<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2008-02-20 09:12:25"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C07HBa0220H02-y5Yru/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/cxgn-bacpublish-resources-98Fe43/lycopersicum_combined_unigene_seqs" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-98Fe43/lycopersicum_combined_unigene_seqs" ref_id="SGN-U313386" ref_strand="+" ref_description="SGN-U313386        Tomato 200607 #1 [43 ESTs aligned] arabidopsis/peptide: | Symbol: None | glutathione S-transferase, putative, Second of three repeated putative glutathione transferases. 72% identical to glutathione transferase (Arabidopsis thaliana) (gi:4006934). Location of ests 191A10T7 (gb:R90188) and 171N13T7 (gb:R65532) | chr1:5872142-5873079 FORWARD | Aliases: F20D23.12, F20D23_12(evalue: 8e-93, score=337) genbank/nr: gi|27447206|gb|AAL92873.1| glutathione S-transferase-like protein [Lycopersicon esculentum](evalue: 3e-126, score=454)">
      <seq>cggccgaattgatttttatttttttatattttgatgttaaagttctggcttggccaacttaaggcatctacacccctatatatacttcgtgtatgtatatacaacaagcaaatcaatactttggcaattttgagattttttttcttaattcatacaaaataaaatggctaatgatgaggtgattctgttggatttttggcctagcatgtatggtatgaggctaaggattgcacttgctgagaaagagattaaatatgagtacagagacgaggatttgaggaacaaaagtcctctgcttttgcagatgaatcctattcacaagaaaatccctgttttgattcataatggcaaaccaatttgtgagtctatcattggagttgagtatattgatgaagtgtggaaggataaagcccctttgctcccttctgatccttatgagagagcacaagctaggttttgggctgattacattgacaagaagttatatgctacaggaagcaagatttatacagcaacgggagacgaacaagaggcaggtaagaaagatttcgtagaaatccttaaagtgttggagggagcacttggagagaagccttattatggaggagataactttggttttggggatattgctctcattgggttctactgctggtttcatgcttatgaggtttatggtaacttcagcattgaggctgagtgcccaaaccttgtggcttgggccaagaggtgcatgcaaagggacagtgtggctaaaactttgcctgaccaacataagatcattgagtttgtaaaaattcttagggaaaagcttggacttgaataaataaacatatgcatatcatagtagtattgaagaaaggcacttcattctgcctttatcttgtgttgtttcaagatttgaaatgtttgtttggttatagtgtaagttctatttctaatagtaataaaggataagcttgtgtcttgttaaaaaaaaaaaaaaaagatgagaagtaattactttttttttatctaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacccggggggggggggcgggacccattttcccctaaaagggggaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0220H02-y5Yru/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0220H02.1" temp_strand="-" temp_description="C07HBa0220H02.1  AC212638.1 htgs_phase:1 submitted_to_sgn_as:gi|158262133|gb|AC212638.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0220H02, *** SEQUENCING IN PROGRESS ***, 9 unordered pieces">
        <position start="15648" stop="13234"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15351" g_stop="14871" g_length="481"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="481" r_length="481" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14870" i_stop="14078" i_length="793">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14077" g_stop="13537" g_length="541"/>
          <reference_exon_boundary r_type="cDNA" r_start="482" r_stop="1022" r_length="541" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1113" polyA_stop="1122"/>
      <MATCH_line gen_id="C07HBa0220H02.1" gen_strand="-" ref_id="SGN-U313386" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>1022</cumulative_length_of_scored_exons>
        <coverage percentage="0.911" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0220H02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U313386" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15351" e_stop="14871"/>
          <exon e_start="14077" e_stop="13537"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGCTAACCTATTTTTATTTTTTTATATTTTGATGTTAAAGTTCTGGCTTGGCCAACTTAAGGCATCTACACCCCTATATATACTTCGTGTATGTATATACAACAAGCAAATCAATACTTTGGCAATTTTGAGATTTTTTTTCTTAATTCATACAAAATAAAATGGCTAATGATGAGGTGATTCTGTTGGATTTTTGGCCTAGCATGTATGGTATGAGGCTAAGGATTGCACTTGCTGAGAAAGAGATTAAATATGAGTACAGAGACGAGGATTTGAGGAACAAAAGTCCTCTGCTTTTGCAGATGAATCCTATTCACAAGAAAATCCCTGTTTTGATTCATAATGGCAAACCAATTTGTGAGTCTATCATTGGAGTTGAGTATATTGATGAAGTGTGGAAGGATAAAGCCCCTTTGCTCCCTTCTGATCCTTATGAGAGAGCACAAGCTAGGTTTTGGGCTGATTACATTGACAAGAAGGTAAATTCATAGCCCTTTCCCCTTTTCATTTTAGTATTTATTAGCCAATCTAAACTAATTTGGGATTGAAGCATTTTTCTGCTGTGTTTGTGTTGTTACAGTGGGTTAGAGTTCCACCTCGATTTGAATAGATTAGTTGTTTACTTATATGAACATAGATAATTCTCTTGCCGTGAACTAACTTTTGAAGTTGACTGAGTTAGACATATGTGTTACGTCTTTACATGATTTTAGAGTCAGATTCATTTTTGTTTGTGCTTCTAATTAATTTGAACTCATGTTGAATCAAGACATGAAGGGATGTAAAAGTGGGTTAGAGTCGCACATTAGTTGGAGAATGAACTTTCCTAATTATGAGCTAACTTTTAAGATTGAGTAAGGTTTAAAGTTTCATATAATATATGATATCAGAGTCAGATTCATTTCTATTTGAATTTCTGTCCCAAGAACTAGTTGGGCCTTGATGTGAAGAGTGTGTTAAGAGCCCCAAATTGTGTCGTTTATATAATTTTAGTTAATCATCACTTCACAAGCTAGACAACCCCCACCCCCCTTTCCGCGCTCTAGATGCTAAGTCGTGGTGGTGTTAGAGGTTAAATTAGTTGAAGAAATGAAATATTGTCTTGGTTAATCCTATTCCCCACTTTGTAAACCAGGACCTCCTACTCCAGATGCTCAGTCTTAGGCGTGAGGGGTTCAACATTAGTTGAAGAAATAGAATACTGTCTCAGTATAAGTTCATGTTTTGTGGCAATAAGTTTTGACCGTTTTCTTGTGTTTGTTGAAATTTCAGTTATATGCTACAGGAAGCAAGATTTATACAGCAACGGGAGACGAACAAGAGGCAGGTAAGAAAGATTTCGTAGAAATCCTTAAAGTGTTGGAGGGAGCACTTGGAGAGAAGCCTTATTATGGAGGAGATAACTTTGGTTTTGGGGATATTGCTCTCATTGGGTTCTACTGCTGGTTTCATGCTTATGAGGTTTATGGTAACTTCAGCATTGAGGCTGAGTGCCCAAACCTTGTGGCTTGGGCCAAGAGGTGCATGCAAAGGGACAGTGTGGCTAAAACTTTGCCTGACCAACATAAGATCATTGAGTTTGTAAAAATTCTTAGGGAAAAGCTTGGACTTGAATAAATAAACATATGCATATCATAGTAGTATTGAAGAAAGGCACTTCATTCTGCCTTTATCTTGTGTTGTTTCAAGATTTGAAATGTTTGTTTGGTTATAGTGTAAGTTCTATTTCTAATAGTAATAAAGGATAAGCTTGTGTCTTGTTAAATGTTGGCTTTTGTGATGAGAAGTAATTACTTTTTTTTTATCTAACACA</genome_strand>
        <mrna_strand>CGGCCGAATTGATTTTTATTTTTTTATATTTTGATGTTAAAGTTCTGGCTTGGCCAACTTAAGGCATCTACACCCCTATATATACTTCGTGTATGTATATACAACAAGCAAATCAATACTTTGGCAATTTTGAGATTTTTTTTCTTAATTCATACAAAATAAAATGGCTAATGATGAGGTGATTCTGTTGGATTTTTGGCCTAGCATGTATGGTATGAGGCTAAGGATTGCACTTGCTGAGAAAGAGATTAAATATGAGTACAGAGACGAGGATTTGAGGAACAAAAGTCCTCTGCTTTTGCAGATGAATCCTATTCACAAGAAAATCCCTGTTTTGATTCATAATGGCAAACCAATTTGTGAGTCTATCATTGGAGTTGAGTATATTGATGAAGTGTGGAAGGATAAAGCCCCTTTGCTCCCTTCTGATCCTTATGAGAGAGCACAAGCTAGGTTTTGGGCTGATTACATTGACAAGAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATATGCTACAGGAAGCAAGATTTATACAGCAACGGGAGACGAACAAGAGGCAGGTAAGAAAGATTTCGTAGAAATCCTTAAAGTGTTGGAGGGAGCACTTGGAGAGAAGCCTTATTATGGAGGAGATAACTTTGGTTTTGGGGATATTGCTCTCATTGGGTTCTACTGCTGGTTTCATGCTTATGAGGTTTATGGTAACTTCAGCATTGAGGCTGAGTGCCCAAACCTTGTGGCTTGGGCCAAGAGGTGCATGCAAAGGGACAGTGTGGCTAAAACTTTGCCTGACCAACATAAGATCATTGAGTTTGTAAAAATTCTTAGGGAAAAGCTTGGACTTGAATAAATAAACATATGCATATCATAGTAGTATTGAAGAAAGGCACTTCATTCTGCCTTTATCTTGTGTTGTTTCAAGATTTGAAATGTTTGTTTGGTTATAGTGTAAGTTCTATTTCTAATAGTAATAAAGGATAAGCTTGTGTCTTGTTAAAAAAAAAAAAAAAAGATGAGAAGTAATTACTTTTTTTTTATCTAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-98Fe43/lycopersicum_combined_unigene_seqs" ref_id="SGN-U313388" ref_strand="+" ref_description="SGN-U313388        Tomato 200607 #1 [15 ESTs aligned] arabidopsis/peptide: | Symbol: None | glutathione S-transferase, putative, similar to glutathione transferase GI:2853219 from (Carica papaya) | chr1:29491306-29492799 REVERSE | Aliases: F3F9.11, F3F9_11(evalue: 1e-63, score=239) genbank/nr: gi|6653233|gb|AAF22647.1| glutathione S-transferase/peroxidase [Lycopersicon esculentum](evalue: 5e-91, score=336)">
