<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2008-04-10 08:09:02"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E353207" ref_strand="+" ref_description="SGN-E353207 [cTOS-14-B13]">
      <seq>tcggcatgtactgttttccaaaacttagaagtaaattgcgtacctctatctgatatgatggagagtggaactccgtgcaatcgaacaatttctaagatgtaaagtttggctaacttctctgcattgtaagtcaccttaaccgaaatagagtgagcagacttagttaatctgtcaacaatcacccaaatagagtcatacctacccatcgtctttggatgactaaccacgaagtccattgcaattctctcccacttccattcaggaatgggcattctctgaagtgtccctccaggcctctggtgttcatactttacttgctgacaattcgggcattgagcaacaaaattaacaatgtcacgcttcatcctactccaccaaaaatgttgctttaggtcacgatacatcttgtttgcaccaggatgtatagagtacttcgaactatgagcctatataagaatagtgtgaatcaaatcatcgacgcggggtacacatactccttcccttattctcaaaacaccttcctcatcgatttttgcttcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="+" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="6885" stop="8023"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7182" g_stop="7723" g_length="542"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="542" r_length="542" r_score="0.906"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="+" ref_id="SGN-E353207" ref_strand="+">
        <total_alignment_score>0.906</total_alignment_score>
        <cumulative_length_of_scored_exons>542</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E353207" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7182" e_stop="7723"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGCATGCAATGTTTTCCAAAACTTAGAAGTAAATTGCGTACCTCTATCTGATATGATGGAAAGTGGAACTCCATGCAATCGAACAATTTCTGAGATATAGAGCCTGGCTAACTTCTCTGCATTGTAAGTCACCTTGACCGGAATGAAATGAGCAGACTTGGTTAATCTGTCAACGATTACTTAAATGGAGTCATACTTACCCAGTGTCTTTGGAAGACCAACCACAAAGTTCATTGCAATTCTCTCCCACTTCCATTCAGGAATGGGCATTCTCTGAAGTGTTCCTCCAGGCCTCTGGTGTTCATACTTTACTTGCTGACAATTCGGGCATTGAGCAACAAAGTCAACAATGTCGCGCTTCATCCTACTCCACCAGAAATGTTGCTTTAGGTCGCGATACATCTTGGTTGCACCAGGATGTATAGAACACCTTGAACTATGAGCCTCTGTAAGAATAGTGTGAATCAAATCATCTGCACGAGGTAGACATAC-CCTTCCCTTAATTCTCAAAACACCTTCCTCGTCGATTTTTGCTTCTTT</genome_strand>
        <mrna_strand>TCGGCATGTACTGTTTTCCAAAACTTAGAAGTAAATTGCGTACCTCTATCTGATATGATGGAGAGTGGAACTCCGTGCAATCGAACAATTTCTAAGATGTAAAGTTTGGCTAACTTCTCTGCATTGTAAGTCACCTTAACCGAAATAGAGTGAGCAGACTTAGTTAATCTGTCAACAATCACCCAAATAGAGTCATACCTACCCATCGTCTTTGGATGACTAACCACGAAGTCCATTGCAATTCTCTCCCACTTCCATTCAGGAATGGGCATTCTCTGAAGTGTCCCTCCAGGCCTCTGGTGTTCATACTTTACTTGCTGACAATTCGGGCATTGAGCAACAAAATTAACAATGTCACGCTTCATCCTACTCCACCAAAAATGTTGCTTTAGGTCACGATACATCTTGTTTGCACCAGGATGTATAGAGTACTTCGAACTATGAGCCTATATAAGAATAGTGTGAATCAAATCATCGACGCGGGGTACACATACTCCTTCCCTT-ATTCTCAAAACACCTTCCTCATCGATTTTTGCTTCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E352117" ref_strand="+" ref_description="SGN-E352117 [cTOS-13-N24]">
      <seq>tttgatcctgcctccacattttcatatgtatcttcctcatttgctactgttcttaatttacatagtgaatcgcttgacatacctattcgtgttctactccggtgggtgagtctgtgattgttgaaaaggtgtataggtcttgtcttgtgacatttgtgggagcaatactcatgtagacttggttatcctataaatggttgacttcgatgtaattctgggtatgacttggctgtctccaaattttgcaatcttggattgtaatgctaaaactgtaacgttggccaagcctgagatagatgcgttagtgtgggagggtgactacacttccactccagttcgtatcatctcctttctttgtgctaagagaatggttagtaaagggtgtttagctttcttggcacacctcagggatgatactacccaagtaccttcaattgagtcagtttcgatagtccgtgagtttctggatgtgtttcctgcagaccttcctggtatgccaccggatagggatattgacttttgcattgatctggagccgggtgatcaccccatttccatacccccttatagaatggctcccgctgagttgggggagttaaaggcccaacttcaagagttgttangtaagggcttcattangccaagtgcatccccttggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="-" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="10033" stop="8773"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9733" g_stop="9073" g_length="661"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="659" r_length="659" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="-" ref_id="SGN-E352117" ref_strand="+">
        <total_alignment_score>0.914</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E352117" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9733" e_stop="9073"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGATCATGGATCCACATTTTCATATGTATCTTCCTCATTTGCTACTGGTCTTAATTTACATTGTGAATTGCTTGACATGCCTATTCGTGTTTCTACTCTGGTGGGTGAGTCTGTGATAGTTGAAAAGGTGTATAGGTCTTGTCCTGTGACTTTTATGGAGAGCAATACTCATGTAGACTTGGTTATCTTAGAAATGGTTGATTTCGATGTAATTCTAGGTATGACTTGGCTTTCTCCAAATTTTGCAATCTTAGATTGCAATGCCAAAACTGTTACATTGGCCAAGCCTGAGATAGATCCGTTCGTGTGGGAGGGTGACTACACTTCCACTCCAGTTTGTATCATCTCCTTCATTAGTGCTAAGAGAATGGTTAGAAAGGGTTGTTTAGCTTTCTTGGCACACCTCAGGGATGATACTACCCAAGTACCCTCAATTGAGTCGGTTTAAATAGTCTGTGAGTTTCTGGATGTGTTTCCTACAAACCTTCCGGGTATGCCACCGGATAGGGATATCGACTTTTGCATTGATCTGGAGCCGAGTACTCATCCCATTTCCATACCCCCTTATAGGATGGCTCCCACTGAGTTAAGAGAGTTAAAGGCCCAACTTCAAGAGTTGTTAAGCAAAGGCTTTATTAGACCAAGTGCATCCCCTTGGG</genome_strand>
        <mrna_strand>TTTGATCCTGCCTCCACATTTTCATATGTATCTTCCTCATTTGCTACTGTTCTTAATTTACATAGTGAATCGCTTGACATACCTATTCGTG-TTCTACTCCGGTGGGTGAGTCTGTGATTGTTGAAAAGGTGTATAGGTCTTGTCTTGTGACATTTGTGG-GAGCAATACTCATGTAGACTTGGTTATCCTATAAATGGTTGACTTCGATGTAATTCTGGGTATGACTTGGCTGTCTCCAAATTTTGCAATCTTGGATTGTAATGCTAAAACTGTAACGTTGGCCAAGCCTGAGATAGATGCGTTAGTGTGGGAGGGTGACTACACTTCCACTCCAGTTCGTATCATCTCCTTTCTTTGTGCTAAGAGAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACACCTCAGGGATGATACTACCCAAGTACCTTCAATTGAGTCAGTTTCGATAGTCCGTGAGTTTCTGGATGTGTTTCCTGCAGACCTTCCTGGTATGCCACCGGATAGGGATATTGACTTTTGCATTGATCTGGAGCCGGGTGATCACCCCATTTCCATACCCCCTTATAGAATGGCTCCCGCTGAGTTGGGGGAGTTAAAGGCCCAACTTCAAGAGTTGTTANGTAAGGGCTTCATTANGCCAAGTGCATCCCCTTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E352716" ref_strand="+" ref_description="SGN-E352716 [cTOS-11-H19]">
      <seq>gatctgtcccaggcttggctaacgtcacagttttagcattacaatccaagattgcaaaatttggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaagtctacataagtattgctccccacaaaagtcaccagaccagacctatatactttttcaactatcacagactcacccaccggagtagaaacacgaataggcatgtcaagcaattcataatttaatttaagaccagtagcaaatgaggaagatacatatgaaaatgtggatccagggtcaaataatacaaaagccatgcaatcacaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="+" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="9133" stop="10063"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9433" g_stop="9763" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="331" r_length="331" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="+" ref_id="SGN-E352716" ref_strand="+">
        <total_alignment_score>0.915</total_alignment_score>
        <cumulative_length_of_scored_exons>331</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E352716" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9433" e_stop="9763"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCTATCTCAGGCTTGGCCAATGTAACAGTTTTGGCATTGCAATCTAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCTAGAATTACATCGAAATCAACCATTTCTAAGATAACCAAGTCTACATGAGTATTGCTCTCCATAAAAGTCACAGGACAAGACCTATACACCTTTTCAACTATCACAGACTCACCCACCAGAGTAGAAACACGAATAGGCATGTCAAGCAATTCACAATGTAAATTAAGACCAGTAGCAAATGAGGAAGATACATATGAAAATGTGGATCCATGATCAAATAATACAAAAGTCATGCAAGCACAAACCAA</genome_strand>
        <mrna_strand>GATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAGTCTACATAAGTATTGCTCCCCACAAAAGTCACCAGACCAGACCTATATACTTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAATTCATAATTTAATTTAAGACCAGTAGCAAATGAGGAAGATACATATGAAAATGTGGATCCAGGGTCAAATAATACAAAAGCCATGCAATCACAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E728374" ref_strand="+" ref_description="SGN-E728374 [LA17CE03]">
      <seq>agatgatcaaccaggttctttctcatcttagcgggttatctgatcagggccagacacctccagtgtttcctgtaccagcacctcaggttccgggagtacaacatgcagctgttgtggctctccgcatggatgcctcattggaaataggcacatttcctcgattgactacagggcctataatgacgagtgatcaacatgaacttttcactaaattcttgaagttgaaacctctagtcttcaagggtgctgaatctgaggatgcctatgattttcttgttgattgtcatgagctgctacataagatggacatagtagaacggttcggggttgagtttgtgacctatcaatttcagggaaatgtcaaaatgtggtggcggtcgtatgttgagtgtcaaccagcacagcaccacctatgacttgggcatcattctctagcttatttatggaaaagtgtataccccggacgttgagggataggaggagagatgagttcctgagtctatagcaaggcaggatgtctgttactgcttatgaggctaaattttgtgcactatccaggtatgccacccagctttgcttcagtccacaagagcggattcaccgttttgtgaaaggattgaggtcagatttgcagatcccagccctacaggtagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="-" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="11298" stop="10043"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10998" g_stop="10343" g_length="656"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="655" r_length="655" r_score="0.901"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="-" ref_id="SGN-E728374" ref_strand="+">
        <total_alignment_score>0.901</total_alignment_score>
        <cumulative_length_of_scored_exons>656</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E728374" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10998" e_stop="10343"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATGATTAATCAGGTTCTTACTTATCTTAGTGGGTTATCTGATCAGGGCCAGACACCTCCAGTGTTTTCTGCACCAGCGCCTCAGGTTCCGAGAGTACAACATGCAGCTGCTGTGGCCCACCGCATGGATGCCTCATTGGAAATAGGCACGTTTCCTCGGTTAACTACAGGGACCATAATGACAAGTGATCAGCATGAACTCTTCAGTAAGTTCTTGAAATTGAAACCTCAAGTCTTCAAGGGTGCTGAATCTGAGGATGCCTACGATTTTCTGGTTGATTGTCATGAACTACTACACAAGATGGGTATAGTAGAACGATTTGGCGTCGAGTTTGTGACCTATCAATTTCAAGGGAATGCCAAAATTTGGTGGGGATCGTATGTTGAATGTCAACCAGCACAAGCACCACCTATGACTTGGGCATCATTCTCTAGTTTGTTTTTGGAGAAGTATATACCCCGGACTTTGAGGGATAGGAGGAGAGATGAGTTCTTGAGCCTAGAGTAAGGAAGAATGTCGGTTACTGCTTATGAGGCTAAGTTTTGTGCACTATCTAGGTATGCCACCCAGCTTTGCTTCAGTCCACAAGAGCGGATTCGCCGTTTCGTGAAAGGGTTGAGGTCAGATTTGCAGATTTCAGCCTTACAGGTAGCT</genome_strand>
        <mrna_strand>AGATGATCAACCAGGTTCTTTCTCATCTTAGCGGGTTATCTGATCAGGGCCAGACACCTCCAGTGTTTCCTGTACCAGCACCTCAGGTTCCGGGAGTACAACATGCAGCTGTTGTGGCTCTCCGCATGGATGCCTCATTGGAAATAGGCACATTTCCTCGATTGACTACAGGGCCTATAATGACGAGTGATCAACATGAACTTTTCACTAAATTCTTGAAGTTGAAACCTCTAGTCTTCAAGGGTGCTGAATCTGAGGATGCCTATGATTTTCTTGTTGATTGTCATGAGCTGCTACATAAGATGGACATAGTAGAACGGTTCGGGGTTGAGTTTGTGACCTATCAATTTCAGGGAAATGTCAAAATGTGGTGGCGGTCGTATGTTGAGTGTCAACCAGCAC-AGCACCACCTATGACTTGGGCATCATTCTCTAGCTTATTTATGGAAAAGTGTATACCCCGGACGTTGAGGGATAGGAGGAGAGATGAGTTCCTGAGTCTATAGCAAGGCAGGATGTCTGTTACTGCTTATGAGGCTAAATTTTGTGCACTATCCAGGTATGCCACCCAGCTTTGCTTCAGTCCACAAGAGCGGATTCACCGTTTTGTGAAAGGATTGAGGTCAGATTTGCAGATCCCAGCCCTACAGGTAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E231589" ref_strand="+" ref_description="SGN-E231589 [cLED-4-L18]">
      <seq>tcgattctccttctctctctttctgttcttttctttttcttattcaaaccctccttcttttaccctaattagcatataattaagaataaaagatggaataataacccactaatttactcaaggttacctcttttaacccccaggtaattagacttattaacataaacccactaactttataattaaagtaggaatagtccaaaacgtcccttaaaacgtgtaaagaaatccgacccagactgggattacgcaacctgtgatggcccgtcgtgcctgcgacggtccgtcctgcaggtcgtcgcaaggttcatagactcaatttccaccaaagagtctgtgacggtccgtcacgcccgtgacggtccgtcgtgccattccgttacgaagttcagagagtcgatttttagtacccaatttcagaatttctaagtgttttgaaacgagactcctcgacggtccatcgtgctcatgacggtccgtcgtgggttccgtcgtctcaacctgtttttccaaaaataaaatctgctactcaaaacgactaaacaggtcgttacattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="-" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="13888" stop="12730"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13588" g_stop="13030" g_length="559"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="558" r_length="558" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="-" ref_id="SGN-E231589" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>559</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E231589" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13588" e_stop="13030"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGATTCTCCTTCTCTCTCTTTCTGTTCTTTTCTTTTTCTTATTCAAACCCTCTTTCTTTTACCCTAATTAACATGTAATTAAGTGTAAAAGATGACAATAATAACCCACAATTTAACTCAAGGTTACCTCTTTTATCCCCCAAGAAATTAGACTTATTAACATAAACCCACTAACTTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTTAAGAAATCCGATCCAGACTGGGATTACGCAACCTGTAACGGCCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGCAAGGTTCAGAGACTCAATTTCCACCAAACAGTCTGTGACGGTCCGTCACACCCGTGACGGTCCGTCCTGCCATTCCATTACGAAGTTCAGAGAGTCGATTTTCAGTACCCAATTTCAGAATTTCTAAGTGTTTTGAAATGAGACCCCTCGACGGTCCGTCGTGCTCATGACGGTCCGTCGTGGGTTCCGTCGTCTCAGCCTGTTTTTCCAGAAATAAAATCTGCTACTCAAAACGACTAAACAGGTCGTTACATAT</genome_strand>
        <mrna_strand>TCGATTCTCCTTCTCTCTCTTTCTGTTCTTTTCTTTTTCTTATTCAAACCCTCCTTCTTTTACCCTAATTAGCATATAATTAAGAATAAAAGATG-GAATAATAACCCACTAATTTACTCAAGGTTACCTCTTTTAACCCCCAGGTAATTAGACTTATTAACATAAACCCACTAACTTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTAAAGAAATCCGACCCAGACTGGGATTACGCAACCTGTGATGGCCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGCAAGGTTCATAGACTCAATTTCCACCAAAGAGTCTGTGACGGTCCGTCACGCCCGTGACGGTCCGTCGTGCCATTCCGTTACGAAGTTCAGAGAGTCGATTTTTAGTACCCAATTTCAGAATTTCTAAGTGTTTTGAAACGAGACTCCTCGACGGTCCATCGTGCTCATGACGGTCCGTCGTGGGTTCCGTCGTCTCAACCTGTTTTTCCAAAAATAAAATCTGCTACTCAAAACGACTAAACAGGTCGTTACATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E241959" ref_strand="+" ref_description="SGN-E241959 [cLED-27-I11]">
      <seq>tcgattctccttctctctctttctgttcttttctttttcttattcaaaccctccttcttttaccctaattagcatataattaagaataaaagatggaataataacccactaatttactcaaggttacctcttttaacccccaggtaattagacttattaacataaacccactaactttataattaaagtaggaatagtccaaaacgtcccttaaaacgtgtaaagaaatccgacccagactgggattacgcaacctgtgatggcccgtcgtgcctgcgacggtccgtcctgcaggtcgtcgcaaggttcagagactcaatttccaccaaagagtctgtgacggtccgtcacgcccgtgacggtccgtcgtgccattccgttacgaagttcagagagtcgatttttagtacccaatttcagaatttctaagtgttttgaaacgagactcctcgacggtccatcgtgctcatgacggtccgtcgtgggttccgtcgtctcaacctgtttttccaaaaataaaatctgctactcaaaacgactaaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="-" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="13888" stop="12743"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13588" g_stop="13043" g_length="546"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="545" r_length="545" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="-" ref_id="SGN-E241959" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E241959" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13588" e_stop="13043"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGATTCTCCTTCTCTCTCTTTCTGTTCTTTTCTTTTTCTTATTCAAACCCTCTTTCTTTTACCCTAATTAACATGTAATTAAGTGTAAAAGATGACAATAATAACCCACAATTTAACTCAAGGTTACCTCTTTTATCCCCCAAGAAATTAGACTTATTAACATAAACCCACTAACTTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTTAAGAAATCCGATCCAGACTGGGATTACGCAACCTGTAACGGCCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGCAAGGTTCAGAGACTCAATTTCCACCAAACAGTCTGTGACGGTCCGTCACACCCGTGACGGTCCGTCCTGCCATTCCATTACGAAGTTCAGAGAGTCGATTTTCAGTACCCAATTTCAGAATTTCTAAGTGTTTTGAAATGAGACCCCTCGACGGTCCGTCGTGCTCATGACGGTCCGTCGTGGGTTCCGTCGTCTCAGCCTGTTTTTCCAGAAATAAAATCTGCTACTCAAAACGACTAAACA</genome_strand>
        <mrna_strand>TCGATTCTCCTTCTCTCTCTTTCTGTTCTTTTCTTTTTCTTATTCAAACCCTCCTTCTTTTACCCTAATTAGCATATAATTAAGAATAAAAGATG-GAATAATAACCCACTAATTTACTCAAGGTTACCTCTTTTAACCCCCAGGTAATTAGACTTATTAACATAAACCCACTAACTTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTAAAGAAATCCGACCCAGACTGGGATTACGCAACCTGTGATGGCCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGCAAGGTTCAGAGACTCAATTTCCACCAAAGAGTCTGTGACGGTCCGTCACGCCCGTGACGGTCCGTCGTGCCATTCCGTTACGAAGTTCAGAGAGTCGATTTTTAGTACCCAATTTCAGAATTTCTAAGTGTTTTGAAACGAGACTCCTCGACGGTCCATCGTGCTCATGACGGTCCGTCGTGGGTTCCGTCGTCTCAACCTGTTTTTCCAAAAATAAAATCTGCTACTCAAAACGACTAAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E236652" ref_strand="+" ref_description="SGN-E236652 [cLED-13-L8]">
      <seq>tcgattctccttctctctctttctgttcttttctttttcttattcaaaccctccttcttttaccctaattagcatataattaagaataaaagatggaataataacccactaatttactcaaggttacctcttttaacccccaggtaattagacttattaacataaacccactaactttataattaaagtaggaatagtccaaaacgtcccttaaaacgtgtaaagaaatccgacccagactgggattacgcaacctgtgatggcccgtcgtgcctgcgacggtccgtcctgcaggtcgtcgcaaggttcagagactcaatttccaccaaagagtctgtgacggtccgtcacgcccgtgacggtccgtcgtgccattccgttacgaagttcagagagtcgatttttagtacccaatttcagaatttctaagtgttttgaaacgagactcctcgacggtccatcgtgctcatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="-" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="13888" stop="12816"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13588" g_stop="13116" g_length="473"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="472" r_length="472" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="-" ref_id="SGN-E236652" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>473</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E236652" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13588" e_stop="13116"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGATTCTCCTTCTCTCTCTTTCTGTTCTTTTCTTTTTCTTATTCAAACCCTCTTTCTTTTACCCTAATTAACATGTAATTAAGTGTAAAAGATGACAATAATAACCCACAATTTAACTCAAGGTTACCTCTTTTATCCCCCAAGAAATTAGACTTATTAACATAAACCCACTAACTTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTTAAGAAATCCGATCCAGACTGGGATTACGCAACCTGTAACGGCCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGCAAGGTTCAGAGACTCAATTTCCACCAAACAGTCTGTGACGGTCCGTCACACCCGTGACGGTCCGTCCTGCCATTCCATTACGAAGTTCAGAGAGTCGATTTTCAGTACCCAATTTCAGAATTTCTAAGTGTTTTGAAATGAGACCCCTCGACGGTCCGTCGTGCTCATGA</genome_strand>
        <mrna_strand>TCGATTCTCCTTCTCTCTCTTTCTGTTCTTTTCTTTTTCTTATTCAAACCCTCCTTCTTTTACCCTAATTAGCATATAATTAAGAATAAAAGATG-GAATAATAACCCACTAATTTACTCAAGGTTACCTCTTTTAACCCCCAGGTAATTAGACTTATTAACATAAACCCACTAACTTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTAAAGAAATCCGACCCAGACTGGGATTACGCAACCTGTGATGGCCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGCAAGGTTCAGAGACTCAATTTCCACCAAAGAGTCTGTGACGGTCCGTCACGCCCGTGACGGTCCGTCGTGCCATTCCGTTACGAAGTTCAGAGAGTCGATTTTTAGTACCCAATTTCAGAATTTCTAAGTGTTTTGAAACGAGACTCCTCGACGGTCCATCGTGCTCATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E396070" ref_strand="+" ref_description="SGN-E396070 [TUS-18-P18]">
      <seq>atcgattctccttctctctctttctgttcttttctttttcttattcaaaccctccttcttttaccctaattagcatataattaagaataaaagatggaataataacccactaatttactcaaggttacctcttttaacccccaggtaattagacttattaacataaacccactaactttataattaaagtaggaatagtccaaaacgtcccttaaaacgtgtaaagaaatccgacccagactgggattacgcaacctgtgatggcccgtcgtgcctgcgacggtccgtcctgcaggtcgtcgcaaggttcagagactcaatttccaccaaagagtctgtgacggtccgtcacgcccgtgacggtccgtcgtgccattccgttacgaagttcagagagtcgatttttagtaccgggggggggagtttctaattgttttgaaactagactcctcga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="-" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="13889" stop="12877"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13589" g_stop="13135" g_length="455"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="454" r_length="454" r_score="0.923"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="-" ref_id="SGN-E396070" ref_strand="+">
        <total_alignment_score>0.923</total_alignment_score>
        <cumulative_length_of_scored_exons>455</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E396070" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13589" e_stop="13135"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCGATTCTCCTTCTCTCTCTTTCTGTTCTTTTCTTTTTCTTATTCAAACCCTCTTTCTTTTACCCTAATTAACATGTAATTAAGTGTAAAAGATGACAATAATAACCCACAATTTAACTCAAGGTTACCTCTTTTATCCCCCAAGAAATTAGACTTATTAACATAAACCCACTAACTTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTTAAGAAATCCGATCCAGACTGGGATTACGCAACCTGTAACGGCCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGCAAGGTTCAGAGACTCAATTTCCACCAAACAGTCTGTGACGGTCCGTCACACCCGTGACGGTCCGTCCTGCCATTCCATTACGAAGTTCAGAGAGTCGATTTTCAGTACCCAATTTCAGAATTTCTAAGTGTTTTGAAATGAGACCCCTCGA</genome_strand>
        <mrna_strand>ATCGATTCTCCTTCTCTCTCTTTCTGTTCTTTTCTTTTTCTTATTCAAACCCTCCTTCTTTTACCCTAATTAGCATATAATTAAGAATAAAAGATG-GAATAATAACCCACTAATTTACTCAAGGTTACCTCTTTTAACCCCCAGGTAATTAGACTTATTAACATAAACCCACTAACTTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTAAAGAAATCCGACCCAGACTGGGATTACGCAACCTGTGATGGCCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGCAAGGTTCAGAGACTCAATTTCCACCAAAGAGTCTGTGACGGTCCGTCACGCCCGTGACGGTCCGTCGTGCCATTCCGTTACGAAGTTCAGAGAGTCGATTTTTAGTACCGGGGGGGGGAGTTTCTAATTGTTTTGAAACTAGACTCCTCGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E209683" ref_strand="+" ref_description="SGN-E209683 [cLEC-54-L6]">
      <seq>taatgaactaaattcccaaatgagtatgatgaggaggtgtgagtcctcattgatgtgcttggtgttgtaaccaagggttatggtaactataaatgctgcatgttaaggatattagttgattttatgatattgcttaatacatactgttccctattttgagttggccgatgatatctactcagtacccgtggtttgtactgacccctacttttatgtttatcttcttgttatttgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="+" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="14000" stop="14836"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14300" g_stop="14536" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="236" r_length="236" r_score="0.903"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="+" ref_id="SGN-E209683" ref_strand="+">
        <total_alignment_score>0.903</total_alignment_score>
        <cumulative_length_of_scored_exons>237</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E209683" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14300" e_stop="14536"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATGAACCTAAATCCCAAATGAGTATGATGAGGAGGCGTGAGTCCTCATTGATGAGCTTGGTGTTGTAACCAAGGGTTATGGTAATTGTAAATGCTGCATGCTAAGGATATTAGTTGAGTTTGTGATGTTATCTGATATATACTGTTTTCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCCTACTTTTATGTTT-TCTTCTTTGTTATTTGTG</genome_strand>
        <mrna_strand>TAATGAACTAAATTCCCAAATGAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGTTGTAACCAAGGGTTATGGTAACTATAAATGCTGCATGTTAAGGATATTAGTTGATTTTATGATATTGCTTAATACATACTGTTCCCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGGTTTGTACTGA-CCCCTACTTTTATGTTTATCTTC-TTGTTATTTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E355114" ref_strand="+" ref_description="SGN-E355114 [cTOS-18-B12]">
      <seq>ttaggttcgttggtctcatcacacaagaacaggtctagtagagtctttaggaacggtagggggacgcctttacttttctttgagaggctataagactttaggaaaatttcaccctttcattctttctttcgtgctactacttgagtccaattggtatctaggcgatacaaattggtatctgaccatcttcactctcttttgcagatggttagaactagagcaacgaccacgtcaacaccaacaccggccagacaagaaacaactgagccagccactggggctgtgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="+" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="14645" stop="15531"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14945" g_stop="15231" g_length="287"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="286" r_length="286" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="+" ref_id="SGN-E355114" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>287</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E355114" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14945" e_stop="15231"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGGTTCGTTGGTCTCATCACACAAGAACGAGTCTAGTAGAGCCTTAAGGAACGGTAGGGGGACGCCTTTACTTTTCTTTGAGAGGCTATAAGACTTTAGGAAAAATTCCATTCTTTCTTTCTTTCTTTCGTGCTACTACTTGGATCCAATTGGTATCTAGGTGATACAAATTGGTATCTGACCATCTTCACTCTATTTCGCGGATGGTTAGAACTAGAGCAACGACTGCGCCAACACCAACATCGGCAAGATAAGAAGCGTCTGAGCCAGCCACTGGGGCTGTAG</genome_strand>
        <mrna_strand>TTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGAGTCTTTAGGAACGGTAGGGGGACGCCTTTACTTTTCTTTGAGAGGCTATAAGACTTTAGG-AAAATTTCACCCTTTCATTCTTTCTTTCGTGCTACTACTTGAGTCCAATTGGTATCTAGGCGATACAAATTGGTATCTGACCATCTTCACTCTCTTTTGCAGATGGTTAGAACTAGAGCAACGACCACGTCAACACCAACACCGGCCAGACAAGAAACAACTGAGCCAGCCACTGGGGCTGTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E329287" ref_strand="+" ref_description="SGN-E329287 [cTOD-2-K13]">
