<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2008-03-26 22:19:23"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E212208" ref_strand="+" ref_description="SGN-E212208 [cLEC-75-K19]">
      <seq>ttttccctaaacaagttactttctctttttccactctaaactatagtaatacatacacacttcccaactcccaagaaaagaaaaaaaaaagaaaattcaagaatcaatagctcttgttaatattgcataaattcaagaatcttgagttattttctcttcatcattttgttcaagactcttttttgtgttttagatcccaacaacaaaaaagaaaaccccctttttttgcttctctatgtctgataataacccttttaatcatgattatgcatttcctttctttggtgaaaatccctcaatttatggtaatcaagccaataacacacaaaaccctcatcataatcatcatgattttgactattcttcatcttatatgagtaatctcacagagtgtttacatggagggtcaatggatcattacaacactttgtcaagtgcttttgggatgaataattgttcatcatcctctgaagttgtttgtccacaaccatcaatagatcatcatcaagaatgttctagaaagaatattaatagtgttgataatcaaattccattaacacctaattcattaatctcttcatcttctaatagtgaggttggtggatgtcatgaagaagattcttcaaaaatcaagaaagatgatgatcagtgtgaattagatggagatgatgatgatgatgataataagtctaagaaagtggggaaatttggcaagaagaaagggagaaagaacnaaaggaaccaagaattgcatttatgacca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="-" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="1883" stop="584"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1583" g_stop="885" g_length="699"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="699" r_length="699" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="-" ref_id="SGN-E212208" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>699</cumulative_length_of_scored_exons>
        <coverage percentage="0.916" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E212208" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1583" e_stop="885"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCCCTAAACAAGTTACTTTCTCTTTTTCCACTCTAAACTATAGTAATACATACACACTTCCCAACTCCCAAGAAAAGAAAAAAAAAAGAAAATTCAAGAATCAATAGCTCTTGTTAATATTGCATAAATTCAAGAATCTTGAGTTATTTTCTCTTCATCATTTTGTTCAAGACTCTTTTTTGTGTTTTAGATCCCAACAACAAAAAAGAAAACCCCCTTTTTTTGCTTCTCTATGTCTGATAATAACCCTTTTAATCATGATTATGCATTTCCTTTCTTTGGTGAAAATCCCTCAATTTATGGTAATCAAGCCAATAACACACAAAACCCTCATCATAATCATCATGATTTTGACTATTCTTCATCTTATATGAGTAATCTCACAGAGTGTTTACATGGAGGGTCAATGGATCATTACAACACTTTGTCAAGTGCTTTTGGGATGAATAATTGTTCATCATCCTCTGAAGTTGTTTGTCCACAACCATCAATAGATCATCATCAAGAATGTTCTAGAAAGAATATTAATAGTGTTGATAATCAAATTCCATTAACACCTAATTCATTAATCTCTTCATCTTCTAATAGTGAGGTTGGTGGATGTCATGAAGAAGATTCTTCAAAAATCAAGAAAGATGATGATCAGTGTGAATTAGATGGAGATGATGATGATGATGATAATAAGTCTAAGAAAGT</genome_strand>
        <mrna_strand>TTTTCCCTAAACAAGTTACTTTCTCTTTTTCCACTCTAAACTATAGTAATACATACACACTTCCCAACTCCCAAGAAAAGAAAAAAAAAAGAAAATTCAAGAATCAATAGCTCTTGTTAATATTGCATAAATTCAAGAATCTTGAGTTATTTTCTCTTCATCATTTTGTTCAAGACTCTTTTTTGTGTTTTAGATCCCAACAACAAAAAAGAAAACCCCCTTTTTTTGCTTCTCTATGTCTGATAATAACCCTTTTAATCATGATTATGCATTTCCTTTCTTTGGTGAAAATCCCTCAATTTATGGTAATCAAGCCAATAACACACAAAACCCTCATCATAATCATCATGATTTTGACTATTCTTCATCTTATATGAGTAATCTCACAGAGTGTTTACATGGAGGGTCAATGGATCATTACAACACTTTGTCAAGTGCTTTTGGGATGAATAATTGTTCATCATCCTCTGAAGTTGTTTGTCCACAACCATCAATAGATCATCATCAAGAATGTTCTAGAAAGAATATTAATAGTGTTGATAATCAAATTCCATTAACACCTAATTCATTAATCTCTTCATCTTCTAATAGTGAGGTTGGTGGATGTCATGAAGAAGATTCTTCAAAAATCAAGAAAGATGATGATCAGTGTGAATTAGATGGAGATGATGATGATGATGATAATAAGTCTAAGAAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E418343" ref_strand="+" ref_description="SGN-E418343 [STM-27-G2]">
      <seq>gaaccattcatttctatttcccttaaactatagtaatacatacacacttcccaactcccaagaaaaggaaaaaagaagaagaagaagaaaattcaagaatcaatagctcttgttaatattgcataaattcaagaatcttgagttattttctcttcatcattttcttcaagactctttttgtgtttagatcccaaccaaaaaaaaaatcaaaccatttttttacttctctatgtctgataataacccttttaatcatgattatgcatttcctttctttggtgaaaatccctcaatttatgctaatcaagccaataacacacaaaaccctcatcataatcatcaagattttgattatccttcatcttatatgagtaatctcacagagtgtttacatggagggtcaatggatcattacaacactttatcaagtgcttttgggatgaataattgttcatcatcctctgaagttgtttgtccacaaccatcactagatcatcaagaatgttctagaaagaatattaagagtgttgataatcaaattccattaacacctaattcattaatatcttcatcttctaatagtgaggctggtggatgtcatgaagaagattcttcaaaaatcagaaagatgatgatcagtgtgaattagatggagatgatgatgctaataagtctaagaaagtggggaaattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="-" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="1874" stop="603"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1508" g_stop="885" g_length="624"/>
          <reference_exon_boundary r_type="cDNA" r_start="71" r_stop="683" r_length="613" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="-" ref_id="SGN-E418343" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>624</cumulative_length_of_scored_exons>
        <coverage percentage="0.900" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E418343" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1508" e_stop="885"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGAA-AAAAAAAAGAAAATTCAAGAATCAATAGCTCTTGTTAATATTGCATAAATTCAAGAATCTTGAGTTATTTTCTCTTCATCATTTTGTTCAAGACTCTTTTTTGTGTTTTAGATCCCAACAACAAAAAAGAAAACCCCCTTTTTTTGCTTCTCTATGTCTGATAATAACCCTTTTAATCATGATTATGCATTTCCTTTCTTTGGTGAAAATCCCTCAATTTATGGTAATCAAGCCAATAACACACAAAACCCTCATCATAATCATCATGATTTTGACTATTCTTCATCTTATATGAGTAATCTCACAGAGTGTTTACATGGAGGGTCAATGGATCATTACAACACTTTGTCAAGTGCTTTTGGGATGAATAATTGTTCATCATCCTCTGAAGTTGTTTGTCCACAACCATCAATAGATCATCATCAAGAATGTTCTAGAAAGAATATTAATAGTGTTGATAATCAAATTCCATTAACACCTAATTCATTAATCTCTTCATCTTCTAATAGTGAGGTTGGTGGATGTCATGAAGAAGATTCTTCAAAAATCAAGAAAGATGATGATCAGTGTGAATTAGATGGAGATGATGATGATGATGATAATAAGTCTAAGAAAGT</genome_strand>
        <mrna_strand>AAAAGAAGAAGAAGAAGAAAATTCAAGAATCAATAGCTCTTGTTAATATTGCATAAATTCAAGAATCTTGAGTTATTTTCTCTTCATCATTTTCTTCAAGACTC-TTTTTGTG-TTTAGATCCCAACCAAAAAAAAAATCAAACCATTTTTTTACTTCTCTATGTCTGATAATAACCCTTTTAATCATGATTATGCATTTCCTTTCTTTGGTGAAAATCCCTCAATTTATGCTAATCAAGCCAATAACACACAAAACCCTCATCATAATCATCAAGATTTTGATTATCCTTCATCTTATATGAGTAATCTCACAGAGTGTTTACATGGAGGGTCAATGGATCATTACAACACTTTATCAAGTGCTTTTGGGATGAATAATTGTTCATCATCCTCTGAAGTTGTTTGTCCACAACCATCACTAG---ATCATCAAGAATGTTCTAGAAAGAATATTAAGAGTGTTGATAATCAAATTCCATTAACACCTAATTCATTAATATCTTCATCTTCTAATAGTGAGGCTGGTGGATGTCATGAAGAAGATTCTTCAAAAATC-AGAAAGATGATGATCAGTGTGAATTAGAT---G--GA-GATGATGATGCTAATAAGTCTAAGAAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E377218" ref_strand="+" ref_description="SGN-E377218 [TUS-19-J18]">
      <seq>tcatttctattttccctaaacaagttactttctctttttccactctaaactatagtaatacatacacacttcccaactcccaagaaaagaaaaaaaaaagaaaattcaagaatcaatagctcttgttaatattgcataaattcaagaatcttgagttattttctcttcatcattttgttcaagactcttttttgtgttttagatcccaacaacaaaaaagaaaaccccctttttttgcttctctatgtctgataataacccttttaatcatgattatgcatttcctttctttggtgaaaatccctcaatttatggtaatcaagccaataacacacaaaaccctcatcataatcatcatgattttgactattcttcatcttatatgagtaatctcacagagtgtttacatggagggtcaatggatcattacaacactttgtcaagtgcttttgggatgaataattgttcatcatcctctgaagttgtttgtccacaaccatcaatagatcatcatcaagaatgttctagaaagaatattaatagtgttgataatcaaattccattaacacctaattcattaatctcttcatcttctaatagtgaggttggtggatgtcatgaagaagattcttcaaaaatcaagaaagatgatgatcagtgtgaattagatggagatgatgatgatgatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="-" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="1892" stop="603"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1592" g_stop="903" g_length="690"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="690" r_length="690" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="-" ref_id="SGN-E377218" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>690</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E377218" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1592" e_stop="903"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATTTCTATTTTCCCTAAACAAGTTACTTTCTCTTTTTCCACTCTAAACTATAGTAATACATACACACTTCCCAACTCCCAAGAAAAGAAAAAAAAAAGAAAATTCAAGAATCAATAGCTCTTGTTAATATTGCATAAATTCAAGAATCTTGAGTTATTTTCTCTTCATCATTTTGTTCAAGACTCTTTTTTGTGTTTTAGATCCCAACAACAAAAAAGAAAACCCCCTTTTTTTGCTTCTCTATGTCTGATAATAACCCTTTTAATCATGATTATGCATTTCCTTTCTTTGGTGAAAATCCCTCAATTTATGGTAATCAAGCCAATAACACACAAAACCCTCATCATAATCATCATGATTTTGACTATTCTTCATCTTATATGAGTAATCTCACAGAGTGTTTACATGGAGGGTCAATGGATCATTACAACACTTTGTCAAGTGCTTTTGGGATGAATAATTGTTCATCATCCTCTGAAGTTGTTTGTCCACAACCATCAATAGATCATCATCAAGAATGTTCTAGAAAGAATATTAATAGTGTTGATAATCAAATTCCATTAACACCTAATTCATTAATCTCTTCATCTTCTAATAGTGAGGTTGGTGGATGTCATGAAGAAGATTCTTCAAAAATCAAGAAAGATGATGATCAGTGTGAATTAGATGGAGATGATGATGATGATGA</genome_strand>
        <mrna_strand>TCATTTCTATTTTCCCTAAACAAGTTACTTTCTCTTTTTCCACTCTAAACTATAGTAATACATACACACTTCCCAACTCCCAAGAAAAGAAAAAAAAAAGAAAATTCAAGAATCAATAGCTCTTGTTAATATTGCATAAATTCAAGAATCTTGAGTTATTTTCTCTTCATCATTTTGTTCAAGACTCTTTTTTGTGTTTTAGATCCCAACAACAAAAAAGAAAACCCCCTTTTTTTGCTTCTCTATGTCTGATAATAACCCTTTTAATCATGATTATGCATTTCCTTTCTTTGGTGAAAATCCCTCAATTTATGGTAATCAAGCCAATAACACACAAAACCCTCATCATAATCATCATGATTTTGACTATTCTTCATCTTATATGAGTAATCTCACAGAGTGTTTACATGGAGGGTCAATGGATCATTACAACACTTTGTCAAGTGCTTTTGGGATGAATAATTGTTCATCATCCTCTGAAGTTGTTTGTCCACAACCATCAATAGATCATCATCAAGAATGTTCTAGAAAGAATATTAATAGTGTTGATAATCAAATTCCATTAACACCTAATTCATTAATCTCTTCATCTTCTAATAGTGAGGTTGGTGGATGTCATGAAGAAGATTCTTCAAAAATCAAGAAAGATGATGATCAGTGTGAATTAGATGGAGATGATGATGATGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E202470" ref_strand="+" ref_description="SGN-E202470 [cLEC-6-I8]">
      <seq>ttcatttctattttccctaaacaagttactttctctttttccactctaaactatagtaatacatacacacttcccaactcccaagaaaagaaaaaaaaaaagaaaattcaagaatcaatagctcttgttaatattgcataaattcaagaatcttgagttattttctcttcatcattttgttcaagactcttttttgtgttttagatcccaacaacaaaaaagaaaaccccctttttttgcttctctatgtctgataataacccttttaatcatgattatgcatttcctttctttggtgaaaatccctcaatttatggtaatcaagccaataacacacaaaaccctcatcataatcatcatgattttgactattcttcatcttatatgagtaatctcacagagtgtttacatggagggtcaatggatcattacaacactttgtcaagtgcttttgggatgaataattgttcatcatcctctgaagttgtttgtgcacaaccatcaatagatcatcatcaagaatgttctagaaagaatattaatagtgttgataatcaaattccattaacacctaattcattaatctcttcatcttctaatagtgaggttggtggatgtcatgaagaagattcttcaaaaatcaagaaagatggatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="-" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="1893" stop="638"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1593" g_stop="938" g_length="656"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="658" r_length="658" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="-" ref_id="SGN-E202470" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>656</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E202470" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1593" e_stop="938"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCATTTCTATTTTCCCTAAACAAGTTACTTTCTCTTTTTCCACTCTAAACTATAGTAATACATACACACTTCCCAACTCCCAAGAAAAG-AAAAAAAAAAGAAAATTCAAGAATCAATAGCTCTTGTTAATATTGCATAAATTCAAGAATCTTGAGTTATTTTCTCTTCATCATTTTGTTCAAGACTCTTTTTTGTGTTTTAGATCCCAACAACAAAAAAGAAAACCCCCTTTTTTTGCTTCTCTATGTCTGATAATAACCCTTTTAATCATGATTATGCATTTCCTTTCTTTGGTGAAAATCCCTCAATTTATGGTAATCAAGCCAATAACACACAAAACCCTCATCATAATCATCATGATTTTGACTATTCTTCATCTTATATGAGTAATCTCACAGAGTGTTTACATGGAGGGTCAATGGATCATTACAACACTTTGTCAAGTGCTTTTGGGATGAATAATTGTTCATCATCCTCTGAAGTTGTTTGTCCACAACCATCAATAGATCATCATCAAGAATGTTCTAGAAAGAATATTAATAGTGTTGATAATCAAATTCCATTAACACCTAATTCATTAATCTCTTCATCTTCTAATAGTGAGGTTGGTGGATGTCATGAAGAAGATTCTTCAAAAATCAAGAAAGAT-GATGAT</genome_strand>
        <mrna_strand>TTCATTTCTATTTTCCCTAAACAAGTTACTTTCTCTTTTTCCACTCTAAACTATAGTAATACATACACACTTCCCAACTCCCAAGAAAAGAAAAAAAAAAAGAAAATTCAAGAATCAATAGCTCTTGTTAATATTGCATAAATTCAAGAATCTTGAGTTATTTTCTCTTCATCATTTTGTTCAAGACTCTTTTTTGTGTTTTAGATCCCAACAACAAAAAAGAAAACCCCCTTTTTTTGCTTCTCTATGTCTGATAATAACCCTTTTAATCATGATTATGCATTTCCTTTCTTTGGTGAAAATCCCTCAATTTATGGTAATCAAGCCAATAACACACAAAACCCTCATCATAATCATCATGATTTTGACTATTCTTCATCTTATATGAGTAATCTCACAGAGTGTTTACATGGAGGGTCAATGGATCATTACAACACTTTGTCAAGTGCTTTTGGGATGAATAATTGTTCATCATCCTCTGAAGTTGTTTGTGCACAACCATCAATAGATCATCATCAAGAATGTTCTAGAAAGAATATTAATAGTGTTGATAATCAAATTCCATTAACACCTAATTCATTAATCTCTTCATCTTCTAATAGTGAGGTTGGTGGATGTCATGAAGAAGATTCTTCAAAAATCAAGAAAGATGGATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E231246" ref_strand="+" ref_description="SGN-E231246 [cLED-5-L1]">
      <seq>tcatttctattttccctaaacaagttactttctctttttccactctaaactatagtaatacatacacacttcccaactcccaagaaaagaaaaaaaaaagaaaattcaagaatcaatagctcttgttaatattgcataaattcaagaatcttgagttattttctcttcatcattttgttcaagactcttttttgtgttttagatcccaacaacaaaaaagaaaaccccctttttttgcttctctatgtctgataataacccttttaatcatgattatgcatttcctttctttggtgaaaatccctcaatttatggtaatcaagccaataacacacaaaaccctcatcataatcatcatgattttgactattcttcatcttatatgagtaatctcacagagtgtttacatggagggtcaatggatcattacaacactttgtcaagtgcttttgggatgaataattgttcatcatcctctgaagttgtttgtccacaaccatcaatagatcatcatcaagaatgttctagaaagaata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="-" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="1892" stop="757"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1592" g_stop="1057" g_length="536"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="536" r_length="536" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="-" ref_id="SGN-E231246" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E231246" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1592" e_stop="1057"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATTTCTATTTTCCCTAAACAAGTTACTTTCTCTTTTTCCACTCTAAACTATAGTAATACATACACACTTCCCAACTCCCAAGAAAAGAAAAAAAAAAGAAAATTCAAGAATCAATAGCTCTTGTTAATATTGCATAAATTCAAGAATCTTGAGTTATTTTCTCTTCATCATTTTGTTCAAGACTCTTTTTTGTGTTTTAGATCCCAACAACAAAAAAGAAAACCCCCTTTTTTTGCTTCTCTATGTCTGATAATAACCCTTTTAATCATGATTATGCATTTCCTTTCTTTGGTGAAAATCCCTCAATTTATGGTAATCAAGCCAATAACACACAAAACCCTCATCATAATCATCATGATTTTGACTATTCTTCATCTTATATGAGTAATCTCACAGAGTGTTTACATGGAGGGTCAATGGATCATTACAACACTTTGTCAAGTGCTTTTGGGATGAATAATTGTTCATCATCCTCTGAAGTTGTTTGTCCACAACCATCAATAGATCATCATCAAGAATGTTCTAGAAAGAATA</genome_strand>
        <mrna_strand>TCATTTCTATTTTCCCTAAACAAGTTACTTTCTCTTTTTCCACTCTAAACTATAGTAATACATACACACTTCCCAACTCCCAAGAAAAGAAAAAAAAAAGAAAATTCAAGAATCAATAGCTCTTGTTAATATTGCATAAATTCAAGAATCTTGAGTTATTTTCTCTTCATCATTTTGTTCAAGACTCTTTTTTGTGTTTTAGATCCCAACAACAAAAAAGAAAACCCCCTTTTTTTGCTTCTCTATGTCTGATAATAACCCTTTTAATCATGATTATGCATTTCCTTTCTTTGGTGAAAATCCCTCAATTTATGGTAATCAAGCCAATAACACACAAAACCCTCATCATAATCATCATGATTTTGACTATTCTTCATCTTATATGAGTAATCTCACAGAGTGTTTACATGGAGGGTCAATGGATCATTACAACACTTTGTCAAGTGCTTTTGGGATGAATAATTGTTCATCATCCTCTGAAGTTGTTTGTCCACAACCATCAATAGATCATCATCAAGAATGTTCTAGAAAGAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E202535" ref_strand="+" ref_description="SGN-E202535 [cLEC-6-P5]">
      <seq>ttcatttctattttccctaaacaagttactttctctttttccactctaaactatagtaatacatacacacttcccaactcccaagaaaagaaaaaaaaaaagaaaattcaagaatcaatagctcttgttaatattgcataaattcaagaatcttgagttattttctcttcatcattttgttcaagactctttgttgtgttttagatcccaacaacaaaaaagaaaaccccctttttttgcttctctatgtctgataataacccttttaatcatgattatgcatttcctttctttggtgaaaatccctcaatttatggtaatcaagccaataacacacaaaaccctcatcataatcatcatgattttgactattcttcatcttatatgagtaatctcacagagtgtttacatggagggtcaatggatcattacaacactttgtcaagtgcttttgggatgaataattgttcatcatcctctgaagttgtttgtccacaaccatcaatagatcatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="-" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="1893" stop="780"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1593" g_stop="1080" g_length="514"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="515" r_length="515" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="-" ref_id="SGN-E202535" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>514</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E202535" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1593" e_stop="1080"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCATTTCTATTTTCCCTAAACAAGTTACTTTCTCTTTTTCCACTCTAAACTATAGTAATACATACACACTTCCCAACTCCCAAGAAAAG-AAAAAAAAAAGAAAATTCAAGAATCAATAGCTCTTGTTAATATTGCATAAATTCAAGAATCTTGAGTTATTTTCTCTTCATCATTTTGTTCAAGACTCTTTTTTGTGTTTTAGATCCCAACAACAAAAAAGAAAACCCCCTTTTTTTGCTTCTCTATGTCTGATAATAACCCTTTTAATCATGATTATGCATTTCCTTTCTTTGGTGAAAATCCCTCAATTTATGGTAATCAAGCCAATAACACACAAAACCCTCATCATAATCATCATGATTTTGACTATTCTTCATCTTATATGAGTAATCTCACAGAGTGTTTACATGGAGGGTCAATGGATCATTACAACACTTTGTCAAGTGCTTTTGGGATGAATAATTGTTCATCATCCTCTGAAGTTGTTTGTCCACAACCATCAATAGATCATCA</genome_strand>
        <mrna_strand>TTCATTTCTATTTTCCCTAAACAAGTTACTTTCTCTTTTTCCACTCTAAACTATAGTAATACATACACACTTCCCAACTCCCAAGAAAAGAAAAAAAAAAAGAAAATTCAAGAATCAATAGCTCTTGTTAATATTGCATAAATTCAAGAATCTTGAGTTATTTTCTCTTCATCATTTTGTTCAAGACTCTTTGTTGTGTTTTAGATCCCAACAACAAAAAAGAAAACCCCCTTTTTTTGCTTCTCTATGTCTGATAATAACCCTTTTAATCATGATTATGCATTTCCTTTCTTTGGTGAAAATCCCTCAATTTATGGTAATCAAGCCAATAACACACAAAACCCTCATCATAATCATCATGATTTTGACTATTCTTCATCTTATATGAGTAATCTCACAGAGTGTTTACATGGAGGGTCAATGGATCATTACAACACTTTGTCAAGTGCTTTTGGGATGAATAATTGTTCATCATCCTCTGAAGTTGTTTGTCCACAACCATCAATAGATCATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E231390" ref_strand="+" ref_description="SGN-E231390 [cLED-10-L23]">
      <seq>tcatttctattttccctaaacaagatactttctctttttccactctaaactatagtaatacatacacacttcccaactcccaagaaaagaaaaaaaaaagaaaattcaagaatcaatagctcttgttaatattgcataaattcaagaatcttgagttattttctcttcatcattctgttcaagactcttttttgtgttttagatcccaacaacaaaaaagaaaaccccctttttttgcttctctatgtctgataataacccttttaatcatgattatgcattgcctttctttggtgaaaatccctcaatttatggtaatcaagccaataacacacaaaaccctcatgataatcatcatgattttgactattcttcatcttatatgagtaatctcacagagtgtttacatggagggtcaatggatcattacaacactttggcaagtgcttttgggatgaataattgttcatcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="-" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="1892" stop="820"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1592" g_stop="1120" g_length="473"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="473" r_length="473" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="-" ref_id="SGN-E231390" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>473</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E231390" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1592" e_stop="1120"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATTTCTATTTTCCCTAAACAAGTTACTTTCTCTTTTTCCACTCTAAACTATAGTAATACATACACACTTCCCAACTCCCAAGAAAAGAAAAAAAAAAGAAAATTCAAGAATCAATAGCTCTTGTTAATATTGCATAAATTCAAGAATCTTGAGTTATTTTCTCTTCATCATTTTGTTCAAGACTCTTTTTTGTGTTTTAGATCCCAACAACAAAAAAGAAAACCCCCTTTTTTTGCTTCTCTATGTCTGATAATAACCCTTTTAATCATGATTATGCATTTCCTTTCTTTGGTGAAAATCCCTCAATTTATGGTAATCAAGCCAATAACACACAAAACCCTCATCATAATCATCATGATTTTGACTATTCTTCATCTTATATGAGTAATCTCACAGAGTGTTTACATGGAGGGTCAATGGATCATTACAACACTTTGTCAAGTGCTTTTGGGATGAATAATTGTTCATCAT</genome_strand>
        <mrna_strand>TCATTTCTATTTTCCCTAAACAAGATACTTTCTCTTTTTCCACTCTAAACTATAGTAATACATACACACTTCCCAACTCCCAAGAAAAGAAAAAAAAAAGAAAATTCAAGAATCAATAGCTCTTGTTAATATTGCATAAATTCAAGAATCTTGAGTTATTTTCTCTTCATCATTCTGTTCAAGACTCTTTTTTGTGTTTTAGATCCCAACAACAAAAAAGAAAACCCCCTTTTTTTGCTTCTCTATGTCTGATAATAACCCTTTTAATCATGATTATGCATTGCCTTTCTTTGGTGAAAATCCCTCAATTTATGGTAATCAAGCCAATAACACACAAAACCCTCATGATAATCATCATGATTTTGACTATTCTTCATCTTATATGAGTAATCTCACAGAGTGTTTACATGGAGGGTCAATGGATCATTACAACACTTTGGCAAGTGCTTTTGGGATGAATAATTGTTCATCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E233489" ref_strand="+" ref_description="SGN-E233489 [cLED-9-E17]">
      <seq>tcatttctattttccctaaacaagttactttctctttttccactctaaactatagtaatacatacacacttcccaactcccaagaaaagaaaaaaaaaagaaaattcaagaatcaatagctcttgttaatattgcataaattcaagaatcttgagttattttctcttcatcattttgttcaagactcttttttgtgttttagatcccaacaacaaaaaagaaaaccccctttttttgcttctctatgtctgataataacccttttaatcatgattatgcatttcctttctttggtgaaaatccctcaatttatggtaatcaagccaataacacacaaaaccctcatcataatcatcatgattttgactattcttcatcttatatgagtaatctcacaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="-" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="1892" stop="894"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1592" g_stop="1194" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="399" r_length="399" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="-" ref_id="SGN-E233489" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>399</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E233489" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1592" e_stop="1194"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATTTCTATTTTCCCTAAACAAGTTACTTTCTCTTTTTCCACTCTAAACTATAGTAATACATACACACTTCCCAACTCCCAAGAAAAGAAAAAAAAAAGAAAATTCAAGAATCAATAGCTCTTGTTAATATTGCATAAATTCAAGAATCTTGAGTTATTTTCTCTTCATCATTTTGTTCAAGACTCTTTTTTGTGTTTTAGATCCCAACAACAAAAAAGAAAACCCCCTTTTTTTGCTTCTCTATGTCTGATAATAACCCTTTTAATCATGATTATGCATTTCCTTTCTTTGGTGAAAATCCCTCAATTTATGGTAATCAAGCCAATAACACACAAAACCCTCATCATAATCATCATGATTTTGACTATTCTTCATCTTATATGAGTAATCTCACAGA</genome_strand>
        <mrna_strand>TCATTTCTATTTTCCCTAAACAAGTTACTTTCTCTTTTTCCACTCTAAACTATAGTAATACATACACACTTCCCAACTCCCAAGAAAAGAAAAAAAAAAGAAAATTCAAGAATCAATAGCTCTTGTTAATATTGCATAAATTCAAGAATCTTGAGTTATTTTCTCTTCATCATTTTGTTCAAGACTCTTTTTTGTGTTTTAGATCCCAACAACAAAAAAGAAAACCCCCTTTTTTTGCTTCTCTATGTCTGATAATAACCCTTTTAATCATGATTATGCATTTCCTTTCTTTGGTGAAAATCCCTCAATTTATGGTAATCAAGCCAATAACACACAAAACCCTCATCATAATCATCATGATTTTGACTATTCTTCATCTTATATGAGTAATCTCACAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E553067" ref_strand="+" ref_description="SGN-E553067 [cTSB-5-O3]">
      <seq>ataagaagagcgatatttacagttttggtgttctagtgctagaagcagtgactggtagagatcctgtggactacagccgttctgctaatgaggttaatcttgttgaatggctcaaaatgatggttggaaatcgaagggccgaggaagttgtggattctgatattgaagttaggcctagtactcgtgctctgaaacgggcacttctggttgcacttagatgtgttgatcctgattcagaaaaacgaccccggatgagccaagtagttagaatgcttgaaactgaagaagttccctatcgcgaggatcgacgaaacaggagaagtagaacagccagcatggagatagaatcagtaaaggaaagttgcagcagctcagctgatgtggaaagcaaggcggggagagcagatagcagcacatctgatacaattcttggatagggactctgacacacatgcacatgactccaagtggaatgtataattgcatcatattccccccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="-" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="10847" stop="8960"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10547" g_stop="10456" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10455" i_stop="10377" i_length="79">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10376" g_stop="10167" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="302" r_length="210" r_score="0.995"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="10166" i_stop="9457" i_length="710">
            <donor d_prob="0.978" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="9456" g_stop="9260" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="499" r_length="197" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="-" ref_id="SGN-E553067" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>499</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E553067" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10547" e_stop="10456"/>
          <exon e_start="10376" e_stop="10167"/>
          <exon e_start="9456" e_stop="9260"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGAGAAGAGCGATATTTACAGTTTTGGTGTTCTAGTGCTAGAAGCAGTGACTGGTAGAGATCCTGTGGACTACAGCCGTTCTGCTAATGAGGTACCTAGAGTTAGTGATGTGATGCTTATTAATGTGTAATTTCCTTACTAACTGCACTACCCTATATTAATTTTTGAAGGTTAATCTTGTTGAATGGCTCAAAATGATGGTTGGAAATCGAAGGGCCGAGGAAGTTGTGGATTCTGATATTGAAGTTAGGCCTAGTACTCGTGCTCTGAAACGGGCACTTCTGGTTGCACTTAGATGTGTTGATCCTGATTCAGAAAAACGACCCCGGATGAGCCAAGTAGTTAGAATGCTTGAAACTGAAGAAGTTCCATATCGCGAGGTACAGTCCATTCCTGACTTCCATATCTCCCCACTCAATATGATTTCGTCTTTTCCTCTTTCTTCATTTTGGCTACAACTTTAACTTCCTTTTAAACAACATGAACCCAACCCCTGTGGATGTTTTGAAGTTACATATAGTATTCCAAACATTTGTTCATATGAAACACTTTAAGCTTTTCTAGCTCTGCCTATCCATAAAGGAGTACAATCTCTTAATTAATTGAAAAAGAATATTGGGTAATGTGGAAGTTCTGTTTTTTATGGTGAATAGTACTGCTCTTGTATTTGGTCCATGTGAACTGCTGACATAGCCTCAATAAGGTTTCATAATACCTCTCTCACTCTGCACTATGTCCAAATTTTATCTTTTTTCGTTCGAATCACTAGGCATAAGGACATTTTGTTTAGTGCACAGTCTAAATGTTTGAATACTTTAATATCCAGGTACAACTTTACCTCAACTCCAACCAAAGTTGATGTCTGTTATATGAAATCCCTCGGCCTGTGTCACCCTTTTAAGCTCATTTTACATGGTTGGACATAACATTCTATGTTTTTTGGTTCTTCCACGGGGTAGTCATAGAAAGCGGTTCTTGATCAAATAGATTTTTAACAAAGAGTTGAATCTCTGTGGATCGTGGTAGTAAGACCACTCTGTCATTTACAATACCTTGTCGCGTATGAAACCATTGTTTGATGTTTGTACAGGATCGACGAAACAGGAGAAGTAGAACAGCCAGCATGGAGATAGAATCAGTAAAGGAAAGTTGCAGCAGCTCAGCTGATGTGGAAAGCAAGGTGGGGAGAGCAGATAGCAGCACATCTGATACAATTCTTGGATAGGGACTCTGACACACATGCACATGACTCCAAGTGGAATGTATAATTGCATCATATTCCCCCCC</genome_strand>
        <mrna_strand>ATAAGAAGAGCGATATTTACAGTTTTGGTGTTCTAGTGCTAGAAGCAGTGACTGGTAGAGATCCTGTGGACTACAGCCGTTCTGCTAATGAG...............................................................................GTTAATCTTGTTGAATGGCTCAAAATGATGGTTGGAAATCGAAGGGCCGAGGAAGTTGTGGATTCTGATATTGAAGTTAGGCCTAGTACTCGTGCTCTGAAACGGGCACTTCTGGTTGCACTTAGATGTGTTGATCCTGATTCAGAAAAACGACCCCGGATGAGCCAAGTAGTTAGAATGCTTGAAACTGAAGAAGTTCCCTATCGCGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGACGAAACAGGAGAAGTAGAACAGCCAGCATGGAGATAGAATCAGTAAAGGAAAGTTGCAGCAGCTCAGCTGATGTGGAAAGCAAGGCGGGGAGAGCAGATAGCAGCACATCTGATACAATTCTTGGATAGGGACTCTGACACACATGCACATGACTCCAAGTGGAATGTATAATTGCATCATATTCCCCCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E619827" ref_strand="+" ref_description="SGN-E619827 [70521]">
      <seq>aaatagaatcagtaaaggaaagttgcagcagctcagctgatgtggaaagcaaggtgggggagagcagatagcagcacatttgatacaattcttggatagggactctggacacacatgcacatgactccaagtggaatgtataattgcatcatattccccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="-" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="9719" stop="8962"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9419" g_stop="9262" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="160" r_length="160" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="-" ref_id="SGN-E619827" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>158</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E619827" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9419" e_stop="9262"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATAGAATCAGTAAAGGAAAGTTGCAGCAGCTCAGCTGATGTGGAAAGCAAGGT-GGGGAGAGCAGATAGCAGCACATCTGATACAATTCTTGGATAGGGACTCT-GACACACATGCACATGACTCCAAGTGGAATGTATAATTGCATCATATTCCCCC</genome_strand>
        <mrna_strand>AAATAGAATCAGTAAAGGAAAGTTGCAGCAGCTCAGCTGATGTGGAAAGCAAGGTGGGGGAGAGCAGATAGCAGCACATTTGATACAATTCTTGGATAGGGACTCTGGACACACATGCACATGACTCCAAGTGGAATGTATAATTGCATCATATTCCCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E558256" ref_strand="+" ref_description="SGN-E558256 [17567]">
      <seq>caaccatcttatggaattgcaatgccttctcctttgattggcttgccagaaggctcacagctcgggtggggccattggttcacgcttagagatcttgaacttgcaacaaatcgtttctctgccgaaaatgtgcttggtgaaggtggatatggtgtggtttataaaggaaggttgatcaatggtacagaagtcgctgtaaagaagctcctaaataatcttggccaagctgagaaagagtttcgggttgaagtagaggcaattggtcatgttagacacaagaatctagtgcgtcttcttggttattgcattgaaggtgttcacaggatgctggtttatgagtatgtcaataatggaaacttggagcagtggctgcatggagctatgagacatcacggtacacttacatgggaagcccgtgtgaaggttctccttggtactgcaaaagcgcttgcttacttgcatgaagccatagaacctaaagtaatccaccgagacattaagtctagtaatatcttgattgatgacgtgttcaatgccaaggtctctgattttggattggcaaaactcttagactcaggagagagccacatcaccaccagagtcatgggcacatttggatacgtggctccagaatatgctaatactggattgttaaatgagaagagcgatatttacagttttggcgttctaatgctagaagcacgtgactgggtaagatcctgtggacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="-" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="12128" stop="10175"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11828" g_stop="11611" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="218" r_length="218" r_score="0.963"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11610" i_stop="11519" i_length="92">
            <donor d_prob="0.763" d_score="0.98"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11518" g_stop="11414" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="323" r_length="105" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11413" i_stop="11268" i_length="146">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.946" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11267" g_stop="11145" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="446" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11144" i_stop="10868" i_length="277">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10867" g_stop="10697" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="447" r_stop="617" r_length="171" r_score="0.977"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="10696" i_stop="10586" i_length="111">
            <donor d_prob="0.992" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10585" g_stop="10475" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="618" r_stop="729" r_length="112" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="-" ref_id="SGN-E558256" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>728</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E558256" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11828" e_stop="11611"/>
          <exon e_start="11518" e_stop="11414"/>
          <exon e_start="11267" e_stop="11145"/>
          <exon e_start="10867" e_stop="10697"/>
          <exon e_start="10585" e_stop="10475"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACCATCCTATGGTATTGCAATGCCTTCTCCTTTGATTGGCTTGCCAGAAGTCTCACAGCTCGGGTGGGGCCATTGGTTCACGCTTAGAGATCTTGAACTTGCAACAAATCGTTTCTCTGCTGAGAATGTGCTTGGCGAAGGTGGATATGGTGTGGTTTACAAAGGAAGGTTGATCAATGGTACAGAAGTTGCTGTAAAGAAGCTCCTAAATAATCTGTGAGTATGATTTTGAAGTGCTTATACAGGTTCTGTACATACATCTCCATGAGTGACTATTATTTATGATCTAATGATAAATTGCTCCACAGTGGCCAAGCTGAGAAAGAGTTTCGGGTTGAAGTAGAGGCAATTGGTCATGTTAGACACAAGAATCTAGTGCGTCTTCTTGGTTATTGCATTGAAGGCGTTCACAGGTATTCTCTTTTTTCATTTTAAATCATGGCAGTTCTTTCAGTATGTTAAGTTTTGTGTGTGATGACTCTTTATTCACAATGTCAACCACCATGATTTCAATTTAGTTATACTTCCGTTAACAATTTGCTTTGTTTTGGCTATAAAGGATGCTGGTTTATGAGTATGTCAATAATGGAAACTTGGAGCAGTGGCTGCATGGAGCTATGAGACATCACGGTACACTTACATGGGAAGCCCGTGTGAAGGTTCTCCTTGGTACTGCAAAAGCGTAAGTTTCCCTGATAAAAACCGATTGACAACTTTAGTTCTGTTATTTCACTTGACATTCCGTTTTTGTGAATGACCTATTTCTGCTGCACAGTCTCTTTTAACTCATCGTAAGCTAAGTCATTGCCTTGATTTAGGCAGGTTTTTACTCCTATGATGCTATAAGCCTTTGCATTTCTGACTACTTTCTTACTGCGCTTTCTATTGTTTTAGTATGAAAAGAGATAAATGACAACTAGGTTTATTATACACTAATATGGAACTTGTTCCATTTGCAGGCTTGCTTACTTGCATGAAGCCATAGAACCTAAAGTAATCCACCGAGACATTAAGTCTAGTAATATCTTGATTGATGACGCGTTCAATGCCAAGGTCTCTGATTTTGGATTGGCAAAACTATTAGACTCAGGAGAGAGCCACATCACCACCCGAGTCATGGGTACATTTGGGTACGAACTTCTCTGTCTAAAGATGTTTCATTCCTACCCTTGTCCACCTTTGCACTTGATGAGGTGTTTCTATTATGAAATACTCAGATTTCTTTCTCATTTGAATTCCAGATATGTGGCTCCAGAATATGCTAATACTGGATTGTTAAATGAGAAGAGCGATATTTACAGTTTTGGTGTTCTAGTGCTAGAAGCA-GTGACTGGTAGAGATCCTGTGGACTA</genome_strand>
