<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2008-03-07 04:33:17"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C07HBa0184E04-z8xSb/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/cxgn-bacpublish-resources-QPbVQW/lycopersicum_combined_unigene_seqs" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QPbVQW/lycopersicum_combined_unigene_seqs" ref_id="SGN-U316923" ref_strand="+" ref_description="SGN-U316923        Tomato 200607 #1 [24 ESTs aligned] arabidopsis/peptide: | Symbol: None | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein, contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 | chr5:22484716-22485489 FORWARD | Aliases: MTE17.16, MTE17_16(evalue: 5e-15, score=77.8) genbank/nr: gi|18423748|ref|NP_568824.1| protease inhibitor/seed storage/lipid transfer protein (LTP) family [Arabidopsis thaliana] gi|9758177|dbj|BAB08562.1| gene_id:MTE17.16~unknown protein [Arabidopsis thaliana] gi|17529112|gb|AAL38766.1| unknown protein [Arabidopsis thaliana] gi|20259131|gb|AAM14281.1| unknown protein [Arabidopsis thaliana] gi|21593786|gb|AAM65753.1| unknown [Arabidopsis thaliana](evalue: 3e-13, score=77.8)">
      <seq>caaaatggctaaatcatatagtacaatgatttttttgctttttgcactgattatcacagtacaaattgcaacaataaatgctgcagaaacaccagaagttatttgcaaggtcacaatcaatgaccttatgctatgtttacctgcagtaatggggaagagacctccgaaaccgacgccggattgttgcgcagtgctacgcaaggctgatttacagtgtatgtgcaaccagaaatctgagttggggaaatttggaatcagtcctgaagctgcaatgaatctgcctaagcaatgtaaaattaaggttcccgatggatgttaacatctgcgtacactctattctctccaatttctacttgtgggattttagtgcgtatgctagagaagtgttgggactaattaagaaaaaagagcatgtatttttacctgattttgttttgaattgtttcgcttcactttgtgaagtttgacattttttttttttatgtgcgtttgtaatttctggtatttgagaatttaaataaactttctttgagtaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaggggggggggggggggggccccccccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184E04-z8xSb/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0184E04.1" temp_strand="+" temp_description="C07HBa0184E04.1  AC212637.1 htgs_phase:1 submitted_to_sgn_as:gi|158262132|gb|AC212637.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0184E04, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="7847" stop="76556"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8147" g_stop="8681" g_length="535"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="535" r_length="535" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8682" i_stop="12930" i_length="4249">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12931" g_stop="12958" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="536" r_stop="563" r_length="28" r_score="0.857"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12959" i_stop="13144" i_length="186">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="13145" g_stop="13167" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="564" r_stop="586" r_length="23" r_score="0.739"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="13168" i_stop="17180" i_length="4013">
            <donor d_prob="0.567" d_score="0.00"/>
            <acceptor a_prob="0.828" a_score="0.68"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17181" g_stop="17221" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="587" r_stop="627" r_length="41" r_score="0.683"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="17222" i_stop="18140" i_length="919">
            <donor d_prob="0.472" d_score="0.68"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18141" g_stop="18173" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="628" r_stop="660" r_length="33" r_score="0.545"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184E04.1" gen_strand="+" ref_id="SGN-U316923" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>660</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184E04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U316923" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8147" e_stop="8681"/>
          <exon e_start="12931" e_stop="12958"/>
          <exon e_start="13145" e_stop="13167"/>
          <exon e_start="17181" e_stop="17221"/>
          <exon e_start="18141" e_stop="18173"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATGGCTAAATCATATAGTACAATGATTTTTTTGCTTTTTGCACTGATTATCACAGTACAAATTGCAACAATAAATGCTGCAGAAACACCAGAAGTTATTTGCAAGGTCACAATCAATGACCTTATGCTATGTTTACCTGCAGTAATGGGGAAGAGACCTCCGAAACCGACGCCGGATTGTTGCGCAGTGCTACGCAAGGCTGATTTACAGTGTATGTGCAACCAGAAATCTGAGTTGGGGAAATTTGGAATCAGTCCTGAAGCTGCAATGAATCTGCCTAAGCAATGTAAAATTAAGGTTCCCGATGGATGTTAACATCTGCGTACACTCTATTCTCTCCAATTTCTACTTGTGGGATTTTAGTGCGTATGCTAGAGAAGTGTTGGGACTAATTAAGAAAAAAGAGCATGTATTTTTACCTGATTTTGTTTTGAATTGTTTCGCTTCACTTTGTGAAGTTTGACATTTTTTTTTTTTATGTGCGTTTGTAATTTCTGGTATTTGAGAATTTAAATAAACTTTCTTTGAGTTGTTGGGGTTCGGTTATTCGTTAATGTATTTTTTCTTACACGCACCAACTATAATAATTGTGCCTCGATCCCTAGTAAGTTGGGAATGTTAGGGATTTATGGGTTCGGACGAATTCACTGGCTTTTTCGTATAGATCCTATGTTGAGTTAGAAAATTATTTTTTTTAAATGTATATTAACTTATGAACCTTAAATAAATCAATTTAGATTCTTCAAACTCTTAATCTTGACTCCGACAACTATATGATTCTCATTGTCAGTTAAGCTTGTCTTGAGTTTCTACATCTGCTATTTAGAAATGATATAGTCTCTTTATATAGTATGGACTGTTACGTTGTGGAGCTTGATTAATATTTGATGTACTGTCATATATTAATGTTCATATATTTATTCTCCATTTATTCTCTGTAACCTAAAATACTCTCATTTATTAATATATATATCCACCGCCGTGGAAGTTTACTCACGGAGTGTTACCACGAAACATTGATTTCTCTCTTTCTCTCTCATCTCTTTCTCTCTAAAGTTCTTGTGTTCTTCATTCGTTAAGTGTGTGGGGAATTCGATCCTAACATGGACAATCATTATCTTAAGAGCTCGTTCTTGAGATTGAGTTGAATTAAATTTTTAATTTCTTTATCAATTTCGATCTTATATAACAAAGTATGTTGTATAGTGTGGAAACATCATGAAAAAGTACGTTGTATAGGTGATGCTTCATCGCAAATTGACTAATTTTATACGAACCGATAAGGCGATTACCGTGTGTATATCCTCTTTTATTCAAGCTGAAGATCGGTAATATGAGCCTTGTTTGTTGACATTGAATCGTCATTCAAATGGAAGCCCAACTCATCATGGGCCCAATGGGCTTTATGAGAAGTTGAAAACCCACTTTGAAAATTGATAAAACTATTAGAACATGTAGGAAAAATAACTTAAATACACAACTATAATTTTTATATTCTCCAATTTTTCCTACTTTTTTTAAATATTACATAATTTTCTTTTTTTTTATTTTATTGTAAGTTTTTAGATACATTACATTCTCTCTCTTATAATACACATTTACCCATTTTAATGCCTATTTTTTCTCCATTAAAACACTCAACCTCTTAAATCAGTTTTTTAATTTTAAATTTTATCCATTTAAACACTCAACTTTTTAATCAGCTTTTTGATTTTGAATTTTTAAATTTTTAAATTTAATTAATTTTAATTAAAAGACCAAATTTTGAAATTTTGAATTTCAAAATTTGAAAAATTTGAAAATTAAAAAAGTAAAAATATTAGGAAGCAGGACAACTTCCATTAACTTCTACCGTCTTCTTCTTACTCCATCAAGTTTCAGTTCTTTTTTTTTCCTTAATCATCTTCATTCATCTTAATCCATTACATTTTTTTCTTTTCTTCTTTTTATTCTTAATCCATCATCGTCTATTTCTTCCTAATCTGTAATAGTTTGAACCCAGCATCTTTTTATTATTAATCCATCATCAATTCGTATATTCTTCTCTTTTTTATTTTTGTTAATTGTTCTATTACATCATAGTAATGGATCCGTTAATTAATAGAAGGATATATGATTCCGACGATGAAAATTGGAAAGAAAATAGAAAAAAGTCTTTGCATGATTCTATGAATCTTCAGAAGGATTCAAACGAAAACTCTGGCGAAACATCGAATCAAAGGTTGTCAAAATACAACAAAAAAAGGAAAAAAGAAGCAACAAACATTATTGTTAAGCCTACCTTGTCTCGGGTTAGTATTTTGGCAAAACGAAATGATACATATATATCAAACACACACTAAAAATAACTGATACATTGGCTAAACCGTATGTATCATGTACAATATGTTACCCTATAATCCTTAAATTTTACATGATATTTAGGTAATTGAATAGCATATTCATATGAATTGGTATTATTTTTTAAAAGTAAAGTTATTTACTGTATATTTCAAGAAAAGCATAACAAAAAAAGCATTACACAAGTTAAATTATATAAATTCACATCATACATGATTTATAGTCATTGTAAAGTACACAATAACCTCAATAATATTTTTGTATTTTTTATCTAATGGAGATGTATCATTGTGCAAACCAATGATACACACTAAAAAGTACATGATACATTAGATAAACAATGTGTACCAAAAACACACAATAAAAGTACATGATACACTAGATAAACCATATGTATCATGTACATTATGTTACCTAATGATTCTTAAATTTATGTATCTTACTGTAGCATAAGATTTATAAAATTTTATATTTAAAACAAATATTGACACAAGTATATTTATCAACACCAATAATAACAAAGTATTTATAATCAAAAGCACGACTTCAATATTTAATTACCACATGTTTGTAAGTTTATTTATCTAAACACAAAGTGTTCAATTTGCAGTTGTAATGAAAACTGAAATTCATTAAAATGTTTACGTTATAAATTATTCTTGATATCATAGAAACATTACGACTAATTCACTTCTCTTTTGGGTAGAAAGTACAAGTTCTTCTGTTGTGCCCTTCTTGTCCACATTGTCCACAACAGTTTGTGTTCAAAATCTTTTCATTTGCATTCTTTCTTCTTCTTTTTCTTGGTCGTCCAGATGATATAATCTTTGATATTTAGGTAAATTGAATAGCATATTCAAAATAGATGATATAATCTTTGATTTTCAAATTTTAAAATTAATATCCAATTAAGTGCTGATTTAATGCAAATTAATGATCTGTTACCACAAATTAAGCTGTTTTAGTAACAACATTAACTTTACCGTTTTTCTCCCCTATTTTTTCTTAACAGTTTTAAATTACCATGTATCACTACAGTCTAAAGTATCACGGCTCAACAAATTTAAGAGATTTTTTGTAATTAGTAAACTTATCGGGACAGAATGTAATTATTGAATTACACTATGGGATTCCTTATATTTATACGAACATATATTATTGGCTGATTTATGCAAATATTCCTTTTATACCCCTTTAGATTTTATTCTTATTTAAAAAAAATTCCAGTATATAACCTTCGAGATCGACAAAACATTATATTATCGTCTAACATTTTAAAAAAATTCAGAATATCATCTAACGTTTTCTCATAGAATTTTCAATTTAAGCAAATAAAATTCTTATGTCAATAGACTAAATAGCCGTCCAAAAAAGCGAAAATTTTGTCTACTATTTTAAACGTTCATTTAAAACTTGACTTTAGAACGAATATTCCAAAATCAAGAAGTCAAGTCTTCATTGGTATTATATGGTAGTATTTATTATATAGTAGTAATTAAATTATAGTGAATATGATTTGACCAATAGAAAAAAAAAACAAGAGATACAATAATACTAGGAAGTAATTGACAAGATAACAAAAAAGTTGCAAAAGGCATAAATTGAATGTGTAATAAATTACATCATCGTGCAAACAACTACAACGTCTTTTTTTTTTTAAACAATTCTTAAGGCCACACAAACGCGTACTGTTGATATGACCTTTTCTTTCGTTTCAGTTCGATATTTGATATCTGTTTTGAGTTTCCACTAATTTAAATTTGTATCATGTAAGACTTATTTAAAAAAATAACGTGTTCTATTGAAATATTTTTAATGCTCAAACTTAATCTTGAGATTTATTATTAAAAATGAAAAATTTTATTCATTTCACTACAATTCGGTGCGATTATATTAGTGATATATTCTAACGGCAACTTGATGTTCAAAAATTTTTGGGCCTTTTTTTTTTGGTTTGGATTTGGAAAGATCAAAATTGGGGATTGGATTTAATGCACAATTCTCTCTCTCTCTATATATATATATATTTTTTATTTGTTCAGATTAAAATATTAAAAGATAATTTATCACTTAGCTCCTAATATTATAATTTATTAAATTTATTATATTTAAATTGTAACATGCTAAAAGGGACAAAAGAAGCAGTTGATTCTTTTGTTTAGCGAGATTGACCGAAAAAGTGACAACTTCACTTTAAGAATTTCGTTTCATAATTTTCATAAAGAAACAATAAAGTAGACTTTTAATTAGTTAATGAGACCTCATAATAATAAAATTTTTCTTAAACTTAACTTTCATATATTTAATTTTTGTAGACTTTTTAAGAGACTTTCCTATTTAATTTAGTTTAGTTGAGTTTCAATTTTGAAAATTTTCTTTCAGAAAGCACGCATTTAAAAAGTTAATCAAAAAATTTAAAATAAATATCGAATATTTGATTAAAAACAAAAACAAAAATAAAAACAAAAATTTAATTTTATCTGATTACTCTCTTAGGATTTTTATAATAAGAAATGAAATATCTAAAATAACAAGATATAAGTTATACGCGTTATGCAATTGTCGATCTGTATTTAATTCTTATTTTGTATCCAACAATACATTTGTTACTTTGCTAGTGATAATATATATATCTTGATCAAGTCTTTGGACTCAATAAAAAGAAATACACAAAAACGTACATATATTATGTAGAAATATTGTTCACGTCACTTTTCAGTCTTTTTCTTAAAAAATAATAATTAATATCGTAGAGTTTTAAATTTTACTAATAAAACATGATAACAATGACTATTTTTCGATTATAATGATTTAAAAGTTTAATTTGTAAATTTTATTCAATTATTAGAGAGCCGTCTCTCCAATTTGCTAATTCGTGGCCATGTGCGGCCATATGCCTTATTAGTTCCCACCTAGGAACTTTCTTATAAAATAAATTAATTTTGTGACATTTTTTTATTTTAGTGTCATTGTAACTACTTATAATTAAGTTAATAAACATATAATATGATTTTATGGTTTTCGAATTTAATGTATAATATGAGATAAGCTCTTGCATCATATTTTTATCGGGGTTTGGTATTTATATTGAAACTCTAATTGAATTTAGGTCGCACATTGCTTGACTTATTCAAAAATGAAGGTTTTAATCATTTTTCTCCATACCTAAGGTTCGAATCTGAAATCCTTAAAATACTTTCAATACTTTTACTTTATAATAATAATAATATGCTCACTATAATTCAGATAGTAATTAGAATTTATCACTAGCTAATTCGTTGCTAGCTAGTGTGTTGTTAATTAGAATTAGTGACATATTTAGCATAAGGTATCGATTTTTCTAAAAAAAAATTTATTATTATTATTTATAGAGAATTATATAATAAGGTTCAAGACAATGCTAAAATGACTATTTTAAGGCCCGTTTGGCCATAAATTTTCCAAATAATATTTGGGAAAAATTTGGCAAAATAATGTTTGTCCATACAATTTGTCATTATTTGGCAAATATTTTTGGCAAATATCCCAAATTTCCAAATACTAGTTTTTTCTAGTATTTGGGCCAAATACCATTATTTGGGATATTTTAAAAATAAAAATTTTACCTCAATCTTTTATTTTTTACAAAAACACCCTCTCTAGTAGTTGCTTGCGTTGTATTACATCATTTTTTTACGTGAACACCAAAATAGTGGTGAAATATTTAGTGAATATTAAATAATGATATGATTGTTGATGAAAATTATTAAAAATTGGCTCTAGGTAACAAAGTCATGTACTTTATCTACTTCACGATGTATAGAATAATTCTTGTTGCACTCACTCCAAATTACCACATTGCTTCAGTGTCATGGACATTATTTGTTATTATTGTAACTAACATTCAATTGACTTGTAATACAAACTTTTAGTTAGTTTTGATAGTTTTTAAAACTTGTGTGTATAAATCATATTTTTCTAAAAAGGTGAAATATATTTCCCAAATTTTATGGCCAAACACATGGTGAAATTTCACCCAAATTTTCACTCAAATAATATTTGCCAAGAATATTTGAAAATCTATGGCCAAACGCTAGCTAAGAGTTTTGTTTCAGAACATTTTTTTATTAAATAGAGATTAAGATAACTAATTATTTACTTTGATTCAAACTCTTGTTTGACTGTAAATTGAATAAAGAACATATTTACCACTAATAACTACTAAGATATGCTAATCCATAAGAGACAAGTGTTTCCGACTTCCTAAATCCAACAACCTTGCCAATTGCAAAAATATCATGATCGAGTCAGAAATTTTTTAATTATTTTTTTATAAATAAATTAAACAAATTCAATATTTACTAATAAAAATTTATATAATTAAAAAAAAATCAAATAAATCACTTGTGTATCTAGTCCAGTTTCCAAGTCCATAGATTAATTAAACTACAAAATTTTACAAAAATTCGTTAGATTTGTCTCGAGTTCACCAATTTATTTTAACTATTGTCCACATGCATTTTTTCAAATATTTTGTTTTGTACTAATAGACATAAATTATTATTAGAACTAAAATATCCTCTCTCTCTTTTTTTTTTTTTTACAAAAACATCTTAACTGGACTTGTCGATATTGGTGCATAATCTTTAGTATTTTAATTTTATGTTTATAAGTGACTTGGTGCCCACTATGTCATTTGTACAAAATACTATGCACGTAATTAGATAGAATTAGAATATAACTTTATGCTCCATCCATTAATAATAATCATATTTTAAAATATTATGTGATATTATATATCTATGGTTTAGATTAATAAAGTGATGAATTCATAATATTTTGTGCAAAATCTACTCACCAACCGTTGTACCCGTCAACAATATTCATTTTTTATTTTTAAAAAAATAATACAAAGTTGAGTCTTCTGACCGACCATTGCTTATTCAATAACCACAAAAAATAATTCTCAAAACTTATTTATTATTTTTATCTAGAGAAGTTAGATGAAACACTTTTTTTAAAAAAAGGATTACGATGAGCATCCATGGTAATGTTGAATAATAATTGGTCAACTCTATTTTATTTTGTTTTATTCTTAATTCTCATTAATTTTTTATATTCAAATCCGAAGTTTGAAACTTACACTAGCTAAGATCAATTTTTGGGATCACACTTATTTTTTTGAAAAAACAACCTATAAATCGAGTAGTTTATAATGATAAAAAAAAAATTAAATAGCTAAGATAATAAAAAAGCTATAAGTTTGATGACTATTTAAATAATTGATTAGTTTATCTTTTTCTAATAAAAAATATTTATTTTTTAAAGTGAAATTTCTTTAAGCAAACTCCAGAATATCGAAGACGGGATAGTAAACAAAAAAAAATTACAATGGAACTCTTCATTCACATATTATATAAATACTTGAATCATTGAAGTTTGTAAAGGCATATATATAGTAAGCATTTTTTTCCCCTTTTAGAGTAGCTAGTAGTGGTAGTACTTTTGCCTTTGGATCATAAATCATAATCACTTGGTATGGCAAATGTGGTGCAAACTTTCATTAAAGATATTTAAAGTTTATTTGCTTATTATGGATGATGTTGACACTACATGTTCATCTTAATTATAAATTGATCACTTTATATTATAGTATTAAGAAGTAGAACATATATTGTATATTTAGAGAATATGAGTGTAAGTTGTTAGTTTACTTTTAAGAATAAAAGTTCCATTATATACTTGACATTGAGATAATATTCTAATTTTTTTTATGTTTAGTTTATTTCACTGAAAAAATAGGAAAAACAAGTTCGATGAATTAATTTATGCCTCCGGCCACCCTAATTACCCCCATTGCTTTGCCCTAATCGACAATCATCTCTAACCCTGTGAGAATCTAAGATTTAAGCTTCTTGTATTCAATATTTAAGGTGTTTAAATTTAGTATATTATATTTTAAAAGTTATAAATTCACGAGCTACTAATTTGTACTTTGCATCAAAATACTAGGTTTAAGTGAGACTATAAGGTTGCTACATCCGCCTTTGACACCCTACCACGAGTCCTCGACTCCCGTCTCTCCGACTCCCCCAACCACCTTTCATCACCCCCCACACGACTACCTCTATTTTCATAGTGTTTACTTATCAGACATCGTTTTTATAGTTGAGATTCTTTCGAAATCAATTATAATATCTTCTCATATTAGAGAGAAAATTTGCGTATAATCTATCTTTTTCATATCTCGCTTATAAAAATTACAAGAAAATTATTTATGATTTATGTGAAACATTTTCTTAAGTATATGTTTCCATAAATAATATTTTAAATTGTACCAAAAATACCCTTAATGCAACCATACAACTAGAAGAATCAAGTTAAAGTTGTGTATTATTAGATTTGGCATATTCAAATTAAATGACTAAAATAGTGGCAAGTCACATCAAAGACTCCCCATTATAATTCTCTTCTTGCTGTATTATAGCTGTTGTTTTATGTTCATCATTTTTCCAAAATTGTGATTCTCATTAACTCATATCTTTAATGTCTTTAATTAATTGTTTGTTAATTTGTTATATCCTTGACTTTTTGAATAAATTGCATAGGCAAAAAAAATAATCACTCTCAAATACATGCATTCTACCAATAATGTAATTTACGTTAAGAATTAAGCAGTGAATTTTGAATATTATAAAATTAATTATATAGAAGAAGAAAGGGGACAAAAGAAAAAAAAAGCATAAACAAATGTTTGTCAATATATATTTGTTATTGAACTAGAATAATATATATATATAACTTATTTTTTAATTATTAACCAAATTAATATATAAATTTGTTGTATTAGCTGAATTGGTCAAATTAAAATACACAAAATCTTCAAAGAAATGTGCATGTCGAGACCCTAGGGGATTTATCATGATATCATTCATTGCGTGGTCTACATTTAGAAATTGTCAAAAAACATTATAATAAAAACTAGTCGGATATCAGCATGGATTGCGATGCAAAGTGAAATTATTTTAATTTTAATCAAAGACTATGAATTTAATTTTTGAGTTTAAAAAAATTTATTTTCAAAATGTTACAATTAAATAGACTCTAAACATAATTCAGACTTAATCGACGCTCTAATGCGAACTCCAAACATTGAAATGTTTTTTTGGATAATCTGAATTCACATGATTGATGGATTATATAATAGGAGAATTTTTGTTTGAACTAATACTCTATTTTATTATTATTTGGTCGTTAATTATCCAACTTCAATTTGGCATTTTTATCTCTTACCAATTTCCATTTGAATAAAAATTAATAAGAATTTTTTTTGAAAAAACTCGTAATTATATTATAATAATATATAATTTTGCGAGGTTTAAAAAGAGGATCATGTATGCCTCCTCTTTATTCATGCCTTAGGTAAATAAATAGACTAATTTTAATAGATCATCAATTTAAATAAATTATTTCAAAACACATTTAGAAATTTTAATTATGATTTCTGCTATGTTGTTTTACTTTCAGTTTCCAAAAATTTACTTCAATTAAATAGGTAAATATGAAAGACATCTACTATTTATGGTAATTATTATTTTTATCTAGAAAAAGCCAGGCATGTTATTTATAGATTATTTAATATACCTGGACCTCAGCTGAAACCCGAATTGGAAAAATGGATCGGGTCAGAAGTGGGTCCCACGA</genome_strand>
        <mrna_strand>CAAAATGGCTAAATCATATAGTACAATGATTTTTTTGCTTTTTGCACTGATTATCACAGTACAAATTGCAACAATAAATGCTGCAGAAACACCAGAAGTTATTTGCAAGGTCACAATCAATGACCTTATGCTATGTTTACCTGCAGTAATGGGGAAGAGACCTCCGAAACCGACGCCGGATTGTTGCGCAGTGCTACGCAAGGCTGATTTACAGTGTATGTGCAACCAGAAATCTGAGTTGGGGAAATTTGGAATCAGTCCTGAAGCTGCAATGAATCTGCCTAAGCAATGTAAAATTAAGGTTCCCGATGGATGTTAACATCTGCGTACACTCTATTCTCTCCAATTTCTACTTGTGGGATTTTAGTGCGTATGCTAGAGAAGTGTTGGGACTAATTAAGAAAAAAGAGCATGTATTTTTACCTGATTTTGTTTTGAATTGTTTCGCTTCACTTTGTGAAGTTTGACATTTTTTTTTTTTATGTGCGTTTGTAATTTCTGGTATTTGAGAATTTAAATAAACTTTCTTTGAGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAA..........................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAGGGGGGGGGGGGGGGGGGCCCCCCCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QPbVQW/lycopersicum_combined_unigene_seqs" ref_id="SGN-U314735" ref_strand="+" ref_description="SGN-U314735        Tomato 200607 #1 [45 ESTs aligned] arabidopsis/peptide: | Symbol: None | glycerophosphoryl diester phosphodiesterase family protein, contains Pfam PF03009 : Glycerophosphoryl diester phosphodiesterase family; similar to Glycerophosphoryl diester phosphodiesterase precursor (Glycerophosphodiester phosphodiesterase) (Surface-exposed lipoprotein D) (Protein D) (ImmunoglobulinD-binding protein) (IGD-binding protein) (SP:Q06282) {Haemophilus influenzae} | chr5:22491503-22495358 FORWARD | Aliases: MTE17.19, MTE17_19(evalue: 0, score=850) genbank/nr: putative(evalue: 0, score=1206)">
      <seq>aaaaatatttgccagcctgaaaatagcccacacccctcaaaggcaaggcacaaacactcacacactttctctctctatctatctgctctcaaagtctcctcaacttgtcaatcatcacactttttcttcacacaaatcagctgaatctctccatattctcctccacctccgtcactaacggaaaaaaatttacgccggaaaacgattctccggctgagctcgccggaaatgaggaaaatgcgttctgttttatgtctcctggtactttgttgctcagttgcatttgttgctgctcaaagatctaacaatgtaacctctaaatggaaaacactgagcggagatgcaccaaaagtcatagctcgtggaggattttctgggttacttcctgattcaagctttaatgcctacatgttggcacaagcaattagctcggctgattgggttgcttggtgtgatgttcaactcacaaaagacggggttggcatttgttttcctgatatcaagcttaacaatgcttctgacatcgatactctctacccaaacaggaataacaactactcggtgaatggaattcctcagacaggatggttttctatagatttcagcatcaaggatttggcacctgtcagcttgaaacaaggagtgtattcgcggtcgcctagatttgatggcactccccagcaaattcttactgtccaggatgtagctacccaagtcaaacctccaggattatggttgaatatccagcatgattccttctacagccagcacaatctgagtatgagaagctttgttgtttccctatctagaagtgttattgccaactatatttcatcacctgaggtgaatttcctgcgaagtatcgcatcgcgattgaatccacgagtgacaaagcgcgttttccggtttctcaacgaagatgatattgagccatcaacaagtcaaacatatggttctctagtgaagaatctcacatttgttaaaacctttgccgctgggattcttgttcccaaacactatatctggccaacggacagcagcttgtacttgcagccacatacatcggttgtttcggacgctcataaggaaggacttgagatttatgcagccgactttgttaatgatgtaccatttgcttataattatagctatgatcctgtagctgagtatttatcctttatagacaacggtgagttctcggtggacggagtgttatctgacttcccaatgtctccatctgcgtcagtagattgcttctcgcatttgggtgcgaatgataagcctcaagtaactcttcagattatcgcacctcaaggagcaagtggtgactatcctggttgtacagatttagcatatacaaaagctgcttccgatggtgcagatattattggctgtcctgtccaaatgacaaaagatggaatacccttctgccttagttcgataaatctgatagacacgacgactgcggcccaatcgccattcagcgacatcgctaccactgctccagagcttcagataacagatggaatactcaccatcaacctaaactggagcgatattcaaacgctgaaaccggtaatatcaacccggtattcagactttagattgtcacggaatccaaaggccagaaatgttggaaagtttatgtcgttagcagacttcttgacattttccaaaactgctaatgtttctggtataatgatcagcatagagaatgctgcatacctggcaaagcagggattaggtgtaactgatgcggttttggatgccctaagcacagctggttacaataatcagacagctaggaaagttatgatccaatcaaatgacagttctgttctggaagaattcaagaagagtagttatgaacttgtttatttggttgacgataatatcagtgatattaagaactcaactatattggagatcaagacctttgcaaaatctgttgtcataaccaagaaatcagtcttccccagtgaagacgcttttatcattggtcaaacgaatattgtgcagaagctgcagtcagcaaatctcccggtatatgtacgactatttaataacgagtttatatctcaagcatgggacttcttctcagattcgtctactgagataaacaactatgttcttggagctggtgttgatggtcttgttacagaataccctgggacagcggctagataccgaaggaaccgttgtttagcatacaaaaacttgccaccatatatgagccctgttcaacctgggagtctcctgggactcatgactgttcagtctatgccaccagtcgaacctcccagccccgtgctcgatgtaagtgatgtgactgagccaccacttccacctgttgcaaagataaacccaagtaacgacgatggttctacagctagagctcccactactcctccaaatggccaatcctcagttgttgctagcattctcatgagctcagttgcagttcttctagcaattttcatggtatattgatgaccatttctactttggtgccaccattttgtacaatttgttttgccatcttactgatcaaacctccctctggtgattatggagtcgcacatgatggcggcggtagtcagctcatttaacacatgattgtttccttgtatttgcgatgtatcaaaattttcagctcttgtttattctttacattcttcctcgtttctatttttcattccttccctcccctttttttttccattttgggtcagattgagtgggtgtctggggtttattgcctatttatttgtaagaattctgttttggatataagcaatgatcaatttagttagtatttttcaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184E04-z8xSb/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0184E04.1" temp_strand="+" temp_description="C07HBa0184E04.1  AC212637.1 htgs_phase:1 submitted_to_sgn_as:gi|158262132|gb|AC212637.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0184E04, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="19558" stop="27381"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19858" g_stop="20194" g_length="337"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="337" r_length="337" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20195" i_stop="21240" i_length="1046">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21241" g_stop="21534" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="338" r_stop="631" r_length="294" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="21535" i_stop="22643" i_length="1109">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.223" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="22644" g_stop="22759" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="632" r_stop="747" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="22760" i_stop="22946" i_length="187">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.737" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="22947" g_stop="23448" g_length="502"/>
          <reference_exon_boundary r_type="cDNA" r_start="748" r_stop="1249" r_length="502" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="23449" i_stop="23564" i_length="116">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="23565" g_stop="23603" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1250" r_stop="1288" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="23604" i_stop="24114" i_length="511">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="24115" g_stop="24399" g_length="285"/>
          <reference_exon_boundary r_type="cDNA" r_start="1289" r_stop="1573" r_length="285" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="24400" i_stop="24906" i_length="507">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="24907" g_stop="25046" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="1574" r_stop="1713" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="25047" i_stop="25711" i_length="665">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="25712" g_stop="26189" g_length="478"/>
          <reference_exon_boundary r_type="cDNA" r_start="1714" r_stop="2191" r_length="478" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="26190" i_stop="26444" i_length="255">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="26445" g_stop="27086" g_length="642"/>
          <reference_exon_boundary r_type="cDNA" r_start="2192" r_stop="2833" r_length="642" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184E04.1" gen_strand="+" ref_id="SGN-U314735" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>2833</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184E04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U314735" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19858" e_stop="20194"/>
          <exon e_start="21241" e_stop="21534"/>
          <exon e_start="22644" e_stop="22759"/>
          <exon e_start="22947" e_stop="23448"/>
          <exon e_start="23565" e_stop="23603"/>
          <exon e_start="24115" e_stop="24399"/>
          <exon e_start="24907" e_stop="25046"/>
          <exon e_start="25712" e_stop="26189"/>
          <exon e_start="26445" e_stop="27086"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAATATTTGCCAGCCTGAAAATAGCCCACACCCCTCAAAGGCAAGGCACAAACACTCACACACTTTCTCTCTCTATCTATCTGCTCTCAAAGTCTCCTCAACTTGTCAATCATCACACTTTTTCTTCACACAAATCAGCTGAATCTCTCCATATTCTCCTCCACCTCCGTCACTAACGGAAAAAAATTTACGCCGGAAAACGATTCTCCGGCTGAGCTCGCCGGAAATGAGGAAAATGCGTTCTGTTTTATGTCTCCTGGTACTTTGTTGCTCAGTTGCATTTGTTGCTGCTCAAAGATCTAACAATGTAACCTCTAAATGGAAAACACTGAGCGGTAACTTTTTTTTCTCTCTCTAAATTTCTACTTAATAAGTTAAAGAGTAAGCTTAAAATATCTCTCGAAGTTCAGATTAGCTATGAAGGAATTGAAGAGATCATGATAAGTTCTTCGGATGCGTTATATTTTGAGTTTTTTTTTTCAGCTACGAATTTGTTACAACAGTTGCTTGCTGAGTAGACTTCTGTATTTCAGAAAAATTAACAATGGAAGTTCAATTTAGCTATACGATACTGAAGAAATCGTGAAAAAAAGGTTTAGATTCTGTAGTTTAGAATAGTTTTGCCTATAATTTTGCTGGATAGTAACTGGAGCGGGAGAATTGTTAGGATGATTTGTTCGTTTGAAGTATTCTTCAGTGTTCAGGCGTTTGAGCTGTTTTATGTTGATTTTATTTTGTGAGATTTCTGATCAAGTTAGTTTAATTAGGGAAAAATCAAAAGCTGCATCTAGAATGTGATGGATAGTACCTGTTAATAGTAAGCTAGCTGCTCAGGAAGCAGTGATTTAACGGTTGCACTGGAGACATCTGCTTCTGTAATTCTATGTCAGTAATGGTTGTTAGTATGATGCTGGTGGTACCTGAAGTTGCAATAAAGAAACATCTTGAAAGAACATAAGTCATTGTTTTTCTGATTTTTGCAAAGTTAACTTTTGATTTTCAGTTGCTAGTCATTGCCACGGTCTTCTAGATTTTGGAGAAACATGCCAAGATGCTTTCAATTTTCAAAAGAAAAAAGAATGTTCTCTTTGCAACTGTCTTCTTATTTCCCACTGTAGTTGATGCAACACTTTGGCAGCAACTCATACCTAAATCACCTCCTCCAAGAAGGAAAAAAAGAGATAATGAAAAGAAGGAAAAGTTCCCTTGAGTAAGGGGTCAGAACTCCAGATAGGATTTCAACGGTGAATTAGTTAGCACTCCGTATTTGTTAAAATAGTCAGTAGAAGTGTTCTTTTCTTTGCCTATACGAGAAATTAATGAATAAGATTCTTTTGTTTCATTGTTGTATTTTGACTAAATCCATCTTTCTACTTTGCAGGAGATGCACCAAAAGTCATAGCTCGTGGAGGATTTTCTGGGTTACTTCCTGATTCAAGCTTTAATGCCTACATGTTGGCACAAGCAATTAGCTCGGCTGATTGGGTTGCTTGGTGTGATGTTCAACTCACAAAAGACGGGGTTGGCATTTGTTTTCCTGATATCAAGCTTAACAATGCTTCTGACATCGATACTCTCTACCCAAACAGGAATAACAACTACTCGGTGAATGGAATTCCTCAGACAGGATGGTTTTCTATAGATTTCAGCATCAAGGATTTGGCACCTGTCAGCTGTAAGATTAAATCGTGACCTTTTGTATCTTTTACTATATGCTTTTTATGGTCCTATATATGTGAATGGCTGTTTAGATCAGCAGTTACACCTAGTAAAGAACTTGTTTTGGGCAATGAGTTTACACTCCAAAGCGGCCTGTTTTACCTATCATATGTAATTGAGAGGCTTCTCCACTAGTTTTGTTTTACTTAATAAACCAATTGATTTCATGGATTTATTCATTTGGAATTATAAATGGTGCTTAGCTTCACTGTCTTTGTTTTGCCATTCATTTGCTGATCTGTGAAGGTGGTACAGTCACTGCTCTCTTTTCTTTTAATGCGGGACAGCCCAGGTTCTGGTGCCATACCATTATAGTGTGTCTAAAGCCATTATGTATCTGTATTTATTTGGTTCTAAAACAATTCTGATATGTTGGGACTGCGTTTATCATTTCTTTTACATACTTATGCTTCGAGAAGGGTTGATAGATGAAAAACTTAACCTAGGTTTTCATTTTGTGGAATAACTGTAGTCCTATCTTTTAAAAGTTTGACTCTCAGATCAAGTGCTAATTGGCAGTAAATCTGCATACTAATATGCTAGTATTGTTTGTATCTCTCTTTGTCCCAATTTGTATGACTTACTTTTTAGTCGGTCCCAAAAAGAATGACACATTTCTATATTAAGTAATAATTTAACTTTAAAATATCTATTTTTTTCTTAATGAAATGAAAAATAGCTAAACAAATTTCTATTTTTCATTTTAGACCACAAGTTTCGAAAGTCATCCTTTCTTTCTTAAACTTTGTGCTGAGTCAAACTACCTCACATAAAATGGGACGGAGGGAGAAATATATTTTGTCATAAAAAATTTTCTCCTCCCTCAACCACTATCTTATTTTATGTTTTTAAAAAATGTAGAATCAGATCACCTTAGAAAATGAGTTGCCCTGTGCATTTCCTTAGGACCCAAATAGATCATATATGCTTATGCCAAAACATGTTGCTGGTATAGTCTAGAGAATCTCTCATTAGAGTTGGACTTATTGTTATGGCTTGATGAAAGTTAGCCTCTGGTGATCTGAAATTCTACTAAAAAGAGATTAATCCTGATGCCTGGAACAGTGAAACAAGGAGTGTATTCGCGGTCGCCTAGATTTGATGGCACTCCCCAGCAAATTCTTACTGTCCAGGATGTAGCTACCCAAGTCAAACCTCCAGGATTATGGTTGAATATCCAGGTATGCATTTGGTTACAGTATGCTTTTGGTACTTACTTGTTGCCTACTTTCAGTTTTTCAATCTCTAAGAATCTAAGAGGAACAGTTTAATTATCATACCATGCGTTGCTGCATTTGATGTGTGGTATGTTAAGTTTGTGTAGGCCTAACAATTATTTAACTCATTCTTCTGTAAATACATTTCCAGCATGATTCCTTCTACAGCCAGCACAATCTGAGTATGAGAAGCTTTGTTGTTTCCCTATCTAGAAGTGTTATTGCCAACTATATTTCATCACCTGAGGTGAATTTCCTGCGAAGTATCGCATCGCGATTGAATCCACGAGTGACAAAGCGCGTTTTCCGGTTTCTCAACGAAGATGATATTGAGCCATCAACAAGTCAAACATATGGTTCTCTAGTGAAGAATCTCACATTTGTTAAAACCTTTGCCGCTGGGATTCTTGTTCCCAAACACTATATCTGGCCAACGGACAGCAGCTTGTACTTGCAGCCACATACATCGGTTGTTTCGGACGCTCATAAGGAAGGACTTGAGATTTATGCAGCCGACTTTGTTAATGATGTACCATTTGCTTATAATTATAGCTATGATCCTGTAGCTGAGTATTTATCCTTTATAGACAACGGTGAGTTCTCGGTGGACGGAGTGTTATCTGACTTCCCAATGTCTCCATCTGCGTCAGTAGGTAAGTGACAGTCTATTTTGATTCTGTATTGAGAGTGTGCTAGTATAAGCTTTGTTTACTGCTCTCATAGTTTCTCTTAATCTTTCTATGGTACTTATCCATTTCTAATCTCGCAGATTGCTTCTCGCATTTGGGTGCGAATGATAAGCCTCAAGGTATGCTGTTGATATACACACTTTTCCAGAATAATTTATGTTGTTTAATATGTTTAGACATTTTCATTGAAATCTTGACAATGCAAGTTATCTTGCAAAGCTTTCAAATTCTCACACTTGTTTAAAATGAATTGAACATGGAGTCAACTAATTTTCATAAAATTGAAACCTTGAATTTGATTTACGTAACTTTCTAAGTAAATGAGCTTTACCCTGTCCCTTGTTCACATGCGACATTCCATGTTAAACTATGTGTTATTTATACGGACATAAATTATGTATTGTTTTACTGCAGTACAATGCGGAAATATATTACAATTAGCAATACCTAGATGTCAGTAACTAATGATGATATACCTTATAGTAGGCGTCCCCTGCACAAAAATCTCTGTTATCGTTCAGCATATAACAGTTCACTCTAAGATATCCATGCATAACTAGTTCACCAAATGATGGCATACTGATTATCGATGTTCACTCTCTTGTTCTCTCTTCCTCCTTTGGCCTGCAGTAACTCTTCAGATTATCGCACCTCAAGGAGCAAGTGGTGACTATCCTGGTTGTACAGATTTAGCATATACAAAAGCTGCTTCCGATGGTGCAGATATTATTGGCTGTCCTGTCCAAATGACAAAAGATGGAATACCCTTCTGCCTTAGTTCGATAAATCTGATAGACACGACGACTGCGGCCCAATCGCCATTCAGCGACATCGCTACCACTGCTCCAGAGCTTCAGATAACAGATGGAATACTCACCATCAACCTAAACTGGAGCGATATTCAAACGCTGAAACGTAAGTTGAATTATCTGTATTGTGTTTTTTTATCTTCTTCATATCTGGGACTTCTGTACTGTGATGCATTTATCTTTGCACATATAACAAATTCAGGGATTAATTTAAGTTTTTAGCTATTTATCTTTTAGCTTGTTAATTTTTTTGAAATGCAGATATAAGCTCTTAAAGAGGAGCAATGTTCTAGGAATTCATCATCCCAGTTCTCCTTCCTCATTAAGAATGTTTTTGAAATGTGTGAAATAATTTCGAAAACTGGAATTTTATTTGGCTTAATAATAGCCTCTTTTTTCCACTTTGACATGCTTTTGTGGCATACACTTTCCGCAAGCTCTTTTAAGACATGTTCTCGAATTTTCTAGAGACCTTCATTTCTTGTATGGACATTTCTGCAATGCTTACTTTTCTTCTAATTATTTGTCATTGCAAGATTATGCACTACTTCAATTGAAATTTCGGAATACTATTGTTTCAAAATGCATTTAAACATGCTCTAATGTCTTGCAGCGGTAATATCAACCCGGTATTCAGACTTTAGATTGTCACGGAATCCAAAGGCCAGAAATGTTGGAAAGTTTATGTCGTTAGCAGACTTCTTGACATTTTCCAAAACTGCTAATGTTTCTGGTATAATGATCAGCATAGAGGTGAGTTTCTTCAGGGACTACTGACCTTATTTATACCTATATTCTTATGCATCAATATAGTGTAAGCTCATTTCCGAATCCTAAATGCTTATAAGTTATATACTCACTCCTTATCACTCCTCATTCTAAGTGCAAATTTCATAGCTTCTTATGCTATTTCATAGGTGATTGAATGTGGGAAGCATGCCAAACTTTCCCTTGAAAGAATTTGGAACCAGAAAATGCTTTTGGAAAATGGTCTGTATATTTTCAAAAGGAAAGGATTCACTTTATGACTAGTATTTTAAAGGTTTAATCGTCTGCAAGTATATAAAGGATCTCAATATCTCCAATTTTCTGAAATATTCTCTACAAGTTACAACTAAGCAATTTTAACTGCTTTCCAAGTACAATAATGACTTCCTTTTTAGTAGTAGAATCATAATAATTCTATTTCCATTACTGAAATGAAGAATTACCCACTCAATGTTGAAAGGAATAAAGGATTATAAGCAAAACAATAAGAACTTTGACATCACAAAAAAAGAGAGGAAAGAACAGTCAAAGTAGCGACATTTTTTTTAAATGCTTACACGGGAAAAATCCTGATTTTAATGGATATCTTTGCACACTGGAGGTTTTACCTCCTTCCTCAATATTTGACACAATATTCTGGCTTCATGCAGAATGCTGCATACCTGGCAAAGCAGGGATTAGGTGTAACTGATGCGGTTTTGGATGCCCTAAGCACAGCTGGTTACAATAATCAGACAGCTAGGAAAGTTATGATCCAATCAAATGACAGTTCTGTTCTGGAAGAATTCAAGAAGAGTAGTTATGAACTTGTTTATTTGGTTGACGATAATATCAGTGATATTAAGAACTCAACTATATTGGAGATCAAGACCTTTGCAAAATCTGTTGTCATAACCAAGAAATCAGTCTTCCCCAGTGAAGACGCTTTTATCATTGGTCAAACGAATATTGTGCAGAAGCTGCAGTCAGCAAATCTCCCGGTATATGTACGACTATTTAATAACGAGTTTATATCTCAAGCATGGGACTTCTTCTCAGATTCGTCTACTGAGATAAACAACTATGTTCTTGGAGCTGGTGTTGATGGTCTTGTTACAGAATACCCTGGGACAGCGGCTAGATACCGAAGTAAGTTATTATATACCTTTGTTGTCTCTCATACCGTGTTCCAATCTTCCCCCTTTCCCCTTTCTTTCTCTTTTAGTTTCTCGATCTATCATCCTCAAACATCAGTATAAATGAATCTCCGGTGTAATCTGCTAGATTTGTGTATATTTTACCAGAGCATTTGCTTGGTCATATCCATTAAGTTGTTCGTGCGAAATGCAACATTAGTACTATATATCCTCAATTTGACACATTCCAATTGTTGGGAATGTACAGGGAACCGTTGTTTAGCATACAAAAACTTGCCACCATATATGAGCCCTGTTCAACCTGGGAGTCTCCTGGGACTCATGACTGTTCAGTCTATGCCACCAGTCGAACCTCCCAGCCCCGTGCTCGATGTAAGTGATGTGACTGAGCCACCACTTCCACCTGTTGCAAAGATAAACCCAAGTAACGACGATGGTTCTACAGCTAGAGCTCCCACTACTCCTCCAAATGGCCAATCCTCAGTTGTTGCTAGCATTCTCATGAGCTCAGTTGCAGTTCTTCTAGCAATTTTCATGGTATATTGATGACCATTTCTACTTTGGTGCCACCATTTTGTACAATTTGTTTTGCCATCTTACTGATCAAACCTCCCTCTGGTGATTATGGAGTCGCACATGATGGCGGCGGTAGTCAGCTCATTTAACACATGATTGTTTCCTTGTATTTGCGATGTATCAAAATTTTCAGCTCTTGTTTATTCTTTACATTCTTCCTCGTTTCTATTTTTCATTCCTTCCCTCCCCTTTTTTTTTCCATTTTGGGTCAGATTGAGTGGGTGTCTGGGGTTTATTGCCTATTTATTTGTAAGAATTCTGTTTTGGATATAAGCAATGATCAATTTAGTTAGTATTTTTCATACACAGCCTT</genome_strand>
        <mrna_strand>AAAAATATTTGCCAGCCTGAAAATAGCCCACACCCCTCAAAGGCAAGGCACAAACACTCACACACTTTCTCTCTCTATCTATCTGCTCTCAAAGTCTCCTCAACTTGTCAATCATCACACTTTTTCTTCACACAAATCAGCTGAATCTCTCCATATTCTCCTCCACCTCCGTCACTAACGGAAAAAAATTTACGCCGGAAAACGATTCTCCGGCTGAGCTCGCCGGAAATGAGGAAAATGCGTTCTGTTTTATGTCTCCTGGTACTTTGTTGCTCAGTTGCATTTGTTGCTGCTCAAAGATCTAACAATGTAACCTCTAAATGGAAAACACTGAGCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATGCACCAAAAGTCATAGCTCGTGGAGGATTTTCTGGGTTACTTCCTGATTCAAGCTTTAATGCCTACATGTTGGCACAAGCAATTAGCTCGGCTGATTGGGTTGCTTGGTGTGATGTTCAACTCACAAAAGACGGGGTTGGCATTTGTTTTCCTGATATCAAGCTTAACAATGCTTCTGACATCGATACTCTCTACCCAAACAGGAATAACAACTACTCGGTGAATGGAATTCCTCAGACAGGATGGTTTTCTATAGATTTCAGCATCAAGGATTTGGCACCTGTCAGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAACAAGGAGTGTATTCGCGGTCGCCTAGATTTGATGGCACTCCCCAGCAAATTCTTACTGTCCAGGATGTAGCTACCCAAGTCAAACCTCCAGGATTATGGTTGAATATCCAG...........................................................................................................................................................................................CATGATTCCTTCTACAGCCAGCACAATCTGAGTATGAGAAGCTTTGTTGTTTCCCTATCTAGAAGTGTTATTGCCAACTATATTTCATCACCTGAGGTGAATTTCCTGCGAAGTATCGCATCGCGATTGAATCCACGAGTGACAAAGCGCGTTTTCCGGTTTCTCAACGAAGATGATATTGAGCCATCAACAAGTCAAACATATGGTTCTCTAGTGAAGAATCTCACATTTGTTAAAACCTTTGCCGCTGGGATTCTTGTTCCCAAACACTATATCTGGCCAACGGACAGCAGCTTGTACTTGCAGCCACATACATCGGTTGTTTCGGACGCTCATAAGGAAGGACTTGAGATTTATGCAGCCGACTTTGTTAATGATGTACCATTTGCTTATAATTATAGCTATGATCCTGTAGCTGAGTATTTATCCTTTATAGACAACGGTGAGTTCTCGGTGGACGGAGTGTTATCTGACTTCCCAATGTCTCCATCTGCGTCAGTAG....................................................................................................................ATTGCTTCTCGCATTTGGGTGCGAATGATAAGCCTCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACTCTTCAGATTATCGCACCTCAAGGAGCAAGTGGTGACTATCCTGGTTGTACAGATTTAGCATATACAAAAGCTGCTTCCGATGGTGCAGATATTATTGGCTGTCCTGTCCAAATGACAAAAGATGGAATACCCTTCTGCCTTAGTTCGATAAATCTGATAGACACGACGACTGCGGCCCAATCGCCATTCAGCGACATCGCTACCACTGCTCCAGAGCTTCAGATAACAGATGGAATACTCACCATCAACCTAAACTGGAGCGATATTCAAACGCTGAAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTAATATCAACCCGGTATTCAGACTTTAGATTGTCACGGAATCCAAAGGCCAGAAATGTTGGAAAGTTTATGTCGTTAGCAGACTTCTTGACATTTTCCAAAACTGCTAATGTTTCTGGTATAATGATCAGCATAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCTGCATACCTGGCAAAGCAGGGATTAGGTGTAACTGATGCGGTTTTGGATGCCCTAAGCACAGCTGGTTACAATAATCAGACAGCTAGGAAAGTTATGATCCAATCAAATGACAGTTCTGTTCTGGAAGAATTCAAGAAGAGTAGTTATGAACTTGTTTATTTGGTTGACGATAATATCAGTGATATTAAGAACTCAACTATATTGGAGATCAAGACCTTTGCAAAATCTGTTGTCATAACCAAGAAATCAGTCTTCCCCAGTGAAGACGCTTTTATCATTGGTCAAACGAATATTGTGCAGAAGCTGCAGTCAGCAAATCTCCCGGTATATGTACGACTATTTAATAACGAGTTTATATCTCAAGCATGGGACTTCTTCTCAGATTCGTCTACTGAGATAAACAACTATGTTCTTGGAGCTGGTGTTGATGGTCTTGTTACAGAATACCCTGGGACAGCGGCTAGATACCGAA...............................................................................................................................................................................................................................................................GGAACCGTTGTTTAGCATACAAAAACTTGCCACCATATATGAGCCCTGTTCAACCTGGGAGTCTCCTGGGACTCATGACTGTTCAGTCTATGCCACCAGTCGAACCTCCCAGCCCCGTGCTCGATGTAAGTGATGTGACTGAGCCACCACTTCCACCTGTTGCAAAGATAAACCCAAGTAACGACGATGGTTCTACAGCTAGAGCTCCCACTACTCCTCCAAATGGCCAATCCTCAGTTGTTGCTAGCATTCTCATGAGCTCAGTTGCAGTTCTTCTAGCAATTTTCATGGTATATTGATGACCATTTCTACTTTGGTGCCACCATTTTGTACAATTTGTTTTGCCATCTTACTGATCAAACCTCCCTCTGGTGATTATGGAGTCGCACATGATGGCGGCGGTAGTCAGCTCATTTAACACATGATTGTTTCCTTGTATTTGCGATGTATCAAAATTTTCAGCTCTTGTTTATTCTTTACATTCTTCCTCGTTTCTATTTTTCATTCCTTCCCTCCCCTTTTTTTTTCCATTTTGGGTCAGATTGAGTGGGTGTCTGGGGTTTATTGCCTATTTATTTGTAAGAATTCTGTTTTGGATATAAGCAATGATCAATTTAGTTAGTATTTTTCAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QPbVQW/lycopersicum_combined_unigene_seqs" ref_id="SGN-U338098" ref_strand="-" ref_description="SGN-U338098        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>cacctcagagccagtaatgagcaaaagtgaagaatgcaaatgttgatgcctgctgcaactgatttcctttggtcggtactccgagcattctgtgtatgctgtttttggtactgaagtgagatttatgccacattgaccaatgtcagagttgtacaggggcacaaaacggcaacgcattttttcataatacagagatgtaatattgactttttgatataccaaaaacagtgcaaaagataattggtctgcctaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184E04-z8xSb/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0184E04.1" temp_strand="-" temp_description="C07HBa0184E04.1  AC212637.1 htgs_phase:1 submitted_to_sgn_as:gi|158262132|gb|AC212637.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0184E04, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="29680" stop="28863"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29380" g_stop="29136" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="243" r_length="243" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="252" polyA_stop="268"/>
      <MATCH_line gen_id="C07HBa0184E04.1" gen_strand="-" ref_id="SGN-U338098" ref_strand="-">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>245</cumulative_length_of_scored_exons>
        <coverage percentage="0.914" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184E04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U338098" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="29380" e_stop="29136"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACCTCAGAGACAGAAATGAGCAAAAGTGAAGAATGCAATTGTTGCTGCCTGCTGCAACTGATTTCTTTTGGTCGGTACTCCGAGCATTCTGTGTATGCTGTTTTTGGTACTGAAGTGAGATTTATGCCACATTGACCAATGTCAGAGTTGTACAGGGGCACAAAACGGCAACACATTTTTTCATAATACAGAGATGTAATATTGACTTTTTGATATATACCAAAAACCGTGCAAAAGATTATTG</genome_strand>
        <mrna_strand>CACCTCAGAGCCAGTAATGAGCAAAAGTGAAGAATGCAAATGTTGATGCCTGCTGCAACTGATTTCCTTTGGTCGGTACTCCGAGCATTCTGTGTATGCTGTTTTTGGTACTGAAGTGAGATTTATGCCACATTGACCAATGTCAGAGTTGTACAGGGGCACAAAACGGCAACGCATTTTTTCATAATACAGAGATGTAATATTGACTTTTTG--ATATACCAAAAACAGTGCAAAAGATAATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QPbVQW/lycopersicum_combined_unigene_seqs" ref_id="SGN-U333418" ref_strand="+" ref_description="SGN-U333418        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | beta-(1,2)-xylosyltransferase (XYLT), identical to SP:Q9LDH0 | chr5:22499386-22501857 FORWARD | Aliases: MTE17.21, MTE17_21(evalue: 5e-174, score=608) genbank/nr: Beta-1,2-xylosyltransferase(evalue: 0, score=978)">
      <seq>ggagagagaggggaagaagaagatgaacaagaagaagctgaaaattcttctttctctctttgctctcaacacaattactctttatctctacttctcttcacacccagatcatttccgccacaatttccctaaaaaccactatattactaccggaaaccgcttttcttcatcggaaaaccatccaaatttgcactcctccgttgcttcccaatccaaaccatggcctattttgccgtcttacctcccttggtctcagaaccccaacgttggttggagatcgtgtgagggttattttggaaatgggtttactcgtaaaatcgatcttctcaaagcctcgccggagattcaccggaaattcggtgaaaacagatatttcggtgaaggaggagtaggagggtggtttaggtgttttttcagtgagacattgcagagttcgatttgtgaaggaggggtaataagaatgaatccggagaaaattttgatgtctaaaggaggagagaaattggaagaagtaataggaaggggagaagaagaagagttacccatttttgaaaatggagcttttgagatagaggttaatgaaagaacaaaaattgggaaaaaattagctgatgaaaatttcttgaataaatatttacctgaaggtgcagtctcaaagcacactatgagggaattaatcgactcgattcgattagttgacgccaatgattttcattgttctgagtggattgaggagccatcacttttgattacccgatttgagtatgcaaatctttttcatacaattactgattggtatagtgcatacgcggcatccagagttactggcttacccagtcggccacatttggtttttgtagatggccattgtgagacacaattggaggaaacatggagagcactgttttcaagcctcacttatgctaaaaactttagcggtccggtttgttttcgccatgctatcctctcgccgttgggatatgaaactgccctgtttaaggggctttcagaaagtatcggttgtactggagctcctgcccatgatttgtggcaaaatcccagtgatagtaaaactgcacggttgtccgagtttggagagatgatcagagcagcctttggatttcctgtggatagacagaacatcccaaggacagtcactggccacaatgtcctctttgttagacgcgaggattatttagctcacccacgtcatggcggaaaggtacagtctaggcttagcaatgaacaagaagtatttgattccataaagagctggtccttgaaccacacagagtgcaaagtaaatgtgattaacggattatttgcccacatgtccatgaaagatcaagttcgagcaatccaagatgcttctgtcattgtaggtgctcatggagcaggtctaacgcacattgtttctgcatcaccaaaagctgttatactagaaatcataagcagtgaatataggcgcccccatttttctctgattgcttattggaaaggattggagtaccatcccattgatttggagggatcttatgcggatccaccagtcgtaattgacaagctcaacagtattttgaggagtcttggctgctaaatctactcaacagtttgaacagttcaacttttctctacaagactggaatttggagcctgaaaatcttgtaaaatatgtttcatctgcagttctatagttttgctgcattcttgatcctcaatccggtgttcacaagcttcacaggttctggcagttactaatttattagcccctctcagttatgaactctcagaacgatcgttatggtgagctcattcaagatattctttatggtgcaatattacaagtcactcgcgatacacacatttgtaaatcacattataggtgtgtacaacttcattacaattcgttgtcaattgttttctgcaatttattatcttcttgttctgggaagacacagattaacaagcatgttgaagtagcagattaacaagaacctcagtgtactgttcagtgatgtatgattgtaacttgtaacaaaacaaaagaaatgagacatttaacaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184E04-z8xSb/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0184E04.1" temp_strand="-" temp_description="C07HBa0184E04.1  AC212637.1 htgs_phase:1 submitted_to_sgn_as:gi|158262132|gb|AC212637.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0184E04, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="39602" stop="35295"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="39303" g_stop="38580" g_length="724"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="724" r_length="724" r_score="0.999"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="38579" i_stop="37475" i_length="1105">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="37474" g_stop="37325" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="725" r_stop="874" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="37324" i_stop="36789" i_length="536">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.909" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="36788" g_stop="35596" g_length="1193"/>
