<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2008-03-23 05:57:02"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C07HBa0049C13-uzRID/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/cxgn-bacpublish-resources-fz43C4/lycopersicum_combined_unigene_seqs" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-fz43C4/lycopersicum_combined_unigene_seqs" ref_id="SGN-U327080" ref_strand="+" ref_description="SGN-U327080        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: AT3G21760.1 | Symbol: None | UDP-glucoronosyl/UDP-glucosyl transferase family protein, contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase | chr3:7667034-7668731 FORWARD | Aliases: MSD21.9 (evalue: 7e-96, score=224) genbank/nr: gi|14349253|dbj|BAB60721.1| glucosyltransferase [Nicotiana tabacum](evalue: 9e-106, score=244)">
      <seq>ctttcatcatctttgcttcatgtcttactgcggagttagtttccatcaatttacttatcccattttcgatggcttctgctgttactatagcttgatctttattcctctcgcagtaatccaaagtaatctccactgctactcctatctctttcactaattgaaacgcgttaacctgctgttctgagtgcaatggccatgtcgctataggaacaccataccataagctttcaagtatcgaattccatccacagtgtgatacgaatcccccgattgcttcgtgagacaacactttcaattgtggaacccatcctaccactttcccttttttctctgttctctttaggaatccttcaggcaaaatttctgaatagctcgtgtattctcctggaaattgagcgttgttgctctgaggtggacgacgtaaagaccataagaaacggcaaccaatgttatcgagagctatagcgatctgtttcacttgatccgttggtaaactcccctggctcccaaaacagagtagcaccaccgaattaggtggctgtttgtccagccaatttgttatttctgcctcctctgactccgactgtgatttcgattggtttaaaattggaccaattggatagatggatgggcaggggatgagcttgctcagatcttgataggttgttgttattgtatgcatccaaggcgtatacttctagttcagcaaaagtgttgatgatgattcctttggcttttctatacccacgagcaaaatcgagaaatctccctaaccatgtgtctctatcgactagaaccattggcaatacgttcgtaggaacagggtatgcgtagctaggaaatgataacagagcagtaccatcatcagagtttttgaaactggaaacatctctcgaacactcatcttcaagaaactggaaatgaatcatcaacccaagaaaagcagcaggggaagtgaaaaacacatagctcgggatcccaaactcttcagctacatccatcaatggagtgcataacatgtctacaacaaatccagcaagtttaacaccgccccgttgacttattaaaaattccctgattcgagatttttgagtttgtactaatctgttaacaaagtgtcctcgagttttagagctccattccggggttggatcaacaggtggtaattcaaagaatcgaagacgttcagaggatgatgaatcaattacagagtcgacaaaagggccactaacagggtcgatgtaatcagggagtttcataatgaggacagtgattgagagttgatgatttcgattgatgaaaagcttggccaactccaacatctgagcaacatggcccattgccggagaagggatcagaatcaattctgctaatttctccataggatcaaattgtttctttcaattcaactgctaatgtactttcactaaaatggaagaagagatgtttacaacaataaaaaaaaaaagaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0049C13-uzRID/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0049C13.2" temp_strand="-" temp_description="C07HBa0049C13.2  AC212618.2 htgs_phase:2 submitted_to_sgn_as:gi|164698548|gb|AC212618.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0049C13, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="14734" stop="12673"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14434" g_stop="12973" g_length="1462"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1464" r_length="1464" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0049C13.2" gen_strand="-" ref_id="SGN-U327080" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>1462</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0049C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U327080" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14434" e_stop="12973"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTCATCATCTTTGCTTCATGTCTTACTGCGGAGTTAGTTTCCATCAATTTACTTATCCCATTTTCGATGGCTTCTGCTGTTACTATAGCTTGATCTTTATTCCTCTCGCAGTAATCCAAAGTAATCTCCACTGCTACTCCTATCTCTTTCACTAATTGAAACGCGTTAACCTGCTGTTCTGAGTGCAATGGCCATGTCGCTATAGGAACACCATACCATAAGCTTTCAAGTATCGAATTCCATCCACAGTGTGATACGAATCCCCCGATTGCTTCGTGAGACAACACTTTCAATTGTGGAACCCATCCTACCACTTTCCCTTTTTTCTCTGTTCTCTTTAGGAATCCTTCAGGCAAAATTTCTGAATAGCTCGTGTATTCTCCTGGAAATTGAGCGTTGTTGCTCTGAGGTGGACGACGTAAAGACCATAAGAAACGGCAACCAATGTTATCGAGAGCTATAGCGATCTGTTTCACTTGATCCGTTGGTAAACTCCCCTGGCTCCCAAAACAGAGTAGCACCACCGAATTAGGTGGCTGTTTGTCCAGCCAATTTGTTATTTCTGCCTCCTCTGACTCCGACTGTGATTTCGATTGGTTTAAAATTGGACCAATTGGATAGATGGAT-GGCAGGGGATGAGCTTGCTCAGATCTTGATAGGTTGTTGTTATTGTATGCATCCAAGGCGTATACTTCTAGTTCAGCAAAAGTGTTGATGATGATTCCTTTGGCTTTTCTATACCCACGAGCAAAATCGAGAAATCTCCCTAACCATGTGTCTCTATCGACTAGAACCATTGGCAATACGTTCGTAGGAACAGGGTATGCGTAGCTAGGAAATGATAACAGAGCAGTACCATCATCAGAGTTTTTGAAACTGGAAACATCTCTCGAACACTCATCTTCAAGAAACTGGAAATGAATCATCAACCCAAGAAAAGCAGCAGGGGAAGTGAAAAACACATAGCTCGGGATCCCAAACTCTTCAGCTACATCCATCAATGGAGTGCATAACATGTCTACAACAAATCCAGCAAGTTTAACACCGCCCCGTTGACTTATTAAAAATTCCCTGATTCGAGATTTTTGAGTTTGTACTAATCTGTTAACAAAGTGTCCTCGAGTTTTAGAGCTCCATTCCGGGGTTGGATCAACAGGTGGTAATTCAAAGAATCGAAGACGTTCAGAGGATGATGAATCAATTACAGAGTCGACAAAAGGGCCACTAACAGGGTCGATGTAATCAGGGAGTTTCATAATGAGGACAGTGATTGAGAGTTGATGATTTCGATTGATGAAAAGCTTGGCCAACTCCAACATCTGAGCAACATGGCCCATTGCCGGAGAAGGGATCAGAATCAATTCTGCTAATTTCTCCATAGGATCAAATTGTTTCTTTCAATTCAACTGCTAATGTACTTTCACTAAAATGGAAGAA-AGATGTTTACAACAATACATAAA</genome_strand>
        <mrna_strand>CTTTCATCATCTTTGCTTCATGTCTTACTGCGGAGTTAGTTTCCATCAATTTACTTATCCCATTTTCGATGGCTTCTGCTGTTACTATAGCTTGATCTTTATTCCTCTCGCAGTAATCCAAAGTAATCTCCACTGCTACTCCTATCTCTTTCACTAATTGAAACGCGTTAACCTGCTGTTCTGAGTGCAATGGCCATGTCGCTATAGGAACACCATACCATAAGCTTTCAAGTATCGAATTCCATCCACAGTGTGATACGAATCCCCCGATTGCTTCGTGAGACAACACTTTCAATTGTGGAACCCATCCTACCACTTTCCCTTTTTTCTCTGTTCTCTTTAGGAATCCTTCAGGCAAAATTTCTGAATAGCTCGTGTATTCTCCTGGAAATTGAGCGTTGTTGCTCTGAGGTGGACGACGTAAAGACCATAAGAAACGGCAACCAATGTTATCGAGAGCTATAGCGATCTGTTTCACTTGATCCGTTGGTAAACTCCCCTGGCTCCCAAAACAGAGTAGCACCACCGAATTAGGTGGCTGTTTGTCCAGCCAATTTGTTATTTCTGCCTCCTCTGACTCCGACTGTGATTTCGATTGGTTTAAAATTGGACCAATTGGATAGATGGATGGGCAGGGGATGAGCTTGCTCAGATCTTGATAGGTTGTTGTTATTGTATGCATCCAAGGCGTATACTTCTAGTTCAGCAAAAGTGTTGATGATGATTCCTTTGGCTTTTCTATACCCACGAGCAAAATCGAGAAATCTCCCTAACCATGTGTCTCTATCGACTAGAACCATTGGCAATACGTTCGTAGGAACAGGGTATGCGTAGCTAGGAAATGATAACAGAGCAGTACCATCATCAGAGTTTTTGAAACTGGAAACATCTCTCGAACACTCATCTTCAAGAAACTGGAAATGAATCATCAACCCAAGAAAAGCAGCAGGGGAAGTGAAAAACACATAGCTCGGGATCCCAAACTCTTCAGCTACATCCATCAATGGAGTGCATAACATGTCTACAACAAATCCAGCAAGTTTAACACCGCCCCGTTGACTTATTAAAAATTCCCTGATTCGAGATTTTTGAGTTTGTACTAATCTGTTAACAAAGTGTCCTCGAGTTTTAGAGCTCCATTCCGGGGTTGGATCAACAGGTGGTAATTCAAAGAATCGAAGACGTTCAGAGGATGATGAATCAATTACAGAGTCGACAAAAGGGCCACTAACAGGGTCGATGTAATCAGGGAGTTTCATAATGAGGACAGTGATTGAGAGTTGATGATTTCGATTGATGAAAAGCTTGGCCAACTCCAACATCTGAGCAACATGGCCCATTGCCGGAGAAGGGATCAGAATCAATTCTGCTAATTTCTCCATAGGATCAAATTGTTTCTTTCAATTCAACTGCTAATGTACTTTCACTAAAATGGAAGAAGAGATGTTTACAACAATAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-fz43C4/lycopersicum_combined_unigene_seqs" ref_id="SGN-U317317" ref_strand="+" ref_description="SGN-U317317        Tomato 200607 #1 [21 ESTs aligned] arabidopsis/peptide: | Symbol: None | signal transducer of phototropic response (RPT2), identical to RPT2 (Arabidopsis thaliana) gi:6959488:gb:AAF33112 | chr2:13009819-13012672 REVERSE | Aliases: T6B20.13, T6B20_13, AT2G30510(evalue: 0, score=816) genbank/nr: hypothetical(evalue: 0, score=816)">
      <seq>gacagacaaacttttctctatgtatcttatataataagacccctactctttattatatccacataaaagttttccgctctatgcactaaaaccaatctcacatggctactcctctcaaaaataccaatagactctctcttgcaatggaaagaactggccaatgggtattttcacaagaaattccaactgatgttattgttgaagtaggtgaagcaaactttaatcttcacaagttcatgctagtagcaaagagcaattacataaggaaacttatacttgatactaaagaaagtgatgtaagtcgtataaacttgtctgatattcctggagggccagagatgtttgagaaggcagccaagttctgctatggagttaactttgaaatcacagtacataacgttgctgctcttcgttgtgctgctgaatatcttcaaatgactgataaatactgtgacaacaatctcgcaagcagaacagaggattttctagctcaagttgccttgactagcctttctggtgcacttgttgtgttaaagtcatgtgaaaatcttcttcctcttgcacatgatctcaatatcattcaaagatgtgttgacatcgccggtgctaaggcgtgtgtggaggcgaattttcctagcagatcaccaccaaattggtggacggaagagttaactatcttagatgtagcttttttcgagagaattattgttgcaatgaaaactcgtggggcaaaagcgttaaccatagcaagtgccataatcacatatacagagagatctcttcgtgatcttgtacgtgaccactcaggaaacaacacgagattaatggtaccagaggattcggatatgagaatgcatcaacgggaacttctagagtcgattgtgactctgttgcccgcggagagagcagcttttccaatcaatttcttgtgttgtctcctgcgtacagctattttcttaagagcagccagtagctgcaagaatgaattggagaaaaggatatcagcaatactagaacacgtgacagtcgatgatctgttagtcttgtctttttcttacgacggagaaagactattcgatcttgagagcgtgaggagaatcatttccggatttatggagaaagagaagagtgtagctgtgtttaaaggtggtgattttggagacgtttgtaccaccgctatgcagagagttgcaaagactgtcgatgcttatcttggtgaaatcgctacatttggagatctcagtatatcaaaattcaatggaattgctattttggttcctaagggcgcgagaaaggctgatgatgatctttatcgagctgttgatatctacttgaaggcacatccacatttggatgaaattgaaagagaaaaagtgtgtagtgtgatggatcctttgaaactatcacatgaagcaagagtccatgcttctcaaaacaaacgtttgccggtgcaaatagtccttcatgctctctatttcgatcaactaaagataaggagcggagcagcagatgatagtaataacaacatgcccgaagccatggcaacaaggaatcaattacaagctgatgtttccctcgtaaaggaaaatgaagttttgagaacggagttgctaaagatgaagatgtacatagcagatatacagaaaacaacaaattctagtcaaggaacatcaaaagggagtctgaagaagacaacattcttctcttctgtctccaaaacattaggcaaattcaatccctttaaacatggatcaaaggacacttctagtattgttgatgatgctgctctagatcttactaagcctaggagaagaagattttccatatcttaagctatttacattatttggtttaattttagttttatgttgtgtgaaaaaactatgattgattttgtactgtaaaggattgattgattatgttgtttgattatattgttatgttaatatattcatgtatcacacttgatcaagattgatttcatcttttaaaaaaaaaaaaaaaaaactcgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0049C13-uzRID/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0049C13.2" temp_strand="-" temp_description="C07HBa0049C13.2  AC212618.2 htgs_phase:2 submitted_to_sgn_as:gi|164698548|gb|AC212618.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0049C13, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="30320" stop="27347"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30020" g_stop="29858" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="163" r_length="163" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29857" i_stop="29784" i_length="74">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29783" g_stop="29714" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="233" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29713" i_stop="29566" i_length="148">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.798" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29565" g_stop="29188" g_length="378"/>
          <reference_exon_boundary r_type="cDNA" r_start="234" r_stop="611" r_length="378" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29187" i_stop="29121" i_length="67">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29120" g_stop="28395" g_length="726"/>
          <reference_exon_boundary r_type="cDNA" r_start="612" r_stop="1337" r_length="726" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="28394" i_stop="28301" i_length="94">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28300" g_stop="27648" g_length="653"/>
          <reference_exon_boundary r_type="cDNA" r_start="1338" r_stop="1990" r_length="653" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1991" polyA_stop="2008"/>
      <MATCH_line gen_id="C07HBa0049C13.2" gen_strand="-" ref_id="SGN-U317317" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1990</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0049C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U317317" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30020" e_stop="29858"/>
          <exon e_start="29783" e_stop="29714"/>
          <exon e_start="29565" e_stop="29188"/>
          <exon e_start="29120" e_stop="28395"/>
          <exon e_start="28300" e_stop="27648"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACAGACAAACTTTTCTCTATGTATCTTATATAATAAGACCCCTACTCTTTATTATATCCACATAAAAGTTTTCCGCTCTATGCACTAAAACCAATCTCACATGGCTACTCCTCTCAAAAATACCAATAGACTCTCTCTTGCAATGGAAAGAACTGGCCAATGGTACTACCACTATCTCTTAATTTTTCCTTCATGTATGTTTTGTTTTGTGTTAACAATTATAGTCCATGTTACAGGGTATTTTCACAAGAAATTCCAACTGATGTTATTGTTGAAGTAGGTGAAGCAAACTTTAATCTTCACAAGGTATGTACACATTCAAGATCTATGATTTTTAGATGCAATTAATACTGAATCTAATGACAATTAACTAATGTTGTTGGCCAGCTAGTACTACTGCACCAAAAATGATTCTAATGACAATTAACTAATGGTGATGTTTCTGTTATGTCAGTTCATGCTAGTAGCAAAGAGCAATTACATAAGGAAACTTATACTTGATACTAAAGAAAGTGATGTAAGTCGTATAAACTTGTCTGATATTCCTGGAGGGCCAGAGATGTTTGAGAAGGCAGCCAAGTTCTGCTATGGAGTTAACTTTGAAATCACAGTACATAACGTTGCTGCTCTTCGTTGTGCTGCTGAATATCTTCAAATGACTGATAAATACTGTGACAACAATCTCGCAAGCAGAACAGAGGATTTTCTAGCTCAAGTTGCCTTGACTAGCCTTTCTGGTGCACTTGTTGTGTTAAAGTCATGTGAAAATCTTCTTCCTCTTGCACATGATCTCAATATCATTCAAAGATGTGTTGACATCGCCGGTGCTAAGGTAGTTAGTTAGTTACATATATTCTATTCGTATATGGATTAGGTGAATACTAATTATGTCCTTGTAGGCGTGTGTGGAGGCGAATTTTCCTAGCAGATCACCACCAAATTGGTGGACGGAAGAGTTAACTATCTTAGATGTAGCTTTTTTCGAGAGAATTATTGTTGCAATGAAAACTCGTGGGGCAAAAGCGTTAACCATAGCAAGTGCCATAATCACATATACAGAGAGATCTCTTCGTGATCTTGTACGTGACCACTCAGGAAACAACACGAGATTAATGGTACCAGAGGATTCGGATATGAGAATGCATCAACGGGAACTTCTAGAGTCGATTGTGACTCTGTTGCCCGCGGAGAGAGCAGCTTTTCCAATCAATTTCTTGTGTTGTCTCCTGCGTACAGCTATTTTCTTAAGAGCAGCCAGTAGCTGCAAGAATGAATTGGAGAAAAGGATATCAGCAATACTAGAACACGTGACAGTCGATGATCTGTTAGTCTTGTCTTTTTCTTACGACGGAGAAAGACTATTCGATCTTGAGAGCGTGAGGAGAATCATTTCCGGATTTATGGAGAAAGAGAAGAGTGTAGCTGTGTTTAAAGGTGGTGATTTTGGAGACGTTTGTACCACCGCTATGCAGAGAGTTGCAAAGACTGTCGATGCTTATCTTGGTGAAATCGCTACATTTGGAGATCTCAGTATATCAAAATTCAATGGAATTGCTATTTTGGTTCCTAAGGGCGCGAGAAAGGCTGATGATGATCTTTATCGAGCTGTTGATATCTACTTGAAGGTGAGATCTTTAAATATATATATATATATATGTATATGAGTATCAACTACAACAAGTTAACAATTATATTGAACATGTTGTGCTAAAATTGCAGGCACATCCACATTTGGATGAAATTGAAAGAGAAAAAGTGTGTAGTGTGATGGATCCTTTGAAACTATCACATGAAGCAAGAGTCCATGCTTCTCAAAACAAACGTTTGCCGGTGCAAATAGTCCTTCATGCTCTCTATTTCGATCAACTAAAGATAAGGAGCGGAGCAGCAGATGATAGTAATAACAACATGCCCGAAGCCATGGCAACAAGGAATCAATTACAAGCTGATGTTTCCCTCGTAAAGGAAAATGAAGTTTTGAGAACGGAGTTGCTAAAGATGAAGATGTACATAGCAGATATACAGAAAACAACAAATTCTAGTCAAGGAACATCAAAAGGGAGTCTGAAGAAGACAACATTCTTCTCTTCTGTCTCCAAAACATTAGGCAAATTCAATCCCTTTAAACATGGATCAAAGGACACTTCTAGTATTGTTGATGATGCTGCTCTAGATCTTACTAAGCCTAGGAGAAGAAGATTTTCCATATCTTAAGCTATTTACATTATTTGGTTTAATTTTAGTTTTATGTTGTGTGAAAAAACTATGATTGATTTTGTACTGTAAAGGATTGATTGATTATGTTGTTTGATTATATTGTTATGTTAATATATTCATGTATCACACTTGATCAAGATTGATTTCATCTTTTT</genome_strand>