      <seq>aatggcaaaccaatttgcgagtctattattggagttgagtatattgatgaagtgtggaaggataaagcccctttcctcccttctgatccttatgagagagcacaagctaggttttgggctgattacattgataagaagttgtatgattctgggaggaagctatggacaacaaagggagaagagcaagagacagctaaaaaagatttcatagaatgccttaaggtgttagagggagcacttggagagaagccttactttggaggagataattttggttgtgtggatattgcgttgattgggtactatagctggttttatgcttatgagagttatgctaacatcagtgtagaggctgagtgcccaaagtttgtggcttgggccaagaattgtatgctgagggacagtgtggctaagtctttgcctgatcaacataaggtctgtgaatttgtaaaagtgctaaggcagaagtttggaattgaataaacatatggaccatgattctgctaataaaggcgcttcgcccttctttttattgaaatgtgtgtttggtcatagtgtaattgagttctgcttttacatgtaataaaaactcttggatctgttttcttgagtcttgtctattgtatgattctgggattttcgaaaaaaaaaaaaaaaaaactcga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0220H02-y5Yru/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0220H02.1" temp_strand="-" temp_description="C07HBa0220H02.1  AC212638.1 htgs_phase:1 submitted_to_sgn_as:gi|158262133|gb|AC212638.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0220H02, *** SEQUENCING IN PROGRESS ***, 9 unordered pieces">
        <position start="29167" stop="8315"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28867" g_stop="28730" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="138" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28729" i_stop="28657" i_length="73">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28656" g_stop="28307" g_length="350"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="488" r_length="350" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28306" i_stop="25832" i_length="2475">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="0.62"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25831" g_stop="25790" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="489" r_stop="524" r_length="36" r_score="0.619"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="25789" i_stop="22402" i_length="3388">
            <donor d_prob="0.999" d_score="0.62"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="22401" g_stop="22387" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="525" r_stop="539" r_length="15" r_score="0.800"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="22386" i_stop="18930" i_length="3457">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18929" g_stop="18920" g_length="10"/>
          <reference_exon_boundary r_type="cDNA" r_start="540" r_stop="549" r_length="10" r_score="0.700"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="18919" i_stop="17346" i_length="1574">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.970" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="17345" g_stop="17332" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="550" r_stop="563" r_length="14" r_score="0.714"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="17331" i_stop="17272" i_length="60">
            <donor d_prob="0.968" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.83"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="17271" g_stop="17170" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="564" r_stop="665" r_length="102" r_score="0.833"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0220H02.1" gen_strand="-" ref_id="SGN-U313388" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>671</cumulative_length_of_scored_exons>
        <coverage percentage="1.009" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0220H02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U313388" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28867" e_stop="28730"/>
          <exon e_start="28656" e_stop="28307"/>
          <exon e_start="25831" e_stop="25790"/>
          <exon e_start="22401" e_stop="22387"/>
          <exon e_start="18929" e_stop="18920"/>
          <exon e_start="17345" e_stop="17332"/>
          <exon e_start="17271" e_stop="17170"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGGCAAACCAATTTGCGAGTCTATTATTGGAGTTGAGTATATTGATGAAGTGTGGAAGGATAAAGCCCCTTTCCTCCCTTCTGATCCTTATGAGAGAGCACAAGCTAGGTTTTGGGCTGATTACATTGATAAGAAGGTAAATTCATAGTCCCTCTGTTTCAGTTAAGACGGTAAGTAACTATTCTCTTTTGGTTTGTTGAAATTTTCAGTTGTATGATTCTGGGAGGAAGCTATGGACAACAAAGGGAGAAGAGCAAGAGACAGCTAAAAAAGATTTCATAGAATGCCTTAAGGTGTTAGAGGGAGCACTTGGAGAGAAGCCTTACTTTGGAGGAGATAATTTTGGTTGTGTGGATATTGCGTTGATTGGGTACTATAGCTGGTTTTATGCTTATGAGAGTTATGCTAACATCAGTGTAGAGGCTGAGTGCCCAAAGTTTGTGGCTTGGGCCAAGAATTGTATGCTGAGGGACAGTGTGGCTAAGTCTTTGCCTGATCAACATAAGGTCTGTGAATTTGTAAAAGTGCTAAGGCAGAAGTTTGGAATTGAATAAACATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAAAAAAAAAAAATTTTACCCTTTCCTAAATTTTATTTGTACGAAATGTTTTCTATATCGAACCACATTTTCCCCTTTAATACTCCTGTTCACATTTCTAAGGTTTCAAAATATAAGTTGAGCCATGCACAAATATATTCCATCTAAGGATTAAAATTAACCTAGCAAATCAGAGAGTATTTTGATTAAAATTAGTGCAAAATATTATTGATAATGTTTAATAACAAATAAGTAATATAAAGCTAATAAAAATAATTGCAAGTAAAATAACTTTCTTAAAAATGAATTTCTTCTTAATCACATCCAACAAACTGCAAGAAAATAAGTCGATTTATGCAAAATCGTCACTTATAATTTTTTCATGTTTTAAAAGTTGTACAACTATAGTCCTTGGGACCAACGAAGTACAAAATGTCTGTCTAACTTTTATAAAATTTTATATCGCGATCTAAATTATCATCATAAATTATTTAAATTTATTTTTAAAAAAATCATTTATCATAAAATAATAATTTACTAAATAATTGTCGCTATCGGCCCATTTACGAATCGTAAGGGCCCAATGATTAAATCTTGATATTTAGTGGTTGGCCCAATGATCTGGAGCCCATAGGGGGAGGGACATACAACGTCACATGCCTTTCATGTATATTCCTATAGCCAACATTATGTCATGTTGAGGTTATAATGCAAAGCCATACAAGTAGGCACATGTATTTGCAACAAATAAAATGTTATTTTGGGTTGGGGTGGGGAAGATAGAGATATAATGAAACTTGGAGTGATTATATACACATACATAGACATTTTAAAATAATGACGGTCGAGATAGAAATTTCACTGTGATATGATGTTCTTATAAAAGAGGATTCACACCATGTGTGGCTCTATCAATAATGAGCTTGCTTGGTATGAGGAATAAGAGATAACTGATCTCAAGATTGATTCCGAAATGAGTTTATTCGATATTTAACTGAGATAAAACCACTAAATAATTATCTCAAGATTGTAATGTTATTTTTTATGAAATCCATATTAAAATTGGAATATTCAATATAACGTATTCCCTAGTCAAATGAATTGTAAGAGTTTGGATACATACTAAATTGGAACCTACTAAATATACCCTAAGATTTAACCTTTGATAAGTTCTTTTCTTACCTTATTCACTTGTAAACTCTCGAATTGAAATCATACTAAATGTAGCAAATATCAGAAATATTGGAGGTTTGAATAATTTAGATTATGTATTTTTTTGTTTTATATTATTTAGCTCGTATTGACTTAACTCATTTCTTTAAAATGCTATTTATTGGGAGTGTATTACTAAATTAACTTTATTAATAATACTTTGAAATTCTAAAATTTACTATTACTATAATTATTTAATACTAAGAATAGAACCAAATATTTCTTTATATAATAAAAATCTCTTTATTTATCGAATCAGACTAGCAAAAGAAAACATCTTTTAATAGAACTAGGGGTCAAGTAATATAAACAATAATAGTATATTAATAAATCTAATAAATATTTTTTTTAAAAATTAATTCTTCAATATAAGTAACTCCTTTTTTAATATATCTAAACCCATAAGTTTCAAAAATATTTCAATGCATACATATACTTTTAGTTAAGATTAAAAATATTTAAAACTCTTTATTTTTAAATATGTATTTGAATGTTATTAAAATAAATAAATAGAAACCACGACAATAATTTAAATATCAATTTTAGGATGAAAAATAAGGGGCCACAATTTAGACACTTTGACTGAAATCACATTCTAATACAGTAATTGAGACTTGAGAGGGAAACATACTGAGAAAAAAGGGAAAAAAAAGAGAGGGAAACATCAATTTTTCAAGTTATTATTTTTATTGCCTAACAAAAATATATAAAAAAAAAAATAGGACTGGCAAATTCAGGTCTCTATCACGTGCCAATGGCAGGTTGGTACATTACTCTAATTATTTAAAAATTTATTTAATAATTTGATGAATTATTAAGCATTAACTAAATAGGTAAGGGGCCATTATTATTGACAAATAATGAGTGAAAGACTATTTTATTTTAGTTTATTTTGTACTATTATTATTTTTTTTCTTATTATTCTATTCATTTTTATTACAGAGATTGAAGCTGATAGTAGTGATAGTGTAGGGCCCAGTGTTCACCACGTGGCAGACAGCATCGTATAAACTTTCCAACTGGGTCCCATGATATTGGGCCCCATCACGTGGGTCCATTAACCTGGCCACTTTCTATATCTGGGGTTCTTCTCTAATTAAAAATTATTGAAGTTTAAGTAGTTTTTTTTTTTGTTAATTTTATTTAATTAATGAGTTCTTAGTTATATTCTTAATGGGTTAGTGGCACAAAGTCGTCTGCCTAATGACACTGGCGTTGGGTCCGGTAACTTTCGACAATAATTTTTCAATTAATACAAAAATTATTTTACCTATCGCTTGATATAGTAAATTATATTAAAATTATTTTTTATTGATGATTTGATTTGATTTGTTAACTATCTTTAATCTTGCTTATATGTATATTTATATTCATTTTATTATTAATATCATTATTTATATCTATGTACTAATTATACAAAGTAACACCAAATAAAATGTATTAATTATATGTAAATCTAAAATCTTATCAAATAAAGGTTTGAATAATATCACGACTACTATATATATTCTTTTGTTTCAATTAATTTGATTTGTTTTTTCTTTTAAAAAATTACGTATAACAATGAGTTTTCTAAATCAAATATAGACTAATTTTGTTTCATTTGCTCAATAAAACTCGTACGAAACCTTTATATTAAATATAAAATTATTGGTACAATTAATTGTCAATTATAGATACTCTAATTAAGATTTTATCAAGTGTTCAATCAATGATGGGGGAATTAGGAACAACTCCTAATTATGGCACCGTTCTATAAGGGATATTGTTTAGACTTTAGAGTCTATGATATATAAGCAAAAGATTTCCAAGATTTATTTGGGGGAAATGTGAAAATAATTAGTACTCAACATAATTAAAATATTTTTATAATGACAAAGTTTGTATGAGAAGATATATGTATACCACCGCATAGATTTTATTTAGTTGTTATAAATCTAACTATGTAAAATTAGAAGAATCGAATACGAAAAAGTAAACATTAGTAACATTTTCTAGTGAAGTTAGGACCATATAACTTATGGATACTACTTAAACATAATTTTTTACTTTTTAGTGTCTTGAGATTTACTACATGCATGACATCAATAATAACTACTATAAATATTTTATTTTTATAAATATTTATTTACACTATATGTGAATATTATGTAATTAAGAGAGAATTTTACAAAAGTGAACTATCATAATGAATGTCATTATTGATATAAGTAGAGTGTTACTAAAGAAAATATATAATGTGAAAAAATTAATTATGGAAAAAAGGAGAAAAAATAATTTTATAAGAAACTACAGTTATAAAAAAAAATCGACTGTATTTAAATTAAAAAATTGTAATTATATTCTATGAAAAGACTTCCTACCATTTTTTTTAAAATTTTTCTACCATGCAACTGCAAACATATTTCACGTGTGATTAAGATAACCATATGCTTTTGGCCATTTGATTTAATTTGCACCAATAATTTTTTTTTACACTATTTCGAAAGTACTACTCCATAATTGGAAAAGATGTATCAATAATTTCATTTTTATTGTACTGATTTGTGATTAATGCCGAAAAATCAACTCTATTTTTTAAGTATGATTAGATATGTCTGCATGACTTAGAAGAGTTTCACACTATTTAGAACTAAATTTTATCGAAAAATGGTTGATAACTGATAATAATCGTAAATAGCAATATAAATTATCATGAGATAATTGAATTCTCTTGTATTTTTAATTAGATATCTTATATTTGAATTCTTAGAAATAAAAAGAATATTCACTATCTCTAAAATGATGATAATATACAAATCCAAATTTAATAGTTAGAGTCGGGTGAATATAATTGCTCCATTTTCAATAGTTCATAAAATCAAATCCATGTATTATATGTCTATTCTACCTGGCTAACAATAAATATATTACAAAAAAAAATAATCAAATATTCAGTAAAATCTCACTAAATAAAATTTATTGAAAATAAAATGTACGTAAATTTTATTATTATTTTGTAAAAGTGAATCTACAAGAGCGAAACAATTATAATACAATAAACAGTCTATGAAAAAAATTACTAATGAACAAGAATATTATTGTACTAGAATGCAATATTTTTAATAATTAAGAACTTATTTATTAATAAAGGTCAAAAATCGAGTAATATAATTATAATTTCTAGCAATCTAAGGAAAATTCTGAAAGTTATCTAGAGAATGGTAGACATAGAACTAAAAAGAAATAATTGATTGGAGAATACAAATCCCAAGATCATCTGCTTTTAACTGCAACTATTTTAATATATAGTCTGAATTCAGAGAACTCATTTACTGCTCCTACATGTATGAACAAAGTATTATTCATTTATTATAAGTTGTGGGAAGTCAGTTTTCAAAATTTATTATTTATTGTTAAAAAAAGAAGAAAAAGGACAATAATTAGATCAGTGAGAAACGTAGACTATAGACTCATACACCATGCAAAGCCAAAAAAATAAAATAAAAAGTCTTCATTTTTCTTACCCACTCTATACGCTAAACGCCGTTGCCGCACGGTAGTTTCATAAATGTACTTATATTTTTCTTTTAAAAAAAGGTTATTTGATTGTGAAACAAATAAGGGTTTCTACGTCTTCTATTATTTGTAGCTCGATTCATTGTTTTTACTTAACTTAGGAGTTAAGAGATAAAGAGACGATATTCAAACAAGTTAATCGGATTATCTAATAATGCAAGTATTCGATGTCTCTTCACATATTCGAACTTGACAACTAAAGCGTGAATATAATATGTGATCAATAGCAGACTCGGGTGTTTTCAGAAACTCGAATTGAGGGCATGCAACTTGACATTCAACGGACTTGCCATTGAATCATCTATTTCTATTTATTTTTTAGGGGGTTCAAAATGTATATATTTATAAAAATACAAAAAATTTACTTTTTTATATATATTGTGTATATTTGTATCGACTGTGTGAATCAAGAATTAAACCGAAACGAATTCCTATATTATGATAAAGAAATTTATGTTGGATCTAATTTAATTCCTCATAAGTTAAAAATTATTTGAGTTCACATAAAAAAGATAATCACATCCTTAATTAGCAAATGTGAAAACTCAACATATATAGCCTTTCTTGCAAACACATGTTAAGTAAATTTAAGTTATATTTTAGACCTGAAACTATTGATTAAAACGATAGCGAAATATTTTTAAATTTATAACAAGGTTTATATTCATTCATTTTCTCAATCTCTAATCTAAAATAATTTAAGTTTGATGTAAAGATGCTTTAAAAATATAATATACCTAATTTATTTATTTCTCATAATAAAAAAAATTCACAAATCACTAATTTTTAGGCAAACATAATAAATGTCGCTCATATACACTAATTTTCAAATTATATAGAAAAAATAACTCACACCAAACTTATCTGATGTGGCAAGCTCGAGCAAGGTCATCAACACTCAATAACGACTAGTTAAACTTGACATAGTGCATTATAAAATCAACGTTATTAATATGGTGTTACTGCAGAGATCCCAATGTCAATTAGGCGGCTTCCATTACCTTTCTAAACTCCTTATCACCAACAAGGTAAGAAGCATCCTTCCATTTTATTCTCTTTTAATTAAATTATCTCCTTATAAGTCAACTTTTCTAAAAAACCTAACTTTGTTACCACTTTCCTTCCTTTGTCTCTATCTCTCTTCTTGTTGGGTCAACCAACCACGTTATTAACATTAATTATATGTCCCCTCTTCATTTGATTCTCAATTTTTTTTATTCGTTAAATATTTATATTAAAGTCCGATTAAAAAATATTTTATTATTCCACGTAGAGTCATGTGATTCTTCTTTATAAAATGTAGTGCCATTCCCTCTTATAAACTCACCAACATTTTTCCAAAAGCACAAAGTTTTCTCTCTGAACACAAAAATGGAAGAATTAGATGCTCTTTATCCACCAGATTCTGATCTTGATCTAAGTTTCACAAGTTGTGCTTCCATTACTACCACCACAACGGATCGTACACTCAGTGCGAGAAGCAGTTTAGCTCGTAGTAGTCTTACATTGAGCTTCAACGATCGTCTTTCATGTACGTCCTCAACAAACAATCCATCTGCAGAAATCCCCAATTTCCACCGCCGTGCACACCGCCAGCACGACCCGAATTGGTCTGCTATTAAGGCGGTGACCACCCTTTCCTCCGATGGCTCTCTCCATCTCCGCCACCTTAAACTCCACCGCCTTGTTGGGTCTGGAAATCTCGGCCGAGTTTTCCTCTGCCGTCTCAGGGATTATGACCATGCTAATTTTGCCCTTAAAGTTATCGATCGGGATTCGCTTACAGCGAAGAAGATTTCTCATGTTCAAACGGAGGCGGAGATTCTCTCCTCTTTAGATCACCCTTTTCTACCTACACTTTATGCTCATTTAGAAGTTTCACATTATACTTGCTTGTTAATCGATTTCTGCCCTAATGGGGATCTCCATTCCTTGCTCCGAAAACAACCTGGAAACCGTTTACCGGTTGATTCAGTCAGATTCTACGCAGCTGAGGTACTCATAGCACTAGAGTATCTACATTCTCTCGGAATCGTTTACCGTGATTTGAAACCTGAAAACATACTTATTCGTGAAGATGGTCACATTATGCTTTCCGATTTTGATTTATGTTTTAAATCCGAAGTTTCCCCGAAATTAGATTTCACTACCCGTGTTCTAGAAGGATCTAGAAGAAGAAGAAACAGTTGTTACGGTGACCGGCAACGGGAAGAAACAGTGACCGAGTTCGTCTCAGAGCCAACATCTGCATTTTCTAGATCATGCGTCGGGACTCATGAATACTTAGCGCCGGAGCTCGTCAGCGGCGCCGGCCACGGCAATGGTGTAGACTGGTGGGCGTTTGGGGTGTTACTATACGAGTTGTTGTACGGTACGACACCGTTTAAAGGAAGCAGTAAAGAGTCTACCCTGCGCAATATAGCATCAAGCAAAGGAGTGAAGTTTTACGTAGACGAAACTCAAGGAGAAGAAGCTGAATTGAGAGATTTAATAGAGAAATTATTAGTTAAGGATCCAAGGAAGAGGCTAGGATGCACCAGGGGTGCAACGGATATTAAACGTCACCCATTCTTCGCCGGAATAAAATGGCCGTTGATCAGAACTTACCGGCCGCCGGAAGTACGGGGAATAACGATAAAAAGGACGAAGAGTAAGGCGCATGTGAGTCACGTGACTGGATTCTCGTCATCACCAAGAATAAGAAGGCGTTGTTTATGGAAAAAATTGGGTTATCTAATGAGGATTAAGGGATCTAAGTACAATTTAAACTCTAATCATAATTATTATTGTCATACTAATCACAAGGTTAGAAAATGTGCTTAAATCCATTTCAACCTTTTGTAAAACCATTTATATTGTTATAATTTTCCCCTTTTTTTTTGGGTATAAGTTTGTAAAGGAGGAGTTAGAGAACATCAATTTTGGGGGGAGATGTTCAAATTTTTTTCCTTTTCTTTGGTTTGTTTCCTTTTTAAAGGAAATTTCATACATATTTGTAAATGAAAAAGAAAGTTATGGAAGAAAAAGTATTTATTTAATTATGTATTATTTGCTTCTGTAATTCTTTTTTACATGTTTTCTCATTTTATAATGTATTAAATGCTTACATTAGGCTAATAGGTGCATGACAGATACGATAAGATATACGTAAATCTAACTACAATCGATATATAGAAAAGTTGTTCTGAGTAACAAACATAGCAATCAAAATGAATTTTCATTTCATTAAATTACATTTTTATATATATATATATATACATTGACAAAAATATCTTTGATTAAATATGATTGTCTCCTTTCCTTTTATTCCCCTAGCAACAATATAATCTTTTTTATAAGAAAAAGAAAAAAGAAAAGAGAAAAACAAAACTCCTAATTGCTTTCCATGTTGTAATTTGTTGTTGTTGGTGGACAAAAAATGTTTGGTAATTTTGTAAAATATGCCATTGAAAAGAAGAAAAAAAGTTCCTTAACATGATATATTCCTCACATATGCTAATGATGAGTTTGTAATATGATATTTTAATAATTAAATGAATGATTTTGTCCCATTCTTTAAAATTGTAAACTCCTGTTAGAAGTGAATATGCTCATCATAATAATGTCTTGATATTATTGATCAATCTTTATGTTATTGAAAACTTTACTTAGGCTGGAAAACATTATTATGACACATTGAAAATAAACAAATTCTTACCGTCTTTATTTATATCAAGTATAAATAAAAAAATGTACAACTTACATATATATTAAATGATGAAAAAAATCGAGGAATCATATTGATTGTTTTTTTTTTAAATACTTTATTTAAATATGTTTTTAATTATGCTATTATATTGATTCTTCTCCAAATATGAATAGTTAGACGTTCATTCAGTTTTTATGATAAAAGACTATAGATCATTGATCGTGACATTTACGAGTATCAGATAATTAACAGTTAAACGTGGGACATCAAACTAAACATGAACATATGATGGCATGTGGGAGCAATATGGTGTGGTTACCATAATTCATGCAAATTGCATATGGGTTTCCAAGGTTTTGACTTATAATTAGTCAGCAATATTTATTATTATTGTTAATTATTATTATTAATTAATATAATATGAAACCTAACTTTGGTGGATGGTAACTGGGAGAAGGGACCAAATTAATACTAGTAAAATAATTTAAGAATGGATAGAAACCTAATTATTCCAGAAGGTCTATAATTAATTATAAAGCCTATTTGCATATTAAATAAAAGTTGCTAGTACAGCTCAACATCGACCGACCACAAGAATTTTTTTGCAAAAAATTAAGTTACAAGTTGTGAGACATAACTATGGTCCCTTTACTAGAAAGTAACATTTATCATTAAATATTACTAACTATATAGTCAAAATTGCATATAAAAATTGGAAATTTTGTTTTCACATAAAAAGATAGTTTTTGCTTATATATAACAATTAGCTGATAAGATCTGATGTCCATTTACTATAATAGCCAACAATAGTCTAGACAAACGGCGCTACTATAAAGAGGTCTGATTGAATATCCGTTAATTCAAGCACAAAATATGTTCTTTATGGGAACCAAGAATGCCAACTCTGACTATATATTATAAGATTATTTCAAAAATAACCAAATGATTAGTAACTGAATACTAATTAGGCAGTTAATGTGTAGACAGATCATAAAAGTAGATATTATAATTTAGAAGATAAATAGATAAGAAATGCCAACTAATAATTATTAGAGGGGAAGTATGGCATCAAAGGTAGTTGTGTGTATACATGAATAATGAGATGCTTCTAACTCTACAACTTCAATTTTCTTTTTCTTTGGTCTATAGTTGGTTAATTAGAACCTGCAAAAAACAGAAAGTGGATGCATTTTAGTTTTCTATGGATGATAATCTGAATTTGTGTTGCTCCGACTCTAAAAAAAAATATCACTCGATGCATGTCAGATCTTCCGAAAGTAGTGTTTGATGATATTATGGAGAGTTCGCGCAACATTCTGAATCGAAATTACCAGACATGTATGGCAGGAATACAGAAATGCTACTAAAAAAATGTAGAAACTGGTTCTTGTTAGTAAACAGACATGTGATTTAGCTGATTTTTCTTTGTGAACATCCCTTCAGTATAGAATAATTCCTTTTATTATTAACTAAACTTAGAATTATGGACATGAAAAATGAGATATCCTTTCTTTTGGGGCTGCTATAAACACAGGTATCGATCAATATGTGTTTAAATGATATACAATCAATCATCTGTATAACTGTGTTAGTTGTTCCAATATTTGGATCCTATAGCGAAATGTTGTTATAGAGAATATGTGATGTAACATAACATGAAAAATCGGTTACATAGGAAACACGTCTGTTATAGTGAAATGTTGTTATAGAGGATGACTGTTATAGAGAGGTTTGACTGTAAAGATTGAAAGTTAACGAGGAAAATGTTTTTATGTACCTTTATTAGCATCAGCTTCACTCAGAGGAGTTTCGGAGGATGGTGATGGTGGTGAAGTGCACACAGATTCCCGGGCTTCAATCAGCATGGCGATGACTTCTCGCATAGTAGGCCTATTGGCAGGGGATGTATTGGTGCAGAACATAGCAATCTTGAGAACTAGAGACATCTCCTCTCTTGTTCTTGCAACACTAACATCCAGTCTTTTGTCAAAAAGCTCAGTTAGTGCCACTCCTTCATGAATTGATCTCCTTACACAAGTCACCAAATCGCCTCCCTGATCGAGGGGTTGAACTGGAGACCTACCAGTAATCAATTCCAGCAAAACAACGCCATAACTATAGATGTCGCATTTCTCTGTCACTTTCATTGTGTATGCATATTCTGAAAAAAAGAAAAAAAAAAAAGAACTTAGTTAGCTTCTGCATTTAAGTTATGCTAATATAGAGTACCGTTTTAAGTGCCTCAAGACCGGTCTTACCAGGGGCAATGTAGCCGTATGAACCAGCAACTGCGGACATGGATTTTGAGTAAGGGAAGTCAATTAGCTTTGCCAAGCCAAAGTCTCCAACATGTGCCTCAAGCAATTCGTCCAACAAAATGTTGTTCGATTTTATATCCCTGTGAATGATATGTGGCTTACAGTCATGGTGCAAATAGCATAGTCCCTCAGCAGCTCCTAAGGCAATTTTGTACCTGCTATTCCAGTTTAGTAAACTAGTTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN</genome_strand>