        <mrna_strand>CAACCATCTTATGGAATTGCAATGCCTTCTCCTTTGATTGGCTTGCCAGAAGGCTCACAGCTCGGGTGGGGCCATTGGTTCACGCTTAGAGATCTTGAACTTGCAACAAATCGTTTCTCTGCCGAAAATGTGCTTGGTGAAGGTGGATATGGTGTGGTTTATAAAGGAAGGTTGATCAATGGTACAGAAGTCGCTGTAAAGAAGCTCCTAAATAATCT............................................................................................TGGCCAAGCTGAGAAAGAGTTTCGGGTTGAAGTAGAGGCAATTGGTCATGTTAGACACAAGAATCTAGTGCGTCTTCTTGGTTATTGCATTGAAGGTGTTCACAG..................................................................................................................................................GATGCTGGTTTATGAGTATGTCAATAATGGAAACTTGGAGCAGTGGCTGCATGGAGCTATGAGACATCACGGTACACTTACATGGGAAGCCCGTGTGAAGGTTCTCCTTGGTACTGCAAAAGC.....................................................................................................................................................................................................................................................................................GCTTGCTTACTTGCATGAAGCCATAGAACCTAAAGTAATCCACCGAGACATTAAGTCTAGTAATATCTTGATTGATGACGTGTTCAATGCCAAGGTCTCTGATTTTGGATTGGCAAAACTCTTAGACTCAGGAGAGAGCCACATCACCACCAGAGTCATGGGCACATTTGG...............................................................................................................ATACGTGGCTCCAGAATATGCTAATACTGGATTGTTAAATGAGAAGAGCGATATTTACAGTTTTGGCGTTCTAATGCTAGAAGCACGTGACTGGGTAAGATCCTGTGGACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E623789" ref_strand="+" ref_description="SGN-E623789 [88932]">
      <seq>ctgaaagcttgtttctgactattcatgataaatcaaatgaaacaacgtcggagaagatgttagtccatttgggtaggagcaaatcaagtgatgctgataacatcagccaatgtagttcaatatatcatcatgaaaggggctttagttcacagtcaggggaagagggaagttcagggacagtgaggaaacaaccatcttatggaattgcaatgccttctcctttgattggcttgccagaaggctcacagctcgggtggggccattggttcacgcttagagatcttgaacttgcaacaaatcgtttctctgccgaaaatgtgcttggtgaaggtggatatggtgtggtttataaaggaaggttgatcaatggtacagaagtcgctgtaaagaagctcctaaataatcttggccaagctgagaaagagtttcgggttgaagtagaggcaattggtcatgttagacacaagaatctagtgcgtcttcttggttattgcattgaaggtgttcacaggatgctggtttatgagtatgtcaataatggaaacttggagcagtggctgcatggagctatgagacatcacggtacacttacatgggaagcccgtgtgaaggttctccttggtactgcaaaagcgcttgcttacttgcatgaagccatagaacctaaaagtaatccaccgagacattaagtctagtaatatcttgattgatgacgtgttcaattgcccaggctctctgattttggattggcaaaactctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="-" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="12316" stop="10445"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12016" g_stop="11611" g_length="406"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="406" r_length="406" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11610" i_stop="11519" i_length="92">
            <donor d_prob="0.763" d_score="0.98"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11518" g_stop="11414" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="407" r_stop="511" r_length="105" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11413" i_stop="11268" i_length="146">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.946" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11267" g_stop="11145" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="512" r_stop="634" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11144" i_stop="10868" i_length="277">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10867" g_stop="10745" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="635" r_stop="760" r_length="126" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="-" ref_id="SGN-E623789" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>757</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E623789" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12016" e_stop="11611"/>
          <exon e_start="11518" e_stop="11414"/>
          <exon e_start="11267" e_stop="11145"/>
          <exon e_start="10867" e_stop="10745"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGAAAGCTTGTTTCTAACTATTCACGATAAACCAAATGAAACAACGTCGGAGAAGATGTTAGTCCATTTGGGTAGGAGCAAATCAAGTGATGCTGATAACATCAGCCAATGTAGTTCAATATATCATCATGAAAGGGGCTTTAGTTCACAGTCAGGGGAAGAGGGAAGTTCAGGAACAGTGCGAAAACAACCATCCTATGGTATTGCAATGCCTTCTCCTTTGATTGGCTTGCCAGAAGTCTCACAGCTCGGGTGGGGCCATTGGTTCACGCTTAGAGATCTTGAACTTGCAACAAATCGTTTCTCTGCTGAGAATGTGCTTGGCGAAGGTGGATATGGTGTGGTTTACAAAGGAAGGTTGATCAATGGTACAGAAGTTGCTGTAAAGAAGCTCCTAAATAATCTGTGAGTATGATTTTGAAGTGCTTATACAGGTTCTGTACATACATCTCCATGAGTGACTATTATTTATGATCTAATGATAAATTGCTCCACAGTGGCCAAGCTGAGAAAGAGTTTCGGGTTGAAGTAGAGGCAATTGGTCATGTTAGACACAAGAATCTAGTGCGTCTTCTTGGTTATTGCATTGAAGGCGTTCACAGGTATTCTCTTTTTTCATTTTAAATCATGGCAGTTCTTTCAGTATGTTAAGTTTTGTGTGTGATGACTCTTTATTCACAATGTCAACCACCATGATTTCAATTTAGTTATACTTCCGTTAACAATTTGCTTTGTTTTGGCTATAAAGGATGCTGGTTTATGAGTATGTCAATAATGGAAACTTGGAGCAGTGGCTGCATGGAGCTATGAGACATCACGGTACACTTACATGGGAAGCCCGTGTGAAGGTTCTCCTTGGTACTGCAAAAGCGTAAGTTTCCCTGATAAAAACCGATTGACAACTTTAGTTCTGTTATTTCACTTGACATTCCGTTTTTGTGAATGACCTATTTCTGCTGCACAGTCTCTTTTAACTCATCGTAAGCTAAGTCATTGCCTTGATTTAGGCAGGTTTTTACTCCTATGATGCTATAAGCCTTTGCATTTCTGACTACTTTCTTACTGCGCTTTCTATTGTTTTAGTATGAAAAGAGATAAATGACAACTAGGTTTATTATACACTAATATGGAACTTGTTCCATTTGCAGGCTTGCTTACTTGCATGAAGCCATAGAACCT-AAAGTAATCCACCGAGACATTAAGTCTAGTAATATCTTGATTGATGACGCGTTCAA-TGCCAAGG-TCTCTGATTTTGGATTGGCAAAACTATT</genome_strand>
        <mrna_strand>CTGAAAGCTTGTTTCTGACTATTCATGATAAATCAAATGAAACAACGTCGGAGAAGATGTTAGTCCATTTGGGTAGGAGCAAATCAAGTGATGCTGATAACATCAGCCAATGTAGTTCAATATATCATCATGAAAGGGGCTTTAGTTCACAGTCAGGGGAAGAGGGAAGTTCAGGGACAGTGAGGAAACAACCATCTTATGGAATTGCAATGCCTTCTCCTTTGATTGGCTTGCCAGAAGGCTCACAGCTCGGGTGGGGCCATTGGTTCACGCTTAGAGATCTTGAACTTGCAACAAATCGTTTCTCTGCCGAAAATGTGCTTGGTGAAGGTGGATATGGTGTGGTTTATAAAGGAAGGTTGATCAATGGTACAGAAGTCGCTGTAAAGAAGCTCCTAAATAATCT............................................................................................TGGCCAAGCTGAGAAAGAGTTTCGGGTTGAAGTAGAGGCAATTGGTCATGTTAGACACAAGAATCTAGTGCGTCTTCTTGGTTATTGCATTGAAGGTGTTCACAG..................................................................................................................................................GATGCTGGTTTATGAGTATGTCAATAATGGAAACTTGGAGCAGTGGCTGCATGGAGCTATGAGACATCACGGTACACTTACATGGGAAGCCCGTGTGAAGGTTCTCCTTGGTACTGCAAAAGC.....................................................................................................................................................................................................................................................................................GCTTGCTTACTTGCATGAAGCCATAGAACCTAAAAGTAATCCACCGAGACATTAAGTCTAGTAATATCTTGATTGATGACGTGTTCAATTGCCCAGGCTCTCTGATTTTGGATTGGCAAAACTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E598870" ref_strand="+" ref_description="SGN-E598870 [51846]">
      <seq>tctagaagaacgttggacgggtattcgcattgtcaaatacccaatgtttccaaggatattaaggttgatagagtaggtgctgcgaatgtccatgatcatcctgaaagcttgtttctgactattcatgataaatcaaatgaaacaacgtcggagaagatgttagtccatttgggtaggagcaaatcaagtgatgctgataacatcagccaatgtagttcaatatatcatcatgaaaggggctttagttcacagtcaggggaagagggaagttcagggacagtgaggaaacaaccatcttatggaattgcaatgccttctcctttgattggcttgccagaaggctcacagctcgggtggggccattggttcacgcttagagatcttgaacttgcaacaaatcgtttctctgccgaaaatgtgcttggtgaaggtggatatggtgtggtttataaaggaaggttgatcaatggtacagaagtcgctgtaaagaagctcctaaataatcttggccaagctgagaaagagtttcgggttgaagtagaggcaattggtcatgttagacacaagaatctagtgcgtcttcttggttattgcattgaaggtgttcacaggatgctggtttatgagtatgtcaataatggaaacttggagcagtggctgcatggagctatgagacatcacggtacacttacatgggaagcccgtgtgaagcgttctccttgggtacttgcaaaagcgcttgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="-" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="12416" stop="10844"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12116" g_stop="11611" g_length="506"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="506" r_length="506" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11610" i_stop="11519" i_length="92">
            <donor d_prob="0.763" d_score="0.98"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11518" g_stop="11414" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="507" r_stop="611" r_length="105" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11413" i_stop="11268" i_length="146">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.946" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11267" g_stop="11145" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="612" r_stop="737" r_length="126" r_score="0.951"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11144" i_stop="10868" i_length="277">
            <donor d_prob="0.999" d_score="0.87"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10867" g_stop="10861" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="738" r_stop="744" r_length="7" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="-" ref_id="SGN-E598870" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>741</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E598870" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12116" e_stop="11611"/>
          <exon e_start="11518" e_stop="11414"/>
          <exon e_start="11267" e_stop="11145"/>
          <exon e_start="10867" e_stop="10861"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTAGAAGGACGTTGGACGGGTATTCCCATTGCCAAATACCCCATGTTTCTAAGGATATTAAGGTTGATAGAGTAGGTGCTGCGAATGTACATGATCATCCTGAAAGCTTGTTTCTAACTATTCACGATAAACCAAATGAAACAACGTCGGAGAAGATGTTAGTCCATTTGGGTAGGAGCAAATCAAGTGATGCTGATAACATCAGCCAATGTAGTTCAATATATCATCATGAAAGGGGCTTTAGTTCACAGTCAGGGGAAGAGGGAAGTTCAGGAACAGTGCGAAAACAACCATCCTATGGTATTGCAATGCCTTCTCCTTTGATTGGCTTGCCAGAAGTCTCACAGCTCGGGTGGGGCCATTGGTTCACGCTTAGAGATCTTGAACTTGCAACAAATCGTTTCTCTGCTGAGAATGTGCTTGGCGAAGGTGGATATGGTGTGGTTTACAAAGGAAGGTTGATCAATGGTACAGAAGTTGCTGTAAAGAAGCTCCTAAATAATCTGTGAGTATGATTTTGAAGTGCTTATACAGGTTCTGTACATACATCTCCATGAGTGACTATTATTTATGATCTAATGATAAATTGCTCCACAGTGGCCAAGCTGAGAAAGAGTTTCGGGTTGAAGTAGAGGCAATTGGTCATGTTAGACACAAGAATCTAGTGCGTCTTCTTGGTTATTGCATTGAAGGCGTTCACAGGTATTCTCTTTTTTCATTTTAAATCATGGCAGTTCTTTCAGTATGTTAAGTTTTGTGTGTGATGACTCTTTATTCACAATGTCAACCACCATGATTTCAATTTAGTTATACTTCCGTTAACAATTTGCTTTGTTTTGGCTATAAAGGATGCTGGTTTATGAGTATGTCAATAATGGAAACTTGGAGCAGTGGCTGCATGGAGCTATGAGACATCACGGTACACTTACATGGGAAGCCCGTGTGAAG-GTTCTCCTT-GGTAC-TGCAAAAGCGTAAGTTTCCCTGATAAAAACCGATTGACAACTTTAGTTCTGTTATTTCACTTGACATTCCGTTTTTGTGAATGACCTATTTCTGCTGCACAGTCTCTTTTAACTCATCGTAAGCTAAGTCATTGCCTTGATTTAGGCAGGTTTTTACTCCTATGATGCTATAAGCCTTTGCATTTCTGACTACTTTCTTACTGCGCTTTCTATTGTTTTAGTATGAAAAGAGATAAATGACAACTAGGTTTATTATACACTAATATGGAACTTGTTCCATTTGCAGGCTTGCT</genome_strand>
        <mrna_strand>TCTAGAAGAACGTTGGACGGGTATTCGCATTGTCAAATACCCAATGTTTCCAAGGATATTAAGGTTGATAGAGTAGGTGCTGCGAATGTCCATGATCATCCTGAAAGCTTGTTTCTGACTATTCATGATAAATCAAATGAAACAACGTCGGAGAAGATGTTAGTCCATTTGGGTAGGAGCAAATCAAGTGATGCTGATAACATCAGCCAATGTAGTTCAATATATCATCATGAAAGGGGCTTTAGTTCACAGTCAGGGGAAGAGGGAAGTTCAGGGACAGTGAGGAAACAACCATCTTATGGAATTGCAATGCCTTCTCCTTTGATTGGCTTGCCAGAAGGCTCACAGCTCGGGTGGGGCCATTGGTTCACGCTTAGAGATCTTGAACTTGCAACAAATCGTTTCTCTGCCGAAAATGTGCTTGGTGAAGGTGGATATGGTGTGGTTTATAAAGGAAGGTTGATCAATGGTACAGAAGTCGCTGTAAAGAAGCTCCTAAATAATCT............................................................................................TGGCCAAGCTGAGAAAGAGTTTCGGGTTGAAGTAGAGGCAATTGGTCATGTTAGACACAAGAATCTAGTGCGTCTTCTTGGTTATTGCATTGAAGGTGTTCACAG..................................................................................................................................................GATGCTGGTTTATGAGTATGTCAATAATGGAAACTTGGAGCAGTGGCTGCATGGAGCTATGAGACATCACGGTACACTTACATGGGAAGCCCGTGTGAAGCGTTCTCCTTGGGTACTTGCAAAAGC.....................................................................................................................................................................................................................................................................................GCTTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E482898" ref_strand="+" ref_description="SGN-E482898 [cSTE-5-P20]">
      <seq>atcaagaacctcagctctttatctctctctctttctctttagcatagatttcctccattgcaaacaaagcttccacctttacagctttttaaggcccatattgcctccacattcacattacccaccaaccatttttttacccacaattaaaataaagcttttttaatttctcttcacaaagattggatttttgtctggttttcttagaacagttgctttaacttgtgtttttttcactatttctttttgacccattttagctgacacccttcttcttctgaactgttagctttcttggcttttgtggggttcttttggttttcacttctgcattggcttatctatgtgttttgagtctctgtttgagcaaaaaaagaaactttctttgcttctttgggttcttaaggaagaagatcaagggggttaagtttggtttctgtagatcactggtgtaaaggaggcaatggagtaaatctgagtctggaattttgcttttttctaatctgctgtgctggaaatgtcttctggggacttgaaaagtgaattgtctaggaagacatcatttttgggtctcaaactatgggttgtaatgggcttatgtgttggtgtatttatcgtcgggatactatgtatgttatcgatatgggtaacatgtangagaaaatctagaagaacgttggacggntattcacattgccaaatacccaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="-" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="13495" stop="11771"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13195" g_stop="12734" g_length="462"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="457" r_length="457" r_score="0.948"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12733" i_stop="12324" i_length="410">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12323" g_stop="12071" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="458" r_stop="710" r_length="253" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="-" ref_id="SGN-E482898" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>715</cumulative_length_of_scored_exons>
        <coverage percentage="1.007" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E482898" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13195" e_stop="12734"/>
          <exon e_start="12323" e_stop="12071"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCAAGAACCTCACCTCTTTATCTCTCTCTCTCTCTCTCTAGCATAGATTTCCTCCATTGCAAACAAAGCTTCCACCTTTACAGCTTTTTAAGGTCCATATTGCCTCTACATTCACATTACCCACCAACCATTTTGTTTAACCCACCATTAAAATAAAGTTTTTCTAGTTTTTCTTCACAAAGATTGGATTTTTGTCTGGTTTTCTTTGAACAGTTGCTTTAGCTTCTGTTTTTTTTTTCACTGTTTCTTTTTGACCCATTTCAGCTGACATCCTTCTTCTTCTGAACTGTTAGCTTTCTTGGCTTTTGTGGGGTTCTTTTGGTTTTCACTTCTGCATTGGCTTATCTATGTGTTTTGGGTTTCTGTTTGAGCAAAAAGAGAAACTTTCTTTGCTTCTTTGGGTTCTTAAGGAAGAAGATCAAGGGGGTTAAGTTTGGTTTCTGTAGATCACTGGTGTAAAGGTAACAACTTTTTTTTTTTTTTTAACTTCTGTATGAAGTCATTCTTTTCTTGATTTTGTGCCCATTTTGAACAGATTTAAGTTAGTTTTTTTTGTTGGAAGTAGTGATTTTTATTGTTCATATGGATTCTTGATTTGCTGAATCAGGAAGGGTAAGTGTTTTAGTTTTTGTGCTTACTGTTCTGAATCTAACCGCTATTTGATTTACTGGAAATTCTGGAATAGTTGTATTGTGATGTCAGCTGCCCATAGTTTAGTTGATTTGTCAATGTCTAAACTTTAACTTATTGTACTTGAAAATTTAATACTCCTAATTTAGACAGGACCATCTACTTTGTTTCATTAAAAATGTACTATTGCAAGCCACAATTGTAGAAATGTTAAATCTTAAATTATTTGTGGAATTCACAGGGGGCAATGGAGTAAATCTGAGTCTGGAATTTTGATTTCTTTTAATCTGCTGTGCTGGAAATGTCTTCTGGGGACTTGAAAAGTGATTTGTCTAGGAAGACATCATTTTTGGGTCTCAAACTATGGGTTGTAATGGGGTTATGTGTTGGTGTATTTATCGTTGGGATACTATGTATGTTGTCGATATGGGTAACGTGTAGGAGAAAATCTAGAAGGACGTTGGACGGGTATTCCCATTGCCAAATACCCCATG</genome_strand>
        <mrna_strand>ATCAAGAACCTCAGCTCTTTATCTCTCTCTCTTTCTCTTTAGCATAGATTTCCTCCATTGCAAACAAAGCTTCCACCTTTACAGCTTTTTAAGGCCCATATTGCCTCCACATTCACATTACCCACCAACCATTTT-TTT-ACCCACAATTAAAATAAAGCTTTTTTAATTTCTCTTCACAAAGATTGGATTTTTGTCTGGTTTTCTTAGAACAGTTGCTTTAAC-T-TG-TGTTTTTTTCACTATTTCTTTTTGACCCATTTTAGCTGACACCCTTCTTCTTCTGAACTGTTAGCTTTCTTGGCTTTTGTGGGGTTCTTTTGGTTTTCACTTCTGCATTGGCTTATCTATGTGTTTTGAGTCTCTGTTTGAGCAAAAAAAGAAACTTTCTTTGCTTCTTTGGGTTCTTAAGGAAGAAGATCAAGGGGGTTAAGTTTGGTTTCTGTAGATCACTGGTGTAAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCAATGGAGTAAATCTGAGTCTGGAATTTTGCTTTTTTCTAATCTGCTGTGCTGGAAATGTCTTCTGGGGACTTGAAAAGTGAATTGTCTAGGAAGACATCATTTTTGGGTCTCAAACTATGGGTTGTAATGGGCTTATGTGTTGGTGTATTTATCGTCGGGATACTATGTATGTTATCGATATGGGTAACATGTANGAGAAAATCTAGAAGAACGTTGGACGGNTATTCACATTGCCAAATACCCAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E279121" ref_strand="+" ref_description="SGN-E279121 [cLEL-4-B21]">
      <seq>gcacgagtacagctttttaaggtccatattgcctctacattcacattacccaccaaccattttgtttaacccaccattaaaataaagtttttctagtttttcttcacaaagattggatttttgtctggttttctttgaacagttgctttagcttctgtttttttttcactgtttctttttgacccatttcagctgacatccttcttcttctgaactgttagctttcttggcttttgtggggttcttttggttttcacttctgcattggcttatctatgtgttttgggtttctgtttgagcaaaaagagaaactttctttgcttctttgggttcttaaggaagaagatcaagggggttaagtttggtttctgtagatcactggtgtaaagggggcaatggagtaaatctgagtctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="-" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="13416" stop="11998"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13123" g_stop="12734" g_length="390"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="389" r_length="389" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12733" i_stop="12324" i_length="410">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12323" g_stop="12298" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="390" r_stop="415" r_length="26" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="-" ref_id="SGN-E279121" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>416</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E279121" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13123" e_stop="12734"/>
          <exon e_start="12323" e_stop="12298"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCACCTTTACAGCTTTTTAAGGTCCATATTGCCTCTACATTCACATTACCCACCAACCATTTTGTTTAACCCACCATTAAAATAAAGTTTTTCTAGTTTTTCTTCACAAAGATTGGATTTTTGTCTGGTTTTCTTTGAACAGTTGCTTTAGCTTCTGTTTTTTTTTTCACTGTTTCTTTTTGACCCATTTCAGCTGACATCCTTCTTCTTCTGAACTGTTAGCTTTCTTGGCTTTTGTGGGGTTCTTTTGGTTTTCACTTCTGCATTGGCTTATCTATGTGTTTTGGGTTTCTGTTTGAGCAAAAAGAGAAACTTTCTTTGCTTCTTTGGGTTCTTAAGGAAGAAGATCAAGGGGGTTAAGTTTGGTTTCTGTAGATCACTGGTGTAAAGGTAACAACTTTTTTTTTTTTTTTAACTTCTGTATGAAGTCATTCTTTTCTTGATTTTGTGCCCATTTTGAACAGATTTAAGTTAGTTTTTTTTGTTGGAAGTAGTGATTTTTATTGTTCATATGGATTCTTGATTTGCTGAATCAGGAAGGGTAAGTGTTTTAGTTTTTGTGCTTACTGTTCTGAATCTAACCGCTATTTGATTTACTGGAAATTCTGGAATAGTTGTATTGTGATGTCAGCTGCCCATAGTTTAGTTGATTTGTCAATGTCTAAACTTTAACTTATTGTACTTGAAAATTTAATACTCCTAATTTAGACAGGACCATCTACTTTGTTTCATTAAAAATGTACTATTGCAAGCCACAATTGTAGAAATGTTAAATCTTAAATTATTTGTGGAATTCACAGGGGGCAATGGAGTAAATCTGAGTCTG</genome_strand>
        <mrna_strand>GCACGAGTACAGCTTTTTAAGGTCCATATTGCCTCTACATTCACATTACCCACCAACCATTTTGTTTAACCCACCATTAAAATAAAGTTTTTCTAGTTTTTCTTCACAAAGATTGGATTTTTGTCTGGTTTTCTTTGAACAGTTGCTTTAGCTTCTG-TTTTTTTTTCACTGTTTCTTTTTGACCCATTTCAGCTGACATCCTTCTTCTTCTGAACTGTTAGCTTTCTTGGCTTTTGTGGGGTTCTTTTGGTTTTCACTTCTGCATTGGCTTATCTATGTGTTTTGGGTTTCTGTTTGAGCAAAAAGAGAAACTTTCTTTGCTTCTTTGGGTTCTTAAGGAAGAAGATCAAGGGGGTTAAGTTTGGTTTCTGTAGATCACTGGTGTAAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................GGGGCAATGGAGTAAATCTGAGTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E322755" ref_strand="+" ref_description="SGN-E322755 [cTOB-26-P6]">
      <seq>atagatttcctccattgcaaacaaagcttccacctttacagctttttaaggtccatattgcctctacattcacattacccaccaaccattttgtttaacccaccattaaaataaagtttttctagtttttcttcacaaagattggatttttgtctggttttctttgaacagttgctttagcttctgttttttttttcactgtttctttttgacccatttcagctgacatccttcttcttctgaactgttagctttcttggcttttgtggggttcttttggttttcacttctgcattggcttatctatgtgttttgggtttctgtttgagcaaaaagagaaactttctttgcttctttgggtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="-" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="13452" stop="12491"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13152" g_stop="12791" g_length="362"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="362" r_length="362" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="-" ref_id="SGN-E322755" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>362</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E322755" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13152" e_stop="12791"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAGATTTCCTCCATTGCAAACAAAGCTTCCACCTTTACAGCTTTTTAAGGTCCATATTGCCTCTACATTCACATTACCCACCAACCATTTTGTTTAACCCACCATTAAAATAAAGTTTTTCTAGTTTTTCTTCACAAAGATTGGATTTTTGTCTGGTTTTCTTTGAACAGTTGCTTTAGCTTCTGTTTTTTTTTTCACTGTTTCTTTTTGACCCATTTCAGCTGACATCCTTCTTCTTCTGAACTGTTAGCTTTCTTGGCTTTTGTGGGGTTCTTTTGGTTTTCACTTCTGCATTGGCTTATCTATGTGTTTTGGGTTTCTGTTTGAGCAAAAAGAGAAACTTTCTTTGCTTCTTTGGGTT</genome_strand>
        <mrna_strand>ATAGATTTCCTCCATTGCAAACAAAGCTTCCACCTTTACAGCTTTTTAAGGTCCATATTGCCTCTACATTCACATTACCCACCAACCATTTTGTTTAACCCACCATTAAAATAAAGTTTTTCTAGTTTTTCTTCACAAAGATTGGATTTTTGTCTGGTTTTCTTTGAACAGTTGCTTTAGCTTCTGTTTTTTTTTTCACTGTTTCTTTTTGACCCATTTCAGCTGACATCCTTCTTCTTCTGAACTGTTAGCTTTCTTGGCTTTTGTGGGGTTCTTTTGGTTTTCACTTCTGCATTGGCTTATCTATGTGTTTTGGGTTTCTGTTTGAGCAAAAAGAGAAACTTTCTTTGCTTCTTTGGGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E343399" ref_strand="+" ref_description="SGN-E343399 [cTOF-19-I24]">
      <seq>cttcaaatatacgattcatgccagaatgcctttgctatatcttccacaatatggcacatgagatgcatggaatactatttggcaatgtacttccagtcagtggaggtgcatatcaaccagtgtcccatggtgaggagtctttcctgcgggatgttgtgacccctatttatcaagtcattcagaaggaatctagcagaaacctgaatgggacagcaagccattcatcatggagaaattatgatgatctgaatgaatacttttggtcagataaatgttttaagctgggttggccaatggacaaagaaatcttcttattgaatagagttcaaaatcatagatgtgtaaaaacattttgtagcaagttttagatttattacatacttgtacttcattcagatgattaatatttaattcattaatactacgtggttcttgaaacaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="+" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="28737" stop="48668"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29037" g_stop="29086" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="50" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29087" i_stop="29570" i_length="484">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29571" g_stop="29705" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="185" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29706" i_stop="29782" i_length="77">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.961" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29783" g_stop="29859" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="262" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29860" i_stop="29938" i_length="79">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29939" g_stop="29975" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="263" r_stop="299" r_length="37" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="29976" i_stop="48226" i_length="18251">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="48227" g_stop="48365" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="300" r_stop="439" r_length="140" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="440" polyA_stop="451"/>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="+" ref_id="SGN-E343399" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>438</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E343399" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29037" e_stop="29086"/>
          <exon e_start="29571" e_stop="29705"/>
          <exon e_start="29783" e_stop="29859"/>
          <exon e_start="29939" e_stop="29975"/>
          <exon e_start="48227" e_stop="48365"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCAAATATACGATTCATGCCAGAATGCCTTTGCTATATCTTCCACAATGTAAGTTTGCTTTTCTATTTATTCAGTAAAAGTCTTGGATTTGTCTAGAATCTGCTGGTCAGTTTACATCAATCACTATTCACTGCTTCTGCTGTCTCTTGTGGACTGGTGCATGTGCACTATCTCACACACTGAAGGAACTGACATGATTTCATGCCAAGATAAAAGTCTTAAGGGACACTTGGGTTTTTTTTTTCTGGAAGGGTGAGTTGAGGAACAGTGCAATAACATGTGTAATGTTACCATGTGACCTCTTCACAAAATCTGATTAGTTTTGTGATGCTTGATTGATGCGATCTTCTTCTCCATAACGAACTGTCTAGTCATGTTATACATATTGCACACATGTAATGCAATAATTTTTTCAGTATTTTGGATGGATTGTGGATATTATTCTCCATTTTTTTTTCCAGAAATAGCAACATTATTTATATAAACAGTTACCCTTCATGCGTTTGCGTGCCTTTTATACTTCAAAAATCAGATGGCACATGAGATGCATGGAATACTATTTGGCAATGTACTTCCAGTCAGTGGAGGTGCATATCAACCAGTGTCCCATGGTGAGGAGTCTTTCCTGCGGGATGTTGTGACCCCTATTTATCAAGTCATTCAGAAGGTAACTCCCAGATTTGTGCTGCTTCTTCCATAGTATTGTTGTTTATCACTTTATCTGAATTATCTTCGCTGAAAAAGGAATCTAGCAGAAACCTGAATGGGACAGCAAGCCATTCATCATGGAGAAATTATGATGATCTGAATGAATACTTTTGGTAATCAATTGTGTAGCATTGTACAATTTTTTGTTTTTACAGTCTAAGGAAGAAGAGACTTATTACTCTTCCTTTGCAGGTCAGATAAATGTTTTAAGCTGGGTTGGCCAATGGACAAAAAAGCTGATTTCTTTGTGCACTCAGATAAAAGAAATACAGCAAATGTGGTATGTGTCTTTTATCAGATATATTACCATGTCTGTAAAGGTAGCATAAGAGGCATATTCAGTAGCTATGGCGACCTTTAAACTTCCATGTCATCAATTTTATTTACTACATTTTTCCACTGTATTAAATTTGCTTCCTTAAATAAGATTTGTGATTGGTTAGCAAGGTCCCATAATAACATGTGGTCTTTGGATCAACTCTTGCTGATTTATTCAGCAGGAAAATAAATCGTACTTCAAGGATGTCGTATTCTGTTGTACTTATATATGAAAAAACGGAACAACTATCTCTGTCTGCTTCACTTACTGCCAATTGGTCTTTTGTCGGGTGATTTGATTCTTTAACAGGATGTCGCATCCTGAGGCTTGAATTAGAATTCAACCCGTTCAGATGGGATGTTAGGACACAAACATTGTGTTAGATAGGGTGTTCTTCAAATAAGCAGTTTGTTTAAGCAAGTTGAGTAGGTTTCTTTGCATCACTTTTGAATAGCATTACGAATAAAATAGTCATGAGACCTTTAGCATGTGAACTGTTGTATACTGCACATGCTTTTTGAGTTCTTTGCCTCCGTAATTTTGAGCACTAAGAGTCCTTAGCTTGAGTAAGTTACTTCCAAGTCACATTGCAGGTGTAAGAAAGGTAGAGAATGTTGTTTCTCTTTGAAGGTGATTAATAAATATAAGGTAATGACAGACATTTTGAAGATAATAGTAGTTCCTACAAAAATTTAAGATGAATTGTATTTTAAATTTCGATTTGGGGTGTAAAGAGAGTTGTGCAGATGATGCAGAATCTATGTTACAATTTTTTGGAAGAATTTTTGATTTTCAAGGAATGTAGCTTGTAGATTGTAAATTTTGCAGCCAGCACAAACTTTTTGCTGATCAGTTTAGACTTTACACTACATGTATATGTGTGTGTGTGTGTGTTTGGGGGGTGGGGGTGGGTGGTTGGGTGGTTGGGGGGGTTCAGCTGTTAAGTTATTCACTTCTCTTTTAGAGCTGCTGATAAAGAGTATGGAAGTTTTCTACTGTACCAACATGTCAAAAAATTAAAACTAGAAAAGAAAAATAAAGATGAACATTTATCCTCGACTCTGGAATAAAAGAAGGCACATTATTGCTCTTCTCTGAAAGTCTGTATCTTGACTTCTGAACCGAAGATTCTGGCGTTCCTTGGCAAGTTAACTGAGGAAATGTTCAGTTCCAGAGCTAAAGATAGTAGTTCTCGAATGAGCAATCAAAAAGATTTTGGGGCATCAAGTTCAAAATTCCAGGGATTGTCAAACTTGTAGAATTTGGCTTAACTTTGTCCTCTCATTTGCTTTAATTTAGACAGTATTCCCTCATGGTTTCCTATAATGGACTAACTTAGCTTGATTTTCAGGGACATAATAATGTTGCTACTGGAAGGAGGAAGCCTAAGGCAAATTTTGTTGAAAATCGAACTTTTTGGCACCTTTATAGGAGTTTTGATCGGATGTGGATATTTTTTATATTGGCACTTCAGGTATCTCCAGACTCATGTAAACTGCTATGTTTTATTTTCCTTGTCTCTATTAAGTATAGAACATATTTACAAGGAATGAAAAGTTAGAAATATTGAAGGAGGTAGCGGAGACAGTAAGGCCACACTCACAACCATTATAAGTTAGTAAAAACACTATTTGGAATTGAACTAATCAGCAGGTCTGAATGCAAACCAATCCCCAGTAAAATGTTAAGGATCTGACGCATCAGAATTTTGGCAATATTTCTTTGATATGATCCATTATTCTTCAGGTATATTTAGAAAACCAAACTTATTTAATCTCCAGTTAGATGCCACTGAAATGTATAGTTATCTGAGGAGCATTGCTGTCTCAGAGGAATTCCGACTTAACTTATTTAATTCTTCACTACTGAGATTTTTTTTTTTGAATAAAAATTATGTCTTACAATGGGTTTCTCGCATCCAATGGTGTGTAAAGTGGTCAAGAAGTGGGAGGAGAACCATAACGTCTCAGGTTCAAATCCCATAAGAAGGAAAATGAGGCTGTGAGAAATATTGGGAAAAAAAAATTACCTTGTCGTAAAAGAAGAAGGTAATTTTTGCATTCTGAAATGCTGCCCTGGTAGAATATTTTGAAACCCTGGTGTACTACTTTCATCGAAGTTGCTTGTGAAAGTTGTAATAAAAATATGAACAAAATGGAGAAAAAGGATTCGGTGCAAGATCAAGATGGTTGCCCTTGTCGTGGGGAGAGGGGGCAGTTCTCCCTCTTTCCAAATGCAATGCCTTCCTTTACTTACTCTCTAGTTGAAATGTTAAGAGTTGAAAAAGTCTCGTTGTTGATTAAGTAGAAGAGTTGTTCAATAGCTAAGGTCTGTTGAGGCTTTAAGCACAAAGGACGACTAAAGCACTGGCTTTAATGAAAGAGGCATCAATCAACTTAGCCCTCATTTTTGAATGGGAATTGGCTGGATGAATCATCTGAATTCTTTCCGCTTTATTAGACTCTTAGGATATCATATGTGGCCTCCTCCTTTAAGACCATCTATGCTTAGCAAAACTGACATTGGAGAATGTTAGAGCTTTCTATAAATTTGTTTGATGTATTTTATATGATTAGAGTTGAAGTTCATTGGTTTAGATTTTGCTGAATTCAAGGTGTTGAAGTGTGTAACCATCTCATCTAAAAGCTTAAAGCACGTGGTAAGTCTTTTTGATATGGATGGCGGTGAGATTTGATCTCAGAGGGTGAGATTTCATTTCAGGACCTTTGCCTACTTTGGTACCATGTTGAAGTGTGTAACCATCTCATCTAAAAGCTTAAGTTGATAGAGAGAGCACACTTTTATTATTTAATTGTATACTCAACAAAGGGGTTCATTTTTCTTTCCTGGCATTGAATTAGATGGACACTGGACTGTTCAGATTCTATAACTTGGCACATGTATGCCATATATTTACTTCACATGTCCACAGTGAGTTCTCCAATTGACAGTTAGCTGATCACTTGGAGTGTTATGAGTTCTTGCTCGGTTATTGATAATAATGAGAATATTTTACAGAAGATCATCAAGGTGGTTAATAAATGATCAAGCGCAACCCAACCATTGCCATTATTATGAGTTGGGTGCTTGGGTTTATACAATACAAGAAGATATCTTGCAAAAATACTGAAGTTTCCCTTGATTTTCATGTCATCTTTATGAAATATTTGTATTGATCTCATCTCCCTCCTTCCCTCTTCAGGCAATGGTTATCATTGCATGGAATCAGTCAGGATCTTTGTCTGTGATTTTTGATGCGGATGTGTTCAAAAGCGTCTTGAGTATTTTCATAACTGCTGCTATTCTTAACGCGTTGAGAGGTAGTTGCAGTACCTTATTTGATTTCCTTTCTCTATTGAAAGTATCATTTTTCAATCTTCTAGAAACTCTTTTATTAGAAGTGTAAGGAGTGTGCATAGGTTTTACCATTTTTCATATTGTGACTGGCTTTAGCTGAGCGTTGGTCCATATATATGTTCTTTCTGCAGCTACTTTGGACATAGTCCTCAGTCTGAGAGCTTGGAGGAGCTTAAAAATCACCCAGATTCTTCGCTACCTTCTGAAATTTGCATTTGCAGCATTCTGGGTTGTCGTCATGCCTGTTGCTTATGCAAAATCTGTTCAGGATCCAGGGGGAGTTCTGAGATTCTTCAGTAATTTGGGAGGCTATATTGAAAATGAGTCACTGTATTACTACTGTGTTGCTATTTATTTGATACCAGAAATATTGGCTGCCTTTATATTTTTCTTCCCTTTCTTGCGGAAATCCATGGAGCGCTCGAACTGGCGAATCATCAGCCTCCTTATGTGGTGGGCTCAGGTCAGCATATTTATGCTTTGATACTTACATGGACTGTGCTGTCACATTTGTCTAATAGATATACTGTATCCAGCCTAAGCTTTATGTTGGAAGAGGCATGCACGAAGACATGTTCTCCTTGTTAAAGTAAGAACTCATTTATCTTCTATCTTTACACAAATAAACAAGTCTTGTTTGATAGCTTTTCTATTCTTCTGCTCCTCTCATATTTGTTTTGGTATGCTGTTCATGAATGTGGAGCAAGGTTAGCTAATAGATAATAGTGAATACTCATAATTATGGTTGATACAGTGAACTGATCTAACAATTCATTCCCTCATTTTATTTGCTCAGGTACACTCTCTTCTGGATCATGCTCCTCATAAGCAAGCTCTCATTCAGCTACTATGTTGAGGTAATGTATTCCCTCTCTATTATTCCGTTTATCCTTATAAATCCATTTTAGCATGTCTGAGGAGTGGTTTTCTTCTTTTATGATTGGCCTTATGCCACATGTGTGAAAAAATAAATTTTAAAAATATATAAAGACGATTTTTGTAACCGTCATTGATTCCTACATAACATGACTTCAACGTAATTCTGACGTGACTGCTATGTCATGAAAAGATTGTCTTAAGATACTGATGATGTGGCTTGACATGTCATAAGATTGTCGTGAATAGACTTGCCACTTTGCATTCTACTTCAGCATATCCGTCTTGTATGTTCTTGACTTCTTTCCATGTGGCTTTTTCGAAAGGGCTAAAACAGATTATTCAGCTCTATCATCAACGCCTATTGTCATGTTATTATTGTCTGGATCTTATGATATCCTACGTAATATGACAGCTGTATTCACGACGGCATATATACGCTTGAATGATGTATTCACATCGTCATCAAGTAAAAGATCTAGATACATTAGGAGGCCCTCTCAAACTTAAGAGGAAAACTAACGTGTGCTTATTTTTGGGAACATGAAAAGTTGACACTTACGCTTGTTGAAATGATGAGAATCACTACAATAAATGTTGTTGGAATATTTTCCTCCAAAAAGTCGCTGGTAACTGCATAGCGATAGAAAGTGCTTCTTGCACTACACACGATGATGAATCTGTTCTTAATCATCGAAAAGGGATATGATGTTGCAAATCTTCAATACATTAGCTTAACCTGATCTGATAGTTCAAGGACAAGAATATCAAGGTTTAGAGGAGAGTACTGGTTGGATACAAAGGAGCACACTGGTCGCTGGAGAGATAGTGGCACCAAATGATCATCGGAGAGTTGAATGGTGTTCGAATAATGGTAGACAGAGTAGCGCACAGGACACTGTTACGAAGAAAATAAGAAAATATTGGTTTAGAACAATGGTAACAGAAGCTCTTTAAATTCTACCATGATCATAGAGGCTTTGATATCATGTAAAGAAAATGGACCTCGGGCTTAACTCAACCTCAAAATTTAGTTCATGAGGTGAGGATTCACCAAGCCCTTACAAGGTGACAACGACCAATGAGTTTCATTTTCTTGTAAAGAAAATGTATCTTCAGTCTAATTCAACCCCAAAAATTAGCTAATGAGTTGATGAGTGTCCAAAAACCATATAAGGATTTCTTCAACTAATATGGGATATGCCTTTCCTTGCCACATCTAGGATTGGACATTTTGAGCGTGAACAATCTATCGTAGGGGTTTGCATCGGGTAAACCTAGAATAGGGATGGATTTGGCTCGGATAGCGTGTGTATATTAAATAAAGGGCCCATTGACATGACTAACTAACAATTTACTTATGTGCTCTTTATATAAGAGTTTCACAGTATGGCAGAATGAATTTCTATGCTAATAATAAGTAAATATTCTTTAATTAAATGCAGGATATCCAAAGGTATCATATAAATTCTTCTTTAAGTTTTTCCTTCGGGTACAATGAATCTACCTTTCATTCTGAATCTCTCTTCTCAACCAGTGTCTTGTTTGTTCTAGACACACATCTTCTGTCCATGGTAAAATCTCTTCATGCCTTTGCCCATTTTCCACCATTCCAACATTCACTCCTCCGCTATTTGGTTATGGTGGAAATGCTGAGTTGGTTTGGAATTTATCAGGAGATGCCAGGCACTGTGAAAGGAGAACATTCAGTTGGAATTGTGGTACCTAGGAGAAAGACACAGGCCTGGAATGTTGCTCCGCTAGCACTTGTGCGGGTTATTTGGAGAGCAAGAAATAGAAGAGTTTTTAAGGGGTTGAGATGAATTTTGTACTATAATGGAGTTGCATTTTTACACTTAGGTGATCTGCACTCATGAAATCCCTTTATGTATATAAGGTAGAATGTCATAGCTATCACATCTTTTTGTAGGTTTTTGACATTTTTGTTTCGTTCTTGTATACGGCACTTATTTGGCCATAATAATCAATAAGGATTACTTTATAAAAAAACTGAACTAATGTCAAGATTAGTAGTTGCTGTTAGCAACATGTCTGAAACCACTATCAGAATGTGTTTAACTATCCTGCAATGTGAACTACAACTTATGTTAGATACCTCTTGCAGCTTGAAGAATATTTTCAATTCATCCTCTTCTTTTCTTGCTCAATGCAATTGTCGGTTCCCCCATCCTGCTTAACTTGCAATGGACCGTCACATCCCCAACTAAATGGAACTCGACTGGATGACCTCCATTTTGAATTTCATATGTTAAACTCTAATTTATTGAGGTCATGAGAGGAATGGTATGACAAGCATCAATGACTGTGTGTACAAACTAAATGACTGCTTTTCGAAATGGAAGTCTCTGGATGCTTTTAGCCTGGATATTTCCTTGCACATCCAGAAGTATTGATTATTTGGTTCGAGCTATTCAAACACTAAAATGTTCTTAGAAACTGTGGTGCATGGTTGATTCGTGTGCTACAAGGTTAGACATCAATGTTTCTCTATGTTGCACTTACTCGATTCTAAATTATTTGTAAGACCAATTTCTATCCCACAGACTAACATGTGCTACTTCAGAAGTATTACTTAAGATTCAACGATGTTATTGCAACTTCTATTGGAAAAAAGTGTTCACTCCCTTTGCTTCATAAAGAAGAAAATGGAAGAAAATCAAGATGAAGCTTCAGTTTTTCCTGAGATCTCTGTGTCTTTTCAGTACGAGATGGCTCTTAATTGGATGTTCTTGTTTCCTCAGTCTCTCTTTTTGCCTCCCCCTGCAGATATTGCCATTAGTGCAGCCTACCAGGACAATTATGGATATAAGAATCACAAGCTATGACTGGCATGAGTTCTTTCCACATAGTACGTCTTTGTTAAAGTTTCTTTTCACCTGATTTATTGCGAACATATAACTAAGCATTTCGCATTTGAATGTTATTCAGTGCCACATAACATTGGAGTAGTGATTGTCCTATGGGCGCCAGTCCTTCTGGTAAGTTATGGAAGAAAAATCATTTGAAAATGACAAGCTGATGTTGAGTTCTAAGAGATATGGATTGCATGCAGGTCTATTTCATGGACACACAAATTTGGTATGCTATATTCTCTACAATTGTTGGAGGGATCTATGGTGCATTCAGCCACCTTGGCGAGGTTAGAAGCAATGAATACATTCTTTGGACTGAATTATTCAGGGATAATCCTTCATGCCCTTTATTCCTCTTGAAAAACTAGTTATACTGTTTTAACTATTTCTACCTTTTTGTTTTTTTAGATAAGGACGCTAGGGATGTTACGATCACGATTTGAGTCAATTCCTTCAGCTTTTAGTGAACGTCTCGTGCCATCTTCCAAAAAAGAAAAAAAGCATAGATATGAGGTAGTAATTACTTATATATGCAAATAGATGCTCCTGTATTCTTGCATTTTCACAATTCCTAACTCCTACTTCAACTCTTTTGATGAACTTTGTGTCACTTGGTAGGATGATTCTTTGGAGAGGAAGAACATCGCGAAGTTCTCTCAGATGTGGAATGAGTTCATACTGTCCTTGCGGATGGAGGATCTGATCAGCCATAAGTGGGGACCACGCCTGAAATTCATCATGCTACTTGGTGAATAGATTTCTGCAGTTATGCACTTTTAAATTAAGTTGGTGATTCTTTTGTCGCTGTGAACTTCCAGGGAAAGAGATCTGCTTCTTGTACCGTATTCGTCAAGTGAAGTGTCTGTTATTCAGTGGCCTCCTTTTTTGCTCGCTAGTAAGGTGATACTTGATTCCTGTTGTTGATTTTAGACAATTGAAACGATCCCCTTTTTGTCTCAGTTTTTTCACCTGCATCTTATTAGATTCCAATAGCACTGGATATGGCAAAAGATTTCAGGGGAAAAGAAGATGCTGACCTGTTCCGGAAAATCAAAAGTGATGATTTTATGCGCTCTGCAGTGATCGAGTGCTATGAGACACTTAGATATTTGCTGGTTGGAATTCTGGAAGACAAAGATGACAAGATGTAAGGCAATTTCAACTACTTCACTTGTCTTTTTCTTTATCGTTGACTATCTAAAGCTGAAGGTCCAGGTCCATATTTGTCGTACCGACAGTACTTGTAATTTGTCACTAAGAATCCATATGACTTCTTGGAATTTGGTCTCTTTTATAGGGTTGTGGAGCAGATACGCAAAGAAATAGATGAAAGCATAAAAGAAAAAAGGTTCTTAAGGAAATTTCGGATGAGTGGGTTGCCCTTACTGAATGATAAATTGGAGAGATTCTTGAATCTTCTGGTTAGTGCAATACATGTATATGCACAAACAAGTAACATGATCTAAATGTTTTCTTCTCCATCTCGAATTCAGCATTTTTGATGAAATTTTGGAGGCTGAGTTTTCTGCTTGTACGTTCTGTGTGTTTGATTGTGGTACTAACAGGTGGCAGATTATGAAGAGGAAGAGGCGAAAAGATCACCTATGATTAACCTTATCCAAGATATCATGGAAATTATCATTCAAGATGTTATGTTTGATGGCCATGAGTAAGTTCTTGACAGAAATTAGTTTTCTCAGAGAACACGAGATTTACGTAATCAAATCTGCACTATGACGAGCATCTTCAATTTTGATTTACAATTTTGTTTTCTCTGTTCTTTTTTCACTAGAATTTTGGAGAGAGCTCACCAGATTGATAGAAAGGAGCAAAGATTTGAAAGGATAAATATCTATCTTACTCAGAACAGGTCTTGGAAGGAAAAGGTATTTTGAACCTGTAATTTCTTTGTTCGTTAATTCTTTATATCATGGTTTTATATCTTACTAATGCTTATTATCTGCGTCTTTAATACTCCATTTTTTCTATAGGTTATCCGGCTTAATTTGTTATTGACTGTGAAAGAGTCTGCAATTAATGTTCCTACAAATTTGGATGCTCGCCGTCGAATTACTTTTTTCGCAAACTCCCTGTTTATGAAAATGCCAGATGCTCCCAGAGTTCGTAATATGCTTTCTTTCAGGTTAGTTCTGAGCTAATTCTGGACGACCTTTATTGCTTTGCTGGTGAGTTTGTTGTTCTCTTCTTTATGAAGCATTGCTGAAGCTATAGATCAGGAACTAAGTTATGTTGGCCTGCCACATTGCTAAAGTGGTTGTTTGACAAATGAATCTCGTAGTGTTACAAAGCAAACCTTTATGATAACGGAGAATGAATTCTGATTCTTCCAATTTTCCTTCTCAAAAAAAAAATGCTATTTCTTCCAATTTGGAACATCTTCCCATTTGCTGTTTTATGTGAACAATTAATTAAAAGATGCCTGTCCATTGTTCTGCCACATATACAACTTTTATATATCGTAGAGAAAAGTTCTCACTCTTTTATTTTTCAACTCACTGTCTCATTAAATATGAGACAGAGTAAACTATTTCTACAGATGATATTTGGGTTTGTAAAGTTCTTAAAACTGTAGTTTGAAGTATGAAGAATTGGACTAGTTAGTTGAAATTGTGACATCAAGTATGGCGTGTTATTGAATACCGTTGATTATAATAGTTAGAATATCTGAAGGAGATCGTTTTCTATTTAAAGAAAGAACGTGAGGTTCACAAGGACTAAAATGGAAAGCAGATCAAGTTTTGGGGATAAAGGGAGTACACTCCCTCAATAACAGGTTTTGGAATAGCAGTTATCAACAGATGCTTGTCCTGTACAGATACCTGACAGCTGTGGTATAAGGATTTTGTGATAAAACAGCAATTGAAAAGAAATTTCTGTAGAAAATATGGGGATTCACTTTCATATATTAAAAGAATGACAAGAGGCACTTGAGAAACTTCTTGCTTTCATTTCGTCACTTGATTGGTTTGAAATGCCAATTGTCCACATACCATACGTGTTACTTTTAAATTCTTCCTCCAAATAGCTTAAAATGCGTGATATTTATGTTGCATGCCATTTCCTCATGTTGCAACTATGTGTCCGCTTGCTGTGCTGCAATTGCAGAACTAATTTCAATATGTATTTATTGTTCAGTGTCTTGACTCCTTACTATAATGAAGATGTTCTCTATTCTGATGAGGAGCTTAACAAAGAAAATGAGGATGGTATTACCACTCTGTTTTACCTTCAGAAGATATATCCAGGCGAGTGTGTAATTGTGGCTTGTTAATTACAGTGTCACGTTACAACATAGATGAAGTACTAATCTCGATTGCCTTTATTTGACCATGAAATAGATCAATGGAAAAATTTTGAGGACCGCATCAATGATCCCAAGCTTAAGGACATAAGTAAAGACAAGAATGAATTAATTCGTTACTGGGTATCATACAGAGGACAGACACTTGCAAGGACAGGTCAGATCGCAATAACATCTTTGATATTTCATACAACTTCTGACTGTAAATTTTGTTGTCACTCAACTATGCTTTCTGTTTTGTATTTTGCTCGTGGAATTCCAGTGAGAGGAATGATGTACTATAGGGAGGCTCTTGAGCTTCAATACTTTCTGGATTTTGCAGAGGACAAAGGTGCTATTTGAATTTTATTGTTTATTTGTATAACAATATATCTGTGATACTGTGAGTTGGATGTGGTTGGTGTTAACTATCTACCCTTTACATGGCAGCAATATTTGGAGGATATCGGATCATTGATATGAATCGAACAGATTACAGAGCTTTGAAGGAGCGTGCACAGGCATTGGCTGATCTGAAGTTCACATATGTAGTGTCCTGTCAGATCTATGGTGCTCAGAAGAAGTCCAGTGAACAGCGAGACCGTAGTTGTTATGTCAATATTCTGAATCTCATGTTGACGTAAGTTGGAAATTCCGACTTTTCTTCTAGGAGAAAGAAGTGGGTATCTTCATTTCTATTTTAAACCTTTCAGGTATCCATCTTTACGGGTTGCTTACATAGATGAGCGGGATGAAGCTATTAATGGGAAGTCCGAGAAGGTTTACTACTCTGTGCTGGTGAAGGGAGGTGATAAATTGGATGAGGTATGAGTGTGACTTCAAAGAAAAACAAAGGTTTTGTCAACAAATGTTTTTTCTTGAGCGATCAATTTTCACAAAATTTCAACTTTCTTTTTCATATCACTGGAATAAGTAGTAAGTGTCTTCTTGTGCTGCCATGCTAGGAAATATACCGTATCAAGCTTCCTGGCCCGCCTAAAATTGGGGAAGGGAAACCTGAAAATCAAAATCATGCCATCATTTTTACTCGAGGAGAAGCATTACAAACCATAGATATGAATCAAGTAAGTTTTTAATTTTTCTGCTTCTCCATTAACTATGTACTACGAGTCTAACTTCTTTCTTTCTAGGATAATTATTTTGAAGAAGCTTTCAAGATGAGGAATGTATTGGAAGAATTCTTGAAACCTCATAGAAAGCGAAGACCGACAATACTAGGTTTAAGGGAGCATATTTTTACTGGAAGGTTCGCAATGTTTGATGTTATAAGCCCTTGATAGCTCACACGGTTATAGAATTGCTTACTTTATCCTTTTTTTTGTAGTGTCTCTTCGCTTGCTTGGTTCATGTCCAATCAGGAGACCAGTTTTGTAACCATCGGACAAAGAATTTTAGCAAACCCCTTGAGGTGAGTCATCTGGCTGACTTCCAATGAAATATGTTTTCTGCTGATGCATAATATGTTGAAAACCTGAAGCTGCTAACGTTCAGTTCCATTGTACCACTGTATAAGACATTGATTGTTTTAGTTTTATTTTTGTGCTGGTTTTTGGTCATTTTTTAACGATTGTTGTTTGACTCTCTCTTTTACAACAACAACAACATCATATCCACTGTCTCATAAGTAGCGTCTACACAAACCTTACCCCTACCTGAGGGAGGTAGAGAGGTTGTTTCGAAGGAGCCCCAGCTGACTCTCTCTTTTAAGGAAAGAAAATTAAATGATTTTTTCATTTTCTTTCTCCTAGCTCTCTGCCTTACATATCCACTTATTCCGCATAAAATAAGTAGTAACCAGCTCAACTTTGCAAACCCTTTTCTGCTTTGTTCATGAACATTAATTAACAGTCACATGGTAATCATCCGTTTAAGGACATCAACTTTCCAGGTACTTATAATCTAACCTAACTGTAATAAAAAAAAAGAGTAATTTTGTTGAAAATATAATTAAATATTAAAATTGTGCTCTCTCTAAAAGCTTAAGCTTTTAGATGAGATGGTTACACACTTCAACATGGTGTGAGAGCAGGCAAAGGTCCTGAGATTGAATCTCACTGCCACCAATAATAAAAAGAATTTCCACGTGCTTGGCTCATAAAAATGAATCATGCCCGCACTTGAGGGGGCGTGTTGAAAATATAATGAGATAATAAAAGTGTTCTCTCTCTAAAAGTTTAAGCTTTTAGATAAAGATGGTCACACACTTCAACTTCAACAAATTTTATTGTTCTTTCCAAGAATCAGAGGTATAAATACATTTACAGTACAGTAAATTCTAATTAAGGTAACTAAGCCTTTAATTTTCTACAAATCAGCTGCCTATAAATATATCACTATATGCATGAAAAGCCTATATATGTACACCTATGTTTTTAATGTTAATCATGTTGGTACTTGGGTTCCATATAAGGCTTCCGTGAACATGTCATCCAGTTGCTTCGCATAGCCTGTAGAGATCAAGTTCTAAGAGTCCTTCGCCGCTCCCCACTTTCCAGCATGCTCAGGGCTGGACATTTTGAGCATGGACAATATGAAATTGGACCTGTTGAAGTATGTGATTATTTTATTTAAAAGCTTAAAGCTGTTAGAAAGAACACCTTTTTTTTTAAACTGGTTACAATATCTATATATCAAATTAACAAATCAGTACATGGGTTGCAATGAAACCATATTTACAAAGCACTCTCAATTTCTATTGTCCTATATGTCTATATTGAATCTAAAACATCAACAATAGAGACAATATCATTTAAGAAAATCTGTTTACACCAAAAACACAAAAGCAAGATGAACTTTAGTTTGATCTTCTGCACTCCATTCTCAACATTGTCAAAACATCTGGAATTCCTTTTCTTCCAGGTTGTCCACCTTCTCCAAGCAGGGACGATTCTCCATCTACTCATATCCTTTGCCTGTAAGCTTGTTTCCTCCCAACTAGTTAGAGCCTGTCTGACCTCAGCATAATCTTACCAGGCATGGTCCAGGATACCCCGTTGAGGTTTAAGATAATTCTACATAGTTGTGTTGTTAACTTGTTATCTTACAGTAAAGGGAAAGATGGTTAACTATGTCTGTTTTTTCTTTACAAAAAAAAATCTTGAACGCAATGGGTTTTCTCTTCTCATCAAATTATGTTGTGCAAGGGCTATTTCTTTGGCTAGTAGCCACCCAGAACAGTATACTTTGTGTGGTATTTTAGTTTTTCCAGATGTGCTTTCATGACCAGTTGGCGATAAAAGTGCCTGAGAGCAAATCCATACCATCAACTTCATATAAATGTATCGATATATACCTGGAAAGCCCATATTATTTCTTTAGCACTAACTAATGCTGGGGATAGTTTCTTCATCTCTTGCAGTGCAAGAGTCCTATTGCAGAAAAAGTTATGCAGACATGACTGTTCTTGTGCAGCTGTAAATGTTTTGAACTGATTCTTTAAGTTCAATTCTCTTGTTGAACTTTCTGGACTTGAGATGAATATATGTTTGGCTTAGTTTAGGCTATTGTTATCTTAACTGGATTGTTTGGTTCTAAAGTAGGAAAACTGAAGAGTCTTTTCCTGGTTTGGTGTTGATTTGAGCCTAATCTTTCCTGGCTATATATTTATGATTATTCTACATTTTGACACTTAAGTTACACCCTACAATATTAAATAGCCTTGTCTTTTTGTGTCTTTGTTTTTTACTTTTTCTTTTCACCTCTTTTCTGGATACAATTTGACTTTGTTAGTCTCAATTTTGTTACTCAGGACTTAGCTCTAGTAAGTTGCACAAATTTATTGCCAGACTAATATATTGCATATATCCCTGTACTTGACCAATTGCCATCCAGTAACGATCGCATGTTGATCATAAATTAGAAGCTTTCTTTGACGCTTCTTCCAGGGGTCTCTTGCCTTTTCAACTTTCAACCTTCTAATCCAACTGTGCAGAAATGGATACTATTTGATATGATCTTTTTTACTCTTAATTGCAATTCAACAGGGCTATTTATTATTTTCATTTACTGTTTTTTCTTTTAAAGATTGACTCAACTTGTTTTGTTCTTTTTAAATTTTACAGGGTAAGATTTCATTATGGTCATCCTGATATTTTCGACAGAATCTTTCATGTAACAAGGGGTGGTATTAGCAAAGCTTCTAAAACGATTAACCTGAGTGAAGATATCTTTTCAGGTGGGATAGTGTTTTCTTAATGGTGAAACTGTAAAGGCATATTTTGGTACTTAACCGGGGTGCATCTTCAGGTTATAATTCAACTTTACGTGGAGGATTCGTAACACATCATGAGTACATCCAAGTAGGGAAGGGTCGTGATGTGGGGATGAATCAGATCTCTCAATTTGAGGCAAAGGTGGCAAATGGAAATGGAGAACAAACACTGAGTCGTGATGTCTATAGGCTTGGGCGTCGATTTGATTTCTACAGGATGTTGTCGTTCTACTTCACCACAGTTGGTTTCTACTTCAGCAGCATGGTATGCAAACTGCTCTTAGTGCTATGCATACACTTCATTGCATAAAATCTTTTGAAATATGTGACTGATGAATCAAGCAAGGTTTTTGGCTAGCTGTTGTTGTAAAAACTAATATCATTTTCATGTGATCCTAAGATAGTGAAAGAAGGCATCATCTTACATATGATCCTAAGATAATACCTTCTCTTTCAGCATTCCTCAAACAGAAAGGGGAAAACTTGAAATTATATATCAGGAAAGACCATGAGGCCAACAGGCTGTTACTCTATGTACCTGGTCTTATGACATAGTATAGATGTGAAACCTCATTCTCATTGCATTTTTTGTTTCTGAACAATGTTTTGAATCTGCATTCTGCTCATTAGTATGTAGTAAACATATTCAGAATACAATTTTAAGCAACAAATTAGTTAAACCATCAGATCGTAATTCTAATATTTGGGATACAAAATAGGAGAAAAATAAGTCTCGGGCTTGTCCCTGCATTTATTGCTCGTCACTTGCAGCTCTTTACAAGTGTACTGTGTGAAAGAATTTATCTAGTGAGAAGCTAAGCTAATTCCTTCGCTTACATAACCTAAATACAAAGATTGGTTCCGAGTGCTGATTTCTTACTTACCTTTATTGATCTACAAGGAAGTTCAGATATTTTTGTGTTCTCTTGTTGCTACACTAGCAGTAGTTATCCAGTCCTCCCAGAAAAAAATGAGTTCCTGTCTCCTTTAGTTTCAAAATTTTTCTTATAATTTATATCTGCTGGCAACTGGAGTTTTATTCTGTAGTCAATTTTCCAGGCTACAGTGCTTACTGTCTATGTGTTTCTATATGGACGGTTATATATGGTCTTGAGTGGATTGGAAAAGCGAATTCTGGAGGATCCCACAGTTCGTCAGTCCAAAGCTCTTGAAGAGGCTATGGCTCCCTCATCTATATCTCAGCTGGGCTTGTTGCTTGTACTCCCTATGGTAATGGAAATTGGGCTGGAGAGAGGATTTCGCACGGCCCTGGGTGATTTTGTAATAATGCAGCTGCAGCTTGCTTCTGTATTTTTTACATTCCAACTCGGAACAAAAGCACATTATTACGGTAGAACTATCTTGCATGGAGGTTCTAAATATCGAGCTACTGGTCGTGGCTTTGTTGTTTTTCATGCAAAGTATGCAGATAACTACAGGATGTATTCTCGCAGTCACTTTGTCAAGGGGCTTGAGCTGTTTATGCTGTTAATTGTCTATGAAGTCTATGGGGAATCATATCGTGAATCACAGTTATACTTGTTTGTTACTATTTCAATTTGGTTCTTGGTAGGTTCCTGGTTGTTTGCTCCCTTTGTGTTCAATCCGTCTGGTTTCGACTGGCAAAAGACAGTAGATGATTGGACAGATTGGAAGAGGTGGATGGGAAATCGTGGAGGCATTGGGATTTCACCGGATAAAAGTTGGGAATCTTGGTGGAATGGGGAGCAGGAACATCTAAAACACACAAATCTAAGGGGTAGAGTGATTGACATTATCCTTGCCTTCCGCTTTTTCATTTTCCAGTATGGAATTGTCTATCACCTTGATATAGCTCACGGCAGCAGAAATTTACTGGTAAGAACTTACTTGTCATTATATAGTTTTAACTTTTGTCTCTCCTTTTTGAAGAAGAGTCTTACAGTTTCCATTAAATCATCTCATACAGGTGTATGGACTTTCTTGGTTTGTTATGCTAACCGCTCTTCTGGTCTTGAAGGTACTTACTTACCTCTTAGCTTGCTTGACACATTACAACTTAACTAACCCCAATATGTTGGAAGTGGGTGAAGTAATCACATTTACCATCTTACTGTTGATGGGGGTGAATTGTTGTTTAAACAGATTGCATAATTCTATCTTTCCTAGTTATGTCTATCCACTGAATATTTAGGTTCTTTTAATTGCAAAATATCAGCTTCGTCGACAGTCCTCTAGCTTTATAACTTGATCTATCAGAGTAATTCATGCTGCACCTTTCTATATGTTTGAACTGGATACGCGAAACATTATGAAGGAACAATTATACATGCTTATTTTGGACTTGATATGTTTATCTAATCATGCTTCTTGTTATTTTGCTCGCTATAGATGGTATCAATGGGCAGACGAAGATTTGGGACTGATTTTCAGCTCATGTTCAGAATTCTGAAAGCACTTCTATTCCTTGGATTCGTATCTGTCATGACTGTGTTATTTGTTGTTTGTGGCCTGACCATGAGTGATCTATTTGCTGCCATTCTTGCCTTCGTACCGACAGGCTGGGGCATTCTTCTTGTAAGTTCATTTTCTTGTATATCTAAGGATCATCTATTTTTGTTCTGTTTCTTGCTATTTGGTTTGTTATTTGACTCCCCCCCCCCCCCCCCCCCTCTTTTACATTCTTTCAATTTGATTTACTTAGAAAGTTAAACTCTTCTCTTCAATTAGTGATCTAATTCTTGGTAATTTTTGTTTCTACGTATTATCATAGACCATTGTCCTTTAATTTTTCTTACTATATGTTGTTTTTTTCGTACGTCGATTACCTTATTATTTTTTTGTTGTTACTATTTCTTTTTTCAGCATACTTCGCCATGCTGTCTTTATTTTCTTGTCATGGCTTCTTCTTTTCCTATTTCTTTTTCCCAACTGCTTTGAAATGCTTTTCCTTGATCCAAGGGTCTATCGGAAACAACCTCTCTACCTTGGAAGTAGTGTTTATGTCTGTGTAGACTCTATCCTCCCAAGACCCCACACTTTTGGGATCACACCAGGAATGTTGTTGATCTTATTCTTGGTAATATTGCCATAGCAACTTCTGCTGCTGTTTCTCCAATAAGCTACTAGAATGAAATGAATGTTTCCCACTGTTAAGTCATACAACTAATGTACTTGCATGTTAAAATATAGCTTCATCTGATCTTTTACACCTTTGTGATTAATTTCTTCCTTTATGTTCAAAGATTGGTCAAGCATGCAGGCCCTGTTTTAAGGGACTTGGAATTTGGGATTCAGTGATGGAGTTGGCACGGGCATACGAATGCATCATGGGTCTGTTCATATTCGCGCCAGTTGTGGTCTTGTCTTGGTTCCCATTCGTATCAGAGTTCCAGACGCGGTTGCTCTTCAACCAGGCGTTCAGTAGAGGTCTCCAGATTTCAATGATTCTTGCTGGGAAGAAAGACGAATCATCACACTCTTGAAGTTTTTGTTGCTATTGTTAACCACAGTTAAATCTAGGCATTACTACTGATGAATGCACAAAGAAATCTTCTTATTGAATAGAGTTCAAAATCATAGATGTGTAAAAACATTTTGTAGCAAGTTTTAGATTTATTACATACTTGTACTTCATTCAGATGATTAATATTTAATTCATTAATACT-CGTGGTTCTTGAAAC</genome_strand>
        <mrna_strand>CTTCAAATATACGATTCATGCCAGAATGCCTTTGCTATATCTTCCACAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCACATGAGATGCATGGAATACTATTTGGCAATGTACTTCCAGTCAGTGGAGGTGCATATCAACCAGTGTCCCATGGTGAGGAGTCTTTCCTGCGGGATGTTGTGACCCCTATTTATCAAGTCATTCAGAAG.............................................................................GAATCTAGCAGAAACCTGAATGGGACAGCAAGCCATTCATCATGGAGAAATTATGATGATCTGAATGAATACTTTTG...............................................................................GTCAGATAAATGTTTTAAGCTGGGTTGGCCAATGGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................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      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E426412" ref_strand="+" ref_description="SGN-E426412 [STM-46-D23]">
      <seq>gtaagattccaatagcactggatatggcaaaagatttcaggggaaaagaagatgctgacctgttccggaaaatcaaaagtgatgattttatgcgctctgcagtgatcgaatgctatgagacacttagatatttgctggttggcattctggaagacaaagatgacaagatggttgtggagcagatacgcaaagaaatagatgaaagcataaaagaaaaaaggttcttaaggaaatttcggatgagtgggttgcccttactgaatgataaattggagagattcttgaatcttctggtggcagattatgaagatgaagaggcgaaaagatcccctatgatcaaccttatccaagatatcatggaaattatcattcaagatgttatgtttgatggccatgaaattttggaaagagctcaccagattgatagaaaggagcaaagatttgaaaggataaatatctatcttactcagaacaggtcttggaaggaaaaggttatccggcttaatttgttgttgactgtgaaagagtctgcaattaatgtgcctacaaatttggatgctcgccgtcgaattacttttttcgcaaactccctgttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="+" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="37851" stop="39568"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38067" g_stop="38071" g_length="5"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="5" r_length="5" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="38072" i_stop="38154" i_length="83">
            <donor d_prob="0.922" d_score="0.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38155" g_stop="38318" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="6" r_stop="169" r_length="164" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="38319" i_stop="38468" i_length="150">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="38469" g_stop="38592" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="170" r_stop="293" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="38593" i_stop="38736" i_length="144">
            <donor d_prob="0.879" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="38737" g_stop="38840" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="397" r_length="104" r_score="0.971"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="38841" i_stop="38963" i_length="123">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="38964" g_stop="39057" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="398" r_stop="491" r_length="94" r_score="0.989"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="39058" i_stop="39162" i_length="105">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.952" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="39163" g_stop="39268" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="492" r_stop="597" r_length="106" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="+" ref_id="SGN-E426412" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>597</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E426412" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38067" e_stop="38071"/>
          <exon e_start="38155" e_stop="38318"/>
          <exon e_start="38469" e_stop="38592"/>
          <exon e_start="38737" e_stop="38840"/>
          <exon e_start="38964" e_stop="39057"/>
          <exon e_start="39163" e_stop="39268"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAAGGTGATACTTGATTCCTGTTGTTGATTTTAGACAATTGAAACGATCCCCTTTTTGTCTCAGTTTTTTCACCTGCATCTTATTAGATTCCAATAGCACTGGATATGGCAAAAGATTTCAGGGGAAAAGAAGATGCTGACCTGTTCCGGAAAATCAAAAGTGATGATTTTATGCGCTCTGCAGTGATCGAGTGCTATGAGACACTTAGATATTTGCTGGTTGGAATTCTGGAAGACAAAGATGACAAGATGTAAGGCAATTTCAACTACTTCACTTGTCTTTTTCTTTATCGTTGACTATCTAAAGCTGAAGGTCCAGGTCCATATTTGTCGTACCGACAGTACTTGTAATTTGTCACTAAGAATCCATATGACTTCTTGGAATTTGGTCTCTTTTATAGGGTTGTGGAGCAGATACGCAAAGAAATAGATGAAAGCATAAAAGAAAAAAGGTTCTTAAGGAAATTTCGGATGAGTGGGTTGCCCTTACTGAATGATAAATTGGAGAGATTCTTGAATCTTCTGGTTAGTGCAATACATGTATATGCACAAACAAGTAACATGATCTAAATGTTTTCTTCTCCATCTCGAATTCAGCATTTTTGATGAAATTTTGGAGGCTGAGTTTTCTGCTTGTACGTTCTGTGTGTTTGATTGTGGTACTAACAGGTGGCAGATTATGAAGAGGAAGAGGCGAAAAGATCACCTATGATTAACCTTATCCAAGATATCATGGAAATTATCATTCAAGATGTTATGTTTGATGGCCATGAGTAAGTTCTTGACAGAAATTAGTTTTCTCAGAGAACACGAGATTTACGTAATCAAATCTGCACTATGACGAGCATCTTCAATTTTGATTTACAATTTTGTTTTCTCTGTTCTTTTTTCACTAGAATTTTGGAGAGAGCTCACCAGATTGATAGAAAGGAGCAAAGATTTGAAAGGATAAATATCTATCTTACTCAGAACAGGTCTTGGAAGGAAAAGGTATTTTGAACCTGTAATTTCTTTGTTCGTTAATTCTTTATATCATGGTTTTATATCTTACTAATGCTTATTATCTGCGTCTTTAATACTCCATTTTTTCTATAGGTTATCCGGCTTAATTTGTTATTGACTGTGAAAGAGTCTGCAATTAATGTTCCTACAAATTTGGATGCTCGCCGTCGAATTACTTTTTTCGCAAACTCCCTGTTTA</genome_strand>
        <mrna_strand>GTAAG...................................................................................ATTCCAATAGCACTGGATATGGCAAAAGATTTCAGGGGAAAAGAAGATGCTGACCTGTTCCGGAAAATCAAAAGTGATGATTTTATGCGCTCTGCAGTGATCGAATGCTATGAGACACTTAGATATTTGCTGGTTGGCATTCTGGAAGACAAAGATGACAAGAT......................................................................................................................................................GGTTGTGGAGCAGATACGCAAAGAAATAGATGAAAGCATAAAAGAAAAAAGGTTCTTAAGGAAATTTCGGATGAGTGGGTTGCCCTTACTGAATGATAAATTGGAGAGATTCTTGAATCTTCTG................................................................................................................................................GTGGCAGATTATGAAGATGAAGAGGCGAAAAGATCCCCTATGATCAACCTTATCCAAGATATCATGGAAATTATCATTCAAGATGTTATGTTTGATGGCCATGA...........................................................................................................................AATTTTGGAAAGAGCTCACCAGATTGATAGAAAGGAGCAAAGATTTGAAAGGATAAATATCTATCTTACTCAGAACAGGTCTTGGAAGGAAAAG.........................................................................................................GTTATCCGGCTTAATTTGTTGTTGACTGTGAAAGAGTCTGCAATTAATGTGCCTACAAATTTGGATGCTCGCCGTCGAATTACTTTTTTCGCAAACTCCCTGTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E456779" ref_strand="+" ref_description="SGN-E456779 [cSTS-30-D11]">
      <seq>gtaagattccaatagcactggatatggcaaaagatttcaggggaaaagaagatgctgacctgttccggaaaatcaaaagtgatgattttatgcgctctgcagtgatcgaatgctatgagacacttagatatttgctggttggcattctggaagacaaagatgacaagatggttgtggagcagatacgcaaagaaatagatgaaagcataaaagaaaaaaggttcttaaggaaatttcggatgagtgggttgcccttactgaatgataaattggagagattcttgaatcttctggtggcagattatgaagatgaagaggcgaaaagatcccctatgatcaaccttatccaagatatcatggaaattatcattcaagatgttatgtttgatggccatgaaattttggaaagagctcaccagattgatagaaaggagcaaagatttgaaaggataaatatctatcttactcagaacaggtcttggaaggaaaaggttatccggcttaatttgttgttgactgtgaaagagtctngcattaatgtgcctacaaatttggatgctcgccgtcgaattacttttttcgcaaactccctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="+" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="37851" stop="39564"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38067" g_stop="38071" g_length="5"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="5" r_length="5" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="38072" i_stop="38154" i_length="83">
            <donor d_prob="0.922" d_score="0.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38155" g_stop="38318" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="6" r_stop="169" r_length="164" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="38319" i_stop="38468" i_length="150">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="38469" g_stop="38592" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="170" r_stop="293" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="38593" i_stop="38736" i_length="144">
            <donor d_prob="0.879" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="38737" g_stop="38840" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="397" r_length="104" r_score="0.971"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="38841" i_stop="38963" i_length="123">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="38964" g_stop="39057" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="398" r_stop="491" r_length="94" r_score="0.989"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="39058" i_stop="39162" i_length="105">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.952" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="39163" g_stop="39264" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="492" r_stop="593" r_length="102" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="+" ref_id="SGN-E456779" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>593</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E456779" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38067" e_stop="38071"/>
          <exon e_start="38155" e_stop="38318"/>
          <exon e_start="38469" e_stop="38592"/>
          <exon e_start="38737" e_stop="38840"/>
          <exon e_start="38964" e_stop="39057"/>
          <exon e_start="39163" e_stop="39264"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAAGGTGATACTTGATTCCTGTTGTTGATTTTAGACAATTGAAACGATCCCCTTTTTGTCTCAGTTTTTTCACCTGCATCTTATTAGATTCCAATAGCACTGGATATGGCAAAAGATTTCAGGGGAAAAGAAGATGCTGACCTGTTCCGGAAAATCAAAAGTGATGATTTTATGCGCTCTGCAGTGATCGAGTGCTATGAGACACTTAGATATTTGCTGGTTGGAATTCTGGAAGACAAAGATGACAAGATGTAAGGCAATTTCAACTACTTCACTTGTCTTTTTCTTTATCGTTGACTATCTAAAGCTGAAGGTCCAGGTCCATATTTGTCGTACCGACAGTACTTGTAATTTGTCACTAAGAATCCATATGACTTCTTGGAATTTGGTCTCTTTTATAGGGTTGTGGAGCAGATACGCAAAGAAATAGATGAAAGCATAAAAGAAAAAAGGTTCTTAAGGAAATTTCGGATGAGTGGGTTGCCCTTACTGAATGATAAATTGGAGAGATTCTTGAATCTTCTGGTTAGTGCAATACATGTATATGCACAAACAAGTAACATGATCTAAATGTTTTCTTCTCCATCTCGAATTCAGCATTTTTGATGAAATTTTGGAGGCTGAGTTTTCTGCTTGTACGTTCTGTGTGTTTGATTGTGGTACTAACAGGTGGCAGATTATGAAGAGGAAGAGGCGAAAAGATCACCTATGATTAACCTTATCCAAGATATCATGGAAATTATCATTCAAGATGTTATGTTTGATGGCCATGAGTAAGTTCTTGACAGAAATTAGTTTTCTCAGAGAACACGAGATTTACGTAATCAAATCTGCACTATGACGAGCATCTTCAATTTTGATTTACAATTTTGTTTTCTCTGTTCTTTTTTCACTAGAATTTTGGAGAGAGCTCACCAGATTGATAGAAAGGAGCAAAGATTTGAAAGGATAAATATCTATCTTACTCAGAACAGGTCTTGGAAGGAAAAGGTATTTTGAACCTGTAATTTCTTTGTTCGTTAATTCTTTATATCATGGTTTTATATCTTACTAATGCTTATTATCTGCGTCTTTAATACTCCATTTTTTCTATAGGTTATCCGGCTTAATTTGTTATTGACTGTGAAAGAGTCTGCAATTAATGTTCCTACAAATTTGGATGCTCGCCGTCGAATTACTTTTTTCGCAAACTCCCTG</genome_strand>
        <mrna_strand>GTAAG...................................................................................ATTCCAATAGCACTGGATATGGCAAAAGATTTCAGGGGAAAAGAAGATGCTGACCTGTTCCGGAAAATCAAAAGTGATGATTTTATGCGCTCTGCAGTGATCGAATGCTATGAGACACTTAGATATTTGCTGGTTGGCATTCTGGAAGACAAAGATGACAAGAT......................................................................................................................................................GGTTGTGGAGCAGATACGCAAAGAAATAGATGAAAGCATAAAAGAAAAAAGGTTCTTAAGGAAATTTCGGATGAGTGGGTTGCCCTTACTGAATGATAAATTGGAGAGATTCTTGAATCTTCTG................................................................................................................................................GTGGCAGATTATGAAGATGAAGAGGCGAAAAGATCCCCTATGATCAACCTTATCCAAGATATCATGGAAATTATCATTCAAGATGTTATGTTTGATGGCCATGA...........................................................................................................................AATTTTGGAAAGAGCTCACCAGATTGATAGAAAGGAGCAAAGATTTGAAAGGATAAATATCTATCTTACTCAGAACAGGTCTTGGAAGGAAAAG.........................................................................................................GTTATCCGGCTTAATTTGTTGTTGACTGTGAAAGAGTCTNGCATTAATGTGCCTACAAATTTGGATGCTCGCCGTCGAATTACTTTTTTCGCAAACTCCCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E316522" ref_strand="+" ref_description="SGN-E316522 [cTOA-25-G10]">
      <seq>tgcacaggcattggctgatctgaagttcacatatgtagtgtcctgtcagatctatggtgctcagaagaagtccagtgaacagcgagaccgtagttgttatgtcaatattctgaatctcatgttgacgtatccatctttacgggttgcttacatagatgagcgggatgaagctattaatgggaagtccgagaaggtttactactctgtgctggtgaagggaggtgataaattggatgaggaaatataccgtatcaagcttcctggcccgcctaaaattggggaagggaaacctgaaaatcaaaatcatgccatcatttttactcgaggagaagcattacaaaccatagatatgaatcaagataattattttgaagaagctttcaagatgaggaatgtattggaagaattcttgaaacctcatagaaagcgaagaccgacaatactaggtttaagggagcatatttttactggaagtgtctcttcgcttgcttggttcatgtccaatcaggagaccagttttgtaaccatcggacaaagaattttagcaaaccccttgagggtaagatttcattatggtcatcctgatattttcgacagaatcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="+" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="40687" stop="44900"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40987" g_stop="41112" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="126" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41113" i_stop="41185" i_length="73">
            <donor d_prob="0.722" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41186" g_stop="41297" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="127" r_stop="238" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="41298" i_stop="41437" i_length="140">
            <donor d_prob="0.926" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="41438" g_stop="41557" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="358" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="41558" i_stop="41623" i_length="66">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.847" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="41624" g_stop="41739" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="359" r_stop="474" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="41740" i_stop="41817" i_length="78">
            <donor d_prob="0.582" d_score="1.00"/>
            <acceptor a_prob="0.899" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="41818" g_stop="41901" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="475" r_stop="558" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="41902" i_stop="44554" i_length="2653">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="44555" g_stop="44600" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="559" r_stop="604" r_length="46" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="+" ref_id="SGN-E316522" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>604</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E316522" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40987" e_stop="41112"/>
          <exon e_start="41186" e_stop="41297"/>
          <exon e_start="41438" e_stop="41557"/>
          <exon e_start="41624" e_stop="41739"/>
          <exon e_start="41818" e_stop="41901"/>
          <exon e_start="44555" e_stop="44600"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCACAGGCATTGGCTGATCTGAAGTTCACATATGTAGTGTCCTGTCAGATCTATGGTGCTCAGAAGAAGTCCAGTGAACAGCGAGACCGTAGTTGTTATGTCAATATTCTGAATCTCATGTTGACGTAAGTTGGAAATTCCGACTTTTCTTCTAGGAGAAAGAAGTGGGTATCTTCATTTCTATTTTAAACCTTTCAGGTATCCATCTTTACGGGTTGCTTACATAGATGAGCGGGATGAAGCTATTAATGGGAAGTCCGAGAAGGTTTACTACTCTGTGCTGGTGAAGGGAGGTGATAAATTGGATGAGGTATGAGTGTGACTTCAAAGAAAAACAAAGGTTTTGTCAACAAATGTTTTTTCTTGAGCGATCAATTTTCACAAAATTTCAACTTTCTTTTTCATATCACTGGAATAAGTAGTAAGTGTCTTCTTGTGCTGCCATGCTAGGAAATATACCGTATCAAGCTTCCTGGCCCGCCTAAAATTGGGGAAGGGAAACCTGAAAATCAAAATCATGCCATCATTTTTACTCGAGGAGAAGCATTACAAACCATAGATATGAATCAAGTAAGTTTTTAATTTTTCTGCTTCTCCATTAACTATGTACTACGAGTCTAACTTCTTTCTTTCTAGGATAATTATTTTGAAGAAGCTTTCAAGATGAGGAATGTATTGGAAGAATTCTTGAAACCTCATAGAAAGCGAAGACCGACAATACTAGGTTTAAGGGAGCATATTTTTACTGGAAGGTTCGCAATGTTTGATGTTATAAGCCCTTGATAGCTCACACGGTTATAGAATTGCTTACTTTATCCTTTTTTTTGTAGTGTCTCTTCGCTTGCTTGGTTCATGTCCAATCAGGAGACCAGTTTTGTAACCATCGGACAAAGAATTTTAGCAAACCCCTTGAGGTGAGTCATCTGGCTGACTTCCAATGAAATATGTTTTCTGCTGATGCATAATATGTTGAAAACCTGAAGCTGCTAACGTTCAGTTCCATTGTACCACTGTATAAGACATTGATTGTTTTAGTTTTATTTTTGTGCTGGTTTTTGGTCATTTTTTAACGATTGTTGTTTGACTCTCTCTTTTACAACAACAACAACATCATATCCACTGTCTCATAAGTAGCGTCTACACAAACCTTACCCCTACCTGAGGGAGGTAGAGAGGTTGTTTCGAAGGAGCCCCAGCTGACTCTCTCTTTTAAGGAAAGAAAATTAAATGATTTTTTCATTTTCTTTCTCCTAGCTCTCTGCCTTACATATCCACTTATTCCGCATAAAATAAGTAGTAACCAGCTCAACTTTGCAAACCCTTTTCTGCTTTGTTCATGAACATTAATTAACAGTCACATGGTAATCATCCGTTTAAGGACATCAACTTTCCAGGTACTTATAATCTAACCTAACTGTAATAAAAAAAAAGAGTAATTTTGTTGAAAATATAATTAAATATTAAAATTGTGCTCTCTCTAAAAGCTTAAGCTTTTAGATGAGATGGTTACACACTTCAACATGGTGTGAGAGCAGGCAAAGGTCCTGAGATTGAATCTCACTGCCACCAATAATAAAAAGAATTTCCACGTGCTTGGCTCATAAAAATGAATCATGCCCGCACTTGAGGGGGCGTGTTGAAAATATAATGAGATAATAAAAGTGTTCTCTCTCTAAAAGTTTAAGCTTTTAGATAAAGATGGTCACACACTTCAACTTCAACAAATTTTATTGTTCTTTCCAAGAATCAGAGGTATAAATACATTTACAGTACAGTAAATTCTAATTAAGGTAACTAAGCCTTTAATTTTCTACAAATCAGCTGCCTATAAATATATCACTATATGCATGAAAAGCCTATATATGTACACCTATGTTTTTAATGTTAATCATGTTGGTACTTGGGTTCCATATAAGGCTTCCGTGAACATGTCATCCAGTTGCTTCGCATAGCCTGTAGAGATCAAGTTCTAAGAGTCCTTCGCCGCTCCCCACTTTCCAGCATGCTCAGGGCTGGACATTTTGAGCATGGACAATATGAAATTGGACCTGTTGAAGTATGTGATTATTTTATTTAAAAGCTTAAAGCTGTTAGAAAGAACACCTTTTTTTTTAAACTGGTTACAATATCTATATATCAAATTAACAAATCAGTACATGGGTTGCAATGAAACCATATTTACAAAGCACTCTCAATTTCTATTGTCCTATATGTCTATATTGAATCTAAAACATCAACAATAGAGACAATATCATTTAAGAAAATCTGTTTACACCAAAAACACAAAAGCAAGATGAACTTTAGTTTGATCTTCTGCACTCCATTCTCAACATTGTCAAAACATCTGGAATTCCTTTTCTTCCAGGTTGTCCACCTTCTCCAAGCAGGGACGATTCTCCATCTACTCATATCCTTTGCCTGTAAGCTTGTTTCCTCCCAACTAGTTAGAGCCTGTCTGACCTCAGCATAATCTTACCAGGCATGGTCCAGGATACCCCGTTGAGGTTTAAGATAATTCTACATAGTTGTGTTGTTAACTTGTTATCTTACAGTAAAGGGAAAGATGGTTAACTATGTCTGTTTTTTCTTTACAAAAAAAAATCTTGAACGCAATGGGTTTTCTCTTCTCATCAAATTATGTTGTGCAAGGGCTATTTCTTTGGCTAGTAGCCACCCAGAACAGTATACTTTGTGTGGTATTTTAGTTTTTCCAGATGTGCTTTCATGACCAGTTGGCGATAAAAGTGCCTGAGAGCAAATCCATACCATCAACTTCATATAAATGTATCGATATATACCTGGAAAGCCCATATTATTTCTTTAGCACTAACTAATGCTGGGGATAGTTTCTTCATCTCTTGCAGTGCAAGAGTCCTATTGCAGAAAAAGTTATGCAGACATGACTGTTCTTGTGCAGCTGTAAATGTTTTGAACTGATTCTTTAAGTTCAATTCTCTTGTTGAACTTTCTGGACTTGAGATGAATATATGTTTGGCTTAGTTTAGGCTATTGTTATCTTAACTGGATTGTTTGGTTCTAAAGTAGGAAAACTGAAGAGTCTTTTCCTGGTTTGGTGTTGATTTGAGCCTAATCTTTCCTGGCTATATATTTATGATTATTCTACATTTTGACACTTAAGTTACACCCTACAATATTAAATAGCCTTGTCTTTTTGTGTCTTTGTTTTTTACTTTTTCTTTTCACCTCTTTTCTGGATACAATTTGACTTTGTTAGTCTCAATTTTGTTACTCAGGACTTAGCTCTAGTAAGTTGCACAAATTTATTGCCAGACTAATATATTGCATATATCCCTGTACTTGACCAATTGCCATCCAGTAACGATCGCATGTTGATCATAAATTAGAAGCTTTCTTTGACGCTTCTTCCAGGGGTCTCTTGCCTTTTCAACTTTCAACCTTCTAATCCAACTGTGCAGAAATGGATACTATTTGATATGATCTTTTTTACTCTTAATTGCAATTCAACAGGGCTATTTATTATTTTCATTTACTGTTTTTTCTTTTAAAGATTGACTCAACTTGTTTTGTTCTTTTTAAATTTTACAGGGTAAGATTTCATTATGGTCATCCTGATATTTTCGACAGAATCTTT</genome_strand>
