSHALAYLEKLCPTLANGTKVVLNCSGRGDKDVQTAIKYLKV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="30629" PGL_stop="28183"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="30629" e_stop="30561"/>
            <exon e_start="29570" e_stop="29450"/>
            <exon e_start="29302" e_stop="29206"/>
            <exon e_start="29099" e_stop="29060"/>
            <exon e_start="28221" e_stop="28183"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.948" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.910" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="30629" e_stop="30561" e_length="69"/>
          </exon>
          <intron i_serial="1" don_prob="0.948" acc_prob="0.998">
            <gDNA_intron_boundary i_start="30560" i_stop="29571" i_length="990"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="29570" e_stop="29450" e_length="121"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.980">
            <gDNA_intron_boundary i_start="29449" i_stop="29303" i_length="147"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="29302" e_stop="29206" e_length="97"/>
          </exon>
          <intron i_serial="3" don_prob="0.992" acc_prob="0.997">
            <gDNA_intron_boundary i_start="29205" i_stop="29100" i_length="106"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="29099" e_stop="29060" e_length="40"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.910">
            <gDNA_intron_boundary i_start="29059" i_stop="28222" i_length="838"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="28221" e_stop="28183" e_length="39"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30629" stop="30561"/>
              <exon start="29570" stop="29450"/>
              <exon start="29302" stop="29206"/>
              <exon start="29099" stop="29060"/>
              <exon start="28221" stop="28183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600243" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GATTCAGATTTAGTTACTTTAAAGATCAGTATTTTTGGTGATTGTCAGATTGGTAAAACAAGTTTTGTG : ATTAAGTATGTAGGTGATGAACAAGAAAAGAGGTGCTTGCAGACGAAGGGATTGAACTTAATGGATAAAACATTAGTTGTACGAGGTGCACGAATTGCATTTAGAATATGGGATGTAGGAG : GTGATCATAGCTCATTTGATCAGATTCCAATAGCTTGTAAAGATTCTGTTGCCATTCTCTTTATGTTCGATCTCACTAGCCGGAGTACATTGAACAA : TGTGATAAGTTGGTATACTGAAGCAAGAAAATGGAATCAG : ACTGCTATTCCAATACTAATTGGGACCAAATTTGATGAT</gDNA_template>
            <first_frame> D  S  D  L  V  T  L  K  I  S  I  F  G  D  C  Q  I  G  K  T  S  F  V  :  I  K  Y  V  G  D  E  Q  E  K  R  C  L  Q  T  K  G  L  N  L  M  D  K  T  L  V  V  R  G  A  R  I  A  F  R  I  W  D  V  G   : G  D  H  S  S  F  D  Q  I  P  I  A  C  K  D  S  V  A  I  L  F  M  F  D  L  T  S  R  S  T  L  N  N :   V  I  S  W  Y  T  E  A  R  K  W  N  Q  :  T  A  I  P  I  L  I  G  T  K  F  D  D </first_frame>
            <second_frame>  I  Q  I  *  L  L  *  R  S  V  F  L  V  I  V  R  L  V  K  Q  V  L  * :   L  S  M  *  V  M  N  K  K  R  G  A  C  R  R  R  D  *  T  *  W  I  K  H  *  L  Y  E  V  H  E  L  H  L  E  Y  G  M  *  E  :  V  I  I  A  H  L  I  R  F  Q  *  L  V  K  I  L  L  P  F  S  L  C  S  I  S  L  A  G  V  H  *  T   : M  *  *  V  G  I  L  K  Q  E  N  G  I  R :   L  L  F  Q  Y  *  L  G  P  N  L  M   </second_frame>
            <third_frame>   F  R  F  S  Y  F  K  D  Q  Y  F  W  *  L  S  D  W  *  N  K  F  C   : D  *  V  C  R  *  *  T  R  K  E  V  L  A  D  E  G  I  E  L  N  G  *  N  I  S  C  T  R  C  T  N  C  I  *  N  M  G  C  R  R :   *  S  *  L  I  *  S  D  S  N  S  L  *  R  F  C  C  H  S  L  Y  V  R  S  H  *  P  E  Y  I  E  Q  :  C  D  K  L  V  Y  *  S  K  K  M  E  S   : D  C  Y  S  N  T  N  W  D  Q  I  *  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0226J04.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="30629" stop="30561"/>
                    <exon start="29570" stop="29450"/>
                    <exon start="29302" stop="29206"/>
                    <exon start="29099" stop="29060"/>
                    <exon start="28221" stop="28183"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>366</number_coding_nucleotides>
                  <number_encoded_amino_acids>122</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DSDLVTLKISIFGDCQIGKTSFVIKYVGDEQEKRCLQTKGLNLMDKTLVVRGARIAFRIWDVGGDHSSFDQIPIACKDSVAILFMFDLTSRSTLNNVISWYTEARKWNQTAIPILIGTKFDD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="52287" PGL_stop="53002"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="52287" e_stop="53002"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="52287" e_stop="53002" e_length="716"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52287" stop="53002"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U568262" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCTAAAAGAGAGACAATACAATCGAATTGGATTCGCCGCCTCGCCGCCGTAAAGAGAAAAATGGTACTGAAGCTATTCGAGGATGACGGTGATGAGCTGGACAAGATTGAGATTAACGAGGAATTCGCCCGCCGGTACGAGCACAACAAGAAAAGAGAAGACTTGCAAAAGCTGGAAGAGTTGAAGAAGAAAGGCATAGTTGATGACTCCGACGCAGGATCCGATGAGGAAGACGATGAAGAAGAAGAGGATCTGGATACTTCAAGTAATTTAAAGTTCTTTGATGGTTTGCTTAAGATTAAAAAAGGTGACCCTGTTTTGAATACTAAAGATGCTAAGTTATTTAATTCTGAATCTGAAACTAATTCTGAGTCGGAGGAGGATGAAGAAAAGGAGAAGAAAGTGAAAAAGAAAAAGCAAAAGCCAATGTATTTGAAGGATGTAGCCTCTAAGCATTTGATTGAGGAGGGTCCCGAATTCGGAGACGAAGAGGAAGAGAACAAAGTGAAGACGTATAACGAGGAGCAAGATGATTTGAGAAACGAGTTCTTAAATGCTGTTAAGGATGAGGAAGAAGAAGAGGGGGACTTGTTTAAGATGAAAGAGGCTGAGAAAGATGAGGAGGAGGGTGACCCTGAGTTTACTAAGAAGTTGGATGAGTTTTTCGGGGAGGATGATAAGCTCGATGAGCAGACGGTGTTTTTAAAGGATTTTTT</gDNA_template>
            <first_frame> P  K  R  E  T  I  Q  S  N  W  I  R  R  L  A  A  V  K  R  K  M  V  L  K  L  F  E  D  D  G  D  E  L  D  K  I  E  I  N  E  E  F  A  R  R  Y  E  H  N  K  K  R  E  D  L  Q  K  L  E  E  L  K  K  K  G  I  V  D  D  S  D  A  G  S  D  E  E  D  D  E  E  E  E  D  L  D  T  S  S  N  L  K  F  F  D  G  L  L  K  I  K  K  G  D  P  V  L  N  T  K  D  A  K  L  F  N  S  E  S  E  T  N  S  E  S  E  E  D  E  E  K  E  K  K  V  K  K  K  K  Q  K  P  M  Y  L  K  D  V  A  S  K  H  L  I  E  E  G  P  E  F  G  D  E  E  E  E  N  K  V  K  T  Y  N  E  E  Q  D  D  L  R  N  E  F  L  N  A  V  K  D  E  E  E  E  E  G  D  L  F  K  M  K  E  A  E  K  D  E  E  E  G  D  P  E  F  T  K  K  L  D  E  F  F  G  E  D  D  K  L  D  E  Q  T  V  F  L  K  D  F   </first_frame>
            <second_frame>  L  K  E  R  Q  Y  N  R  I  G  F  A  A  S  P  P  *  R  E  K  W  Y  *  S  Y  S  R  M  T  V  M  S  W  T  R  L  R  L  T  R  N  S  P  A  G  T  S  T  T  R  K  E  K  T  C  K  S  W  K  S  *  R  R  K  A  *  L  M  T  P  T  Q  D  P  M  R  K  T  M  K  K  K  R  I  W  I  L  Q  V  I  *  S  S  L  M  V  C  L  R  L  K  K  V  T  L  F  *  I  L  K  M  L  S  Y  L  I  L  N  L  K  L  I  L  S  R  R  R  M  K  K  R  R  R  K  *  K  R  K  S  K  S  Q  C  I  *  R  M  *  P  L  S  I  *  L  R  R  V  P  N  S  E  T  K  R  K  R  T  K  *  R  R  I  T  R  S  K  M  I  *  E  T  S  S  *  M  L  L  R  M  R  K  K  K  R  G  T  C  L  R  *  K  R  L  R  K  M  R  R  R  V  T  L  S  L  L  R  S  W  M  S  F  S  G  R  M  I  S  S  M  S  R  R  C  F  *  R  I  F  </second_frame>
            <third_frame>   *  K  R  D  N  T  I  E  L  D  S  P  P  R  R  R  K  E  K  N  G  T  E  A  I  R  G  *  R  *  *  A  G  Q  D  *  D  *  R  G  I  R  P  P  V  R  A  Q  Q  E  K  R  R  L  A  K  A  G  R  V  E  E  E  R  H  S  *  *  L  R  R  R  I  R  *  G  R  R  *  R  R  R  G  S  G  Y  F  K  *  F  K  V  L  *  W  F  A  *  D  *  K  R  *  P  C  F  E  Y  *  R  C  *  V  I  *  F  *  I  *  N  *  F  *  V  G  G  G  *  R  K  G  E  E  S  E  K  E  K  A  K  A  N  V  F  E  G  C  S  L  *  A  F  D  *  G  G  S  R  I  R  R  R  R  G  R  E  Q  S  E  D  V  *  R  G  A  R  *  F  E  K  R  V  L  K  C  C  *  G  *  G  R  R  R  G  G  L  V  *  D  E  R  G  *  E  R  *  G  G  G  *  P  *  V  Y  *  E  V  G  *  V  F  R  G  G  *  *  A  R  *  A  D  G  V  F  K  G  F  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0226J04.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52287" stop="53000"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>714</number_coding_nucleotides>
                  <number_encoded_amino_acids>238</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PKRETIQSNWIRRLAAVKRKMVLKLFEDDGDELDKIEINEEFARRYEHNKKREDLQKLEELKKKGIVDDSDAGSDEEDDEEEEDLDTSSNLKFFDGLLKIKKGDPVLNTKDAKLFNSESETNSESEEDEEKEKKVKKKKQKPMYLKDVASKHLIEEGPEFGDEEEENKVKTYNEEQDDLRNEFLNAVKDEEEEEGDLFKMKEAEKDEEEGDPEFTKKLDEFFGEDDKLDEQTVFLKDF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="53567" PGL_stop="54108"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="53567" e_stop="54108"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="53567" e_stop="54108" e_length="542"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53567" stop="54108"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U597533" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGTGGACGAGCCTCGTGATGGGTTTTTGTCAACTAGGGAAAAACTTCTGAAAGCTATAGAAACTGAAGGTGATCACGAGCAAACAACTGATGACAATAAAGTAAGTGCAGATGACGATGAGGCTGCTGAAGATGGTAAAAGAAAGAAGAAACGGAAGCGAACTAATACAGTTATGAAGGCAGTTAGAGAAGAACTAATGGAGGAGTATTATAAATTGGACTATGAGGATACTATTGGGGATTTGAAGACAAGATTTAAGTATAGGCCTGTCAAAGCTAAAAGATTCGGGCTTGCTCCAGCGGAGGTGCTAATGATGGAGGATACTGAGTTAAATCAGTATGTCCCTTTGAAGAAGATAGCGCCATATAGAGAAAAGGAATGGAAGGTATCCCGTTTGAAATTGTTGCAACTGAAAGATGTATCAAAATCTGACAAGAAGCCAAAGTTTGATAATAAGGAAAAAGTTGAAGCTGAGACCGATGATAGGAAAAGGAAACAAGAAGAATCTGACGGAGACACAATAAAACAATCCAGGCGAAGTA</gDNA_template>
            <first_frame> C  G  R  A  S  *  W  V  F  V  N  *  G  K  T  S  E  S  Y  R  N  *  R  *  S  R  A  N  N  *  *  Q  *  S  K  C  R  *  R  *  G  C  *  R  W  *  K  K  E  E  T  E  A  N  *  Y  S  Y  E  G  S  *  R  R  T  N  G  G  V  L  *  I  G  L  *  G  Y  Y  W  G  F  E  D  K  I  *  V  *  A  C  Q  S  *  K  I  R  A  C  S  S  G  G  A  N  D  G  G  Y  *  V  K  S  V  C  P  F  E  E  D  S  A  I  *  R  K  G  M  E  G  I  P  F  E  I  V  A  T  E  R  C  I  K  I  *  Q  E  A  K  V  *  *  *  G  K  S  *  S  *  D  R  *  *  E  K  E  T  R  R  I  *  R  R  H  N  K  T  I  Q  A  K   </first_frame>
            <second_frame>  V  D  E  P  R  D  G  F  L  S  T  R  E  K  L  L  K  A  I  E  T  E  G  D  H  E  Q  T  T  D  D  N  K  V  S  A  D  D  D  E  A  A  E  D  G  K  R  K  K  K  R  K  R  T  N  T  V  M  K  A  V  R  E  E  L  M  E  E  Y  Y  K  L  D  Y  E  D  T  I  G  D  L  K  T  R  F  K  Y  R  P  V  K  A  K  R  F  G  L  A  P  A  E  V  L  M  M  E  D  T  E  L  N  Q  Y  V  P  L  K  K  I  A  P  Y  R  E  K  E  W  K  V  S  R  L  K  L  L  Q  L  K  D  V  S  K  S  D  K  K  P  K  F  D  N  K  E  K  V  E  A  E  T  D  D  R  K  R  K  Q  E  E  S  D  G  D  T  I  K  Q  S  R  R  S  </second_frame>
            <third_frame>   W  T  S  L  V  M  G  F  C  Q  L  G  K  N  F  *  K  L  *  K  L  K  V  I  T  S  K  Q  L  M  T  I  K  *  V  Q  M  T  M  R  L  L  K  M  V  K  E  R  R  N  G  S  E  L  I  Q  L  *  R  Q  L  E  K  N  *  W  R  S  I  I  N  W  T  M  R  I  L  L  G  I  *  R  Q  D  L  S  I  G  L  S  K  L  K  D  S  G  L  L  Q  R  R  C  *  *  W  R  I  L  S  *  I  S  M  S  L  *  R  R  *  R  H  I  E  K  R  N  G  R  Y  P  V  *  N  C  C  N  *  K  M  Y  Q  N  L  T  R  S  Q  S  L  I  I  R  K  K  L  K  L  R  P  M  I  G  K  G  N  K  K  N  L  T  E  T  Q  *  N  N  P  G  E  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0226J04.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53568" stop="54107"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>540</number_coding_nucleotides>
                  <number_encoded_amino_acids>180</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VDEPRDGFLSTREKLLKAIETEGDHEQTTDDNKVSADDDEAAEDGKRKKKRKRTNTVMKAVREELMEEYYKLDYEDTIGDLKTRFKYRPVKAKRFGLAPAEVLMMEDTELNQYVPLKKIAPYREKEWKVSRLKLLQLKDVSKSDKKPKFDNKEKVEAETDDRKRKQEESDGDTIKQSRRS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="56587" PGL_stop="56788"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="56587" e_stop="56788"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.985"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.985">
            <gDNA_exon_boundary e_start="56587" e_stop="56788" e_length="202"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56587" stop="56788"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U598164" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTCAGAAACAGGACTTAAAAGAGATAAATAGTCTTTTTCTCTTCTTTTTTTTTTCTCCGGTGACCGTCGCCGCACGGTTCACCGTCGACGGGAAAATTAGGGCTAATTTTTGGGAATTTTCAAAAAATGTTCTAATTTTCCAATTGAGAATTTTGATGATAGTGTTCATGAGTATCTGTTGGCATTATTTGAATTCGTTTCG</gDNA_template>
            <first_frame> L  R  N  R  T  *  K  R  *  I  V  F  F  S  S  F  F  F  L  R  *  P  S  P  H  G  S  P  S  T  G  K  L  G  L  I  F  G  N  F  Q  K  M  F  *  F  S  N  *  E  F  *  *  *  C  S  *  V  S  V  G  I  I  *  I  R  F  </first_frame>
            <second_frame>  S  E  T  G  L  K  R  D  K  *  S  F  S  L  L  F  F  F  S  G  D  R  R  R  T  V  H  R  R  R  E  N  *  G  *  F  L  G  I  F  K  K  C  S  N  F  P  I  E  N  F  D  D  S  V  H  E  Y  L  L  A  L  F  E  F  V  S </second_frame>
            <third_frame>   Q  K  Q  D  L  K  E  I  N  S  L  F  L  F  F  F  F  S  P  V  T  V  A  A  R  F  T  V  D  G  K  I  R  A  N  F  W  E  F  S  K  N  V  L  I  F  Q  L  R  I  L  M  I  V  F  M  S  I  C  W  H  Y  L  N  S  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0226J04.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="56589" stop="56786"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QKQDLKEINSLFLFFFFSPVTVAARFTVDGKIRANFWEFSKNVLIFQLRILMIVFMSICWHYLNSF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="58350" PGL_stop="59573"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="58350" e_stop="58355"/>
            <exon e_start="58462" e_stop="58651"/>
            <exon e_start="58965" e_stop="59356"/>
            <exon e_start="59499" e_stop="59573"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.930" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.939" acc_prob="0.967" e_score="0.968"/>
          <exon-intron don_prob="0.999" acc_prob="0.983" e_score="1.000"/>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="58350" e_stop="58355" e_length="6"/>
          </exon>
          <intron i_serial="1" don_prob="0.930" acc_prob="0.998">
            <gDNA_intron_boundary i_start="58356" i_stop="58461" i_length="106"/>
          </intron>
          <exon e_serial="2" e_score="0.968">
            <gDNA_exon_boundary e_start="58462" e_stop="58651" e_length="190"/>
          </exon>
          <intron i_serial="2" don_prob="0.939" acc_prob="0.967">
            <gDNA_intron_boundary i_start="58652" i_stop="58964" i_length="313"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="58965" e_stop="59356" e_length="392"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.983">
            <gDNA_intron_boundary i_start="59357" i_stop="59498" i_length="142"/>
          </intron>
          <exon e_serial="4" e_score="0.987">
            <gDNA_exon_boundary e_start="59499" e_stop="59573" e_length="75"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58350" stop="58355"/>
              <exon start="58462" stop="58651"/>
              <exon start="58965" stop="59356"/>
              <exon start="59499" stop="59573"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U589210" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATATG : GCTGTTGCTGTGAAACAACTTGACAGGAATGGTTTCCAAGGAACGAAAGAGTTCCTTGTGGAGGTCCTGCTGTTGAGTCTTCTCCGTCACTCTAACCTTGTCAATTTGATAGGATACTGTTCAGACGGTGATCAGAGAATATTAGTTTACGAGCTCATGTCAAATGATTCTTTAGAAGTTCATCTTCTTG : AACTTGGTCCAGATCAAAAGCCTCTTGATTGGTATACAAGGATGAAAATTGCAACCGGAGCAGCAAGAGGACTTGCATACTTGCATGAAACGGCTAATCCTCCCGTGATTTATCGGGACTTTAAATCATCCAACATACTTTTAGATGAGAACTTTGATCCCAAGCTTTCTGATTTCGGACTTGCCAAGCTAGGACCAACAGGTGACAGTTCTCATGTGTCCACCAGGGTCATGGGAACTTATGGTTATTGTGCACCTGACTATGCTTGCACAGGTAAATTGACCATTAAGTCCGATGTTTATAGCTTCGGTGTAGTCCTTTTAGAAATAATCTCAGGAAGAAGAGTCATCGACAGCTCCAGACCCAGCGAAGAAAAGAACCTCATCAAGTGG : GCACGACCACTGATCAGCGATAAGAAGTTGCACTTAATAGCAGATCCATTGCTACGAGGGAACTACCCGAGGAGG</gDNA_template>
            <first_frame> N  M  :  A  V  A  V  K  Q  L  D  R  N  G  F  Q  G  T  K  E  F  L  V  E  V  L  L  L  S  L  L  R  H  S  N  L  V  N  L  I  G  Y  C  S  D  G  D  Q  R  I  L  V  Y  E  L  M  S  N  D  S  L  E  V  H  L  L   : E  L  G  P  D  Q  K  P  L  D  W  Y  T  R  M  K  I  A  T  G  A  A  R  G  L  A  Y  L  H  E  T  A  N  P  P  V  I  Y  R  D  F  K  S  S  N  I  L  L  D  E  N  F  D  P  K  L  S  D  F  G  L  A  K  L  G  P  T  G  D  S  S  H  V  S  T  R  V  M  G  T  Y  G  Y  C  A  P  D  Y  A  C  T  G  K  L  T  I  K  S  D  V  Y  S  F  G  V  V  L  L  E  I  I  S  G  R  R  V  I  D  S  S  R  P  S  E  E  K  N  L  I  K  W  :  A  R  P  L  I  S  D  K  K  L  H  L  I  A  D  P  L  L  R  G  N  Y  P  R  R </first_frame>
            <second_frame>  I  W :   L  L  L  *  N  N  L  T  G  M  V  S  K  E  R  K  S  S  L  W  R  S  C  C  *  V  F  S  V  T  L  T  L  S  I  *  *  D  T  V  Q  T  V  I  R  E  Y  *  F  T  S  S  C  Q  M  I  L  *  K  F  I  F  L  :  N  L  V  Q  I  K  S  L  L  I  G  I  Q  G  *  K  L  Q  P  E  Q  Q  E  D  L  H  T  C  M  K  R  L  I  L  P  *  F  I  G  T  L  N  H  P  T  Y  F  *  M  R  T  L  I  P  S  F  L  I  S  D  L  P  S  *  D  Q  Q  V  T  V  L  M  C  P  P  G  S  W  E  L  M  V  I  V  H  L  T  M  L  A  Q  V  N  *  P  L  S  P  M  F  I  A  S  V  *  S  F  *  K  *  S  Q  E  E  E  S  S  T  A  P  D  P  A  K  K  R  T  S  S  S  G :   H  D  H  *  S  A  I  R  S  C  T  *  *  Q  I  H  C  Y  E  G  T  T  R  G   </second_frame>