        <mrna_strand>GACAGACAAACTTTTCTCTATGTATCTTATATAATAAGACCCCTACTCTTTATTATATCCACATAAAAGTTTTCCGCTCTATGCACTAAAACCAATCTCACATGGCTACTCCTCTCAAAAATACCAATAGACTCTCTCTTGCAATGGAAAGAACTGGCCAATG..........................................................................GGTATTTTCACAAGAAATTCCAACTGATGTTATTGTTGAAGTAGGTGAAGCAAACTTTAATCTTCACAAG....................................................................................................................................................TTCATGCTAGTAGCAAAGAGCAATTACATAAGGAAACTTATACTTGATACTAAAGAAAGTGATGTAAGTCGTATAAACTTGTCTGATATTCCTGGAGGGCCAGAGATGTTTGAGAAGGCAGCCAAGTTCTGCTATGGAGTTAACTTTGAAATCACAGTACATAACGTTGCTGCTCTTCGTTGTGCTGCTGAATATCTTCAAATGACTGATAAATACTGTGACAACAATCTCGCAAGCAGAACAGAGGATTTTCTAGCTCAAGTTGCCTTGACTAGCCTTTCTGGTGCACTTGTTGTGTTAAAGTCATGTGAAAATCTTCTTCCTCTTGCACATGATCTCAATATCATTCAAAGATGTGTTGACATCGCCGGTGCTAAG...................................................................GCGTGTGTGGAGGCGAATTTTCCTAGCAGATCACCACCAAATTGGTGGACGGAAGAGTTAACTATCTTAGATGTAGCTTTTTTCGAGAGAATTATTGTTGCAATGAAAACTCGTGGGGCAAAAGCGTTAACCATAGCAAGTGCCATAATCACATATACAGAGAGATCTCTTCGTGATCTTGTACGTGACCACTCAGGAAACAACACGAGATTAATGGTACCAGAGGATTCGGATATGAGAATGCATCAACGGGAACTTCTAGAGTCGATTGTGACTCTGTTGCCCGCGGAGAGAGCAGCTTTTCCAATCAATTTCTTGTGTTGTCTCCTGCGTACAGCTATTTTCTTAAGAGCAGCCAGTAGCTGCAAGAATGAATTGGAGAAAAGGATATCAGCAATACTAGAACACGTGACAGTCGATGATCTGTTAGTCTTGTCTTTTTCTTACGACGGAGAAAGACTATTCGATCTTGAGAGCGTGAGGAGAATCATTTCCGGATTTATGGAGAAAGAGAAGAGTGTAGCTGTGTTTAAAGGTGGTGATTTTGGAGACGTTTGTACCACCGCTATGCAGAGAGTTGCAAAGACTGTCGATGCTTATCTTGGTGAAATCGCTACATTTGGAGATCTCAGTATATCAAAATTCAATGGAATTGCTATTTTGGTTCCTAAGGGCGCGAGAAAGGCTGATGATGATCTTTATCGAGCTGTTGATATCTACTTGAAG..............................................................................................GCACATCCACATTTGGATGAAATTGAAAGAGAAAAAGTGTGTAGTGTGATGGATCCTTTGAAACTATCACATGAAGCAAGAGTCCATGCTTCTCAAAACAAACGTTTGCCGGTGCAAATAGTCCTTCATGCTCTCTATTTCGATCAACTAAAGATAAGGAGCGGAGCAGCAGATGATAGTAATAACAACATGCCCGAAGCCATGGCAACAAGGAATCAATTACAAGCTGATGTTTCCCTCGTAAAGGAAAATGAAGTTTTGAGAACGGAGTTGCTAAAGATGAAGATGTACATAGCAGATATACAGAAAACAACAAATTCTAGTCAAGGAACATCAAAAGGGAGTCTGAAGAAGACAACATTCTTCTCTTCTGTCTCCAAAACATTAGGCAAATTCAATCCCTTTAAACATGGATCAAAGGACACTTCTAGTATTGTTGATGATGCTGCTCTAGATCTTACTAAGCCTAGGAGAAGAAGATTTTCCATATCTTAAGCTATTTACATTATTTGGTTTAATTTTAGTTTTATGTTGTGTGAAAAAACTATGATTGATTTTGTACTGTAAAGGATTGATTGATTATGTTGTTTGATTATATTGTTATGTTAATATATTCATGTATCACACTTGATCAAGATTGATTTCATCTTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-fz43C4/lycopersicum_combined_unigene_seqs" ref_id="SGN-U336045" ref_strand="+" ref_description="SGN-U336045        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | similar to phototropic-responsive NPH3 family protein [Arabidopsis thaliana] (TAIR:At5g48800.1); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAN77296.1); contains InterPro domain NPH3 (InterPro:IPR004249) | chr2:13009819-13012672 REVERSE | Aliases: None(evalue: 5e-73, score=271) genbank/nr: gi|1946368|gb|AAB63086.1| unknown protein [Arabidopsis thaliana] (evalue: 4e-71, score=271)">
      <seq>aagagtgtagctgtgtttaaaggtggtgattttggagacgtttgtaccaccgctatgcagagagttgcaaagactgtcgatgcttatcttggtgaaatcgctacatttggagatctcagtatatcaaaattcaatggaattgctattttggttcctaagggcgcgagaaaggctgatgatgatctttatcgagctgttgatatctacttgaaggcacatccacatttggatgaaattgaaagagaaaaagtgtgtagtgtgatggatcctttgaaactatcacatgaagcaagagtccatgcttctcaaaacaaacgtttgccggtgcaaatagtccttcatgctctctatttcgatcaattacaagctgatgtttccctcgtaaaggaaaatgaagttttgagaacggagttgctaaagatgaagatgtacatagcagatatacagaaaacaacaaattctagtcaaggaacatcaaaagggagtctgaagaagacaacattcttctcttctgtctccaaaacattaggcaaattcaatccctttaaacatggatcaaaggacacttctagtattggtgatgatgctgctctagatcttactaagcctangagaagaagatnntccatatcttaagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0049C13-uzRID/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0049C13.2" temp_strand="-" temp_description="C07HBa0049C13.2  AC212618.2 htgs_phase:2 submitted_to_sgn_as:gi|164698548|gb|AC212618.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0049C13, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="28907" stop="27503"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28607" g_stop="28395" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="213" r_length="213" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28394" i_stop="28301" i_length="94">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28300" g_stop="28159" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="214" r_stop="355" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28158" i_stop="28087" i_length="72">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28086" g_stop="27803" g_length="284"/>
          <reference_exon_boundary r_type="cDNA" r_start="356" r_stop="639" r_length="284" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0049C13.2" gen_strand="-" ref_id="SGN-U336045" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>639</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0049C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U336045" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28607" e_stop="28395"/>
          <exon e_start="28300" e_stop="28159"/>
          <exon e_start="28086" e_stop="27803"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAGTGTAGCTGTGTTTAAAGGTGGTGATTTTGGAGACGTTTGTACCACCGCTATGCAGAGAGTTGCAAAGACTGTCGATGCTTATCTTGGTGAAATCGCTACATTTGGAGATCTCAGTATATCAAAATTCAATGGAATTGCTATTTTGGTTCCTAAGGGCGCGAGAAAGGCTGATGATGATCTTTATCGAGCTGTTGATATCTACTTGAAGGTGAGATCTTTAAATATATATATATATATATGTATATGAGTATCAACTACAACAAGTTAACAATTATATTGAACATGTTGTGCTAAAATTGCAGGCACATCCACATTTGGATGAAATTGAAAGAGAAAAAGTGTGTAGTGTGATGGATCCTTTGAAACTATCACATGAAGCAAGAGTCCATGCTTCTCAAAACAAACGTTTGCCGGTGCAAATAGTCCTTCATGCTCTCTATTTCGATCAACTAAAGATAAGGAGCGGAGCAGCAGATGATAGTAATAACAACATGCCCGAAGCCATGGCAACAAGGAATCAATTACAAGCTGATGTTTCCCTCGTAAAGGAAAATGAAGTTTTGAGAACGGAGTTGCTAAAGATGAAGATGTACATAGCAGATATACAGAAAACAACAAATTCTAGTCAAGGAACATCAAAAGGGAGTCTGAAGAAGACAACATTCTTCTCTTCTGTCTCCAAAACATTAGGCAAATTCAATCCCTTTAAACATGGATCAAAGGACACTTCTAGTATTGTTGATGATGCTGCTCTAGATCTTACTAAGCCTAGGAGAAGAAGATTTTCCATATCTTAAGCT</genome_strand>
        <mrna_strand>AAGAGTGTAGCTGTGTTTAAAGGTGGTGATTTTGGAGACGTTTGTACCACCGCTATGCAGAGAGTTGCAAAGACTGTCGATGCTTATCTTGGTGAAATCGCTACATTTGGAGATCTCAGTATATCAAAATTCAATGGAATTGCTATTTTGGTTCCTAAGGGCGCGAGAAAGGCTGATGATGATCTTTATCGAGCTGTTGATATCTACTTGAAG..............................................................................................GCACATCCACATTTGGATGAAATTGAAAGAGAAAAAGTGTGTAGTGTGATGGATCCTTTGAAACTATCACATGAAGCAAGAGTCCATGCTTCTCAAAACAAACGTTTGCCGGTGCAAATAGTCCTTCATGCTCTCTATTTCG........................................................................ATCAATTACAAGCTGATGTTTCCCTCGTAAAGGAAAATGAAGTTTTGAGAACGGAGTTGCTAAAGATGAAGATGTACATAGCAGATATACAGAAAACAACAAATTCTAGTCAAGGAACATCAAAAGGGAGTCTGAAGAAGACAACATTCTTCTCTTCTGTCTCCAAAACATTAGGCAAATTCAATCCCTTTAAACATGGATCAAAGGACACTTCTAGTATTGGTGATGATGCTGCTCTAGATCTTACTAAGCCTANGAGAAGAAGATNNTCCATATCTTAAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-fz43C4/lycopersicum_combined_unigene_seqs" ref_id="SGN-U322792" ref_strand="+" ref_description="SGN-U322792        Tomato 200607 #1 [7 ESTs aligned] genbank/nr: gi|15144516|gb|AAK84483.1| putative copia-like polyprotein [Lycopersicon esculentum](evalue: 2e-16, score=90.1)">
      <seq>cagagtttatgatacgccgaaagcgtaatagaccaattgattccaaatataaaattccttaaagaaggaaggagcaaatgatcaatatggtcatgataatgaggcaagtgctataaaggagcacattgacataacacttcataaaatcttgaaaaaggttcaggtacctgaaataatgaaaaaaattgaagagatctcgataagttatgtcttgttggaatcgatatcaaataaccgtcgacggtatctttgatatgaggtagcgctcaatgatataaattgtgatgaggatcttgaattcaaatctgtcatatagtgtggacagattaatggttgaccaagtaaaatgcacaattcaagtatattttgtttcacttagaaaagtgacattttggactggtagtccataaatcaaggtataatgtcagtggggtacaaataaattattatgcaataatataaccgtaagatatcaaatacggtttgtgtcttggggcataaaggtttatcgcaaaaatcctgacattattggagatgttttctcctttggtggatgcaatgaggtttgttttgatctggcaacatatgaaaagcttgaatgcatgtaatgaataattgtaatgtctagctagacaatgaaggttatatgaaaatccttgaaacaatcgaggtgtctgaagcatacaagagtttgaaagaaactttttcaataaagcttcaagaatccttatatggattgaaatagtcaaggaagaaaagggtacaaaagaatgatcctaattgtccttgtatttttatgaaaaggtcttggtaagacaaaattttgtcttgacctacagattgttaatttgacaaataaaatatttgtctaacagtgcacatacactgaaaaattttgatgcaattttatgtgaataaatcgcattcattgagtaccccaatgattatgagattacttgacataaatgatgattcagtttgatctcaaaagaaggatgatgagtttcttggtgatgaaactctatcttggtgcaatcagggcactagtgcatcttactaacaatattattccagatatttgttttgcagtaaatttact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0049C13-uzRID/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0049C13.2" temp_strand="+" temp_description="C07HBa0049C13.2  AC212618.2 htgs_phase:2 submitted_to_sgn_as:gi|164698548|gb|AC212618.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0049C13, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="62561" stop="64255"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62861" g_stop="63955" g_length="1095"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1099" r_length="1099" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0049C13.2" gen_strand="+" ref_id="SGN-U322792" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>1095</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0049C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U322792" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62861" e_stop="63955"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAGTCTATGATATGCCGGAAGCGTAATAGACCAATCGATTCCAAATATAAAATTCCTTGTAGAAGGAAGGAGCAAATGATCAATATGGTCATGATAATGAGGCAAGTGCTATAAAAGAGCACATTGACATAACACTTCATAAAATCTTGAAAAAGGTTCAGGTACCTGAAATAATG--AAAAA-TGAAGAGATCTCGATAAGTTATGTCTTGTTGGAATCGATATCAAATAACCGTCGACGGTATCTTTGATATGAGGTAGCGCTCAATGATAT-AATTGTGATGAGGATCTTGAATTCAAATCTGTCATATAGTGAGGACAGATAAATGGTTGGCCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGGTAGTCCATAAATCAAGATATAATGTCAGTGGGGTACAAATAAATTATTATGCGATAGTATAACCGTAAGATATCAAATACGGTTTGTGCCTTGGGGCATAAAGGTTTATCGCAAAAATCCTGACATTAGTGGAGATGTTTTCTCCTTTGGTGGATGAAATGAGGTTTGTTTTGATCTGGCAACATATGAAAA-CTTGAATGCATGTAAATGAATAATTGTAATGTCTAGCTAGACAATGAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAGCATATAAGAGTTTGAAAGAAACTTATCCAATAAAGCTTCAAGAATTCTTATATGGATTGAAATAGTCAAGGAAGAAAAAGGGTACAAAAGAATGACCCTAATTGTCCTTGTATTTTTATGAAAAGGCCTTGGTAAGACAAAATTTTGTCTTGACCTACAGATTGTTAATTTGACAAATAAAATATTTGTCTAACGGTGCACATACACTGAAAAATTTTGATGCAATTTTATGTGGATATATCGCATTCATTGAGTACCCCAATGATTATGAGATCACTTGACATAAATGATGATTCAGTTTGATCTCAAAAGAAGGATGA-GAGTTTCTTGGTGATGAAACTTTATCTTGGTGCAATCAGGGCACTAGGGCATCTTACTAACAATATTATTCCAGATATTTGTTTTGCAGTAAATTTACT</genome_strand>
        <mrna_strand>CAGAGTTTATGATACGCCGAAAGCGTAATAGACCAATTGATTCCAAATATAAAATTCCTTAAAGAAGGAAGGAGCAAATGATCAATATGGTCATGATAATGAGGCAAGTGCTATAAAGGAGCACATTGACATAACACTTCATAAAATCTTGAAAAAGGTTCAGGTACCTGAAATAATGAAAAAAATTGAAGAGATCTCGATAAGTTATGTCTTGTTGGAATCGATATCAAATAACCGTCGACGGTATCTTTGATATGAGGTAGCGCTCAATGATATAAATTGTGATGAGGATCTTGAATTCAAATCTGTCATATAGTGTGGACAGATTAATGGTTGACCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATTATTATGCAATAATATAACCGTAAGATATCAAATACGGTTTGTGTCTTGGGGCATAAAGGTTTATCGCAAAAATCCTGACATTATTGGAGATGTTTTCTCCTTTGGTGGATGCAATGAGGTTTGTTTTGATCTGGCAACATATGAAAAGCTTGAATGCATGT-AATGAATAATTGTAATGTCTAGCTAGACAATGAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAGCATACAAGAGTTTGAAAGAAACTTTTTCAATAAAGCTTCAAGAATCCTTATATGGATTGAAATAGTCAAGGAAG-AAAAGGGTACAAAAGAATGATCCTAATTGTCCTTGTATTTTTATGAAAAGGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAGATTGTTAATTTGACAAATAAAATATTTGTCTAACAGTGCACATACACTGAAAAATTTTGATGCAATTTTATGTGAATAAATCGCATTCATTGAGTACCCCAATGATTATGAGATTACTTGACATAAATGATGATTCAGTTTGATCTCAAAAGAAGGATGATGAGTTTCTTGGTGATGAAACTCTATCTTGGTGCAATCAGGGCACTAGTGCATCTTACTAACAATATTATTCCAGATATTTGTTTTGCAGTAAATTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-fz43C4/lycopersicum_combined_unigene_seqs" ref_id="SGN-U330310" ref_strand="+" ref_description="SGN-U330310        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: AT3G21760.1 | Symbol: None | UDP-glucoronosyl/UDP-glucosyl transferase family protein, contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase | chr3:7667034-7668731 FORWARD | Aliases: MSD21.9 (evalue: 4e-28, score=120) genbank/nr: gi|20146091|dbj|BAB88934.1| glucosyltransferase NTGT3 [Nicotiana tabacum](evalue: 5e-37, score=156)">
      <seq>acaaatttgttaacagaaatacaaagaaaatacctcaatgaggacgaaagcagagcttgttttcattccttctccggcagcaggtcacctcatctctgccgttgaaattgcaaaactgattctcaacagagatgagaggctctgtatctctatcctcattatgaagcttccaatggatttcggtgttcaatcttacatcgaatcactctcatctataccccgtttgcagttcgttgacatcactgttgacgaaaatactattgctggattcatgtcaaataaggagaccttcttcacgaacttcgttcgaagtcataaaccaaaagtaaaagattttttaaataactccagcttttctagatctgattctcgtcttgctggcttcgttctcgacatgttctgcacgtcaatgatagacgtagctaatgaattttgtgttcctagttacattttcttcacctcaaatgctgctttccttgccctctgttttcatttcgagtctctgaaaaaggagcatcacgtcgatacctccaaatgcaaaaattcaaatgaagaattaacaatcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0049C13-uzRID/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0049C13.2" temp_strand="+" temp_description="C07HBa0049C13.2  AC212618.2 htgs_phase:2 submitted_to_sgn_as:gi|164698548|gb|AC212618.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0049C13, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="74106" stop="75271"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74406" g_stop="74971" g_length="566"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="566" r_length="566" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0049C13.2" gen_strand="+" ref_id="SGN-U330310" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>566</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0049C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U330310" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74406" e_stop="74971"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAATTTGTTAACAGAAATACAAAGAAAATACCTCAATGAGGACGAAAGCAGAGCTTGTTTTCATTCCTTCTCCGGCAGCAGGTCACCTCATCTCTGCCGTTGAAATTGCAAAACTGATTCTCAACAGAGATGAGAGGCTCTGTATCTCTATCCTCATTATGAAGCTTCCAATGGATTTCGGTGTTCAATCTTACATCGAATCACTCTCATCTATACCCCGTTTGCAGTTCGTTGACATCACTGTTGACGAAAATACTATTGCTGGATTCATGTCAAATAAGGAGACCTTCTTCACGAACTTCGTTCGAAGTCATAAACCAAAAGTAAAAGATTTTTTAAATAACTCCAGCTTTTCTAGATCTGATTCTCGTCTTGCTGGCTTCGTTCTCGACATGTTCTGCACGTCAATGATAGACGTAGCTAATGAATTTTGTGTTCCTAGTTACATTTTCTTCACCTCAAATGCTGCTTTCCTTGCCCTCTGTTTTCATTTCGAGTCTCTGAAAAAGGAGCATCACGTCGATACCTCCAAATGCAAAAATTCAAATGAAGAATTAACAATCC</genome_strand>
        <mrna_strand>ACAAATTTGTTAACAGAAATACAAAGAAAATACCTCAATGAGGACGAAAGCAGAGCTTGTTTTCATTCCTTCTCCGGCAGCAGGTCACCTCATCTCTGCCGTTGAAATTGCAAAACTGATTCTCAACAGAGATGAGAGGCTCTGTATCTCTATCCTCATTATGAAGCTTCCAATGGATTTCGGTGTTCAATCTTACATCGAATCACTCTCATCTATACCCCGTTTGCAGTTCGTTGACATCACTGTTGACGAAAATACTATTGCTGGATTCATGTCAAATAAGGAGACCTTCTTCACGAACTTCGTTCGAAGTCATAAACCAAAAGTAAAAGATTTTTTAAATAACTCCAGCTTTTCTAGATCTGATTCTCGTCTTGCTGGCTTCGTTCTCGACATGTTCTGCACGTCAATGATAGACGTAGCTAATGAATTTTGTGTTCCTAGTTACATTTTCTTCACCTCAAATGCTGCTTTCCTTGCCCTCTGTTTTCATTTCGAGTCTCTGAAAAAGGAGCATCACGTCGATACCTCCAAATGCAAAAATTCAAATGAAGAATTAACAATCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-fz43C4/lycopersicum_combined_unigene_seqs" ref_id="SGN-U342484" ref_strand="+" ref_description="SGN-U342484        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|49533772|gb|AAT66771.1| putative polyprotein [Solanum demissum] (evalue: 2e-90, score=315)">
      <seq>ttttgtatcatccggggaaggccaatgttgtggccgatgctttgagtaggaagactcatagcatggggagtcttgcatctcttagtgttgaggaaagaccattggctagagatgttcaattgttagctaacagtcttgtccgattacagatctcagaggagagtgatgggatgattgcttttattgaggctcgatcttctttagtcaagcagattcgtgcacaccagtttgatgacgaaaaattatgtctcattcgagacaaagtattgagaggggaagctaaggaggttgtccttgattctgatggtgtcttgaggatcggaggcaggatttgtgtgcccaagacaggcgatttgattagattgatccttgaggaggcccattgttctcgatattctatgcatccgggagaggcgaaaatgtatcatgatctgagtcagcattactggtggtgtgggatgaagagagatattacagactttgttttgaggtgtttgacttgccagttggtcaagtgtgagcaccagtggcctgggggtgtatctcaaaggatgcctattcttacttggacgtgggagtggattacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0049C13-uzRID/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0049C13.2" temp_strand="-" temp_description="C07HBa0049C13.2  AC212618.2 htgs_phase:2 submitted_to_sgn_as:gi|164698548|gb|AC212618.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0049C13, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="82459" stop="81273"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82159" g_stop="81573" g_length="587"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="588" r_length="588" r_score="0.911"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0049C13.2" gen_strand="-" ref_id="SGN-U342484" ref_strand="+">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>587</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0049C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U342484" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82159" e_stop="81573"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTGTATCATCCAGGAAAGGCCAATGTTGTGGCCGATGCTCTGAGTAGGAAGACTCCTAGCATGGGGAGTCTTGCAGTGCTTAGTATTATGGAGAGACCATTGGCTAGAGATGTGCAGATATTAGCTAACAGTCTTGTCCGCTTGCAGATTTCAGAAGAGAGTGATGGGATGATTGCTTTTATTGAGGCTCGATCTTCTTTAGTCGAGCAAATCCGTGCACACCAGTTTGATGATGAAAAATTATGTCTCATTCGTGACAAAGTATTGAGAGGAGAAGCTAAGGAGGCTGTCCTTGATTCTGATGGTGTATTGCGGATCGGAGGCAAAATTTGTGTGCCCAAGACAGGAGATTTGATTAGATTGATTCTTGAGGAGGCCCATTGTTCTCGGTATTCCATCCATCCGGGAGCGGCGAAGATGTATCATGATCTGAGTCAGCATTA-TTGTGGTGTGGGATGAAGAGAGATATTTCAGACTTTGTTTCGAGGTGTTTGACTTGCCAGCAGGTCAAGTGTGAGCACCAGCGGCCCGGGGGTGTATCTCAGAGGATGGCTATTCCTACTTGGAAGTGGGAGCGGATTACTA</genome_strand>
        <mrna_strand>TTTTGTATCATCCGGGGAAGGCCAATGTTGTGGCCGATGCTTTGAGTAGGAAGACTCATAGCATGGGGAGTCTTGCATCTCTTAGTGTTGAGGAAAGACCATTGGCTAGAGATGTTCAATTGTTAGCTAACAGTCTTGTCCGATTACAGATCTCAGAGGAGAGTGATGGGATGATTGCTTTTATTGAGGCTCGATCTTCTTTAGTCAAGCAGATTCGTGCACACCAGTTTGATGACGAAAAATTATGTCTCATTCGAGACAAAGTATTGAGAGGGGAAGCTAAGGAGGTTGTCCTTGATTCTGATGGTGTCTTGAGGATCGGAGGCAGGATTTGTGTGCCCAAGACAGGCGATTTGATTAGATTGATCCTTGAGGAGGCCCATTGTTCTCGATATTCTATGCATCCGGGAGAGGCGAAAATGTATCATGATCTGAGTCAGCATTACTGGTGGTGTGGGATGAAGAGAGATATTACAGACTTTGTTTTGAGGTGTTTGACTTGCCAGTTGGTCAAGTGTGAGCACCAGTGGCCTGGGGGTGTATCTCAAAGGATGCCTATTCTTACTTGGACGTGGGAGTGGATTACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-fz43C4/lycopersicum_combined_unigene_seqs" ref_id="SGN-U339521" ref_strand="+" ref_description="SGN-U339521        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|49533772|gb|AAT66771.1| putative polyprotein [Solanum demissum] (evalue: 0.0001, score=50.4)">
      <seq>gcacgagttgagagtctgagacaggatggtttatcggttacagagtgtaaggcgcgtttttgccagttgtctaggcatgcgttggccattattccaaatgaaacagagaggatccgtagatttgtgaggggattgactttctctatcaggtcagctgtgtttcggacatctaggggggacttctttccagtctattgtgagcgccgccaaagaggcagaattgatggagagagaggagtttggggaccctaaaagagctcgtatatcaggtcaatttcagggtgcctcatctggaggtaggggatcacagagagtgagtggttcttttcagcagcggggacctattcatgcatctatgccgacatttgagggtggccagacatctaagggttcttatggcccgggtcatggctcgtacggttcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0049C13-uzRID/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0049C13.2" temp_strand="-" temp_description="C07HBa0049C13.2  AC212618.2 htgs_phase:2 submitted_to_sgn_as:gi|164698548|gb|AC212618.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0049C13, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="84701" stop="83673"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84401" g_stop="83973" g_length="429"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="425" r_length="425" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0049C13.2" gen_strand="-" ref_id="SGN-U339521" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>429</cumulative_length_of_scored_exons>
        <coverage percentage="1.009" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0049C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U339521" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84401" e_stop="83973"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTGAGGTTTGAGAGTCTGAGACAGGATGG-TT-TCGGTTACAGAGTATGAGGCGCGTTTTTGCCAGTTGTCTAGGCATGCATTGGCCATTATTCCAAATGAGACAGAGAGGATCCGCAGATTTGTGAGGGGATTGACTTTCTCTATCAGGTCAGCTGTGTTTCGGACATGTAGGGAGGGGACTTCTTTCCAGTCTATTGTGAGCGTCGCCAAAGAGGCGAAATTGATGGAGAGAGAGAAGTTTGGGGACCCTAAAAGAGCTCGTATATATCAGGTCAGTTTCAGGGTGCCTCATCTAGAGGTAGGGGATCACAGAGAGTGAGTGGTTCTTTTCAGCAGCGGGGACCTATTCATGCATCTATGCCGACATTTAAGGGTGGCCAGACATCTAGGGGTTCTTATGGCCCAGGTCAGGGCTCGTACGGTTCAC</genome_strand>
        <mrna_strand>GCACGAG-T-TGAGAGTCTGAGACAGGATGGTTTATCGGTTACAGAGTGTAAGGCGCGTTTTTGCCAGTTGTCTAGGCATGCGTTGGCCATTATTCCAAATGAAACAGAGAGGATCCGTAGATTTGTGAGGGGATTGACTTTCTCTATCAGGTCAGCTGTGTTTCGGACATCTA-GG-GGGGACTTCTTTCCAGTCTATTGTGAGCGCCGCCAAAGAGGCAGAATTGATGGAGAGAGAGGAGTTTGGGGACCCTAAAAGAGCTCG--TATATCAGGTCAATTTCAGGGTGCCTCATCTGGAGGTAGGGGATCACAGAGAGTGAGTGGTTCTTTTCAGCAGCGGGGACCTATTCATGCATCTATGCCGACATTTGAGGGTGGCCAGACATCTAAGGGTTCTTATGGCCCGGGTCATGGCTCGTACGGTTCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-fz43C4/lycopersicum_combined_unigene_seqs" ref_id="SGN-U344270" ref_strand="+" ref_description="SGN-U344270        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: beta-galactosidase(evalue: 3e-30, score=135)">
      <seq>ttgggtcggagcaccctctctagtacgagagtcatgtggtgtggtagtcgcaccaccaccctgataaaagccctctagaacacttaacaccctaaaaagtgtatcctgaagcaaaggtgtgactacaggatctggaggaacctggtcacctctgccatcaatttgaggttttgtagagacctctctagcacgacctctcactggtgctgctccacgtccacgacctctagctactatcgtactactagaacgacatctagctcgagacctacccctacccataactggggcctcaacaactgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0049C13-uzRID/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0049C13.2" temp_strand="+" temp_description="C07HBa0049C13.2  AC212618.2 htgs_phase:2 submitted_to_sgn_as:gi|164698548|gb|AC212618.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0049C13, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="84520" stop="85422"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84820" g_stop="85122" g_length="303"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="303" r_length="303" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0049C13.2" gen_strand="+" ref_id="SGN-U344270" ref_strand="+">
        <total_alignment_score>0.904</total_alignment_score>
        <cumulative_length_of_scored_exons>303</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0049C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U344270" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84820" e_stop="85122"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGGTCTGAGCCCCCTCTCTAGTACGGGAGTCATATGGTGTGGTAATTTCACCACCACCCTGAGAAAAGCCCTCTAGCACACTTAACACCCTCAATAGTGTATCCTGAAGCAAAGGTGTGACTATGGGATCTGGAGGAACCTGGTCCTCTCTGTCATCAATCTGAGGTTTGGTAGAGACCTCTCTAGCAAGACCTCTCACTGGTGCTGCTCCACGTCCACGACCTCTGGCTACTGTCGTACTACTAGCACGACCTCTTGCTCGAGATCTACCCCTACCCCTAGTTGGGGCCTCAACAACTGC</genome_strand>
        <mrna_strand>TTGGGTCGGAGCACCCTCTCTAGTACGAGAGTCATGTGGTGTGGTAGTCGCACCACCACCCTGATAAAAGCCCTCTAGAACACTTAACACCCTAAAAAGTGTATCCTGAAGCAAAGGTGTGACTACAGGATCTGGAGGAACCTGGTCACCTCTGCCATCAATTTGAGGTTTTGTAGAGACCTCTCTAGCACGACCTCTCACTGGTGCTGCTCCACGTCCACGACCTCTAGCTACTATCGTACTACTAGAACGACATCTAGCTCGAGACCTACCCCTACCCATAACTGGGGCCTCAACAACTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-fz43C4/lycopersicum_combined_unigene_seqs" ref_id="SGN-U319422" ref_strand="+" ref_description="SGN-U319422        Tomato 200607 #1 [13 ESTs aligned] arabidopsis/peptide: AT3G21790.1 | Symbol: None | UDP-glucoronosyl/UDP-glucosyl transferase family protein, contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase | chr3:7676934-7678421 REVERSE | Aliases: MSD21.15 (evalue: 5e-109, score=392) genbank/nr: gi|14349253|dbj|BAB60721.1| glucosyltransferase [Nicotiana tabacum](evalue: 4e-127, score=458)">
      <seq>tctgctctctcaaatacagagcaatggagaccaaagcagagcttgttttcattccatcgccgggattgggtcacgtcgcttccgctgtcgaattcgccaaactcctccttgctacaaatgaacgactatgcatttctcttctcgtcatgaaacatcctgctgattttggtgttcaatcttatctccaatcactcccttctctgtcccgttttcgcttcgttgatgtttcaattgacccgaaattagttgttccacttttgtctaacaaggacagattcttatacgatttcattgatggtcacaaacacaaggtaagtgaatttgttactagtaataattccaccccttcccaatttggctctactcagcttgctggctttgttcttgacatgttctgcatctccatgattgatgtagctaatgaattttgtgttcctagttatattttctttacttctgctgctgcttttctagccctgtcctttcattttgaagctttgaggaataacttcaagttcgattattccgagtctgatgaggaattatcgattctcggatttaaaaatccgtatcctgctaaagttttacctagaccagctaaagcaattacaccaagctcgactttgtactacgatgggattcgtcgttttagagagaccaaaggtattgttatcaatacgtttgcggagcttgaaccttttgctcttcagtcattgtctgatgctaaaatggctcctccgatttatcccattcatgctgtattcaattcggatgataatgaggaaaaacaggaaatagaaagtattgtggagtggttagataatcagccaaactcatctgtagtgttcttgtgctttggaaccatgggtagttttgaacctgagcaggtaaaggagatagcaattgcgttagagcatagtgggcaccggttcttgtggtctttacgaaggcctccaccaaaggggaaaatagaaatgccaagcaattatgacaattcggaggaagtgctgcctgaagggttcttggagaggacaaaaggaattgggaaactggtaggatgggcaccacaagtgactgtactttcacatcctgcggtgggggtattcgtgtcacattgtggatggaattcgacaatggagagtgtgtgttgtggggtgcctattgctgcttggcctttgtatgctgaacaacagatgaatgcgtttttgttggttaaggaattgggtttggcagtggagattcggatggactatgtcaaggactttgaggggaaaaatccagttgatatagttactgctgaggaaattgaaggcgccatacagaagcttatggcgaatggtgaagagaatgaagtgaggaatagagtgaaggaaatgcgagagaagagcagaaaagccatggaagaaggcggatcgtcttatacctctttacgacttctaattgacgatttcatcagcaacatctcctgaagaatttccgcaaaaagatcttcagcaatggcaggtttttcactggatgctcagaacataaacttttaaatgcattatgaccaaaggttgatatttgttgttgttgcatatttttagtgtaattaaagttagtattggcagttcatgccttgcaatctgtcatgcacagtcaaaagatattttccttgatcataatttttcaactcctttgtaaatatttggatttttaagtattgtggcttactgttgtttctaaatgtataaattttatttcaaagatatcaaattctatgtctgaatcccatcaaccattaataagtttgaccctcaaaaaaaaaaaaaaaaaaaaaaaaccctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0049C13-uzRID/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0049C13.2" temp_strand="+" temp_description="C07HBa0049C13.2  AC212618.2 htgs_phase:2 submitted_to_sgn_as:gi|164698548|gb|AC212618.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0049C13, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="97421" stop="99809"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97721" g_stop="99509" g_length="1789"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1798" r_length="1798" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1799" polyA_stop="1823"/>
      <MATCH_line gen_id="C07HBa0049C13.2" gen_strand="+" ref_id="SGN-U319422" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>1789</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0049C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U319422" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97721" e_stop="99509"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGCTCTCTCAAATACAGAGCAATGGAGACCAAAGCAGAGCTTGTTTTCATTCCATCGCCGGGATTGGGTCACGTCGCTTCCGCTGTCGAATTCGCCAAACTCCTCCTTGCTACAAATGAACGACTATGCATTTCTCTTCTCGTCATGAAACATCCTGCTGATTTTGGTGTTCAATCTTATCTCCAATCACTCCCTTCTCTGTCCCGTTTTCGCTTCGTTGATGTTTCAATTGACCCGAAATTAGTTGTTCCACTTTTGTCTAACAAGGACAGATTCTTATACGATTTCATTGATGGTCACAAACACAAGGTAAGTGAATTTGTTACTAGTAATAATTCCACCCCTTCCCAATTTGGCTCTACTCAGCTTGCTGGCTTTGTTCTTGACATGTTCTGCATCTCCATGATTGATGTAGCTAATGAATTTTGTGTTCCTAGTTATATTTTCTTTACTTCTGCTGCTGCTTTTCTAGCCCTGTCCTTTCATTTTGAAGCTTTGAGGAATAACTTCAAGTTCGATTATTCCGAGTCTGATGAGGAATTATCGATTCTCGGATTTAAAAATCCGTATCCTGCTAAAGTTTTACCTAGACCAGCTAAAGCAATTACACCAAGCTCGACTTTGTACTACGATGGGATTCGTCGTTTTAGAGAGACCAAAGGTATTGTTATCAATACGTTTGCGGAGCTTGAACCTTTTGCTCTTCAGTCATTGTCTGATGCTAAAATGGCTCCTCCGATTTATCCCATTCATGCTGTATTCAATTCGGATGATAATGAGGAAAAACAGGAAATAGAAAGTATTGTGGAGTGGTTAGATAATCAGCCAAACTCATCTGTAGTGTTCTTGTGCTTTGGAACCATGGGTAGTTTTGAACCTGAGCAGGTAAAGGAGATAGCAATTGCGTTAGAGCATAGTGGGCACCGGTTCTTGTGGTCTTTACGAAGGCCTCCACCAAAGGGGAAAATAGAAATGCCAAGCAATTATGACAATTCGGAGGAAGTGCTGCCTGAAGGGTTCTTGGAGAGGACAAAAGGAATTGGGAAACTGGTAGGATGGGCACCACAAGTGACTGTACTTTCACATCCTGCGGTGGGGGTATTCGTGTCACATTGTGGATGGAATTCGACAATGGAGAGTGTGTGTTGTGGGGTGCCTATTGCTGCTTGGCCGTTGTATGCTGAACAACAGATGAATGCGTTTTTGTTGGTTAAGGAATTGGGTTTGGCAGTGGAGATTCGGATGGACTATGTGAAGGACTTTGAGGGGAAAAATCCAGTTGATATAGTTACTGCTGAGGAAATTGAAGGCGCCATACAGAAGCTTATGGAGAATGGTGAAGAGAATGAAGTGAGGAAAAGAGTGAAGGAAATGCGAGAGAAGAGCAGAAAAGCCATGGAAGAAGGCGGATCGTCTTATACCTCTTTACGACTTCTAATTGACGATTTCATCAGCAACATCTCCTGAAAAATTTCCGCAAAAAGATCTTCAGCAATGGTAGGTTTTTCACTGGATGCTCAGAACATAAACTTTTAAATGCATTATGACCAAA-GTT-TTCTATGTTGATATTTGTTGTTGTT-GCATATTTTTAG-T-GTAATTATAGTT-A-GTATTGGCA-GT-TCATGCGCAGTCAAAAGATATTTTCCTTGATCATAATTTTTCAACTATTTTGTAAATATTTGGATTTTTAAGTATTGTGGCTTACTGTAGTTTCTAAATGTATAAATTTTATTTCAATGATATCAAATTCTATGTCTGAATCACATCAAACATTAATAAGTTTGACCCTC</genome_strand>