        <mrna_strand>AATGGCAAACCAATTTGCGAGTCTATTATTGGAGTTGAGTATATTGATGAAGTGTGGAAGGATAAAGCCCCTTTCCTCCCTTCTGATCCTTATGAGAGAGCACAAGCTAGGTTTTGGGCTGATTACATTGATAAGAAG.........................................................................TTGTATGATTCTGGGAGGAAGCTATGGACAACAAAGGGAGAAGAGCAAGAGACAGCTAAAAAAGATTTCATAGAATGCCTTAAGGTGTTAGAGGGAGCACTTGGAGAGAAGCCTTACTTTGGAGGAGATAATTTTGGTTGTGTGGATATTGCGTTGATTGGGTACTATAGCTGGTTTTATGCTTATGAGAGTTATGCTAACATCAGTGTAGAGGCTGAGTGCCCAAAGTTTGTGGCTTGGGCCAAGAATTGTATGCTGAGGGACAGTGTGGCTAAGTCTTTGCCTGATCAACATAAGGTCTGTGAATTTGTAAAAGTGCTAAGGCAGAAGTTTGGAATTGAATAAACATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGG-ACCATG-ATTCTG-CTAAT-A-A-AGGCGCTTCGCCCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTTTATTGAAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTTTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATAGTGTAATTG............................................................AGTTCTGCTTTTACATGTAATAAAAACTCTTGGATCTGTTTTCTTGAGTCTTGTCTATTGTATGATTCTGGGATTTTCGAAAAAAAAAAAAAAAAAACTCGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-98Fe43/lycopersicum_combined_unigene_seqs" ref_id="SGN-U334320" ref_strand="+" ref_description="SGN-U334320        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | glutathione S-transferase, putative, Second of three repeated putative glutathione transferases. 72% identical to glutathione transferase (Arabidopsis thaliana) (gi:4006934). Location of ests 191A10T7 (gb:R90188) and 171N13T7 (gb:R65532) | chr1:5872142-5873079 FORWARD | Aliases: F20D23.12, F20D23_12(evalue: 5e-48, score=187) genbank/nr: gi|6653233|gb|AAF22647.1| glutathione S-transferase/peroxidase [Lycopersicon esculentum](evalue: 3e-60, score=234)">
      <seq>tttctttttcttcattcatacaacaaaaatggctaacgatgaagtgattctgttggatttttggcctagcatgtttggaatgaggctaaggattgcacttgctgagaaagagattaaatatgagtacagagacgaggatttgaggaacaaaagtcctctgcttttgcagatgaatcctattcacaagaaaatccctgttttgattcataatggcaaaccaatttgcgagtctattattggagttgagtatattgatgaagtgtggaaggataaagcccctttcctcccttctgatccttatgagagagcacaagctaggttttgggctgattacattgataagaaggtaaattcatagtccctctgtttcagttaagacggtaagtaactattctcttttggtttgttgaaattttcagttgtatgattctgggaggaagctatggacaacaaagggagaagagcaagagacagctaaaaaagatttcatagaatgccttaaggtgttagaggggagcacttggagaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0220H02-y5Yru/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0220H02.1" temp_strand="-" temp_description="C07HBa0220H02.1  AC212638.1 htgs_phase:1 submitted_to_sgn_as:gi|158262133|gb|AC212638.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0220H02, *** SEQUENCING IN PROGRESS ***, 9 unordered pieces">
        <position start="29376" stop="28248"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29076" g_stop="28548" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="529" r_length="529" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0220H02.1" gen_strand="-" ref_id="SGN-U334320" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0220H02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U334320" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29076" e_stop="28548"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTTTTCTTCATTCATACAACAAAAATGGCTAACGATGAAGTGATTCTGTTGGATTTTTGGCCTAGCATGTTTGGAATGAGGCTAAGGATTGCACTTGCTGAGAAAGAGATTATATATGAGTACAGAGATCGAGGATTTGAGGAACAAAAGTCCTCTGCTTTTGCAGATGAATCCTATTCACAAGAAAATCCCTGTTTTGATTCATAATGGCAAACCAATTTGCGAGTCTATTATTGGAGTTGAGTATATTGATGAAGTGTGGAAGGATAAAGCCCCTTTCCTCCCTTCTGATCCTTATGAGAGAGCACAAGCTAGGTTTTGGGCTGATTACATTGATAAGAAGGTAAATTCATAGTCCCTCTGTTTCAGTTAAGACGGTAAGTAACTATTCTCTTTTGGTTTGTTGAAATTTTCAGTTGTATGATTCTGGGAGGAAGCTATGGACAACAAAGGGAGAAGAGCAAGAGACAGCTAAAAAAGATTTCATAGAATGCCTTAAGGTGTTAGA-GGGAGCACTTGGAGAGA</genome_strand>
        <mrna_strand>TTTCTTTTTCTTCATTCATACAACAAAAATGGCTAACGATGAAGTGATTCTGTTGGATTTTTGGCCTAGCATGTTTGGAATGAGGCTAAGGATTGCACTTGCTGAGAAAGAGATTAAATATGAGTACAGAGA-CGAGGATTTGAGGAACAAAAGTCCTCTGCTTTTGCAGATGAATCCTATTCACAAGAAAATCCCTGTTTTGATTCATAATGGCAAACCAATTTGCGAGTCTATTATTGGAGTTGAGTATATTGATGAAGTGTGGAAGGATAAAGCCCCTTTCCTCCCTTCTGATCCTTATGAGAGAGCACAAGCTAGGTTTTGGGCTGATTACATTGATAAGAAGGTAAATTCATAGTCCCTCTGTTTCAGTTAAGACGGTAAGTAACTATTCTCTTTTGGTTTGTTGAAATTTTCAGTTGTATGATTCTGGGAGGAAGCTATGGACAACAAAGGGAGAAGAGCAAGAGACAGCTAAAAAAGATTTCATAGAATGCCTTAAGGTGTTAGAGGGGAGCACTTGGAGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-98Fe43/lycopersicum_combined_unigene_seqs" ref_id="SGN-U313390" ref_strand="+" ref_description="SGN-U313390        Tomato 200607 #1 [8 ESTs aligned] arabidopsis/peptide: | Symbol: None | glutathione S-transferase, putative, similar to glutathione transferase GI:2853219 from (Carica papaya) | chr1:29491306-29492799 REVERSE | Aliases: F3F9.11, F3F9_11(evalue: 2e-90, score=328) genbank/nr: gi|58578272|emb|CAI48072.1| glutathione S-transferase/peroxidase [Capsicum chinense] (evalue: 2e-109, score=398)">
      <seq>agaactagtctcgagtttttatttctttcttgtttattcatatatcaaaaatggctaacaatgaggtgattttgttggatttttggcctagcatgtttggcttgaggctgaggattgcacttgctgaaaaagaggttaaatatgagtacagagaagaggatttgccgaacaaaagccctctgcttttgcagatgaaccctattcacaagaaaatccctgttttgattcacaatggtaaaccgatttgtgagtctattattggagttgagtatattgatgaagtttggaaggataaagcccctttgctcccttctgatccttatgagagggcacaagctaggttttgggctgactacattgacaagaagttttattgggcttcaaggaagctgtggacaacaaaaggagaagagctggacgcagctaaggaagagttcatagtatgcctcaaagttctggagggagcactaggagacaagccttattttggaggggataactttggttttgtggatattgctctcattgggttctactgttggtttagtgcctatgagacttacggtaacttcagcacagaggctgagagcccaaagtttgtcgcttgggccaagaggtgtatgcagagggacagtgtggctaagtcttcgcccgaccaacataaggtcctcgagtttgtgaaagttgttaggcagaggcttggaattgaataaaaatatgcttatgcaattatgcatcataatgtattgaaaaaaggcacttcattgtgccttcttgtgttgttgtttcaagactttaaaatgtttgtttggtcatagtgtaagttctacttgcacttgtaataaaggagtcttagcctgtgactttgtttagtgtggcttttgttgtccttgtatgtaattgtggagcttctcctctttgtaatgataagtaattaattcttcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0220H02-y5Yru/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0220H02.1" temp_strand="-" temp_description="C07HBa0220H02.1  AC212638.1 htgs_phase:1 submitted_to_sgn_as:gi|158262133|gb|AC212638.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0220H02, *** SEQUENCING IN PROGRESS ***, 9 unordered pieces">
        <position start="32420" stop="30196"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32137" g_stop="31769" g_length="369"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="368" r_length="368" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31768" i_stop="31073" i_length="696">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31072" g_stop="30496" g_length="577"/>