            <third_frame>   Y   : G  C  C  C  E  T  T  *  Q  E  W  F  P  R  N  E  R  V  P  C  G  G  P  A  V  E  S  S  P  S  L  *  P  C  Q  F  D  R  I  L  F  R  R  *  S  E  N  I  S  L  R  A  H  V  K  *  F  F  R  S  S  S  S  * :   T  W  S  R  S  K  A  S  *  L  V  Y  K  D  E  N  C  N  R  S  S  K  R  T  C  I  L  A  *  N  G  *  S  S  R  D  L  S  G  L  *  I  I  Q  H  T  F  R  *  E  L  *  S  Q  A  F  *  F  R  T  C  Q  A  R  T  N  R  *  Q  F  S  C  V  H  Q  G  H  G  N  L  W  L  L  C  T  *  L  C  L  H  R  *  I  D  H  *  V  R  C  L  *  L  R  C  S  P  F  R  N  N  L  R  K  K  S  H  R  Q  L  Q  T  Q  R  R  K  E  P  H  Q  V   : G  T  T  T  D  Q  R  *  E  V  A  L  N  S  R  S  I  A  T  R  E  L  P  E  E  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0226J04.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="58350" stop="58355"/>
                    <exon start="58462" stop="58651"/>
                    <exon start="58965" stop="59356"/>
                    <exon start="59499" stop="59573"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>663</number_coding_nucleotides>
                  <number_encoded_amino_acids>221</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NMAVAVKQLDRNGFQGTKEFLVEVLLLSLLRHSNLVNLIGYCSDGDQRILVYELMSNDSLEVHLLELGPDQKPLDWYTRMKIATGAARGLAYLHETANPPVIYRDFKSSNILLDENFDPKLSDFGLAKLGPTGDSSHVSTRVMGTYGYCAPDYACTGKLTIKSDVYSFGVVLLEIISGRRVIDSSRPSEEKNLIKWARPLISDKKLHLIADPLLRGNYPRR</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="68181" PGL_stop="69789"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="68181" e_stop="68186"/>
            <exon e_start="68266" e_stop="68460"/>
            <exon e_start="68650" e_stop="68742"/>
            <exon e_start="68871" e_stop="69083"/>
            <exon e_start="69236" e_stop="69325"/>
            <exon e_start="69742" e_stop="69789"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.416" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.495" e_score="1.000"/>
          <exon-intron don_prob="0.702" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.958"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="68181" e_stop="68186" e_length="6"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.416">
            <gDNA_intron_boundary i_start="68187" i_stop="68265" i_length="79"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="68266" e_stop="68460" e_length="195"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.992">
            <gDNA_intron_boundary i_start="68461" i_stop="68649" i_length="189"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="68650" e_stop="68742" e_length="93"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.995">
            <gDNA_intron_boundary i_start="68743" i_stop="68870" i_length="128"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="68871" e_stop="69083" e_length="213"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.495">
            <gDNA_intron_boundary i_start="69084" i_stop="69235" i_length="152"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="69236" e_stop="69325" e_length="90"/>
          </exon>
          <intron i_serial="5" don_prob="0.702" acc_prob="1.000">
            <gDNA_intron_boundary i_start="69326" i_stop="69741" i_length="416"/>
          </intron>
          <exon e_serial="6" e_score="0.958">
            <gDNA_exon_boundary e_start="69742" e_stop="69789" e_length="48"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68181" stop="68186"/>
              <exon start="68266" stop="68460"/>
              <exon start="68650" stop="68742"/>
              <exon start="68871" stop="69083"/>
              <exon start="69236" stop="69325"/>
              <exon start="69742" stop="69789"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U598177" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGGCAG : TTGGAACTTAGGATTCTTGCACATCTTGCCAACTGTAAGAGCATGTTGGGTGCATTCGAAGCTGGTGGAGACTTCCATTCAAGGACTGCCATGAATATGTATCCTCACATCCGTGAAGCTGTTGAAAAGGGGCAGGTACTTCTTGAGTGGCATCCTCAACCTGGTGAAGACAAACCACCAGTTCCTCTGCTAAAG : GATGCTTTTGGCTCTGAAAGAAGGAAAGCAAAGATGCTCAATTTTTCAATTGCGTACGGAAAAACTACAATTGGACTCTCTCGCGATTGGAAG : GTATCTGTAAAGGAAGCAAAGGAAACAGTTGAACGTTGGTATAGTGATAGAAAAGAAGTGTCAGATTGGCAAGAACAACGCAGATTTGAAGCACGTGAGTTCGGATGTGTTCACACACTTCTAGGACGAGCACGTTGGTTTCCGTCAGTAAAAAATGCAACCGGATCCGTTAAAGGTCACATAGAACGAGCTGCTATCAATACTCCAGTGCAG : GGAAGTGCTGCAGATGTCGCTATGTGCGCGATGTTAGAGATATCAAAGAATGCACGACTAAAGGAGCTTGGATGGAAATTGCTTTTACAG : GTTCATGATGAAGTTATTTTGGAAGGACCAGAAGAATCTGAGGAAGAA</gDNA_template>
            <first_frame> G  Q  :  L  E  L  R  I  L  A  H  L  A  N  C  K  S  M  L  G  A  F  E  A  G  G  D  F  H  S  R  T  A  M  N  M  Y  P  H  I  R  E  A  V  E  K  G  Q  V  L  L  E  W  H  P  Q  P  G  E  D  K  P  P  V  P  L  L  K  :  D  A  F  G  S  E  R  R  K  A  K  M  L  N  F  S  I  A  Y  G  K  T  T  I  G  L  S  R  D  W  K  :  V  S  V  K  E  A  K  E  T  V  E  R  W  Y  S  D  R  K  E  V  S  D  W  Q  E  Q  R  R  F  E  A  R  E  F  G  C  V  H  T  L  L  G  R  A  R  W  F  P  S  V  K  N  A  T  G  S  V  K  G  H  I  E  R  A  A  I  N  T  P  V  Q  :  G  S  A  A  D  V  A  M  C  A  M  L  E  I  S  K  N  A  R  L  K  E  L  G  W  K  L  L  L  Q  :  V  H  D  E  V  I  L  E  G  P  E  E  S  E  E  E </first_frame>
            <second_frame>  G  S :   W  N  L  G  F  L  H  I  L  P  T  V  R  A  C  W  V  H  S  K  L  V  E  T  S  I  Q  G  L  P  *  I  C  I  L  T  S  V  K  L  L  K  R  G  R  Y  F  L  S  G  I  L  N  L  V  K  T  N  H  Q  F  L  C  *  R :   M  L  L  A  L  K  E  G  K  Q  R  C  S  I  F  Q  L  R  T  E  K  L  Q  L  D  S  L  A  I  G  R :   Y  L  *  R  K  Q  R  K  Q  L  N  V  G  I  V  I  E  K  K  C  Q  I  G  K  N  N  A  D  L  K  H  V  S  S  D  V  F  T  H  F  *  D  E  H  V  G  F  R  Q  *  K  M  Q  P  D  P  L  K  V  T  *  N  E  L  L  S  I  L  Q  C  R :   E  V  L  Q  M  S  L  C  A  R  C  *  R  Y  Q  R  M  H  D  *  R  S  L  D  G  N  C  F  Y  R :   F  M  M  K  L  F  W  K  D  Q  K  N  L  R  K   </second_frame>
            <third_frame>   A   : V  G  T  *  D  S  C  T  S  C  Q  L  *  E  H  V  G  C  I  R  S  W  W  R  L  P  F  K  D  C  H  E  Y  V  S  S  H  P  *  S  C  *  K  G  A  G  T  S  *  V  A  S  S  T  W  *  R  Q  T  T  S  S  S  A  K   : G  C  F  W  L  *  K  K  E  S  K  D  A  Q  F  F  N  C  V  R  K  N  Y  N  W  T  L  S  R  L  E   : G  I  C  K  G  S  K  G  N  S  *  T  L  V  *  *  *  K  R  S  V  R  L  A  R  T  T  Q  I  *  S  T  *  V  R  M  C  S  H  T  S  R  T  S  T  L  V  S  V  S  K  K  C  N  R  I  R  *  R  S  H  R  T  S  C  Y  Q  Y  S  S  A   : G  K  C  C  R  C  R  Y  V  R  D  V  R  D  I  K  E  C  T  T  K  G  A  W  M  E  I  A  F  T   : G  S  *  *  S  Y  F  G  R  T  R  R  I  *  G  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0226J04.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68181" stop="68186"/>
                    <exon start="68266" stop="68460"/>
                    <exon start="68650" stop="68742"/>
                    <exon start="68871" stop="69083"/>
                    <exon start="69236" stop="69325"/>
                    <exon start="69742" stop="69789"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>645</number_coding_nucleotides>
                  <number_encoded_amino_acids>215</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GQLELRILAHLANCKSMLGAFEAGGDFHSRTAMNMYPHIREAVEKGQVLLEWHPQPGEDKPPVPLLKDAFGSERRKAKMLNFSIAYGKTTIGLSRDWKVSVKEAKETVERWYSDRKEVSDWQEQRRFEAREFGCVHTLLGRARWFPSVKNATGSVKGHIERAAINTPVQGSAADVAMCAMLEISKNARLKELGWKLLLQVHDEVILEGPEESEEE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="74171" PGL_stop="77399"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="74171" e_stop="74424"/>
            <exon e_start="75923" e_stop="77399"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.911" e_score="0.969"/>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.969">
            <gDNA_exon_boundary e_start="74171" e_stop="74424" e_length="254"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.911">
            <gDNA_intron_boundary i_start="74425" i_stop="75922" i_length="1498"/>
          </intron>
          <exon e_serial="2" e_score="0.999">
            <gDNA_exon_boundary e_start="75923" e_stop="77399" e_length="1477"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74171" stop="74424"/>
              <exon start="75923" stop="77399"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U571702" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAAGAGAATAAGTTATATATATTTTTTTTTAAAATCAAAAAGAAGAGAAAATCTACAGTGAACCCTTATATAAAAGCTTCCAATTTGCACCCTAGAGTGAAAAAGATTGCAGCTTTTGCATCCAAATAGTGAAAATTGAGGTATATTTGAAGTGGGGTTTGAGTAGAAAAGGATAAAGAGAGATTTATCAGGCAGCAAAGGCTTTGCCGCCGGTGAAAGAATTTCGTAAAACGAATAGCTAAGCAGTTATCAG : AACTCTCCACTTGAAGTTTGCTGCTTCCCGAGCTACTTTTTTTATTGATACTCAGAAAGACATCATGGCTGTTTGTGGTTCAAGGACTCATATTGGGCATTTCGTTGGCAATATGACTGCTAGGCGCCTGCAGTGTAGTTTGTCAGTAAAGGGTTGTACTGTTTCTTACAACAAAAGAGGCTTACAAAATGTTAGTAAAGCTAACATCAATTTGGGAAACAAAGGACGGCCCAACAACTTCATGCTTTACCAATATTTGACGACTAATGTTGCAAAGAGGAGGACTAACCTCAATCCACACAAAGGCTTTGGATTGGAAGGTTTTCGCAATTTATCCCACGAATGTTTCTATTCTGGAACTGCCTCTGCTTCTAATGTGTCTTCTGATAATTCTAAGGGCACGGAACAAGTTGTTGACGTTGTTAATTCTTCTGAAGCACAGATCCCCTTGCAGCTAAACTCGGGATCTTTTTACCTACCTCATCCTGCTAAAGCAAAAACTGGTGGAGAGGATGCTCATTTTATTTGTACCCTTACGCCAGCAATCGGTGTAGCTGATGGTGTTGGTGGATGGGCTGATCTTGGTATTGATGCTGGACTATATGCCCGTGAATTGATGTCTCACTCTTTATCTGCAATTCAAGATGAACCAAAAGGTTCTGTAGACCTAATCAGAGTGCTGGAGAAAGCTTACGTGAGAACAAAAGCAAAAGGCTCTTGTACAGCGTGTATCGTTGCACTCACTGAAGGGGGTCTTTATGCAGTTAATTTAGGAGATAGCGGATTTATGTTGGTTAGAAATGGATGTGCTGCATTTAAATCCCCTTCACAGCAGCATGGGTTTAATTTCCCATATCAACTAGATTGCAACAACGCAGGTGATTCACCTAGCTCTGCCATGGTATTCAAAATTACTGCTTTACCTGGAGATGTCCTAATTGTTGGTACAGATGGGCTTTTTGATAATTTGTATGACGAAGATATCAGTGGAGTTGTATTTCAGGCCATGGAAGATGGCTTAGCGCCTCAGATGACTGCTCAGCGGATAGCAGAACTGGCACAACTAAGAGCAATGGATCATATCAAGTCTTCGCCTTTCTCTGATGGAGCTCGCGAGGCTGGATTTGATTACCATGGTGGGAAGCTGGACGACATCACCGTAGTTGTTTCTTACATAACAGAGTAAAATTGAAAATCCACACCATGTCACAATATTCAGTGATACTATTGGAACAGAATCAAAAGCTGAAGGAGAGTCATACAATACAGCAACTTTGATTTGTTTCTAAAACAAAGACACACAAATCAAAGACAAGAATGAGAAGGCTTCAGCAGCATCTTGGGTCTAGCTCAGTTCACCTCAGTTTGATACAAGTGTTTTACTTTATGAAATTCAAATAGCATGTTGGGATCATTAACATTTATTTGATGGAGGATTTTCTTCTGTATTTTTGTTTACTTAGTAGATACCATCAGG</gDNA_template>
            <first_frame> K  R  E  *  V  I  Y  I  F  F  *  N  Q  K  E  E  K  I  Y  S  E  P  L  Y  K  S  F  Q  F  A  P  *  S  E  K  D  C  S  F  C  I  Q  I  V  K  I  E  V  Y  L  K  W  G  L  S  R  K  G  *  R  E  I  Y  Q  A  A  K  A  L  P  P  V  K  E  F  R  K  T  N  S  *  A  V  I  R :   T  L  H  L  K  F  A  A  S  R  A  T  F  F  I  D  T  Q  K  D  I  M  A  V  C  G  S  R  T  H  I  G  H  F  V  G  N  M  T  A  R  R  L  Q  C  S  L  S  V  K  G  C  T  V  S  Y  N  K  R  G  L  Q  N  V  S  K  A  N  I  N  L  G  N  K  G  R  P  N  N  F  M  L  Y  Q  Y  L  T  T  N  V  A  K  R  R  T  N  L  N  P  H  K  G  F  G  L  E  G  F  R  N  L  S  H  E  C  F  Y  S  G  T  A  S  A  S  N  V  S  S  D  N  S  K  G  T  E  Q  V  V  D  V  V  N  S  S  E  A  Q  I  P  L  Q  L  N  S  G  S  F  Y  L  P  H  P  A  K  A  K  T  G  G  E  D  A  H  F  I  C  T  L  T  P  A  I  G  V  A  D  G  V  G  G  W  A  D  L  G  I  D  A  G  L  Y  A  R  E  L  M  S  H  S  L  S  A  I  Q  D  E  P  K  G  S  V  D  L  I  R  V  L  E  K  A  Y  V  R  T  K  A  K  G  S  C  T  A  C  I  V  A  L  T  E  G  G  L  Y  A  V  N  L  G  D  S  G  F  M  L  V  R  N  G  C  A  A  F  K  S  P  S  Q  Q  H  G  F  N  F  P  Y  Q  L  D  C  N  N  A  G  D  S  P  S  S  A  M  V  F  K  I  T  A  L  P  G  D  V  L  I  V  G  T  D  G  L  F  D  N  L  Y  D  E  D  I  S  G  V  V  F  Q  A  M  E  D  G  L  A  P  Q  M  T  A  Q  R  I  A  E  L  A  Q  L  R  A  M  D  H  I  K  S  S  P  F  S  D  G  A  R  E  A  G  F  D  Y  H  G  G  K  L  D  D  I  T  V  V  V  S  Y  I  T  E  *  N  *  K  S  T  P  C  H  N  I  Q  *  Y  Y  W  N  R  I  K  S  *  R  R  V  I  Q  Y  S  N  F  D  L  F  L  K  Q  R  H  T  N  Q  R  Q  E  *  E  G  F  S  S  I  L  G  L  A  Q  F  T  S  V  *  Y  K  C  F  T  L  *  N  S  N  S  M  L  G  S  L  T  F  I  *  W  R  I  F  F  C  I  F  V  Y  L  V  D  T  I  R </first_frame>
            <second_frame>  K  E  N  K  L  Y  I  F  F  F  K  I  K  K  K  R  K  S  T  V  N  P  Y  I  K  A  S  N  L  H  P  R  V  K  K  I  A  A  F  A  S  K  *  *  K  L  R  Y  I  *  S  G  V  *  V  E  K  D  K  E  R  F  I  R  Q  Q  R  L  C  R  R  *  K  N  F  V  K  R  I  A  K  Q  L  S   : E  L  S  T  *  S  L  L  L  P  E  L  L  F  L  L  I  L  R  K  T  S  W  L  F  V  V  Q  G  L  I  L  G  I  S  L  A  I  *  L  L  G  A  C  S  V  V  C  Q  *  R  V  V  L  F  L  T  T  K  E  A  Y  K  M  L  V  K  L  T  S  I  W  E  T  K  D  G  P  T  T  S  C  F  T  N  I  *  R  L  M  L  Q  R  G  G  L  T  S  I  H  T  K  A  L  D  W  K  V  F  A  I  Y  P  T  N  V  S  I  L  E  L  P  L  L  L  M  C  L  L  I  I  L  R  A  R  N  K  L  L  T  L  L  I  L  L  K  H  R  S  P  C  S  *  T  R  D  L  F  T  Y  L  I  L  L  K  Q  K  L  V  E  R  M  L  I  L  F  V  P  L  R  Q  Q  S  V  *  L  M  V  L  V  D  G  L  I  L  V  L  M  L  D  Y  M  P  V  N  *  C  L  T  L  Y  L  Q  F  K  M  N  Q  K  V  L  *  T  *  S  E  C  W  R  K  L  T  *  E  Q  K  Q  K  A  L  V  Q  R  V  S  L  H  S  L  K  G  V  F  M  Q  L  I  *  E  I  A  D  L  C  W  L  E  M  D  V  L  H  L  N  P  L  H  S  S  M  G  L  I  S  H  I  N  *  I  A  T  T  Q  V  I  H  L  A  L  P  W  Y  S  K  L  L  L  Y  L  E  M  S  *  L  L  V  Q  M  G  F  L  I  I  C  M  T  K  I  S  V  E  L  Y  F  R  P  W  K  M  A  *  R  L  R  *  L  L  S  G  *  Q  N  W  H  N  *  E  Q  W  I  I  S  S  L  R  L  S  L  M  E  L  A  R  L  D  L  I  T  M  V  G  S  W  T  T  S  P  *  L  F  L  T  *  Q  S  K  I  E  N  P  H  H  V  T  I  F  S  D  T  I  G  T  E  S  K  A  E  G  E  S  Y  N  T  A  T  L  I  C  F  *  N  K  D  T  Q  I  K  D  K  N  E  K  A  S  A  A  S  W  V  *  L  S  S  P  Q  F  D  T  S  V  L  L  Y  E  I  Q  I  A  C  W  D  H  *  H  L  F  D  G  G  F  S  S  V  F  L  F  T  *  *  I  P  S   </second_frame>
            <third_frame>   K  R  I  S  Y  I  Y  F  F  L  K  S  K  R  R  E  N  L  Q  *  T  L  I  *  K  L  P  I  C  T  L  E  *  K  R  L  Q  L  L  H  P  N  S  E  N  *  G  I  F  E  V  G  F  E  *  K  R  I  K  R  D  L  S  G  S  K  G  F  A  A  G  E  R  I  S  *  N  E  *  L  S  S  Y  Q  :  N  S  P  L  E  V  C  C  F  P  S  Y  F  F  Y  *  Y  S  E  R  H  H  G  C  L  W  F  K  D  S  Y  W  A  F  R  W  Q  Y  D  C  *  A  P  A  V  *  F  V  S  K  G  L  Y  C  F  L  Q  Q  K  R  L  T  K  C  *  *  S  *  H  Q  F  G  K  Q  R  T  A  Q  Q  L  H  A  L  P  I  F  D  D  *  C  C  K  E  E  D  *  P  Q  S  T  Q  R  L  W  I  G  R  F  S  Q  F  I  P  R  M  F  L  F  W  N  C  L  C  F  *  C  V  F  *  *  F  *  G  H  G  T  S  C  *  R  C  *  F  F  *  S  T  D  P  L  A  A  K  L  G  I  F  L  P  T  S  S  C  *  S  K  N  W  W  R  G  C  S  F  Y  L  Y  P  Y  A  S  N  R  C  S  *  W  C  W  W  M  G  *  S  W  Y  *  C  W  T  I  C  P  *  I  D  V  S  L  F  I  C  N  S  R  *  T  K  R  F  C  R  P  N  Q  S  A  G  E  S  L  R  E  N  K  S  K  R  L  L  Y  S  V  Y  R  C  T  H  *  R  G  S  L  C  S  *  F  R  R  *  R  I  Y  V  G  *  K  W  M  C  C  I  *  I  P  F  T  A  A  W  V  *  F  P  I  S  T  R  L  Q  Q  R  R  *  F  T  *  L  C  H  G  I  Q  N  Y  C  F  T  W  R  C  P  N  C  W  Y  R  W  A  F  *  *  F  V  *  R  R  Y  Q  W  S  C  I  S  G  H  G  R  W  L  S  A  S  D  D  C  S  A  D  S  R  T  G  T  T  K  S  N  G  S  Y  Q  V  F  A  F  L  *  W  S  S  R  G  W  I  *  L  P  W  W  E  A  G  R  H  H  R  S  C  F  L  H  N  R  V  K  L  K  I  H  T  M  S  Q  Y  S  V  I  L  L  E  Q  N  Q  K  L  K  E  S  H  T  I  Q  Q  L  *  F  V  S  K  T  K  T  H  K  S  K  T  R  M  R  R  L  Q  Q  H  L  G  S  S  S  V  H  L  S  L  I  Q  V  F  Y  F  M  K  F  K  *  H  V  G  I  I  N  I  Y  L  M  E  D  F  L  L  Y  F  C  L  L  S  R  Y  H  Q  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0226J04.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="74414" stop="74424"/>
                    <exon start="75923" stop="77108"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1194</number_coding_nucleotides>
                  <number_encoded_amino_acids>398</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AVIRTLHLKFAASRATFFIDTQKDIMAVCGSRTHIGHFVGNMTARRLQCSLSVKGCTVSYNKRGLQNVSKANINLGNKGRPNNFMLYQYLTTNVAKRRTNLNPHKGFGLEGFRNLSHECFYSGTASASNVSSDNSKGTEQVVDVVNSSEAQIPLQLNSGSFYLPHPAKAKTGGEDAHFICTLTPAIGVADGVGGWADLGIDAGLYARELMSHSLSAIQDEPKGSVDLIRVLEKAYVRTKAKGSCTACIVALTEGGLYAVNLGDSGFMLVRNGCAAFKSPSQQHGFNFPYQLDCNNAGDSPSSAMVFKITALPGDVLIVGTDGLFDNLYDEDISGVVFQAMEDGLAPQMTAQRIAELAQLRAMDHIKSSPFSDGAREAGFDYHGGKLDDITVVVSYITE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="82451" PGL_stop="77640"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="82451" e_stop="82390"/>
            <exon e_start="82339" e_stop="82169"/>
            <exon e_start="81411" e_stop="81299"/>
            <exon e_start="80684" e_stop="80606"/>
            <exon e_start="80032" e_stop="80004"/>
            <exon e_start="79509" e_stop="79416"/>
            <exon e_start="79022" e_stop="78933"/>
            <exon e_start="78688" e_stop="78499"/>
            <exon e_start="78064" e_stop="77640"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.000" e_score="0.984"/>
          <exon-intron don_prob="0.750" acc_prob="0.999" e_score="0.977"/>
          <exon-intron don_prob="0.997" acc_prob="0.968" e_score="0.991"/>
          <exon-intron don_prob="0.972" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.539" e_score="1.000"/>