      <seq>acctagcccatctggtactaaggcggtgacacctccaccaactgaggaagtggtaagagagggtgaggatggggagaatgaacaagtgcagaatgaggaattgccaccccaacctacccaagagatgatcaatcaggttcttgcttaccttagcgggttatctgatcaaggccaagcacctccagtgttttctgcactagcacctcaggctccggaggtacaacatgcgcctactgtgactccccgcatcgatacctcattggaaataggaacgtttccccgtctgactacagggcctataatgacaaatgatcagcatgaactttttagtaagttcttgaaattgaaacctcaagtctacaagggtgttgaatctgaggatgcctacgattttctggttgactgtcatgagctactacacaagatgggtatagtagaacggtttggtgttgagtttgtgacttatcagtttcaagggaacgccaaaatgtggtggcggtcacatgttgagtgtcaaccaacagaggcaccacgtatgacttgggcatcattct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="+" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="15005" stop="16158"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15305" g_stop="15858" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="554" r_length="554" r_score="0.921"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="+" ref_id="SGN-E329287" ref_strand="+">
        <total_alignment_score>0.921</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E329287" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15305" e_stop="15858"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCTAGCCCATCTGATACTAGGGCGGTGACTCCCCCACCAACTGAAGAAGTAATAAGAGAAGGGGAGGATGGGGAAAATGAACAAGTGTGGAATGAGGAATTGCCACCCCAACCTACCCCAGAAATGATCAATCAGGTTCTTGCTTATCTTAGCGGGTTATCTGATCAAGGCCAGACACCTCCAGTGTTTTCTGCACCAGCACCTCAGGCTCCGGAGGTACAACATGCGGCTACTGTGGCTCCCCGCATGGATGCCTCATTGGAAATAGGCACATTTCCTCGTCTGACTACAGGGCCTGTAATGACAAATGATCAGCATGAACTTTTCAGTAAGTTCTTGAATTTGAAACCTCCAGTCTTCAAGGGTGCTGAATCGAAGGATGCTTATGATTTTCTGGTTGATTGTCACGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTGAAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTAGCGGTCACATGTTGAGTTTCAACCAACAGAGGCACCACCTATGACTTGGGCCTCATTTT</genome_strand>
        <mrna_strand>ACCTAGCCCATCTGGTACTAAGGCGGTGACACCTCCACCAACTGAGGAAGTGGTAAGAGAGGGTGAGGATGGGGAGAATGAACAAGTGCAGAATGAGGAATTGCCACCCCAACCTACCCAAGAGATGATCAATCAGGTTCTTGCTTACCTTAGCGGGTTATCTGATCAAGGCCAAGCACCTCCAGTGTTTTCTGCACTAGCACCTCAGGCTCCGGAGGTACAACATGCGCCTACTGTGACTCCCCGCATCGATACCTCATTGGAAATAGGAACGTTTCCCCGTCTGACTACAGGGCCTATAATGACAAATGATCAGCATGAACTTTTTAGTAAGTTCTTGAAATTGAAACCTCAAGTCTACAAGGGTGTTGAATCTGAGGATGCCTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACGTATGACTTGGGCATCATTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E356614" ref_strand="+" ref_description="SGN-E356614 [cTOS-21-N3]">
      <seq>gcgaatccgctcttgaggactgaaacagagttgagtggcatatctggatagtgcacgaaacttagcctcataagcattaactgacaccctaccttgctctaggctcaagaactcatcccttttcttatccctcaaagtccgggggatatacttctccataaacaaactatagaatgaggcccaagtcataggtgatgcctctattggttgacactcgatatgtgaccgccaccacatttgggcgttcccttgaaactgataagtcacaaactccacaccaaaccgttctactatacccatcttgtgtagtagctcgtgacagtcaaccagaaaatcataagcatcctccgattcagcacccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattatagggacagtagtcaaacgtggaaatgtgcctatgtccaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataacccgctaagataagccagaacctgattgatcatctctggggtaggttggggtggcatttcctcattttgcacttgntcagtttccccatccctccctttctctattacttcctcagtcagtggaagagtcactgccctagtatcagatgggct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="-" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="16307" stop="15009"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15987" g_stop="15309" g_length="679"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="720" r_length="679" r_score="0.907"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="-" ref_id="SGN-E356614" ref_strand="+">
        <total_alignment_score>0.907</total_alignment_score>
        <cumulative_length_of_scored_exons>679</cumulative_length_of_scored_exons>
        <coverage percentage="0.943" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E356614" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15987" e_stop="15309"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTGGATAGTGCACGAAATTTAGCCTCATATGCATTGACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTCCATGGGATATACTTCTCCATAAACGAGCTAGAAAATGAGGCCCAAGTCATAGGTGGTGCCTCTGTTGGTTGAAACTCAACATGTGACCGCTACCACATTTTGGCGTTCCCTTGAAACTGATAAGTCACAAACTTCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAATCAACCAGAAAATCATAAGCATCCTTCGATTCAGCACCCTTGAAGACTGGAGGTTTCAAATTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTACAGGCCCTGTAGTCAGACGAGGAAATGTGCCTATTTCCAATGAGGCATCCATGCGGGGAGCCACAGTAGCCGCATGTTGTACCTCCGGAGCCTGAGGTGCTGGTGCAGAAAACACTGGAGGTGTCTGGCCTTGATCAGATAACCCGCTAAGATAAGCAAGAACCTGATTGATCATTTCTGGGGTAGGTTGGGGTGGCAATTCCTCATTCCACACTTGTTCATTTTCCCCAT-CCTCCCCTTCTCTTATTACTTCTTCAGTTGGTGGGGGAGTCACCGCCCTAGTATCAGATGGGCT</genome_strand>
        <mrna_strand>ATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACTGACACCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCTTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAACTATAGAATGAGGCCCAAGTCATAGGTGATGCCTCTATTGGTTGACACTCGATATGTGACCGCCACCACATTTGGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAGAAAATCATAAGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGGACAGTAGTCAAACGTGGAAATGTGCCTATGTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGNTCAGTTTCCCCATCCCTCCCTTTCTC-TATTACTTCCTCAGTCAGTGGAAGAGTCACTGCCCTAGTATCAGATGGGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E352401" ref_strand="+" ref_description="SGN-E352401 [cTOS-9-N1]">
      <seq>aatccgctcttgaggactgaaacagagttgagtggcatatctggatagtgcacgaaacttagcctcataagcattaactgacaccctaccttgctctaggctcaagaactcatcccttttcttatccctcaaagtccgggggatatacttctccataaacaaactatagaatgaggcccaagtcataggtgatgcctctattggttgacactcgatatgtgaccgccaccacatttgggcgttcccttgaaactgataagtcacaaactccacaccaaaccgttctactatacccatcttgtgtagtagctcgtgacagtcaaccagaaaatcataagcatcctccgattcagcacccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattatagggacagtagtcaaacgtggaaatgtgcctatgtccaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataacccgctaagataagccagaacctgattgatcatctctggggtaggttggggtgccatttccctcatttgcacttgttcagtttccccatcctccccttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="-" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="16307" stop="15062"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15987" g_stop="15362" g_length="626"/>
          <reference_exon_boundary r_type="cDNA" r_start="39" r_stop="664" r_length="626" r_score="0.912"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="-" ref_id="SGN-E352401" ref_strand="+">
        <total_alignment_score>0.912</total_alignment_score>
        <cumulative_length_of_scored_exons>626</cumulative_length_of_scored_exons>
        <coverage percentage="0.943" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E352401" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15987" e_stop="15362"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTGGATAGTGCACGAAATTTAGCCTCATATGCATTGACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTCCATGGGATATACTTCTCCATAAACGAGCTAGAAAATGAGGCCCAAGTCATAGGTGGTGCCTCTGTTGGTTGAAACTCAACATGTGACCGCTACCACATTTTGGCGTTCCCTTGAAACTGATAAGTCACAAACTTCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAATCAACCAGAAAATCATAAGCATCCTTCGATTCAGCACCCTTGAAGACTGGAGGTTTCAAATTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTACAGGCCCTGTAGTCAGACGAGGAAATGTGCCTATTTCCAATGAGGCATCCATGCGGGGAGCCACAGTAGCCGCATGTTGTACCTCCGGAGCCTGAGGTGCTGGTGCAGAAAACACTGGAGGTGTCTGGCCTTGATCAGATAACCCGCTAAGATAAGCAAGAACCTGATTGATCATTTCTGGGGTAGGTTGGGGTGGCAATT-CCTCATTCCACACTTGTTCATTTTCCCCATCCTCCCCTTCT</genome_strand>
        <mrna_strand>ATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACTGACACCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCTTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAACTATAGAATGAGGCCCAAGTCATAGGTGATGCCTCTATTGGTTGACACTCGATATGTGACCGCCACCACATTTGGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAGAAAATCATAAGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGGACAGTAGTCAAACGTGGAAATGTGCCTATGTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGCCATTTCCCTCATT-TGCACTTGTTCAGTTTCCCCATCCTCCCCTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E245958" ref_strand="+" ref_description="SGN-E245958 [cLEF-51-E16]">
      <seq>caggctccggaggtacaatatgcggctactatggctccccgcatggatgttccattggaaataggcacgtttccaagtctgactactgggcctataatgacaaatgatcagcatatattttcagtaagttcttgaaattgaaacctccagtcttcaaaggtgcggaatcggaggatgcttacgattttctggtggactgtcatgagctactacacaagaagggtatagtagaacggtttggtgttgagttcgtgagttatcagtttcaagggaacgccaaaatgtggtggcggtcacatattgagtgtcaaccaacagaagcaccacctatgacttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="+" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="15210" stop="16148"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15510" g_stop="15848" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="338" r_length="338" r_score="0.912"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="+" ref_id="SGN-E245958" ref_strand="+">
        <total_alignment_score>0.912</total_alignment_score>
        <cumulative_length_of_scored_exons>339</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E245958" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15510" e_stop="15848"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGCTCCGGAGGTACAACATGCGGCTACTGTGGCTCCCCGCATGGATGCCTCATTGGAAATAGGCACATTTCCTCGTCTGACTACAGGGCCTGTAATGACAAATGATCAGCATGAACTTTTCAGTAAGTTCTTGAATTTGAAACCTCCAGTCTTCAAGGGTGCTGAATCGAAGGATGCTTATGATTTTCTGGTTGATTGTCACGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTGAAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTAGCGGTCACATGTTGAGTTTCAACCAACAGAGGCACCACCTATGACTTGG</genome_strand>
        <mrna_strand>CAGGCTCCGGAGGTACAATATGCGGCTACTATGGCTCCCCGCATGGATGTTCCATTGGAAATAGGCACGTTTCCAAGTCTGACTACTGGGCCTATAATGACAAATGATCAGCAT-ATATTTTCAGTAAGTTCTTGAAATTGAAACCTCCAGTCTTCAAAGGTGCGGAATCGGAGGATGCTTACGATTTTCTGGTGGACTGTCATGAGCTACTACACAAGAAGGGTATAGTAGAACGGTTTGGTGTTGAGTTCGTGAGTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATATTGAGTGTCAACCAACAGAAGCACCACCTATGACTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E368762" ref_strand="+" ref_description="SGN-E368762 [TUS-22-P2]">
      <seq>gtctcacccaattcttcactgtctcaatcttacaaggatccaccatcactccatccttagaaaccacgtgccccaagaaggacactgcatctatccaaaactcacacttagagaacttggcataaagctttttctccctcaacatttctaatacaattctcaaatgctcctcatgttccttcttactattagagtatatcagtatatcatcaataaacatgatgacaaagagatccaaatatggcttaaaatcccgttcatcaagctcatgaacgcagcaggggcattcgtaagaccaaaagacatcactacaaattcgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagagaagacacaagcaccttgtaactgatcgaacaagtcatcaatgcgaggaagtggatacttgttcttaatagttaccttgttcaactgccggtagtctatgcacatccgaaaactcccatccttcttcttcacaaaccaaaccggagcaccccaaggagatgcacttggtctaatgaagactttgctcaaaaactcttgaagttgggcctttaactctcttaactccgcgggagccattctataagggggtatagaaatggggcgagtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="-" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="17007" stop="15735"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16714" g_stop="16034" g_length="681"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="679" r_length="679" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="-" ref_id="SGN-E368762" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>681</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E368762" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16714" e_stop="16034"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTTGTCCAACTCTTTACTGTCTCAATCTTAGAAGGATCAACCATCACTCCATCCTTAGAAACCACGTGTCCCAAGAAGGACACTGCATCTAGCCCAAAACTCACACTTAGAGAATTTGGCATAAAGCTTTTTCTCCCTCAACGTTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTTCTTGCTCTTTGAGTATACCAATATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAAAGCAGCAGGGGCATTCGTAAGACCAAAAGACATTACTACAAATTCGTAATGCCCATACCTTGTTCGAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATCTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACACGAACCTTGTAACTAATCGAACAAATCATCAATGCGAGGAAGAGGATACTTGTTTTTTATGGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTCACAAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGTTCAACAACTCTTGAAGTTGGGCTTTTAACTCTTTTAACTCCGTGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTA</genome_strand>
        <mrna_strand>GTCTCACCCAATTCTTCACTGTCTCAATCTTACAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTA-TCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCTAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTATTAGAGTATATCAGTATATCATCAATAAACATGATGACAAAGAGATCCAAATATGGCTT-AAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGTGGATACTTGTTCTTAATAGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTCACAAACCAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGACTTTGCTCAAAAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E379315" ref_strand="+" ref_description="SGN-E379315 [TUS-1-J2]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatgcgaggaagaggatacttgttctttatggttaccttgttncactgccggtagcctatgcacatccgaaaactccaatccttcttctttacaaacaaaaccggagcaccccaaggagatgcagttggtctaatgaagcctttgctcacaactctttgaagtggtcttttaactctcttaactctgcgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="-" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="17085" stop="15772"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16785" g_stop="16072" g_length="714"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="712" r_length="712" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="-" ref_id="SGN-E379315" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>714</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E379315" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16785" e_stop="16072"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACAAATCGACGGTAATAACTAGCTAAACCAACAAAGCTCCTTATTTCTGACACATTAGTGGGTCTTGTCCAACTCTTTACTGTCTCAATCTTAGAAGGATCAACCATCACTCCATCCTTAGAAACCACGTGTCCCAAGAAGGACACTGCATCTAGCCCAAAACTCACACTTAGAGAATTTGGCATAAAGCTTTTTCTCCCTCAACGTTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTTCTTGCTCTTTGAGTATACCAATATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAAAGCAGCAGGGGCATTCGTAAGACCAAAAGACATTACTACAAATTCGTAATGCCCATACCTTGTTCGAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATCTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACACGAACCTTGTAACTAATCGAACAAATCATCAATGCGAGGAAGAGGATACTTGTTTTTTATGGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTCACAAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGTTCAACAACTCTTGAAGTTGGGCTTTTAACTCTTTTAACTCCGTGG</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAG-CCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTNCACTGCCGGTAGCCTATGCACATCCGAAAACTCCAATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCAGTTGGTCTAATGAAGCCTTTGCTC-ACAACTCTTTGAAGTGGTCTTTTAACTCTCTTAACTCTGCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E375319" ref_strand="+" ref_description="SGN-E375319 [TUS-15-F18]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatgcgaggaagaggatacttgttctttatggttaccttgttcaactgccggtagcctatgcacatccgaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="-" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="17085" stop="15889"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16785" g_stop="16189" g_length="597"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="596" r_length="596" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="-" ref_id="SGN-E375319" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>597</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E375319" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16785" e_stop="16189"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACAAATCGACGGTAATAACTAGCTAAACCAACAAAGCTCCTTATTTCTGACACATTAGTGGGTCTTGTCCAACTCTTTACTGTCTCAATCTTAGAAGGATCAACCATCACTCCATCCTTAGAAACCACGTGTCCCAAGAAGGACACTGCATCTAGCCCAAAACTCACACTTAGAGAATTTGGCATAAAGCTTTTTCTCCCTCAACGTTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTTCTTGCTCTTTGAGTATACCAATATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAAAGCAGCAGGGGCATTCGTAAGACCAAAAGACATTACTACAAATTCGTAATGCCCATACCTTGTTCGAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATCTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACACGAACCTTGTAACTAATCGAACAAATCATCAATGCGAGGAAGAGGATACTTGTTTTTTATGGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAAC</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAG-CCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGCCTATGCACATCCGAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E204434" ref_strand="+" ref_description="SGN-E204434 [cLEC-13-J16]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="-" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="17085" stop="15959"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16785" g_stop="16259" g_length="527"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="526" r_length="526" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="-" ref_id="SGN-E204434" ref_strand="+">
        <total_alignment_score>0.922</total_alignment_score>
        <cumulative_length_of_scored_exons>527</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E204434" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16785" e_stop="16259"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACAAATCGACGGTAATAACTAGCTAAACCAACAAAGCTCCTTATTTCTGACACATTAGTGGGTCTTGTCCAACTCTTTACTGTCTCAATCTTAGAAGGATCAACCATCACTCCATCCTTAGAAACCACGTGTCCCAAGAAGGACACTGCATCTAGCCCAAAACTCACACTTAGAGAATTTGGCATAAAGCTTTTTCTCCCTCAACGTTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTTCTTGCTCTTTGAGTATACCAATATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAAAGCAGCAGGGGCATTCGTAAGACCAAAAGACATTACTACAAATTCGTAATGCCCATACCTTGTTCGAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATCTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACACGAACCTTGTAACTAATCGAACAAATCATCAATG</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAG-CCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E240817" ref_strand="+" ref_description="SGN-E240817 [cLED-24-J5]">
      <seq>gtctcacccatttcttcactgtctcaatcttaccaggatccaccatcactccatccttagaaaccacgtgccccaagaaggacactgcatctatccaaaactcacacttagagaacttggcataaagctttttctccctcaacatttctaatacaattctcaaatgctcctcatgttccttcttactattagaggatatcagtatatcatcaatgaacatgatgacgcagagatccaaatatggcttaaaatcccgttcatcaagctcatgaacgcagcaggggcattcgtaagaccaaaagacatcactacaaattcgtaatgcccatacctggttctaaaagcagtctttggcaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="-" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="17007" stop="16055"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16714" g_stop="16355" g_length="360"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="358" r_length="358" r_score="0.906"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="-" ref_id="SGN-E240817" ref_strand="+">
        <total_alignment_score>0.906</total_alignment_score>
        <cumulative_length_of_scored_exons>360</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E240817" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16714" e_stop="16355"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTTGTCCAACTCTTTACTGTCTCAATCTTAGAAGGATCAACCATCACTCCATCCTTAGAAACCACGTGTCCCAAGAAGGACACTGCATCTAGCCCAAAACTCACACTTAGAGAATTTGGCATAAAGCTTTTTCTCCCTCAACGTTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTTCTTGCTCTTTGAGTATACCAATATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAAAGCAGCAGGGGCATTCGTAAGACCAAAAGACATTACTACAAATTCGTAATGCCCATACCTTGTTCGAAAAGCAGTCTTTGGCACA</genome_strand>
        <mrna_strand>GTCTCACCCATTTCTTCACTGTCTCAATCTTACCAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTA-TCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCTAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTATTAGAGGATATCAGTATATCATCAATGAACATGATGACGCAGAGATCCAAATATGGCTT-AAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E577888" ref_strand="+" ref_description="SGN-E577888 [LE08BA01]">
      <seq>ctacatctcctaccatacaatgcttcaaatggagccatatcaatgcttgattgatagctattattgtatgaaaactccgctaagggtaggaagctatcccaatgaccaccaaactctatcacacacgcacgaagcatattctccaacacttgaatcgttcgctcagactgaccatcgggagaactagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="-" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="18566" stop="17789"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18266" g_stop="18090" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="-" ref_id="SGN-E577888" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>177</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E577888" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18266" e_stop="18090"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACATCTCCTACCATACAATGCTTCAAATGGAGCCATATCAATGCTTGAGTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAAGAAGTTATCCCAATGGCCACCAAATTCTATTACACACGCACGAAGCATATCCTCCAACACTTGAATCGTTCGCTCAGACTGGCCATCG</genome_strand>
        <mrna_strand>CTACATCTCCTACCATACAATGCTTCAAATGGAGCCATATCAATGCTTGATTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAGGAAGCTATCCCAATGACCACCAAACTCTATCACACACGCACGAAGCATATTCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E707410" ref_strand="+" ref_description="SGN-E707410 [FA32DF11]">
      <seq>cgttttgagacgggtgccacctcacgaacttaacgctatgagttcaccttggccatttgtagcttggggaatggatgtcatcagttctatagagtctaccgcttctaatggacatagattcattttggttgccattgattatttcaccaagtgggtggaagcaaccccttacaagtcggtaaccaagaaagtggtggtcgattttgttcgcaacaatctgatatgcagatttggagttccagaatccatcattactgataacggggcaaatctcaacagtcatttgatgaaacagatatatgaacaatttaagttattcatcgaaagtcaactgcttatcgcccccaaatgaacagagctgtagaagccgccaacaaaaatatcaagaagattttgaggaaaatgattgacaaacagcggggttggcatgaaatgttgccatatgcttttctaggttatcgaacgacggtcagaacatcgacttgggctactccatacttgctagtatatggaacagaggcagtcgtgcctgttgaagtcgagataccgtcattgcggatcatccaagaagctgaattaagtaacgccgaatggcttagcaaacagattgatcaactagccttaattgataagaagagaatagttgcgtttgccatggcaagttgtacagacagagaatgactcgcgcttttcacaaaagagtaagagccaggaattttgaagttggtcagttggttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="+" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="46544" stop="47884"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46844" g_stop="47584" g_length="741"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="739" r_length="739" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="+" ref_id="SGN-E707410" ref_strand="+">
        <total_alignment_score>0.915</total_alignment_score>
        <cumulative_length_of_scored_exons>741</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E707410" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46844" e_stop="47584"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGATTTGATACGGGTGCCACCTCACGAACTTAATGCTATGAGTTCACCTTGGCCATTTGTAGCTTGGGGAATGGATGTCATCGGTCCTATAGAGCCAGCCGCTTCTAATGGACACAGATTCATTTTGGTTGCCATCGATTATTTCACCAAGTGGGTGGAAGCAGCCTCTTACAAATCGGTAACCAAGAAAGTGGTGGCCGACTTTGTCCGCAACAATCTGATCTGCCGATTTGGAGTTCCAGAATCCATCATCACTGATAACGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGAACAATTTAAGATTATTCACCGAAGGTCAACTGCTTATCGTCCTCAAATGAACGGAGCTGTAGAGGCCGCCAACAAGAACATCAAGAAGATTCTGAGGAAAATGATTGACAAGCAGCGGGGTTGGCATGAAATATTGCCATATGCTCTACTGGGTTATCGAACGACGGTTAGAACATCAACTGGGGCTACTCCATACTTGCTAGTATACAGAACAGAAGCAGTCGTACCTGTTGTAGTCGAGATACCTTCACTGAGGATCATCCAAGAAGCTGAGCTAAGTAATGCTGAGTGGGTTAGCAAACAGATTGATCAACTAGCCTTGATTGATGAGAAGAGAATGGTCGCCGTTTGCCATGGCCAGTTGTATAGACAGAGAATGACTCGCGCTTTTCACAAAAGAGTAAGAGCCAGAAATTTTGAAGTTGGTCAGTTGGTTCT</genome_strand>