          <reference_exon_boundary r_type="cDNA" r_start="369" r_stop="945" r_length="577" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="946" polyA_stop="955"/>
      <MATCH_line gen_id="C07HBa0220H02.1" gen_strand="-" ref_id="SGN-U313390" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>946</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0220H02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U313390" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32137" e_stop="31769"/>
          <exon e_start="31072" e_stop="30496"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAATCAGTACTAGCAATTTTATTTCTTTCTTGTTTATTCATATATCAAAAATGGCTAACAATGAGGTGATTTTGTTGGATTTTTGGCCTAGCATGTTTGGCTTGAGGCTGAGGATTGCACTTGCTGAAAAAGAGGTTAAATATGAGTACAGAGAAGAGGATTTGCCGAACAAAAGCCCTCTGCTTTTGCAGATGAACCCTATTCACAAGAAAATCCCTGTTTTGATTCACAATGGTAAACCGATTTGTGAGTCTATTATTGGAGTTGAGTATATTGATGAAGTTTGGAAGGATAAAGCCCCTTTGCTCCCTTCTGATCCTTATGAGAGGGCACAAGCTAGGTTTTGGGCTGACTACATTGACAAGAAGGTAAATTTTATTAGTTTTTTTAAGGCCGATTTGATACTAAGTTGGGATTGAAGCATTGTTGTATTATTTGATTTGTTTCACATTGGTTGGTTGAGAGTGAAATGTTGTTTTCTTAATTGTGTTTGTCAATGGTGACCTAATGAGATTAGCTTTTGGGCTTAGATTAGGTGATCATCATCTTGGGCGTGGTGGTGTTATTAGAGTTTCACATTAGTTGTAGAAATGAAATAGTCTCGTTGTCTTTTCGTTATGAAATTTGAAAAAGAAGTACTTTGTTTCCAAACTGAAAAATGAGATTTGAAAATTGGAGTTGTGTTTGATCAAACGCCTTGTTATCCTCATTTCATACGCTAGGATTCCCCCCCTACTCCAGATGATTAATTTTAGGCGTGTGGTGTGTCAGAGTTTCACCTTGGTCGATGAAATGGAAATTTATCTTATTATAGAGTTAATCCTTATTTCATAAGGTATGTTCCCTGCTCCAGATGTTCAGTCCTAAGTGCGGTGTTGTTAGAGTTTCACATTAATTGAAAAATTGGAATTATGTCTTGTTATGTAGTATTGCTTAATCCTCACTTATTTTTCGCTAGCGTCTAATGTCCATTTTCCATGAACTGACTATGACTTTTATTTTAGTTTTTGTGTCAACAAGTGATGATGACCTGTTTCTTTTTCTGCATTTGTTGAAATTTTCAGTTTTATTGGGCTTCAAGGAAGCTGTGGACAACAAAAGGAGAAGAGCTGGACGCAGCTAAGGAAGAGTTCATAGTATGCCTCAAAGTTCTGGAGGGAGCACTAGGAGACAAGCCTTATTTTGGAGGGGATAACTTTGGTTTTGTGGATATTGCTCTCATTGGGTTCTACTGTTGGTTTAGTGCCTATGAGACTTACGGTAACTTCAGCACAGAGGCTGAGAGCCCAAAGTTTGTCGCTTGGGCCAAGAGGTGTATGCAGAGGGACAGTGTGGCTAAGTCTTCGCCCGACCAACATAAGGTCCTCGAGTTTGTGAAAGTTGTTAGGCAGAGGCTTGGAATTGAATAAAAATATGCTTATGCAATTATGCATCATAATGTATTGAAAAAAGGCACTTCATTGTGCCTTCTTGTGTTGTTGTTTCAAGACTTTAAAATGTTTGTTTGGTCATAGTGTAAGTTCTACTTGCACTTGTAATAAAGGAGTCTTAGCCTGTGACTTTGTTTAGTGTGGCTTTTGTTGTCCTTGTATGTAATTGTGGAGCTTCTCCTCTTTGTAATGATAAGTAATTAATTCTTCA</genome_strand>
        <mrna_strand>AGAACTAGT-CTCGAGTTTTTATTTCTTTCTTGTTTATTCATATATCAAAAATGGCTAACAATGAGGTGATTTTGTTGGATTTTTGGCCTAGCATGTTTGGCTTGAGGCTGAGGATTGCACTTGCTGAAAAAGAGGTTAAATATGAGTACAGAGAAGAGGATTTGCCGAACAAAAGCCCTCTGCTTTTGCAGATGAACCCTATTCACAAGAAAATCCCTGTTTTGATTCACAATGGTAAACCGATTTGTGAGTCTATTATTGGAGTTGAGTATATTGATGAAGTTTGGAAGGATAAAGCCCCTTTGCTCCCTTCTGATCCTTATGAGAGGGCACAAGCTAGGTTTTGGGCTGACTACATTGACAAGAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTATTGGGCTTCAAGGAAGCTGTGGACAACAAAAGGAGAAGAGCTGGACGCAGCTAAGGAAGAGTTCATAGTATGCCTCAAAGTTCTGGAGGGAGCACTAGGAGACAAGCCTTATTTTGGAGGGGATAACTTTGGTTTTGTGGATATTGCTCTCATTGGGTTCTACTGTTGGTTTAGTGCCTATGAGACTTACGGTAACTTCAGCACAGAGGCTGAGAGCCCAAAGTTTGTCGCTTGGGCCAAGAGGTGTATGCAGAGGGACAGTGTGGCTAAGTCTTCGCCCGACCAACATAAGGTCCTCGAGTTTGTGAAAGTTGTTAGGCAGAGGCTTGGAATTGAATAAAAATATGCTTATGCAATTATGCATCATAATGTATTGAAAAAAGGCACTTCATTGTGCCTTCTTGTGTTGTTGTTTCAAGACTTTAAAATGTTTGTTTGGTCATAGTGTAAGTTCTACTTGCACTTGTAATAAAGGAGTCTTAGCCTGTGACTTTGTTTAGTGTGGCTTTTGTTGTCCTTGTATGTAATTGTGGAGCTTCTCCTCTTTGTAATGATAAGTAATTAATTCTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-98Fe43/lycopersicum_combined_unigene_seqs" ref_id="SGN-U313389" ref_strand="+" ref_description="SGN-U313389        Tomato 200607 #1 [6 ESTs aligned] arabidopsis/peptide: | Symbol: None | glutathione S-transferase, putative, Second of three repeated putative glutathione transferases. 72% identical to glutathione transferase (Arabidopsis thaliana) (gi:4006934). Location of ests 191A10T7 (gb:R90188) and 171N13T7 (gb:R65532) | chr1:5872142-5873079 FORWARD | Aliases: F20D23.12, F20D23_12(evalue: 4e-39, score=158) genbank/nr: gi|58578272|emb|CAI48072.1| glutathione S-transferase/peroxidase [Capsicum chinense] (evalue: 2e-45, score=185)">
      <seq>cggccaaatcggccgaattgatacttcaacatgtttagtcctacgcgtgtagggtattaaagtttcagacaagtaaaaatgaaagtgttaatccacacttcataaactagtgttctccctactccagatgctcaatcctaggtcccagatccaaatgctcaatcctagttgtgttagagtttcactagtgttgtctaagttgtatgtttctgcaagaaagatatggggaacaaagggagaagagcaggaggcaggtaagaaagatttcatagaagtacttaaagtgttggagggagaacttggagagaagccttattttggaggagataattttggttttgtggatattgctttgattgggttctatagctggttttatgcttatgagacttatggtaacttcagcgcagaggctgagtgtccaaagtttgtggcttgggctaagaggtgcatgcaaagggacagtgtggccaagtctttgcctgaccaacataaggtccttgagtttatacaaatgctaaggcggaagtttggaattgaataaacatatgcataataatgtgtatttgaataaagcacttcattttgccttgttgagttgtttcaagatttgaaattgtttgttcttttggtcatagtgtaagttctgcttttacttttgaattttgtgtcttcatctgaacttgttactttgactggatgattgatatgagtgatttgatgtttggttttgcgattattgcatcataatgatttgctttttttttaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0220H02-y5Yru/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0220H02.1" temp_strand="-" temp_description="C07HBa0220H02.1  AC212638.1 htgs_phase:1 submitted_to_sgn_as:gi|158262133|gb|AC212638.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0220H02, *** SEQUENCING IN PROGRESS ***, 9 unordered pieces">
        <position start="40566" stop="12842"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40266" g_stop="40087" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="199" r_length="179" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40086" i_stop="39982" i_length="105">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="39981" g_stop="39405" g_length="577"/>
          <reference_exon_boundary r_type="cDNA" r_start="200" r_stop="776" r_length="577" r_score="0.998"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="39404" i_stop="38012" i_length="1393">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="38011" g_stop="37997" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="777" r_stop="791" r_length="15" r_score="0.800"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0220H02.1" gen_strand="-" ref_id="SGN-U313389" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>772</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0220H02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U313389" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40266" e_stop="40087"/>
          <exon e_start="39981" e_stop="39405"/>