          <reference_exon_boundary r_type="cDNA" r_start="875" r_stop="2067" r_length="1193" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="2068" polyA_stop="2078"/>
      <MATCH_line gen_id="C07HBa0184E04.1" gen_strand="-" ref_id="SGN-U333418" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>2067</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184E04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U333418" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="39303" e_stop="38580"/>
          <exon e_start="37474" e_stop="37325"/>
          <exon e_start="36788" e_stop="35596"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGAGAGAGGGGAAGAAGAAGATGAACAAGAAGAAGCTGAAAATTCTTCTTTCTCTCTTTGCTCTCAACACAATTACTCTTTATCTCTACTTCTCTTCACACCCAGATCATTTCCGCCACAATTTCCCTAAAAACCACTATATTACTACCGGAAACCGCTTTTCTTCATCGGAAAACCATCCAAATTTGCACTCCTCCGTTGCTTCCCAATCCAAACCATGGCCTATTTTGCCGTCTTACCTCCCTTGGTCTCAGAACCCCAACGTTGGTTGGAGATCGTGTGAGGGTTATTTTGGAAATGGGTTTACTCGTAAAATCGATCTTCTCAAAGCCTCGCCGGAGATTCACCGGAAATTCGGTGAAAACAGATATTTCGGTGAAGGAGGAGTAGGAGGGTGGTTTAGGTGTTTTTTCAGTGAGACATTGCAGAGTTCGATTTGTGAAGGAGGGGTAATAAGAATGAATCCGGAGAAAATTTTGATGTCTAAAGGAGGAGAGAAATTGGAAGAAGTAATAGGAAGGGGAGAAGAAGAAGAGTTACCCATTTTTGAAAATGGAGCTTTTGAGATAGAGGTTAATGAAAGAACAAAAATTGGGAAAAAATTAGCTGATGAAAATTTCTTGAATAAATATTTACCTGAAGGTGCAGTCTCAAAGCACACTATGAGGGAATTAATCGACTCGATTCGATTAGTTGACGCCAATGATTTTCATTGTTCTGAGGTTTGATTTTTTGGAACTTTGTTTGATCTGATATTAAAGTTTTGATCTTTGGGAATGTTTGTTGATATGGAATACAGTAATGGATTTTGTTTGATCTATTTAATGAAGATTAATTTATCTAATTGTTGCTTTAGAATAGTAGCTCAGTGTTATAAATGTTGTTTTATATGTGTCATTTAAGATAATTCCTTGAAATCTGGAGTAGAGGGTGGATAACATTAGTTAATTAACTTTTGGATTGTGGTTGCATTTCATTTGATTGTGTTATAGATAAAGTGGTGATTTTGGAATCTGTTACTAAATATTTTGTTAAGATTTTAGAGTTTATCCAGAGCTTTCATTGTAGTTCTGTATCTGAATCCATAAAGTTATCGAATTTATGGACCTCGAAGAGTATTTATTGTTGGTAGTTAACGACCTTAAGTTGGCAAATGGTCAGTGTATGTGATCTATGGTGAATCCTACGACTTTTGATCTCCTTTCATCTCTTTATTTCCATTTTACAAATGGAATATGGTAGCATTTGTCTGAGCTGGTCAGCTTTGTCCTGAAAACCTTAATAACCAATTCGATTAAATGCCTTTTGAAACTTACTTGGACAACTGGTTGTTGCATTTTGAGGACTATCGACTTGATCTGACAGTATGCCAAACATGGCTTCTATGTTAGGAGTAACTTATGTCTAGGAGGAAATCCGTGCTAGATAGGGACCTTTCACTTGGTTACTAGCTACTCAAAGTTCCAGTATGACCAGTTAATTTTAGATCTTTGCTGTGGTATCATTCAAAGTCCAAAGTTTTGTTGTGCACTAACAAGAGGAATACATGAAGGATGTAGCACTGTTAGGTTACATTACCTTATCCACTAATGAAAGAGAATCAACTAAAATGATGATAAGTGGTGTTCTATTGCTATTTTAGATTGCTGATTATTGGAATATTTATGAGATGAACATCTTTTCAGTTCTTCATGTGCTAATCAAAAAATTATCCATGCTAGATGTCAGTGTTCAAGCAACCATGTAAGGAAGCTGTGTCTTTTGTTAATGCCATCTTTCCGTAATCGATGCCTTACATTGCTGTTATTTTTCCAATTTTTGTTTCAGTGGATTGAGGAGCCATCACTTTTGATTACCCGATTTGAGTATGCAAATCTTTTTCATACAATTACTGATTGGTATAGTGCATACGCGGCATCCAGAGTTACTGGCTTACCCAGTCGGCCACATTTGGTTTTTGTAGATGGCCATTGTGAGGTACGTTTGAAATTATTGTTGATTATGGTGTGCTGCATTGTTCTGTGTCATGGATGAATGTAGACTCAGTAATTTTTCTCTAGCAATCCAATGGACTTGAGATTCTTGTGTCAAGTTGGTTTGACTTAATCCCGAGTTTCCCTTTGTTTCTGTTTCTATTTGACACAGCGATTTACTCAGCAGTACCTAGTTGTTGCAATTGGCTCATTCTTACTTCTATTTACATGTCACTATTTATTTGAATGGTCCTTTGATGGTAAAAAGAAGTTCTATTACTAAAAAAAAATTAGCAATGATTTCATTTCTGGACAATTTATTGTTACCTTACATCCCCGTCTTGAAAATTCCTTCCTGTGCATACTTTTATGGGACTGACGTTCATAGCCTACGCTTTCATGTGTTTAAAGCTCTTTCACCCCATTACTATAATCTTGATGATTACTTGGCCAAGATTTTTTTTGGCATGTTTCATTTATCTTCAAATTCAGTTTCTTCATGTTAACTGCTTTTACTCCTGTTTGGAAAAAAAAATCCAGACACAATTGGAGGAAACATGGAGAGCACTGTTTTCAAGCCTCACTTATGCTAAAAACTTTAGCGGTCCGGTTTGTTTTCGCCATGCTATCCTCTCGCCGTTGGGATATGAAACTGCCCTGTTTAAGGGGCTTTCAGAAAGTATCGGTTGTACTGGAGCTCCTGCCCATGATTTGTGGCAAAATCCCAGTGATAGTAAAACTGCACGGTTGTCCGAGTTTGGAGAGATGATCAGAGCAGCCTTTGGATTTCCTGTGGATAGACAGAACATCCCAAGGACAGTCACTGGCCACAATGTCCTCTTTGTTAGACGCGAGGATTATTTAGCTCACCCACGTCATGGCGGAAAGGTACAGTCTAGGCTTAGCAATGAACAAGAAGTATTTGATTCCATAAAGAGCTGGTCCTTGAACCACACAGAGTGCAAAGTAAATGTGATTAACGGATTATTTGCCCACATGTCCATGAAAGATCAAGTTCGAGCAATCCAAGATGCTTCTGTCATTGTAGGTGCTCATGGAGCAGGTCTAACGCACATTGTTTCTGCATCACCAAAAGCTGTTATACTAGAAATCATAAGCAGTGAATATAGGCGCCCCCATTTTTCTCTGATTGCTTATTGGAAAGGATTGGAGTACCATCCCATTGATTTGGAGGGATCTTATGCGGATCCACCAGTCGTAATTGACAAGCTCAACAGTATTTTGAGGAGTCTTGGCTGCTAAATCTACTCAACAGTTTGAACAGTTCAACTTTTCTCTACAAGACTGGAATTTGGAGCCTGAAAATCTTGTAAAATATGTTTCATCTGCAGTTCTATAGTTTTGCTGCATTCTTGATCCTCAATCCGGTGTTCACAAGCTTCACAGGTTCTGGCAGTTACTAATTTATTAGCCCCTCTCAGTTATGAACTCTCAGAACGATCGTTATGGTGAGCTCATTCAAGATATTCTTTATGGTGCAATATTACAAGTCACTCGCGATACACACATTTGTAAATCACATTATAGGTGTGTACAACTTCATTACAATTCGTTGTCAATTGTTTTCTGCAATTTATTATCTTCTTGTTCTGGGAAGACACAGATTAACAAGCATGTTGAAGTAGCAGATTAACAAGAACCTCAGTGTACTGTTCAGTGATGTATGATTGTAACTTGTAACAAAACAAAAGAAATGAGACATTTAACAAGAA</genome_strand>
        <mrna_strand>GGAGAGAGAGGGGAAGAAGAAGATGAACAAGAAGAAGCTGAAAATTCTTCTTTCTCTCTTTGCTCTCAACACAATTACTCTTTATCTCTACTTCTCTTCACACCCAGATCATTTCCGCCACAATTTCCCTAAAAACCACTATATTACTACCGGAAACCGCTTTTCTTCATCGGAAAACCATCCAAATTTGCACTCCTCCGTTGCTTCCCAATCCAAACCATGGCCTATTTTGCCGTCTTACCTCCCTTGGTCTCAGAACCCCAACGTTGGTTGGAGATCGTGTGAGGGTTATTTTGGAAATGGGTTTACTCGTAAAATCGATCTTCTCAAAGCCTCGCCGGAGATTCACCGGAAATTCGGTGAAAACAGATATTTCGGTGAAGGAGGAGTAGGAGGGTGGTTTAGGTGTTTTTTCAGTGAGACATTGCAGAGTTCGATTTGTGAAGGAGGGGTAATAAGAATGAATCCGGAGAAAATTTTGATGTCTAAAGGAGGAGAGAAATTGGAAGAAGTAATAGGAAGGGGAGAAGAAGAAGAGTTACCCATTTTTGAAAATGGAGCTTTTGAGATAGAGGTTAATGAAAGAACAAAAATTGGGAAAAAATTAGCTGATGAAAATTTCTTGAATAAATATTTACCTGAAGGTGCAGTCTCAAAGCACACTATGAGGGAATTAATCGACTCGATTCGATTAGTTGACGCCAATGATTTTCATTGTTCTGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATTGAGGAGCCATCACTTTTGATTACCCGATTTGAGTATGCAAATCTTTTTCATACAATTACTGATTGGTATAGTGCATACGCGGCATCCAGAGTTACTGGCTTACCCAGTCGGCCACATTTGGTTTTTGTAGATGGCCATTGTGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAATTGGAGGAAACATGGAGAGCACTGTTTTCAAGCCTCACTTATGCTAAAAACTTTAGCGGTCCGGTTTGTTTTCGCCATGCTATCCTCTCGCCGTTGGGATATGAAACTGCCCTGTTTAAGGGGCTTTCAGAAAGTATCGGTTGTACTGGAGCTCCTGCCCATGATTTGTGGCAAAATCCCAGTGATAGTAAAACTGCACGGTTGTCCGAGTTTGGAGAGATGATCAGAGCAGCCTTTGGATTTCCTGTGGATAGACAGAACATCCCAAGGACAGTCACTGGCCACAATGTCCTCTTTGTTAGACGCGAGGATTATTTAGCTCACCCACGTCATGGCGGAAAGGTACAGTCTAGGCTTAGCAATGAACAAGAAGTATTTGATTCCATAAAGAGCTGGTCCTTGAACCACACAGAGTGCAAAGTAAATGTGATTAACGGATTATTTGCCCACATGTCCATGAAAGATCAAGTTCGAGCAATCCAAGATGCTTCTGTCATTGTAGGTGCTCATGGAGCAGGTCTAACGCACATTGTTTCTGCATCACCAAAAGCTGTTATACTAGAAATCATAAGCAGTGAATATAGGCGCCCCCATTTTTCTCTGATTGCTTATTGGAAAGGATTGGAGTACCATCCCATTGATTTGGAGGGATCTTATGCGGATCCACCAGTCGTAATTGACAAGCTCAACAGTATTTTGAGGAGTCTTGGCTGCTAAATCTACTCAACAGTTTGAACAGTTCAACTTTTCTCTACAAGACTGGAATTTGGAGCCTGAAAATCTTGTAAAATATGTTTCATCTGCAGTTCTATAGTTTTGCTGCATTCTTGATCCTCAATCCGGTGTTCACAAGCTTCACAGGTTCTGGCAGTTACTAATTTATTAGCCCCTCTCAGTTATGAACTCTCAGAACGATCGTTATGGTGAGCTCATTCAAGATATTCTTTATGGTGCAATATTACAAGTCACTCGCGATACACACATTTGTAAATCACATTATAGGTGTGTACAACTTCATTACAATTCGTTGTCAATTGTTTTCTGCAATTTATTATCTTCTTGTTCTGGGAAGACACAGATTAACAAGCATGTTGAAGTAGCAGATTAACAAGAACCTCAGTGTACTGTTCAGTGATGTATGATTGTAACTTGTAACAAAACAAAAGAAATGAGACATTTAACAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QPbVQW/lycopersicum_combined_unigene_seqs" ref_id="SGN-U331930" ref_strand="+" ref_description="SGN-U331930        Tomato 200607 #1 [2 ESTs aligned]">
      <seq>tttgaaactgtcacctacatgttgcaggtaatttattttcaattttacactttttataaaaataaaatcagaaaaaaaagaagcaaattaagatattagacctaatccatcgaagcctctattggatagactgaacgaactgtccaatggtaatgaataaggaaccatttgcggagattgattcaagggattaactttatttgaccttattaaagctgaaaagaaatttcatttaaaccctttaattaaacggtatttattttagatactttatatcggcttgtgtctcttttcatatgatgttggtgcaaattagtttccacgtttcataaaattaaaggagtagttgaataaatgtgattgttcaacttaaaaggatcaaaataaatatgtttaacttataaatgacttagattaatttatgtttgaacagtcagcacataaatgtccattttgtttttgtatcctaaatttcatgatgttgaaaattatttaggtaaacaacatttatatgttaaaatttcatattaattgaaattaaagcaagtttttttttatttttatatttaatattattatttgtacaaaagggaggctcagaggcgaaaccatcttatactaggagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184E04-z8xSb/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0184E04.1" temp_strand="-" temp_description="C07HBa0184E04.1  AC212637.1 htgs_phase:1 submitted_to_sgn_as:gi|158262132|gb|AC212637.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0184E04, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="47781" stop="46556"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47481" g_stop="46856" g_length="626"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="626" r_length="626" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184E04.1" gen_strand="-" ref_id="SGN-U331930" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>626</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184E04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U331930" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47481" e_stop="46856"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGAAACTGTCACCTACATGTTGCAGGTAATTTATTTTCAATTTTACACTTTTTATAAAAATAAAATCAGAAAAAAAAGAAGCAAATTAAGATATTAGACCTAATCCATCGAAGCCTCTATTGGATAGACTGAACGAACTGTCCAATGGTAATGAATAAGGAACCATTTGCGGAGATTGATTCAAGGGATTAACTTTATTTGACCTTATTAAAGCTGAAAAGAAATTTCATTTAAACCCTTTAATTAAACGGTATTTATTTTAGATACTTTATATCGGCTTGTGTCTCTTTTCATATGATGTTGGTGCAAATTAGTTTCCACGTTTCATAAAATTAAAGGAGTAGTTGAATAAATGTGATTGTTCAACTTAAAAGGATCAAAATAAATATGTTTAACTTATAAATGACTTAGATTAATTTATGTTTGAACAGTCAGCACATAAATGTCCATTTTGTTTTTGTATCCTAAATTTCATGATGTTGAAAATTATTTAGGTAAACAACATTTATATGTTAAAATTTCATATTAATTGAAATTAAAGCAAGTTTTTTTTTATTTTTATATTTAATATTATTATTTGTACAAAAGGGAGGCTCAGAGGCGAAACCATCTTATACTAGGAGT</genome_strand>
        <mrna_strand>TTTGAAACTGTCACCTACATGTTGCAGGTAATTTATTTTCAATTTTACACTTTTTATAAAAATAAAATCAGAAAAAAAAGAAGCAAATTAAGATATTAGACCTAATCCATCGAAGCCTCTATTGGATAGACTGAACGAACTGTCCAATGGTAATGAATAAGGAACCATTTGCGGAGATTGATTCAAGGGATTAACTTTATTTGACCTTATTAAAGCTGAAAAGAAATTTCATTTAAACCCTTTAATTAAACGGTATTTATTTTAGATACTTTATATCGGCTTGTGTCTCTTTTCATATGATGTTGGTGCAAATTAGTTTCCACGTTTCATAAAATTAAAGGAGTAGTTGAATAAATGTGATTGTTCAACTTAAAAGGATCAAAATAAATATGTTTAACTTATAAATGACTTAGATTAATTTATGTTTGAACAGTCAGCACATAAATGTCCATTTTGTTTTTGTATCCTAAATTTCATGATGTTGAAAATTATTTAGGTAAACAACATTTATATGTTAAAATTTCATATTAATTGAAATTAAAGCAAGTTTTTTTTTATTTTTATATTTAATATTATTATTTGTACAAAAGGGAGGCTCAGAGGCGAAACCATCTTATACTAGGAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QPbVQW/lycopersicum_combined_unigene_seqs" ref_id="SGN-U314526" ref_strand="+" ref_description="SGN-U314526        Tomato 200607 #1 [21 ESTs aligned] arabidopsis/peptide: | Symbol: None | 40S ribosomal protein S8 (RPS8B), 40S ribosomal protein S8, Prunus armeniaca, EMBL:AF071889 | chr5:23919697-23920959 REVERSE | Aliases: MNC17.7, MNC17_7(evalue: 6e-91, score=330) genbank/nr: putative(evalue: 1e-99, score=365)">
      <seq>gtctttgagaaaatcgaaaccctaaggacctccgtcaccggcgacaatgggtatctctcgtgattctatgcacaagagacgtgccactggaggaaagcagaagacttggaggaagaagagaaagtatgagcttggcagacagcccgcaaacacaaagctggtgccaaatgctaagactgttagaaggataagagtccgaggaggtaatgtgaagtggcgtgctttgaggttggatactgggaatttctcttggggtagcgaggctgttacaaggaagactcgtctgttggatgtggtgtataacgcctctaacaatgagttggttaggacacaaaccctggtgaagagtgcaattattcaggttgacgcagctccatttaagcagtggtatctccagcactatggagttgaaatcggtcgcaagaagaagactgctgtttcttccaaaaaggaaggagaggaggctgaggctgtagcagaggagaaaaagagtaaccatgtccaaagaaagttggaaaagaggcaacaggatcgcaagattgacccacatgtcgaggagcaatttgctagtgggcgtctattggctgcaatctcatcgcgacctggccagtgtggtcgtgctgatggttacatattggaaggaaaggaacttgaattttacatgaagaaacttcagaagaagaaagggaagggtgccggtgctgctgcttagagttgcaggctccaatttttaaattatcagaacaaatttgattttgttttttcttccctattcaacagtctcacttcatttaaagggaatgataaacttcttgtatcagaattagattcaagtttgttttgcatatgcttaactgagaattttgagaaccacctactttatgaaaaaaaagaattttgagaacaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184E04-z8xSb/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0184E04.1" temp_strand="-" temp_description="C07HBa0184E04.1  AC212637.1 htgs_phase:1 submitted_to_sgn_as:gi|158262132|gb|AC212637.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0184E04, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="52683" stop="49812"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52383" g_stop="52334" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="50" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52333" i_stop="52218" i_length="116">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52217" g_stop="52145" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="123" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52144" i_stop="51220" i_length="925">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="51219" g_stop="50883" g_length="337"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="460" r_length="337" r_score="0.997"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="50882" i_stop="50652" i_length="231">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="50651" g_stop="50485" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="461" r_stop="627" r_length="167" r_score="0.994"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="50484" i_stop="50391" i_length="94">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.836" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="50390" g_stop="50112" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="628" r_stop="906" r_length="279" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="907" polyA_stop="924"/>
      <MATCH_line gen_id="C07HBa0184E04.1" gen_strand="-" ref_id="SGN-U314526" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>906</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184E04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U314526" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52383" e_stop="52334"/>
          <exon e_start="52217" e_stop="52145"/>
          <exon e_start="51219" e_stop="50883"/>
          <exon e_start="50651" e_stop="50485"/>
          <exon e_start="50390" e_stop="50112"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTTTGAGAAAATCGAAACCCTAAGGACCTCCGTCACCGGCGACAATGGGTAATGGAATCTATTCATCATTTCATATTTTTAATTCTTCCATTTTATTCGTTTAATATGTATAATTGGAATAGCGAAGTGAATTTAATGGAGAAATTTACTGTGATATTGTATAGGTATCTCTCGTGATTCTATGCACAAGAGACGTGCCACTGGAGGAAAGCAGAAGACTTGGAGGAAGAAGAGAAAGTATGTACAATTTTTTCATATTTAAGCAGCATGCTATCTTTTGTTAATTGTTAACGTGATCTGCTAGATTTAGCATGATTCTGGATTTAGAGTTTATTCAGATTGTTCGATGTATAGAGGTAGATCTGGAGGCTGCTCATTTTTTTAAAGTGATTCCTCACTTATGTGTTCGTATTGTGTTATTATTATGAAATATAATGAAATTTGTACATGCATCCAATTCTATGGAGTTTAAGTTATTGATGTGTACCTATATTGCTTGTTATCTCCAAAAATGTTGTAGAACCTGTTTAAGTGGACCTATGTTGATTGGAATCTCCAAATTTGCACTACTTTTGGGGGATTGACATTTTTGATTAACATAGATGTGGACATAACATAACAATTTAATTGGGTTTAGGGAAGTTTTATTAAGGAAGCAGCTTTGATGATGAAGTTTTGTTCTTTTGTGGTGATTCTCGGATTTTGTTGCTGAATGAGAAAGGAGTTAGTCTAACTAATGGGCCGATCCAAGAAGGGAAAATGTAGAAAAGAAAGTTTTTTTGGAGAACGAAACGTAGAAGAGAAATCAAAAAGCAAAGAAATTTAGCTGTAAGTGAAGAGAGGAAAAACATGAAAAGGGGATTGATATCTCATTGATCCTTTCTTAACAATGATGAATCTAACTGACTTAAGCCTATGCACTGGTCATTTTTCCCAGCTGATATATTACTGAAACTAACTAACAAGAAGGATACGACTAAAATGAAAAGTTACTGATGTGTACTACTGCAAATTTGGTTTGCTTCCTTCCTGATTATTGGGTAATCTCTCTTGATCAGGGATTTTGTTAATTTCTGATATAAAGTGGCTGATATGTATGAAAAATCTGGCTTTTTTGTGGTTACATTTTGAGATTGACTCCGTATCTCCTGCTTCTGTGAAGGTATGAGCTTGGCAGACAGCCCGCAAACACAAAGCTGGTGCCAAATGCTAAGACTGTTAGAAGGATAAGAGTCCGAGGAGGTAATGTGAAGTGGCGTGCTTTGAGGTTGGATACTGGGAATTTCTCTTGGGGTAGCGAGGCTGTTACAAGGAAGACTCGTCTGTTGGATGTGGTGTATAACGCCTCTAACAATGAGTTGGTTAGGACACAAACCCTGGTGAAGAGTGCAATTATTCAGGTTGACGCAGCTCCATTTAAGCAGTGGTATCTCCAGCACTATGGAGTTGAAATCGGTCGCAAGAAGAAGACTGCTGCTTCTTCCAAAAAGGAAGGAGAGGTATTTGAATTGTCTTTTTCAACTACATGCTTCTCCTATATTATGTGATAATATTTTCCTTATCCATGATTCCATAATCAGTTATATTTTATTTGTCTAACGTTCTTATTCTAATTAAAAAAAAACAAGTGAAACTTTCTTTTTGATAAAGGTTGCAAAGCTTTAGCTACAACCAAATTTAATAGAAGTCTTTCTCTGTTTTGTTGACTTCTATTTGTATGATCCAAACAGGAGGCTGAGGCTGTAGCAGAGGAGAAAAAGAGTAACCATGTCCAAAGAAAGCTGGAAAAGAGGCAACAGGATCGCAAGATTGACCCACATGTCGAGGAGCAATTTGCTAGTGGGCGTCTATTGGCTGCAATCTCATCGCGACCTGGCCAGTGTGGTCGTGCTGATGGGTATGAATTCTCTTATCATTATGTATTGTGATATTTCGGTGAAAAATGCCCAATTCCATTGGCTTACACATCTTCTTTCAACGAACTTTGACAGTTACATATTGGAAGGAAAGGAACTTGAATTTTACATGAAGAAACTTCAGAAGAAGAAAGGGAAGGGTGCCGGTGCTGCTGCTTAGAGTTGCAGGCTCCAATTTTTAAATTATCAGAACAAATTAGATTTTGGTTTTTCTTCCCTATTCAACAGTCTCACTTCATTTAAAGGGAATGATAAACTTCTTGTATCAGAGTTAGATTCAAGTTTGTTTTGCATATGCTTAACTGAGAATTTTGAGAACCACCTACTTTATGAAAAAAAAGAATTTTGAGAACA</genome_strand>
        <mrna_strand>GTCTTTGAGAAAATCGAAACCCTAAGGACCTCCGTCACCGGCGACAATGG....................................................................................................................GTATCTCTCGTGATTCTATGCACAAGAGACGTGCCACTGGAGGAAAGCAGAAGACTTGGAGGAAGAAGAGAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGAGCTTGGCAGACAGCCCGCAAACACAAAGCTGGTGCCAAATGCTAAGACTGTTAGAAGGATAAGAGTCCGAGGAGGTAATGTGAAGTGGCGTGCTTTGAGGTTGGATACTGGGAATTTCTCTTGGGGTAGCGAGGCTGTTACAAGGAAGACTCGTCTGTTGGATGTGGTGTATAACGCCTCTAACAATGAGTTGGTTAGGACACAAACCCTGGTGAAGAGTGCAATTATTCAGGTTGACGCAGCTCCATTTAAGCAGTGGTATCTCCAGCACTATGGAGTTGAAATCGGTCGCAAGAAGAAGACTGCTGTTTCTTCCAAAAAGGAAGGAGAG.......................................................................................................................................................................................................................................GAGGCTGAGGCTGTAGCAGAGGAGAAAAAGAGTAACCATGTCCAAAGAAAGTTGGAAAAGAGGCAACAGGATCGCAAGATTGACCCACATGTCGAGGAGCAATTTGCTAGTGGGCGTCTATTGGCTGCAATCTCATCGCGACCTGGCCAGTGTGGTCGTGCTGATGG..............................................................................................TTACATATTGGAAGGAAAGGAACTTGAATTTTACATGAAGAAACTTCAGAAGAAGAAAGGGAAGGGTGCCGGTGCTGCTGCTTAGAGTTGCAGGCTCCAATTTTTAAATTATCAGAACAAATTTGATTTTGTTTTTTCTTCCCTATTCAACAGTCTCACTTCATTTAAAGGGAATGATAAACTTCTTGTATCAGAATTAGATTCAAGTTTGTTTTGCATATGCTTAACTGAGAATTTTGAGAACCACCTACTTTATGAAAAAAAAGAATTTTGAGAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QPbVQW/lycopersicum_combined_unigene_seqs" ref_id="SGN-U322999" ref_strand="+" ref_description="SGN-U322999        Tomato 200607 #1 [7 ESTs aligned] arabidopsis/peptide: | Symbol: None | lysine decarboxylase family protein, contains Pfam profile PF03641: lysine decarboxylase family | chr1:18732387-18734055 REVERSE | Aliases: None(evalue: 1e-98, score=356) genbank/nr: Possible(evalue: 3e-99, score=364)">
      <seq>cccatggggatcccatgatatattgtttccaagttgagagctttgttccctctattgaaaaaaatggggtttgctgcagatagtaccatttcaatggctaatatctttctaagaagctctcatcatcataagaaagatgtaaatttggggtcttgtatgagaaaggaaacatggggttttaatctttacttgccaaagctcaagtaccaatcaagaatctcattttgttgcaagaatgaatcaattgattttgaagaaagaacaagtcctaatgaggtcaagaaagagatagagcaatgctatgaattaatacacaggcttggtcgtggtgttgtgtatttaggatcttcaaggattggtcctggacatccacactacataaaaacctttgaattagggaacaagattgcaactctattagattgtacgacatggtccggggctgggccaggcttaatggatgctgccacacaaggtgctctacaagcagggaagcccgttggcgggttcaagataggtaaagaagcaggggaatggacagctacaaattttcatccatacttaccatcagagagttatcttacatgcaggtttttctccgcaaggaaacacgggctggtggatgctgttgtgagatgtagaagctctgaaaggacagctgttatcgcgcttcctggaggaattggtaccctcgacgaggtttttgagatcatggctttgattcaactcgaacgaattggctctcaacttcctgttcctttgcttctaatgaactatgattcattttataccaatttgttggagttcctcaatgattgtgagaagtggggaactgtctctaagggtgaagttgaatcattgtggaaaatttgtaccaataactcagaagctttggattatttggctgaattttatggtctttctactatacaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184E04-z8xSb/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0184E04.1" temp_strand="+" temp_description="C07HBa0184E04.1  AC212637.1 htgs_phase:1 submitted_to_sgn_as:gi|158262132|gb|AC212637.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0184E04, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="52702" stop="57090"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53002" g_stop="53260" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="276" r_length="259" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53261" i_stop="55549" i_length="2289">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.810" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55550" g_stop="55678" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="405" r_length="129" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="55679" i_stop="56037" i_length="359">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="56038" g_stop="56222" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="406" r_stop="590" r_length="185" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="56223" i_stop="56447" i_length="225">
            <donor d_prob="0.667" d_score="1.00"/>
            <acceptor a_prob="0.485" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="56448" g_stop="56790" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="591" r_stop="933" r_length="343" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184E04.1" gen_strand="+" ref_id="SGN-U322999" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>916</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184E04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U322999" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53002" e_stop="53260"/>
          <exon e_start="55550" e_stop="55678"/>
          <exon e_start="56038" e_stop="56222"/>
          <exon e_start="56448" e_stop="56790"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATATTGTTTCCAAGTTGAGAGCTTTGTTCCCTCTATTGAAAAAAATGGGGTTTGCTGCAGATAGTACCATTTCAATGGCTAATATCTTTCTAAGAAGCTCTCATCATCATAAGAAAGATGTAAATTTGGGGTCTTGTATGAGAAAGGAAACATGGGGTTTTAATCTTTACTTGCCAAAGCTCAAGTACCAATCAAGAATCTCATTTTGTTGCAAGAATGAATCAATTGATTTTGAAGAAAGAACAAGTCCTAATGAGGTAATAGATTTTATGACCCATTTCTTGTTTTGTTGGGTAATATTAGCAGATGCTTATGCTTTGTTTTAGTCCCAATTTGTGTAGTAAAAAGTGGGTTGAAGTTTCCAACTTTGAAAATTGTCAGATGTGAAAAAGAGAAAATTCCCATTTAGTTATCTATTTAGCTGCTGCATATGCTTTGTTTTTGTCTGTTGTCATGTGATCAGGAGTTCACCGGTTCGAAGAGTAAGCCTTGGACCCTGTGCATAGCGGGAGCTTAGTGCACTGGGCGGCTCTTCCTTATATGCTTCATTTTGTCTCAGTTTGTGTAAATATAAGTAAATATTGGGTTTAGTTTTTAGCTTTGGGACTTGTCAAAAGGCAGAGAAGGAAAAAAAATCTATTTAGTTGCTGCAAAGGCTTTATTTTGTAGCAATTTGTGTAAATTTAAGTAGAAATTGGGTAAAAGTTTCAAACTTTGTAACCTGTCAAAACGAAAAGAAGAAACAAAAGGTTCTAACTTTGGATGTTCAATGTGATTTTTGGATTGATGCAAACTTGGATTTTGTTTTGAAAATTTCAAATTTTGAGGACATTATGATCTCATTTTACACAAAAAGATGCTAACTTGGGATTTTGACGTGGGAAATTTATAATTTATATATTCAAATCTCGTTCGTATTGTTGTTTGAGAACCCATGAGTTGAAGAGACTATGTGCCTGTTGTCTTGCAGAAAAGAAAGAACAAGTGAATCCTAACTGAGGTTTTCAGTACTAAGAAAGATTTATGCTGCAATGTTAGATTAGTGATTAAAGAAGCTGCTAGCAGTACAAGATTGGAGATACTCTCTACCTTCACGCTATTCGCTCACTTTGTCAAAAGGAAAAATCATACGAATTTATCTCATTTTCGGACTTATAAGAAAGAGATTTTATCTGTATCTTTGTGTAAGTACTTTAACGTGCACAGGTTGAGTGTGGAGTGGGATGATGACTTAAAAATTTCGAGTCTTCTGAGTGGTGATAGGAGTAGAAGATATCTGGAGGCCTTTGTAGTGTGGTGGCCCCTTTACTCTTATGTTGTAAAAGGGAAGTGCATATTTGAGATATCTAGATGCTTTAAGAAACTGCTTCAGTGCCAGCAAGAAACAAGCACCACTCTTGCTAGATCAAACAAGCGATTATTGTTCCTTTATTCGTAATTCCTCCCATGGACCACATTAGGATCTTATGCACCTATACCATTACTTTATGCTTAGGTTAAAAGATTTAATGATATCATCGCTAGTATTTAAATCAGCCATCAATTACAGGTAGCTTGAAAGGAATGGCATATAGGCTGGCATCGGATACTGTTAGCTAAGTACCTAGGGGGAGAAGTACATGAATGGAAGTTGTTCAAACTAGCATATTGGAAGAACCATTAGCTAAAATGACCATAGGCCTCATTGGTGTCCAGATAGAGTCCTATTTTTCTCAATTTCGAAAGTGTTTATTAAATTTATCCATCTTTTCAAGAACATGCTTCCTCTGAAATGAAGAAGGAAAACTGGAAAGAATTCAATGTGAAACACCACGATCATTTGTTTGTGGATTGGAGAAAGTATCTTCATTCTGTTTTCCCAAGTTATATTACATTGTTGATGCAGCTCACTTTGGACTAAATAACTAACAAGTGATATATCGCGACAATCAATCAGTTGTTTACGTCTAGCAGCATTCTTCCATTAGTTTACTTGCCCTTACCCATTCTATCCTCCAGAAAAAGGAAAGATTGAATAATGGCTTTTCTTCGTCTTTTCAATAAGACGAGTTCTGATTCCTTTTTACTATTTGGAAGCATTGCAAACGGTCAAGATTGTTGTTGTTTGCATCCTTTATCTTGGTTACATGATTTTCGGTTCAAAGGAATCTAGTACTCCCACCACCTTTTCTTCTTTAACGTTTGCTGATGTAAGACTAATTGACGCCTAACAGCTGAATAGCTCAGCATGGACTCAGCTTGATTAGACGTGAAGAACCTATATGAGAAGCTATGCACCATGTCTATATTTGACTGGTTAGTGGTGGAAGCTTGAGAATCACATGCTTCCAGTCAAGTGCTTCTTTAGTTTTTAGATATAGCAATCAGTCACTAAATTATGTTTGGTTACTTTCAATGACATTTACTCTGTGTGAATTGTTAAATATCTGAGTTTTTAACACACAGTTTTCTTTTAGATGCATTGCTGCTTTACTTTTATTGCATCTCGGTTACACAAGATATCTGGTTTTGAGGTTTTTGAGACTAACAATCTGTTGAAAATGCAGGTCAAGAAAGAGATAGAGCAATGCTATGAATTAATACACAGGCTTGGTCGTGGTGTTGTGTATTTAGGATCTTCAAGGATTGGTCCTGGACATCCACACTACATAAAAACCTTTGAATTAGGGAACAAGGTTAGTCAACTTTCTCAAAGTTTGGGTGAAGTAATAGAAAAAGAAAGATGAAGTAGCTTGTATAAAAAAGTACTCCCTCCGTTTCGATTTTCTCTGATTTTGACTTACGCGGAGTTCTAAGAAAGTGAAAAAGGACTTTCGAATCATGTGGTCTTAAACTAAAGATATGTAGAATGTACCATGTCCTTCAATGTTTTGGTGAATATGCCTCGTGAATTAATGAGTTACCAAAAAAGAAAAGACATTCTTTTTTAGACGGTCTAAAAGGAATGTAAGACAAACAAATTAAAACGGAGGACATAATACTATTCGGAGAAGAATCTGTGACTATTGTTTTCTAAATACTACTTGTTCGGCAGATTGCAACTCTATTAGATTGTACGACATGGTCCGGGGCTGGGCCAGGCTTAATGGATGCTGCCACACAAGGTGCTCTACAAGCAGGGAAGCCCGTTGGCGGGTTCAAGATAGGTAAAGAAGCAGGGGAATGGACAGCTACAAATTTTCATCCATACTTACCATCAGAGAGTTATCTTACATGCAGGTAAACATAGCATCAAATGCATGGTTTTTCCTATGTTCTTAGGGGCCGTTTGGTTGTAAGCTGGTAACCAAGCACCATACTTGGTGTGCCGAATTTCATACATAACAATTAAAATGCTACCAAACATGTCATTCGTTTCTTACACGAATAATTCACTTCGTGACCAGCAGTCAAAGGGAGAGTCCCCTTATAGCTTCTTGAGTTCATCAACTGTTTTGCACTCAGGTTTTTCTCCGCAAGGAAACACGGGCTGGTGGATGCTGTTGTGAGATGTAGAAGCTCTGAAAGGACAGCTGTTATCGCGCTTCCTGGAGGAATTGGTACCCTCGACGAGGTTTTTGAGATCATGGCTTTGATTCAACTCGAACGAATTGGCTCTCAACTTCCTGTTCCTTTGCTTCTAATGAACTATGATTCATTTTATACCAATTTGTTGGAGTTCCTCAATGATTGTGAGAAGTGGGGAACTGTCTCTAAGGGTGAAGTTGAATCATTGTGGAAAATTTGTACCAATAACTCAGAAGCTTTGGATTATTTGGCTGAATTTTATGGTCTTTCTACTATACAA</genome_strand>
        <mrna_strand>ATATATTGTTTCCAAGTTGAGAGCTTTGTTCCCTCTATTGAAAAAAATGGGGTTTGCTGCAGATAGTACCATTTCAATGGCTAATATCTTTCTAAGAAGCTCTCATCATCATAAGAAAGATGTAAATTTGGGGTCTTGTATGAGAAAGGAAACATGGGGTTTTAATCTTTACTTGCCAAAGCTCAAGTACCAATCAAGAATCTCATTTTGTTGCAAGAATGAATCAATTGATTTTGAAGAAAGAACAAGTCCTAATGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAGAAAGAGATAGAGCAATGCTATGAATTAATACACAGGCTTGGTCGTGGTGTTGTGTATTTAGGATCTTCAAGGATTGGTCCTGGACATCCACACTACATAAAAACCTTTGAATTAGGGAACAAG.......................................................................................................................................................................................................................................................................................................................................................................ATTGCAACTCTATTAGATTGTACGACATGGTCCGGGGCTGGGCCAGGCTTAATGGATGCTGCCACACAAGGTGCTCTACAAGCAGGGAAGCCCGTTGGCGGGTTCAAGATAGGTAAAGAAGCAGGGGAATGGACAGCTACAAATTTTCATCCATACTTACCATCAGAGAGTTATCTTACATGCAG.................................................................................................................................................................................................................................GTTTTTCTCCGCAAGGAAACACGGGCTGGTGGATGCTGTTGTGAGATGTAGAAGCTCTGAAAGGACAGCTGTTATCGCGCTTCCTGGAGGAATTGGTACCCTCGACGAGGTTTTTGAGATCATGGCTTTGATTCAACTCGAACGAATTGGCTCTCAACTTCCTGTTCCTTTGCTTCTAATGAACTATGATTCATTTTATACCAATTTGTTGGAGTTCCTCAATGATTGTGAGAAGTGGGGAACTGTCTCTAAGGGTGAAGTTGAATCATTGTGGAAAATTTGTACCAATAACTCAGAAGCTTTGGATTATTTGGCTGAATTTTATGGTCTTTCTACTATACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QPbVQW/lycopersicum_combined_unigene_seqs" ref_id="SGN-U322316" ref_strand="+" ref_description="SGN-U322316        Tomato 200607 #1 [8 ESTs aligned] arabidopsis/peptide: | Symbol: None | similar to mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein [Arabidopsis thaliana] (TAIR:At4g26670.1); similar to Unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAN59775.1); contains InterPro domain Mitochondrial import inner membrane translocase, subunit Tim17/22 (InterPro:IPR003397) | chr5:22503652-22505241 REVERSE | Aliases: MTE17.23, MTE17_23(evalue: 7e-62, score=234) genbank/nr: gi|50897226|gb|AAT85752.1| At5g55510 [Arabidopsis thaliana] >gi|46931218|gb|AAT06413.1| At5g55510 [Arabidopsis thaliana] (evalue: 5e-60, score=234)">
      <seq>aaatatcttagaacttttagattgacaaaacttagggtttagcatttggaaattgagaatggcgacgccgacgacctcaccgaactctgaatccgattccgacgttgaaacaagtccggtggcgaacccgtcacccggacagaatcctcaattcacctctgatgcgttaaccactgcgattccgtctactccagtcgtatgcctccttaggttcgccggtgactctgctgctggagccttcatgggatccattttcggatacggctcaggattaataaagaagaaaggttttaaaggatcctttggggaagcaggagcttcggcaaagacttttgcagttttatcaggagttcatagtttagttgtctgtttcttgaagagaatacggggaaaagatgatgttatcaatgctggagtagctggatgttgcactggtcttgccctaagttttccaggtgcacctcaggctctactacagagttgtctcacctttggggcattttctttcatcatcgaaggtcttaacaagcagcaacctgcattagctcttacatctcacatgaatgtcaacagtagacagcaatttggtgtgcttgctcctttatctctacctctaccaaatgagctcaaggaatccttttcattcttctgccagtcccttaaaaatcgtcgacatggctcccgttagatagtgaagaaatgcaaaaaaatgtcgttttcaaccatttggcactattatcaagttttgtaaattgtaatcgacttacctttatcctgctttaagagtgataattcttgctgtgtctcttttattaatacaaaacaattttgcaagggactataattttctccttgaaggttcatatccattttcatggtgaattgtttcttaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184E04-z8xSb/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0184E04.1" temp_strand="-" temp_description="C07HBa0184E04.1  AC212637.1 htgs_phase:1 submitted_to_sgn_as:gi|158262132|gb|AC212637.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0184E04, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="66300" stop="62481"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66000" g_stop="65738" g_length="263"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="263" r_length="263" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65737" i_stop="64711" i_length="1027">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64710" g_stop="64646" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="264" r_stop="328" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64645" i_stop="64520" i_length="126">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64519" g_stop="64447" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="329" r_stop="401" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="64446" i_stop="64374" i_length="73">
            <donor d_prob="0.358" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="64373" g_stop="64320" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="402" r_stop="455" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="64319" i_stop="63218" i_length="1102">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="63217" g_stop="62780" g_length="438"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="893" r_length="438" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="894" polyA_stop="908"/>
      <MATCH_line gen_id="C07HBa0184E04.1" gen_strand="-" ref_id="SGN-U322316" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>893</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184E04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U322316" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66000" e_stop="65738"/>
          <exon e_start="64710" e_stop="64646"/>
          <exon e_start="64519" e_stop="64447"/>
          <exon e_start="64373" e_stop="64320"/>
          <exon e_start="63217" e_stop="62780"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATATCTTAGAACTTTTAGATTGACAAAACTTAGGGTTTAGCATTTGGAAATTGAGAATGGCGACGCCGACGACCTCACCGAACTCTGAATCCGATTCCGACGTTGAAACAAGTCCGGTGGCGAACCCGTCACCCGGACAGAATCCTCAATTCACCTCTGATGCGTTAACCACTGCGATTCCGTCTACTCCAGTCGTATGCCTCCTTAGGTTCGCCGGTGACTCTGCTGCTGGAGCCTTCATGGGATCCATTTTCGGATACGGTAATTGTTTATGCAATTTTCTCCCTTAATCTGTCTATTATCGACGAGTTAATAGTTTGAATTTGGTTAGTTTGTTAGTTCAGCTGGATTTTTTGTGGAAATAGCTGAAATGAGTTACTTCTGATTGTTATTTTCGTTTGTTTTCTATACGGAGTTATCTAGAACTTATTCTTTTGTTGTTTTATGCATTTTCCTCCGCCAATATGTCTATTGTCGACTCGTTAATAGGTGCAATTTGGTTAGTTTGTTAGTTCAGCTGAATTTTTTGTGGAATAGTTGAAATGAGTTACTTCTGATTGTTAATTTTGGGATTGTGTTCTCTACGGAGTTATATGAAGCTTATGTTTTGTTGTTTTATGCATTTGACAACCGATGTCTTTTACCAGTTGTAGATATTCGTAGTAGAATTGTGTATCAACCTGTTACCTGTGTAGTGCTGCAGCTGACCTGATATAGCAGTTTTATGTTCACCTTCACCAGTTTGTTTGTTGGAGTCTCACAGTCTCTCGGGAGACGAATCTGTGCTTTTGCAAATTATTATATTTGGCTCTATTGCTATAGTCTGTTTCTCACTCGTGTATGATTGTTGGGGGGTGTACATGAACTATAGTTGTGTATATTAGTACATTATGAGTGTGACAGGAGGTGAAGGCTTCTCTGAATTCGACTACTGATTTCTCGTATCTTCTTCATCCTTTATTTTGTTTGATGACTCACTACAATAACTGAGTTGTGCGTTATCCTTTTATGGTAACCTCTAGTTTCTCCAAGTGTAATGAGCGTCAACCGCCCTATATTTTGAAGTTGTTTGTTATTTCTTCTGTTTGTTTGTCTAGTCCATATTTCCTTTAACAAATAACATCCTTCTGTTGCTACTGCCGACCTTGCATTTCGGGGAACCCTTCTTTCAATACTTTGCTTCTATAAGATTAAATAGCTTCTGGGGATCATAAATGGAATTCTTTGAGTGCAAGGGAAACATTATAAGTTGGTGATGTGCTCAATTTTGCTCAATGTGCTGTTTCAGGCTCAGGATTAATAAAGAAGAAAGGTTTTAAAGGATCCTTTGGGGAAGCAGGAGCTTCGGCAAAGGTATTTCAATCTTTGATCAATGCCTTAATGATATTTTTGGCAAACTACAGTATAACCACTGTTACTGCTTCCCTCTTTTAATATGTCTAATTGTGACTTGGTTCATTTCCCCTTTCTGTTGTCTAGACTTTTGCAGTTTTATCAGGAGTTCATAGTTTAGTTGTCTGTTTCTTGAAGAGAATACGGGGAAAAGATGATGGTATGACACACACTTTGAACAGCCAGATTCGGAAACATCTTTTATTTTCATTGACTTTCTCTTCTTTCTACAGTTATCAATGCTGGAGTAGCTGGATGTTGCACTGGTCTTGCCCTAAGTTTTCCAGGTACTTCCAACATTTCCCACTTCATAACATAATTATCAGGACTATACCCTCCATTTTTGATTCTCAATTCCTTGAAGTCTTCTTAATTGCCATCTTACGCATTGATTAAAATGATGTTAGTACCCAATCAAGTGTAGATAGAAACAAGTACTGTCATGGTTACACATGTTTGCTGTGTTAGTGTGCCCCTTCAAACCTGAATAAAGCCATGAAGTCTAATTGTATTCATTTGATAATTGTGCAAATGGTGTAAACTTCTGTGATTATTATCGTTAGCTTAGTGTCTTCTCTAACTATCATTGTCAGTCCCAAACCTACAGTCCTTCTTTGCGGCAATATCTGAATTGGTTGGGAGAAAGTAGCATACGACTTACATGACAAATTTAAGGAGGTTTTCAGGTAGTTGTGTGGTGGTTATGGGGCATGTCATGGAAAAATTGTGCTTAACTCATTTTTTAAGAGCACAATTTAGCCTGCTAGAGCTAATAAGACCTACACTTGATGCATAAATGGAGAATTTTTAGGGCTGCAAATAATAGCTTCGGATTCTGGTTAAATAAGGTGGGAATCTGGGAGATATAAAGATGTTACCAGTCTCACCCCCATAATGAATTGGAAAAATGTGTTCGGATTAAGAGAATATGAAAGCAAGGATGTGAAAAAGTAAAGATGAGCAGGAAGGGGTGGGTGTTACAACTGTGTCTTTCCAACATGTAGATTTTTTCCAGCATGTCATTATCGTACCCATGACTAAACTCAAAAAGCAAATAGCTAGATTGGGTGATATTCATGTATTTCAACAATGTCGTGAAGTGCATATAAGTTTCAGTTATGAATTTAAATTCTCCTTATCTGCTTTATAGAAGCATCTTTCTTTGTTTTCTTTGAGTTCTTGCTTCTTGTTAAATTATATGCAAGTTCATGAAGTGCTGCTCATAGTAAGGTTTCTAATTTTCTATATTCGAAATTCTTAACCTCATTCTCGTTTAACTTGTCTAGTCATTTTTCTCTCCTCATTCAATTGATTGCGCTAGAATGTTTGTCATTCCTTATAGTGAACTAGAGTTATAATTAGTCTTTCTTTGTTGATGATGCGTCTCAGGTGCACCTCAGGCTCTACTACAGAGTTGTCTCACCTTTGGGGCATTTTCTTTCATCATCGAAGGTCTTAACAAGCAGCAACCTGCATTAGCTCTTACATCTCACATGAATGTCAACAGTAGACAGCAATTTGGTGTGCTTGCTCCTTTATCTCTACCTCTACCAAATGAGCTCAAGGAATCCTTTTCATTCTTCTGCCAGTCCCTTAAAAATCGTCGACATGGCTCCCGTTAGATAGTGAAGAAATGCAAAAAAATGTCGTTTTCAACCATTTGGCACTATTATCAAGTTTTGTAAATTGTAATCGACTTACCTTTATCCTGCTTTAAGAGTGATAATTCTTGCTGTGTCTCTTTTATTAATACAAAACAATTTTGCAAGGGACTATAATTTTCTCCTTGAAGGTTCATATCCATTTTCATGGTGAATTGTTTCTTAG</genome_strand>
        <mrna_strand>AAATATCTTAGAACTTTTAGATTGACAAAACTTAGGGTTTAGCATTTGGAAATTGAGAATGGCGACGCCGACGACCTCACCGAACTCTGAATCCGATTCCGACGTTGAAACAAGTCCGGTGGCGAACCCGTCACCCGGACAGAATCCTCAATTCACCTCTGATGCGTTAACCACTGCGATTCCGTCTACTCCAGTCGTATGCCTCCTTAGGTTCGCCGGTGACTCTGCTGCTGGAGCCTTCATGGGATCCATTTTCGGATACG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAGGATTAATAAAGAAGAAAGGTTTTAAAGGATCCTTTGGGGAAGCAGGAGCTTCGGCAAAG..............................................................................................................................ACTTTTGCAGTTTTATCAGGAGTTCATAGTTTAGTTGTCTGTTTCTTGAAGAGAATACGGGGAAAAGATGATG.........................................................................TTATCAATGCTGGAGTAGCTGGATGTTGCACTGGTCTTGCCCTAAGTTTTCCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCACCTCAGGCTCTACTACAGAGTTGTCTCACCTTTGGGGCATTTTCTTTCATCATCGAAGGTCTTAACAAGCAGCAACCTGCATTAGCTCTTACATCTCACATGAATGTCAACAGTAGACAGCAATTTGGTGTGCTTGCTCCTTTATCTCTACCTCTACCAAATGAGCTCAAGGAATCCTTTTCATTCTTCTGCCAGTCCCTTAAAAATCGTCGACATGGCTCCCGTTAGATAGTGAAGAAATGCAAAAAAATGTCGTTTTCAACCATTTGGCACTATTATCAAGTTTTGTAAATTGTAATCGACTTACCTTTATCCTGCTTTAAGAGTGATAATTCTTGCTGTGTCTCTTTTATTAATACAAAACAATTTTGCAAGGGACTATAATTTTCTCCTTGAAGGTTCATATCCATTTTCATGGTGAATTGTTTCTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QPbVQW/lycopersicum_combined_unigene_seqs" ref_id="SGN-U343900" ref_strand="+" ref_description="SGN-U343900        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | kinesin motor family protein, contains Pfam domain, PF00225: Kinesin motor domain | chr3:7031418-7036505 FORWARD | Aliases: MAL21.18(evalue: 0, score=758) genbank/nr: gi|27462172|gb|AAO15358.1| kinesin related protein [Lycopersicon esculentum](evalue: 0, score=2071)">