        <mrna_strand>TGCACAGGCATTGGCTGATCTGAAGTTCACATATGTAGTGTCCTGTCAGATCTATGGTGCTCAGAAGAAGTCCAGTGAACAGCGAGACCGTAGTTGTTATGTCAATATTCTGAATCTCATGTTGAC.........................................................................GTATCCATCTTTACGGGTTGCTTACATAGATGAGCGGGATGAAGCTATTAATGGGAAGTCCGAGAAGGTTTACTACTCTGTGCTGGTGAAGGGAGGTGATAAATTGGATGAG............................................................................................................................................GAAATATACCGTATCAAGCTTCCTGGCCCGCCTAAAATTGGGGAAGGGAAACCTGAAAATCAAAATCATGCCATCATTTTTACTCGAGGAGAAGCATTACAAACCATAGATATGAATCAA..................................................................GATAATTATTTTGAAGAAGCTTTCAAGATGAGGAATGTATTGGAAGAATTCTTGAAACCTCATAGAAAGCGAAGACCGACAATACTAGGTTTAAGGGAGCATATTTTTACTGGAAG..............................................................................TGTCTCTTCGCTTGCTTGGTTCATGTCCAATCAGGAGACCAGTTTTGTAACCATCGGACAAAGAATTTTAGCAAACCCCTTGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTAAGATTTCATTATGGTCATCCTGATATTTTCGACAGAATCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E603493" ref_strand="+" ref_description="SGN-E603493 [56583]">
      <seq>tcgaggagaagcattacaaaccatagatatgaatcaagataattattttgaagaagctttcaagatgaggaatgtattggaagaattcttgaaacctcataggaagcgaagaccgacaatactaggtttaagggagcatatttttactggaaggagaccagttttgtaaccatcggacaaagaattttggccaatcccttaagggtaagatttcattatggtcatcctgatattttcgacagaatctttcatgtaacaaggggtggtattagcaaagcttctaaaacaattaacctgagtgaagatatcttttcaggttataattcaactttacgtggaggattcgtaacacatcatgagtacatccaagtagggaagggtcgtgatgtggggatgaatcagatctctcagtttgaggcaaaggtggcaaatggaaatggagaacaaacactgagccgtgatgtctataggcttgggcgtcgatttgacttctacaggatgttgtcattctacttcaccacagttggtttttacttcagcagcatggctacagtgcttactgtctatgtgtttctatatggacggttatatatggtcttgagtgggctggaaaagcgaattctggaggattccacagttcgtcagtccaaagctcttgaagaggctatggctccctcctctatatctcagctgggcttgttgcttgtactccctatggtaatggaacattgggctggagagaggatttcgcacgggccttgggtgatcttgtaataatgcagttgcagcttgcttctgtatttttcacatttccaattcggaacaaaagcacattattacgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="+" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="41221" stop="46355"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41521" g_stop="41557" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="37" r_length="37" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41558" i_stop="41623" i_length="66">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.847" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41624" g_stop="41739" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="38" r_stop="153" r_length="116" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="41740" i_stop="41851" i_length="112">
            <donor d_prob="0.582" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="41852" g_stop="41901" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="154" r_stop="203" r_length="50" r_score="0.920"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="41902" i_stop="44554" i_length="2653">
            <donor d_prob="0.989" d_score="0.92"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="44555" g_stop="44667" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="204" r_stop="316" r_length="113" r_score="0.991"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="44668" i_stop="44738" i_length="71">
            <donor d_prob="0.343" d_score="0.98"/>
            <acceptor a_prob="0.760" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="44739" g_stop="44968" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="546" r_length="230" r_score="0.978"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="44969" i_stop="45762" i_length="794">
            <donor d_prob="0.971" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="45763" g_stop="46055" g_length="293"/>
          <reference_exon_boundary r_type="cDNA" r_start="547" r_stop="842" r_length="296" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="+" ref_id="SGN-E603493" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>839</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E603493" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41521" e_stop="41557"/>
          <exon e_start="41624" e_stop="41739"/>
          <exon e_start="41852" e_stop="41901"/>
          <exon e_start="44555" e_stop="44667"/>
          <exon e_start="44739" e_stop="44968"/>
          <exon e_start="45763" e_stop="46055"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGAGGAGAAGCATTACAAACCATAGATATGAATCAAGTAAGTTTTTAATTTTTCTGCTTCTCCATTAACTATGTACTACGAGTCTAACTTCTTTCTTTCTAGGATAATTATTTTGAAGAAGCTTTCAAGATGAGGAATGTATTGGAAGAATTCTTGAAACCTCATAGAAAGCGAAGACCGACAATACTAGGTTTAAGGGAGCATATTTTTACTGGAAGGTTCGCAATGTTTGATGTTATAAGCCCTTGATAGCTCACACGGTTATAGAATTGCTTACTTTATCCTTTTTTTTGTAGTGTCTCTTCGCTTGCTTGGTTCATGTCCAATCAGGAGACCAGTTTTGTAACCATCGGACAAAGAATTTTAGCAAACCCCTTGAGGTGAGTCATCTGGCTGACTTCCAATGAAATATGTTTTCTGCTGATGCATAATATGTTGAAAACCTGAAGCTGCTAACGTTCAGTTCCATTGTACCACTGTATAAGACATTGATTGTTTTAGTTTTATTTTTGTGCTGGTTTTTGGTCATTTTTTAACGATTGTTGTTTGACTCTCTCTTTTACAACAACAACAACATCATATCCACTGTCTCATAAGTAGCGTCTACACAAACCTTACCCCTACCTGAGGGAGGTAGAGAGGTTGTTTCGAAGGAGCCCCAGCTGACTCTCTCTTTTAAGGAAAGAAAATTAAATGATTTTTTCATTTTCTTTCTCCTAGCTCTCTGCCTTACATATCCACTTATTCCGCATAAAATAAGTAGTAACCAGCTCAACTTTGCAAACCCTTTTCTGCTTTGTTCATGAACATTAATTAACAGTCACATGGTAATCATCCGTTTAAGGACATCAACTTTCCAGGTACTTATAATCTAACCTAACTGTAATAAAAAAAAAGAGTAATTTTGTTGAAAATATAATTAAATATTAAAATTGTGCTCTCTCTAAAAGCTTAAGCTTTTAGATGAGATGGTTACACACTTCAACATGGTGTGAGAGCAGGCAAAGGTCCTGAGATTGAATCTCACTGCCACCAATAATAAAAAGAATTTCCACGTGCTTGGCTCATAAAAATGAATCATGCCCGCACTTGAGGGGGCGTGTTGAAAATATAATGAGATAATAAAAGTGTTCTCTCTCTAAAAGTTTAAGCTTTTAGATAAAGATGGTCACACACTTCAACTTCAACAAATTTTATTGTTCTTTCCAAGAATCAGAGGTATAAATACATTTACAGTACAGTAAATTCTAATTAAGGTAACTAAGCCTTTAATTTTCTACAAATCAGCTGCCTATAAATATATCACTATATGCATGAAAAGCCTATATATGTACACCTATGTTTTTAATGTTAATCATGTTGGTACTTGGGTTCCATATAAGGCTTCCGTGAACATGTCATCCAGTTGCTTCGCATAGCCTGTAGAGATCAAGTTCTAAGAGTCCTTCGCCGCTCCCCACTTTCCAGCATGCTCAGGGCTGGACATTTTGAGCATGGACAATATGAAATTGGACCTGTTGAAGTATGTGATTATTTTATTTAAAAGCTTAAAGCTGTTAGAAAGAACACCTTTTTTTTTAAACTGGTTACAATATCTATATATCAAATTAACAAATCAGTACATGGGTTGCAATGAAACCATATTTACAAAGCACTCTCAATTTCTATTGTCCTATATGTCTATATTGAATCTAAAACATCAACAATAGAGACAATATCATTTAAGAAAATCTGTTTACACCAAAAACACAAAAGCAAGATGAACTTTAGTTTGATCTTCTGCACTCCATTCTCAACATTGTCAAAACATCTGGAATTCCTTTTCTTCCAGGTTGTCCACCTTCTCCAAGCAGGGACGATTCTCCATCTACTCATATCCTTTGCCTGTAAGCTTGTTTCCTCCCAACTAGTTAGAGCCTGTCTGACCTCAGCATAATCTTACCAGGCATGGTCCAGGATACCCCGTTGAGGTTTAAGATAATTCTACATAGTTGTGTTGTTAACTTGTTATCTTACAGTAAAGGGAAAGATGGTTAACTATGTCTGTTTTTTCTTTACAAAAAAAAATCTTGAACGCAATGGGTTTTCTCTTCTCATCAAATTATGTTGTGCAAGGGCTATTTCTTTGGCTAGTAGCCACCCAGAACAGTATACTTTGTGTGGTATTTTAGTTTTTCCAGATGTGCTTTCATGACCAGTTGGCGATAAAAGTGCCTGAGAGCAAATCCATACCATCAACTTCATATAAATGTATCGATATATACCTGGAAAGCCCATATTATTTCTTTAGCACTAACTAATGCTGGGGATAGTTTCTTCATCTCTTGCAGTGCAAGAGTCCTATTGCAGAAAAAGTTATGCAGACATGACTGTTCTTGTGCAGCTGTAAATGTTTTGAACTGATTCTTTAAGTTCAATTCTCTTGTTGAACTTTCTGGACTTGAGATGAATATATGTTTGGCTTAGTTTAGGCTATTGTTATCTTAACTGGATTGTTTGGTTCTAAAGTAGGAAAACTGAAGAGTCTTTTCCTGGTTTGGTGTTGATTTGAGCCTAATCTTTCCTGGCTATATATTTATGATTATTCTACATTTTGACACTTAAGTTACACCCTACAATATTAAATAGCCTTGTCTTTTTGTGTCTTTGTTTTTTACTTTTTCTTTTCACCTCTTTTCTGGATACAATTTGACTTTGTTAGTCTCAATTTTGTTACTCAGGACTTAGCTCTAGTAAGTTGCACAAATTTATTGCCAGACTAATATATTGCATATATCCCTGTACTTGACCAATTGCCATCCAGTAACGATCGCATGTTGATCATAAATTAGAAGCTTTCTTTGACGCTTCTTCCAGGGGTCTCTTGCCTTTTCAACTTTCAACCTTCTAATCCAACTGTGCAGAAATGGATACTATTTGATATGATCTTTTTTACTCTTAATTGCAATTCAACAGGGCTATTTATTATTTTCATTTACTGTTTTTTCTTTTAAAGATTGACTCAACTTGTTTTGTTCTTTTTAAATTTTACAGGGTAAGATTTCATTATGGTCATCCTGATATTTTCGACAGAATCTTTCATGTAACAAGGGGTGGTATTAGCAAAGCTTCTAAAACGATTAACCTGAGTGAAGATATCTTTTCAGGTGGGATAGTGTTTTCTTAATGGTGAAACTGTAAAGGCATATTTTGGTACTTAACCGGGGTGCATCTTCAGGTTATAATTCAACTTTACGTGGAGGATTCGTAACACATCATGAGTACATCCAAGTAGGGAAGGGTCGTGATGTGGGGATGAATCAGATCTCTCAATTTGAGGCAAAGGTGGCAAATGGAAATGGAGAACAAACACTGAGTCGTGATGTCTATAGGCTTGGGCGTCGATTTGATTTCTACAGGATGTTGTCGTTCTACTTCACCACAGTTGGTTTCTACTTCAGCAGCATGGTATGCAAACTGCTCTTAGTGCTATGCATACACTTCATTGCATAAAATCTTTTGAAATATGTGACTGATGAATCAAGCAAGGTTTTTGGCTAGCTGTTGTTGTAAAAACTAATATCATTTTCATGTGATCCTAAGATAGTGAAAGAAGGCATCATCTTACATATGATCCTAAGATAATACCTTCTCTTTCAGCATTCCTCAAACAGAAAGGGGAAAACTTGAAATTATATATCAGGAAAGACCATGAGGCCAACAGGCTGTTACTCTATGTACCTGGTCTTATGACATAGTATAGATGTGAAACCTCATTCTCATTGCATTTTTTGTTTCTGAACAATGTTTTGAATCTGCATTCTGCTCATTAGTATGTAGTAAACATATTCAGAATACAATTTTAAGCAACAAATTAGTTAAACCATCAGATCGTAATTCTAATATTTGGGATACAAAATAGGAGAAAAATAAGTCTCGGGCTTGTCCCTGCATTTATTGCTCGTCACTTGCAGCTCTTTACAAGTGTACTGTGTGAAAGAATTTATCTAGTGAGAAGCTAAGCTAATTCCTTCGCTTACATAACCTAAATACAAAGATTGGTTCCGAGTGCTGATTTCTTACTTACCTTTATTGATCTACAAGGAAGTTCAGATATTTTTGTGTTCTCTTGTTGCTACACTAGCAGTAGTTATCCAGTCCTCCCAGAAAAAAATGAGTTCCTGTCTCCTTTAGTTTCAAAATTTTTCTTATAATTTATATCTGCTGGCAACTGGAGTTTTATTCTGTAGTCAATTTTCCAGGCTACAGTGCTTACTGTCTATGTGTTTCTATATGGACGGTTATATATGGTCTTGAGTGGATTGGAAAAGCGAATTCTGGAGGATCCCACAGTTCGTCAGTCCAAAGCTCTTGAAGAGGCTATGGCTCCCTCATCTATATCTCAGCTGGGCTTGTTGCTTGTACTCCCTATGGTAATGGAA-ATTGGGCTGGAGAGAGGATTTCGCAC-GGCCCTGGGTGATTTTGTAATAATGCAGCTGCAGCTTGCTTCTGTATTTTTTACA-TTCCAACTCGGAACAAAAGCACATTATTACGG</genome_strand>
        <mrna_strand>TCGAGGAGAAGCATTACAAACCATAGATATGAATCAA..................................................................GATAATTATTTTGAAGAAGCTTTCAAGATGAGGAATGTATTGGAAGAATTCTTGAAACCTCATAGGAAGCGAAGACCGACAATACTAGGTTTAAGGGAGCATATTTTTACTGGAAG................................................................................................................GAGACCAGTTTTGTAACCATCGGACAAAGAATTTTGGCCAATCCCTTAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTAAGATTTCATTATGGTCATCCTGATATTTTCGACAGAATCTTTCATGTAACAAGGGGTGGTATTAGCAAAGCTTCTAAAACAATTAACCTGAGTGAAGATATCTTTTCAG.......................................................................GTTATAATTCAACTTTACGTGGAGGATTCGTAACACATCATGAGTACATCCAAGTAGGGAAGGGTCGTGATGTGGGGATGAATCAGATCTCTCAGTTTGAGGCAAAGGTGGCAAATGGAAATGGAGAACAAACACTGAGCCGTGATGTCTATAGGCTTGGGCGTCGATTTGACTTCTACAGGATGTTGTCATTCTACTTCACCACAGTTGGTTTTTACTTCAGCAGCATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACAGTGCTTACTGTCTATGTGTTTCTATATGGACGGTTATATATGGTCTTGAGTGGGCTGGAAAAGCGAATTCTGGAGGATTCCACAGTTCGTCAGTCCAAAGCTCTTGAAGAGGCTATGGCTCCCTCCTCTATATCTCAGCTGGGCTTGTTGCTTGTACTCCCTATGGTAATGGAACATTGGGCTGGAGAGAGGATTTCGCACGGGCCTTGGGTGATCTTGTAATAATGCAGTTGCAGCTTGCTTCTGTATTTTTCACATTTCCAATTCGGAACAAAAGCACATTATTACGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E434186" ref_strand="+" ref_description="SGN-E434186 [STM-59-H5]">
      <seq>ggccgtgatgtctataggcttgggcgtcgatttgacttctacaggatgttgtcattctacttcaccacagttggtttttacttcagcagcatggctacagtgcttactgtctatgtgtttctatatggacggttatatatggtcttgagtgggctggaaaagcgaattctggaggattccacagttcgtcagtccaaagctcttgaagaggctatggctccctcctctatatctcagctgggcttgttgcttgtactccctatggtaatggaaattgggctggagagaggatttcgcacggccctgggtgattttgtaataatgcagctgcagcttgcttctgtattttttacattccaactcggaacaaaagcacattattacggtagaactatcttgcatggaggttctaaatatcgagctactggtcgtggctttgttgtttttcatgcaaagtatgcagataactacagaatgtattctcgcagtcactttgtcaaggggcttgagctgtttattctgttaattgtctatgaagtctatggggaatcatatcgcgattcacagttatacttgtttgttactatttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="+" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="44577" stop="46560"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44876" g_stop="44968" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="93" r_length="93" r_score="0.946"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="44969" i_stop="45762" i_length="794">
            <donor d_prob="0.971" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="45763" g_stop="46260" g_length="498"/>
          <reference_exon_boundary r_type="cDNA" r_start="94" r_stop="591" r_length="498" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="+" ref_id="SGN-E434186" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>591</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E434186" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44876" e_stop="44968"/>
          <exon e_start="45763" e_stop="46260"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTCGTGATGTCTATAGGCTTGGGCGTCGATTTGATTTCTACAGGATGTTGTCGTTCTACTTCACCACAGTTGGTTTCTACTTCAGCAGCATGGTATGCAAACTGCTCTTAGTGCTATGCATACACTTCATTGCATAAAATCTTTTGAAATATGTGACTGATGAATCAAGCAAGGTTTTTGGCTAGCTGTTGTTGTAAAAACTAATATCATTTTCATGTGATCCTAAGATAGTGAAAGAAGGCATCATCTTACATATGATCCTAAGATAATACCTTCTCTTTCAGCATTCCTCAAACAGAAAGGGGAAAACTTGAAATTATATATCAGGAAAGACCATGAGGCCAACAGGCTGTTACTCTATGTACCTGGTCTTATGACATAGTATAGATGTGAAACCTCATTCTCATTGCATTTTTTGTTTCTGAACAATGTTTTGAATCTGCATTCTGCTCATTAGTATGTAGTAAACATATTCAGAATACAATTTTAAGCAACAAATTAGTTAAACCATCAGATCGTAATTCTAATATTTGGGATACAAAATAGGAGAAAAATAAGTCTCGGGCTTGTCCCTGCATTTATTGCTCGTCACTTGCAGCTCTTTACAAGTGTACTGTGTGAAAGAATTTATCTAGTGAGAAGCTAAGCTAATTCCTTCGCTTACATAACCTAAATACAAAGATTGGTTCCGAGTGCTGATTTCTTACTTACCTTTATTGATCTACAAGGAAGTTCAGATATTTTTGTGTTCTCTTGTTGCTACACTAGCAGTAGTTATCCAGTCCTCCCAGAAAAAAATGAGTTCCTGTCTCCTTTAGTTTCAAAATTTTTCTTATAATTTATATCTGCTGGCAACTGGAGTTTTATTCTGTAGTCAATTTTCCAGGCTACAGTGCTTACTGTCTATGTGTTTCTATATGGACGGTTATATATGGTCTTGAGTGGATTGGAAAAGCGAATTCTGGAGGATCCCACAGTTCGTCAGTCCAAAGCTCTTGAAGAGGCTATGGCTCCCTCATCTATATCTCAGCTGGGCTTGTTGCTTGTACTCCCTATGGTAATGGAAATTGGGCTGGAGAGAGGATTTCGCACGGCCCTGGGTGATTTTGTAATAATGCAGCTGCAGCTTGCTTCTGTATTTTTTACATTCCAACTCGGAACAAAAGCACATTATTACGGTAGAACTATCTTGCATGGAGGTTCTAAATATCGAGCTACTGGTCGTGGCTTTGTTGTTTTTCATGCAAAGTATGCAGATAACTACAGGATGTATTCTCGCAGTCACTTTGTCAAGGGGCTTGAGCTGTTTATGCTGTTAATTGTCTATGAAGTCTATGGGGAATCATATCGTGAATCACAGTTATACTTGTTTGTTACTATTTCA</genome_strand>
        <mrna_strand>GGCCGTGATGTCTATAGGCTTGGGCGTCGATTTGACTTCTACAGGATGTTGTCATTCTACTTCACCACAGTTGGTTTTTACTTCAGCAGCATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACAGTGCTTACTGTCTATGTGTTTCTATATGGACGGTTATATATGGTCTTGAGTGGGCTGGAAAAGCGAATTCTGGAGGATTCCACAGTTCGTCAGTCCAAAGCTCTTGAAGAGGCTATGGCTCCCTCCTCTATATCTCAGCTGGGCTTGTTGCTTGTACTCCCTATGGTAATGGAAATTGGGCTGGAGAGAGGATTTCGCACGGCCCTGGGTGATTTTGTAATAATGCAGCTGCAGCTTGCTTCTGTATTTTTTACATTCCAACTCGGAACAAAAGCACATTATTACGGTAGAACTATCTTGCATGGAGGTTCTAAATATCGAGCTACTGGTCGTGGCTTTGTTGTTTTTCATGCAAAGTATGCAGATAACTACAGAATGTATTCTCGCAGTCACTTTGTCAAGGGGCTTGAGCTGTTTATTCTGTTAATTGTCTATGAAGTCTATGGGGAATCATATCGCGATTCACAGTTATACTTGTTTGTTACTATTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E405149" ref_strand="+" ref_description="SGN-E405149 [PPC-16-B14]">
      <seq>ggccgtgatgtctataagcttgggcgtcgatttgacttctacaggatgttgtcattctacttcaccacagttggtttttacttcagcagcatggctacagtgcttactgtctatgtgtttctatatggacggttatatatggtcttgagtgggctggaaaagcgaattctggaggattccacagttcgtcagtccaaagctcttgaagaggctatggctccctcctctatatctcagctgggcttgttgcttgtactccctatggtaatggaaattgggctggagagaagatttcgcacggccctgggtgattttgtaataatgcagctgcagcttgcttctgtattttttacattccaactcggaacaaaagcacattattacggtagaactatcttgcatggaggttctaaatatcgagctactggtcgtggctttgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="+" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="44577" stop="46411"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44876" g_stop="44968" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="93" r_length="93" r_score="0.935"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="44969" i_stop="45762" i_length="794">
            <donor d_prob="0.971" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="45763" g_stop="46111" g_length="349"/>
          <reference_exon_boundary r_type="cDNA" r_start="94" r_stop="442" r_length="349" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="+" ref_id="SGN-E405149" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>442</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E405149" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44876" e_stop="44968"/>
          <exon e_start="45763" e_stop="46111"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTCGTGATGTCTATAGGCTTGGGCGTCGATTTGATTTCTACAGGATGTTGTCGTTCTACTTCACCACAGTTGGTTTCTACTTCAGCAGCATGGTATGCAAACTGCTCTTAGTGCTATGCATACACTTCATTGCATAAAATCTTTTGAAATATGTGACTGATGAATCAAGCAAGGTTTTTGGCTAGCTGTTGTTGTAAAAACTAATATCATTTTCATGTGATCCTAAGATAGTGAAAGAAGGCATCATCTTACATATGATCCTAAGATAATACCTTCTCTTTCAGCATTCCTCAAACAGAAAGGGGAAAACTTGAAATTATATATCAGGAAAGACCATGAGGCCAACAGGCTGTTACTCTATGTACCTGGTCTTATGACATAGTATAGATGTGAAACCTCATTCTCATTGCATTTTTTGTTTCTGAACAATGTTTTGAATCTGCATTCTGCTCATTAGTATGTAGTAAACATATTCAGAATACAATTTTAAGCAACAAATTAGTTAAACCATCAGATCGTAATTCTAATATTTGGGATACAAAATAGGAGAAAAATAAGTCTCGGGCTTGTCCCTGCATTTATTGCTCGTCACTTGCAGCTCTTTACAAGTGTACTGTGTGAAAGAATTTATCTAGTGAGAAGCTAAGCTAATTCCTTCGCTTACATAACCTAAATACAAAGATTGGTTCCGAGTGCTGATTTCTTACTTACCTTTATTGATCTACAAGGAAGTTCAGATATTTTTGTGTTCTCTTGTTGCTACACTAGCAGTAGTTATCCAGTCCTCCCAGAAAAAAATGAGTTCCTGTCTCCTTTAGTTTCAAAATTTTTCTTATAATTTATATCTGCTGGCAACTGGAGTTTTATTCTGTAGTCAATTTTCCAGGCTACAGTGCTTACTGTCTATGTGTTTCTATATGGACGGTTATATATGGTCTTGAGTGGATTGGAAAAGCGAATTCTGGAGGATCCCACAGTTCGTCAGTCCAAAGCTCTTGAAGAGGCTATGGCTCCCTCATCTATATCTCAGCTGGGCTTGTTGCTTGTACTCCCTATGGTAATGGAAATTGGGCTGGAGAGAGGATTTCGCACGGCCCTGGGTGATTTTGTAATAATGCAGCTGCAGCTTGCTTCTGTATTTTTTACATTCCAACTCGGAACAAAAGCACATTATTACGGTAGAACTATCTTGCATGGAGGTTCTAAATATCGAGCTACTGGTCGTGGCTTTGTTG</genome_strand>
        <mrna_strand>GGCCGTGATGTCTATAAGCTTGGGCGTCGATTTGACTTCTACAGGATGTTGTCATTCTACTTCACCACAGTTGGTTTTTACTTCAGCAGCATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACAGTGCTTACTGTCTATGTGTTTCTATATGGACGGTTATATATGGTCTTGAGTGGGCTGGAAAAGCGAATTCTGGAGGATTCCACAGTTCGTCAGTCCAAAGCTCTTGAAGAGGCTATGGCTCCCTCCTCTATATCTCAGCTGGGCTTGTTGCTTGTACTCCCTATGGTAATGGAAATTGGGCTGGAGAGAAGATTTCGCACGGCCCTGGGTGATTTTGTAATAATGCAGCTGCAGCTTGCTTCTGTATTTTTTACATTCCAACTCGGAACAAAAGCACATTATTACGGTAGAACTATCTTGCATGGAGGTTCTAAATATCGAGCTACTGGTCGTGGCTTTGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E455763" ref_strand="-" ref_description="SGN-E455763 [cSTS-27-A24]">
      <seq>cagtaaatttctgctgccgtgagctatatcaaggtgatagacaattccatactggaaaatgaaaaagcggaaggcaaggataatttcaatcactctaccccttatatttgtgtgttttagatgttcctgctccccattccaccaagattcccaacttttatctggtgaaatcccaatgcctccacgatttcccatccacctcttccaatctgtccaatcatctactgtcttttgccagtcgaaaccagatggattgaacacaaaaggagcaaacaaccaagaacctaccaagaaccacattgaaatagtaacaaacaagtataactgtgaatcgcgatatgattccccatagacttcatagacaattaacagaataaacagctcaagccccttgacaaagtgactgcgagaaaacattctgtagttatctgcatactttgcatgaaaaccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaactcggactagttctctctctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="-" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="46860" stop="22807"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46560" g_stop="46095" g_length="466"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="465" r_length="465" r_score="0.955"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46094" i_stop="45298" i_length="797">
            <donor d_prob="0.000" d_score="0.80"/>
            <acceptor a_prob="0.129" a_score="0.58"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="45297" g_stop="45253" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="466" r_stop="508" r_length="43" r_score="0.578"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="-" ref_id="SGN-E455763" ref_strand="-">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>511</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E455763" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="46560" e_stop="46095"/>
          <exon e_start="45297" e_stop="45253"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGTAAATTTCTGCTGCCGTGAGCTATATCAAGGTGATAGACAATTCCATACTGGAAAATGAAAAAGCGGAAGGCAAGGATAATGTCAATCACTCTACCCCTTAGATTTGTGTGTTTTAGATGTTCCTGCTCCCCATTCCACCAAGATTCCCAACTTTTATCCGGTGAAATCCCAATGCCTCCACGATTTCCCATCCACCTCTTCCAATCTGTCCAATCATCTACTGTCTTTTGCCAGTCGAAACCAGACGGATTGAACACAAAGGGAGCAAACAACCAGGAACCTACCAAGAACCAAATTGAAATAGTAACAAACAAGTATAACTGTGATTCACGATATGATTCCCCATAGACTTCATAGACAATTAACAGCATAAACAGCTCAAGCCCCTTGACAAAGTGACTGCGAGAATACATCCTGTAGTTATCTGCATACTTTGCATGAAAAACAACAAAGCCACGACCAGTAGCTCGATATTTAGAACCTCCATGCAAGATAGTTCTACCGTAATAATGTGCTTTTGTTCCGAGTTGGAATGTAAAAAATACAGAAGCAAGCTGCAGCTGCATTATTACAAAATCACCCAGGGCCGTGCGAAATCCTCTCTCCAGCCCAATTTCCATTACCATAGGGAGTACAAGCAACAAGCCCAGCTGAGATATAGATGAGGGAGCCATAGCCTCTTCAAGAGCTTTGGACTGACGAACTGTGGGATCCTCCAGAATTCGCTTTTCCAATCCACTCAAGACCATATATAACCGTCCATATAGAAACACATAGACAGTAAGCACTGTAGCCTGGAAAATTGACTACAGAATAAAACTCCAGTTGCCAGCAGATATAAATTATAAGAAAAATTTTGAAACTAAAGGAGACAGGAACTCATTTTTTTCTGGGAGGACTGGATAACTACTGCTAGTGTAGCAACAAGAGAACACAAAAATATCTGAACTTCCTTGTAGATCAATAAAGGTAAGTAAGAAATCAGCACTCGGAACCAATCTTTGTATTTAGGTTATGTAAGCGAAGGAATTAGCTTAGCTTCTCACTAGATAAATTCTTTCACACAGTACACTTGTAAAGAGCTGCAAGTGACGAGCAATAAATGCAGGGACAAGCCCGAGACTTATTTTTCTCCTATTTTGTATCCCAAATATTAGAATTACGATCTGATGGTTTAACTAATTTGTTGCTTAAAATTGTATTCTGAATATGTTTACTACATACTAATGAGCAGAATGCAGATTCAAAACATTGTTCAGAAACAAAAAATGCAATGAGAATGAGGTTTCACATCTATACTATGT</genome_strand>
        <mrna_strand>CAGTAAATTTCTGCTGCCGTGAGCTATATCAAGGTGATAGACAATTCCATACTGGAAAATGAAAAAGCGGAAGGCAAGGATAATTTCAATCACTCTACCCCTTATATTTGTGTGTTTTAGATGTTCCTGCTCCCCATTCCACCAAGATTCCCAACTTTTATCTGGTGAAATCCCAATGCCTCCACGATTTCCCATCCACCTCTTCCAATCTGTCCAATCATCTACTGTCTTTTGCCAGTCGAAACCAGATGGATTGAACACAAAAGGAGCAAACAACCAAGAACCTACCAAGAACCACATTGAAATAGTAACAAACAAGTATAACTGTGAATCGCGATATGATTCCCCATAGACTTCATAGACAATTAACAGAATAAACAGCTCAAGCCCCTTGACAAAGTGACTGCGAGAAAACATTCTGTAGTTATCTGCATACTTTGCATGAAAACCAA-AAAAAAAAAAAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAACTCGGACT-AGTTCTCT-CTCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E242115" ref_strand="+" ref_description="SGN-E242115 [cLED-37-E20]">
      <seq>tgattttgtaataatgcagctgcagcttgcttctgtattttttacattccaactcggaacaaaagcacattattacggtagaactatcttgcatggaggttctaaatatcgagctactggtcgtggctttgttgtttttcatgcaaagtatgcagataactacaggatgtattctcgcagtcactttgtcaaggggcttgagctgtttatgctgttaattgtctatgaagtctatggggaatcatatcgtgaatcacagttatacttgtttgttactatttcaatttggttcttggtaggttcctggttgtttgctccctttgtgttcaatccgtctggtttcgactggcaaaagacagtagatgattggacagattggaagaggtggatgggaaatcgtggaggcattgggatttcaccggataaaagttgggaatcttggtggaatggggagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="+" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="45678" stop="46732"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45978" g_stop="46432" g_length="455"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="455" r_length="455" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="+" ref_id="SGN-E242115" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>455</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E242115" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45978" e_stop="46432"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATTTTGTAATAATGCAGCTGCAGCTTGCTTCTGTATTTTTTACATTCCAACTCGGAACAAAAGCACATTATTACGGTAGAACTATCTTGCATGGAGGTTCTAAATATCGAGCTACTGGTCGTGGCTTTGTTGTTTTTCATGCAAAGTATGCAGATAACTACAGGATGTATTCTCGCAGTCACTTTGTCAAGGGGCTTGAGCTGTTTATGCTGTTAATTGTCTATGAAGTCTATGGGGAATCATATCGTGAATCACAGTTATACTTGTTTGTTACTATTTCAATTTGGTTCTTGGTAGGTTCCTGGTTGTTTGCTCCCTTTGTGTTCAATCCGTCTGGTTTCGACTGGCAAAAGACAGTAGATGATTGGACAGATTGGAAGAGGTGGATGGGAAATCGTGGAGGCATTGGGATTTCACCGGATAAAAGTTGGGAATCTTGGTGGAATGGGGAGC</genome_strand>
        <mrna_strand>TGATTTTGTAATAATGCAGCTGCAGCTTGCTTCTGTATTTTTTACATTCCAACTCGGAACAAAAGCACATTATTACGGTAGAACTATCTTGCATGGAGGTTCTAAATATCGAGCTACTGGTCGTGGCTTTGTTGTTTTTCATGCAAAGTATGCAGATAACTACAGGATGTATTCTCGCAGTCACTTTGTCAAGGGGCTTGAGCTGTTTATGCTGTTAATTGTCTATGAAGTCTATGGGGAATCATATCGTGAATCACAGTTATACTTGTTTGTTACTATTTCAATTTGGTTCTTGGTAGGTTCCTGGTTGTTTGCTCCCTTTGTGTTCAATCCGTCTGGTTTCGACTGGCAAAAGACAGTAGATGATTGGACAGATTGGAAGAGGTGGATGGGAAATCGTGGAGGCATTGGGATTTCACCGGATAAAAGTTGGGAATCTTGGTGGAATGGGGAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E704804" ref_strand="+" ref_description="SGN-E704804 [FA25BC05]">
      <seq>gaagtctatggggaatcatatcgtgaatcacagttatacttgtttgttactatttcaatttggttcttggtaggttcctggttgtttgctccctttgtgttcaatccgtctggtttcgactggcaaaagacagtagatgattggacagattggaagaggtggatgggaaatcgtggaggcattgggatttcaccggataaaagttgggaatcttggtggaatggggagcaggaacatctaaaacacacaaatctaaggggtagagtgattgacattatccttgccttccgctttttcattttccagtatggaattgtctatcaccttgatatagctcacggcagcagaaatttactggtgtatggactttcttggtttgttatgctaaccgctcttctggtcttgaagatggtatcaatgggcagacgaagatttgggactgattttcagctcatgttcagaattctgaaagcacttctattccttggattcgtatctgtcatgactgtgttatttgttgtttgtggcctgaccatgagtgatctatttgctgccattcttgccttcgtaccgacaggctggggcattcttcttattggtcaagcatgcaggccctgttttaagggacttggaatttgggattcagtgatggagttggcacgggcatacgaatgcatcatgggtctgttcatattcgcgccagttgtggtcttgtcttggttcccattcgtatcagagttccagacgcggttgctcttcaaccaggcgttcagtagaggtctccagatttccatgattcttgctgggaagaaagacgaatcatcacactcttgaagtttttgttgctattgnntaccacagttaaatcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="+" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="45904" stop="48484"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46204" g_stop="46560" g_length="357"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="357" r_length="357" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46561" i_stop="46651" i_length="91">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.447" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46652" g_stop="46702" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="358" r_stop="408" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46703" i_stop="47073" i_length="371">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="47074" g_stop="47259" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="409" r_stop="594" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="47260" i_stop="47927" i_length="668">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="47928" g_stop="48203" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="595" r_stop="870" r_length="276" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="+" ref_id="SGN-E704804" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>870</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E704804" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46204" e_stop="46560"/>
          <exon e_start="46652" e_stop="46702"/>
          <exon e_start="47074" e_stop="47259"/>
          <exon e_start="47928" e_stop="48203"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGTCTATGGGGAATCATATCGTGAATCACAGTTATACTTGTTTGTTACTATTTCAATTTGGTTCTTGGTAGGTTCCTGGTTGTTTGCTCCCTTTGTGTTCAATCCGTCTGGTTTCGACTGGCAAAAGACAGTAGATGATTGGACAGATTGGAAGAGGTGGATGGGAAATCGTGGAGGCATTGGGATTTCACCGGATAAAAGTTGGGAATCTTGGTGGAATGGGGAGCAGGAACATCTAAAACACACAAATCTAAGGGGTAGAGTGATTGACATTATCCTTGCCTTCCGCTTTTTCATTTTCCAGTATGGAATTGTCTATCACCTTGATATAGCTCACGGCAGCAGAAATTTACTGGTAAGAACTTACTTGTCATTATATAGTTTTAACTTTTGTCTCTCCTTTTTGAAGAAGAGTCTTACAGTTTCCATTAAATCATCTCATACAGGTGTATGGACTTTCTTGGTTTGTTATGCTAACCGCTCTTCTGGTCTTGAAGGTACTTACTTACCTCTTAGCTTGCTTGACACATTACAACTTAACTAACCCCAATATGTTGGAAGTGGGTGAAGTAATCACATTTACCATCTTACTGTTGATGGGGGTGAATTGTTGTTTAAACAGATTGCATAATTCTATCTTTCCTAGTTATGTCTATCCACTGAATATTTAGGTTCTTTTAATTGCAAAATATCAGCTTCGTCGACAGTCCTCTAGCTTTATAACTTGATCTATCAGAGTAATTCATGCTGCACCTTTCTATATGTTTGAACTGGATACGCGAAACATTATGAAGGAACAATTATACATGCTTATTTTGGACTTGATATGTTTATCTAATCATGCTTCTTGTTATTTTGCTCGCTATAGATGGTATCAATGGGCAGACGAAGATTTGGGACTGATTTTCAGCTCATGTTCAGAATTCTGAAAGCACTTCTATTCCTTGGATTCGTATCTGTCATGACTGTGTTATTTGTTGTTTGTGGCCTGACCATGAGTGATCTATTTGCTGCCATTCTTGCCTTCGTACCGACAGGCTGGGGCATTCTTCTTGTAAGTTCATTTTCTTGTATATCTAAGGATCATCTATTTTTGTTCTGTTTCTTGCTATTTGGTTTGTTATTTGACTCCCCCCCCCCCCCCCCCCCTCTTTTACATTCTTTCAATTTGATTTACTTAGAAAGTTAAACTCTTCTCTTCAATTAGTGATCTAATTCTTGGTAATTTTTGTTTCTACGTATTATCATAGACCATTGTCCTTTAATTTTTCTTACTATATGTTGTTTTTTTCGTACGTCGATTACCTTATTATTTTTTTGTTGTTACTATTTCTTTTTTCAGCATACTTCGCCATGCTGTCTTTATTTTCTTGTCATGGCTTCTTCTTTTCCTATTTCTTTTTCCCAACTGCTTTGAAATGCTTTTCCTTGATCCAAGGGTCTATCGGAAACAACCTCTCTACCTTGGAAGTAGTGTTTATGTCTGTGTAGACTCTATCCTCCCAAGACCCCACACTTTTGGGATCACACCAGGAATGTTGTTGATCTTATTCTTGGTAATATTGCCATAGCAACTTCTGCTGCTGTTTCTCCAATAAGCTACTAGAATGAAATGAATGTTTCCCACTGTTAAGTCATACAACTAATGTACTTGCATGTTAAAATATAGCTTCATCTGATCTTTTACACCTTTGTGATTAATTTCTTCCTTTATGTTCAAAGATTGGTCAAGCATGCAGGCCCTGTTTTAAGGGACTTGGAATTTGGGATTCAGTGATGGAGTTGGCACGGGCATACGAATGCATCATGGGTCTGTTCATATTCGCGCCAGTTGTGGTCTTGTCTTGGTTCCCATTCGTATCAGAGTTCCAGACGCGGTTGCTCTTCAACCAGGCGTTCAGTAGAGGTCTCCAGATTTCAATGATTCTTGCTGGGAAGAAAGACGAATCATCACACTCTTGAAGTTTTTGTTGCTATTGTTAACCACAGTTAAATCTA</genome_strand>
        <mrna_strand>GAAGTCTATGGGGAATCATATCGTGAATCACAGTTATACTTGTTTGTTACTATTTCAATTTGGTTCTTGGTAGGTTCCTGGTTGTTTGCTCCCTTTGTGTTCAATCCGTCTGGTTTCGACTGGCAAAAGACAGTAGATGATTGGACAGATTGGAAGAGGTGGATGGGAAATCGTGGAGGCATTGGGATTTCACCGGATAAAAGTTGGGAATCTTGGTGGAATGGGGAGCAGGAACATCTAAAACACACAAATCTAAGGGGTAGAGTGATTGACATTATCCTTGCCTTCCGCTTTTTCATTTTCCAGTATGGAATTGTCTATCACCTTGATATAGCTCACGGCAGCAGAAATTTACTG...........................................................................................GTGTATGGACTTTCTTGGTTTGTTATGCTAACCGCTCTTCTGGTCTTGAAG...................................................................................................................................................................................................................................................................................................................................................................................ATGGTATCAATGGGCAGACGAAGATTTGGGACTGATTTTCAGCTCATGTTCAGAATTCTGAAAGCACTTCTATTCCTTGGATTCGTATCTGTCATGACTGTGTTATTTGTTGTTTGTGGCCTGACCATGAGTGATCTATTTGCTGCCATTCTTGCCTTCGTACCGACAGGCTGGGGCATTCTTCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGTCAAGCATGCAGGCCCTGTTTTAAGGGACTTGGAATTTGGGATTCAGTGATGGAGTTGGCACGGGCATACGAATGCATCATGGGTCTGTTCATATTCGCGCCAGTTGTGGTCTTGTCTTGGTTCCCATTCGTATCAGAGTTCCAGACGCGGTTGCTCTTCAACCAGGCGTTCAGTAGAGGTCTCCAGATTTCCATGATTCTTGCTGGGAAGAAAGACGAATCATCACACTCTTGAAGTTTTTGTTGCTATTGNNTACCACAGTTAAATCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E577695" ref_strand="-" ref_description="SGN-E577695 [LE15BH09]">