          <exon e_start="38011" e_stop="37997"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATACTTCAAACATGTTTAGTCCTACGCGTGTAGGGTATTAAAGTTTCAGACAAGTAAAAATGAAAGTGTTAATCCACACTTCATAAACTAGTGTTCTCCCTACTCCAGATGCTCAATCCTAGGTCCCAGATCCAAATGCTCAATCCTAGTTGTGTTAGAGTTTCACTAGTGTTGTCTAAGGTCCATTTTCTTAACATGAACCTGACTAGGGCTTTTATTTTAGTTTTGTGGCAATTAACAAGTGATAACTTCTTTTCTTTTTCTGTGTTTGTTTGAAATTTTCAGTTGTATGTTTCTGCAAGAAAGATATGGGGAACAAAGGGAGAAGAGCAGGAGGCAGGTAAGAAAGATTTCATAGAAGTACTTAAAGTGTTGGAGGGAGAACTTGGAGAGAAGCCTTATTTTGGAGGAGATAATTTTGGTTTTGTGGATATTGCTTTGATTGGGTTCTATAGCTGGTTTTATGCTTATGAGACTTATGGTAACTTCAGCGCAGAGGCTGAGTGTCCAAAGTTTGTGGCTTGGGCTAAGAGGTGCATGCAAAGGGACAGTGTGGCCAAGTCTTTGCCTGACCAACATAAGGTCCTTGAGTTTATACAAATGCTAAGGCGGAAGTTTGGAATTGAATAAACATATGCATAATAATGTGTATTTGAATAAAGCACTTCATTTTGCCTTGTTGAGTTGTTTCAAGATTTGAAATTGTTTGTTCTTTTGGTCATAGTGTAAGTTCTGCTTTTACTTTTGAATTTTGTGTCTTCATCTGAACTTGTTACTTTGACTGGATGATTGATATGAGTGATTTGATGTTTGGTTTTGCGATTATTGCATCATAATGATTTGCTTTTTTTTTAAAAAAAAGGTTCTTTGATTTGTGCCTTTTTGAGTTGTAATTTCAATGTTTGAAATCTTTTTTAGGCCAAATTTTTTCTTTTTTACCTTTCCGTAGGAGCTTCTATCCTTTTGATCCGAACTCATAACTTTCGAGTTGAAAGTGAAGAGTACTTACCATCTGAACAACTCTCTCTTATCGACTATAGTGTAAGTGATCAGTTTTAAAGTTTTAAATGACTGGCTAAACTCTAAATAAAGTTGAACTTTTGATTGAAATCTAAATAGCAACCCTAAAAGGACTATCCATGTACTCCCAGAAAGGGGAGACAAGGAAGAAGACTGGGAGTTGGAAGTTACACCCAAGGATCCTCAAAAGTCTGGAACTTGTTACATTTGAATTTTCTTTTGTGAAAATTACGACTCTTCATTATTAAATTATGAGATATAATTTATTAGTAATGACGTTGTGGTTGAGAATGATGAGTGAGTTATATAAATAATAATATTGTATAATACTAATGATAGTCAATAATAATGAACAATTGACAATAATGATAAAGGAATGAAATTTGATGTACTACTCTTTTTATCAAAACCAATCTAGTCAAGTAATTTGGATTGAAGTTTAAGAAGGTTATTATTTTTAAAATTTATGATTATAAAATTACAACGCTTATATGAATATAATATTTTCACACCATGTGACGAAAGCGGTGACCAGTAGACTAATTATTACGGAACATATTATAAAGTAGTACGATGAAGTATATAATGAAAAATAATGGACCACGTGACGAAAGCAATTTAAATCTATAGTCTATAATTAGACTTTTAATGAAAATTCTAAAATATTATCGACCTCGAGATACTCTTTTGATTTATGTAAAAATATTTAATTTGACATAATATTTGAGAATGTGAAAATTTATTATTTGAAATAAGTTATACATATTTTATAAAAAAATAGATCTAATGATCTTAAAATTAAGTAGTCTTGAATTTTTTTTATCCGCGTGCTATATGAATAAACATCCTAGATTTAAAAAAATCAAAACTGGTTAAATTCGAAATTTTACCCAAAAAGACAAATCAGGTTAAAAGTTCAAGATCATATATATGCCTTCAAAACCAATAATGTAAATCACTTAGATATTTACACGACTAAAAATTAATTTCATCAAATATAAGTTGAGATTGACTGAGAAGGAAATAGTATACTTTTTCCGTTTTAAAAAGATTGCTTAGTTTGATTTGGAACGGAATTTAAGAAAAGAAATAAGACTTTTTAATCTTGTGGTTCTAAATTAAAGTTATGTCAAATGTACCAAAATACCCTTTAGTCTTGTGGTATTAAACATGTCACGTGGAAAGTTAAAGTTAAAGTGTTGTCAAAAAAGTAAAGAGATCATTCTTTTTGAAACAAATTAAAAAAAAAT</genome_strand>
        <mrna_strand>ATACTTCAA-CATGTTTAGTCCTACGCGTGTAGGGTATTAAAGTTTCAGACAAGTAAAAATGAAAGTGTTAATCCACACTTCATAAACTAGTGTTCTCCCTACTCCAGATGCTCAATCCTAGGTCCCAGATCCAAATGCTCAATCCTAGTTGTGTTAGAGTTTCACTAGTGTTGTCTAAG.........................................................................................................TTGTATGTTTCTGCAAGAAAGATATGGGGAACAAAGGGAGAAGAGCAGGAGGCAGGTAAGAAAGATTTCATAGAAGTACTTAAAGTGTTGGAGGGAGAACTTGGAGAGAAGCCTTATTTTGGAGGAGATAATTTTGGTTTTGTGGATATTGCTTTGATTGGGTTCTATAGCTGGTTTTATGCTTATGAGACTTATGGTAACTTCAGCGCAGAGGCTGAGTGTCCAAAGTTTGTGGCTTGGGCTAAGAGGTGCATGCAAAGGGACAGTGTGGCCAAGTCTTTGCCTGACCAACATAAGGTCCTTGAGTTTATACAAATGCTAAGGCGGAAGTTTGGAATTGAATAAACATATGCATAATAATGTGTATTTGAATAAAGCACTTCATTTTGCCTTGTTGAGTTGTTTCAAGATTTGAAATTGTTTGTTCTTTTGGTCATAGTGTAAGTTCTGCTTTTACTTTTGAATTTTGTGTCTTCATCTGAACTTGTTACTTTGACTGGATGATTGATATGAGTGATTTGATGTTTGGTTTTGCGATTATTGCATCATAATGATTTGCTTTTTTTTTAAAAAAAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-98Fe43/lycopersicum_combined_unigene_seqs" ref_id="SGN-U330238" ref_strand="+" ref_description="SGN-U330238        Tomato 200607 #1 [2 ESTs aligned]">
      <seq>aggaattagagaagagggttaaggaaatgattgagaaagccgcagagttggagaagaaattgatggagaaggaaaggattattgctgaaagatttgttgctagcaatattaatggcattcctgtgggtgatgatagcgttggttttcttggtggtgatgtaaacttgccagtggttgctgcatcatctgttgtcgcagttgcagtgattggcgttatttgctatcttcgatacggacgaaaagcgtaaacccttagcttgatcttcaataagttttagtctttttggttttgtgctgatcaagctttggaatttacagttttgatagttctttggttatgttggattattagttaactttttgatcataatcagataatagattacactattatggtgctgaaatatgtttgtttgttaagctggagatagttgacatacttgtaatagtgcttctttctcatttctatgaatttgattacaatggttttgtagttctttccttggtgatgtaattgcttataagagttgctgaatctgtatgttatagtgtgtttaagtcgaatgattgaattgctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0220H02-y5Yru/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0220H02.1" temp_strand="+" temp_description="C07HBa0220H02.1  AC212638.1 htgs_phase:1 submitted_to_sgn_as:gi|158262133|gb|AC212638.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0220H02, *** SEQUENCING IN PROGRESS ***, 9 unordered pieces">
        <position start="54774" stop="55951"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55074" g_stop="55651" g_length="578"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="578" r_length="578" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0220H02.1" gen_strand="+" ref_id="SGN-U330238" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>578</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0220H02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U330238" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55074" e_stop="55651"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAATTAGAGAAGAGGGTTAAGGAAATGATTGAGAAAGCCGCAGAGTTGGAGAAGAAATTGATGGAGAAGGAAAGGATTATTGCTGAAAGATTTGTTGCTAGCAATATTAATGGCATTCCTGTGGGTGATGATAGCGTTGGTTTTCTTGGTGGTGATGTAAACTTGCCAGTGGTTGCTGCATCATCTGTTGTCGCAGTTGCAGTGATTGGCGTTATTTGCTATCTTCGATACGGACGAAAAGCGTAAACCCTTAGCTTGATCTTCAATAAGTTTTAGTCTTTTTGGTTTTGTGCTGATCAAGCTTTGGAATTTACAGTTTTGATAGTTCTTTGGTTATGTTGGATTATTAGTTAACTTTTTGATCATAATCAGATAATAGATTACACTATTATGGTGCTGAAATATGTTTGTTTGTTAAGCTGGAGATAGTTGACATACTTGTAATAGTGCTTCTTTCTCATTTCTATGAATTTGATTACAATGGTTTTGTAGTTCTTTCCTTGGTGATGTAATTGCTTATAAGAGTTGCTGAATCTGTATGTTATAGTGTGTTTAAGTCGAATGATTGAATTGCTT</genome_strand>
        <mrna_strand>AGGAATTAGAGAAGAGGGTTAAGGAAATGATTGAGAAAGCCGCAGAGTTGGAGAAGAAATTGATGGAGAAGGAAAGGATTATTGCTGAAAGATTTGTTGCTAGCAATATTAATGGCATTCCTGTGGGTGATGATAGCGTTGGTTTTCTTGGTGGTGATGTAAACTTGCCAGTGGTTGCTGCATCATCTGTTGTCGCAGTTGCAGTGATTGGCGTTATTTGCTATCTTCGATACGGACGAAAAGCGTAAACCCTTAGCTTGATCTTCAATAAGTTTTAGTCTTTTTGGTTTTGTGCTGATCAAGCTTTGGAATTTACAGTTTTGATAGTTCTTTGGTTATGTTGGATTATTAGTTAACTTTTTGATCATAATCAGATAATAGATTACACTATTATGGTGCTGAAATATGTTTGTTTGTTAAGCTGGAGATAGTTGACATACTTGTAATAGTGCTTCTTTCTCATTTCTATGAATTTGATTACAATGGTTTTGTAGTTCTTTCCTTGGTGATGTAATTGCTTATAAGAGTTGCTGAATCTGTATGTTATAGTGTGTTTAAGTCGAATGATTGAATTGCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-98Fe43/lycopersicum_combined_unigene_seqs" ref_id="SGN-U327107" ref_strand="+" ref_description="SGN-U327107        Tomato 200607 #1 [4 ESTs aligned]">
      <seq>agctttcttcttcttttctctgtgaaaatgcaaaattctcactcgttgtgaatctgtggattagggtttgtatcatcagggccatggcaatgctgctgccttttctcccaaggccaagtaggatttaatcttgctccagaagttttgaggtattcaactgcaaaaccaagttgaatttactggtccttttgcttttctgaagcatgtaaccctgaacccctaagtacattgtacttagttagggaatgaagccatcggtccgtatagcatataaatctttgtaattataaagaagaaaatttcttttgcatattccagtttttctttctctgaattttgtcctatttattcaaattctgttgcttaatcagtgcaaaagcattgttgtacatttaaacaatataatatccttttagacctttcatcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0220H02-y5Yru/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0220H02.1" temp_strand="+" temp_description="C07HBa0220H02.1  AC212638.1 htgs_phase:1 submitted_to_sgn_as:gi|158262133|gb|AC212638.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0220H02, *** SEQUENCING IN PROGRESS ***, 9 unordered pieces">
        <position start="57343" stop="58889"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57643" g_stop="57754" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="112" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57755" i_stop="58266" i_length="512">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58267" g_stop="58591" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="113" r_stop="437" r_length="325" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0220H02.1" gen_strand="+" ref_id="SGN-U327107" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>437</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0220H02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U327107" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57643" e_stop="57754"/>