        <mrna_strand>TCTGCTCTCTCAAATACAGAGCAATGGAGACCAAAGCAGAGCTTGTTTTCATTCCATCGCCGGGATTGGGTCACGTCGCTTCCGCTGTCGAATTCGCCAAACTCCTCCTTGCTACAAATGAACGACTATGCATTTCTCTTCTCGTCATGAAACATCCTGCTGATTTTGGTGTTCAATCTTATCTCCAATCACTCCCTTCTCTGTCCCGTTTTCGCTTCGTTGATGTTTCAATTGACCCGAAATTAGTTGTTCCACTTTTGTCTAACAAGGACAGATTCTTATACGATTTCATTGATGGTCACAAACACAAGGTAAGTGAATTTGTTACTAGTAATAATTCCACCCCTTCCCAATTTGGCTCTACTCAGCTTGCTGGCTTTGTTCTTGACATGTTCTGCATCTCCATGATTGATGTAGCTAATGAATTTTGTGTTCCTAGTTATATTTTCTTTACTTCTGCTGCTGCTTTTCTAGCCCTGTCCTTTCATTTTGAAGCTTTGAGGAATAACTTCAAGTTCGATTATTCCGAGTCTGATGAGGAATTATCGATTCTCGGATTTAAAAATCCGTATCCTGCTAAAGTTTTACCTAGACCAGCTAAAGCAATTACACCAAGCTCGACTTTGTACTACGATGGGATTCGTCGTTTTAGAGAGACCAAAGGTATTGTTATCAATACGTTTGCGGAGCTTGAACCTTTTGCTCTTCAGTCATTGTCTGATGCTAAAATGGCTCCTCCGATTTATCCCATTCATGCTGTATTCAATTCGGATGATAATGAGGAAAAACAGGAAATAGAAAGTATTGTGGAGTGGTTAGATAATCAGCCAAACTCATCTGTAGTGTTCTTGTGCTTTGGAACCATGGGTAGTTTTGAACCTGAGCAGGTAAAGGAGATAGCAATTGCGTTAGAGCATAGTGGGCACCGGTTCTTGTGGTCTTTACGAAGGCCTCCACCAAAGGGGAAAATAGAAATGCCAAGCAATTATGACAATTCGGAGGAAGTGCTGCCTGAAGGGTTCTTGGAGAGGACAAAAGGAATTGGGAAACTGGTAGGATGGGCACCACAAGTGACTGTACTTTCACATCCTGCGGTGGGGGTATTCGTGTCACATTGTGGATGGAATTCGACAATGGAGAGTGTGTGTTGTGGGGTGCCTATTGCTGCTTGGCCTTTGTATGCTGAACAACAGATGAATGCGTTTTTGTTGGTTAAGGAATTGGGTTTGGCAGTGGAGATTCGGATGGACTATGTCAAGGACTTTGAGGGGAAAAATCCAGTTGATATAGTTACTGCTGAGGAAATTGAAGGCGCCATACAGAAGCTTATGGCGAATGGTGAAGAGAATGAAGTGAGGAATAGAGTGAAGGAAATGCGAGAGAAGAGCAGAAAAGCCATGGAAGAAGGCGGATCGTCTTATACCTCTTTACGACTTCTAATTGACGATTTCATCAGCAACATCTCCTGAAGAATTTCCGCAAAAAGATCTTCAGCAATGGCAGGTTTTTCACTGGATGCTCAGAACATAAACTTTTAAATGCATTATGACCAAAGGTTGATATTTGTTGTTGTTGCATATTTTTAGTGTAATTAAAGTTAGTATTGGCAGTTCATGCCTTGCAATCTGTCATGCACAGTCAAAAGATATTTTCCTTGATCATAATTTTTCAACTCCTTTGTAAATATTTGGATTTTTAAGTATTGTGGCTTACTGTTGTTTCTAAATGTATAAATTTTATTTCAAAGATATCAAATTCTATGTCTGAATCCCATCAACCATTAATAAGTTTGACCCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-fz43C4/lycopersicum_combined_unigene_seqs" ref_id="SGN-U329955" ref_strand="+" ref_description="SGN-U329955        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: AT3G21760.1 | Symbol: None | UDP-glucoronosyl/UDP-glucosyl transferase family protein, contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase | chr3:7667034-7668731 FORWARD | Aliases: MSD21.9 (evalue: 4e-46, score=181) genbank/nr: gi|20146091|dbj|BAB88934.1| glucosyltransferase NTGT3 [Nicotiana tabacum](evalue: 6e-57, score=223)">
      <seq>tgcctgaggggttcttgcaaaggacggaagcaattgggaaggtgataggatgggcaccccaggtggctatcttgagtcatgatgctgtaggaggctttgtgtcacactgtgggtggaattcgactttagagagcatgtggttcggagtaccactggcaacttggccaatctattcggagcagcaagcgaatgcatttcaattggtgaaggatttagagatagcagtggagattaagatggattataggaaggatctcagagggaccgaatcgaatgttatagtaaaagcagaggagatagagaaagcaataaagcagctgatggagcctgaaaatgaaataaggttgaaagtgaaaggcatgaaggaaaagagcagattggtgctcaaagaaggtggatcttcctacaatgctgttggacattttatcgaacaagtgatggacatcacaaattgagaaacaatctttaaaacagcgatataattattcgaaaacaataaaatttcttctacagttcgatttggtcttcttctagaccactgcattcttattttagttattatgtagttctcatgtaaaaattttcagtccaagagtactgtattaaagtgggagtacgagggtcaaacttattaatgtttgatgtgattcagacatagaatttgatatcattgaaataaaatttatacatttagaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0049C13-uzRID/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0049C13.2" temp_strand="-" temp_description="C07HBa0049C13.2  AC212618.2 htgs_phase:2 submitted_to_sgn_as:gi|164698548|gb|AC212618.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0049C13, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="100426" stop="99121"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100126" g_stop="99425" g_length="702"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="702" r_length="702" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="703" polyA_stop="724"/>
      <MATCH_line gen_id="C07HBa0049C13.2" gen_strand="-" ref_id="SGN-U329955" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>702</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0049C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U329955" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100126" e_stop="99425"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCCTGAGGGGTTCTTGCAAAGGACGGAAGCAATTGGGAAGGTGATAGGATGGGCACCCCAGGTGGCTATCTTGAGTCATGATGCTGTAGGAGGCTTTGTGTCACACTGTGGGTGGAATTCGACTTTAGAGAGCATGTGGTTCGGAGTACCACTGGCAACTTGGCCAATCTATTCGGAGCAGCAAGCGAATGCATTTCAATTGGTGAAGGATTTAGAGATAGCAGTGGAGATTAAGATGGATTATAGGAAGGATCTCAGAGGGACCGAATCGAATGTTATAGTAAAAGCAGAGGAGATAGAGAAAGCAATAAAGCAGCTGATGGAGCCTGAAAATGAAATAAGGTTGAAAGTGAAAGGCATGAAGGAAAAGAGCAGATTGGTGCTCAAAGAAGGTGGATCTTCCTACAATGCTGTTGGACATTTTATCGAACAAGTGATGGACATCACAAATTGAGAAACAATCTTTAAAACAGCGATATAATTATTCGAAAACAATAAAATTTCTTCTACAGTTCGATTTGGTCTTCTTCTAGACCACTGCATTCTTATTTTAGTTATTATGTAGTTCTCATGTAAAAATTTTCAGTCCAAGAGTACTGTATTAAAGTGGGAGTACGAGGGTCAAACTTATTAATGTTTGATGTGATTCAGACATAGAATTTGATATCATTGAAATAAAATTTATACATTTAGAAACTACA</genome_strand>
        <mrna_strand>TGCCTGAGGGGTTCTTGCAAAGGACGGAAGCAATTGGGAAGGTGATAGGATGGGCACCCCAGGTGGCTATCTTGAGTCATGATGCTGTAGGAGGCTTTGTGTCACACTGTGGGTGGAATTCGACTTTAGAGAGCATGTGGTTCGGAGTACCACTGGCAACTTGGCCAATCTATTCGGAGCAGCAAGCGAATGCATTTCAATTGGTGAAGGATTTAGAGATAGCAGTGGAGATTAAGATGGATTATAGGAAGGATCTCAGAGGGACCGAATCGAATGTTATAGTAAAAGCAGAGGAGATAGAGAAAGCAATAAAGCAGCTGATGGAGCCTGAAAATGAAATAAGGTTGAAAGTGAAAGGCATGAAGGAAAAGAGCAGATTGGTGCTCAAAGAAGGTGGATCTTCCTACAATGCTGTTGGACATTTTATCGAACAAGTGATGGACATCACAAATTGAGAAACAATCTTTAAAACAGCGATATAATTATTCGAAAACAATAAAATTTCTTCTACAGTTCGATTTGGTCTTCTTCTAGACCACTGCATTCTTATTTTAGTTATTATGTAGTTCTCATGTAAAAATTTTCAGTCCAAGAGTACTGTATTAAAGTGGGAGTACGAGGGTCAAACTTATTAATGTTTGATGTGATTCAGACATAGAATTTGATATCATTGAAATAAAATTTATACATTTAGAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-fz43C4/lycopersicum_combined_unigene_seqs" ref_id="SGN-U326063" ref_strand="+" ref_description="SGN-U326063        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: AT3G21760.1 | Symbol: None | UDP-glucoronosyl/UDP-glucosyl transferase family protein, contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase | chr3:7667034-7668731 FORWARD | Aliases: MSD21.9 (evalue: 2e-62, score=233) genbank/nr: gi|20146091|dbj|BAB88934.1| glucosyltransferase NTGT3 [Nicotiana tabacum](evalue: 3e-108, score=391)">
      <seq>cacacttgagatggcaaaggtcctaatagctagagatgaacatctcgtcattacagtcctcgtaatcaagctgccttgtgacaacaaactcagctcttatattgaatcagtctcgacaaacccaaactacaactctcaaatgaagttcattgaactccctcaagatgagtccatcttacagtcaatcacaaacacaactttcatcacatttttatccagtcataagcctcaagtcagaaattcagtgattgaaatcttgaattcaggatcaaatcgtcttgcggccctcgttattgacatgatgtgtacagcaatgatagacgttgccaatgaatttggactcccgacttatgttttctacacatctggtgctgccatgcttggtcttcagcttcatttgcagagtctcagggatgattttaacgaagatgtgacagattacgaggatgatccagaagcagagctttcggtgacaacgtatggaaacccatttccagctaaatgtttgccatctatagcctttgacaaggatggtggttccacaatgtaccttgatctttctaaaaggcttcgagaagctaaagctattcttgttaacactttctccgaattcgaatctcatgctgtcaaatccctctccctcgatgagaaaatcccacttgtatacccagtcggacccttgctaaaccttgataacgatcaggttaacaatcaagattcttctcagcatcaaactataatcaactggttagatgatcaacctgattcatcagtagtgtacctctgcttcggaagcttaggaagcttcaacgaggagcaaataaaggaaattgcatatgctctggagaagagcggatgtcgattcttgtggtccttaaagaagcctttggctaaagatacattttttccagctgcttatgataatccagaggatgttttgcctgaggggttctttgcaaaggacggaagcaatttgggaaggtgataggatgggcaccccag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0049C13-uzRID/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0049C13.2" temp_strand="-" temp_description="C07HBa0049C13.2  AC212618.2 htgs_phase:2 submitted_to_sgn_as:gi|164698548|gb|AC212618.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0049C13, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="101364" stop="99765"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101064" g_stop="100065" g_length="1000"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1002" r_length="1002" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0049C13.2" gen_strand="-" ref_id="SGN-U326063" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>1000</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0049C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U326063" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101064" e_stop="100065"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACACTTGAGATGGCAAAGGTCCTAATAGCTAGAGATGAACATCTCGTCATTACAGTCCTCGTAATCAAGCTGCCTTGTGACAACAAACTCAGCTCTTATATTGAATCAGTCTCGACAAACCCAAACTACAACTCTCAAATGAAGTTCATTGAACTCCCTCAAGATGAGTCCATCTTACAGTCAATCACAAACACAACTTTCATCACATTTTTATCCAGTCATAAGCCTCAAGTCAGAAATTCAGTGATTGAAATCTTGAATTCAGGATCAAATCGTCTTGCGGCCCTCGTTATTGACATGATGTGTACAGCAATGATAGACGTTGCCAATGAATTTGGACTCCCGACTTATGTTTTCTACACATCTGGTGCTGCCATGCTTGGTCTTCAGCTTCATTTGCAGAGTCTCAGGGATGATTTTAACGAAGATGTGACAGATTACGAGGATGATCCAGAAGCAGAGCTTTCGGTGACAACGTATGGAAACCCATTTCCAGCTAAATGTTTGCCATCTATAGCCTTTGACAAGGATGGTGGTTCCACAATGTACCTTGATCTTTCTAAAAGGCTTCGAGAAGCTAAAGCTATTCTTGTTAACACTTTCTCCGAATTCGAATCTCATGCTGTCAAATCCCTCTCCCTCGATGAGAAAATCCCACTTGTATACCCAGTCGGACCCTTGCTAAACCTTGATAACGATCAGGTTAACAATCAAGATTCTTCTCAGCATCAAACTATAATCAACTGGTTAGATGATCAACCTGATTCATCAGTAGTGTACCTCTGCTTCGGAAGCTTAGGAAGCTTCAACGAGGAGCAAATAAAGGAAATTGCATATGCTCTGGAGAAGAGCGGATGTCGATTCTTGTGGTCCTTAAAGAAGCCTTTGGCTAAAGATACATTTTTTCCAGCTGCTTATGATAATCCAGAGGATGTTTTGCCTGAGGGGTTC-TTGCAAAGGACGGAAGCAA-TTGGGAAGGTGATAGGATGGGCACCCCAG</genome_strand>
        <mrna_strand>CACACTTGAGATGGCAAAGGTCCTAATAGCTAGAGATGAACATCTCGTCATTACAGTCCTCGTAATCAAGCTGCCTTGTGACAACAAACTCAGCTCTTATATTGAATCAGTCTCGACAAACCCAAACTACAACTCTCAAATGAAGTTCATTGAACTCCCTCAAGATGAGTCCATCTTACAGTCAATCACAAACACAACTTTCATCACATTTTTATCCAGTCATAAGCCTCAAGTCAGAAATTCAGTGATTGAAATCTTGAATTCAGGATCAAATCGTCTTGCGGCCCTCGTTATTGACATGATGTGTACAGCAATGATAGACGTTGCCAATGAATTTGGACTCCCGACTTATGTTTTCTACACATCTGGTGCTGCCATGCTTGGTCTTCAGCTTCATTTGCAGAGTCTCAGGGATGATTTTAACGAAGATGTGACAGATTACGAGGATGATCCAGAAGCAGAGCTTTCGGTGACAACGTATGGAAACCCATTTCCAGCTAAATGTTTGCCATCTATAGCCTTTGACAAGGATGGTGGTTCCACAATGTACCTTGATCTTTCTAAAAGGCTTCGAGAAGCTAAAGCTATTCTTGTTAACACTTTCTCCGAATTCGAATCTCATGCTGTCAAATCCCTCTCCCTCGATGAGAAAATCCCACTTGTATACCCAGTCGGACCCTTGCTAAACCTTGATAACGATCAGGTTAACAATCAAGATTCTTCTCAGCATCAAACTATAATCAACTGGTTAGATGATCAACCTGATTCATCAGTAGTGTACCTCTGCTTCGGAAGCTTAGGAAGCTTCAACGAGGAGCAAATAAAGGAAATTGCATATGCTCTGGAGAAGAGCGGATGTCGATTCTTGTGGTCCTTAAAGAAGCCTTTGGCTAAAGATACATTTTTTCCAGCTGCTTATGATAATCCAGAGGATGTTTTGCCTGAGGGGTTCTTTGCAAAGGACGGAAGCAATTTGGGAAGGTGATAGGATGGGCACCCCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>11</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="14434" PGL_stop="12973"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="14434" e_stop="12973"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="14434" e_stop="12973" e_length="1462"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14434" stop="12973"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U327080" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTTTCATCATCTTTGCTTCATGTCTTACTGCGGAGTTAGTTTCCATCAATTTACTTATCCCATTTTCGATGGCTTCTGCTGTTACTATAGCTTGATCTTTATTCCTCTCGCAGTAATCCAAAGTAATCTCCACTGCTACTCCTATCTCTTTCACTAATTGAAACGCGTTAACCTGCTGTTCTGAGTGCAATGGCCATGTCGCTATAGGAACACCATACCATAAGCTTTCAAGTATCGAATTCCATCCACAGTGTGATACGAATCCCCCGATTGCTTCGTGAGACAACACTTTCAATTGTGGAACCCATCCTACCACTTTCCCTTTTTTCTCTGTTCTCTTTAGGAATCCTTCAGGCAAAATTTCTGAATAGCTCGTGTATTCTCCTGGAAATTGAGCGTTGTTGCTCTGAGGTGGACGACGTAAAGACCATAAGAAACGGCAACCAATGTTATCGAGAGCTATAGCGATCTGTTTCACTTGATCCGTTGGTAAACTCCCCTGGCTCCCAAAACAGAGTAGCACCACCGAATTAGGTGGCTGTTTGTCCAGCCAATTTGTTATTTCTGCCTCCTCTGACTCCGACTGTGATTTCGATTGGTTTAAAATTGGACCAATTGGATAGATGGATGGCAGGGGATGAGCTTGCTCAGATCTTGATAGGTTGTTGTTATTGTATGCATCCAAGGCGTATACTTCTAGTTCAGCAAAAGTGTTGATGATGATTCCTTTGGCTTTTCTATACCCACGAGCAAAATCGAGAAATCTCCCTAACCATGTGTCTCTATCGACTAGAACCATTGGCAATACGTTCGTAGGAACAGGGTATGCGTAGCTAGGAAATGATAACAGAGCAGTACCATCATCAGAGTTTTTGAAACTGGAAACATCTCTCGAACACTCATCTTCAAGAAACTGGAAATGAATCATCAACCCAAGAAAAGCAGCAGGGGAAGTGAAAAACACATAGCTCGGGATCCCAAACTCTTCAGCTACATCCATCAATGGAGTGCATAACATGTCTACAACAAATCCAGCAAGTTTAACACCGCCCCGTTGACTTATTAAAAATTCCCTGATTCGAGATTTTTGAGTTTGTACTAATCTGTTAACAAAGTGTCCTCGAGTTTTAGAGCTCCATTCCGGGGTTGGATCAACAGGTGGTAATTCAAAGAATCGAAGACGTTCAGAGGATGATGAATCAATTACAGAGTCGACAAAAGGGCCACTAACAGGGTCGATGTAATCAGGGAGTTTCATAATGAGGACAGTGATTGAGAGTTGATGATTTCGATTGATGAAAAGCTTGGCCAACTCCAACATCTGAGCAACATGGCCCATTGCCGGAGAAGGGATCAGAATCAATTCTGCTAATTTCTCCATAGGATCAAATTGTTTCTTTCAATTCAACTGCTAATGTACTTTCACTAAAATGGAAGAAAGATGTTTACAACAATACATAAA</gDNA_template>