      <seq>ctatcaccttgatatagctcacggcagcagaaatttactggtgtatggactttcttggtntgttatgctaaccgctcttctggtcttgaagatggtatcaatgggcagacgaagatttgggactgattttcagctcatgttcagaattctgaaagcacttctattccttggattcgtatctgtcatgactgtgttatttgttgtttgtggcctgaccatgagtgatctatttgctgccattcttgccttcgtaccgacaggctggggcattcttcttattggtcaagcatgcaggccctgttttaagggacttggaatttgggattcagtgatggagttggcacgggcatacgaatgcatcatgggtctgttcatattcgcgccagttgtggtcttgtcttggttcccattcgtatcagagttccagacgcggttgctcttcaaccaggcgttcagtagaggtctccagatttcaatgattcttgctgggaagaaagacgaatcatcacactcttgaagtttttgttgctattgttaaccacagttaaatctaggcattactactgatgaatgcacaaagaaatcttcttattgaatagagttcaaaatcatagatgtgtaaaaacattttgtagcaagttttagatttattacatacttgtacttcattcagatgattaatatttaattcattaatactcgtggttcttgaaacaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="+" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="46221" stop="48668"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46521" g_stop="46560" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="40" r_length="40" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46561" i_stop="46651" i_length="91">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.447" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46652" g_stop="46702" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="91" r_length="51" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46703" i_stop="47073" i_length="371">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="47074" g_stop="47259" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="277" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="47260" i_stop="47927" i_length="668">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="47928" g_stop="48365" g_length="438"/>
          <reference_exon_boundary r_type="cDNA" r_start="278" r_stop="715" r_length="438" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="716" polyA_stop="732"/>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="+" ref_id="SGN-E577695" ref_strand="-">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>715</cumulative_length_of_scored_exons>
        <coverage percentage="0.977" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E577695" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="46521" e_stop="46560"/>
          <exon e_start="46652" e_stop="46702"/>
          <exon e_start="47074" e_stop="47259"/>
          <exon e_start="47928" e_stop="48365"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATCACCTTGATATAGCTCACGGCAGCAGAAATTTACTGGTAAGAACTTACTTGTCATTATATAGTTTTAACTTTTGTCTCTCCTTTTTGAAGAAGAGTCTTACAGTTTCCATTAAATCATCTCATACAGGTGTATGGACTTTCTTGGTTTGTTATGCTAACCGCTCTTCTGGTCTTGAAGGTACTTACTTACCTCTTAGCTTGCTTGACACATTACAACTTAACTAACCCCAATATGTTGGAAGTGGGTGAAGTAATCACATTTACCATCTTACTGTTGATGGGGGTGAATTGTTGTTTAAACAGATTGCATAATTCTATCTTTCCTAGTTATGTCTATCCACTGAATATTTAGGTTCTTTTAATTGCAAAATATCAGCTTCGTCGACAGTCCTCTAGCTTTATAACTTGATCTATCAGAGTAATTCATGCTGCACCTTTCTATATGTTTGAACTGGATACGCGAAACATTATGAAGGAACAATTATACATGCTTATTTTGGACTTGATATGTTTATCTAATCATGCTTCTTGTTATTTTGCTCGCTATAGATGGTATCAATGGGCAGACGAAGATTTGGGACTGATTTTCAGCTCATGTTCAGAATTCTGAAAGCACTTCTATTCCTTGGATTCGTATCTGTCATGACTGTGTTATTTGTTGTTTGTGGCCTGACCATGAGTGATCTATTTGCTGCCATTCTTGCCTTCGTACCGACAGGCTGGGGCATTCTTCTTGTAAGTTCATTTTCTTGTATATCTAAGGATCATCTATTTTTGTTCTGTTTCTTGCTATTTGGTTTGTTATTTGACTCCCCCCCCCCCCCCCCCCCTCTTTTACATTCTTTCAATTTGATTTACTTAGAAAGTTAAACTCTTCTCTTCAATTAGTGATCTAATTCTTGGTAATTTTTGTTTCTACGTATTATCATAGACCATTGTCCTTTAATTTTTCTTACTATATGTTGTTTTTTTCGTACGTCGATTACCTTATTATTTTTTTGTTGTTACTATTTCTTTTTTCAGCATACTTCGCCATGCTGTCTTTATTTTCTTGTCATGGCTTCTTCTTTTCCTATTTCTTTTTCCCAACTGCTTTGAAATGCTTTTCCTTGATCCAAGGGTCTATCGGAAACAACCTCTCTACCTTGGAAGTAGTGTTTATGTCTGTGTAGACTCTATCCTCCCAAGACCCCACACTTTTGGGATCACACCAGGAATGTTGTTGATCTTATTCTTGGTAATATTGCCATAGCAACTTCTGCTGCTGTTTCTCCAATAAGCTACTAGAATGAAATGAATGTTTCCCACTGTTAAGTCATACAACTAATGTACTTGCATGTTAAAATATAGCTTCATCTGATCTTTTACACCTTTGTGATTAATTTCTTCCTTTATGTTCAAAGATTGGTCAAGCATGCAGGCCCTGTTTTAAGGGACTTGGAATTTGGGATTCAGTGATGGAGTTGGCACGGGCATACGAATGCATCATGGGTCTGTTCATATTCGCGCCAGTTGTGGTCTTGTCTTGGTTCCCATTCGTATCAGAGTTCCAGACGCGGTTGCTCTTCAACCAGGCGTTCAGTAGAGGTCTCCAGATTTCAATGATTCTTGCTGGGAAGAAAGACGAATCATCACACTCTTGAAGTTTTTGTTGCTATTGTTAACCACAGTTAAATCTAGGCATTACTACTGATGAATGCACAAAGAAATCTTCTTATTGAATAGAGTTCAAAATCATAGATGTGTAAAAACATTTTGTAGCAAGTTTTAGATTTATTACATACTTGTACTTCATTCAGATGATTAATATTTAATTCATTAATACTCGTGGTTCTTGAAAC</genome_strand>
        <mrna_strand>CTATCACCTTGATATAGCTCACGGCAGCAGAAATTTACTG...........................................................................................GTGTATGGACTTTCTTGGTNTGTTATGCTAACCGCTCTTCTGGTCTTGAAG...................................................................................................................................................................................................................................................................................................................................................................................ATGGTATCAATGGGCAGACGAAGATTTGGGACTGATTTTCAGCTCATGTTCAGAATTCTGAAAGCACTTCTATTCCTTGGATTCGTATCTGTCATGACTGTGTTATTTGTTGTTTGTGGCCTGACCATGAGTGATCTATTTGCTGCCATTCTTGCCTTCGTACCGACAGGCTGGGGCATTCTTCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGTCAAGCATGCAGGCCCTGTTTTAAGGGACTTGGAATTTGGGATTCAGTGATGGAGTTGGCACGGGCATACGAATGCATCATGGGTCTGTTCATATTCGCGCCAGTTGTGGTCTTGTCTTGGTTCCCATTCGTATCAGAGTTCCAGACGCGGTTGCTCTTCAACCAGGCGTTCAGTAGAGGTCTCCAGATTTCAATGATTCTTGCTGGGAAGAAAGACGAATCATCACACTCTTGAAGTTTTTGTTGCTATTGTTAACCACAGTTAAATCTAGGCATTACTACTGATGAATGCACAAAGAAATCTTCTTATTGAATAGAGTTCAAAATCATAGATGTGTAAAAACATTTTGTAGCAAGTTTTAGATTTATTACATACTTGTACTTCATTCAGATGATTAATATTTAATTCATTAATACTCGTGGTTCTTGAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E426413" ref_strand="-" ref_description="SGN-E426413 [STM-46-D23]">
      <seq>cagcagaaatttactggtgtatggactttcttggtttgttatgctaaccgctcttctggtcttaaagatggtatcaatgggcagacgaagatttgggactgattttcagctcatgttcagaattctgaaagcacttctattccttggatttgtatctgtcatgactgtgttatttgttgtttgtggcctgaccttaagtgatctgtttgctgccattcttgcctttgtaccgacaggctggggcattcttcttattggtcaagcatgcaggccctgttttaagggacttggaatttgggattcagtgatggagttggcacgggcatacgaatgcatcatgggactgttcatattcgcgccagttgtggtcttgtcttggttcccattcgtatcagagttccagacgcggttgctcttcaaccaggcgttcagtagaggtctccagatttcaatgattcttgctgggaagaaagacaaatcatcacactcttgaagtttttgttgctattgttaagcaagttaacagtattctttttaaaactaggcattactactgatgaatgcacaaagaaatcttcttattgaatagagttcaaaatcatagggtgtaaaaacattttgtagcaagttttagatttattacatacttgtgtagaaaatacggctacgtacttcattcagatgattaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="+" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="46347" stop="48632"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46545" g_stop="46560" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="16" r_length="16" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46561" i_stop="46651" i_length="91">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.447" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46652" g_stop="46702" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="17" r_stop="67" r_length="51" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46703" i_stop="47073" i_length="371">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="47074" g_stop="47259" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="68" r_stop="253" r_length="186" r_score="0.973"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="47260" i_stop="47927" i_length="668">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="47928" g_stop="48310" g_length="383"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="649" r_length="396" r_score="0.911"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="+" ref_id="SGN-E426413" ref_strand="-">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>636</cumulative_length_of_scored_exons>
        <coverage percentage="0.922" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E426413" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="46545" e_stop="46560"/>
          <exon e_start="46652" e_stop="46702"/>
          <exon e_start="47074" e_stop="47259"/>
          <exon e_start="47928" e_stop="48310"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGCAGAAATTTACTGGTAAGAACTTACTTGTCATTATATAGTTTTAACTTTTGTCTCTCCTTTTTGAAGAAGAGTCTTACAGTTTCCATTAAATCATCTCATACAGGTGTATGGACTTTCTTGGTTTGTTATGCTAACCGCTCTTCTGGTCTTGAAGGTACTTACTTACCTCTTAGCTTGCTTGACACATTACAACTTAACTAACCCCAATATGTTGGAAGTGGGTGAAGTAATCACATTTACCATCTTACTGTTGATGGGGGTGAATTGTTGTTTAAACAGATTGCATAATTCTATCTTTCCTAGTTATGTCTATCCACTGAATATTTAGGTTCTTTTAATTGCAAAATATCAGCTTCGTCGACAGTCCTCTAGCTTTATAACTTGATCTATCAGAGTAATTCATGCTGCACCTTTCTATATGTTTGAACTGGATACGCGAAACATTATGAAGGAACAATTATACATGCTTATTTTGGACTTGATATGTTTATCTAATCATGCTTCTTGTTATTTTGCTCGCTATAGATGGTATCAATGGGCAGACGAAGATTTGGGACTGATTTTCAGCTCATGTTCAGAATTCTGAAAGCACTTCTATTCCTTGGATTCGTATCTGTCATGACTGTGTTATTTGTTGTTTGTGGCCTGACCATGAGTGATCTATTTGCTGCCATTCTTGCCTTCGTACCGACAGGCTGGGGCATTCTTCTTGTAAGTTCATTTTCTTGTATATCTAAGGATCATCTATTTTTGTTCTGTTTCTTGCTATTTGGTTTGTTATTTGACTCCCCCCCCCCCCCCCCCCCTCTTTTACATTCTTTCAATTTGATTTACTTAGAAAGTTAAACTCTTCTCTTCAATTAGTGATCTAATTCTTGGTAATTTTTGTTTCTACGTATTATCATAGACCATTGTCCTTTAATTTTTCTTACTATATGTTGTTTTTTTCGTACGTCGATTACCTTATTATTTTTTTGTTGTTACTATTTCTTTTTTCAGCATACTTCGCCATGCTGTCTTTATTTTCTTGTCATGGCTTCTTCTTTTCCTATTTCTTTTTCCCAACTGCTTTGAAATGCTTTTCCTTGATCCAAGGGTCTATCGGAAACAACCTCTCTACCTTGGAAGTAGTGTTTATGTCTGTGTAGACTCTATCCTCCCAAGACCCCACACTTTTGGGATCACACCAGGAATGTTGTTGATCTTATTCTTGGTAATATTGCCATAGCAACTTCTGCTGCTGTTTCTCCAATAAGCTACTAGAATGAAATGAATGTTTCCCACTGTTAAGTCATACAACTAATGTACTTGCATGTTAAAATATAGCTTCATCTGATCTTTTACACCTTTGTGATTAATTTCTTCCTTTATGTTCAAAGATTGGTCAAGCATGCAGGCCCTGTTTTAAGGGACTTGGAATTTGGGATTCAGTGATGGAGTTGGCACGGGCATACGAATGCATCATGGGTCTGTTCATATTCGCGCCAGTTGTGGTCTTGTCTTGGTTCCCATTCGTATCAGAGTTCCAGACGCGGTTGCTCTTCAACCAGGCGTTCAGTAGAGGTCTCCAGATTTCAATGATTCTTGCTGGGAAGAAAGACGAATCATCACACTCTTGAAGTTTTTGTTGCTATTGTTAA-C-----CACAG--------TTAAATCTAGGCATTACTACTGATGAATGCACAAAGAAATCTTCTTATTGAATAGAGTTCAAAATCATAGATGTGTAAAAACATTTTGTAGCAAGTTTTAGATTTATTACATACTT</genome_strand>
        <mrna_strand>CAGCAGAAATTTACTG...........................................................................................GTGTATGGACTTTCTTGGTTTGTTATGCTAACCGCTCTTCTGGTCTTAAAG...................................................................................................................................................................................................................................................................................................................................................................................ATGGTATCAATGGGCAGACGAAGATTTGGGACTGATTTTCAGCTCATGTTCAGAATTCTGAAAGCACTTCTATTCCTTGGATTTGTATCTGTCATGACTGTGTTATTTGTTGTTTGTGGCCTGACCTTAAGTGATCTGTTTGCTGCCATTCTTGCCTTTGTACCGACAGGCTGGGGCATTCTTCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGTCAAGCATGCAGGCCCTGTTTTAAGGGACTTGGAATTTGGGATTCAGTGATGGAGTTGGCACGGGCATACGAATGCATCATGGGACTGTTCATATTCGCGCCAGTTGTGGTCTTGTCTTGGTTCCCATTCGTATCAGAGTTCCAGACGCGGTTGCTCTTCAACCAGGCGTTCAGTAGAGGTCTCCAGATTTCAATGATTCTTGCTGGGAAGAAAGACAAATCATCACACTCTTGAAGTTTTTGTTGCTATTGTTAAGCAAGTTAACAGTATTCTTTTTAAAACTAGGCATTACTACTGATGAATGCACAAAGAAATCTTCTTATTGAATAGAGTTCAAAATCATAG-GGTGTAAAAACATTTTGTAGCAAGTTTTAGATTTATTACATACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E352834" ref_strand="+" ref_description="SGN-E352834 [cTOS-11-E4]">
      <seq>tggtcttgtcttggttcccattcgtatcagagttccagacgcggttgctcttcaaccaggcgttcagtagaggtctccagatttcaatgattcttgctgggaagaaagacgaatcatcacactcttgaagtttttgttgctattgttaaccacagttaaatctaggcattactactgatgaatgcacaaagaaatcttcttattgaatagagttcaaaatcatagatgtgtaaaaacattttgtagcaagttttagatttattacatacttgtacttcattcagatgattaatatttaattcattaatactcgtgggntcttgaacatatcatcaggcttcgtatttttgtttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="+" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="47740" stop="48694"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48040" g_stop="48395" g_length="356"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="356" r_length="356" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="+" ref_id="SGN-E352834" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>356</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E352834" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48040" e_stop="48395"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTCTTGTCTTGGTTCCCATTCGTATCAGAGTTCCAGACGCGGTTGCTCTTCAACCAGGCGTTCAGTAGAGGTCTCCAGATTTCAATGATTCTTGCTGGGAAGAAAGACGAATCATCACACTCTTGAAGTTTTTGTTGCTATTGTTAACCACAGTTAAATCTAGGCATTACTACTGATGAATGCACAAAGAAATCTTCTTATTGAATAGAGTTCAAAATCATAGATGTGTAAAAACATTTTGTAGCAAGTTTTAGATTTATTACATACTTGTACTTCATTCAGATGATTAATATTTAATTCATTAATACTCGT-GGTTCTTGAAACATATCATCAGGCTTCGTATTTTTGTTTTTG</genome_strand>
        <mrna_strand>TGGTCTTGTCTTGGTTCCCATTCGTATCAGAGTTCCAGACGCGGTTGCTCTTCAACCAGGCGTTCAGTAGAGGTCTCCAGATTTCAATGATTCTTGCTGGGAAGAAAGACGAATCATCACACTCTTGAAGTTTTTGTTGCTATTGTTAACCACAGTTAAATCTAGGCATTACTACTGATGAATGCACAAAGAAATCTTCTTATTGAATAGAGTTCAAAATCATAGATGTGTAAAAACATTTTGTAGCAAGTTTTAGATTTATTACATACTTGTACTTCATTCAGATGATTAATATTTAATTCATTAATACTCGTGGGNTCTTG-AACATATCATCAGGCTTCGTATTTTTGTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E375998" ref_strand="-" ref_description="SGN-E375998 [TUS-40-M22]">
      <seq>gcaacaattatgtcagtaataaactttgagaattttttcgacaatactcaccagagacttggcttagctctatatgttgccatatggctgccattcatcgctgggatttttcgacctgacaggggaagcaaaaataggggtgtatggtatgcatttcactggcttattggagtcacagttactttactgggaatcgtcaacctatatataggtttacaagcatataacacgaaaacaatgaaaaacacaagtgtttggaactggcttttcagtattgaggttggtgttatcgcgttcatctatctgttccaagaaaaatggcaatatataaagcaatcaggagggattttaagcaatgaatcagtacgaccaacggatcaagaagcatctccaactcagaaaaaagaaatatcacccatggcataatcagagtcatgttaagacttcagacaaacaaataattttgcctttaactaacataaatttttttcttttttttacagctaacattagattctttccaattttattacaatttccccaaacagaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="-" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="58726" stop="22824"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58426" g_stop="58305" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58304" i_stop="58219" i_length="86">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58218" g_stop="57790" g_length="429"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="551" r_length="429" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="57789" i_stop="56425" i_length="1365">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.963" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="56424" g_stop="56404" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="552" r_stop="572" r_length="21" r_score="0.667"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="-" ref_id="SGN-E375998" ref_strand="-">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>572</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E375998" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="58426" e_stop="58305"/>
          <exon e_start="58218" e_stop="57790"/>
          <exon e_start="56424" e_stop="56404"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAACAATTATGTCAGTAATAAACTTTGAGAATTTTTTCGACAATACTCACCAGAGACTTGGCTTAGCTCTATATGTTGCCATATGGCTGCCATTCATCGCTGGGATTTTTCGACCTGACAGGTAAAAGATACATAAATATCACAATGGAAGAAGTTAATGTTGTTCACTCAATTGAATAGAAGCTTTTGTTGTTTCTATATATACAGGGGAAGCAAAAATAGGGGTGTATGGTATGCATTTCACTGGCTTATTGGAGTCACAGTTACTTTACTGGGAATCGTCAACCTATATATAGGTTTACAAGCATATAACACGAAAACAATGAAAAACACAAGTGTTTGGAACTGGCTTTTCAGTATTGAGGTTGGTGTTATCGCGTTCATCTATCTGTTCCAAGAAAAATGGCAATATATAAAGCAATCAGGAGGGATTTTAAGCAATGAATCAGTACGACCAACGGATCAAGAAGCATCTCCAACTCAGAAAAAAGAAATATCACCCATGGCATAATCAGAGTCATGTTAAGACTTCAGACAAACAAATAATTTTGCCTTTAACTAACATAAATTTTCTTCTTTTTTTTACAGCTAACATTAGATTCTTTCCAATTTTATTACAATTTCACAAAACAGATATTTAAGAGTTTTGTGTAGTACTATCAGTGTAGAGCATCATACGAAGTCTATTAAACGAAAGATATTGTGTCCACCTCTCCTCATTCACAATCACGACAGGTTCAATCAATGAGTAAACCATATCCAACACCATCGCGACATAGGCAGCTTGTCATTCTATCTTTTCCCTGTTCACCGAGAATGGAAATGGAAAACTCAAGCAAGAGAAACGTGATCTCAGTGGATCAACTTTTTCCTAAGAATACCAACTAATCTAAAACTCAAAATGATCATTGATCTCGATAGTTACAAGGACATCTGACAAACTTGTAAAGTTTCACTATATTAGAAATAGAAACAGTGTATATTTATACAAGTCAAGGAAATAACTGCACGTAACCTGTCGCTAGTGCAATTCCTAAAATGACAAGGGGTGGAAGGATGACAAATGCTCCAATTGTAGCAAAGAAAGTTGAGTCATTCCTCCGAGATACTTCATTCAGGTAGGCTTGTCTTTTGATGTTTCTCTTTTGTGAGGTAGTTAAGAACTTGGCGCTAAACTTCTTCAGATTCTTACCCAAAGGAATGCTGAAATCATCATCTCGACTTCCAACCAAGTTAGCAAGCTGATCACGAATTGTAGGTTTACCAGAGGTACTATCACTTTCATAACCTGATCAATGATCAAGTGAATGACAGTCAGAAAGAACTATAGGTTAGTTCAGCTCTCACTAATGAAAGCCGAAAGAAACAAAGTTGGCAAGTTTATTTGAAATCTTGCTGTAAATCTTTTTAACAAAGCGAACAGTAGGGATAATGAATGGATATGGAATATGATGCCATGCTAAAGCAACATGTTTACAGATTCTACATGAAGCTGCTTCACACAAGATAACCTGCAGTAAAGAACACTGCGGAAAGTGCAACAGATGCTCTATGTATACGGAGGAACTTGAATCCCCAAATCACTTGCTGCTACATAGTAAATATATTTGGGAAGTATAGAGCATGTTCGTTAACACATTGGGAGTACAATCGTTAACGCAAAGGTTAGGTCTAGAGAGTATAAAGCCACCTCAGAATGGCCTGGAGCGCAATTCCTACTAACTATATATTTTGTGCAGTTTCAAGGGAAAGGAACCCCAAATGCTTTCGAGATCATAGTCTAGATGTTTTTACTCAAAATCTAGATGTACACAAATGTTAAGATTCAGTATAAGTTGACTTCCATAGATGATGAAAACTCTTTTTGTGGACTTCATAGATTTCCTATAATGCTAGGAAGGAGCTCAAAGGGGAGAAGAGAACACATACCATTTGCTATATATATATATATATATACACTTTGTTAGAGCAGTTTAATGATAGTCTCGTATTACTTATCAGGAAAACAGAAGAGAATCAAAA</genome_strand>
        <mrna_strand>GCAACAATTATGTCAGTAATAAACTTTGAGAATTTTTTCGACAATACTCACCAGAGACTTGGCTTAGCTCTATATGTTGCCATATGGCTGCCATTCATCGCTGGGATTTTTCGACCTGACAG......................................................................................GGGAAGCAAAAATAGGGGTGTATGGTATGCATTTCACTGGCTTATTGGAGTCACAGTTACTTTACTGGGAATCGTCAACCTATATATAGGTTTACAAGCATATAACACGAAAACAATGAAAAACACAAGTGTTTGGAACTGGCTTTTCAGTATTGAGGTTGGTGTTATCGCGTTCATCTATCTGTTCCAAGAAAAATGGCAATATATAAAGCAATCAGGAGGGATTTTAAGCAATGAATCAGTACGACCAACGGATCAAGAAGCATCTCCAACTCAGAAAAAAGAAATATCACCCATGGCATAATCAGAGTCATGTTAAGACTTCAGACAAACAAATAATTTTGCCTTTAACTAACATAAATTTTTTTCTTTTTTTTACAGCTAACATTAGATTCTTTCCAATTTTATTACAATTTCCCCAAACAGAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E375999" ref_strand="+" ref_description="SGN-E375999 [TUS-40-M22]">
      <seq>taaagttagcatttcactttggcttttttgcagaatcgatgatgattaaggcttcttagaaaggaaatatttatttttcgttgttcaattggtcattgcagttaaacagaaaaacataatgtacctgaagagcttaacaagttaagttcaagaagttttttgctggtgttgtctctcttttccagctctgttccttcaaaacagagtttttaagcattagccatataggattgagtagtagcaacatgatacagaaggtgattcttcatgtcgcgattttcattgttgttcttctgccagtagctacagcaactcagttgcacacgaaaaagactattcacgaatgcagtgaccacaaagtccttgagccaagtccaaagttgtcatttcaaattgttctacatggaattctcctctggacttccatggggttcttgatgcctatcgcgattcttgtaataagaatgtcgaataaagagcaaaatggaagaaggctaaagatgattgtgtacactcatgcttttttacagatactatctgttctcctcgtagcagtagcaacaattatgtcagtaataaactttgagaattttttcgacaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="-" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="60020" stop="58083"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59720" g_stop="59353" g_length="368"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="368" r_length="368" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59352" i_stop="59241" i_length="112">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.672" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59240" g_stop="59079" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="369" r_stop="530" r_length="162" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="59078" i_stop="58454" i_length="625">
            <donor d_prob="0.916" d_score="1.00"/>
            <acceptor a_prob="0.923" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="58453" g_stop="58383" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="531" r_stop="601" r_length="71" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="-" ref_id="SGN-E375999" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>601</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E375999" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59720" e_stop="59353"/>
          <exon e_start="59240" e_stop="59079"/>
          <exon e_start="58453" e_stop="58383"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAGTTAGCATTTCACTTTGGCTTTTTTGCAGAATCGATGATGATTAAGGCTTCTTAGAAAGGAAATATTTATTTTTCGTTGTTCAATTGGTCATTGCAGTTAAACAGAAAAACATAATGTACCTGAAGAGCTTAACAAGTTAAGTTCAAGAAGTTTTTTGCTGGTGTTGTCTCTCTTTTCCAGCTCTGTTCCTTCAAAACAGAGTTTTTAAGCATTAGCCATATAGGATTGAGTAGTAGCAACATGATACAGAAGGTGATTCTTCATGTCGCGATTTTCATTGTTGTTCTTCTGCCAGTAGCTACAGCAACTCAGTTGCACACGAAAAAGACTATTCACGAATGCAGTGACCACAAAGTCCTTGAGGTTATTCACATTTGCATCTCATACTAGTACATAAACGTAAACGAGTGCTTGTGATCTAGTCATATATATGTTTTAAGGCAGCAACTGATTTTTTTCTAATATCAATTTTCAGCCAAGTCCAAAGTTGTCATTTCAAATTGTTCTACATGGAATTCTCCTCTGGACTTCCATGGGGTTCTTGATGCCTATCGCGATTCTTGTAATAAGAATGTCGAATAAAGAGCAAAATGGAAGAAGGCTAAAGATGATTGTGTACACTCATGCTTTTTTACAGGTAAATAAACTCACTTTTTCATTGTGAATGAGGGAAGGGAAAAGATAACAATCACTCAGTATTCAGTGTTTGCGCCAAACCAATGAATAAAAGATTTCTATTATTTTTCATATCTTTAAAGTCAATGAATGGTATAGTTCATTTCATTGACATGAAAATCAGTATCTCAACAGTTACTAAACTTTTATTATTACAAATTTGAACTTTGTTTATTAGATTAAAATACCCCACCTTTCACCTCTAATGATATTGAAAGAGAGTAAGAGTTATCATGATTACAAATTTGCTAAATCATTAAACTAGCTAGCCCACAATTAATTATTAGGTAATTTTAAGTTAAAGTTCATTTATCCCTCACTGATGAATGCTTAGTGATAAAGGAAATGTAGGAGTTGTAAAGTCTGTTATTTGAGTACTACAACTAACTCTATCTTTATTAAGAAATGAGTTCAATTAAAGTTAATTATGAATGTTAGGTATAACCGTTTAATTTTTATCATGACATACTTTTGATACATTACATTTACATCATTATGTAGTGCATAACACGACGATAATACCATAAAAGATATACTCGCTGACAAAAGAGAGCGAGACTGAAAATTTGTATTTGGTTATTTTTCAGATACTATCTGTTCTCCTCGTAGCAGTAGCAACAATTATGTCAGTAATAAACTTTGAGAATTTTTTCGACAA</genome_strand>
        <mrna_strand>TAAAGTTAGCATTTCACTTTGGCTTTTTTGCAGAATCGATGATGATTAAGGCTTCTTAGAAAGGAAATATTTATTTTTCGTTGTTCAATTGGTCATTGCAGTTAAACAGAAAAACATAATGTACCTGAAGAGCTTAACAAGTTAAGTTCAAGAAGTTTTTTGCTGGTGTTGTCTCTCTTTTCCAGCTCTGTTCCTTCAAAACAGAGTTTTTAAGCATTAGCCATATAGGATTGAGTAGTAGCAACATGATACAGAAGGTGATTCTTCATGTCGCGATTTTCATTGTTGTTCTTCTGCCAGTAGCTACAGCAACTCAGTTGCACACGAAAAAGACTATTCACGAATGCAGTGACCACAAAGTCCTTGAG................................................................................................................CCAAGTCCAAAGTTGTCATTTCAAATTGTTCTACATGGAATTCTCCTCTGGACTTCCATGGGGTTCTTGATGCCTATCGCGATTCTTGTAATAAGAATGTCGAATAAAGAGCAAAATGGAAGAAGGCTAAAGATGATTGTGTACACTCATGCTTTTTTACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTATCTGTTCTCCTCGTAGCAGTAGCAACAATTATGTCAGTAATAAACTTTGAGAATTTTTTCGACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E324396" ref_strand="+" ref_description="SGN-E324396 [cTOC-6-F22]">
      <seq>taaagttagcatttcactttggctttttggcanaatgtatgattattaaggcttcttagaaaggaaatatttatttttcgttgttcaattggtcattgcagttaaacagaaaaacataatgtacctgaagagcttaacaagttaagttcaagaagttttttgctggtgttgtctctcttttccagctctgttccttcaaaacagagtttttaagcattagccatataggattgagtagtagcaacatgatacagaaggtgattcttcatgtcgcgattttcattgttgttcttctgccagtagctacagcaactcagttgcacacgaaaaagactattcacgaatgcagtgaccacaaagtccttgagccaagtccaaagttgtcatttcaaattgttctacatggaattctcctctggacttccatggggttcttgatgcctatcccgattcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="-" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="60020" stop="58853"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59720" g_stop="59353" g_length="368"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="368" r_length="368" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59352" i_stop="59241" i_length="112">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.672" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59240" g_stop="59153" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="369" r_stop="456" r_length="88" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="-" ref_id="SGN-E324396" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>456</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E324396" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59720" e_stop="59353"/>
          <exon e_start="59240" e_stop="59153"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAGTTAGCATTTCACTTTGGCTTTTTTGCAGAATCGATGATGATTAAGGCTTCTTAGAAAGGAAATATTTATTTTTCGTTGTTCAATTGGTCATTGCAGTTAAACAGAAAAACATAATGTACCTGAAGAGCTTAACAAGTTAAGTTCAAGAAGTTTTTTGCTGGTGTTGTCTCTCTTTTCCAGCTCTGTTCCTTCAAAACAGAGTTTTTAAGCATTAGCCATATAGGATTGAGTAGTAGCAACATGATACAGAAGGTGATTCTTCATGTCGCGATTTTCATTGTTGTTCTTCTGCCAGTAGCTACAGCAACTCAGTTGCACACGAAAAAGACTATTCACGAATGCAGTGACCACAAAGTCCTTGAGGTTATTCACATTTGCATCTCATACTAGTACATAAACGTAAACGAGTGCTTGTGATCTAGTCATATATATGTTTTAAGGCAGCAACTGATTTTTTTCTAATATCAATTTTCAGCCAAGTCCAAAGTTGTCATTTCAAATTGTTCTACATGGAATTCTCCTCTGGACTTCCATGGGGTTCTTGATGCCTATCGCGATTCTTG</genome_strand>
        <mrna_strand>TAAAGTTAGCATTTCACTTTGGCTTTTTGGCANAATGTATGATTATTAAGGCTTCTTAGAAAGGAAATATTTATTTTTCGTTGTTCAATTGGTCATTGCAGTTAAACAGAAAAACATAATGTACCTGAAGAGCTTAACAAGTTAAGTTCAAGAAGTTTTTTGCTGGTGTTGTCTCTCTTTTCCAGCTCTGTTCCTTCAAAACAGAGTTTTTAAGCATTAGCCATATAGGATTGAGTAGTAGCAACATGATACAGAAGGTGATTCTTCATGTCGCGATTTTCATTGTTGTTCTTCTGCCAGTAGCTACAGCAACTCAGTTGCACACGAAAAAGACTATTCACGAATGCAGTGACCACAAAGTCCTTGAG................................................................................................................CCAAGTCCAAAGTTGTCATTTCAAATTGTTCTACATGGAATTCTCCTCTGGACTTCCATGGGGTTCTTGATGCCTATCCCGATTCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E323708" ref_strand="+" ref_description="SGN-E323708 [cTOC-2-P23]">
      <seq>ttagcatttcactttggctttttttgcagaatcgatgatgattaaagcttcttagaaaggaaatatttatttttcgttgttcaattggtcattgcagttaaacagaaaaacataatgtacctgaagagcttaacaagttaagttcaagaagttttttgctggtgttgtctctcttttccagctctgttccttcaaaacagagtttttaagcattacccatataggattgagtagtagcaacatgatacagaaggtgattcttcatgtcgcgattttcattgttgttcttctgccaggagctacagcaactcagttgcacacgaaaaagactatttacgaatgcagtgaccacaaagtccttgagccaagtccaaagttgtcatttcaaattgttctacatggaattctcctgtggacttccatggggctcttgatgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="-" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="60015" stop="58867"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59715" g_stop="59353" g_length="363"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="364" r_length="364" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59352" i_stop="59241" i_length="112">
            <donor d_prob="0.979" d_score="0.98"/>
            <acceptor a_prob="0.672" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59240" g_stop="59167" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="365" r_stop="438" r_length="74" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="-" ref_id="SGN-E323708" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>437</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E323708" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59715" e_stop="59353"/>
          <exon e_start="59240" e_stop="59167"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGCATTTCACTTTGGC-TTTTTTGCAGAATCGATGATGATTAAGGCTTCTTAGAAAGGAAATATTTATTTTTCGTTGTTCAATTGGTCATTGCAGTTAAACAGAAAAACATAATGTACCTGAAGAGCTTAACAAGTTAAGTTCAAGAAGTTTTTTGCTGGTGTTGTCTCTCTTTTCCAGCTCTGTTCCTTCAAAACAGAGTTTTTAAGCATTAGCCATATAGGATTGAGTAGTAGCAACATGATACAGAAGGTGATTCTTCATGTCGCGATTTTCATTGTTGTTCTTCTGCCAGTAGCTACAGCAACTCAGTTGCACACGAAAAAGACTATTCACGAATGCAGTGACCACAAAGTCCTTGAGGTTATTCACATTTGCATCTCATACTAGTACATAAACGTAAACGAGTGCTTGTGATCTAGTCATATATATGTTTTAAGGCAGCAACTGATTTTTTTCTAATATCAATTTTCAGCCAAGTCCAAAGTTGTCATTTCAAATTGTTCTACATGGAATTCTCCTCTGGACTTCCATGGGGTTCTTGATGCC</genome_strand>
        <mrna_strand>TTAGCATTTCACTTTGGCTTTTTTTGCAGAATCGATGATGATTAAAGCTTCTTAGAAAGGAAATATTTATTTTTCGTTGTTCAATTGGTCATTGCAGTTAAACAGAAAAACATAATGTACCTGAAGAGCTTAACAAGTTAAGTTCAAGAAGTTTTTTGCTGGTGTTGTCTCTCTTTTCCAGCTCTGTTCCTTCAAAACAGAGTTTTTAAGCATTACCCATATAGGATTGAGTAGTAGCAACATGATACAGAAGGTGATTCTTCATGTCGCGATTTTCATTGTTGTTCTTCTGCCAGGAGCTACAGCAACTCAGTTGCACACGAAAAAGACTATTTACGAATGCAGTGACCACAAAGTCCTTGAG................................................................................................................CCAAGTCCAAAGTTGTCATTTCAAATTGTTCTACATGGAATTCTCCTGTGGACTTCCATGGGGCTCTTGATGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E737543" ref_strand="+" ref_description="SGN-E737543 [LC10BB03]">
      <seq>tgcaggaattcggcacgaggctttgatcggaaattaaactcaacctacaaatcctccgatggcggcagtcactgtggccgcagaatggcagctcctttacaatcgctactaccggaaacctgaaatttacctgatgcaatggaagcacgtcgacctcacgcgtaacaaagtcgcctgcgctcctttcggtggtccaatcgctgtcatacgtgacgatgctaagatcgtccagctttacgctgaatctgcccttcgtaagcttagaattttcaattccgctggtgttcagatctctgaaacagtatggaagaatcctggcggtcgacttatcggtatgtcatggactgatgatcaaattctagtttgtattactcaggatggtactgtttatcgttataacatacatgccgagcctattgaaccgaattctcagcttacgttaggtgcggactgttttactcatagtgtagttgagtgtgttttctgggggaatggtgttgtttgtatcaatgaggcgtttcaggtttattgtatacctgatttcaataatccaaaacctgtcaaattggcggatactggtttggaggattttcctttatgtatggctgtgattgaaccgcagtatactatgtctggcaatgtggaggtactgatgggggttgctgatcatgtgctgttggtggaagaggatggcgttcaggaggttggacttggaattgggcctctacagaaaatggtggtttcccggaatgggaagcttttggcatctttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="+" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="63543" stop="64894"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63843" g_stop="64594" g_length="752"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="772" r_length="752" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="+" ref_id="SGN-E737543" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>752</cumulative_length_of_scored_exons>
        <coverage percentage="0.974" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E737543" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63843" e_stop="64594"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGATCGGAAATTAAACTCAACCTACAAATCCTCCGATGGCGGCAGTCACTGTGGCCGCAGAATGGCAGCTCCTTTACAATCGCTACTACCGGAAACCTGAAATTTACCTGATGCAATGGAAGCACGTCGACCTCACGCGTAACAAAGTCGCCTGCGCTCCTTTCGGTGGTCCAATCGCTGTCATACGTGACGATGCTAAGATCGTCCAGCTTTACGCTGAATCTGCCCTTCGTAAGCTTAGAATTTTCAATTCCGCTGGTGTTCAGATCTCTGAAACAGTATGGAAGAATCCTGGCGGTCGACTTATCGGTATGTCATGGACTGATGATCAAATTCTAGTTTGTATTACTCAGGATGGTACTGTTTATCGTTATAACATACATGCCGAGCCTATTGAACCGAATTCTCAGCTTACGTTAGGTGCGGACTGTTTTACTCATAGTGTAGTTGAGTGTGTTTTCTGGGGGAATGGTGTTGTTTGTATCAATGAGGCGTTTCAGGTTTATTGTATACCTGATTTCAATAATCCAAAACCTGTCAAATTGGCGGATACTGGTTTGGAGGATTTTCCTTTATGTATGGCTGTGATTGAACCGCAGTATACTATGTCTGGCAATGTGGAGGTACTGATGGGGGTTGCTGATCATGTGCTGTTGGTGGAAGAGGATGGCGTTCAGGAGGTTGGACTTGGAATTGGGCCTCTACAGAAAATGGTGGTTTCCCGGAATGGGAAGCTTTTGGCATCTTTT</genome_strand>
        <mrna_strand>CTTTGATCGGAAATTAAACTCAACCTACAAATCCTCCGATGGCGGCAGTCACTGTGGCCGCAGAATGGCAGCTCCTTTACAATCGCTACTACCGGAAACCTGAAATTTACCTGATGCAATGGAAGCACGTCGACCTCACGCGTAACAAAGTCGCCTGCGCTCCTTTCGGTGGTCCAATCGCTGTCATACGTGACGATGCTAAGATCGTCCAGCTTTACGCTGAATCTGCCCTTCGTAAGCTTAGAATTTTCAATTCCGCTGGTGTTCAGATCTCTGAAACAGTATGGAAGAATCCTGGCGGTCGACTTATCGGTATGTCATGGACTGATGATCAAATTCTAGTTTGTATTACTCAGGATGGTACTGTTTATCGTTATAACATACATGCCGAGCCTATTGAACCGAATTCTCAGCTTACGTTAGGTGCGGACTGTTTTACTCATAGTGTAGTTGAGTGTGTTTTCTGGGGGAATGGTGTTGTTTGTATCAATGAGGCGTTTCAGGTTTATTGTATACCTGATTTCAATAATCCAAAACCTGTCAAATTGGCGGATACTGGTTTGGAGGATTTTCCTTTATGTATGGCTGTGATTGAACCGCAGTATACTATGTCTGGCAATGTGGAGGTACTGATGGGGGTTGCTGATCATGTGCTGTTGGTGGAAGAGGATGGCGTTCAGGAGGTTGGACTTGGAATTGGGCCTCTACAGAAAATGGTGGTTTCCCGGAATGGGAAGCTTTTGGCATCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E579370" ref_strand="+" ref_description="SGN-E579370 [87353]">