      <seq>cttagttagaatgtcagaaaacagattcttaggcaacatttctgcgtcttcgttccgaaatctacttccaaaatcagtttcaactaagaaaaagttgagttcaagtagatttaagcataaaatgaacagtgaaaatgttgctcctatagatcccaacgttcagatcagtgatccaccgttgttacctacgagttcgatacttaaaaaaaccgtcttgaagacgattgatagtgatgtatcgacagaactcaccagatctgttgcacaggaacaaacatcagaagctcctgatccaccagttaaggttgttgcaaggattagacctgctaatggtattgagagtggaacccaagcggttcgcaaagcttctgatacctcagtgtgtgttgctgatagaaagtttgactttgacatggtttttggttcaaattcgaatcaggaagatgtatttcaatcggttggtgcccctttagttaaggatgcattggcaggttacaacacttctctcttagcttatggacagactggaagtggcaagacttatacaatgtggggacctcctagttccattgttgaagttccatcacctaatggtcttcaaggcattgtgccgcgcatttttcagacattgttttctagtatacaaaaagagcaagagaactctgaaggtaaacagataaattaccagtgtcgttgctcgttcctagagatatatgatgaacacattggggatctacttgatcctacacagagaaacttaaagataatggatgatccaagagttggattctatgttgagaacataactgaggaatatgtgtctacctacgaggatgtatcacaaatgttgattaagggtctttcaagtagaaaagttggatcaacgagcatcaattcgaagagttctaggtcccatattgtttttacctgcgtcattgagtcctggtgcaaggagtcctcatcaacgtgttttggtagctcaaagatgagcagaatgagccttgttgatcttgctggatttgacaaaaatatacctgatgatgccggtaaacagcttgttaaggaagggaagtatgtaaagaagtccacatcactgctcgggcatttggttaatgtcctctctgaaaggagtcagtccaggaaacttgaggatgtttcgtacagcagttccactttgactcatttaatgagagaatcacttggtgggaatgctaaactctccgtcatatgtgctatcagcccagaaaacaagcataatagtgaaacagtaagcactctgagatttgggaaacgggttaaactcacaccaaatgagccattggtaaatgaaataacagaagacgatgttaatggcctgagtgatcagattcgccaattgaaggaagagcttataagagctcggtcaagtgcaagcatttcagtcggaagcaactatggatccttcagaggaccaaatgtacgtgaaagtttgaatcagttgagagtgagccttaaccgttcactcatcttacctgacatatataatgagcgtgaagaagaagaggttcacataaatgaggatgatataaaagaactacagctccagatcaataacttacgtggttcacgtggaaataactcaaactctctcaagtattcatctggagaaagtgaacactatctcagctgttcagaagaaagtgaaggtgaagaaattaactcagatgagatactggaggagacccttgatgatgctgaccaagagatggaaacgatgcagcctgaatactgtagcagcatctcaataggcccatcccgccattctgctgatcttcctggcccggtgttatctgagtccccaaagtttcggaacatgcagaggaagagcttaattatctccggtgaagataatattcaaaggtccttcaaaagttctgaattggctttcctggcacagaaaccagaccttgtccagtcttctttgaggtccagcagaatatttcctgggccaactgaatccttggctgccagtctacatagaggactagagatcattgattatcaccaaaggaattccgcatcaaataaatctttggtttccttctcttttgaacatttggcagtgaacccaagcccaatgtcaaatggtaaggccaatgcttctattcaaacatcatcggaagagggacaatcttctccttttgtagccgctacattcctgtgtccaaagtgcaagacgaaagcaacatcctctagtgttgttaaggatagcactgggacatggatggtttccatggaagggacaagtacggatcaagattcggagaaagttttgttccaagctctagagagagagaagcagcttgaaagtgtatgcaaggatcaagcagacaaaattgagcagctaaaccaacgactagcccgctgtaagtgcacacaagaacagagttctttagttgattgtggcaaggatgtcgttgatctccacgacaatgagaatcaagcttcaataatctatcagaatgggagtcaatcacccaacatcccaaagctcctgaaatgggacgatgaaagtcctgagcctgaagctgcaggagagaagtatgaaactaaagaaattcagggcaatgtcgaaaacagtggcgggaaaaaaatgtttgatatggctgagagagaagcactacttaaagaaattggaggcctaagggcccaattgaagtcagatggagcctccacaaacaaatcacttgaaagaaccagatcctctttgttagcacaatcaatgcagctgagaaaaagtggtgtatatgctactacgggttctggtgaagaacttgagaaggaaagagaaagatggactgagatggaaagtgagtggatttgtctaactgatgagcttagaattgatcttgaggcttatcgccagcgtgcagaaaaggtggcaatggaattaatgttggagaagaaatgcacggatgagttggatgatgccctcaaaagatccgtctttgggcaagccagaataattgagcattacgcggaattacaggagaagtacaacgacttagctgagaagcataagttgatcttgcaagggatacaagatgtgaaaaatgctgcagcaaaagcaggaaagaaaggccatggtgctcgtttcgccaagtctctcgctgcagagctgtcagctttgagagtggaaagggaaagagagagggaaatgctgaaaaaggagaataaaagcttgagagttcaacttaaagacactgctgaagctgttcatgcagccggagaacttcttgttagattgagagaagcggaggaaacagcttcacttgctgaggagaactttacacaatcaaaggaagagaatgagagattgaagaagcaaatagagaagctgaagagaaaacataagatggagatgataacaatgaaacagtatcttgctgaaagccgattgccagaagcagcgttgagaccgcctatttacaggcaagactctgatgtagcaaacaatgacaacaacaacaccatccaacattctgagtatgatgatgatcaatcatggagagcagaatttggcgctatttatcaagaacacatatgagccatgtttgattgaactatggaaacacgtgaagaccctgctcgggactttgctgaaaaaaacctgctcatcttgatcacaccttagtgttattcagggatgaattggctgtattcttattgattttatcattcttttgaaacttgattgaccagatttgacatttgttgtgagctgtttcttcagcttgttaataataatgcttatgtatcctaaaaagtcattcaactttaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184E04-z8xSb/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0184E04.1" temp_strand="-" temp_description="C07HBa0184E04.1  AC212637.1 htgs_phase:1 submitted_to_sgn_as:gi|158262132|gb|AC212637.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0184E04, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="73071" stop="66273"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72771" g_stop="72466" g_length="306"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="304" r_length="304" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72465" i_stop="72227" i_length="239">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72226" g_stop="72092" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="439" r_length="135" r_score="0.985"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72091" i_stop="71617" i_length="475">
            <donor d_prob="0.984" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71616" g_stop="71533" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="440" r_stop="523" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="71532" i_stop="71450" i_length="83">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.823" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="71449" g_stop="71324" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="524" r_stop="649" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="71323" i_stop="71241" i_length="83">
            <donor d_prob="0.869" d_score="1.00"/>
            <acceptor a_prob="0.682" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="71240" g_stop="71181" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="650" r_stop="709" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="71180" i_stop="71098" i_length="83">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="71097" g_stop="71044" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="710" r_stop="763" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="71043" i_stop="70948" i_length="96">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="70947" g_stop="70855" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="764" r_stop="856" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="70854" i_stop="70724" i_length="131">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="70723" g_stop="70628" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="857" r_stop="952" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="70627" i_stop="70447" i_length="181">
            <donor d_prob="0.859" d_score="1.00"/>
            <acceptor a_prob="0.792" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="70446" g_stop="70298" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="953" r_stop="1101" r_length="149" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="70297" i_stop="69958" i_length="340">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="69957" g_stop="69808" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="1102" r_stop="1251" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="69807" i_stop="69587" i_length="221">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="69586" g_stop="69457" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="1252" r_stop="1381" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="69456" i_stop="69366" i_length="91">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="69365" g_stop="68451" g_length="915"/>
          <reference_exon_boundary r_type="cDNA" r_start="1382" r_stop="2296" r_length="915" r_score="0.992"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="68450" i_stop="68358" i_length="93">
            <donor d_prob="0.911" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="68357" g_stop="68259" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="2297" r_stop="2395" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="68258" i_stop="68171" i_length="88">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="68170" g_stop="68036" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="2396" r_stop="2530" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="68035" i_stop="67947" i_length="89">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="67946" g_stop="67158" g_length="789"/>
          <reference_exon_boundary r_type="cDNA" r_start="2531" r_stop="3319" r_length="789" r_score="1.000"/>
        </exon>
        <intron i_serial="15">
          <gDNA_intron_boundary i_start="67157" i_stop="67073" i_length="85">
            <donor d_prob="0.895" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="16">
          <gDNA_exon_boundary g_start="67072" g_stop="66562" g_length="511"/>
          <reference_exon_boundary r_type="cDNA" r_start="3320" r_stop="3830" r_length="511" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="3831" polyA_stop="3841"/>
      <MATCH_line gen_id="C07HBa0184E04.1" gen_strand="-" ref_id="SGN-U343900" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>3832</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184E04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U343900" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72771" e_stop="72466"/>
          <exon e_start="72226" e_stop="72092"/>
          <exon e_start="71616" e_stop="71533"/>
          <exon e_start="71449" e_stop="71324"/>
          <exon e_start="71240" e_stop="71181"/>
          <exon e_start="71097" e_stop="71044"/>
          <exon e_start="70947" e_stop="70855"/>
          <exon e_start="70723" e_stop="70628"/>
          <exon e_start="70446" e_stop="70298"/>
          <exon e_start="69957" e_stop="69808"/>
          <exon e_start="69586" e_stop="69457"/>
          <exon e_start="69365" e_stop="68451"/>
          <exon e_start="68357" e_stop="68259"/>
          <exon e_start="68170" e_stop="68036"/>
          <exon e_start="67946" e_stop="67158"/>
          <exon e_start="67072" e_stop="66562"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTAGTTCAGAAATGTCAGAAAACAGATTCTTAGGCAACATTTCTGCGTCTTCGTTCCGAAATCTACTTCCAAAATCAGTTTCAACTAAGAAAAAGTTGAGTTCAAGTAGATTTAAGCATAAAATGAACAGTGAAAATGTTGCTCCTATAGATCCCAACGTTCAGATCAGTGATCCACCGTTGTTACCTACGAGTTCGATACTTAAAAAAACCGTCTTGAAGACGATTGATAGTGATGTATCGACAGAACTCACCAGATCTGTTGCACAGGAACAAACATCAGAAGCTCCTGATCCACCAGTTAAGGTAAAATGATAAATCTTTGCTGATTTTAGTTAGGTGGTCGAGGAAAGAGGTGAATTCAGGATATAAACTTAATACTGATATAATTATGGGTTCAAATCTAGTATTTATTGAGATTTCAATAGGGTTTTATGGACTGTGGGTTTGTCTATTTCCTTGTTTTGCTAAATTTCTTCCATTTTTGTTGTGCTTTTTGAGCTATGAATGATCTGTAATTGCTCTGTATGTTGGGTGTTTGACAGGTTGTTGCAAGGATTAAACCTGCTAATGGTATTGAGAGTGGAACCCAAGCGGTTCGCAAAGCTTCTGATACCTCAGTGTGTGTTGCTGATAGAAAGTTTAACTTTGACATGGTTTTTGGTTCAAATTCGAATCAGGTTGGTAAATTTAACTCCCAAGTTTCTGCCTTTTCAAGCTTTTTTGAATTAATTGTGCTTTTAGATGGTGCTTAGTTCTTTTGGTGTCCACAGTCCTTTTCATGTTAGTTTCTGATGTTCGTAATTAAGGAGGGGGGACTTTGCTTAGAGTTGAGCGATGGAAGACAATAGAGGCAATAGCTTATAGTGACTAGTTAGAATTGATTTAATCGTTGTTACGCTTACATTAGGTCAAATAGAGGTAAGTGAGTGATCTAGACAGAATTATTAATATATAGAGAAGTATTAAATATACCTGAAGAGATCCAAACAGAATTATTAATATATAGAGGGATACATATAGTCCACCCCTACTAGTTTGGATCAAGGCTTCTTTGGTTTCATTAAAAAGGGTCTGATTTGTTGAATGCTGATGTTACAAGGTTCATATAATAGATGGATTTTTCTTATTTAAGCTGTTTTCTCATGATAACAGGAAGATGTATTTCAATCGGTTGGTGCCCCTTTAGTTAAGGATGCATTGGCAGGTTACAACACTTCTCTCTTAGCTTATGGACAGGTTAGTTTTACTTGTAATGTTTCATTTTCATTGTGTCACAATAAATCTGTATCTGATGGCTGAAGTGATTCTTTTGGTGATAGACTGGAAGTGGCAAGACTTATACAATGTGGGGACCTCCTAGTTCCATTGTTGAAGTTCCATCACCTAATGGTCTTCAAGGCATTGTGCCGCGCATTTTTCAGACATTGTTTTCTAGTATACAAAAAGTAAGTTCCTTCTCCATTTAAAAGTTAGAACTGAAGACTGTCAAGACATTTCTGATATTTAGATAATTTCCTTGATTGATCAGGAGCAAGAGAACTCTGAAGGTAAACAGATAAATTACCAGTGTCGTTGCTCGTTCCTAGAGGTATGTATTCTAAATATTTACCCTTGCTCACATATGATGCATACTCGTGCCAAGTCTAATTATGTCACACTTCTTCTTTCCAGATATATGATGAACACATTGGGGATCTACTTGATCCTACACAGAGAAACTTAAAGGTTAGTTGCAAATCTTGGAACACGATATTGTTCTAGGCGCTATTCACTTTATGAAAAAACAGAATGCTGAAGATTCGTCCTTTTTGGTTATTCCAGATAATGGATGATCCAAGAGTTGGATTCTATGTTGAGAACATAACTGAGGAATATGTGTCTACCTACGAGGATGTATCACAAATGTTGATTAAGGTGCACAAACGCTTTTCCTATCATAATACTTTGAACTTTCTAGTAGTTCTGTCAATGCAATAAAATGAGATAAGAATGCTTTAGCTTTCACTTATCTTATTGTTTCTTATTCTTTTGCATTTGAATTGTAGGGTCTTTCAAGTAGAAAAGTTGGATCAACGAGCATCAATTCGAAGAGTTCTAGGTCCCATATTGTTTTTACCTGCGTCATTGAGTCCTGGTGCAAGGTATCTTCCAACTATGAAATCTGGTTTTTTGTGTGTTTTGTCAGGAAGAAATTTTATACATTCATCTTCTTATCTAACCCCGGAGTTCATATTACCGTCTAATTTCTCACTATAAAGTTTTATCGTCATAGTTGAAGACCTTTAATCTTTTCAAGTGTCTAATTAAACAATATTACTTCAGGAGTCCTCATCAACGTGTTTTGGTAGCTCAAAGATGAGCAGAATGAGCCTTGTTGATCTTGCTGGATTTGACAAAAATATACCTGATGATGCCGGTAAACAGCTTGTTAAGGAAGGGAAGTATGTAAAGAAGTCCACATCACTGCTCGGGTATGATTTATGCATACATTTTACTGTTTGTTGTATATTGTAGTTTTTTGTCTTTGCGCTCAAACTTTCTTACATATTATATTGCCAACATTGTTGCCTTAAGTTTCAAAATGTTTGCATTCTCAAAGTGATGCCTTCATGCCGTATGCTAAGCCAAAAGTGTAGGCAGAGGACTTGATGAGTGACTCTAAGGAAGGAGTTAATAGTCTGTTCTGTTCATGAATTAGCTCATAAATGTTAAATCTACTTTAAAAAATGGCCATATTTTCTGTGAAATCTATTTATCATTGATGTATAACACAAGTGTTACTCTAGTTAATTGTTTCTTAAACTGGTGCAGGCATTTGGTTAATGTCCTCTCTGAAAGGAGTCAGTCCAGGAAACTTGAGGATGTTTCGTACAGCAGTTCCACTTTGACTCATTTAATGAGAGAATCACTTGGTGGGAATGCTAAACTCTCCGTCATATGTGCTATCAGCCCAGAAAACAAGTATTTCCCTTTTCAACTCGAGATGCTTCATGCTTTTCAATATTACGGAAATTCTGTTACCTATGACGTGCATGAAAAACTAGCACATTAGATGGTTAAAATTGTAAATGACTTTGGTGTAAGTGAACCTGAATGAGGGTCATATCATCTGGACCAACTTGCATACGTAACATCAGTTTCTTCTCTTTTAAATGTCACTAATTCGAGGAACATTTATGCAGGCATAATAGTGAAACAGTAAGCACTCTGAGATTTGGGAAACGGGTTAAACTCACACCAAATGAGCCATTGGTAAATGAAATAACAGAAGACGATGTTAATGGCCTGAGTGATCAGATTCGCCAATTGAAGGTACTTTCACTTGTCTCACTGGGGCAACTGCTCATCTGATTCGTTTAGAGCATAAACTTTATCTGACTTTATGCTTTTATATTGCTTACAGGAAGAGCTTATAAGAGCTCGGTCAAGTGCAAGCATTTCAGTCGGAAGCAACTATGGATCCTTCAGAGGACCAAATGTACGTGAAAGTTTGAATCAGTTGAGAGTGAGCCTTAACCGTTCACTCATCTTACCTGACATAGATAATGAGCGTGAAGAAGAAGAGGTTCACATAAATGAGGATGATATAAAAGAACTACAGCTCCAGATCAATAACTTACGTGGTTCACGTGGAAATAACTCAAACTCTCTCAAGTATTCATCTGGAGAAAGTGAACACTATCTCAGCTGTTCAGAAGAAAGTGAAGGTGAAGAAATTAACTCAGATGAGATACTGGAGGAGACCCTTGATGATGCTGACCAAGAGATGGAAACGATGCAGCCTGAATACTGTAGCAGCATCTCAATAGGCCCATCCCGCCATTCTGCTGATCTTCCTGGCCCGGTGTTATCTGAGTCCCCAAAGTTTCGGAACATGCAGAGGAAGAGCTTAATTATCTCCGGTGAAGATAATATTCAAAGTTCCTCCAAAAGTTCTGAATTGCCTTCCCTGCCACAGAAACAAGACCTTGTCCAGTCTTCTTTGAGGTCCAGCAGAATATTTCCTGGGCCAACTGAATCCTTGGCTGCCAGTCTACATAGAGGACTAGAGATCATTGATTATCACCAAAGGAATTCCGCATCAAATAAATCTTTGGTTTCCTTCTCTTTTGAACATTTGGCAGTGAACCCAAGCCCAATGTCAAATGGTAAGGCCAATGCTTCTATTCAAACATCATCGGAAGAGGGACAATCTTCTCCTTTTGTAGCCGCTACATTCCTGTGTCCAAAGTGCAAGACGAAAGCAACATCCTCTAGTGTTGTTAAGGATAGCACTGGGACATGGATGGTTTCCATGGAAGGGACAAGTACGGATCAAGTAAGTATGGAAATGGGTGGTTGTCTTTCTTTTATTAGCTAGATCATTCATTGTGAATGTTTAAGTTGAATGTTATTCTACCTTCTTTGGCAGGATTCGGAGAAAGTTTTGTTCCAAGCTCTAGAGAGAGAGAAGCAGCTTGAAAGTGTATGCAAGGATCAAGCAGACAAAATTGAGCAGCTAAACCAACGAGTAAGAGTTCTTTCACTCTAGTAATTTGTTTAAATATGACAGAAAATTACCTCAAGTTTGATATTAATTATGAATCTTGTCCTTGCAGCTAGCCCGCTGTAAGTGCACACAAGAACAGAGTTCTTTAGTTGATTGTGGCAAGGATGTCGTTGATCTCCACGACAATGAGAATCAAGCTTCAATAATCTATCAGAATGGGAGTCAATCACCCAACATCCCAAAGGTGAGCGCCGTTTTTAGCTTTCTTTTGTTAGAGTTGAGATTTTTCCTATTTTTTCTTATTATTTACTTGCGCCTTTTGGTTTGCTTCAGCTCCTGAAATGGGACGATGAAAGTCCTGAGCCTGAAGCTGCAGGAGAGAAGTATGAAACTAAAGAAATTCAGGGCAATGTCGAAAACAGTGGCGGGAAAAAAATGTTTGATATGGCTGAGAGAGAAGCACTACTTAAAGAAATTGGAGGCCTAAGGGCCCAATTGAAGTCAGATGGAGCCTCCACAAACAAATCACTTGAAAGAACCAGATCCTCTTTGTTAGCACAATCAATGCAGCTGAGAAAAAGTGGTGTATATGCTACTACGGGTTCTGGTGAAGAACTTGAGAAGGAAAGAGAAAGATGGACTGAGATGGAAAGTGAGTGGATTTGTCTAACTGATGAGCTTAGAATTGATCTTGAGGCTTATCGCCAGCGTGCAGAAAAGGTGGCAATGGAATTAATGTTGGAGAAGAAATGCACGGATGAGTTGGATGATGCCCTCAAAAGATCCGTCTTTGGGCAAGCCAGAATAATTGAGCATTACGCGGAATTACAGGAGAAGTACAACGACTTAGCTGAGAAGCATAAGTTGATCTTGCAAGGGATACAAGATGTGAAAAATGCTGCAGCAAAAGCAGGAAAGAAAGGCCATGGTGCTCGTTTCGCCAAGTCTCTCGCTGCAGAGCTGTCAGCTTTGAGAGTGGAAAGGGAAAGAGAGAGGGAAATGCTGAAAAAGGAGAATAAAAGCTTGAGAGTTCAACTTAAAGACACTGCTGAAGCTGTTCATGCAGCCGGAGAACTTCTTGTTAGATTGAGAGAAGCGGAGGAAACAGCTTCACTTGCTGAGGTAATTTTGCGTTTAAACATGGACACACACCGGTTTATACGTTAACTCATTGTTTTGATTAAACATTTCTTTACTTCTTTTACAGGAGAACTTTACACAATCAAAGGAAGAGAATGAGAGATTGAAGAAGCAAATAGAGAAGCTGAAGAGAAAACATAAGATGGAGATGATAACAATGAAACAGTATCTTGCTGAAAGCCGATTGCCAGAAGCAGCGTTGAGACCGCCTATTTACAGGCAAGACTCTGATGTAGCAAACAATGACAACAACAACACCATCCAACATTCTGAGTATGATGATGATCAATCATGGAGAGCAGAATTTGGCGCTATTTATCAAGAACACATATGAGCCATGTTTGATTGAACTATGGAAACACGTGAAGACCCTGCTCGGGACTTTGCTGAAAAAAACCTGCTCATCTTGATCACACCTTAGTGTTATTCAGGGATGAATTGGCTGTATTCTTATTGATTTTATCATTCTTTTGAAACTTGATTGACCAGATTTGACATTTGTTGTGAGCTGTTTCTTCAGCTTGTTAATAATAATGCTTATGTATCCTAAAAAGTCATTCAACTTTATGCACAAGTAT</genome_strand>
        <mrna_strand>CTTAGTT-AG-AATGTCAGAAAACAGATTCTTAGGCAACATTTCTGCGTCTTCGTTCCGAAATCTACTTCCAAAATCAGTTTCAACTAAGAAAAAGTTGAGTTCAAGTAGATTTAAGCATAAAATGAACAGTGAAAATGTTGCTCCTATAGATCCCAACGTTCAGATCAGTGATCCACCGTTGTTACCTACGAGTTCGATACTTAAAAAAACCGTCTTGAAGACGATTGATAGTGATGTATCGACAGAACTCACCAGATCTGTTGCACAGGAACAAACATCAGAAGCTCCTGATCCACCAGTTAAG...............................................................................................................................................................................................................................................GTTGTTGCAAGGATTAGACCTGCTAATGGTATTGAGAGTGGAACCCAAGCGGTTCGCAAAGCTTCTGATACCTCAGTGTGTGTTGCTGATAGAAAGTTTGACTTTGACATGGTTTTTGGTTCAAATTCGAATCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGATGTATTTCAATCGGTTGGTGCCCCTTTAGTTAAGGATGCATTGGCAGGTTACAACACTTCTCTCTTAGCTTATGGACAG...................................................................................ACTGGAAGTGGCAAGACTTATACAATGTGGGGACCTCCTAGTTCCATTGTTGAAGTTCCATCACCTAATGGTCTTCAAGGCATTGTGCCGCGCATTTTTCAGACATTGTTTTCTAGTATACAAAAA...................................................................................GAGCAAGAGAACTCTGAAGGTAAACAGATAAATTACCAGTGTCGTTGCTCGTTCCTAGAG...................................................................................ATATATGATGAACACATTGGGGATCTACTTGATCCTACACAGAGAAACTTAAAG................................................................................................ATAATGGATGATCCAAGAGTTGGATTCTATGTTGAGAACATAACTGAGGAATATGTGTCTACCTACGAGGATGTATCACAAATGTTGATTAAG...................................................................................................................................GGTCTTTCAAGTAGAAAAGTTGGATCAACGAGCATCAATTCGAAGAGTTCTAGGTCCCATATTGTTTTTACCTGCGTCATTGAGTCCTGGTGCAAG.....................................................................................................................................................................................GAGTCCTCATCAACGTGTTTTGGTAGCTCAAAGATGAGCAGAATGAGCCTTGTTGATCTTGCTGGATTTGACAAAAATATACCTGATGATGCCGGTAAACAGCTTGTTAAGGAAGGGAAGTATGTAAAGAAGTCCACATCACTGCTCGG....................................................................................................................................................................................................................................................................................................................................................GCATTTGGTTAATGTCCTCTCTGAAAGGAGTCAGTCCAGGAAACTTGAGGATGTTTCGTACAGCAGTTCCACTTTGACTCATTTAATGAGAGAATCACTTGGTGGGAATGCTAAACTCTCCGTCATATGTGCTATCAGCCCAGAAAACAA.............................................................................................................................................................................................................................GCATAATAGTGAAACAGTAAGCACTCTGAGATTTGGGAAACGGGTTAAACTCACACCAAATGAGCCATTGGTAAATGAAATAACAGAAGACGATGTTAATGGCCTGAGTGATCAGATTCGCCAATTGAAG...........................................................................................GAAGAGCTTATAAGAGCTCGGTCAAGTGCAAGCATTTCAGTCGGAAGCAACTATGGATCCTTCAGAGGACCAAATGTACGTGAAAGTTTGAATCAGTTGAGAGTGAGCCTTAACCGTTCACTCATCTTACCTGACATATATAATGAGCGTGAAGAAGAAGAGGTTCACATAAATGAGGATGATATAAAAGAACTACAGCTCCAGATCAATAACTTACGTGGTTCACGTGGAAATAACTCAAACTCTCTCAAGTATTCATCTGGAGAAAGTGAACACTATCTCAGCTGTTCAGAAGAAAGTGAAGGTGAAGAAATTAACTCAGATGAGATACTGGAGGAGACCCTTGATGATGCTGACCAAGAGATGGAAACGATGCAGCCTGAATACTGTAGCAGCATCTCAATAGGCCCATCCCGCCATTCTGCTGATCTTCCTGGCCCGGTGTTATCTGAGTCCCCAAAGTTTCGGAACATGCAGAGGAAGAGCTTAATTATCTCCGGTGAAGATAATATTCAAAGGTCCTTCAAAAGTTCTGAATTGGCTTTCCTGGCACAGAAACCAGACCTTGTCCAGTCTTCTTTGAGGTCCAGCAGAATATTTCCTGGGCCAACTGAATCCTTGGCTGCCAGTCTACATAGAGGACTAGAGATCATTGATTATCACCAAAGGAATTCCGCATCAAATAAATCTTTGGTTTCCTTCTCTTTTGAACATTTGGCAGTGAACCCAAGCCCAATGTCAAATGGTAAGGCCAATGCTTCTATTCAAACATCATCGGAAGAGGGACAATCTTCTCCTTTTGTAGCCGCTACATTCCTGTGTCCAAAGTGCAAGACGAAAGCAACATCCTCTAGTGTTGTTAAGGATAGCACTGGGACATGGATGGTTTCCATGGAAGGGACAAGTACGGATCAA.............................................................................................GATTCGGAGAAAGTTTTGTTCCAAGCTCTAGAGAGAGAGAAGCAGCTTGAAAGTGTATGCAAGGATCAAGCAGACAAAATTGAGCAGCTAAACCAACGA........................................................................................CTAGCCCGCTGTAAGTGCACACAAGAACAGAGTTCTTTAGTTGATTGTGGCAAGGATGTCGTTGATCTCCACGACAATGAGAATCAAGCTTCAATAATCTATCAGAATGGGAGTCAATCACCCAACATCCCAAAG.........................................................................................CTCCTGAAATGGGACGATGAAAGTCCTGAGCCTGAAGCTGCAGGAGAGAAGTATGAAACTAAAGAAATTCAGGGCAATGTCGAAAACAGTGGCGGGAAAAAAATGTTTGATATGGCTGAGAGAGAAGCACTACTTAAAGAAATTGGAGGCCTAAGGGCCCAATTGAAGTCAGATGGAGCCTCCACAAACAAATCACTTGAAAGAACCAGATCCTCTTTGTTAGCACAATCAATGCAGCTGAGAAAAAGTGGTGTATATGCTACTACGGGTTCTGGTGAAGAACTTGAGAAGGAAAGAGAAAGATGGACTGAGATGGAAAGTGAGTGGATTTGTCTAACTGATGAGCTTAGAATTGATCTTGAGGCTTATCGCCAGCGTGCAGAAAAGGTGGCAATGGAATTAATGTTGGAGAAGAAATGCACGGATGAGTTGGATGATGCCCTCAAAAGATCCGTCTTTGGGCAAGCCAGAATAATTGAGCATTACGCGGAATTACAGGAGAAGTACAACGACTTAGCTGAGAAGCATAAGTTGATCTTGCAAGGGATACAAGATGTGAAAAATGCTGCAGCAAAAGCAGGAAAGAAAGGCCATGGTGCTCGTTTCGCCAAGTCTCTCGCTGCAGAGCTGTCAGCTTTGAGAGTGGAAAGGGAAAGAGAGAGGGAAATGCTGAAAAAGGAGAATAAAAGCTTGAGAGTTCAACTTAAAGACACTGCTGAAGCTGTTCATGCAGCCGGAGAACTTCTTGTTAGATTGAGAGAAGCGGAGGAAACAGCTTCACTTGCTGAG.....................................................................................GAGAACTTTACACAATCAAAGGAAGAGAATGAGAGATTGAAGAAGCAAATAGAGAAGCTGAAGAGAAAACATAAGATGGAGATGATAACAATGAAACAGTATCTTGCTGAAAGCCGATTGCCAGAAGCAGCGTTGAGACCGCCTATTTACAGGCAAGACTCTGATGTAGCAAACAATGACAACAACAACACCATCCAACATTCTGAGTATGATGATGATCAATCATGGAGAGCAGAATTTGGCGCTATTTATCAAGAACACATATGAGCCATGTTTGATTGAACTATGGAAACACGTGAAGACCCTGCTCGGGACTTTGCTGAAAAAAACCTGCTCATCTTGATCACACCTTAGTGTTATTCAGGGATGAATTGGCTGTATTCTTATTGATTTTATCATTCTTTTGAAACTTGATTGACCAGATTTGACATTTGTTGTGAGCTGTTTCTTCAGCTTGTTAATAATAATGCTTATGTATCCTAAAAAGTCATTCAACTTTAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QPbVQW/lycopersicum_combined_unigene_seqs" ref_id="SGN-U315662" ref_strand="+" ref_description="SGN-U315662        Tomato 200607 #1 [37 ESTs aligned] arabidopsis/peptide: | Symbol: None | C2 domain-containing protein, low similarity to cold-regulated gene SRC2 (Glycine max) GI:2055230; contains Pfam profile PF00168: C2 domain | chr5:22510660-22513182 FORWARD | Aliases: None(evalue: 1e-104, score=377) genbank/nr: C2(evalue: 5e-109, score=398)">
      <seq>gactttctgacaaacttccaaatccactatcatcattcttgttgattttattctctgcaaatcacaattattctcatcctttgcttcgttttaagagttgggttttcttcattttccataaaagatcactcttttgggtagatttttggcttgataatcagagactcagtctgttggttatatttgtggtcagcttcatggattctccacagtctgttgtgtcaccatttaagagttcctccgttttcgcggactctgagaagcaaagcaatgaatttttcagcaagaacgcttctggtctatcccggggaatttctgctcatagagaggatgttgaaatctgcaacatggaggacttcattggtgttctcgacgtgtacgtacatcaggctagagatatccacaacatctgcatttaccataaacaagatgtttatgcaaaactttgccttacaagtgatcctgaaagtgcagtctccactcaaaccattaatggcggtgggaaaagtccagtcttcaacgaaaatctaaagctcaatgttcgtacgataaaatgttctgttaaatgtgagatatggatgatgagcagggtgaggaattatttggaagaccaattgttgggatttgcactagtccccttatctgaaatcctcatgaaaaatggaaagctagaaaaagagttctctctttcgtcgactgatctctttcactccccagcaggatttgtgcacttgtccctttcttacaatggaacttcacctgaagttattgaaattcctgcttttcccatattagaaactgatgcatctcggacagacggcgaagcacgtgagtcccttccaaatgagtttgacaaaattgagttcccagatcctaagattgtaaatgagaataatctcatggtctccgagtacttcaatatgccaagcagtaatccagattctcaaagctcggatagcttggtctcttctgatacggaaaaccagctcagtctagaagtcgatgtccatatggaaaatgttccaagtgaggctactaatttccaccaatatcctaagcgtgattcgcctcctagcagcatatcaaccattgactctccaacagttttgcatcccgcaagctctcagtcctccgagacccaaggagcttccaagtcgccagaggaagaatatgcatcagcttctaaagaatgtcccacaggtaaaaataatgttggaaatgctgagagcaacatatcggaaagcaagccacccagtgcatttccaaagccagtggtcattgagccagagcagaaggttgtgcaacaggatattgtggatatgtacatgaaaagtatgcagcaatttactgagtcattggcaaagatgaagcttccgctggacattgaaaatgggacaaccagttctgataattcgagttcagatcagacatcgcagacgcccaagagcactagctcaagggtgttctatggcagcagagctttcttctaagcttttgtgaatggttctcgaataacttatagcgcgattaggagcaagtctaaaaggataagtgaacactaaggattttatgaatgtggtgtttatccattttatcttgtgaatgcttaaaatgctctgaactaattaactttttgtctgttgaagacttgttttacttcagtaccttgtagttaattagaacttctgttcttaatatatgctcagcatttcccttggaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184E04-z8xSb/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0184E04.1" temp_strand="+" temp_description="C07HBa0184E04.1  AC212637.1 htgs_phase:1 submitted_to_sgn_as:gi|158262132|gb|AC212637.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0184E04, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="77420" stop="81362"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77720" g_stop="77895" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="176" r_length="176" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="77896" i_stop="79513" i_length="1618">
            <donor d_prob="0.287" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79514" g_stop="81058" g_length="1545"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="1719" r_length="1543" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1720" polyA_stop="1742"/>
      <MATCH_line gen_id="C07HBa0184E04.1" gen_strand="+" ref_id="SGN-U315662" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1721</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184E04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U315662" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77720" e_stop="77895"/>
          <exon e_start="79514" e_stop="81058"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACTTTCTGACAAACTTCCAAATCCACTATCATCATTCTTGTTGATTTTATTCTCTGCAAATCACAATTATTCTCATCCTTTGCTTCGTTTTAAGAGTTGGGTTTTCTTCATTTTCCATAAAAGATCACTCTTTTGGGTAGATTTTTGGCTTGATAATCAGAGACTCAGTCTGTTGGTAAAGAATTGGGTTCTTGGACTTTTAGTTGTTTATGTTGTTATTCTTTGACTTTGTTCTGTTTTTTGCTTGTTTAGTTTCTGAGTTGAGACTGTTTTCTGTTCTTGATTTTGAGGTGTGTTTTGTGTTTTTTTTTTTGTCTTGAAGGGGAAAAGGGGTTAAAGATTGTAGCTTTGTTCATGTAGATTTGGTGCAGGATTTAAGTTGAATAGTTAAGGGGAAAGGTAAAGATTGTGGCTTTATGCATTCTCATGGGTGCTGCACAGTTAAAACACTTGTAGGTTTATATACTTTATCTTTGGTGTCTGAGTTTAGTTTTAACACTTTGTGAGGAAGTTAAAGATTGTAGCTTTATTTGCTTTTCTGAGGTGCTGAATGGTTAGTACTTTATGGGGGTTCTGTTTGTAGGTTTATTTATTTTATCTTTGGTGTCTGAGTTAAGTTTAACCCTTTGGTAGGATTGGAAGTTAAAGATTGTTATCTTTATTTGCTTCTCAGAGGTGCTGGATTAGTTAATACTTTATGGGGTTCTGTTTATTTTTAGGATCAGAGCTGTGTGATTTGTTTCTTTAAGGAGGGAACCTGAGTTTTGAAGTGATTCTTTTTGGTGTGTTTTGGGGTTTTGTCTCTCCTTCCTTTTAGCTTTTTTTCAGTTTGGTATGAGTAAAGCTGAATTCTTTTTGAAAATAGGAGAATAGATTGAGTTAACTAGTTGACTAGCTTGGAGCAACGGTAAAGTTGTATCAGTGTGACCTATAAGTGTTTGAGTGGTGGAATAACGAGTGATGATTGTAGCAGGGTAGACTGTCTACATCACACCTCTTAGGATGCTTTGTGCACTTGGCTTCTATTTTTTTTAGGAGGTTATTCTTTTGATTCTTTAGCATAATTTCGGTATATTTCCTGATTTTGACTGTTTCTGCCTTCTATGCTATATTATTCTTCATCTTAAAATCAATTAACATGATGCTCCAATCTCAATCTTTCACTTCAGGGTTATTTTTGTTCTATTCGAGGAAAAAGATTTCATTTTTGTTTCCATTTACTTCTTTCTGTAATGAATTGTACATGTGTGGAATTGTTCTTCTTCTTGACATGATCTTGTTGTTATCTTTGATCCTTTATTTGCCATGTTATCATTTATGAGCTCTGAATAATTGTCACTTGGTCCTAATATGTATCTGAGTTAGGTTAACGAGTTTATTCGTTAAGGTTTCACTTTAAATAAAGCTTCTAGTTCTTGTTTGATGGAGCATGTTACACAATAGGTAAATTCCACATTGAAATGAGAGATACGTACACATTTTGGCTCGATGATTGCATAGCCCAAGGGACAAATCCATAAGGTCTGTAGGGTCAAAGTGGACAATACGTATCATGGGTTTGGGCTGTGACATATAGTGTGGAGAGACCATTCGTTGGGAACTCCAGTATAGTTGTTGTGTGCTCCAAAACAAGTTTGTGTTAAACAAATATATTTCTACTCCTTCAATTACTAGCCGTTCCTCTGTTATAAGCTATTTAATTTGTGGAGATCATTCAGTTTTTGTTCATAGCTATGTGTTCAGTATTAGCCGATGTGATATCTGATATTGATCTTATCCTTCGATTTTCTTAGGTTATATTTGTGGTCAGCTTCATGGATTCTCCACAGTCTGTTGTGTCACCATTTAAGAGTTCCTCCGTTTTCGCGGACTCTGAGAAGCAAAGCAATGAATTTTTCAGCAAGAACGCTTCTGGTCTATCCCGGGGAATTTCTGCTCATAGAGAGGATGTTGAAATCTGCAACATGGAGGACTTCATTGGTGTTCTCGACGTGTACGTACATCAGGCTAGAGATATCCACAACATCTGCATTTACCATAAACAAGATGTTTATGCAAAACTTTGCCTTACAAGTGATCCTGAAAGTGCAGTCTCCACTCAAACCATTAATGGCGGTGGGAAAAGTCCAGTCTTCAACGAAAATCTAAAGCTCAATGTTCGTACGATAAAATGTTCTGTTAAATGTGAGATATGGATGATGAGCAGGGTGAGGAATTATTTGGAAGACCAATTGTTGGGATTTGCACTAGTCCCCTTATCTGAAATCCTCATGAAAAATGGAAAGGTAGAAAAAGAGTTCTCTCCTTTTCGTCGACTGATCTCTTTCACTCCCCAGCAGGATTTGTGCACTTGTCCCTTTCTTACAATGGAACTTCACCTGAAGTTATTGAAATTCCTGCTTTTCCCATATTAGAAACTGATGCATCTCGGACAGACGGCGAAGCACGTGAGTCCCTTCCAAATGAGTTTGACAAAATTGAGTTCCCAGATCCTAAGATTGTAAATGAGAATAATCTCATGGTCTCCGAGTACTTCAATATGCCAAGCAGTAATCCAGATTCTCAAAGCTCGGATAGCTTGGTCTCTTCTGATACGGAAAACCAGCTCAGTCTAGAAGTCGATGTCCATATGGAAAATGTTCCAAGTGAGGCTACTAATTTCCACCAATATCCTAAGCGTGATTCGCCTCCTAGCAGCATATCAACCATTGACTCTCCAACAGTTTTGCATCCCGCAAGCTCTCAGTCCTCCGAGACCCAAGGAGCTTCCAAGTCGCCAGAGGAAGAATATGCATCAGCTTCTAAAGAATGTCCCACAGGTAAAAATAATGTTGGAAATGCTGAGAGCAACATATCGGAAAGCAAGCCACCCAGTGCATTTCCAAAGCCAGTGGTCATTGAGCCAGAGCAGAAGGTTGTGCAACAGGATATTGTGGATATGTACATGAAAAGTATGCAGCAATTTACTGAGTCATTGGCAAAGATGAAGCTTCCGCTGGACATTGAAAATGGGACAACCAGTTCTGATAATTCGAGTTCAGATCAGACATCGCAGACGCCCAAGAGCACTAGCTCAAGGGTGTTCTATGGCAGCAGAGCTTTCTTCTAAGCTTTTGTGAATGGTTCTCGAATAACTTATAGCGCGATTAGGAGCAAGTCTAAAAGGATAAGTGAACACTAAGGATTTTATGAATGTGGTGTTTATCCATTTTATCTTGTGAATGCTTAAAATGCTCTGAACTAATTAACTTTTTGTCTGTTGAAGACTTGTTTTACTTCAGTACCTTGTAGTTAATTAGAACTTCTGTTCTTAATATATGCTCAGCATTTCCCTTGGA</genome_strand>
        <mrna_strand>GACTTTCTGACAAACTTCCAAATCCACTATCATCATTCTTGTTGATTTTATTCTCTGCAAATCACAATTATTCTCATCCTTTGCTTCGTTTTAAGAGTTGGGTTTTCTTCATTTTCCATAAAAGATCACTCTTTTGGGTAGATTTTTGGCTTGATAATCAGAGACTCAGTCTGTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATATTTGTGGTCAGCTTCATGGATTCTCCACAGTCTGTTGTGTCACCATTTAAGAGTTCCTCCGTTTTCGCGGACTCTGAGAAGCAAAGCAATGAATTTTTCAGCAAGAACGCTTCTGGTCTATCCCGGGGAATTTCTGCTCATAGAGAGGATGTTGAAATCTGCAACATGGAGGACTTCATTGGTGTTCTCGACGTGTACGTACATCAGGCTAGAGATATCCACAACATCTGCATTTACCATAAACAAGATGTTTATGCAAAACTTTGCCTTACAAGTGATCCTGAAAGTGCAGTCTCCACTCAAACCATTAATGGCGGTGGGAAAAGTCCAGTCTTCAACGAAAATCTAAAGCTCAATGTTCGTACGATAAAATGTTCTGTTAAATGTGAGATATGGATGATGAGCAGGGTGAGGAATTATTTGGAAGACCAATTGTTGGGATTTGCACTAGTCCCCTTATCTGAAATCCTCATGAAAAATGGAAAGCTAGAAAAAGAGTTCTCT-C-TTTCGTCGACTGATCTCTTTCACTCCCCAGCAGGATTTGTGCACTTGTCCCTTTCTTACAATGGAACTTCACCTGAAGTTATTGAAATTCCTGCTTTTCCCATATTAGAAACTGATGCATCTCGGACAGACGGCGAAGCACGTGAGTCCCTTCCAAATGAGTTTGACAAAATTGAGTTCCCAGATCCTAAGATTGTAAATGAGAATAATCTCATGGTCTCCGAGTACTTCAATATGCCAAGCAGTAATCCAGATTCTCAAAGCTCGGATAGCTTGGTCTCTTCTGATACGGAAAACCAGCTCAGTCTAGAAGTCGATGTCCATATGGAAAATGTTCCAAGTGAGGCTACTAATTTCCACCAATATCCTAAGCGTGATTCGCCTCCTAGCAGCATATCAACCATTGACTCTCCAACAGTTTTGCATCCCGCAAGCTCTCAGTCCTCCGAGACCCAAGGAGCTTCCAAGTCGCCAGAGGAAGAATATGCATCAGCTTCTAAAGAATGTCCCACAGGTAAAAATAATGTTGGAAATGCTGAGAGCAACATATCGGAAAGCAAGCCACCCAGTGCATTTCCAAAGCCAGTGGTCATTGAGCCAGAGCAGAAGGTTGTGCAACAGGATATTGTGGATATGTACATGAAAAGTATGCAGCAATTTACTGAGTCATTGGCAAAGATGAAGCTTCCGCTGGACATTGAAAATGGGACAACCAGTTCTGATAATTCGAGTTCAGATCAGACATCGCAGACGCCCAAGAGCACTAGCTCAAGGGTGTTCTATGGCAGCAGAGCTTTCTTCTAAGCTTTTGTGAATGGTTCTCGAATAACTTATAGCGCGATTAGGAGCAAGTCTAAAAGGATAAGTGAACACTAAGGATTTTATGAATGTGGTGTTTATCCATTTTATCTTGTGAATGCTTAAAATGCTCTGAACTAATTAACTTTTTGTCTGTTGAAGACTTGTTTTACTTCAGTACCTTGTAGTTAATTAGAACTTCTGTTCTTAATATATGCTCAGCATTTCCCTTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QPbVQW/lycopersicum_combined_unigene_seqs" ref_id="SGN-U344042" ref_strand="+" ref_description="SGN-U344042        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT5G55560.1 | Symbol: None | protein kinase family protein, contains protein kinase domain, Pfam:PF00069 | chr5:22523603-22525075 REVERSE | Aliases: MWC10.1, MWC10_1 (evalue: 8e-48, score=187) genbank/nr: Protein(evalue: 8e-52, score=207)">
      <seq>tgtgatataggttaagattggtgatttgggttttgcaactatagtagggaagagtcattcagcacattcggttcttggaaccccagagttcatggcaccggagttgtatgatgaggattataccgagctgattgatatctactcgtttgggatgtgtgttttggagatggtgacgttggaactaccttatagtgagtgtgataacgtggtgaagatatacaagaaggtaatatccggagtgaggcccaaggccatggacaaggttaaagatctcgaggtcaagaagttcattgagaagtgtcttgctcagcctagggttagaccctctgcttctgaactccttcaagaccctttctttaatgatattaatgatgatgacgaaaacgacgatgaagagtatactagtaacaactattggcatgcttaagtcagccatagctattatttgctagttgctattatattagttagttgtattaggttttgttgtgatatttttggtgttgatttgttacttatagtggtttttgccttttcttccaaaaagaagaaagaaaatggttttgctttttatgaaactattgtaaaagaaaaaacaatagaaaaaagagtgtatttttattaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184E04-z8xSb/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0184E04.1" temp_strand="-" temp_description="C07HBa0184E04.1  AC212637.1 htgs_phase:1 submitted_to_sgn_as:gi|158262132|gb|AC212637.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0184E04, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="86972" stop="76149"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86672" g_stop="86034" g_length="639"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="638" r_length="638" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184E04.1" gen_strand="-" ref_id="SGN-U344042" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>639</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184E04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U344042" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86672" e_stop="86034"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGATATAGGTTAAGATTGGTGATTTGGGTTTTGCAACTATAGTAGGGAAGAGTCATTCAGCACATTCGGTTCTTGGAACCCCAGAGTTCATGGCACCGGAGTTGTATGATGAGGATTATACCGAGCTGATTGATATCTACTCGTTTGGGATGTGTGTTTTGGAGATGGTGACGTTGGAACTACCTTATAGTGAGTGTGATAACGTGGTGAAGATATACAAGAAGGTAATATCCGGAGTGAGGCCCAAGGCCATGGACAAGGTTAAAGATCTCGAGGTCAAGAAGTTCATTGAGAAGTGTCTTGCTCAGCCTAGGGTTAGACCCTCTGCTTCTGAACTCCTTCAAGACCCTTTCTTTAATGATATTAATGATGATGACGAAAACGACGATGAAGAGTATACTAGTAACAACTATTGGCATGCTTAAGTCAGCCATAGCTATTATTTGCTAGTTGCTATTATATTAGTTAGTTGTATTAGGTTTTGTTGTGATATTTTTGGTGTTGATTTGTTACTTATAGTGGTTTTTGCCTTTTCTTCCAAAAAGAAGAAAAGAAAATGGTTTTGCTTTTTATGAAACTATTGTAAAAGAAAAAACAATAGAAAAAAGAGTGTATTTTTATTAAGAAATTTGTACAT</genome_strand>
        <mrna_strand>TGTGATATAGGTTAAGATTGGTGATTTGGGTTTTGCAACTATAGTAGGGAAGAGTCATTCAGCACATTCGGTTCTTGGAACCCCAGAGTTCATGGCACCGGAGTTGTATGATGAGGATTATACCGAGCTGATTGATATCTACTCGTTTGGGATGTGTGTTTTGGAGATGGTGACGTTGGAACTACCTTATAGTGAGTGTGATAACGTGGTGAAGATATACAAGAAGGTAATATCCGGAGTGAGGCCCAAGGCCATGGACAAGGTTAAAGATCTCGAGGTCAAGAAGTTCATTGAGAAGTGTCTTGCTCAGCCTAGGGTTAGACCCTCTGCTTCTGAACTCCTTCAAGACCCTTTCTTTAATGATATTAATGATGATGACGAAAACGACGATGAAGAGTATACTAGTAACAACTATTGGCATGCTTAAGTCAGCCATAGCTATTATTTGCTAGTTGCTATTATATTAGTTAGTTGTATTAGGTTTTGTTGTGATATTTTTGGTGTTGATTTGTTACTTATAGTGGTTTTTGCCTTTTCTTCCAAAAAGAAG-AAAGAAAATGGTTTTGCTTTTTATGAAACTATTGTAAAAGAAAAAACAATAGAAAAAAGAGTGTATTTTTATTAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QPbVQW/lycopersicum_combined_unigene_seqs" ref_id="SGN-U346096" ref_strand="+" ref_description="SGN-U346096        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT4G26640.2 | Symbol: None | WRKY family transcription factor, contains Pfam profile: PF03106 WRKY DNA -binding domain | chr4:13437077-13440804 REVERSE | Aliases: None (evalue: 7e-25, score=111) genbank/nr: gi|45935013|gb|AAS79541.1| At4g26640 [Arabidopsis thaliana] >gi|46367452|emb|CAG25852.1| hypothetical protein [Arabidopsis thaliana] >gi|15991746|gb|AAL13050.1| WRKY transcription factor 20 [Arabidopsis thaliana] >gi|30687299|ref|NP_849450.1| WRKY family transcription factor [Arabidopsis thaliana] >gi|20978777|sp|Q93WV0|WRK20_ARATH Probable WRKY transcription factor 20 (WRKY DNA-binding protein 20) (evalue: 5e-23, score=111)">
      <seq>caactcagagatggaacaaactcctccggaggcttccgtcacaacgccgctggatcgaacggcggtgctaagtacaagctcatgactcctgctatgcttccgatctctaggtccgcctgtatcaccatacctcccggtctcagtccttcctccttcctcgaatctcctgttctcctttctaacatcaaagctgagccatctccgactacaggttccttctccaaatttcaaacagtgcaaggctctggtggggctgctgcattcttattgacaagaggttatgctagtggcaatacatacactgaaagaaaagcaagctgctttgaatacaaatatgccggtggatctagttctacatcaggatcattagcaactgaacatgtggtaatgctctattagaaaatattattgatgttggattagaaacaaaaagcaaatgaaacaagagcttttttattagcagtagccctctttaacaactgactgatgtttaatttagaaaaaatgaaagtttaactctgaggttcaggttcctgttcttgtgtctttctcttgatatggcatctatttgaggttaatgtcaaatgtgtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184E04-z8xSb/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0184E04.1" temp_strand="+" temp_description="C07HBa0184E04.1  AC212637.1 htgs_phase:1 submitted_to_sgn_as:gi|158262132|gb|AC212637.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0184E04, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="91597" stop="93989"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91897" g_stop="92085" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="189" r_length="189" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92086" i_stop="93286" i_length="1201">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93287" g_stop="93689" g_length="403"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="592" r_length="403" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184E04.1" gen_strand="+" ref_id="SGN-U346096" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>592</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184E04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U346096" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91897" e_stop="92085"/>
          <exon e_start="93287" e_stop="93689"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACTCAGAGATGGAACAAACTCCTCCGGAGGCTTCCGTCACAACGCCGCTGGATCGAACGGCGGTGCTAAGTACAAGCTCATGACTCCTGCTATGCTTCCGATCTCTAGGTCCGCCTGTATCACCATACCTCCCGGTCTCAGTCCTTCCTCCTTCCTCGAATCTCCTGTTCTCCTTTCTAACATCAAAGTCAGTTCTCAATCTCTATTTCTCTGTTATTTTTAACCATTAATACTGGACGAAATTTAAGCTTGTTTTGTTAGAATTGTAACACATTAGCTGAAGAAATGAAGTTATTTTGACTACGATGCTTTTTCTAATCGGAGAATTTTAGTAGATCCAGGATGTTGAGGTGATTATCAGCAATAATTAGCTGTTGTTATGTTCTGATTGATAAGAAAACGAAGGATAAGCTATAATGAAAAATAATTAGGGAATCTTAACAATTAATTAGTTTAAGTGTTGTTAAGAGTAAGGTGTATAGTTGTGCTGTCTTCAATTGAGTGAAATGCAAACTATTAGTAAAACTTTTTTCCTTTTTGATTGCGTCATAATATACTAATCAGTGGAGGATTTGAGGATTTTTTTGATGTGATTGTTGCTTTCTTAAAGTACGGTTTGAATTATTGATTAGATATTTGGTTCTTTTCATTGGCATTTGCAATTTGCAACTTGTTAGTTTGATTCTTCTGCATATAACTAAGTGCTCATTTAAGAATATAATATTTATCTGTAAATATAAGTTTGTTTATCTGTGCAAATTGTCACCGTTGGTTCTGATGCTTACATGAACAATGTACTGTATTGGTGCATATATCGTTTTTTAATAGAATTATGCTTGTGGCCTTTACCAGAATACATATTCTTCGTTCTTCTGCGTGGAAAAAGCTTAGTTAGGGATCAGTGTTGTTTTTTCACATAATGAATCTTCCTTTTTCACAAGGTGCTCAGCTTTTCCACTATGTTGTTCCTTGTGGAAAAAGATGTTTATTTTTTAGTGCTCAGTCCGTATAATGGCATCAGTAAATTCCCCTACATTGTTCTTCTGACCTACTTATATGCTTTTTAAAGCTTGCCTAAATTTTTGTCTTATTCGAACGTAAATGCTAATGTTCTGTTGCAGATAAATGATATTTTGCACTACTATAAGTAGCATCTATCTTCCTCCACCCAAATGAAAAGAAATGAACCTGAAGGTGACGTAAAAAAGAAAAAACTTTTCTCCCTCCTCAACGGAGCAGAAAACTGAGAAAGAGTAGTAAATATATGTACCATGTCTGTCAATGGATGAATGTGTTCCCCTTTGGAAAAGAAAATTGTGATCAATAACTTGAAAGTTTATTTCATTTACCTATCAAAACACTTAGTCTATTTCACTTATAACCTGCAGGCTGAGCCATCTCCGACTACAGGTTCCTTCTCCAAATTTCAAACAGTGCAAGGCTCTGGTGGGGCTGCTGCATTCTTATTGACAAGAGGTTATGCTAGTGGCAATACATACACTGAAAGAAAAGCAAGCTGCTTTGAATACAAATATGCCGGTGGATCTAGTTCTACATCAGGATCATTAGCAACTGAACATGTGGTAATGCTCTATTAGAAAATATTATTGATGTTGGATTAGAAACAAAAAGCAAATGAAACAAGAGCTTTTTTATTAGCAGTAGCCCTCTTTAACAACTGACTGATGTTTAATTTAGAAAAAATGAAAGTTTAACTCTGAGGTTCAGGTTCCTGTTCTTGTGTCTTTCTCTTGATATGGCATCTATTTGAGGTTAATGTCAAATGTGTGC</genome_strand>
        <mrna_strand>CAACTCAGAGATGGAACAAACTCCTCCGGAGGCTTCCGTCACAACGCCGCTGGATCGAACGGCGGTGCTAAGTACAAGCTCATGACTCCTGCTATGCTTCCGATCTCTAGGTCCGCCTGTATCACCATACCTCCCGGTCTCAGTCCTTCCTCCTTCCTCGAATCTCCTGTTCTCCTTTCTAACATCAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGAGCCATCTCCGACTACAGGTTCCTTCTCCAAATTTCAAACAGTGCAAGGCTCTGGTGGGGCTGCTGCATTCTTATTGACAAGAGGTTATGCTAGTGGCAATACATACACTGAAAGAAAAGCAAGCTGCTTTGAATACAAATATGCCGGTGGATCTAGTTCTACATCAGGATCATTAGCAACTGAACATGTGGTAATGCTCTATTAGAAAATATTATTGATGTTGGATTAGAAACAAAAAGCAAATGAAACAAGAGCTTTTTTATTAGCAGTAGCCCTCTTTAACAACTGACTGATGTTTAATTTAGAAAAAATGAAAGTTTAACTCTGAGGTTCAGGTTCCTGTTCTTGTGTCTTTCTCTTGATATGGCATCTATTTGAGGTTAATGTCAAATGTGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QPbVQW/lycopersicum_combined_unigene_seqs" ref_id="SGN-U321709" ref_strand="+" ref_description="SGN-U321709        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: AT4G26640.1 | Symbol: None | WRKY family transcription factor, contains Pfam profile: PF03106 WRKY DNA -binding domain | chr4:13437077-13439813 REVERSE | Aliases: T15N24.90, T15N24_90 (evalue: 1e-58, score=222) genbank/nr: gi|1432058|gb|AAC49529.1| WRKY2 (evalue: 3e-69, score=263)">