        <mrna_strand>CGTTTTGAGACGGGTGCCACCTCACGAACTTAACGCTATGAGTTCACCTTGGCCATTTGTAGCTTGGGGAATGGATGTCATCAGTTCTATAGAGTCTACCGCTTCTAATGGACATAGATTCATTTTGGTTGCCATTGATTATTTCACCAAGTGGGTGGAAGCAACCCCTTACAAGTCGGTAACCAAGAAAGTGGTGGTCGATTTTGTTCGCAACAATCTGATATGCAGATTTGGAGTTCCAGAATCCATCATTACTGATAACGGGGCAAATCTCAACAGTCATTTGATGAAACAGATATATGAACAATTTAAG-TTATTCATCGAAAGTCAACTGCTTATCGCCCCCAAATGAACAGAGCTGTAGAAGCCGCCAACAAAAATATCAAGAAGATTTTGAGGAAAATGATTGACAAACAGCGGGGTTGGCATGAAATGTTGCCATATGCTTTTCTAGGTTATCGAACGACGGTCAGAACATCGACTTGGGCTACTCCATACTTGCTAGTATATGGAACAGAGGCAGTCGTGCCTGTTGAAGTCGAGATACCGTCATTGCGGATCATCCAAGAAGCTGAATTAAGTAACGCCGAATGGCTTAGCAAACAGATTGATCAACTAGCCTTAATTGATAAGAAGAGAATAGTTG-CGTTTGCCATGGCAAGTTGTACAGACAGAGAATGACTCGCGCTTTTCACAAAAGAGTAAGAGCCAGGAATTTTGAAGTTGGTCAGTTGGTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E355122" ref_strand="+" ref_description="SGN-E355122 [cTOS-18-H18]">
      <seq>aaaagtgggaaatggatgtcattggtcctatagagccaaccgcttctaatggacacagattcattttggttgccactgattattttaccaagtgggttgaagcagcctcttacaagtcggtagccaagaaagtggtagccaattttgtccgcaacaatctgatatgcagatttggagttccagaatccatcattactgataacggtgcaaatctcaacagtcatctgatgaaagagatatgtgatcaattcaagattattcaccggaggtcaactgcttatcgccctcaaatgaacggagttgtagaggccgccaacaagaatatcaagaaaattttgaggaaaatgattgacaagcagcgaggttggcatgaaatattgtcgtatgctctactaggttatcgaacgacggtcagaacatcgactggggctactccatacttgctagtatacggaacagaagcagtcgtacctattgaagtcgacatgccgtcactaaggatcatccaagaagctgaattaagtaacgctgagtgggttagcaaacggattgatcaactaactttgattgatgagaagaggatggtcgctgtttgccattgccagttgtatagacaaagaatgactcgcgcttttcacaaaagagtaagagccagaattttgaagttggccagttggttcttaagcgtatttttcctcatcaagatgagtacaaaggaaagttcgcaccaaactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="+" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="46608" stop="47938"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46903" g_stop="47638" g_length="736"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="735" r_length="735" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="+" ref_id="SGN-E355122" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>736</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E355122" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46903" e_stop="47638"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCTTGGGGAATGGATGTCATCGGTCCTATAGAGCCAGCCGCTTCTAATGGACACAGATTCATTTTGGTTGCCATCGATTATTTCACCAAGTGGGTGGAAGCAGCCTCTTACAAATCGGTAACCAAGAAAGTGGTGGCCGACTTTGTCCGCAACAATCTGATCTGCCGATTTGGAGTTCCAGAATCCATCATCACTGATAACGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGAACAATTTAAGATTATTCACCGAAGGTCAACTGCTTATCGTCCTCAAATGAACGGAGCTGTAGAGGCCGCCAACAAGAACATCAAGAAGATTCTGAGGAAAATGATTGACAAGCAGCGGGGTTGGCATGAAATATTGCCATATGCTCTACTGGGTTATCGAACGACGGTTAGAACATCAACTGGGGCTACTCCATACTTGCTAGTATACAGAACAGAAGCAGTCGTACCTGTTGTAGTCGAGATACCTTCACTGAGGATCATCCAAGAAGCTGAGCTAAGTAATGCTGAGTGGGTTAGCAAACAGATTGATCAACTAGCCTTGATTGATGAGAAGAGAATGGTCGCCGTTTGCCATGGCCAGTTGTATAGACAGAGAATGACTCGCGCTTTTCACAAAAGAGTAAGAGCCAGAAATTTTGAAGTTGGTCAGTTGGTTCTTAAGCGTATTTTTCCTCATCAAGACGAGCAAAAAGGAAAGTTCGCACCAAACTG</genome_strand>
        <mrna_strand>AAAAGTGGGAAATGGATGTCATTGGTCCTATAGAGCCAACCGCTTCTAATGGACACAGATTCATTTTGGTTGCCACTGATTATTTTACCAAGTGGGTTGAAGCAGCCTCTTACAAGTCGGTAGCCAAGAAAGTGGTAGCCAATTTTGTCCGCAACAATCTGATATGCAGATTTGGAGTTCCAGAATCCATCATTACTGATAACGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGATCAATTCAAGATTATTCACCGGAGGTCAACTGCTTATCGCCCTCAAATGAACGGAGTTGTAGAGGCCGCCAACAAGAATATCAAGAAAATTTTGAGGAAAATGATTGACAAGCAGCGAGGTTGGCATGAAATATTGTCGTATGCTCTACTAGGTTATCGAACGACGGTCAGAACATCGACTGGGGCTACTCCATACTTGCTAGTATACGGAACAGAAGCAGTCGTACCTATTGAAGTCGACATGCCGTCACTAAGGATCATCCAAGAAGCTGAATTAAGTAACGCTGAGTGGGTTAGCAAACGGATTGATCAACTAACTTTGATTGATGAGAAGAGGATGGTCGCTGTTTGCCATTGCCAGTTGTATAGACAAAGAATGACTCGCGCTTTTCACAAAAGAGTAAGAGCCAG-AATTTTGAAGTTGGCCAGTTGGTTCTTAAGCGTATTTTTCCTCATCAAGATGAGTACAAAGGAAAGTTCGCACCAAACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E350936" ref_strand="+" ref_description="SGN-E350936 [cTOS-7-D2]">
      <seq>aaaagtgggaaatggatgtcattggtcctatagagccaaccgcttctaatggacacagattcattttggttgccactgattattttaccaagtgggttgaagcagcctcttacaagtcggtagccaagaaagtggtagccaattttgtccgcaacaatctgatatgcagatttggagttccagaatccatcattactgataacggtgcaaatctcaacagtcatctgatgaaagagatatgtgatcaattcaagattattcaccggaggtcaactgcttatcgccctcaaatgaacggagttgtagaggccgccaacaagaatatcaagaaaattttgaggaaaatgattgacaagcagcgaggttggcatgaaatattgtcgtatgctctactaggttatcgaacgacggtcagaacatcgactggggctactccatacttgctagtatacggaacagaagcagtcgtacctattgaagtcgacatgccgtcactaaggatcatccaagaagctgaattaagtaacgctgagtgggttagcaaacggattgatcaactaactttgattgatgagaagaggatggtcgctgtttgccattgccagttgtatagacaaagaatgactcgcgcttttcancaaagagtaagagccagaattttgaaagtggccagttggttcttaagcgtatttttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="+" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="46608" stop="47898"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46903" g_stop="47598" g_length="696"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="695" r_length="695" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="+" ref_id="SGN-E350936" ref_strand="+">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>696</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E350936" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46903" e_stop="47598"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCTTGGGGAATGGATGTCATCGGTCCTATAGAGCCAGCCGCTTCTAATGGACACAGATTCATTTTGGTTGCCATCGATTATTTCACCAAGTGGGTGGAAGCAGCCTCTTACAAATCGGTAACCAAGAAAGTGGTGGCCGACTTTGTCCGCAACAATCTGATCTGCCGATTTGGAGTTCCAGAATCCATCATCACTGATAACGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGAACAATTTAAGATTATTCACCGAAGGTCAACTGCTTATCGTCCTCAAATGAACGGAGCTGTAGAGGCCGCCAACAAGAACATCAAGAAGATTCTGAGGAAAATGATTGACAAGCAGCGGGGTTGGCATGAAATATTGCCATATGCTCTACTGGGTTATCGAACGACGGTTAGAACATCAACTGGGGCTACTCCATACTTGCTAGTATACAGAACAGAAGCAGTCGTACCTGTTGTAGTCGAGATACCTTCACTGAGGATCATCCAAGAAGCTGAGCTAAGTAATGCTGAGTGGGTTAGCAAACAGATTGATCAACTAGCCTTGATTGATGAGAAGAGAATGGTCGCCGTTTGCCATGGCCAGTTGTATAGACAGAGAATGACTCGCGCTTTTCACAAAAGAGTAAGAGCCAGAAATTTTGAAGTTGGTCAGTTGGTTCTTAAGCGTATTTTTC</genome_strand>
        <mrna_strand>AAAAGTGGGAAATGGATGTCATTGGTCCTATAGAGCCAACCGCTTCTAATGGACACAGATTCATTTTGGTTGCCACTGATTATTTTACCAAGTGGGTTGAAGCAGCCTCTTACAAGTCGGTAGCCAAGAAAGTGGTAGCCAATTTTGTCCGCAACAATCTGATATGCAGATTTGGAGTTCCAGAATCCATCATTACTGATAACGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGATCAATTCAAGATTATTCACCGGAGGTCAACTGCTTATCGCCCTCAAATGAACGGAGTTGTAGAGGCCGCCAACAAGAATATCAAGAAAATTTTGAGGAAAATGATTGACAAGCAGCGAGGTTGGCATGAAATATTGTCGTATGCTCTACTAGGTTATCGAACGACGGTCAGAACATCGACTGGGGCTACTCCATACTTGCTAGTATACGGAACAGAAGCAGTCGTACCTATTGAAGTCGACATGCCGTCACTAAGGATCATCCAAGAAGCTGAATTAAGTAACGCTGAGTGGGTTAGCAAACGGATTGATCAACTAACTTTGATTGATGAGAAGAGGATGGTCGCTGTTTGCCATTGCCAGTTGTATAGACAAAGAATGACTCGCGCTTTTCANCAAAGAGTAAGAGCCAG-AATTTTGAAAGTGGCCAGTTGGTTCTTAAGCGTATTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E353644" ref_strand="+" ref_description="SGN-E353644 [cTOS-10-I24]">
      <seq>aaaagtgggaaatggatgtcattggtcctatagagccaaccgcttctaatggacacagattcattttggttgccactgattattttaccaagtgggttgaagcagcctcttacaagtcggtagccaagaaagtggtagccaattttgtccgcaacaatctgatatgcagatttggagttccagaatccatcattactgataacggtgcaaatctcaacagtcatctgatgaaagagatatgtgatcaattcaagattattcaccggaggtcaactgcttatcgccctcaaatgaacggagttgtagaggccgccaacaagaatatcaagaaaattttgaggaaaatgattgacaagcagcgaggttggcatgaaatattgtcgtatgctctactaggttatcgaacgacggtcagaacatcgactggggctactccatacttgctagtatacggaacagaagcagtcgtacctattgaagtcgacatgccgtcactaaggatcatccaagaagctgaattaagtaacgctgagtgggttagcaaacggattgatcaactaactttgattgatgagaagaggatggtcgctgtttgccattgccagttgtatagacaaagaatgactcgcgcttttcacaaaagagtaagagccagaattttgaagttggccagttggttcttaagcgtattttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="+" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="46608" stop="47897"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46903" g_stop="47597" g_length="695"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="694" r_length="694" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="+" ref_id="SGN-E353644" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>695</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E353644" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46903" e_stop="47597"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCTTGGGGAATGGATGTCATCGGTCCTATAGAGCCAGCCGCTTCTAATGGACACAGATTCATTTTGGTTGCCATCGATTATTTCACCAAGTGGGTGGAAGCAGCCTCTTACAAATCGGTAACCAAGAAAGTGGTGGCCGACTTTGTCCGCAACAATCTGATCTGCCGATTTGGAGTTCCAGAATCCATCATCACTGATAACGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGAACAATTTAAGATTATTCACCGAAGGTCAACTGCTTATCGTCCTCAAATGAACGGAGCTGTAGAGGCCGCCAACAAGAACATCAAGAAGATTCTGAGGAAAATGATTGACAAGCAGCGGGGTTGGCATGAAATATTGCCATATGCTCTACTGGGTTATCGAACGACGGTTAGAACATCAACTGGGGCTACTCCATACTTGCTAGTATACAGAACAGAAGCAGTCGTACCTGTTGTAGTCGAGATACCTTCACTGAGGATCATCCAAGAAGCTGAGCTAAGTAATGCTGAGTGGGTTAGCAAACAGATTGATCAACTAGCCTTGATTGATGAGAAGAGAATGGTCGCCGTTTGCCATGGCCAGTTGTATAGACAGAGAATGACTCGCGCTTTTCACAAAAGAGTAAGAGCCAGAAATTTTGAAGTTGGTCAGTTGGTTCTTAAGCGTATTTTT</genome_strand>
        <mrna_strand>AAAAGTGGGAAATGGATGTCATTGGTCCTATAGAGCCAACCGCTTCTAATGGACACAGATTCATTTTGGTTGCCACTGATTATTTTACCAAGTGGGTTGAAGCAGCCTCTTACAAGTCGGTAGCCAAGAAAGTGGTAGCCAATTTTGTCCGCAACAATCTGATATGCAGATTTGGAGTTCCAGAATCCATCATTACTGATAACGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGATCAATTCAAGATTATTCACCGGAGGTCAACTGCTTATCGCCCTCAAATGAACGGAGTTGTAGAGGCCGCCAACAAGAATATCAAGAAAATTTTGAGGAAAATGATTGACAAGCAGCGAGGTTGGCATGAAATATTGTCGTATGCTCTACTAGGTTATCGAACGACGGTCAGAACATCGACTGGGGCTACTCCATACTTGCTAGTATACGGAACAGAAGCAGTCGTACCTATTGAAGTCGACATGCCGTCACTAAGGATCATCCAAGAAGCTGAATTAAGTAACGCTGAGTGGGTTAGCAAACGGATTGATCAACTAACTTTGATTGATGAGAAGAGGATGGTCGCTGTTTGCCATTGCCAGTTGTATAGACAAAGAATGACTCGCGCTTTTCACAAAAGAGTAAGAGCCAG-AATTTTGAAGTTGGCCAGTTGGTTCTTAAGCGTATTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E313393" ref_strand="+" ref_description="SGN-E313393 [cTOA-13-K15]">
      <seq>tcaaaactcacaatttcgccaaccactcattttatttcttcataaaaaccctaaaaacacaatcgaaccccaaaaattggtgttgaaaggaagagtaacgatttggttttgaattcaagttcaaattcagagcatggggtgaagaagattagaagaagaagatatacaggtgacgaatttcgtgatggagtgggatagcaattcggatttgagtggagaagaagaagatggcgttattgaagaagaagaagttgaggatgaattagaggaactagggtttatgttgagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="+" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="70518" stop="71406"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70818" g_stop="71106" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="289" r_length="289" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="+" ref_id="SGN-E313393" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>289</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E313393" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70818" e_stop="71106"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAAACTCACAATTTCGCCAACCACTCATTTTATTTCTTCATAAAAACCCTAAAAACACAATCGAACCCCAAAAATTGGTGTTGAAAGGAAGAGTAACGATTTGGTTTTGAATTCAAGTTCAAATTCAGAGCATGGGGTGAAGAAGATTAGAAGAAGAAGATATACAGGTGACGAATTTCGTGATGGAGTGGGATAGCAATTCGGATTTGAGTGGAGAAGAAGAAGATGGCGTTATTGAAGAAGAAGAAGTTGAGGATGAATTAGAGGAACTAGGGTTTATGTTGAGT</genome_strand>
        <mrna_strand>TCAAAACTCACAATTTCGCCAACCACTCATTTTATTTCTTCATAAAAACCCTAAAAACACAATCGAACCCCAAAAATTGGTGTTGAAAGGAAGAGTAACGATTTGGTTTTGAATTCAAGTTCAAATTCAGAGCATGGGGTGAAGAAGATTAGAAGAAGAAGATATACAGGTGACGAATTTCGTGATGGAGTGGGATAGCAATTCGGATTTGAGTGGAGAAGAAGAAGATGGCGTTATTGAAGAAGAAGAAGTTGAGGATGAATTAGAGGAACTAGGGTTTATGTTGAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E249770" ref_strand="+" ref_description="SGN-E249770 [cLEF-57-O6]">
      <seq>gaattaactactcttgaagcagcagcttggaggaagctaactgttggaggtactgttgaaccttctcgttgcaacttcagtgcatgtgcagtagggaaccgtgttgtactctttggtggagagggggtaaacatgcaaccgatgaatgatacttttgtattagacttgaattccagcaatccagagtggaaacatgtcaaagttagttctcctcctcctggacgttgggggcacacactctcttgtgtgaatggatctcatcttgttgtgtttggtggatatggaaggcagggtctcttgaatgacgtctttgtgctggatttggatgccaaacaaccaacatggcgtgaaatctctagcttggcgcctccgcttccaagatcttggcacagctcctgtactttggatgggaccaagttgatagtctctggtggttgtacagattctggtgtacttctcagtgatactttcctgcttgatctgtctatagagaagcctgtgtggcgtgaaatagcagtgacgtggactccaccttctcgtttgggccacacgctgtctgtttatggaagcaggaaaattcttatgtttgggggtctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="+" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="84845" stop="86041"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85145" g_stop="85741" g_length="597"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="597" r_length="597" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="+" ref_id="SGN-E249770" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>597</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E249770" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85145" e_stop="85741"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATTAACTACTCTTGAAGCAGCAGCTTGGAGGAAGCTAACTGTTGGAGGTACTGTTGAACCTTCTCGTTGCAACTTCAGTGCATGTGCAGTAGGGAACCGTGTTGTACTCTTTGGTGGAGAGGGGGTAAACATGCAACCGATGAATGATACTTTTGTATTAGACTTGAATTCCAGCAATCCAGAGTGGAAACATGTCAAAGTTAGTTCTCCTCCTCCTGGACGTTGGGGGCACACACTCTCTTGTGTGAATGGATCTCATCTTGTTGTGTTTGGTGGATATGGAAGGCAGGGTCTCTTGAATGACGTCTTTGTGCTGGATTTGGATGCCAAACAACCAACATGGCGTGAAATCTCTAGCTTGGCGCCTCCGCTTCCAAGATCTTGGCACAGCTCCTGTACTTTGGATGGGACCAAGTTGATAGTCTCTGGTGGTTGTACAGATTCTGGTGTACTTCTCAGTGATACTTTCCTGCTTGATCTGTCTATAGAGAAGCCTGTGTGGCGTGAAATAGCAGTGACGTGGACTCCACCTTCTCGTTTGGGCCACACGCTGTCTGTTTATGGAGGCAGGAAAATTCTTATGTTTGGGGGTCTT</genome_strand>
        <mrna_strand>GAATTAACTACTCTTGAAGCAGCAGCTTGGAGGAAGCTAACTGTTGGAGGTACTGTTGAACCTTCTCGTTGCAACTTCAGTGCATGTGCAGTAGGGAACCGTGTTGTACTCTTTGGTGGAGAGGGGGTAAACATGCAACCGATGAATGATACTTTTGTATTAGACTTGAATTCCAGCAATCCAGAGTGGAAACATGTCAAAGTTAGTTCTCCTCCTCCTGGACGTTGGGGGCACACACTCTCTTGTGTGAATGGATCTCATCTTGTTGTGTTTGGTGGATATGGAAGGCAGGGTCTCTTGAATGACGTCTTTGTGCTGGATTTGGATGCCAAACAACCAACATGGCGTGAAATCTCTAGCTTGGCGCCTCCGCTTCCAAGATCTTGGCACAGCTCCTGTACTTTGGATGGGACCAAGTTGATAGTCTCTGGTGGTTGTACAGATTCTGGTGTACTTCTCAGTGATACTTTCCTGCTTGATCTGTCTATAGAGAAGCCTGTGTGGCGTGAAATAGCAGTGACGTGGACTCCACCTTCTCGTTTGGGCCACACGCTGTCTGTTTATGGAAGCAGGAAAATTCTTATGTTTGGGGGTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E727196" ref_strand="+" ref_description="SGN-E727196 [LA14AA11]">
      <seq>cagagtggaaacatgtcaaagttagttctcctcctcctggacgttgggggcacacactctcttgtgtgaatggatctcatcttgttgtgtttggtggatatggaaggcagggtctcttgaatgacgtctttgtgctggatttggatgccaaacaaccaacatggcgtgaaatctctagcttggcgcctccgcttccaagatcttggcacagctcctgtactttggatgggaccaagttgatagtctctggtggttgtacagattctggtgtacttctcagtgatactttcctgcttgatctgtctatagagaagcctgtgtggcgtgaaatagcagtgacgtggactccaccttctcgtttgggccacacgctgtctgtttatggaggcaggaaaattcttatgtttgggggtcttgccaagagtggtcctgtgcgttttcgatcaagtgatgtgtttaccttggatctgagtgaggaagaaccctgctggagatgtgttacaggaagtggaatgcctggtgcgggaaatcctggaggtcttgctccttccccaaggcttgatcatgtggcattaagtctccctggtggcagagttctggtctttggtgggtccattacttctggtctccactcaggatcacagctctacattttggatccaactgaagagaagccaacatggaggatattgaatgtgactggtcgggctccaagtattgcttggggacataatacatgtgttgttggcggaactagagcaatagtcatcggaggtcaaactggggaagactggatgctcggtgagttgcatgaactctctttagcaagctctgttgttgtatgaataaaagaaaggtaataatcaagagaaagtgttgtactgaaaatttttgcctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="+" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="85026" stop="86522"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85326" g_stop="86222" g_length="897"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="898" r_length="898" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="+" ref_id="SGN-E727196" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>897</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E727196" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85326" e_stop="86222"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAGTGGAAACATGTCAAAGTTAGTTCTCCTCCTCCTGGACGTTGGGGGCACACACTCTCTTGTGTGAATGGATCTCATCTTGTTGTGTTTGGTGGATATGGAAGGCAGGGTCTCTTGAATGACGTCTTTGTGCTGGATTTGGATGCCAAACAACCAACATGGCGTGAAATCTCTAGCTTGGCGCCTCCGCTTCCAAGATCTTGGCACAGCTCCTGTACTTTGGATGGGACCAAGTTGATAGTCTCTGGTGGTTGTACAGATTCTGGTGTACTTCTCAGTGATACTTTCCTGCTTGATCTGTCTATAGAGAAGCCTGTGTGGCGTGAAATAGCAGTGACGTGGACTCCACCTTCTCGTTTGGGCCACACGCTGTCTGTTTATGGAGGCAGGAAAATTCTTATGTTTGGGGGTCTTGCCAAGAGTGGTCCTGTGCGTTTTCGATCAAGTGATGTGTTTACCTTGGATCTGAGTGAGGAAGAACCCTGCTGGAGATGTGTTACAGGAAGTGGAATGCCTGGTGCGGGAAATCCTGGAGGTCTTGCTCCTTCCCCAAGGCTTGATCATGTGGCATTAAGTCTCCCTGGTGGCAGAGTTCTGGTCTTTGGTGGGTCCATTACTTCTGGTCTCCACTCAGGATCACAGCTCTACATTTTGGATCCAACTGAAGAGAAGCCAACATGGAGGATATTGAATGTGACTGGTCGGGCTCCAAGTATTGCTTGGGGACATAATACATGTGTTGTTGGCGGAACTAGAGCAATAGTCATCGGAGGTCAAACTGGGGAAGACTGGATGCTCGGTGAGTTGCATGAACTCTCTTTAGCAAGCTCTGTTGTTGTATGAATAAAAGAAAGGTAATAATCAAGAGAAGGTGTTGTACTGAAAA-TTTTGCCTC</genome_strand>
        <mrna_strand>CAGAGTGGAAACATGTCAAAGTTAGTTCTCCTCCTCCTGGACGTTGGGGGCACACACTCTCTTGTGTGAATGGATCTCATCTTGTTGTGTTTGGTGGATATGGAAGGCAGGGTCTCTTGAATGACGTCTTTGTGCTGGATTTGGATGCCAAACAACCAACATGGCGTGAAATCTCTAGCTTGGCGCCTCCGCTTCCAAGATCTTGGCACAGCTCCTGTACTTTGGATGGGACCAAGTTGATAGTCTCTGGTGGTTGTACAGATTCTGGTGTACTTCTCAGTGATACTTTCCTGCTTGATCTGTCTATAGAGAAGCCTGTGTGGCGTGAAATAGCAGTGACGTGGACTCCACCTTCTCGTTTGGGCCACACGCTGTCTGTTTATGGAGGCAGGAAAATTCTTATGTTTGGGGGTCTTGCCAAGAGTGGTCCTGTGCGTTTTCGATCAAGTGATGTGTTTACCTTGGATCTGAGTGAGGAAGAACCCTGCTGGAGATGTGTTACAGGAAGTGGAATGCCTGGTGCGGGAAATCCTGGAGGTCTTGCTCCTTCCCCAAGGCTTGATCATGTGGCATTAAGTCTCCCTGGTGGCAGAGTTCTGGTCTTTGGTGGGTCCATTACTTCTGGTCTCCACTCAGGATCACAGCTCTACATTTTGGATCCAACTGAAGAGAAGCCAACATGGAGGATATTGAATGTGACTGGTCGGGCTCCAAGTATTGCTTGGGGACATAATACATGTGTTGTTGGCGGAACTAGAGCAATAGTCATCGGAGGTCAAACTGGGGAAGACTGGATGCTCGGTGAGTTGCATGAACTCTCTTTAGCAAGCTCTGTTGTTGTATGAATAAAAGAAAGGTAATAATCAAGAGAAAGTGTTGTACTGAAAATTTTTGCCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E545129" ref_strand="+" ref_description="SGN-E545129 [TUS-67-N3]">
      <seq>caagagtggtcctgtgcgttttcgatcaagtgatgtgtttaccttggatctgagtgaggaagaaccctgctggagatgtgttacaggaagtggaatgcctggtgcgggaaatcctggaggtcttgctccttccccaaggcttgatcatgtggcattaagtctccctggtggcagagttctggtctttggtgggtccattacttctggtctccactcaggatcacagctctacattttggatccaactgaagagaagccaacatggaggatattgaatgtgactggtcgggctccaagtattgcttggggacataatacatgtgttgttggcggaactagagcaatagtcatcggaggtcaaactggggaagactggatgctcggtgagttgcatgaactctctttagcaagctctgttgttgtatgaataaaagaaaggtaataatcaagagaaggtgttgtactgaaaattttgcctcaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="+" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="85444" stop="86525"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85744" g_stop="86225" g_length="482"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="482" r_length="482" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="+" ref_id="SGN-E545129" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>482</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E545129" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85744" e_stop="86225"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGAGTGGTCCTGTGCGTTTTCGATCAAGTGATGTGTTTACCTTGGATCTGAGTGAGGAAGAACCCTGCTGGAGATGTGTTACAGGAAGTGGAATGCCTGGTGCGGGAAATCCTGGAGGTCTTGCTCCTTCCCCAAGGCTTGATCATGTGGCATTAAGTCTCCCTGGTGGCAGAGTTCTGGTCTTTGGTGGGTCCATTACTTCTGGTCTCCACTCAGGATCACAGCTCTACATTTTGGATCCAACTGAAGAGAAGCCAACATGGAGGATATTGAATGTGACTGGTCGGGCTCCAAGTATTGCTTGGGGACATAATACATGTGTTGTTGGCGGAACTAGAGCAATAGTCATCGGAGGTCAAACTGGGGAAGACTGGATGCTCGGTGAGTTGCATGAACTCTCTTTAGCAAGCTCTGTTGTTGTATGAATAAAAGAAAGGTAATAATCAAGAGAAGGTGTTGTACTGAAAATTTTGCCTCAAG</genome_strand>
        <mrna_strand>CAAGAGTGGTCCTGTGCGTTTTCGATCAAGTGATGTGTTTACCTTGGATCTGAGTGAGGAAGAACCCTGCTGGAGATGTGTTACAGGAAGTGGAATGCCTGGTGCGGGAAATCCTGGAGGTCTTGCTCCTTCCCCAAGGCTTGATCATGTGGCATTAAGTCTCCCTGGTGGCAGAGTTCTGGTCTTTGGTGGGTCCATTACTTCTGGTCTCCACTCAGGATCACAGCTCTACATTTTGGATCCAACTGAAGAGAAGCCAACATGGAGGATATTGAATGTGACTGGTCGGGCTCCAAGTATTGCTTGGGGACATAATACATGTGTTGTTGGCGGAACTAGAGCAATAGTCATCGGAGGTCAAACTGGGGAAGACTGGATGCTCGGTGAGTTGCATGAACTCTCTTTAGCAAGCTCTGTTGTTGTATGAATAAAAGAAAGGTAATAATCAAGAGAAGGTGTTGTACTGAAAATTTTGCCTCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E309780" ref_strand="+" ref_description="SGN-E309780 [cLEY-26-P14]">
      <seq>aagagtggtcctgtgcgttttcgatcaagtgatgtgtttaccttggatctgagtgaggaagaaccctgctggagatgtgttacaggaagtggaatgcctggtgcgggaaatcctggaggtcttgctccttccccaaggcttgatcatgtggcattaagtctccctggtggcagagttctggtctttggtgggtccattacttctggtctccactcaggatcacagctctacattttggatccaactgaagagaagccaacatggaggatattgaatgtgactggtcgggctccaagtattgcttggggacataatacatgtgttgttggcggaactagagcaatagtcatcggaggtcaaactggggaagactggatgctcggtgagttgcatgaactctctttagcaagctctgttgttgtatgaataaaagaaaggtaataatcaagagaaggtgttgtactgaaaattttgcctcaagaattaaggaattcccgagcaaactattgcagtgcggttttggcattgcaccaaatgcatagttgattagcttgtttattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="+" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="85445" stop="86605"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85745" g_stop="86305" g_length="561"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="561" r_length="561" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="+" ref_id="SGN-E309780" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>561</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E309780" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85745" e_stop="86305"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAGTGGTCCTGTGCGTTTTCGATCAAGTGATGTGTTTACCTTGGATCTGAGTGAGGAAGAACCCTGCTGGAGATGTGTTACAGGAAGTGGAATGCCTGGTGCGGGAAATCCTGGAGGTCTTGCTCCTTCCCCAAGGCTTGATCATGTGGCATTAAGTCTCCCTGGTGGCAGAGTTCTGGTCTTTGGTGGGTCCATTACTTCTGGTCTCCACTCAGGATCACAGCTCTACATTTTGGATCCAACTGAAGAGAAGCCAACATGGAGGATATTGAATGTGACTGGTCGGGCTCCAAGTATTGCTTGGGGACATAATACATGTGTTGTTGGCGGAACTAGAGCAATAGTCATCGGAGGTCAAACTGGGGAAGACTGGATGCTCGGTGAGTTGCATGAACTCTCTTTAGCAAGCTCTGTTGTTGTATGAATAAAAGAAAGGTAATAATCAAGAGAAGGTGTTGTACTGAAAATTTTGCCTCAAGAATTAAGGAATTCCCGAGCAAACTATTGCAGTGCGGTTTTGGCATTGCACCAAATGCATAGTTGATTAGCTTGTTTATTC</genome_strand>
        <mrna_strand>AAGAGTGGTCCTGTGCGTTTTCGATCAAGTGATGTGTTTACCTTGGATCTGAGTGAGGAAGAACCCTGCTGGAGATGTGTTACAGGAAGTGGAATGCCTGGTGCGGGAAATCCTGGAGGTCTTGCTCCTTCCCCAAGGCTTGATCATGTGGCATTAAGTCTCCCTGGTGGCAGAGTTCTGGTCTTTGGTGGGTCCATTACTTCTGGTCTCCACTCAGGATCACAGCTCTACATTTTGGATCCAACTGAAGAGAAGCCAACATGGAGGATATTGAATGTGACTGGTCGGGCTCCAAGTATTGCTTGGGGACATAATACATGTGTTGTTGGCGGAACTAGAGCAATAGTCATCGGAGGTCAAACTGGGGAAGACTGGATGCTCGGTGAGTTGCATGAACTCTCTTTAGCAAGCTCTGTTGTTGTATGAATAAAAGAAAGGTAATAATCAAGAGAAGGTGTTGTACTGAAAATTTTGCCTCAAGAATTAAGGAATTCCCGAGCAAACTATTGCAGTGCGGTTTTGGCATTGCACCAAATGCATAGTTGATTAGCTTGTTTATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E549156" ref_strand="-" ref_description="SGN-E549156 [TUS-67-N3]">
      <seq>ataatacatgtgttgttggcggaactagagcaatagtcatcggaggtcaaactggggaagactggatgctcggtgagttgcatgaactctctttagcaagctctgttgttgtatgaataaaagaaaggtaataatcaagagaaggtgttgtactgaaaattttgcctcaagaattaaggaattcccgagcaaactattgcagtgcggttttggcattgcaccaaatgcatagttgattagcttgtttattcttgtatggtcctgttgagagcttaattttgcaaggtttgcatggaatgatttcgcttgatgcacttgaatattcacccacctaggtgtagagcttgatagatgagtaggttattattattattattattattatgtattcttaggttagtttgtatcgtgtatggatatgtgtgttgttcaagccctgtaatttgaacccctttgggagaatgaatatgtaaaaatagaaaaagtaaaggaaaaaaaggtaatgattgcagtaaaagaaaaaaaaaaaaactcgaggggggcccgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="+" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="85755" stop="86877"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86055" g_stop="86553" g_length="499"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="499" r_length="499" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="514" polyA_stop="531"/>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="+" ref_id="SGN-E549156" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>499</cumulative_length_of_scored_exons>