          <exon e_start="58267" e_stop="58591"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTTTCTTCTTCTTTTCTCTGTGAAAATGCAAAATTCTCACTCGTTGTGAATCTGTGGATTAGGGTTTGTATCATCAGGGCCATGGCAATGCTGCTGCCTTTTCTCCCAAGGTATTCTTTTCTTCATTTTTGGTTAATAAAATCATTAATTGAGTTCTTTTTGATGTTTTACAATTTGGGTCTTTTTGTTTTGCTCTTAAGTTTCTGAAAAATGTTACTTTTTTCTTTATCTCCCAATTCATTCTTGACAATCCATACAGAAAGATTGTTTTTTTAACCTCTAGTGTGAAGAATTTACAGAGTTAAAAATAGTAATTCTGATTGTGTAATGATTAAAAGTAAAAATGCTCCCTGTGTTGATCGTCTTTCTAATTTCGTAATTTTCTTTACAAAATGGAGAATTCGAAGAGCCAAAACGATAGGTTATGTGTTATCCATGTGTGCACAACTACGATACATGCGCTTAGCTCAACCCGGTGAGGTGCTTATACTCTCTGTGTACTTTGAACCAATCTAGAGGTGTTACAATGGGCCGGCTTTATGTCTGCTTGATGTAATTTGTAAATGAAGTGTTCCTTCTCAACTGTCGATGTCATTTCTTATTTGTTTTTCTACTTCTGCAGGCCAAGTAGGATTTAATCTTGCTCCAGAAGTTTTGAGGTATTCAACTGCAAAACCAAGTTGAATTTACTGGTCCTTTTGCTTTTCTGAAGCATGTAACCCTGAACCCCTAAGTACATTGTACTTAGTTAGGGAATGAAGCCATCGGTCCGTATAGCATATAAATCTTTGTAATTATAAAGAAGAAAATTTCTTTTGCATATTCCAGTTTTTCTTTCTCTGAATTTTGTCCTATTTATTCAAATTCTGTTGCTTAATCAGTGCAAAAGCATTGTTGTACATTTAAACAATATAATATCCTTTTAGACCTTTCATCAAAGGAAGAGC</genome_strand>
        <mrna_strand>AGCTTTCTTCTTCTTTTCTCTGTGAAAATGCAAAATTCTCACTCGTTGTGAATCTGTGGATTAGGGTTTGTATCATCAGGGCCATGGCAATGCTGCTGCCTTTTCTCCCAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGTAGGATTTAATCTTGCTCCAGAAGTTTTGAGGTATTCAACTGCAAAACCAAGTTGAATTTACTGGTCCTTTTGCTTTTCTGAAGCATGTAACCCTGAACCCCTAAGTACATTGTACTTAGTTAGGGAATGAAGCCATCGGTCCGTATAGCATATAAATCTTTGTAATTATAAAGAAGAAAATTTCTTTTGCATATTCCAGTTTTTCTTTCTCTGAATTTTGTCCTATTTATTCAAATTCTGTTGCTTAATCAGTGCAAAAGCATTGTTGTACATTTAAACAATATAATATCCTTTTAGACCTTTCATCAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-98Fe43/lycopersicum_combined_unigene_seqs" ref_id="SGN-U345018" ref_strand="+" ref_description="SGN-U345018        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | RNase H domain-containing protein, low similarity to reverse transcriptase (Arabidopsis thaliana) GI:976278; contains Pfam profile PF00075: RNase H | chr2:9503156-9504121 FORWARD | Aliases: F14M13.25, F14M13_25(evalue: 2e-13, score=73.2) genbank/nr: unnamed(evalue: 3e-19, score=99)">
      <seq>ttagcactcgtatttccattcgattacatcttagtagtaagtagataaagccaaatctaataagaatggcaatgttcatgcctaattttaacctacaacatgatcccatttccacgacacaaaacacaactcaatattgtcaccttcgatcaacaatcgaaaaacgaaattccccgtttttagttagttggtctttccctcctccggggtacgtgaaaatcaacacagatggcagttttatgcctaaatcaggagaagcgggatacggagtcattgcgcgtgatgacaaaggaatgtggctaggtggattctatggtcgacttgatacgaagtcaacgtcgagtctgaccccagagttgtgggctattcacgaggccctaagacaagtcaaacattgcaacttgaaaaaagtgattattgaaaccgactcgaatgaggccttgatgttgataagtcgtgccaaaaaagtagatgcaaatcaccctgatcataaggtgatagaagattgtaggattctattgtctgaggtcgagacatgtctaattcatacgttgagacaaggtaataactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0220H02-y5Yru/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0220H02.1" temp_strand="-" temp_description="C07HBa0220H02.1  AC212638.1 htgs_phase:1 submitted_to_sgn_as:gi|158262133|gb|AC212638.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0220H02, *** SEQUENCING IN PROGRESS ***, 9 unordered pieces">
        <position start="60986" stop="59816"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60686" g_stop="60116" g_length="571"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="571" r_length="571" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0220H02.1" gen_strand="-" ref_id="SGN-U345018" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>571</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0220H02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U345018" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60686" e_stop="60116"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGCACTCGTATTTCCATTCGATTACATCTTAGTAGTAAGTAGATAAAGCCAAATCTAATAAGAATGGCAATGTTCATGCCTAATTTTAACCTACAACATGATCCCATTTCCACGACACAAAACACAACTCAATATTGTCACCTTCGATCAACAATCGAAAAACGAAATTCCCCGTTTTTAGTTAGTTGGTCTTTCCCTCCTCCGGGGTACGTGAAAATCAACACAGATGGCAGTTTTATGCCTAAATCAGGAGAAGCGGGATACGGAGTCATTGCGCGTGATGACAAAGGAATGTGGCTAGGTGGATTCTATGGTCGACTTGATACGAAGTCAACGTCGAGTCTGACCCCAGAGTTGTGGGCTATTCACGAGGCCCTAAGACAAGTCAAACATTGCAACTTGAAAAAAGTGATTATTGAAACCGACTCGAATGAGGCCTTGATGTTGATAAGTCGTGCCAAAAAAGTAGATGCAAATCACCCTGATCATAAGGTGATAGAAGATTGTAGGATTCTATTGTCTGAGGTCGAGACATGTCTAATTCATACGTTGAGACAAGGTAATAACTG</genome_strand>
        <mrna_strand>TTAGCACTCGTATTTCCATTCGATTACATCTTAGTAGTAAGTAGATAAAGCCAAATCTAATAAGAATGGCAATGTTCATGCCTAATTTTAACCTACAACATGATCCCATTTCCACGACACAAAACACAACTCAATATTGTCACCTTCGATCAACAATCGAAAAACGAAATTCCCCGTTTTTAGTTAGTTGGTCTTTCCCTCCTCCGGGGTACGTGAAAATCAACACAGATGGCAGTTTTATGCCTAAATCAGGAGAAGCGGGATACGGAGTCATTGCGCGTGATGACAAAGGAATGTGGCTAGGTGGATTCTATGGTCGACTTGATACGAAGTCAACGTCGAGTCTGACCCCAGAGTTGTGGGCTATTCACGAGGCCCTAAGACAAGTCAAACATTGCAACTTGAAAAAAGTGATTATTGAAACCGACTCGAATGAGGCCTTGATGTTGATAAGTCGTGCCAAAAAAGTAGATGCAAATCACCCTGATCATAAGGTGATAGAAGATTGTAGGATTCTATTGTCTGAGGTCGAGACATGTCTAATTCATACGTTGAGACAAGGTAATAACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-98Fe43/lycopersicum_combined_unigene_seqs" ref_id="SGN-U323479" ref_strand="+" ref_description="SGN-U323479        Tomato 200607 #1 [6 ESTs aligned] arabidopsis/peptide: | Symbol: None | endoplasmic reticulum oxidoreductin 1 (ERO1) family protein, contains Pfam domain, PF04137: Endoplasmic Reticulum Oxidoreductin 1 (ERO1) | chr1:27215513-27218168 REVERSE | Aliases: T9N14.18, T9N14_18(evalue: 2e-110, score=395) genbank/nr: gi|15218421|ref|NP_177372.1| disulfide bond formation protein -related [Arabidopsis thaliana] gi|25353049|pir||E96746 hypothetical protein T9N14.18 [imported] - Arabidopsis thaliana gi|12323665|gb|AAG51798.1| disulfide bond formation protein, putative; 78451-75984 [Arabidopsis thaliana] gi|31711714|gb|AAP68213.1| At1g72280 [Arabidopsis thaliana](evalue: 1e-108, score=395)">
      <seq>cggagcgttacactggctacactggtccctcggccaggcgaatatgggatgctatatactcggagaattgtccaaaatatgcatctggagagatttgccaggagaaaaaggttttatacaaacttatatctggtctccactcctcaatctcaatacacatagctgctgattacctgcttgatgaaactaaaaaccagtggggtacaaatccagatctgatgtatgatcgtgttctacaatatcctgaacgtgtccgaaacttgtattttactttcctctttgttctccgagctgtaacaaaagcaaaagattacttggagcaagctgagtatgatactggcaatcctgaggaagaccttaaagcacagtcccttattcgacagctactatacaaccccaaactgcaggctgcatgtccagttccgtttgacgaagctaaactgtggaaaggccaaagtggacctgagctaaagcagcagattcaaaagcaattcaggaatattagtgctctcatggattgtgtaggatgtgagaaatgtcgactgtggggaaagctccaggttcttggtcttggaactgcattaaagattctcttctcagttgatggtgaatatcgtcaagatcaacatctgcagttgcaaagaaatgaagtgattgctcttgtaaacctacttaatcggctatcagaatctatcaagctagtacaggaaatgagccctacatatgagaagacaatgaaggggctaagtctacagccagctgctaagtttataagttcgtggaatagactattgaaaactgtactaggagataggttgaggaagcttacatgatattgatataattttggtgtacaatgatgtaaagaatgaatacaactaaactattgaaaggtgagaagatttctacagccggatagcatacagggatacacggatttatcgcgggaacagtgttcgaaatttggaaatacagaatccattactaggtgaactggaaaattagtagtgttctgtcacttgatcatgtgtaactttgaaatgttgtaacattattgttgaaactatatctctgtgtttcctcaatgagaagtgacaattttgctcctaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0220H02-y5Yru/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0220H02.1" temp_strand="-" temp_description="C07HBa0220H02.1  AC212638.1 htgs_phase:1 submitted_to_sgn_as:gi|158262133|gb|AC212638.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0220H02, *** SEQUENCING IN PROGRESS ***, 9 unordered pieces">