      <seq>taaaactgagcctagtagtactcccgtatcacctcagcaagcggacactgatggtcttgaaggagcagggtcacagatgcatggcactaatgatgatatggatgaggatgatcaatttgcgaaaagaaggaaaatggatggtgggatggatataacaccagtgattaagcctatccgtgaaccacgcgttgttgttcaaacagtcagtgaagttgatatattggatgatgggtacaagtggcgcaaatatggacagaaggtggtccgaggcaatcctaatcctaggagctattacaagtgcaccaatgctggatgccctgtcaggaaacatgtggagagggcttctcatgatccaaaagctgttatcaccacatatgaaggaaaacataaccacgatgtacccgctgcaaaaaataataaccatgaaatgacaggatcctcgcctgtaaccggcagttcaaggatcagggcaggagagaccaactcacttagtctggatctaggcgttagtactggatatcgtcttgataatgggaacaacgggcaacttcacaccctccatcaccaagttcaagtttcacgttctggtatgatgctagtac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184E04-z8xSb/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0184E04.1" temp_strand="+" temp_description="C07HBa0184E04.1  AC212637.1 htgs_phase:1 submitted_to_sgn_as:gi|158262132|gb|AC212637.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0184E04, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="94986" stop="96754"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95286" g_stop="95414" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="129" r_length="129" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95415" i_stop="95483" i_length="69">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="95484" g_stop="95639" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="285" r_length="156" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="95640" i_stop="96137" i_length="498">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="96138" g_stop="96454" g_length="317"/>
          <reference_exon_boundary r_type="cDNA" r_start="286" r_stop="602" r_length="317" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184E04.1" gen_strand="+" ref_id="SGN-U321709" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>602</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184E04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U321709" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95286" e_stop="95414"/>
          <exon e_start="95484" e_stop="95639"/>
          <exon e_start="96138" e_stop="96454"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAACTGAGCCTAGTAGTACTCCCGTATCACCTCAGCAAGCGGACACTGATGGTCTTGAAGGAGCAGGGTCACAGATGCATGGCACTAATGATGATATGGATGAGGATGATCAATTTGCGAAAAGAAGGTAAAACTGTTGGAACTCCTTCAGTTCATTCCTGCAATAGATCTAATAGATGGTTAAAATTTTACGCAGGAAAATGGATGGTGGGATGGATATAACACCAGTGATTAAGCCTATCCGTGAACCACGCGTTGTTGTTCAAACAGTCAGTGAAGTTGATATATTGGATGATGGGTACAAGTGGCGCAAATATGGACAGAAGGTGGTCCGAGGCAATCCTAATCCTAGGTATGTAATGTTTATGGTTTGTAGTTATCTGGACATGTGACCTCATGTCACATTATTGGCGTCTACACAGACCTGATTTATCTTGCTATGTAACAAGTATCTGACAAAAGTCATTACTGGTTGTTGGTTGTGTTGGCTATTTATGAAATAGTCATTTAAAATGTTCTGAGTTGTAGCCTAAGAAAGTCTGACACTTGTCATATATGAGCCTTCTCTTGATGAGAGGTAAGAGCCTAAAAGAGACAATGAAGTCTCTAGGATAGCAGATCCTTAATCCATCAATCCCAAGATCTTCTTCGTTGTAAGCCAACAGTCTATAGTTTGGAATTTAAGATGAATTAGAGACCATTTATCATTAAGTTCATCAAACATTCACACTCTTCATGATTCTAATAGATCTCTGGTAAGCTTTTGTATCATGCCAGAAGCTAGGGATTTCGAGCATTTTCTTATCCGAGTGGTCAATCTTTTCTCCTGATTTCATGTCATGTCATGCAGGAGCTATTACAAGTGCACCAATGCTGGATGCCCTGTCAGGAAACATGTGGAGAGGGCTTCTCATGATCCAAAAGCTGTTATCACCACATATGAAGGAAAACATAACCACGATGTACCCGCTGCAAAAAATAATAACCATGAAATGACAGGATCCTCGCCTGTAACCGGCAGTTCAAGGATCAGGGCAGGAGAGACCAACTCACTTAGTCTGGATCTAGGCGTTAGTACTGGATATCGTCTTGATAATGGGAACAACGGGCAACTTCACACCCTCCATCACCAAGTTCAAGTTTCACGTTCTGGTATGATGCTAGTAC</genome_strand>
        <mrna_strand>TAAAACTGAGCCTAGTAGTACTCCCGTATCACCTCAGCAAGCGGACACTGATGGTCTTGAAGGAGCAGGGTCACAGATGCATGGCACTAATGATGATATGGATGAGGATGATCAATTTGCGAAAAGAAG.....................................................................GAAAATGGATGGTGGGATGGATATAACACCAGTGATTAAGCCTATCCGTGAACCACGCGTTGTTGTTCAAACAGTCAGTGAAGTTGATATATTGGATGATGGGTACAAGTGGCGCAAATATGGACAGAAGGTGGTCCGAGGCAATCCTAATCCTAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTATTACAAGTGCACCAATGCTGGATGCCCTGTCAGGAAACATGTGGAGAGGGCTTCTCATGATCCAAAAGCTGTTATCACCACATATGAAGGAAAACATAACCACGATGTACCCGCTGCAAAAAATAATAACCATGAAATGACAGGATCCTCGCCTGTAACCGGCAGTTCAAGGATCAGGGCAGGAGAGACCAACTCACTTAGTCTGGATCTAGGCGTTAGTACTGGATATCGTCTTGATAATGGGAACAACGGGCAACTTCACACCCTCCATCACCAAGTTCAAGTTTCACGTTCTGGTATGATGCTAGTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QPbVQW/lycopersicum_combined_unigene_seqs" ref_id="SGN-U337438" ref_strand="+" ref_description="SGN-U337438        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT4G26640.1 | Symbol: None | WRKY family transcription factor, contains Pfam profile: PF03106 WRKY DNA -binding domain | chr4:13437077-13439813 REVERSE | Aliases: T15N24.90, T15N24_90 (evalue: 5e-60, score=228) genbank/nr: gi|1432058|gb|AAC49529.1| WRKY2 (evalue: 9e-74, score=280)">
      <seq>ctgatggtcttgaaggagcagggtcacagatgcatggcactaatgatgatatggatgaggatgatcaatttgcgaaaagaaggaaaatggatggtgggatggatataacaccagtgattaagcctatccgtgaaccacgcgttgttgttcaaacagtcagtgaagttgatatattggatgatgggtacaagtggcgcaaatatggacagaaggtggtccgaggcaatcctaatcctaggagctattacaagtgcaccaatgctggatgccctgtcaggaaacatgtggagagggcttctcatgatccaaaagctgttatcaccacatatgaaggaaaacataaccacgatgtacccgctgcaaaaaataataaccatgaaatgacaggatcctcgcctgtaaccggcagttcaaggatcagggcaggagagaccaactcacttagtctggatctaggcgttagtactggatatcgtcttgataatgggaacaacgggcaacttcacaccctccatcaccaagttcaagtttcacgttctggtatgatgctagtacagccagctgcagttgcagcgcgctatggtattgtacatggtggtatgagccgatttggagctatagataatcgtgttcaaggacctagttttgaaactttgcctttacaaccttctactcagtctctccaaaactatggaaagatacttcttggcccgtgaatcgtatctaccatcaactataagagcttaacaataagaagccaccatctatattttttcctgcatcttggtggattacaaagatatctctagttgaagtataaatacttctaggactcgtcgcgtgatgctgtataatacaccttcacctagtgttctttgtgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184E04-z8xSb/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0184E04.1" temp_strand="+" temp_description="C07HBa0184E04.1  AC212637.1 htgs_phase:1 submitted_to_sgn_as:gi|158262132|gb|AC212637.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0184E04, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="95033" stop="97081"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95333" g_stop="95414" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="82" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95415" i_stop="95483" i_length="69">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="95484" g_stop="95639" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="83" r_stop="238" r_length="156" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="95640" i_stop="96137" i_length="498">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="96138" g_stop="96781" g_length="644"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="882" r_length="644" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184E04.1" gen_strand="+" ref_id="SGN-U337438" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>882</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184E04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U337438" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95333" e_stop="95414"/>
          <exon e_start="95484" e_stop="95639"/>
          <exon e_start="96138" e_stop="96781"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGATGGTCTTGAAGGAGCAGGGTCACAGATGCATGGCACTAATGATGATATGGATGAGGATGATCAATTTGCGAAAAGAAGGTAAAACTGTTGGAACTCCTTCAGTTCATTCCTGCAATAGATCTAATAGATGGTTAAAATTTTACGCAGGAAAATGGATGGTGGGATGGATATAACACCAGTGATTAAGCCTATCCGTGAACCACGCGTTGTTGTTCAAACAGTCAGTGAAGTTGATATATTGGATGATGGGTACAAGTGGCGCAAATATGGACAGAAGGTGGTCCGAGGCAATCCTAATCCTAGGTATGTAATGTTTATGGTTTGTAGTTATCTGGACATGTGACCTCATGTCACATTATTGGCGTCTACACAGACCTGATTTATCTTGCTATGTAACAAGTATCTGACAAAAGTCATTACTGGTTGTTGGTTGTGTTGGCTATTTATGAAATAGTCATTTAAAATGTTCTGAGTTGTAGCCTAAGAAAGTCTGACACTTGTCATATATGAGCCTTCTCTTGATGAGAGGTAAGAGCCTAAAAGAGACAATGAAGTCTCTAGGATAGCAGATCCTTAATCCATCAATCCCAAGATCTTCTTCGTTGTAAGCCAACAGTCTATAGTTTGGAATTTAAGATGAATTAGAGACCATTTATCATTAAGTTCATCAAACATTCACACTCTTCATGATTCTAATAGATCTCTGGTAAGCTTTTGTATCATGCCAGAAGCTAGGGATTTCGAGCATTTTCTTATCCGAGTGGTCAATCTTTTCTCCTGATTTCATGTCATGTCATGCAGGAGCTATTACAAGTGCACCAATGCTGGATGCCCTGTCAGGAAACATGTGGAGAGGGCTTCTCATGATCCAAAAGCTGTTATCACCACATATGAAGGAAAACATAACCACGATGTACCCGCTGCAAAAAATAATAACCATGAAATGACAGGATCCTCGCCTGTAACCGGCAGTTCAAGGATCAGGGCAGGAGAGACCAACTCACTTAGTCTGGATCTAGGCGTTAGTACTGGATATCGTCTTGATAATGGGAACAACGGGCAACTTCACACCCTCCATCACCAAGTTCAAGTTTCACGTTCTGGTATGATGCTAGTACAGCCAGCTGCAGTTGCAGCGCGCTATGGTATTGTACATGGTGGTATGAGCCGATTTGGAGCTATAGATAATCGTGTTCAAGGACCTAGTTTTGAAACTTTGCCTTTACAACCTTCTACTCAGTCTCTCCAAAACTATGGAAAGATACTTCTTGGCCCGTGAATCGTATCTACCATCAACTATAAGAGCTTAACAATAAGAAGCCACCATCTATATTTTTTCCTGCATCTTGGTGGATTACAAAGATATCTCTAGTTGAAGTATAAATACTTCTAGGACTCGTCGCGTGATGCTGTATAATACACCTTCACCTAGTGTTCTTTGTGTA</genome_strand>
        <mrna_strand>CTGATGGTCTTGAAGGAGCAGGGTCACAGATGCATGGCACTAATGATGATATGGATGAGGATGATCAATTTGCGAAAAGAAG.....................................................................GAAAATGGATGGTGGGATGGATATAACACCAGTGATTAAGCCTATCCGTGAACCACGCGTTGTTGTTCAAACAGTCAGTGAAGTTGATATATTGGATGATGGGTACAAGTGGCGCAAATATGGACAGAAGGTGGTCCGAGGCAATCCTAATCCTAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTATTACAAGTGCACCAATGCTGGATGCCCTGTCAGGAAACATGTGGAGAGGGCTTCTCATGATCCAAAAGCTGTTATCACCACATATGAAGGAAAACATAACCACGATGTACCCGCTGCAAAAAATAATAACCATGAAATGACAGGATCCTCGCCTGTAACCGGCAGTTCAAGGATCAGGGCAGGAGAGACCAACTCACTTAGTCTGGATCTAGGCGTTAGTACTGGATATCGTCTTGATAATGGGAACAACGGGCAACTTCACACCCTCCATCACCAAGTTCAAGTTTCACGTTCTGGTATGATGCTAGTACAGCCAGCTGCAGTTGCAGCGCGCTATGGTATTGTACATGGTGGTATGAGCCGATTTGGAGCTATAGATAATCGTGTTCAAGGACCTAGTTTTGAAACTTTGCCTTTACAACCTTCTACTCAGTCTCTCCAAAACTATGGAAAGATACTTCTTGGCCCGTGAATCGTATCTACCATCAACTATAAGAGCTTAACAATAAGAAGCCACCATCTATATTTTTTCCTGCATCTTGGTGGATTACAAAGATATCTCTAGTTGAAGTATAAATACTTCTAGGACTCGTCGCGTGATGCTGTATAATACACCTTCACCTAGTGTTCTTTGTGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QPbVQW/lycopersicum_combined_unigene_seqs" ref_id="SGN-U329500" ref_strand="+" ref_description="SGN-U329500        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: AT5G48150.1 | Symbol: None | phytochrome A signal transduction 1 (PAT1) | chr5:19539485-19541839 REVERSE | Aliases: MIF21.4, MIF21_4 (evalue: 9e-72, score=266) genbank/nr: PAT1(evalue: 6e-70, score=266)">
      <seq>gcgttggaactcaaaatcacagagacagacttctgaggatggttaaaagcttatctcccaagattgttaccttagtggagcaagagtccaacactaacacagcccaattcttccccaggttcttggagacactgaactactacctatctgttttcgaatcaatagacgtggctctacctagagaccataaggaacgaatcaacgttgagcaacactgcttagcccgtgaaattgtcaacatattagcatgtgaaggggcagagagagtggaacgacacgagctgcttgaaaggtggagatcacgatttgctgtggccgggtttaaaccatatccgttaagctcctcagtaaatgctactatcaagaccctgctggagaattactaccaaagttatacgcttaatgagagaaatggcgcgctctatcttggctggatgaatcgagatttagttgcttcttgtgcatggaaataatctcttatcggaaacagtctctctatcctgcaaaggtagaggtaaagtctgtgtagatcctacctaccgtaattaggtgcatgtaacttgtagcttgataatggtgagacagatagtggcacctcttcttttttctgtttgtattaatttaaaaagacaggtcatttaatcttgctaggatctgttctatcagaaactaatcgaagtcttttttatctctcaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184E04-z8xSb/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0184E04.1" temp_strand="-" temp_description="C07HBa0184E04.1  AC212637.1 htgs_phase:1 submitted_to_sgn_as:gi|158262132|gb|AC212637.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0184E04, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="98026" stop="76148"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97726" g_stop="97014" g_length="713"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="713" r_length="713" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184E04.1" gen_strand="-" ref_id="SGN-U329500" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184E04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U329500" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97726" e_stop="97014"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGTTGGAACTCAAAATCACAGAGACAGACTTCTGAGGATGGTTAAAAGCTTATCTCCCAAGATTGTTACCTTAGTGGAGCAAGAGTCCAACACTAACACAGCCCAATTCTTCCCCAGGTTCTTGGAGACACTGAACTACTACCTATCTGTTTTCGAATCAATAGACGTGGCTCTACCTAGAGACCATAAGGAACGAATCAACGTTGAGCAACACTGCTTAGCCCGTGAAATTGTCAACATATTAGCATGTGAAGGGGCAGAGAGAGTGGAACGACACGAGCTGCTTGAAAGGTGGAGATCACGATTTGCTGTGGCCGGGTTTAAACCATATCCGTTAAGCTCCTCAGTAAATGCTACTATCAAGACCCTGCTGGAGAATTACTACCAAAGTTATACGCTTAATGAGAGAAATGGCGCGCTCTATCTTGGCTGGATGAATCGAGATTTAGTTGCTTCTTGTGCATGGAAATAATCTCTTATCGGAAACAGTCTCTCTATCCTGCAAAGGTAGAGGTAAAGTCTGTGTAGATCCTACCTACCGTAATTAGGTGCATGTAACTTGTAGCTTGATAATGGTGAGACAGATAGTGGCACCTCTTCTTTTTTCTGTTTGTATTAATTTAAAAAGACAGGTCATTTAATCTTGCTAGGATCTGTTCTATCAGAAACTAATCGAAGTCTTTTTTATCTCTCACATTGTTCATGTTCATAG</genome_strand>
        <mrna_strand>GCGTTGGAACTCAAAATCACAGAGACAGACTTCTGAGGATGGTTAAAAGCTTATCTCCCAAGATTGTTACCTTAGTGGAGCAAGAGTCCAACACTAACACAGCCCAATTCTTCCCCAGGTTCTTGGAGACACTGAACTACTACCTATCTGTTTTCGAATCAATAGACGTGGCTCTACCTAGAGACCATAAGGAACGAATCAACGTTGAGCAACACTGCTTAGCCCGTGAAATTGTCAACATATTAGCATGTGAAGGGGCAGAGAGAGTGGAACGACACGAGCTGCTTGAAAGGTGGAGATCACGATTTGCTGTGGCCGGGTTTAAACCATATCCGTTAAGCTCCTCAGTAAATGCTACTATCAAGACCCTGCTGGAGAATTACTACCAAAGTTATACGCTTAATGAGAGAAATGGCGCGCTCTATCTTGGCTGGATGAATCGAGATTTAGTTGCTTCTTGTGCATGGAAATAATCTCTTATCGGAAACAGTCTCTCTATCCTGCAAAGGTAGAGGTAAAGTCTGTGTAGATCCTACCTACCGTAATTAGGTGCATGTAACTTGTAGCTTGATAATGGTGAGACAGATAGTGGCACCTCTTCTTTTTTCTGTTTGTATTAATTTAAAAAGACAGGTCATTTAATCTTGCTAGGATCTGTTCTATCAGAAACTAATCGAAGTCTTTTTTATCTCTCAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QPbVQW/lycopersicum_combined_unigene_seqs" ref_id="SGN-U323726" ref_strand="+" ref_description="SGN-U323726        Tomato 200607 #1 [6 ESTs aligned] arabidopsis/peptide: AT5G48150.1 | Symbol: None | phytochrome A signal transduction 1 (PAT1) | chr5:19539485-19541839 REVERSE | Aliases: MIF21.4, MIF21_4 (evalue: 1e-96, score=348) genbank/nr: PAT1(evalue: 9e-95, score=348)">
      <seq>gaggtgcttgtgctaaagcaatagcggagaataatttgatcacagctgaatggttaatgtcagaactacgcacggtggtatctgtttgtgggtctcccatacaacgtttaggtgcttatatgctggaaggtttagttgctagattggcctcctcgggaagctccatctacaaggccttaaggtgcaaagagcctactagtgtcgagctattctcgtacatgcacttgctttatgaaatctgtccatacttcaagtttggatatttgtcagcaaatggtgcaattgttgatgccatgaaagatgagaactcaattcatataatcgatttccagattgctcagggtagccagtggatcaccttaatccatgctcttgcagcacggcctggtggacctccaagaatccgcatcacagggattgatgactctacatcagcttacgccagaggaggagggattgaaatcgtaggtcgaagactgtcaagcattgctgcatcttgcaatgtacctttcgaatttcatcccgtgtctgcttcttgtccagatattgagattgagcatcttaaggttcttcccggggaaccattggctgttaactttgcgctcgtcttgcaccatatgcctgatgagagcgttggaactcaaaatcacagagacagacttctgaggatggttaaaagcttatctcccaagattgttacctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184E04-z8xSb/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0184E04.1" temp_strand="-" temp_description="C07HBa0184E04.1  AC212637.1 htgs_phase:1 submitted_to_sgn_as:gi|158262132|gb|AC212637.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0184E04, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="98652" stop="97354"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98356" g_stop="97654" g_length="703"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="703" r_length="703" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184E04.1" gen_strand="-" ref_id="SGN-U323726" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>703</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184E04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U323726" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98356" e_stop="97654"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATTGCTTGTGCTAAAGCAATAGCGGAGAATAATTTGATCACAGCTGAATGGTTAATGTCAGAACTACGCACGGTGGTATCTGTTTGTGGGTCTCCCATACAACGTTTAGGTGCTTATATGCTGGAAGGTTTAGTTGCTAGATTGGCCTCCTCGGGAAGCTCCATCTACAAGGCCTTAAGGTGCAAAGAGCCTACTAGTGTCGAGCTATTCTCGTACATGCACTTGCTTTATGAAATCTGTCCATACTTCAAGTTTGGATATTTGTCAGCAAATGGTGCAATTGTTGATGCCATGAAAGATGAGAACTCAATTCATATAATCGATTTCCAGATTGCTCAGGGTAGCCAGTGGATCACCTTAATCCATGCTCTTGCAGCACGGCCTGGTGGACCTCCAAGAATCCGCATCACAGGGATTGATGACTCTACATCAGCTTACGCCAGAGGAGGAGGGATTGAAATCGTAGGTCGAAGACTGTCAAGCATTGCTGCATCTTGCAATGTACCTTTCGAATTTCATCCCGTGTCTGCTTCTTGTCCAGATATTGAGATTGAGCATCTTAAGGTTCTTCCCGGGGAACCATTGGCTGTTAACTTTGCGCTCGTCTTGCACCATATGCCTGATGAGAGCGTTGGAACTCAAAATCACAGAGACAGACTTCTGAGGATGGTTAAAAGCTTATCTCCCAAGATTGTTACCTT</genome_strand>
        <mrna_strand>GAGGTGCTTGTGCTAAAGCAATAGCGGAGAATAATTTGATCACAGCTGAATGGTTAATGTCAGAACTACGCACGGTGGTATCTGTTTGTGGGTCTCCCATACAACGTTTAGGTGCTTATATGCTGGAAGGTTTAGTTGCTAGATTGGCCTCCTCGGGAAGCTCCATCTACAAGGCCTTAAGGTGCAAAGAGCCTACTAGTGTCGAGCTATTCTCGTACATGCACTTGCTTTATGAAATCTGTCCATACTTCAAGTTTGGATATTTGTCAGCAAATGGTGCAATTGTTGATGCCATGAAAGATGAGAACTCAATTCATATAATCGATTTCCAGATTGCTCAGGGTAGCCAGTGGATCACCTTAATCCATGCTCTTGCAGCACGGCCTGGTGGACCTCCAAGAATCCGCATCACAGGGATTGATGACTCTACATCAGCTTACGCCAGAGGAGGAGGGATTGAAATCGTAGGTCGAAGACTGTCAAGCATTGCTGCATCTTGCAATGTACCTTTCGAATTTCATCCCGTGTCTGCTTCTTGTCCAGATATTGAGATTGAGCATCTTAAGGTTCTTCCCGGGGAACCATTGGCTGTTAACTTTGCGCTCGTCTTGCACCATATGCCTGATGAGAGCGTTGGAACTCAAAATCACAGAGACAGACTTCTGAGGATGGTTAAAAGCTTATCTCCCAAGATTGTTACCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QPbVQW/lycopersicum_combined_unigene_seqs" ref_id="SGN-U330037" ref_strand="+" ref_description="SGN-U330037        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: AT1G50600.1 | Symbol: None | scarecrow-like transcription factor 5 (SCL5), similar to SCARECROW GB:AAB06318 GI:1497987 from (Arabidopsis thaliana) | chr1:18740800-18743215 REVERSE | Aliases: F11F12.8, F11F12_8 (evalue: 3e-09, score=59.3) genbank/nr: putative(evalue: 2e-16, score=89.7)">
      <seq>tgaaaatgaagtttgattttttttttctctgactttctttttagtattttcttcaccactagtggcttactaaaaatggaatatgcgttgtctaaagttaagctttttttctctgattatttcattaaccatgttcttcaatctttttgcttaagatttcttctctgagtatcaggatagttggatctttgaaatgtgttatggatgtgaatgttaaagcttggagctggtgaactttttgtaacgaggcggggtgtatgctggaaatgtttctgttgtcttctggatatctatgatgtgctaaacggttagataatatttcacgatgaggccttctcagaaccctgaggaaatcaacgagttcaacaaattctataaccaacccatagagtatcaagaatcctatttcctgccttccgttaacaatccgaacaacaaccaatcgttctatgctgatgtctctgccttaaaacccgcccaacactgttatgttgaatcatccgcgggaaattctagtgaacttgtttctgattcacctcctattgttaatttcaaccccatgatgaaccaaggttctgattcgtgtcgttcagacatgcatcattctcctgatgatacatttcagtcgtcgggtaacagttcgtgctacactagtgatgttactgacctgaagcacaagttaagggaacttgaaactgcaatgctggggccagattcagaaagcttggaatcatttaataatactatccctgtgactgcagccaatcaagttccatcagagtcggataaattggttggaatgatggagatgatgcctagcggagacttgaaagaagttctaattgcttgtgctaaagcaatagcggagaataattttgatcacagctgaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184E04-z8xSb/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0184E04.1" temp_strand="-" temp_description="C07HBa0184E04.1  AC212637.1 htgs_phase:1 submitted_to_sgn_as:gi|158262132|gb|AC212637.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0184E04, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="100738" stop="98006"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100438" g_stop="100264" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="175" r_length="175" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100263" i_stop="99021" i_length="1243">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.934" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="99020" g_stop="98306" g_length="715"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="891" r_length="716" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184E04.1" gen_strand="-" ref_id="SGN-U330037" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>890</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184E04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U330037" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100438" e_stop="100264"/>
          <exon e_start="99020" e_stop="98306"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAAATGAAGTTTGATTTTTTTTTTCTCTGACTTTCTTTTTAGTATTTTCTTCACCACTAGTGGCTTACTAAAAATGGAATATGCGTTGTCTAAAGTTAAGCTTTTTTTCTCTGATTATTTCATTAACCATGTTCTTCAATCTTTTTGCTTAAGATTTCTTCTCTGAGTATCAGGTATGCTTTCTTTCACTGTTTTTTTTTTTTGATAATCTGAAGATATGGGAAGTTATAATTGTTGTAAAAAGTTGAATCTTTTTGTGTTAACTTGATAGAAATTGAATTCTTTTGTATGAACTTGGAACCCCTTTTCATTCTTGAAAAAAAATTTGGATCTTTTTGTATAAACTTGAAAAAAAAAATTGAATCTTTTTGTATTAACTTGAAACCTATTTCATTCTTGGAAAAAAAATGGATCTTTTTGTTTTTCTTGTTTTAGTTTTTTGTTGTTGGGGTGGGGGTTCTTTATGTTTAGCTAATTCTGGTGTTAGGATGCAAGTGGTAAGCTTCAGTTCTTTATGTTTAGCTAAATTCTGGTGTTAAGATGCAAGTGGTAAGCTTCATTTCTTTGTAATTTTTAGAAAGCATTTGAGACATTTTAATTTTTTGGGTTTTGTGGATGGGAATAGTTTGTTTGCCAGTAAATCTGAGAGAAATTCAGTGAATTCTTTTTTGTTATGATGAAAATTAGGGGTTTCATTCTCTATATAGAAGATCTATAAGGCTAAGGCAGTGGGCAGTGGGTAGTGGGGACCTAACCCTTCAGCCTAGACCTTTTTAAAGTGCTTTGGTAAAAGATTGCAACTATGGTTAAAGTGCTTTTTTTTTATATGATGAAGGGTATGGGTTGAGGTTAAATGAGCTGACCCAACTTGTTTGGGTCTGAGAGTTCAGTTTTTTTCTTTTCACCCTTCCCTAGGAGCTCCGACCTTTTGGTTCCTTGGTGAGTCGAATCCGCAACCTTAAGATTGGAGGTGGAGGGTGCTTACCATCTAGGCCACCCCTCTTGTCGAGAGATAGTTGTTTGATTAAAGTGCTTTTATTTGATATGATGAAGGGTATGAATTGAGCTTAAATGAAGCTATGAGGATTCAATTAGCCGACCTTAACTTGTTTGGGACTGAGAGGTAGTTTTTTTTTTTCACCCCATGTCTAGGAGCTCCCGCCTTTTGCTCCGTTGGTGACGCAATGCTCTAACCTTAAGGTTGGAGTTGGAGGGTGTTTCCCATCTGAGCAATCCCCACTTGTCGAGAGGTAGTTACTAACTTATTATATTGGTTACAGTGCTGTTAGGACTATGAACAAAAGCGTTTGTCCAACACTTGCACTAAATTAAGTTCAAGCTGTTCTTTATAAATTGGTGTTCTTTTGATTTCTCATTAGTAACAATTGCTATGGTATTTGTTTAACTTCTCCACAGGATAGTTGGATCTTTGAAATGTGTTATGGATGTGAATGTTAAAGCTTGGAGCTGGTGAACTTTTTGTAACGAGGCGGGGTGTATGCTGGAAATGTTTCTGTTGTCTTCTGGATATCTATGATGTGCTAAACGGTTAGATAATATTTCACGATGAGGCCTTCTCAGAACCCTGAGGAAATCAACGAGTTCAACAAATTCTATAACCAACCCATAGAGTATCAAGAATCCTATTTCCTGCCTTCCGTTAACAATCCGAACAACAACCAATCGTTCTATGCTGATGTCTCTGCCTTAAAACCCGCCCAACACTGTTATGTTGAATCATCCGCGGGAAATTCTAGTGAACTTGTTTCTGATTCACCTCCTATTGTTAATTTCAACCCCATGATGAACCAAGGTTCTGATTCGTGTCGTTCAGACATGCATCATTCTCCTGATGATACATTTCAGTCGTCGGGTAACAGTTCGTGCTACACTAGTGATGTTACTGACCTGAAGCACAAGTTAAGGGAACTTGAAACTGCAATGCTGGGGCCAGATTCAGAAAGCTTGGAATCATTTAATAATACTATCCCTGTGACTGCAGCCAATCAAGTTCCATCAGAGTCGGATAAATTGGTTGGAATGATGGAGATGATGCCTAGCGGAGACTTGAAAGAAGTTCTAATTGCTTGTGCTAAAGCAATAGCGGAGAATAA-TTTGATCACAGCTGAAT</genome_strand>
        <mrna_strand>TGAAAATGAAGTTTGATTTTTTTTTTCTCTGACTTTCTTTTTAGTATTTTCTTCACCACTAGTGGCTTACTAAAAATGGAATATGCGTTGTCTAAAGTTAAGCTTTTTTTCTCTGATTATTTCATTAACCATGTTCTTCAATCTTTTTGCTTAAGATTTCTTCTCTGAGTATCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAGTTGGATCTTTGAAATGTGTTATGGATGTGAATGTTAAAGCTTGGAGCTGGTGAACTTTTTGTAACGAGGCGGGGTGTATGCTGGAAATGTTTCTGTTGTCTTCTGGATATCTATGATGTGCTAAACGGTTAGATAATATTTCACGATGAGGCCTTCTCAGAACCCTGAGGAAATCAACGAGTTCAACAAATTCTATAACCAACCCATAGAGTATCAAGAATCCTATTTCCTGCCTTCCGTTAACAATCCGAACAACAACCAATCGTTCTATGCTGATGTCTCTGCCTTAAAACCCGCCCAACACTGTTATGTTGAATCATCCGCGGGAAATTCTAGTGAACTTGTTTCTGATTCACCTCCTATTGTTAATTTCAACCCCATGATGAACCAAGGTTCTGATTCGTGTCGTTCAGACATGCATCATTCTCCTGATGATACATTTCAGTCGTCGGGTAACAGTTCGTGCTACACTAGTGATGTTACTGACCTGAAGCACAAGTTAAGGGAACTTGAAACTGCAATGCTGGGGCCAGATTCAGAAAGCTTGGAATCATTTAATAATACTATCCCTGTGACTGCAGCCAATCAAGTTCCATCAGAGTCGGATAAATTGGTTGGAATGATGGAGATGATGCCTAGCGGAGACTTGAAAGAAGTTCTAATTGCTTGTGCTAAAGCAATAGCGGAGAATAATTTTGATCACAGCTGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QPbVQW/lycopersicum_combined_unigene_seqs" ref_id="SGN-U320871" ref_strand="+" ref_description="SGN-U320871        Tomato 200607 #1 [10 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr4:9280104-9280740 FORWARD | Aliases: DL4250W, FCAALL.388(evalue: 1e-44, score=176) genbank/nr: unknown(evalue: 2e-46, score=189)">
      <seq>caatagaaggtgtgcgccaagagatgcaagctgacatggatcgtaagttgcaagaggaacaaatacagagactgaactttgcattttccgatcgtaaaattcaactggagtatccgccgccggcaagtgaccagaagaagagcagctaagaaggaagatgaatactgatatcacagcatcggcaaagcccgagtatccagttgtagatcgaaacccaccgtttactaaaaccgtcggtaatttcaacacactcgattacctccggctcaccaccatcaccgggatttctgtcaccgtcggatacctctccggaataaagccagggattagagggccatcgatggttaccggaggtttgattgggctaatgggtggtttcatgtatgcttatcagaattcagctggcaggctcatgggtttcttcccaaatgaaggagaggtagccaaagccaagtacaagatttaactgcttcccttaattttctggttcttttggattcccttttgtagtttccccaagatgttattaaaacagtgggcattctctcttctcatgagaactttgttgaaagtaataccattaataatcagtctctggttaccaacttaatatgaaaaaaaaaaatgcgatgaatcatgtattattgttacttgctaataatgatgtgttgactatgcattatttagtatgataatgttttgaaatcagcttaaatgagagaattgagatttatgtagccnannnaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184E04-z8xSb/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0184E04.1" temp_strand="-" temp_description="C07HBa0184E04.1  AC212637.1 htgs_phase:1 submitted_to_sgn_as:gi|158262132|gb|AC212637.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0184E04, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="105242" stop="76148"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104939" g_stop="104683" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="311" r_length="257" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104682" i_stop="104191" i_length="492">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104190" g_stop="103757" g_length="434"/>
          <reference_exon_boundary r_type="cDNA" r_start="312" r_stop="745" r_length="434" r_score="0.968"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="103756" i_stop="103606" i_length="151">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.995" a_score="0.36"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103605" g_stop="103531" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="746" r_stop="820" r_length="75" r_score="0.413"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184E04.1" gen_strand="-" ref_id="SGN-U320871" ref_strand="+">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>766</cumulative_length_of_scored_exons>
        <coverage percentage="0.934" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184E04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U320871" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104939" e_stop="104683"/>
          <exon e_start="104190" e_stop="103757"/>
          <exon e_start="103605" e_stop="103531"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAACAAATACAGAGACTGAACTTTGCATTTTCCGATCGTAAAATTCAACTGGAGTATCCGCCGCCGGCAAGTGACCAGAAGAAGAGCAGCTAAGAAGGAAGATGAATACTGATATCACAGCATCGGCAAAGCCCGAGTATCCAGTTGTAGATCGAAACCCACCGTTTACTAAAACCGTCGGTAATTTCAACACACTCGATTACCTCCGGCTCACCACCATCACCGGGATTTCTGTCACCGTCGGATACCTCTCCGGTAACTTCTCTATCCTTTACTGTTATCATTCATTCGATTTACTGAAGCTTAAATTGTAAATCTGTTTGGATTTGTCATTTGGATTACACTTTTTATGGAGCCGGGTAGTGCTGAGGGGTTTATCCGATTCTCCTTCGGTGGAAAGTCATATAATTTATACATGGTATATTAGATGTTGAAGCCCTTTAGCTTATTCGTGAGTTTAGTTCTTGGTATTTTGAATCACTTAGTGAAAATTCTTGTTACGTCACTGTAATTATATTTTGGGAAGGAACTAGAAGGTAGGAAGCTGGTTTGACAGAATTCAGTAGTTTTGGTTCAAATCATATATTTATCTTAAGAAATTTATGTAGACATTATTAGTTTGGAATCAGTAATTCAAAAGGAGTATAATCCTGAACCTGTAAGCTTCAAATTCAAATCCTAGCTCAGCTTGTGCTAACATAAGCAAGTTATCTCCTTTGTTATTGATAAATTTTGGATTTTGGGCAGGAATAAAGCCAGGGATTAGAGGGCCATCGATGGTTACCGGAGGTTTGATTGGGCTAATGGGTGGTTTCATGTATGCTTATCAGAATTCAGCTGGCAGGCTCATGGGTTTCTTCCCAAATGAAGGAGAGGTAGCCAAAGCCAAGTACAAGATTTAACTGCTTCCCTTAATTTTCTGGTTCTTTTGGATTCCCTTTTGTAGTTTCCCCAAGATGTTATTAAAACAGTGGGCATTCTCTCTTCTCATGAGAACTTTGTTGAAAGTAATACCATTAATAATCAGTCTCTGGTTACCAACTTAATATGATTTCTTGTGTTGCGATGAATCATGTATTATTGTTACTTGCTAATAATGATGTGTTGACTATGCATTATTTAGTATGATAATGTTTTGAAATCAGCTTAAATGAGAGAATTGAGATTTATGTAGCCAACATGTTTGGGACTCAAGATTCGCTGTTGTTATTTTTTAATCAAGTGGATCATATGCTTCACATTCTTTATGCCACCAATTGATCATAGACTGATAGAAGTATATTGGAGTTTCATTCTCTTCTTTTGGCTTGTCCTGTGTGTTCTTATTATCAGTGTTGTGAATGGCGAGCGAAAATCGAAAAGCATATATATCTGTACCTAGACACTAGAACAGCGAAAAACAATCCA</genome_strand>
        <mrna_strand>AGGAACAAATACAGAGACTGAACTTTGCATTTTCCGATCGTAAAATTCAACTGGAGTATCCGCCGCCGGCAAGTGACCAGAAGAAGAGCAGCTAAGAAGGAAGATGAATACTGATATCACAGCATCGGCAAAGCCCGAGTATCCAGTTGTAGATCGAAACCCACCGTTTACTAAAACCGTCGGTAATTTCAACACACTCGATTACCTCCGGCTCACCACCATCACCGGGATTTCTGTCACCGTCGGATACCTCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATAAAGCCAGGGATTAGAGGGCCATCGATGGTTACCGGAGGTTTGATTGGGCTAATGGGTGGTTTCATGTATGCTTATCAGAATTCAGCTGGCAGGCTCATGGGTTTCTTCCCAAATGAAGGAGAGGTAGCCAAAGCCAAGTACAAGATTTAACTGCTTCCCTTAATTTTCTGGTTCTTTTGGATTCCCTTTTGTAGTTTCCCCAAGATGTTATTAAAACAGTGGGCATTCTCTCTTCTCATGAGAACTTTGTTGAAAGTAATACCATTAATAATCAGTCTCTGGTTACCAACTTAATATGAAAAAAAAAAATGCGATGAATCATGTATTATTGTTACTTGCTAATAATGATGTGTTGACTATGCATTATTTAGTATGATAATGTTTTGAAATCAGCTTAAATGAGAGAATTGAGATTTATGTAGCCNANNN.......................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QPbVQW/lycopersicum_combined_unigene_seqs" ref_id="SGN-U331538" ref_strand="+" ref_description="SGN-U331538        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | CBS domain-containing protein / transporter associated domain-containing protein, similar to SP:Q54318 Hemolysin C (Serpulina hyodysenteriae) {Treponema hyodysenteriae}; contains Pfam profiles PF00571: CBS domain, PF03471: Transporter associated domain, PF01595: Domain of unknown function | chr3:4191518-4195119 REVERSE | Aliases: MJG19.2(evalue: 1e-109, score=392) genbank/nr: gi|15230685|ref|NP_187914.1| hemolysin-related [Arabidopsis thaliana] gi|10172594|dbj|BAB01398.1| unnamed protein product [Arabidopsis thaliana](evalue: 7e-108, score=392)">
      <seq>ggaatgctaaaactcctcggcttgaaaggaagaagtgaaccatatgtcactgaggatgaattgaagttgatgctgcgtggggcggagttaagtggcgcaattgaggaggaagagcaggatatgattgaaaatgtgttggagattaaagacactcatgtcagggaggtaatgacacctcttgttgatgttgttgcaatcgatgccagtgcaacgttagttgatttccatagtttgtgggtgacacatcagtactccagggtgcccgtttttgagcaacgtatagataatattgttggcattgcatatgccatggatctcctagattatgtacaaaagggagaactgctggaaagttctattgtgggagacattgcacataaacctgcatactttgttcccgattctatgtcagtgtggaaccttcttagagagttccgcatcagaaaggtacacatggctgttgctcttaatgaatatggaggaaccataggaattgtaacccttgaagatgtggtcgaggaaattgttggcgaaatctttgacgaaaatgattcataagaggaaatccacaaaatgactggctatattgtcatgcgggctgaaggaatatacgatgttgatgcacatacctccattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184E04-z8xSb/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0184E04.1" temp_strand="-" temp_description="C07HBa0184E04.1  AC212637.1 htgs_phase:1 submitted_to_sgn_as:gi|158262132|gb|AC212637.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0184E04, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="125961" stop="120941"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125661" g_stop="125627" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="35" r_length="35" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125626" i_stop="124536" i_length="1091">
            <donor d_prob="0.993" d_score="0.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="124535" g_stop="124454" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="36" r_stop="117" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="124453" i_stop="122708" i_length="1746">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="122707" g_stop="122568" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="118" r_stop="257" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="122567" i_stop="122481" i_length="87">
            <donor d_prob="0.575" d_score="1.00"/>
            <acceptor a_prob="0.656" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="122480" g_stop="122402" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="258" r_stop="336" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="122401" i_stop="122294" i_length="108">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="122293" g_stop="122230" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="337" r_stop="400" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="122229" i_stop="121761" i_length="469">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="121760" g_stop="121669" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="492" r_length="92" r_score="0.978"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="121668" i_stop="121535" i_length="134">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="121534" g_stop="121469" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="493" r_stop="558" r_length="66" r_score="0.985"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="121468" i_stop="121321" i_length="148">
            <donor d_prob="0.992" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="121320" g_stop="121241" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="559" r_stop="637" r_length="79" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184E04.1" gen_strand="-" ref_id="SGN-U331538" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>638</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184E04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U331538" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125661" e_stop="125627"/>
          <exon e_start="124535" e_stop="124454"/>
          <exon e_start="122707" e_stop="122568"/>
          <exon e_start="122480" e_stop="122402"/>
          <exon e_start="122293" e_stop="122230"/>
          <exon e_start="121760" e_stop="121669"/>
          <exon e_start="121534" e_stop="121469"/>
          <exon e_start="121320" e_stop="121241"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAATGCTAAAACTCCTCGGCTTGAAAGGAAGAAGGTAGGGTGATCATAAATCAAGTCTTGCTATTTTTCATGAGCTCTGCCTCACAGTGTTAATCTTTTTTACTATTCTTTCAGTTGGAATATGTATATCATAATTTATATTTTTGTGAGCATATTTACGAAACACACTCTTATAATATTTCTAATCGATCATGTAATTCTGAATATGGCAAGTTCACATGCATGTCTTATTTGAAAGGCTATCTACATTATACATGCTTATCCTTAGAAATCATTGTGAGCAATCTGCTGTTTTTTTTTTAATTACATAAATGCATTATTGTCAAAAGATACATGAAAAGCATAAGGTTTTCTCTCCACATAATTTAGATTTCCAAGGGCCCGTTTAGACATGATTTGATGATTTGAAATTGAAATTTTGCTTGGACATGTCATTTGGGTTTCTTAAGTTGTATTTTTTCTCATAAACATAACGAGAACCCAACAATTTGTGGAAATTATCTTGGGTAATCCTCTCCCCATGAGCTAACTTTAGGGGTTGAGTTAGACCCAAAATTCATTTCTTATCGTGAATTAGAGTCGATGTGAGCCCCCTGTTAGTTTTCACGCCCATGGACCAGATAGAGTCGGGCAGATGGGATGGGGGTGGGGGTGATGGAATGAATCCCACATCAAAGGTGAACGAATTGAATTGGGGTCTCATATGGTCAGTGCAATCTTCCTCTTTGAGCAGCTTTTGGGTTGAGTAAAATAAACTGAAATCCTACTTTTTCGAGCCCCAAATCCTATGGCCAAACAACTATTAAGCGTTCTCATCCATAATAACTTGTAGAAAAGTTAAAACTATGTTTATAAATACAATATGTGAAAAGTCTTGGGGTCTCACATTGGTTGAGGGTATGGGCAATAGTCTCAGTCCAAATATTTTATTTTGATAAAATATATATTATTAGAAAAGGAACCAGTACTCTTGGTACTGAAATTACAAACAAGCTGACAGAAGTTAGTTGGATCCTCCTTCACTTTTGTCTCTAACCATTCTAAATCCAGCATTGATTTTACATCATTCTCATTTGCCAAAACTTTAAGTTGCGTCACTAAATTTATATTCATTTTGGTATCTAGTGAACCATATGTCACTGAGGATGAATTGAAGTTGATGCTGCGTGGGGCGGAGTTAAGTGGCGCAATTGAGGAGGAAGAGCAGGTGAGTTCATGTGTTTTCTGGGTTTCTGTTTTTTATGCTTGAACCTCAACTGTTACCAAATATGAACCAGTGAAGCACATGCATATTCTAATCATACATAAGCTTGTCTAGTTCACATAGAATTTGTTGTCCATTAGAATAGCCTTCATGTATGTGACCATTGTACCAAATGCAGCATCTTGAGATGTGTTTATCATGTCCATTTGAATGAGCACTATTTTAGCACTCTCTGTGTTTTGTTCTTATCTTGCATGTTATTATTGGAGATTCATGGTGACATAGTTGGAAGTCGATGGAGCCAGTGTTATCAAAGGCGAAAAATGCAAAAAAACAAAACTAAGGTCTATTGGTGCTTTGAGCACAAATAAAGCATGGACCTTGAAGAAGAAAGAAGTGAGTGGAAAAAAATACAAATATGTTTGCATGGTCCAAGACTAATAATTGTAAGCATGAATAACAAATCTAAGAACAAAGAAATTGAAAAATGTTTACGACGAAGTGAAATATCACTTGTGTAGTATCAGCTCTTCAGGGTTACACGAATTGTCAAGGAGAAGTGCCTTAGATCCTTGATGTTGAGACTGAAGCACAGGTAAAGCGTGGCTGACCGCACTTTAGGCGCGCTTTGACAACACTGAATGTAGCTACATACAAGTGTATTATTTTACTCTCTTTAAAAGACAACAAAATATATGACCTAAACATTAATGAGAGAGTTATGCTAATGATTTTTTCTTGGGAAGAACTGTCAAACAAACATAACATCCAAAACATGAAGAAATGATTGACAAAAAATTTCACCCTGCTTCTTCTATGCACCACCTTACTCATGCCCTCCAATGTTACATCTGCTGTATAATTGGTGCTGAAGCCAGTGCTTTGTGCCTTGGCTCGTCTTCTCTGGAAGAGGAAGGCTTTGTTCGATTTTGCCTTGACATGCATCTTCAGCCTACCACATTGTTTCCCTTGGCCAAAAAAATGACTTTGTGGTTTAAGACACAGCTGCCACCTTTTACAGGAATTTAGCATGCCATCTTTGATGGATTTTTTTTGGAGCTTAAAAACAGTTGGATTAAGCAGTTTTGGTTTAAATAAGCCAAAAATGCTTAAAAGTTGATTTGACCAGCTTTGAATATATTTCTCTGATTTTTCTTACTTTGTTGATTTCCATGCAGAAGTAGGTATCTTTTGTAACTTACTCGTGCGTTGGTTTGCACTTGTAGTATTTTGTTGTACTATCAGTTTTATCATCTTTCCCTTTACAAATTAATTCTCATTCTTTTAGACACAACTATGGGAACACAATCTATCTCAAATAAATAATACGTTGATTCCTGCATAACTTATGCAAGTATTATTTATGAGGAAAACAAAAAGGAGCAACCAAATGTTGATTTTATGACTTTCTGTGAGACTAAATCTCCTCAAATCTTAACCAAACACTATCATCTTTTGCTTGCTTTTATGGGGAGATAATATCTCCTAAAATAAAGCCTGACCCATTAATGTCTGTCCTCTTGCAGGACATGGCTGAAAATGTGTTGTCTTGCAAGTGACATGAGTTCTGCTGTAATTTTTTTAATTTTATTTTGGTTTGGTAATGACAGTGACATGAGTTGTGCTTAAATGGAGACGTGAGGATTCATATAGCCAATCCCAACTTGTTTGGGACTGGGGCAGAGCAATTGATATATATCTCCTAAAACTTAATTCAGATGAACCTTCTATGGCTCTGTTTTCTTGCAGGATATGATTGAAAATGTGTTGGAGATTAAAGACACTCATGTCAGGGAGGTAATGACACCTCTTGTTGATGTTGTTGCAATCGATGCCAGTGCAACGTTAGTTGATTTCCATAGTTTGTGGGTGACACATCAGTACTCCAGGTCTGATAGACTTTTAATTGCTTGTTTTTGCATAGAGAAGAAGTTTCCTTCAAAAGGTGCTAAAAGAGTTTGGCTATGAATTTTCAGGGTGCCCGTTTTTGAGCAACGTATAGATAATATTGTTGGCATTGCATATGCCATGGATCTCCTAGATTATGTACAAAAGGTTTAGCATCCACAACTTCAGCCAGTCTCTTTCAAAATTATCGTGGTGTCATTTCTAATTGAACACATAAATTTCATAGCATGCTGAAAATTCTCTTTAATTTTGAAGGGAGAACTGCTGGAAAGTTCTATTGTGGGAGACATTGCACATAAACCTGCATACTTTGTTCCCGGTAATTTACATTTCTTCCTGATGTTGACTGATGTATAAATAAGAAATTGTAGTTCTATGTCACCTAAACCATGGATCTGCAAAGTCAATAATTTAAATTACTGATATAAGTTGCTGATCAGTAGGTATTTTAAGTACCACTTCATATCCTTATCAGAGACGTCATGTACTGTCTACCATAACTAAATCAACAAATAGATGTACATACTTTTTAGTATAATTAACAATACCGAAGCCACTTTGCTGACTGTAGTACTGCCTTTCAGATTCTCACACTGTTGAGATGTGATTTATTCCTATTTAACCAGCTGCCATCGGCGGGAATCATTCTTATTTCCTAGAATCTGTCTCCCTTAAAACATTATGATTTTATGCTTTATGCTTATAAAATGCATAAACATTGCTCGTGTTTTCTTTCCACTCACAATAGTACCCAAGGAGGCAAACAAAGTAATCTTGTAACAATGCAGATTCTATGTCAGTGTGGAACCTTCTTAGAGAGTTCCGCATCAGAAAGGTACACATGGCTGTTGTTCTTAATGAATATGGAGGAACCATTGGAGTAAGTTTTCTCTCTCATCGTTTCTGTTTCTTGGTTGTAGTGCTTTGTTAATTCCATCAAAATTTCTTATCCACTGTGTGTATCTATCATTTAATTATCTATAACAATGTCTTCACATTATCTCTATGAAACAGATTGTAACCCTTGAAGATGTGGTCGAGGAAATTGTTGGCGAAATCTTTGACGAAAATGATTCAAAAGTAAGACTTATGAGTCCCTCTTTCCACTTCTCTGAACAGCTAGTTATTTGTAGGTTCATAGTTACCTCTGATGGATACCCCTCTTCAGTTATAGAATACATAGATATTTAGTATGTGGAAGTATATGTATTTTCTTGTTGCGTGACAGGAGGAAATCCAAGAAAAAAACTGGCTATATTGTCATGCGGGCTGAGGGAATATACGATGTTGATGCAAATACCTCCATTG</genome_strand>
        <mrna_strand>GGAATGCTAAAACTCCTCGGCTTGAAAGGAAGAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACCATATGTCACTGAGGATGAATTGAAGTTGATGCTGCGTGGGGCGGAGTTAAGTGGCGCAATTGAGGAGGAAGAGCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATGATTGAAAATGTGTTGGAGATTAAAGACACTCATGTCAGGGAGGTAATGACACCTCTTGTTGATGTTGTTGCAATCGATGCCAGTGCAACGTTAGTTGATTTCCATAGTTTGTGGGTGACACATCAGTACTCCAG.......................................................................................GGTGCCCGTTTTTGAGCAACGTATAGATAATATTGTTGGCATTGCATATGCCATGGATCTCCTAGATTATGTACAAAAG............................................................................................................GGAGAACTGCTGGAAAGTTCTATTGTGGGAGACATTGCACATAAACCTGCATACTTTGTTCCCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTATGTCAGTGTGGAACCTTCTTAGAGAGTTCCGCATCAGAAAGGTACACATGGCTGTTGCTCTTAATGAATATGGAGGAACCATAGGA......................................................................................................................................ATTGTAACCCTTGAAGATGTGGTCGAGGAAATTGTTGGCGAAATCTTTGACGAAAATGATTCATAA....................................................................................................................................................GAGGAAATCC-ACAAAATGACTGGCTATATTGTCATGCGGGCTGAAGGAATATACGATGTTGATGCACATACCTCCATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QPbVQW/lycopersicum_combined_unigene_seqs" ref_id="SGN-U322078" ref_strand="+" ref_description="SGN-U322078        Tomato 200607 #1 [8 ESTs aligned] arabidopsis/peptide: | Symbol: None | ABC transporter family protein, almost identical to MRP-like ABC transporter GI:2316016 from (Arabidopsis thaliana); contains Pfam profile: PF00005 ABC transporter | chr3:4195793-4201272 REVERSE | Aliases: MJG19.26(evalue: 8e-110, score=394) genbank/nr: gi|15230686|ref|NP_187915.1| ABC transporter family protein [Arabidopsis thaliana] gi|10172595|dbj|BAB01399.1| multidrug resistance-associated protein (MRP); ABC-transoprter [Arabidopsis thaliana](evalue: 6e-108, score=394)">