        <coverage percentage="0.912" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E549156" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="86055" e_stop="86553"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAATACATGTGTTGTTGGCGGAACTAGAGCAATAGTCATCGGAGGTCAAACTGGGGAAGACTGGATGCTCGGTGAGTTGCATGAACTCTCTTTAGCAAGCTCTGTTGTTGTATGAATAAAAGAAAGGTAATAATCAAGAGAAGGTGTTGTACTGAAAATTTTGCCTCAAGAATTAAGGAATTCCCGAGCAAACTATTGCAGTGCGGTTTTGGCATTGCACCAAATGCATAGTTGATTAGCTTGTTTATTCTTGTATGGTCCTGTTGAGAGCTTAATTTTGCAAGGTTTGCATGGAATGATTTCGCTTGATGCACTTGAATATTCACCCACCTAGGTGTAGAGCTTGATAGATGAGTAGGTTATTATTATTATTATTATTATTATGTATTCTTAGGTTAGTTTGTATCGTGTATGGATATGTGTGTTGTTCAAGCCCTGTAATTTGAACCCCTTTGGGAGAATGAATATGTAAAAATAGAAAAAGTAAAGGAAAAAAAG</genome_strand>
        <mrna_strand>ATAATACATGTGTTGTTGGCGGAACTAGAGCAATAGTCATCGGAGGTCAAACTGGGGAAGACTGGATGCTCGGTGAGTTGCATGAACTCTCTTTAGCAAGCTCTGTTGTTGTATGAATAAAAGAAAGGTAATAATCAAGAGAAGGTGTTGTACTGAAAATTTTGCCTCAAGAATTAAGGAATTCCCGAGCAAACTATTGCAGTGCGGTTTTGGCATTGCACCAAATGCATAGTTGATTAGCTTGTTTATTCTTGTATGGTCCTGTTGAGAGCTTAATTTTGCAAGGTTTGCATGGAATGATTTCGCTTGATGCACTTGAATATTCACCCACCTAGGTGTAGAGCTTGATAGATGAGTAGGTTATTATTATTATTATTATTATTATGTATTCTTAGGTTAGTTTGTATCGTGTATGGATATGTGTGTTGTTCAAGCCCTGTAATTTGAACCCCTTTGGGAGAATGAATATGTAAAAATAGAAAAAGTAAAGGAAAAAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E267705" ref_strand="-" ref_description="SGN-E267705 [cLEI-12-I22]">
      <seq>ggtaaatgaattgatcagttatatgatccagcacaagtgcagaccaaatgagctaacatacaagactattgttgatggttattgtaaagcaaaaagataccaagatgcaatggattttgtgttgaatattaaagaaaaagataacacctttgatgaggaatctttgcaacgatttgcttctcgagttagggaaaatatggaatcatgacttagtaattccatgggatgtccactctttgataaactgacgtccaagttgactaggagagagagacgaagttcctcgacttgttattttgcttctatgaaattgtagattccattcacatccttagttttaacttgctttgaagagacttcacactgcgcgatgaacaaaagaacaacattttgactgttccttaatgggaccggctttgtgtatctgagttactgcactacaccaagttcttagtacttttggactttgcaagatgagtttataaattcagaaaatgaatgttacaggttccttttgtattattagtagtttgatattaatatataagtttcatttcattgctaaaaaaaaaaaaaaaaaaaaaaaaactcgaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="-" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="90543" stop="89372"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90243" g_stop="89680" g_length="564"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="564" r_length="564" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="565" polyA_stop="589"/>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="-" ref_id="SGN-E267705" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>564</cumulative_length_of_scored_exons>
        <coverage percentage="0.948" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E267705" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="90243" e_stop="89680"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTAAATGAATTGATCAGTTATATGATCCAGCACAAGTGCAGACCAAATGAGCTAACATACAAGACTATTGTTGATGGTTATTGTAAAGCAAAAAGATACCAAGATGCAATGGATTTTGTGTTGAATATTAAAGAAAAAGATAACACCTTTGATGAGGAATCTTTGCAACGATTTGCTTCTCGAGTTAGGGAAAATATGGAATCATGACTTAGTAATTCCATGGGATGTCCACTCTTTGATAAACTGACGTCCAAGTTGACTAGGAGAGAGAGACGAAGTTCCTCGACTTGTTATTTTGCTTCTATGAAATTGTAGATTCCATTCACATCCTTAGTTTTAACTTGCTTTGAAGAGACTTCACACTGCGCGATGAACAAAAGAACAACATTTTGACTGTTCCTTAATGGGACCGGCTTTGTGTATCTGAGTTACTGCACTACACCAAGTTCTTAGTACTTTTGGACTTTGCAAGATGAGTTTATAAATTCAGAAAATGAATGTTACAGGTTCCTTTTGTATTATTAGTAGTTTGATATTAATATATAAGTTTCATTTCATTGCTC</genome_strand>
        <mrna_strand>GGTAAATGAATTGATCAGTTATATGATCCAGCACAAGTGCAGACCAAATGAGCTAACATACAAGACTATTGTTGATGGTTATTGTAAAGCAAAAAGATACCAAGATGCAATGGATTTTGTGTTGAATATTAAAGAAAAAGATAACACCTTTGATGAGGAATCTTTGCAACGATTTGCTTCTCGAGTTAGGGAAAATATGGAATCATGACTTAGTAATTCCATGGGATGTCCACTCTTTGATAAACTGACGTCCAAGTTGACTAGGAGAGAGAGACGAAGTTCCTCGACTTGTTATTTTGCTTCTATGAAATTGTAGATTCCATTCACATCCTTAGTTTTAACTTGCTTTGAAGAGACTTCACACTGCGCGATGAACAAAAGAACAACATTTTGACTGTTCCTTAATGGGACCGGCTTTGTGTATCTGAGTTACTGCACTACACCAAGTTCTTAGTACTTTTGGACTTTGCAAGATGAGTTTATAAATTCAGAAAATGAATGTTACAGGTTCCTTTTGTATTATTAGTAGTTTGATATTAATATATAAGTTTCATTTCATTGCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E350196" ref_strand="+" ref_description="SGN-E350196 [cTOS-4-I20]">
      <seq>aagaatggaggaaagccagaccttgtatcatataacactgtcatcaaagcgttctgcagacaaggtcgtatggaggaggccatacgagttttctcccagatgacagaaaaaggaatccgaccttgcattgttacatataatacatttatggctggatttgcagctcgaggaatgttctctgaggtaaatgaattgatcagttatatgatccagcacaagtgcagaccaaatgagctaacatacaagactattgttgatggttattgtaaagcaaaaagataccaagatgcaatggattttgtgttgaatattaaagaaaaagataacacctttgatgaggaatctttgcaacgatttgcttctcgagttagggaaaatatggaatcatgacttagtaattccatgggatgtccactctttgataaactgacgtccaagttgactaggagagagagacgaagttcctcgacttgttattttgcttctatgaaattgtagattccattcacatccttagttttaacttgctttgaagagacttcacactgcgcgatgaacaaaagaacaacattttgactgttccttaatgggaccggctttgtgtatctgagttactgcactacaccaagttcttagtacttttggactttgcaagatgagtttataaattcagaaaatgaatgttacagggttccttttgtattattagtagtttgatattaatatataagtttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="-" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="90725" stop="89391"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90425" g_stop="89691" g_length="735"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="736" r_length="736" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="-" ref_id="SGN-E350196" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>735</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E350196" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90425" e_stop="89691"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAATGGAGGAAAGCCAGACCTTGTATCATATAACACTGTCATCAAAGCGTTCTGCAGACAAGGTCGTATGGAGGAGGCCATACGAGTTTTCTCCCAGATGACAGAAAAAGGAATCCGACCTTGCATTGTTACATATAATACATTTATGGCTGGATTTGCAGCTCGAGGAATGTTCTCTGAGGTAAATGAATTGATCAGTTATATGATCCAGCACAAGTGCAGACCAAATGAGCTAACATACAAGACTATTGTTGATGGTTATTGTAAAGCAAAAAGATACCAAGATGCAATGGATTTTGTGTTGAATATTAAAGAAAAAGATAACACCTTTGATGAGGAATCTTTGCAACGATTTGCTTCTCGAGTTAGGGAAAATATGGAATCATGACTTAGTAATTCCATGGGATGTCCACTCTTTGATAAACTGACGTCCAAGTTGACTAGGAGAGAGAGACGAAGTTCCTCGACTTGTTATTTTGCTTCTATGAAATTGTAGATTCCATTCACATCCTTAGTTTTAACTTGCTTTGAAGAGACTTCACACTGCGCGATGAACAAAAGAACAACATTTTGACTGTTCCTTAATGGGACCGGCTTTGTGTATCTGAGTTACTGCACTACACCAAGTTCTTAGTACTTTTGGACTTTGCAAGATGAGTTTATAAATTCAGAAAATGAATGTTACA-GGTTCCTTTTGTATTATTAGTAGTTTGATATTAATATATAAGTTTCA</genome_strand>
        <mrna_strand>AAGAATGGAGGAAAGCCAGACCTTGTATCATATAACACTGTCATCAAAGCGTTCTGCAGACAAGGTCGTATGGAGGAGGCCATACGAGTTTTCTCCCAGATGACAGAAAAAGGAATCCGACCTTGCATTGTTACATATAATACATTTATGGCTGGATTTGCAGCTCGAGGAATGTTCTCTGAGGTAAATGAATTGATCAGTTATATGATCCAGCACAAGTGCAGACCAAATGAGCTAACATACAAGACTATTGTTGATGGTTATTGTAAAGCAAAAAGATACCAAGATGCAATGGATTTTGTGTTGAATATTAAAGAAAAAGATAACACCTTTGATGAGGAATCTTTGCAACGATTTGCTTCTCGAGTTAGGGAAAATATGGAATCATGACTTAGTAATTCCATGGGATGTCCACTCTTTGATAAACTGACGTCCAAGTTGACTAGGAGAGAGAGACGAAGTTCCTCGACTTGTTATTTTGCTTCTATGAAATTGTAGATTCCATTCACATCCTTAGTTTTAACTTGCTTTGAAGAGACTTCACACTGCGCGATGAACAAAAGAACAACATTTTGACTGTTCCTTAATGGGACCGGCTTTGTGTATCTGAGTTACTGCACTACACCAAGTTCTTAGTACTTTTGGACTTTGCAAGATGAGTTTATAAATTCAGAAAATGAATGTTACAGGGTTCCTTTTGTATTATTAGTAGTTTGATATTAATATATAAGTTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E345141" ref_strand="+" ref_description="SGN-E345141 [cTOF-22-F2]">
      <seq>tggatacaggccagatttggtcatatttaactccatgctttccatatttgcaaggaacaagctatatgaccgtgctcatgaggtgctgcatttaattagggagaatggtctgcagccagatcttgttacatataatagtttaatggatatgtatgctagagccggtgaatgttggaaagctgaggaaatccttaatcgactgcagaagaatggaggaaagccagaccttgtatcatataacactgtcatcaaagcgttctgcagacaaggtcgtatggaggaggccatacgagttttctcccagatgacagaaaaaggaatccgaccttgcattgttacatataatacatttatggctggatttgcagctcgaggaatgttctctgaggtaaatgaattgatcagttatatgatccagcacaagtgcagaccaaatgagctaacatacaagactattgttgatggttattgtaaagcaaaaagataccaagatgcaatggattttgtgttgaatattaaagaaaaagataacacctttgatgaggaatctttgcaacgatttgcttctcgagttagggaaaatatggaatcatgacttagtaattccatgggatgtccactctttgataaactgacgtccaagttgactaggagagagagacgaagttcctcgacttgttattttgcttctatgaaaatgtagattccattcacatncttagttttaacttgctttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="-" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="90930" stop="89594"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90630" g_stop="89894" g_length="737"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="737" r_length="737" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="-" ref_id="SGN-E345141" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>737</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E345141" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90630" e_stop="89894"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGATACAGGCCAGATTTGGTCATATTTAACTCCATGCTTTCCATATTTGCAAGGAACAAGCTATATGACCGTGCTCATGAGGTGCTGCATTTAATTAGGGAGAATGGTCTGCAGCCAGATCTTGTTACATATAATAGTTTAATGGATATGTATGCTAGAGCCGGTGAATGTTGGAAAGCTGAGGAAATCCTTAATCGACTGCAGAAGAATGGAGGAAAGCCAGACCTTGTATCATATAACACTGTCATCAAAGCGTTCTGCAGACAAGGTCGTATGGAGGAGGCCATACGAGTTTTCTCCCAGATGACAGAAAAAGGAATCCGACCTTGCATTGTTACATATAATACATTTATGGCTGGATTTGCAGCTCGAGGAATGTTCTCTGAGGTAAATGAATTGATCAGTTATATGATCCAGCACAAGTGCAGACCAAATGAGCTAACATACAAGACTATTGTTGATGGTTATTGTAAAGCAAAAAGATACCAAGATGCAATGGATTTTGTGTTGAATATTAAAGAAAAAGATAACACCTTTGATGAGGAATCTTTGCAACGATTTGCTTCTCGAGTTAGGGAAAATATGGAATCATGACTTAGTAATTCCATGGGATGTCCACTCTTTGATAAACTGACGTCCAAGTTGACTAGGAGAGAGAGACGAAGTTCCTCGACTTGTTATTTTGCTTCTATGAAATTGTAGATTCCATTCACATCCTTAGTTTTAACTTGCTTTG</genome_strand>
        <mrna_strand>TGGATACAGGCCAGATTTGGTCATATTTAACTCCATGCTTTCCATATTTGCAAGGAACAAGCTATATGACCGTGCTCATGAGGTGCTGCATTTAATTAGGGAGAATGGTCTGCAGCCAGATCTTGTTACATATAATAGTTTAATGGATATGTATGCTAGAGCCGGTGAATGTTGGAAAGCTGAGGAAATCCTTAATCGACTGCAGAAGAATGGAGGAAAGCCAGACCTTGTATCATATAACACTGTCATCAAAGCGTTCTGCAGACAAGGTCGTATGGAGGAGGCCATACGAGTTTTCTCCCAGATGACAGAAAAAGGAATCCGACCTTGCATTGTTACATATAATACATTTATGGCTGGATTTGCAGCTCGAGGAATGTTCTCTGAGGTAAATGAATTGATCAGTTATATGATCCAGCACAAGTGCAGACCAAATGAGCTAACATACAAGACTATTGTTGATGGTTATTGTAAAGCAAAAAGATACCAAGATGCAATGGATTTTGTGTTGAATATTAAAGAAAAAGATAACACCTTTGATGAGGAATCTTTGCAACGATTTGCTTCTCGAGTTAGGGAAAATATGGAATCATGACTTAGTAATTCCATGGGATGTCCACTCTTTGATAAACTGACGTCCAAGTTGACTAGGAGAGAGAGACGAAGTTCCTCGACTTGTTATTTTGCTTCTATGAAAATGTAGATTCCATTCACATNCTTAGTTTTAACTTGCTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E735850" ref_strand="+" ref_description="SGN-E735850 [LC03BE08]">
      <seq>cggtagctgaatctgttttctcagacatgaaaagtaagggctttaagcccagtgaaactacttactctttgatgctccactgctattccaagggagggaacgtgagaggtgtggagagaatcgcaaaggaaatttatgatggtcatatttttcctagttggatgcttttgagaaccctcattcttgcaaatttcaagtgtagatctctcatgggtatggagagagcatttcaggaactacagaaaaatggatacaggccagatttggtcatatttaactccatgctttccatatttgcaaggaacaagctatatgaccgtgctcatgaggtgctgcatttaattagggagaatggtctgcagccagatcttgttacatataatagtttaatggatatgtatgctagagccggtgaatgttggaaagctgaggaaatccttaatcgactgcagaagaatggaggaaagccagaccttgtatcatataacactgtcatcaaagcgttctgcagacaaggtcgtatggaggaggccatacgagttttctcccagatgacagaaaaaggaatccgaccttgcattgttacatataatacatttatggctggatttgcagctcgaggaatgttctctgaggtaaatgaattgatcagttatatgatccagcacaagtgcagaccaaatgagctaacatacaagactattgttgatggttattgtaaagcaaaaagataccaagatgcaatggattttgtgttgaatattaaagaaaaagataacacctttgatgaggaatcttttgcacgatttgctttctcgagtangggaaatatggaatcatgacttantattcccatgggatgtccactctttgataaactgacgtccagttgacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="-" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="91175" stop="89681"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90877" g_stop="89981" g_length="897"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="896" r_length="896" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="-" ref_id="SGN-E735850" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>897</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E735850" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90877" e_stop="89981"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGCAGCTGAATCTGTTTTCTCAGACATGAAAAGTAAGGGCTTTAAGCCCAGTGAAACTACTTACTCTTTGATGCTCCACTGCTATTCCAAGGGAGGGAACGTGAGAGGTGTGGAGAGAATCGCAAAGGAAATTTATGATGGTCATATTTTTCCTAGTTGGATGCTTTTGAGAACCCTCATTCTTGCAAATTTCAAGTGTAGATCTCTCATGGGTATGGAGAGAGCATTTCAGGAACTACAGAAAAATGGATACAGGCCAGATTTGGTCATATTTAACTCCATGCTTTCCATATTTGCAAGGAACAAGCTATATGACCGTGCTCATGAGGTGCTGCATTTAATTAGGGAGAATGGTCTGCAGCCAGATCTTGTTACATATAATAGTTTAATGGATATGTATGCTAGAGCCGGTGAATGTTGGAAAGCTGAGGAAATCCTTAATCGACTGCAGAAGAATGGAGGAAAGCCAGACCTTGTATCATATAACACTGTCATCAAAGCGTTCTGCAGACAAGGTCGTATGGAGGAGGCCATACGAGTTTTCTCCCAGATGACAGAAAAAGGAATCCGACCTTGCATTGTTACATATAATACATTTATGGCTGGATTTGCAGCTCGAGGAATGTTCTCTGAGGTAAATGAATTGATCAGTTATATGATCCAGCACAAGTGCAGACCAAATGAGCTAACATACAAGACTATTGTTGATGGTTATTGTAAAGCAAAAAGATACCAAGATGCAATGGATTTTGTGTTGAATATTAAAGAAAAAGATAACACCTTTGATGAGGAATCTTTGCAACGATTTGC-TTCTCGAGTTAGGGAAAATATGGAATCATGACTTAGTAATTCCATGGGATGTCCACTCTTTGATAAACTGACGTCCAAGTTGACTA</genome_strand>
        <mrna_strand>CGGTAGCTGAATCTGTTTTCTCAGACATGAAAAGTAAGGGCTTTAAGCCCAGTGAAACTACTTACTCTTTGATGCTCCACTGCTATTCCAAGGGAGGGAACGTGAGAGGTGTGGAGAGAATCGCAAAGGAAATTTATGATGGTCATATTTTTCCTAGTTGGATGCTTTTGAGAACCCTCATTCTTGCAAATTTCAAGTGTAGATCTCTCATGGGTATGGAGAGAGCATTTCAGGAACTACAGAAAAATGGATACAGGCCAGATTTGGTCATATTTAACTCCATGCTTTCCATATTTGCAAGGAACAAGCTATATGACCGTGCTCATGAGGTGCTGCATTTAATTAGGGAGAATGGTCTGCAGCCAGATCTTGTTACATATAATAGTTTAATGGATATGTATGCTAGAGCCGGTGAATGTTGGAAAGCTGAGGAAATCCTTAATCGACTGCAGAAGAATGGAGGAAAGCCAGACCTTGTATCATATAACACTGTCATCAAAGCGTTCTGCAGACAAGGTCGTATGGAGGAGGCCATACGAGTTTTCTCCCAGATGACAGAAAAAGGAATCCGACCTTGCATTGTTACATATAATACATTTATGGCTGGATTTGCAGCTCGAGGAATGTTCTCTGAGGTAAATGAATTGATCAGTTATATGATCCAGCACAAGTGCAGACCAAATGAGCTAACATACAAGACTATTGTTGATGGTTATTGTAAAGCAAAAAGATACCAAGATGCAATGGATTTTGTGTTGAATATTAAAGAAAAAGATAACACCTTTGATGAGGAATCTTTTGCACGATTTGCTTTCTCGAG-TANGGGAAATATGGAATCATGACTTANTATTCCCATGGGATGTCCACTCTTTGATAAACTGACGTCC-AGTTGACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E276938" ref_strand="+" ref_description="SGN-E276938 [cLEN-22-I22]">
      <seq>cagatttggtcatatttaactccatgctttccatatttgcaaggaacaagctatatgaccgtgctcatgaggtgctgcatttaattagggagaatggtctgcagccagatcttgttacatataatagtttaatggatatgtatgctagagccggtgaatgttggaaagctgaggaaatccttaatcgactgcagaagaatggaggaaagccagaccttgtatcatataacactgtcatcaaagcgttctgcagacaaggtcgtatggaggaggccatacgagttttctcccagatgacagaaaaaggaatccgaccttgcattgttacatataatacatttatggctggatttgcagctcgaggaatgttctctgaggtaaatgaattgatcagttatatgatccagcacaagtgcagaccaaatgagctaacatacaagactattgttgatggttattgtaaagcaaaaagataccaagatgcaatggattttgtgttgaatattaaagaaaaagataacacctttgatgaggaatctttgcaacgatttgcttctcgagttagggaaaatatggaatcatgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="-" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="90919" stop="89735"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90619" g_stop="90035" g_length="585"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="585" r_length="585" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="-" ref_id="SGN-E276938" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>585</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E276938" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90619" e_stop="90035"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGATTTGGTCATATTTAACTCCATGCTTTCCATATTTGCAAGGAACAAGCTATATGACCGTGCTCATGAGGTGCTGCATTTAATTAGGGAGAATGGTCTGCAGCCAGATCTTGTTACATATAATAGTTTAATGGATATGTATGCTAGAGCCGGTGAATGTTGGAAAGCTGAGGAAATCCTTAATCGACTGCAGAAGAATGGAGGAAAGCCAGACCTTGTATCATATAACACTGTCATCAAAGCGTTCTGCAGACAAGGTCGTATGGAGGAGGCCATACGAGTTTTCTCCCAGATGACAGAAAAAGGAATCCGACCTTGCATTGTTACATATAATACATTTATGGCTGGATTTGCAGCTCGAGGAATGTTCTCTGAGGTAAATGAATTGATCAGTTATATGATCCAGCACAAGTGCAGACCAAATGAGCTAACATACAAGACTATTGTTGATGGTTATTGTAAAGCAAAAAGATACCAAGATGCAATGGATTTTGTGTTGAATATTAAAGAAAAAGATAACACCTTTGATGAGGAATCTTTGCAACGATTTGCTTCTCGAGTTAGGGAAAATATGGAATCATGAC</genome_strand>
        <mrna_strand>CAGATTTGGTCATATTTAACTCCATGCTTTCCATATTTGCAAGGAACAAGCTATATGACCGTGCTCATGAGGTGCTGCATTTAATTAGGGAGAATGGTCTGCAGCCAGATCTTGTTACATATAATAGTTTAATGGATATGTATGCTAGAGCCGGTGAATGTTGGAAAGCTGAGGAAATCCTTAATCGACTGCAGAAGAATGGAGGAAAGCCAGACCTTGTATCATATAACACTGTCATCAAAGCGTTCTGCAGACAAGGTCGTATGGAGGAGGCCATACGAGTTTTCTCCCAGATGACAGAAAAAGGAATCCGACCTTGCATTGTTACATATAATACATTTATGGCTGGATTTGCAGCTCGAGGAATGTTCTCTGAGGTAAATGAATTGATCAGTTATATGATCCAGCACAAGTGCAGACCAAATGAGCTAACATACAAGACTATTGTTGATGGTTATTGTAAAGCAAAAAGATACCAAGATGCAATGGATTTTGTGTTGAATATTAAAGAAAAAGATAACACCTTTGATGAGGAATCTTTGCAACGATTTGCTTCTCGAGTTAGGGAAAATATGGAATCATGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E274472" ref_strand="+" ref_description="SGN-E274472 [cLEN-11-C11]">
      <seq>agatttggtcatatttaactccatgctttccatatttgctcggaacaagctatatgaccgtgctcatgaggtgctgcatttaattagggagaatggtctgcagccagatcttgttacatataatagtttaatggatatgtatgctagagccggtgaatgttggaaagctgaggaaatccttaatcgactgcagaagaatggaggaaagccagaccttgtatcatataacactgtcatcaaagcgttctgcagacaaggtcgtatggaggaggccatacgagttttctcccagatgacagaaaaaggaatccgaccttgcattgttacatataatacatttatggctggatttgcagctcgaggaatgttctctgaggtaaatgaattgatcagttatatgatccagcacaagtgcagaccaaatgagctaacatacaagactattgttgatggttattgcaaagcaaaaagataccaagatgcaatggattttgtgttgaatattaaagaaaaagataacacctttgatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="-" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="90918" stop="89788"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90618" g_stop="90088" g_length="531"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="531" r_length="531" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="-" ref_id="SGN-E274472" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>531</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E274472" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90618" e_stop="90088"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATTTGGTCATATTTAACTCCATGCTTTCCATATTTGCAAGGAACAAGCTATATGACCGTGCTCATGAGGTGCTGCATTTAATTAGGGAGAATGGTCTGCAGCCAGATCTTGTTACATATAATAGTTTAATGGATATGTATGCTAGAGCCGGTGAATGTTGGAAAGCTGAGGAAATCCTTAATCGACTGCAGAAGAATGGAGGAAAGCCAGACCTTGTATCATATAACACTGTCATCAAAGCGTTCTGCAGACAAGGTCGTATGGAGGAGGCCATACGAGTTTTCTCCCAGATGACAGAAAAAGGAATCCGACCTTGCATTGTTACATATAATACATTTATGGCTGGATTTGCAGCTCGAGGAATGTTCTCTGAGGTAAATGAATTGATCAGTTATATGATCCAGCACAAGTGCAGACCAAATGAGCTAACATACAAGACTATTGTTGATGGTTATTGTAAAGCAAAAAGATACCAAGATGCAATGGATTTTGTGTTGAATATTAAAGAAAAAGATAACACCTTTGATGA</genome_strand>
        <mrna_strand>AGATTTGGTCATATTTAACTCCATGCTTTCCATATTTGCTCGGAACAAGCTATATGACCGTGCTCATGAGGTGCTGCATTTAATTAGGGAGAATGGTCTGCAGCCAGATCTTGTTACATATAATAGTTTAATGGATATGTATGCTAGAGCCGGTGAATGTTGGAAAGCTGAGGAAATCCTTAATCGACTGCAGAAGAATGGAGGAAAGCCAGACCTTGTATCATATAACACTGTCATCAAAGCGTTCTGCAGACAAGGTCGTATGGAGGAGGCCATACGAGTTTTCTCCCAGATGACAGAAAAAGGAATCCGACCTTGCATTGTTACATATAATACATTTATGGCTGGATTTGCAGCTCGAGGAATGTTCTCTGAGGTAAATGAATTGATCAGTTATATGATCCAGCACAAGTGCAGACCAAATGAGCTAACATACAAGACTATTGTTGATGGTTATTGCAAAGCAAAAAGATACCAAGATGCAATGGATTTTGTGTTGAATATTAAAGAAAAAGATAACACCTTTGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E408661" ref_strand="+" ref_description="SGN-E408661 [PPI-11-F18]">
      <seq>tcttaatgcccttgctcgtcgaggtgattggagagcagctgaatctgttttctcagacatgaaaagtaagggctttaagcccagtgaaactacttactctttgatgctccactgctattccaagggagggaacgtgagaggtgtggagagaatcgcaaaggaaatttatgatggtcatatttttcctagttggatgcttttgagaaccctcattcttgcaaatttcaagtgtagatctctcatgggtatggagagagcatttcaggaattacagaaaaatggatacaggccagatttggtcatatttaactccatgctttccatatttgcaaggaacaagctatatgaccgtgctcacgaggtgctgcatttaattagggagaatggtcagcagccagatcttgttacatataatagtttaatggacatgtatgctagagccggtgaatgttggaaagctgaggaaatccttaatcgactgcagaagaatggaggaaatccagaccttgtatcatataacactgtcatcaaagcgttctgcagacaaggtcgtatggaggacgccatacgaattttctcccagatgacagaaaaaggaatccgaccttgcattgttacatataatacatttatcgctggatttgcagctcgaggaatgttctctgaggtaaatgaattgatcagttatatgatccagcacgagtgcagaccaaatgagctaacataca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="-" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="91209" stop="89882"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90909" g_stop="90182" g_length="728"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="728" r_length="728" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="-" ref_id="SGN-E408661" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>728</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E408661" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90909" e_stop="90182"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTAATGCCCTTGCTCGTCGAGGTGATTGGAGAGCAGCTGAATCTGTTTTCTCAGACATGAAAAGTAAGGGCTTTAAGCCCAGTGAAACTACTTACTCTTTGATGCTCCACTGCTATTCCAAGGGAGGGAACGTGAGAGGTGTGGAGAGAATCGCAAAGGAAATTTATGATGGTCATATTTTTCCTAGTTGGATGCTTTTGAGAACCCTCATTCTTGCAAATTTCAAGTGTAGATCTCTCATGGGTATGGAGAGAGCATTTCAGGAACTACAGAAAAATGGATACAGGCCAGATTTGGTCATATTTAACTCCATGCTTTCCATATTTGCAAGGAACAAGCTATATGACCGTGCTCATGAGGTGCTGCATTTAATTAGGGAGAATGGTCTGCAGCCAGATCTTGTTACATATAATAGTTTAATGGATATGTATGCTAGAGCCGGTGAATGTTGGAAAGCTGAGGAAATCCTTAATCGACTGCAGAAGAATGGAGGAAAGCCAGACCTTGTATCATATAACACTGTCATCAAAGCGTTCTGCAGACAAGGTCGTATGGAGGAGGCCATACGAGTTTTCTCCCAGATGACAGAAAAAGGAATCCGACCTTGCATTGTTACATATAATACATTTATGGCTGGATTTGCAGCTCGAGGAATGTTCTCTGAGGTAAATGAATTGATCAGTTATATGATCCAGCACAAGTGCAGACCAAATGAGCTAACATACA</genome_strand>
        <mrna_strand>TCTTAATGCCCTTGCTCGTCGAGGTGATTGGAGAGCAGCTGAATCTGTTTTCTCAGACATGAAAAGTAAGGGCTTTAAGCCCAGTGAAACTACTTACTCTTTGATGCTCCACTGCTATTCCAAGGGAGGGAACGTGAGAGGTGTGGAGAGAATCGCAAAGGAAATTTATGATGGTCATATTTTTCCTAGTTGGATGCTTTTGAGAACCCTCATTCTTGCAAATTTCAAGTGTAGATCTCTCATGGGTATGGAGAGAGCATTTCAGGAATTACAGAAAAATGGATACAGGCCAGATTTGGTCATATTTAACTCCATGCTTTCCATATTTGCAAGGAACAAGCTATATGACCGTGCTCACGAGGTGCTGCATTTAATTAGGGAGAATGGTCAGCAGCCAGATCTTGTTACATATAATAGTTTAATGGACATGTATGCTAGAGCCGGTGAATGTTGGAAAGCTGAGGAAATCCTTAATCGACTGCAGAAGAATGGAGGAAATCCAGACCTTGTATCATATAACACTGTCATCAAAGCGTTCTGCAGACAAGGTCGTATGGAGGACGCCATACGAATTTTCTCCCAGATGACAGAAAAAGGAATCCGACCTTGCATTGTTACATATAATACATTTATCGCTGGATTTGCAGCTCGAGGAATGTTCTCTGAGGTAAATGAATTGATCAGTTATATGATCCAGCACGAGTGCAGACCAAATGAGCTAACATACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E448877" ref_strand="+" ref_description="SGN-E448877 [cSTS-4-P19]">
      <seq>gtcacaacatacaatgcgcttcttaatgcccttgctcgtcgaggtgattggagagcagctgaatctgttttctcagacatgaaaagtaaggggtttaagcccagtgaaactacttactctttgatgctccactgctattccaagggagggaacgtgagaggtgtggagagaatcgcaaaggaaatttatgatggtcatatttttcctagttggatgcttttgagaaccctcattcttgcaaatttcaagtgtagatctctcatgggtatggagagagcatttcaggaattacagaaaaatggatacaggccagatttggtcatatttaactccatgctttccatatttgcaaggaacaagctatatgaccgtgctcacgaggtgctgcatttaattagggagaatggtctgcagccagatcttgttacatataatagtttaatggacatgtatgctagagccggtgaatgttggaaagctgangaaatccttaatcgactgcagaagaatggaggaaatccagaccttgtatcatataacactgtcatcaaagcgttctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="-" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="91229" stop="90070"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90929" g_stop="90370" g_length="560"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="560" r_length="560" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="-" ref_id="SGN-E448877" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>560</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E448877" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90929" e_stop="90370"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCACAACATACAATGCGCTTCTTAATGCCCTTGCTCGTCGAGGTGATTGGAGAGCAGCTGAATCTGTTTTCTCAGACATGAAAAGTAAGGGCTTTAAGCCCAGTGAAACTACTTACTCTTTGATGCTCCACTGCTATTCCAAGGGAGGGAACGTGAGAGGTGTGGAGAGAATCGCAAAGGAAATTTATGATGGTCATATTTTTCCTAGTTGGATGCTTTTGAGAACCCTCATTCTTGCAAATTTCAAGTGTAGATCTCTCATGGGTATGGAGAGAGCATTTCAGGAACTACAGAAAAATGGATACAGGCCAGATTTGGTCATATTTAACTCCATGCTTTCCATATTTGCAAGGAACAAGCTATATGACCGTGCTCATGAGGTGCTGCATTTAATTAGGGAGAATGGTCTGCAGCCAGATCTTGTTACATATAATAGTTTAATGGATATGTATGCTAGAGCCGGTGAATGTTGGAAAGCTGAGGAAATCCTTAATCGACTGCAGAAGAATGGAGGAAAGCCAGACCTTGTATCATATAACACTGTCATCAAAGCGTTCTG</genome_strand>