            <first_frame> L  S  S  S  L  L  H  V  L  L  R  S  *  F  P  S  I  Y  L  S  H  F  R  W  L  L  L  L  L  *  L  D  L  Y  S  S  R  S  N  P  K  *  S  P  L  L  L  L  S  L  S  L  I  E  T  R  *  P  A  V  L  S  A  M  A  M  S  L  *  E  H  H  T  I  S  F  Q  V  S  N  S  I  H  S  V  I  R  I  P  R  L  L  R  E  T  T  L  S  I  V  E  P  I  L  P  L  S  L  F  S  L  F  S  L  G  I  L  Q  A  K  F  L  N  S  S  C  I  L  L  E  I  E  R  C  C  S  E  V  D  D  V  K  T  I  R  N  G  N  Q  C  Y  R  E  L  *  R  S  V  S  L  D  P  L  V  N  S  P  G  S  Q  N  R  V  A  P  P  N  *  V  A  V  C  P  A  N  L  L  F  L  P  P  L  T  P  T  V  I  S  I  G  L  K  L  D  Q  L  D  R  W  M  A  G  D  E  L  A  Q  I  L  I  G  C  C  Y  C  M  H  P  R  R  I  L  L  V  Q  Q  K  C  *  *  *  F  L  W  L  F  Y  T  H  E  Q  N  R  E  I  S  L  T  M  C  L  Y  R  L  E  P  L  A  I  R  S  *  E  Q  G  M  R  S  *  E  M  I  T  E  Q  Y  H  H  Q  S  F  *  N  W  K  H  L  S  N  T  H  L  Q  E  T  G  N  E  S  S  T  Q  E  K  Q  Q  G  K  *  K  T  H  S  S  G  S  Q  T  L  Q  L  H  P  S  M  E  C  I  T  C  L  Q  Q  I  Q  Q  V  *  H  R  P  V  D  L  L  K  I  P  *  F  E  I  F  E  F  V  L  I  C  *  Q  S  V  L  E  F  *  S  S  I  P  G  L  D  Q  Q  V  V  I  Q  R  I  E  D  V  Q  R  M  M  N  Q  L  Q  S  R  Q  K  G  H  *  Q  G  R  C  N  Q  G  V  S  *  *  G  Q  *  L  R  V  D  D  F  D  *  *  K  A  W  P  T  P  T  S  E  Q  H  G  P  L  P  E  K  G  S  E  S  I  L  L  I  S  P  *  D  Q  I  V  S  F  N  S  T  A  N  V  L  S  L  K  W  K  K  D  V  Y  N  N  T  *  </first_frame>
            <second_frame>  F  H  H  L  C  F  M  S  Y  C  G  V  S  F  H  Q  F  T  Y  P  I  F  D  G  F  C  C  Y  Y  S  L  I  F  I  P  L  A  V  I  Q  S  N  L  H  C  Y  S  Y  L  F  H  *  L  K  R  V  N  L  L  F  *  V  Q  W  P  C  R  Y  R  N  T  I  P  *  A  F  K  Y  R  I  P  S  T  V  *  Y  E  S  P  D  C  F  V  R  Q  H  F  Q  L  W  N  P  S  Y  H  F  P  F  F  L  C  S  L  *  E  S  F  R  Q  N  F  *  I  A  R  V  F  S  W  K  L  S  V  V  A  L  R  W  T  T  *  R  P  *  E  T  A  T  N  V  I  E  S  Y  S  D  L  F  H  L  I  R  W  *  T  P  L  A  P  K  T  E  *  H  H  R  I  R  W  L  F  V  Q  P  I  C  Y  F  C  L  L  *  L  R  L  *  F  R  L  V  *  N  W  T  N  W  I  D  G  W  Q  G  M  S  L  L  R  S  *  *  V  V  V  I  V  C  I  Q  G  V  Y  F  *  F  S  K  S  V  D  D  D  S  F  G  F  S  I  P  T  S  K  I  E  K  S  P  *  P  C  V  S  I  D  *  N  H  W  Q  Y  V  R  R  N  R  V  C  V  A  R  K  *  *  Q  S  S  T  I  I  R  V  F  E  T  G  N  I  S  R  T  L  I  F  K  K  L  E  M  N  H  Q  P  K  K  S  S  R  G  S  E  K  H  I  A  R  D  P  K  L  F  S  Y  I  H  Q  W  S  A  *  H  V  Y  N  K  S  S  K  F  N  T  A  P  L  T  Y  *  K  F  P  D  S  R  F  L  S  L  Y  *  S  V  N  K  V  S  S  S  F  R  A  P  F  R  G  W  I  N  R  W  *  F  K  E  S  K  T  F  R  G  *  *  I  N  Y  R  V  D  K  R  A  T  N  R  V  D  V  I  R  E  F  H  N  E  D  S  D  *  E  L  M  I  S  I  D  E  K  L  G  Q  L  Q  H  L  S  N  M  A  H  C  R  R  R  D  Q  N  Q  F  C  *  F  L  H  R  I  K  L  F  L  S  I  Q  L  L  M  Y  F  H  *  N  G  R  K  M  F  T  T  I  H  K </second_frame>
            <third_frame>   F  I  I  F  A  S  C  L  T  A  E  L  V  S  I  N  L  L  I  P  F  S  M  A  S  A  V  T  I  A  *  S  L  F  L  S  Q  *  S  K  V  I  S  T  A  T  P  I  S  F  T  N  *  N  A  L  T  C  C  S  E  C  N  G  H  V  A  I  G  T  P  Y  H  K  L  S  S  I  E  F  H  P  Q  C  D  T  N  P  P  I  A  S  *  D  N  T  F  N  C  G  T  H  P  T  T  F  P  F  F  S  V  L  F  R  N  P  S  G  K  I  S  E  *  L  V  Y  S  P  G  N  *  A  L  L  L  *  G  G  R  R  K  D  H  K  K  R  Q  P  M  L  S  R  A  I  A  I  C  F  T  *  S  V  G  K  L  P  W  L  P  K  Q  S  S  T  T  E  L  G  G  C  L  S  S  Q  F  V  I  S  A  S  S  D  S  D  C  D  F  D  W  F  K  I  G  P  I  G  *  M  D  G  R  G  *  A  C  S  D  L  D  R  L  L  L  L  Y  A  S  K  A  Y  T  S  S  S  A  K  V  L  M  M  I  P  L  A  F  L  Y  P  R  A  K  S  R  N  L  P  N  H  V  S  L  S  T  R  T  I  G  N  T  F  V  G  T  G  Y  A  *  L  G  N  D  N  R  A  V  P  S  S  E  F  L  K  L  E  T  S  L  E  H  S  S  S  R  N  W  K  *  I  I  N  P  R  K  A  A  G  E  V  K  N  T  *  L  G  I  P  N  S  S  A  T  S  I  N  G  V  H  N  M  S  T  T  N  P  A  S  L  T  P  P  R  *  L  I  K  N  S  L  I  R  D  F  *  V  C  T  N  L  L  T  K  C  P  R  V  L  E  L  H  S  G  V  G  S  T  G  G  N  S  K  N  R  R  R  S  E  D  D  E  S  I  T  E  S  T  K  G  P  L  T  G  S  M  *  S  G  S  F  I  M  R  T  V  I  E  S  *  *  F  R  L  M  K  S  L  A  N  S  N  I  *  A  T  W  P  I  A  G  E  G  I  R  I  N  S  A  N  F  S  I  G  S  N  C  F  F  Q  F  N  C  *  C  T  F  T  K  M  E  E  R  C  L  Q  Q  Y  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0049C13.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="14227" stop="13970"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EHHTISFQVSNSIHSVIRIPRLLRETTLSIVEPILPLSLFSLFSLGILQAKFLNSSCILLEIERCCSEVDDVKTIRNGNQCYREL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="30020" PGL_stop="27648"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="30020" e_stop="29858"/>
            <exon e_start="29783" e_stop="29714"/>
            <exon e_start="29565" e_stop="29188"/>
            <exon e_start="29120" e_stop="28395"/>
            <exon e_start="28300" e_stop="27648"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.798" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="30020" e_stop="29858" e_length="163"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.992">
            <gDNA_intron_boundary i_start="29857" i_stop="29784" i_length="74"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="29783" e_stop="29714" e_length="70"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.798">
            <gDNA_intron_boundary i_start="29713" i_stop="29566" i_length="148"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="29565" e_stop="29188" e_length="378"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.999">
            <gDNA_intron_boundary i_start="29187" i_stop="29121" i_length="67"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="29120" e_stop="28395" e_length="726"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="28394" i_stop="28301" i_length="94"/>
          </intron>
          <exon e_serial="5" e_score="0.998">
            <gDNA_exon_boundary e_start="28300" e_stop="27648" e_length="653"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30020" stop="29858"/>
              <exon start="29783" stop="29714"/>
              <exon start="29565" stop="29188"/>
              <exon start="29120" stop="28395"/>
              <exon start="28300" stop="27648"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U317317" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GACAGACAAACTTTTCTCTATGTATCTTATATAATAAGACCCCTACTCTTTATTATATCCACATAAAAGTTTTCCGCTCTATGCACTAAAACCAATCTCACATGGCTACTCCTCTCAAAAATACCAATAGACTCTCTCTTGCAATGGAAAGAACTGGCCAATG : GGTATTTTCACAAGAAATTCCAACTGATGTTATTGTTGAAGTAGGTGAAGCAAACTTTAATCTTCACAAG : TTCATGCTAGTAGCAAAGAGCAATTACATAAGGAAACTTATACTTGATACTAAAGAAAGTGATGTAAGTCGTATAAACTTGTCTGATATTCCTGGAGGGCCAGAGATGTTTGAGAAGGCAGCCAAGTTCTGCTATGGAGTTAACTTTGAAATCACAGTACATAACGTTGCTGCTCTTCGTTGTGCTGCTGAATATCTTCAAATGACTGATAAATACTGTGACAACAATCTCGCAAGCAGAACAGAGGATTTTCTAGCTCAAGTTGCCTTGACTAGCCTTTCTGGTGCACTTGTTGTGTTAAAGTCATGTGAAAATCTTCTTCCTCTTGCACATGATCTCAATATCATTCAAAGATGTGTTGACATCGCCGGTGCTAAG : GCGTGTGTGGAGGCGAATTTTCCTAGCAGATCACCACCAAATTGGTGGACGGAAGAGTTAACTATCTTAGATGTAGCTTTTTTCGAGAGAATTATTGTTGCAATGAAAACTCGTGGGGCAAAAGCGTTAACCATAGCAAGTGCCATAATCACATATACAGAGAGATCTCTTCGTGATCTTGTACGTGACCACTCAGGAAACAACACGAGATTAATGGTACCAGAGGATTCGGATATGAGAATGCATCAACGGGAACTTCTAGAGTCGATTGTGACTCTGTTGCCCGCGGAGAGAGCAGCTTTTCCAATCAATTTCTTGTGTTGTCTCCTGCGTACAGCTATTTTCTTAAGAGCAGCCAGTAGCTGCAAGAATGAATTGGAGAAAAGGATATCAGCAATACTAGAACACGTGACAGTCGATGATCTGTTAGTCTTGTCTTTTTCTTACGACGGAGAAAGACTATTCGATCTTGAGAGCGTGAGGAGAATCATTTCCGGATTTATGGAGAAAGAGAAGAGTGTAGCTGTGTTTAAAGGTGGTGATTTTGGAGACGTTTGTACCACCGCTATGCAGAGAGTTGCAAAGACTGTCGATGCTTATCTTGGTGAAATCGCTACATTTGGAGATCTCAGTATATCAAAATTCAATGGAATTGCTATTTTGGTTCCTAAGGGCGCGAGAAAGGCTGATGATGATCTTTATCGAGCTGTTGATATCTACTTGAAG : GCACATCCACATTTGGATGAAATTGAAAGAGAAAAAGTGTGTAGTGTGATGGATCCTTTGAAACTATCACATGAAGCAAGAGTCCATGCTTCTCAAAACAAACGTTTGCCGGTGCAAATAGTCCTTCATGCTCTCTATTTCGATCAACTAAAGATAAGGAGCGGAGCAGCAGATGATAGTAATAACAACATGCCCGAAGCCATGGCAACAAGGAATCAATTACAAGCTGATGTTTCCCTCGTAAAGGAAAATGAAGTTTTGAGAACGGAGTTGCTAAAGATGAAGATGTACATAGCAGATATACAGAAAACAACAAATTCTAGTCAAGGAACATCAAAAGGGAGTCTGAAGAAGACAACATTCTTCTCTTCTGTCTCCAAAACATTAGGCAAATTCAATCCCTTTAAACATGGATCAAAGGACACTTCTAGTATTGTTGATGATGCTGCTCTAGATCTTACTAAGCCTAGGAGAAGAAGATTTTCCATATCTTAAGCTATTTACATTATTTGGTTTAATTTTAGTTTTATGTTGTGTGAAAAAACTATGATTGATTTTGTACTGTAAAGGATTGATTGATTATGTTGTTTGATTATATTGTTATGTTAATATATTCATGTATCACACTTGATCAAGATTGATTTCATCTTTTT</gDNA_template>
            <first_frame> D  R  Q  T  F  L  Y  V  S  Y  I  I  R  P  L  L  F  I  I  S  T  *  K  F  S  A  L  C  T  K  T  N  L  T  W  L  L  L  S  K  I  P  I  D  S  L  L  Q  W  K  E  L  A  N   : G  Y  F  H  K  K  F  Q  L  M  L  L  L  K  *  V  K  Q  T  L  I  F  T  S :   S  C  *  *  Q  R  A  I  T  *  G  N  L  Y  L  I  L  K  K  V  M  *  V  V  *  T  C  L  I  F  L  E  G  Q  R  C  L  R  R  Q  P  S  S  A  M  E  L  T  L  K  S  Q  Y  I  T  L  L  L  F  V  V  L  L  N  I  F  K  *  L  I  N  T  V  T  T  I  S  Q  A  E  Q  R  I  F  *  L  K  L  P  *  L  A  F  L  V  H  L  L  C  *  S  H  V  K  I  F  F  L  L  H  M  I  S  I  S  F  K  D  V  L  T  S  P  V  L  R :   R  V  W  R  R  I  F  L  A  D  H  H  Q  I  G  G  R  K  S  *  L  S  *  M  *  L  F  S  R  E  L  L  L  Q  *  K  L  V  G  Q  K  R  *  P  *  Q  V  P  *  S  H  I  Q  R  D  L  F  V  I  L  Y  V  T  T  Q  E  T  T  R  D  *  W  Y  Q  R  I  R  I  *  E  C  I  N  G  N  F  *  S  R  L  *  L  C  C  P  R  R  E  Q  L  F  Q  S  I  S  C  V  V  S  C  V  Q  L  F  S  *  E  Q  P  V  A  A  R  M  N  W  R  K  G  Y  Q  Q  Y  *  N  T  *  Q  S  M  I  C  *  S  C  L  F  L  T  T  E  K  D  Y  S  I  L  R  A  *  G  E  S  F  P  D  L  W  R  K  R  R  V  *  L  C  L  K  V  V  I  L  E  T  F  V  P  P  L  C  R  E  L  Q  R  L  S  M  L  I  L  V  K  S  L  H  L  E  I  S  V  Y  Q  N  S  M  E  L  L  F  W  F  L  R  A  R  E  R  L  M  M  I  F  I  E  L  L  I  S  T  *  R :   H  I  H  I  W  M  K  L  K  E  K  K  C  V  V  *  W  I  L  *  N  Y  H  M  K  Q  E  S  M  L  L  K  T  N  V  C  R  C  K  *  S  F  M  L  S  I  S  I  N  *  R  *  G  A  E  Q  Q  M  I  V  I  T  T  C  P  K  P  W  Q  Q  G  I  N  Y  K  L  M  F  P  S  *  R  K  M  K  F  *  E  R  S  C  *  R  *  R  C  T  *  Q  I  Y  R  K  Q  Q  I  L  V  K  E  H  Q  K  G  V  *  R  R  Q  H  S  S  L  L  S  P  K  H  *  A  N  S  I  P  L  N  M  D  Q  R  T  L  L  V  L  L  M  M  L  L  *  I  L  L  S  L  G  E  E  D  F  P  Y  L  K  L  F  T  L  F  G  L  I  L  V  L  C  C  V  K  K  L  *  L  I  L  Y  C  K  G  L  I  D  Y  V  V  *  L  Y  C  Y  V  N  I  F  M  Y  H  T  *  S  R  L  I  S  S  F  </first_frame>
            <second_frame>  T  D  K  L  F  S  M  Y  L  I  *  *  D  P  Y  S  L  L  Y  P  H  K  S  F  P  L  Y  A  L  K  P  I  S  H  G  Y  S  S  Q  K  Y  Q  *  T  L  S  C  N  G  K  N  W  P  M  :  G  I  F  T  R  N  S  N  *  C  Y  C  *  S  R  *  S  K  L  *  S  S  Q   : V  H  A  S  S  K  E  Q  L  H  K  E  T  Y  T  *  Y  *  R  K  *  C  K  S  Y  K  L  V  *  Y  S  W  R  A  R  D  V  *  E  G  S  Q  V  L  L  W  S  *  L  *  N  H  S  T  *  R  C  C  S  S  L  C  C  *  I  S  S  N  D  *  *  I  L  *  Q  Q  S  R  K  Q  N  R  G  F  S  S  S  S  C  L  D  *  P  F  W  C  T  C  C  V  K  V  M  *  K  S  S  S  S  C  T  *  S  Q  Y  H  S  K  M  C  *  H  R  R  C  *   : G  V  C  G  G  E  F  S  *  Q  I  T  T  K  L  V  D  G  R  V  N  Y  L  R  C  S  F  F  R  E  N  Y  C  C  N  E  N  S  W  G  K  S  V  N  H  S  K  C  H  N  H  I  Y  R  E  I  S  S  *  S  C  T  *  P  L  R  K  Q  H  E  I  N  G  T  R  G  F  G  Y  E  N  A  S  T  G  T  S  R  V  D  C  D  S  V  A  R  G  E  S  S  F  S  N  Q  F  L  V  L  S  P  A  Y  S  Y  F  L  K  S  S  Q  *  L  Q  E  *  I  G  E  K  D  I  S  N  T  R  T  R  D  S  R  *  S  V  S  L  V  F  F  L  R  R  R  K  T  I  R  S  *  E  R  E  E  N  H  F  R  I  Y  G  E  R  E  E  C  S  C  V  *  R  W  *  F  W  R  R  L  Y  H  R  Y  A  E  S  C  K  D  C  R  C  L  S  W  *  N  R  Y  I  W  R  S  Q  Y  I  K  I  Q  W  N  C  Y  F  G  S  *  G  R  E  K  G  *  *  *  S  L  S  S  C  *  Y  L  L  E   : G  T  S  T  F  G  *  N  *  K  R  K  S  V  *  C  D  G  S  F  E  T  I  T  *  S  K  S  P  C  F  S  K  Q  T  F  A  G  A  N  S  P  S  C  S  L  F  R  S  T  K  D  K  E  R  S  S  R  *  *  *  *  Q  H  A  R  S  H  G  N  K  E  S  I  T  S  *  C  F  P  R  K  G  K  *  S  F  E  N  G  V  A  K  D  E  D  V  H  S  R  Y  T  E  N  N  K  F  *  S  R  N  I  K  R  E  S  E  E  D  N  I  L  L  F  C  L  Q  N  I  R  Q  I  Q  S  L  *  T  W  I  K  G  H  F  *  Y  C  *  *  C  C  S  R  S  Y  *  A  *  E  K  K  I  F  H  I  L  S  Y  L  H  Y  L  V  *  F  *  F  Y  V  V  *  K  N  Y  D  *  F  C  T  V  K  D  *  L  I  M  L  F  D  Y  I  V  M  L  I  Y  S  C  I  T  L  D  Q  D  *  F  H  L  F </second_frame>
            <third_frame>   Q  T  N  F  S  L  C  I  L  Y  N  K  T  P  T  L  Y  Y  I  H  I  K  V  F  R  S  M  H  *  N  Q  S  H  M  A  T  P  L  K  N  T  N  R  L  S  L  A  M  E  R  T  G  Q  W :   V  F  S  Q  E  I  P  T  D  V  I  V  E  V  G  E  A  N  F  N  L  H  K  :  F  M  L  V  A  K  S  N  Y  I  R  K  L  I  L  D  T  K  E  S  D  V  S  R  I  N  L  S  D  I  P  G  G  P  E  M  F  E  K  A  A  K  F  C  Y  G  V  N  F  E  I  T  V  H  N  V  A  A  L  R  C  A  A  E  Y  L  Q  M  T  D  K  Y  C  D  N  N  L  A  S  R  T  E  D  F  L  A  Q  V  A  L  T  S  L  S  G  A  L  V  V  L  K  S  C  E  N  L  L  P  L  A  H  D  L  N  I  I  Q  R  C  V  D  I  A  G  A  K  :  A  C  V  E  A  N  F  P  S  R  S  P  P  N  W  W  T  E  E  L  T  I  L  D  V  A  F  F  E  R  I  I  V  A  M  K  T  R  G  A  K  A  L  T  I  A  S  A  I  I  T  Y  T  E  R  S  L  R  D  L  V  R  D  H  S  G  N  N  T  R  L  M  V  P  E  D  S  D  M  R  M  H  Q  R  E  L  L  E  S  I  V  T  L  L  P  A  E  R  A  A  F  P  I  N  F  L  C  C  L  L  R  T  A  I  F  L  R  A  A  S  S  C  K  N  E  L  E  K  R  I  S  A  I  L  E  H  V  T  V  D  D  L  L  V  L  S  F  S  Y  D  G  E  R  L  F  D  L  E  S  V  R  R  I  I  S  G  F  M  E  K  E  K  S  V  A  V  F  K  G  G  D  F  G  D  V  C  T  T  A  M  Q  R  V  A  K  T  V  D  A  Y  L  G  E  I  A  T  F  G  D  L  S  I  S  K  F  N  G  I  A  I  L  V  P  K  G  A  R  K  A  D  D  D  L  Y  R  A  V  D  I  Y  L  K  :  A  H  P  H  L  D  E  I  E  R  E  K  V  C  S  V  M  D  P  L  K  L  S  H  E  A  R  V  H  A  S  Q  N  K  R  L  P  V  Q  I  V  L  H  A  L  Y  F  D  Q  L  K  I  R  S  G  A  A  D  D  S  N  N  N  M  P  E  A  M  A  T  R  N  Q  L  Q  A  D  V  S  L  V  K  E  N  E  V  L  R  T  E  L  L  K  M  K  M  Y  I  A  D  I  Q  K  T  T  N  S  S  Q  G  T  S  K  G  S  L  K  K  T  T  F  F  S  S  V  S  K  T  L  G  K  F  N  P  F  K  H  G  S  K  D  T  S  S  I  V  D  D  A  A  L  D  L  T  K  P  R  R  R  R  F  S  I  S  *  A  I  Y  I  I  W  F  N  F  S  F  M  L  C  E  K  T  M  I  D  F  V  L  *  R  I  D  *  L  C  C  L  I  I  L  L  C  *  Y  I  H  V  S  H  L  I  K  I  D  F  I  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0049C13.2" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29931" stop="29858"/>