      <seq>ccatctcgtggagaggttgagttcaacaatcttcaggtccgatatgctccacacatgcctctcgtgttacgaggacttacatgcactttctttggtgggaagaagactggaattgttggtaggacaggcagtggtaaatcaactttaatacagacccttttccgcatagttgatcctgttgttggacaaataaagatagatggtaccaacatctccacaattggtctgcatgatctgcggtctagattgagtatcattccgcaggatccgactatgtttgagggaactgtacgcagcaacctagatccgctcgaagagcattcagatgatcaaatttgggaggcgctggacaaatgtcaactaggagacgaagttaggaagaaggaaggcaagctatattctacagtatctgagaatggagagaactggagcgtaggccaaaggcagctggtctgtcttggccgcgtgctactcaaaaaaagcaaggtccttgtcctagacgaggctacagcatctgttgacactgcaactgacaatctaattcagcaaactctgaggctgcacttcactgattccactgttataaccatcgctcataggataacatctgttcttgatagtgacatggtcctactattagaacacgggctgattgctgaatatgacactccaggcaagttattagagaacgaatcctcgttgtttgccaagctcgtggctgagtatagtatgagatcaaattcaagttttgagaatgcctcagacacatgaatctttcattgaccacgttatacgatgatgatgatgaaaactagtacacatgaatctcagacactaacactcttttgagtttccatccgtggacgatagagcttgaacaagaacccgcgaaatgcagctcattgcatgtgacttgagggaaactgcaacaatcttatggcagtgaaagaagttcatctatttgtgcaatattgatagtgaaatggcatctgttttctttagactttttgatgtgaaaaaatgttttaagtatttgtttaccaataatttgaatgtatgttgagtcaattgattagttagttaagagtgcacggattttgttccttattgtaaaagtagtaaaactttttgtattgagttggaagtgaacttacaagtgttagaattttctctacaagcaaaactgaaatactttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184E04-z8xSb/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0184E04.1" temp_strand="-" temp_description="C07HBa0184E04.1  AC212637.1 htgs_phase:1 submitted_to_sgn_as:gi|158262132|gb|AC212637.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0184E04, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="130943" stop="128797"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="130643" g_stop="130608" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="36" r_length="36" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="130607" i_stop="130519" i_length="89">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="130518" g_stop="130213" g_length="306"/>
          <reference_exon_boundary r_type="cDNA" r_start="37" r_stop="342" r_length="306" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="130212" i_stop="130117" i_length="96">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="130116" g_stop="130053" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="406" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="130052" i_stop="129971" i_length="82">
            <donor d_prob="0.948" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="129970" g_stop="129731" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="407" r_stop="646" r_length="240" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="129730" i_stop="129649" i_length="82">
            <donor d_prob="0.582" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="129648" g_stop="129097" g_length="552"/>
          <reference_exon_boundary r_type="cDNA" r_start="647" r_stop="1197" r_length="551" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184E04.1" gen_strand="-" ref_id="SGN-U322078" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1198</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184E04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U322078" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="130643" e_stop="130608"/>
          <exon e_start="130518" e_stop="130213"/>
          <exon e_start="130116" e_stop="130053"/>
          <exon e_start="129970" e_stop="129731"/>
          <exon e_start="129648" e_stop="129097"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATCTCGTGGAGAGGTTGAGTTCAACAATCTTCAGGTAAATTGAGTTGTTCTCTGGTATTATGCAGGTAGAGTGCATTATTGTTGATTCATTGTATGTGTTGATAAATCTGAAAAATTTTATAGGTCCGATATGCTCCACACATGCCTCTCGTGTTACGAGGACTTACATGCACTTTCTTTGGTGGGAAGAAGACTGGAATTGTTGGTAGGACAGGCAGTGGTAAATCAACTTTAATACAGACCCTTTTCCGCATAGTTGATCCTGTTGTTGGACAAATAAAGATAGATGGTACCAACATCTCCACAATTGGTCTGCATGATCTGCGGTCTAGATTGAGTATCATTCCGCAGGATCCGACTATGTTTGAGGGAACTGTACGCAGCAACCTAGATCCGCTCGAAGAGCATTCAGATGATCAAATTTGGGAGGTAACAGCTTAGTTTGCCTATTTCTAGAATTTTGGTTTCACATTGGAAAATGAAACTTTTATGTATTGAGAAACTTTATTCAATTTTATGTTTCAGGCGCTGGACAAATGTCAACTAGGAGACGAAGTTAGGAAGAAGGAAGGCAAGCTATATTCTACAGGTTAGAACCACATCATGTTCCGATGATTTCCACATTTAAAGCTGTGACACTTATAATGCTTATATTCTTTGGATTGCTGCAGTATCTGAGAATGGAGAGAACTGGAGCGTAGGCCAAAGGCAGCTGGTCTGTCTTGGCCGCGTGCTACTCAAAAAAAGCAAGGTCCTTGTCCTAGACGAGGCTACAGCATCTGTTGACACTGCAACTGACAATCTAATTCAGCAAACTCTGAGGCTGCACTTCACTGATTCCACTGTTATAACCATCGCTCATAGGATAACATCTGTTCTTGATAGTGACATGGTCCTACTATTAGAACACGGTATGAATCAACATTTGCATTTTTTGAACAAACGGAGGTGGAAATTCTTGGTATTTACTTTCTTTTGTTTGCTATACTACAGGGCTGATTGCTGAATATGACACTCCAGGCAAGTTATTAGAGAACGAATCCTCGTTGTTTGCCAAGCTCGTGGCTGAGTATAGTATGAGATCAAATTCAAGTTTTGAGAATGCCTCAGACACATGAATCTTTCATTGACCACGTTATACGATGATGATGATGAAAACTAGTACACATGAATCTCAGACACTAACACTCTTTTGAGTTTCCATCCGTGGACGATAGAGCTTGAACAAGAACCCGCGAAATGCAGCTCATTGCATGTGACTTGAGGGAAACTGCAACAATCTTATGGCAGTGAAAGAAGTTCATCTATTTGTGCAATATTGATAGTGAAATGGCATCTGTTTTCTTTAGACTTTTTGATGTGAAAAAATGTTTTAAGTATTTGTTTACCAATAATTTGAATGTATGTTGAGTCAATTGATTAGTTAGTTAAGAGTGCACGGATTTTGTTCCTTATTGTAAAAGTAGTAAAACTTTTTGTATTGAGTTGGAAGTGAACTTACAAGTGTTTGAATTTTTCTCTACAAGCAAAACTGAAATACTTTTA</genome_strand>
        <mrna_strand>CCATCTCGTGGAGAGGTTGAGTTCAACAATCTTCAG.........................................................................................GTCCGATATGCTCCACACATGCCTCTCGTGTTACGAGGACTTACATGCACTTTCTTTGGTGGGAAGAAGACTGGAATTGTTGGTAGGACAGGCAGTGGTAAATCAACTTTAATACAGACCCTTTTCCGCATAGTTGATCCTGTTGTTGGACAAATAAAGATAGATGGTACCAACATCTCCACAATTGGTCTGCATGATCTGCGGTCTAGATTGAGTATCATTCCGCAGGATCCGACTATGTTTGAGGGAACTGTACGCAGCAACCTAGATCCGCTCGAAGAGCATTCAGATGATCAAATTTGGGAG................................................................................................GCGCTGGACAAATGTCAACTAGGAGACGAAGTTAGGAAGAAGGAAGGCAAGCTATATTCTACAG..................................................................................TATCTGAGAATGGAGAGAACTGGAGCGTAGGCCAAAGGCAGCTGGTCTGTCTTGGCCGCGTGCTACTCAAAAAAAGCAAGGTCCTTGTCCTAGACGAGGCTACAGCATCTGTTGACACTGCAACTGACAATCTAATTCAGCAAACTCTGAGGCTGCACTTCACTGATTCCACTGTTATAACCATCGCTCATAGGATAACATCTGTTCTTGATAGTGACATGGTCCTACTATTAGAACACG..................................................................................GGCTGATTGCTGAATATGACACTCCAGGCAAGTTATTAGAGAACGAATCCTCGTTGTTTGCCAAGCTCGTGGCTGAGTATAGTATGAGATCAAATTCAAGTTTTGAGAATGCCTCAGACACATGAATCTTTCATTGACCACGTTATACGATGATGATGATGAAAACTAGTACACATGAATCTCAGACACTAACACTCTTTTGAGTTTCCATCCGTGGACGATAGAGCTTGAACAAGAACCCGCGAAATGCAGCTCATTGCATGTGACTTGAGGGAAACTGCAACAATCTTATGGCAGTGAAAGAAGTTCATCTATTTGTGCAATATTGATAGTGAAATGGCATCTGTTTTCTTTAGACTTTTTGATGTGAAAAAATGTTTTAAGTATTTGTTTACCAATAATTTGAATGTATGTTGAGTCAATTGATTAGTTAGTTAAGAGTGCACGGATTTTGTTCCTTATTGTAAAAGTAGTAAAACTTTTTGTATTGAGTTGGAAGTGAACTTACAAGTGTTAGAA-TTTTCTCTACAAGCAAAACTGAAATACTTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QPbVQW/lycopersicum_combined_unigene_seqs" ref_id="SGN-U346735" ref_strand="+" ref_description="SGN-U346735        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | ABC transporter family protein, almost identical to MRP-like ABC transporter GI:2316016 from (Arabidopsis thaliana); contains Pfam profile: PF00005 ABC transporter | chr3:4195793-4201272 REVERSE | Aliases: MJG19.26(evalue: 1e-84, score=287) genbank/nr: gi|42733544|dbj|BAD11207.1| multidrug resistance-associated protein [Thlaspi caerulescens] (evalue: 4e-83, score=288)">
      <seq>atcattgcagtaatgtcacaagtcgcatggcagatcttcatagtctttatcccagtcattgcaatttgcatttggttggagcaatattacatccctgcagcacgagaactggcacgtctaaatgggacatgcaaagctccagtaatacagcattttgctgaaacaatttcaggatcaagcacaattcgaagtttcgatcaagaatctagattccaggatgcaagcatgagattaatagacaattattctcggcctaagtttcacacagctgctgcgatggagtggctttgcatgcgtttggatatgttatctctgattacttttgctttcgcgttgattttcttgatctctcttcctgttggaacaatcgatccaagtgttgctggcttagctgttacatatggacttaatctaaacgtactgcaagcttgggttgtatggaatctttgtatgatggaaaataaaattatttccgtcgaaagaatacttcagtatgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0184E04-z8xSb/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0184E04.1" temp_strand="-" temp_description="C07HBa0184E04.1  AC212637.1 htgs_phase:1 submitted_to_sgn_as:gi|158262132|gb|AC212637.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0184E04, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="131701" stop="130400"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="131401" g_stop="131321" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="81" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="131320" i_stop="131221" i_length="100">
            <donor d_prob="0.847" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="131220" g_stop="130926" g_length="295"/>
          <reference_exon_boundary r_type="cDNA" r_start="82" r_stop="376" r_length="295" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="130925" i_stop="130823" i_length="103">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="130822" g_stop="130700" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="377" r_stop="499" r_length="123" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0184E04.1" gen_strand="-" ref_id="SGN-U346735" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>499</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0184E04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U346735" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="131401" e_stop="131321"/>
          <exon e_start="131220" e_stop="130926"/>
          <exon e_start="130822" e_stop="130700"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCATTGCAGTAATGTCACAAGTCGCATGGCAGATCTTCATAGTCTTTATCCCAGTCATTGCAATTTGCATTTGGTTGGAGGTTGCTACTTTGCTTTTTTCTATTCTCTGAATTTTATTACTTTAGTGGCGTATGTGAACATGAATTATATAATTAAGTGGTGTGTTTTGTTTAATTGCAGCAATATTACATCCCTGCAGCACGAGAACTGGCACGTCTAAATGGGACATGCAAAGCTCCAGTAATACAGCATTTTGCTGAAACAATTTCAGGATCAAGCACAATTCGAAGTTTCGATCAAGAATCTAGATTCCAGGATGCAAGCATGAGATTAATAGACAATTATTCTCGGCCTAAGTTTCACACAGCTGCTGCGATGGAGTGGCTTTGCATGCGTTTGGATATGTTATCTCTGATTACTTTTGCTTTCGCGTTGATTTTCTTGATCTCTCTTCCTGTTGGAACAATCGATCCAAGTGAGTGCTCTATCTTCATCAGGTTTTCATTCCATCAAATTTGTTAAATAGTTCTAAAGAGTACAATCTCACCTATGTTTTCACCTTGTTCCTGCCCTTACAGGTGTTGCTGGCTTAGCTGTTACATATGGACTTAATCTAAACGTACTGCAAGCTTGGGTTGTATGGAATCTTTGTATGATGGAAAATAAAATTATTTCCGTCGAAAGAATACTTCAGTATGCTG</genome_strand>
        <mrna_strand>ATCATTGCAGTAATGTCACAAGTCGCATGGCAGATCTTCATAGTCTTTATCCCAGTCATTGCAATTTGCATTTGGTTGGAG....................................................................................................CAATATTACATCCCTGCAGCACGAGAACTGGCACGTCTAAATGGGACATGCAAAGCTCCAGTAATACAGCATTTTGCTGAAACAATTTCAGGATCAAGCACAATTCGAAGTTTCGATCAAGAATCTAGATTCCAGGATGCAAGCATGAGATTAATAGACAATTATTCTCGGCCTAAGTTTCACACAGCTGCTGCGATGGAGTGGCTTTGCATGCGTTTGGATATGTTATCTCTGATTACTTTTGCTTTCGCGTTGATTTTCTTGATCTCTCTTCCTGTTGGAACAATCGATCCAA.......................................................................................................GTGTTGCTGGCTTAGCTGTTACATATGGACTTAATCTAAACGTACTGCAAGCTTGGGTTGTATGGAATCTTTGTATGATGGAAAATAAAATTATTTCCGTCGAAAGAATACTTCAGTATGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>21</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="8147" PGL_stop="18173"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="8147" e_stop="8681"/>
            <exon e_start="12931" e_stop="12958"/>
            <exon e_start="13145" e_stop="13167"/>
            <exon e_start="17181" e_stop="17221"/>
            <exon e_start="18141" e_stop="18173"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.998"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.857"/>
          <exon-intron don_prob="0.567" acc_prob="0.828" e_score="0.739"/>
          <exon-intron don_prob="0.472" acc_prob="0.000" e_score="0.683"/>
          <exon-only e_score="0.545"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="8147" e_stop="8681" e_length="535"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="8682" i_stop="12930" i_length="4249"/>
          </intron>
          <exon e_serial="2" e_score="0.857">
            <gDNA_exon_boundary e_start="12931" e_stop="12958" e_length="28"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="12959" i_stop="13144" i_length="186"/>
          </intron>
          <exon e_serial="3" e_score="0.739">
            <gDNA_exon_boundary e_start="13145" e_stop="13167" e_length="23"/>
          </exon>
          <intron i_serial="3" don_prob="0.567" acc_prob="0.828">
            <gDNA_intron_boundary i_start="13168" i_stop="17180" i_length="4013"/>
          </intron>
          <exon e_serial="4" e_score="0.683">
            <gDNA_exon_boundary e_start="17181" e_stop="17221" e_length="41"/>
          </exon>
          <intron i_serial="4" don_prob="0.472" acc_prob="0.000">
            <gDNA_intron_boundary i_start="17222" i_stop="18140" i_length="919"/>
          </intron>
          <exon e_serial="5" e_score="0.545">
            <gDNA_exon_boundary e_start="18141" e_stop="18173" e_length="33"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8147" stop="8681"/>
              <exon start="12931" stop="12958"/>
              <exon start="13145" stop="13167"/>
              <exon start="17181" stop="17221"/>
              <exon start="18141" stop="18173"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U316923" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAAAATGGCTAAATCATATAGTACAATGATTTTTTTGCTTTTTGCACTGATTATCACAGTACAAATTGCAACAATAAATGCTGCAGAAACACCAGAAGTTATTTGCAAGGTCACAATCAATGACCTTATGCTATGTTTACCTGCAGTAATGGGGAAGAGACCTCCGAAACCGACGCCGGATTGTTGCGCAGTGCTACGCAAGGCTGATTTACAGTGTATGTGCAACCAGAAATCTGAGTTGGGGAAATTTGGAATCAGTCCTGAAGCTGCAATGAATCTGCCTAAGCAATGTAAAATTAAGGTTCCCGATGGATGTTAACATCTGCGTACACTCTATTCTCTCCAATTTCTACTTGTGGGATTTTAGTGCGTATGCTAGAGAAGTGTTGGGACTAATTAAGAAAAAAGAGCATGTATTTTTACCTGATTTTGTTTTGAATTGTTTCGCTTCACTTTGTGAAGTTTGACATTTTTTTTTTTTATGTGCGTTTGTAATTTCTGGTATTTGAGAATTTAAATAAACTTTCTTTGAGTT : AAAAACAAAAACAAAAATAAAAACAAAA : AATAAAAAGAAATACACAAAAAC : AAGAAGAAAGGGGACAAAAGAAAAAAAAAGCATAAACAAAT : AAAAATGGATCGGGTCAGAAGTGGGTCCCACGA</gDNA_template>
            <first_frame> Q  N  G  *  I  I  *  Y  N  D  F  F  A  F  C  T  D  Y  H  S  T  N  C  N  N  K  C  C  R  N  T  R  S  Y  L  Q  G  H  N  Q  *  P  Y  A  M  F  T  C  S  N  G  E  E  T  S  E  T  D  A  G  L  L  R  S  A  T  Q  G  *  F  T  V  Y  V  Q  P  E  I  *  V  G  E  I  W  N  Q  S  *  S  C  N  E  S  A  *  A  M  *  N  *  G  S  R  W  M  L  T  S  A  Y  T  L  F  S  P  I  S  T  C  G  I  L  V  R  M  L  E  K  C  W  D  *  L  R  K  K  S  M  Y  F  Y  L  I  L  F  *  I  V  S  L  H  F  V  K  F  D  I  F  F  F  Y  V  R  L  *  F  L  V  F  E  N  L  N  K  L  S  L  S   : *  K  Q  K  Q  K  *  K  Q  K :   I  K  R  N  T  Q  K   : Q  E  E  R  G  Q  K  K  K  K  A  *  T  N  :  K  N  G  S  G  Q  K  W  V  P  R </first_frame>
            <second_frame>  K  M  A  K  S  Y  S  T  M  I  F  L  L  F  A  L  I  I  T  V  Q  I  A  T  I  N  A  A  E  T  P  E  V  I  C  K  V  T  I  N  D  L  M  L  C  L  P  A  V  M  G  K  R  P  P  K  P  T  P  D  C  C  A  V  L  R  K  A  D  L  Q  C  M  C  N  Q  K  S  E  L  G  K  F  G  I  S  P  E  A  A  M  N  L  P  K  Q  C  K  I  K  V  P  D  G  C  *  H  L  R  T  L  Y  S  L  Q  F  L  L  V  G  F  *  C  V  C  *  R  S  V  G  T  N  *  E  K  R  A  C  I  F  T  *  F  C  F  E  L  F  R  F  T  L  *  S  L  T  F  F  F  F  M  C  V  C  N  F  W  Y  L  R  I  *  I  N  F  L  *  V  :  K  N  K  N  K  N  K  N  K   : K  *  K  E  I  H  K  N  :  K  K  K  G  D  K  R  K  K  K  H  K  Q  I :   K  M  D  R  V  R  S  G  S  H   </second_frame>
            <third_frame>   K  W  L  N  H  I  V  Q  *  F  F  C  F  L  H  *  L  S  Q  Y  K  L  Q  Q  *  M  L  Q  K  H  Q  K  L  F  A  R  S  Q  S  M  T  L  C  Y  V  Y  L  Q  *  W  G  R  D  L  R  N  R  R  R  I  V  A  Q  C  Y  A  R  L  I  Y  S  V  C  A  T  R  N  L  S  W  G  N  L  E  S  V  L  K  L  Q  *  I  C  L  S  N  V  K  L  R  F  P  M  D  V  N  I  C  V  H  S  I  L  S  N  F  Y  L  W  D  F  S  A  Y  A  R  E  V  L  G  L  I  K  K  K  E  H  V  F  L  P  D  F  V  L  N  C  F  A  S  L  C  E  V  *  H  F  F  F  L  C  A  F  V  I  S  G  I  *  E  F  K  *  T  F  F  E  L :   K  T  K  T  K  I  K  T  K  :  N  K  K  K  Y  T  K  T :   R  R  K  G  T  K  E  K  K  S  I  N  K   : *  K  W  I  G  S  E  V  G  P  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0184E04.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8148" stop="8465"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>315</number_coding_nucleotides>
                  <number_encoded_amino_acids>105</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KMAKSYSTMIFLLFALIITVQIATINAAETPEVICKVTINDLMLCLPAVMGKRPPKPTPDCCAVLRKADLQCMCNQKSELGKFGISPEAAMNLPKQCKIKVPDGC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="19858" PGL_stop="27086"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="19858" e_stop="20194"/>
            <exon e_start="21241" e_stop="21534"/>
            <exon e_start="22644" e_stop="22759"/>
            <exon e_start="22947" e_stop="23448"/>
            <exon e_start="23565" e_stop="23603"/>
            <exon e_start="24115" e_stop="24399"/>
            <exon e_start="24907" e_stop="25046"/>
            <exon e_start="25712" e_stop="26189"/>
            <exon e_start="26445" e_stop="27086"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.223" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.737" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="19858" e_stop="20194" e_length="337"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="1.000">
            <gDNA_intron_boundary i_start="20195" i_stop="21240" i_length="1046"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="21241" e_stop="21534" e_length="294"/>
          </exon>
          <intron i_serial="2" don_prob="0.980" acc_prob="0.223">
            <gDNA_intron_boundary i_start="21535" i_stop="22643" i_length="1109"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="22644" e_stop="22759" e_length="116"/>
          </exon>
          <intron i_serial="3" don_prob="0.995" acc_prob="0.737">
            <gDNA_intron_boundary i_start="22760" i_stop="22946" i_length="187"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="22947" e_stop="23448" e_length="502"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.992">
            <gDNA_intron_boundary i_start="23449" i_stop="23564" i_length="116"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="23565" e_stop="23603" e_length="39"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.978">
            <gDNA_intron_boundary i_start="23604" i_stop="24114" i_length="511"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="24115" e_stop="24399" e_length="285"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.981">
            <gDNA_intron_boundary i_start="24400" i_stop="24906" i_length="507"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="24907" e_stop="25046" e_length="140"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.996">
            <gDNA_intron_boundary i_start="25047" i_stop="25711" i_length="665"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="25712" e_stop="26189" e_length="478"/>
          </exon>
          <intron i_serial="8" don_prob="0.994" acc_prob="0.992">
            <gDNA_intron_boundary i_start="26190" i_stop="26444" i_length="255"/>
          </intron>
          <exon e_serial="9" e_score="0.988">
            <gDNA_exon_boundary e_start="26445" e_stop="27086" e_length="642"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19858" stop="20194"/>
              <exon start="21241" stop="21534"/>
              <exon start="22644" stop="22759"/>
              <exon start="22947" stop="23448"/>
              <exon start="23565" stop="23603"/>
              <exon start="24115" stop="24399"/>
              <exon start="24907" stop="25046"/>
              <exon start="25712" stop="26189"/>
              <exon start="26445" stop="27086"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U314735" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAAATATTTGCCAGCCTGAAAATAGCCCACACCCCTCAAAGGCAAGGCACAAACACTCACACACTTTCTCTCTCTATCTATCTGCTCTCAAAGTCTCCTCAACTTGTCAATCATCACACTTTTTCTTCACACAAATCAGCTGAATCTCTCCATATTCTCCTCCACCTCCGTCACTAACGGAAAAAAATTTACGCCGGAAAACGATTCTCCGGCTGAGCTCGCCGGAAATGAGGAAAATGCGTTCTGTTTTATGTCTCCTGGTACTTTGTTGCTCAGTTGCATTTGTTGCTGCTCAAAGATCTAACAATGTAACCTCTAAATGGAAAACACTGAGCG : GAGATGCACCAAAAGTCATAGCTCGTGGAGGATTTTCTGGGTTACTTCCTGATTCAAGCTTTAATGCCTACATGTTGGCACAAGCAATTAGCTCGGCTGATTGGGTTGCTTGGTGTGATGTTCAACTCACAAAAGACGGGGTTGGCATTTGTTTTCCTGATATCAAGCTTAACAATGCTTCTGACATCGATACTCTCTACCCAAACAGGAATAACAACTACTCGGTGAATGGAATTCCTCAGACAGGATGGTTTTCTATAGATTTCAGCATCAAGGATTTGGCACCTGTCAGCT : TGAAACAAGGAGTGTATTCGCGGTCGCCTAGATTTGATGGCACTCCCCAGCAAATTCTTACTGTCCAGGATGTAGCTACCCAAGTCAAACCTCCAGGATTATGGTTGAATATCCAG : CATGATTCCTTCTACAGCCAGCACAATCTGAGTATGAGAAGCTTTGTTGTTTCCCTATCTAGAAGTGTTATTGCCAACTATATTTCATCACCTGAGGTGAATTTCCTGCGAAGTATCGCATCGCGATTGAATCCACGAGTGACAAAGCGCGTTTTCCGGTTTCTCAACGAAGATGATATTGAGCCATCAACAAGTCAAACATATGGTTCTCTAGTGAAGAATCTCACATTTGTTAAAACCTTTGCCGCTGGGATTCTTGTTCCCAAACACTATATCTGGCCAACGGACAGCAGCTTGTACTTGCAGCCACATACATCGGTTGTTTCGGACGCTCATAAGGAAGGACTTGAGATTTATGCAGCCGACTTTGTTAATGATGTACCATTTGCTTATAATTATAGCTATGATCCTGTAGCTGAGTATTTATCCTTTATAGACAACGGTGAGTTCTCGGTGGACGGAGTGTTATCTGACTTCCCAATGTCTCCATCTGCGTCAGTAG : ATTGCTTCTCGCATTTGGGTGCGAATGATAAGCCTCAAG : TAACTCTTCAGATTATCGCACCTCAAGGAGCAAGTGGTGACTATCCTGGTTGTACAGATTTAGCATATACAAAAGCTGCTTCCGATGGTGCAGATATTATTGGCTGTCCTGTCCAAATGACAAAAGATGGAATACCCTTCTGCCTTAGTTCGATAAATCTGATAGACACGACGACTGCGGCCCAATCGCCATTCAGCGACATCGCTACCACTGCTCCAGAGCTTCAGATAACAGATGGAATACTCACCATCAACCTAAACTGGAGCGATATTCAAACGCTGAAAC : CGGTAATATCAACCCGGTATTCAGACTTTAGATTGTCACGGAATCCAAAGGCCAGAAATGTTGGAAAGTTTATGTCGTTAGCAGACTTCTTGACATTTTCCAAAACTGCTAATGTTTCTGGTATAATGATCAGCATAGAG : AATGCTGCATACCTGGCAAAGCAGGGATTAGGTGTAACTGATGCGGTTTTGGATGCCCTAAGCACAGCTGGTTACAATAATCAGACAGCTAGGAAAGTTATGATCCAATCAAATGACAGTTCTGTTCTGGAAGAATTCAAGAAGAGTAGTTATGAACTTGTTTATTTGGTTGACGATAATATCAGTGATATTAAGAACTCAACTATATTGGAGATCAAGACCTTTGCAAAATCTGTTGTCATAACCAAGAAATCAGTCTTCCCCAGTGAAGACGCTTTTATCATTGGTCAAACGAATATTGTGCAGAAGCTGCAGTCAGCAAATCTCCCGGTATATGTACGACTATTTAATAACGAGTTTATATCTCAAGCATGGGACTTCTTCTCAGATTCGTCTACTGAGATAAACAACTATGTTCTTGGAGCTGGTGTTGATGGTCTTGTTACAGAATACCCTGGGACAGCGGCTAGATACCGAA : GGAACCGTTGTTTAGCATACAAAAACTTGCCACCATATATGAGCCCTGTTCAACCTGGGAGTCTCCTGGGACTCATGACTGTTCAGTCTATGCCACCAGTCGAACCTCCCAGCCCCGTGCTCGATGTAAGTGATGTGACTGAGCCACCACTTCCACCTGTTGCAAAGATAAACCCAAGTAACGACGATGGTTCTACAGCTAGAGCTCCCACTACTCCTCCAAATGGCCAATCCTCAGTTGTTGCTAGCATTCTCATGAGCTCAGTTGCAGTTCTTCTAGCAATTTTCATGGTATATTGATGACCATTTCTACTTTGGTGCCACCATTTTGTACAATTTGTTTTGCCATCTTACTGATCAAACCTCCCTCTGGTGATTATGGAGTCGCACATGATGGCGGCGGTAGTCAGCTCATTTAACACATGATTGTTTCCTTGTATTTGCGATGTATCAAAATTTTCAGCTCTTGTTTATTCTTTACATTCTTCCTCGTTTCTATTTTTCATTCCTTCCCTCCCCTTTTTTTTTCCATTTTGGGTCAGATTGAGTGGGTGTCTGGGGTTTATTGCCTATTTATTTGTAAGAATTCTGTTTTGGATATAAGCAATGATCAATTTAGTTAGTATTTTTCATACACAGCCTT</gDNA_template>
            <first_frame> K  N  I  C  Q  P  E  N  S  P  H  P  S  K  A  R  H  K  H  S  H  T  F  S  L  Y  L  S  A  L  K  V  S  S  T  C  Q  S  S  H  F  F  F  T  Q  I  S  *  I  S  P  Y  S  P  P  P  P  S  L  T  E  K  N  L  R  R  K  T  I  L  R  L  S  S  P  E  M  R  K  M  R  S  V  L  C  L  L  V  L  C  C  S  V  A  F  V  A  A  Q  R  S  N  N  V  T  S  K  W  K  T  L  S   : G  D  A  P  K  V  I  A  R  G  G  F  S  G  L  L  P  D  S  S  F  N  A  Y  M  L  A  Q  A  I  S  S  A  D  W  V  A  W  C  D  V  Q  L  T  K  D  G  V  G  I  C  F  P  D  I  K  L  N  N  A  S  D  I  D  T  L  Y  P  N  R  N  N  N  Y  S  V  N  G  I  P  Q  T  G  W  F  S  I  D  F  S  I  K  D  L  A  P  V  S   : L  K  Q  G  V  Y  S  R  S  P  R  F  D  G  T  P  Q  Q  I  L  T  V  Q  D  V  A  T  Q  V  K  P  P  G  L  W  L  N  I  Q  :  H  D  S  F  Y  S  Q  H  N  L  S  M  R  S  F  V  V  S  L  S  R  S  V  I  A  N  Y  I  S  S  P  E  V  N  F  L  R  S  I  A  S  R  L  N  P  R  V  T  K  R  V  F  R  F  L  N  E  D  D  I  E  P  S  T  S  Q  T  Y  G  S  L  V  K  N  L  T  F  V  K  T  F  A  A  G  I  L  V  P  K  H  Y  I  W  P  T  D  S  S  L  Y  L  Q  P  H  T  S  V  V  S  D  A  H  K  E  G  L  E  I  Y  A  A  D  F  V  N  D  V  P  F  A  Y  N  Y  S  Y  D  P  V  A  E  Y  L  S  F  I  D  N  G  E  F  S  V  D  G  V  L  S  D  F  P  M  S  P  S  A  S  V   : D  C  F  S  H  L  G  A  N  D  K  P  Q   : V  T  L  Q  I  I  A  P  Q  G  A  S  G  D  Y  P  G  C  T  D  L  A  Y  T  K  A  A  S  D  G  A  D  I  I  G  C  P  V  Q  M  T  K  D  G  I  P  F  C  L  S  S  I  N  L  I  D  T  T  T  A  A  Q  S  P  F  S  D  I  A  T  T  A  P  E  L  Q  I  T  D  G  I  L  T  I  N  L  N  W  S  D  I  Q  T  L  K   : P  V  I  S  T  R  Y  S  D  F  R  L  S  R  N  P  K  A  R  N  V  G  K  F  M  S  L  A  D  F  L  T  F  S  K  T  A  N  V  S  G  I  M  I  S  I  E  :  N  A  A  Y  L  A  K  Q  G  L  G  V  T  D  A  V  L  D  A  L  S  T  A  G  Y  N  N  Q  T  A  R  K  V  M  I  Q  S  N  D  S  S  V  L  E  E  F  K  K  S  S  Y  E  L  V  Y  L  V  D  D  N  I  S  D  I  K  N  S  T  I  L  E  I  K  T  F  A  K  S  V  V  I  T  K  K  S  V  F  P  S  E  D  A  F  I  I  G  Q  T  N  I  V  Q  K  L  Q  S  A  N  L  P  V  Y  V  R  L  F  N  N  E  F  I  S  Q  A  W  D  F  F  S  D  S  S  T  E  I  N  N  Y  V  L  G  A  G  V  D  G  L  V  T  E  Y  P  G  T  A  A  R  Y  R   : R  N  R  C  L  A  Y  K  N  L  P  P  Y  M  S  P  V  Q  P  G  S  L  L  G  L  M  T  V  Q  S  M  P  P  V  E  P  P  S  P  V  L  D  V  S  D  V  T  E  P  P  L  P  P  V  A  K  I  N  P  S  N  D  D  G  S  T  A  R  A  P  T  T  P  P  N  G  Q  S  S  V  V  A  S  I  L  M  S  S  V  A  V  L  L  A  I  F  M  V  Y  *  *  P  F  L  L  W  C  H  H  F  V  Q  F  V  L  P  S  Y  *  S  N  L  P  L  V  I  M  E  S  H  M  M  A  A  V  V  S  S  F  N  T  *  L  F  P  C  I  C  D  V  S  K  F  S  A  L  V  Y  S  L  H  S  S  S  F  L  F  F  I  P  S  L  P  F  F  F  P  F  W  V  R  L  S  G  C  L  G  F  I  A  Y  L  F  V  R  I  L  F  W  I  *  A  M  I  N  L  V  S  I  F  H  T  Q  P  </first_frame>
            <second_frame>  K  I  F  A  S  L  K  I  A  H  T  P  Q  R  Q  G  T  N  T  H  T  L  S  L  S  I  Y  L  L  S  K  S  P  Q  L  V  N  H  H  T  F  S  S  H  K  S  A  E  S  L  H  I  L  L  H  L  R  H  *  R  K  K  I  Y  A  G  K  R  F  S  G  *  A  R  R  K  *  G  K  C  V  L  F  Y  V  S  W  Y  F  V  A  Q  L  H  L  L  L  L  K  D  L  T  M  *  P  L  N  G  K  H  *  A  :  E  M  H  Q  K  S  *  L  V  E  D  F  L  G  Y  F  L  I  Q  A  L  M  P  T  C  W  H  K  Q  L  A  R  L  I  G  L  L  G  V  M  F  N  S  Q  K  T  G  L  A  F  V  F  L  I  S  S  L  T  M  L  L  T  S  I  L  S  T  Q  T  G  I  T  T  T  R  *  M  E  F  L  R  Q  D  G  F  L  *  I  S  A  S  R  I  W  H  L  S  A  :  *  N  K  E  C  I  R  G  R  L  D  L  M  A  L  P  S  K  F  L  L  S  R  M  *  L  P  K  S  N  L  Q  D  Y  G  *  I  S  S :   M  I  P  S  T  A  S  T  I  *  V  *  E  A  L  L  F  P  Y  L  E  V  L  L  P  T  I  F  H  H  L  R  *  I  S  C  E  V  S  H  R  D  *  I  H  E  *  Q  S  A  F  S  G  F  S  T  K  M  I  L  S  H  Q  Q  V  K  H  M  V  L  *  *  R  I  S  H  L  L  K  P  L  P  L  G  F  L  F  P  N  T  I  S  G  Q  R  T  A  A  C  T  C  S  H  I  H  R  L  F  R  T  L  I  R  K  D  L  R  F  M  Q  P  T  L  L  M  M  Y  H  L  L  I  I  I  A  M  I  L  *  L  S  I  Y  P  L  *  T  T  V  S  S  R  W  T  E  C  Y  L  T  S  Q  C  L  H  L  R  Q  *  :  I  A  S  R  I  W  V  R  M  I  S  L  K  :  *  L  F  R  L  S  H  L  K  E  Q  V  V  T  I  L  V  V  Q  I  *  H  I  Q  K  L  L  P  M  V  Q  I  L  L  A  V  L  S  K  *  Q  K  M  E  Y  P  S  A  L  V  R  *  I  *  *  T  R  R  L  R  P  N  R  H  S  A  T  S  L  P  L  L  Q  S  F  R  *  Q  M  E  Y  S  P  S  T  *  T  G  A  I  F  K  R  *  N  :  R  *  Y  Q  P  G  I  Q  T  L  D  C  H  G  I  Q  R  P  E  M  L  E  S  L  C  R  *  Q  T  S  *  H  F  P  K  L  L  M  F  L  V  *  *  S  A  *  R :   M  L  H  T  W  Q  S  R  D  *  V  *  L  M  R  F  W  M  P  *  A  Q  L  V  T  I  I  R  Q  L  G  K  L  *  S  N  Q  M  T  V  L  F  W  K  N  S  R  R  V  V  M  N  L  F  I  W  L  T  I  I  S  V  I  L  R  T  Q  L  Y  W  R  S  R  P  L  Q  N  L  L  S  *  P  R  N  Q  S  S  P  V  K  T  L  L  S  L  V  K  R  I  L  C  R  S  C  S  Q  Q  I  S  R  Y  M  Y  D  Y  L  I  T  S  L  Y  L  K  H  G  T  S  S  Q  I  R  L  L  R  *  T  T  M  F  L  E  L  V  L  M  V  L  L  Q  N  T  L  G  Q  R  L  D  T  E  :  G  T  V  V  *  H  T  K  T  C  H  H  I  *  A  L  F  N  L  G  V  S  W  D  S  *  L  F  S  L  C  H  Q  S  N  L  P  A  P  C  S  M  *  V  M  *  L  S  H  H  F  H  L  L  Q  R  *  T  Q  V  T  T  M  V  L  Q  L  E  L  P  L  L  L  Q  M  A  N  P  Q  L  L  L  A  F  S  *  A  Q  L  Q  F  F  *  Q  F  S  W  Y  I  D  D  H  F  Y  F  G  A  T  I  L  Y  N  L  F  C  H  L  T  D  Q  T  S  L  W  *  L  W  S  R  T  *  W  R  R  *  S  A  H  L  T  H  D  C  F  L  V  F  A  M  Y  Q  N  F  Q  L  L  F  I  L  Y  I  L  P  R  F  Y  F  S  F  L  P  S  P  F  F  F  H  F  G  S  D  *  V  G  V  W  G  L  L  P  I  Y  L  *  E  F  C  F  G  Y  K  Q  *  S  I  *  L  V  F  F  I  H  S  L </second_frame>
            <third_frame>   K  Y  L  P  A  *  K  *  P  T  P  L  K  G  K  A  Q  T  L  T  H  F  L  S  L  S  I  C  S  Q  S  L  L  N  L  S  I  I  T  L  F  L  H  T  N  Q  L  N  L  S  I  F  S  S  T  S  V  T  N  G  K  K  F  T  P  E  N  D  S  P  A  E  L  A  G  N  E  E  N  A  F  C  F  M  S  P  G  T  L  L  L  S  C  I  C  C  C  S  K  I  *  Q  C  N  L  *  M  E  N  T  E  R :   R  C  T  K  S  H  S  S  W  R  I  F  W  V  T  S  *  F  K  L  *  C  L  H  V  G  T  S  N  *  L  G  *  L  G  C  L  V  *  C  S  T  H  K  R  R  G  W  H  L  F  S  *  Y  Q  A  *  Q  C  F  *  H  R  Y  S  L  P  K  Q  E  *  Q  L  L  G  E  W  N  S  S  D  R  M  V  F  Y  R  F  Q  H  Q  G  F  G  T  C  Q  L :   E  T  R  S  V  F  A  V  A  *  I  *  W  H  S  P  A  N  S  Y  C  P  G  C  S  Y  P  S  Q  T  S  R  I  M  V  E  Y  P   : A  *  F  L  L  Q  P  A  Q  S  E  Y  E  K  L  C  C  F  P  I  *  K  C  Y  C  Q  L  Y  F  I  T  *  G  E  F  P  A  K  Y  R  I  A  I  E  S  T  S  D  K  A  R  F  P  V  S  Q  R  R  *  Y  *  A  I  N  K  S  N  I  W  F  S  S  E  E  S  H  I  C  *  N  L  C  R  W  D  S  C  S  Q  T  L  Y  L  A  N  G  Q  Q  L  V  L  A  A  T  Y  I  G  C  F  G  R  S  *  G  R  T  *  D  L  C  S  R  L  C  *  *  C  T  I  C  L  *  L  *  L  *  S  C  S  *  V  F  I  L  Y  R  Q  R  *  V  L  G  G  R  S  V  I  *  L  P  N  V  S  I  C  V  S  R :   L  L  L  A  F  G  C  E  *  *  A  S  S :   N  S  S  D  Y  R  T  S  R  S  K  W  *  L  S  W  L  Y  R  F  S  I  Y  K  S  C  F  R  W  C  R  Y  Y  W  L  S  C  P  N  D  K  R  W  N  T  L  L  P  *  F  D  K  S  D  R  H  D  D  C  G  P  I  A  I  Q  R  H  R  Y  H  C  S  R  A  S  D  N  R  W  N  T  H  H  Q  P  K  L  E  R  Y  S  N  A  E  T :   G  N  I  N  P  V  F  R  L  *  I  V  T  E  S  K  G  Q  K  C  W  K  V  Y  V  V  S  R  L  L  D  I  F  Q  N  C  *  C  F  W  Y  N  D  Q  H  R   : E  C  C  I  P  G  K  A  G  I  R  C  N  *  C  G  F  G  C  P  K  H  S  W  L  Q  *  S  D  S  *  E  S  Y  D  P  I  K  *  Q  F  C  S  G  R  I  Q  E  E  *  L  *  T  C  L  F  G  *  R  *  Y  Q  *  Y  *  E  L  N  Y  I  G  D  Q  D  L  C  K  I  C  C  H  N  Q  E  I  S  L  P  Q  *  R  R  F  Y  H  W  S  N  E  Y  C  A  E  A  A  V  S  K  S  P  G  I  C  T  T  I  *  *  R  V  Y  I  S  S  M  G  L  L  L  R  F  V  Y  *  D  K  Q  L  C  S  W  S  W  C  *  W  S  C  Y  R  I  P  W  D  S  G  *  I  P  K :   E  P  L  F  S  I  Q  K  L  A  T  I  Y  E  P  C  S  T  W  E  S  P  G  T  H  D  C  S  V  Y  A  T  S  R  T  S  Q  P  R  A  R  C  K  *  C  D  *  A  T  T  S  T  C  C  K  D  K  P  K  *  R  R  W  F  Y  S  *  S  S  H  Y  S  S  K  W  P  I  L  S  C  C  *  H  S  H  E  L  S  C  S  S  S  S  N  F  H  G  I  L  M  T  I  S  T  L  V  P  P  F  C  T  I  C  F  A  I  L  L  I  K  P  P  S  G  D  Y  G  V  A  H  D  G  G  G  S  Q  L  I  *  H  M  I  V  S  L  Y  L  R  C  I  K  I  F  S  S  C  L  F  F  T  F  F  L  V  S  I  F  H  S  F  P  P  L  F  F  S  I  L  G  Q  I  E  W  V  S  G  V  Y  C  L  F  I  C  K  N  S  V  L  D  I  S  N  D  Q  F  S  *  Y  F  S  Y  T  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0184E04.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20002" stop="20194"/>
                    <exon start="21241" stop="21534"/>
                    <exon start="22644" stop="22759"/>
                    <exon start="22947" stop="23448"/>
                    <exon start="23565" stop="23603"/>
                    <exon start="24115" stop="24399"/>
                    <exon start="24907" stop="25046"/>
                    <exon start="25712" stop="26189"/>
                    <exon start="26445" stop="26743"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>2343</number_coding_nucleotides>
                  <number_encoded_amino_acids>781</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ISPYSPPPPSLTEKNLRRKTILRLSSPEMRKMRSVLCLLVLCCSVAFVAAQRSNNVTSKWKTLSGDAPKVIARGGFSGLLPDSSFNAYMLAQAISSADWVAWCDVQLTKDGVGICFPDIKLNNASDIDTLYPNRNNNYSVNGIPQTGWFSIDFSIKDLAPVSLKQGVYSRSPRFDGTPQQILTVQDVATQVKPPGLWLNIQHDSFYSQHNLSMRSFVVSLSRSVIANYISSPEVNFLRSIASRLNPRVTKRVFRFLNEDDIEPSTSQTYGSLVKNLTFVKTFAAGILVPKHYIWPTDSSLYLQPHTSVVSDAHKEGLEIYAADFVNDVPFAYNYSYDPVAEYLSFIDNGEFSVDGVLSDFPMSPSASVDCFSHLGANDKPQVTLQIIAPQGASGDYPGCTDLAYTKAASDGADIIGCPVQMTKDGIPFCLSSINLIDTTTAAQSPFSDIATTAPELQITDGILTINLNWSDIQTLKPVISTRYSDFRLSRNPKARNVGKFMSLADFLTFSKTANVSGIMISIENAAYLAKQGLGVTDAVLDALSTAGYNNQTARKVMIQSNDSSVLEEFKKSSYELVYLVDDNISDIKNSTILEIKTFAKSVVITKKSVFPSEDAFIIGQTNIVQKLQSANLPVYVRLFNNEFISQAWDFFSDSSTEINNYVLGAGVDGLVTEYPGTAARYRRNRCLAYKNLPPYMSPVQPGSLLGLMTVQSMPPVEPPSPVLDVSDVTEPPLPPVAKINPSNDDGSTARAPTTPPNGQSSVVASILMSSVAVLLAIFMVY*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0184E04.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26863" stop="27066"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HMIVSLYLRCIKIFSSCLFFTFFLVSIFHSFPPLFFSILGQIEWVSGVYCLFICKNSVLDISNDQFS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="29380" PGL_stop="29136"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="29380" e_stop="29136"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.959"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.959">
            <gDNA_exon_boundary e_start="29380" e_stop="29136" e_length="245"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29380" stop="29136"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U338098" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CACCTCAGAGACAGAAATGAGCAAAAGTGAAGAATGCAATTGTTGCTGCCTGCTGCAACTGATTTCTTTTGGTCGGTACTCCGAGCATTCTGTGTATGCTGTTTTTGGTACTGAAGTGAGATTTATGCCACATTGACCAATGTCAGAGTTGTACAGGGGCACAAAACGGCAACACATTTTTTCATAATACAGAGATGTAATATTGACTTTTTGATATATACCAAAAACCGTGCAAAAGATTATTG</gDNA_template>
            <first_frame> H  L  R  D  R  N  E  Q  K  *  R  M  Q  L  L  L  P  A  A  T  D  F  F  W  S  V  L  R  A  F  C  V  C  C  F  W  Y  *  S  E  I  Y  A  T  L  T  N  V  R  V  V  Q  G  H  K  T  A  T  H  F  F  I  I  Q  R  C  N  I  D  F  L  I  Y  T  K  N  R  A  K  D  Y   </first_frame>
            <second_frame>  T  S  E  T  E  M  S  K  S  E  E  C  N  C  C  C  L  L  Q  L  I  S  F  G  R  Y  S  E  H  S  V  Y  A  V  F  G  T  E  V  R  F  M  P  H  *  P  M  S  E  L  Y  R  G  T  K  R  Q  H  I  F  S  *  Y  R  D  V  I  L  T  F  *  Y  I  P  K  T  V  Q  K  I  I  </second_frame>
            <third_frame>   P  Q  R  Q  K  *  A  K  V  K  N  A  I  V  A  A  C  C  N  *  F  L  L  V  G  T  P  S  I  L  C  M  L  F  L  V  L  K  *  D  L  C  H  I  D  Q  C  Q  S  C  T  G  A  Q  N  G  N  T  F  F  H  N  T  E  M  *  Y  *  L  F  D  I  Y  Q  K  P  C  K  R  L  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0184E04.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="39303" PGL_stop="35596"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="39303" e_stop="38580"/>
            <exon e_start="37474" e_stop="37325"/>
            <exon e_start="36788" e_stop="35596"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.935" acc_prob="0.990" e_score="0.999"/>
          <exon-intron don_prob="0.984" acc_prob="0.909" e_score="1.000"/>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="39303" e_stop="38580" e_length="724"/>
          </exon>
          <intron i_serial="1" don_prob="0.935" acc_prob="0.990">
            <gDNA_intron_boundary i_start="38579" i_stop="37475" i_length="1105"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="37474" e_stop="37325" e_length="150"/>
          </exon>
          <intron i_serial="2" don_prob="0.984" acc_prob="0.909">
            <gDNA_intron_boundary i_start="37324" i_stop="36789" i_length="536"/>
          </intron>
          <exon e_serial="3" e_score="0.999">
            <gDNA_exon_boundary e_start="36788" e_stop="35596" e_length="1193"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39303" stop="38580"/>
              <exon start="37474" stop="37325"/>
              <exon start="36788" stop="35596"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U333418" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGAGAGAGAGGGGAAGAAGAAGATGAACAAGAAGAAGCTGAAAATTCTTCTTTCTCTCTTTGCTCTCAACACAATTACTCTTTATCTCTACTTCTCTTCACACCCAGATCATTTCCGCCACAATTTCCCTAAAAACCACTATATTACTACCGGAAACCGCTTTTCTTCATCGGAAAACCATCCAAATTTGCACTCCTCCGTTGCTTCCCAATCCAAACCATGGCCTATTTTGCCGTCTTACCTCCCTTGGTCTCAGAACCCCAACGTTGGTTGGAGATCGTGTGAGGGTTATTTTGGAAATGGGTTTACTCGTAAAATCGATCTTCTCAAAGCCTCGCCGGAGATTCACCGGAAATTCGGTGAAAACAGATATTTCGGTGAAGGAGGAGTAGGAGGGTGGTTTAGGTGTTTTTTCAGTGAGACATTGCAGAGTTCGATTTGTGAAGGAGGGGTAATAAGAATGAATCCGGAGAAAATTTTGATGTCTAAAGGAGGAGAGAAATTGGAAGAAGTAATAGGAAGGGGAGAAGAAGAAGAGTTACCCATTTTTGAAAATGGAGCTTTTGAGATAGAGGTTAATGAAAGAACAAAAATTGGGAAAAAATTAGCTGATGAAAATTTCTTGAATAAATATTTACCTGAAGGTGCAGTCTCAAAGCACACTATGAGGGAATTAATCGACTCGATTCGATTAGTTGACGCCAATGATTTTCATTGTTCTGAG : TGGATTGAGGAGCCATCACTTTTGATTACCCGATTTGAGTATGCAAATCTTTTTCATACAATTACTGATTGGTATAGTGCATACGCGGCATCCAGAGTTACTGGCTTACCCAGTCGGCCACATTTGGTTTTTGTAGATGGCCATTGTGAG : ACACAATTGGAGGAAACATGGAGAGCACTGTTTTCAAGCCTCACTTATGCTAAAAACTTTAGCGGTCCGGTTTGTTTTCGCCATGCTATCCTCTCGCCGTTGGGATATGAAACTGCCCTGTTTAAGGGGCTTTCAGAAAGTATCGGTTGTACTGGAGCTCCTGCCCATGATTTGTGGCAAAATCCCAGTGATAGTAAAACTGCACGGTTGTCCGAGTTTGGAGAGATGATCAGAGCAGCCTTTGGATTTCCTGTGGATAGACAGAACATCCCAAGGACAGTCACTGGCCACAATGTCCTCTTTGTTAGACGCGAGGATTATTTAGCTCACCCACGTCATGGCGGAAAGGTACAGTCTAGGCTTAGCAATGAACAAGAAGTATTTGATTCCATAAAGAGCTGGTCCTTGAACCACACAGAGTGCAAAGTAAATGTGATTAACGGATTATTTGCCCACATGTCCATGAAAGATCAAGTTCGAGCAATCCAAGATGCTTCTGTCATTGTAGGTGCTCATGGAGCAGGTCTAACGCACATTGTTTCTGCATCACCAAAAGCTGTTATACTAGAAATCATAAGCAGTGAATATAGGCGCCCCCATTTTTCTCTGATTGCTTATTGGAAAGGATTGGAGTACCATCCCATTGATTTGGAGGGATCTTATGCGGATCCACCAGTCGTAATTGACAAGCTCAACAGTATTTTGAGGAGTCTTGGCTGCTAAATCTACTCAACAGTTTGAACAGTTCAACTTTTCTCTACAAGACTGGAATTTGGAGCCTGAAAATCTTGTAAAATATGTTTCATCTGCAGTTCTATAGTTTTGCTGCATTCTTGATCCTCAATCCGGTGTTCACAAGCTTCACAGGTTCTGGCAGTTACTAATTTATTAGCCCCTCTCAGTTATGAACTCTCAGAACGATCGTTATGGTGAGCTCATTCAAGATATTCTTTATGGTGCAATATTACAAGTCACTCGCGATACACACATTTGTAAATCACATTATAGGTGTGTACAACTTCATTACAATTCGTTGTCAATTGTTTTCTGCAATTTATTATCTTCTTGTTCTGGGAAGACACAGATTAACAAGCATGTTGAAGTAGCAGATTAACAAGAACCTCAGTGTACTGTTCAGTGATGTATGATTGTAACTTGTAACAAAACAAAAGAAATGAGACATTTAACAAGAA</gDNA_template>