      <seq>tttgatcggaagttaactcaacctccaattcctcccatggcggcagtgactgtggccgcagaatggcagctcctctacaatcgctactaccggaaacctgaaatttaccagatgcaatggaagcacgtcgacctcacgcgcaacaaagtcgcctgcgctcctttcggtggtccaatcgccgtcatccgtgacgatgctaagatcgtccagctctacgccgaatctgcccttcgtaagctcagaattttcaattccgctggtgttcagatctccgaaacagtctggaagaatcccgggggtcgccttatcggtatgtcatggactgacgatcaaattctagtttgtatcactcaggatggtactgtttatcgttataacatccatgccgagcctattgaaccgaattctcagcttacgttaggcgcagattgttttactcatagtgtagttgagtgtgttttctggggaaatggtgttgtttgtatcaatgaggcgtttcaggtttactgtatacctgattttaataatccaaaacctgtcaaattggcggatactggcttggaggattttcctttatgtattgctgtgattgaaccacagtatactatgtctggtaatgtggaggtactgatgggtgttgctgatcatgtgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="+" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="63544" stop="64797"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63844" g_stop="64497" g_length="654"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="653" r_length="653" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="+" ref_id="SGN-E579370" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>654</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E579370" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63844" e_stop="64497"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGATCGGAAATTAAACTCAACCTACAAATCCTCCGATGGCGGCAGTCACTGTGGCCGCAGAATGGCAGCTCCTTTACAATCGCTACTACCGGAAACCTGAAATTTACCTGATGCAATGGAAGCACGTCGACCTCACGCGTAACAAAGTCGCCTGCGCTCCTTTCGGTGGTCCAATCGCTGTCATACGTGACGATGCTAAGATCGTCCAGCTTTACGCTGAATCTGCCCTTCGTAAGCTTAGAATTTTCAATTCCGCTGGTGTTCAGATCTCTGAAACAGTATGGAAGAATCCTGGCGGTCGACTTATCGGTATGTCATGGACTGATGATCAAATTCTAGTTTGTATTACTCAGGATGGTACTGTTTATCGTTATAACATACATGCCGAGCCTATTGAACCGAATTCTCAGCTTACGTTAGGTGCGGACTGTTTTACTCATAGTGTAGTTGAGTGTGTTTTCTGGGGGAATGGTGTTGTTTGTATCAATGAGGCGTTTCAGGTTTATTGTATACCTGATTTCAATAATCCAAAACCTGTCAAATTGGCGGATACTGGTTTGGAGGATTTTCCTTTATGTATGGCTGTGATTGAACCGCAGTATACTATGTCTGGCAATGTGGAGGTACTGATGGGGGTTGCTGATCATGTGCT</genome_strand>
        <mrna_strand>TTTGATCGGAAGTT-AACTCAACCTCCAATTCCTCCCATGGCGGCAGTGACTGTGGCCGCAGAATGGCAGCTCCTCTACAATCGCTACTACCGGAAACCTGAAATTTACCAGATGCAATGGAAGCACGTCGACCTCACGCGCAACAAAGTCGCCTGCGCTCCTTTCGGTGGTCCAATCGCCGTCATCCGTGACGATGCTAAGATCGTCCAGCTCTACGCCGAATCTGCCCTTCGTAAGCTCAGAATTTTCAATTCCGCTGGTGTTCAGATCTCCGAAACAGTCTGGAAGAATCCCGGGGGTCGCCTTATCGGTATGTCATGGACTGACGATCAAATTCTAGTTTGTATCACTCAGGATGGTACTGTTTATCGTTATAACATCCATGCCGAGCCTATTGAACCGAATTCTCAGCTTACGTTAGGCGCAGATTGTTTTACTCATAGTGTAGTTGAGTGTGTTTTCTGGGGAAATGGTGTTGTTTGTATCAATGAGGCGTTTCAGGTTTACTGTATACCTGATTTTAATAATCCAAAACCTGTCAAATTGGCGGATACTGGCTTGGAGGATTTTCCTTTATGTATTGCTGTGATTGAACCACAGTATACTATGTCTGGTAATGTGGAGGTACTGATGGGTGTTGCTGATCATGTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E301700" ref_strand="+" ref_description="SGN-E301700 [cLEW-23-N8]">
      <seq>gaagcttttggcatcttttacacatgatggaaggcttcttgttatgtccacggacttctccagtgtcattttcgagtatccttgtgagtcaaccttaccccctgagcagctagcttggtgtggaatggacagtgtactactttactgggatgatatgcttctgatggtgggtccttatggagaccctgtacgctacttttatgatgaaccagttctccttatccctgaatgtgatggcgttagaatactctccaatatgagtatggaatttcttcatcgagttccagattcaactgtctccatatttcagattggtagcacactacctgcagctttgctttatgatgccttagatcattttgacaggcggagtgccaaggctgatgagaatctgagactaatacggtcttcgctgcccgaggcggttgaagcatgtattgatgcagcaggtcatgaatttgacgtctcacagcagcggacgcttttaagagcagcaagctacggccaagccttttgcagccattttcaacgggaccgcattcaagagatgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="+" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="64276" stop="68224"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64576" g_stop="64663" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="88" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64664" i_stop="64972" i_length="309">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.913" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64973" g_stop="65263" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="379" r_length="291" r_score="0.997"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65264" i_stop="65584" i_length="321">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65585" g_stop="65724" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="380" r_stop="519" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="65725" i_stop="67891" i_length="2167">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.885" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67892" g_stop="67924" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="520" r_stop="552" r_length="33" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="+" ref_id="SGN-E301700" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E301700" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64576" e_stop="64663"/>
          <exon e_start="64973" e_stop="65263"/>
          <exon e_start="65585" e_stop="65724"/>
          <exon e_start="67892" e_stop="67924"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGCTTTTGGCATCTTTTACACATGATGGAAGGCTTCTTGTTATGTCCACGGACTTCTCCAGTGTCATTTTCGAGTATCCTTGTGAGGTGGTTTTTTCATTCCAATACTCTAACTTACTGTTTTACATTATTCTAAGTAAATTCTTCTTGCTCTGTATTTTGTAAGTGCTAACCAGAGTGATTTTTATGAAGTCCTACCATATTGTTGCTTATACAGTTTTTCAGATAATATGCCGCAGTTGCATTTTTGTTTCTTGTTAATGTAACAAATGTTTTCTGGCCTTTTAGCTCGATTAATATCACATATGTACGACACCTTCTTTAGTTTCATCATTCGAAATCTTTCTATAAGACAGTGAATCTTTCCTCACCATGTTATTGCTTTTGTGTTTCTAGTCAGCCTTACCCCCTGAGCAGCTAGCTTGGTGTGGAATGGACAGTGTACTACTTTACTGGGATGATATGCTTCTGATGGTGGGTCCTTATGGAGACCCTGTACGCTACTTTTATGATGAACCAGTTCTCCTTATCCCTGAATGTGATGGCGTTAGAATACTCTCCAATATGAGTATGGAATTTCTTCATCGAGTTCCAGATTCAACTGTCTCCATATTTCAGATTGGTAGCACACTACCTGCAGCTTTGCTTTATGATGCCTTAGATCATTTTGACAGGCGGAGTGCCAAGGTAGGCTATATCTTTTGGTATTTACTCTATGAAGTGACAAAGGACCAACTTGCCTATTTCGATCTTCAAATATTGCAGTTGAATGAGCATAGTTAGACTTGTCCATATGTGCATATATTTACATCTTCTAACAAATCTATATCTACTTCTGTATCCAACTTGTTTCCTCTTTTCTTTTTAATCAGCTCCTTGAGGTTCTTCCTTTTAGTCGTTTCTTCTAGGAACACCATCGTTTCAACTTCGTGCTTGGATATATGTAGCAGATAAAAACTGTTTGAAGTTCAGTTTTAGGTGAATTCTAATCTACTAATCACTTATCAGGCTGATGAGAATCTGAGACTAATACGGTCTTCGCTGCCCGAGGCGGTTGAAGCATGTATTGATGCAGCAGGTCATGAATTTGACGTCTCACAGCAGCGGACGCTTTTAAGAGCAGCAAGCTACGGCCAAGCCTTTTGCAGGTTGGTCTATTGGCTTGTAGAGATGATATTCTAAAATTTTTCTATTTTATTGCTTCCTGAGAAAAAGAGAAATTCCATCTTACCTTTTGCCTCTTGGGTTCCTAATCAAACTCTGATGCTGTATATGTTGACAATAGCTATCTAATGCTAGTTTCTTATGATCAGAGGAGGGAAAAAAGATCTGTCTCCTGGATTATGTAGATATTAGTTTTTTTTCCCTGTCTAAATTCCTTTTGAGGAGGCAGTGCTTTCTGTGACGCATCATTCAGTTAACGTCACTGCACTCATAATTCCTCGCTTATAAGAGGTATCAAAGGATAAGGCATTTCTTGCTATGGCGATCTACTTTCTTTCTGTTTGTTAAACAAGCTAATTGGTGATGGAGTAGTTTTATAAACAAGCGATGATGGGAACTTCTCAAATTGTATTAACCTGGTAATGTTGCTTTTCCTGTAAGCTACAGCAGAGAGATACTAGTAATGAAAAGTGTCTACATAAACTACTTTGATTTATTTACTGACTGTTCCTTCAAAAAACATATGCATCTGGGCTAGATGTTGATGGTATCTCTTGAAGATTAATGAATATTTGGCAGTTAAAGAGAGGCTTCCTTCAAACTGAGCTTGGGTCCAGCCCACTGGCAGCCTTGAAATAATAATTCTCTCTCCCTGTCCGGTTCATTGGAACCACTTTGTTCACCGAATAGTAGAACTGTGTGAACTGGGCGTTTGCTATATCATGAATATATGTTGTTCAACCTTCTTTTGGTAACACAATACGATTCACTGAATTCGGAGAGAAGTAAAACCTAGGACCATTTCCTTATTAATACTAGTTCTATACAGCGTTTTGGACAGTAAAAGGCGACAAGACGTGGCGAGGCACTCGCCTTTTTGAAATGTGGCACCAATTAATACCCAAAAAATTAAAATATTTAGTTACACATATAAATAATCAATATTTAGTTGCACATATAAATAATCAAAATCTCAATAGCAATAACATATTAAAAAATATTTCAATTAAAAAAACTGAAAATAGATAGTACATACTAAAAGTCTAGAACTTGAATGAGAAAAAGAAGAGCAAAAGTCAAAACAGTGAGAAAAAGAGAGGTAGAAGTAACTCTGAATAAGAAGGAAAAATAAACAGAGGAAGAAGAAATATAAAGAAGAAAAGAAGAAATACCTCTAAAGAAATAAACAAAGCAAAGCGACCCGCCGGAGAAAAGTCTAGTCTGGTTGACTGGTTGGAATCGTAGTTGCAGTCTAAGAGTGCAACTGTGCAAATTTGGAAAGAAAACCTTAAAATTAAATTTGAACTTTAAAATCCTAAATTGGTTGCCTTTTTAAAAATAAAACAGAGAAGGCGATGCCTTTCTTGCTTTTGTCGCCATTGTTGCCATGGTGTTGCCTTTTGAAGATCGCCTCGCCACAAAGCAAATAGGCGATGAAGCGTTGCCTCGCCTCTCGCCATTAGCAACGAGGCGATCGCCTTTCACAACACTGGTTCTAGATAAGGGGGAACCATAAATACCAGTAATCTATACTGTGGAGCAGTGAATGCGATGGCTTTGAGGGGATTGTGTTCCATATGTGAGGTGTGGTATTGTTGTACAATCAACATGTTTCTCATTTCGGTACATGCTAGAACGACGATGCCATCATAAGGTCAGTGTTTGACGCCGTCAGTTCAAAGTCATCAATGAAGCTTAAGGACTAAAATTTGATCCAAAGTGTGGGGAGGATGCAAATAAGAAAAGGATCTGTTCGTTTGTCCTTTTTTTTTTCTTTTTTGGGATTTCCATCTTTTTCTTGCTTTGAGTACAAGAGATGAAGGGTCAAGGCCACAAGGGACGGAGGGGAAGTGGAGTATTTTTGGAGTGTCAATTATGCGCTTGCGTACTTTAGGACCAATCACTAAACCAAAGTCAGTTCTCATGGGATTCCTTATCACGAGGAAGTGGCCAGAACTTTGCTTTATTTGCAACTTGAATGCTGAATATGCAGTACGTTGAAATGGATGAAACTAATGGAACAATGGGCCTTTATTTGTTTTTCTATAGACCTTCTCCTAACTTATGAAGCTGTTGGAAAGTTGATCTTATCTAGAGATCATTCTATTCTGATTTCTTCTCTTGTTAATGATATCCAGTTGGCTTTGGCAGCCATTTTCAACGGGACCGCATTCAAGAGATGAG</genome_strand>
        <mrna_strand>GAAGCTTTTGGCATCTTTTACACATGATGGAAGGCTTCTTGTTATGTCCACGGACTTCTCCAGTGTCATTTTCGAGTATCCTTGTGAG.....................................................................................................................................................................................................................................................................................................................TCAACCTTACCCCCTGAGCAGCTAGCTTGGTGTGGAATGGACAGTGTACTACTTTACTGGGATGATATGCTTCTGATGGTGGGTCCTTATGGAGACCCTGTACGCTACTTTTATGATGAACCAGTTCTCCTTATCCCTGAATGTGATGGCGTTAGAATACTCTCCAATATGAGTATGGAATTTCTTCATCGAGTTCCAGATTCAACTGTCTCCATATTTCAGATTGGTAGCACACTACCTGCAGCTTTGCTTTATGATGCCTTAGATCATTTTGACAGGCGGAGTGCCAAG.................................................................................................................................................................................................................................................................................................................................GCTGATGAGAATCTGAGACTAATACGGTCTTCGCTGCCCGAGGCGGTTGAAGCATGTATTGATGCAGCAGGTCATGAATTTGACGTCTCACAGCAGCGGACGCTTTTAAGAGCAGCAAGCTACGGCCAAGCCTTTTGCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATTTTCAACGGGACCGCATTCAAGAGATGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ERWM0i/sgn_ests_tomato_potato" ref_id="SGN-E207466" ref_strand="+" ref_description="SGN-E207466 [cLEC-36-K3]">
      <seq>ctgggatgatatgcttctgatggtgggtccttatggagaccctgtacgctacttttatgatgaaccagttctccttatccctgaatgtgatggcgttagaatactctccaatatgagtatggaatttcttcatcgagttccagattcaactgtctccatatttcagattggtagcacactacctgcagctttgctttatgatgccttagatcattttgacaggcggagtgccaaggctgatgagaatctgagactaatacggtcttcgctgcccgaggcggttgaagcatgtattgatgcagcaggtcatgaatttgacgtctcacagcagcggacgcttttaagagcagcaagctacggccaagccttttgcagccattttcaacgggaccgcattcaagagatgagtaaaactttacgagtattaaatgctgtacgtcacccagatattggcattcctctcagtattcaacagtataagtcgcttacacctgctgttctgattgctcgtcttattaatgctcatcgccaccttcttgcactacaaatatcagaatatcttagtatgaatcaggaggttgttgtcatgcactgggca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0116M01-43ylD/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0116M01.1" temp_strand="+" temp_description="C07HBa0116M01.1  AC212631.1 htgs_phase:2 submitted_to_sgn_as:gi|158262126|gb|AC212631.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0116M01, *** SEQUENCING IN PROGRESS ***">
        <position start="64729" stop="68440"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65029" g_stop="65263" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="235" r_length="235" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65264" i_stop="65584" i_length="321">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65585" g_stop="65724" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="375" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65725" i_stop="67891" i_length="2167">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.885" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67892" g_stop="67997" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="376" r_stop="481" r_length="106" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="67998" i_stop="68088" i_length="91">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="68089" g_stop="68181" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="482" r_stop="574" r_length="93" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0116M01.1" gen_strand="+" ref_id="SGN-E207466" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="0.960" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0116M01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E207466" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65029" e_stop="65263"/>
          <exon e_start="65585" e_stop="65724"/>
          <exon e_start="67892" e_stop="67997"/>
          <exon e_start="68089" e_stop="68181"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGGGATGATATGCTTCTGATGGTGGGTCCTTATGGAGACCCTGTACGCTACTTTTATGATGAACCAGTTCTCCTTATCCCTGAATGTGATGGCGTTAGAATACTCTCCAATATGAGTATGGAATTTCTTCATCGAGTTCCAGATTCAACTGTCTCCATATTTCAGATTGGTAGCACACTACCTGCAGCTTTGCTTTATGATGCCTTAGATCATTTTGACAGGCGGAGTGCCAAGGTAGGCTATATCTTTTGGTATTTACTCTATGAAGTGACAAAGGACCAACTTGCCTATTTCGATCTTCAAATATTGCAGTTGAATGAGCATAGTTAGACTTGTCCATATGTGCATATATTTACATCTTCTAACAAATCTATATCTACTTCTGTATCCAACTTGTTTCCTCTTTTCTTTTTAATCAGCTCCTTGAGGTTCTTCCTTTTAGTCGTTTCTTCTAGGAACACCATCGTTTCAACTTCGTGCTTGGATATATGTAGCAGATAAAAACTGTTTGAAGTTCAGTTTTAGGTGAATTCTAATCTACTAATCACTTATCAGGCTGATGAGAATCTGAGACTAATACGGTCTTCGCTGCCCGAGGCGGTTGAAGCATGTATTGATGCAGCAGGTCATGAATTTGACGTCTCACAGCAGCGGACGCTTTTAAGAGCAGCAAGCTACGGCCAAGCCTTTTGCAGGTTGGTCTATTGGCTTGTAGAGATGATATTCTAAAATTTTTCTATTTTATTGCTTCCTGAGAAAAAGAGAAATTCCATCTTACCTTTTGCCTCTTGGGTTCCTAATCAAACTCTGATGCTGTATATGTTGACAATAGCTATCTAATGCTAGTTTCTTATGATCAGAGGAGGGAAAAAAGATCTGTCTCCTGGATTATGTAGATATTAGTTTTTTTTCCCTGTCTAAATTCCTTTTGAGGAGGCAGTGCTTTCTGTGACGCATCATTCAGTTAACGTCACTGCACTCATAATTCCTCGCTTATAAGAGGTATCAAAGGATAAGGCATTTCTTGCTATGGCGATCTACTTTCTTTCTGTTTGTTAAACAAGCTAATTGGTGATGGAGTAGTTTTATAAACAAGCGATGATGGGAACTTCTCAAATTGTATTAACCTGGTAATGTTGCTTTTCCTGTAAGCTACAGCAGAGAGATACTAGTAATGAAAAGTGTCTACATAAACTACTTTGATTTATTTACTGACTGTTCCTTCAAAAAACATATGCATCTGGGCTAGATGTTGATGGTATCTCTTGAAGATTAATGAATATTTGGCAGTTAAAGAGAGGCTTCCTTCAAACTGAGCTTGGGTCCAGCCCACTGGCAGCCTTGAAATAATAATTCTCTCTCCCTGTCCGGTTCATTGGAACCACTTTGTTCACCGAATAGTAGAACTGTGTGAACTGGGCGTTTGCTATATCATGAATATATGTTGTTCAACCTTCTTTTGGTAACACAATACGATTCACTGAATTCGGAGAGAAGTAAAACCTAGGACCATTTCCTTATTAATACTAGTTCTATACAGCGTTTTGGACAGTAAAAGGCGACAAGACGTGGCGAGGCACTCGCCTTTTTGAAATGTGGCACCAATTAATACCCAAAAAATTAAAATATTTAGTTACACATATAAATAATCAATATTTAGTTGCACATATAAATAATCAAAATCTCAATAGCAATAACATATTAAAAAATATTTCAATTAAAAAAACTGAAAATAGATAGTACATACTAAAAGTCTAGAACTTGAATGAGAAAAAGAAGAGCAAAAGTCAAAACAGTGAGAAAAAGAGAGGTAGAAGTAACTCTGAATAAGAAGGAAAAATAAACAGAGGAAGAAGAAATATAAAGAAGAAAAGAAGAAATACCTCTAAAGAAATAAACAAAGCAAAGCGACCCGCCGGAGAAAAGTCTAGTCTGGTTGACTGGTTGGAATCGTAGTTGCAGTCTAAGAGTGCAACTGTGCAAATTTGGAAAGAAAACCTTAAAATTAAATTTGAACTTTAAAATCCTAAATTGGTTGCCTTTTTAAAAATAAAACAGAGAAGGCGATGCCTTTCTTGCTTTTGTCGCCATTGTTGCCATGGTGTTGCCTTTTGAAGATCGCCTCGCCACAAAGCAAATAGGCGATGAAGCGTTGCCTCGCCTCTCGCCATTAGCAACGAGGCGATCGCCTTTCACAACACTGGTTCTAGATAAGGGGGAACCATAAATACCAGTAATCTATACTGTGGAGCAGTGAATGCGATGGCTTTGAGGGGATTGTGTTCCATATGTGAGGTGTGGTATTGTTGTACAATCAACATGTTTCTCATTTCGGTACATGCTAGAACGACGATGCCATCATAAGGTCAGTGTTTGACGCCGTCAGTTCAAAGTCATCAATGAAGCTTAAGGACTAAAATTTGATCCAAAGTGTGGGGAGGATGCAAATAAGAAAAGGATCTGTTCGTTTGTCCTTTTTTTTTTCTTTTTTGGGATTTCCATCTTTTTCTTGCTTTGAGTACAAGAGATGAAGGGTCAAGGCCACAAGGGACGGAGGGGAAGTGGAGTATTTTTGGAGTGTCAATTATGCGCTTGCGTACTTTAGGACCAATCACTAAACCAAAGTCAGTTCTCATGGGATTCCTTATCACGAGGAAGTGGCCAGAACTTTGCTTTATTTGCAACTTGAATGCTGAATATGCAGTACGTTGAAATGGATGAAACTAATGGAACAATGGGCCTTTATTTGTTTTTCTATAGACCTTCTCCTAACTTATGAAGCTGTTGGAAAGTTGATCTTATCTAGAGATCATTCTATTCTGATTTCTTCTCTTGTTAATGATATCCAGTTGGCTTTGGCAGCCATTTTCAACGGGACCGCATTCAAGAGATGAGTAAAACTTTACGAGTATTAAATGCTGTACGTCACCCAGATATTGGCATTCCTCTCAGTATTCAACAGTATAAGGTACTGCATACTTCCTTGTTTTAAGTGGCGTTGTGCACTAAATTCTCTGCTTTCTTTGTATGGATCTTTTTCTGACATTTCCTCCTTGCAGTCGCTTACACCTGCTGTTCTGATTGCTCGTCTTATTAATGCTCATCGCCACCTTCTTGCACTACAAATATCAGAATATCTTAGTATGAATCAG</genome_strand>
        <mrna_strand>CTGGGATGATATGCTTCTGATGGTGGGTCCTTATGGAGACCCTGTACGCTACTTTTATGATGAACCAGTTCTCCTTATCCCTGAATGTGATGGCGTTAGAATACTCTCCAATATGAGTATGGAATTTCTTCATCGAGTTCCAGATTCAACTGTCTCCATATTTCAGATTGGTAGCACACTACCTGCAGCTTTGCTTTATGATGCCTTAGATCATTTTGACAGGCGGAGTGCCAAG.................................................................................................................................................................................................................................................................................................................................GCTGATGAGAATCTGAGACTAATACGGTCTTCGCTGCCCGAGGCGGTTGAAGCATGTATTGATGCAGCAGGTCATGAATTTGACGTCTCACAGCAGCGGACGCTTTTAAGAGCAGCAAGCTACGGCCAAGCCTTTTGCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATTTTCAACGGGACCGCATTCAAGAGATGAGTAAAACTTTACGAGTATTAAATGCTGTACGTCACCCAGATATTGGCATTCCTCTCAGTATTCAACAGTATAAG...........................................................................................TCGCTTACACCTGCTGTTCTGATTGCTCGTCTTATTAATGCTCATCGCCACCTTCTTGCACTACAAATATCAGAATATCTTAGTATGAATCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>37</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="1593" PGL_stop="885"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="1593" e_stop="885"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="1593" e_stop="885" e_length="709"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1593" stop="938"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202470" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1593" stop="1080"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202535" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1592" stop="903"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377218" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1592" stop="1057"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231246" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1592" stop="1120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231390" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1592" stop="1194"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233489" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1583" stop="885"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212208" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1508" stop="885"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E418343" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCATTTCTATTTTCCCTAAACAAGTTACTTTCTCTTTTTCCACTCTAAACTATAGTAATACATACACACTTCCCAACTCCCAAGAAAAGAAAAAAAAAAGAAAATTCAAGAATCAATAGCTCTTGTTAATATTGCATAAATTCAAGAATCTTGAGTTATTTTCTCTTCATCATTTTGTTCAAGACTCTTTTTTGTGTTTTAGATCCCAACAACAAAAAAGAAAACCCCCTTTTTTTGCTTCTCTATGTCTGATAATAACCCTTTTAATCATGATTATGCATTTCCTTTCTTTGGTGAAAATCCCTCAATTTATGGTAATCAAGCCAATAACACACAAAACCCTCATCATAATCATCATGATTTTGACTATTCTTCATCTTATATGAGTAATCTCACAGAGTGTTTACATGGAGGGTCAATGGATCATTACAACACTTTGTCAAGTGCTTTTGGGATGAATAATTGTTCATCATCCTCTGAAGTTGTTTGTCCACAACCATCAATAGATCATCATCAAGAATGTTCTAGAAAGAATATTAATAGTGTTGATAATCAAATTCCATTAACACCTAATTCATTAATCTCTTCATCTTCTAATAGTGAGGTTGGTGGATGTCATGAAGAAGATTCTTCAAAAATCAAGAAAGATGATGATCAGTGTGAATTAGATGGAGATGATGATGATGATGATAATAAGTCTAAGAAAGT</gDNA_template>
            <first_frame> F  I  S  I  F  P  K  Q  V  T  F  S  F  S  T  L  N  Y  S  N  T  Y  T  L  P  N  S  Q  E  K  K  K  K  R  K  F  K  N  Q  *  L  L  L  I  L  H  K  F  K  N  L  E  L  F  S  L  H  H  F  V  Q  D  S  F  L  C  F  R  S  Q  Q  Q  K  R  K  P  P  F  F  A  S  L  C  L  I  I  T  L  L  I  M  I  M  H  F  L  S  L  V  K  I  P  Q  F  M  V  I  K  P  I  T  H  K  T  L  I  I  I  I  M  I  L  T  I  L  H  L  I  *  V  I  S  Q  S  V  Y  M  E  G  Q  W  I  I  T  T  L  C  Q  V  L  L  G  *  I  I  V  H  H  P  L  K  L  F  V  H  N  H  Q  *  I  I  I  K  N  V  L  E  R  I  L  I  V  L  I  I  K  F  H  *  H  L  I  H  *  S  L  H  L  L  I  V  R  L  V  D  V  M  K  K  I  L  Q  K  S  R  K  M  M  I  S  V  N  *  M  E  M  M  M  M  M  I  I  S  L  R  K  </first_frame>
            <second_frame>  S  F  L  F  S  L  N  K  L  L  S  L  F  P  L  *  T  I  V  I  H  T  H  F  P  T  P  K  K  R  K  K  K  E  N  S  R  I  N  S  S  C  *  Y  C  I  N  S  R  I  L  S  Y  F  L  F  I  I  L  F  K  T  L  F  C  V  L  D  P  N  N  K  K  E  N  P  L  F  L  L  L  Y  V  *  *  *  P  F  *  S  *  L  C  I  S  F  L  W  *  K  S  L  N  L  W  *  S  S  Q  *  H  T  K  P  S  S  *  S  S  *  F  *  L  F  F  I  L  Y  E  *  S  H  R  V  F  T  W  R  V  N  G  S  L  Q  H  F  V  K  C  F  W  D  E  *  L  F  I  I  L  *  S  C  L  S  T  T  I  N  R  S  S  S  R  M  F  *  K  E  Y  *  *  C  *  *  S  N  S  I  N  T  *  F  I  N  L  F  I  F  *  *  *  G  W  W  M  S  *  R  R  F  F  K  N  Q  E  R  *  *  S  V  *  I  R  W  R  *  *  *  *  *  *  *  V  *  E  S </second_frame>
            <third_frame>   H  F  Y  F  P  *  T  S  Y  F  L  F  F  H  S  K  L  *  *  Y  I  H  T  S  Q  L  P  R  K  E  K  K  K  K  I  Q  E  S  I  A  L  V  N  I  A  *  I  Q  E  S  *  V  I  F  S  S  S  F  C  S  R  L  F  F  V  F  *  I  P  T  T  K  K  K  T  P  F  F  C  F  S  M  S  D  N  N  P  F  N  H  D  Y  A  F  P  F  F  G  E  N  P  S  I  Y  G  N  Q  A  N  N  T  Q  N  P  H  H  N  H  H  D  F  D  Y  S  S  S  Y  M  S  N  L  T  E  C  L  H  G  G  S  M  D  H  Y  N  T  L  S  S  A  F  G  M  N  N  C  S  S  S  S  E  V  V  C  P  Q  P  S  I  D  H  H  Q  E  C  S  R  K  N  I  N  S  V  D  N  Q  I  P  L  T  P  N  S  L  I  S  S  S  S  N  S  E  V  G  G  C  H  E  E  D  S  S  K  I  K  K  D  D  D  Q  C  E  L  D  G  D  D  D  D  D  D  N  K  S  K  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0116M01.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="1390" stop="887"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>504</number_coding_nucleotides>
                  <number_encoded_amino_acids>168</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IPTTKKKTPFFCFSMSDNNPFNHDYAFPFFGENPSIYGNQANNTQNPHHNHHDFDYSSSYMSNLTECLHGGSMDHYNTLSSAFGMNNCSSSSEVVCPQPSIDHHQECSRKNINSVDNQIPLTPNSLISSSSNSEVGGCHEEDSSKIKKDDDQCELDGDDDDDDNKSKK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="13195" PGL_stop="9260"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="13195" e_stop="12734"/>
            <exon e_start="12323" e_stop="11611"/>
            <exon e_start="11518" e_stop="11414"/>
            <exon e_start="11267" e_stop="11145"/>
            <exon e_start="10867" e_stop="10697"/>
            <exon e_start="10585" e_stop="10456"/>
            <exon e_start="10376" e_stop="10167"/>
            <exon e_start="9456" e_stop="9260"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.984" e_score="0.948"/>
          <exon-intron don_prob="0.763" acc_prob="0.983" e_score="0.960"/>
          <exon-intron don_prob="0.997" acc_prob="0.946" e_score="0.990"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.999" e_score="0.977"/>
          <exon-intron don_prob="0.992" acc_prob="0.988" e_score="0.989"/>
          <exon-intron don_prob="0.978" acc_prob="0.999" e_score="0.995"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.948">
            <gDNA_exon_boundary e_start="13195" e_stop="12734" e_length="462"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.984">
            <gDNA_intron_boundary i_start="12733" i_stop="12324" i_length="410"/>
          </intron>
          <exon e_serial="2" e_score="0.960">
            <gDNA_exon_boundary e_start="12323" e_stop="11611" e_length="713"/>
          </exon>
          <intron i_serial="2" don_prob="0.763" acc_prob="0.983">
            <gDNA_intron_boundary i_start="11610" i_stop="11519" i_length="92"/>
          </intron>
          <exon e_serial="3" e_score="0.990">
            <gDNA_exon_boundary e_start="11518" e_stop="11414" e_length="105"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.946">
            <gDNA_intron_boundary i_start="11413" i_stop="11268" i_length="146"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="11267" e_stop="11145" e_length="123"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="11144" i_stop="10868" i_length="277"/>
          </intron>
          <exon e_serial="5" e_score="0.977">
            <gDNA_exon_boundary e_start="10867" e_stop="10697" e_length="171"/>
          </exon>
          <intron i_serial="5" don_prob="0.992" acc_prob="0.999">
            <gDNA_intron_boundary i_start="10696" i_stop="10586" i_length="111"/>
          </intron>
          <exon e_serial="6" e_score="0.989">
            <gDNA_exon_boundary e_start="10585" e_stop="10456" e_length="130"/>
          </exon>
          <intron i_serial="6" don_prob="0.992" acc_prob="0.988">
            <gDNA_intron_boundary i_start="10455" i_stop="10377" i_length="79"/>
          </intron>
          <exon e_serial="7" e_score="0.995">
            <gDNA_exon_boundary e_start="10376" e_stop="10167" e_length="210"/>
          </exon>
          <intron i_serial="7" don_prob="0.978" acc_prob="0.999">
            <gDNA_intron_boundary i_start="10166" i_stop="9457" i_length="710"/>
          </intron>
          <exon e_serial="8" e_score="0.995">
            <gDNA_exon_boundary e_start="9456" e_stop="9260" e_length="197"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13195" stop="12734"/>
              <exon start="12323" stop="12071"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482898" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13152" stop="12791"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322755" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13123" stop="12734"/>
              <exon start="12323" stop="12298"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279121" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12116" stop="11611"/>
              <exon start="11518" stop="11414"/>
              <exon start="11267" stop="11145"/>
              <exon start="10867" stop="10861"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E598870" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12016" stop="11611"/>
              <exon start="11518" stop="11414"/>
              <exon start="11267" stop="11145"/>
              <exon start="10867" stop="10745"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E623789" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11828" stop="11611"/>
              <exon start="11518" stop="11414"/>
              <exon start="11267" stop="11145"/>
              <exon start="10867" stop="10697"/>
              <exon start="10585" stop="10475"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E558256" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10547" stop="10456"/>
              <exon start="10376" stop="10167"/>
              <exon start="9456" stop="9260"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E553067" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9419" stop="9262"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E619827" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATCAAGAACCTCACCTCTTTATCTCTCTCTCTCTCTCTCTAGCATAGATTTCCTCCATTGCAAACAAAGCTTCCACCTTTACAGCTTTTTAAGGTCCATATTGCCTCTACATTCACATTACCCACCAACCATTTTGTTTAACCCACCATTAAAATAAAGTTTTTCTAGTTTTTCTTCACAAAGATTGGATTTTTGTCTGGTTTTCTTTGAACAGTTGCTTTAGCTTCTGTTTTTTTTTTCACTGTTTCTTTTTGACCCATTTCAGCTGACATCCTTCTTCTTCTGAACTGTTAGCTTTCTTGGCTTTTGTGGGGTTCTTTTGGTTTTCACTTCTGCATTGGCTTATCTATGTGTTTTGGGTTTCTGTTTGAGCAAAAAGAGAAACTTTCTTTGCTTCTTTGGGTTCTTAAGGAAGAAGATCAAGGGGGTTAAGTTTGGTTTCTGTAGATCACTGGTGTAAAG : GGGGCAATGGAGTAAATCTGAGTCTGGAATTTTGATTTCTTTTAATCTGCTGTGCTGGAAATGTCTTCTGGGGACTTGAAAAGTGATTTGTCTAGGAAGACATCATTTTTGGGTCTCAAACTATGGGTTGTAATGGGGTTATGTGTTGGTGTATTTATCGTTGGGATACTATGTATGTTGTCGATATGGGTAACGTGTAGGAGAAAATCTAGAAGGACGTTGGACGGGTATTCCCATTGCCAAATACCCCATGTTTCTAAGGATATTAAGGTTGATAGAGTAGGTGCTGCGAATGTACATGATCATCCTGAAAGCTTGTTTCTAACTATTCACGATAAACCAAATGAAACAACGTCGGAGAAGATGTTAGTCCATTTGGGTAGGAGCAAATCAAGTGATGCTGATAACATCAGCCAATGTAGTTCAATATATCATCATGAAAGGGGCTTTAGTTCACAGTCAGGGGAAGAGGGAAGTTCAGGAACAGTGCGAAAACAACCATCCTATGGTATTGCAATGCCTTCTCCTTTGATTGGCTTGCCAGAAGTCTCACAGCTCGGGTGGGGCCATTGGTTCACGCTTAGAGATCTTGAACTTGCAACAAATCGTTTCTCTGCTGAGAATGTGCTTGGCGAAGGTGGATATGGTGTGGTTTACAAAGGAAGGTTGATCAATGGTACAGAAGTTGCTGTAAAGAAGCTCCTAAATAATCT : TGGCCAAGCTGAGAAAGAGTTTCGGGTTGAAGTAGAGGCAATTGGTCATGTTAGACACAAGAATCTAGTGCGTCTTCTTGGTTATTGCATTGAAGGCGTTCACAG : GATGCTGGTTTATGAGTATGTCAATAATGGAAACTTGGAGCAGTGGCTGCATGGAGCTATGAGACATCACGGTACACTTACATGGGAAGCCCGTGTGAAGGTTCTCCTTGGTACTGCAAAAGC : GCTTGCTTACTTGCATGAAGCCATAGAACCTAAAGTAATCCACCGAGACATTAAGTCTAGTAATATCTTGATTGATGACGCGTTCAATGCCAAGGTCTCTGATTTTGGATTGGCAAAACTATTAGACTCAGGAGAGAGCCACATCACCACCCGAGTCATGGGTACATTTGG : ATATGTGGCTCCAGAATATGCTAATACTGGATTGTTAAATGAGAAGAGCGATATTTACAGTTTTGGTGTTCTAGTGCTAGAAGCAGTGACTGGTAGAGATCCTGTGGACTACAGCCGTTCTGCTAATGAG : GTTAATCTTGTTGAATGGCTCAAAATGATGGTTGGAAATCGAAGGGCCGAGGAAGTTGTGGATTCTGATATTGAAGTTAGGCCTAGTACTCGTGCTCTGAAACGGGCACTTCTGGTTGCACTTAGATGTGTTGATCCTGATTCAGAAAAACGACCCCGGATGAGCCAAGTAGTTAGAATGCTTGAAACTGAAGAAGTTCCATATCGCGAG : GATCGACGAAACAGGAGAAGTAGAACAGCCAGCATGGAGATAGAATCAGTAAAGGAAAGTTGCAGCAGCTCAGCTGATGTGGAAAGCAAGGTGGGGAGAGCAGATAGCAGCACATCTGATACAATTCTTGGATAGGGACTCTGACACACATGCACATGACTCCAAGTGGAATGTATAATTGCATCATATTCCCCCCC</gDNA_template>
            <first_frame> I  K  N  L  T  S  L  S  L  S  L  S  L  *  H  R  F  P  P  L  Q  T  K  L  P  P  L  Q  L  F  K  V  H  I  A  S  T  F  T  L  P  T  N  H  F  V  *  P  T  I  K  I  K  F  F  *  F  F  F  T  K  I  G  F  L  S  G  F  L  *  T  V  A  L  A  S  V  F  F  F  T  V  S  F  *  P  I  S  A  D  I  L  L  L  L  N  C  *  L  S  W  L  L  W  G  S  F  G  F  H  F  C  I  G  L  S  M  C  F  G  F  L  F  E  Q  K  E  K  L  S  L  L  L  W  V  L  K  E  E  D  Q  G  G  *  V  W  F  L  *  I  T  G  V  K  :  G  A  M  E  *  I  *  V  W  N  F  D  F  F  *  S  A  V  L  E  M  S  S  G  D  L  K  S  D  L  S  R  K  T  S  F  L  G  L  K  L  W  V  V  M  G  L  C  V  G  V  F  I  V  G  I  L  C  M  L  S  I  W  V  T  C  R  R  K  S  R  R  T  L  D  G  Y  S  H  C  Q  I  P  H  V  S  K  D  I  K  V  D  R  V  G  A  A  N  V  H  D  H  P  E  S  L  F  L  T  I  H  D  K  P  N  E  T  T  S  E  K  M  L  V  H  L  G  R  S  K  S  S  D  A  D  N  I  S  Q  C  S  S  I  Y  H  H  E  R  G  F  S  S  Q  S  G  E  E  G  S  S  G  T  V  R  K  Q  P  S  Y  G  I  A  M  P  S  P  L  I  G  L  P  E  V  S  Q  L  G  W  G  H  W  F  T  L  R  D  L  E  L  A  T  N  R  F  S  A  E  N  V  L  G  E  G  G  Y  G  V  V  Y  K  G  R  L  I  N  G  T  E  V  A  V  K  K  L  L  N  N  L :   G  Q  A  E  K  E  F  R  V  E  V  E  A  I  G  H  V  R  H  K  N  L  V  R  L  L  G  Y  C  I  E  G  V  H  R :   M  L  V  Y  E  Y  V  N  N  G  N  L  E  Q  W  L  H  G  A  M  R  H  H  G  T  L  T  W  E  A  R  V  K  V  L  L  G  T  A  K  A :   L  A  Y  L  H  E  A  I  E  P  K  V  I  H  R  D  I  K  S  S  N  I  L  I  D  D  A  F  N  A  K  V  S  D  F  G  L  A  K  L  L  D  S  G  E  S  H  I  T  T  R  V  M  G  T  F  G :   Y  V  A  P  E  Y  A  N  T  G  L  L  N  E  K  S  D  I  Y  S  F  G  V  L  V  L  E  A  V  T  G  R  D  P  V  D  Y  S  R  S  A  N  E  :  V  N  L  V  E  W  L  K  M  M  V  G  N  R  R  A  E  E  V  V  D  S  D  I  E  V  R  P  S  T  R  A  L  K  R  A  L  L  V  A  L  R  C  V  D  P  D  S  E  K  R  P  R  M  S  Q  V  V  R  M  L  E  T  E  E  V  P  Y  R  E  :  D  R  R  N  R  R  S  R  T  A  S  M  E  I  E  S  V  K  E  S  C  S  S  S  A  D  V  E  S  K  V  G  R  A  D  S  S  T  S  D  T  I  L  G  *  G  L  *  H  T  C  T  *  L  Q  V  E  C  I  I  A  S  Y  S  P   </first_frame>