          <exon-intron don_prob="0.714" acc_prob="0.858" e_score="1.000"/>
          <exon-intron don_prob="0.967" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.984">
            <gDNA_exon_boundary e_start="82451" e_stop="82390" e_length="62"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.000">
            <gDNA_intron_boundary i_start="82389" i_stop="82340" i_length="50"/>
          </intron>
          <exon e_serial="2" e_score="0.977">
            <gDNA_exon_boundary e_start="82339" e_stop="82169" e_length="171"/>
          </exon>
          <intron i_serial="2" don_prob="0.750" acc_prob="0.999">
            <gDNA_intron_boundary i_start="82168" i_stop="81412" i_length="757"/>
          </intron>
          <exon e_serial="3" e_score="0.991">
            <gDNA_exon_boundary e_start="81411" e_stop="81299" e_length="113"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.968">
            <gDNA_intron_boundary i_start="81298" i_stop="80685" i_length="614"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="80684" e_stop="80606" e_length="79"/>
          </exon>
          <intron i_serial="4" don_prob="0.972" acc_prob="0.996">
            <gDNA_intron_boundary i_start="80605" i_stop="80033" i_length="573"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="80032" e_stop="80004" e_length="29"/>
          </exon>
          <intron i_serial="5" don_prob="0.990" acc_prob="0.000">
            <gDNA_intron_boundary i_start="80003" i_stop="79510" i_length="494"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="79509" e_stop="79416" e_length="94"/>
          </exon>
          <intron i_serial="6" don_prob="0.993" acc_prob="0.539">
            <gDNA_intron_boundary i_start="79415" i_stop="79023" i_length="393"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="79022" e_stop="78933" e_length="90"/>
          </exon>
          <intron i_serial="7" don_prob="0.714" acc_prob="0.858">
            <gDNA_intron_boundary i_start="78932" i_stop="78689" i_length="244"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="78688" e_stop="78499" e_length="190"/>
          </exon>
          <intron i_serial="8" don_prob="0.967" acc_prob="0.999">
            <gDNA_intron_boundary i_start="78498" i_stop="78065" i_length="434"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="78064" e_stop="77640" e_length="425"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82451" stop="82390"/>
              <exon start="82339" stop="82169"/>
              <exon start="81411" stop="81299"/>
              <exon start="80684" stop="80606"/>
              <exon start="80032" stop="80004"/>
              <exon start="79509" stop="79416"/>
              <exon start="79022" stop="78933"/>
              <exon start="78688" stop="78499"/>
              <exon start="78064" stop="77640"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U564639" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTGCTCCGCCGCTCGGAGCACACTAGTCGCCGATCGCCGCCCGTCGCCCGCCGCCGCCGCC : TAGTTTTTCTTTGTTACAGCTGAAATTATGGGCTCAGAGATGGAGATAGTCGAGCAAAGGCTAAACACTTTTGTAAGTCAGCTGCAGACAGAGTTTGCCATTCTCGATCGTCTCGTTTACAAAAATAAAAACCAGCATAGAAGATGCTCATATTTTCAGTACCTCTTAAAG : GTGCGAAGAGATGTGAGGCTCCTCCAAACAACTAACTTGGAGGAGGTTTTGAGTGACTCCTTTCAAGTTCTTAACGGAAAAAGACCCAAGCAAAAAGTGCAGCTTCTGGAAAG : CCTAAAGAGGAGAAGATCTAATGGTGGCAAATATAACTTTCTGGAGCGGCTTTTAGGGGTTGCGCATCTGTTGTCACAG : ATGGTTGAGCCAGTTTTAAGGGCCGCGTC : GGAGATATCCACACTTCTTGCACGATCATTTTTTATGGGATTTTCGCTGACAGTATTGTCCTTGCTTGCCCGAATAAGAGTTCTAGTTCAGCAA : ATTCTTCTAGATGTTGTTTGTGTATTCAACAATGTTTCCTCTTTATCACAGAGGGAACAAGCCATCAAATTGACTCAAGATGGTTTTGAG : GTTTTTAGAGAATATTTTCCGCCAAAGCAGCAGGTGGTCTTCCTCGAATGTATTTGGGAATCTGATAAGTATATGTTAGTTGAGAGACAAAATCAGAAAGATGTTGGAAGCCAGGAAAAGGATGTTGGAGAAGATGTTTCTGTAGAAGCATCTAAGGTTCAGTATGAAAGCATTGGGCTTTTCCTAGGAG : ATGATGAACCTGGACAGACGGCCTCTAAAGATTCAGCTGAGGATGGTCAAACTATGAAGGACAACGATATAGTAGATTCCTTGGAGGATCCTATCCAAGATAGTAATGATGAATCTCAAGCTCAAGTTGATTCAACTATTGCAGAACCTTCTGGAAATAATTTTGATGCTCCTGAAGCCGGAGCACTTCCAAGTTCATCACGAGACAAGAATCCTTCAAAAGCCAAACATGGATCAAGAAATAGCGTTGCATTTGTTTCAGTAAAAAGACCCAAACTGTCAACAAACAATGAGTTGGGGTTTGACATTCATAGAACAGAAAAGGTTGATAATCCTGGTGTAGATAAAGAAGATCCATTTTTCAGTTTACTTTTTAGTGGAAATGTGAAGAGCAGTCTATTCTGAACTTCACCTAAATAGTTTTTC</gDNA_template>
            <first_frame> I  A  P  P  L  G  A  H  *  S  P  I  A  A  R  R  P  P  P  P  P :   S  F  S  L  L  Q  L  K  L  W  A  Q  R  W  R  *  S  S  K  G  *  T  L  L  *  V  S  C  R  Q  S  L  P  F  S  I  V  S  F  T  K  I  K  T  S  I  E  D  A  H  I  F  S  T  S  *  R :   C  E  E  M  *  G  S  S  K  Q  L  T  W  R  R  F  *  V  T  P  F  K  F  L  T  E  K  D  P  S  K  K  C  S  F  W  K   : A  *  R  G  E  D  L  M  V  A  N  I  T  F  W  S  G  F  *  G  L  R  I  C  C  H  R :   W  L  S  Q  F  *  G  P  R   : R  R  Y  P  H  F  L  H  D  H  F  L  W  D  F  R  *  Q  Y  C  P  C  L  P  E  *  E  F  *  F  S  K :   F  F  *  M  L  F  V  Y  S  T  M  F  P  L  Y  H  R  G  N  K  P  S  N  *  L  K  M  V  L  R :   F  L  E  N  I  F  R  Q  S  S  R  W  S  S  S  N  V  F  G  N  L  I  S  I  C  *  L  R  D  K  I  R  K  M  L  E  A  R  K  R  M  L  E  K  M  F  L  *  K  H  L  R  F  S  M  K  A  L  G  F  S  *  E  :  M  M  N  L  D  R  R  P  L  K  I  Q  L  R  M  V  K  L  *  R  T  T  I  *  *  I  P  W  R  I  L  S  K  I  V  M  M  N  L  K  L  K  L  I  Q  L  L  Q  N  L  L  E  I  I  L  M  L  L  K  P  E  H  F  Q  V  H  H  E  T  R  I  L  Q  K  P  N  M  D  Q  E  I  A  L  H  L  F  Q  *  K  D  P  N  C  Q  Q  T  M  S  W  G  L  T  F  I  E  Q  K  R  L  I  I  L  V  *  I  K  K  I  H  F  S  V  Y  F  L  V  E  M  *  R  A  V  Y  S  E  L  H  L  N  S  F   </first_frame>
            <second_frame>  L  L  R  R  S  E  H  T  S  R  R  S  P  P  V  A  R  R  R  R   : L  V  F  L  C  Y  S  *  N  Y  G  L  R  D  G  D  S  R  A  K  A  K  H  F  C  K  S  A  A  D  R  V  C  H  S  R  S  S  R  L  Q  K  *  K  P  A  *  K  M  L  I  F  S  V  P  L  K   : G  A  K  R  C  E  A  P  P  N  N  *  L  G  G  G  F  E  *  L  L  S  S  S  *  R  K  K  T  Q  A  K  S  A  A  S  G  K  :  P  K  E  E  K  I  *  W  W  Q  I  *  L  S  G  A  A  F  R  G  C  A  S  V  V  T   : D  G  *  A  S  F  K  G  R  V  :  G  D  I  H  T  S  C  T  I  I  F  Y  G  I  F  A  D  S  I  V  L  A  C  P  N  K  S  S  S  S  A   : N  S  S  R  C  C  L  C  I  Q  Q  C  F  L  F  I  T  E  G  T  S  H  Q  I  D  S  R  W  F  *   : G  F  *  R  I  F  S  A  K  A  A  G  G  L  P  R  M  Y  L  G  I  *  *  V  Y  V  S  *  E  T  K  S  E  R  C  W  K  P  G  K  G  C  W  R  R  C  F  C  R  S  I  *  G  S  V  *  K  H  W  A  F  P  R  R :   *  *  T  W  T  D  G  L  *  R  F  S  *  G  W  S  N  Y  E  G  Q  R  Y  S  R  F  L  G  G  S  Y  P  R  *  *  *  *  I  S  S  S  S  *  F  N  Y  C  R  T  F  W  K  *  F  *  C  S  *  S  R  S  T  S  K  F  I  T  R  Q  E  S  F  K  S  Q  T  W  I  K  K  *  R  C  I  C  F  S  K  K  T  Q  T  V  N  K  Q  *  V  G  V  *  H  S  *  N  R  K  G  *  *  S  W  C  R  *  R  R  S  I  F  Q  F  T  F  *  W  K  C  E  E  Q  S  I  L  N  F  T  *  I  V  F  </second_frame>
            <third_frame>   C  S  A  A  R  S  T  L  V  A  D  R  R  P  S  P  A  A  A  A  :  *  F  F  F  V  T  A  E  I  M  G  S  E  M  E  I  V  E  Q  R  L  N  T  F  V  S  Q  L  Q  T  E  F  A  I  L  D  R  L  V  Y  K  N  K  N  Q  H  R  R  C  S  Y  F  Q  Y  L  L  K  :  V  R  R  D  V  R  L  L  Q  T  T  N  L  E  E  V  L  S  D  S  F  Q  V  L  N  G  K  R  P  K  Q  K  V  Q  L  L  E  S :   L  K  R  R  R  S  N  G  G  K  Y  N  F  L  E  R  L  L  G  V  A  H  L  L  S  Q  :  M  V  E  P  V  L  R  A  A  S :   E  I  S  T  L  L  A  R  S  F  F  M  G  F  S  L  T  V  L  S  L  L  A  R  I  R  V  L  V  Q  Q  :  I  L  L  D  V  V  C  V  F  N  N  V  S  S  L  S  Q  R  E  Q  A  I  K  L  T  Q  D  G  F  E  :  V  F  R  E  Y  F  P  P  K  Q  Q  V  V  F  L  E  C  I  W  E  S  D  K  Y  M  L  V  E  R  Q  N  Q  K  D  V  G  S  Q  E  K  D  V  G  E  D  V  S  V  E  A  S  K  V  Q  Y  E  S  I  G  L  F  L  G   : D  D  E  P  G  Q  T  A  S  K  D  S  A  E  D  G  Q  T  M  K  D  N  D  I  V  D  S  L  E  D  P  I  Q  D  S  N  D  E  S  Q  A  Q  V  D  S  T  I  A  E  P  S  G  N  N  F  D  A  P  E  A  G  A  L  P  S  S  S  R  D  K  N  P  S  K  A  K  H  G  S  R  N  S  V  A  F  V  S  V  K  R  P  K  L  S  T  N  N  E  L  G  F  D  I  H  R  T  E  K  V  D  N  P  G  V  D  K  E  D  P  F  F  S  L  L  F  S  G  N  V  K  S  S  L  F  *  T  S  P  K  *  F  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0226J04.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82336" stop="82169"/>
                    <exon start="81411" stop="81299"/>
                    <exon start="80684" stop="80606"/>
                    <exon start="80032" stop="80004"/>
                    <exon start="79509" stop="79416"/>
                    <exon start="79022" stop="78933"/>
                    <exon start="78688" stop="78499"/>
                    <exon start="78064" stop="77661"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1164</number_coding_nucleotides>
                  <number_encoded_amino_acids>388</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFFVTAEIMGSEMEIVEQRLNTFVSQLQTEFAILDRLVYKNKNQHRRCSYFQYLLKVRRDVRLLQTTNLEEVLSDSFQVLNGKRPKQKVQLLESLKRRRSNGGKYNFLERLLGVAHLLSQMVEPVLRAASEISTLLARSFFMGFSLTVLSLLARIRVLVQQILLDVVCVFNNVSSLSQREQAIKLTQDGFEVFREYFPPKQQVVFLECIWESDKYMLVERQNQKDVGSQEKDVGEDVSVEASKVQYESIGLFLGDDEPGQTASKDSAEDGQTMKDNDIVDSLEDPIQDSNDESQAQVDSTIAEPSGNNFDAPEAGALPSSSRDKNPSKAKHGSRNSVAFVSVKRPKLSTNNELGFDIHRTEKVDNPGVDKEDPFFSLLFSGNVKSSLF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="80020" e_stop="79470"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="80020" e_stop="79470" e_length="551"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80020" stop="79470"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U595212" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTTTAAGGGCCGCGTCGTATCCTTCTTACTTCTTTTTTGCGCACTAATCCTTCATTTTTTATGTTGTTTATGGGACAAGATTTACTTAAATAATAGGAAGAGATTAAGTTGTTCATTTTCTTTCATAGCTCTTTGGGTGTGTTAGGTGATTGGAATAAATGAGGTTATGTTTTGAAATACAGTGAGTGCTTATTTAGCTACATATAACAAAACCTTTTCTGTTCTACAAATTACTAGAGTTCTGCACAGCTGATTTGCCGTAAACATATCGGTTTGATAAATTGGTGTTGTTGGATATTAATAGTACTTCCTTTCTTCCTTGTTTTTTTCCATATATTCATAATTGCACATGTCCTATCTTCGTCTCATTTGGTAAGATGACTTTGTTTTTCATCTGTGCTGATTGCTTTTCATTTCAAAGTAAACACTTGATCAATGTTCCTGTTTTATGTAAATTCCAATGTGGATTTTTAGCCATTAATGATTGTTTCTACCCTTAACAGTAGACAGGGAGATATCCACACTTCTTGCACGATCATTTTTTATGGGA</gDNA_template>
            <first_frame> V  L  R  A  A  S  Y  P  S  Y  F  F  F  A  H  *  S  F  I  F  Y  V  V  Y  G  T  R  F  T  *  I  I  G  R  D  *  V  V  H  F  L  S  *  L  F  G  C  V  R  *  L  E  *  M  R  L  C  F  E  I  Q  *  V  L  I  *  L  H  I  T  K  P  F  L  F  Y  K  L  L  E  F  C  T  A  D  L  P  *  T  Y  R  F  D  K  L  V  L  L  D  I  N  S  T  S  F  L  P  C  F  F  P  Y  I  H  N  C  T  C  P  I  F  V  S  F  G  K  M  T  L  F  F  I  C  A  D  C  F  S  F  Q  S  K  H  L  I  N  V  P  V  L  C  K  F  Q  C  G  F  L  A  I  N  D  C  F  Y  P  *  Q  *  T  G  R  Y  P  H  F  L  H  D  H  F  L  W   </first_frame>
            <second_frame>  F  *  G  P  R  R  I  L  L  T  S  F  L  R  T  N  P  S  F  F  M  L  F  M  G  Q  D  L  L  K  *  *  E  E  I  K  L  F  I  F  F  H  S  S  L  G  V  L  G  D  W  N  K  *  G  Y  V  L  K  Y  S  E  C  L  F  S  Y  I  *  Q  N  L  F  C  S  T  N  Y  *  S  S  A  Q  L  I  C  R  K  H  I  G  L  I  N  W  C  C  W  I  L  I  V  L  P  F  F  L  V  F  F  H  I  F  I  I  A  H  V  L  S  S  S  H  L  V  R  *  L  C  F  S  S  V  L  I  A  F  H  F  K  V  N  T  *  S  M  F  L  F  Y  V  N  S  N  V  D  F  *  P  L  M  I  V  S  T  L  N  S  R  Q  G  D  I  H  T  S  C  T  I  I  F  Y  G  </second_frame>
            <third_frame>   F  K  G  R  V  V  S  F  L  L  L  F  C  A  L  I  L  H  F  L  C  C  L  W  D  K  I  Y  L  N  N  R  K  R  L  S  C  S  F  S  F  I  A  L  W  V  C  *  V  I  G  I  N  E  V  M  F  *  N  T  V  S  A  Y  L  A  T  Y  N  K  T  F  S  V  L  Q  I  T  R  V  L  H  S  *  F  A  V  N  I  S  V  *  *  I  G  V  V  G  Y  *  *  Y  F  L  S  S  L  F  F  S  I  Y  S  *  L  H  M  S  Y  L  R  L  I  W  *  D  D  F  V  F  H  L  C  *  L  L  F  I  S  K  *  T  L  D  Q  C  S  C  F  M  *  I  P  M  W  I  F  S  H  *  *  L  F  L  P  L  T  V  D  R  E  I  S  T  L  L  A  R  S  F  F  M  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0226J04.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79756" stop="79520"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TYRFDKLVLLDINSTSFLPCFFPYIHNCTCPIFVSFGKMTLFFICADCFSFQSKHLINVPVLCKFQCGFLAINDCFYP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="93134" PGL_stop="92461"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="93134" e_stop="92461"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.948"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.948">
            <gDNA_exon_boundary e_start="93134" e_stop="92461" e_length="674"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93134" stop="92780"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U595468" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92923" stop="92461"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U595465" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCAAACTTCTAAAATGGCTAATCCTCAACAACCTTTGTTAATAAAAACACACAAACAAAATCCAATAATCAGCTTCAAGATCCTCAGTTTTGTTATAACTTTGTTTGTTGCTCTCTTCTTAGTTGCTCCATATCAAGTTGAGATTAAACATTCTAATCTATGTAAAACTGCACAAGATTCCCAACTCTGTCTCAGTTATGTCTCTGATTTGATATCCAATGAAATTGTCACAACAGAATCAGATGGACATAGTATTCTGATGAAATTTTTAGTTAACTATGTCCATCAAATGAACAATGCAATTCCAGTGGTTCGCAAAATGAAGAATCAGATCAATGACATTCGTCAACACGGGGCTTTAACTGATTGTCTTGAGCTTCTTGATCAGTCAGTTGATTTCGCATCTGATTCAATTGCAGCAATTGATAAAAGAAGTCGCTCGGAGCATGCCAATGCGCAAAGTTGGCTAAGTGGTGTGCTTACTAACCACGTTACGTGCTTGGATGAGCTTGATTCCTTTACTAAAGCTATGATAAATGGAACGAATCTTGAAGAGTTGATCTCGAGAGCTAAGGTAGCATTAGCGATGCTTGCGTCTTTGACAACTCAGGATGAGGATGTTTTCATGACGGTTTTAGGAAAAATGCCATCTTGGGTGAGTTCGATGGATAGGA</gDNA_template>
            <first_frame> A  N  F  *  N  G  *  S  S  T  T  F  V  N  K  N  T  Q  T  K  S  N  N  Q  L  Q  D  P  Q  F  C  Y  N  F  V  C  C  S  L  L  S  C  S  I  S  S  *  D  *  T  F  *  S  M  *  N  C  T  R  F  P  T  L  S  Q  L  C  L  *  F  D  I  Q  *  N  C  H  N  R  I  R  W  T  *  Y  S  D  E  I  F  S  *  L  C  P  S  N  E  Q  C  N  S  S  G  S  Q  N  E  E  S  D  Q  *  H  S  S  T  R  G  F  N  *  L  S  *  A  S  *  S  V  S  *  F  R  I  *  F  N  C  S  N  *  *  K  K  S  L  G  A  C  Q  C  A  K  L  A  K  W  C  A  Y  *  P  R  Y  V  L  G  *  A  *  F  L  Y  *  S  Y  D  K  W  N  E  S  *  R  V  D  L  E  S  *  G  S  I  S  D  A  C  V  F  D  N  S  G  *  G  C  F  H  D  G  F  R  K  N  A  I  L  G  E  F  D  G  *   </first_frame>
            <second_frame>  Q  T  S  K  M  A  N  P  Q  Q  P  L  L  I  K  T  H  K  Q  N  P  I  I  S  F  K  I  L  S  F  V  I  T  L  F  V  A  L  F  L  V  A  P  Y  Q  V  E  I  K  H  S  N  L  C  K  T  A  Q  D  S  Q  L  C  L  S  Y  V  S  D  L  I  S  N  E  I  V  T  T  E  S  D  G  H  S  I  L  M  K  F  L  V  N  Y  V  H  Q  M  N  N  A  I  P  V  V  R  K  M  K  N  Q  I  N  D  I  R  Q  H  G  A  L  T  D  C  L  E  L  L  D  Q  S  V  D  F  A  S  D  S  I  A  A  I  D  K  R  S  R  S  E  H  A  N  A  Q  S  W  L  S  G  V  L  T  N  H  V  T  C  L  D  E  L  D  S  F  T  K  A  M  I  N  G  T  N  L  E  E  L  I  S  R  A  K  V  A  L  A  M  L  A  S  L  T  T  Q  D  E  D  V  F  M  T  V  L  G  K  M  P  S  W  V  S  S  M  D  R  </second_frame>
            <third_frame>   K  L  L  K  W  L  I  L  N  N  L  C  *  *  K  H  T  N  K  I  Q  *  S  A  S  R  S  S  V  L  L  *  L  C  L  L  L  S  S  *  L  L  H  I  K  L  R  L  N  I  L  I  Y  V  K  L  H  K  I  P  N  S  V  S  V  M  S  L  I  *  Y  P  M  K  L  S  Q  Q  N  Q  M  D  I  V  F  *  *  N  F  *  L  T  M  S  I  K  *  T  M  Q  F  Q  W  F  A  K  *  R  I  R  S  M  T  F  V  N  T  G  L  *  L  I  V  L  S  F  L  I  S  Q  L  I  S  H  L  I  Q  L  Q  Q  L  I  K  E  V  A  R  S  M  P  M  R  K  V  G  *  V  V  C  L  L  T  T  L  R  A  W  M  S  L  I  P  L  L  K  L  *  *  M  E  R  I  L  K  S  *  S  R  E  L  R  *  H  *  R  C  L  R  L  *  Q  L  R  M  R  M  F  S  *  R  F  *  E  K  C  H  L  G  *  V  R  W  I  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0226J04.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="93133" stop="92462"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>672</number_coding_nucleotides>
                  <number_encoded_amino_acids>224</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QTSKMANPQQPLLIKTHKQNPIISFKILSFVITLFVALFLVAPYQVEIKHSNLCKTAQDSQLCLSYVSDLISNEIVTTESDGHSILMKFLVNYVHQMNNAIPVVRKMKNQINDIRQHGALTDCLELLDQSVDFASDSIAAIDKRSRSEHANAQSWLSGVLTNHVTCLDELDSFTKAMINGTNLEELISRAKVALAMLASLTTQDEDVFMTVLGKMPSWVSSMDR</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="102832" PGL_stop="100711"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="102832" e_stop="102363"/>
            <exon e_start="101873" e_stop="101313"/>
            <exon e_start="101209" e_stop="100711"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.995" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="102832" e_stop="102363" e_length="470"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="102362" i_stop="101874" i_length="489"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="101873" e_stop="101313" e_length="561"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.995">
            <gDNA_intron_boundary i_start="101312" i_stop="101210" i_length="103"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="101209" e_stop="100711" e_length="499"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102832" stop="102363"/>