            <first_frame> *  E  R  G  E  E  E  D  E  Q  E  E  A  E  N  S  S  F  S  L  C  S  Q  H  N  Y  S  L  S  L  L  L  F  T  P  R  S  F  P  P  Q  F  P  *  K  P  L  Y  Y  Y  R  K  P  L  F  F  I  G  K  P  S  K  F  A  L  L  R  C  F  P  I  Q  T  M  A  Y  F  A  V  L  P  P  L  V  S  E  P  Q  R  W  L  E  I  V  *  G  L  F  W  K  W  V  Y  S  *  N  R  S  S  Q  S  L  A  G  D  S  P  E  I  R  *  K  Q  I  F  R  *  R  R  S  R  R  V  V  *  V  F  F  Q  *  D  I  A  E  F  D  L  *  R  R  G  N  K  N  E  S  G  E  N  F  D  V  *  R  R  R  E  I  G  R  S  N  R  K  G  R  R  R  R  V  T  H  F  *  K  W  S  F  *  D  R  G  *  *  K  N  K  N  W  E  K  I  S  *  *  K  F  L  E  *  I  F  T  *  R  C  S  L  K  A  H  Y  E  G  I  N  R  L  D  S  I  S  *  R  Q  *  F  S  L  F  *   : V  D  *  G  A  I  T  F  D  Y  P  I  *  V  C  K  S  F  S  Y  N  Y  *  L  V  *  C  I  R  G  I  Q  S  Y  W  L  T  Q  S  A  T  F  G  F  C  R  W  P  L  *   : D  T  I  G  G  N  M  E  S  T  V  F  K  P  H  L  C  *  K  L  *  R  S  G  L  F  S  P  C  Y  P  L  A  V  G  I  *  N  C  P  V  *  G  A  F  R  K  Y  R  L  Y  W  S  S  C  P  *  F  V  A  K  S  Q  *  *  *  N  C  T  V  V  R  V  W  R  D  D  Q  S  S  L  W  I  S  C  G  *  T  E  H  P  K  D  S  H  W  P  Q  C  P  L  C  *  T  R  G  L  F  S  S  P  T  S  W  R  K  G  T  V  *  A  *  Q  *  T  R  S  I  *  F  H  K  E  L  V  L  E  P  H  R  V  Q  S  K  C  D  *  R  I  I  C  P  H  V  H  E  R  S  S  S  S  N  P  R  C  F  C  H  C  R  C  S  W  S  R  S  N  A  H  C  F  C  I  T  K  S  C  Y  T  R  N  H  K  Q  *  I  *  A  P  P  F  F  S  D  C  L  L  E  R  I  G  V  P  S  H  *  F  G  G  I  L  C  G  S  T  S  R  N  *  Q  A  Q  Q  Y  F  E  E  S  W  L  L  N  L  L  N  S  L  N  S  S  T  F  L  Y  K  T  G  I  W  S  L  K  I  L  *  N  M  F  H  L  Q  F  Y  S  F  A  A  F  L  I  L  N  P  V  F  T  S  F  T  G  S  G  S  Y  *  F  I  S  P  S  Q  L  *  T  L  R  T  I  V  M  V  S  S  F  K  I  F  F  M  V  Q  Y  Y  K  S  L  A  I  H  T  F  V  N  H  I  I  G  V  Y  N  F  I  T  I  R  C  Q  L  F  S  A  I  Y  Y  L  L  V  L  G  R  H  R  L  T  S  M  L  K  *  Q  I  N  K  N  L  S  V  L  F  S  D  V  *  L  *  L  V  T  K  Q  K  K  *  D  I  *  Q  E </first_frame>
            <second_frame>  E  R  E  G  K  K  K  M  N  K  K  K  L  K  I  L  L  S  L  F  A  L  N  T  I  T  L  Y  L  Y  F  S  S  H  P  D  H  F  R  H  N  F  P  K  N  H  Y  I  T  T  G  N  R  F  S  S  S  E  N  H  P  N  L  H  S  S  V  A  S  Q  S  K  P  W  P  I  L  P  S  Y  L  P  W  S  Q  N  P  N  V  G  W  R  S  C  E  G  Y  F  G  N  G  F  T  R  K  I  D  L  L  K  A  S  P  E  I  H  R  K  F  G  E  N  R  Y  F  G  E  G  G  V  G  G  W  F  R  C  F  F  S  E  T  L  Q  S  S  I  C  E  G  G  V  I  R  M  N  P  E  K  I  L  M  S  K  G  G  E  K  L  E  E  V  I  G  R  G  E  E  E  E  L  P  I  F  E  N  G  A  F  E  I  E  V  N  E  R  T  K  I  G  K  K  L  A  D  E  N  F  L  N  K  Y  L  P  E  G  A  V  S  K  H  T  M  R  E  L  I  D  S  I  R  L  V  D  A  N  D  F  H  C  S  E  :  W  I  E  E  P  S  L  L  I  T  R  F  E  Y  A  N  L  F  H  T  I  T  D  W  Y  S  A  Y  A  A  S  R  V  T  G  L  P  S  R  P  H  L  V  F  V  D  G  H  C  E  :  T  Q  L  E  E  T  W  R  A  L  F  S  S  L  T  Y  A  K  N  F  S  G  P  V  C  F  R  H  A  I  L  S  P  L  G  Y  E  T  A  L  F  K  G  L  S  E  S  I  G  C  T  G  A  P  A  H  D  L  W  Q  N  P  S  D  S  K  T  A  R  L  S  E  F  G  E  M  I  R  A  A  F  G  F  P  V  D  R  Q  N  I  P  R  T  V  T  G  H  N  V  L  F  V  R  R  E  D  Y  L  A  H  P  R  H  G  G  K  V  Q  S  R  L  S  N  E  Q  E  V  F  D  S  I  K  S  W  S  L  N  H  T  E  C  K  V  N  V  I  N  G  L  F  A  H  M  S  M  K  D  Q  V  R  A  I  Q  D  A  S  V  I  V  G  A  H  G  A  G  L  T  H  I  V  S  A  S  P  K  A  V  I  L  E  I  I  S  S  E  Y  R  R  P  H  F  S  L  I  A  Y  W  K  G  L  E  Y  H  P  I  D  L  E  G  S  Y  A  D  P  P  V  V  I  D  K  L  N  S  I  L  R  S  L  G  C  *  I  Y  S  T  V  *  T  V  Q  L  F  S  T  R  L  E  F  G  A  *  K  S  C  K  I  C  F  I  C  S  S  I  V  L  L  H  S  *  S  S  I  R  C  S  Q  A  S  Q  V  L  A  V  T  N  L  L  A  P  L  S  Y  E  L  S  E  R  S  L  W  *  A  H  S  R  Y  S  L  W  C  N  I  T  S  H  S  R  Y  T  H  L  *  I  T  L  *  V  C  T  T  S  L  Q  F  V  V  N  C  F  L  Q  F  I  I  F  L  F  W  E  D  T  D  *  Q  A  C  *  S  S  R  L  T  R  T  S  V  Y  C  S  V  M  Y  D  C  N  L  *  Q  N  K  R  N  E  T  F  N  K   </second_frame>
            <third_frame>   R  E  R  G  R  R  R  *  T  R  R  S  *  K  F  F  F  L  S  L  L  S  T  Q  L  L  F  I  S  T  S  L  H  T  Q  I  I  S  A  T  I  S  L  K  T  T  I  L  L  P  E  T  A  F  L  H  R  K  T  I  Q  I  C  T  P  P  L  L  P  N  P  N  H  G  L  F  C  R  L  T  S  L  G  L  R  T  P  T  L  V  G  D  R  V  R  V  I  L  E  M  G  L  L  V  K  S  I  F  S  K  P  R  R  R  F  T  G  N  S  V  K  T  D  I  S  V  K  E  E  *  E  G  G  L  G  V  F  S  V  R  H  C  R  V  R  F  V  K  E  G  *  *  E  *  I  R  R  K  F  *  C  L  K  E  E  R  N  W  K  K  *  *  E  G  E  K  K  K  S  Y  P  F  L  K  M  E  L  L  R  *  R  L  M  K  E  Q  K  L  G  K  N  *  L  M  K  I  S  *  I  N  I  Y  L  K  V  Q  S  Q  S  T  L  *  G  N  *  S  T  R  F  D  *  L  T  P  M  I  F  I  V  L  S :   G  L  R  S  H  H  F  *  L  P  D  L  S  M  Q  I  F  F  I  Q  L  L  I  G  I  V  H  T  R  H  P  E  L  L  A  Y  P  V  G  H  I  W  F  L  *  M  A  I  V  R :   H  N  W  R  K  H  G  E  H  C  F  Q  A  S  L  M  L  K  T  L  A  V  R  F  V  F  A  M  L  S  S  R  R  W  D  M  K  L  P  C  L  R  G  F  Q  K  V  S  V  V  L  E  L  L  P  M  I  C  G  K  I  P  V  I  V  K  L  H  G  C  P  S  L  E  R  *  S  E  Q  P  L  D  F  L  W  I  D  R  T  S  Q  G  Q  S  L  A  T  M  S  S  L  L  D  A  R  I  I  *  L  T  H  V  M  A  E  R  Y  S  L  G  L  A  M  N  K  K  Y  L  I  P  *  R  A  G  P  *  T  T  Q  S  A  K  *  M  *  L  T  D  Y  L  P  T  C  P  *  K  I  K  F  E  Q  S  K  M  L  L  S  L  *  V  L  M  E  Q  V  *  R  T  L  F  L  H  H  Q  K  L  L  Y  *  K  S  *  A  V  N  I  G  A  P  I  F  L  *  L  L  I  G  K  D  W  S  T  I  P  L  I  W  R  D  L  M  R  I  H  Q  S  *  L  T  S  S  T  V  F  *  G  V  L  A  A  K  S  T  Q  Q  F  E  Q  F  N  F  S  L  Q  D  W  N  L  E  P  E  N  L  V  K  Y  V  S  S  A  V  L  *  F  C  C  I  L  D  P  Q  S  G  V  H  K  L  H  R  F  W  Q  L  L  I  Y  *  P  L  S  V  M  N  S  Q  N  D  R  Y  G  E  L  I  Q  D  I  L  Y  G  A  I  L  Q  V  T  R  D  T  H  I  C  K  S  H  Y  R  C  V  Q  L  H  Y  N  S  L  S  I  V  F  C  N  L  L  S  S  C  S  G  K  T  Q  I  N  K  H  V  E  V  A  D  *  Q  E  P  Q  C  T  V  Q  *  C  M  I  V  T  C  N  K  T  K  E  M  R  H  L  T  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0184E04.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="39302" stop="38580"/>
                    <exon start="37474" stop="37325"/>
                    <exon start="36788" stop="36066"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1593</number_coding_nucleotides>
                  <number_encoded_amino_acids>531</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EREGKKKMNKKKLKILLSLFALNTITLYLYFSSHPDHFRHNFPKNHYITTGNRFSSSENHPNLHSSVASQSKPWPILPSYLPWSQNPNVGWRSCEGYFGNGFTRKIDLLKASPEIHRKFGENRYFGEGGVGGWFRCFFSETLQSSICEGGVIRMNPEKILMSKGGEKLEEVIGRGEEEELPIFENGAFEIEVNERTKIGKKLADENFLNKYLPEGAVSKHTMRELIDSIRLVDANDFHCSEWIEEPSLLITRFEYANLFHTITDWYSAYAASRVTGLPSRPHLVFVDGHCETQLEETWRALFSSLTYAKNFSGPVCFRHAILSPLGYETALFKGLSESIGCTGAPAHDLWQNPSDSKTARLSEFGEMIRAAFGFPVDRQNIPRTVTGHNVLFVRREDYLAHPRHGGKVQSRLSNEQEVFDSIKSWSLNHTECKVNVINGLFAHMSMKDQVRAIQDASVIVGAHGAGLTHIVSASPKAVILEIISSEYRRPHFSLIAYWKGLEYHPIDLEGSYADPPVVIDKLNSILRSLGC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0184E04.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="35896" stop="35675"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PLSVMNSQNDRYGELIQDILYGAILQVTRDTHICKSHYRCVQLHYNSLSIVFCNLLSSCSGKTQINKHVEVAD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="47481" PGL_stop="46856"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="47481" e_stop="46856"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="47481" e_stop="46856" e_length="626"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47481" stop="46856"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U331930" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTGAAACTGTCACCTACATGTTGCAGGTAATTTATTTTCAATTTTACACTTTTTATAAAAATAAAATCAGAAAAAAAAGAAGCAAATTAAGATATTAGACCTAATCCATCGAAGCCTCTATTGGATAGACTGAACGAACTGTCCAATGGTAATGAATAAGGAACCATTTGCGGAGATTGATTCAAGGGATTAACTTTATTTGACCTTATTAAAGCTGAAAAGAAATTTCATTTAAACCCTTTAATTAAACGGTATTTATTTTAGATACTTTATATCGGCTTGTGTCTCTTTTCATATGATGTTGGTGCAAATTAGTTTCCACGTTTCATAAAATTAAAGGAGTAGTTGAATAAATGTGATTGTTCAACTTAAAAGGATCAAAATAAATATGTTTAACTTATAAATGACTTAGATTAATTTATGTTTGAACAGTCAGCACATAAATGTCCATTTTGTTTTTGTATCCTAAATTTCATGATGTTGAAAATTATTTAGGTAAACAACATTTATATGTTAAAATTTCATATTAATTGAAATTAAAGCAAGTTTTTTTTTATTTTTATATTTAATATTATTATTTGTACAAAAGGGAGGCTCAGAGGCGAAACCATCTTATACTAGGAGT</gDNA_template>
            <first_frame> F  E  T  V  T  Y  M  L  Q  V  I  Y  F  Q  F  Y  T  F  Y  K  N  K  I  R  K  K  R  S  K  L  R  Y  *  T  *  S  I  E  A  S  I  G  *  T  E  R  T  V  Q  W  *  *  I  R  N  H  L  R  R  L  I  Q  G  I  N  F  I  *  P  Y  *  S  *  K  E  I  S  F  K  P  F  N  *  T  V  F  I  L  D  T  L  Y  R  L  V  S  L  F  I  *  C  W  C  K  L  V  S  T  F  H  K  I  K  G  V  V  E  *  M  *  L  F  N  L  K  G  S  K  *  I  C  L  T  Y  K  *  L  R  L  I  Y  V  *  T  V  S  T  *  M  S  I  L  F  L  Y  P  K  F  H  D  V  E  N  Y  L  G  K  Q  H  L  Y  V  K  I  S  Y  *  L  K  L  K  Q  V  F  F  Y  F  Y  I  *  Y  Y  Y  L  Y  K  R  E  A  Q  R  R  N  H  L  I  L  G   </first_frame>
            <second_frame>  L  K  L  S  P  T  C  C  R  *  F  I  F  N  F  T  L  F  I  K  I  K  S  E  K  K  E  A  N  *  D  I  R  P  N  P  S  K  P  L  L  D  R  L  N  E  L  S  N  G  N  E  *  G  T  I  C  G  D  *  F  K  G  L  T  L  F  D  L  I  K  A  E  K  K  F  H  L  N  P  L  I  K  R  Y  L  F  *  I  L  Y  I  G  L  C  L  F  S  Y  D  V  G  A  N  *  F  P  R  F  I  K  L  K  E  *  L  N  K  C  D  C  S  T  *  K  D  Q  N  K  Y  V  *  L  I  N  D  L  D  *  F  M  F  E  Q  S  A  H  K  C  P  F  C  F  C  I  L  N  F  M  M  L  K  I  I  *  V  N  N  I  Y  M  L  K  F  H  I  N  *  N  *  S  K  F  F  F  I  F  I  F  N  I  I  I  C  T  K  G  R  L  R  G  E  T  I  L  Y  *  E  </second_frame>
            <third_frame>   *  N  C  H  L  H  V  A  G  N  L  F  S  I  L  H  F  L  *  K  *  N  Q  K  K  K  K  Q  I  K  I  L  D  L  I  H  R  S  L  Y  W  I  D  *  T  N  C  P  M  V  M  N  K  E  P  F  A  E  I  D  S  R  D  *  L  Y  L  T  L  L  K  L  K  R  N  F  I  *  T  L  *  L  N  G  I  Y  F  R  Y  F  I  S  A  C  V  S  F  H  M  M  L  V  Q  I  S  F  H  V  S  *  N  *  R  S  S  *  I  N  V  I  V  Q  L  K  R  I  K  I  N  M  F  N  L  *  M  T  *  I  N  L  C  L  N  S  Q  H  I  N  V  H  F  V  F  V  S  *  I  S  *  C  *  K  L  F  R  *  T  T  F  I  C  *  N  F  I  L  I  E  I  K  A  S  F  F  L  F  L  Y  L  I  L  L  F  V  Q  K  G  G  S  E  A  K  P  S  Y  T  R  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0184E04.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="52383" PGL_stop="50112"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="52383" e_stop="52334"/>
            <exon e_start="52217" e_stop="52145"/>
            <exon e_start="51219" e_stop="50883"/>
            <exon e_start="50651" e_stop="50485"/>
            <exon e_start="50390" e_stop="50112"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.959" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="0.997"/>
          <exon-intron don_prob="0.996" acc_prob="0.836" e_score="0.994"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="52383" e_stop="52334" e_length="50"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.997">
            <gDNA_intron_boundary i_start="52333" i_stop="52218" i_length="116"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="52217" e_stop="52145" e_length="73"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.959">
            <gDNA_intron_boundary i_start="52144" i_stop="51220" i_length="925"/>
          </intron>
          <exon e_serial="3" e_score="0.997">
            <gDNA_exon_boundary e_start="51219" e_stop="50883" e_length="337"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="50882" i_stop="50652" i_length="231"/>
          </intron>
          <exon e_serial="4" e_score="0.994">
            <gDNA_exon_boundary e_start="50651" e_stop="50485" e_length="167"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.836">
            <gDNA_intron_boundary i_start="50484" i_stop="50391" i_length="94"/>
          </intron>
          <exon e_serial="5" e_score="0.989">
            <gDNA_exon_boundary e_start="50390" e_stop="50112" e_length="279"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52383" stop="52334"/>
              <exon start="52217" stop="52145"/>
              <exon start="51219" stop="50883"/>
              <exon start="50651" stop="50485"/>
              <exon start="50390" stop="50112"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U314526" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTCTTTGAGAAAATCGAAACCCTAAGGACCTCCGTCACCGGCGACAATGG : GTATCTCTCGTGATTCTATGCACAAGAGACGTGCCACTGGAGGAAAGCAGAAGACTTGGAGGAAGAAGAGAAA : GTATGAGCTTGGCAGACAGCCCGCAAACACAAAGCTGGTGCCAAATGCTAAGACTGTTAGAAGGATAAGAGTCCGAGGAGGTAATGTGAAGTGGCGTGCTTTGAGGTTGGATACTGGGAATTTCTCTTGGGGTAGCGAGGCTGTTACAAGGAAGACTCGTCTGTTGGATGTGGTGTATAACGCCTCTAACAATGAGTTGGTTAGGACACAAACCCTGGTGAAGAGTGCAATTATTCAGGTTGACGCAGCTCCATTTAAGCAGTGGTATCTCCAGCACTATGGAGTTGAAATCGGTCGCAAGAAGAAGACTGCTGCTTCTTCCAAAAAGGAAGGAGAG : GAGGCTGAGGCTGTAGCAGAGGAGAAAAAGAGTAACCATGTCCAAAGAAAGCTGGAAAAGAGGCAACAGGATCGCAAGATTGACCCACATGTCGAGGAGCAATTTGCTAGTGGGCGTCTATTGGCTGCAATCTCATCGCGACCTGGCCAGTGTGGTCGTGCTGATGG : TTACATATTGGAAGGAAAGGAACTTGAATTTTACATGAAGAAACTTCAGAAGAAGAAAGGGAAGGGTGCCGGTGCTGCTGCTTAGAGTTGCAGGCTCCAATTTTTAAATTATCAGAACAAATTAGATTTTGGTTTTTCTTCCCTATTCAACAGTCTCACTTCATTTAAAGGGAATGATAAACTTCTTGTATCAGAGTTAGATTCAAGTTTGTTTTGCATATGCTTAACTGAGAATTTTGAGAACCACCTACTTTATGAAAAAAAAGAATTTTGAGAACA</gDNA_template>
            <first_frame> V  F  E  K  I  E  T  L  R  T  S  V  T  G  D  N  G :   Y  L  S  *  F  Y  A  Q  E  T  C  H  W  R  K  A  E  D  L  E  E  E  E  K  :  V  *  A  W  Q  T  A  R  K  H  K  A  G  A  K  C  *  D  C  *  K  D  K  S  P  R  R  *  C  E  V  A  C  F  E  V  G  Y  W  E  F  L  L  G  *  R  G  C  Y  K  E  D  S  S  V  G  C  G  V  *  R  L  *  Q  *  V  G  *  D  T  N  P  G  E  E  C  N  Y  S  G  *  R  S  S  I  *  A  V  V  S  P  A  L  W  S  *  N  R  S  Q  E  E  D  C  C  F  F  Q  K  G  R  R   : G  G  *  G  C  S  R  G  E  K  E  *  P  C  P  K  K  A  G  K  E  A  T  G  S  Q  D  *  P  T  C  R  G  A  I  C  *  W  A  S  I  G  C  N  L  I  A  T  W  P  V  W  S  C  *  W  :  L  H  I  G  R  K  G  T  *  I  L  H  E  E  T  S  E  E  E  R  E  G  C  R  C  C  C  L  E  L  Q  A  P  I  F  K  L  S  E  Q  I  R  F  W  F  F  F  P  I  Q  Q  S  H  F  I  *  R  E  *  *  T  S  C  I  R  V  R  F  K  F  V  L  H  M  L  N  *  E  F  *  E  P  P  T  L  *  K  K  R  I  L  R  T </first_frame>
            <second_frame>  S  L  R  K  S  K  P  *  G  P  P  S  P  A  T  M   : G  I  S  R  D  S  M  H  K  R  R  A  T  G  G  K  Q  K  T  W  R  K  K  R  K :   Y  E  L  G  R  Q  P  A  N  T  K  L  V  P  N  A  K  T  V  R  R  I  R  V  R  G  G  N  V  K  W  R  A  L  R  L  D  T  G  N  F  S  W  G  S  E  A  V  T  R  K  T  R  L  L  D  V  V  Y  N  A  S  N  N  E  L  V  R  T  Q  T  L  V  K  S  A  I  I  Q  V  D  A  A  P  F  K  Q  W  Y  L  Q  H  Y  G  V  E  I  G  R  K  K  K  T  A  A  S  S  K  K  E  G  E  :  E  A  E  A  V  A  E  E  K  K  S  N  H  V  Q  R  K  L  E  K  R  Q  Q  D  R  K  I  D  P  H  V  E  E  Q  F  A  S  G  R  L  L  A  A  I  S  S  R  P  G  Q  C  G  R  A  D  G :   Y  I  L  E  G  K  E  L  E  F  Y  M  K  K  L  Q  K  K  K  G  K  G  A  G  A  A  A  *  S  C  R  L  Q  F  L  N  Y  Q  N  K  L  D  F  G  F  S  S  L  F  N  S  L  T  S  F  K  G  N  D  K  L  L  V  S  E  L  D  S  S  L  F  C  I  C  L  T  E  N  F  E  N  H  L  L  Y  E  K  K  E  F  *  E   </second_frame>
            <third_frame>   L  *  E  N  R  N  P  K  D  L  R  H  R  R  Q  W  :  V  S  L  V  I  L  C  T  R  D  V  P  L  E  E  S  R  R  L  G  G  R  R  E   : S  M  S  L  A  D  S  P  Q  T  Q  S  W  C  Q  M  L  R  L  L  E  G  *  E  S  E  E  V  M  *  S  G  V  L  *  G  W  I  L  G  I  S  L  G  V  A  R  L  L  Q  G  R  L  V  C  W  M  W  C  I  T  P  L  T  M  S  W  L  G  H  K  P  W  *  R  V  Q  L  F  R  L  T  Q  L  H  L  S  S  G  I  S  S  T  M  E  L  K  S  V  A  R  R  R  L  L  L  L  P  K  R  K  E  R :   R  L  R  L  *  Q  R  R  K  R  V  T  M  S  K  E  S  W  K  R  G  N  R  I  A  R  L  T  H  M  S  R  S  N  L  L  V  G  V  Y  W  L  Q  S  H  R  D  L  A  S  V  V  V  L  M   : V  T  Y  W  K  E  R  N  L  N  F  T  *  R  N  F  R  R  R  K  G  R  V  P  V  L  L  L  R  V  A  G  S  N  F  *  I  I  R  T  N  *  I  L  V  F  L  P  Y  S  T  V  S  L  H  L  K  G  M  I  N  F  L  Y  Q  S  *  I  Q  V  C  F  A  Y  A  *  L  R  I  L  R  T  T  Y  F  M  K  K  K  N  F  E  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0184E04.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52358" stop="52334"/>
                    <exon start="52217" stop="52145"/>
                    <exon start="51219" stop="50883"/>
                    <exon start="50651" stop="50485"/>
                    <exon start="50390" stop="50306"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>684</number_coding_nucleotides>
                  <number_encoded_amino_acids>228</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GPPSPATMGISRDSMHKRRATGGKQKTWRKKRKYELGRQPANTKLVPNAKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIIQVDAAPFKQWYLQHYGVEIGRKKKTAASSKKEGEEAEAVAEEKKSNHVQRKLEKRQQDRKIDPHVEEQFASGRLLAAISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGAGAAA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="53002" PGL_stop="56790"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="53002" e_stop="53260"/>
            <exon e_start="55550" e_stop="55678"/>
            <exon e_start="56038" e_stop="56222"/>
            <exon e_start="56448" e_stop="56790"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.984" acc_prob="0.810" e_score="1.000"/>
          <exon-intron don_prob="0.969" acc_prob="0.925" e_score="1.000"/>
          <exon-intron don_prob="0.667" acc_prob="0.485" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="53002" e_stop="53260" e_length="259"/>
          </exon>
          <intron i_serial="1" don_prob="0.984" acc_prob="0.810">
            <gDNA_intron_boundary i_start="53261" i_stop="55549" i_length="2289"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="55550" e_stop="55678" e_length="129"/>
          </exon>
          <intron i_serial="2" don_prob="0.969" acc_prob="0.925">
            <gDNA_intron_boundary i_start="55679" i_stop="56037" i_length="359"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="56038" e_stop="56222" e_length="185"/>
          </exon>
          <intron i_serial="3" don_prob="0.667" acc_prob="0.485">
            <gDNA_intron_boundary i_start="56223" i_stop="56447" i_length="225"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="56448" e_stop="56790" e_length="343"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53002" stop="53260"/>
              <exon start="55550" stop="55678"/>
              <exon start="56038" stop="56222"/>
              <exon start="56448" stop="56790"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U322999" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATATATTGTTTCCAAGTTGAGAGCTTTGTTCCCTCTATTGAAAAAAATGGGGTTTGCTGCAGATAGTACCATTTCAATGGCTAATATCTTTCTAAGAAGCTCTCATCATCATAAGAAAGATGTAAATTTGGGGTCTTGTATGAGAAAGGAAACATGGGGTTTTAATCTTTACTTGCCAAAGCTCAAGTACCAATCAAGAATCTCATTTTGTTGCAAGAATGAATCAATTGATTTTGAAGAAAGAACAAGTCCTAATGAG : GTCAAGAAAGAGATAGAGCAATGCTATGAATTAATACACAGGCTTGGTCGTGGTGTTGTGTATTTAGGATCTTCAAGGATTGGTCCTGGACATCCACACTACATAAAAACCTTTGAATTAGGGAACAAG : ATTGCAACTCTATTAGATTGTACGACATGGTCCGGGGCTGGGCCAGGCTTAATGGATGCTGCCACACAAGGTGCTCTACAAGCAGGGAAGCCCGTTGGCGGGTTCAAGATAGGTAAAGAAGCAGGGGAATGGACAGCTACAAATTTTCATCCATACTTACCATCAGAGAGTTATCTTACATGCAG : GTTTTTCTCCGCAAGGAAACACGGGCTGGTGGATGCTGTTGTGAGATGTAGAAGCTCTGAAAGGACAGCTGTTATCGCGCTTCCTGGAGGAATTGGTACCCTCGACGAGGTTTTTGAGATCATGGCTTTGATTCAACTCGAACGAATTGGCTCTCAACTTCCTGTTCCTTTGCTTCTAATGAACTATGATTCATTTTATACCAATTTGTTGGAGTTCCTCAATGATTGTGAGAAGTGGGGAACTGTCTCTAAGGGTGAAGTTGAATCATTGTGGAAAATTTGTACCAATAACTCAGAAGCTTTGGATTATTTGGCTGAATTTTATGGTCTTTCTACTATACAA</gDNA_template>
            <first_frame> I  Y  C  F  Q  V  E  S  F  V  P  S  I  E  K  N  G  V  C  C  R  *  Y  H  F  N  G  *  Y  L  S  K  K  L  S  S  S  *  E  R  C  K  F  G  V  L  Y  E  K  G  N  M  G  F  *  S  L  L  A  K  A  Q  V  P  I  K  N  L  I  L  L  Q  E  *  I  N  *  F  *  R  K  N  K  S  *  *   : G  Q  E  R  D  R  A  M  L  *  I  N  T  Q  A  W  S  W  C  C  V  F  R  I  F  K  D  W  S  W  T  S  T  L  H  K  N  L  *  I  R  E  Q   : D  C  N  S  I  R  L  Y  D  M  V  R  G  W  A  R  L  N  G  C  C  H  T  R  C  S  T  S  R  E  A  R  W  R  V  Q  D  R  *  R  S  R  G  M  D  S  Y  K  F  S  S  I  L  T  I  R  E  L  S  Y  M  Q  :  V  F  L  R  K  E  T  R  A  G  G  C  C  C  E  M  *  K  L  *  K  D  S  C  Y  R  A  S  W  R  N  W  Y  P  R  R  G  F  *  D  H  G  F  D  S  T  R  T  N  W  L  S  T  S  C  S  F  A  S  N  E  L  *  F  I  L  Y  Q  F  V  G  V  P  Q  *  L  *  E  V  G  N  C  L  *  G  *  S  *  I  I  V  E  N  L  Y  Q  *  L  R  S  F  G  L  F  G  *  I  L  W  S  F  Y  Y  T  </first_frame>
            <second_frame>  Y  I  V  S  K  L  R  A  L  F  P  L  L  K  K  M  G  F  A  A  D  S  T  I  S  M  A  N  I  F  L  R  S  S  H  H  H  K  K  D  V  N  L  G  S  C  M  R  K  E  T  W  G  F  N  L  Y  L  P  K  L  K  Y  Q  S  R  I  S  F  C  C  K  N  E  S  I  D  F  E  E  R  T  S  P  N  E  :  V  K  K  E  I  E  Q  C  Y  E  L  I  H  R  L  G  R  G  V  V  Y  L  G  S  S  R  I  G  P  G  H  P  H  Y  I  K  T  F  E  L  G  N  K  :  I  A  T  L  L  D  C  T  T  W  S  G  A  G  P  G  L  M  D  A  A  T  Q  G  A  L  Q  A  G  K  P  V  G  G  F  K  I  G  K  E  A  G  E  W  T  A  T  N  F  H  P  Y  L  P  S  E  S  Y  L  T  C  R :   F  F  S  A  R  K  H  G  L  V  D  A  V  V  R  C  R  S  S  E  R  T  A  V  I  A  L  P  G  G  I  G  T  L  D  E  V  F  E  I  M  A  L  I  Q  L  E  R  I  G  S  Q  L  P  V  P  L  L  L  M  N  Y  D  S  F  Y  T  N  L  L  E  F  L  N  D  C  E  K  W  G  T  V  S  K  G  E  V  E  S  L  W  K  I  C  T  N  N  S  E  A  L  D  Y  L  A  E  F  Y  G  L  S  T  I  Q </second_frame>
            <third_frame>   I  L  F  P  S  *  E  L  C  S  L  Y  *  K  K  W  G  L  L  Q  I  V  P  F  Q  W  L  I  S  F  *  E  A  L  I  I  I  R  K  M  *  I  W  G  L  V  *  E  R  K  H  G  V  L  I  F  T  C  Q  S  S  S  T  N  Q  E  S  H  F  V  A  R  M  N  Q  L  I  L  K  K  E  Q  V  L  M  R :   S  R  K  R  *  S  N  A  M  N  *  Y  T  G  L  V  V  V  L  C  I  *  D  L  Q  G  L  V  L  D  I  H  T  T  *  K  P  L  N  *  G  T  R :   L  Q  L  Y  *  I  V  R  H  G  P  G  L  G  Q  A  *  W  M  L  P  H  K  V  L  Y  K  Q  G  S  P  L  A  G  S  R  *  V  K  K  Q  G  N  G  Q  L  Q  I  F  I  H  T  Y  H  Q  R  V  I  L  H  A   : G  F  S  P  Q  G  N  T  G  W  W  M  L  L  *  D  V  E  A  L  K  G  Q  L  L  S  R  F  L  E  E  L  V  P  S  T  R  F  L  R  S  W  L  *  F  N  S  N  E  L  A  L  N  F  L  F  L  C  F  *  *  T  M  I  H  F  I  P  I  C  W  S  S  S  M  I  V  R  S  G  E  L  S  L  R  V  K  L  N  H  C  G  K  F  V  P  I  T  Q  K  L  W  I  I  W  L  N  F  M  V  F  L  L  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0184E04.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53003" stop="53260"/>
                    <exon start="55550" stop="55678"/>
                    <exon start="56038" stop="56222"/>
                    <exon start="56448" stop="56790"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>915</number_coding_nucleotides>
                  <number_encoded_amino_acids>305</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YIVSKLRALFPLLKKMGFAADSTISMANIFLRSSHHHKKDVNLGSCMRKETWGFNLYLPKLKYQSRISFCCKNESIDFEERTSPNEVKKEIEQCYELIHRLGRGVVYLGSSRIGPGHPHYIKTFELGNKIATLLDCTTWSGAGPGLMDAATQGALQAGKPVGGFKIGKEAGEWTATNFHPYLPSESYLTCRFFSARKHGLVDAVVRCRSSERTAVIALPGGIGTLDEVFEIMALIQLERIGSQLPVPLLLMNYDSFYTNLLEFLNDCEKWGTVSKGEVESLWKICTNNSEALDYLAEFYGLSTIQ</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="66000" PGL_stop="62780"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="66000" e_stop="65738"/>
            <exon e_start="64710" e_stop="64646"/>
            <exon e_start="64519" e_stop="64447"/>
            <exon e_start="64373" e_stop="64320"/>
            <exon e_start="63217" e_stop="62780"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.963" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.358" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.966" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="66000" e_stop="65738" e_length="263"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.963">
            <gDNA_intron_boundary i_start="65737" i_stop="64711" i_length="1027"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="64710" e_stop="64646" e_length="65"/>
          </exon>
          <intron i_serial="2" don_prob="0.984" acc_prob="0.000">
            <gDNA_intron_boundary i_start="64645" i_stop="64520" i_length="126"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="64519" e_stop="64447" e_length="73"/>
          </exon>
          <intron i_serial="3" don_prob="0.358" acc_prob="0.967">
            <gDNA_intron_boundary i_start="64446" i_stop="64374" i_length="73"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="64373" e_stop="64320" e_length="54"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.966">
            <gDNA_intron_boundary i_start="64319" i_stop="63218" i_length="1102"/>
          </intron>
          <exon e_serial="5" e_score="0.998">
            <gDNA_exon_boundary e_start="63217" e_stop="62780" e_length="438"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66000" stop="65738"/>
              <exon start="64710" stop="64646"/>
              <exon start="64519" stop="64447"/>
              <exon start="64373" stop="64320"/>
              <exon start="63217" stop="62780"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U322316" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAATATCTTAGAACTTTTAGATTGACAAAACTTAGGGTTTAGCATTTGGAAATTGAGAATGGCGACGCCGACGACCTCACCGAACTCTGAATCCGATTCCGACGTTGAAACAAGTCCGGTGGCGAACCCGTCACCCGGACAGAATCCTCAATTCACCTCTGATGCGTTAACCACTGCGATTCCGTCTACTCCAGTCGTATGCCTCCTTAGGTTCGCCGGTGACTCTGCTGCTGGAGCCTTCATGGGATCCATTTTCGGATACG : GCTCAGGATTAATAAAGAAGAAAGGTTTTAAAGGATCCTTTGGGGAAGCAGGAGCTTCGGCAAAG : ACTTTTGCAGTTTTATCAGGAGTTCATAGTTTAGTTGTCTGTTTCTTGAAGAGAATACGGGGAAAAGATGATG : TTATCAATGCTGGAGTAGCTGGATGTTGCACTGGTCTTGCCCTAAGTTTTCCAG : GTGCACCTCAGGCTCTACTACAGAGTTGTCTCACCTTTGGGGCATTTTCTTTCATCATCGAAGGTCTTAACAAGCAGCAACCTGCATTAGCTCTTACATCTCACATGAATGTCAACAGTAGACAGCAATTTGGTGTGCTTGCTCCTTTATCTCTACCTCTACCAAATGAGCTCAAGGAATCCTTTTCATTCTTCTGCCAGTCCCTTAAAAATCGTCGACATGGCTCCCGTTAGATAGTGAAGAAATGCAAAAAAATGTCGTTTTCAACCATTTGGCACTATTATCAAGTTTTGTAAATTGTAATCGACTTACCTTTATCCTGCTTTAAGAGTGATAATTCTTGCTGTGTCTCTTTTATTAATACAAAACAATTTTGCAAGGGACTATAATTTTCTCCTTGAAGGTTCATATCCATTTTCATGGTGAATTGTTTCTTAG</gDNA_template>
            <first_frame> K  Y  L  R  T  F  R  L  T  K  L  R  V  *  H  L  E  I  E  N  G  D  A  D  D  L  T  E  L  *  I  R  F  R  R  *  N  K  S  G  G  E  P  V  T  R  T  E  S  S  I  H  L  *  C  V  N  H  C  D  S  V  Y  S  S  R  M  P  P  *  V  R  R  *  L  C  C  W  S  L  H  G  I  H  F  R  I  R :   L  R  I  N  K  E  E  R  F  *  R  I  L  W  G  S  R  S  F  G  K   : D  F  C  S  F  I  R  S  S  *  F  S  C  L  F  L  E  E  N  T  G  K  R  *  C :   Y  Q  C  W  S  S  W  M  L  H  W  S  C  P  K  F  S  R :   C  T  S  G  S  T  T  E  L  S  H  L  W  G  I  F  F  H  H  R  R  S  *  Q  A  A  T  C  I  S  S  Y  I  S  H  E  C  Q  Q  *  T  A  I  W  C  A  C  S  F  I  S  T  S  T  K  *  A  Q  G  I  L  F  I  L  L  P  V  P  *  K  S  S  T  W  L  P  L  D  S  E  E  M  Q  K  N  V  V  F  N  H  L  A  L  L  S  S  F  V  N  C  N  R  L  T  F  I  L  L  *  E  *  *  F  L  L  C  L  F  Y  *  Y  K  T  I  L  Q  G  T  I  I  F  S  L  K  V  H  I  H  F  H  G  E  L  F  L   </first_frame>
            <second_frame>  N  I  L  E  L  L  D  *  Q  N  L  G  F  S  I  W  K  L  R  M  A  T  P  T  T  S  P  N  S  E  S  D  S  D  V  E  T  S  P  V  A  N  P  S  P  G  Q  N  P  Q  F  T  S  D  A  L  T  T  A  I  P  S  T  P  V  V  C  L  L  R  F  A  G  D  S  A  A  G  A  F  M  G  S  I  F  G  Y   : G  S  G  L  I  K  K  K  G  F  K  G  S  F  G  E  A  G  A  S  A  K  :  T  F  A  V  L  S  G  V  H  S  L  V  V  C  F  L  K  R  I  R  G  K  D  D   : V  I  N  A  G  V  A  G  C  C  T  G  L  A  L  S  F  P   : G  A  P  Q  A  L  L  Q  S  C  L  T  F  G  A  F  S  F  I  I  E  G  L  N  K  Q  Q  P  A  L  A  L  T  S  H  M  N  V  N  S  R  Q  Q  F  G  V  L  A  P  L  S  L  P  L  P  N  E  L  K  E  S  F  S  F  F  C  Q  S  L  K  N  R  R  H  G  S  R  *  I  V  K  K  C  K  K  M  S  F  S  T  I  W  H  Y  Y  Q  V  L  *  I  V  I  D  L  P  L  S  C  F  K  S  D  N  S  C  C  V  S  F  I  N  T  K  Q  F  C  K  G  L  *  F  S  P  *  R  F  I  S  I  F  M  V  N  C  F  L  </second_frame>
            <third_frame>   I  S  *  N  F  *  I  D  K  T  *  G  L  A  F  G  N  *  E  W  R  R  R  R  P  H  R  T  L  N  P  I  P  T  L  K  Q  V  R  W  R  T  R  H  P  D  R  I  L  N  S  P  L  M  R  *  P  L  R  F  R  L  L  Q  S  Y  A  S  L  G  S  P  V  T  L  L  L  E  P  S  W  D  P  F  S  D  T  :  A  Q  D  *  *  R  R  K  V  L  K  D  P  L  G  K  Q  E  L  R  Q  R :   L  L  Q  F  Y  Q  E  F  I  V  *  L  S  V  S  *  R  E  Y  G  E  K  M  M  :  L  S  M  L  E  *  L  D  V  A  L  V  L  P  *  V  F  Q  :  V  H  L  R  L  Y  Y  R  V  V  S  P  L  G  H  F  L  S  S  S  K  V  L  T  S  S  N  L  H  *  L  L  H  L  T  *  M  S  T  V  D  S  N  L  V  C  L  L  L  Y  L  Y  L  Y  Q  M  S  S  R  N  P  F  H  S  S  A  S  P  L  K  I  V  D  M  A  P  V  R  *  *  R  N  A  K  K  C  R  F  Q  P  F  G  T  I  I  K  F  C  K  L  *  S  T  Y  L  Y  P  A  L  R  V  I  I  L  A  V  S  L  L  L  I  Q  N  N  F  A  R  D  Y  N  F  L  L  E  G  S  Y  P  F  S  W  *  I  V  S  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0184E04.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="65975" stop="65738"/>
                    <exon start="64710" stop="64646"/>
                    <exon start="64519" stop="64447"/>
                    <exon start="64373" stop="64320"/>
                    <exon start="63217" stop="62985"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>660</number_coding_nucleotides>
                  <number_encoded_amino_acids>220</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QNLGFSIWKLRMATPTTSPNSESDSDVETSPVANPSPGQNPQFTSDALTTAIPSTPVVCLLRFAGDSAAGAFMGSIFGYGSGLIKKKGFKGSFGEAGASAKTFAVLSGVHSLVVCFLKRIRGKDDVINAGVAGCCTGLALSFPGAPQALLQSCLTFGAFSFIIEGLNKQQPALALTSHMNVNSRQQFGVLAPLSLPLPNELKESFSFFCQSLKNRRHGSR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="72771" PGL_stop="66562"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="72771" e_stop="72466"/>
            <exon e_start="72226" e_stop="72092"/>
            <exon e_start="71616" e_stop="71533"/>
            <exon e_start="71449" e_stop="71324"/>
            <exon e_start="71240" e_stop="71181"/>
            <exon e_start="71097" e_stop="71044"/>
            <exon e_start="70947" e_stop="70855"/>
            <exon e_start="70723" e_stop="70628"/>
            <exon e_start="70446" e_stop="70298"/>
            <exon e_start="69957" e_stop="69808"/>
            <exon e_start="69586" e_stop="69457"/>
            <exon e_start="69365" e_stop="68451"/>
            <exon e_start="68357" e_stop="68259"/>
            <exon e_start="68170" e_stop="68036"/>
            <exon e_start="67946" e_stop="67158"/>
            <exon e_start="67072" e_stop="66562"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.966" acc_prob="1.000" e_score="0.993"/>
          <exon-intron don_prob="0.984" acc_prob="0.998" e_score="0.985"/>
          <exon-intron don_prob="1.000" acc_prob="0.823" e_score="1.000"/>
          <exon-intron don_prob="0.869" acc_prob="0.682" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.859" acc_prob="0.792" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.974" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.911" acc_prob="0.999" e_score="0.992"/>
          <exon-intron don_prob="0.997" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.895" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="72771" e_stop="72466" e_length="306"/>
          </exon>
          <intron i_serial="1" don_prob="0.966" acc_prob="1.000">
            <gDNA_intron_boundary i_start="72465" i_stop="72227" i_length="239"/>
          </intron>
          <exon e_serial="2" e_score="0.985">
            <gDNA_exon_boundary e_start="72226" e_stop="72092" e_length="135"/>
          </exon>
          <intron i_serial="2" don_prob="0.984" acc_prob="0.998">
            <gDNA_intron_boundary i_start="72091" i_stop="71617" i_length="475"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="71616" e_stop="71533" e_length="84"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.823">
            <gDNA_intron_boundary i_start="71532" i_stop="71450" i_length="83"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="71449" e_stop="71324" e_length="126"/>
          </exon>
          <intron i_serial="4" don_prob="0.869" acc_prob="0.682">
            <gDNA_intron_boundary i_start="71323" i_stop="71241" i_length="83"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="71240" e_stop="71181" e_length="60"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.986">
            <gDNA_intron_boundary i_start="71180" i_stop="71098" i_length="83"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="71097" e_stop="71044" e_length="54"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.996">
            <gDNA_intron_boundary i_start="71043" i_stop="70948" i_length="96"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="70947" e_stop="70855" e_length="93"/>
          </exon>
          <intron i_serial="7" don_prob="0.984" acc_prob="0.998">
            <gDNA_intron_boundary i_start="70854" i_stop="70724" i_length="131"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="70723" e_stop="70628" e_length="96"/>
          </exon>
          <intron i_serial="8" don_prob="0.859" acc_prob="0.792">
            <gDNA_intron_boundary i_start="70627" i_stop="70447" i_length="181"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="70446" e_stop="70298" e_length="149"/>
          </exon>
          <intron i_serial="9" don_prob="0.994" acc_prob="0.999">
            <gDNA_intron_boundary i_start="70297" i_stop="69958" i_length="340"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="69957" e_stop="69808" e_length="150"/>
          </exon>
          <intron i_serial="10" don_prob="0.987" acc_prob="0.985">
            <gDNA_intron_boundary i_start="69807" i_stop="69587" i_length="221"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="69586" e_stop="69457" e_length="130"/>
          </exon>
          <intron i_serial="11" don_prob="0.974" acc_prob="0.999">
            <gDNA_intron_boundary i_start="69456" i_stop="69366" i_length="91"/>
          </intron>
          <exon e_serial="12" e_score="0.992">
            <gDNA_exon_boundary e_start="69365" e_stop="68451" e_length="915"/>
          </exon>
          <intron i_serial="12" don_prob="0.911" acc_prob="0.999">
            <gDNA_intron_boundary i_start="68450" i_stop="68358" i_length="93"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="68357" e_stop="68259" e_length="99"/>
          </exon>
          <intron i_serial="13" don_prob="0.997" acc_prob="0.991">
            <gDNA_intron_boundary i_start="68258" i_stop="68171" i_length="88"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="68170" e_stop="68036" e_length="135"/>
          </exon>
          <intron i_serial="14" don_prob="0.996" acc_prob="0.997">
            <gDNA_intron_boundary i_start="68035" i_stop="67947" i_length="89"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="67946" e_stop="67158" e_length="789"/>
          </exon>
          <intron i_serial="15" don_prob="0.895" acc_prob="1.000">
            <gDNA_intron_boundary i_start="67157" i_stop="67073" i_length="85"/>
          </intron>
          <exon e_serial="16" e_score="0.986">
            <gDNA_exon_boundary e_start="67072" e_stop="66562" e_length="511"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72771" stop="72466"/>
              <exon start="72226" stop="72092"/>
              <exon start="71616" stop="71533"/>
              <exon start="71449" stop="71324"/>
              <exon start="71240" stop="71181"/>
              <exon start="71097" stop="71044"/>
              <exon start="70947" stop="70855"/>
              <exon start="70723" stop="70628"/>
              <exon start="70446" stop="70298"/>
              <exon start="69957" stop="69808"/>
              <exon start="69586" stop="69457"/>
              <exon start="69365" stop="68451"/>
              <exon start="68357" stop="68259"/>
              <exon start="68170" stop="68036"/>
              <exon start="67946" stop="67158"/>