        <mrna_strand>GTCACAACATACAATGCGCTTCTTAATGCCCTTGCTCGTCGAGGTGATTGGAGAGCAGCTGAATCTGTTTTCTCAGACATGAAAAGTAAGGGGTTTAAGCCCAGTGAAACTACTTACTCTTTGATGCTCCACTGCTATTCCAAGGGAGGGAACGTGAGAGGTGTGGAGAGAATCGCAAAGGAAATTTATGATGGTCATATTTTTCCTAGTTGGATGCTTTTGAGAACCCTCATTCTTGCAAATTTCAAGTGTAGATCTCTCATGGGTATGGAGAGAGCATTTCAGGAATTACAGAAAAATGGATACAGGCCAGATTTGGTCATATTTAACTCCATGCTTTCCATATTTGCAAGGAACAAGCTATATGACCGTGCTCACGAGGTGCTGCATTTAATTAGGGAGAATGGTCTGCAGCCAGATCTTGTTACATATAATAGTTTAATGGACATGTATGCTAGAGCCGGTGAATGTTGGAAAGCTGANGAAATCCTTAATCGACTGCAGAAGAATGGAGGAAATCCAGACCTTGTATCATATAACACTGTCATCAAAGCGTTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E258683" ref_strand="+" ref_description="SGN-E258683 [cLEG-50-H9]">
      <seq>caatgtgtggtaataggggaatgcaaaaatatgtaaatcacgttttccatgagatgaaaagctgtggttttgagcctgatagagacacatttaatactttgattcgtgcttatggaaggtgtgattctgattttaatgctgcaaagatgtacgatgagatgatccaatcaggattcactccgtgtgtcacaacatacaatgcgcttcttaatgcccttgctcgtcgaggtgattggagagcagctgaatctgttttctcagacatgaaaagtaagggctttaagcccagtgaaactacttactctttgatgctccactgctattccaagggagggaacgtgagaagtgtggagagaatcgcaaaggaaatttatgatggtcctatttttcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="-" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="91414" stop="90423"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91114" g_stop="90723" g_length="392"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="392" r_length="392" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="-" ref_id="SGN-E258683" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>392</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E258683" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91114" e_stop="90723"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATGTGTGGTAATAGGGGAATGCAAAAATATGTAAATCACGTTTTCCATGAGATGAAAAGCTGTGGTTTTGAGCCTGATAGAGACACATTTAATACTTTGATTCGTGCTTATGGAAGGTGTGATTCTGATTTTAATGCTGCAAAGATGTACGATGAGATGATCCAATCAGGATTCACTCCGTGTGTCACAACATACAATGCGCTTCTTAATGCCCTTGCTCGTCGAGGTGATTGGAGAGCAGCTGAATCTGTTTTCTCAGACATGAAAAGTAAGGGCTTTAAGCCCAGTGAAACTACTTACTCTTTGATGCTCCACTGCTATTCCAAGGGAGGGAACGTGAGAGGTGTGGAGAGAATCGCAAAGGAAATTTATGATGGTCATATTTTTCCT</genome_strand>
        <mrna_strand>CAATGTGTGGTAATAGGGGAATGCAAAAATATGTAAATCACGTTTTCCATGAGATGAAAAGCTGTGGTTTTGAGCCTGATAGAGACACATTTAATACTTTGATTCGTGCTTATGGAAGGTGTGATTCTGATTTTAATGCTGCAAAGATGTACGATGAGATGATCCAATCAGGATTCACTCCGTGTGTCACAACATACAATGCGCTTCTTAATGCCCTTGCTCGTCGAGGTGATTGGAGAGCAGCTGAATCTGTTTTCTCAGACATGAAAAGTAAGGGCTTTAAGCCCAGTGAAACTACTTACTCTTTGATGCTCCACTGCTATTCCAAGGGAGGGAACGTGAGAAGTGTGGAGAGAATCGCAAAGGAAATTTATGATGGTCCTATTTTTCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E264697" ref_strand="+" ref_description="SGN-E264697 [cLEG-72-E14]">
      <seq>gcaatgtgtggtaatagggngatgcaaaaatatgtaaatcacgttttccatgagatgaaaagctgtggttttgagcctgatagagacacatttaatactttgattcgtgcttatggaaggtgtgattctgattttaatgctgcaaagatgtacgatgagatgatccaatcaggattcactccgtgtgtcacaacatacaatgcgcttcttaatgcccttgctcgtcgaggtgattggagagcagctgaatctgttttctcagacatgaaaagtaagggctttaagcccagtgaaactacttactctatgatgctccactgctattccaagggagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="-" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="91415" stop="90481"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91115" g_stop="90781" g_length="335"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="335" r_length="335" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="-" ref_id="SGN-E264697" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>335</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E264697" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91115" e_stop="90781"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAATGTGTGGTAATAGGGGAATGCAAAAATATGTAAATCACGTTTTCCATGAGATGAAAAGCTGTGGTTTTGAGCCTGATAGAGACACATTTAATACTTTGATTCGTGCTTATGGAAGGTGTGATTCTGATTTTAATGCTGCAAAGATGTACGATGAGATGATCCAATCAGGATTCACTCCGTGTGTCACAACATACAATGCGCTTCTTAATGCCCTTGCTCGTCGAGGTGATTGGAGAGCAGCTGAATCTGTTTTCTCAGACATGAAAAGTAAGGGCTTTAAGCCCAGTGAAACTACTTACTCTTTGATGCTCCACTGCTATTCCAAGGGAGG</genome_strand>
        <mrna_strand>GCAATGTGTGGTAATAGGGNGATGCAAAAATATGTAAATCACGTTTTCCATGAGATGAAAAGCTGTGGTTTTGAGCCTGATAGAGACACATTTAATACTTTGATTCGTGCTTATGGAAGGTGTGATTCTGATTTTAATGCTGCAAAGATGTACGATGAGATGATCCAATCAGGATTCACTCCGTGTGTCACAACATACAATGCGCTTCTTAATGCCCTTGCTCGTCGAGGTGATTGGAGAGCAGCTGAATCTGTTTTCTCAGACATGAAAAGTAAGGGCTTTAAGCCCAGTGAAACTACTTACTCTATGATGCTCCACTGCTATTCCAAGGGAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E438593" ref_strand="+" ref_description="SGN-E438593 [cSTA-8-F18]">
      <seq>gtagggaatcacagcatttggtgacgtcaaaactgtttgatgttattccatttgaagattactcacttgatgttcgagccttggacaactgttctacatgcttattctcggattggcaagtatgacaaggcaattgcattgtttgaatatgtgaaagagaagggtttatctgccaccttggtaacttataatgttatgttagatgtttatggtaaaaagggtaggtcttggaacaatattttactgcttttagatgaaatgacaagtaacgggcttgaatttgacgagttcacttgtagcacggttatagctgcttgtgggagggaagggttgttggaggaagcaaaagagttttttgatggattgaagagaaagggttatgttccgggaacagttacttacaattctttact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="-" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="92248" stop="91237"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91948" g_stop="91537" g_length="412"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="413" r_length="413" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="-" ref_id="SGN-E438593" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>412</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E438593" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91948" e_stop="91537"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAGGGAATCACAGCATTTGGTGACGTCGAAACTGTTTGATGTTATTCCATTCGAAGATTACTCTCTTGATGTCCGAG-CGTGGACAACTGTTCTACATGCTTATTCTAGGATTGGCAAGTATGACAAGGCAATTGCATTGTTTGAATATGTGAAAGAGAAGGGTTTATCTGTCACTTTGGTAACTTATAATGTTATGTTAGATGTTTATGGTAAAAAGGGTAGGTCTTGGAACAATATTTTACTGCTTTTAGATGAAATGACAAGTAACGGGCTTGAATTTGACGAGTTCACTTGTAGCACGGTTATTGCTGCTTGTGGAAGGGAAGGGTTGTTGGAGGAAGCGAAAGAGTTTTTTGATGTATTGAAGAGAAAGGGTTATGTTCCGGGAACAGTTACTTACAATTCTTTACT</genome_strand>
        <mrna_strand>GTAGGGAATCACAGCATTTGGTGACGTCAAAACTGTTTGATGTTATTCCATTTGAAGATTACTCACTTGATGTTCGAGCCTTGGACAACTGTTCTACATGCTTATTCTCGGATTGGCAAGTATGACAAGGCAATTGCATTGTTTGAATATGTGAAAGAGAAGGGTTTATCTGCCACCTTGGTAACTTATAATGTTATGTTAGATGTTTATGGTAAAAAGGGTAGGTCTTGGAACAATATTTTACTGCTTTTAGATGAAATGACAAGTAACGGGCTTGAATTTGACGAGTTCACTTGTAGCACGGTTATAGCTGCTTGTGGGAGGGAAGGGTTGTTGGAGGAAGCAAAAGAGTTTTTTGATGGATTGAAGAGAAAGGGTTATGTTCCGGGAACAGTTACTTACAATTCTTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E736086" ref_strand="+" ref_description="SGN-E736086 [LC04BB10]">
      <seq>aattgaaatgagtgtgtgggtgtggtagaatccgctatctctcagtatagctttgccccgttcttttctctcaatcattctatctatcatcaaaaatgccgaattgagagtcttgtgccactccaatattatcttcagccatggaaggttctctcttccctaatagaccaatcttgccaatccaatcaacaaaaccaacacctttaccaccaacccagcgcctcaaattgaatcccaccaccaccacttcccctctcccacctctcaaacaacagcagcaacaaaccccttcttcttctacttctacttctttccctcttgattctcttctccaacatcttcttcatgtttcatcttcaaatcctccaagaactgttaaatcttcaagaattagcaatacccatttgtctactcttcctgtttctttggaaaatgatgacaccctttttgggaatacgagggttactgttcccaaaatggaatcttttgatgatgggtcacttgaatttctccctcttaactgtaagttaatgattgattcaattcttgaacgccctctttctcatatgactgaattctttgattctgtgaaacttgagttgcttgaagttgatttgatgagtcttttgaaaggcttagatgttttaggcaaatgggatagagctattttgttgtttgaatgggctgttttgaacattcatgttgaaaatgaaaagctagatagtcaagttattgaatttatggtgagggttttgggtagggaatcacagcatttggtgacgtcgaaactgtttgatgttattccattcgaagattactctcttgatgtccgagcgtggacaactgttctacatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="-" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="93004" stop="91548"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92704" g_stop="91848" g_length="857"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="857" r_length="857" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="-" ref_id="SGN-E736086" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>857</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E736086" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92704" e_stop="91848"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTGAAATGAGTGTGTGGGTGTGGTAGAATCCGCTATCTCTCAGTATAGCTTTGCCCCGTTCTTTTCTCTCAATCATTCTATCTATCATCAAAAATGCCGAATTGAGAGTCTTGTGCCACTCCAATATTATCTTCAGCCATGGAAGGTTCTCTCTTCCCTAATAGACCAATCTTGCCAATCCAATCAACAAAACCAACACCTTTACCACCAACCCAGCGCCTCAAATTGAATCCCACCACCACCACTTCCCCTCTCCCACCTCTCAAACAACAGCAGCAACAAACCCCTTCTTCTTCTACTTCTACTTCTTTCCCTCTTGATTCTCTTCTCCAACATCTTCTTCATGTTTCATCTTCAAATCCTCCAAGAACTGTTAAATCTTCAAGAATTAGCAATACCCATTTGTCTACTCTTCCTGTTTCTTTGGAAAATGATGACACCCTTTTTGGGAATACGAGGGTTACTGTTCCCAAAATGGAATCTTTTGATGATGGGTCACTTGAATTTCTCCCTCTTAACTGTAAGTTAATGATTGATTCAATTCTTGAACGCCCTCTTTCTCATATGACTGAATTCTTTGATTCTGTGAAACTTGAGTTGCTTGAAGTTGATTTGATGAGTCTTTTGAAAGGCTTAGATGTTTTAGGCAAATGGGATAGAGCTATTTTGTTGTTTGAATGGGCTGTTTTGAACATTCATGTTGAAAATGAAAAGCTAGATAGTCAAGTTATTGAATTTATGGTGAAGGTTTTGGGTAGGGAATCACAGCATTTGGTGACGTCGAAACTGTTTGATGTTATTCCATTCGAAGATTACTCTCTTGATGTCCGAGCGTGGACAACTGTTCTACATGCT</genome_strand>
        <mrna_strand>AATTGAAATGAGTGTGTGGGTGTGGTAGAATCCGCTATCTCTCAGTATAGCTTTGCCCCGTTCTTTTCTCTCAATCATTCTATCTATCATCAAAAATGCCGAATTGAGAGTCTTGTGCCACTCCAATATTATCTTCAGCCATGGAAGGTTCTCTCTTCCCTAATAGACCAATCTTGCCAATCCAATCAACAAAACCAACACCTTTACCACCAACCCAGCGCCTCAAATTGAATCCCACCACCACCACTTCCCCTCTCCCACCTCTCAAACAACAGCAGCAACAAACCCCTTCTTCTTCTACTTCTACTTCTTTCCCTCTTGATTCTCTTCTCCAACATCTTCTTCATGTTTCATCTTCAAATCCTCCAAGAACTGTTAAATCTTCAAGAATTAGCAATACCCATTTGTCTACTCTTCCTGTTTCTTTGGAAAATGATGACACCCTTTTTGGGAATACGAGGGTTACTGTTCCCAAAATGGAATCTTTTGATGATGGGTCACTTGAATTTCTCCCTCTTAACTGTAAGTTAATGATTGATTCAATTCTTGAACGCCCTCTTTCTCATATGACTGAATTCTTTGATTCTGTGAAACTTGAGTTGCTTGAAGTTGATTTGATGAGTCTTTTGAAAGGCTTAGATGTTTTAGGCAAATGGGATAGAGCTATTTTGTTGTTTGAATGGGCTGTTTTGAACATTCATGTTGAAAATGAAAAGCTAGATAGTCAAGTTATTGAATTTATGGTGAGGGTTTTGGGTAGGGAATCACAGCATTTGGTGACGTCGAAACTGTTTGATGTTATTCCATTCGAAGATTACTCTCTTGATGTCCGAGCGTGGACAACTGTTCTACATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E739711" ref_strand="+" ref_description="SGN-E739711 [LC18CC07]">
      <seq>cctataatgggattggaagtaattgaaatgagtgtgtgggtgtggtagaatccgctatctctcactatagctttgccccgttcttttctctctatcattctatctatcatcaaaaatgccgaattgagagtcttgtgccactccaatattatcttcagccatggaaggttctctcttccctaatagaccaatcttgccaatccaatcaacaaaaccaacacctttaccaccaacccatcgcctcaaattgaatctcaccaccaccacttcccctctcccacctctcaaacaacagcagcaactaaccccttcttcttctacttctacttctttccctcttgattctcttctccaacatcctcttcatgtttcatcttcaaatcctccaagaactgttaaatcttcaagaattagcaatacccatttgtctactcttcatgtttctttggaaaatgatgactccctttttgggaatacgagggttactgttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="-" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="93022" stop="91934"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92724" g_stop="92234" g_length="491"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="491" r_length="491" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="-" ref_id="SGN-E739711" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>491</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E739711" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92724" e_stop="92234"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTAGAGTTGGATTGGAAGTAATTGAAATGAGTGTGTGGGTGTGGTAGAATCCGCTATCTCTCAGTATAGCTTTGCCCCGTTCTTTTCTCTCAATCATTCTATCTATCATCAAAAATGCCGAATTGAGAGTCTTGTGCCACTCCAATATTATCTTCAGCCATGGAAGGTTCTCTCTTCCCTAATAGACCAATCTTGCCAATCCAATCAACAAAACCAACACCTTTACCACCAACCCAGCGCCTCAAATTGAATCCCACCACCACCACTTCCCCTCTCCCACCTCTCAAACAACAGCAGCAACAAACCCCTTCTTCTTCTACTTCTACTTCTTTCCCTCTTGATTCTCTTCTCCAACATCTTCTTCATGTTTCATCTTCAAATCCTCCAAGAACTGTTAAATCTTCAAGAATTAGCAATACCCATTTGTCTACTCTTCCTGTTTCTTTGGAAAATGATGACACCCTTTTTGGGAATACGAGGGTTACTGTTC</genome_strand>
        <mrna_strand>CCTATAATGGGATTGGAAGTAATTGAAATGAGTGTGTGGGTGTGGTAGAATCCGCTATCTCTCACTATAGCTTTGCCCCGTTCTTTTCTCTCTATCATTCTATCTATCATCAAAAATGCCGAATTGAGAGTCTTGTGCCACTCCAATATTATCTTCAGCCATGGAAGGTTCTCTCTTCCCTAATAGACCAATCTTGCCAATCCAATCAACAAAACCAACACCTTTACCACCAACCCATCGCCTCAAATTGAATCTCACCACCACCACTTCCCCTCTCCCACCTCTCAAACAACAGCAGCAACTAACCCCTTCTTCTTCTACTTCTACTTCTTTCCCTCTTGATTCTCTTCTCCAACATCCTCTTCATGTTTCATCTTCAAATCCTCCAAGAACTGTTAAATCTTCAAGAATTAGCAATACCCATTTGTCTACTCTTCATGTTTCTTTGGAAAATGATGACTCCCTTTTTGGGAATACGAGGGTTACTGTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E578039" ref_strand="+" ref_description="SGN-E578039 [LE08DB10]">
      <seq>cgagggtctttgttctaatacacttcaactcttggaatttgggtactgggatcacttctctgaacttcacgacgaacctgcaggacggaccgtcagatccacgacggaccgtcacaagcttcgtaatcccacacttagtcagacttccctatcttccttcagcagctgcactacgcttccacctacggaccgtcacaagcacgacggaccgtcataagctccgtaggtggtttcttctgcatttcttcgctcaaaatctccgcattcagctttggacagatttcctgcaaaacaaagagtaacttatataaaaattagcacaaaaaggcttttggacacactaagcttaaggaaaaagtattaataataccgtgaaaccacggtatatcaacaccctcaacttaaattagttgtttgtcctcaagcgacgcactatgactcactacacaatctttgtacaatagtatccatgttttatcctttgcaatcatttggctatcaatcccgattaatctcatcaaatctatgcatgctatcactattaggtttgaattttgtgggatcagaatatgacacagacttaccatgcactaacacctatcctcttcaatttctcaccgaggtgctaacaattctagtattgcaactagtgtcctcactataagacaaaatcctcctttttcacacagtgattttagtttgagtataaggattac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="+" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="99757" stop="101072"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100057" g_stop="100772" g_length="716"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="716" r_length="716" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="+" ref_id="SGN-E578039" ref_strand="+">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>716</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E578039" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100057" e_stop="100772"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAGGGTCTTCGTTCCAAAACACTTCAACTCTTGGAATCTTAGTACTAGGATCACTTCTCTGAACTTCACGACGAACCTGCAGGAAGGACCCTCATAGCCACGACGGACCGTCACAAGCTTCGTAATCCCACACTTGGTCAGACTTCCCCATCTTCCTTCAGCAGCTACACTACGCTGCCACCTACGGACCGTCACAAGCACGACGGACCGTCATATGCTCCGTAGGTGGTCTCTTCTGCATTTCTTCGCTCAAAATCTCGGCATTCAGCTTTGGACAGATTTCCTGCAAAACAAAGAGAAACTTATATAAAAATTAGCGCAAAAAGGCTTTTGGACACACTAAACTTAAGGGAAAAGTATTAATAATACCGTGAAACCATGGTATATCAATACCCTCAACTTAAATTCGTTGTTTGTCCTCAAGCGACGCACTATGACTCACTAGACAATCTTTGTACAATAGTATCTATGTTTTATCCTTTGCAATCATTTGGCTATCAATCCCGATTAATCTCATCAAATCTATGCATGCTATCGCTATTAGGCTTGAATTTTGTGGGATCAGAACATGACACAGACTCACCACGCACTAACACCTATCCTCTTCAATTTTTCACCGGGGTACTAGCAATTCTGGTATTGCAACTAGTGTCCTCACTTTAAAACAAAATCCTCCTTTTTCACACAATGATTTCACTTTGAGTATAAGGATTAC</genome_strand>
        <mrna_strand>CGAGGGTCTTTGTTCTAATACACTTCAACTCTTGGAATTTGGGTACTGGGATCACTTCTCTGAACTTCACGACGAACCTGCAGGACGGACCGTCAGATCCACGACGGACCGTCACAAGCTTCGTAATCCCACACTTAGTCAGACTTCCCTATCTTCCTTCAGCAGCTGCACTACGCTTCCACCTACGGACCGTCACAAGCACGACGGACCGTCATAAGCTCCGTAGGTGGTTTCTTCTGCATTTCTTCGCTCAAAATCTCCGCATTCAGCTTTGGACAGATTTCCTGCAAAACAAAGAGTAACTTATATAAAAATTAGCACAAAAAGGCTTTTGGACACACTAAGCTTAAGGAAAAAGTATTAATAATACCGTGAAACCACGGTATATCAACACCCTCAACTTAAATTAGTTGTTTGTCCTCAAGCGACGCACTATGACTCACTACACAATCTTTGTACAATAGTATCCATGTTTTATCCTTTGCAATCATTTGGCTATCAATCCCGATTAATCTCATCAAATCTATGCATGCTATCACTATTAGGTTTGAATTTTGTGGGATCAGAATATGACACAGACTTACCATGCACTAACACCTATCCTCTTCAATTTCTCACCGAGGTGCTAACAATTCTAGTATTGCAACTAGTGTCCTCACTATAAGACAAAATCCTCCTTTTTCACACAGTGATTTTAGTTTGAGTATAAGGATTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E577891" ref_strand="+" ref_description="SGN-E577891 [LE08BA04]">
      <seq>ttcgtttcaaaatacttcagctcttggaatctgggtactggaatcacttctctgatcttcacgacgaacctgcaggacggaccgtcatagccatgacggaccgtcacaatcttcgtaatcccacacttggtgagacttccccatcttccttcagcagcttctctacgctgccacctacggagcgtcaaaggcacgatggaccgtcataagctcagtaggtggtctcttctacattttttcgctcaaaatctctgctttcagctttggacagatttcctgcaaaataaagagaaacttataccaaaattagcacaaaaaggcttacggacacactaaacttaaggcaaaagtattaattataccgtgaaaccacggtatatcagggacatgaactcgaaggccattgttggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="+" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="99765" stop="100746"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100065" g_stop="100438" g_length="374"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="374" r_length="374" r_score="0.909"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="+" ref_id="SGN-E577891" ref_strand="+">
        <total_alignment_score>0.909</total_alignment_score>
        <cumulative_length_of_scored_exons>374</cumulative_length_of_scored_exons>
        <coverage percentage="0.910" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E577891" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100065" e_stop="100438"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGTTCCAAAACACTTCAACTCTTGGAATCTTAGTACTAGGATCACTTCTCTGAACTTCACGACGAACCTGCAGGAAGGACCCTCATAGCCACGACGGACCGTCACAAGCTTCGTAATCCCACACTTGGTCAGACTTCCCCATCTTCCTTCAGCAGCTACACTACGCTGCCACCTACGGACCGTCACAAGCACGACGGACCGTCATATGCTCCGTAGGTGGTCTCTTCTGCATTTCTTCGCTCAAAATCTCGGCATTCAGCTTTGGACAGATTTCCTGCAAAACAAAGAGAAACTTATATAAAAATTAGCGCAAAAAGGCTTTTGGACACACTAAACTTAAGGGAAAAGTATTAATAATACCGTGAAACCATG</genome_strand>
        <mrna_strand>TTCGTTTCAAAATACTTCAGCTCTTGGAATCTGGGTACTGGAATCACTTCTCTGATCTTCACGACGAACCTGCAGGACGGACCGTCATAGCCATGACGGACCGTCACAATCTTCGTAATCCCACACTTGGTGAGACTTCCCCATCTTCCTTCAGCAGCTTCTCTACGCTGCCACCTACGGAGCGTCAAAGGCACGATGGACCGTCATAAGCTCAGTAGGTGGTCTCTTCTACATTTTTTCGCTCAAAATCTCTGCTTTCAGCTTTGGACAGATTTCCTGCAAAATAAAGAGAAACTTATACCAAAATTAGCACAAAAAGGCTTACGGACACACTAAACTTAAGGCAAAAGTATTAATTATACCGTGAAACCACG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-H6kJEj/sgn_ests_tomato_potato" ref_id="SGN-E351864" ref_strand="+" ref_description="SGN-E351864 [cTOS-8-K24]">
      <seq>acttcgaaggtgtttctccctgtatcagacttcctagtactccaaactttgttattccgggagattttcactaatttttaagcgatctcagcataagggcattctccataagatccaccttctataatgtccaacacttctttgttactatcatcctgtccctgatagaactatttcttccgtgactcatcatctatacagtgatttggaacacttctcaagaatgaggtgatctatcccaagaactactaactgactctactggtagtgccacaaaattatttactctgtctttgtggtttagtttcttcgagattggatagtagagtgccaagaaaacatctcttaattggttccaagtgaagattgagttgcatggaagctcagtgaaccatataggagcctctcccttcagtgagagaggaaacactgtgagccctattacatctagatccatgtcaggcctccccacactacatttacacactgcccttaccttagctatttgggcatgtggatcctcaggcggtagccctgaaaacaaacctctagcagtgagcatttgcatcaggctactagttaccataaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0028J09-kT7tj/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0028J09.2" temp_strand="+" temp_description="C07HBa0028J09.2  AC212609.2 htgs_phase:2 submitted_to_sgn_as:gi|167832396|gb|AC212609.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0028J09, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="103980" stop="105168"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104280" g_stop="104868" g_length="589"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="589" r_length="589" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0028J09.2" gen_strand="+" ref_id="SGN-E351864" ref_strand="+">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>589</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0028J09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E351864" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104280" e_stop="104868"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTGCGAAGGTGTTTCTCCCTGTATCAGACTTCCTAGTACTCCAAGATTTGTTATTCCGGGAGATTTTCTCTAATTTTTTAGCGATCTCAGCATAAGGGCATTATCCATAGGATCCACCTGCTACAGTGTCCAACACCGCTTTGTTGTTATCATCCTGTCCCCGATAGAAGTATTCCTTCAGTGACTCATCATCTATACGGTGATTT-GAACACTTCTCAAGAATGAGGTGAATCTATCCCAAGAACTACTAACTGACTCTCCTGGTAGTGCCACAAAGTTGTTCACTCTGTCTTTGTGGTTTAGTTTCTTGGAGACCGGATAGTAGCGTGCTAAGAAGACATTTCTTAATTGGTTCCAAGTGAAGATTAAGTTGTATGGGAGCTCAGTGAACCACATAGCAGCCTATCCCGTCAGTAAGAGAGGAAACACTCTGAGCCCTATTACATCTAGATCCAAATCAGGCCTCCCCACACAACTTTTACACACTGCCCTTACATTAGCTATATGGGCATGTGGATCCTCAGAAGGTAGCCCTAAAAACAAACCTCTGTCAGTGAGCATTTGCATCACGCTACTAGTCACCACAAA</genome_strand>
        <mrna_strand>ACTTCGAAGGTGTTTCTCCCTGTATCAGACTTCCTAGTACTCCAAACTTTGTTATTCCGGGAGATTTTCACTAATTTTTAAGCGATCTCAGCATAAGGGCATTCTCCATAAGATCCACCTTCTATAATGTCCAACACTTCTTTGTTACTATCATCCTGTCCCTGATAGAACTATTTCTTCCGTGACTCATCATCTATACAGTGATTTGGAACACTTCTCAAGAATGAGGTG-ATCTATCCCAAGAACTACTAACTGACTCTACTGGTAGTGCCACAAAATTATTTACTCTGTCTTTGTGGTTTAGTTTCTTCGAGATTGGATAGTAGAGTGCCAAGAAAACATCTCTTAATTGGTTCCAAGTGAAGATTGAGTTGCATGGAAGCTCAGTGAACCATATAGGAGCCTCTCCCTTCAGTGAGAGAGGAAACACTGTGAGCCCTATTACATCTAGATCCATGTCAGGCCTCCCCACACTACATTTACACACTGCCCTTACCTTAGCTATTTGGGCATGTGGATCCTCAGGCGGTAGCCCTGAAAACAAACCTCTAGCAGTGAGCATTTGCATCAGGCTACTAGTTACCATAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>46</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="7182" PGL_stop="7723"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="7182" e_stop="7723"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.906"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.906">
            <gDNA_exon_boundary e_start="7182" e_stop="7723" e_length="542"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7182" stop="7723"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353207" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTAGCATGCAATGTTTTCCAAAACTTAGAAGTAAATTGCGTACCTCTATCTGATATGATGGAAAGTGGAACTCCATGCAATCGAACAATTTCTGAGATATAGAGCCTGGCTAACTTCTCTGCATTGTAAGTCACCTTGACCGGAATGAAATGAGCAGACTTGGTTAATCTGTCAACGATTACTTAAATGGAGTCATACTTACCCAGTGTCTTTGGAAGACCAACCACAAAGTTCATTGCAATTCTCTCCCACTTCCATTCAGGAATGGGCATTCTCTGAAGTGTTCCTCCAGGCCTCTGGTGTTCATACTTTACTTGCTGACAATTCGGGCATTGAGCAACAAAGTCAACAATGTCGCGCTTCATCCTACTCCACCAGAAATGTTGCTTTAGGTCGCGATACATCTTGGTTGCACCAGGATGTATAGAACACCTTGAACTATGAGCCTCTGTAAGAATAGTGTGAATCAAATCATCTGCACGAGGTAGACATACCCTTCCCTTAATTCTCAAAACACCTTCCTCGTCGATTTTTGCTTCTTT</gDNA_template>
            <first_frame> L  A  C  N  V  F  Q  N  L  E  V  N  C  V  P  L  S  D  M  M  E  S  G  T  P  C  N  R  T  I  S  E  I  *  S  L  A  N  F  S  A  L  *  V  T  L  T  G  M  K  *  A  D  L  V  N  L  S  T  I  T  *  M  E  S  Y  L  P  S  V  F  G  R  P  T  T  K  F  I  A  I  L  S  H  F  H  S  G  M  G  I  L  *  S  V  P  P  G  L  W  C  S  Y  F  T  C  *  Q  F  G  H  *  A  T  K  S  T  M  S  R  F  I  L  L  H  Q  K  C  C  F  R  S  R  Y  I  L  V  A  P  G  C  I  E  H  L  E  L  *  A  S  V  R  I  V  *  I  K  S  S  A  R  G  R  H  T  L  P  L  I  L  K  T  P  S  S  S  I  F  A  S   </first_frame>
            <second_frame>  *  H  A  M  F  S  K  T  *  K  *  I  A  Y  L  Y  L  I  *  W  K  V  E  L  H  A  I  E  Q  F  L  R  Y  R  A  W  L  T  S  L  H  C  K  S  P  *  P  E  *  N  E  Q  T  W  L  I  C  Q  R  L  L  K  W  S  H  T  Y  P  V  S  L  E  D  Q  P  Q  S  S  L  Q  F  S  P  T  S  I  Q  E  W  A  F  S  E  V  F  L  Q  A  S  G  V  H  T  L  L  A  D  N  S  G  I  E  Q  Q  S  Q  Q  C  R  A  S  S  Y  S  T  R  N  V  A  L  G  R  D  T  S  W  L  H  Q  D  V  *  N  T  L  N  Y  E  P  L  *  E  *  C  E  S  N  H  L  H  E  V  D  I  P  F  P  *  F  S  K  H  L  P  R  R  F  L  L  L  </second_frame>