              <exon start="101873" stop="101313"/>
              <exon start="101209" stop="100711"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U580030" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102757" stop="102437"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590180" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102721" stop="102363"/>
              <exon start="101873" stop="101659"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590421" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101797" stop="101313"/>
              <exon start="101209" stop="101194"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590777" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCATCACTCAGCTCTACACTTGTCACTCCCCTATATATATCCTTCTTCTTCCCCTTCCATTTCCACACTCAAAACTCAAAACACAATCTTCTCCGCCCTAAATCCCAGTTCTCAATTCTTCTCCATCAATGGCTTCCACCTTAGCTTCCTCTGTTATTTCCAAGACTAATTTCATTGACACACACAAATCATCCTTCTATGGCGTTCCAATTTCATCACAAACTCGATTGAAAATCGTTAAATCGACTCCACAAAACATGTCTGTTTCCATGTCTGCTGATGCTTCTCCTCCTTACGATCTCGGAAGTTTCAGTTTTAATCCGATTAAGGAATCGATTGTTGCTCGCGAAATGACTCGGAGGTATATGACGGATATGATTACTTATGCTGATACTGATGTTGTCATTGTTGGTGCTGGATCTGCTGGTTTATCTTGTGCTTATGAACTCAGCAAGAACCCTAATGTTCAG : GTGGCTATTCTTGAGCAATCTGTGAGCCCTGGTGGAGGTGCTTGGCTAGGTGGACAACTCTTCTCTGCTATGGTTGTGCGTAAGCCAGCACATCTTTTCTTGAACGAGCTAGGCATTGACTACGACGAGCAAGACAACTACGTGGTCATCAAACACGCTGCCTTGTTCACCTCAACCATCATGAGCAAGCTTTTGGCCAGGCCAAATGTGAAGCTCTTCAATGCTGTTGCAACAGAGGACCTTATCGTGAAGAACGGAAGAGTCGGTGGTGTTGTCACTAACTGGTCTTTGGTTTCCCAGAACCACGACACACAATCCTGCATGGACCCTAATGTTATGGAGGCTAAGATTGTGGTCAGCTCTTGTGGCCACGACGGCCCCATGGGCGCCACCGGTGTTAAGAGGCTCAGGAGCATTGGCATGATCAACAGTGTCCCTGGAATGAAAGCTTTGGACATGAACGCTGCTGAGGACGCGATTGTTAGACTTACCAGAGAGGTCGTACCTGGTATGATTGTCACAGGAATGGAAGTTGCTGAAATTGATGGAGCACCACGAATG : GGTCCAACTTTTGGAGCTATGATGATATCAGGACAGAAGGCAGCTCACCTCGCCCTACGAGCGTTGGGATTGCCCAACGCCCTTGATGGAACTGCAGAAACAAGCGTCCTCCCGGAGCTTATGTTGGCTGCAGCTGATGAAGCTGAAATTGCTGATGCTTGAATGTAATTATAGTTTTCTAAGCAAGGATTATGAGAAATATTAGTTTTTCCTAGATAAGTGAGTATGGTTGTGGTGGTGATGATAAATTGGTAAGGGGATGATGAATAAGAGTCTTCAAGATGAAAGTCATTGTGTTAACTTTGGCTATTTTATTTTGATTTATTTCTATTTCGAAACTTTTATGGAAGAAAGTAGATTTTAGTTTTGGTCGTTCCTTGAATAATCTTTTAGGCCTTTTGGGCTTTGTACTTGATATGGTTTGGGCCTCATTGGAGAAGCCATATGAATGAACATTGTGATTGGGCTAAGATGTTTTTGCACTAATGGCCTTTTGAGG</gDNA_template>
            <first_frame> S  S  L  S  S  T  L  V  T  P  L  Y  I  S  F  F  F  P  F  H  F  H  T  Q  N  S  K  H  N  L  L  R  P  K  S  Q  F  S  I  L  L  H  Q  W  L  P  P  *  L  P  L  L  F  P  R  L  I  S  L  T  H  T  N  H  P  S  M  A  F  Q  F  H  H  K  L  D  *  K  S  L  N  R  L  H  K  T  C  L  F  P  C  L  L  M  L  L  L  L  T  I  S  E  V  S  V  L  I  R  L  R  N  R  L  L  L  A  K  *  L  G  G  I  *  R  I  *  L  L  M  L  I  L  M  L  S  L  L  V  L  D  L  L  V  Y  L  V  L  M  N  S  A  R  T  L  M  F  R :   W  L  F  L  S  N  L  *  A  L  V  E  V  L  G  *  V  D  N  S  S  L  L  W  L  C  V  S  Q  H  I  F  S  *  T  S  *  A  L  T  T  T  S  K  T  T  T  W  S  S  N  T  L  P  C  S  P  Q  P  S  *  A  S  F  W  P  G  Q  M  *  S  S  S  M  L  L  Q  Q  R  T  L  S  *  R  T  E  E  S  V  V  L  S  L  T  G  L  W  F  P  R  T  T  T  H  N  P  A  W  T  L  M  L  W  R  L  R  L  W  S  A  L  V  A  T  T  A  P  W  A  P  P  V  L  R  G  S  G  A  L  A  *  S  T  V  S  L  E  *  K  L  W  T  *  T  L  L  R  T  R  L  L  D  L  P  E  R  S  Y  L  V  *  L  S  Q  E  W  K  L  L  K  L  M  E  H  H  E  W :   V  Q  L  L  E  L  *  *  Y  Q  D  R  R  Q  L  T  S  P  Y  E  R  W  D  C  P  T  P  L  M  E  L  Q  K  Q  A  S  S  R  S  L  C  W  L  Q  L  M  K  L  K  L  L  M  L  E  C  N  Y  S  F  L  S  K  D  Y  E  K  Y  *  F  F  L  D  K  *  V  W  L  W  W  *  *  *  I  G  K  G  M  M  N  K  S  L  Q  D  E  S  H  C  V  N  F  G  Y  F  I  L  I  Y  F  Y  F  E  T  F  M  E  E  S  R  F  *  F  W  S  F  L  E  *  S  F  R  P  F  G  L  C  T  *  Y  G  L  G  L  I  G  E  A  I  *  M  N  I  V  I  G  L  R  C  F  C  T  N  G  L  L  R </first_frame>
            <second_frame>  H  H  S  A  L  H  L  S  L  P  Y  I  Y  P  S  S  S  P  S  I  S  T  L  K  T  Q  N  T  I  F  S  A  L  N  P  S  S  Q  F  F  S  I  N  G  F  H  L  S  F  L  C  Y  F  Q  D  *  F  H  *  H  T  Q  I  I  L  L  W  R  S  N  F  I  T  N  S  I  E  N  R  *  I  D  S  T  K  H  V  C  F  H  V  C  *  C  F  S  S  L  R  S  R  K  F  Q  F  *  S  D  *  G  I  D  C  C  S  R  N  D  S  E  V  Y  D  G  Y  D  Y  L  C  *  Y  *  C  C  H  C  W  C  W  I  C  W  F  I  L  C  L  *  T  Q  Q  E  P  *  C  S   : G  G  Y  S  *  A  I  C  E  P  W  W  R  C  L  A  R  W  T  T  L  L  C  Y  G  C  A  *  A  S  T  S  F  L  E  R  A  R  H  *  L  R  R  A  R  Q  L  R  G  H  Q  T  R  C  L  V  H  L  N  H  H  E  Q  A  F  G  Q  A  K  C  E  A  L  Q  C  C  C  N  R  G  P  Y  R  E  E  R  K  S  R  W  C  C  H  *  L  V  F  G  F  P  E  P  R  H  T  I  L  H  G  P  *  C  Y  G  G  *  D  C  G  Q  L  L  W  P  R  R  P  H  G  R  H  R  C  *  E  A  Q  E  H  W  H  D  Q  Q  C  P  W  N  E  S  F  G  H  E  R  C  *  G  R  D  C  *  T  Y  Q  R  G  R  T  W  Y  D  C  H  R  N  G  S  C  *  N  *  W  S  T  T  N   : G  S  N  F  W  S  Y  D  D  I  R  T  E  G  S  S  P  R  P  T  S  V  G  I  A  Q  R  P  *  W  N  C  R  N  K  R  P  P  G  A  Y  V  G  C  S  *  *  S  *  N  C  *  C  L  N  V  I  I  V  F  *  A  R  I  M  R  N  I  S  F  S  *  I  S  E  Y  G  C  G  G  D  D  K  L  V  R  G  *  *  I  R  V  F  K  M  K  V  I  V  L  T  L  A  I  L  F  *  F  I  S  I  S  K  L  L  W  K  K  V  D  F  S  F  G  R  S  L  N  N  L  L  G  L  L  G  F  V  L  D  M  V  W  A  S  L  E  K  P  Y  E  *  T  L  *  L  G  *  D  V  F  A  L  M  A  F  *   </second_frame>
            <third_frame>   I  T  Q  L  Y  T  C  H  S  P  I  Y  I  L  L  L  P  L  P  F  P  H  S  K  L  K  T  Q  S  S  P  P  *  I  P  V  L  N  S  S  P  S  M  A  S  T  L  A  S  S  V  I  S  K  T  N  F  I  D  T  H  K  S  S  F  Y  G  V  P  I  S  S  Q  T  R  L  K  I  V  K  S  T  P  Q  N  M  S  V  S  M  S  A  D  A  S  P  P  Y  D  L  G  S  F  S  F  N  P  I  K  E  S  I  V  A  R  E  M  T  R  R  Y  M  T  D  M  I  T  Y  A  D  T  D  V  V  I  V  G  A  G  S  A  G  L  S  C  A  Y  E  L  S  K  N  P  N  V  Q  :  V  A  I  L  E  Q  S  V  S  P  G  G  G  A  W  L  G  G  Q  L  F  S  A  M  V  V  R  K  P  A  H  L  F  L  N  E  L  G  I  D  Y  D  E  Q  D  N  Y  V  V  I  K  H  A  A  L  F  T  S  T  I  M  S  K  L  L  A  R  P  N  V  K  L  F  N  A  V  A  T  E  D  L  I  V  K  N  G  R  V  G  G  V  V  T  N  W  S  L  V  S  Q  N  H  D  T  Q  S  C  M  D  P  N  V  M  E  A  K  I  V  V  S  S  C  G  H  D  G  P  M  G  A  T  G  V  K  R  L  R  S  I  G  M  I  N  S  V  P  G  M  K  A  L  D  M  N  A  A  E  D  A  I  V  R  L  T  R  E  V  V  P  G  M  I  V  T  G  M  E  V  A  E  I  D  G  A  P  R  M  :  G  P  T  F  G  A  M  M  I  S  G  Q  K  A  A  H  L  A  L  R  A  L  G  L  P  N  A  L  D  G  T  A  E  T  S  V  L  P  E  L  M  L  A  A  A  D  E  A  E  I  A  D  A  *  M  *  L  *  F  S  K  Q  G  L  *  E  I  L  V  F  P  R  *  V  S  M  V  V  V  V  M  I  N  W  *  G  D  D  E  *  E  S  S  R  *  K  S  L  C  *  L  W  L  F  Y  F  D  L  F  L  F  R  N  F  Y  G  R  K  *  I  L  V  L  V  V  P  *  I  I  F  *  A  F  W  A  L  Y  L  I  W  F  G  P  H  W  R  S  H  M  N  E  H  C  D  W  A  K  M  F  L  H  *  W  P  F  E  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0226J04.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102731" stop="102363"/>
                    <exon start="101873" stop="101313"/>
                    <exon start="101209" stop="101048"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1089</number_coding_nucleotides>
                  <number_encoded_amino_acids>363</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IPVLNSSPSMASTLASSVISKTNFIDTHKSSFYGVPISSQTRLKIVKSTPQNMSVSMSADASPPYDLGSFSFNPIKESIVAREMTRRYMTDMITYADTDVVIVGAGSAGLSCAYELSKNPNVQVAILEQSVSPGGGAWLGGQLFSAMVVRKPAHLFLNELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVATEDLIVKNGRVGGVVTNWSLVSQNHDTQSCMDPNVMEAKIVVSSCGHDGPMGATGVKRLRSIGMINSVPGMKALDMNAAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALRALGLPNALDGTAETSVLPELMLAAADEAEIADA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="102757" e_stop="102363"/>
            <exon e_start="101873" e_stop="101553"/>
            <exon e_start="101492" e_stop="101342"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="0.997"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="102757" e_stop="102363" e_length="395"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="102362" i_stop="101874" i_length="489"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="101873" e_stop="101553" e_length="321"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="101552" i_stop="101493" i_length="60"/>
          </intron>
          <exon e_serial="3" e_score="0.993">
            <gDNA_exon_boundary e_start="101492" e_stop="101342" e_length="151"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102757" stop="102437"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590180" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102746" stop="102363"/>
              <exon start="101873" stop="101553"/>
              <exon start="101492" stop="101342"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U592837" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102721" stop="102363"/>
              <exon start="101873" stop="101659"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590421" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCAAAACACAATCTTCTCCGCCCTAAATCCCAGTTCTCAATTCTTCTCCATCAATGGCTTCCACCTTAGCTTCCTCTGTTATTTCCAAGACTAATTTCATTGACACACACAAATCATCCTTCTATGGCGTTCCAATTTCATCACAAACTCGATTGAAAATCGTTAAATCGACTCCACAAAACATGTCTGTTTCCATGTCTGCTGATGCTTCTCCTCCTTACGATCTCGGAAGTTTCAGTTTTAATCCGATTAAGGAATCGATTGTTGCTCGCGAAATGACTCGGAGGTATATGACGGATATGATTACTTATGCTGATACTGATGTTGTCATTGTTGGTGCTGGATCTGCTGGTTTATCTTGTGCTTATGAACTCAGCAAGAACCCTAATGTTCAG : GTGGCTATTCTTGAGCAATCTGTGAGCCCTGGTGGAGGTGCTTGGCTAGGTGGACAACTCTTCTCTGCTATGGTTGTGCGTAAGCCAGCACATCTTTTCTTGAACGAGCTAGGCATTGACTACGACGAGCAAGACAACTACGTGGTCATCAAACACGCTGCCTTGTTCACCTCAACCATCATGAGCAAGCTTTTGGCCAGGCCAAATGTGAAGCTCTTCAATGCTGTTGCAACAGAGGACCTTATCGTGAAGAACGGAAGAGTCGGTGGTGTTGTCACTAACTGGTCTTTGGTTTCCCAGAACCACGACACACAATCCTGC : ATGGGCGCCACCGGTGTTAAGAGGCTCAGGAGCATTGGCATGATCAACAGTGTCCCTGGAATGAAAGCTTTGGACATGAACGCTGCTGAGGACGCGATTGTTAGACTTACCAGAGAGGTCGTACCTGGTATGATTGTCACAGGAATGGAAG</gDNA_template>
            <first_frame> S  K  H  N  L  L  R  P  K  S  Q  F  S  I  L  L  H  Q  W  L  P  P  *  L  P  L  L  F  P  R  L  I  S  L  T  H  T  N  H  P  S  M  A  F  Q  F  H  H  K  L  D  *  K  S  L  N  R  L  H  K  T  C  L  F  P  C  L  L  M  L  L  L  L  T  I  S  E  V  S  V  L  I  R  L  R  N  R  L  L  L  A  K  *  L  G  G  I  *  R  I  *  L  L  M  L  I  L  M  L  S  L  L  V  L  D  L  L  V  Y  L  V  L  M  N  S  A  R  T  L  M  F  R :   W  L  F  L  S  N  L  *  A  L  V  E  V  L  G  *  V  D  N  S  S  L  L  W  L  C  V  S  Q  H  I  F  S  *  T  S  *  A  L  T  T  T  S  K  T  T  T  W  S  S  N  T  L  P  C  S  P  Q  P  S  *  A  S  F  W  P  G  Q  M  *  S  S  S  M  L  L  Q  Q  R  T  L  S  *  R  T  E  E  S  V  V  L  S  L  T  G  L  W  F  P  R  T  T  T  H  N  P  A :   W  A  P  P  V  L  R  G  S  G  A  L  A  *  S  T  V  S  L  E  *  K  L  W  T  *  T  L  L  R  T  R  L  L  D  L  P  E  R  S  Y  L  V  *  L  S  Q  E  W  K </first_frame>
            <second_frame>  Q  N  T  I  F  S  A  L  N  P  S  S  Q  F  F  S  I  N  G  F  H  L  S  F  L  C  Y  F  Q  D  *  F  H  *  H  T  Q  I  I  L  L  W  R  S  N  F  I  T  N  S  I  E  N  R  *  I  D  S  T  K  H  V  C  F  H  V  C  *  C  F  S  S  L  R  S  R  K  F  Q  F  *  S  D  *  G  I  D  C  C  S  R  N  D  S  E  V  Y  D  G  Y  D  Y  L  C  *  Y  *  C  C  H  C  W  C  W  I  C  W  F  I  L  C  L  *  T  Q  Q  E  P  *  C  S   : G  G  Y  S  *  A  I  C  E  P  W  W  R  C  L  A  R  W  T  T  L  L  C  Y  G  C  A  *  A  S  T  S  F  L  E  R  A  R  H  *  L  R  R  A  R  Q  L  R  G  H  Q  T  R  C  L  V  H  L  N  H  H  E  Q  A  F  G  Q  A  K  C  E  A  L  Q  C  C  C  N  R  G  P  Y  R  E  E  R  K  S  R  W  C  C  H  *  L  V  F  G  F  P  E  P  R  H  T  I  L   : H  G  R  H  R  C  *  E  A  Q  E  H  W  H  D  Q  Q  C  P  W  N  E  S  F  G  H  E  R  C  *  G  R  D  C  *  T  Y  Q  R  G  R  T  W  Y  D  C  H  R  N  G   </second_frame>
            <third_frame>   K  T  Q  S  S  P  P  *  I  P  V  L  N  S  S  P  S  M  A  S  T  L  A  S  S  V  I  S  K  T  N  F  I  D  T  H  K  S  S  F  Y  G  V  P  I  S  S  Q  T  R  L  K  I  V  K  S  T  P  Q  N  M  S  V  S  M  S  A  D  A  S  P  P  Y  D  L  G  S  F  S  F  N  P  I  K  E  S  I  V  A  R  E  M  T  R  R  Y  M  T  D  M  I  T  Y  A  D  T  D  V  V  I  V  G  A  G  S  A  G  L  S  C  A  Y  E  L  S  K  N  P  N  V  Q  :  V  A  I  L  E  Q  S  V  S  P  G  G  G  A  W  L  G  G  Q  L  F  S  A  M  V  V  R  K  P  A  H  L  F  L  N  E  L  G  I  D  Y  D  E  Q  D  N  Y  V  V  I  K  H  A  A  L  F  T  S  T  I  M  S  K  L  L  A  R  P  N  V  K  L  F  N  A  V  A  T  E  D  L  I  V  K  N  G  R  V  G  G  V  V  T  N  W  S  L  V  S  Q  N  H  D  T  Q  S  C  :  M  G  A  T  G  V  K  R  L  R  S  I  G  M  I  N  S  V  P  G  M  K  A  L  D  M  N  A  A  E  D  A  I  V  R  L  T  R  E  V  V  P  G  M  I  V  T  G  M  E  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0226J04.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102731" stop="102363"/>
                    <exon start="101873" stop="101553"/>
                    <exon start="101492" stop="101343"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>840</number_coding_nucleotides>
                  <number_encoded_amino_acids>280</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IPVLNSSPSMASTLASSVISKTNFIDTHKSSFYGVPISSQTRLKIVKSTPQNMSVSMSADASPPYDLGSFSFNPIKESIVAREMTRRYMTDMITYADTDVVIVGAGSAGLSCAYELSKNPNVQVAILEQSVSPGGGAWLGGQLFSAMVVRKPAHLFLNELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVATEDLIVKNGRVGGVVTNWSLVSQNHDTQSCMGATGVKRLRSIGMINSVPGMKALDMNAAEDAIVRLTREVVPGMIVTGME</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="102757" e_stop="102369"/>
            <exon e_start="101830" e_stop="101313"/>
            <exon e_start="101209" e_stop="101194"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.906" acc_prob="0.000" e_score="0.977"/>
          <exon-intron don_prob="0.999" acc_prob="0.995" e_score="0.961"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.977">
            <gDNA_exon_boundary e_start="102757" e_stop="102369" e_length="389"/>
          </exon>
          <intron i_serial="1" don_prob="0.906" acc_prob="0.000">
            <gDNA_intron_boundary i_start="102368" i_stop="101831" i_length="538"/>
          </intron>
          <exon e_serial="2" e_score="0.961">
            <gDNA_exon_boundary e_start="101830" e_stop="101313" e_length="518"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.995">
            <gDNA_intron_boundary i_start="101312" i_stop="101210" i_length="103"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="101209" e_stop="101194" e_length="16"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102757" stop="102437"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590180" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102751" stop="102369"/>
              <exon start="101830" stop="101547"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590752" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101797" stop="101313"/>
              <exon start="101209" stop="101194"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590777" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCAAAACACAATCTTCTCCGCCCTAAATCCCAGTTCTCAATTCTTCTCCATCAATGGCTTCCACCTTAGCTTCCTCTGTTATTTCCAAGACTAATTTCATTGACACACACAAATCATCCTTCTATGGCGTTCCAATTTCATCACAAACTCGATTGAAAATCGTTAAATCGACTCCACAAAACATGTCTGTTTCCATGTCTGCTGATGCTTCTCCTCCTTACGATCTCGGAAGTTTCAGTTTTAATCCGATTAAGGAATCGATTGTTGCTCGCGAAATGACTCGGAGGTATATGACGGATATGATTACTTATGCTGATACTGATGTTGTCATTGTTGGTGCTGGATCTGCTGGTTTATCTTGTGCTTATGAACTCAGCAAGAACCCTAAT : GGCTAGGTGGACAACTCTTCTCTGCTATGGTTGTGCGTAAGCCAGCACATCTTTTCTTGAACGAGCTAGGCATTGACTACGACGAGCAAGACAACTACGTGGTCATCAAACACGCTGCCTTGTTCACCTCAACCATCATGAGCAAGCTTTTGGCCAGGCCAAATGTGAAGCTCTTCAATGCTGTTGCAACAGAGGACCTTATCGTGAAGAACGGAAGAGTCGGTGGTGTTGTCACTAACTGGTCTTTGGTTTCCCAGAACCACGACACACAATCCTGCATGGACCCTAATGTTATGGAGGCTAAGATTGTGGTCAGCTCTTGTGGCCACGACGGCCCCATGGGCGCCACCGGTGTTAAGAGGCTCAGGAGCATTGGCATGATCAACAGTGTCCCTGGAATGAAAGCTTTGGACATGAACGCTGCTGAGGACGCGATTGTTAGACTTACCAGAGAGGTCGTACCTGGTATGATTGTCACAGGAATGGAAGTTGCTGAAATTGATGGAGCACCACGAATG : GGTCCAACTTTTGGAG</gDNA_template>
            <first_frame> S  K  H  N  L  L  R  P  K  S  Q  F  S  I  L  L  H  Q  W  L  P  P  *  L  P  L  L  F  P  R  L  I  S  L  T  H  T  N  H  P  S  M  A  F  Q  F  H  H  K  L  D  *  K  S  L  N  R  L  H  K  T  C  L  F  P  C  L  L  M  L  L  L  L  T  I  S  E  V  S  V  L  I  R  L  R  N  R  L  L  L  A  K  *  L  G  G  I  *  R  I  *  L  L  M  L  I  L  M  L  S  L  L  V  L  D  L  L  V  Y  L  V  L  M  N  S  A  R  T  L  M :   A  R  W  T  T  L  L  C  Y  G  C  A  *  A  S  T  S  F  L  E  R  A  R  H  *  L  R  R  A  R  Q  L  R  G  H  Q  T  R  C  L  V  H  L  N  H  H  E  Q  A  F  G  Q  A  K  C  E  A  L  Q  C  C  C  N  R  G  P  Y  R  E  E  R  K  S  R  W  C  C  H  *  L  V  F  G  F  P  E  P  R  H  T  I  L  H  G  P  *  C  Y  G  G  *  D  C  G  Q  L  L  W  P  R  R  P  H  G  R  H  R  C  *  E  A  Q  E  H  W  H  D  Q  Q  C  P  W  N  E  S  F  G  H  E  R  C  *  G  R  D  C  *  T  Y  Q  R  G  R  T  W  Y  D  C  H  R  N  G  S  C  *  N  *  W  S  T  T  N   : G  S  N  F  W   </first_frame>