              <exon start="67072" stop="66562"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U343900" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTTAGTTCAGAAATGTCAGAAAACAGATTCTTAGGCAACATTTCTGCGTCTTCGTTCCGAAATCTACTTCCAAAATCAGTTTCAACTAAGAAAAAGTTGAGTTCAAGTAGATTTAAGCATAAAATGAACAGTGAAAATGTTGCTCCTATAGATCCCAACGTTCAGATCAGTGATCCACCGTTGTTACCTACGAGTTCGATACTTAAAAAAACCGTCTTGAAGACGATTGATAGTGATGTATCGACAGAACTCACCAGATCTGTTGCACAGGAACAAACATCAGAAGCTCCTGATCCACCAGTTAAG : GTTGTTGCAAGGATTAAACCTGCTAATGGTATTGAGAGTGGAACCCAAGCGGTTCGCAAAGCTTCTGATACCTCAGTGTGTGTTGCTGATAGAAAGTTTAACTTTGACATGGTTTTTGGTTCAAATTCGAATCAG : GAAGATGTATTTCAATCGGTTGGTGCCCCTTTAGTTAAGGATGCATTGGCAGGTTACAACACTTCTCTCTTAGCTTATGGACAG : ACTGGAAGTGGCAAGACTTATACAATGTGGGGACCTCCTAGTTCCATTGTTGAAGTTCCATCACCTAATGGTCTTCAAGGCATTGTGCCGCGCATTTTTCAGACATTGTTTTCTAGTATACAAAAA : GAGCAAGAGAACTCTGAAGGTAAACAGATAAATTACCAGTGTCGTTGCTCGTTCCTAGAG : ATATATGATGAACACATTGGGGATCTACTTGATCCTACACAGAGAAACTTAAAG : ATAATGGATGATCCAAGAGTTGGATTCTATGTTGAGAACATAACTGAGGAATATGTGTCTACCTACGAGGATGTATCACAAATGTTGATTAAG : GGTCTTTCAAGTAGAAAAGTTGGATCAACGAGCATCAATTCGAAGAGTTCTAGGTCCCATATTGTTTTTACCTGCGTCATTGAGTCCTGGTGCAAG : GAGTCCTCATCAACGTGTTTTGGTAGCTCAAAGATGAGCAGAATGAGCCTTGTTGATCTTGCTGGATTTGACAAAAATATACCTGATGATGCCGGTAAACAGCTTGTTAAGGAAGGGAAGTATGTAAAGAAGTCCACATCACTGCTCGG : GCATTTGGTTAATGTCCTCTCTGAAAGGAGTCAGTCCAGGAAACTTGAGGATGTTTCGTACAGCAGTTCCACTTTGACTCATTTAATGAGAGAATCACTTGGTGGGAATGCTAAACTCTCCGTCATATGTGCTATCAGCCCAGAAAACAA : GCATAATAGTGAAACAGTAAGCACTCTGAGATTTGGGAAACGGGTTAAACTCACACCAAATGAGCCATTGGTAAATGAAATAACAGAAGACGATGTTAATGGCCTGAGTGATCAGATTCGCCAATTGAAG : GAAGAGCTTATAAGAGCTCGGTCAAGTGCAAGCATTTCAGTCGGAAGCAACTATGGATCCTTCAGAGGACCAAATGTACGTGAAAGTTTGAATCAGTTGAGAGTGAGCCTTAACCGTTCACTCATCTTACCTGACATAGATAATGAGCGTGAAGAAGAAGAGGTTCACATAAATGAGGATGATATAAAAGAACTACAGCTCCAGATCAATAACTTACGTGGTTCACGTGGAAATAACTCAAACTCTCTCAAGTATTCATCTGGAGAAAGTGAACACTATCTCAGCTGTTCAGAAGAAAGTGAAGGTGAAGAAATTAACTCAGATGAGATACTGGAGGAGACCCTTGATGATGCTGACCAAGAGATGGAAACGATGCAGCCTGAATACTGTAGCAGCATCTCAATAGGCCCATCCCGCCATTCTGCTGATCTTCCTGGCCCGGTGTTATCTGAGTCCCCAAAGTTTCGGAACATGCAGAGGAAGAGCTTAATTATCTCCGGTGAAGATAATATTCAAAGTTCCTCCAAAAGTTCTGAATTGCCTTCCCTGCCACAGAAACAAGACCTTGTCCAGTCTTCTTTGAGGTCCAGCAGAATATTTCCTGGGCCAACTGAATCCTTGGCTGCCAGTCTACATAGAGGACTAGAGATCATTGATTATCACCAAAGGAATTCCGCATCAAATAAATCTTTGGTTTCCTTCTCTTTTGAACATTTGGCAGTGAACCCAAGCCCAATGTCAAATGGTAAGGCCAATGCTTCTATTCAAACATCATCGGAAGAGGGACAATCTTCTCCTTTTGTAGCCGCTACATTCCTGTGTCCAAAGTGCAAGACGAAAGCAACATCCTCTAGTGTTGTTAAGGATAGCACTGGGACATGGATGGTTTCCATGGAAGGGACAAGTACGGATCAA : GATTCGGAGAAAGTTTTGTTCCAAGCTCTAGAGAGAGAGAAGCAGCTTGAAAGTGTATGCAAGGATCAAGCAGACAAAATTGAGCAGCTAAACCAACGA : CTAGCCCGCTGTAAGTGCACACAAGAACAGAGTTCTTTAGTTGATTGTGGCAAGGATGTCGTTGATCTCCACGACAATGAGAATCAAGCTTCAATAATCTATCAGAATGGGAGTCAATCACCCAACATCCCAAAG : CTCCTGAAATGGGACGATGAAAGTCCTGAGCCTGAAGCTGCAGGAGAGAAGTATGAAACTAAAGAAATTCAGGGCAATGTCGAAAACAGTGGCGGGAAAAAAATGTTTGATATGGCTGAGAGAGAAGCACTACTTAAAGAAATTGGAGGCCTAAGGGCCCAATTGAAGTCAGATGGAGCCTCCACAAACAAATCACTTGAAAGAACCAGATCCTCTTTGTTAGCACAATCAATGCAGCTGAGAAAAAGTGGTGTATATGCTACTACGGGTTCTGGTGAAGAACTTGAGAAGGAAAGAGAAAGATGGACTGAGATGGAAAGTGAGTGGATTTGTCTAACTGATGAGCTTAGAATTGATCTTGAGGCTTATCGCCAGCGTGCAGAAAAGGTGGCAATGGAATTAATGTTGGAGAAGAAATGCACGGATGAGTTGGATGATGCCCTCAAAAGATCCGTCTTTGGGCAAGCCAGAATAATTGAGCATTACGCGGAATTACAGGAGAAGTACAACGACTTAGCTGAGAAGCATAAGTTGATCTTGCAAGGGATACAAGATGTGAAAAATGCTGCAGCAAAAGCAGGAAAGAAAGGCCATGGTGCTCGTTTCGCCAAGTCTCTCGCTGCAGAGCTGTCAGCTTTGAGAGTGGAAAGGGAAAGAGAGAGGGAAATGCTGAAAAAGGAGAATAAAAGCTTGAGAGTTCAACTTAAAGACACTGCTGAAGCTGTTCATGCAGCCGGAGAACTTCTTGTTAGATTGAGAGAAGCGGAGGAAACAGCTTCACTTGCTGAG : GAGAACTTTACACAATCAAAGGAAGAGAATGAGAGATTGAAGAAGCAAATAGAGAAGCTGAAGAGAAAACATAAGATGGAGATGATAACAATGAAACAGTATCTTGCTGAAAGCCGATTGCCAGAAGCAGCGTTGAGACCGCCTATTTACAGGCAAGACTCTGATGTAGCAAACAATGACAACAACAACACCATCCAACATTCTGAGTATGATGATGATCAATCATGGAGAGCAGAATTTGGCGCTATTTATCAAGAACACATATGAGCCATGTTTGATTGAACTATGGAAACACGTGAAGACCCTGCTCGGGACTTTGCTGAAAAAAACCTGCTCATCTTGATCACACCTTAGTGTTATTCAGGGATGAATTGGCTGTATTCTTATTGATTTTATCATTCTTTTGAAACTTGATTGACCAGATTTGACATTTGTTGTGAGCTGTTTCTTCAGCTTGTTAATAATAATGCTTATGTATCCTAAAAAGTCATTCAACTTTATGCACAAGTAT</gDNA_template>
            <first_frame> L  S  S  E  M  S  E  N  R  F  L  G  N  I  S  A  S  S  F  R  N  L  L  P  K  S  V  S  T  K  K  K  L  S  S  S  R  F  K  H  K  M  N  S  E  N  V  A  P  I  D  P  N  V  Q  I  S  D  P  P  L  L  P  T  S  S  I  L  K  K  T  V  L  K  T  I  D  S  D  V  S  T  E  L  T  R  S  V  A  Q  E  Q  T  S  E  A  P  D  P  P  V  K  :  V  V  A  R  I  K  P  A  N  G  I  E  S  G  T  Q  A  V  R  K  A  S  D  T  S  V  C  V  A  D  R  K  F  N  F  D  M  V  F  G  S  N  S  N  Q  :  E  D  V  F  Q  S  V  G  A  P  L  V  K  D  A  L  A  G  Y  N  T  S  L  L  A  Y  G  Q  :  T  G  S  G  K  T  Y  T  M  W  G  P  P  S  S  I  V  E  V  P  S  P  N  G  L  Q  G  I  V  P  R  I  F  Q  T  L  F  S  S  I  Q  K  :  E  Q  E  N  S  E  G  K  Q  I  N  Y  Q  C  R  C  S  F  L  E  :  I  Y  D  E  H  I  G  D  L  L  D  P  T  Q  R  N  L  K  :  I  M  D  D  P  R  V  G  F  Y  V  E  N  I  T  E  E  Y  V  S  T  Y  E  D  V  S  Q  M  L  I  K  :  G  L  S  S  R  K  V  G  S  T  S  I  N  S  K  S  S  R  S  H  I  V  F  T  C  V  I  E  S  W  C  K  :  E  S  S  S  T  C  F  G  S  S  K  M  S  R  M  S  L  V  D  L  A  G  F  D  K  N  I  P  D  D  A  G  K  Q  L  V  K  E  G  K  Y  V  K  K  S  T  S  L  L  G :   H  L  V  N  V  L  S  E  R  S  Q  S  R  K  L  E  D  V  S  Y  S  S  S  T  L  T  H  L  M  R  E  S  L  G  G  N  A  K  L  S  V  I  C  A  I  S  P  E  N  K :   H  N  S  E  T  V  S  T  L  R  F  G  K  R  V  K  L  T  P  N  E  P  L  V  N  E  I  T  E  D  D  V  N  G  L  S  D  Q  I  R  Q  L  K  :  E  E  L  I  R  A  R  S  S  A  S  I  S  V  G  S  N  Y  G  S  F  R  G  P  N  V  R  E  S  L  N  Q  L  R  V  S  L  N  R  S  L  I  L  P  D  I  D  N  E  R  E  E  E  E  V  H  I  N  E  D  D  I  K  E  L  Q  L  Q  I  N  N  L  R  G  S  R  G  N  N  S  N  S  L  K  Y  S  S  G  E  S  E  H  Y  L  S  C  S  E  E  S  E  G  E  E  I  N  S  D  E  I  L  E  E  T  L  D  D  A  D  Q  E  M  E  T  M  Q  P  E  Y  C  S  S  I  S  I  G  P  S  R  H  S  A  D  L  P  G  P  V  L  S  E  S  P  K  F  R  N  M  Q  R  K  S  L  I  I  S  G  E  D  N  I  Q  S  S  S  K  S  S  E  L  P  S  L  P  Q  K  Q  D  L  V  Q  S  S  L  R  S  S  R  I  F  P  G  P  T  E  S  L  A  A  S  L  H  R  G  L  E  I  I  D  Y  H  Q  R  N  S  A  S  N  K  S  L  V  S  F  S  F  E  H  L  A  V  N  P  S  P  M  S  N  G  K  A  N  A  S  I  Q  T  S  S  E  E  G  Q  S  S  P  F  V  A  A  T  F  L  C  P  K  C  K  T  K  A  T  S  S  S  V  V  K  D  S  T  G  T  W  M  V  S  M  E  G  T  S  T  D  Q  :  D  S  E  K  V  L  F  Q  A  L  E  R  E  K  Q  L  E  S  V  C  K  D  Q  A  D  K  I  E  Q  L  N  Q  R  :  L  A  R  C  K  C  T  Q  E  Q  S  S  L  V  D  C  G  K  D  V  V  D  L  H  D  N  E  N  Q  A  S  I  I  Y  Q  N  G  S  Q  S  P  N  I  P  K  :  L  L  K  W  D  D  E  S  P  E  P  E  A  A  G  E  K  Y  E  T  K  E  I  Q  G  N  V  E  N  S  G  G  K  K  M  F  D  M  A  E  R  E  A  L  L  K  E  I  G  G  L  R  A  Q  L  K  S  D  G  A  S  T  N  K  S  L  E  R  T  R  S  S  L  L  A  Q  S  M  Q  L  R  K  S  G  V  Y  A  T  T  G  S  G  E  E  L  E  K  E  R  E  R  W  T  E  M  E  S  E  W  I  C  L  T  D  E  L  R  I  D  L  E  A  Y  R  Q  R  A  E  K  V  A  M  E  L  M  L  E  K  K  C  T  D  E  L  D  D  A  L  K  R  S  V  F  G  Q  A  R  I  I  E  H  Y  A  E  L  Q  E  K  Y  N  D  L  A  E  K  H  K  L  I  L  Q  G  I  Q  D  V  K  N  A  A  A  K  A  G  K  K  G  H  G  A  R  F  A  K  S  L  A  A  E  L  S  A  L  R  V  E  R  E  R  E  R  E  M  L  K  K  E  N  K  S  L  R  V  Q  L  K  D  T  A  E  A  V  H  A  A  G  E  L  L  V  R  L  R  E  A  E  E  T  A  S  L  A  E  :  E  N  F  T  Q  S  K  E  E  N  E  R  L  K  K  Q  I  E  K  L  K  R  K  H  K  M  E  M  I  T  M  K  Q  Y  L  A  E  S  R  L  P  E  A  A  L  R  P  P  I  Y  R  Q  D  S  D  V  A  N  N  D  N  N  N  T  I  Q  H  S  E  Y  D  D  D  Q  S  W  R  A  E  F  G  A  I  Y  Q  E  H  I  *  A  M  F  D  *  T  M  E  T  R  E  D  P  A  R  D  F  A  E  K  N  L  L  I  L  I  T  P  *  C  Y  S  G  M  N  W  L  Y  S  Y  *  F  Y  H  S  F  E  T  *  L  T  R  F  D  I  C  C  E  L  F  L  Q  L  V  N  N  N  A  Y  V  S  *  K  V  I  Q  L  Y  A  Q  V  </first_frame>
            <second_frame>  L  V  Q  K  C  Q  K  T  D  S  *  A  T  F  L  R  L  R  S  E  I  Y  F  Q  N  Q  F  Q  L  R  K  S  *  V  Q  V  D  L  S  I  K  *  T  V  K  M  L  L  L  *  I  P  T  F  R  S  V  I  H  R  C  Y  L  R  V  R  Y  L  K  K  P  S  *  R  R  L  I  V  M  Y  R  Q  N  S  P  D  L  L  H  R  N  K  H  Q  K  L  L  I  H  Q  L  R :   L  L  Q  G  L  N  L  L  M  V  L  R  V  E  P  K  R  F  A  K  L  L  I  P  Q  C  V  L  L  I  E  S  L  T  L  T  W  F  L  V  Q  I  R  I  R :   K  M  Y  F  N  R  L  V  P  L  *  L  R  M  H  W  Q  V  T  T  L  L  S  *  L  M  D  R :   L  E  V  A  R  L  I  Q  C  G  D  L  L  V  P  L  L  K  F  H  H  L  M  V  F  K  A  L  C  R  A  F  F  R  H  C  F  L  V  Y  K  K :   S  K  R  T  L  K  V  N  R  *  I  T  S  V  V  A  R  S  *  R :   Y  M  M  N  T  L  G  I  Y  L  I  L  H  R  E  T  *  R :   *  W  M  I  Q  E  L  D  S  M  L  R  T  *  L  R  N  M  C  L  P  T  R  M  Y  H  K  C  *  L  R :   V  F  Q  V  E  K  L  D  Q  R  A  S  I  R  R  V  L  G  P  I  L  F  L  P  A  S  L  S  P  G  A  R :   S  P  H  Q  R  V  L  V  A  Q  R  *  A  E  *  A  L  L  I  L  L  D  L  T  K  I  Y  L  M  M  P  V  N  S  L  L  R  K  G  S  M  *  R  S  P  H  H  C  S   : G  I  W  L  M  S  S  L  K  G  V  S  P  G  N  L  R  M  F  R  T  A  V  P  L  *  L  I  *  *  E  N  H  L  V  G  M  L  N  S  P  S  Y  V  L  S  A  Q  K  T   : S  I  I  V  K  Q  *  A  L  *  D  L  G  N  G  L  N  S  H  Q  M  S  H  W  *  M  K  *  Q  K  T  M  L  M  A  *  V  I  R  F  A  N  *  R :   K  S  L  *  E  L  G  Q  V  Q  A  F  Q  S  E  A  T  M  D  P  S  E  D  Q  M  Y  V  K  V  *  I  S  *  E  *  A  L  T  V  H  S  S  Y  L  T  *  I  M  S  V  K  K  K  R  F  T  *  M  R  M  I  *  K  N  Y  S  S  R  S  I  T  Y  V  V  H  V  E  I  T  Q  T  L  S  S  I  H  L  E  K  V  N  T  I  S  A  V  Q  K  K  V  K  V  K  K  L  T  Q  M  R  Y  W  R  R  P  L  M  M  L  T  K  R  W  K  R  C  S  L  N  T  V  A  A  S  Q  *  A  H  P  A  I  L  L  I  F  L  A  R  C  Y  L  S  P  Q  S  F  G  T  C  R  G  R  A  *  L  S  P  V  K  I  I  F  K  V  P  P  K  V  L  N  C  L  P  C  H  R  N  K  T  L  S  S  L  L  *  G  P  A  E  Y  F  L  G  Q  L  N  P  W  L  P  V  Y  I  E  D  *  R  S  L  I  I  T  K  G  I  P  H  Q  I  N  L  W  F  P  S  L  L  N  I  W  Q  *  T  Q  A  Q  C  Q  M  V  R  P  M  L  L  F  K  H  H  R  K  R  D  N  L  L  L  L  *  P  L  H  S  C  V  Q  S  A  R  R  K  Q  H  P  L  V  L  L  R  I  A  L  G  H  G  W  F  P  W  K  G  Q  V  R  I  K :   I  R  R  K  F  C  S  K  L  *  R  E  R  S  S  L  K  V  Y  A  R  I  K  Q  T  K  L  S  S  *  T  N  D :   *  P  A  V  S  A  H  K  N  R  V  L  *  L  I  V  A  R  M  S  L  I  S  T  T  M  R  I  K  L  Q  *  S  I  R  M  G  V  N  H  P  T  S  Q  S :   S  *  N  G  T  M  K  V  L  S  L  K  L  Q  E  R  S  M  K  L  K  K  F  R  A  M  S  K  T  V  A  G  K  K  C  L  I  W  L  R  E  K  H  Y  L  K  K  L  E  A  *  G  P  N  *  S  Q  M  E  P  P  Q  T  N  H  L  K  E  P  D  P  L  C  *  H  N  Q  C  S  *  E  K  V  V  Y  M  L  L  R  V  L  V  K  N  L  R  R  K  E  K  D  G  L  R  W  K  V  S  G  F  V  *  L  M  S  L  E  L  I  L  R  L  I  A  S  V  Q  K  R  W  Q  W  N  *  C  W  R  R  N  A  R  M  S  W  M  M  P  S  K  D  P  S  L  G  K  P  E  *  L  S  I  T  R  N  Y  R  R  S  T  T  T  *  L  R  S  I  S  *  S  C  K  G  Y  K  M  *  K  M  L  Q  Q  K  Q  E  R  K  A  M  V  L  V  S  P  S  L  S  L  Q  S  C  Q  L  *  E  W  K  G  K  E  R  G  K  C  *  K  R  R  I  K  A  *  E  F  N  L  K  T  L  L  K  L  F  M  Q  P  E  N  F  L  L  D  *  E  K  R  R  K  Q  L  H  L  L  R :   R  T  L  H  N  Q  R  K  R  M  R  D  *  R  S  K  *  R  S  *  R  E  N  I  R  W  R  *  *  Q  *  N  S  I  L  L  K  A  D  C  Q  K  Q  R  *  D  R  L  F  T  G  K  T  L  M  *  Q  T  M  T  T  T  T  P  S  N  I  L  S  M  M  M  I  N  H  G  E  Q  N  L  A  L  F  I  K  N  T  Y  E  P  C  L  I  E  L  W  K  H  V  K  T  L  L  G  T  L  L  K  K  T  C  S  S  *  S  H  L  S  V  I  Q  G  *  I  G  C  I  L  I  D  F  I  I  L  L  K  L  D  *  P  D  L  T  F  V  V  S  C  F  F  S  L  L  I  I  M  L  M  Y  P  K  K  S  F  N  F  M  H  K  Y </second_frame>
            <third_frame>   *  F  R  N  V  R  K  Q  I  L  R  Q  H  F  C  V  F  V  P  K  S  T  S  K  I  S  F  N  *  E  K  V  E  F  K  *  I  *  A  *  N  E  Q  *  K  C  C  S  Y  R  S  Q  R  S  D  Q  *  S  T  V  V  T  Y  E  F  D  T  *  K  N  R  L  E  D  D  *  *  *  C  I  D  R  T  H  Q  I  C  C  T  G  T  N  I  R  S  S  *  S  T  S  *   : G  C  C  K  D  *  T  C  *  W  Y  *  E  W  N  P  S  G  S  Q  S  F  *  Y  L  S  V  C  C  *  *  K  V  *  L  *  H  G  F  W  F  K  F  E  S   : G  R  C  I  S  I  G  W  C  P  F  S  *  G  C  I  G  R  L  Q  H  F  S  L  S  L  W  T   : D  W  K  W  Q  D  L  Y  N  V  G  T  S  *  F  H  C  *  S  S  I  T  *  W  S  S  R  H  C  A  A  H  F  S  D  I  V  F  *  Y  T  K   : R  A  R  E  L  *  R  *  T  D  K  L  P  V  S  L  L  V  P  R   : D  I  *  *  T  H  W  G  S  T  *  S  Y  T  E  K  L  K   : D  N  G  *  S  K  S  W  I  L  C  *  E  H  N  *  G  I  C  V  Y  L  R  G  C  I  T  N  V  D  *   : G  S  F  K  *  K  S  W  I  N  E  H  Q  F  E  E  F  *  V  P  Y  C  F  Y  L  R  H  *  V  L  V  Q   : G  V  L  I  N  V  F  W  *  L  K  D  E  Q  N  E  P  C  *  S  C  W  I  *  Q  K  Y  T  *  *  C  R  *  T  A  C  *  G  R  E  V  C  K  E  V  H  I  T  A  R  :  A  F  G  *  C  P  L  *  K  E  S  V  Q  E  T  *  G  C  F  V  Q  Q  F  H  F  D  S  F  N  E  R  I  T  W  W  E  C  *  T  L  R  H  M  C  Y  Q  P  R  K  Q  :  A  *  *  *  N  S  K  H  S  E  I  W  E  T  G  *  T  H  T  K  *  A  I  G  K  *  N  N  R  R  R  C  *  W  P  E  *  S  D  S  P  I  E   : G  R  A  Y  K  S  S  V  K  C  K  H  F  S  R  K  Q  L  W  I  L  Q  R  T  K  C  T  *  K  F  E  S  V  E  S  E  P  *  P  F  T  H  L  T  *  H  R  *  *  A  *  R  R  R  G  S  H  K  *  G  *  Y  K  R  T  T  A  P  D  Q  *  L  T  W  F  T  W  K  *  L  K  L  S  Q  V  F  I  W  R  K  *  T  L  S  Q  L  F  R  R  K  *  R  *  R  N  *  L  R  *  D  T  G  G  D  P  *  *  C  *  P  R  D  G  N  D  A  A  *  I  L  *  Q  H  L  N  R  P  I  P  P  F  C  *  S  S  W  P  G  V  I  *  V  P  K  V  S  E  H  A  E  E  E  L  N  Y  L  R  *  R  *  Y  S  K  F  L  Q  K  F  *  I  A  F  P  A  T  E  T  R  P  C  P  V  F  F  E  V  Q  Q  N  I  S  W  A  N  *  I  L  G  C  Q  S  T  *  R  T  R  D  H  *  L  S  P  K  E  F  R  I  K  *  I  F  G  F  L  L  F  *  T  F  G  S  E  P  K  P  N  V  K  W  *  G  Q  C  F  Y  S  N  I  I  G  R  G  T  I  F  S  F  C  S  R  Y  I  P  V  S  K  V  Q  D  E  S  N  I  L  *  C  C  *  G  *  H  W  D  M  D  G  F  H  G  R  D  K  Y  G  S   : R  F  G  E  S  F  V  P  S  S  R  E  R  E  A  A  *  K  C  M  Q  G  S  S  R  Q  N  *  A  A  K  P  T   : T  S  P  L  *  V  H  T  R  T  E  F  F  S  *  L  W  Q  G  C  R  *  S  P  R  Q  *  E  S  S  F  N  N  L  S  E  W  E  S  I  T  Q  H  P  K   : A  P  E  M  G  R  *  K  S  *  A  *  S  C  R  R  E  V  *  N  *  R  N  S  G  Q  C  R  K  Q  W  R  E  K  N  V  *  Y  G  *  E  R  S  T  T  *  R  N  W  R  P  K  G  P  I  E  V  R  W  S  L  H  K  Q  I  T  *  K  N  Q  I  L  F  V  S  T  I  N  A  A  E  K  K  W  C  I  C  Y  Y  G  F  W  *  R  T  *  E  G  K  R  K  M  D  *  D  G  K  *  V  D  L  S  N  *  *  A  *  N  *  S  *  G  L  S  P  A  C  R  K  G  G  N  G  I  N  V  G  E  E  M  H  G  *  V  G  *  C  P  Q  K  I  R  L  W  A  S  Q  N  N  *  A  L  R  G  I  T  G  E  V  Q  R  L  S  *  E  A  *  V  D  L  A  R  D  T  R  C  E  K  C  C  S  K  S  R  K  E  R  P  W  C  S  F  R  Q  V  S  R  C  R  A  V  S  F  E  S  G  K  G  K  R  E  G  N  A  E  K  G  E  *  K  L  E  S  S  T  *  R  H  C  *  S  C  S  C  S  R  R  T  S  C  *  I  E  R  S  G  G  N  S  F  T  C  *   : G  E  L  Y  T  I  K  G  R  E  *  E  I  E  E  A  N  R  E  A  E  E  K  T  *  D  G  D  D  N  N  E  T  V  S  C  *  K  P  I  A  R  S  S  V  E  T  A  Y  L  Q  A  R  L  *  C  S  K  Q  *  Q  Q  Q  H  H  P  T  F  *  V  *  *  *  S  I  M  E  S  R  I  W  R  Y  L  S  R  T  H  M  S  H  V  *  L  N  Y  G  N  T  *  R  P  C  S  G  L  C  *  K  K  P  A  H  L  D  H  T  L  V  L  F  R  D  E  L  A  V  F  L  L  I  L  S  F  F  *  N  L  I  D  Q  I  *  H  L  L  *  A  V  S  S  A  C  *  *  *  C  L  C  I  L  K  S  H  S  T  L  C  T  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0184E04.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="72771" stop="72466"/>
                    <exon start="72226" stop="72092"/>
                    <exon start="71616" stop="71533"/>
                    <exon start="71449" stop="71324"/>
                    <exon start="71240" stop="71181"/>
                    <exon start="71097" stop="71044"/>
                    <exon start="70947" stop="70855"/>
                    <exon start="70723" stop="70628"/>
                    <exon start="70446" stop="70298"/>
                    <exon start="69957" stop="69808"/>
                    <exon start="69586" stop="69457"/>
                    <exon start="69365" stop="68451"/>
                    <exon start="68357" stop="68259"/>
                    <exon start="68170" stop="68036"/>
                    <exon start="67946" stop="67158"/>
                    <exon start="67072" stop="66806"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>3585</number_coding_nucleotides>
                  <number_encoded_amino_acids>1195</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSSEMSENRFLGNISASSFRNLLPKSVSTKKKLSSSRFKHKMNSENVAPIDPNVQISDPPLLPTSSILKKTVLKTIDSDVSTELTRSVAQEQTSEAPDPPVKVVARIKPANGIESGTQAVRKASDTSVCVADRKFNFDMVFGSNSNQEDVFQSVGAPLVKDALAGYNTSLLAYGQTGSGKTYTMWGPPSSIVEVPSPNGLQGIVPRIFQTLFSSIQKEQENSEGKQINYQCRCSFLEIYDEHIGDLLDPTQRNLKIMDDPRVGFYVENITEEYVSTYEDVSQMLIKGLSSRKVGSTSINSKSSRSHIVFTCVIESWCKESSSTCFGSSKMSRMSLVDLAGFDKNIPDDAGKQLVKEGKYVKKSTSLLGHLVNVLSERSQSRKLEDVSYSSSTLTHLMRESLGGNAKLSVICAISPENKHNSETVSTLRFGKRVKLTPNEPLVNEITEDDVNGLSDQIRQLKEELIRARSSASISVGSNYGSFRGPNVRESLNQLRVSLNRSLILPDIDNEREEEEVHINEDDIKELQLQINNLRGSRGNNSNSLKYSSGESEHYLSCSEESEGEEINSDEILEETLDDADQEMETMQPEYCSSISIGPSRHSADLPGPVLSESPKFRNMQRKSLIISGEDNIQSSSKSSELPSLPQKQDLVQSSLRSSRIFPGPTESLAASLHRGLEIIDYHQRNSASNKSLVSFSFEHLAVNPSPMSNGKANASIQTSSEEGQSSPFVAATFLCPKCKTKATSSSVVKDSTGTWMVSMEGTSTDQDSEKVLFQALEREKQLESVCKDQADKIEQLNQRLARCKCTQEQSSLVDCGKDVVDLHDNENQASIIYQNGSQSPNIPKLLKWDDESPEPEAAGEKYETKEIQGNVENSGGKKMFDMAEREALLKEIGGLRAQLKSDGASTNKSLERTRSSLLAQSMQLRKSGVYATTGSGEELEKERERWTEMESEWICLTDELRIDLEAYRQRAEKVAMELMLEKKCTDELDDALKRSVFGQARIIEHYAELQEKYNDLAEKHKLILQGIQDVKNAAAKAGKKGHGARFAKSLAAELSALRVEREREREMLKKENKSLRVQLKDTAEAVHAAGELLVRLREAEETASLAEENFTQSKEENERLKKQIEKLKRKHKMEMITMKQYLAESRLPEAALRPPIYRQDSDVANNDNNNTIQHSEYDDDQSWRAEFGAIYQEHI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="77720" PGL_stop="81058"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="77720" e_stop="77895"/>
            <exon e_start="79514" e_stop="81058"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.287" acc_prob="0.983" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="77720" e_stop="77895" e_length="176"/>
          </exon>
          <intron i_serial="1" don_prob="0.287" acc_prob="0.983">
            <gDNA_intron_boundary i_start="77896" i_stop="79513" i_length="1618"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="79514" e_stop="81058" e_length="1545"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77720" stop="77895"/>
              <exon start="79514" stop="81058"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U315662" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GACTTTCTGACAAACTTCCAAATCCACTATCATCATTCTTGTTGATTTTATTCTCTGCAAATCACAATTATTCTCATCCTTTGCTTCGTTTTAAGAGTTGGGTTTTCTTCATTTTCCATAAAAGATCACTCTTTTGGGTAGATTTTTGGCTTGATAATCAGAGACTCAGTCTGTTG : GTTATATTTGTGGTCAGCTTCATGGATTCTCCACAGTCTGTTGTGTCACCATTTAAGAGTTCCTCCGTTTTCGCGGACTCTGAGAAGCAAAGCAATGAATTTTTCAGCAAGAACGCTTCTGGTCTATCCCGGGGAATTTCTGCTCATAGAGAGGATGTTGAAATCTGCAACATGGAGGACTTCATTGGTGTTCTCGACGTGTACGTACATCAGGCTAGAGATATCCACAACATCTGCATTTACCATAAACAAGATGTTTATGCAAAACTTTGCCTTACAAGTGATCCTGAAAGTGCAGTCTCCACTCAAACCATTAATGGCGGTGGGAAAAGTCCAGTCTTCAACGAAAATCTAAAGCTCAATGTTCGTACGATAAAATGTTCTGTTAAATGTGAGATATGGATGATGAGCAGGGTGAGGAATTATTTGGAAGACCAATTGTTGGGATTTGCACTAGTCCCCTTATCTGAAATCCTCATGAAAAATGGAAAGGTAGAAAAAGAGTTCTCTCCTTTTCGTCGACTGATCTCTTTCACTCCCCAGCAGGATTTGTGCACTTGTCCCTTTCTTACAATGGAACTTCACCTGAAGTTATTGAAATTCCTGCTTTTCCCATATTAGAAACTGATGCATCTCGGACAGACGGCGAAGCACGTGAGTCCCTTCCAAATGAGTTTGACAAAATTGAGTTCCCAGATCCTAAGATTGTAAATGAGAATAATCTCATGGTCTCCGAGTACTTCAATATGCCAAGCAGTAATCCAGATTCTCAAAGCTCGGATAGCTTGGTCTCTTCTGATACGGAAAACCAGCTCAGTCTAGAAGTCGATGTCCATATGGAAAATGTTCCAAGTGAGGCTACTAATTTCCACCAATATCCTAAGCGTGATTCGCCTCCTAGCAGCATATCAACCATTGACTCTCCAACAGTTTTGCATCCCGCAAGCTCTCAGTCCTCCGAGACCCAAGGAGCTTCCAAGTCGCCAGAGGAAGAATATGCATCAGCTTCTAAAGAATGTCCCACAGGTAAAAATAATGTTGGAAATGCTGAGAGCAACATATCGGAAAGCAAGCCACCCAGTGCATTTCCAAAGCCAGTGGTCATTGAGCCAGAGCAGAAGGTTGTGCAACAGGATATTGTGGATATGTACATGAAAAGTATGCAGCAATTTACTGAGTCATTGGCAAAGATGAAGCTTCCGCTGGACATTGAAAATGGGACAACCAGTTCTGATAATTCGAGTTCAGATCAGACATCGCAGACGCCCAAGAGCACTAGCTCAAGGGTGTTCTATGGCAGCAGAGCTTTCTTCTAAGCTTTTGTGAATGGTTCTCGAATAACTTATAGCGCGATTAGGAGCAAGTCTAAAAGGATAAGTGAACACTAAGGATTTTATGAATGTGGTGTTTATCCATTTTATCTTGTGAATGCTTAAAATGCTCTGAACTAATTAACTTTTTGTCTGTTGAAGACTTGTTTTACTTCAGTACCTTGTAGTTAATTAGAACTTCTGTTCTTAATATATGCTCAGCATTTCCCTTGGA</gDNA_template>
            <first_frame> D  F  L  T  N  F  Q  I  H  Y  H  H  S  C  *  F  Y  S  L  Q  I  T  I  I  L  I  L  C  F  V  L  R  V  G  F  S  S  F  S  I  K  D  H  S  F  G  *  I  F  G  L  I  I  R  D  S  V  C  W :   L  Y  L  W  S  A  S  W  I  L  H  S  L  L  C  H  H  L  R  V  P  P  F  S  R  T  L  R  S  K  A  M  N  F  S  A  R  T  L  L  V  Y  P  G  E  F  L  L  I  E  R  M  L  K  S  A  T  W  R  T  S  L  V  F  S  T  C  T  Y  I  R  L  E  I  S  T  T  S  A  F  T  I  N  K  M  F  M  Q  N  F  A  L  Q  V  I  L  K  V  Q  S  P  L  K  P  L  M  A  V  G  K  V  Q  S  S  T  K  I  *  S  S  M  F  V  R  *  N  V  L  L  N  V  R  Y  G  *  *  A  G  *  G  I  I  W  K  T  N  C  W  D  L  H  *  S  P  Y  L  K  S  S  *  K  M  E  R  *  K  K  S  S  L  L  F  V  D  *  S  L  S  L  P  S  R  I  C  A  L  V  P  F  L  Q  W  N  F  T  *  S  Y  *  N  S  C  F  S  H  I  R  N  *  C  I  S  D  R  R  R  S  T  *  V  P  S  K  *  V  *  Q  N  *  V  P  R  S  *  D  C  K  *  E  *  S  H  G  L  R  V  L  Q  Y  A  K  Q  *  S  R  F  S  K  L  G  *  L  G  L  F  *  Y  G  K  P  A  Q  S  R  S  R  C  P  Y  G  K  C  S  K  *  G  Y  *  F  P  P  I  S  *  A  *  F  A  S  *  Q  H  I  N  H  *  L  S  N  S  F  A  S  R  K  L  S  V  L  R  D  P  R  S  F  Q  V  A  R  G  R  I  C  I  S  F  *  R  M  S  H  R  *  K  *  C  W  K  C  *  E  Q  H  I  G  K  Q  A  T  Q  C  I  S  K  A  S  G  H  *  A  R  A  E  G  C  A  T  G  Y  C  G  Y  V  H  E  K  Y  A  A  I  Y  *  V  I  G  K  D  E  A  S  A  G  H  *  K  W  D  N  Q  F  *  *  F  E  F  R  S  D  I  A  D  A  Q  E  H  *  L  K  G  V  L  W  Q  Q  S  F  L  L  S  F  C  E  W  F  S  N  N  L  *  R  D  *  E  Q  V  *  K  D  K  *  T  L  R  I  L  *  M  W  C  L  S  I  L  S  C  E  C  L  K  C  S  E  L  I  N  F  L  S  V  E  D  L  F  Y  F  S  T  L  *  L  I  R  T  S  V  L  N  I  C  S  A  F  P  L   </first_frame>
            <second_frame>  T  F  *  Q  T  S  K  S  T  I  I  I  L  V  D  F  I  L  C  K  S  Q  L  F  S  S  F  A  S  F  *  E  L  G  F  L  H  F  P  *  K  I  T  L  L  G  R  F  L  A  *  *  S  E  T  Q  S  V   : G  Y  I  C  G  Q  L  H  G  F  S  T  V  C  C  V  T  I  *  E  F  L  R  F  R  G  L  *  E  A  K  Q  *  I  F  Q  Q  E  R  F  W  S  I  P  G  N  F  C  S  *  R  G  C  *  N  L  Q  H  G  G  L  H  W  C  S  R  R  V  R  T  S  G  *  R  Y  P  Q  H  L  H  L  P  *  T  R  C  L  C  K  T  L  P  Y  K  *  S  *  K  C  S  L  H  S  N  H  *  W  R  W  E  K  S  S  L  Q  R  K  S  K  A  Q  C  S  Y  D  K  M  F  C  *  M  *  D  M  D  D  E  Q  G  E  E  L  F  G  R  P  I  V  G  I  C  T  S  P  L  I  *  N  P  H  E  K  W  K  G  R  K  R  V  L  S  F  S  S  T  D  L  F  H  S  P  A  G  F  V  H  L  S  L  S  Y  N  G  T  S  P  E  V  I  E  I  P  A  F  P  I  L  E  T  D  A  S  R  T  D  G  E  A  R  E  S  L  P  N  E  F  D  K  I  E  F  P  D  P  K  I  V  N  E  N  N  L  M  V  S  E  Y  F  N  M  P  S  S  N  P  D  S  Q  S  S  D  S  L  V  S  S  D  T  E  N  Q  L  S  L  E  V  D  V  H  M  E  N  V  P  S  E  A  T  N  F  H  Q  Y  P  K  R  D  S  P  P  S  S  I  S  T  I  D  S  P  T  V  L  H  P  A  S  S  Q  S  S  E  T  Q  G  A  S  K  S  P  E  E  E  Y  A  S  A  S  K  E  C  P  T  G  K  N  N  V  G  N  A  E  S  N  I  S  E  S  K  P  P  S  A  F  P  K  P  V  V  I  E  P  E  Q  K  V  V  Q  Q  D  I  V  D  M  Y  M  K  S  M  Q  Q  F  T  E  S  L  A  K  M  K  L  P  L  D  I  E  N  G  T  T  S  S  D  N  S  S  S  D  Q  T  S  Q  T  P  K  S  T  S  S  R  V  F  Y  G  S  R  A  F  F  *  A  F  V  N  G  S  R  I  T  Y  S  A  I  R  S  K  S  K  R  I  S  E  H  *  G  F  Y  E  C  G  V  Y  P  F  Y  L  V  N  A  *  N  A  L  N  *  L  T  F  C  L  L  K  T  C  F  T  S  V  P  C  S  *  L  E  L  L  F  L  I  Y  A  Q  H  F  P  W  </second_frame>
            <third_frame>   L  S  D  K  L  P  N  P  L  S  S  F  L  L  I  L  F  S  A  N  H  N  Y  S  H  P  L  L  R  F  K  S  W  V  F  F  I  F  H  K  R  S  L  F  W  V  D  F  W  L  D  N  Q  R  L  S  L  L  :  V  I  F  V  V  S  F  M  D  S  P  Q  S  V  V  S  P  F  K  S  S  S  V  F  A  D  S  E  K  Q  S  N  E  F  F  S  K  N  A  S  G  L  S  R  G  I  S  A  H  R  E  D  V  E  I  C  N  M  E  D  F  I  G  V  L  D  V  Y  V  H  Q  A  R  D  I  H  N  I  C  I  Y  H  K  Q  D  V  Y  A  K  L  C  L  T  S  D  P  E  S  A  V  S  T  Q  T  I  N  G  G  G  K  S  P  V  F  N  E  N  L  K  L  N  V  R  T  I  K  C  S  V  K  C  E  I  W  M  M  S  R  V  R  N  Y  L  E  D  Q  L  L  G  F  A  L  V  P  L  S  E  I  L  M  K  N  G  K  V  E  K  E  F  S  P  F  R  R  L  I  S  F  T  P  Q  Q  D  L  C  T  C  P  F  L  T  M  E  L  H  L  K  L  L  K  F  L  L  F  P  Y  *  K  L  M  H  L  G  Q  T  A  K  H  V  S  P  F  Q  M  S  L  T  K  L  S  S  Q  I  L  R  L  *  M  R  I  I  S  W  S  P  S  T  S  I  C  Q  A  V  I  Q  I  L  K  A  R  I  A  W  S  L  L  I  R  K  T  S  S  V  *  K  S  M  S  I  W  K  M  F  Q  V  R  L  L  I  S  T  N  I  L  S  V  I  R  L  L  A  A  Y  Q  P  L  T  L  Q  Q  F  C  I  P  Q  A  L  S  P  P  R  P  K  E  L  P  S  R  Q  R  K  N  M  H  Q  L  L  K  N  V  P  Q  V  K  I  M  L  E  M  L  R  A  T  Y  R  K  A  S  H  P  V  H  F  Q  S  Q  W  S  L  S  Q  S  R  R  L  C  N  R  I  L  W  I  C  T  *  K  V  C  S  N  L  L  S  H  W  Q  R  *  S  F  R  W  T  L  K  M  G  Q  P  V  L  I  I  R  V  Q  I  R  H  R  R  R  P  R  A  L  A  Q  G  C  S  M  A  A  E  L  S  S  K  L  L  *  M  V  L  E  *  L  I  A  R  L  G  A  S  L  K  G  *  V  N  T  K  D  F  M  N  V  V  F  I  H  F  I  L  *  M  L  K  M  L  *  T  N  *  L  F  V  C  *  R  L  V  L  L  Q  Y  L  V  V  N  *  N  F  C  S  *  Y  M  L  S  I  S  L  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0184E04.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79984" stop="80829"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>843</number_coding_nucleotides>
                  <number_encoded_amino_acids>281</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NPHEKWKGRKRVLSFSSTDLFHSPAGFVHLSLSYNGTSPEVIEIPAFPILETDASRTDGEARESLPNEFDKIEFPDPKIVNENNLMVSEYFNMPSSNPDSQSSDSLVSSDTENQLSLEVDVHMENVPSEATNFHQYPKRDSPPSSISTIDSPTVLHPASSQSSETQGASKSPEEEYASASKECPTGKNNVGNAESNISESKPPSAFPKPVVIEPEQKVVQQDIVDMYMKSMQQFTESLAKMKLPLDIENGTTSSDNSSSDQTSQTPKSTSSRVFYGSRAFF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0184E04.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="77722" stop="77895"/>
                    <exon start="79514" stop="80134"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>792</number_coding_nucleotides>
                  <number_encoded_amino_acids>264</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSDKLPNPLSSFLLILFSANHNYSHPLLRFKSWVFFIFHKRSLFWVDFWLDNQRLSLLVIFVVSFMDSPQSVVSPFKSSSVFADSEKQSNEFFSKNASGLSRGISAHREDVEICNMEDFIGVLDVYVHQARDIHNICIYHKQDVYAKLCLTSDPESAVSTQTINGGGKSPVFNENLKLNVRTIKCSVKCEIWMMSRVRNYLEDQLLGFALVPLSEILMKNGKVEKEFSPFRRLISFTPQQDLCTCPFLTMELHLKLLKFLLFPY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="86672" PGL_stop="86034"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="86672" e_stop="86034"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.986">
            <gDNA_exon_boundary e_start="86672" e_stop="86034" e_length="639"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86672" stop="86034"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U344042" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGTGATATAGGTTAAGATTGGTGATTTGGGTTTTGCAACTATAGTAGGGAAGAGTCATTCAGCACATTCGGTTCTTGGAACCCCAGAGTTCATGGCACCGGAGTTGTATGATGAGGATTATACCGAGCTGATTGATATCTACTCGTTTGGGATGTGTGTTTTGGAGATGGTGACGTTGGAACTACCTTATAGTGAGTGTGATAACGTGGTGAAGATATACAAGAAGGTAATATCCGGAGTGAGGCCCAAGGCCATGGACAAGGTTAAAGATCTCGAGGTCAAGAAGTTCATTGAGAAGTGTCTTGCTCAGCCTAGGGTTAGACCCTCTGCTTCTGAACTCCTTCAAGACCCTTTCTTTAATGATATTAATGATGATGACGAAAACGACGATGAAGAGTATACTAGTAACAACTATTGGCATGCTTAAGTCAGCCATAGCTATTATTTGCTAGTTGCTATTATATTAGTTAGTTGTATTAGGTTTTGTTGTGATATTTTTGGTGTTGATTTGTTACTTATAGTGGTTTTTGCCTTTTCTTCCAAAAAGAAGAAAAGAAAATGGTTTTGCTTTTTATGAAACTATTGTAAAAGAAAAAACAATAGAAAAAAGAGTGTATTTTTATTAAGAAATTTGTACAT</gDNA_template>
            <first_frame> C  D  I  G  *  D  W  *  F  G  F  C  N  Y  S  R  E  E  S  F  S  T  F  G  S  W  N  P  R  V  H  G  T  G  V  V  *  *  G  L  Y  R  A  D  *  Y  L  L  V  W  D  V  C  F  G  D  G  D  V  G  T  T  L  *  *  V  *  *  R  G  E  D  I  Q  E  G  N  I  R  S  E  A  Q  G  H  G  Q  G  *  R  S  R  G  Q  E  V  H  *  E  V  S  C  S  A  *  G  *  T  L  C  F  *  T  P  S  R  P  F  L  *  *  Y  *  *  *  *  R  K  R  R  *  R  V  Y  *  *  Q  L  L  A  C  L  S  Q  P  *  L  L  F  A  S  C  Y  Y  I  S  *  L  Y  *  V  L  L  *  Y  F  W  C  *  F  V  T  Y  S  G  F  C  L  F  F  Q  K  E  E  K  K  M  V  L  L  F  M  K  L  L  *  K  K  K  Q  *  K  K  E  C  I  F  I  K  K  F  V  H </first_frame>
            <second_frame>  V  I  *  V  K  I  G  D  L  G  F  A  T  I  V  G  K  S  H  S  A  H  S  V  L  G  T  P  E  F  M  A  P  E  L  Y  D  E  D  Y  T  E  L  I  D  I  Y  S  F  G  M  C  V  L  E  M  V  T  L  E  L  P  Y  S  E  C  D  N  V  V  K  I  Y  K  K  V  I  S  G  V  R  P  K  A  M  D  K  V  K  D  L  E  V  K  K  F  I  E  K  C  L  A  Q  P  R  V  R  P  S  A  S  E  L  L  Q  D  P  F  F  N  D  I  N  D  D  D  E  N  D  D  E  E  Y  T  S  N  N  Y  W  H  A  *  V  S  H  S  Y  Y  L  L  V  A  I  I  L  V  S  C  I  R  F  C  C  D  I  F  G  V  D  L  L  L  I  V  V  F  A  F  S  S  K  K  K  K  R  K  W  F  C  F  L  *  N  Y  C  K  R  K  N  N  R  K  K  S  V  F  L  L  R  N  L  Y   </second_frame>
            <third_frame>   *  Y  R  L  R  L  V  I  W  V  L  Q  L  *  *  G  R  V  I  Q  H  I  R  F  L  E  P  Q  S  S  W  H  R  S  C  M  M  R  I  I  P  S  *  L  I  S  T  R  L  G  C  V  F  W  R  W  *  R  W  N  Y  L  I  V  S  V  I  T  W  *  R  Y  T  R  R  *  Y  P  E  *  G  P  R  P  W  T  R  L  K  I  S  R  S  R  S  S  L  R  S  V  L  L  S  L  G  L  D  P  L  L  L  N  S  F  K  T  L  S  L  M  I  L  M  M  M  T  K  T  T  M  K  S  I  L  V  T  T  I  G  M  L  K  S  A  I  A  I  I  C  *  L  L  L  Y  *  L  V  V  L  G  F  V  V  I  F  L  V  L  I  C  Y  L  *  W  F  L  P  F  L  P  K  R  R  K  E  N  G  F  A  F  Y  E  T  I  V  K  E  K  T  I  E  K  R  V  Y  F  Y  *  E  I  C  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0184E04.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="86662" stop="86246"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>414</number_coding_nucleotides>
                  <number_encoded_amino_acids>138</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VKIGDLGFATIVGKSHSAHSVLGTPEFMAPELYDEDYTELIDIYSFGMCVLEMVTLELPYSECDNVVKIYKKVISGVRPKAMDKVKDLEVKKFIEKCLAQPRVRPSASELLQDPFFNDINDDDENDDEEYTSNNYWHA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="91897" PGL_stop="93689"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="91897" e_stop="92085"/>
            <exon e_start="93287" e_stop="93689"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="91897" e_stop="92085" e_length="189"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.996">
            <gDNA_intron_boundary i_start="92086" i_stop="93286" i_length="1201"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="93287" e_stop="93689" e_length="403"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91897" stop="92085"/>
              <exon start="93287" stop="93689"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U346096" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAACTCAGAGATGGAACAAACTCCTCCGGAGGCTTCCGTCACAACGCCGCTGGATCGAACGGCGGTGCTAAGTACAAGCTCATGACTCCTGCTATGCTTCCGATCTCTAGGTCCGCCTGTATCACCATACCTCCCGGTCTCAGTCCTTCCTCCTTCCTCGAATCTCCTGTTCTCCTTTCTAACATCAAA : GCTGAGCCATCTCCGACTACAGGTTCCTTCTCCAAATTTCAAACAGTGCAAGGCTCTGGTGGGGCTGCTGCATTCTTATTGACAAGAGGTTATGCTAGTGGCAATACATACACTGAAAGAAAAGCAAGCTGCTTTGAATACAAATATGCCGGTGGATCTAGTTCTACATCAGGATCATTAGCAACTGAACATGTGGTAATGCTCTATTAGAAAATATTATTGATGTTGGATTAGAAACAAAAAGCAAATGAAACAAGAGCTTTTTTATTAGCAGTAGCCCTCTTTAACAACTGACTGATGTTTAATTTAGAAAAAATGAAAGTTTAACTCTGAGGTTCAGGTTCCTGTTCTTGTGTCTTTCTCTTGATATGGCATCTATTTGAGGTTAATGTCAAATGTGTGC</gDNA_template>
            <first_frame> Q  L  R  D  G  T  N  S  S  G  G  F  R  H  N  A  A  G  S  N  G  G  A  K  Y  K  L  M  T  P  A  M  L  P  I  S  R  S  A  C  I  T  I  P  P  G  L  S  P  S  S  F  L  E  S  P  V  L  L  S  N  I  K  :  A  E  P  S  P  T  T  G  S  F  S  K  F  Q  T  V  Q  G  S  G  G  A  A  A  F  L  L  T  R  G  Y  A  S  G  N  T  Y  T  E  R  K  A  S  C  F  E  Y  K  Y  A  G  G  S  S  S  T  S  G  S  L  A  T  E  H  V  V  M  L  Y  *  K  I  L  L  M  L  D  *  K  Q  K  A  N  E  T  R  A  F  L  L  A  V  A  L  F  N  N  *  L  M  F  N  L  E  K  M  K  V  *  L  *  G  S  G  S  C  S  C  V  F  L  L  I  W  H  L  F  E  V  N  V  K  C  V  </first_frame>
            <second_frame>  N  S  E  M  E  Q  T  P  P  E  A  S  V  T  T  P  L  D  R  T  A  V  L  S  T  S  S  *  L  L  L  C  F  R  S  L  G  P  P  V  S  P  Y  L  P  V  S  V  L  P  P  S  S  N  L  L  F  S  F  L  T  S  K :   L  S  H  L  R  L  Q  V  P  S  P  N  F  K  Q  C  K  A  L  V  G  L  L  H  S  Y  *  Q  E  V  M  L  V  A  I  H  T  L  K  E  K  Q  A  A  L  N  T  N  M  P  V  D  L  V  L  H  Q  D  H  *  Q  L  N  M  W  *  C  S  I  R  K  Y  Y  *  C  W  I  R  N  K  K  Q  M  K  Q  E  L  F  Y  *  Q  *  P  S  L  T  T  D  *  C  L  I  *  K  K  *  K  F  N  S  E  V  Q  V  P  V  L  V  S  F  S  *  Y  G  I  Y  L  R  L  M  S  N  V  C </second_frame>
            <third_frame>   T  Q  R  W  N  K  L  L  R  R  L  P  S  Q  R  R  W  I  E  R  R  C  *  V  Q  A  H  D  S  C  Y  A  S  D  L  *  V  R  L  Y  H  H  T  S  R  S  Q  S  F  L  L  P  R  I  S  C  S  P  F  *  H  Q   : S  *  A  I  S  D  Y  R  F  L  L  Q  I  S  N  S  A  R  L  W  W  G  C  C  I  L  I  D  K  R  L  C  *  W  Q  Y  I  H  *  K  K  S  K  L  L  *  I  Q  I  C  R  W  I  *  F  Y  I  R  I  I  S  N  *  T  C  G  N  A  L  L  E  N  I  I  D  V  G  L  E  T  K  S  K  *  N  K  S  F  F  I  S  S  S  P  L  *  Q  L  T  D  V  *  F  R  K  N  E  S  L  T  L  R  F  R  F  L  F  L  C  L  S  L  D  M  A  S  I  *  G  *  C  Q  M  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0184E04.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="91897" stop="92085"/>
                    <exon start="93287" stop="93496"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>396</number_coding_nucleotides>
                  <number_encoded_amino_acids>132</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QLRDGTNSSGGFRHNAAGSNGGAKYKLMTPAMLPISRSACITIPPGLSPSSFLESPVLLSNIKAEPSPTTGSFSKFQTVQGSGGAAAFLLTRGYASGNTYTERKASCFEYKYAGGSSSTSGSLATEHVVMLY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="95286" PGL_stop="96781"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="95286" e_stop="95414"/>
            <exon e_start="95484" e_stop="95639"/>
            <exon e_start="96138" e_stop="96781"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.993" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="95286" e_stop="95414" e_length="129"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.995">
            <gDNA_intron_boundary i_start="95415" i_stop="95483" i_length="69"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="95484" e_stop="95639" e_length="156"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.993">
            <gDNA_intron_boundary i_start="95640" i_stop="96137" i_length="498"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="96138" e_stop="96781" e_length="644"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95286" stop="95414"/>
              <exon start="95484" stop="95639"/>
              <exon start="96138" stop="96454"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U321709" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95333" stop="95414"/>
              <exon start="95484" stop="95639"/>
              <exon start="96138" stop="96781"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U337438" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAAAACTGAGCCTAGTAGTACTCCCGTATCACCTCAGCAAGCGGACACTGATGGTCTTGAAGGAGCAGGGTCACAGATGCATGGCACTAATGATGATATGGATGAGGATGATCAATTTGCGAAAAGAAG : GAAAATGGATGGTGGGATGGATATAACACCAGTGATTAAGCCTATCCGTGAACCACGCGTTGTTGTTCAAACAGTCAGTGAAGTTGATATATTGGATGATGGGTACAAGTGGCGCAAATATGGACAGAAGGTGGTCCGAGGCAATCCTAATCCTAG : GAGCTATTACAAGTGCACCAATGCTGGATGCCCTGTCAGGAAACATGTGGAGAGGGCTTCTCATGATCCAAAAGCTGTTATCACCACATATGAAGGAAAACATAACCACGATGTACCCGCTGCAAAAAATAATAACCATGAAATGACAGGATCCTCGCCTGTAACCGGCAGTTCAAGGATCAGGGCAGGAGAGACCAACTCACTTAGTCTGGATCTAGGCGTTAGTACTGGATATCGTCTTGATAATGGGAACAACGGGCAACTTCACACCCTCCATCACCAAGTTCAAGTTTCACGTTCTGGTATGATGCTAGTACAGCCAGCTGCAGTTGCAGCGCGCTATGGTATTGTACATGGTGGTATGAGCCGATTTGGAGCTATAGATAATCGTGTTCAAGGACCTAGTTTTGAAACTTTGCCTTTACAACCTTCTACTCAGTCTCTCCAAAACTATGGAAAGATACTTCTTGGCCCGTGAATCGTATCTACCATCAACTATAAGAGCTTAACAATAAGAAGCCACCATCTATATTTTTTCCTGCATCTTGGTGGATTACAAAGATATCTCTAGTTGAAGTATAAATACTTCTAGGACTCGTCGCGTGATGCTGTATAATACACCTTCACCTAGTGTTCTTTGTGTA</gDNA_template>
            <first_frame> *  N  *  A  *  *  Y  S  R  I  T  S  A  S  G  H  *  W  S  *  R  S  R  V  T  D  A  W  H  *  *  *  Y  G  *  G  *  S  I  C  E  K  K  :  E  N  G  W  W  D  G  Y  N  T  S  D  *  A  Y  P  *  T  T  R  C  C  S  N  S  Q  *  S  *  Y  I  G  *  W  V  Q  V  A  Q  I  W  T  E  G  G  P  R  Q  S  *  S  *  :  E  L  L  Q  V  H  Q  C  W  M  P  C  Q  E  T  C  G  E  G  F  S  *  S  K  S  C  Y  H  H  I  *  R  K  T  *  P  R  C  T  R  C  K  K  *  *  P  *  N  D  R  I  L  A  C  N  R  Q  F  K  D  Q  G  R  R  D  Q  L  T  *  S  G  S  R  R  *  Y  W  I  S  S  *  *  W  E  Q  R  A  T  S  H  P  P  S  P  S  S  S  F  T  F  W  Y  D  A  S  T  A  S  C  S  C  S  A  L  W  Y  C  T  W  W  Y  E  P  I  W  S  Y  R  *  S  C  S  R  T  *  F  *  N  F  A  F  T  T  F  Y  S  V  S  P  K  L  W  K  D  T  S  W  P  V  N  R  I  Y  H  Q  L  *  E  L  N  N  K  K  P  P  S  I  F  F  P  A  S  W  W  I  T  K  I  S  L  V  E  V  *  I  L  L  G  L  V  A  *  C  C  I  I  H  L  H  L  V  F  F  V   </first_frame>