                    <exon start="29783" stop="29714"/>
                    <exon start="29565" stop="29188"/>
                    <exon start="29120" stop="28395"/>
                    <exon start="28300" stop="27806"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1740</number_coding_nucleotides>
                  <number_encoded_amino_acids>580</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NQSHMATPLKNTNRLSLAMERTGQWVFSQEIPTDVIVEVGEANFNLHKFMLVAKSNYIRKLILDTKESDVSRINLSDIPGGPEMFEKAAKFCYGVNFEITVHNVAALRCAAEYLQMTDKYCDNNLASRTEDFLAQVALTSLSGALVVLKSCENLLPLAHDLNIIQRCVDIAGAKACVEANFPSRSPPNWWTEELTILDVAFFERIIVAMKTRGAKALTIASAIITYTERSLRDLVRDHSGNNTRLMVPEDSDMRMHQRELLESIVTLLPAERAAFPINFLCCLLRTAIFLRAASSCKNELEKRISAILEHVTVDDLLVLSFSYDGERLFDLESVRRIISGFMEKEKSVAVFKGGDFGDVCTTAMQRVAKTVDAYLGEIATFGDLSISKFNGIAILVPKGARKADDDLYRAVDIYLKAHPHLDEIEREKVCSVMDPLKLSHEARVHASQNKRLPVQIVLHALYFDQLKIRSGAADDSNNNMPEAMATRNQLQADVSLVKENEVLRTELLKMKMYIADIQKTTNSSQGTSKGSLKKTTFFSSVSKTLGKFNPFKHGSKDTSSIVDDAALDLTKPRRRRFSIS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="28607" e_stop="28395"/>
            <exon e_start="28300" e_stop="28159"/>
            <exon e_start="28086" e_stop="27803"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="28607" e_stop="28395" e_length="213"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="28394" i_stop="28301" i_length="94"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="28300" e_stop="28159" e_length="142"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="28158" i_stop="28087" i_length="72"/>
          </intron>
          <exon e_serial="3" e_score="0.986">
            <gDNA_exon_boundary e_start="28086" e_stop="27803" e_length="284"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28607" stop="28395"/>
              <exon start="28300" stop="28159"/>
              <exon start="28086" stop="27803"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U336045" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGAGTGTAGCTGTGTTTAAAGGTGGTGATTTTGGAGACGTTTGTACCACCGCTATGCAGAGAGTTGCAAAGACTGTCGATGCTTATCTTGGTGAAATCGCTACATTTGGAGATCTCAGTATATCAAAATTCAATGGAATTGCTATTTTGGTTCCTAAGGGCGCGAGAAAGGCTGATGATGATCTTTATCGAGCTGTTGATATCTACTTGAAG : GCACATCCACATTTGGATGAAATTGAAAGAGAAAAAGTGTGTAGTGTGATGGATCCTTTGAAACTATCACATGAAGCAAGAGTCCATGCTTCTCAAAACAAACGTTTGCCGGTGCAAATAGTCCTTCATGCTCTCTATTTCG : ATCAATTACAAGCTGATGTTTCCCTCGTAAAGGAAAATGAAGTTTTGAGAACGGAGTTGCTAAAGATGAAGATGTACATAGCAGATATACAGAAAACAACAAATTCTAGTCAAGGAACATCAAAAGGGAGTCTGAAGAAGACAACATTCTTCTCTTCTGTCTCCAAAACATTAGGCAAATTCAATCCCTTTAAACATGGATCAAAGGACACTTCTAGTATTGTTGATGATGCTGCTCTAGATCTTACTAAGCCTAGGAGAAGAAGATTTTCCATATCTTAAGCT</gDNA_template>
            <first_frame> K  S  V  A  V  F  K  G  G  D  F  G  D  V  C  T  T  A  M  Q  R  V  A  K  T  V  D  A  Y  L  G  E  I  A  T  F  G  D  L  S  I  S  K  F  N  G  I  A  I  L  V  P  K  G  A  R  K  A  D  D  D  L  Y  R  A  V  D  I  Y  L  K  :  A  H  P  H  L  D  E  I  E  R  E  K  V  C  S  V  M  D  P  L  K  L  S  H  E  A  R  V  H  A  S  Q  N  K  R  L  P  V  Q  I  V  L  H  A  L  Y  F   : D  Q  L  Q  A  D  V  S  L  V  K  E  N  E  V  L  R  T  E  L  L  K  M  K  M  Y  I  A  D  I  Q  K  T  T  N  S  S  Q  G  T  S  K  G  S  L  K  K  T  T  F  F  S  S  V  S  K  T  L  G  K  F  N  P  F  K  H  G  S  K  D  T  S  S  I  V  D  D  A  A  L  D  L  T  K  P  R  R  R  R  F  S  I  S  *  A </first_frame>
            <second_frame>  R  V  *  L  C  L  K  V  V  I  L  E  T  F  V  P  P  L  C  R  E  L  Q  R  L  S  M  L  I  L  V  K  S  L  H  L  E  I  S  V  Y  Q  N  S  M  E  L  L  F  W  F  L  R  A  R  E  R  L  M  M  I  F  I  E  L  L  I  S  T  *  R :   H  I  H  I  W  M  K  L  K  E  K  K  C  V  V  *  W  I  L  *  N  Y  H  M  K  Q  E  S  M  L  L  K  T  N  V  C  R  C  K  *  S  F  M  L  S  I  S  :  I  N  Y  K  L  M  F  P  S  *  R  K  M  K  F  *  E  R  S  C  *  R  *  R  C  T  *  Q  I  Y  R  K  Q  Q  I  L  V  K  E  H  Q  K  G  V  *  R  R  Q  H  S  S  L  L  S  P  K  H  *  A  N  S  I  P  L  N  M  D  Q  R  T  L  L  V  L  L  M  M  L  L  *  I  L  L  S  L  G  E  E  D  F  P  Y  L  K   </second_frame>
            <third_frame>   E  C  S  C  V  *  R  W  *  F  W  R  R  L  Y  H  R  Y  A  E  S  C  K  D  C  R  C  L  S  W  *  N  R  Y  I  W  R  S  Q  Y  I  K  I  Q  W  N  C  Y  F  G  S  *  G  R  E  K  G  *  *  *  S  L  S  S  C  *  Y  L  L  E   : G  T  S  T  F  G  *  N  *  K  R  K  S  V  *  C  D  G  S  F  E  T  I  T  *  S  K  S  P  C  F  S  K  Q  T  F  A  G  A  N  S  P  S  C  S  L  F  R :   S  I  T  S  *  C  F  P  R  K  G  K  *  S  F  E  N  G  V  A  K  D  E  D  V  H  S  R  Y  T  E  N  N  K  F  *  S  R  N  I  K  R  E  S  E  E  D  N  I  L  L  F  C  L  Q  N  I  R  Q  I  Q  S  L  *  T  W  I  K  G  H  F  *  Y  C  *  *  C  C  S  R  S  Y  *  A  *  E  K  K  I  F  H  I  L  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0049C13.2" strand="-"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28607" stop="28395"/>
                    <exon start="28300" stop="28159"/>
                    <exon start="28086" stop="27806"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>633</number_coding_nucleotides>
                  <number_encoded_amino_acids>211</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KSVAVFKGGDFGDVCTTAMQRVAKTVDAYLGEIATFGDLSISKFNGIAILVPKGARKADDDLYRAVDIYLKAHPHLDEIEREKVCSVMDPLKLSHEARVHASQNKRLPVQIVLHALYFDQLQADVSLVKENEVLRTELLKMKMYIADIQKTTNSSQGTSKGSLKKTTFFSSVSKTLGKFNPFKHGSKDTSSIVDDAALDLTKPRRRRFSIS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="62861" PGL_stop="63955"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="62861" e_stop="63955"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.962"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.962">
            <gDNA_exon_boundary e_start="62861" e_stop="63955" e_length="1095"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62861" stop="63955"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U322792" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAGAGTCTATGATATGCCGGAAGCGTAATAGACCAATCGATTCCAAATATAAAATTCCTTGTAGAAGGAAGGAGCAAATGATCAATATGGTCATGATAATGAGGCAAGTGCTATAAAAGAGCACATTGACATAACACTTCATAAAATCTTGAAAAAGGTTCAGGTACCTGAAATAATGAAAAATGAAGAGATCTCGATAAGTTATGTCTTGTTGGAATCGATATCAAATAACCGTCGACGGTATCTTTGATATGAGGTAGCGCTCAATGATATAATTGTGATGAGGATCTTGAATTCAAATCTGTCATATAGTGAGGACAGATAAATGGTTGGCCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGGTAGTCCATAAATCAAGATATAATGTCAGTGGGGTACAAATAAATTATTATGCGATAGTATAACCGTAAGATATCAAATACGGTTTGTGCCTTGGGGCATAAAGGTTTATCGCAAAAATCCTGACATTAGTGGAGATGTTTTCTCCTTTGGTGGATGAAATGAGGTTTGTTTTGATCTGGCAACATATGAAAACTTGAATGCATGTAAATGAATAATTGTAATGTCTAGCTAGACAATGAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAGCATATAAGAGTTTGAAAGAAACTTATCCAATAAAGCTTCAAGAATTCTTATATGGATTGAAATAGTCAAGGAAGAAAAAGGGTACAAAAGAATGACCCTAATTGTCCTTGTATTTTTATGAAAAGGCCTTGGTAAGACAAAATTTTGTCTTGACCTACAGATTGTTAATTTGACAAATAAAATATTTGTCTAACGGTGCACATACACTGAAAAATTTTGATGCAATTTTATGTGGATATATCGCATTCATTGAGTACCCCAATGATTATGAGATCACTTGACATAAATGATGATTCAGTTTGATCTCAAAAGAAGGATGAGAGTTTCTTGGTGATGAAACTTTATCTTGGTGCAATCAGGGCACTAGGGCATCTTACTAACAATATTATTCCAGATATTTGTTTTGCAGTAAATTTACT</gDNA_template>
            <first_frame> Q  S  L  *  Y  A  G  S  V  I  D  Q  S  I  P  N  I  K  F  L  V  E  G  R  S  K  *  S  I  W  S  *  *  *  G  K  C  Y  K  R  A  H  *  H  N  T  S  *  N  L  E  K  G  S  G  T  *  N  N  E  K  *  R  D  L  D  K  L  C  L  V  G  I  D  I  K  *  P  S  T  V  S  L  I  *  G  S  A  Q  *  Y  N  C  D  E  D  L  E  F  K  S  V  I  *  *  G  Q  I  N  G  W  P  S  K  M  H  N  S  S  I  F  C  F  T  *  K  S  D  I  L  D  W  *  S  I  N  Q  D  I  M  S  V  G  Y  K  *  I  I  M  R  *  Y  N  R  K  I  S  N  T  V  C  A  L  G  H  K  G  L  S  Q  K  S  *  H  *  W  R  C  F  L  L  W  W  M  K  *  G  L  F  *  S  G  N  I  *  K  L  E  C  M  *  M  N  N  C  N  V  *  L  D  N  E  G  Y  M  K  I  L  E  T  I  E  V  S  E  A  Y  K  S  L  K  E  T  Y  P  I  K  L  Q  E  F  L  Y  G  L  K  *  S  R  K  K  K  G  T  K  E  *  P  *  L  S  L  Y  F  Y  E  K  A  L  V  R  Q  N  F  V  L  T  Y  R  L  L  I  *  Q  I  K  Y  L  S  N  G  A  H  T  L  K  N  F  D  A  I  L  C  G  Y  I  A  F  I  E  Y  P  N  D  Y  E  I  T  *  H  K  *  *  F  S  L  I  S  K  E  G  *  E  F  L  G  D  E  T  L  S  W  C  N  Q  G  T  R  A  S  Y  *  Q  Y  Y  S  R  Y  L  F  C  S  K  F  T </first_frame>
            <second_frame>  R  V  Y  D  M  P  E  A  *  *  T  N  R  F  Q  I  *  N  S  L  *  K  E  G  A  N  D  Q  Y  G  H  D  N  E  A  S  A  I  K  E  H  I  D  I  T  L  H  K  I  L  K  K  V  Q  V  P  E  I  M  K  N  E  E  I  S  I  S  Y  V  L  L  E  S  I  S  N  N  R  R  R  Y  L  *  Y  E  V  A  L  N  D  I  I  V  M  R  I  L  N  S  N  L  S  Y  S  E  D  R  *  M  V  G  Q  V  K  C  T  I  Q  V  Y  F  V  S  L  R  K  V  T  F  W  T  G  S  P  *  I  K  I  *  C  Q  W  G  T  N  K  L  L  C  D  S  I  T  V  R  Y  Q  I  R  F  V  P  W  G  I  K  V  Y  R  K  N  P  D  I  S  G  D  V  F  S  F  G  G  *  N  E  V  C  F  D  L  A  T  Y  E  N  L  N  A  C  K  *  I  I  V  M  S  S  *  T  M  K  V  I  *  K  S  L  K  Q  S  R  C  L  K  H  I  R  V  *  K  K  L  I  Q  *  S  F  K  N  S  Y  M  D  *  N  S  Q  G  R  K  R  V  Q  K  N  D  P  N  C  P  C  I  F  M  K  R  P  W  *  D  K  I  L  S  *  P  T  D  C  *  F  D  K  *  N  I  C  L  T  V  H  I  H  *  K  I  L  M  Q  F  Y  V  D  I  S  H  S  L  S  T  P  M  I  M  R  S  L  D  I  N  D  D  S  V  *  S  Q  K  K  D  E  S  F  L  V  M  K  L  Y  L  G  A  I  R  A  L  G  H  L  T  N  N  I  I  P  D  I  C  F  A  V  N  L   </second_frame>
            <third_frame>   E  S  M  I  C  R  K  R  N  R  P  I  D  S  K  Y  K  I  P  C  R  R  K  E  Q  M  I  N  M  V  M  I  M  R  Q  V  L  *  K  S  T  L  T  *  H  F  I  K  S  *  K  R  F  R  Y  L  K  *  *  K  M  K  R  S  R  *  V  M  S  C  W  N  R  Y  Q  I  T  V  D  G  I  F  D  M  R  *  R  S  M  I  *  L  *  *  G  S  *  I  Q  I  C  H  I  V  R  T  D  K  W  L  A  K  *  N  A  Q  F  K  Y  I  L  F  H  L  E  K  *  H  F  G  L  V  V  H  K  S  R  Y  N  V  S  G  V  Q  I  N  Y  Y  A  I  V  *  P  *  D  I  K  Y  G  L  C  L  G  A  *  R  F  I  A  K  I  L  T  L  V  E  M  F  S  P  L  V  D  E  M  R  F  V  L  I  W  Q  H  M  K  T  *  M  H  V  N  E  *  L  *  C  L  A  R  Q  *  R  L  Y  E  N  P  *  N  N  R  G  V  *  S  I  *  E  F  E  R  N  L  S  N  K  A  S  R  I  L  I  W  I  E  I  V  K  E  E  K  G  Y  K  R  M  T  L  I  V  L  V  F  L  *  K  G  L  G  K  T  K  F  C  L  D  L  Q  I  V  N  L  T  N  K  I  F  V  *  R  C  T  Y  T  E  K  F  *  C  N  F  M  W  I  Y  R  I  H  *  V  P  Q  *  L  *  D  H  L  T  *  M  M  I  Q  F  D  L  K  R  R  M  R  V  S  W  *  *  N  F  I  L  V  Q  S  G  H  *  G  I  L  L  T  I  L  F  Q  I  F  V  L  Q  *  I  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0049C13.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="74406" PGL_stop="74971"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="74406" e_stop="74971"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="74406" e_stop="74971" e_length="566"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74406" stop="74971"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U330310" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACAAATTTGTTAACAGAAATACAAAGAAAATACCTCAATGAGGACGAAAGCAGAGCTTGTTTTCATTCCTTCTCCGGCAGCAGGTCACCTCATCTCTGCCGTTGAAATTGCAAAACTGATTCTCAACAGAGATGAGAGGCTCTGTATCTCTATCCTCATTATGAAGCTTCCAATGGATTTCGGTGTTCAATCTTACATCGAATCACTCTCATCTATACCCCGTTTGCAGTTCGTTGACATCACTGTTGACGAAAATACTATTGCTGGATTCATGTCAAATAAGGAGACCTTCTTCACGAACTTCGTTCGAAGTCATAAACCAAAAGTAAAAGATTTTTTAAATAACTCCAGCTTTTCTAGATCTGATTCTCGTCTTGCTGGCTTCGTTCTCGACATGTTCTGCACGTCAATGATAGACGTAGCTAATGAATTTTGTGTTCCTAGTTACATTTTCTTCACCTCAAATGCTGCTTTCCTTGCCCTCTGTTTTCATTTCGAGTCTCTGAAAAAGGAGCATCACGTCGATACCTCCAAATGCAAAAATTCAAATGAAGAATTAACAATCC</gDNA_template>
            <first_frame> T  N  L  L  T  E  I  Q  R  K  Y  L  N  E  D  E  S  R  A  C  F  H  S  F  S  G  S  R  S  P  H  L  C  R  *  N  C  K  T  D  S  Q  Q  R  *  E  A  L  Y  L  Y  P  H  Y  E  A  S  N  G  F  R  C  S  I  L  H  R  I  T  L  I  Y  T  P  F  A  V  R  *  H  H  C  *  R  K  Y  Y  C  W  I  H  V  K  *  G  D  L  L  H  E  L  R  S  K  S  *  T  K  S  K  R  F  F  K  *  L  Q  L  F  *  I  *  F  S  S  C  W  L  R  S  R  H  V  L  H  V  N  D  R  R  S  *  *  I  L  C  S  *  L  H  F  L  H  L  K  C  C  F  P  C  P  L  F  S  F  R  V  S  E  K  G  A  S  R  R  Y  L  Q  M  Q  K  F  K  *  R  I  N  N   </first_frame>
            <second_frame>  Q  I  C  *  Q  K  Y  K  E  N  T  S  M  R  T  K  A  E  L  V  F  I  P  S  P  A  A  G  H  L  I  S  A  V  E  I  A  K  L  I  L  N  R  D  E  R  L  C  I  S  I  L  I  M  K  L  P  M  D  F  G  V  Q  S  Y  I  E  S  L  S  S  I  P  R  L  Q  F  V  D  I  T  V  D  E  N  T  I  A  G  F  M  S  N  K  E  T  F  F  T  N  F  V  R  S  H  K  P  K  V  K  D  F  L  N  N  S  S  F  S  R  S  D  S  R  L  A  G  F  V  L  D  M  F  C  T  S  M  I  D  V  A  N  E  F  C  V  P  S  Y  I  F  F  T  S  N  A  A  F  L  A  L  C  F  H  F  E  S  L  K  K  E  H  H  V  D  T  S  K  C  K  N  S  N  E  E  L  T  I  </second_frame>