            <second_frame>  Q  N  T  I  F  S  A  L  N  P  S  S  Q  F  F  S  I  N  G  F  H  L  S  F  L  C  Y  F  Q  D  *  F  H  *  H  T  Q  I  I  L  L  W  R  S  N  F  I  T  N  S  I  E  N  R  *  I  D  S  T  K  H  V  C  F  H  V  C  *  C  F  S  S  L  R  S  R  K  F  Q  F  *  S  D  *  G  I  D  C  C  S  R  N  D  S  E  V  Y  D  G  Y  D  Y  L  C  *  Y  *  C  C  H  C  W  C  W  I  C  W  F  I  L  C  L  *  T  Q  Q  E  P  *   : W  L  G  G  Q  L  F  S  A  M  V  V  R  K  P  A  H  L  F  L  N  E  L  G  I  D  Y  D  E  Q  D  N  Y  V  V  I  K  H  A  A  L  F  T  S  T  I  M  S  K  L  L  A  R  P  N  V  K  L  F  N  A  V  A  T  E  D  L  I  V  K  N  G  R  V  G  G  V  V  T  N  W  S  L  V  S  Q  N  H  D  T  Q  S  C  M  D  P  N  V  M  E  A  K  I  V  V  S  S  C  G  H  D  G  P  M  G  A  T  G  V  K  R  L  R  S  I  G  M  I  N  S  V  P  G  M  K  A  L  D  M  N  A  A  E  D  A  I  V  R  L  T  R  E  V  V  P  G  M  I  V  T  G  M  E  V  A  E  I  D  G  A  P  R  M  :  G  P  T  F  G  </second_frame>
            <third_frame>   K  T  Q  S  S  P  P  *  I  P  V  L  N  S  S  P  S  M  A  S  T  L  A  S  S  V  I  S  K  T  N  F  I  D  T  H  K  S  S  F  Y  G  V  P  I  S  S  Q  T  R  L  K  I  V  K  S  T  P  Q  N  M  S  V  S  M  S  A  D  A  S  P  P  Y  D  L  G  S  F  S  F  N  P  I  K  E  S  I  V  A  R  E  M  T  R  R  Y  M  T  D  M  I  T  Y  A  D  T  D  V  V  I  V  G  A  G  S  A  G  L  S  C  A  Y  E  L  S  K  N  P  N  :  G  *  V  D  N  S  S  L  L  W  L  C  V  S  Q  H  I  F  S  *  T  S  *  A  L  T  T  T  S  K  T  T  T  W  S  S  N  T  L  P  C  S  P  Q  P  S  *  A  S  F  W  P  G  Q  M  *  S  S  S  M  L  L  Q  Q  R  T  L  S  *  R  T  E  E  S  V  V  L  S  L  T  G  L  W  F  P  R  T  T  T  H  N  P  A  W  T  L  M  L  W  R  L  R  L  W  S  A  L  V  A  T  T  A  P  W  A  P  P  V  L  R  G  S  G  A  L  A  *  S  T  V  S  L  E  *  K  L  W  T  *  T  L  L  R  T  R  L  L  D  L  P  E  R  S  Y  L  V  *  L  S  Q  E  W  K  L  L  K  L  M  E  H  H  E  W :   V  Q  L  L  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0226J04.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102369" stop="101313"/>
                    <exon start="101209" stop="101195"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>534</number_coding_nucleotides>
                  <number_encoded_amino_acids>178</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>WLGGQLFSAMVVRKPAHLFLNELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVATEDLIVKNGRVGGVVTNWSLVSQNHDTQSCMDPNVMEAKIVVSSCGHDGPMGATGVKRLRSIGMINSVPGMKALDMNAAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFG</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0226J04.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102731" stop="102369"/>
                    <exon start="101830" stop="101825"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>366</number_coding_nucleotides>
                  <number_encoded_amino_acids>122</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IPVLNSSPSMASTLASSVISKTNFIDTHKSSFYGVPISSQTRLKIVKSTPQNMSVSMSADASPPYDLGSFSFNPIKESIVAREMTRRYMTDMITYADTDVVIVGAGSAGLSCAYELSKNPNG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="110857" PGL_stop="111596"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="110857" e_stop="111596"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.945"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.945">
            <gDNA_exon_boundary e_start="110857" e_stop="111596" e_length="740"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110857" stop="111532"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U589391" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111024" stop="111596"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U589393" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATCCCCTCATAATTTCCCCAAAGCGTAACCATGTGTGAATAAATTTTGAGCTAGTAGGGTTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCAGAATGCCGCAAAACTTCCATGCCTAAGCGAACTGTTGAGAGTACGTTTCGATTTCTGACTGTGTTAGCCTGGAAGTGCTTGTCCCAACCTTGTTTCTGAGCATGAACGCCCGCAAGCCAACATGTTAGTTGAAGCATCAGGGCGATTAGCAGCATGATATCAAAACGCTCTGAGCTGCTCGTTCGGCTATGGCGTAGGCCTAGTCCGTAGGCAGGACTTTTCAAGTCTCGGAAGGTTTCTTCAATCTGCATTCGCTTCGAATAGATATTAACAAGTTGTTTGGGTGTTCGAATTTCAACAGGTAAGTTAGTTGCTAGAATCCATGGCTCCTTTGCCGACGCTGAGTAGATTTTAGGTGACGGGTGGTGACAATGAGTCCGTGTCGAGCGCTGATTTTTTCGGCCTTTAGAGCGAGATTTATACAATAGAATTTGGCATGAGATTGGATTGCTTTTAGTCAGCCTCTTATAGCCTAAAGTCTTTGAGTGACTAGATGACATATCATGTAAGTTGCTGATAGGTTTCCAGTTTTCCGCTCCTAGGTCTGCATATTGTACTTTTCCTCTTACTCGACTTAACCAGTACCAACCCAGCTTCTCAACGGATTTATACCATGGCACTTTAAAGCCAGCATCACTGA</gDNA_template>
            <first_frame> I  P  S  *  F  P  Q  S  V  T  M  C  E  *  I  L  S  *  *  G  C  S  H  E  *  V  F  P  C  Y  C  V  A  R  M  P  Q  N  F  H  A  *  A  N  C  *  E  Y  V  S  I  S  D  C  V  S  L  E  V  L  V  P  T  L  F  L  S  M  N  A  R  K  P  T  C  *  L  K  H  Q  G  D  *  Q  H  D  I  K  T  L  *  A  A  R  S  A  M  A  *  A  *  S  V  G  R  T  F  Q  V  S  E  G  F  F  N  L  H  S  L  R  I  D  I  N  K  L  F  G  C  S  N  F  N  R  *  V  S  C  *  N  P  W  L  L  C  R  R  *  V  D  F  R  *  R  V  V  T  M  S  P  C  R  A  L  I  F  S  A  F  R  A  R  F  I  Q  *  N  L  A  *  D  W  I  A  F  S  Q  P  L  I  A  *  S  L  *  V  T  R  *  H  I  M  *  V  A  D  R  F  P  V  F  R  S  *  V  C  I  L  Y  F  S  S  Y  S  T  *  P  V  P  T  Q  L  L  N  G  F  I  P  W  H  F  K  A  S  I  T   </first_frame>
            <second_frame>  S  P  H  N  F  P  K  A  *  P  C  V  N  K  F  *  A  S  R  V  A  A  T  S  K  S  S  L  V  I  V  *  P  E  C  R  K  T  S  M  P  K  R  T  V  E  S  T  F  R  F  L  T  V  L  A  W  K  C  L  S  Q  P  C  F  *  A  *  T  P  A  S  Q  H  V  S  *  S  I  R  A  I  S  S  M  I  S  K  R  S  E  L  L  V  R  L  W  R  R  P  S  P  *  A  G  L  F  K  S  R  K  V  S  S  I  C  I  R  F  E  *  I  L  T  S  C  L  G  V  R  I  S  T  G  K  L  V  A  R  I  H  G  S  F  A  D  A  E  *  I  L  G  D  G  W  *  Q  *  V  R  V  E  R  *  F  F  R  P  L  E  R  D  L  Y  N  R  I  W  H  E  I  G  L  L  L  V  S  L  L  *  P  K  V  F  E  *  L  D  D  I  S  C  K  L  L  I  G  F  Q  F  S  A  P  R  S  A  Y  C  T  F  P  L  T  R  L  N  Q  Y  Q  P  S  F  S  T  D  L  Y  H  G  T  L  K  P  A  S  L  </second_frame>
            <third_frame>   P  L  I  I  S  P  K  R  N  H  V  *  I  N  F  E  L  V  G  L  Q  P  R  V  S  L  P  L  L  L  C  S  Q  N  A  A  K  L  P  C  L  S  E  L  L  R  V  R  F  D  F  *  L  C  *  P  G  S  A  C  P  N  L  V  S  E  H  E  R  P  Q  A  N  M  L  V  E  A  S  G  R  L  A  A  *  Y  Q  N  A  L  S  C  S  F  G  Y  G  V  G  L  V  R  R  Q  D  F  S  S  L  G  R  F  L  Q  S  A  F  A  S  N  R  Y  *  Q  V  V  W  V  F  E  F  Q  Q  V  S  *  L  L  E  S  M  A  P  L  P  T  L  S  R  F  *  V  T  G  G  D  N  E  S  V  S  S  A  D  F  F  G  L  *  S  E  I  Y  T  I  E  F  G  M  R  L  D  C  F  *  S  A  S  Y  S  L  K  S  L  S  D  *  M  T  Y  H  V  S  C  *  *  V  S  S  F  P  L  L  G  L  H  I  V  L  F  L  L  L  D  L  T  S  T  N  P  A  S  Q  R  I  Y  T  M  A  L  *  S  Q  H  H  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0226J04.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="-" PGL_start="112178" PGL_stop="111558"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="112178" e_stop="111558"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.919"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.919">
            <gDNA_exon_boundary e_start="112178" e_stop="111558" e_length="621"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="112178" stop="111956"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600659" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="112149" stop="111787"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U604614" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="112087" stop="111558"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U604818" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTGATGAATCCCCTAATGATTTTTATCAAAATCATTAAGTTAAGGTAGATACACATCTTGTCATATGATCAAATGGTTTCGCCAAAAATCAATAATCAGACAACAAAATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCCTTACTTGACTGTAAAACTCTCACTCTTACCGAACTTGGCCGTAACCTGCCAACCAAAGCGAGAACAAAACATAACATCAAACGAATCGACCGATTGTTAGGTAATCGTCACCTCCACAAAGAGCGACTCGCTGTATACCGTTGGCATGCTAGCTTTATCTGTTCGGGCAATACGATGCCCATTGTACTTGTTGACTGGTCTGATATCCGTGAGCAAAAACGGCTTATGGTATTGCGAGCTTCAGTCGCACTACACGGTCGTTCTGTTACTCTTTATGAGAAAGCGTTCCCGCTTTCAGAGCAATGTTCAAAGAAAGCTCATGACCAATTTCTAGCCGACCTTGCGAGCATTCTACCGAGTAACACCACACCGCTCATTGTCAGTGATGCTGGCTTTAAAGTGCCATGGTATAAATCCG</gDNA_template>
            <first_frame> L  M  N  P  L  M  I  F  I  K  I  I  K  L  R  *  I  H  I  L  S  Y  D  Q  M  V  S  P  K  I  N  N  Q  T  T  K  C  A  N  S  I  F  Y  T  T  L  F  T  N  S  A  P  N  Y  T  *  N  D  S  T  A  *  R  W  L  A  T  P  Y  L  T  V  K  L  S  L  L  P  N  L  A  V  T  C  Q  P  K  R  E  Q  N  I  T  S  N  E  S  T  D  C  *  V  I  V  T  S  T  K  S  D  S  L  Y  T  V  G  M  L  A  L  S  V  R  A  I  R  C  P  L  Y  L  L  T  G  L  I  S  V  S  K  N  G  L  W  Y  C  E  L  Q  S  H  Y  T  V  V  L  L  L  F  M  R  K  R  S  R  F  Q  S  N  V  Q  R  K  L  M  T  N  F  *  P  T  L  R  A  F  Y  R  V  T  P  H  R  S  L  S  V  M  L  A  L  K  C  H  G  I  N  P </first_frame>
            <second_frame>  *  *  I  P  *  *  F  L  S  K  S  L  S  *  G  R  Y  T  S  C  H  M  I  K  W  F  R  Q  K  S  I  I  R  Q  Q  N  V  R  T  R  Y  F  T  R  L  S  L  P  I  L  P  R  I  T  L  K  T  T  Q  Q  L  N  V  G  L  P  R  L  T  *  L  *  N  S  H  S  Y  R  T  W  P  *  P  A  N  Q  S  E  N  K  T  *  H  Q  T  N  R  P  I  V  R  *  S  S  P  P  Q  R  A  T  R  C  I  P  L  A  C  *  L  Y  L  F  G  Q  Y  D  A  H  C  T  C  *  L  V  *  Y  P  *  A  K  T  A  Y  G  I  A  S  F  S  R  T  T  R  S  F  C  Y  S  L  *  E  S  V  P  A  F  R  A  M  F  K  E  S  S  *  P  I  S  S  R  P  C  E  H  S  T  E  *  H  H  T  A  H  C  Q  *  C  W  L  *  S  A  M  V  *  I   </second_frame>
            <third_frame>   D  E  S  P  N  D  F  Y  Q  N  H  *  V  K  V  D  T  H  L  V  I  *  S  N  G  F  A  K  N  Q  *  S  D  N  K  M  C  E  L  D  I  L  H  D  S  L  Y  Q  F  C  P  E  L  H  L  K  R  L  N  S  L  T  L  A  C  H  A  L  L  D  C  K  T  L  T  L  T  E  L  G  R  N  L  P  T  K  A  R  T  K  H  N  I  K  R  I  D  R  L  L  G  N  R  H  L  H  K  E  R  L  A  V  Y  R  W  H  A  S  F  I  C  S  G  N  T  M  P  I  V  L  V  D  W  S  D  I  R  E  Q  K  R  L  M  V  L  R  A  S  V  A  L  H  G  R  S  V  T  L  Y  E  K  A  F  P  L  S  E  Q  C  S  K  K  A  H  D  Q  F  L  A  D  L  A  S  I  L  P  S  N  T  T  P  L  I  V  S  D  A  G  F  K  V  P  W  Y  K  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0226J04.1" strand="-"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="112083" stop="111559"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>525</number_coding_nucleotides>
                  <number_encoded_amino_acids>175</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SDNKMCELDILHDSLYQFCPELHLKRLNSLTLACHALLDCKTLTLTELGRNLPTKARTKHNIKRIDRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSDIREQKRLMVLRASVALHGRSVTLYEKAFPLSEQCSKKAHDQFLADLASILPSNTTPLIVSDAGFKVPWYKS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="+" PGL_start="115762" PGL_stop="117859"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="115762" e_stop="116197"/>
            <exon e_start="116428" e_stop="116652"/>
            <exon e_start="117152" e_stop="117301"/>
            <exon e_start="117393" e_stop="117470"/>
            <exon e_start="117599" e_stop="117859"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.849" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.884" acc_prob="0.961" e_score="1.000"/>
          <exon-intron don_prob="0.969" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="115762" e_stop="116197" e_length="436"/>
          </exon>
          <intron i_serial="1" don_prob="0.849" acc_prob="0.999">
            <gDNA_intron_boundary i_start="116198" i_stop="116427" i_length="230"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="116428" e_stop="116652" e_length="225"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.971">
            <gDNA_intron_boundary i_start="116653" i_stop="117151" i_length="499"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="117152" e_stop="117301" e_length="150"/>
          </exon>
          <intron i_serial="3" don_prob="0.884" acc_prob="0.961">
            <gDNA_intron_boundary i_start="117302" i_stop="117392" i_length="91"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="117393" e_stop="117470" e_length="78"/>
          </exon>
          <intron i_serial="4" don_prob="0.969" acc_prob="0.999">
            <gDNA_intron_boundary i_start="117471" i_stop="117598" i_length="128"/>
          </intron>
          <exon e_serial="5" e_score="0.992">
            <gDNA_exon_boundary e_start="117599" e_stop="117859" e_length="261"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115762" stop="116197"/>
              <exon start="116428" stop="116652"/>
              <exon start="117152" stop="117301"/>
              <exon start="117393" stop="117470"/>
              <exon start="117599" stop="117859"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U564130" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GATCACGAGTCATACTATGGGGATCGTGATACAGATAGCTTAGTCAAGGTGAGAACAATTGGGCTTGAATAAGGAAAAGAAGAAAACATTAAAAGAGGAAAACTTAAGGATGGTTAAGATTGAGAAAAAAAACAGAGCTGATCCACTTCATGCTTCCTTTTTGCAATCACAGGGCACAGCTGTTTGTACTGATTTTTCACAATGCAATGTGGCAGTTGTGTTGCATTAGATGTTATTGTATCATTTGTATCATGCCATTGAGATGACTGGTATATTTATTCTTCTGCAGATGATGGAAGATTTGGTTGCACCTATCAAGCTGGATTCTCAAACGATTACTTCAGATAATTCGTCTACCAAGCTGGAAACTGGCTTGAAAAGACCTGCTCCTGTAACTGGAGGATGCAGAATAGAAGGTTTTGTACGTGTTAAGAAG : GTTCCTGGCAACCTTGTCATATCAGCTCGTTCAGCTGCTCATTCATTTGATGCTTCTCAGATGAACATGTCACATGTAATTTCTAGCTTTTCATTTGGTAAGACAATTACTCCGAAGGTTATGAGTGATATCAAAATACTGCTACCACATTTGGGTCGAAGCCATGATAGGTTGAATGGTAACTCATATGTTACTAATCCAAGAGATTCCACAGAAAATGTTACT : ATTGAACATTTTCTTCAAGTGGTGAAAACAGAGGTGATGACAAGATCGTACAAATTAGTTGAGGAGTACGAGTACACGGCACATAGTAGTTTGGTTCATAGTCTTCACATACCAGTAGCGAAATTTCATTATGAGCCATCACCAATGCAG : GTCTTGATTACAGAAAATCCCAAGTCCTTTTCACATTTTCTTACCAATGTCTGCGCTATTATTGGTGGTGTTTTCACG : GTTGCCGGCATACTGGACTCGATTCTGCACAACACAATGAGAATGGTGAAAAAAGTTGAGCTAGGAAAGAATTTTTGAGGAGAGTAGTCTGATGATAGAAATTTAGTTTGTGCACTATAATTATACGCTTTAAAATTATACTATATTAGATATTCTCTTCGTTTACAGCAAGTCTTGAAAACATTTTTCTTGCATCAAGAGTTCTGGTGATCTGCACCAAATATATTAGTAAATTTCTCGTGCAGGCGCTTTAATTTGTGG</gDNA_template>
            <first_frame> D  H  E  S  Y  Y  G  D  R  D  T  D  S  L  V  K  V  R  T  I  G  L  E  *  G  K  E  E  N  I  K  R  G  K  L  K  D  G  *  D  *  E  K  K  Q  S  *  S  T  S  C  F  L  F  A  I  T  G  H  S  C  L  Y  *  F  F  T  M  Q  C  G  S  C  V  A  L  D  V  I  V  S  F  V  S  C  H  *  D  D  W  Y  I  Y  S  S  A  D  D  G  R  F  G  C  T  Y  Q  A  G  F  S  N  D  Y  F  R  *  F  V  Y  Q  A  G  N  W  L  E  K  T  C  S  C  N  W  R  M  Q  N  R  R  F  C  T  C  *  E   : G  S  W  Q  P  C  H  I  S  S  F  S  C  S  F  I  *  C  F  S  D  E  H  V  T  C  N  F  *  L  F  I  W  *  D  N  Y  S  E  G  Y  E  *  Y  Q  N  T  A  T  T  F  G  S  K  P  *  *  V  E  W  *  L  I  C  Y  *  S  K  R  F  H  R  K  C  Y   : Y  *  T  F  S  S  S  G  E  N  R  G  D  D  K  I  V  Q  I  S  *  G  V  R  V  H  G  T  *  *  F  G  S  *  S  S  H  T  S  S  E  I  S  L  *  A  I  T  N  A   : G  L  D  Y  R  K  S  Q  V  L  F  T  F  S  Y  Q  C  L  R  Y  Y  W  W  C  F  H   : G  C  R  H  T  G  L  D  S  A  Q  H  N  E  N  G  E  K  S  *  A  R  K  E  F  L  R  R  V  V  *  *  *  K  F  S  L  C  T  I  I  I  R  F  K  I  I  L  Y  *  I  F  S  S  F  T  A  S  L  E  N  I  F  L  A  S  R  V  L  V  I  C  T  K  Y  I  S  K  F  L  V  Q  A  L  *  F  V  </first_frame>
            <second_frame>  I  T  S  H  T  M  G  I  V  I  Q  I  A  *  S  R  *  E  Q  L  G  L  N  K  E  K  K  K  T  L  K  E  E  N  L  R  M  V  K  I  E  K  K  N  R  A  D  P  L  H  A  S  F  L  Q  S  Q  G  T  A  V  C  T  D  F  S  Q  C  N  V  A  V  V  L  H  *  M  L  L  Y  H  L  Y  H  A  I  E  M  T  G  I  F  I  L  L  Q  M  M  E  D  L  V  A  P  I  K  L  D  S  Q  T  I  T  S  D  N  S  S  T  K  L  E  T  G  L  K  R  P  A  P  V  T  G  G  C  R  I  E  G  F  V  R  V  K  K  :  V  P  G  N  L  V  I  S  A  R  S  A  A  H  S  F  D  A  S  Q  M  N  M  S  H  V  I  S  S  F  S  F  G  K  T  I  T  P  K  V  M  S  D  I  K  I  L  L  P  H  L  G  R  S  H  D  R  L  N  G  N  S  Y  V  T  N  P  R  D  S  T  E  N  V  T  :  I  E  H  F  L  Q  V  V  K  T  E  V  M  T  R  S  Y  K  L  V  E  E  Y  E  Y  T  A  H  S  S  L  V  H  S  L  H  I  P  V  A  K  F  H  Y  E  P  S  P  M  Q  :  V  L  I  T  E  N  P  K  S  F  S  H  F  L  T  N  V  C  A  I  I  G  G  V  F  T  :  V  A  G  I  L  D  S  I  L  H  N  T  M  R  M  V  K  K  V  E  L  G  K  N  F  *  G  E  *  S  D  D  R  N  L  V  C  A  L  *  L  Y  A  L  K  L  Y  Y  I  R  Y  S  L  R  L  Q  Q  V  L  K  T  F  F  L  H  Q  E  F  W  *  S  A  P  N  I  L  V  N  F  S  C  R  R  F  N  L  W </second_frame>