            <second_frame>  S  R  T  S  P  L  Y  L  S  L  S  L  S  S  I  D  F  L  H  C  K  Q  S  F  H  L  Y  S  F  L  R  S  I  L  P  L  H  S  H  Y  P  P  T  I  L  F  N  P  P  L  K  *  S  F  S  S  F  S  S  Q  R  L  D  F  C  L  V  F  F  E  Q  L  L  *  L  L  F  F  F  S  L  F  L  F  D  P  F  Q  L  T  S  F  F  F  *  T  V  S  F  L  G  F  C  G  V  L  L  V  F  T  S  A  L  A  Y  L  C  V  L  G  F  C  L  S  K  K  R  N  F  L  C  F  F  G  F  L  R  K  K  I  K  G  V  K  F  G  F  C  R  S  L  V  *  R :   G  Q  W  S  K  S  E  S  G  I  L  I  S  F  N  L  L  C  W  K  C  L  L  G  T  *  K  V  I  C  L  G  R  H  H  F  W  V  S  N  Y  G  L  *  W  G  Y  V  L  V  Y  L  S  L  G  Y  Y  V  C  C  R  Y  G  *  R  V  G  E  N  L  E  G  R  W  T  G  I  P  I  A  K  Y  P  M  F  L  R  I  L  R  L  I  E  *  V  L  R  M  Y  M  I  I  L  K  A  C  F  *  L  F  T  I  N  Q  M  K  Q  R  R  R  R  C  *  S  I  W  V  G  A  N  Q  V  M  L  I  T  S  A  N  V  V  Q  Y  I  I  M  K  G  A  L  V  H  S  Q  G  K  R  E  V  Q  E  Q  C  E  N  N  H  P  M  V  L  Q  C  L  L  L  *  L  A  C  Q  K  S  H  S  S  G  G  A  I  G  S  R  L  E  I  L  N  L  Q  Q  I  V  S  L  L  R  M  C  L  A  K  V  D  M  V  W  F  T  K  E  G  *  S  M  V  Q  K  L  L  *  R  S  S  *  I  I   : L  A  K  L  R  K  S  F  G  L  K  *  R  Q  L  V  M  L  D  T  R  I  *  C  V  F  L  V  I  A  L  K  A  F  T   : G  C  W  F  M  S  M  S  I  M  E  T  W  S  S  G  C  M  E  L  *  D  I  T  V  H  L  H  G  K  P  V  *  R  F  S  L  V  L  Q  K   : R  L  L  T  C  M  K  P  *  N  L  K  *  S  T  E  T  L  S  L  V  I  S  *  L  M  T  R  S  M  P  R  S  L  I  L  D  W  Q  N  Y  *  T  Q  E  R  A  T  S  P  P  E  S  W  V  H  L   : D  M  W  L  Q  N  M  L  I  L  D  C  *  M  R  R  A  I  F  T  V  L  V  F  *  C  *  K  Q  *  L  V  E  I  L  W  T  T  A  V  L  L  M  R :   L  I  L  L  N  G  S  K  *  W  L  E  I  E  G  P  R  K  L  W  I  L  I  L  K  L  G  L  V  L  V  L  *  N  G  H  F  W  L  H  L  D  V  L  I  L  I  Q  K  N  D  P  G  *  A  K  *  L  E  C  L  K  L  K  K  F  H  I  A  R :   I  D  E  T  G  E  V  E  Q  P  A  W  R  *  N  Q  *  R  K  V  A  A  A  Q  L  M  W  K  A  R  W  G  E  Q  I  A  A  H  L  I  Q  F  L  D  R  D  S  D  T  H  A  H  D  S  K  W  N  V  *  L  H  H  I  P  P  </second_frame>
            <third_frame>   Q  E  P  H  L  F  I  S  L  S  L  S  L  A  *  I  S  S  I  A  N  K  A  S  T  F  T  A  F  *  G  P  Y  C  L  Y  I  H  I  T  H  Q  P  F  C  L  T  H  H  *  N  K  V  F  L  V  F  L  H  K  D  W  I  F  V  W  F  S  L  N  S  C  F  S  F  C  F  F  F  H  C  F  F  L  T  H  F  S  *  H  P  S  S  S  E  L  L  A  F  L  A  F  V  G  F  F  W  F  S  L  L  H  W  L  I  Y  V  F  W  V  S  V  *  A  K  R  E  T  F  F  A  S  L  G  S  *  G  R  R  S  R  G  L  S  L  V  S  V  D  H  W  C  K   : G  G  N  G  V  N  L  S  L  E  F  *  F  L  L  I  C  C  A  G  N  V  F  W  G  L  E  K  *  F  V  *  E  D  I  I  F  G  S  Q  T  M  G  C  N  G  V  M  C  W  C  I  Y  R  W  D  T  M  Y  V  V  D  M  G  N  V  *  E  K  I  *  K  D  V  G  R  V  F  P  L  P  N  T  P  C  F  *  G  Y  *  G  *  *  S  R  C  C  E  C  T  *  S  S  *  K  L  V  S  N  Y  S  R  *  T  K  *  N  N  V  G  E  D  V  S  P  F  G  *  E  Q  I  K  *  C  *  *  H  Q  P  M  *  F  N  I  S  S  *  K  G  L  *  F  T  V  R  G  R  G  K  F  R  N  S  A  K  T  T  I  L  W  Y  C  N  A  F  S  F  D  W  L  A  R  S  L  T  A  R  V  G  P  L  V  H  A  *  R  S  *  T  C  N  K  S  F  L  C  *  E  C  A  W  R  R  W  I  W  C  G  L  Q  R  K  V  D  Q  W  Y  R  S  C  C  K  E  A  P  K  *  S  :  W  P  S  *  E  R  V  S  G  *  S  R  G  N  W  S  C  *  T  Q  E  S  S  A  S  S  W  L  L  H  *  R  R  S  Q  :  D  A  G  L  *  V  C  Q  *  W  K  L  G  A  V  A  A  W  S  Y  E  T  S  R  Y  T  Y  M  G  S  P  C  E  G  S  P  W  Y  C  K  S  :  A  C  L  L  A  *  S  H  R  T  *  S  N  P  P  R  H  *  V  *  *  Y  L  D  *  *  R  V  Q  C  Q  G  L  *  F  W  I  G  K  T  I  R  L  R  R  E  P  H  H  H  P  S  H  G  Y  I  W  :  I  C  G  S  R  I  C  *  Y  W  I  V  K  *  E  E  R  Y  L  Q  F  W  C  S  S  A  R  S  S  D  W  *  R  S  C  G  L  Q  P  F  C  *  *   : G  *  S  C  *  M  A  Q  N  D  G  W  K  S  K  G  R  G  S  C  G  F  *  Y  *  S  *  A  *  Y  S  C  S  E  T  G  T  S  G  C  T  *  M  C  *  S  *  F  R  K  T  T  P  D  E  P  S  S  *  N  A  *  N  *  R  S  S  I  S  R   : G  S  T  K  Q  E  K  *  N  S  Q  H  G  D  R  I  S  K  G  K  L  Q  Q  L  S  *  C  G  K  Q  G  G  E  S  R  *  Q  H  I  *  Y  N  S  W  I  G  T  L  T  H  M  H  M  T  P  S  G  M  Y  N  C  I  I  F  P  P </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0116M01.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="12278" stop="11611"/>
                    <exon start="11518" stop="11414"/>
                    <exon start="11267" stop="11145"/>
                    <exon start="10867" stop="10697"/>
                    <exon start="10585" stop="10456"/>
                    <exon start="10376" stop="10167"/>
                    <exon start="9456" stop="9322"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1539</number_coding_nucleotides>
                  <number_encoded_amino_acids>513</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SAVLEMSSGDLKSDLSRKTSFLGLKLWVVMGLCVGVFIVGILCMLSIWVTCRRKSRRTLDGYSHCQIPHVSKDIKVDRVGAANVHDHPESLFLTIHDKPNETTSEKMLVHLGRSKSSDADNISQCSSIYHHERGFSSQSGEEGSSGTVRKQPSYGIAMPSPLIGLPEVSQLGWGHWFTLRDLELATNRFSAENVLGEGGYGVVYKGRLINGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRHHGTLTWEARVKVLLGTAKALAYLHEAIEPKVIHRDIKSSNILIDDAFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLVLEAVTGRDPVDYSRSANEVNLVEWLKMMVGNRRAEEVVDSDIEVRPSTRALKRALLVALRCVDPDSEKRPRMSQVVRMLETEEVPYREDRRNRRSRTASMEIESVKESCSSSADVESKVGRADSSTSDTILG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="29037" PGL_stop="48395"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="41521" e_stop="41557"/>
            <exon e_start="41624" e_stop="41739"/>
            <exon e_start="41852" e_stop="41901"/>
            <exon e_start="44555" e_stop="44667"/>
            <exon e_start="44739" e_stop="44968"/>
            <exon e_start="45763" e_stop="46560"/>
            <exon e_start="46652" e_stop="46702"/>
            <exon e_start="47074" e_stop="47259"/>
            <exon e_start="47928" e_stop="48395"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.847" e_score="1.000"/>
          <exon-intron don_prob="0.582" acc_prob="0.973" e_score="0.991"/>
          <exon-intron don_prob="0.989" acc_prob="0.996" e_score="0.920"/>
          <exon-intron don_prob="0.343" acc_prob="0.760" e_score="0.991"/>
          <exon-intron don_prob="0.971" acc_prob="0.000" e_score="0.978"/>
          <exon-intron don_prob="0.999" acc_prob="0.447" e_score="0.984"/>
          <exon-intron don_prob="0.989" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.985" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="41521" e_stop="41557" e_length="37"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.847">
            <gDNA_intron_boundary i_start="41558" i_stop="41623" i_length="66"/>
          </intron>
          <exon e_serial="2" e_score="0.991">
            <gDNA_exon_boundary e_start="41624" e_stop="41739" e_length="116"/>
          </exon>
          <intron i_serial="2" don_prob="0.582" acc_prob="0.973">
            <gDNA_intron_boundary i_start="41740" i_stop="41851" i_length="112"/>
          </intron>
          <exon e_serial="3" e_score="0.920">
            <gDNA_exon_boundary e_start="41852" e_stop="41901" e_length="50"/>
          </exon>
          <intron i_serial="3" don_prob="0.989" acc_prob="0.996">
            <gDNA_intron_boundary i_start="41902" i_stop="44554" i_length="2653"/>
          </intron>
          <exon e_serial="4" e_score="0.991">
            <gDNA_exon_boundary e_start="44555" e_stop="44667" e_length="113"/>
          </exon>
          <intron i_serial="4" don_prob="0.343" acc_prob="0.760">
            <gDNA_intron_boundary i_start="44668" i_stop="44738" i_length="71"/>
          </intron>
          <exon e_serial="5" e_score="0.978">
            <gDNA_exon_boundary e_start="44739" e_stop="44968" e_length="230"/>
          </exon>
          <intron i_serial="5" don_prob="0.971" acc_prob="0.000">
            <gDNA_intron_boundary i_start="44969" i_stop="45762" i_length="794"/>
          </intron>
          <exon e_serial="6" e_score="0.984">
            <gDNA_exon_boundary e_start="45763" e_stop="46560" e_length="798"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.447">
            <gDNA_intron_boundary i_start="46561" i_stop="46651" i_length="91"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="46652" e_stop="46702" e_length="51"/>
          </exon>
          <intron i_serial="7" don_prob="0.989" acc_prob="0.983">
            <gDNA_intron_boundary i_start="46703" i_stop="47073" i_length="371"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="47074" e_stop="47259" e_length="186"/>
          </exon>
          <intron i_serial="8" don_prob="0.999" acc_prob="0.985">
            <gDNA_intron_boundary i_start="47260" i_stop="47927" i_length="668"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="47928" e_stop="48395" e_length="468"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41521" stop="41557"/>
              <exon start="41624" stop="41739"/>
              <exon start="41852" stop="41901"/>
              <exon start="44555" stop="44667"/>
              <exon start="44739" stop="44968"/>
              <exon start="45763" stop="46055"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E603493" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44876" stop="44968"/>
              <exon start="45763" stop="46260"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E434186" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44876" stop="44968"/>
              <exon start="45763" stop="46111"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E405149" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45978" stop="46432"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242115" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46204" stop="46560"/>
              <exon start="46652" stop="46702"/>
              <exon start="47074" stop="47259"/>
              <exon start="47928" stop="48203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704804" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46521" stop="46560"/>
              <exon start="46652" stop="46702"/>
              <exon start="47074" stop="47259"/>
              <exon start="47928" stop="48365"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577695" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46545" stop="46560"/>
              <exon start="46652" stop="46702"/>
              <exon start="47074" stop="47259"/>
              <exon start="47928" stop="48310"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E426413" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48040" stop="48395"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352834" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCGAGGAGAAGCATTACAAACCATAGATATGAATCAA : GATAATTATTTTGAAGAAGCTTTCAAGATGAGGAATGTATTGGAAGAATTCTTGAAACCTCATAGAAAGCGAAGACCGACAATACTAGGTTTAAGGGAGCATATTTTTACTGGAAG : GAGACCAGTTTTGTAACCATCGGACAAAGAATTTTAGCAAACCCCTTGAG : GGTAAGATTTCATTATGGTCATCCTGATATTTTCGACAGAATCTTTCATGTAACAAGGGGTGGTATTAGCAAAGCTTCTAAAACGATTAACCTGAGTGAAGATATCTTTTCAG : GTTATAATTCAACTTTACGTGGAGGATTCGTAACACATCATGAGTACATCCAAGTAGGGAAGGGTCGTGATGTGGGGATGAATCAGATCTCTCAATTTGAGGCAAAGGTGGCAAATGGAAATGGAGAACAAACACTGAGTCGTGATGTCTATAGGCTTGGGCGTCGATTTGATTTCTACAGGATGTTGTCGTTCTACTTCACCACAGTTGGTTTCTACTTCAGCAGCATG : GCTACAGTGCTTACTGTCTATGTGTTTCTATATGGACGGTTATATATGGTCTTGAGTGGATTGGAAAAGCGAATTCTGGAGGATCCCACAGTTCGTCAGTCCAAAGCTCTTGAAGAGGCTATGGCTCCCTCATCTATATCTCAGCTGGGCTTGTTGCTTGTACTCCCTATGGTAATGGAAATTGGGCTGGAGAGAGGATTTCGCACGGCCCTGGGTGATTTTGTAATAATGCAGCTGCAGCTTGCTTCTGTATTTTTTACATTCCAACTCGGAACAAAAGCACATTATTACGGTAGAACTATCTTGCATGGAGGTTCTAAATATCGAGCTACTGGTCGTGGCTTTGTTGTTTTTCATGCAAAGTATGCAGATAACTACAGGATGTATTCTCGCAGTCACTTTGTCAAGGGGCTTGAGCTGTTTATGCTGTTAATTGTCTATGAAGTCTATGGGGAATCATATCGTGAATCACAGTTATACTTGTTTGTTACTATTTCAATTTGGTTCTTGGTAGGTTCCTGGTTGTTTGCTCCCTTTGTGTTCAATCCGTCTGGTTTCGACTGGCAAAAGACAGTAGATGATTGGACAGATTGGAAGAGGTGGATGGGAAATCGTGGAGGCATTGGGATTTCACCGGATAAAAGTTGGGAATCTTGGTGGAATGGGGAGCAGGAACATCTAAAACACACAAATCTAAGGGGTAGAGTGATTGACATTATCCTTGCCTTCCGCTTTTTCATTTTCCAGTATGGAATTGTCTATCACCTTGATATAGCTCACGGCAGCAGAAATTTACTG : GTGTATGGACTTTCTTGGTTTGTTATGCTAACCGCTCTTCTGGTCTTGAAG : ATGGTATCAATGGGCAGACGAAGATTTGGGACTGATTTTCAGCTCATGTTCAGAATTCTGAAAGCACTTCTATTCCTTGGATTCGTATCTGTCATGACTGTGTTATTTGTTGTTTGTGGCCTGACCATGAGTGATCTATTTGCTGCCATTCTTGCCTTCGTACCGACAGGCTGGGGCATTCTTCTT : ATTGGTCAAGCATGCAGGCCCTGTTTTAAGGGACTTGGAATTTGGGATTCAGTGATGGAGTTGGCACGGGCATACGAATGCATCATGGGTCTGTTCATATTCGCGCCAGTTGTGGTCTTGTCTTGGTTCCCATTCGTATCAGAGTTCCAGACGCGGTTGCTCTTCAACCAGGCGTTCAGTAGAGGTCTCCAGATTTCAATGATTCTTGCTGGGAAGAAAGACGAATCATCACACTCTTGAAGTTTTTGTTGCTATTGTTAACCACAGTTAAATCTAGGCATTACTACTGATGAATGCACAAAGAAATCTTCTTATTGAATAGAGTTCAAAATCATAGATGTGTAAAAACATTTTGTAGCAAGTTTTAGATTTATTACATACTTGTACTTCATTCAGATGATTAATATTTAATTCATTAATACTCGTGGTTCTTGAAACATATCATCAGGCTTCGTATTTTTGTTTTTG</gDNA_template>
            <first_frame> S  R  R  S  I  T  N  H  R  Y  E  S   : R  *  L  F  *  R  S  F  Q  D  E  E  C  I  G  R  I  L  E  T  S  *  K  A  K  T  D  N  T  R  F  K  G  A  Y  F  Y  W  K  :  E  T  S  F  V  T  I  G  Q  R  I  L  A  N  P  L  R :   V  R  F  H  Y  G  H  P  D  I  F  D  R  I  F  H  V  T  R  G  G  I  S  K  A  S  K  T  I  N  L  S  E  D  I  F  S   : G  Y  N  S  T  L  R  G  G  F  V  T  H  H  E  Y  I  Q  V  G  K  G  R  D  V  G  M  N  Q  I  S  Q  F  E  A  K  V  A  N  G  N  G  E  Q  T  L  S  R  D  V  Y  R  L  G  R  R  F  D  F  Y  R  M  L  S  F  Y  F  T  T  V  G  F  Y  F  S  S  M  :  A  T  V  L  T  V  Y  V  F  L  Y  G  R  L  Y  M  V  L  S  G  L  E  K  R  I  L  E  D  P  T  V  R  Q  S  K  A  L  E  E  A  M  A  P  S  S  I  S  Q  L  G  L  L  L  V  L  P  M  V  M  E  I  G  L  E  R  G  F  R  T  A  L  G  D  F  V  I  M  Q  L  Q  L  A  S  V  F  F  T  F  Q  L  G  T  K  A  H  Y  Y  G  R  T  I  L  H  G  G  S  K  Y  R  A  T  G  R  G  F  V  V  F  H  A  K  Y  A  D  N  Y  R  M  Y  S  R  S  H  F  V  K  G  L  E  L  F  M  L  L  I  V  Y  E  V  Y  G  E  S  Y  R  E  S  Q  L  Y  L  F  V  T  I  S  I  W  F  L  V  G  S  W  L  F  A  P  F  V  F  N  P  S  G  F  D  W  Q  K  T  V  D  D  W  T  D  W  K  R  W  M  G  N  R  G  G  I  G  I  S  P  D  K  S  W  E  S  W  W  N  G  E  Q  E  H  L  K  H  T  N  L  R  G  R  V  I  D  I  I  L  A  F  R  F  F  I  F  Q  Y  G  I  V  Y  H  L  D  I  A  H  G  S  R  N  L  L  :  V  Y  G  L  S  W  F  V  M  L  T  A  L  L  V  L  K  :  M  V  S  M  G  R  R  R  F  G  T  D  F  Q  L  M  F  R  I  L  K  A  L  L  F  L  G  F  V  S  V  M  T  V  L  F  V  V  C  G  L  T  M  S  D  L  F  A  A  I  L  A  F  V  P  T  G  W  G  I  L  L  :  I  G  Q  A  C  R  P  C  F  K  G  L  G  I  W  D  S  V  M  E  L  A  R  A  Y  E  C  I  M  G  L  F  I  F  A  P  V  V  V  L  S  W  F  P  F  V  S  E  F  Q  T  R  L  L  F  N  Q  A  F  S  R  G  L  Q  I  S  M  I  L  A  G  K  K  D  E  S  S  H  S  *  S  F  C  C  Y  C  *  P  Q  L  N  L  G  I  T  T  D  E  C  T  K  K  S  S  Y  *  I  E  F  K  I  I  D  V  *  K  H  F  V  A  S  F  R  F  I  T  Y  L  Y  F  I  Q  M  I  N  I  *  F  I  N  T  R  G  S  *  N  I  S  S  G  F  V  F  L  F  L </first_frame>
            <second_frame>  R  G  E  A  L  Q  T  I  D  M  N  Q  :  D  N  Y  F  E  E  A  F  K  M  R  N  V  L  E  E  F  L  K  P  H  R  K  R  R  P  T  I  L  G  L  R  E  H  I  F  T  G  R :   R  P  V  L  *  P  S  D  K  E  F  *  Q  T  P  *   : G  *  D  F  I  M  V  I  L  I  F  S  T  E  S  F  M  *  Q  G  V  V  L  A  K  L  L  K  R  L  T  *  V  K  I  S  F  Q  :  V  I  I  Q  L  Y  V  E  D  S  *  H  I  M  S  T  S  K  *  G  R  V  V  M  W  G  *  I  R  S  L  N  L  R  Q  R  W  Q  M  E  M  E  N  K  H  *  V  V  M  S  I  G  L  G  V  D  L  I  S  T  G  C  C  R  S  T  S  P  Q  L  V  S  T  S  A  A  W :   L  Q  C  L  L  S  M  C  F  Y  M  D  G  Y  I  W  S  *  V  D  W  K  S  E  F  W  R  I  P  Q  F  V  S  P  K  L  L  K  R  L  W  L  P  H  L  Y  L  S  W  A  C  C  L  Y  S  L  W  *  W  K  L  G  W  R  E  D  F  A  R  P  W  V  I  L  *  *  C  S  C  S  L  L  L  Y  F  L  H  S  N  S  E  Q  K  H  I  I  T  V  E  L  S  C  M  E  V  L  N  I  E  L  L  V  V  A  L  L  F  F  M  Q  S  M  Q  I  T  T  G  C  I  L  A  V  T  L  S  R  G  L  S  C  L  C  C  *  L  S  M  K  S  M  G  N  H  I  V  N  H  S  Y  T  C  L  L  L  F  Q  F  G  S  W  *  V  P  G  C  L  L  P  L  C  S  I  R  L  V  S  T  G  K  R  Q  *  M  I  G  Q  I  G  R  G  G  W  E  I  V  E  A  L  G  F  H  R  I  K  V  G  N  L  G  G  M  G  S  R  N  I  *  N  T  Q  I  *  G  V  E  *  L  T  L  S  L  P  S  A  F  S  F  S  S  M  E  L  S  I  T  L  I  *  L  T  A  A  E  I  Y  W :   C  M  D  F  L  G  L  L  C  *  P  L  F  W  S  *  R :   W  Y  Q  W  A  D  E  D  L  G  L  I  F  S  S  C  S  E  F  *  K  H  F  Y  S  L  D  S  Y  L  S  *  L  C  Y  L  L  F  V  A  *  P  *  V  I  Y  L  L  P  F  L  P  S  Y  R  Q  A  G  A  F  F  L :   L  V  K  H  A  G  P  V  L  R  D  L  E  F  G  I  Q  *  W  S  W  H  G  H  T  N  A  S  W  V  C  S  Y  S  R  Q  L  W  S  C  L  G  S  H  S  Y  Q  S  S  R  R  G  C  S  S  T  R  R  S  V  E  V  S  R  F  Q  *  F  L  L  G  R  K  T  N  H  H  T  L  E  V  F  V  A  I  V  N  H  S  *  I  *  A  L  L  L  M  N  A  Q  R  N  L  L  I  E  *  S  S  K  S  *  M  C  K  N  I  L  *  Q  V  L  D  L  L  H  T  C  T  S  F  R  *  L  I  F  N  S  L  I  L  V  V  L  E  T  Y  H  Q  A  S  Y  F  C  F   </second_frame>
            <third_frame>   E  E  K  H  Y  K  P  *  I  *  I  K :   I  I  I  L  K  K  L  S  R  *  G  M  Y  W  K  N  S  *  N  L  I  E  S  E  D  R  Q  Y  *  V  *  G  S  I  F  L  L  E   : G  D  Q  F  C  N  H  R  T  K  N  F  S  K  P  L  E  :  G  K  I  S  L  W  S  S  *  Y  F  R  Q  N  L  S  C  N  K  G  W  Y  *  Q  S  F  *  N  D  *  P  E  *  R  Y  L  F  R :   L  *  F  N  F  T  W  R  I  R  N  T  S  *  V  H  P  S  R  E  G  S  *  C  G  D  E  S  D  L  S  I  *  G  K  G  G  K  W  K  W  R  T  N  T  E  S  *  C  L  *  A  W  A  S  I  *  F  L  Q  D  V  V  V  L  L  H  H  S  W  F  L  L  Q  Q  H   : G  Y  S  A  Y  C  L  C  V  S  I  W  T  V  I  Y  G  L  E  W  I  G  K  A  N  S  G  G  S  H  S  S  S  V  Q  S  S  *  R  G  Y  G  S  L  I  Y  I  S  A  G  L  V  A  C  T  P  Y  G  N  G  N  W  A  G  E  R  I  S  H  G  P  G  *  F  C  N  N  A  A  A  A  C  F  C  I  F  Y  I  P  T  R  N  K  S  T  L  L  R  *  N  Y  L  A  W  R  F  *  I  S  S  Y  W  S  W  L  C  C  F  S  C  K  V  C  R  *  L  Q  D  V  F  S  Q  S  L  C  Q  G  A  *  A  V  Y  A  V  N  C  L  *  S  L  W  G  I  I  S  *  I  T  V  I  L  V  C  Y  Y  F  N  L  V  L  G  R  F  L  V  V  C  S  L  C  V  Q  S  V  W  F  R  L  A  K  D  S  R  *  L  D  R  L  E  E  V  D  G  K  S  W  R  H  W  D  F  T  G  *  K  L  G  I  L  V  E  W  G  A  G  T  S  K  T  H  K  S  K  G  *  S  D  *  H  Y  P  C  L  P  L  F  H  F  P  V  W  N  C  L  S  P  *  Y  S  S  R  Q  Q  K  F  T   : G  V  W  T  F  L  V  C  Y  A  N  R  S  S  G  L  E   : D  G  I  N  G  Q  T  K  I  W  D  *  F  S  A  H  V  Q  N  S  E  S  T  S  I  P  W  I  R  I  C  H  D  C  V  I  C  C  L  W  P  D  H  E  *  S  I  C  C  H  S  C  L  R  T  D  R  L  G  H  S  S   : Y  W  S  S  M  Q  A  L  F  *  G  T  W  N  L  G  F  S  D  G  V  G  T  G  I  R  M  H  H  G  S  V  H  I  R  A  S  C  G  L  V  L  V  P  I  R  I  R  V  P  D  A  V  A  L  Q  P  G  V  Q  *  R  S  P  D  F  N  D  S  C  W  E  E  R  R  I  I  T  L  L  K  F  L  L  L  L  L  T  T  V  K  S  R  H  Y  Y  *  *  M  H  K  E  I  F  L  L  N  R  V  Q  N  H  R  C  V  K  T  F  C  S  K  F  *  I  Y  Y  I  L  V  L  H  S  D  D  *  Y  L  I  H  *  Y  S  W  F  L  K  H  I  I  R  L  R  I  F  V  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0116M01.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="41689" stop="41739"/>
                    <exon start="41852" stop="41901"/>
                    <exon start="44555" stop="44667"/>
                    <exon start="44739" stop="44968"/>
                    <exon start="45763" stop="46560"/>
                    <exon start="46652" stop="46702"/>
                    <exon start="47074" stop="47259"/>
                    <exon start="47928" stop="48167"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1716</number_coding_nucleotides>
                  <number_encoded_amino_acids>572</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KAKTDNTRFKGAYFYWKETSFVTIGQRILANPLRVRFHYGHPDIFDRIFHVTRGGISKASKTINLSEDIFSGYNSTLRGGFVTHHEYIQVGKGRDVGMNQISQFEAKVANGNGEQTLSRDVYRLGRRFDFYRMLSFYFTTVGFYFSSMATVLTVYVFLYGRLYMVLSGLEKRILEDPTVRQSKALEEAMAPSSISQLGLLLVLPMVMEIGLERGFRTALGDFVIMQLQLASVFFTFQLGTKAHYYGRTILHGGSKYRATGRGFVVFHAKYADNYRMYSRSHFVKGLELFMLLIVYEVYGESYRESQLYLFVTISIWFLVGSWLFAPFVFNPSGFDWQKTVDDWTDWKRWMGNRGGIGISPDKSWESWWNGEQEHLKHTNLRGRVIDIILAFRFFIFQYGIVYHLDIAHGSRNLLVYGLSWFVMLTALLVLKMVSMGRRRFGTDFQLMFRILKALLFLGFVSVMTVLFVVCGLTMSDLFAAILAFVPTGWGILLIGQACRPCFKGLGIWDSVMELARAYECIMGLFIFAPVVVLSWFPFVSEFQTRLLFNQAFSRGLQISMILAGKKDESSHS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="38067" e_stop="38071"/>
            <exon e_start="38155" e_stop="38318"/>
            <exon e_start="38469" e_stop="38592"/>
            <exon e_start="38737" e_stop="38840"/>
            <exon e_start="38964" e_stop="39057"/>
            <exon e_start="39163" e_stop="39268"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.922" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.990" e_score="0.988"/>
          <exon-intron don_prob="0.879" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.985" e_score="0.971"/>
          <exon-intron don_prob="0.982" acc_prob="0.952" e_score="0.989"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="38067" e_stop="38071" e_length="5"/>
          </exon>
          <intron i_serial="1" don_prob="0.922" acc_prob="0.988">
            <gDNA_intron_boundary i_start="38072" i_stop="38154" i_length="83"/>
          </intron>
          <exon e_serial="2" e_score="0.988">
            <gDNA_exon_boundary e_start="38155" e_stop="38318" e_length="164"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.990">
            <gDNA_intron_boundary i_start="38319" i_stop="38468" i_length="150"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="38469" e_stop="38592" e_length="124"/>
          </exon>
          <intron i_serial="3" don_prob="0.879" acc_prob="1.000">
            <gDNA_intron_boundary i_start="38593" i_stop="38736" i_length="144"/>
          </intron>
          <exon e_serial="4" e_score="0.971">
            <gDNA_exon_boundary e_start="38737" e_stop="38840" e_length="104"/>
          </exon>
          <intron i_serial="4" don_prob="0.988" acc_prob="0.985">
            <gDNA_intron_boundary i_start="38841" i_stop="38963" i_length="123"/>
          </intron>
          <exon e_serial="5" e_score="0.989">
            <gDNA_exon_boundary e_start="38964" e_stop="39057" e_length="94"/>
          </exon>
          <intron i_serial="5" don_prob="0.982" acc_prob="0.952">
            <gDNA_intron_boundary i_start="39058" i_stop="39162" i_length="105"/>
          </intron>
          <exon e_serial="6" e_score="0.981">
            <gDNA_exon_boundary e_start="39163" e_stop="39268" e_length="106"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38067" stop="38071"/>
              <exon start="38155" stop="38318"/>
              <exon start="38469" stop="38592"/>
              <exon start="38737" stop="38840"/>
              <exon start="38964" stop="39057"/>
              <exon start="39163" stop="39268"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E426412" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38067" stop="38071"/>
              <exon start="38155" stop="38318"/>
              <exon start="38469" stop="38592"/>
              <exon start="38737" stop="38840"/>
              <exon start="38964" stop="39057"/>
              <exon start="39163" stop="39264"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E456779" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTAAG : ATTCCAATAGCACTGGATATGGCAAAAGATTTCAGGGGAAAAGAAGATGCTGACCTGTTCCGGAAAATCAAAAGTGATGATTTTATGCGCTCTGCAGTGATCGAGTGCTATGAGACACTTAGATATTTGCTGGTTGGAATTCTGGAAGACAAAGATGACAAGAT : GGTTGTGGAGCAGATACGCAAAGAAATAGATGAAAGCATAAAAGAAAAAAGGTTCTTAAGGAAATTTCGGATGAGTGGGTTGCCCTTACTGAATGATAAATTGGAGAGATTCTTGAATCTTCTG : GTGGCAGATTATGAAGAGGAAGAGGCGAAAAGATCACCTATGATTAACCTTATCCAAGATATCATGGAAATTATCATTCAAGATGTTATGTTTGATGGCCATGA : AATTTTGGAGAGAGCTCACCAGATTGATAGAAAGGAGCAAAGATTTGAAAGGATAAATATCTATCTTACTCAGAACAGGTCTTGGAAGGAAAAG : GTTATCCGGCTTAATTTGTTATTGACTGTGAAAGAGTCTGCAATTAATGTTCCTACAAATTTGGATGCTCGCCGTCGAATTACTTTTTTCGCAAACTCCCTGTTTA</gDNA_template>
            <first_frame> V  R :   F  Q  *  H  W  I  W  Q  K  I  S  G  E  K  K  M  L  T  C  S  G  K  S  K  V  M  I  L  C  A  L  Q  *  S  S  A  M  R  H  L  D  I  C  W  L  E  F  W  K  T  K  M  T  R   : W  L  W  S  R  Y  A  K  K  *  M  K  A  *  K  K  K  G  S  *  G  N  F  G  *  V  G  C  P  Y  *  M  I  N  W  R  D  S  *  I  F  W :   W  Q  I  M  K  R  K  R  R  K  D  H  L  *  L  T  L  S  K  I  S  W  K  L  S  F  K  M  L  C  L  M  A  M   : K  F  W  R  E  L  T  R  L  I  E  R  S  K  D  L  K  G  *  I  S  I  L  L  R  T  G  L  G  R  K  R :   L  S  G  L  I  C  Y  *  L  *  K  S  L  Q  L  M  F  L  Q  I  W  M  L  A  V  E  L  L  F  S  Q  T  P  C  L </first_frame>
            <second_frame>  *   : D  S  N  S  T  G  Y  G  K  R  F  Q  G  K  R  R  C  *  P  V  P  E  N  Q  K  *  *  F  Y  A  L  C  S  D  R  V  L  *  D  T  *  I  F  A  G  W  N  S  G  R  Q  R  *  Q  D  :  G  C  G  A  D  T  Q  R  N  R  *  K  H  K  R  K  K  V  L  K  E  I  S  D  E  W  V  A  L  T  E  *  *  I  G  E  I  L  E  S  S   : G  G  R  L  *  R  G  R  G  E  K  I  T  Y  D  *  P  Y  P  R  Y  H  G  N  Y  H  S  R  C  Y  V  *  W  P  *  :  N  F  G  E  S  S  P  D  *  *  K  G  A  K  I  *  K  D  K  Y  L  S  Y  S  E  Q  V  L  E  G  K   : G  Y  P  A  *  F  V  I  D  C  E  R  V  C  N  *  C  S  Y  K  F  G  C  S  P  S  N  Y  F  F  R  K  L  P  V   </second_frame>
            <third_frame>   K  :  I  P  I  A  L  D  M  A  K  D  F  R  G  K  E  D  A  D  L  F  R  K  I  K  S  D  D  F  M  R  S  A  V  I  E  C  Y  E  T  L  R  Y  L  L  V  G  I  L  E  D  K  D  D  K  M :   V  V  E  Q  I  R  K  E  I  D  E  S  I  K  E  K  R  F  L  R  K  F  R  M  S  G  L  P  L  L  N  D  K  L  E  R  F  L  N  L  L  :  V  A  D  Y  E  E  E  E  A  K  R  S  P  M  I  N  L  I  Q  D  I  M  E  I  I  I  Q  D  V  M  F  D  G  H  E :   I  L  E  R  A  H  Q  I  D  R  K  E  Q  R  F  E  R  I  N  I  Y  L  T  Q  N  R  S  W  K  E  K  :  V  I  R  L  N  L  L  L  T  V  K  E  S  A  I  N  V  P  T  N  L  D  A  R  R  R  I  T  F  F  A  N  S  L  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0116M01.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="38069" stop="38071"/>
                    <exon start="38155" stop="38318"/>
                    <exon start="38469" stop="38592"/>
                    <exon start="38737" stop="38840"/>
                    <exon start="38964" stop="39057"/>
                    <exon start="39163" stop="39267"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>594</number_coding_nucleotides>
                  <number_encoded_amino_acids>198</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KIPIALDMAKDFRGKEDADLFRKIKSDDFMRSAVIECYETLRYLLVGILEDKDDKMVVEQIRKEIDESIKEKRFLRKFRMSGLPLLNDKLERFLNLLVADYEEEEAKRSPMINLIQDIMEIIIQDVMFDGHEILERAHQIDRKEQRFERINIYLTQNRSWKEKVIRLNLLLTVKESAINVPTNLDARRRITFFANSLF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="40987" e_stop="41112"/>
            <exon e_start="41186" e_stop="41297"/>
            <exon e_start="41438" e_stop="41557"/>
            <exon e_start="41624" e_stop="41739"/>
            <exon e_start="41818" e_stop="41901"/>
            <exon e_start="44555" e_stop="44600"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.722" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.926" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.847" e_score="1.000"/>
          <exon-intron don_prob="0.582" acc_prob="0.899" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="40987" e_stop="41112" e_length="126"/>
          </exon>
          <intron i_serial="1" don_prob="0.722" acc_prob="0.993">
            <gDNA_intron_boundary i_start="41113" i_stop="41185" i_length="73"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="41186" e_stop="41297" e_length="112"/>
          </exon>
          <intron i_serial="2" don_prob="0.926" acc_prob="0.991">
            <gDNA_intron_boundary i_start="41298" i_stop="41437" i_length="140"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="41438" e_stop="41557" e_length="120"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.847">
            <gDNA_intron_boundary i_start="41558" i_stop="41623" i_length="66"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="41624" e_stop="41739" e_length="116"/>
          </exon>
          <intron i_serial="4" don_prob="0.582" acc_prob="0.899">
            <gDNA_intron_boundary i_start="41740" i_stop="41817" i_length="78"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="41818" e_stop="41901" e_length="84"/>
          </exon>
          <intron i_serial="5" don_prob="0.989" acc_prob="0.996">
            <gDNA_intron_boundary i_start="41902" i_stop="44554" i_length="2653"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="44555" e_stop="44600" e_length="46"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40987" stop="41112"/>
              <exon start="41186" stop="41297"/>
              <exon start="41438" stop="41557"/>
              <exon start="41624" stop="41739"/>
              <exon start="41818" stop="41901"/>