            <third_frame>   S  M  Q  C  F  P  K  L  R  S  K  L  R  T  S  I  *  Y  D  G  K  W  N  S  M  Q  S  N  N  F  *  D  I  E  P  G  *  L  L  C  I  V  S  H  L  D  R  N  E  M  S  R  L  G  *  S  V  N  D  Y  L  N  G  V  I  L  T  Q  C  L  W  K  T  N  H  K  V  H  C  N  S  L  P  L  P  F  R  N  G  H  S  L  K  C  S  S  R  P  L  V  F  I  L  Y  L  L  T  I  R  A  L  S  N  K  V  N  N  V  A  L  H  P  T  P  P  E  M  L  L  *  V  A  I  H  L  G  C  T  R  M  Y  R  T  P  *  T  M  S  L  C  K  N  S  V  N  Q  I  I  C  T  R  *  T  Y  P  S  L  N  S  Q  N  T  F  L  V  D  F  C  F  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0028J09.2" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7330" stop="7608"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>276</number_coding_nucleotides>
                  <number_encoded_amino_acids>92</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NEQTWLICQRLLKWSHTYPVSLEDQPQSSLQFSPTSIQEWAFSEVFLQASGVHTLLADNSGIEQQSQQCRASSYSTRNVALGRDTSWLHQDV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0028J09.2" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7349" stop="7573"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SVNDYLNGVILTQCLWKTNHKVHCNSLPLPFRNGHSLKCSSRPLVFILYLLTIRALSNKVNNVALHPTPPEMLL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="9733" PGL_stop="9073"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="9733" e_stop="9073"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.914"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.914">
            <gDNA_exon_boundary e_start="9733" e_stop="9073" e_length="661"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9733" stop="9073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352117" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTGATCATGGATCCACATTTTCATATGTATCTTCCTCATTTGCTACTGGTCTTAATTTACATTGTGAATTGCTTGACATGCCTATTCGTGTTTCTACTCTGGTGGGTGAGTCTGTGATAGTTGAAAAGGTGTATAGGTCTTGTCCTGTGACTTTTATGGAGAGCAATACTCATGTAGACTTGGTTATCTTAGAAATGGTTGATTTCGATGTAATTCTAGGTATGACTTGGCTTTCTCCAAATTTTGCAATCTTAGATTGCAATGCCAAAACTGTTACATTGGCCAAGCCTGAGATAGATCCGTTCGTGTGGGAGGGTGACTACACTTCCACTCCAGTTTGTATCATCTCCTTCATTAGTGCTAAGAGAATGGTTAGAAAGGGTTGTTTAGCTTTCTTGGCACACCTCAGGGATGATACTACCCAAGTACCCTCAATTGAGTCGGTTTAAATAGTCTGTGAGTTTCTGGATGTGTTTCCTACAAACCTTCCGGGTATGCCACCGGATAGGGATATCGACTTTTGCATTGATCTGGAGCCGAGTACTCATCCCATTTCCATACCCCCTTATAGGATGGCTCCCACTGAGTTAAGAGAGTTAAAGGCCCAACTTCAAGAGTTGTTAAGCAAAGGCTTTATTAGACCAAGTGCATCCCCTTGGG</gDNA_template>
            <first_frame> F  D  H  G  S  T  F  S  Y  V  S  S  S  F  A  T  G  L  N  L  H  C  E  L  L  D  M  P  I  R  V  S  T  L  V  G  E  S  V  I  V  E  K  V  Y  R  S  C  P  V  T  F  M  E  S  N  T  H  V  D  L  V  I  L  E  M  V  D  F  D  V  I  L  G  M  T  W  L  S  P  N  F  A  I  L  D  C  N  A  K  T  V  T  L  A  K  P  E  I  D  P  F  V  W  E  G  D  Y  T  S  T  P  V  C  I  I  S  F  I  S  A  K  R  M  V  R  K  G  C  L  A  F  L  A  H  L  R  D  D  T  T  Q  V  P  S  I  E  S  V  *  I  V  C  E  F  L  D  V  F  P  T  N  L  P  G  M  P  P  D  R  D  I  D  F  C  I  D  L  E  P  S  T  H  P  I  S  I  P  P  Y  R  M  A  P  T  E  L  R  E  L  K  A  Q  L  Q  E  L  L  S  K  G  F  I  R  P  S  A  S  P  W  </first_frame>
            <second_frame>  L  I  M  D  P  H  F  H  M  Y  L  P  H  L  L  L  V  L  I  Y  I  V  N  C  L  T  C  L  F  V  F  L  L  W  W  V  S  L  *  *  L  K  R  C  I  G  L  V  L  *  L  L  W  R  A  I  L  M  *  T  W  L  S  *  K  W  L  I  S  M  *  F  *  V  *  L  G  F  L  Q  I  L  Q  S  *  I  A  M  P  K  L  L  H  W  P  S  L  R  *  I  R  S  C  G  R  V  T  T  L  P  L  Q  F  V  S  S  P  S  L  V  L  R  E  W  L  E  R  V  V  *  L  S  W  H  T  S  G  M  I  L  P  K  Y  P  Q  L  S  R  F  K  *  S  V  S  F  W  M  C  F  L  Q  T  F  R  V  C  H  R  I  G  I  S  T  F  A  L  I  W  S  R  V  L  I  P  F  P  Y  P  L  I  G  W  L  P  L  S  *  E  S  *  R  P  N  F  K  S  C  *  A  K  A  L  L  D  Q  V  H  P  L  G </second_frame>
            <third_frame>   *  S  W  I  H  I  F  I  C  I  F  L  I  C  Y  W  S  *  F  T  L  *  I  A  *  H  A  Y  S  C  F  Y  S  G  G  *  V  C  D  S  *  K  G  V  *  V  L  S  C  D  F  Y  G  E  Q  Y  S  C  R  L  G  Y  L  R  N  G  *  F  R  C  N  S  R  Y  D  L  A  F  S  K  F  C  N  L  R  L  Q  C  Q  N  C  Y  I  G  Q  A  *  D  R  S  V  R  V  G  G  *  L  H  F  H  S  S  L  Y  H  L  L  H  *  C  *  E  N  G  *  K  G  L  F  S  F  L  G  T  P  Q  G  *  Y  Y  P  S  T  L  N  *  V  G  L  N  S  L  *  V  S  G  C  V  S  Y  K  P  S  G  Y  A  T  G  *  G  Y  R  L  L  H  *  S  G  A  E  Y  S  S  H  F  H  T  P  L  *  D  G  S  H  *  V  K  R  V  K  G  P  T  S  R  V  V  K  Q  R  L  Y  *  T  K  C  I  P  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0028J09.2" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9733" stop="9284"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>447</number_coding_nucleotides>
                  <number_encoded_amino_acids>149</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FDHGSTFSYVSSSFATGLNLHCELLDMPIRVSTLVGESVIVEKVYRSCPVTFMESNTHVDLVILEMVDFDVILGMTWLSPNFAILDCNAKTVTLAKPEIDPFVWEGDYTSTPVCIISFISAKRMVRKGCLAFLAHLRDDTTQVPSIESV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0028J09.2" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9283" stop="9074"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IVCEFLDVFPTNLPGMPPDRDIDFCIDLEPSTHPISIPPYRMAPTELRELKAQLQELLSKGFIRPSASPW</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="9433" PGL_stop="9763"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="9433" e_stop="9763"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.915"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.915">
            <gDNA_exon_boundary e_start="9433" e_stop="9763" e_length="331"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9433" stop="9763"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352716" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GATCTATCTCAGGCTTGGCCAATGTAACAGTTTTGGCATTGCAATCTAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCTAGAATTACATCGAAATCAACCATTTCTAAGATAACCAAGTCTACATGAGTATTGCTCTCCATAAAAGTCACAGGACAAGACCTATACACCTTTTCAACTATCACAGACTCACCCACCAGAGTAGAAACACGAATAGGCATGTCAAGCAATTCACAATGTAAATTAAGACCAGTAGCAAATGAGGAAGATACATATGAAAATGTGGATCCATGATCAAATAATACAAAAGTCATGCAAGCACAAACCAA</gDNA_template>
            <first_frame> D  L  S  Q  A  W  P  M  *  Q  F  W  H  C  N  L  R  L  Q  N  L  E  K  A  K  S  Y  L  E  L  H  R  N  Q  P  F  L  R  *  P  S  L  H  E  Y  C  S  P  *  K  S  Q  D  K  T  Y  T  P  F  Q  L  S  Q  T  H  P  P  E  *  K  H  E  *  A  C  Q  A  I  H  N  V  N  *  D  Q  *  Q  M  R  K  I  H  M  K  M  W  I  H  D  Q  I  I  Q  K  S  C  K  H  K  P  </first_frame>
            <second_frame>  I  Y  L  R  L  G  Q  C  N  S  F  G  I  A  I  *  D  C  K  I  W  R  K  P  S  H  T  *  N  Y  I  E  I  N  H  F  *  D  N  Q  V  Y  M  S  I  A  L  H  K  S  H  R  T  R  P  I  H  L  F  N  Y  H  R  L  T  H  Q  S  R  N  T  N  R  H  V  K  Q  F  T  M  *  I  K  T  S  S  K  *  G  R  Y  I  *  K  C  G  S  M  I  K  *  Y  K  S  H  A  S  T  N  Q </second_frame>
            <third_frame>   S  I  S  G  L  A  N  V  T  V  L  A  L  Q  S  K  I  A  K  F  G  E  S  Q  V  I  P  R  I  T  S  K  S  T  I  S  K  I  T  K  S  T  *  V  L  L  S  I  K  V  T  G  Q  D  L  Y  T  F  S  T  I  T  D  S  P  T  R  V  E  T  R  I  G  M  S  S  N  S  Q  C  K  L  R  P  V  A  N  E  E  D  T  Y  E  N  V  D  P  *  S  N  N  T  K  V  M  Q  A  Q  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0028J09.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="10998" PGL_stop="10343"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="10998" e_stop="10343"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.901"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.901">
            <gDNA_exon_boundary e_start="10998" e_stop="10343" e_length="656"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10998" stop="10343"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E728374" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAATGATTAATCAGGTTCTTACTTATCTTAGTGGGTTATCTGATCAGGGCCAGACACCTCCAGTGTTTTCTGCACCAGCGCCTCAGGTTCCGAGAGTACAACATGCAGCTGCTGTGGCCCACCGCATGGATGCCTCATTGGAAATAGGCACGTTTCCTCGGTTAACTACAGGGACCATAATGACAAGTGATCAGCATGAACTCTTCAGTAAGTTCTTGAAATTGAAACCTCAAGTCTTCAAGGGTGCTGAATCTGAGGATGCCTACGATTTTCTGGTTGATTGTCATGAACTACTACACAAGATGGGTATAGTAGAACGATTTGGCGTCGAGTTTGTGACCTATCAATTTCAAGGGAATGCCAAAATTTGGTGGGGATCGTATGTTGAATGTCAACCAGCACAAGCACCACCTATGACTTGGGCATCATTCTCTAGTTTGTTTTTGGAGAAGTATATACCCCGGACTTTGAGGGATAGGAGGAGAGATGAGTTCTTGAGCCTAGAGTAAGGAAGAATGTCGGTTACTGCTTATGAGGCTAAGTTTTGTGCACTATCTAGGTATGCCACCCAGCTTTGCTTCAGTCCACAAGAGCGGATTCGCCGTTTCGTGAAAGGGTTGAGGTCAGATTTGCAGATTTCAGCCTTACAGGTAGCT</gDNA_template>
            <first_frame> K  *  L  I  R  F  L  L  I  L  V  G  Y  L  I  R  A  R  H  L  Q  C  F  L  H  Q  R  L  R  F  R  E  Y  N  M  Q  L  L  W  P  T  A  W  M  P  H  W  K  *  A  R  F  L  G  *  L  Q  G  P  *  *  Q  V  I  S  M  N  S  S  V  S  S  *  N  *  N  L  K  S  S  R  V  L  N  L  R  M  P  T  I  F  W  L  I  V  M  N  Y  Y  T  R  W  V  *  *  N  D  L  A  S  S  L  *  P  I  N  F  K  G  M  P  K  F  G  G  D  R  M  L  N  V  N  Q  H  K  H  H  L  *  L  G  H  H  S  L  V  C  F  W  R  S  I  Y  P  G  L  *  G  I  G  G  E  M  S  S  *  A  *  S  K  E  E  C  R  L  L  L  M  R  L  S  F  V  H  Y  L  G  M  P  P  S  F  A  S  V  H  K  S  G  F  A  V  S  *  K  G  *  G  Q  I  C  R  F  Q  P  Y  R  *   </first_frame>
            <second_frame>  N  D  *  S  G  S  Y  L  S  *  W  V  I  *  S  G  P  D  T  S  S  V  F  C  T  S  A  S  G  S  E  S  T  T  C  S  C  C  G  P  P  H  G  C  L  I  G  N  R  H  V  S  S  V  N  Y  R  D  H  N  D  K  *  S  A  *  T  L  Q  *  V  L  E  I  E  T  S  S  L  Q  G  C  *  I  *  G  C  L  R  F  S  G  *  L  S  *  T  T  T  Q  D  G  Y  S  R  T  I  W  R  R  V  C  D  L  S  I  S  R  E  C  Q  N  L  V  G  I  V  C  *  M  S  T  S  T  S  T  T  Y  D  L  G  I  I  L  *  F  V  F  G  E  V  Y  T  P  D  F  E  G  *  E  E  R  *  V  L  E  P  R  V  R  K  N  V  G  Y  C  L  *  G  *  V  L  C  T  I  *  V  C  H  P  A  L  L  Q  S  T  R  A  D  S  P  F  R  E  R  V  E  V  R  F  A  D  F  S  L  T  G  S  </second_frame>
            <third_frame>   M  I  N  Q  V  L  T  Y  L  S  G  L  S  D  Q  G  Q  T  P  P  V  F  S  A  P  A  P  Q  V  P  R  V  Q  H  A  A  A  V  A  H  R  M  D  A  S  L  E  I  G  T  F  P  R  L  T  T  G  T  I  M  T  S  D  Q  H  E  L  F  S  K  F  L  K  L  K  P  Q  V  F  K  G  A  E  S  E  D  A  Y  D  F  L  V  D  C  H  E  L  L  H  K  M  G  I  V  E  R  F  G  V  E  F  V  T  Y  Q  F  Q  G  N  A  K  I  W  W  G  S  Y  V  E  C  Q  P  A  Q  A  P  P  M  T  W  A  S  F  S  S  L  F  L  E  K  Y  I  P  R  T  L  R  D  R  R  R  D  E  F  L  S  L  E  *  G  R  M  S  V  T  A  Y  E  A  K  F  C  A  L  S  R  Y  A  T  Q  L  C  F  S  P  Q  E  R  I  R  R  F  V  K  G  L  R  S  D  L  Q  I  S  A  L  Q  V  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0028J09.2" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10996" stop="10490"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>504</number_coding_nucleotides>
                  <number_encoded_amino_acids>168</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MINQVLTYLSGLSDQGQTPPVFSAPAPQVPRVQHAAAVAHRMDASLEIGTFPRLTTGTIMTSDQHELFSKFLKLKPQVFKGAESEDAYDFLVDCHELLHKMGIVERFGVEFVTYQFQGNAKIWWGSYVECQPAQAPPMTWASFSSLFLEKYIPRTLRDRRRDEFLSLE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="13589" PGL_stop="13030"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="13589" e_stop="13030"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.951"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.951">
            <gDNA_exon_boundary e_start="13589" e_stop="13030" e_length="560"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13589" stop="13135"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396070" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13588" stop="13030"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231589" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13588" stop="13043"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241959" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13588" stop="13116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236652" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATCGATTCTCCTTCTCTCTCTTTCTGTTCTTTTCTTTTTCTTATTCAAACCCTCTTTCTTTTACCCTAATTAACATGTAATTAAGTGTAAAAGATGACAATAATAACCCACAATTTAACTCAAGGTTACCTCTTTTATCCCCCAAGAAATTAGACTTATTAACATAAACCCACTAACTTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTTAAGAAATCCGATCCAGACTGGGATTACGCAACCTGTAACGGCCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGCAAGGTTCAGAGACTCAATTTCCACCAAACAGTCTGTGACGGTCCGTCACACCCGTGACGGTCCGTCCTGCCATTCCATTACGAAGTTCAGAGAGTCGATTTTCAGTACCCAATTTCAGAATTTCTAAGTGTTTTGAAATGAGACCCCTCGACGGTCCGTCGTGCTCATGACGGTCCGTCGTGGGTTCCGTCGTCTCAGCCTGTTTTTCCAGAAATAAAATCTGCTACTCAAAACGACTAAACAGGTCGTTACATAT</gDNA_template>
            <first_frame> I  D  S  P  S  L  S  F  C  S  F  L  F  L  I  Q  T  L  F  L  L  P  *  L  T  C  N  *  V  *  K  M  T  I  I  T  H  N  L  T  Q  G  Y  L  F  Y  P  P  R  N  *  T  Y  *  H  K  P  T  N  F  I  I  K  V  G  I  V  Q  N  V  P  *  N  V  L  R  N  P  I  Q  T  G  I  T  Q  P  V  T  A  R  R  A  C  D  G  P  S  C  R  S  S  Q  G  S  E  T  Q  F  P  P  N  S  L  *  R  S  V  T  P  V  T  V  R  P  A  I  P  L  R  S  S  E  S  R  F  S  V  P  N  F  R  I  S  K  C  F  E  M  R  P  L  D  G  P  S  C  S  *  R  S  V  V  G  S  V  V  S  A  C  F  S  R  N  K  I  C  Y  S  K  R  L  N  R  S  L  H   </first_frame>
            <second_frame>  S  I  L  L  L  S  L  S  V  L  F  F  F  L  F  K  P  S  F  F  Y  P  N  *  H  V  I  K  C  K  R  *  Q  *  *  P  T  I  *  L  K  V  T  S  F  I  P  Q  E  I  R  L  I  N  I  N  P  L  T  L  *  L  K  *  E  *  S  K  T  S  L  K  T  C  *  E  I  R  S  R  L  G  L  R  N  L  *  R  P  V  V  P  A  T  V  R  P  A  G  R  R  K  V  Q  R  L  N  F  H  Q  T  V  C  D  G  P  S  H  P  *  R  S  V  L  P  F  H  Y  E  V  Q  R  V  D  F  Q  Y  P  I  S  E  F  L  S  V  L  K  *  D  P  S  T  V  R  R  A  H  D  G  P  S  W  V  P  S  S  Q  P  V  F  P  E  I  K  S  A  T  Q  N  D  *  T  G  R  Y  I  </second_frame>
            <third_frame>   R  F  S  F  S  L  F  L  F  F  S  F  S  Y  S  N  P  L  S  F  T  L  I  N  M  *  L  S  V  K  D  D  N  N  N  P  Q  F  N  S  R  L  P  L  L  S  P  K  K  L  D  L  L  T  *  T  H  *  L  Y  N  *  S  R  N  S  P  K  R  P  L  K  R  V  K  K  S  D  P  D  W  D  Y  A  T  C  N  G  P  S  C  L  R  R  S  V  L  Q  V  V  A  R  F  R  D  S  I  S  T  K  Q  S  V  T  V  R  H  T  R  D  G  P  S  C  H  S  I  T  K  F  R  E  S  I  F  S  T  Q  F  Q  N  F  *  V  F  *  N  E  T  P  R  R  S  V  V  L  M  T  V  R  R  G  F  R  R  L  S  L  F  F  Q  K  *  N  L  L  L  K  T  T  K  Q  V  V  T  Y </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0028J09.2" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="13401" stop="13159"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SRNSPKRPLKRVKKSDPDWDYATCNGPSCLRRSVLQVVARFRDSISTKQSVTVRHTRDGPSCHSITKFRESIFSTQFQNF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="14300" PGL_stop="14536"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="14300" e_stop="14536"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.903"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.903">
            <gDNA_exon_boundary e_start="14300" e_stop="14536" e_length="237"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14300" stop="14536"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209683" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAATGAACCTAAATCCCAAATGAGTATGATGAGGAGGCGTGAGTCCTCATTGATGAGCTTGGTGTTGTAACCAAGGGTTATGGTAATTGTAAATGCTGCATGCTAAGGATATTAGTTGAGTTTGTGATGTTATCTGATATATACTGTTTTCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCCTACTTTTATGTTTTCTTCTTTGTTATTTGTG</gDNA_template>
            <first_frame> *  *  T  *  I  P  N  E  Y  D  E  E  A  *  V  L  I  D  E  L  G  V  V  T  K  G  Y  G  N  C  K  C  C  M  L  R  I  L  V  E  F  V  M  L  S  D  I  Y  C  F  L  F  *  V  G  R  *  Y  L  L  S  T  R  V  L  Y  *  P  P  T  F  M  F  S  S  L  L  F  V </first_frame>
            <second_frame>  N  E  P  K  S  Q  M  S  M  M  R  R  R  E  S  S  L  M  S  L  V  L  *  P  R  V  M  V  I  V  N  A  A  C  *  G  Y  *  L  S  L  *  C  Y  L  I  Y  T  V  F  Y  F  E  L  A  D  D  I  Y  S  V  P  V  F  C  T  D  P  L  L  L  C  F  L  L  C  Y  L   </second_frame>
            <third_frame>   M  N  L  N  P  K  *  V  *  *  G  G  V  S  P  H  *  *  A  W  C  C  N  Q  G  L  W  *  L  *  M  L  H  A  K  D  I  S  *  V  C  D  V  I  *  Y  I  L  F  S  I  L  S  W  P  M  I  S  T  Q  Y  P  C  F  V  L  T  P  Y  F  Y  V  F  F  F  V  I  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0028J09.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="14945" PGL_stop="15231"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="14945" e_stop="15231"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.913"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.913">
            <gDNA_exon_boundary e_start="14945" e_stop="15231" e_length="287"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14945" stop="15231"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355114" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTAGGTTCGTTGGTCTCATCACACAAGAACGAGTCTAGTAGAGCCTTAAGGAACGGTAGGGGGACGCCTTTACTTTTCTTTGAGAGGCTATAAGACTTTAGGAAAAATTCCATTCTTTCTTTCTTTCTTTCGTGCTACTACTTGGATCCAATTGGTATCTAGGTGATACAAATTGGTATCTGACCATCTTCACTCTATTTCGCGGATGGTTAGAACTAGAGCAACGACTGCGCCAACACCAACATCGGCAAGATAAGAAGCGTCTGAGCCAGCCACTGGGGCTGTAG</gDNA_template>
            <first_frame> L  G  S  L  V  S  S  H  K  N  E  S  S  R  A  L  R  N  G  R  G  T  P  L  L  F  F  E  R  L  *  D  F  R  K  N  S  I  L  S  F  F  L  S  C  Y  Y  L  D  P  I  G  I  *  V  I  Q  I  G  I  *  P  S  S  L  Y  F  A  D  G  *  N  *  S  N  D  C  A  N  T  N  I  G  K  I  R  S  V  *  A  S  H  W  G  C   </first_frame>
            <second_frame>  *  V  R  W  S  H  H  T  R  T  S  L  V  E  P  *  G  T  V  G  G  R  L  Y  F  S  L  R  G  Y  K  T  L  G  K  I  P  F  F  L  S  F  F  R  A  T  T  W  I  Q  L  V  S  R  *  Y  K  L  V  S  D  H  L  H  S  I  S  R  M  V  R  T  R  A  T  T  A  P  T  P  T  S  A  R  *  E  A  S  E  P  A  T  G  A  V  </second_frame>
            <third_frame>   R  F  V  G  L  I  T  Q  E  R  V  *  *  S  L  K  E  R  *  G  D  A  F  T  F  L  *  E  A  I  R  L  *  E  K  F  H  S  F  F  L  S  F  V  L  L  L  G  S  N  W  Y  L  G  D  T  N  W  Y  L  T  I  F  T  L  F  R  G  W  L  E  L  E  Q  R  L  R  Q  H  Q  H  R  Q  D  K  K  R  L  S  Q  P  L  G  L  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0028J09.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="15305" PGL_stop="15858"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="15305" e_stop="15858"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.921"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.921">
            <gDNA_exon_boundary e_start="15305" e_stop="15858" e_length="554"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15305" stop="15858"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329287" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15510" stop="15848"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245958" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACCTAGCCCATCTGATACTAGGGCGGTGACTCCCCCACCAACTGAAGAAGTAATAAGAGAAGGGGAGGATGGGGAAAATGAACAAGTGTGGAATGAGGAATTGCCACCCCAACCTACCCCAGAAATGATCAATCAGGTTCTTGCTTATCTTAGCGGGTTATCTGATCAAGGCCAGACACCTCCAGTGTTTTCTGCACCAGCACCTCAGGCTCCGGAGGTACAACATGCGGCTACTGTGGCTCCCCGCATGGATGCCTCATTGGAAATAGGCACATTTCCTCGTCTGACTACAGGGCCTGTAATGACAAATGATCAGCATGAACTTTTCAGTAAGTTCTTGAATTTGAAACCTCCAGTCTTCAAGGGTGCTGAATCGAAGGATGCTTATGATTTTCTGGTTGATTGTCACGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTGAAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTAGCGGTCACATGTTGAGTTTCAACCAACAGAGGCACCACCTATGACTTGGGCCTCATTTT</gDNA_template>
            <first_frame> T  *  P  I  *  Y  *  G  G  D  S  P  T  N  *  R  S  N  K  R  R  G  G  W  G  K  *  T  S  V  E  *  G  I  A  T  P  T  Y  P  R  N  D  Q  S  G  S  C  L  S  *  R  V  I  *  S  R  P  D  T  S  S  V  F  C  T  S  T  S  G  S  G  G  T  T  C  G  Y  C  G  S  P  H  G  C  L  I  G  N  R  H  I  S  S  S  D  Y  R  A  C  N  D  K  *  S  A  *  T  F  Q  *  V  L  E  F  E  T  S  S  L  Q  G  C  *  I  E  G  C  L  *  F  S  G  *  L  S  R  A  T  T  Q  D  G  Y  S  R  T  V  W  C  E  V  C  D  L  S  V  S  R  E  R  Q  N  V  V  A  V  T  C  *  V  S  T  N  R  G  T  T  Y  D  L  G  L  I   </first_frame>
            <second_frame>  P  S  P  S  D  T  R  A  V  T  P  P  P  T  E  E  V  I  R  E  G  E  D  G  E  N  E  Q  V  W  N  E  E  L  P  P  Q  P  T  P  E  M  I  N  Q  V  L  A  Y  L  S  G  L  S  D  Q  G  Q  T  P  P  V  F  S  A  P  A  P  Q  A  P  E  V  Q  H  A  A  T  V  A  P  R  M  D  A  S  L  E  I  G  T  F  P  R  L  T  T  G  P  V  M  T  N  D  Q  H  E  L  F  S  K  F  L  N  L  K  P  P  V  F  K  G  A  E  S  K  D  A  Y  D  F  L  V  D  C  H  E  L  L  H  K  M  G  I  V  E  R  F  G  V  K  F  V  T  Y  Q  F  Q  G  N  A  K  M  W  *  R  S  H  V  E  F  Q  P  T  E  A  P  P  M  T  W  A  S  F  </second_frame>
            <third_frame>   L  A  H  L  I  L  G  R  *  L  P  H  Q  L  K  K  *  *  E  K  G  R  M  G  K  M  N  K  C  G  M  R  N  C  H  P  N  L  P  Q  K  *  S  I  R  F  L  L  I  L  A  G  Y  L  I  K  A  R  H  L  Q  C  F  L  H  Q  H  L  R  L  R  R  Y  N  M  R  L  L  W  L  P  A  W  M  P  H  W  K  *  A  H  F  L  V  *  L  Q  G  L  *  *  Q  M  I  S  M  N  F  S  V  S  S  *  I  *  N  L  Q  S  S  R  V  L  N  R  R  M  L  M  I  F  W  L  I  V  T  S  Y  Y  T  R  W  V  *  *  N  G  L  V  *  S  L  *  L  I  S  F  K  G  T  P  K  C  G  S  G  H  M  L  S  F  N  Q  Q  R  H  H  L  *  L  G  P  H  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0028J09.2" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15306" stop="15800"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>492</number_coding_nucleotides>
                  <number_encoded_amino_acids>164</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PSPSDTRAVTPPPTEEVIREGEDGENEQVWNEELPPQPTPEMINQVLAYLSGLSDQGQTPPVFSAPAPQAPEVQHAATVAPRMDASLEIGTFPRLTTGPVMTNDQHELFSKFLNLKPPVFKGAESKDAYDFLVDCHELLHKMGIVERFGVKFVTYQFQGNAKMW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="15987" PGL_stop="15309"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="15987" e_stop="15309"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.907"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.907">
            <gDNA_exon_boundary e_start="15987" e_stop="15309" e_length="679"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15987" stop="15309"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356614" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15987" stop="15362"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352401" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATCTGGATAGTGCACGAAATTTAGCCTCATATGCATTGACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTCCATGGGATATACTTCTCCATAAACGAGCTAGAAAATGAGGCCCAAGTCATAGGTGGTGCCTCTGTTGGTTGAAACTCAACATGTGACCGCTACCACATTTTGGCGTTCCCTTGAAACTGATAAGTCACAAACTTCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAATCAACCAGAAAATCATAAGCATCCTTCGATTCAGCACCCTTGAAGACTGGAGGTTTCAAATTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTACAGGCCCTGTAGTCAGACGAGGAAATGTGCCTATTTCCAATGAGGCATCCATGCGGGGAGCCACAGTAGCCGCATGTTGTACCTCCGGAGCCTGAGGTGCTGGTGCAGAAAACACTGGAGGTGTCTGGCCTTGATCAGATAACCCGCTAAGATAAGCAAGAACCTGATTGATCATTTCTGGGGTAGGTTGGGGTGGCAATTCCTCATTCCACACTTGTTCATTTTCCCCATCCTCCCCTTCTCTTATTACTTCTTCAGTTGGTGGGGGAGTCACCGCCCTAGTATCAGATGGGCT</gDNA_template>