            <third_frame>   S  R  V  I  L  W  G  S  *  Y  R  *  L  S  Q  G  E  N  N  W  A  *  I  R  K  R  R  K  H  *  K  R  K  T  *  G  W  L  R  L  R  K  K  T  E  L  I  H  F  M  L  P  F  C  N  H  R  A  Q  L  F  V  L  I  F  H  N  A  M  W  Q  L  C  C  I  R  C  Y  C  I  I  C  I  M  P  L  R  *  L  V  Y  L  F  F  C  R  *  W  K  I  W  L  H  L  S  S  W  I  L  K  R  L  L  Q  I  I  R  L  P  S  W  K  L  A  *  K  D  L  L  L  *  L  E  D  A  E  *  K  V  L  Y  V  L  R  R :   F  L  A  T  L  S  Y  Q  L  V  Q  L  L  I  H  L  M  L  L  R  *  T  C  H  M  *  F  L  A  F  H  L  V  R  Q  L  L  R  R  L  *  V  I  S  K  Y  C  Y  H  I  W  V  E  A  M  I  G  *  M  V  T  H  M  L  L  I  Q  E  I  P  Q  K  M  L  L :   L  N  I  F  F  K  W  *  K  Q  R  *  *  Q  D  R  T  N  *  L  R  S  T  S  T  R  H  I  V  V  W  F  I  V  F  T  Y  Q  *  R  N  F  I  M  S  H  H  Q  C  R :   S  *  L  Q  K  I  P  S  P  F  H  I  F  L  P  M  S  A  L  L  L  V  V  F  S  R :   L  P  A  Y  W  T  R  F  C  T  T  Q  *  E  W  *  K  K  L  S  *  E  R  I  F  E  E  S  S  L  M  I  E  I  *  F  V  H  Y  N  Y  T  L  *  N  Y  T  I  L  D  I  L  F  V  Y  S  K  S  *  K  H  F  S  C  I  K  S  S  G  D  L  H  Q  I  Y  *  *  I  S  R  A  G  A  L  I  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0226J04.1" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="115991" stop="116197"/>
                    <exon start="116428" stop="116652"/>
                    <exon start="117152" stop="117301"/>
                    <exon start="117393" stop="117470"/>
                    <exon start="117599" stop="117676"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>735</number_coding_nucleotides>
                  <number_encoded_amino_acids>245</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MLLYHLYHAIEMTGIFILLQMMEDLVAPIKLDSQTITSDNSSTKLETGLKRPAPVTGGCRIEGFVRVKKVPGNLVISARSAAHSFDASQMNMSHVISSFSFGKTITPKVMSDIKILLPHLGRSHDRLNGNSYVTNPRDSTENVTIEHFLQVVKTEVMTRSYKLVEEYEYTAHSSLVHSLHIPVAKFHYEPSPMQVLITENPKSFSHFLTNVCAIIGGVFTVAGILDSILHNTMRMVKKVELGKNF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="-" PGL_start="120918" PGL_stop="119496"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="120918" e_stop="120630"/>
            <exon e_start="120122" e_stop="119496"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.799" acc_prob="0.996" e_score="0.990"/>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="120918" e_stop="120630" e_length="289"/>
          </exon>
          <intron i_serial="1" don_prob="0.799" acc_prob="0.996">
            <gDNA_intron_boundary i_start="120629" i_stop="120123" i_length="507"/>
          </intron>
          <exon e_serial="2" e_score="0.986">
            <gDNA_exon_boundary e_start="120122" e_stop="119496" e_length="627"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120918" stop="120630"/>
              <exon start="120122" stop="119496"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U564300" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGTTTTCTATTTCAATTTTCATCTAACATTTATTTAATTTTATTCTTTGTCTTCATTATTTTATTTTATTTTATTTTTTCCCCAATGGCTCAAATAACAAGTTCAAGATCAAATACAAAAGTTTTTTATTTTTTGGGCTTGTTCAATATTTTGTTGATGTTACAAAATGCCAACTGTTATGAGTTTAAAGTTGGAGGCTCTGGAGATTGGAGTGTCCCTATGGATGCCAATGCTAATAATTACAATCAATGGGCTGAAAGGAGTAGATTCCAAATTGGTGACACTTTAT : CTTTTAGCTACTCTGCTGATAAAGACTCAGTGCTTCTTGTAAACAAGGCAGATTTTGACAATTGCAACACTGCTTCTCCCATTGAGAAGTACAGTGATGGACAGAGTGTGGTTAAGTTTAACCACTCTGGTGCATACTTCTTCATTAGTGGTGTTCATGACAACTGTGTCAAGAATGAAAAGTTGCATCTTGTAGTCATGGCTGATAGAAGTCACAACAACCAAACAGCTTCTTCTCCTCCTCCATCCCCATCAGTAGACGAAGTTCCTCCGTCTCCGGCCCCGTCTGGTGAGGAGGCACCATCACCACCATCTGACTCAGGTGAGACCAACCAAACACCAGCTCCCTCTCAAGAATCATCTCCTCCGAAGAATGGTGCTTCGTCGACCGTTATGAGCTTTGTTGGCTCTGCTGCAGCTCTTGTTGGTTCATCCATACTGTTGGGGTTCTGATAAAAGAGATGATTGACTTGTTTGTATTTGTTTTGTTTTGATTGTTTTCATTTTTTGGGTTTTGTGTTTCATGATTTTCCTACTTTGTTCTCAGTGAATGTAGCTGAGAGTAAAAGGGTGTATTGATTTGTATTGGTTATATGTGATGAAAAATAAATAAACTAAATGTTTGTGT</gDNA_template>
            <first_frame> S  F  L  F  Q  F  S  S  N  I  Y  L  I  L  F  F  V  F  I  I  L  F  Y  F  I  F  S  P  M  A  Q  I  T  S  S  R  S  N  T  K  V  F  Y  F  L  G  L  F  N  I  L  L  M  L  Q  N  A  N  C  Y  E  F  K  V  G  G  S  G  D  W  S  V  P  M  D  A  N  A  N  N  Y  N  Q  W  A  E  R  S  R  F  Q  I  G  D  T  L   : S  F  S  Y  S  A  D  K  D  S  V  L  L  V  N  K  A  D  F  D  N  C  N  T  A  S  P  I  E  K  Y  S  D  G  Q  S  V  V  K  F  N  H  S  G  A  Y  F  F  I  S  G  V  H  D  N  C  V  K  N  E  K  L  H  L  V  V  M  A  D  R  S  H  N  N  Q  T  A  S  S  P  P  P  S  P  S  V  D  E  V  P  P  S  P  A  P  S  G  E  E  A  P  S  P  P  S  D  S  G  E  T  N  Q  T  P  A  P  S  Q  E  S  S  P  P  K  N  G  A  S  S  T  V  M  S  F  V  G  S  A  A  A  L  V  G  S  S  I  L  L  G  F  *  *  K  R  *  L  T  C  L  Y  L  F  C  F  D  C  F  H  F  L  G  F  V  F  H  D  F  P  T  L  F  S  V  N  V  A  E  S  K  R  V  Y  *  F  V  L  V  I  C  D  E  K  *  I  N  *  M  F  V  </first_frame>
            <second_frame>  V  F  Y  F  N  F  H  L  T  F  I  *  F  Y  S  L  S  S  L  F  Y  F  I  L  F  F  P  Q  W  L  K  *  Q  V  Q  D  Q  I  Q  K  F  F  I  F  W  A  C  S  I  F  C  *  C  Y  K  M  P  T  V  M  S  L  K  L  E  A  L  E  I  G  V  S  L  W  M  P  M  L  I  I  T  I  N  G  L  K  G  V  D  S  K  L  V  T  L  Y  :  L  L  A  T  L  L  I  K  T  Q  C  F  L  *  T  R  Q  I  L  T  I  A  T  L  L  L  P  L  R  S  T  V  M  D  R  V  W  L  S  L  T  T  L  V  H  T  S  S  L  V  V  F  M  T  T  V  S  R  M  K  S  C  I  L  *  S  W  L  I  E  V  T  T  T  K  Q  L  L  L  L  L  H  P  H  Q  *  T  K  F  L  R  L  R  P  R  L  V  R  R  H  H  H  H  H  L  T  Q  V  R  P  T  K  H  Q  L  P  L  K  N  H  L  L  R  R  M  V  L  R  R  P  L  *  A  L  L  A  L  L  Q  L  L  L  V  H  P  Y  C  W  G  S  D  K  R  D  D  *  L  V  C  I  C  F  V  L  I  V  F  I  F  W  V  L  C  F  M  I  F  L  L  C  S  Q  *  M  *  L  R  V  K  G  C  I  D  L  Y  W  L  Y  V  M  K  N  K  *  T  K  C  L  C </second_frame>
            <third_frame>   F  S  I  S  I  F  I  *  H  L  F  N  F  I  L  C  L  H  Y  F  I  L  F  Y  F  F  P  N  G  S  N  N  K  F  K  I  K  Y  K  S  F  L  F  F  G  L  V  Q  Y  F  V  D  V  T  K  C  Q  L  L  *  V  *  S  W  R  L  W  R  L  E  C  P  Y  G  C  Q  C  *  *  L  Q  S  M  G  *  K  E  *  I  P  N  W  *  H  F  I :   F  *  L  L  C  *  *  R  L  S  A  S  C  K  Q  G  R  F  *  Q  L  Q  H  C  F  S  H  *  E  V  Q  *  W  T  E  C  G  *  V  *  P  L  W  C  I  L  L  H  *  W  C  S  *  Q  L  C  Q  E  *  K  V  A  S  C  S  H  G  *  *  K  S  Q  Q  P  N  S  F  F  S  S  S  I  P  I  S  R  R  S  S  S  V  S  G  P  V  W  *  G  G  T  I  T  T  I  *  L  R  *  D  Q  P  N  T  S  S  L  S  R  I  I  S  S  E  E  W  C  F  V  D  R  Y  E  L  C  W  L  C  C  S  S  C  W  F  I  H  T  V  G  V  L  I  K  E  M  I  D  L  F  V  F  V  L  F  *  L  F  S  F  F  G  F  C  V  S  *  F  S  Y  F  V  L  S  E  C  S  *  E  *  K  G  V  L  I  C  I  G  Y  M  *  *  K  I  N  K  L  N  V  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0226J04.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="120918" stop="120630"/>
                    <exon start="120122" stop="119671"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>738</number_coding_nucleotides>
                  <number_encoded_amino_acids>246</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFLFQFSSNIYLILFFVFIILFYFIFSPMAQITSSRSNTKVFYFLGLFNILLMLQNANCYEFKVGGSGDWSVPMDANANNYNQWAERSRFQIGDTLSFSYSADKDSVLLVNKADFDNCNTASPIEKYSDGQSVVKFNHSGAYFFISGVHDNCVKNEKLHLVVMADRSHNNQTASSPPPSPSVDEVPPSPAPSGEEAPSPPSDSGETNQTPAPSQESSPPKNGASSTVMSFVGSAAALVGSSILLGF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="+" PGL_start="122353" PGL_stop="125217"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="122353" e_stop="122754"/>
            <exon e_start="124132" e_stop="124227"/>
            <exon e_start="124440" e_stop="124543"/>
            <exon e_start="125049" e_stop="125217"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.975" acc_prob="0.999" e_score="0.980"/>
          <exon-intron don_prob="0.988" acc_prob="0.039" e_score="0.990"/>
          <exon-intron don_prob="1.000" acc_prob="0.994" e_score="0.942"/>
          <exon-only e_score="0.982"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.980">
            <gDNA_exon_boundary e_start="122353" e_stop="122754" e_length="402"/>
          </exon>
          <intron i_serial="1" don_prob="0.975" acc_prob="0.999">
            <gDNA_intron_boundary i_start="122755" i_stop="124131" i_length="1377"/>
          </intron>
          <exon e_serial="2" e_score="0.990">
            <gDNA_exon_boundary e_start="124132" e_stop="124227" e_length="96"/>
          </exon>
          <intron i_serial="2" don_prob="0.988" acc_prob="0.039">
            <gDNA_intron_boundary i_start="124228" i_stop="124439" i_length="212"/>
          </intron>
          <exon e_serial="3" e_score="0.942">
            <gDNA_exon_boundary e_start="124440" e_stop="124543" e_length="104"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.994">
            <gDNA_intron_boundary i_start="124544" i_stop="125048" i_length="505"/>
          </intron>
          <exon e_serial="4" e_score="0.982">
            <gDNA_exon_boundary e_start="125049" e_stop="125217" e_length="169"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="122353" stop="122754"/>
              <exon start="124132" stop="124227"/>
              <exon start="124440" stop="124543"/>
              <exon start="125049" stop="125217"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U567879" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCCTCGTTAGCTCTGACTGTGAAATTGTCACCACCAGAATACTCAAAACTGTAAAACACCATTCTTACCCAAAAAAAGAAAAAGAAAGTTTAGCTAAGTATTTGGCAATTAGGAAAAAGATCAAATTTTTATGTTGATTATAATGTGTTTCTTGAATTTCTGTCAAATGGGTAGCTAGAAAAACAAGTTTTATGATCTGGGGTTGTCTCATTTTTGTTTTTCTTGTTGAAAATCTGATCTGGGTTCTTGAGCTGCAGCTGTTGGGTTTCCAAGATTGTTTTTTTTTTTGTTTGGTTTGAGGAGTTTTCAAGAATGTGGAGGGACCCTGGAGCTCCTGCTGATTCTTTCTACCAGGTTCGCCCTGAATGTACAAATGTTCCAAAAACAAGATTTAGAATCAAG : GCTGGGAAAACCTTAAGTGCAAGGAAATGGCGTGCTGCATTTACATCAGAAGGTTATCTTGACATTGGCAAAACACTGAGTCGAATTTATCGTGGG : GGGATTCATCCATCAATTAGAGGTGAAGTTTGGGAATTTTTATTGGGTTGTTATGATCCAAAGAGCACATTTGAAGAACGAGAGCAGATACGACAACGGAGGAG : GGTCCAGTATGCTGTACTGAAAGAAGAATGTCACGCAATGTTTCCCATGATTGGAAGTGGTAGTTTTATTACTGCACCTGTAATTACTGAAAATGGTGACCCTATAGTAGATCCTATTACTCTCCAAGAGGCACAAGCAGCAAAAGAATTATATTCAGGTGGTCAACAA</gDNA_template>
            <first_frame> S  S  L  A  L  T  V  K  L  S  P  P  E  Y  S  K  L  *  N  T  I  L  T  Q  K  K  K  K  K  V  *  L  S  I  W  Q  L  G  K  R  S  N  F  Y  V  D  Y  N  V  F  L  E  F  L  S  N  G  *  L  E  K  Q  V  L  *  S  G  V  V  S  F  L  F  F  L  L  K  I  *  S  G  F  L  S  C  S  C  W  V  S  K  I  V  F  F  F  V  W  F  E  E  F  S  R  M  W  R  D  P  G  A  P  A  D  S  F  Y  Q  V  R  P  E  C  T  N  V  P  K  T  R  F  R  I  K  :  A  G  K  T  L  S  A  R  K  W  R  A  A  F  T  S  E  G  Y  L  D  I  G  K  T  L  S  R  I  Y  R  G  :  G  I  H  P  S  I  R  G  E  V  W  E  F  L  L  G  C  Y  D  P  K  S  T  F  E  E  R  E  Q  I  R  Q  R  R  R :   V  Q  Y  A  V  L  K  E  E  C  H  A  M  F  P  M  I  G  S  G  S  F  I  T  A  P  V  I  T  E  N  G  D  P  I  V  D  P  I  T  L  Q  E  A  Q  A  A  K  E  L  Y  S  G  G  Q  Q </first_frame>
            <second_frame>  P  R  *  L  *  L  *  N  C  H  H  Q  N  T  Q  N  C  K  T  P  F  L  P  K  K  R  K  R  K  F  S  *  V  F  G  N  *  E  K  D  Q  I  F  M  L  I  I  M  C  F  L  N  F  C  Q  M  G  S  *  K  N  K  F  Y  D  L  G  L  S  H  F  C  F  S  C  *  K  S  D  L  G  S  *  A  A  A  V  G  F  P  R  L  F  F  F  L  F  G  L  R  S  F  Q  E  C  G  G  T  L  E  L  L  L  I  L  S  T  R  F  A  L  N  V  Q  M  F  Q  K  Q  D  L  E  S  R :   L  G  K  P  *  V  Q  G  N  G  V  L  H  L  H  Q  K  V  I  L  T  L  A  K  H  *  V  E  F  I  V  G :   G  F  I  H  Q  L  E  V  K  F  G  N  F  Y  W  V  V  M  I  Q  R  A  H  L  K  N  E  S  R  Y  D  N  G  G   : G  S  S  M  L  Y  *  K  K  N  V  T  Q  C  F  P  *  L  E  V  V  V  L  L  L  H  L  *  L  L  K  M  V  T  L  *  *  I  L  L  L  S  K  R  H  K  Q  Q  K  N  Y  I  Q  V  V  N   </second_frame>
            <third_frame>   L  V  S  S  D  C  E  I  V  T  T  R  I  L  K  T  V  K  H  H  S  Y  P  K  K  E  K  E  S  L  A  K  Y  L  A  I  R  K  K  I  K  F  L  C  *  L  *  C  V  S  *  I  S  V  K  W  V  A  R  K  T  S  F  M  I  W  G  C  L  I  F  V  F  L  V  E  N  L  I  W  V  L  E  L  Q  L  L  G  F  Q  D  C  F  F  F  C  L  V  *  G  V  F  K  N  V  E  G  P  W  S  S  C  *  F  F  L  P  G  S  P  *  M  Y  K  C  S  K  N  K  I  *  N  Q   : G  W  E  N  L  K  C  K  E  M  A  C  C  I  Y  I  R  R  L  S  *  H  W  Q  N  T  E  S  N  L  S  W   : G  D  S  S  I  N  *  R  *  S  L  G  I  F  I  G  L  L  *  S  K  E  H  I  *  R  T  R  A  D  T  T  T  E  E  :  G  P  V  C  C  T  E  R  R  M  S  R  N  V  S  H  D  W  K  W  *  F  Y  Y  C  T  C  N  Y  *  K  W  *  P  Y  S  R  S  Y  Y  S  P  R  G  T  S  S  K  R  I  I  F  R  W  S  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0226J04.1" strand="+"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="122590" stop="122754"/>
                    <exon start="124132" stop="124227"/>
                    <exon start="124440" stop="124543"/>
                    <exon start="125049" stop="125217"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>534</number_coding_nucleotides>
                  <number_encoded_amino_acids>178</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SGFLSCSCWVSKIVFFFVWFEEFSRMWRDPGAPADSFYQVRPECTNVPKTRFRIKAGKTLSARKWRAAFTSEGYLDIGKTLSRIYRGGIHPSIRGEVWEFLLGCYDPKSTFEEREQIRQRRRVQYAVLKEECHAMFPMIGSGSFITAPVITENGDPIVDPITLQEAQAAKELYSGGQQ</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="+" PGL_start="126594" PGL_stop="127784"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="126594" e_stop="126661"/>
            <exon e_start="126749" e_stop="126846"/>
            <exon e_start="126916" e_stop="127176"/>
            <exon e_start="127267" e_stop="127350"/>
            <exon e_start="127537" e_stop="127784"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.979" e_score="0.941"/>
          <exon-intron don_prob="0.990" acc_prob="0.960" e_score="1.000"/>
          <exon-intron don_prob="0.847" acc_prob="0.983" e_score="0.985"/>
          <exon-intron don_prob="0.969" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="0.956"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.941">
            <gDNA_exon_boundary e_start="126594" e_stop="126661" e_length="68"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.979">
            <gDNA_intron_boundary i_start="126662" i_stop="126748" i_length="87"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="126749" e_stop="126846" e_length="98"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.960">
            <gDNA_intron_boundary i_start="126847" i_stop="126915" i_length="69"/>
          </intron>
          <exon e_serial="3" e_score="0.985">
            <gDNA_exon_boundary e_start="126916" e_stop="127176" e_length="261"/>
          </exon>
          <intron i_serial="3" don_prob="0.847" acc_prob="0.983">
            <gDNA_intron_boundary i_start="127177" i_stop="127266" i_length="90"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="127267" e_stop="127350" e_length="84"/>
          </exon>
          <intron i_serial="4" don_prob="0.969" acc_prob="0.997">
            <gDNA_intron_boundary i_start="127351" i_stop="127536" i_length="186"/>
          </intron>
          <exon e_serial="5" e_score="0.956">
            <gDNA_exon_boundary e_start="127537" e_stop="127784" e_length="248"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126594" stop="126661"/>
              <exon start="126749" stop="126846"/>
              <exon start="126916" stop="127176"/>
              <exon start="127267" stop="127350"/>
              <exon start="127537" stop="127784"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U602828" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAAGCTCAGCTGAGTAATCTTGCTTCAGTAACACAAGTTATTGACCCTAAACTTCATCACCACTTAG : AGACATTAGGTGGAGGTGATTACCTATTTGCTATCCGTATGCTCATGGTTTTGTTCCGTCGAGAATTCTCTTTTGCTGATTCATTATATCTTTGGGAG : ATGATGTGGGCGTTGGAATACGATCCCGACTTGTTTCTTATGTATGAAGACCCTGACTTAGCTGCTGCAAAATCTGAAGGATCTAAAGGAAGAGCAAAATCAACACGCCAGTGTGGGAAATTTGAGAGAGAAAATCTGAAAAATCGAAGCAAAGGTACTGAAGCTCCACTCCCAATTTCCGTTTTCCTAGTAGCCAGTGTCCTCAAGGACAAGAGCACAAAGTTGCTTACAGAAGCTAAAGGACTAGACGACGTTGTTCAG : ATACTGAATGACATGACTGGAAACCTGGACGCGAAGAAGGCTTGCACTAGTGCAATGAAACTTCACAAGAAATATCTCAAAAAG : GCAGCCAATGCCAACAGGTAACAAAACACAAAAGCCAAAGAAAGCGCGTTACGCAATTCATAAGCCATGAAGGTAATGTAAAAATGAAGCTTGTGATGGTACTTCCCCTGTTCAACGTTGCAACAGTGTTGCTACAGGGTAAGAATCCTATCGCGATTTTCGATATTTGATTCAGGTATTTTTGGTTATGTTGAGGAAGAGGTACTGTTTTCGAATACATTACTATGGCTTGATTTATTGAAGCCAAT</gDNA_template>
            <first_frame> R  S  S  A  E  *  S  C  F  S  N  T  S  Y  *  P  *  T  S  S  P  L  R :   D  I  R  W  R  *  L  P  I  C  Y  P  Y  A  H  G  F  V  P  S  R  I  L  F  C  *  F  I  I  S  L  G   : D  D  V  G  V  G  I  R  S  R  L  V  S  Y  V  *  R  P  *  L  S  C  C  K  I  *  R  I  *  R  K  S  K  I  N  T  P  V  W  E  I  *  E  R  K  S  E  K  S  K  Q  R  Y  *  S  S  T  P  N  F  R  F  P  S  S  Q  C  P  Q  G  Q  E  H  K  V  A  Y  R  S  *  R  T  R  R  R  C  S   : D  T  E  *  H  D  W  K  P  G  R  E  E  G  L  H  *  C  N  E  T  S  Q  E  I  S  Q  K   : G  S  Q  C  Q  Q  V  T  K  H  K  S  Q  R  K  R  V  T  Q  F  I  S  H  E  G  N  V  K  M  K  L  V  M  V  L  P  L  F  N  V  A  T  V  L  L  Q  G  K  N  P  I  A  I  F  D  I  *  F  R  Y  F  W  L  C  *  G  R  G  T  V  F  E  Y  I  T  M  A  *  F  I  E  A  N </first_frame>