              <exon start="44555" stop="44600"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316522" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGCACAGGCATTGGCTGATCTGAAGTTCACATATGTAGTGTCCTGTCAGATCTATGGTGCTCAGAAGAAGTCCAGTGAACAGCGAGACCGTAGTTGTTATGTCAATATTCTGAATCTCATGTTGAC : GTATCCATCTTTACGGGTTGCTTACATAGATGAGCGGGATGAAGCTATTAATGGGAAGTCCGAGAAGGTTTACTACTCTGTGCTGGTGAAGGGAGGTGATAAATTGGATGAG : GAAATATACCGTATCAAGCTTCCTGGCCCGCCTAAAATTGGGGAAGGGAAACCTGAAAATCAAAATCATGCCATCATTTTTACTCGAGGAGAAGCATTACAAACCATAGATATGAATCAA : GATAATTATTTTGAAGAAGCTTTCAAGATGAGGAATGTATTGGAAGAATTCTTGAAACCTCATAGAAAGCGAAGACCGACAATACTAGGTTTAAGGGAGCATATTTTTACTGGAAG : TGTCTCTTCGCTTGCTTGGTTCATGTCCAATCAGGAGACCAGTTTTGTAACCATCGGACAAAGAATTTTAGCAAACCCCTTGAG : GGTAAGATTTCATTATGGTCATCCTGATATTTTCGACAGAATCTTT</gDNA_template>
            <first_frame> C  T  G  I  G  *  S  E  V  H  I  C  S  V  L  S  D  L  W  C  S  E  E  V  Q  *  T  A  R  P  *  L  L  C  Q  Y  S  E  S  H  V  D  :  V  S  I  F  T  G  C  L  H  R  *  A  G  *  S  Y  *  W  E  V  R  E  G  L  L  L  C  A  G  E  G  R  *  *  I  G  *   : G  N  I  P  Y  Q  A  S  W  P  A  *  N  W  G  R  E  T  *  K  S  K  S  C  H  H  F  Y  S  R  R  S  I  T  N  H  R  Y  E  S   : R  *  L  F  *  R  S  F  Q  D  E  E  C  I  G  R  I  L  E  T  S  *  K  A  K  T  D  N  T  R  F  K  G  A  Y  F  Y  W  K  :  C  L  F  A  C  L  V  H  V  Q  S  G  D  Q  F  C  N  H  R  T  K  N  F  S  K  P  L  E  :  G  K  I  S  L  W  S  S  *  Y  F  R  Q  N  L  </first_frame>
            <second_frame>  A  Q  A  L  A  D  L  K  F  T  Y  V  V  S  C  Q  I  Y  G  A  Q  K  K  S  S  E  Q  R  D  R  S  C  Y  V  N  I  L  N  L  M  L  T :   Y  P  S  L  R  V  A  Y  I  D  E  R  D  E  A  I  N  G  K  S  E  K  V  Y  Y  S  V  L  V  K  G  G  D  K  L  D  E  :  E  I  Y  R  I  K  L  P  G  P  P  K  I  G  E  G  K  P  E  N  Q  N  H  A  I  I  F  T  R  G  E  A  L  Q  T  I  D  M  N  Q  :  D  N  Y  F  E  E  A  F  K  M  R  N  V  L  E  E  F  L  K  P  H  R  K  R  R  P  T  I  L  G  L  R  E  H  I  F  T  G  S :   V  S  S  L  A  W  F  M  S  N  Q  E  T  S  F  V  T  I  G  Q  R  I  L  A  N  P  L  R :   V  R  F  H  Y  G  H  P  D  I  F  D  R  I  F </second_frame>
            <third_frame>   H  R  H  W  L  I  *  S  S  H  M  *  C  P  V  R  S  M  V  L  R  R  S  P  V  N  S  E  T  V  V  V  M  S  I  F  *  I  S  C  *   : R  I  H  L  Y  G  L  L  T  *  M  S  G  M  K  L  L  M  G  S  P  R  R  F  T  T  L  C  W  *  R  E  V  I  N  W  M  R :   K  Y  T  V  S  S  F  L  A  R  L  K  L  G  K  G  N  L  K  I  K  I  M  P  S  F  L  L  E  E  K  H  Y  K  P  *  I  *  I  K :   I  I  I  L  K  K  L  S  R  *  G  M  Y  W  K  N  S  *  N  L  I  E  S  E  D  R  Q  Y  *  V  *  G  S  I  F  L  L  E   : V  S  L  R  L  L  G  S  C  P  I  R  R  P  V  L  *  P  S  D  K  E  F  *  Q  T  P  *   : G  *  D  F  I  M  V  I  L  I  F  S  T  E  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0116M01.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="40988" stop="41112"/>
                    <exon start="41186" stop="41297"/>
                    <exon start="41438" stop="41557"/>
                    <exon start="41624" stop="41739"/>
                    <exon start="41818" stop="41901"/>
                    <exon start="44555" stop="44600"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>603</number_coding_nucleotides>
                  <number_encoded_amino_acids>201</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AQALADLKFTYVVSCQIYGAQKKSSEQRDRSCYVNILNLMLTYPSLRVAYIDERDEAINGKSEKVYYSVLVKGGDKLDEEIYRIKLPGPPKIGEGKPENQNHAIIFTRGEALQTIDMNQDNYFEEAFKMRNVLEEFLKPHRKRRPTILGLREHIFTGSVSSLAWFMSNQETSFVTIGQRILANPLRVRFHYGHPDIFDRIF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="29037" e_stop="29086"/>
            <exon e_start="29571" e_stop="29705"/>
            <exon e_start="29783" e_stop="29859"/>
            <exon e_start="29939" e_stop="29975"/>
            <exon e_start="48227" e_stop="48365"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.987" acc_prob="0.959" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.961" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="29037" e_stop="29086" e_length="50"/>
          </exon>
          <intron i_serial="1" don_prob="0.987" acc_prob="0.959">
            <gDNA_intron_boundary i_start="29087" i_stop="29570" i_length="484"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="29571" e_stop="29705" e_length="135"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.961">
            <gDNA_intron_boundary i_start="29706" i_stop="29782" i_length="77"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="29783" e_stop="29859" e_length="77"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.994">
            <gDNA_intron_boundary i_start="29860" i_stop="29938" i_length="79"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="29939" e_stop="29975" e_length="37"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="29976" i_stop="48226" i_length="18251"/>
          </intron>
          <exon e_serial="5" e_score="0.986">
            <gDNA_exon_boundary e_start="48227" e_stop="48365" e_length="139"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29037" stop="29086"/>
              <exon start="29571" stop="29705"/>
              <exon start="29783" stop="29859"/>
              <exon start="29939" stop="29975"/>
              <exon start="48227" stop="48365"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343399" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTCAAATATACGATTCATGCCAGAATGCCTTTGCTATATCTTCCACAAT : ATGGCACATGAGATGCATGGAATACTATTTGGCAATGTACTTCCAGTCAGTGGAGGTGCATATCAACCAGTGTCCCATGGTGAGGAGTCTTTCCTGCGGGATGTTGTGACCCCTATTTATCAAGTCATTCAGAAG : GAATCTAGCAGAAACCTGAATGGGACAGCAAGCCATTCATCATGGAGAAATTATGATGATCTGAATGAATACTTTTG : GTCAGATAAATGTTTTAAGCTGGGTTGGCCAATGGAC : AAAGAAATCTTCTTATTGAATAGAGTTCAAAATCATAGATGTGTAAAAACATTTTGTAGCAAGTTTTAGATTTATTACATACTTGTACTTCATTCAGATGATTAATATTTAATTCATTAATACTCGTGGTTCTTGAAAC</gDNA_template>
            <first_frame> L  Q  I  Y  D  S  C  Q  N  A  F  A  I  S  S  T  I :   W  H  M  R  C  M  E  Y  Y  L  A  M  Y  F  Q  S  V  E  V  H  I  N  Q  C  P  M  V  R  S  L  S  C  G  M  L  *  P  L  F  I  K  S  F  R  R :   N  L  A  E  T  *  M  G  Q  Q  A  I  H  H  G  E  I  M  M  I  *  M  N  T  F   : G  Q  I  N  V  L  S  W  V  G  Q  W  T :   K  K  S  S  Y  *  I  E  F  K  I  I  D  V  *  K  H  F  V  A  S  F  R  F  I  T  Y  L  Y  F  I  Q  M  I  N  I  *  F  I  N  T  R  G  S  *  N </first_frame>
            <second_frame>  F  K  Y  T  I  H  A  R  M  P  L  L  Y  L  P  Q   : Y  G  T  *  D  A  W  N  T  I  W  Q  C  T  S  S  Q  W  R  C  I  S  T  S  V  P  W  *  G  V  F  P  A  G  C  C  D  P  Y  L  S  S  H  S  E   : G  I  *  Q  K  P  E  W  D  S  K  P  F  I  M  E  K  L  *  *  S  E  *  I  L  L  :  V  R  *  M  F  *  A  G  L  A  N  G   : Q  R  N  L  L  I  E  *  S  S  K  S  *  M  C  K  N  I  L  *  Q  V  L  D  L  L  H  T  C  T  S  F  R  *  L  I  F  N  S  L  I  L  V  V  L  E   </second_frame>
            <third_frame>   S  N  I  R  F  M  P  E  C  L  C  Y  I  F  H  N  :  M  A  H  E  M  H  G  I  L  F  G  N  V  L  P  V  S  G  G  A  Y  Q  P  V  S  H  G  E  E  S  F  L  R  D  V  V  T  P  I  Y  Q  V  I  Q  K  :  E  S  S  R  N  L  N  G  T  A  S  H  S  S  W  R  N  Y  D  D  L  N  E  Y  F  W :   S  D  K  C  F  K  L  G  W  P  M  D  :  K  E  I  F  L  L  N  R  V  Q  N  H  R  C  V  K  T  F  C  S  K  F  *  I  Y  Y  I  L  V  L  H  S  D  D  *  Y  L  I  H  *  Y  S  W  F  L  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0116M01.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29039" stop="29086"/>
                    <exon start="29571" stop="29705"/>
                    <exon start="29783" stop="29859"/>
                    <exon start="29939" stop="29975"/>
                    <exon start="48227" stop="48295"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>363</number_coding_nucleotides>
                  <number_encoded_amino_acids>121</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SNIRFMPECLCYIFHNMAHEMHGILFGNVLPVSGGAYQPVSHGEESFLRDVVTPIYQVIQKESSRNLNGTASHSSWRNYDDLNEYFWSDKCFKLGWPMDKEIFLLNRVQNHRCVKTFCSKF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="46560" PGL_stop="45253"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="46560" e_stop="46095"/>
            <exon e_start="45297" e_stop="45253"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.129" e_score="0.955"/>
          <exon-only e_score="0.578"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.955">
            <gDNA_exon_boundary e_start="46560" e_stop="46095" e_length="466"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.129">
            <gDNA_intron_boundary i_start="46094" i_stop="45298" i_length="797"/>
          </intron>
          <exon e_serial="2" e_score="0.578">
            <gDNA_exon_boundary e_start="45297" e_stop="45253" e_length="45"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46560" stop="46095"/>
              <exon start="45297" stop="45253"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E455763" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAGTAAATTTCTGCTGCCGTGAGCTATATCAAGGTGATAGACAATTCCATACTGGAAAATGAAAAAGCGGAAGGCAAGGATAATGTCAATCACTCTACCCCTTAGATTTGTGTGTTTTAGATGTTCCTGCTCCCCATTCCACCAAGATTCCCAACTTTTATCCGGTGAAATCCCAATGCCTCCACGATTTCCCATCCACCTCTTCCAATCTGTCCAATCATCTACTGTCTTTTGCCAGTCGAAACCAGACGGATTGAACACAAAGGGAGCAAACAACCAGGAACCTACCAAGAACCAAATTGAAATAGTAACAAACAAGTATAACTGTGATTCACGATATGATTCCCCATAGACTTCATAGACAATTAACAGCATAAACAGCTCAAGCCCCTTGACAAAGTGACTGCGAGAATACATCCTGTAGTTATCTGCATACTTTGCATGAAAAACAACAAAGCCACGACCA : AAACAAAAAATGCAATGAGAATGAGGTTTCACATCTATACTATGT</gDNA_template>
            <first_frame> Q  *  I  S  A  A  V  S  Y  I  K  V  I  D  N  S  I  L  E  N  E  K  A  E  G  K  D  N  V  N  H  S  T  P  *  I  C  V  F  *  M  F  L  L  P  I  P  P  R  F  P  T  F  I  R  *  N  P  N  A  S  T  I  S  H  P  P  L  P  I  C  P  I  I  Y  C  L  L  P  V  E  T  R  R  I  E  H  K  G  S  K  Q  P  G  T  Y  Q  E  P  N  *  N  S  N  K  Q  V  *  L  *  F  T  I  *  F  P  I  D  F  I  D  N  *  Q  H  K  Q  L  K  P  L  D  K  V  T  A  R  I  H  P  V  V  I  C  I  L  C  M  K  N  N  K  A  T  T   : K  T  K  N  A  M  R  M  R  F  H  I  Y  T  M  </first_frame>
            <second_frame>  S  K  F  L  L  P  *  A  I  S  R  *  *  T  I  P  Y  W  K  M  K  K  R  K  A  R  I  M  S  I  T  L  P  L  R  F  V  C  F  R  C  S  C  S  P  F  H  Q  D  S  Q  L  L  S  G  E  I  P  M  P  P  R  F  P  I  H  L  F  Q  S  V  Q  S  S  T  V  F  C  Q  S  K  P  D  G  L  N  T  K  G  A  N  N  Q  E  P  T  K  N  Q  I  E  I  V  T  N  K  Y  N  C  D  S  R  Y  D  S  P  *  T  S  *  T  I  N  S  I  N  S  S  S  P  L  T  K  *  L  R  E  Y  I  L  *  L  S  A  Y  F  A  *  K  T  T  K  P  R  P  :  K  Q  K  M  Q  *  E  *  G  F  T  S  I  L  C </second_frame>
            <third_frame>   V  N  F  C  C  R  E  L  Y  Q  G  D  R  Q  F  H  T  G  K  *  K  S  G  R  Q  G  *  C  Q  S  L  Y  P  L  D  L  C  V  L  D  V  P  A  P  H  S  T  K  I  P  N  F  Y  P  V  K  S  Q  C  L  H  D  F  P  S  T  S  S  N  L  S  N  H  L  L  S  F  A  S  R  N  Q  T  D  *  T  Q  R  E  Q  T  T  R  N  L  P  R  T  K  L  K  *  *  Q  T  S  I  T  V  I  H  D  M  I  P  H  R  L  H  R  Q  L  T  A  *  T  A  Q  A  P  *  Q  S  D  C  E  N  T  S  C  S  Y  L  H  T  L  H  E  K  Q  Q  S  H  D  Q :   N  K  K  C  N  E  N  E  V  S  H  L  Y  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0116M01.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="46520" stop="46209"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>309</number_coding_nucleotides>
                  <number_encoded_amino_acids>103</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TIPYWKMKKRKARIMSITLPLRFVCFRCSCSPFHQDSQLLSGEIPMPPRFPIHLFQSVQSSTVFCQSKPDGLNTKGANNQEPTKNQIEIVTNKYNCDSRYDSP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="59720" PGL_stop="56404"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="59720" e_stop="59353"/>
            <exon e_start="59240" e_stop="59079"/>
            <exon e_start="58453" e_stop="58305"/>
            <exon e_start="58218" e_stop="57790"/>
            <exon e_start="56424" e_stop="56404"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.979" acc_prob="0.672" e_score="1.000"/>
          <exon-intron don_prob="0.916" acc_prob="0.923" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.963" e_score="0.991"/>
          <exon-only e_score="0.667"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="59720" e_stop="59353" e_length="368"/>
          </exon>
          <intron i_serial="1" don_prob="0.979" acc_prob="0.672">
            <gDNA_intron_boundary i_start="59352" i_stop="59241" i_length="112"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="59240" e_stop="59079" e_length="162"/>
          </exon>
          <intron i_serial="2" don_prob="0.916" acc_prob="0.923">
            <gDNA_intron_boundary i_start="59078" i_stop="58454" i_length="625"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="58453" e_stop="58305" e_length="149"/>
          </exon>
          <intron i_serial="3" don_prob="0.991" acc_prob="0.998">
            <gDNA_intron_boundary i_start="58304" i_stop="58219" i_length="86"/>
          </intron>
          <exon e_serial="4" e_score="0.991">
            <gDNA_exon_boundary e_start="58218" e_stop="57790" e_length="429"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.963">
            <gDNA_intron_boundary i_start="57789" i_stop="56425" i_length="1365"/>
          </intron>
          <exon e_serial="5" e_score="0.667">
            <gDNA_exon_boundary e_start="56424" e_stop="56404" e_length="21"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59720" stop="59353"/>
              <exon start="59240" stop="59079"/>
              <exon start="58453" stop="58383"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375999" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59720" stop="59353"/>
              <exon start="59240" stop="59153"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324396" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59715" stop="59353"/>
              <exon start="59240" stop="59167"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E323708" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58426" stop="58305"/>
              <exon start="58218" stop="57790"/>
              <exon start="56424" stop="56404"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375998" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAAAGTTAGCATTTCACTTTGGCTTTTTTGCAGAATCGATGATGATTAAGGCTTCTTAGAAAGGAAATATTTATTTTTCGTTGTTCAATTGGTCATTGCAGTTAAACAGAAAAACATAATGTACCTGAAGAGCTTAACAAGTTAAGTTCAAGAAGTTTTTTGCTGGTGTTGTCTCTCTTTTCCAGCTCTGTTCCTTCAAAACAGAGTTTTTAAGCATTAGCCATATAGGATTGAGTAGTAGCAACATGATACAGAAGGTGATTCTTCATGTCGCGATTTTCATTGTTGTTCTTCTGCCAGTAGCTACAGCAACTCAGTTGCACACGAAAAAGACTATTCACGAATGCAGTGACCACAAAGTCCTTGAG : CCAAGTCCAAAGTTGTCATTTCAAATTGTTCTACATGGAATTCTCCTCTGGACTTCCATGGGGTTCTTGATGCCTATCGCGATTCTTGTAATAAGAATGTCGAATAAAGAGCAAAATGGAAGAAGGCTAAAGATGATTGTGTACACTCATGCTTTTTTACAG : ATACTATCTGTTCTCCTCGTAGCAGTAGCAACAATTATGTCAGTAATAAACTTTGAGAATTTTTTCGACAATACTCACCAGAGACTTGGCTTAGCTCTATATGTTGCCATATGGCTGCCATTCATCGCTGGGATTTTTCGACCTGACAG : GGGAAGCAAAAATAGGGGTGTATGGTATGCATTTCACTGGCTTATTGGAGTCACAGTTACTTTACTGGGAATCGTCAACCTATATATAGGTTTACAAGCATATAACACGAAAACAATGAAAAACACAAGTGTTTGGAACTGGCTTTTCAGTATTGAGGTTGGTGTTATCGCGTTCATCTATCTGTTCCAAGAAAAATGGCAATATATAAAGCAATCAGGAGGGATTTTAAGCAATGAATCAGTACGACCAACGGATCAAGAAGCATCTCCAACTCAGAAAAAAGAAATATCACCCATGGCATAATCAGAGTCATGTTAAGACTTCAGACAAACAAATAATTTTGCCTTTAACTAACATAAATTTTCTTCTTTTTTTTACAGCTAACATTAGATTCTTTCCAATTTTATTACAATTTCACAAAACAGATA : GAAAACAGAAGAGAATCAAAA</gDNA_template>
            <first_frame> *  S  *  H  F  T  L  A  F  L  Q  N  R  *  *  L  R  L  L  R  K  E  I  F  I  F  R  C  S  I  G  H  C  S  *  T  E  K  H  N  V  P  E  E  L  N  K  L  S  S  R  S  F  L  L  V  L  S  L  F  S  S  S  V  P  S  K  Q  S  F  *  A  L  A  I  *  D  *  V  V  A  T  *  Y  R  R  *  F  F  M  S  R  F  S  L  L  F  F  C  Q  *  L  Q  Q  L  S  C  T  R  K  R  L  F  T  N  A  V  T  T  K  S  L  S :   Q  V  Q  S  C  H  F  K  L  F  Y  M  E  F  S  S  G  L  P  W  G  S  *  C  L  S  R  F  L  *  *  E  C  R  I  K  S  K  M  E  E  G  *  R  *  L  C  T  L  M  L  F  Y  R :   Y  Y  L  F  S  S  *  Q  *  Q  Q  L  C  Q  *  *  T  L  R  I  F  S  T  I  L  T  R  D  L  A  *  L  Y  M  L  P  Y  G  C  H  S  S  L  G  F  F  D  L  T   : G  E  A  K  I  G  V  Y  G  M  H  F  T  G  L  L  E  S  Q  L  L  Y  W  E  S  S  T  Y  I  *  V  Y  K  H  I  T  R  K  Q  *  K  T  Q  V  F  G  T  G  F  S  V  L  R  L  V  L  S  R  S  S  I  C  S  K  K  N  G  N  I  *  S  N  Q  E  G  F  *  A  M  N  Q  Y  D  Q  R  I  K  K  H  L  Q  L  R  K  K  K  Y  H  P  W  H  N  Q  S  H  V  K  T  S  D  K  Q  I  I  L  P  L  T  N  I  N  F  L  L  F  F  T  A  N  I  R  F  F  P  I  L  L  Q  F  H  K  T  D   : R  K  Q  K  R  I  K  </first_frame>
            <second_frame>  K  V  S  I  S  L  W  L  F  C  R  I  D  D  D  *  G  F  L  E  R  K  Y  L  F  F  V  V  Q  L  V  I  A  V  K  Q  K  N  I  M  Y  L  K  S  L  T  S  *  V  Q  E  V  F  C  W  C  C  L  S  F  P  A  L  F  L  Q  N  R  V  F  K  H  *  P  Y  R  I  E  *  *  Q  H  D  T  E  G  D  S  S  C  R  D  F  H  C  C  S  S  A  S  S  Y  S  N  S  V  A  H  E  K  D  Y  S  R  M  Q  *  P  Q  S  P  *   : A  K  S  K  V  V  I  S  N  C  S  T  W  N  S  P  L  D  F  H  G  V  L  D  A  Y  R  D  S  C  N  K  N  V  E  *  R  A  K  W  K  K  A  K  D  D  C  V  H  S  C  F  F  T   : D  T  I  C  S  P  R  S  S  S  N  N  Y  V  S  N  K  L  *  E  F  F  R  Q  Y  S  P  E  T  W  L  S  S  I  C  C  H  M  A  A  I  H  R  W  D  F  S  T  *  Q  :  G  K  Q  K  *  G  C  M  V  C  I  S  L  A  Y  W  S  H  S  Y  F  T  G  N  R  Q  P  I  Y  R  F  T  S  I  *  H  E  N  N  E  K  H  K  C  L  E  L  A  F  Q  Y  *  G  W  C  Y  R  V  H  L  S  V  P  R  K  M  A  I  Y  K  A  I  R  R  D  F  K  Q  *  I  S  T  T  N  G  S  R  S  I  S  N  S  E  K  R  N  I  T  H  G  I  I  R  V  M  L  R  L  Q  T  N  K  *  F  C  L  *  L  T  *  I  F  F  F  F  L  Q  L  T  L  D  S  F  Q  F  Y  Y  N  F  T  K  Q  I  :  E  N  R  R  E  S  K </second_frame>
            <third_frame>   K  L  A  F  H  F  G  F  F  A  E  S  M  M  I  K  A  S  *  K  G  N  I  Y  F  S  L  F  N  W  S  L  Q  L  N  R  K  T  *  C  T  *  R  A  *  Q  V  K  F  K  K  F  F  A  G  V  V  S  L  F  Q  L  C  S  F  K  T  E  F  L  S  I  S  H  I  G  L  S  S  S  N  M  I  Q  K  V  I  L  H  V  A  I  F  I  V  V  L  L  P  V  A  T  A  T  Q  L  H  T  K  K  T  I  H  E  C  S  D  H  K  V  L  E  :  P  S  P  K  L  S  F  Q  I  V  L  H  G  I  L  L  W  T  S  M  G  F  L  M  P  I  A  I  L  V  I  R  M  S  N  K  E  Q  N  G  R  R  L  K  M  I  V  Y  T  H  A  F  L  Q  :  I  L  S  V  L  L  V  A  V  A  T  I  M  S  V  I  N  F  E  N  F  F  D  N  T  H  Q  R  L  G  L  A  L  Y  V  A  I  W  L  P  F  I  A  G  I  F  R  P  D  R :   G  S  K  N  R  G  V  W  Y  A  F  H  W  L  I  G  V  T  V  T  L  L  G  I  V  N  L  Y  I  G  L  Q  A  Y  N  T  K  T  M  K  N  T  S  V  W  N  W  L  F  S  I  E  V  G  V  I  A  F  I  Y  L  F  Q  E  K  W  Q  Y  I  K  Q  S  G  G  I  L  S  N  E  S  V  R  P  T  D  Q  E  A  S  P  T  Q  K  K  E  I  S  P  M  A  *  S  E  S  C  *  D  F  R  Q  T  N  N  F  A  F  N  *  H  K  F  S  S  F  F  Y  S  *  H  *  I  L  S  N  F  I  T  I  S  Q  N  R  * :   K  T  E  E  N  Q   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0116M01.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="59583" stop="59353"/>
                    <exon start="59240" stop="59079"/>
                    <exon start="58453" stop="58305"/>
                    <exon start="58218" stop="57915"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>843</number_coding_nucleotides>
                  <number_encoded_amino_acids>281</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QVKFKKFFAGVVSLFQLCSFKTEFLSISHIGLSSSNMIQKVILHVAIFIVVLLPVATATQLHTKKTIHECSDHKVLEPSPKLSFQIVLHGILLWTSMGFLMPIAILVIRMSNKEQNGRRLKMIVYTHAFLQILSVLLVAVATIMSVINFENFFDNTHQRLGLALYVAIWLPFIAGIFRPDRGSKNRGVWYAFHWLIGVTVTLLGIVNLYIGLQAYNTKTMKNTSVWNWLFSIEVGVIAFIYLFQEKWQYIKQSGGILSNESVRPTDQEASPTQKKEISPMA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="63843" PGL_stop="68181"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="63843" e_stop="64663"/>
            <exon e_start="64973" e_stop="65263"/>
            <exon e_start="65585" e_stop="65724"/>
            <exon e_start="67892" e_stop="67997"/>
            <exon e_start="68089" e_stop="68181"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.971" acc_prob="0.913" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.965" e_score="0.997"/>
          <exon-intron don_prob="0.995" acc_prob="0.885" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.949" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="63843" e_stop="64663" e_length="821"/>
          </exon>
          <intron i_serial="1" don_prob="0.971" acc_prob="0.913">
            <gDNA_intron_boundary i_start="64664" i_stop="64972" i_length="309"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="64973" e_stop="65263" e_length="291"/>
          </exon>
          <intron i_serial="2" don_prob="0.992" acc_prob="0.965">
            <gDNA_intron_boundary i_start="65264" i_stop="65584" i_length="321"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="65585" e_stop="65724" e_length="140"/>
          </exon>
          <intron i_serial="3" don_prob="0.995" acc_prob="0.885">
            <gDNA_intron_boundary i_start="65725" i_stop="67891" i_length="2167"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="67892" e_stop="67997" e_length="106"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.949">
            <gDNA_intron_boundary i_start="67998" i_stop="68088" i_length="91"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="68089" e_stop="68181" e_length="93"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63843" stop="64594"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E737543" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63844" stop="64497"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E579370" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64576" stop="64663"/>
              <exon start="64973" stop="65263"/>
              <exon start="65585" stop="65724"/>
              <exon start="67892" stop="67924"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301700" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65029" stop="65263"/>
              <exon start="65585" stop="65724"/>
              <exon start="67892" stop="67997"/>
              <exon start="68089" stop="68181"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207466" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTTGATCGGAAATTAAACTCAACCTACAAATCCTCCGATGGCGGCAGTCACTGTGGCCGCAGAATGGCAGCTCCTTTACAATCGCTACTACCGGAAACCTGAAATTTACCTGATGCAATGGAAGCACGTCGACCTCACGCGTAACAAAGTCGCCTGCGCTCCTTTCGGTGGTCCAATCGCTGTCATACGTGACGATGCTAAGATCGTCCAGCTTTACGCTGAATCTGCCCTTCGTAAGCTTAGAATTTTCAATTCCGCTGGTGTTCAGATCTCTGAAACAGTATGGAAGAATCCTGGCGGTCGACTTATCGGTATGTCATGGACTGATGATCAAATTCTAGTTTGTATTACTCAGGATGGTACTGTTTATCGTTATAACATACATGCCGAGCCTATTGAACCGAATTCTCAGCTTACGTTAGGTGCGGACTGTTTTACTCATAGTGTAGTTGAGTGTGTTTTCTGGGGGAATGGTGTTGTTTGTATCAATGAGGCGTTTCAGGTTTATTGTATACCTGATTTCAATAATCCAAAACCTGTCAAATTGGCGGATACTGGTTTGGAGGATTTTCCTTTATGTATGGCTGTGATTGAACCGCAGTATACTATGTCTGGCAATGTGGAGGTACTGATGGGGGTTGCTGATCATGTGCTGTTGGTGGAAGAGGATGGCGTTCAGGAGGTTGGACTTGGAATTGGGCCTCTACAGAAAATGGTGGTTTCCCGGAATGGGAAGCTTTTGGCATCTTTTACACATGATGGAAGGCTTCTTGTTATGTCCACGGACTTCTCCAGTGTCATTTTCGAGTATCCTTGTGAG : TCAGCCTTACCCCCTGAGCAGCTAGCTTGGTGTGGAATGGACAGTGTACTACTTTACTGGGATGATATGCTTCTGATGGTGGGTCCTTATGGAGACCCTGTACGCTACTTTTATGATGAACCAGTTCTCCTTATCCCTGAATGTGATGGCGTTAGAATACTCTCCAATATGAGTATGGAATTTCTTCATCGAGTTCCAGATTCAACTGTCTCCATATTTCAGATTGGTAGCACACTACCTGCAGCTTTGCTTTATGATGCCTTAGATCATTTTGACAGGCGGAGTGCCAAG : GCTGATGAGAATCTGAGACTAATACGGTCTTCGCTGCCCGAGGCGGTTGAAGCATGTATTGATGCAGCAGGTCATGAATTTGACGTCTCACAGCAGCGGACGCTTTTAAGAGCAGCAAGCTACGGCCAAGCCTTTTGCAG : CCATTTTCAACGGGACCGCATTCAAGAGATGAGTAAAACTTTACGAGTATTAAATGCTGTACGTCACCCAGATATTGGCATTCCTCTCAGTATTCAACAGTATAAG : TCGCTTACACCTGCTGTTCTGATTGCTCGTCTTATTAATGCTCATCGCCACCTTCTTGCACTACAAATATCAGAATATCTTAGTATGAATCAG</gDNA_template>
            <first_frame> L  *  S  E  I  K  L  N  L  Q  I  L  R  W  R  Q  S  L  W  P  Q  N  G  S  S  F  T  I  A  T  T  G  N  L  K  F  T  *  C  N  G  S  T  S  T  S  R  V  T  K  S  P  A  L  L  S  V  V  Q  S  L  S  Y  V  T  M  L  R  S  S  S  F  T  L  N  L  P  F  V  S  L  E  F  S  I  P  L  V  F  R  S  L  K  Q  Y  G  R  I  L  A  V  D  L  S  V  C  H  G  L  M  I  K  F  *  F  V  L  L  R  M  V  L  F  I  V  I  T  Y  M  P  S  L  L  N  R  I  L  S  L  R  *  V  R  T  V  L  L  I  V  *  L  S  V  F  S  G  G  M  V  L  F  V  S  M  R  R  F  R  F  I  V  Y  L  I  S  I  I  Q  N  L  S  N  W  R  I  L  V  W  R  I  F  L  Y  V  W  L  *  L  N  R  S  I  L  C  L  A  M  W  R  Y  *  W  G  L  L  I  M  C  C  W  W  K  R  M  A  F  R  R  L  D  L  E  L  G  L  Y  R  K  W  W  F  P  G  M  G  S  F  W  H  L  L  H  M  M  E  G  F  L  L  C  P  R  T  S  P  V  S  F  S  S  I  L  V  S :   Q  P  Y  P  L  S  S  *  L  G  V  E  W  T  V  Y  Y  F  T  G  M  I  C  F  *  W  W  V  L  M  E  T  L  Y  A  T  F  M  M  N  Q  F  S  L  S  L  N  V  M  A  L  E  Y  S  P  I  *  V  W  N  F  F  I  E  F  Q  I  Q  L  S  P  Y  F  R  L  V  A  H  Y  L  Q  L  C  F  M  M  P  *  I  I  L  T  G  G  V  P  R :   L  M  R  I  *  D  *  Y  G  L  R  C  P  R  R  L  K  H  V  L  M  Q  Q  V  M  N  L  T  S  H  S  S  G  R  F  *  E  Q  Q  A  T  A  K  P  F  A   : A  I  F  N  G  T  A  F  K  R  *  V  K  L  Y  E  Y  *  M  L  Y  V  T  Q  I  L  A  F  L  S  V  F  N  S  I  S :   R  L  H  L  L  F  *  L  L  V  L  L  M  L  I  A  T  F  L  H  Y  K  Y  Q  N  I  L  V  *  I   </first_frame>
            <second_frame>  F  D  R  K  L  N  S  T  Y  K  S  S  D  G  G  S  H  C  G  R  R  M  A  A  P  L  Q  S  L  L  P  E  T  *  N  L  P  D  A  M  E  A  R  R  P  H  A  *  Q  S  R  L  R  S  F  R  W  S  N  R  C  H  T  *  R  C  *  D  R  P  A  L  R  *  I  C  P  S  *  A  *  N  F  Q  F  R  W  C  S  D  L  *  N  S  M  E  E  S  W  R  S  T  Y  R  Y  V  M  D  *  *  S  N  S  S  L  Y  Y  S  G  W  Y  C  L  S  L  *  H  T  C  R  A  Y  *  T  E  F  S  A  Y  V  R  C  G  L  F  Y  S  *  C  S  *  V  C  F  L  G  E  W  C  C  L  Y  Q  *  G  V  S  G  L  L  Y  T  *  F  Q  *  S  K  T  C  Q  I  G  G  Y  W  F  G  G  F  S  F  M  Y  G  C  D  *  T  A  V  Y  Y  V  W  Q  C  G  G  T  D  G  G  C  *  S  C  A  V  G  G  R  G  W  R  S  G  G  W  T  W  N  W  A  S  T  E  N  G  G  F  P  E  W  E  A  F  G  I  F  Y  T  *  W  K  A  S  C  Y  V  H  G  L  L  Q  C  H  F  R  V  S  L  *   : V  S  L  T  P  *  A  A  S  L  V  W  N  G  Q  C  T  T  L  L  G  *  Y  A  S  D  G  G  S  L  W  R  P  C  T  L  L  L  *  *  T  S  S  P  Y  P  *  M  *  W  R  *  N  T  L  Q  Y  E  Y  G  I  S  S  S  S  S  R  F  N  C  L  H  I  S  D  W  *  H  T  T  C  S  F  A  L  *  C  L  R  S  F  *  Q  A  E  C  Q   : G  *  *  E  S  E  T  N  T  V  F  A  A  R  G  G  *  S  M  Y  *  C  S  R  S  *  I  *  R  L  T  A  A  D  A  F  K  S  S  K  L  R  P  S  L  L  Q  :  P  F  S  T  G  P  H  S  R  D  E  *  N  F  T  S  I  K  C  C  T  S  P  R  Y  W  H  S  S  Q  Y  S  T  V  *   : V  A  Y  T  C  C  S  D  C  S  S  Y  *  C  S  S  P  P  S  C  T  T  N  I  R  I  S  *  Y  E  S  </second_frame>
            <third_frame>   L  I  G  N  *  T  Q  P  T  N  P  P  M  A  A  V  T  V  A  A  E  W  Q  L  L  Y  N  R  Y  Y  R  K  P  E  I  Y  L  M  Q  W  K  H  V  D  L  T  R  N  K  V  A  C  A  P  F  G  G  P  I  A  V  I  R  D  D  A  K  I  V  Q  L  Y  A  E  S  A  L  R  K  L  R  I  F  N  S  A  G  V  Q  I  S  E  T  V  W  K  N  P  G  G  R  L  I  G  M  S  W  T  D  D  Q  I  L  V  C  I  T  Q  D  G  T  V  Y  R  Y  N  I  H  A  E  P  I  E  P  N  S  Q  L  T  L  G  A  D  C  F  T  H  S  V  V  E  C  V  F  W  G  N  G  V  V  C  I  N  E  A  F  Q  V  Y  C  I  P  D  F  N  N  P  K  P  V  K  L  A  D  T  G  L  E  D  F  P  L  C  M  A  V  I  E  P  Q  Y  T  M  S  G  N  V  E  V  L  M  G  V  A  D  H  V  L  L  V  E  E  D  G  V  Q  E  V  G  L  G  I  G  P  L  Q  K  M  V  V  S  R  N  G  K  L  L  A  S  F  T  H  D  G  R  L  L  V  M  S  T  D  F  S  S  V  I  F  E  Y  P  C  E  :  S  A  L  P  P  E  Q  L  A  W  C  G  M  D  S  V  L  L  Y  W  D  D  M  L  L  M  V  G  P  Y  G  D  P  V  R  Y  F  Y  D  E  P  V  L  L  I  P  E  C  D  G  V  R  I  L  S  N  M  S  M  E  F  L  H  R  V  P  D  S  T  V  S  I  F  Q  I  G  S  T  L  P  A  A  L  L  Y  D  A  L  D  H  F  D  R  R  S  A  K  :  A  D  E  N  L  R  L  I  R  S  S  L  P  E  A  V  E  A  C  I  D  A  A  G  H  E  F  D  V  S  Q  Q  R  T  L  L  R  A  A  S  Y  G  Q  A  F  C  S :   H  F  Q  R  D  R  I  Q  E  M  S  K  T  L  R  V  L  N  A  V  R  H  P  D  I  G  I  P  L  S  I  Q  Q  Y  K  :  S  L  T  P  A  V  L  I  A  R  L  I  N  A  H  R  H  L  L  A  L  Q  I  S  E  Y  L  S  M  N  Q </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0116M01.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="63860" stop="64663"/>
                    <exon start="64973" stop="65263"/>
                    <exon start="65585" stop="65724"/>
                    <exon start="67892" stop="67997"/>
                    <exon start="68089" stop="68181"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1434</number_coding_nucleotides>
                  <number_encoded_amino_acids>478</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TQPTNPPMAAVTVAAEWQLLYNRYYRKPEIYLMQWKHVDLTRNKVACAPFGGPIAVIRDDAKIVQLYAESALRKLRIFNSAGVQISETVWKNPGGRLIGMSWTDDQILVCITQDGTVYRYNIHAEPIEPNSQLTLGADCFTHSVVECVFWGNGVVCINEAFQVYCIPDFNNPKPVKLADTGLEDFPLCMAVIEPQYTMSGNVEVLMGVADHVLLVEEDGVQEVGLGIGPLQKMVVSRNGKLLASFTHDGRLLVMSTDFSSVIFEYPCESALPPEQLAWCGMDSVLLYWDDMLLMVGPYGDPVRYFYDEPVLLIPECDGVRILSNMSMEFLHRVPDSTVSIFQIGSTLPAALLYDALDHFDRRSAKADENLRLIRSSLPEAVEACIDAAGHEFDVSQQRTLLRAASYGQAFCSHFQRDRIQEMSKTLRVLNAVRHPDIGIPLSIQQYKSLTPAVLIARLINAHRHLLALQISEYLSMNQ</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 55 chains have been computed
$ 
$ memory statistics:
$ 189032 bytes spliced alignments in total
$ 37 spliced alignments have been stored
$ 5108 bytes was the average size of a spliced alignment
$ 12888 bytes predicted gene locations in total
$ 6 predicted gene locations have been stored
$ 2148 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 65 backtrace matrices have been allocated
$ 
$ date finished: 2008-03-26 22:21:24
-->