            <second_frame>  K  T  E  P  S  S  T  P  V  S  P  Q  Q  A  D  T  D  G  L  E  G  A  G  S  Q  M  H  G  T  N  D  D  M  D  E  D  D  Q  F  A  K  R  R :   K  M  D  G  G  M  D  I  T  P  V  I  K  P  I  R  E  P  R  V  V  V  Q  T  V  S  E  V  D  I  L  D  D  G  Y  K  W  R  K  Y  G  Q  K  V  V  R  G  N  P  N  P  R :   S  Y  Y  K  C  T  N  A  G  C  P  V  R  K  H  V  E  R  A  S  H  D  P  K  A  V  I  T  T  Y  E  G  K  H  N  H  D  V  P  A  A  K  N  N  N  H  E  M  T  G  S  S  P  V  T  G  S  S  R  I  R  A  G  E  T  N  S  L  S  L  D  L  G  V  S  T  G  Y  R  L  D  N  G  N  N  G  Q  L  H  T  L  H  H  Q  V  Q  V  S  R  S  G  M  M  L  V  Q  P  A  A  V  A  A  R  Y  G  I  V  H  G  G  M  S  R  F  G  A  I  D  N  R  V  Q  G  P  S  F  E  T  L  P  L  Q  P  S  T  Q  S  L  Q  N  Y  G  K  I  L  L  G  P  *  I  V  S  T  I  N  Y  K  S  L  T  I  R  S  H  H  L  Y  F  F  L  H  L  G  G  L  Q  R  Y  L  *  L  K  Y  K  Y  F  *  D  S  S  R  D  A  V  *  Y  T  F  T  *  C  S  L  C  </second_frame>
            <third_frame>   K  L  S  L  V  V  L  P  Y  H  L  S  K  R  T  L  M  V  L  K  E  Q  G  H  R  C  M  A  L  M  M  I  W  M  R  M  I  N  L  R  K  E   : G  K  W  M  V  G  W  I  *  H  Q  *  L  S  L  S  V  N  H  A  L  L  F  K  Q  S  V  K  L  I  Y  W  M  M  G  T  S  G  A  N  M  D  R  R  W  S  E  A  I  L  I  L   : G  A  I  T  S  A  P  M  L  D  A  L  S  G  N  M  W  R  G  L  L  M  I  Q  K  L  L  S  P  H  M  K  E  N  I  T  T  M  Y  P  L  Q  K  I  I  T  M  K  *  Q  D  P  R  L  *  P  A  V  Q  G  S  G  Q  E  R  P  T  H  L  V  W  I  *  A  L  V  L  D  I  V  L  I  M  G  T  T  G  N  F  T  P  S  I  T  K  F  K  F  H  V  L  V  *  C  *  Y  S  Q  L  Q  L  Q  R  A  M  V  L  Y  M  V  V  *  A  D  L  E  L  *  I  I  V  F  K  D  L  V  L  K  L  C  L  Y  N  L  L  L  S  L  S  K  T  M  E  R  Y  F  L  A  R  E  S  Y  L  P  S  T  I  R  A  *  Q  *  E  A  T  I  Y  I  F  S  C  I  L  V  D  Y  K  D  I  S  S  *  S  I  N  T  S  R  T  R  R  V  M  L  Y  N  T  P  S  P  S  V  L  C  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0184E04.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="95287" stop="95414"/>
                    <exon start="95484" stop="95639"/>
                    <exon start="96138" stop="96615"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>759</number_coding_nucleotides>
                  <number_encoded_amino_acids>253</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KTEPSSTPVSPQQADTDGLEGAGSQMHGTNDDMDEDDQFAKRRKMDGGMDITPVIKPIREPRVVVQTVSEVDILDDGYKWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPAAKNNNHEMTGSSPVTGSSRIRAGETNSLSLDLGVSTGYRLDNGNNGQLHTLHHQVQVSRSGMMLVQPAAVAARYGIVHGGMSRFGAIDNRVQGPSFETLPLQPSTQSLQNYGKILLGP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="100438" PGL_stop="97014"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="100438" e_stop="100264"/>
            <exon e_start="99020" e_stop="97014"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.991" acc_prob="0.934" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="100438" e_stop="100264" e_length="175"/>
          </exon>
          <intron i_serial="1" don_prob="0.991" acc_prob="0.934">
            <gDNA_intron_boundary i_start="100263" i_stop="99021" i_length="1243"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="99020" e_stop="97014" e_length="2007"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100438" stop="100264"/>
              <exon start="99020" stop="98306"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U330037" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98356" stop="97654"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U323726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97726" stop="97014"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U329500" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGAAAATGAAGTTTGATTTTTTTTTTCTCTGACTTTCTTTTTAGTATTTTCTTCACCACTAGTGGCTTACTAAAAATGGAATATGCGTTGTCTAAAGTTAAGCTTTTTTTCTCTGATTATTTCATTAACCATGTTCTTCAATCTTTTTGCTTAAGATTTCTTCTCTGAGTATCAG : GATAGTTGGATCTTTGAAATGTGTTATGGATGTGAATGTTAAAGCTTGGAGCTGGTGAACTTTTTGTAACGAGGCGGGGTGTATGCTGGAAATGTTTCTGTTGTCTTCTGGATATCTATGATGTGCTAAACGGTTAGATAATATTTCACGATGAGGCCTTCTCAGAACCCTGAGGAAATCAACGAGTTCAACAAATTCTATAACCAACCCATAGAGTATCAAGAATCCTATTTCCTGCCTTCCGTTAACAATCCGAACAACAACCAATCGTTCTATGCTGATGTCTCTGCCTTAAAACCCGCCCAACACTGTTATGTTGAATCATCCGCGGGAAATTCTAGTGAACTTGTTTCTGATTCACCTCCTATTGTTAATTTCAACCCCATGATGAACCAAGGTTCTGATTCGTGTCGTTCAGACATGCATCATTCTCCTGATGATACATTTCAGTCGTCGGGTAACAGTTCGTGCTACACTAGTGATGTTACTGACCTGAAGCACAAGTTAAGGGAACTTGAAACTGCAATGCTGGGGCCAGATTCAGAAAGCTTGGAATCATTTAATAATACTATCCCTGTGACTGCAGCCAATCAAGTTCCATCAGAGTCGGATAAATTGGTTGGAATGATGGAGATGATGCCTAGCGGAGACTTGAAAGAAGTTCTAATTGCTTGTGCTAAAGCAATAGCGGAGAATAATTTGATCACAGCTGAATGGTTAATGTCAGAACTACGCACGGTGGTATCTGTTTGTGGGTCTCCCATACAACGTTTAGGTGCTTATATGCTGGAAGGTTTAGTTGCTAGATTGGCCTCCTCGGGAAGCTCCATCTACAAGGCCTTAAGGTGCAAAGAGCCTACTAGTGTCGAGCTATTCTCGTACATGCACTTGCTTTATGAAATCTGTCCATACTTCAAGTTTGGATATTTGTCAGCAAATGGTGCAATTGTTGATGCCATGAAAGATGAGAACTCAATTCATATAATCGATTTCCAGATTGCTCAGGGTAGCCAGTGGATCACCTTAATCCATGCTCTTGCAGCACGGCCTGGTGGACCTCCAAGAATCCGCATCACAGGGATTGATGACTCTACATCAGCTTACGCCAGAGGAGGAGGGATTGAAATCGTAGGTCGAAGACTGTCAAGCATTGCTGCATCTTGCAATGTACCTTTCGAATTTCATCCCGTGTCTGCTTCTTGTCCAGATATTGAGATTGAGCATCTTAAGGTTCTTCCCGGGGAACCATTGGCTGTTAACTTTGCGCTCGTCTTGCACCATATGCCTGATGAGAGCGTTGGAACTCAAAATCACAGAGACAGACTTCTGAGGATGGTTAAAAGCTTATCTCCCAAGATTGTTACCTTAGTGGAGCAAGAGTCCAACACTAACACAGCCCAATTCTTCCCCAGGTTCTTGGAGACACTGAACTACTACCTATCTGTTTTCGAATCAATAGACGTGGCTCTACCTAGAGACCATAAGGAACGAATCAACGTTGAGCAACACTGCTTAGCCCGTGAAATTGTCAACATATTAGCATGTGAAGGGGCAGAGAGAGTGGAACGACACGAGCTGCTTGAAAGGTGGAGATCACGATTTGCTGTGGCCGGGTTTAAACCATATCCGTTAAGCTCCTCAGTAAATGCTACTATCAAGACCCTGCTGGAGAATTACTACCAAAGTTATACGCTTAATGAGAGAAATGGCGCGCTCTATCTTGGCTGGATGAATCGAGATTTAGTTGCTTCTTGTGCATGGAAATAATCTCTTATCGGAAACAGTCTCTCTATCCTGCAAAGGTAGAGGTAAAGTCTGTGTAGATCCTACCTACCGTAATTAGGTGCATGTAACTTGTAGCTTGATAATGGTGAGACAGATAGTGGCACCTCTTCTTTTTTCTGTTTGTATTAATTTAAAAAGACAGGTCATTTAATCTTGCTAGGATCTGTTCTATCAGAAACTAATCGAAGTCTTTTTTATCTCTCACATTGTTCATGTTCATAG</gDNA_template>
            <first_frame> *  K  *  S  L  I  F  F  F  S  D  F  L  F  S  I  F  F  T  T  S  G  L  L  K  M  E  Y  A  L  S  K  V  K  L  F  F  S  D  Y  F  I  N  H  V  L  Q  S  F  C  L  R  F  L  L  *  V  S   : G  *  L  D  L  *  N  V  L  W  M  *  M  L  K  L  G  A  G  E  L  F  V  T  R  R  G  V  C  W  K  C  F  C  C  L  L  D  I  Y  D  V  L  N  G  *  I  I  F  H  D  E  A  F  S  E  P  *  G  N  Q  R  V  Q  Q  I  L  *  P  T  H  R  V  S  R  I  L  F  P  A  F  R  *  Q  S  E  Q  Q  P  I  V  L  C  *  C  L  C  L  K  T  R  P  T  L  L  C  *  I  I  R  G  K  F  *  *  T  C  F  *  F  T  S  Y  C  *  F  Q  P  H  D  E  P  R  F  *  F  V  S  F  R  H  A  S  F  S  *  *  Y  I  S  V  V  G  *  Q  F  V  L  H  *  *  C  Y  *  P  E  A  Q  V  K  G  T  *  N  C  N  A  G  A  R  F  R  K  L  G  I  I  *  *  Y  Y  P  C  D  C  S  Q  S  S  S  I  R  V  G  *  I  G  W  N  D  G  D  D  A  *  R  R  L  E  R  S  S  N  C  L  C  *  S  N  S  G  E  *  F  D  H  S  *  M  V  N  V  R  T  T  H  G  G  I  C  L  W  V  S  H  T  T  F  R  C  L  Y  A  G  R  F  S  C  *  I  G  L  L  G  K  L  H  L  Q  G  L  K  V  Q  R  A  Y  *  C  R  A  I  L  V  H  A  L  A  L  *  N  L  S  I  L  Q  V  W  I  F  V  S  K  W  C  N  C  *  C  H  E  R  *  E  L  N  S  Y  N  R  F  P  D  C  S  G  *  P  V  D  H  L  N  P  C  S  C  S  T  A  W  W  T  S  K  N  P  H  H  R  D  *  *  L  Y  I  S  L  R  Q  R  R  R  D  *  N  R  R  S  K  T  V  K  H  C  C  I  L  Q  C  T  F  R  I  S  S  R  V  C  F  L  S  R  Y  *  D  *  A  S  *  G  S  S  R  G  T  I  G  C  *  L  C  A  R  L  A  P  Y  A  *  *  E  R  W  N  S  K  S  Q  R  Q  T  S  E  D  G  *  K  L  I  S  Q  D  C  Y  L  S  G  A  R  V  Q  H  *  H  S  P  I  L  P  Q  V  L  G  D  T  E  L  L  P  I  C  F  R  I  N  R  R  G  S  T  *  R  P  *  G  T  N  Q  R  *  A  T  L  L  S  P  *  N  C  Q  H  I  S  M  *  R  G  R  E  S  G  T  T  R  A  A  *  K  V  E  I  T  I  C  C  G  R  V  *  T  I  S  V  K  L  L  S  K  C  Y  Y  Q  D  P  A  G  E  L  L  P  K  L  Y  A  *  *  E  K  W  R  A  L  S  W  L  D  E  S  R  F  S  C  F  L  C  M  E  I  I  S  Y  R  K  Q  S  L  Y  P  A  K  V  E  V  K  S  V  *  I  L  P  T  V  I  R  C  M  *  L  V  A  *  *  W  *  D  R  *  W  H  L  F  F  F  L  F  V  L  I  *  K  D  R  S  F  N  L  A  R  I  C  S  I  R  N  *  S  K  S  F  L  S  L  T  L  F  M  F  I  </first_frame>
            <second_frame>  E  N  E  V  *  F  F  F  S  L  T  F  F  L  V  F  S  S  P  L  V  A  Y  *  K  W  N  M  R  C  L  K  L  S  F  F  S  L  I  I  S  L  T  M  F  F  N  L  F  A  *  D  F  F  S  E  Y  Q  :  D  S  W  I  F  E  M  C  Y  G  C  E  C  *  S  L  E  L  V  N  F  L  *  R  G  G  V  Y  A  G  N  V  S  V  V  F  W  I  S  M  M  C  *  T  V  R  *  Y  F  T  M  R  P  S  Q  N  P  E  E  I  N  E  F  N  K  F  Y  N  Q  P  I  E  Y  Q  E  S  Y  F  L  P  S  V  N  N  P  N  N  N  Q  S  F  Y  A  D  V  S  A  L  K  P  A  Q  H  C  Y  V  E  S  S  A  G  N  S  S  E  L  V  S  D  S  P  P  I  V  N  F  N  P  M  M  N  Q  G  S  D  S  C  R  S  D  M  H  H  S  P  D  D  T  F  Q  S  S  G  N  S  S  C  Y  T  S  D  V  T  D  L  K  H  K  L  R  E  L  E  T  A  M  L  G  P  D  S  E  S  L  E  S  F  N  N  T  I  P  V  T  A  A  N  Q  V  P  S  E  S  D  K  L  V  G  M  M  E  M  M  P  S  G  D  L  K  E  V  L  I  A  C  A  K  A  I  A  E  N  N  L  I  T  A  E  W  L  M  S  E  L  R  T  V  V  S  V  C  G  S  P  I  Q  R  L  G  A  Y  M  L  E  G  L  V  A  R  L  A  S  S  G  S  S  I  Y  K  A  L  R  C  K  E  P  T  S  V  E  L  F  S  Y  M  H  L  L  Y  E  I  C  P  Y  F  K  F  G  Y  L  S  A  N  G  A  I  V  D  A  M  K  D  E  N  S  I  H  I  I  D  F  Q  I  A  Q  G  S  Q  W  I  T  L  I  H  A  L  A  A  R  P  G  G  P  P  R  I  R  I  T  G  I  D  D  S  T  S  A  Y  A  R  G  G  G  I  E  I  V  G  R  R  L  S  S  I  A  A  S  C  N  V  P  F  E  F  H  P  V  S  A  S  C  P  D  I  E  I  E  H  L  K  V  L  P  G  E  P  L  A  V  N  F  A  L  V  L  H  H  M  P  D  E  S  V  G  T  Q  N  H  R  D  R  L  L  R  M  V  K  S  L  S  P  K  I  V  T  L  V  E  Q  E  S  N  T  N  T  A  Q  F  F  P  R  F  L  E  T  L  N  Y  Y  L  S  V  F  E  S  I  D  V  A  L  P  R  D  H  K  E  R  I  N  V  E  Q  H  C  L  A  R  E  I  V  N  I  L  A  C  E  G  A  E  R  V  E  R  H  E  L  L  E  R  W  R  S  R  F  A  V  A  G  F  K  P  Y  P  L  S  S  S  V  N  A  T  I  K  T  L  L  E  N  Y  Y  Q  S  Y  T  L  N  E  R  N  G  A  L  Y  L  G  W  M  N  R  D  L  V  A  S  C  A  W  K  *  S  L  I  G  N  S  L  S  I  L  Q  R  *  R  *  S  L  C  R  S  Y  L  P  *  L  G  A  C  N  L  *  L  D  N  G  E  T  D  S  G  T  S  S  F  F  C  L  Y  *  F  K  K  T  G  H  L  I  L  L  G  S  V  L  S  E  T  N  R  S  L  F  Y  L  S  H  C  S  C  S  * </second_frame>
            <third_frame>   K  M  K  F  D  F  F  F  L  *  L  S  F  *  Y  F  L  H  H  *  W  L  T  K  N  G  I  C  V  V  *  S  *  A  F  F  L  *  L  F  H  *  P  C  S  S  I  F  L  L  K  I  S  S  L  S  I  R :   I  V  G  S  L  K  C  V  M  D  V  N  V  K  A  W  S  W  *  T  F  C  N  E  A  G  C  M  L  E  M  F  L  L  S  S  G  Y  L  *  C  A  K  R  L  D  N  I  S  R  *  G  L  L  R  T  L  R  K  S  T  S  S  T  N  S  I  T  N  P  *  S  I  K  N  P  I  S  C  L  P  L  T  I  R  T  T  T  N  R  S  M  L  M  S  L  P  *  N  P  P  N  T  V  M  L  N  H  P  R  E  I  L  V  N  L  F  L  I  H  L  L  L  L  I  S  T  P  *  *  T  K  V  L  I  R  V  V  Q  T  C  I  I  L  L  M  I  H  F  S  R  R  V  T  V  R  A  T  L  V  M  L  L  T  *  S  T  S  *  G  N  L  K  L  Q  C  W  G  Q  I  Q  K  A  W  N  H  L  I  I  L  S  L  *  L  Q  P  I  K  F  H  Q  S  R  I  N  W  L  E  *  W  R  *  C  L  A  E  T  *  K  K  F  *  L  L  V  L  K  Q  *  R  R  I  I  *  S  Q  L  N  G  *  C  Q  N  Y  A  R  W  Y  L  F  V  G  L  P  Y  N  V  *  V  L  I  C  W  K  V  *  L  L  D  W  P  P  R  E  A  P  S  T  R  P  *  G  A  K  S  L  L  V  S  S  Y  S  R  T  C  T  C  F  M  K  S  V  H  T  S  S  L  D  I  C  Q  Q  M  V  Q  L  L  M  P  *  K  M  R  T  Q  F  I  *  S  I  S  R  L  L  R  V  A  S  G  S  P  *  S  M  L  L  Q  H  G  L  V  D  L  Q  E  S  A  S  Q  G  L  M  T  L  H  Q  L  T  P  E  E  E  G  L  K  S  *  V  E  D  C  Q  A  L  L  H  L  A  M  Y  L  S  N  F  I  P  C  L  L  L  V  Q  I  L  R  L  S  I  L  R  F  F  P  G  N  H  W  L  L  T  L  R  S  S  C  T  I  C  L  M  R  A  L  E  L  K  I  T  E  T  D  F  *  G  W  L  K  A  Y  L  P  R  L  L  P  *  W  S  K  S  P  T  L  T  Q  P  N  S  S  P  G  S  W  R  H  *  T  T  T  Y  L  F  S  N  Q  *  T  W  L  Y  L  E  T  I  R  N  E  S  T  L  S  N  T  A  *  P  V  K  L  S  T  Y  *  H  V  K  G  Q  R  E  W  N  D  T  S  C  L  K  G  G  D  H  D  L  L  W  P  G  L  N  H  I  R  *  A  P  Q  *  M  L  L  S  R  P  C  W  R  I  T  T  K  V  I  R  L  M  R  E  M  A  R  S  I  L  A  G  *  I  E  I  *  L  L  L  V  H  G  N  N  L  L  S  E  T  V  S  L  S  C  K  G  R  G  K  V  C  V  D  P  T  Y  R  N  *  V  H  V  T  C  S  L  I  M  V  R  Q  I  V  A  P  L  L  F  S  V  C  I  N  L  K  R  Q  V  I  *  S  C  *  D  L  F  Y  Q  K  L  I  E  V  F  F  I  S  H  I  V  H  V  H   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0184E04.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="98879" stop="97254"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1623</number_coding_nucleotides>
                  <number_encoded_amino_acids>541</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YFTMRPSQNPEEINEFNKFYNQPIEYQESYFLPSVNNPNNNQSFYADVSALKPAQHCYVESSAGNSSELVSDSPPIVNFNPMMNQGSDSCRSDMHHSPDDTFQSSGNSSCYTSDVTDLKHKLRELETAMLGPDSESLESFNNTIPVTAANQVPSESDKLVGMMEMMPSGDLKEVLIACAKAIAENNLITAEWLMSELRTVVSVCGSPIQRLGAYMLEGLVARLASSGSSIYKALRCKEPTSVELFSYMHLLYEICPYFKFGYLSANGAIVDAMKDENSIHIIDFQIAQGSQWITLIHALAARPGGPPRIRITGIDDSTSAYARGGGIEIVGRRLSSIAASCNVPFEFHPVSASCPDIEIEHLKVLPGEPLAVNFALVLHHMPDESVGTQNHRDRLLRMVKSLSPKIVTLVEQESNTNTAQFFPRFLETLNYYLSVFESIDVALPRDHKERINVEQHCLAREIVNILACEGAERVERHELLERWRSRFAVAGFKPYPLSSSVNATIKTLLENYYQSYTLNERNGALYLGWMNRDLVASCAWK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="104939" PGL_stop="103531"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="104939" e_stop="104683"/>
            <exon e_start="104190" e_stop="103757"/>
            <exon e_start="103605" e_stop="103531"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.995" e_score="0.968"/>
          <exon-only e_score="0.413"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="104939" e_stop="104683" e_length="257"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="104682" i_stop="104191" i_length="492"/>
          </intron>
          <exon e_serial="2" e_score="0.968">
            <gDNA_exon_boundary e_start="104190" e_stop="103757" e_length="434"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.995">
            <gDNA_intron_boundary i_start="103756" i_stop="103606" i_length="151"/>
          </intron>
          <exon e_serial="3" e_score="0.413">
            <gDNA_exon_boundary e_start="103605" e_stop="103531" e_length="75"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104939" stop="104683"/>
              <exon start="104190" stop="103757"/>
              <exon start="103605" stop="103531"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U320871" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGGAACAAATACAGAGACTGAACTTTGCATTTTCCGATCGTAAAATTCAACTGGAGTATCCGCCGCCGGCAAGTGACCAGAAGAAGAGCAGCTAAGAAGGAAGATGAATACTGATATCACAGCATCGGCAAAGCCCGAGTATCCAGTTGTAGATCGAAACCCACCGTTTACTAAAACCGTCGGTAATTTCAACACACTCGATTACCTCCGGCTCACCACCATCACCGGGATTTCTGTCACCGTCGGATACCTCTCCG : GAATAAAGCCAGGGATTAGAGGGCCATCGATGGTTACCGGAGGTTTGATTGGGCTAATGGGTGGTTTCATGTATGCTTATCAGAATTCAGCTGGCAGGCTCATGGGTTTCTTCCCAAATGAAGGAGAGGTAGCCAAAGCCAAGTACAAGATTTAACTGCTTCCCTTAATTTTCTGGTTCTTTTGGATTCCCTTTTGTAGTTTCCCCAAGATGTTATTAAAACAGTGGGCATTCTCTCTTCTCATGAGAACTTTGTTGAAAGTAATACCATTAATAATCAGTCTCTGGTTACCAACTTAATATGATTTCTTGTGTTGCGATGAATCATGTATTATTGTTACTTGCTAATAATGATGTGTTGACTATGCATTATTTAGTATGATAATGTTTTGAAATCAGCTTAAATGAGAGAATTGAGATTTATGTAGCCAACAT : TGTTGTGAATGGCGAGCGAAAATCGAAAAGCATATATATCTGTACCTAGACACTAGAACAGCGAAAAACAATCCA</gDNA_template>
            <first_frame> R  N  K  Y  R  D  *  T  L  H  F  P  I  V  K  F  N  W  S  I  R  R  R  Q  V  T  R  R  R  A  A  K  K  E  D  E  Y  *  Y  H  S  I  G  K  A  R  V  S  S  C  R  S  K  P  T  V  Y  *  N  R  R  *  F  Q  H  T  R  L  P  P  A  H  H  H  H  R  D  F  C  H  R  R  I  P  L  R :   N  K  A  R  D  *  R  A  I  D  G  Y  R  R  F  D  W  A  N  G  W  F  H  V  C  L  S  E  F  S  W  Q  A  H  G  F  L  P  K  *  R  R  G  S  Q  S  Q  V  Q  D  L  T  A  S  L  N  F  L  V  L  L  D  S  L  L  *  F  P  Q  D  V  I  K  T  V  G  I  L  S  S  H  E  N  F  V  E  S  N  T  I  N  N  Q  S  L  V  T  N  L  I  *  F  L  V  L  R  *  I  M  Y  Y  C  Y  L  L  I  M  M  C  *  L  C  I  I  *  Y  D  N  V  L  K  S  A  *  M  R  E  L  R  F  M  *  P  T   : L  L  *  M  A  S  E  N  R  K  A  Y  I  S  V  P  R  H  *  N  S  E  K  Q  S  </first_frame>
            <second_frame>  G  T  N  T  E  T  E  L  C  I  F  R  S  *  N  S  T  G  V  S  A  A  G  K  *  P  E  E  E  Q  L  R  R  K  M  N  T  D  I  T  A  S  A  K  P  E  Y  P  V  V  D  R  N  P  P  F  T  K  T  V  G  N  F  N  T  L  D  Y  L  R  L  T  T  I  T  G  I  S  V  T  V  G  Y  L  S   : G  I  K  P  G  I  R  G  P  S  M  V  T  G  G  L  I  G  L  M  G  G  F  M  Y  A  Y  Q  N  S  A  G  R  L  M  G  F  F  P  N  E  G  E  V  A  K  A  K  Y  K  I  *  L  L  P  L  I  F  W  F  F  W  I  P  F  C  S  F  P  K  M  L  L  K  Q  W  A  F  S  L  L  M  R  T  L  L  K  V  I  P  L  I  I  S  L  W  L  P  T  *  Y  D  F  L  C  C  D  E  S  C  I  I  V  T  C  *  *  *  C  V  D  Y  A  L  F  S  M  I  M  F  *  N  Q  L  K  *  E  N  *  D  L  C  S  Q  H  :  C  C  E  W  R  A  K  I  E  K  H  I  Y  L  Y  L  D  T  R  T  A  K  N  N  P </second_frame>
            <third_frame>   E  Q  I  Q  R  L  N  F  A  F  S  D  R  K  I  Q  L  E  Y  P  P  P  A  S  D  Q  K  K  S  S  *  E  G  R  *  I  L  I  S  Q  H  R  Q  S  P  S  I  Q  L  *  I  E  T  H  R  L  L  K  P  S  V  I  S  T  H  S  I  T  S  G  S  P  P  S  P  G  F  L  S  P  S  D  T  S  P  :  E  *  S  Q  G  L  E  G  H  R  W  L  P  E  V  *  L  G  *  W  V  V  S  C  M  L  I  R  I  Q  L  A  G  S  W  V  S  S  Q  M  K  E  R  *  P  K  P  S  T  R  F  N  C  F  P  *  F  S  G  S  F  G  F  P  F  V  V  S  P  R  C  Y  *  N  S  G  H  S  L  F  S  *  E  L  C  *  K  *  Y  H  *  *  S  V  S  G  Y  Q  L  N  M  I  S  C  V  A  M  N  H  V  L  L  L  L  A  N  N  D  V  L  T  M  H  Y  L  V  *  *  C  F  E  I  S  L  N  E  R  I  E  I  Y  V  A  N  I :   V  V  N  G  E  R  K  S  K  S  I  Y  I  C  T  *  T  L  E  Q  R  K  T  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0184E04.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="104863" stop="104683"/>
                    <exon start="104190" stop="104036"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>333</number_coding_nucleotides>
                  <number_encoded_amino_acids>111</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PEEEQLRRKMNTDITASAKPEYPVVDRNPPFTKTVGNFNTLDYLRLTTITGISVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVAKAKYKI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="-" PGL_start="125661" PGL_stop="121241"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="125661" e_stop="125627"/>
            <exon e_start="124535" e_stop="124454"/>
            <exon e_start="122707" e_stop="122568"/>
            <exon e_start="122480" e_stop="122402"/>
            <exon e_start="122293" e_stop="122230"/>
            <exon e_start="121760" e_stop="121669"/>
            <exon e_start="121534" e_stop="121469"/>
            <exon e_start="121320" e_stop="121241"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.575" acc_prob="0.656" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.997" e_score="0.978"/>
          <exon-intron don_prob="0.992" acc_prob="0.999" e_score="0.985"/>
          <exon-only e_score="0.925"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="125661" e_stop="125627" e_length="35"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="0.986">
            <gDNA_intron_boundary i_start="125626" i_stop="124536" i_length="1091"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="124535" e_stop="124454" e_length="82"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="124453" i_stop="122708" i_length="1746"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="122707" e_stop="122568" e_length="140"/>
          </exon>
          <intron i_serial="3" don_prob="0.575" acc_prob="0.656">
            <gDNA_intron_boundary i_start="122567" i_stop="122481" i_length="87"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="122480" e_stop="122402" e_length="79"/>
          </exon>
          <intron i_serial="4" don_prob="0.980" acc_prob="0.996">
            <gDNA_intron_boundary i_start="122401" i_stop="122294" i_length="108"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="122293" e_stop="122230" e_length="64"/>
          </exon>
          <intron i_serial="5" don_prob="0.998" acc_prob="0.000">
            <gDNA_intron_boundary i_start="122229" i_stop="121761" i_length="469"/>
          </intron>
          <exon e_serial="6" e_score="0.978">
            <gDNA_exon_boundary e_start="121760" e_stop="121669" e_length="92"/>
          </exon>
          <intron i_serial="6" don_prob="0.997" acc_prob="0.997">
            <gDNA_intron_boundary i_start="121668" i_stop="121535" i_length="134"/>
          </intron>
          <exon e_serial="7" e_score="0.985">
            <gDNA_exon_boundary e_start="121534" e_stop="121469" e_length="66"/>
          </exon>
          <intron i_serial="7" don_prob="0.992" acc_prob="0.999">
            <gDNA_intron_boundary i_start="121468" i_stop="121321" i_length="148"/>
          </intron>
          <exon e_serial="8" e_score="0.925">
            <gDNA_exon_boundary e_start="121320" e_stop="121241" e_length="80"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125661" stop="125627"/>
              <exon start="124535" stop="124454"/>
              <exon start="122707" stop="122568"/>
              <exon start="122480" stop="122402"/>
              <exon start="122293" stop="122230"/>
              <exon start="121760" stop="121669"/>
              <exon start="121534" stop="121469"/>
              <exon start="121320" stop="121241"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U331538" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGAATGCTAAAACTCCTCGGCTTGAAAGGAAGAAG : TGAACCATATGTCACTGAGGATGAATTGAAGTTGATGCTGCGTGGGGCGGAGTTAAGTGGCGCAATTGAGGAGGAAGAGCAG : GATATGATTGAAAATGTGTTGGAGATTAAAGACACTCATGTCAGGGAGGTAATGACACCTCTTGTTGATGTTGTTGCAATCGATGCCAGTGCAACGTTAGTTGATTTCCATAGTTTGTGGGTGACACATCAGTACTCCAG : GGTGCCCGTTTTTGAGCAACGTATAGATAATATTGTTGGCATTGCATATGCCATGGATCTCCTAGATTATGTACAAAAG : GGAGAACTGCTGGAAAGTTCTATTGTGGGAGACATTGCACATAAACCTGCATACTTTGTTCCCG : ATTCTATGTCAGTGTGGAACCTTCTTAGAGAGTTCCGCATCAGAAAGGTACACATGGCTGTTGTTCTTAATGAATATGGAGGAACCATTGGA : ATTGTAACCCTTGAAGATGTGGTCGAGGAAATTGTTGGCGAAATCTTTGACGAAAATGATTCAAAA : GAGGAAATCCAAGAAAAAAACTGGCTATATTGTCATGCGGGCTGAGGGAATATACGATGTTGATGCAAATACCTCCATTG</gDNA_template>
            <first_frame> G  M  L  K  L  L  G  L  K  G  R  S :   E  P  Y  V  T  E  D  E  L  K  L  M  L  R  G  A  E  L  S  G  A  I  E  E  E  E  Q  :  D  M  I  E  N  V  L  E  I  K  D  T  H  V  R  E  V  M  T  P  L  V  D  V  V  A  I  D  A  S  A  T  L  V  D  F  H  S  L  W  V  T  H  Q  Y  S  R :   V  P  V  F  E  Q  R  I  D  N  I  V  G  I  A  Y  A  M  D  L  L  D  Y  V  Q  K  :  G  E  L  L  E  S  S  I  V  G  D  I  A  H  K  P  A  Y  F  V  P   : D  S  M  S  V  W  N  L  L  R  E  F  R  I  R  K  V  H  M  A  V  V  L  N  E  Y  G  G  T  I  G  :  I  V  T  L  E  D  V  V  E  E  I  V  G  E  I  F  D  E  N  D  S  K  :  E  E  I  Q  E  K  N  W  L  Y  C  H  A  G  *  G  N  I  R  C  *  C  K  Y  L  H   </first_frame>
            <second_frame>  E  C  *  N  S  S  A  *  K  E  E   : V  N  H  M  S  L  R  M  N  *  S  *  C  C  V  G  R  S  *  V  A  Q  L  R  R  K  S  R :   I  *  L  K  M  C  W  R  L  K  T  L  M  S  G  R  *  *  H  L  L  L  M  L  L  Q  S  M  P  V  Q  R  *  L  I  S  I  V  C  G  *  H  I  S  T  P   : G  C  P  F  L  S  N  V  *  I  I  L  L  A  L  H  M  P  W  I  S  *  I  M  Y  K  R :   E  N  C  W  K  V  L  L  W  E  T  L  H  I  N  L  H  T  L  F  P  :  I  L  C  Q  C  G  T  F  L  E  S  S  A  S  E  R  Y  T  W  L  L  F  L  M  N  M  E  E  P  L  E :   L  *  P  L  K  M  W  S  R  K  L  L  A  K  S  L  T  K  M  I  Q  K :   R  K  S  K  K  K  T  G  Y  I  V  M  R  A  E  G  I  Y  D  V  D  A  N  T  S  I  </second_frame>
            <third_frame>   N  A  K  T  P  R  L  E  R  K  K  :  *  T  I  C  H  *  G  *  I  E  V  D  A  A  W  G  G  V  K  W  R  N  *  G  G  R  A   : G  Y  D  *  K  C  V  G  D  *  R  H  S  C  Q  G  G  N  D  T  S  C  *  C  C  C  N  R  C  Q  C  N  V  S  *  F  P  *  F  V  G  D  T  S  V  L  Q  :  G  A  R  F  *  A  T  Y  R  *  Y  C  W  H  C  I  C  H  G  S  P  R  L  C  T  K   : G  R  T  A  G  K  F  Y  C  G  R  H  C  T  *  T  C  I  L  C  S  R :   F  Y  V  S  V  E  P  S  *  R  V  P  H  Q  K  G  T  H  G  C  C  S  *  *  I  W  R  N  H  W   : N  C  N  P  *  R  C  G  R  G  N  C  W  R  N  L  *  R  K  *  F  K   : R  G  N  P  R  K  K  L  A  I  L  S  C  G  L  R  E  Y  T  M  L  M  Q  I  P  P  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0184E04.1" strand="-"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125661" stop="125627"/>
                    <exon start="124535" stop="124454"/>
                    <exon start="122707" stop="122568"/>
                    <exon start="122480" stop="122402"/>
                    <exon start="122293" stop="122230"/>
                    <exon start="121760" stop="121669"/>
                    <exon start="121534" stop="121469"/>
                    <exon start="121320" stop="121276"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>600</number_coding_nucleotides>
                  <number_encoded_amino_acids>200</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GMLKLLGLKGRSEPYVTEDELKLMLRGAELSGAIEEEEQDMIENVLEIKDTHVREVMTPLVDVVAIDASATLVDFHSLWVTHQYSRVPVFEQRIDNIVGIAYAMDLLDYVQKGELLESSIVGDIAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTIGIVTLEDVVEEIVGEIFDENDSKEEIQEKNWLYCHAG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="130643" PGL_stop="129097"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="130643" e_stop="130608"/>
            <exon e_start="130518" e_stop="130213"/>
            <exon e_start="130116" e_stop="130053"/>
            <exon e_start="129970" e_stop="129731"/>
            <exon e_start="129648" e_stop="129097"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.948" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.582" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="130643" e_stop="130608" e_length="36"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="130607" i_stop="130519" i_length="89"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="130518" e_stop="130213" e_length="306"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.999">
            <gDNA_intron_boundary i_start="130212" i_stop="130117" i_length="96"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="130116" e_stop="130053" e_length="64"/>
          </exon>
          <intron i_serial="3" don_prob="0.948" acc_prob="0.998">
            <gDNA_intron_boundary i_start="130052" i_stop="129971" i_length="82"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="129970" e_stop="129731" e_length="240"/>
          </exon>
          <intron i_serial="4" don_prob="0.582" acc_prob="0.998">
            <gDNA_intron_boundary i_start="129730" i_stop="129649" i_length="82"/>
          </intron>
          <exon e_serial="5" e_score="0.996">
            <gDNA_exon_boundary e_start="129648" e_stop="129097" e_length="552"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="130643" stop="130608"/>
              <exon start="130518" stop="130213"/>
              <exon start="130116" stop="130053"/>
              <exon start="129970" stop="129731"/>
              <exon start="129648" stop="129097"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U322078" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCATCTCGTGGAGAGGTTGAGTTCAACAATCTTCAG : GTCCGATATGCTCCACACATGCCTCTCGTGTTACGAGGACTTACATGCACTTTCTTTGGTGGGAAGAAGACTGGAATTGTTGGTAGGACAGGCAGTGGTAAATCAACTTTAATACAGACCCTTTTCCGCATAGTTGATCCTGTTGTTGGACAAATAAAGATAGATGGTACCAACATCTCCACAATTGGTCTGCATGATCTGCGGTCTAGATTGAGTATCATTCCGCAGGATCCGACTATGTTTGAGGGAACTGTACGCAGCAACCTAGATCCGCTCGAAGAGCATTCAGATGATCAAATTTGGGAG : GCGCTGGACAAATGTCAACTAGGAGACGAAGTTAGGAAGAAGGAAGGCAAGCTATATTCTACAG : TATCTGAGAATGGAGAGAACTGGAGCGTAGGCCAAAGGCAGCTGGTCTGTCTTGGCCGCGTGCTACTCAAAAAAAGCAAGGTCCTTGTCCTAGACGAGGCTACAGCATCTGTTGACACTGCAACTGACAATCTAATTCAGCAAACTCTGAGGCTGCACTTCACTGATTCCACTGTTATAACCATCGCTCATAGGATAACATCTGTTCTTGATAGTGACATGGTCCTACTATTAGAACACG : GGCTGATTGCTGAATATGACACTCCAGGCAAGTTATTAGAGAACGAATCCTCGTTGTTTGCCAAGCTCGTGGCTGAGTATAGTATGAGATCAAATTCAAGTTTTGAGAATGCCTCAGACACATGAATCTTTCATTGACCACGTTATACGATGATGATGATGAAAACTAGTACACATGAATCTCAGACACTAACACTCTTTTGAGTTTCCATCCGTGGACGATAGAGCTTGAACAAGAACCCGCGAAATGCAGCTCATTGCATGTGACTTGAGGGAAACTGCAACAATCTTATGGCAGTGAAAGAAGTTCATCTATTTGTGCAATATTGATAGTGAAATGGCATCTGTTTTCTTTAGACTTTTTGATGTGAAAAAATGTTTTAAGTATTTGTTTACCAATAATTTGAATGTATGTTGAGTCAATTGATTAGTTAGTTAAGAGTGCACGGATTTTGTTCCTTATTGTAAAAGTAGTAAAACTTTTTGTATTGAGTTGGAAGTGAACTTACAAGTGTTTGAATTTTTCTCTACAAGCAAAACTGAAATACTTTTA</gDNA_template>
            <first_frame> P  S  R  G  E  V  E  F  N  N  L  Q  :  V  R  Y  A  P  H  M  P  L  V  L  R  G  L  T  C  T  F  F  G  G  K  K  T  G  I  V  G  R  T  G  S  G  K  S  T  L  I  Q  T  L  F  R  I  V  D  P  V  V  G  Q  I  K  I  D  G  T  N  I  S  T  I  G  L  H  D  L  R  S  R  L  S  I  I  P  Q  D  P  T  M  F  E  G  T  V  R  S  N  L  D  P  L  E  E  H  S  D  D  Q  I  W  E  :  A  L  D  K  C  Q  L  G  D  E  V  R  K  K  E  G  K  L  Y  S  T   : V  S  E  N  G  E  N  W  S  V  G  Q  R  Q  L  V  C  L  G  R  V  L  L  K  K  S  K  V  L  V  L  D  E  A  T  A  S  V  D  T  A  T  D  N  L  I  Q  Q  T  L  R  L  H  F  T  D  S  T  V  I  T  I  A  H  R  I  T  S  V  L  D  S  D  M  V  L  L  L  E  H   : G  L  I  A  E  Y  D  T  P  G  K  L  L  E  N  E  S  S  L  F  A  K  L  V  A  E  Y  S  M  R  S  N  S  S  F  E  N  A  S  D  T  *  I  F  H  *  P  R  Y  T  M  M  M  M  K  T  S  T  H  E  S  Q  T  L  T  L  F  *  V  S  I  R  G  R  *  S  L  N  K  N  P  R  N  A  A  H  C  M  *  L  E  G  N  C  N  N  L  M  A  V  K  E  V  H  L  F  V  Q  Y  *  *  *  N  G  I  C  F  L  *  T  F  *  C  E  K  M  F  *  V  F  V  Y  Q  *  F  E  C  M  L  S  Q  L  I  S  *  L  R  V  H  G  F  C  S  L  L  *  K  *  *  N  F  L  Y  *  V  G  S  E  L  T  S  V  *  I  F  L  Y  K  Q  N  *  N  T  F  </first_frame>
            <second_frame>  H  L  V  E  R  L  S  S  T  I  F  R :   S  D  M  L  H  T  C  L  S  C  Y  E  D  L  H  A  L  S  L  V  G  R  R  L  E  L  L  V  G  Q  A  V  V  N  Q  L  *  Y  R  P  F  S  A  *  L  I  L  L  L  D  K  *  R  *  M  V  P  T  S  P  Q  L  V  C  M  I  C  G  L  D  *  V  S  F  R  R  I  R  L  C  L  R  E  L  Y  A  A  T  *  I  R  S  K  S  I  Q  M  I  K  F  G  R :   R  W  T  N  V  N  *  E  T  K  L  G  R  R  K  A  S  Y  I  L  Q  :  Y  L  R  M  E  R  T  G  A  *  A  K  G  S  W  S  V  L  A  A  C  Y  S  K  K  A  R  S  L  S  *  T  R  L  Q  H  L  L  T  L  Q  L  T  I  *  F  S  K  L  *  G  C  T  S  L  I  P  L  L  *  P  S  L  I  G  *  H  L  F  L  I  V  T  W  S  Y  Y  *  N  T  :  G  *  L  L  N  M  T  L  Q  A  S  Y  *  R  T  N  P  R  C  L  P  S  S  W  L  S  I  V  *  D  Q  I  Q  V  L  R  M  P  Q  T  H  E  S  F  I  D  H  V  I  R  *  *  *  *  K  L  V  H  M  N  L  R  H  *  H  S  F  E  F  P  S  V  D  D  R  A  *  T  R  T  R  E  M  Q  L  I  A  C  D  L  R  E  T  A  T  I  L  W  Q  *  K  K  F  I  Y  L  C  N  I  D  S  E  M  A  S  V  F  F  R  L  F  D  V  K  K  C  F  K  Y  L  F  T  N  N  L  N  V  C  *  V  N  *  L  V  S  *  E  C  T  D  F  V  P  Y  C  K  S  S  K  T  F  C  I  E  L  E  V  N  L  Q  V  F  E  F  F  S  T  S  K  T  E  I  L  L </second_frame>
            <third_frame>   I  S  W  R  G  *  V  Q  Q  S  S   : G  P  I  C  S  T  H  A  S  R  V  T  R  T  Y  M  H  F  L  W  W  E  E  D  W  N  C  W  *  D  R  Q  W  *  I  N  F  N  T  D  P  F  P  H  S  *  S  C  C  W  T  N  K  D  R  W  Y  Q  H  L  H  N  W  S  A  *  S  A  V  *  I  E  Y  H  S  A  G  S  D  Y  V  *  G  N  C  T  Q  Q  P  R  S  A  R  R  A  F  R  *  S  N  L  G   : G  A  G  Q  M  S  T  R  R  R  S  *  E  E  G  R  Q  A  I  F  Y  S :   I  *  E  W  R  E  L  E  R  R  P  K  A  A  G  L  S  W  P  R  A  T  Q  K  K  Q  G  P  C  P  R  R  G  Y  S  I  C  *  H  C  N  *  Q  S  N  S  A  N  S  E  A  A  L  H  *  F  H  C  Y  N  H  R  S  *  D  N  I  C  S  *  *  *  H  G  P  T  I  R  T  R :   A  D  C  *  I  *  H  S  R  Q  V  I  R  E  R  I  L  V  V  C  Q  A  R  G  *  V  *  Y  E  I  K  F  K  F  *  E  C  L  R  H  M  N  L  S  L  T  T  L  Y  D  D  D  D  E  N  *  Y  T  *  I  S  D  T  N  T  L  L  S  F  H  P  W  T  I  E  L  E  Q  E  P  A  K  C  S  S  L  H  V  T  *  G  K  L  Q  Q  S  Y  G  S  E  R  S  S  S  I  C  A  I  L  I  V  K  W  H  L  F  S  L  D  F  L  M  *  K  N  V  L  S  I  C  L  P  I  I  *  M  Y  V  E  S  I  D  *  L  V  K  S  A  R  I  L  F  L  I  V  K  V  V  K  L  F  V  L  S  W  K  *  T  Y  K  C  L  N  F  S  L  Q  A  K  L  K  Y  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0184E04.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="130643" stop="130608"/>
                    <exon start="130518" stop="130213"/>
                    <exon start="130116" stop="130053"/>
                    <exon start="129970" stop="129731"/>
                    <exon start="129648" stop="129524"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>768</number_coding_nucleotides>
                  <number_encoded_amino_acids>256</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PSRGEVEFNNLQVRYAPHMPLVLRGLTCTFFGGKKTGIVGRTGSGKSTLIQTLFRIVDPVVGQIKIDGTNISTIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEHSDDQIWEALDKCQLGDEVRKKEGKLYSTVSENGENWSVGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRLHFTDSTVITIAHRITSVLDSDMVLLLEHGLIAEYDTPGKLLENESSLFAKLVAEYSMRSNSSFENASDT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="-" PGL_start="131401" PGL_stop="130700"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="131401" e_stop="131321"/>
            <exon e_start="131220" e_stop="130926"/>
            <exon e_start="130822" e_stop="130700"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.847" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.969" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="131401" e_stop="131321" e_length="81"/>
          </exon>
          <intron i_serial="1" don_prob="0.847" acc_prob="0.999">
            <gDNA_intron_boundary i_start="131320" i_stop="131221" i_length="100"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="131220" e_stop="130926" e_length="295"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.969">
            <gDNA_intron_boundary i_start="130925" i_stop="130823" i_length="103"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="130822" e_stop="130700" e_length="123"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="131401" stop="131321"/>
              <exon start="131220" stop="130926"/>
              <exon start="130822" stop="130700"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U346735" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATCATTGCAGTAATGTCACAAGTCGCATGGCAGATCTTCATAGTCTTTATCCCAGTCATTGCAATTTGCATTTGGTTGGAG : CAATATTACATCCCTGCAGCACGAGAACTGGCACGTCTAAATGGGACATGCAAAGCTCCAGTAATACAGCATTTTGCTGAAACAATTTCAGGATCAAGCACAATTCGAAGTTTCGATCAAGAATCTAGATTCCAGGATGCAAGCATGAGATTAATAGACAATTATTCTCGGCCTAAGTTTCACACAGCTGCTGCGATGGAGTGGCTTTGCATGCGTTTGGATATGTTATCTCTGATTACTTTTGCTTTCGCGTTGATTTTCTTGATCTCTCTTCCTGTTGGAACAATCGATCCAA : GTGTTGCTGGCTTAGCTGTTACATATGGACTTAATCTAAACGTACTGCAAGCTTGGGTTGTATGGAATCTTTGTATGATGGAAAATAAAATTATTTCCGTCGAAAGAATACTTCAGTATGCTG</gDNA_template>
            <first_frame> I  I  A  V  M  S  Q  V  A  W  Q  I  F  I  V  F  I  P  V  I  A  I  C  I  W  L  E  :  Q  Y  Y  I  P  A  A  R  E  L  A  R  L  N  G  T  C  K  A  P  V  I  Q  H  F  A  E  T  I  S  G  S  S  T  I  R  S  F  D  Q  E  S  R  F  Q  D  A  S  M  R  L  I  D  N  Y  S  R  P  K  F  H  T  A  A  A  M  E  W  L  C  M  R  L  D  M  L  S  L  I  T  F  A  F  A  L  I  F  L  I  S  L  P  V  G  T  I  D  P   : S  V  A  G  L  A  V  T  Y  G  L  N  L  N  V  L  Q  A  W  V  V  W  N  L  C  M  M  E  N  K  I  I  S  V  E  R  I  L  Q  Y  A  </first_frame>
            <second_frame>  S  L  Q  *  C  H  K  S  H  G  R  S  S  *  S  L  S  Q  S  L  Q  F  A  F  G  W  S :   N  I  T  S  L  Q  H  E  N  W  H  V  *  M  G  H  A  K  L  Q  *  Y  S  I  L  L  K  Q  F  Q  D  Q  A  Q  F  E  V  S  I  K  N  L  D  S  R  M  Q  A  *  D  *  *  T  I  I  L  G  L  S  F  T  Q  L  L  R  W  S  G  F  A  C  V  W  I  C  Y  L  *  L  L  L  L  S  R  *  F  S  *  S  L  F  L  L  E  Q  S  I  Q  :  V  L  L  A  *  L  L  H  M  D  L  I  *  T  Y  C  K  L  G  L  Y  G  I  F  V  *  W  K  I  K  L  F  P  S  K  E  Y  F  S  M  L </second_frame>
            <third_frame>   H  C  S  N  V  T  S  R  M  A  D  L  H  S  L  Y  P  S  H  C  N  L  H  L  V  G   : A  I  L  H  P  C  S  T  R  T  G  T  S  K  W  D  M  Q  S  S  S  N  T  A  F  C  *  N  N  F  R  I  K  H  N  S  K  F  R  S  R  I  *  I  P  G  C  K  H  E  I  N  R  Q  L  F  S  A  *  V  S  H  S  C  C  D  G  V  A  L  H  A  F  G  Y  V  I  S  D  Y  F  C  F  R  V  D  F  L  D  L  S  S  C  W  N  N  R  S  K :   C  C  W  L  S  C  Y  I  W  T  *  S  K  R  T  A  S  L  G  C  M  E  S  L  Y  D  G  K  *  N  Y  F  R  R  K  N  T  S  V  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0184E04.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="131401" stop="131321"/>
                    <exon start="131220" stop="130926"/>
                    <exon start="130822" stop="130701"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>498</number_coding_nucleotides>
                  <number_encoded_amino_acids>166</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IIAVMSQVAWQIFIVFIPVIAICIWLEQYYIPAARELARLNGTCKAPVIQHFAETISGSSTIRSFDQESRFQDASMRLIDNYSRPKFHTAAAMEWLCMRLDMLSLITFAFALIFLISLPVGTIDPSVAGLAVTYGLNLNVLQAWVVWNLCMMENKIISVERILQYA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 28 chains have been computed
$ 
$ memory statistics:
$ 274392 bytes spliced alignments in total
$ 21 spliced alignments have been stored
$ 13066 bytes was the average size of a spliced alignment
$ 27440 bytes predicted gene locations in total
$ 18 predicted gene locations have been stored
$ 1524 bytes was the average size of a predicted gene location
$ 4 megabytes was the average size of the backtrace matrix
$ 36 backtrace matrices have been allocated
$ 
$ date finished: 2008-03-07 04:34:06
-->