            <third_frame>   K  F  V  N  R  N  T  K  K  I  P  Q  *  G  R  K  Q  S  L  F  S  F  L  L  R  Q  Q  V  T  S  S  L  P  L  K  L  Q  N  *  F  S  T  E  M  R  G  S  V  S  L  S  S  L  *  S  F  Q  W  I  S  V  F  N  L  T  S  N  H  S  H  L  Y  P  V  C  S  S  L  T  S  L  L  T  K  I  L  L  L  D  S  C  Q  I  R  R  P  S  S  R  T  S  F  E  V  I  N  Q  K  *  K  I  F  *  I  T  P  A  F  L  D  L  I  L  V  L  L  A  S  F  S  T  C  S  A  R  Q  *  *  T  *  L  M  N  F  V  F  L  V  T  F  S  S  P  Q  M  L  L  S  L  P  S  V  F  I  S  S  L  *  K  R  S  I  T  S  I  P  P  N  A  K  I  Q  M  K  N  *  Q  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0049C13.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="74419" stop="74970"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>552</number_coding_nucleotides>
                  <number_encoded_amino_acids>184</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QKYKENTSMRTKAELVFIPSPAAGHLISAVEIAKLILNRDERLCISILIMKLPMDFGVQSYIESLSSIPRLQFVDITVDENTIAGFMSNKETFFTNFVRSHKPKVKDFLNNSSFSRSDSRLAGFVLDMFCTSMIDVANEFCVPSYIFFTSNAAFLALCFHFESLKKEHHVDTSKCKNSNEELTI</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="82159" PGL_stop="81573"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="82159" e_stop="81573"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.911"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.911">
            <gDNA_exon_boundary e_start="82159" e_stop="81573" e_length="587"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82159" stop="81573"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U342484" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCTGTATCATCCAGGAAAGGCCAATGTTGTGGCCGATGCTCTGAGTAGGAAGACTCCTAGCATGGGGAGTCTTGCAGTGCTTAGTATTATGGAGAGACCATTGGCTAGAGATGTGCAGATATTAGCTAACAGTCTTGTCCGCTTGCAGATTTCAGAAGAGAGTGATGGGATGATTGCTTTTATTGAGGCTCGATCTTCTTTAGTCGAGCAAATCCGTGCACACCAGTTTGATGATGAAAAATTATGTCTCATTCGTGACAAAGTATTGAGAGGAGAAGCTAAGGAGGCTGTCCTTGATTCTGATGGTGTATTGCGGATCGGAGGCAAAATTTGTGTGCCCAAGACAGGAGATTTGATTAGATTGATTCTTGAGGAGGCCCATTGTTCTCGGTATTCCATCCATCCGGGAGCGGCGAAGATGTATCATGATCTGAGTCAGCATTATTGTGGTGTGGGATGAAGAGAGATATTTCAGACTTTGTTTCGAGGTGTTTGACTTGCCAGCAGGTCAAGTGTGAGCACCAGCGGCCCGGGGGTGTATCTCAGAGGATGGCTATTCCTACTTGGAAGTGGGAGCGGATTACTA</gDNA_template>
            <first_frame> F  C  I  I  Q  E  R  P  M  L  W  P  M  L  *  V  G  R  L  L  A  W  G  V  L  Q  C  L  V  L  W  R  D  H  W  L  E  M  C  R  Y  *  L  T  V  L  S  A  C  R  F  Q  K  R  V  M  G  *  L  L  L  L  R  L  D  L  L  *  S  S  K  S  V  H  T  S  L  M  M  K  N  Y  V  S  F  V  T  K  Y  *  E  E  K  L  R  R  L  S  L  I  L  M  V  Y  C  G  S  E  A  K  F  V  C  P  R  Q  E  I  *  L  D  *  F  L  R  R  P  I  V  L  G  I  P  S  I  R  E  R  R  R  C  I  M  I  *  V  S  I  I  V  V  W  D  E  E  R  Y  F  R  L  C  F  E  V  F  D  L  P  A  G  Q  V  *  A  P  A  A  R  G  C  I  S  E  D  G  Y  S  Y  L  E  V  G  A  D  Y   </first_frame>
            <second_frame>  S  V  S  S  R  K  G  Q  C  C  G  R  C  S  E  *  E  D  S  *  H  G  E  S  C  S  A  *  Y  Y  G  E  T  I  G  *  R  C  A  D  I  S  *  Q  S  C  P  L  A  D  F  R  R  E  *  W  D  D  C  F  Y  *  G  S  I  F  F  S  R  A  N  P  C  T  P  V  *  *  *  K  I  M  S  H  S  *  Q  S  I  E  R  R  S  *  G  G  C  P  *  F  *  W  C  I  A  D  R  R  Q  N  L  C  A  Q  D  R  R  F  D  *  I  D  S  *  G  G  P  L  F  S  V  F  H  P  S  G  S  G  E  D  V  S  *  S  E  S  A  L  L  W  C  G  M  K  R  D  I  S  D  F  V  S  R  C  L  T  C  Q  Q  V  K  C  E  H  Q  R  P  G  G  V  S  Q  R  M  A  I  P  T  W  K  W  E  R  I  T  </second_frame>
            <third_frame>   L  Y  H  P  G  K  A  N  V  V  A  D  A  L  S  R  K  T  P  S  M  G  S  L  A  V  L  S  I  M  E  R  P  L  A  R  D  V  Q  I  L  A  N  S  L  V  R  L  Q  I  S  E  E  S  D  G  M  I  A  F  I  E  A  R  S  S  L  V  E  Q  I  R  A  H  Q  F  D  D  E  K  L  C  L  I  R  D  K  V  L  R  G  E  A  K  E  A  V  L  D  S  D  G  V  L  R  I  G  G  K  I  C  V  P  K  T  G  D  L  I  R  L  I  L  E  E  A  H  C  S  R  Y  S  I  H  P  G  A  A  K  M  Y  H  D  L  S  Q  H  Y  C  G  V  G  *  R  E  I  F  Q  T  L  F  R  G  V  *  L  A  S  R  S  S  V  S  T  S  G  P  G  V  Y  L  R  G  W  L  F  L  L  G  S  G  S  G  L  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0049C13.2" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82157" stop="81699"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>456</number_coding_nucleotides>
                  <number_encoded_amino_acids>152</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LYHPGKANVVADALSRKTPSMGSLAVLSIMERPLARDVQILANSLVRLQISEESDGMIAFIEARSSLVEQIRAHQFDDEKLCLIRDKVLRGEAKEAVLDSDGVLRIGGKICVPKTGDLIRLILEEAHCSRYSIHPGAAKMYHDLSQHYCGVG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="84401" PGL_stop="83973"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="84401" e_stop="83973"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.935"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.935">
            <gDNA_exon_boundary e_start="84401" e_stop="83973" e_length="429"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84401" stop="83973"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U339521" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTTGAGGTTTGAGAGTCTGAGACAGGATGGTTTCGGTTACAGAGTATGAGGCGCGTTTTTGCCAGTTGTCTAGGCATGCATTGGCCATTATTCCAAATGAGACAGAGAGGATCCGCAGATTTGTGAGGGGATTGACTTTCTCTATCAGGTCAGCTGTGTTTCGGACATGTAGGGAGGGGACTTCTTTCCAGTCTATTGTGAGCGTCGCCAAAGAGGCGAAATTGATGGAGAGAGAGAAGTTTGGGGACCCTAAAAGAGCTCGTATATATCAGGTCAGTTTCAGGGTGCCTCATCTAGAGGTAGGGGATCACAGAGAGTGAGTGGTTCTTTTCAGCAGCGGGGACCTATTCATGCATCTATGCCGACATTTAAGGGTGGCCAGACATCTAGGGGTTCTTATGGCCCAGGTCAGGGCTCGTACGGTTCAC</gDNA_template>
            <first_frame> A  *  G  L  R  V  *  D  R  M  V  S  V  T  E  Y  E  A  R  F  C  Q  L  S  R  H  A  L  A  I  I  P  N  E  T  E  R  I  R  R  F  V  R  G  L  T  F  S  I  R  S  A  V  F  R  T  C  R  E  G  T  S  F  Q  S  I  V  S  V  A  K  E  A  K  L  M  E  R  E  K  F  G  D  P  K  R  A  R  I  Y  Q  V  S  F  R  V  P  H  L  E  V  G  D  H  R  E  *  V  V  L  F  S  S  G  D  L  F  M  H  L  C  R  H  L  R  V  A  R  H  L  G  V  L  M  A  Q  V  R  A  R  T  V  H </first_frame>
            <second_frame>  L  E  V  *  E  S  E  T  G  W  F  R  L  Q  S  M  R  R  V  F  A  S  C  L  G  M  H  W  P  L  F  Q  M  R  Q  R  G  S  A  D  L  *  G  D  *  L  S  L  S  G  Q  L  C  F  G  H  V  G  R  G  L  L  S  S  L  L  *  A  S  P  K  R  R  N  *  W  R  E  R  S  L  G  T  L  K  E  L  V  Y  I  R  S  V  S  G  C  L  I  *  R  *  G  I  T  E  S  E  W  F  F  S  A  A  G  T  Y  S  C  I  Y  A  D  I  *  G  W  P  D  I  *  G  F  L  W  P  R  S  G  L  V  R  F   </second_frame>
            <third_frame>   L  R  F  E  S  L  R  Q  D  G  F  G  Y  R  V  *  G  A  F  L  P  V  V  *  A  C  I  G  H  Y  S  K  *  D  R  E  D  P  Q  I  C  E  G  I  D  F  L  Y  Q  V  S  C  V  S  D  M  *  G  G  D  F  F  P  V  Y  C  E  R  R  Q  R  G  E  I  D  G  E  R  E  V  W  G  P  *  K  S  S  Y  I  S  G  Q  F  Q  G  A  S  S  R  G  R  G  S  Q  R  V  S  G  S  F  Q  Q  R  G  P  I  H  A  S  M  P  T  F  K  G  G  Q  T  S  R  G  S  Y  G  P  G  Q  G  S  Y  G  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0049C13.2" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="84380" stop="84081"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>297</number_coding_nucleotides>
                  <number_encoded_amino_acids>99</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DRMVSVTEYEARFCQLSRHALAIIPNETERIRRFVRGLTFSIRSAVFRTCREGTSFQSIVSVAKEAKLMEREKFGDPKRARIYQVSFRVPHLEVGDHRE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="84820" PGL_stop="85122"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="84820" e_stop="85122"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.904"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.904">
            <gDNA_exon_boundary e_start="84820" e_stop="85122" e_length="303"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84820" stop="85122"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U344270" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTAGGTCTGAGCCCCCTCTCTAGTACGGGAGTCATATGGTGTGGTAATTTCACCACCACCCTGAGAAAAGCCCTCTAGCACACTTAACACCCTCAATAGTGTATCCTGAAGCAAAGGTGTGACTATGGGATCTGGAGGAACCTGGTCCTCTCTGTCATCAATCTGAGGTTTGGTAGAGACCTCTCTAGCAAGACCTCTCACTGGTGCTGCTCCACGTCCACGACCTCTGGCTACTGTCGTACTACTAGCACGACCTCTTGCTCGAGATCTACCCCTACCCCTAGTTGGGGCCTCAACAACTGC</gDNA_template>
            <first_frame> L  G  L  S  P  L  S  S  T  G  V  I  W  C  G  N  F  T  T  T  L  R  K  A  L  *  H  T  *  H  P  Q  *  C  I  L  K  Q  R  C  D  Y  G  I  W  R  N  L  V  L  S  V  I  N  L  R  F  G  R  D  L  S  S  K  T  S  H  W  C  C  S  T  S  T  T  S  G  Y  C  R  T  T  S  T  T  S  C  S  R  S  T  P  T  P  S  W  G  L  N  N  C </first_frame>
            <second_frame>  *  V  *  A  P  S  L  V  R  E  S  Y  G  V  V  I  S  P  P  P  *  E  K  P  S  S  T  L  N  T  L  N  S  V  S  *  S  K  G  V  T  M  G  S  G  G  T  W  S  S  L  S  S  I  *  G  L  V  E  T  S  L  A  R  P  L  T  G  A  A  P  R  P  R  P  L  A  T  V  V  L  L  A  R  P  L  A  R  D  L  P  L  P  L  V  G  A  S  T  T   </second_frame>
            <third_frame>   R  S  E  P  P  L  *  Y  G  S  H  M  V  W  *  F  H  H  H  P  E  K  S  P  L  A  H  L  T  P  S  I  V  Y  P  E  A  K  V  *  L  W  D  L  E  E  P  G  P  L  C  H  Q  S  E  V  W  *  R  P  L  *  Q  D  L  S  L  V  L  L  H  V  H  D  L  W  L  L  S  Y  Y  *  H  D  L  L  L  E  I  Y  P  Y  P  *  L  G  P  Q  Q  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0049C13.2" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="84919" stop="85122"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CILKQRCDYGIWRNLVLSVINLRFGRDLSSKTSHWCCSTSTTSGYCRTTSTTSCSRSTPTPSWGLNNC</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="97721" PGL_stop="99509"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="97721" e_stop="99509"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.969"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.969">
            <gDNA_exon_boundary e_start="97721" e_stop="99509" e_length="1789"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97721" stop="99509"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U319422" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCTGCTCTCTCAAATACAGAGCAATGGAGACCAAAGCAGAGCTTGTTTTCATTCCATCGCCGGGATTGGGTCACGTCGCTTCCGCTGTCGAATTCGCCAAACTCCTCCTTGCTACAAATGAACGACTATGCATTTCTCTTCTCGTCATGAAACATCCTGCTGATTTTGGTGTTCAATCTTATCTCCAATCACTCCCTTCTCTGTCCCGTTTTCGCTTCGTTGATGTTTCAATTGACCCGAAATTAGTTGTTCCACTTTTGTCTAACAAGGACAGATTCTTATACGATTTCATTGATGGTCACAAACACAAGGTAAGTGAATTTGTTACTAGTAATAATTCCACCCCTTCCCAATTTGGCTCTACTCAGCTTGCTGGCTTTGTTCTTGACATGTTCTGCATCTCCATGATTGATGTAGCTAATGAATTTTGTGTTCCTAGTTATATTTTCTTTACTTCTGCTGCTGCTTTTCTAGCCCTGTCCTTTCATTTTGAAGCTTTGAGGAATAACTTCAAGTTCGATTATTCCGAGTCTGATGAGGAATTATCGATTCTCGGATTTAAAAATCCGTATCCTGCTAAAGTTTTACCTAGACCAGCTAAAGCAATTACACCAAGCTCGACTTTGTACTACGATGGGATTCGTCGTTTTAGAGAGACCAAAGGTATTGTTATCAATACGTTTGCGGAGCTTGAACCTTTTGCTCTTCAGTCATTGTCTGATGCTAAAATGGCTCCTCCGATTTATCCCATTCATGCTGTATTCAATTCGGATGATAATGAGGAAAAACAGGAAATAGAAAGTATTGTGGAGTGGTTAGATAATCAGCCAAACTCATCTGTAGTGTTCTTGTGCTTTGGAACCATGGGTAGTTTTGAACCTGAGCAGGTAAAGGAGATAGCAATTGCGTTAGAGCATAGTGGGCACCGGTTCTTGTGGTCTTTACGAAGGCCTCCACCAAAGGGGAAAATAGAAATGCCAAGCAATTATGACAATTCGGAGGAAGTGCTGCCTGAAGGGTTCTTGGAGAGGACAAAAGGAATTGGGAAACTGGTAGGATGGGCACCACAAGTGACTGTACTTTCACATCCTGCGGTGGGGGTATTCGTGTCACATTGTGGATGGAATTCGACAATGGAGAGTGTGTGTTGTGGGGTGCCTATTGCTGCTTGGCCGTTGTATGCTGAACAACAGATGAATGCGTTTTTGTTGGTTAAGGAATTGGGTTTGGCAGTGGAGATTCGGATGGACTATGTGAAGGACTTTGAGGGGAAAAATCCAGTTGATATAGTTACTGCTGAGGAAATTGAAGGCGCCATACAGAAGCTTATGGAGAATGGTGAAGAGAATGAAGTGAGGAAAAGAGTGAAGGAAATGCGAGAGAAGAGCAGAAAAGCCATGGAAGAAGGCGGATCGTCTTATACCTCTTTACGACTTCTAATTGACGATTTCATCAGCAACATCTCCTGAAAAATTTCCGCAAAAAGATCTTCAGCAATGGTAGGTTTTTCACTGGATGCTCAGAACATAAACTTTTAAATGCATTATGACCAAAGTTTTCTATGTTGATATTTGTTGTTGTTGCATATTTTTAGTGTAATTATAGTTAGTATTGGCAGTTCATGCGCAGTCAAAAGATATTTTCCTTGATCATAATTTTTCAACTATTTTGTAAATATTTGGATTTTTAAGTATTGTGGCTTACTGTAGTTTCTAAATGTATAAATTTTATTTCAATGATATCAAATTCTATGTCTGAATCACATCAAACATTAATAAGTTTGACCCTC</gDNA_template>
            <first_frame> S  A  L  S  N  T  E  Q  W  R  P  K  Q  S  L  F  S  F  H  R  R  D  W  V  T  S  L  P  L  S  N  S  P  N  S  S  L  L  Q  M  N  D  Y  A  F  L  F  S  S  *  N  I  L  L  I  L  V  F  N  L  I  S  N  H  S  L  L  C  P  V  F  A  S  L  M  F  Q  L  T  R  N  *  L  F  H  F  C  L  T  R  T  D  S  Y  T  I  S  L  M  V  T  N  T  R  *  V  N  L  L  L  V  I  I  P  P  L  P  N  L  A  L  L  S  L  L  A  L  F  L  T  C  S  A  S  P  *  L  M  *  L  M  N  F  V  F  L  V  I  F  S  L  L  L  L  L  L  F  *  P  C  P  F  I  L  K  L  *  G  I  T  S  S  S  I  I  P  S  L  M  R  N  Y  R  F  S  D  L  K  I  R  I  L  L  K  F  Y  L  D  Q  L  K  Q  L  H  Q  A  R  L  C  T  T  M  G  F  V  V  L  E  R  P  K  V  L  L  S  I  R  L  R  S  L  N  L  L  L  F  S  H  C  L  M  L  K  W  L  L  R  F  I  P  F  M  L  Y  S  I  R  M  I  M  R  K  N  R  K  *  K  V  L  W  S  G  *  I  I  S  Q  T  H  L  *  C  S  C  A  L  E  P  W  V  V  L  N  L  S  R  *  R  R  *  Q  L  R  *  S  I  V  G  T  G  S  C  G  L  Y  E  G  L  H  Q  R  G  K  *  K  C  Q  A  I  M  T  I  R  R  K  C  C  L  K  G  S  W  R  G  Q  K  E  L  G  N  W  *  D  G  H  H  K  *  L  Y  F  H  I  L  R  W  G  Y  S  C  H  I  V  D  G  I  R  Q  W  R  V  C  V  V  G  C  L  L  L  L  G  R  C  M  L  N  N  R  *  M  R  F  C  W  L  R  N  W  V  W  Q  W  R  F  G  W  T  M  *  R  T  L  R  G  K  I  Q  L  I  *  L  L  L  R  K  L  K  A  P  Y  R  S  L  W  R  M  V  K  R  M  K  *  G  K  E  *  R  K  C  E  R  R  A  E  K  P  W  K  K  A  D  R  L  I  P  L  Y  D  F  *  L  T  I  S  S  A  T  S  P  E  K  F  P  Q  K  D  L  Q  Q  W  *  V  F  H  W  M  L  R  T  *  T  F  K  C  I  M  T  K  V  F  Y  V  D  I  C  C  C  C  I  F  L  V  *  L  *  L  V  L  A  V  H  A  Q  S  K  D  I  F  L  D  H  N  F  S  T  I  L  *  I  F  G  F  L  S  I  V  A  Y  C  S  F  *  M  Y  K  F  Y  F  N  D  I  K  F  Y  V  *  I  T  S  N  I  N  K  F  D  P  </first_frame>