            <first_frame> I  W  I  V  H  E  I  *  P  H  M  H  *  P  T  S  Y  L  A  L  G  S  R  T  H  P  F  S  Y  P  S  K  S  M  G  Y  T  S  P  *  T  S  *  K  M  R  P  K  S  *  V  V  P  L  L  V  E  T  Q  H  V  T  A  T  T  F  W  R  S  L  E  T  D  K  S  Q  T  S  H  Q  T  V  L  L  Y  P  S  C  V  V  A  R  D  N  Q  P  E  N  H  K  H  P  S  I  Q  H  P  *  R  L  E  V  S  N  S  R  T  Y  *  K  V  H  A  D  H  L  S  L  Q  A  L  *  S  D  E  E  M  C  L  F  P  M  R  H  P  C  G  E  P  Q  *  P  H  V  V  P  P  E  P  E  V  L  V  Q  K  T  L  E  V  S  G  L  D  Q  I  T  R  *  D  K  Q  E  P  D  *  S  F  L  G  *  V  G  V  A  I  P  H  S  T  L  V  H  F  P  H  P  P  L  L  L  L  L  L  Q  L  V  G  E  S  P  P  *  Y  Q  M  G  </first_frame>
            <second_frame>  S  G  *  C  T  K  F  S  L  I  C  I  D  R  H  P  T  L  L  *  A  Q  E  L  I  P  F  P  I  P  Q  S  P  W  D  I  L  L  H  K  R  A  R  K  *  G  P  S  H  R  W  C  L  C  W  L  K  L  N  M  *  P  L  P  H  F  G  V  P  L  K  L  I  S  H  K  L  H  T  K  P  F  Y  Y  T  H  L  V  *  *  L  V  T  I  N  Q  K  I  I  S  I  L  R  F  S  T  L  E  D  W  R  F  Q  I  Q  E  L  T  E  K  F  M  L  I  I  C  H  Y  R  P  C  S  Q  T  R  K  C  A  Y  F  Q  *  G  I  H  A  G  S  H  S  S  R  M  L  Y  L  R  S  L  R  C  W  C  R  K  H  W  R  C  L  A  L  I  R  *  P  A  K  I  S  K  N  L  I  D  H  F  W  G  R  L  G  W  Q  F  L  I  P  H  L  F  I  F  P  I  L  P  F  S  Y  Y  F  F  S  W  W  G  S  H  R  P  S  I  R  W  A </second_frame>
            <third_frame>   L  D  S  A  R  N  L  A  S  Y  A  L  T  D  I  L  P  C  S  R  L  K  N  S  S  L  F  L  S  L  K  V  H  G  I  Y  F  S  I  N  E  L  E  N  E  A  Q  V  I  G  G  A  S  V  G  *  N  S  T  C  D  R  Y  H  I  L  A  F  P  *  N  *  *  V  T  N  F  T  P  N  R  S  T  I  P  I  L  C  S  S  S  *  Q  S  T  R  K  S  *  A  S  F  D  S  A  P  L  K  T  G  G  F  K  F  K  N  L  L  K  S  S  C  *  S  F  V  I  T  G  P  V  V  R  R  G  N  V  P  I  S  N  E  A  S  M  R  G  A  T  V  A  A  C  C  T  S  G  A  *  G  A  G  A  E  N  T  G  G  V  W  P  *  S  D  N  P  L  R  *  A  R  T  *  L  I  I  S  G  V  G  W  G  G  N  S  S  F  H  T  C  S  F  S  P  S  S  P  S  L  I  T  S  S  V  G  G  G  V  T  A  L  V  S  D  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0028J09.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="16785" PGL_stop="16034"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="16785" e_stop="16034"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.919"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.919">
            <gDNA_exon_boundary e_start="16785" e_stop="16034" e_length="752"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16785" stop="16072"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379315" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16785" stop="16189"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16785" stop="16259"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204434" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16714" stop="16034"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368762" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16714" stop="16355"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240817" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAATCCCTTGACAAATCGACGGTAATAACTAGCTAAACCAACAAAGCTCCTTATTTCTGACACATTAGTGGGTCTTGTCCAACTCTTTACTGTCTCAATCTTAGAAGGATCAACCATCACTCCATCCTTAGAAACCACGTGTCCCAAGAAGGACACTGCATCTAGCCCAAAACTCACACTTAGAGAATTTGGCATAAAGCTTTTTCTCCCTCAACGTTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTTCTTGCTCTTTGAGTATACCAATATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAAAGCAGCAGGGGCATTCGTAAGACCAAAAGACATTACTACAAATTCGTAATGCCCATACCTTGTTCGAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATCTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACACGAACCTTGTAACTAATCGAACAAATCATCAATGCGAGGAAGAGGATACTTGTTTTTTATGGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTCACAAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGTTCAACAACTCTTGAAGTTGGGCTTTTAACTCTTTTAACTCCGTGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTA</gDNA_template>
            <first_frame> E  S  L  D  K  S  T  V  I  T  S  *  T  N  K  A  P  Y  F  *  H  I  S  G  S  C  P  T  L  Y  C  L  N  L  R  R  I  N  H  H  S  I  L  R  N  H  V  S  Q  E  G  H  C  I  *  P  K  T  H  T  *  R  I  W  H  K  A  F  S  P  S  T  F  P  I  P  F  S  N  A  L  H  V  P  S  C  S  L  S  I  P  I  Y  H  Q  *  I  R  S  Q  R  D  P  N  M  A  *  K  S  R  S  S  S  S  *  K  Q  Q  G  H  S  *  D  Q  K  T  L  L  Q  I  R  N  A  H  T  L  F  E  K  Q  S  L  A  H  P  L  P  V  S  S  I  D  D  N  R  I  S  S  Q  S  *  R  R  H  T  N  L  V  T  N  R  T  N  H  Q  C  E  E  E  D  T  C  F  L  W  L  P  C  S  T  A  G  S  L  C  T  S  E  N  S  H  P  S  S  S  Q  T  K  P  E  H  P  K  E  M  H  L  V  *  *  S  L  C  S  T  T  L  E  V  G  L  L  T  L  L  T  P  W  E  P  F  Y  K  G  V  *  K  W  G  E   </first_frame>
            <second_frame>  N  P  L  T  N  R  R  *  *  L  A  K  P  T  K  L  L  I  S  D  T  L  V  G  L  V  Q  L  F  T  V  S  I  L  E  G  S  T  I  T  P  S  L  E  T  T  C  P  K  K  D  T  A  S  S  P  K  L  T  L  R  E  F  G  I  K  L  F  L  P  Q  R  F  Q  Y  H  S  Q  M  L  F  M  F  L  L  A  L  *  V  Y  Q  Y  I  I  N  K  Y  D  H  K  E  I  Q  I  W  L  K  N  P  V  H  Q  A  H  E  S  S  R  G  I  R  K  T  K  R  H  Y  Y  K  F  V  M  P  I  P  C  S  K  S  S  L  W  H  I  R  C  P  Y  L  Q  L  M  I  T  G  S  Q  V  N  L  R  E  D  T  R  T  L  *  L  I  E  Q  I  I  N  A  R  K  R  I  L  V  F  Y  G  Y  L  V  Q  L  P  V  V  Y  A  H  P  K  T  P  I  L  L  L  H  K  Q  N  R  S  T  P  R  R  C  T  W  S  N  E  A  F  V  Q  Q  L  L  K  L  G  F  *  L  F  *  L  R  G  S  H  S  I  R  G  Y  R  N  G  A  S  </second_frame>
            <third_frame>   I  P  *  Q  I  D  G  N  N  *  L  N  Q  Q  S  S  L  F  L  T  H  *  W  V  L  S  N  S  L  L  S  Q  S  *  K  D  Q  P  S  L  H  P  *  K  P  R  V  P  R  R  T  L  H  L  A  Q  N  S  H  L  E  N  L  A  *  S  F  F  S  L  N  V  S  N  T  I  L  K  C  S  S  C  S  F  L  L  F  E  Y  T  N  I  S  S  I  N  T  I  T  K  R  S  K  Y  G  L  K  I  P  F  I  K  L  M  K  A  A  G  A  F  V  R  P  K  D  I  T  T  N  S  *  C  P  Y  L  V  R  K  A  V  F  G  T  S  V  A  R  I  F  N  *  *  *  P  D  L  K  S  I  L  E  K  T  H  E  P  C  N  *  S  N  K  S  S  M  R  G  R  G  Y  L  F  F  M  V  T  L  F  N  C  R  *  S  M  H  I  R  K  L  P  S  F  F  F  T  N  K  T  G  A  P  Q  G  D  A  L  G  L  M  K  P  L  F  N  N  S  *  S  W  A  F  N  S  F  N  S  V  G  A  I  L  *  G  G  I  E  M  G  R  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0028J09.2" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16520" stop="16281"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VYQYIINKYDHKEIQIWLKNPVHQAHESSRGIRKTKRHYYKFVMPIPCSKSSLWHIRCPYLQLMITGSQVNLREDTRTL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0028J09.2" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16757" stop="16521"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LAKPTKLLISDTLVGLVQLFTVSILEGSTITPSLETTCPKKDTASSPKLTLREFGIKLFLPQRFQYHSQMLFMFLLAL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0028J09.2" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16588" stop="16391"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFFSLNVSNTILKCSSCSFLLFEYTNISSINTITKRSKYGLKIPFIKLMKAAGAFVRPKDITTNS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="18266" PGL_stop="18090"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="18266" e_stop="18090"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.955"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.955">
            <gDNA_exon_boundary e_start="18266" e_stop="18090" e_length="177"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18266" stop="18090"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577888" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTACATCTCCTACCATACAATGCTTCAAATGGAGCCATATCAATGCTTGAGTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAAGAAGTTATCCCAATGGCCACCAAATTCTATTACACACGCACGAAGCATATCCTCCAACACTTGAATCGTTCGCTCAGACTGGCCATCG</gDNA_template>
            <first_frame> L  H  L  L  P  Y  N  A  S  N  G  A  I  S  M  L  E  *  *  L  L  L  Y  E  N  S  A  K  G  K  K  L  S  Q  W  P  P  N  S  I  T  H  A  R  S  I  S  S  N  T  *  I  V  R  S  D  W  P  S </first_frame>
            <second_frame>  Y  I  S  Y  H  T  M  L  Q  M  E  P  Y  Q  C  L  S  D  S  Y  Y  C  M  K  T  P  L  R  V  R  S  Y  P  N  G  H  Q  I  L  L  H  T  H  E  A  Y  P  P  T  L  E  S  F  A  Q  T  G  H   </second_frame>
            <third_frame>   T  S  P  T  I  Q  C  F  K  W  S  H  I  N  A  *  V  I  A  I  I  V  *  K  L  R  *  G  *  E  V  I  P  M  A  T  K  F  Y  Y  T  R  T  K  H  I  L  Q  H  L  N  R  S  L  R  L  A  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0028J09.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="46844" PGL_stop="47638"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="46844" e_stop="47638"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.925"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.925">
            <gDNA_exon_boundary e_start="46844" e_stop="47638" e_length="795"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46844" stop="47584"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707410" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46903" stop="47638"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355122" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46903" stop="47598"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350936" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46903" stop="47597"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353644" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGATTTGATACGGGTGCCACCTCACGAACTTAATGCTATGAGTTCACCTTGGCCATTTGTAGCTTGGGGAATGGATGTCATCGGTCCTATAGAGCCAGCCGCTTCTAATGGACACAGATTCATTTTGGTTGCCATCGATTATTTCACCAAGTGGGTGGAAGCAGCCTCTTACAAATCGGTAACCAAGAAAGTGGTGGCCGACTTTGTCCGCAACAATCTGATCTGCCGATTTGGAGTTCCAGAATCCATCATCACTGATAACGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGAACAATTTAAGATTATTCACCGAAGGTCAACTGCTTATCGTCCTCAAATGAACGGAGCTGTAGAGGCCGCCAACAAGAACATCAAGAAGATTCTGAGGAAAATGATTGACAAGCAGCGGGGTTGGCATGAAATATTGCCATATGCTCTACTGGGTTATCGAACGACGGTTAGAACATCAACTGGGGCTACTCCATACTTGCTAGTATACAGAACAGAAGCAGTCGTACCTGTTGTAGTCGAGATACCTTCACTGAGGATCATCCAAGAAGCTGAGCTAAGTAATGCTGAGTGGGTTAGCAAACAGATTGATCAACTAGCCTTGATTGATGAGAAGAGAATGGTCGCCGTTTGCCATGGCCAGTTGTATAGACAGAGAATGACTCGCGCTTTTCACAAAAGAGTAAGAGCCAGAAATTTTGAAGTTGGTCAGTTGGTTCTTAAGCGTATTTTTCCTCATCAAGACGAGCAAAAAGGAAAGTTCGCACCAAACTG</gDNA_template>
            <first_frame> R  F  D  T  G  A  T  S  R  T  *  C  Y  E  F  T  L  A  I  C  S  L  G  N  G  C  H  R  S  Y  R  A  S  R  F  *  W  T  Q  I  H  F  G  C  H  R  L  F  H  Q  V  G  G  S  S  L  L  Q  I  G  N  Q  E  S  G  G  R  L  C  P  Q  Q  S  D  L  P  I  W  S  S  R  I  H  H  H  *  *  R  C  K  S  Q  Q  S  S  D  E  R  D  M  *  T  I  *  D  Y  S  P  K  V  N  C  L  S  S  S  N  E  R  S  C  R  G  R  Q  Q  E  H  Q  E  D  S  E  E  N  D  *  Q  A  A  G  L  A  *  N  I  A  I  C  S  T  G  L  S  N  D  G  *  N  I  N  W  G  Y  S  I  L  A  S  I  Q  N  R  S  S  R  T  C  C  S  R  D  T  F  T  E  D  H  P  R  S  *  A  K  *  C  *  V  G  *  Q  T  D  *  S  T  S  L  D  *  *  E  E  N  G  R  R  L  P  W  P  V  V  *  T  E  N  D  S  R  F  S  Q  K  S  K  S  Q  K  F  *  S  W  S  V  G  S  *  A  Y  F  S  S  S  R  R  A  K  R  K  V  R  T  K  L </first_frame>
            <second_frame>  D  L  I  R  V  P  P  H  E  L  N  A  M  S  S  P  W  P  F  V  A  W  G  M  D  V  I  G  P  I  E  P  A  A  S  N  G  H  R  F  I  L  V  A  I  D  Y  F  T  K  W  V  E  A  A  S  Y  K  S  V  T  K  K  V  V  A  D  F  V  R  N  N  L  I  C  R  F  G  V  P  E  S  I  I  T  D  N  G  A  N  L  N  S  H  L  M  K  E  I  C  E  Q  F  K  I  I  H  R  R  S  T  A  Y  R  P  Q  M  N  G  A  V  E  A  A  N  K  N  I  K  K  I  L  R  K  M  I  D  K  Q  R  G  W  H  E  I  L  P  Y  A  L  L  G  Y  R  T  T  V  R  T  S  T  G  A  T  P  Y  L  L  V  Y  R  T  E  A  V  V  P  V  V  V  E  I  P  S  L  R  I  I  Q  E  A  E  L  S  N  A  E  W  V  S  K  Q  I  D  Q  L  A  L  I  D  E  K  R  M  V  A  V  C  H  G  Q  L  Y  R  Q  R  M  T  R  A  F  H  K  R  V  R  A  R  N  F  E  V  G  Q  L  V  L  K  R  I  F  P  H  Q  D  E  Q  K  G  K  F  A  P  N   </second_frame>
            <third_frame>   I  *  Y  G  C  H  L  T  N  L  M  L  *  V  H  L  G  H  L  *  L  G  E  W  M  S  S  V  L  *  S  Q  P  L  L  M  D  T  D  S  F  W  L  P  S  I  I  S  P  S  G  W  K  Q  P  L  T  N  R  *  P  R  K  W  W  P  T  L  S  A  T  I  *  S  A  D  L  E  F  Q  N  P  S  S  L  I  T  V  Q  I  S  T  V  I  *  *  K  R  Y  V  N  N  L  R  L  F  T  E  G  Q  L  L  I  V  L  K  *  T  E  L  *  R  P  P  T  R  T  S  R  R  F  *  G  K  *  L  T  S  S  G  V  G  M  K  Y  C  H  M  L  Y  W  V  I  E  R  R  L  E  H  Q  L  G  L  L  H  T  C  *  Y  T  E  Q  K  Q  S  Y  L  L  *  S  R  Y  L  H  *  G  S  S  K  K  L  S  *  V  M  L  S  G  L  A  N  R  L  I  N  *  P  *  L  M  R  R  E  W  S  P  F  A  M  A  S  C  I  D  R  E  *  L  A  L  F  T  K  E  *  E  P  E  I  L  K  L  V  S  W  F  L  S  V  F  F  L  I  K  T  S  K  K  E  S  S  H  Q  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0028J09.2" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="46845" stop="47636"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>792</number_coding_nucleotides>
                  <number_encoded_amino_acids>264</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DLIRVPPHELNAMSSPWPFVAWGMDVIGPIEPAASNGHRFILVAIDYFTKWVEAASYKSVTKKVVADFVRNNLICRFGVPESIITDNGANLNSHLMKEICEQFKIIHRRSTAYRPQMNGAVEAANKNIKKILRKMIDKQRGWHEILPYALLGYRTTVRTSTGATPYLLVYRTEAVVPVVVEIPSLRIIQEAELSNAEWVSKQIDQLALIDEKRMVAVCHGQLYRQRMTRAFHKRVRARNFEVGQLVLKRIFPHQDEQKGKFAPN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="70818" PGL_stop="71106"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="70818" e_stop="71106"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="70818" e_stop="71106" e_length="289"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70818" stop="71106"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313393" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCAAAACTCACAATTTCGCCAACCACTCATTTTATTTCTTCATAAAAACCCTAAAAACACAATCGAACCCCAAAAATTGGTGTTGAAAGGAAGAGTAACGATTTGGTTTTGAATTCAAGTTCAAATTCAGAGCATGGGGTGAAGAAGATTAGAAGAAGAAGATATACAGGTGACGAATTTCGTGATGGAGTGGGATAGCAATTCGGATTTGAGTGGAGAAGAAGAAGATGGCGTTATTGAAGAAGAAGAAGTTGAGGATGAATTAGAGGAACTAGGGTTTATGTTGAGT</gDNA_template>
            <first_frame> S  K  L  T  I  S  P  T  T  H  F  I  S  S  *  K  P  *  K  H  N  R  T  P  K  I  G  V  E  R  K  S  N  D  L  V  L  N  S  S  S  N  S  E  H  G  V  K  K  I  R  R  R  R  Y  T  G  D  E  F  R  D  G  V  G  *  Q  F  G  F  E  W  R  R  R  R  W  R  Y  *  R  R  R  S  *  G  *  I  R  G  T  R  V  Y  V  E  </first_frame>
            <second_frame>  Q  N  S  Q  F  R  Q  P  L  I  L  F  L  H  K  N  P  K  N  T  I  E  P  Q  K  L  V  L  K  G  R  V  T  I  W  F  *  I  Q  V  Q  I  Q  S  M  G  *  R  R  L  E  E  E  D  I  Q  V  T  N  F  V  M  E  W  D  S  N  S  D  L  S  G  E  E  E  D  G  V  I  E  E  E  E  V  E  D  E  L  E  E  L  G  F  M  L  S </second_frame>
            <third_frame>   K  T  H  N  F  A  N  H  S  F  Y  F  F  I  K  T  L  K  T  Q  S  N  P  K  N  W  C  *  K  E  E  *  R  F  G  F  E  F  K  F  K  F  R  A  W  G  E  E  D  *  K  K  K  I  Y  R  *  R  I  S  *  W  S  G  I  A  I  R  I  *  V  E  K  K  K  M  A  L  L  K  K  K  K  L  R  M  N  *  R  N  *  G  L  C  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0028J09.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="85145" PGL_stop="86553"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="85145" e_stop="86553"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="85145" e_stop="86553" e_length="1409"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85145" stop="85741"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249770" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85326" stop="86222"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E727196" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85744" stop="86225"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545129" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85745" stop="86305"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309780" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86055" stop="86553"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549156" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAATTAACTACTCTTGAAGCAGCAGCTTGGAGGAAGCTAACTGTTGGAGGTACTGTTGAACCTTCTCGTTGCAACTTCAGTGCATGTGCAGTAGGGAACCGTGTTGTACTCTTTGGTGGAGAGGGGGTAAACATGCAACCGATGAATGATACTTTTGTATTAGACTTGAATTCCAGCAATCCAGAGTGGAAACATGTCAAAGTTAGTTCTCCTCCTCCTGGACGTTGGGGGCACACACTCTCTTGTGTGAATGGATCTCATCTTGTTGTGTTTGGTGGATATGGAAGGCAGGGTCTCTTGAATGACGTCTTTGTGCTGGATTTGGATGCCAAACAACCAACATGGCGTGAAATCTCTAGCTTGGCGCCTCCGCTTCCAAGATCTTGGCACAGCTCCTGTACTTTGGATGGGACCAAGTTGATAGTCTCTGGTGGTTGTACAGATTCTGGTGTACTTCTCAGTGATACTTTCCTGCTTGATCTGTCTATAGAGAAGCCTGTGTGGCGTGAAATAGCAGTGACGTGGACTCCACCTTCTCGTTTGGGCCACACGCTGTCTGTTTATGGAGGCAGGAAAATTCTTATGTTTGGGGGTCTTGCCAAGAGTGGTCCTGTGCGTTTTCGATCAAGTGATGTGTTTACCTTGGATCTGAGTGAGGAAGAACCCTGCTGGAGATGTGTTACAGGAAGTGGAATGCCTGGTGCGGGAAATCCTGGAGGTCTTGCTCCTTCCCCAAGGCTTGATCATGTGGCATTAAGTCTCCCTGGTGGCAGAGTTCTGGTCTTTGGTGGGTCCATTACTTCTGGTCTCCACTCAGGATCACAGCTCTACATTTTGGATCCAACTGAAGAGAAGCCAACATGGAGGATATTGAATGTGACTGGTCGGGCTCCAAGTATTGCTTGGGGACATAATACATGTGTTGTTGGCGGAACTAGAGCAATAGTCATCGGAGGTCAAACTGGGGAAGACTGGATGCTCGGTGAGTTGCATGAACTCTCTTTAGCAAGCTCTGTTGTTGTATGAATAAAAGAAAGGTAATAATCAAGAGAAGGTGTTGTACTGAAAATTTTGCCTCAAGAATTAAGGAATTCCCGAGCAAACTATTGCAGTGCGGTTTTGGCATTGCACCAAATGCATAGTTGATTAGCTTGTTTATTCTTGTATGGTCCTGTTGAGAGCTTAATTTTGCAAGGTTTGCATGGAATGATTTCGCTTGATGCACTTGAATATTCACCCACCTAGGTGTAGAGCTTGATAGATGAGTAGGTTATTATTATTATTATTATTATTATGTATTCTTAGGTTAGTTTGTATCGTGTATGGATATGTGTGTTGTTCAAGCCCTGTAATTTGAACCCCTTTGGGAGAATGAATATGTAAAAATAGAAAAAGTAAAGGAAAAAAAG</gDNA_template>
            <first_frame> E  L  T  T  L  E  A  A  A  W  R  K  L  T  V  G  G  T  V  E  P  S  R  C  N  F  S  A  C  A  V  G  N  R  V  V  L  F  G  G  E  G  V  N  M  Q  P  M  N  D  T  F  V  L  D  L  N  S  S  N  P  E  W  K  H  V  K  V  S  S  P  P  P  G  R  W  G  H  T  L  S  C  V  N  G  S  H  L  V  V  F  G  G  Y  G  R  Q  G  L  L  N  D  V  F  V  L  D  L  D  A  K  Q  P  T  W  R  E  I  S  S  L  A  P  P  L  P  R  S  W  H  S  S  C  T  L  D  G  T  K  L  I  V  S  G  G  C  T  D  S  G  V  L  L  S  D  T  F  L  L  D  L  S  I  E  K  P  V  W  R  E  I  A  V  T  W  T  P  P  S  R  L  G  H  T  L  S  V  Y  G  G  R  K  I  L  M  F  G  G  L  A  K  S  G  P  V  R  F  R  S  S  D  V  F  T  L  D  L  S  E  E  E  P  C  W  R  C  V  T  G  S  G  M  P  G  A  G  N  P  G  G  L  A  P  S  P  R  L  D  H  V  A  L  S  L  P  G  G  R  V  L  V  F  G  G  S  I  T  S  G  L  H  S  G  S  Q  L  Y  I  L  D  P  T  E  E  K  P  T  W  R  I  L  N  V  T  G  R  A  P  S  I  A  W  G  H  N  T  C  V  V  G  G  T  R  A  I  V  I  G  G  Q  T  G  E  D  W  M  L  G  E  L  H  E  L  S  L  A  S  S  V  V  V  *  I  K  E  R  *  *  S  R  E  G  V  V  L  K  I  L  P  Q  E  L  R  N  S  R  A  N  Y  C  S  A  V  L  A  L  H  Q  M  H  S  *  L  A  C  L  F  L  Y  G  P  V  E  S  L  I  L  Q  G  L  H  G  M  I  S  L  D  A  L  E  Y  S  P  T  *  V  *  S  L  I  D  E  *  V  I  I  I  I  I  I  I  M  Y  S  *  V  S  L  Y  R  V  W  I  C  V  L  F  K  P  C  N  L  N  P  F  G  R  M  N  M  *  K  *  K  K  *  R  K  K   </first_frame>
            <second_frame>  N  *  L  L  L  K  Q  Q  L  G  G  S  *  L  L  E  V  L  L  N  L  L  V  A  T  S  V  H  V  Q  *  G  T  V  L  Y  S  L  V  E  R  G  *  T  C  N  R  *  M  I  L  L  Y  *  T  *  I  P  A  I  Q  S  G  N  M  S  K  L  V  L  L  L  L  D  V  G  G  T  H  S  L  V  *  M  D  L  I  L  L  C  L  V  D  M  E  G  R  V  S  *  M  T  S  L  C  W  I  W  M  P  N  N  Q  H  G  V  K  S  L  A  W  R  L  R  F  Q  D  L  G  T  A  P  V  L  W  M  G  P  S  *  *  S  L  V  V  V  Q  I  L  V  Y  F  S  V  I  L  S  C  L  I  C  L  *  R  S  L  C  G  V  K  *  Q  *  R  G  L  H  L  L  V  W  A  T  R  C  L  F  M  E  A  G  K  F  L  C  L  G  V  L  P  R  V  V  L  C  V  F  D  Q  V  M  C  L  P  W  I  *  V  R  K  N  P  A  G  D  V  L  Q  E  V  E  C  L  V  R  E  I  L  E  V  L  L  L  P  Q  G  L  I  M  W  H  *  V  S  L  V  A  E  F  W  S  L  V  G  P  L  L  L  V  S  T  Q  D  H  S  S  T  F  W  I  Q  L  K  R  S  Q  H  G  G  Y  *  M  *  L  V  G  L  Q  V  L  L  G  D  I  I  H  V  L  L  A  E  L  E  Q  *  S  S  E  V  K  L  G  K  T  G  C  S  V  S  C  M  N  S  L  *  Q  A  L  L  L  Y  E  *  K  K  G  N  N  Q  E  K  V  L  Y  *  K  F  C  L  K  N  *  G  I  P  E  Q  T  I  A  V  R  F  W  H  C  T  K  C  I  V  D  *  L  V  Y  S  C  M  V  L  L  R  A  *  F  C  K  V  C  M  E  *  F  R  L  M  H  L  N  I  H  P  P  R  C  R  A  *  *  M  S  R  L  L  L  L  L  L  L  L  C  I  L  R  L  V  C  I  V  Y  G  Y  V  C  C  S  S  P  V  I  *  T  P  L  G  E  *  I  C  K  N  R  K  S  K  G  K  K  </second_frame>
            <third_frame>   I  N  Y  S  *  S  S  S  L  E  E  A  N  C  W  R  Y  C  *  T  F  S  L  Q  L  Q  C  M  C  S  R  E  P  C  C  T  L  W  W  R  G  G  K  H  A  T  D  E  *  Y  F  C  I  R  L  E  F  Q  Q  S  R  V  E  T  C  Q  S  *  F  S  S  S  W  T  L  G  A  H  T  L  L  C  E  W  I  S  S  C  C  V  W  W  I  W  K  A  G  S  L  E  *  R  L  C  A  G  F  G  C  Q  T  T  N  M  A  *  N  L  *  L  G  A  S  A  S  K  I  L  A  Q  L  L  Y  F  G  W  D  Q  V  D  S  L  W  W  L  Y  R  F  W  C  T  S  Q  *  Y  F  P  A  *  S  V  Y  R  E  A  C  V  A  *  N  S  S  D  V  D  S  T  F  S  F  G  P  H  A  V  C  L  W  R  Q  E  N  S  Y  V  W  G  S  C  Q  E  W  S  C  A  F  S  I  K  *  C  V  Y  L  G  S  E  *  G  R  T  L  L  E  M  C  Y  R  K  W  N  A  W  C  G  K  S  W  R  S  C  S  F  P  K  A  *  S  C  G  I  K  S  P  W  W  Q  S  S  G  L  W  W  V  H  Y  F  W  S  P  L  R  I  T  A  L  H  F  G  S  N  *  R  E  A  N  M  E  D  I  E  C  D  W  S  G  S  K  Y  C  L  G  T  *  Y  M  C  C  W  R  N  *  S  N  S  H  R  R  S  N  W  G  R  L  D  A  R  *  V  A  *  T  L  F  S  K  L  C  C  C  M  N  K  R  K  V  I  I  K  R  R  C  C  T  E  N  F  A  S  R  I  K  E  F  P  S  K  L  L  Q  C  G  F  G  I  A  P  N  A  *  L  I  S  L  F  I  L  V  W  S  C  *  E  L  N  F  A  R  F  A  W  N  D  F  A  *  C  T  *  I  F  T  H  L  G  V  E  L  D  R  *  V  G  Y  Y  Y  Y  Y  Y  Y  Y  V  F  L  G  *  F  V  S  C  M  D  M  C  V  V  Q  A  L  *  F  E  P  L  W  E  N  E  Y  V  K  I  E  K  V  K  E  K  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0028J09.2" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85145" stop="86170"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1023</number_coding_nucleotides>
                  <number_encoded_amino_acids>341</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ELTTLEAAAWRKLTVGGTVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNSSNPEWKHVKVSSPPPGRWGHTLSCVNGSHLVVFGGYGRQGLLNDVFVLDLDAKQPTWREISSLAPPLPRSWHSSCTLDGTKLIVSGGCTDSGVLLSDTFLLDLSIEKPVWREIAVTWTPPSRLGHTLSVYGGRKILMFGGLAKSGPVRFRSSDVFTLDLSEEEPCWRCVTGSGMPGAGNPGGLAPSPRLDHVALSLPGGRVLVFGGSITSGLHSGSQLYILDPTEEKPTWRILNVTGRAPSIAWGHNTCVVGGTRAIVIGGQTGEDWMLGELHELSLASSVVV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="91115" PGL_stop="89680"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="91115" e_stop="89680"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.983">