            <second_frame>  E  A  Q  L  S  N  L  A  S  V  T  Q  V  I  D  P  K  L  H  H  H  L   : E  T  L  G  G  G  D  Y  L  F  A  I  R  M  L  M  V  L  F  R  R  E  F  S  F  A  D  S  L  Y  L  W  E  :  M  M  W  A  L  E  Y  D  P  D  L  F  L  M  Y  E  D  P  D  L  A  A  A  K  S  E  G  S  K  G  R  A  K  S  T  R  Q  C  G  K  F  E  R  E  N  L  K  N  R  S  K  G  T  E  A  P  L  P  I  S  V  F  L  V  A  S  V  L  K  D  K  S  T  K  L  L  T  E  A  K  G  L  D  D  V  V  Q  :  I  L  N  D  M  T  G  N  L  D  A  K  K  A  C  T  S  A  M  K  L  H  K  K  Y  L  K  K  :  A  A  N  A  N  R  *  Q  N  T  K  A  K  E  S  A  L  R  N  S  *  A  M  K  V  M  *  K  *  S  L  *  W  Y  F  P  C  S  T  L  Q  Q  C  C  Y  R  V  R  I  L  S  R  F  S  I  F  D  S  G  I  F  G  Y  V  E  E  E  V  L  F  S  N  T  L  L  W  L  D  L  L  K  P   </second_frame>
            <third_frame>   K  L  S  *  V  I  L  L  Q  *  H  K  L  L  T  L  N  F  I  T  T  *  :  R  H  *  V  E  V  I  T  Y  L  L  S  V  C  S  W  F  C  S  V  E  N  S  L  L  L  I  H  Y  I  F  G  R :   *  C  G  R  W  N  T  I  P  T  C  F  L  C  M  K  T  L  T  *  L  L  Q  N  L  K  D  L  K  E  E  Q  N  Q  H  A  S  V  G  N  L  R  E  K  I  *  K  I  E  A  K  V  L  K  L  H  S  Q  F  P  F  S  *  *  P  V  S  S  R  T  R  A  Q  S  C  L  Q  K  L  K  D  *  T  T  L  F  R :   Y  *  M  T  *  L  E  T  W  T  R  R  R  L  A  L  V  Q  *  N  F  T  R  N  I  S  K  R :   Q  P  M  P  T  G  N  K  T  Q  K  P  K  K  A  R  Y  A  I  H  K  P  *  R  *  C  K  N  E  A  C  D  G  T  S  P  V  Q  R  C  N  S  V  A  T  G  *  E  S  Y  R  D  F  R  Y  L  I  Q  V  F  L  V  M  L  R  K  R  Y  C  F  R  I  H  Y  Y  G  L  I  Y  *  S  Q  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0226J04.1" strand="+"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="126595" stop="126661"/>
                    <exon start="126749" stop="126846"/>
                    <exon start="126916" stop="127176"/>
                    <exon start="127267" stop="127350"/>
                    <exon start="127537" stop="127557"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>528</number_coding_nucleotides>
                  <number_encoded_amino_acids>176</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EAQLSNLASVTQVIDPKLHHHLETLGGGDYLFAIRMLMVLFRREFSFADSLYLWEMMWALEYDPDLFLMYEDPDLAAAKSEGSKGRAKSTRQCGKFERENLKNRSKGTEAPLPISVFLVASVLKDKSTKLLTEAKGLDDVVQILNDMTGNLDAKKACTSAMKLHKKYLKKAANANR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="21" PGL_strand="-" PGL_start="134940" PGL_stop="133949"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="134940" e_stop="134741"/>
            <exon e_start="134371" e_stop="133949"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.973" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="134940" e_stop="134741" e_length="200"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.973">
            <gDNA_intron_boundary i_start="134740" i_stop="134372" i_length="369"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="134371" e_stop="133949" e_length="423"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="134940" stop="134741"/>
              <exon start="134371" stop="133949"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U576426" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CATCACAAACACTTGCAAATTGCAATTAATTACCAAAAGTAATTAGCCATGGGGAATATTTCACTTGTTGCTGCTCTTTTATTGTGCTTGTTAGCATTCGCAAATGCTAACACGTTCTCCGTTACAGTATCTGTGACGGAGAACGACAATCCACAAAGCTGTCAAGAGCAGATTCAGAGTCAGAGACTCAATCACTGCAG : GATGTATATTTCAAGAAGCCACCAATACTTTAACGACGAGTTGAGCATGGTAACAGATGACGATCATGAGATCAACCAAACCCAAGAACATCTCCAACAATGTTGCCAAGAATTGAGGAACATGGACACTCAATGCCGATGCCCGGCGCTTAAGAAAATGGTGATGCAGGATTGCGGTAGACAAGGCGAAGAGGCGCAACGTATGTTAGGGAAAGCTCGTTATATTCCGCGTATGTGTAACATTCAACCCGCTCAATGTAGCTTCTAATTGATATAGAAGCTCGATCAGTATAAAAAATTACGTTGAAAGTACTATAATAATGAACACACAATCGTGTGTATGTATGGGAATTAAGCAAGGGTTAATTTGGTTTTATCTTATGGGAAATGAAAGAGACTTGAGACTTGTTTTATATGCTTGTT</gDNA_template>
            <first_frame> H  H  K  H  L  Q  I  A  I  N  Y  Q  K  *  L  A  M  G  N  I  S  L  V  A  A  L  L  L  C  L  L  A  F  A  N  A  N  T  F  S  V  T  V  S  V  T  E  N  D  N  P  Q  S  C  Q  E  Q  I  Q  S  Q  R  L  N  H  C  R :   M  Y  I  S  R  S  H  Q  Y  F  N  D  E  L  S  M  V  T  D  D  D  H  E  I  N  Q  T  Q  E  H  L  Q  Q  C  C  Q  E  L  R  N  M  D  T  Q  C  R  C  P  A  L  K  K  M  V  M  Q  D  C  G  R  Q  G  E  E  A  Q  R  M  L  G  K  A  R  Y  I  P  R  M  C  N  I  Q  P  A  Q  C  S  F  *  L  I  *  K  L  D  Q  Y  K  K  L  R  *  K  Y  Y  N  N  E  H  T  I  V  C  M  Y  G  N  *  A  R  V  N  L  V  L  S  Y  G  K  *  K  R  L  E  T  C  F  I  C  L   </first_frame>
            <second_frame>  I  T  N  T  C  K  L  Q  L  I  T  K  S  N  *  P  W  G  I  F  H  L  L  L  L  F  Y  C  A  C  *  H  S  Q  M  L  T  R  S  P  L  Q  Y  L  *  R  R  T  T  I  H  K  A  V  K  S  R  F  R  V  R  D  S  I  T  A   : G  C  I  F  Q  E  A  T  N  T  L  T  T  S  *  A  W  *  Q  M  T  I  M  R  S  T  K  P  K  N  I  S  N  N  V  A  K  N  *  G  T  W  T  L  N  A  D  A  R  R  L  R  K  W  *  C  R  I  A  V  D  K  A  K  R  R  N  V  C  *  G  K  L  V  I  F  R  V  C  V  T  F  N  P  L  N  V  A  S  N  *  Y  R  S  S  I  S  I  K  N  Y  V  E  S  T  I  I  M  N  T  Q  S  C  V  C  M  G  I  K  Q  G  L  I  W  F  Y  L  M  G  N  E  R  D  L  R  L  V  L  Y  A  C  </second_frame>
            <third_frame>   S  Q  T  L  A  N  C  N  *  L  P  K  V  I  S  H  G  E  Y  F  T  C  C  C  S  F  I  V  L  V  S  I  R  K  C  *  H  V  L  R  Y  S  I  C  D  G  E  R  Q  S  T  K  L  S  R  A  D  S  E  S  E  T  Q  S  L  Q  :  D  V  Y  F  K  K  P  P  I  L  *  R  R  V  E  H  G  N  R  *  R  S  *  D  Q  P  N  P  R  T  S  P  T  M  L  P  R  I  E  E  H  G  H  S  M  P  M  P  G  A  *  E  N  G  D  A  G  L  R  *  T  R  R  R  G  A  T  Y  V  R  E  S  S  L  Y  S  A  Y  V  *  H  S  T  R  S  M  *  L  L  I  D  I  E  A  R  S  V  *  K  I  T  L  K  V  L  *  *  *  T  H  N  R  V  Y  V  W  E  L  S  K  G  *  F  G  F  I  L  W  E  M  K  E  T  *  D  L  F  Y  M  L  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0226J04.1" strand="-"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="134898" stop="134741"/>
                    <exon start="134371" stop="134104"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>423</number_coding_nucleotides>
                  <number_encoded_amino_acids>141</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LAMGNISLVAALLLCLLAFANANTFSVTVSVTENDNPQSCQEQIQSQRLNHCRMYISRSHQYFNDELSMVTDDDHEINQTQEHLQQCCQELRNMDTQCRCPALKKMVMQDCGRQGEEAQRMLGKARYIPRMCNIQPAQCSF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="22" PGL_strand="-" PGL_start="138370" PGL_stop="135813"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="138370" e_stop="137625"/>
            <exon e_start="137531" e_stop="135813"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.945" acc_prob="0.982" e_score="0.977"/>
          <exon-only e_score="0.962"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.977">
            <gDNA_exon_boundary e_start="138370" e_stop="137625" e_length="746"/>
          </exon>
          <intron i_serial="1" don_prob="0.945" acc_prob="0.982">
            <gDNA_intron_boundary i_start="137624" i_stop="137532" i_length="93"/>
          </intron>
          <exon e_serial="2" e_score="0.962">
            <gDNA_exon_boundary e_start="137531" e_stop="135813" e_length="1719"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138370" stop="137625"/>
              <exon start="137531" stop="135813"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U575311" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="136264" stop="135813"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U575310" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTCTATTTTCGTCCATTTTTTCCCCTTACCACCCCACGCCGTTGTGTCATTTCACACAACGGCATTAGCTGGTGATCATCGATCACCGGTCTCTTCTGGTTTCATCATTCCCGTGAATGTGATCGCAAACAAAGTCATTTAAAAACAAAATCCCAGATATATTCCTCCATAATTAAAGGAATGCAAATTCCATGGAGGAATATCTCTTGGGTCGTACTAGTTTTGGTTGCGTGCAGTTATCAAACATGTAACGGGCAGGATTACGGAGGAGACGAAAAAACGGTAGCAGCACCGCCACCGGAGCAAGAGAATTGCGATGGAATCTTCATCACCTATAATTTCGATGGACGAGAAAAGATATATCCATTAGTGAAGAATGTATCCGCACAGGGATGGTCATTCAAGTCGATGTTAACGGTGTTGAATGCCGGAACTTTTGAGCTGAAATCATGGCAAGTTTTCATCGGATTTCAGCATAACGAGCTTTTAGTATCGGCGGACGGTGCAGTTGCAATTGACGGCGATGGATTTCCGGTACGGGTGGGTAAAAATGGTACAACATTGGCTGGGTATCCACAATCCGATTTGAAAACGGCGATTGATACCGCCGGTGATTTTACTCAGATGTCAGCTCAAATCAATATTAAGGGGACGCAATTTGGTCTTAGAGAGAAAACAAATCCAATGCCTTCAACAATCAAGCTCGTCAATGAAGGATACAAATGCCCTGCTCCTAAGCGCTATA : AAAGTTACATGCATGTCTGTTGCAAGAGGGATCTTAAATTCAAGCCTAAGAAGGTGGTTACCAAGTTCATGCCTCGTCGTTATGGAGATCTTTCCATAACTTACGATGTTCTATCAGCATTCACGAATAGGTATCAGGCTCAAGTCACACTCGACAATCTGAATCCTTTGGGTCGTCTTGATCATTGGAACTTAACGTGGGAGTGGATGAGGAACGAGTTCATTAACACAATTAAAGGCGCGCATACTCACAAAATTGATCCTTCTGAATGTATTTACGGACCACAAGGACAATATTACAAGGATTTCGATTTCACTCCTGTGATAAATTGCCAAAAGAAACCAATCATTTCCGATTTACCTAAGGAGAAAGCAAACGATGACAAATTTGGGAAGTTGCCTTATTGTTGTAGAAACGGAACTCTTTTGTCACCTATAATGAACGAAACAGAAGCAAGGTCGATTTTCCAGATGGAAGTTTTCAAACTTCCCCCTGATTTAAACAGAACCGCGTTAAATCCACCTCAAAACTGGAAAATCACGGGCACAATTAACCCGTCTTATTCATGTGGACCGCCAGTCAGAATTGATCCATCAGTATTCCCGGATCCTAAAGGAATCGGAATTGCTACTGCTGTTGCTAGTTGGCAAATTACTTGTAACATTACGCGTCCTAAGCCCAAAGCAGCCAAATGTTGTGTTTCTTTTTCGGCTTATTATGCTGCATCCGTTATCCCCTGCAACACTTGCGCTTGTGGCTGTGAAGAGACGTCTAAATGTGACGCGAACAAAAAGCCACTACTTCTCCCTCCAGAAGCGCTACTCGTCCCTTTTGAAAATAGGGACTTAATGGCGAAAGCTTGGAGCAATATCAAACATCTTGGCCCTATGCCTAAGAAACTACCTTGTCCTGATAATTGCGGAGTGAGCATCAATTGGCATGTGGATAGTAACTATAAAACAGGATGGACTGCGCGTATAACGCTCTTTAACTGGGGAAATGACGCGTTTGAAAACTGGTTTTCCGCTATCCAAATGAAGAAAGATGTAGCTAATGGCTATGAAAACGTGTACTCGTTTAACGGTACAAGGTTACCTAAAGAAAAGAGTAACACTATATTTATGCAAGGTTTACCTGGTTTGAAATTCTTGGTTGGAGAGGTTAATGGGACTAATCCTAATAAGGATCCAAGAGTACCTGGAAAACAACAATCAATTATTTCATTTTTGAAGAAGAATACACCACATATCAACGTCGATGCTGGCGATGGATTCCCTTCTAAGATATTCTTTAATGGTGAAGAATGCGCGCTTCCACCAGAGTTTCCTAAAAACACTGCAGCATTCAAATCCAAATTTGGTGTTTTTCCAGCAGTTTTGCTTGCTCTCTTAACTTTCTTTCTTTTGACGGATAGGTTACACTGATAGTATCATTCAACCTGATGATATATGACTTAAACTCTTTCTTTACTATACTTTGTGGTGCACTAGCTTGTAACTACTATTCTTCTGTCTCATTTTACGTGGCACATTTTTAGTATGGTCACATTTCTATATACATTATTACATTGAGCTTTGAAGTTGAAGAGTAATGTAATCAAGTTATGACAGCAAAATGAAGAAAGAAAGAAAAAAAAATGTTGGTATGATCATGTCTTTGTTTACGTCTCTTTAAATTTATATGATCAAATGAGAAGTATCTTTTTCATGTTTATTAATG</gDNA_template>
            <first_frame> S  L  F  S  S  I  F  S  P  Y  H  P  T  P  L  C  H  F  T  Q  R  H  *  L  V  I  I  D  H  R  S  L  L  V  S  S  F  P  *  M  *  S  Q  T  K  S  F  K  N  K  I  P  D  I  F  L  H  N  *  R  N  A  N  S  M  E  E  Y  L  L  G  R  T  S  F  G  C  V  Q  L  S  N  M  *  R  A  G  L  R  R  R  R  K  N  G  S  S  T  A  T  G  A  R  E  L  R  W  N  L  H  H  L  *  F  R  W  T  R  K  D  I  S  I  S  E  E  C  I  R  T  G  M  V  I  Q  V  D  V  N  G  V  E  C  R  N  F  *  A  E  I  M  A  S  F  H  R  I  S  A  *  R  A  F  S  I  G  G  R  C  S  C  N  *  R  R  W  I  S  G  T  G  G  *  K  W  Y  N  I  G  W  V  S  T  I  R  F  E  N  G  D  *  Y  R  R  *  F  Y  S  D  V  S  S  N  Q  Y  *  G  D  A  I  W  S  *  R  E  N  K  S  N  A  F  N  N  Q  A  R  Q  *  R  I  Q  M  P  C  S  *  A  L  * :   K  L  H  A  C  L  L  Q  E  G  S  *  I  Q  A  *  E  G  G  Y  Q  V  H  A  S  S  L  W  R  S  F  H  N  L  R  C  S  I  S  I  H  E  *  V  S  G  S  S  H  T  R  Q  S  E  S  F  G  S  S  *  S  L  E  L  N  V  G  V  D  E  E  R  V  H  *  H  N  *  R  R  A  Y  S  Q  N  *  S  F  *  M  Y  L  R  T  T  R  T  I  L  Q  G  F  R  F  H  S  C  D  K  L  P  K  E  T  N  H  F  R  F  T  *  G  E  S  K  R  *  Q  I  W  E  V  A  L  L  L  *  K  R  N  S  F  V  T  Y  N  E  R  N  R  S  K  V  D  F  P  D  G  S  F  Q  T  S  P  *  F  K  Q  N  R  V  K  S  T  S  K  L  E  N  H  G  H  N  *  P  V  L  F  M  W  T  A  S  Q  N  *  S  I  S  I  P  G  S  *  R  N  R  N  C  Y  C  C  C  *  L  A  N  Y  L  *  H  Y  A  S  *  A  Q  S  S  Q  M  L  C  F  F  F  G  L  L  C  C  I  R  Y  P  L  Q  H  L  R  L  W  L  *  R  D  V  *  M  *  R  E  Q  K  A  T  T  S  P  S  R  S  A  T  R  P  F  *  K  *  G  L  N  G  E  S  L  E  Q  Y  Q  T  S  W  P  Y  A  *  E  T  T  L  S  *  *  L  R  S  E  H  Q  L  A  C  G  *  *  L  *  N  R  M  D  C  A  Y  N  A  L  *  L  G  K  *  R  V  *  K  L  V  F  R  Y  P  N  E  E  R  C  S  *  W  L  *  K  R  V  L  V  *  R  Y  K  V  T  *  R  K  E  *  H  Y  I  Y  A  R  F  T  W  F  E  I  L  G  W  R  G  *  W  D  *  S  *  *  G  S  K  S  T  W  K  T  T  I  N  Y  F  I  F  E  E  E  Y  T  T  Y  Q  R  R  C  W  R  W  I  P  F  *  D  I  L  *  W  *  R  M  R  A  S  T  R  V  S  *  K  H  C  S  I  Q  I  Q  I  W  C  F  S  S  S  F  A  C  S  L  N  F  L  S  F  D  G  *  V  T  L  I  V  S  F  N  L  M  I  Y  D  L  N  S  F  F  T  I  L  C  G  A  L  A  C  N  Y  Y  S  S  V  S  F  Y  V  A  H  F  *  Y  G  H  I  S  I  Y  I  I  T  L  S  F  E  V  E  E  *  C  N  Q  V  M  T  A  K  *  R  K  K  E  K  K  M  L  V  *  S  C  L  C  L  R  L  F  K  F  I  *  S  N  E  K  Y  L  F  H  V  Y  *   </first_frame>
            <second_frame>  L  Y  F  R  P  F  F  P  L  T  T  P  R  R  C  V  I  S  H  N  G  I  S  W  *  S  S  I  T  G  L  F  W  F  H  H  S  R  E  C  D  R  K  Q  S  H  L  K  T  K  S  Q  I  Y  S  S  I  I  K  G  M  Q  I  P  W  R  N  I  S  W  V  V  L  V  L  V  A  C  S  Y  Q  T  C  N  G  Q  D  Y  G  G  D  E  K  T  V  A  A  P  P  P  E  Q  E  N  C  D  G  I  F  I  T  Y  N  F  D  G  R  E  K  I  Y  P  L  V  K  N  V  S  A  Q  G  W  S  F  K  S  M  L  T  V  L  N  A  G  T  F  E  L  K  S  W  Q  V  F  I  G  F  Q  H  N  E  L  L  V  S  A  D  G  A  V  A  I  D  G  D  G  F  P  V  R  V  G  K  N  G  T  T  L  A  G  Y  P  Q  S  D  L  K  T  A  I  D  T  A  G  D  F  T  Q  M  S  A  Q  I  N  I  K  G  T  Q  F  G  L  R  E  K  T  N  P  M  P  S  T  I  K  L  V  N  E  G  Y  K  C  P  A  P  K  R  Y   : K  S  Y  M  H  V  C  C  K  R  D  L  K  F  K  P  K  K  V  V  T  K  F  M  P  R  R  Y  G  D  L  S  I  T  Y  D  V  L  S  A  F  T  N  R  Y  Q  A  Q  V  T  L  D  N  L  N  P  L  G  R  L  D  H  W  N  L  T  W  E  W  M  R  N  E  F  I  N  T  I  K  G  A  H  T  H  K  I  D  P  S  E  C  I  Y  G  P  Q  G  Q  Y  Y  K  D  F  D  F  T  P  V  I  N  C  Q  K  K  P  I  I  S  D  L  P  K  E  K  A  N  D  D  K  F  G  K  L  P  Y  C  C  R  N  G  T  L  L  S  P  I  M  N  E  T  E  A  R  S  I  F  Q  M  E  V  F  K  L  P  P  D  L  N  R  T  A  L  N  P  P  Q  N  W  K  I  T  G  T  I  N  P  S  Y  S  C  G  P  P  V  R  I  D  P  S  V  F  P  D  P  K  G  I  G  I  A  T  A  V  A  S  W  Q  I  T  C  N  I  T  R  P  K  P  K  A  A  K  C  C  V  S  F  S  A  Y  Y  A  A  S  V  I  P  C  N  T  C  A  C  G  C  E  E  T  S  K  C  D  A  N  K  K  P  L  L  L  P  P  E  A  L  L  V  P  F  E  N  R  D  L  M  A  K  A  W  S  N  I  K  H  L  G  P  M  P  K  K  L  P  C  P  D  N  C  G  V  S  I  N  W  H  V  D  S  N  Y  K  T  G  W  T  A  R  I  T  L  F  N  W  G  N  D  A  F  E  N  W  F  S  A  I  Q  M  K  K  D  V  A  N  G  Y  E  N  V  Y  S  F  N  G  T  R  L  P  K  E  K  S  N  T  I  F  M  Q  G  L  P  G  L  K  F  L  V  G  E  V  N  G  T  N  P  N  K  D  P  R  V  P  G  K  Q  Q  S  I  I  S  F  L  K  K  N  T  P  H  I  N  V  D  A  G  D  G  F  P  S  K  I  F  F  N  G  E  E  C  A  L  P  P  E  F  P  K  N  T  A  A  F  K  S  K  F  G  V  F  P  A  V  L  L  A  L  L  T  F  F  L  L  T  D  R  L  H  *  *  Y  H  S  T  *  *  Y  M  T  *  T  L  S  L  L  Y  F  V  V  H  *  L  V  T  T  I  L  L  S  H  F  T  W  H  I  F  S  M  V  T  F  L  Y  T  L  L  H  *  A  L  K  L  K  S  N  V  I  K  L  *  Q  Q  N  E  E  R  K  K  K  K  C  W  Y  D  H  V  F  V  Y  V  S  L  N  L  Y  D  Q  M  R  S  I  F  F  M  F  I  N  </second_frame>
            <third_frame>   S  I  F  V  H  F  F  P  L  P  P  H  A  V  V  S  F  H  T  T  A  L  A  G  D  H  R  S  P  V  S  S  G  F  I  I  P  V  N  V  I  A  N  K  V  I  *  K  Q  N  P  R  Y  I  P  P  *  L  K  E  C  K  F  H  G  G  I  S  L  G  S  Y  *  F  W  L  R  A  V  I  K  H  V  T  G  R  I  T  E  E  T  K  K  R  *  Q  H  R  H  R  S  K  R  I  A  M  E  S  S  S  P  I  I  S  M  D  E  K  R  Y  I  H  *  *  R  M  Y  P  H  R  D  G  H  S  S  R  C  *  R  C  *  M  P  E  L  L  S  *  N  H  G  K  F  S  S  D  F  S  I  T  S  F  *  Y  R  R  T  V  Q  L  Q  L  T  A  M  D  F  R  Y  G  W  V  K  M  V  Q  H  W  L  G  I  H  N  P  I  *  K  R  R  L  I  P  P  V  I  L  L  R  C  Q  L  K  S  I  L  R  G  R  N  L  V  L  E  R  K  Q  I  Q  C  L  Q  Q  S  S  S  S  M  K  D  T  N  A  L  L  L  S  A  I  :  K  V  T  C  M  S  V  A  R  G  I  L  N  S  S  L  R  R  W  L  P  S  S  C  L  V  V  M  E  I  F  P  *  L  T  M  F  Y  Q  H  S  R  I  G  I  R  L  K  S  H  S  T  I  *  I  L  W  V  V  L  I  I  G  T  *  R  G  S  G  *  G  T  S  S  L  T  Q  L  K  A  R  I  L  T  K  L  I  L  L  N  V  F  T  D  H  K  D  N  I  T  R  I  S  I  S  L  L  *  *  I  A  K  R  N  Q  S  F  P  I  Y  L  R  R  K  Q  T  M  T  N  L  G  S  C  L  I  V  V  E  T  E  L  F  C  H  L  *  *  T  K  Q  K  Q  G  R  F  S  R  W  K  F  S  N  F  P  L  I  *  T  E  P  R  *  I  H  L  K  T  G  K  S  R  A  Q  L  T  R  L  I  H  V  D  R  Q  S  E  L  I  H  Q  Y  S  R  I  L  K  E  S  E  L  L  L  L  L  L  V  G  K  L  L  V  T  L  R  V  L  S  P  K  Q  P  N  V  V  F  L  F  R  L  I  M  L  H  P  L  S  P  A  T  L  A  L  V  A  V  K  R  R  L  N  V  T  R  T  K  S  H  Y  F  S  L  Q  K  R  Y  S  S  L  L  K  I  G  T  *  W  R  K  L  G  A  I  S  N  I  L  A  L  C  L  R  N  Y  L  V  L  I  I  A  E  *  A  S  I  G  M  W  I  V  T  I  K  Q  D  G  L  R  V  *  R  S  L  T  G  E  M  T  R  L  K  T  G  F  P  L  S  K  *  R  K  M  *  L  M  A  M  K  T  C  T  R  L  T  V  Q  G  Y  L  K  K  R  V  T  L  Y  L  C  K  V  Y  L  V  *  N  S  W  L  E  R  L  M  G  L  I  L  I  R  I  Q  E  Y  L  E  N  N  N  Q  L  F  H  F  *  R  R  I  H  H  I  S  T  S  M  L  A  M  D  S  L  L  R  Y  S  L  M  V  K  N  A  R  F  H  Q  S  F  L  K  T  L  Q  H  S  N  P  N  L  V  F  F  Q  Q  F  C  L  L  S  *  L  S  F  F  *  R  I  G  Y  T  D  S  I  I  Q  P  D  D  I  *  L  K  L  F  L  Y  Y  T  L  W  C  T  S  L  *  L  L  F  F  C  L  I  L  R  G  T  F  L  V  W  S  H  F  Y  I  H  Y  Y  I  E  L  *  S  *  R  V  M  *  S  S  Y  D  S  K  M  K  K  E  R  K  K  N  V  G  M  I  M  S  L  F  T  S  L  *  I  Y  M  I  K  *  E  V  S  F  S  C  L  L  M </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0226J04.1" strand="-"/>