            <second_frame>  L  L  S  Q  I  Q  S  N  G  D  Q  S  R  A  C  F  H  S  I  A  G  I  G  S  R  R  F  R  C  R  I  R  Q  T  P  P  C  Y  K  *  T  T  M  H  F  S  S  R  H  E  T  S  C  *  F  W  C  S  I  L  S  P  I  T  P  F  S  V  P  F  S  L  R  *  C  F  N  *  P  E  I  S  C  S  T  F  V  *  Q  G  Q  I  L  I  R  F  H  *  W  S  Q  T  Q  G  K  *  I  C  Y  *  *  *  F  H  P  F  P  I  W  L  Y  S  A  C  W  L  C  S  *  H  V  L  H  L  H  D  *  C  S  *  *  I  L  C  S  *  L  Y  F  L  Y  F  C  C  C  F  S  S  P  V  L  S  F  *  S  F  E  E  *  L  Q  V  R  L  F  R  V  *  *  G  I  I  D  S  R  I  *  K  S  V  S  C  *  S  F  T  *  T  S  *  S  N  Y  T  K  L  D  F  V  L  R  W  D  S  S  F  *  R  D  Q  R  Y  C  Y  Q  Y  V  C  G  A  *  T  F  C  S  S  V  I  V  *  C  *  N  G  S  S  D  L  S  H  S  C  C  I  Q  F  G  *  *  *  G  K  T  G  N  R  K  Y  C  G  V  V  R  *  S  A  K  L  I  C  S  V  L  V  L  W  N  H  G  *  F  *  T  *  A  G  K  G  D  S  N  C  V  R  A  *  W  A  P  V  L  V  V  F  T  K  A  S  T  K  G  E  N  R  N  A  K  Q  L  *  Q  F  G  G  S  A  A  *  R  V  L  G  E  D  K  R  N  W  E  T  G  R  M  G  T  T  S  D  C  T  F  T  S  C  G  G  G  I  R  V  T  L  W  M  E  F  D  N  G  E  C  V  L  W  G  A  Y  C  C  L  A  V  V  C  *  T  T  D  E  C  V  F  V  G  *  G  I  G  F  G  S  G  D  S  D  G  L  C  E  G  L  *  G  E  K  S  S  *  Y  S  Y  C  *  G  N  *  R  R  H  T  E  A  Y  G  E  W  *  R  E  *  S  E  E  K  S  E  G  N  A  R  E  E  Q  K  S  H  G  R  R  R  I  V  L  Y  L  F  T  T  S  N  *  R  F  H  Q  Q  H  L  L  K  N  F  R  K  K  I  F  S  N  G  R  F  F  T  G  C  S  E  H  K  L  L  N  A  L  *  P  K  F  S  M  L  I  F  V  V  V  A  Y  F  *  C  N  Y  S  *  Y  W  Q  F  M  R  S  Q  K  I  F  S  L  I  I  I  F  Q  L  F  C  K  Y  L  D  F  *  V  L  W  L  T  V  V  S  K  C  I  N  F  I  S  M  I  S  N  S  M  S  E  S  H  Q  T  L  I  S  L  T  L </second_frame>
            <third_frame>   C  S  L  K  Y  R  A  M  E  T  K  A  E  L  V  F  I  P  S  P  G  L  G  H  V  A  S  A  V  E  F  A  K  L  L  L  A  T  N  E  R  L  C  I  S  L  L  V  M  K  H  P  A  D  F  G  V  Q  S  Y  L  Q  S  L  P  S  L  S  R  F  R  F  V  D  V  S  I  D  P  K  L  V  V  P  L  L  S  N  K  D  R  F  L  Y  D  F  I  D  G  H  K  H  K  V  S  E  F  V  T  S  N  N  S  T  P  S  Q  F  G  S  T  Q  L  A  G  F  V  L  D  M  F  C  I  S  M  I  D  V  A  N  E  F  C  V  P  S  Y  I  F  F  T  S  A  A  A  F  L  A  L  S  F  H  F  E  A  L  R  N  N  F  K  F  D  Y  S  E  S  D  E  E  L  S  I  L  G  F  K  N  P  Y  P  A  K  V  L  P  R  P  A  K  A  I  T  P  S  S  T  L  Y  Y  D  G  I  R  R  F  R  E  T  K  G  I  V  I  N  T  F  A  E  L  E  P  F  A  L  Q  S  L  S  D  A  K  M  A  P  P  I  Y  P  I  H  A  V  F  N  S  D  D  N  E  E  K  Q  E  I  E  S  I  V  E  W  L  D  N  Q  P  N  S  S  V  V  F  L  C  F  G  T  M  G  S  F  E  P  E  Q  V  K  E  I  A  I  A  L  E  H  S  G  H  R  F  L  W  S  L  R  R  P  P  P  K  G  K  I  E  M  P  S  N  Y  D  N  S  E  E  V  L  P  E  G  F  L  E  R  T  K  G  I  G  K  L  V  G  W  A  P  Q  V  T  V  L  S  H  P  A  V  G  V  F  V  S  H  C  G  W  N  S  T  M  E  S  V  C  C  G  V  P  I  A  A  W  P  L  Y  A  E  Q  Q  M  N  A  F  L  L  V  K  E  L  G  L  A  V  E  I  R  M  D  Y  V  K  D  F  E  G  K  N  P  V  D  I  V  T  A  E  E  I  E  G  A  I  Q  K  L  M  E  N  G  E  E  N  E  V  R  K  R  V  K  E  M  R  E  K  S  R  K  A  M  E  E  G  G  S  S  Y  T  S  L  R  L  L  I  D  D  F  I  S  N  I  S  *  K  I  S  A  K  R  S  S  A  M  V  G  F  S  L  D  A  Q  N  I  N  F  *  M  H  Y  D  Q  S  F  L  C  *  Y  L  L  L  L  H  I  F  S  V  I  I  V  S  I  G  S  S  C  A  V  K  R  Y  F  P  *  S  *  F  F  N  Y  F  V  N  I  W  I  F  K  Y  C  G  L  L  *  F  L  N  V  *  I  L  F  Q  *  Y  Q  I  L  C  L  N  H  I  K  H  *  *  V  *  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0049C13.2" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="97723" stop="99189"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1464</number_coding_nucleotides>
                  <number_encoded_amino_acids>488</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CSLKYRAMETKAELVFIPSPGLGHVASAVEFAKLLLATNERLCISLLVMKHPADFGVQSYLQSLPSLSRFRFVDVSIDPKLVVPLLSNKDRFLYDFIDGHKHKVSEFVTSNNSTPSQFGSTQLAGFVLDMFCISMIDVANEFCVPSYIFFTSAAAFLALSFHFEALRNNFKFDYSESDEELSILGFKNPYPAKVLPRPAKAITPSSTLYYDGIRRFRETKGIVINTFAELEPFALQSLSDAKMAPPIYPIHAVFNSDDNEEKQEIESIVEWLDNQPNSSVVFLCFGTMGSFEPEQVKEIAIALEHSGHRFLWSLRRPPPKGKIEMPSNYDNSEEVLPEGFLERTKGIGKLVGWAPQVTVLSHPAVGVFVSHCGWNSTMESVCCGVPIAAWPLYAEQQMNAFLLVKELGLAVEIRMDYVKDFEGKNPVDIVTAEEIEGAIQKLMENGEENEVRKRVKEMREKSRKAMEEGGSSYTSLRLLIDDFISNIS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="101064" PGL_stop="99425"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="101064" e_stop="99425"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="101064" e_stop="99425" e_length="1640"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101064" stop="100065"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U326063" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100126" stop="99425"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U329955" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CACACTTGAGATGGCAAAGGTCCTAATAGCTAGAGATGAACATCTCGTCATTACAGTCCTCGTAATCAAGCTGCCTTGTGACAACAAACTCAGCTCTTATATTGAATCAGTCTCGACAAACCCAAACTACAACTCTCAAATGAAGTTCATTGAACTCCCTCAAGATGAGTCCATCTTACAGTCAATCACAAACACAACTTTCATCACATTTTTATCCAGTCATAAGCCTCAAGTCAGAAATTCAGTGATTGAAATCTTGAATTCAGGATCAAATCGTCTTGCGGCCCTCGTTATTGACATGATGTGTACAGCAATGATAGACGTTGCCAATGAATTTGGACTCCCGACTTATGTTTTCTACACATCTGGTGCTGCCATGCTTGGTCTTCAGCTTCATTTGCAGAGTCTCAGGGATGATTTTAACGAAGATGTGACAGATTACGAGGATGATCCAGAAGCAGAGCTTTCGGTGACAACGTATGGAAACCCATTTCCAGCTAAATGTTTGCCATCTATAGCCTTTGACAAGGATGGTGGTTCCACAATGTACCTTGATCTTTCTAAAAGGCTTCGAGAAGCTAAAGCTATTCTTGTTAACACTTTCTCCGAATTCGAATCTCATGCTGTCAAATCCCTCTCCCTCGATGAGAAAATCCCACTTGTATACCCAGTCGGACCCTTGCTAAACCTTGATAACGATCAGGTTAACAATCAAGATTCTTCTCAGCATCAAACTATAATCAACTGGTTAGATGATCAACCTGATTCATCAGTAGTGTACCTCTGCTTCGGAAGCTTAGGAAGCTTCAACGAGGAGCAAATAAAGGAAATTGCATATGCTCTGGAGAAGAGCGGATGTCGATTCTTGTGGTCCTTAAAGAAGCCTTTGGCTAAAGATACATTTTTTCCAGCTGCTTATGATAATCCAGAGGATGTTTTGCCTGAGGGGTTCTTGCAAAGGACGGAAGCAATTGGGAAGGTGATAGGATGGGCACCCCAGGTGGCTATCTTGAGTCATGATGCTGTAGGAGGCTTTGTGTCACACTGTGGGTGGAATTCGACTTTAGAGAGCATGTGGTTCGGAGTACCACTGGCAACTTGGCCAATCTATTCGGAGCAGCAAGCGAATGCATTTCAATTGGTGAAGGATTTAGAGATAGCAGTGGAGATTAAGATGGATTATAGGAAGGATCTCAGAGGGACCGAATCGAATGTTATAGTAAAAGCAGAGGAGATAGAGAAAGCAATAAAGCAGCTGATGGAGCCTGAAAATGAAATAAGGTTGAAAGTGAAAGGCATGAAGGAAAAGAGCAGATTGGTGCTCAAAGAAGGTGGATCTTCCTACAATGCTGTTGGACATTTTATCGAACAAGTGATGGACATCACAAATTGAGAAACAATCTTTAAAACAGCGATATAATTATTCGAAAACAATAAAATTTCTTCTACAGTTCGATTTGGTCTTCTTCTAGACCACTGCATTCTTATTTTAGTTATTATGTAGTTCTCATGTAAAAATTTTCAGTCCAAGAGTACTGTATTAAAGTGGGAGTACGAGGGTCAAACTTATTAATGTTTGATGTGATTCAGACATAGAATTTGATATCATTGAAATAAAATTTATACATTTAGAAACTACA</gDNA_template>
            <first_frame> H  T  *  D  G  K  G  P  N  S  *  R  *  T  S  R  H  Y  S  P  R  N  Q  A  A  L  *  Q  Q  T  Q  L  L  Y  *  I  S  L  D  K  P  K  L  Q  L  S  N  E  V  H  *  T  P  S  R  *  V  H  L  T  V  N  H  K  H  N  F  H  H  I  F  I  Q  S  *  A  S  S  Q  K  F  S  D  *  N  L  E  F  R  I  K  S  S  C  G  P  R  Y  *  H  D  V  Y  S  N  D  R  R  C  Q  *  I  W  T  P  D  L  C  F  L  H  I  W  C  C  H  A  W  S  S  A  S  F  A  E  S  Q  G  *  F  *  R  R  C  D  R  L  R  G  *  S  R  S  R  A  F  G  D  N  V  W  K  P  I  S  S  *  M  F  A  I  Y  S  L  *  Q  G  W  W  F  H  N  V  P  *  S  F  *  K  A  S  R  S  *  S  Y  S  C  *  H  F  L  R  I  R  I  S  C  C  Q  I  P  L  P  R  *  E  N  P  T  C  I  P  S  R  T  L  A  K  P  *  *  R  S  G  *  Q  S  R  F  F  S  A  S  N  Y  N  Q  L  V  R  *  S  T  *  F  I  S  S  V  P  L  L  R  K  L  R  K  L  Q  R  G  A  N  K  G  N  C  I  C  S  G  E  E  R  M  S  I  L  V  V  L  K  E  A  F  G  *  R  Y  I  F  S  S  C  L  *  *  S  R  G  C  F  A  *  G  V  L  A  K  D  G  S  N  W  E  G  D  R  M  G  T  P  G  G  Y  L  E  S  *  C  C  R  R  L  C  V  T  L  W  V  E  F  D  F  R  E  H  V  V  R  S  T  T  G  N  L  A  N  L  F  G  A  A  S  E  C  I  S  I  G  E  G  F  R  D  S  S  G  D  *  D  G  L  *  E  G  S  Q  R  D  R  I  E  C  Y  S  K  S  R  G  D  R  E  S  N  K  A  A  D  G  A  *  K  *  N  K  V  E  S  E  R  H  E  G  K  E  Q  I  G  A  Q  R  R  W  I  F  L  Q  C  C  W  T  F  Y  R  T  S  D  G  H  H  K  L  R  N  N  L  *  N  S  D  I  I  I  R  K  Q  *  N  F  F  Y  S  S  I  W  S  S  S  R  P  L  H  S  Y  F  S  Y  Y  V  V  L  M  *  K  F  S  V  Q  E  Y  C  I  K  V  G  V  R  G  S  N  L  L  M  F  D  V  I  Q  T  *  N  L  I  S  L  K  *  N  L  Y  I  *  K  L   </first_frame>
            <second_frame>  T  L  E  M  A  K  V  L  I  A  R  D  E  H  L  V  I  T  V  L  V  I  K  L  P  C  D  N  K  L  S  S  Y  I  E  S  V  S  T  N  P  N  Y  N  S  Q  M  K  F  I  E  L  P  Q  D  E  S  I  L  Q  S  I  T  N  T  T  F  I  T  F  L  S  S  H  K  P  Q  V  R  N  S  V  I  E  I  L  N  S  G  S  N  R  L  A  A  L  V  I  D  M  M  C  T  A  M  I  D  V  A  N  E  F  G  L  P  T  Y  V  F  Y  T  S  G  A  A  M  L  G  L  Q  L  H  L  Q  S  L  R  D  D  F  N  E  D  V  T  D  Y  E  D  D  P  E  A  E  L  S  V  T  T  Y  G  N  P  F  P  A  K  C  L  P  S  I  A  F  D  K  D  G  G  S  T  M  Y  L  D  L  S  K  R  L  R  E  A  K  A  I  L  V  N  T  F  S  E  F  E  S  H  A  V  K  S  L  S  L  D  E  K  I  P  L  V  Y  P  V  G  P  L  L  N  L  D  N  D  Q  V  N  N  Q  D  S  S  Q  H  Q  T  I  I  N  W  L  D  D  Q  P  D  S  S  V  V  Y  L  C  F  G  S  L  G  S  F  N  E  E  Q  I  K  E  I  A  Y  A  L  E  K  S  G  C  R  F  L  W  S  L  K  K  P  L  A  K  D  T  F  F  P  A  A  Y  D  N  P  E  D  V  L  P  E  G  F  L  Q  R  T  E  A  I  G  K  V  I  G  W  A  P  Q  V  A  I  L  S  H  D  A  V  G  G  F  V  S  H  C  G  W  N  S  T  L  E  S  M  W  F  G  V  P  L  A  T  W  P  I  Y  S  E  Q  Q  A  N  A  F  Q  L  V  K  D  L  E  I  A  V  E  I  K  M  D  Y  R  K  D  L  R  G  T  E  S  N  V  I  V  K  A  E  E  I  E  K  A  I  K  Q  L  M  E  P  E  N  E  I  R  L  K  V  K  G  M  K  E  K  S  R  L  V  L  K  E  G  G  S  S  Y  N  A  V  G  H  F  I  E  Q  V  M  D  I  T  N  *  E  T  I  F  K  T  A  I  *  L  F  E  N  N  K  I  S  S  T  V  R  F  G  L  L  L  D  H  C  I  L  I  L  V  I  M  *  F  S  C  K  N  F  Q  S  K  S  T  V  L  K  W  E  Y  E  G  Q  T  Y  *  C  L  M  *  F  R  H  R  I  *  Y  H  *  N  K  I  Y  T  F  R  N  Y  </second_frame>
            <third_frame>   H  L  R  W  Q  R  S  *  *  L  E  M  N  I  S  S  L  Q  S  S  *  S  S  C  L  V  T  T  N  S  A  L  I  L  N  Q  S  R  Q  T  Q  T  T  T  L  K  *  S  S  L  N  S  L  K  M  S  P  S  Y  S  Q  S  Q  T  Q  L  S  S  H  F  Y  P  V  I  S  L  K  S  E  I  Q  *  L  K  S  *  I  Q  D  Q  I  V  L  R  P  S  L  L  T  *  C  V  Q  Q  *  *  T  L  P  M  N  L  D  S  R  L  M  F  S  T  H  L  V  L  P  C  L  V  F  S  F  I  C  R  V  S  G  M  I  L  T  K  M  *  Q  I  T  R  M  I  Q  K  Q  S  F  R  *  Q  R  M  E  T  H  F  Q  L  N  V  C  H  L  *  P  L  T  R  M  V  V  P  Q  C  T  L  I  F  L  K  G  F  E  K  L  K  L  F  L  L  T  L  S  P  N  S  N  L  M  L  S  N  P  S  P  S  M  R  K  S  H  L  Y  T  Q  S  D  P  C  *  T  L  I  T  I  R  L  T  I  K  I  L  L  S  I  K  L  *  S  T  G  *  M  I  N  L  I  H  Q  *  C  T  S  A  S  E  A  *  E  A  S  T  R  S  K  *  R  K  L  H  M  L  W  R  R  A  D  V  D  S  C  G  P  *  R  S  L  W  L  K  I  H  F  F  Q  L  L  M  I  I  Q  R  M  F  C  L  R  G  S  C  K  G  R  K  Q  L  G  R  *  *  D  G  H  P  R  W  L  S  *  V  M  M  L  *  E  A  L  C  H  T  V  G  G  I  R  L  *  R  A  C  G  S  E  Y  H  W  Q  L  G  Q  S  I  R  S  S  K  R  M  H  F  N  W  *  R  I  *  R  *  Q  W  R  L  R  W  I  I  G  R  I  S  E  G  P  N  R  M  L  *  *  K  Q  R  R  *  R  K  Q  *  S  S  *  W  S  L  K  M  K  *  G  *  K  *  K  A  *  R  K  R  A  D  W  C  S  K  K  V  D  L  P  T  M  L  L  D  I  L  S  N  K  *  W  T  S  Q  I  E  K  Q  S  L  K  Q  R  Y  N  Y  S  K  T  I  K  F  L  L  Q  F  D  L  V  F  F  *  T  T  A  F  L  F  *  L  L  C  S  S  H  V  K  I  F  S  P  R  V  L  Y  *  S  G  S  T  R  V  K  L  I  N  V  *  C  D  S  D  I  E  F  D  I  I  E  I  K  F  I  H  L  E  T  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0049C13.2" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="101063" stop="99672"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1389</number_coding_nucleotides>
                  <number_encoded_amino_acids>463</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TLEMAKVLIARDEHLVITVLVIKLPCDNKLSSYIESVSTNPNYNSQMKFIELPQDESILQSITNTTFITFLSSHKPQVRNSVIEILNSGSNRLAALVIDMMCTAMIDVANEFGLPTYVFYTSGAAMLGLQLHLQSLRDDFNEDVTDYEDDPEAELSVTTYGNPFPAKCLPSIAFDKDGGSTMYLDLSKRLREAKAILVNTFSEFESHAVKSLSLDEKIPLVYPVGPLLNLDNDQVNNQDSSQHQTIINWLDDQPDSSVVYLCFGSLGSFNEEQIKEIAYALEKSGCRFLWSLKKPLAKDTFFPAAYDNPEDVLPEGFLQRTEAIGKVIGWAPQVAILSHDAVGGFVSHCGWNSTLESMWFGVPLATWPIYSEQQANAFQLVKDLEIAVEIKMDYRKDLRGTESNVIVKAEEIEKAIKQLMEPENEIRLKVKGMKEKSRLVLKEGGSSYNAVGHFIEQVMDITN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 52 chains have been computed
$ 
$ memory statistics:
$ 22152 bytes spliced alignments in total
$ 11 spliced alignments have been stored
$ 2013 bytes was the average size of a spliced alignment
$ 15216 bytes predicted gene locations in total
$ 9 predicted gene locations have been stored
$ 1690 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 70 backtrace matrices have been allocated
$ 
$ date finished: 2008-03-23 05:57:50
-->