            <gDNA_exon_boundary e_start="91115" e_stop="89680" e_length="1436"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91115" stop="90781"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264697" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91114" stop="90723"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258683" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90929" stop="90370"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448877" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90909" stop="90182"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E408661" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90877" stop="89981"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E735850" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90630" stop="89894"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345141" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90619" stop="90035"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276938" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90618" stop="90088"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274472" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90425" stop="89691"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350196" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90243" stop="89680"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267705" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCAATGTGTGGTAATAGGGGAATGCAAAAATATGTAAATCACGTTTTCCATGAGATGAAAAGCTGTGGTTTTGAGCCTGATAGAGACACATTTAATACTTTGATTCGTGCTTATGGAAGGTGTGATTCTGATTTTAATGCTGCAAAGATGTACGATGAGATGATCCAATCAGGATTCACTCCGTGTGTCACAACATACAATGCGCTTCTTAATGCCCTTGCTCGTCGAGGTGATTGGAGAGCAGCTGAATCTGTTTTCTCAGACATGAAAAGTAAGGGCTTTAAGCCCAGTGAAACTACTTACTCTTTGATGCTCCACTGCTATTCCAAGGGAGGGAACGTGAGAGGTGTGGAGAGAATCGCAAAGGAAATTTATGATGGTCATATTTTTCCTAGTTGGATGCTTTTGAGAACCCTCATTCTTGCAAATTTCAAGTGTAGATCTCTCATGGGTATGGAGAGAGCATTTCAGGAACTACAGAAAAATGGATACAGGCCAGATTTGGTCATATTTAACTCCATGCTTTCCATATTTGCAAGGAACAAGCTATATGACCGTGCTCATGAGGTGCTGCATTTAATTAGGGAGAATGGTCTGCAGCCAGATCTTGTTACATATAATAGTTTAATGGATATGTATGCTAGAGCCGGTGAATGTTGGAAAGCTGAGGAAATCCTTAATCGACTGCAGAAGAATGGAGGAAAGCCAGACCTTGTATCATATAACACTGTCATCAAAGCGTTCTGCAGACAAGGTCGTATGGAGGAGGCCATACGAGTTTTCTCCCAGATGACAGAAAAAGGAATCCGACCTTGCATTGTTACATATAATACATTTATGGCTGGATTTGCAGCTCGAGGAATGTTCTCTGAGGTAAATGAATTGATCAGTTATATGATCCAGCACAAGTGCAGACCAAATGAGCTAACATACAAGACTATTGTTGATGGTTATTGTAAAGCAAAAAGATACCAAGATGCAATGGATTTTGTGTTGAATATTAAAGAAAAAGATAACACCTTTGATGAGGAATCTTTGCAACGATTTGCTTCTCGAGTTAGGGAAAATATGGAATCATGACTTAGTAATTCCATGGGATGTCCACTCTTTGATAAACTGACGTCCAAGTTGACTAGGAGAGAGAGACGAAGTTCCTCGACTTGTTATTTTGCTTCTATGAAATTGTAGATTCCATTCACATCCTTAGTTTTAACTTGCTTTGAAGAGACTTCACACTGCGCGATGAACAAAAGAACAACATTTTGACTGTTCCTTAATGGGACCGGCTTTGTGTATCTGAGTTACTGCACTACACCAAGTTCTTAGTACTTTTGGACTTTGCAAGATGAGTTTATAAATTCAGAAAATGAATGTTACAGGTTCCTTTTGTATTATTAGTAGTTTGATATTAATATATAAGTTTCATTTCATTGCTC</gDNA_template>
            <first_frame> A  M  C  G  N  R  G  M  Q  K  Y  V  N  H  V  F  H  E  M  K  S  C  G  F  E  P  D  R  D  T  F  N  T  L  I  R  A  Y  G  R  C  D  S  D  F  N  A  A  K  M  Y  D  E  M  I  Q  S  G  F  T  P  C  V  T  T  Y  N  A  L  L  N  A  L  A  R  R  G  D  W  R  A  A  E  S  V  F  S  D  M  K  S  K  G  F  K  P  S  E  T  T  Y  S  L  M  L  H  C  Y  S  K  G  G  N  V  R  G  V  E  R  I  A  K  E  I  Y  D  G  H  I  F  P  S  W  M  L  L  R  T  L  I  L  A  N  F  K  C  R  S  L  M  G  M  E  R  A  F  Q  E  L  Q  K  N  G  Y  R  P  D  L  V  I  F  N  S  M  L  S  I  F  A  R  N  K  L  Y  D  R  A  H  E  V  L  H  L  I  R  E  N  G  L  Q  P  D  L  V  T  Y  N  S  L  M  D  M  Y  A  R  A  G  E  C  W  K  A  E  E  I  L  N  R  L  Q  K  N  G  G  K  P  D  L  V  S  Y  N  T  V  I  K  A  F  C  R  Q  G  R  M  E  E  A  I  R  V  F  S  Q  M  T  E  K  G  I  R  P  C  I  V  T  Y  N  T  F  M  A  G  F  A  A  R  G  M  F  S  E  V  N  E  L  I  S  Y  M  I  Q  H  K  C  R  P  N  E  L  T  Y  K  T  I  V  D  G  Y  C  K  A  K  R  Y  Q  D  A  M  D  F  V  L  N  I  K  E  K  D  N  T  F  D  E  E  S  L  Q  R  F  A  S  R  V  R  E  N  M  E  S  *  L  S  N  S  M  G  C  P  L  F  D  K  L  T  S  K  L  T  R  R  E  R  R  S  S  S  T  C  Y  F  A  S  M  K  L  *  I  P  F  T  S  L  V  L  T  C  F  E  E  T  S  H  C  A  M  N  K  R  T  T  F  *  L  F  L  N  G  T  G  F  V  Y  L  S  Y  C  T  T  P  S  S  *  Y  F  W  T  L  Q  D  E  F  I  N  S  E  N  E  C  Y  R  F  L  L  Y  Y  *  *  F  D  I  N  I  *  V  S  F  H  C   </first_frame>
            <second_frame>  Q  C  V  V  I  G  E  C  K  N  M  *  I  T  F  S  M  R  *  K  A  V  V  L  S  L  I  E  T  H  L  I  L  *  F  V  L  M  E  G  V  I  L  I  L  M  L  Q  R  C  T  M  R  *  S  N  Q  D  S  L  R  V  S  Q  H  T  M  R  F  L  M  P  L  L  V  E  V  I  G  E  Q  L  N  L  F  S  Q  T  *  K  V  R  A  L  S  P  V  K  L  L  T  L  *  C  S  T  A  I  P  R  E  G  T  *  E  V  W  R  E  S  Q  R  K  F  M  M  V  I  F  F  L  V  G  C  F  *  E  P  S  F  L  Q  I  S  S  V  D  L  S  W  V  W  R  E  H  F  R  N  Y  R  K  M  D  T  G  Q  I  W  S  Y  L  T  P  C  F  P  Y  L  Q  G  T  S  Y  M  T  V  L  M  R  C  C  I  *  L  G  R  M  V  C  S  Q  I  L  L  H  I  I  V  *  W  I  C  M  L  E  P  V  N  V  G  K  L  R  K  S  L  I  D  C  R  R  M  E  E  S  Q  T  L  Y  H  I  T  L  S  S  K  R  S  A  D  K  V  V  W  R  R  P  Y  E  F  S  P  R  *  Q  K  K  E  S  D  L  A  L  L  H  I  I  H  L  W  L  D  L  Q  L  E  E  C  S  L  R  *  M  N  *  S  V  I  *  S  S  T  S  A  D  Q  M  S  *  H  T  R  L  L  L  M  V  I  V  K  Q  K  D  T  K  M  Q  W  I  L  C  *  I  L  K  K  K  I  T  P  L  M  R  N  L  C  N  D  L  L  L  E  L  G  K  I  W  N  H  D  L  V  I  P  W  D  V  H  S  L  I  N  *  R  P  S  *  L  G  E  R  D  E  V  P  R  L  V  I  L  L  L  *  N  C  R  F  H  S  H  P  *  F  *  L  A  L  K  R  L  H  T  A  R  *  T  K  E  Q  H  F  D  C  S  L  M  G  P  A  L  C  I  *  V  T  A  L  H  Q  V  L  S  T  F  G  L  C  K  M  S  L  *  I  Q  K  M  N  V  T  G  S  F  C  I  I  S  S  L  I  L  I  Y  K  F  H  F  I  A  </second_frame>
            <third_frame>   N  V  W  *  *  G  N  A  K  I  C  K  S  R  F  P  *  D  E  K  L  W  F  *  A  *  *  R  H  I  *  Y  F  D  S  C  L  W  K  V  *  F  *  F  *  C  C  K  D  V  R  *  D  D  P  I  R  I  H  S  V  C  H  N  I  Q  C  A  S  *  C  P  C  S  S  R  *  L  E  S  S  *  I  C  F  L  R  H  E  K  *  G  L  *  A  Q  *  N  Y  L  L  F  D  A  P  L  L  F  Q  G  R  E  R  E  R  C  G  E  N  R  K  G  N  L  *  W  S  Y  F  S  *  L  D  A  F  E  N  P  H  S  C  K  F  Q  V  *  I  S  H  G  Y  G  E  S  I  S  G  T  T  E  K  W  I  Q  A  R  F  G  H  I  *  L  H  A  F  H  I  C  K  E  Q  A  I  *  P  C  S  *  G  A  A  F  N  *  G  E  W  S  A  A  R  S  C  Y  I  *  *  F  N  G  Y  V  C  *  S  R  *  M  L  E  S  *  G  N  P  *  S  T  A  E  E  W  R  K  A  R  P  C  I  I  *  H  C  H  Q  S  V  L  Q  T  R  S  Y  G  G  G  H  T  S  F  L  P  D  D  R  K  R  N  P  T  L  H  C  Y  I  *  Y  I  Y  G  W  I  C  S  S  R  N  V  L  *  G  K  *  I  D  Q  L  Y  D  P  A  Q  V  Q  T  K  *  A  N  I  Q  D  Y  C  *  W  L  L  *  S  K  K  I  P  R  C  N  G  F  C  V  E  Y  *  R  K  R  *  H  L  *  *  G  I  F  A  T  I  C  F  S  S  *  G  K  Y  G  I  M  T  *  *  F  H  G  M  S  T  L  *  *  T  D  V  Q  V  D  *  E  R  E  T  K  F  L  D  L  L  F  C  F  Y  E  I  V  D  S  I  H  I  L  S  F  N  L  L  *  R  D  F  T  L  R  D  E  Q  K  N  N  I  L  T  V  P  *  W  D  R  L  C  V  S  E  L  L  H  Y  T  K  F  L  V  L  L  D  F  A  R  *  V  Y  K  F  R  K  *  M  L  Q  V  P  F  V  L  L  V  V  *  Y  *  Y  I  S  F  I  S  L  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0028J09.2" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="91115" stop="90036"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1077</number_coding_nucleotides>
                  <number_encoded_amino_acids>359</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AMCGNRGMQKYVNHVFHEMKSCGFEPDRDTFNTLIRAYGRCDSDFNAAKMYDEMIQSGFTPCVTTYNALLNALARRGDWRAAESVFSDMKSKGFKPSETTYSLMLHCYSKGGNVRGVERIAKEIYDGHIFPSWMLLRTLILANFKCRSLMGMERAFQELQKNGYRPDLVIFNSMLSIFARNKLYDRAHEVLHLIRENGLQPDLVTYNSLMDMYARAGECWKAEEILNRLQKNGGKPDLVSYNTVIKAFCRQGRMEEAIRVFSQMTEKGIRPCIVTYNTFMAGFAARGMFSEVNELISYMIQHKCRPNELTYKTIVDGYCKAKRYQDAMDFVLNIKEKDNTFDEESLQRFASRVRENMES*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="-" PGL_start="92724" PGL_stop="91537"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="92724" e_stop="91537"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="92724" e_stop="91537" e_length="1188"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92724" stop="92234"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E739711" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92704" stop="91848"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E736086" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91948" stop="91537"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438593" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGTAGAGTTGGATTGGAAGTAATTGAAATGAGTGTGTGGGTGTGGTAGAATCCGCTATCTCTCAGTATAGCTTTGCCCCGTTCTTTTCTCTCAATCATTCTATCTATCATCAAAAATGCCGAATTGAGAGTCTTGTGCCACTCCAATATTATCTTCAGCCATGGAAGGTTCTCTCTTCCCTAATAGACCAATCTTGCCAATCCAATCAACAAAACCAACACCTTTACCACCAACCCAGCGCCTCAAATTGAATCCCACCACCACCACTTCCCCTCTCCCACCTCTCAAACAACAGCAGCAACAAACCCCTTCTTCTTCTACTTCTACTTCTTTCCCTCTTGATTCTCTTCTCCAACATCTTCTTCATGTTTCATCTTCAAATCCTCCAAGAACTGTTAAATCTTCAAGAATTAGCAATACCCATTTGTCTACTCTTCCTGTTTCTTTGGAAAATGATGACACCCTTTTTGGGAATACGAGGGTTACTGTTCCCAAAATGGAATCTTTTGATGATGGGTCACTTGAATTTCTCCCTCTTAACTGTAAGTTAATGATTGATTCAATTCTTGAACGCCCTCTTTCTCATATGACTGAATTCTTTGATTCTGTGAAACTTGAGTTGCTTGAAGTTGATTTGATGAGTCTTTTGAAAGGCTTAGATGTTTTAGGCAAATGGGATAGAGCTATTTTGTTGTTTGAATGGGCTGTTTTGAACATTCATGTTGAAAATGAAAAGCTAGATAGTCAAGTTATTGAATTTATGGTGAAGGTTTTGGGTAGGGAATCACAGCATTTGGTGACGTCGAAACTGTTTGATGTTATTCCATTCGAAGATTACTCTCTTGATGTCCGAGCGTGGACAACTGTTCTACATGCTTATTCTAGGATTGGCAAGTATGACAAGGCAATTGCATTGTTTGAATATGTGAAAGAGAAGGGTTTATCTGTCACTTTGGTAACTTATAATGTTATGTTAGATGTTTATGGTAAAAAGGGTAGGTCTTGGAACAATATTTTACTGCTTTTAGATGAAATGACAAGTAACGGGCTTGAATTTGACGAGTTCACTTGTAGCACGGTTATTGCTGCTTGTGGAAGGGAAGGGTTGTTGGAGGAAGCGAAAGAGTTTTTTGATGTATTGAAGAGAAAGGGTTATGTTCCGGGAACAGTTACTTACAATTCTTTACT</gDNA_template>
            <first_frame> C  R  V  G  L  E  V  I  E  M  S  V  W  V  W  *  N  P  L  S  L  S  I  A  L  P  R  S  F  L  S  I  I  L  S  I  I  K  N  A  E  L  R  V  L  C  H  S  N  I  I  F  S  H  G  R  F  S  L  P  *  *  T  N  L  A  N  P  I  N  K  T  N  T  F  T  T  N  P  A  P  Q  I  E  S  H  H  H  H  F  P  S  P  T  S  Q  T  T  A  A  T  N  P  F  F  F  Y  F  Y  F  F  P  S  *  F  S  S  P  T  S  S  S  C  F  I  F  K  S  S  K  N  C  *  I  F  K  N  *  Q  Y  P  F  V  Y  S  S  C  F  F  G  K  *  *  H  P  F  W  E  Y  E  G  Y  C  S  Q  N  G  I  F  *  *  W  V  T  *  I  S  P  S  *  L  *  V  N  D  *  F  N  S  *  T  P  S  F  S  Y  D  *  I  L  *  F  C  E  T  *  V  A  *  S  *  F  D  E  S  F  E  R  L  R  C  F  R  Q  M  G  *  S  Y  F  V  V  *  M  G  C  F  E  H  S  C  *  K  *  K  A  R  *  S  S  Y  *  I  Y  G  E  G  F  G  *  G  I  T  A  F  G  D  V  E  T  V  *  C  Y  S  I  R  R  L  L  S  *  C  P  S  V  D  N  C  S  T  C  L  F  *  D  W  Q  V  *  Q  G  N  C  I  V  *  I  C  E  R  E  G  F  I  C  H  F  G  N  L  *  C  Y  V  R  C  L  W  *  K  G  *  V  L  E  Q  Y  F  T  A  F  R  *  N  D  K  *  R  A  *  I  *  R  V  H  L  *  H  G  Y  C  C  L  W  K  G  R  V  V  G  G  S  E  R  V  F  *  C  I  E  E  K  G  L  C  S  G  N  S  Y  L  Q  F  F  T </first_frame>
            <second_frame>  V  E  L  D  W  K  *  L  K  *  V  C  G  C  G  R  I  R  Y  L  S  V  *  L  C  P  V  L  F  S  Q  S  F  Y  L  S  S  K  M  P  N  *  E  S  C  A  T  P  I  L  S  S  A  M  E  G  S  L  F  P  N  R  P  I  L  P  I  Q  S  T  K  P  T  P  L  P  P  T  Q  R  L  K  L  N  P  T  T  T  T  S  P  L  P  P  L  K  Q  Q  Q  Q  Q  T  P  S  S  S  T  S  T  S  F  P  L  D  S  L  L  Q  H  L  L  H  V  S  S  S  N  P  P  R  T  V  K  S  S  R  I  S  N  T  H  L  S  T  L  P  V  S  L  E  N  D  D  T  L  F  G  N  T  R  V  T  V  P  K  M  E  S  F  D  D  G  S  L  E  F  L  P  L  N  C  K  L  M  I  D  S  I  L  E  R  P  L  S  H  M  T  E  F  F  D  S  V  K  L  E  L  L  E  V  D  L  M  S  L  L  K  G  L  D  V  L  G  K  W  D  R  A  I  L  L  F  E  W  A  V  L  N  I  H  V  E  N  E  K  L  D  S  Q  V  I  E  F  M  V  K  V  L  G  R  E  S  Q  H  L  V  T  S  K  L  F  D  V  I  P  F  E  D  Y  S  L  D  V  R  A  W  T  T  V  L  H  A  Y  S  R  I  G  K  Y  D  K  A  I  A  L  F  E  Y  V  K  E  K  G  L  S  V  T  L  V  T  Y  N  V  M  L  D  V  Y  G  K  K  G  R  S  W  N  N  I  L  L  L  L  D  E  M  T  S  N  G  L  E  F  D  E  F  T  C  S  T  V  I  A  A  C  G  R  E  G  L  L  E  E  A  K  E  F  F  D  V  L  K  R  K  G  Y  V  P  G  T  V  T  Y  N  S  L   </second_frame>
            <third_frame>   *  S  W  I  G  S  N  *  N  E  C  V  G  V  V  E  S  A  I  S  Q  Y  S  F  A  P  F  F  S  L  N  H  S  I  Y  H  Q  K  C  R  I  E  S  L  V  P  L  Q  Y  Y  L  Q  P  W  K  V  L  S  S  L  I  D  Q  S  C  Q  S  N  Q  Q  N  Q  H  L  Y  H  Q  P  S  A  S  N  *  I  P  P  P  P  L  P  L  S  H  L  S  N  N  S  S  N  K  P  L  L  L  L  L  L  L  L  S  L  L  I  L  F  S  N  I  F  F  M  F  H  L  Q  I  L  Q  E  L  L  N  L  Q  E  L  A  I  P  I  C  L  L  F  L  F  L  W  K  M  M  T  P  F  L  G  I  R  G  L  L  F  P  K  W  N  L  L  M  M  G  H  L  N  F  S  L  L  T  V  S  *  *  L  I  Q  F  L  N  A  L  F  L  I  *  L  N  S  L  I  L  *  N  L  S  C  L  K  L  I  *  *  V  F  *  K  A  *  M  F  *  A  N  G  I  E  L  F  C  C  L  N  G  L  F  *  T  F  M  L  K  M  K  S  *  I  V  K  L  L  N  L  W  *  R  F  W  V  G  N  H  S  I  W  *  R  R  N  C  L  M  L  F  H  S  K  I  T  L  L  M  S  E  R  G  Q  L  F  Y  M  L  I  L  G  L  A  S  M  T  R  Q  L  H  C  L  N  M  *  K  R  R  V  Y  L  S  L  W  *  L  I  M  L  C  *  M  F  M  V  K  R  V  G  L  G  T  I  F  Y  C  F  *  M  K  *  Q  V  T  G  L  N  L  T  S  S  L  V  A  R  L  L  L  L  V  E  G  K  G  C  W  R  K  R  K  S  F  L  M  Y  *  R  E  R  V  M  F  R  E  Q  L  L  T  I  L  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0028J09.2" strand="-"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92597" stop="91539"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1059</number_coding_nucleotides>
                  <number_encoded_amino_acids>353</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ESCATPILSSAMEGSLFPNRPILPIQSTKPTPLPPTQRLKLNPTTTTSPLPPLKQQQQQTPSSSTSTSFPLDSLLQHLLHVSSSNPPRTVKSSRISNTHLSTLPVSLENDDTLFGNTRVTVPKMESFDDGSLEFLPLNCKLMIDSILERPLSHMTEFFDSVKLELLEVDLMSLLKGLDVLGKWDRAILLFEWAVLNIHVENEKLDSQVIEFMVKVLGRESQHLVTSKLFDVIPFEDYSLDVRAWTTVLHAYSRIGKYDKAIALFEYVKEKGLSVTLVTYNVMLDVYGKKGRSWNNILLLLDEMTSNGLEFDEFTCSTVIAACGREGLLEEAKEFFDVLKRKGYVPGTVTYNSL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="+" PGL_start="100057" PGL_stop="100772"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="100057" e_stop="100772"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.941"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.941">
            <gDNA_exon_boundary e_start="100057" e_stop="100772" e_length="716"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100057" stop="100772"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E578039" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100065" stop="100438"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577891" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGAGGGTCTTCGTTCCAAAACACTTCAACTCTTGGAATCTTAGTACTAGGATCACTTCTCTGAACTTCACGACGAACCTGCAGGAAGGACCCTCATAGCCACGACGGACCGTCACAAGCTTCGTAATCCCACACTTGGTCAGACTTCCCCATCTTCCTTCAGCAGCTACACTACGCTGCCACCTACGGACCGTCACAAGCACGACGGACCGTCATATGCTCCGTAGGTGGTCTCTTCTGCATTTCTTCGCTCAAAATCTCGGCATTCAGCTTTGGACAGATTTCCTGCAAAACAAAGAGAAACTTATATAAAAATTAGCGCAAAAAGGCTTTTGGACACACTAAACTTAAGGGAAAAGTATTAATAATACCGTGAAACCATGGTATATCAATACCCTCAACTTAAATTCGTTGTTTGTCCTCAAGCGACGCACTATGACTCACTAGACAATCTTTGTACAATAGTATCTATGTTTTATCCTTTGCAATCATTTGGCTATCAATCCCGATTAATCTCATCAAATCTATGCATGCTATCGCTATTAGGCTTGAATTTTGTGGGATCAGAACATGACACAGACTCACCACGCACTAACACCTATCCTCTTCAATTTTTCACCGGGGTACTAGCAATTCTGGTATTGCAACTAGTGTCCTCACTTTAAAACAAAATCCTCCTTTTTCACACAATGATTTCACTTTGAGTATAAGGATTAC</gDNA_template>
            <first_frame> R  G  S  S  F  Q  N  T  S  T  L  G  I  L  V  L  G  S  L  L  *  T  S  R  R  T  C  R  K  D  P  H  S  H  D  G  P  S  Q  A  S  *  S  H  T  W  S  D  F  P  I  F  L  Q  Q  L  H  Y  A  A  T  Y  G  P  S  Q  A  R  R  T  V  I  C  S  V  G  G  L  F  C  I  S  S  L  K  I  S  A  F  S  F  G  Q  I  S  C  K  T  K  R  N  L  Y  K  N  *  R  K  K  A  F  G  H  T  K  L  K  G  K  V  L  I  I  P  *  N  H  G  I  S  I  P  S  T  *  I  R  C  L  S  S  S  D  A  L  *  L  T  R  Q  S  L  Y  N  S  I  Y  V  L  S  F  A  I  I  W  L  S  I  P  I  N  L  I  K  S  M  H  A  I  A  I  R  L  E  F  C  G  I  R  T  *  H  R  L  T  T  H  *  H  L  S  S  S  I  F  H  R  G  T  S  N  S  G  I  A  T  S  V  L  T  L  K  Q  N  P  P  F  S  H  N  D  F  T  L  S  I  R  I   </first_frame>
            <second_frame>  E  G  L  R  S  K  T  L  Q  L  L  E  S  *  Y  *  D  H  F  S  E  L  H  D  E  P  A  G  R  T  L  I  A  T  T  D  R  H  K  L  R  N  P  T  L  G  Q  T  S  P  S  S  F  S  S  Y  T  T  L  P  P  T  D  R  H  K  H  D  G  P  S  Y  A  P  *  V  V  S  S  A  F  L  R  S  K  S  R  H  S  A  L  D  R  F  P  A  K  Q  R  E  T  Y  I  K  I  S  A  K  R  L  L  D  T  L  N  L  R  E  K  Y  *  *  Y  R  E  T  M  V  Y  Q  Y  P  Q  L  K  F  V  V  C  P  Q  A  T  H  Y  D  S  L  D  N  L  C  T  I  V  S  M  F  Y  P  L  Q  S  F  G  Y  Q  S  R  L  I  S  S  N  L  C  M  L  S  L  L  G  L  N  F  V  G  S  E  H  D  T  D  S  P  R  T  N  T  Y  P  L  Q  F  F  T  G  V  L  A  I  L  V  L  Q  L  V  S  S  L  *  N  K  I  L  L  F  H  T  M  I  S  L  *  V  *  G  L  </second_frame>
            <third_frame>   R  V  F  V  P  K  H  F  N  S  W  N  L  S  T  R  I  T  S  L  N  F  T  T  N  L  Q  E  G  P  S  *  P  R  R  T  V  T  S  F  V  I  P  H  L  V  R  L  P  H  L  P  S  A  A  T  L  R  C  H  L  R  T  V  T  S  T  T  D  R  H  M  L  R  R  W  S  L  L  H  F  F  A  Q  N  L  G  I  Q  L  W  T  D  F  L  Q  N  K  E  K  L  I  *  K  L  A  Q  K  G  F  W  T  H  *  T  *  G  K  S  I  N  N  T  V  K  P  W  Y  I  N  T  L  N  L  N  S  L  F  V  L  K  R  R  T  M  T  H  *  T  I  F  V  Q  *  Y  L  C  F  I  L  C  N  H  L  A  I  N  P  D  *  S  H  Q  I  Y  A  C  Y  R  Y  *  A  *  I  L  W  D  Q  N  M  T  Q  T  H  H  A  L  T  P  I  L  F  N  F  S  P  G  Y  *  Q  F  W  Y  C  N  *  C  P  H  F  K  T  K  S  S  F  F  T  Q  *  F  H  F  E  Y  K  D  Y </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0028J09.2" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="100424" stop="100720"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>294</number_coding_nucleotides>
                  <number_encoded_amino_acids>98</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YRETMVYQYPQLKFVVCPQATHYDSLDNLCTIVSMFYPLQSFGYQSRLISSNLCMLSLLGLNFVGSEHDTDSPRTNTYPLQFFTGVLAILVLQLVSSL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0028J09.2" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="100155" stop="100367"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PRRTVTSFVIPHLVRLPHLPSAATLRCHLRTVTSTTDRHMLRRWSLLHFFAQNLGIQLWTDFLQNKEKLI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="+" PGL_start="104280" PGL_stop="104868"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="104280" e_stop="104868"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.905"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.905">
            <gDNA_exon_boundary e_start="104280" e_stop="104868" e_length="589"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104280" stop="104868"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351864" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACTGCGAAGGTGTTTCTCCCTGTATCAGACTTCCTAGTACTCCAAGATTTGTTATTCCGGGAGATTTTCTCTAATTTTTTAGCGATCTCAGCATAAGGGCATTATCCATAGGATCCACCTGCTACAGTGTCCAACACCGCTTTGTTGTTATCATCCTGTCCCCGATAGAAGTATTCCTTCAGTGACTCATCATCTATACGGTGATTTGAACACTTCTCAAGAATGAGGTGAATCTATCCCAAGAACTACTAACTGACTCTCCTGGTAGTGCCACAAAGTTGTTCACTCTGTCTTTGTGGTTTAGTTTCTTGGAGACCGGATAGTAGCGTGCTAAGAAGACATTTCTTAATTGGTTCCAAGTGAAGATTAAGTTGTATGGGAGCTCAGTGAACCACATAGCAGCCTATCCCGTCAGTAAGAGAGGAAACACTCTGAGCCCTATTACATCTAGATCCAAATCAGGCCTCCCCACACAACTTTTACACACTGCCCTTACATTAGCTATATGGGCATGTGGATCCTCAGAAGGTAGCCCTAAAAACAAACCTCTGTCAGTGAGCATTTGCATCACGCTACTAGTCACCACAAA</gDNA_template>
            <first_frame> T  A  K  V  F  L  P  V  S  D  F  L  V  L  Q  D  L  L  F  R  E  I  F  S  N  F  L  A  I  S  A  *  G  H  Y  P  *  D  P  P  A  T  V  S  N  T  A  L  L  L  S  S  C  P  R  *  K  Y  S  F  S  D  S  S  S  I  R  *  F  E  H  F  S  R  M  R  *  I  Y  P  K  N  Y  *  L  T  L  L  V  V  P  Q  S  C  S  L  C  L  C  G  L  V  S  W  R  P  D  S  S  V  L  R  R  H  F  L  I  G  S  K  *  R  L  S  C  M  G  A  Q  *  T  T  *  Q  P  I  P  S  V  R  E  E  T  L  *  A  L  L  H  L  D  P  N  Q  A  S  P  H  N  F  Y  T  L  P  L  H  *  L  Y  G  H  V  D  P  Q  K  V  A  L  K  T  N  L  C  Q  *  A  F  A  S  R  Y  *  S  P  Q  </first_frame>
            <second_frame>  L  R  R  C  F  S  L  Y  Q  T  S  *  Y  S  K  I  C  Y  S  G  R  F  S  L  I  F  *  R  S  Q  H  K  G  I  I  H  R  I  H  L  L  Q  C  P  T  P  L  C  C  Y  H  P  V  P  D  R  S  I  P  S  V  T  H  H  L  Y  G  D  L  N  T  S  Q  E  *  G  E  S  I  P  R  T  T  N  *  L  S  W  *  C  H  K  V  V  H  S  V  F  V  V  *  F  L  G  D  R  I  V  A  C  *  E  D  I  S  *  L  V  P  S  E  D  *  V  V  W  E  L  S  E  P  H  S  S  L  S  R  Q  *  E  R  K  H  S  E  P  Y  Y  I  *  I  Q  I  R  P  P  H  T  T  F  T  H  C  P  Y  I  S  Y  M  G  M  W  I  L  R  R  *  P  *  K  Q  T  S  V  S  E  H  L  H  H  A  T  S  H  H  K </second_frame>
            <third_frame>   C  E  G  V  S  P  C  I  R  L  P  S  T  P  R  F  V  I  P  G  D  F  L  *  F  F  S  D  L  S  I  R  A  L  S  I  G  S  T  C  Y  S  V  Q  H  R  F  V  V  I  I  L  S  P  I  E  V  F  L  Q  *  L  I  I  Y  T  V  I  *  T  L  L  K  N  E  V  N  L  S  Q  E  L  L  T  D  S  P  G  S  A  T  K  L  F  T  L  S  L  W  F  S  F  L  E  T  G  *  *  R  A  K  K  T  F  L  N  W  F  Q  V  K  I  K  L  Y  G  S  S  V  N  H  I  A  A  Y  P  V  S  K  R  G  N  T  L  S  P  I  T  S  R  S  K  S  G  L  P  T  Q  L  L  H  T  A  L  T  L  A  I  W  A  C  G  S  S  E  G  S  P  K  N  K  P  L  S  V  S  I  C  I  T  L  L  V  T  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0028J09.2" strand="+"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="104606" stop="104866"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>261</number_coding_nucleotides>
                  <number_encoded_amino_acids>87</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RAKKTFLNWFQVKIKLYGSSVNHIAAYPVSKRGNTLSPITSRSKSGLPTQLLHTALTLAIWACGSSEGSPKNKPLSVSICITLLVTT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 306 chains have been computed
$ 
$ memory statistics:
$ 97168 bytes spliced alignments in total
$ 46 spliced alignments have been stored
$ 2112 bytes was the average size of a spliced alignment
$ 25584 bytes predicted gene locations in total
$ 18 predicted gene locations have been stored
$ 1421 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 361 backtrace matrices have been allocated
$ 
$ date finished: 2008-04-10 08:12:27
-->