                <serials PGL_serial="22" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="138294" stop="137625"/>
                    <exon start="137531" stop="136108"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>2091</number_coding_nucleotides>
                  <number_encoded_amino_acids>697</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SSITGLFWFHHSRECDRKQSHLKTKSQIYSSIIKGMQIPWRNISWVVLVLVACSYQTCNGQDYGGDEKTVAAPPPEQENCDGIFITYNFDGREKIYPLVKNVSAQGWSFKSMLTVLNAGTFELKSWQVFIGFQHNELLVSADGAVAIDGDGFPVRVGKNGTTLAGYPQSDLKTAIDTAGDFTQMSAQINIKGTQFGLREKTNPMPSTIKLVNEGYKCPAPKRYKSYMHVCCKRDLKFKPKKVVTKFMPRRYGDLSITYDVLSAFTNRYQAQVTLDNLNPLGRLDHWNLTWEWMRNEFINTIKGAHTHKIDPSECIYGPQGQYYKDFDFTPVINCQKKPIISDLPKEKANDDKFGKLPYCCRNGTLLSPIMNETEARSIFQMEVFKLPPDLNRTALNPPQNWKITGTINPSYSCGPPVRIDPSVFPDPKGIGIATAVASWQITCNITRPKPKAAKCCVSFSAYYAASVIPCNTCACGCEETSKCDANKKPLLLPPEALLVPFENRDLMAKAWSNIKHLGPMPKKLPCPDNCGVSINWHVDSNYKTGWTARITLFNWGNDAFENWFSAIQMKKDVANGYENVYSFNGTRLPKEKSNTIFMQGLPGLKFLVGEVNGTNPNKDPRVPGKQQSIISFLKKNTPHINVDAGDGFPSKIFFNGEECALPPEFPKNTAAFKSKFGVFPAVLLALLTFFLLTDRLH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="23" PGL_strand="-" PGL_start="144303" PGL_stop="141971"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="144303" e_stop="143337"/>
            <exon e_start="143131" e_stop="142940"/>
            <exon e_start="142851" e_stop="141971"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.988" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.977" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="144303" e_stop="143337" e_length="967"/>
          </exon>
          <intron i_serial="1" don_prob="0.988" acc_prob="0.991">
            <gDNA_intron_boundary i_start="143336" i_stop="143132" i_length="205"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="143131" e_stop="142940" e_length="192"/>
          </exon>
          <intron i_serial="2" don_prob="0.972" acc_prob="0.977">
            <gDNA_intron_boundary i_start="142939" i_stop="142852" i_length="88"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="142851" e_stop="141971" e_length="881"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="144303" stop="143337"/>
              <exon start="143131" stop="142940"/>
              <exon start="142851" stop="141971"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563073" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="144296" stop="143896"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U595466" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="23" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGAACTTCTAAAATGGCTACTCCTCAACAACCTTTGTTAACAAAAACACACAAACAAAATTCCATAATCAGCTTCAAGATCCTCACTTTTGTTGTAACTTTGTTTGTTGCTCTCTTCTTAGTTGTGTTTCTTGTTGCTCCATATCAATTTGAGATTAAACATTCTAATCTGTGTAAAACTGCACAAGATTCCCAACTCTGTCTCAGTTATGTTTCTGATTTAATATCCAATGAAATTGTCACATCTGATTCAGATGGACTAAGTATTCTGAAGAAATTTTTAGTTTACTCTGTTCATCAAATGAACAATGCAATTCCAGTGGTTCGCAAAATCAAGAATCAGATCAATGACATTCGTGAACAAGGGGCTTTAACTGATTGTCTTGAGCTTCTTGATCTGTCAGTTGATTTAGTATGTGATTCAATTGCAGCAATTGATAAGAGAAGTCGTTCGGAGCATGCCAATGCGCAAAGTTGGCTAAGTGGTGTGCTTACTAACCACGTTACGTGCTTGGATGAGCTTGATTCCTTTACTAAAGCTATGATAAATGGAACGAATCTTGATGAGTTGATCTCGAGAGCTAAGGTAGCATTGGCGATGCTTGCGTCTGTGACAACTCCAAATGATGAAGTTTTGAGGCCGGGTTTAGGAAAAATGCCATCTTGGGTGAGTTCGAGGGATAGGAAGCTGATGGAGAGTTCGGGTAAGGACATTGGAGCGAATGCAGTGGTGGCAAAAGATGGAACAGGGAAATATCGAACACTTGCTGAAGCTGTTGCTGCAGCACCAGATAAGAGTAAGACGCGTTATGTAATTTATGTAAAGAGGGGAACTTATAAAGAGAATGTTGAGGTGAGTAGCAGGAAAATGAATTTGATGATTATTGGTGATGGCATGTATGCTACCATCATTACTGGGAGCCTTAATGTTGTCGATGGATCAACAACCTTCCACTCTGCCACTCTTG : CTGCAGTTGGCAAAGGATTTATACTACAGGACATATGTATACAGAACACAGCAGGACCAGCTAAACACCAAGCTGTTGCACTTCGAGTTGGAGCTGATAAGTCTGTCATAAATCGTTGTCGTATCGATGCTTATCAAGACACCCTTTATGCACATTCTCAAAGGCAATTCTATCGAGACTCCTACGTGACAG : GGACTATTGATTTCATATTCGGTAATGCAGCAGTTGTATTCCAGAAATGCCAGCTCGTAGCTAGAAAACCGGGTAAATACCAGCAAAACATGGTGACTGCACAAGGCAGGACGGACCCAAATCAGGCCACGGGGACATCAATTCAGTTTTGTGATATAATAGCAAGTCCTGACCTAAAACCAGTCGTGAAAGAATTCCCAACATATCTTGGTAGGCCATGGAAAAAATATTCAAGAACTGTAGTGATGGAATCATACTTGGGTGGTCTCATTGATCCATCGGGTTGGGCTGAGTGGCACGGAGATTTTGCGTTAAAGACATTGTATTATGGTGAATTTATGAATAATGGACCTGGTGCTGGTACTAGTAAGCGTGTCAAGTGGCCTGGCTATCATGTCATTACTGACCCCGCTGAAGCTATGTCATTCACTGTGGCTAAGCTGATTCAGGGCGGATCATGGTTGAGGTCTACTGACGTGGCGTATGTGGATGGATTATATGATTAGAGTGATATAAAATTACTCTTTGTTTATGTAACAAGACATCTTTAAAAAGTTCAAAGTAAGTAGTAGTAATATATCCATATGAAGTGCCACATGAGCAGGGCAGAGCCGGGATTAAGTGTCTAAAGCATAACACACAACTCTAGTGTGACAAGCATTTACATGGCTCATTCCTTACTACTAAGTCGTCAATAAGTTCAGTTAAGGGGTTCATAAGTTAATATACGTATATATATTTATGTTGGCGATAAAGCTGAAACTGATGATGCTTTAATGTAATTATAGTTTTCTGAAAAAGGATATGTGTAATATTAGGTTTTCCCTGATGTTTATGGTTGTGGGGTGGTGGTTATGATAAAAATATGCAAGATGAAAGTC</gDNA_template>
            <first_frame> R  T  S  K  M  A  T  P  Q  Q  P  L  L  T  K  T  H  K  Q  N  S  I  I  S  F  K  I  L  T  F  V  V  T  L  F  V  A  L  F  L  V  V  F  L  V  A  P  Y  Q  F  E  I  K  H  S  N  L  C  K  T  A  Q  D  S  Q  L  C  L  S  Y  V  S  D  L  I  S  N  E  I  V  T  S  D  S  D  G  L  S  I  L  K  K  F  L  V  Y  S  V  H  Q  M  N  N  A  I  P  V  V  R  K  I  K  N  Q  I  N  D  I  R  E  Q  G  A  L  T  D  C  L  E  L  L  D  L  S  V  D  L  V  C  D  S  I  A  A  I  D  K  R  S  R  S  E  H  A  N  A  Q  S  W  L  S  G  V  L  T  N  H  V  T  C  L  D  E  L  D  S  F  T  K  A  M  I  N  G  T  N  L  D  E  L  I  S  R  A  K  V  A  L  A  M  L  A  S  V  T  T  P  N  D  E  V  L  R  P  G  L  G  K  M  P  S  W  V  S  S  R  D  R  K  L  M  E  S  S  G  K  D  I  G  A  N  A  V  V  A  K  D  G  T  G  K  Y  R  T  L  A  E  A  V  A  A  A  P  D  K  S  K  T  R  Y  V  I  Y  V  K  R  G  T  Y  K  E  N  V  E  V  S  S  R  K  M  N  L  M  I  I  G  D  G  M  Y  A  T  I  I  T  G  S  L  N  V  V  D  G  S  T  T  F  H  S  A  T  L   : A  A  V  G  K  G  F  I  L  Q  D  I  C  I  Q  N  T  A  G  P  A  K  H  Q  A  V  A  L  R  V  G  A  D  K  S  V  I  N  R  C  R  I  D  A  Y  Q  D  T  L  Y  A  H  S  Q  R  Q  F  Y  R  D  S  Y  V  T   : G  T  I  D  F  I  F  G  N  A  A  V  V  F  Q  K  C  Q  L  V  A  R  K  P  G  K  Y  Q  Q  N  M  V  T  A  Q  G  R  T  D  P  N  Q  A  T  G  T  S  I  Q  F  C  D  I  I  A  S  P  D  L  K  P  V  V  K  E  F  P  T  Y  L  G  R  P  W  K  K  Y  S  R  T  V  V  M  E  S  Y  L  G  G  L  I  D  P  S  G  W  A  E  W  H  G  D  F  A  L  K  T  L  Y  Y  G  E  F  M  N  N  G  P  G  A  G  T  S  K  R  V  K  W  P  G  Y  H  V  I  T  D  P  A  E  A  M  S  F  T  V  A  K  L  I  Q  G  G  S  W  L  R  S  T  D  V  A  Y  V  D  G  L  Y  D  *  S  D  I  K  L  L  F  V  Y  V  T  R  H  L  *  K  V  Q  S  K  *  *  *  Y  I  H  M  K  C  H  M  S  R  A  E  P  G  L  S  V  *  S  I  T  H  N  S  S  V  T  S  I  Y  M  A  H  S  L  L  L  S  R  Q  *  V  Q  L  R  G  S  *  V  N  I  R  I  Y  I  Y  V  G  D  K  A  E  T  D  D  A  L  M  *  L  *  F  S  E  K  G  Y  V  *  Y  *  V  F  P  D  V  Y  G  C  G  V  V  V  M  I  K  I  C  K  M  K  V </first_frame>
            <second_frame>  E  L  L  K  W  L  L  L  N  N  L  C  *  Q  K  H  T  N  K  I  P  *  S  A  S  R  S  S  L  L  L  *  L  C  L  L  L  S  S  *  L  C  F  L  L  L  H  I  N  L  R  L  N  I  L  I  C  V  K  L  H  K  I  P  N  S  V  S  V  M  F  L  I  *  Y  P  M  K  L  S  H  L  I  Q  M  D  *  V  F  *  R  N  F  *  F  T  L  F  I  K  *  T  M  Q  F  Q  W  F  A  K  S  R  I  R  S  M  T  F  V  N  K  G  L  *  L  I  V  L  S  F  L  I  C  Q  L  I  *  Y  V  I  Q  L  Q  Q  L  I  R  E  V  V  R  S  M  P  M  R  K  V  G  *  V  V  C  L  L  T  T  L  R  A  W  M  S  L  I  P  L  L  K  L  *  *  M  E  R  I  L  M  S  *  S  R  E  L  R  *  H  W  R  C  L  R  L  *  Q  L  Q  M  M  K  F  *  G  R  V  *  E  K  C  H  L  G  *  V  R  G  I  G  S  *  W  R  V  R  V  R  T  L  E  R  M  Q  W  W  Q  K  M  E  Q  G  N  I  E  H  L  L  K  L  L  L  Q  H  Q  I  R  V  R  R  V  M  *  F  M  *  R  G  E  L  I  K  R  M  L  R  *  V  A  G  K  *  I  *  *  L  L  V  M  A  C  M  L  P  S  L  L  G  A  L  M  L  S  M  D  Q  Q  P  S  T  L  P  L  L  :  L  Q  L  A  K  D  L  Y  Y  R  T  Y  V  Y  R  T  Q  Q  D  Q  L  N  T  K  L  L  H  F  E  L  E  L  I  S  L  S  *  I  V  V  V  S  M  L  I  K  T  P  F  M  H  I  L  K  G  N  S  I  E  T  P  T  *  Q  :  G  L  L  I  S  Y  S  V  M  Q  Q  L  Y  S  R  N  A  S  S  *  L  E  N  R  V  N  T  S  K  T  W  *  L  H  K  A  G  R  T  Q  I  R  P  R  G  H  Q  F  S  F  V  I  *  *  Q  V  L  T  *  N  Q  S  *  K  N  S  Q  H  I  L  V  G  H  G  K  N  I  Q  E  L  *  *  W  N  H  T  W  V  V  S  L  I  H  R  V  G  L  S  G  T  E  I  L  R  *  R  H  C  I  M  V  N  L  *  I  M  D  L  V  L  V  L  V  S  V  S  S  G  L  A  I  M  S  L  L  T  P  L  K  L  C  H  S  L  W  L  S  *  F  R  A  D  H  G  *  G  L  L  T  W  R  M  W  M  D  Y  M  I  R  V  I  *  N  Y  S  L  F  M  *  Q  D  I  F  K  K  F  K  V  S  S  S  N  I  S  I  *  S  A  T  *  A  G  Q  S  R  D  *  V  S  K  A  *  H  T  T  L  V  *  Q  A  F  T  W  L  I  P  Y  Y  *  V  V  N  K  F  S  *  G  V  H  K  L  I  Y  V  Y  I  F  M  L  A  I  K  L  K  L  M  M  L  *  C  N  Y  S  F  L  K  K  D  M  C  N  I  R  F  S  L  M  F  M  V  V  G  W  W  L  *  *  K  Y  A  R  *  K   </second_frame>
            <third_frame>   N  F  *  N  G  Y  S  S  T  T  F  V  N  K  N  T  Q  T  K  F  H  N  Q  L  Q  D  P  H  F  C  C  N  F  V  C  C  S  L  L  S  C  V  S  C  C  S  I  S  I  *  D  *  T  F  *  S  V  *  N  C  T  R  F  P  T  L  S  Q  L  C  F  *  F  N  I  Q  *  N  C  H  I  *  F  R  W  T  K  Y  S  E  E  I  F  S  L  L  C  S  S  N  E  Q  C  N  S  S  G  S  Q  N  Q  E  S  D  Q  *  H  S  *  T  R  G  F  N  *  L  S  *  A  S  *  S  V  S  *  F  S  M  *  F  N  C  S  N  *  *  E  K  S  F  G  A  C  Q  C  A  K  L  A  K  W  C  A  Y  *  P  R  Y  V  L  G  *  A  *  F  L  Y  *  S  Y  D  K  W  N  E  S  *  *  V  D  L  E  S  *  G  S  I  G  D  A  C  V  C  D  N  S  K  *  *  S  F  E  A  G  F  R  K  N  A  I  L  G  E  F  E  G  *  E  A  D  G  E  F  G  *  G  H  W  S  E  C  S  G  G  K  R  W  N  R  E  I  S  N  T  C  *  S  C  C  C  S  T  R  *  E  *  D  A  L  C  N  L  C  K  E  G  N  L  *  R  E  C  *  G  E  *  Q  E  N  E  F  D  D  Y  W  *  W  H  V  C  Y  H  H  Y  W  E  P  *  C  C  R  W  I  N  N  L  P  L  C  H  S  C :   C  S  W  Q  R  I  Y  T  T  G  H  M  Y  T  E  H  S  R  T  S  *  T  P  S  C  C  T  S  S  W  S  *  *  V  C  H  K  S  L  S  Y  R  C  L  S  R  H  P  L  C  T  F  S  K  A  I  L  S  R  L  L  R  D  R :   D  Y  *  F  H  I  R  *  C  S  S  C  I  P  E  M  P  A  R  S  *  K  T  G  *  I  P  A  K  H  G  D  C  T  R  Q  D  G  P  K  S  G  H  G  D  I  N  S  V  L  *  Y  N  S  K  S  *  P  K  T  S  R  E  R  I  P  N  I  S  W  *  A  M  E  K  I  F  K  N  C  S  D  G  I  I  L  G  W  S  H  *  S  I  G  L  G  *  V  A  R  R  F  C  V  K  D  I  V  L  W  *  I  Y  E  *  W  T  W  C  W  Y  *  *  A  C  Q  V  A  W  L  S  C  H  Y  *  P  R  *  S  Y  V  I  H  C  G  *  A  D  S  G  R  I  M  V  E  V  Y  *  R  G  V  C  G  W  I  I  *  L  E  *  Y  K  I  T  L  C  L  C  N  K  T  S  L  K  S  S  K  *  V  V  V  I  Y  P  Y  E  V  P  H  E  Q  G  R  A  G  I  K  C  L  K  H  N  T  Q  L  *  C  D  K  H  L  H  G  S  F  L  T  T  K  S  S  I  S  S  V  K  G  F  I  S  *  Y  T  Y  I  Y  L  C  W  R  *  S  *  N  *  *  C  F  N  V  I  I  V  F  *  K  R  I  C  V  I  L  G  F  P  *  C  L  W  L  W  G  G  G  Y  D  K  N  M  Q  D  E  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0226J04.1" strand="-"/>
                <serials PGL_serial="23" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="144303" stop="143337"/>
                    <exon start="143131" stop="142940"/>
                    <exon start="142851" stop="142346"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1662</number_coding_nucleotides>
                  <number_encoded_amino_acids>554</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RTSKMATPQQPLLTKTHKQNSIISFKILTFVVTLFVALFLVVFLVAPYQFEIKHSNLCKTAQDSQLCLSYVSDLISNEIVTSDSDGLSILKKFLVYSVHQMNNAIPVVRKIKNQINDIREQGALTDCLELLDLSVDLVCDSIAAIDKRSRSEHANAQSWLSGVLTNHVTCLDELDSFTKAMINGTNLDELISRAKVALAMLASVTTPNDEVLRPGLGKMPSWVSSRDRKLMESSGKDIGANAVVAKDGTGKYRTLAEAVAAAPDKSKTRYVIYVKRGTYKENVEVSSRKMNLMIIGDGMYATIITGSLNVVDGSTTFHSATLAAVGKGFILQDICIQNTAGPAKHQAVALRVGADKSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTIDFIFGNAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCDIIASPDLKPVVKEFPTYLGRPWKKYSRTVVMESYLGGLIDPSGWAEWHGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPAEAMSFTVAKLIQGGSWLRSTDVAYVDGLYD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="24" PGL_strand="+" PGL_start="164648" PGL_stop="165413"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="164648" e_stop="165413"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.987">
            <gDNA_exon_boundary e_start="164648" e_stop="165413" e_length="766"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="164648" stop="165413"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U604218" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAAAAACCAGAGCATGCCTCAACTTTGGCAACTATTGAGGCATCACAATTGGTTGTCGTTGAGGATAATCAAAATGTGATAAAAATTGGTTCTTCGACATGTGCAACTACTATATTGAATGCACATCATGGTGTATCTCAAAGATTGGAGGATACAAATTCAAGAGTTGTGGTTGGTGCATCACTAGTTGATTCTCGACAGAAATTAGGTGATGTTAATGCACATAAATCAGATGAAAATCATAGGCAGCATGTAGTTGTTGGTTCTAATGTTAAAAAAATTTCTGTGAGTGACAAGTGATGCATTGGGAAGGTCTGATGCCCCAAATAAGTTTGCTAACCTACGAGATGAGGAAAGTGATGAAGAGGATTGGTTGGATCAGTGCTTTGAGAATGCAGCTAGGGATGCAAATATTTCTCCTACGCAACAACGCAATAACAAAAAGAAACATGGAAGAAAGAATTGTTGGGATGGCAACGTGACTGAGGAGTTTGTTCCAAGGCACTTACCAATGTGACTAGCAAAGCAGAATCATATGACAGTGTCAACATATTCAACAAGATCCAATAATTCCAAGAAGAAGTGATGAAGTATCAAGTGTTGTTGGATAGTTTGAAGATGAAGACAAAAGCAAAATACTAAAAGTTACTTTAGATGGCAAATCAATTCTTTTTAAAATCATAAATGAGATGAAAATCATAGGCACTATTTAGGCATCCTCATATGTAATATCATCATAGAGAGTATTACAAACTCTGTGGTGATC</gDNA_template>
            <first_frame> Q  K  P  E  H  A  S  T  L  A  T  I  E  A  S  Q  L  V  V  V  E  D  N  Q  N  V  I  K  I  G  S  S  T  C  A  T  T  I  L  N  A  H  H  G  V  S  Q  R  L  E  D  T  N  S  R  V  V  V  G  A  S  L  V  D  S  R  Q  K  L  G  D  V  N  A  H  K  S  D  E  N  H  R  Q  H  V  V  V  G  S  N  V  K  K  I  S  V  S  D  K  *  C  I  G  K  V  *  C  P  K  *  V  C  *  P  T  R  *  G  K  *  *  R  G  L  V  G  S  V  L  *  E  C  S  *  G  C  K  Y  F  S  Y  A  T  T  Q  *  Q  K  E  T  W  K  K  E  L  L  G  W  Q  R  D  *  G  V  C  S  K  A  L  T  N  V  T  S  K  A  E  S  Y  D  S  V  N  I  F  N  K  I  Q  *  F  Q  E  E  V  M  K  Y  Q  V  L  L  D  S  L  K  M  K  T  K  A  K  Y  *  K  L  L  *  M  A  N  Q  F  F  L  K  S  *  M  R  *  K  S  *  A  L  F  R  H  P  H  M  *  Y  H  H  R  E  Y  Y  K  L  C  G  D  </first_frame>
            <second_frame>  K  N  Q  S  M  P  Q  L  W  Q  L  L  R  H  H  N  W  L  S  L  R  I  I  K  M  *  *  K  L  V  L  R  H  V  Q  L  L  Y  *  M  H  I  M  V  Y  L  K  D  W  R  I  Q  I  Q  E  L  W  L  V  H  H  *  L  I  L  D  R  N  *  V  M  L  M  H  I  N  Q  M  K  I  I  G  S  M  *  L  L  V  L  M  L  K  K  F  L  *  V  T  S  D  A  L  G  R  S  D  A  P  N  K  F  A  N  L  R  D  E  E  S  D  E  E  D  W  L  D  Q  C  F  E  N  A  A  R  D  A  N  I  S  P  T  Q  Q  R  N  N  K  K  K  H  G  R  K  N  C  W  D  G  N  V  T  E  E  F  V  P  R  H  L  P  M  *  L  A  K  Q  N  H  M  T  V  S  T  Y  S  T  R  S  N  N  S  K  K  K  *  *  S  I  K  C  C  W  I  V  *  R  *  R  Q  K  Q  N  T  K  S  Y  F  R  W  Q  I  N  S  F  *  N  H  K  *  D  E  N  H  R  H  Y  L  G  I  L  I  C  N  I  I  I  E  S  I  T  N  S  V  V  I </second_frame>
            <third_frame>   K  T  R  A  C  L  N  F  G  N  Y  *  G  I  T  I  G  C  R  *  G  *  S  K  C  D  K  N  W  F  F  D  M  C  N  Y  Y  I  E  C  T  S  W  C  I  S  K  I  G  G  Y  K  F  K  S  C  G  W  C  I  T  S  *  F  S  T  E  I  R  *  C  *  C  T  *  I  R  *  K  S  *  A  A  C  S  C  W  F  *  C  *  K  N  F  C  E  *  Q  V  M  H  W  E  G  L  M  P  Q  I  S  L  L  T  Y  E  M  R  K  V  M  K  R  I  G  W  I  S  A  L  R  M  Q  L  G  M  Q  I  F  L  L  R  N  N  A  I  T  K  R  N  M  E  E  R  I  V  G  M  A  T  *  L  R  S  L  F  Q  G  T  Y  Q  C  D  *  Q  S  R  I  I  *  Q  C  Q  H  I  Q  Q  D  P  I  I  P  R  R  S  D  E  V  S  S  V  V  G  *  F  E  D  E  D  K  S  K  I  L  K  V  T  L  D  G  K  S  I  L  F  K  I  I  N  E  M  K  I  I  G  T  I  *  A  S  S  Y  V  I  S  S  *  R  V  L  Q  T  L  W  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0226J04.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="164648" stop="164947"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>297</number_coding_nucleotides>
                  <number_encoded_amino_acids>99</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QKPEHASTLATIEASQLVVVEDNQNVIKIGSSTCATTILNAHHGVSQRLEDTNSRVVVGASLVDSRQKLGDVNAHKSDENHRQHVVVGSNVKKISVSDK*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0226J04.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="164937" stop="165164"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VTSDALGRSDAPNKFANLRDEESDEEDWLDQCFENAARDANISPTQQRNNKKKHGRKNCWDGNVTEEFVPRHLPM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 73 chains have been computed
$ 
$ memory statistics:
$ 178664 bytes spliced alignments in total
$ 39 spliced alignments have been stored
$ 4581 bytes was the average size of a spliced alignment
$ 34944 bytes predicted gene locations in total
$ 24 predicted gene locations have been stored
$ 1456 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 82 backtrace matrices have been allocated
$ 
$ date finished: 2009-07-24 21:33:53
-->