        <position start="65881" stop="62106"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65581" g_stop="65504" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="78" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65503" i_stop="65290" i_length="214">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.919" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65289" g_stop="65171" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="197" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65170" i_stop="65005" i_length="166">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65004" g_stop="64900" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="302" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="64899" i_stop="64799" i_length="101">
            <donor d_prob="0.880" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="64798" g_stop="64596" g_length="203"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="505" r_length="203" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="64595" i_stop="64189" i_length="407">
            <donor d_prob="0.584" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="64188" g_stop="64065" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="506" r_stop="629" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="64064" i_stop="63952" i_length="113">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="63951" g_stop="63767" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="630" r_stop="814" r_length="185" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="63766" i_stop="62713" i_length="1054">
            <donor d_prob="0.740" d_score="1.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="62712" g_stop="62405" g_length="308"/>
          <reference_exon_boundary r_type="cDNA" r_start="815" r_stop="1122" r_length="308" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0220H02.1" gen_strand="-" ref_id="SGN-U323479" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>1122</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0220H02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U323479" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65581" e_stop="65504"/>
          <exon e_start="65289" e_stop="65171"/>
          <exon e_start="65004" e_stop="64900"/>
          <exon e_start="64798" e_stop="64596"/>
          <exon e_start="64188" e_stop="64065"/>
          <exon e_start="63951" e_stop="63767"/>
          <exon e_start="62712" e_stop="62405"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGAGCGTTACACTGGCTACACTGGTCCCTCGGCCAGGCGAATATGGGATGCTATATACTCGGAGAATTGTCCAAAATGTGAGTAAATGATGCTTTCAATTGGTTAGAACTATTTGTTTTACCAATTTTCTTATGAGTCGTATTCTTAGAATTACATTCAGAAGGGAGAGCTTTGAAATGTGTAAATACTTTCTTAAGCTAACCTTCCCCTTGTGGTGCAGTATTGTATTTGTTTACTATTATACGCATTATCATTGTGAATTGAACACAGAAGTTACAATTTTATGGGCAGATGCATCTGGAGAGATTTGCCAGGAGAAAAAGGTTTTATACAAACTTATATCTGGTCTCCACTCCTCAATCTCAATACACATAGCTGCTGATTACCTGCTTGATGAAACTAAAAACCAGGTTAGTTTGCATTTAATATGTAGCATGTTTCTATTATGGTTTGCCAGAAAATGGATAAATAACACTTGCTAAGTTTACAACAGCAGGGCGAACCTGTTACATTCACAAAATAATTCATTATGAATTGTGAACTATTCTAACTTGACTATTTTGCTGCAAATTTCAGTGGGGTACAAATCCAGATCTGATGTATGATCGTGTTCTACAATATCCTGAACGTGTCCGAAACTTGTATTTTACTTTCCTCTTTGTTCTCCGAGCTGTAACAAAAGTGAGTACTTGCTACATATGTCTATATTTTGGTAACTCCTCTAATGGTAACATTGTATAGATTTATTCATTGGGCTACTCCCTTCTTGATATGCTATACAGGCAAAAGATTACTTGGAGCAAGCTGAGTATGATACTGGCAATCCTGAGGAAGACCTTAAAGCACAGTCCCTTATTCGACAGCTACTATACAACCCCAAACTGCAGGCTGCATGTCCAGTTCCGTTTGACGAAGCTAAACTGTGGAAAGGCCAAAGTGGACCTGAGCTAAAGCAGCAGATTCAAAAGCAATTCAGGAATATTAGGTTTCAATTGAACTGTTCTCAATTTAATTTCGTAAATTCAGAAAAGAAAGGCCTAAAGGATGTTATGTTGCTTATACATGCTGGCACCCCCTTTGGACTCTATTTTGAGTTGACTGCATCAGTACATTTATATTTCAGTCTATGTATTCAAATGTATGCAAATCCCATTTTCTTTAAGCATATAGAAACCTATGATTCCAATTTGCATATGCTGCTGCTTTGGTGAGTTTAGTGATCATGGCTGGCTCACCTGGAAAGAATTGGGAAGATGTTCTTTTAGTGAGATGTTGTATTGTTGTTAACACCACAGAAAGAGCTGAAAATCTTGTGTATGCTGTTCAAAGTAGTTGTTGCTATGTACTTGAGCATATGACTGAACAATTTGTTATTCACTTTTCATGTTGCAGTGCTCTCATGGATTGTGTAGGATGTGAGAAATGTCGACTGTGGGGAAAGCTCCAGGTTCTTGGTCTTGGAACTGCATTAAAGATTCTCTTCTCAGTTGATGGTGAATATCGTCAAGATCAACATGTGAGTTTTCTTTATTCTTTTTTCATTTGCTGACCTCTCTCTCTGGAACAACTACATGTTATTCACAGCCAACTATGTTTCTTAGTCTCTCTCTCTTCTTATATATTTTACAGCTGCAGTTGCAAAGAAATGAAGTGATTGCTCTTGTAAACCTACTTAATCGGCTATCAGAATCTATCAAGCTAGTACAGGAAATGAGCCCTACATATGAGAAGACAATGAAGGGGCTAAGTCTACAGCCAGCTGCTAAGTTTATAAGTTCGTGGAATAGACTATTGAAAACTGTACTAGGAGATAGGTAAACACCACTCTCTTTTGTTTGTGATTAATGATTCAAATCCAAGGGTAAAGTGCATTACCAAACTTTGCCATTCTTACTTCTTAAAGCTTGAAACAAGATAAATTTAGATTTAACCTCTTTGACAAGTATCTGGTTATTATGTCAATATTTCTGTTGGCTGAAAATTGGAAAGAATGGTTTTTTAAAGTCTAGACCAAATTTCAATTTGTCAAATTATAAAAAGAGGAAGGAGGAATCAAAAACCTCCCCTCCGGTGCATCCATGATTCAACATCCACTCGTGTTTCTTTACCACTTTTAAAATATTTTTCGGGGCCAAGTAGTTTGATGCTATTGCTAATTATATGTGTTCTTGACAAAAACTTCTGCAATGACTCAAGCCCCTGAAAACTGAGAACTGATTGGAAGTTTCACATGTCACTCTTTGGAACTTCTCTAATATATTGCTGTCATTTCCAGGATCCTGAAAAGGAAGAATAAGACTGAGCTGATCTATTTGTAGTTCCATTTTCTTTTTTGATTTTTGTCTTTCGGAAACAGACTCTATCTCCACGAGGTAAGAGGAAGGTCTGTGTACATTCTACCCTCCCCAGACTCCACTTGTGGGGTCAAACAGGGTATGTTCTTGTGTTTTAGTTTATCGGGAACCATGCACACCGTTGTGTCGCGTCAAACACATTATACACTTTTTATTTACAAACATCTCATCGAGAATGCTAAAAAATCCATGTTCATTGATAATGTCTCTCCTACCACTTCCTCCCCATGCAATCACTTGTTTATGAAGATAAGTAGTTCATGACACAGAATTTTGATCTTTCCCTAGAGAACCCTTTTCCTCCCAAAAGCAAATATTGAGTTCATTATTGCTAGTGTTTTCTTTGTACTTCTTATGTGGGAATGGTTTGGAAAATAACATTTTATCGATGATGATCAAGTGGTAATGTGGGAAGAAGGGAATTAGCAACAGAATGCCATACAATTTGTTTAACTTCAAATTTTGATGATGAAGGTGAAGTGTCAGATTCTCATATTTGGTGTTCTATTTTCAGGTTGAGGAAGCTTACATGATATTGATATAATTTTGGTGTACAATGATGTAAAGAATGAATACAACTAAACTATTGAAAGGTGAGAAGATTTCTACAGCCGGATAGCATACAGGGATACACGGATTTATCGCGGGAACAGTGTTCGAAATTTGGAAATACAGAATCCATTACTAGGTGAACTGGAAAATTAGTAGTGTTCTGTCACTTGATCATGTGTAACTTTGAAATGTTGTAACATTATTGTTGAAACTATATCTCTGTGTTTCCTCAATGAGAAGTGACAATTTTGCTCCTAATATGAAGACAAT</genome_strand>
        <mrna_strand>CGGAGCGTTACACTGGCTACACTGGTCCCTCGGCCAGGCGAATATGGGATGCTATATACTCGGAGAATTGTCCAAAAT......................................................................................................................................................................................................................ATGCATCTGGAGAGATTTGCCAGGAGAAAAAGGTTTTATACAAACTTATATCTGGTCTCCACTCCTCAATCTCAATACACATAGCTGCTGATTACCTGCTTGATGAAACTAAAAACCAG......................................................................................................................................................................TGGGGTACAAATCCAGATCTGATGTATGATCGTGTTCTACAATATCCTGAACGTGTCCGAAACTTGTATTTTACTTTCCTCTTTGTTCTCCGAGCTGTAACAAAA.....................................................................................................GCAAAAGATTACTTGGAGCAAGCTGAGTATGATACTGGCAATCCTGAGGAAGACCTTAAAGCACAGTCCCTTATTCGACAGCTACTATACAACCCCAAACTGCAGGCTGCATGTCCAGTTCCGTTTGACGAAGCTAAACTGTGGAAAGGCCAAAGTGGACCTGAGCTAAAGCAGCAGATTCAAAAGCAATTCAGGAATATTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCTCATGGATTGTGTAGGATGTGAGAAATGTCGACTGTGGGGAAAGCTCCAGGTTCTTGGTCTTGGAACTGCATTAAAGATTCTCTTCTCAGTTGATGGTGAATATCGTCAAGATCAACAT.................................................................................................................CTGCAGTTGCAAAGAAATGAAGTGATTGCTCTTGTAAACCTACTTAATCGGCTATCAGAATCTATCAAGCTAGTACAGGAAATGAGCCCTACATATGAGAAGACAATGAAGGGGCTAAGTCTACAGCCAGCTGCTAAGTTTATAAGTTCGTGGAATAGACTATTGAAAACTGTACTAGGAGATAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGGAAGCTTACATGATATTGATATAATTTTGGTGTACAATGATGTAAAGAATGAATACAACTAAACTATTGAAAGGTGAGAAGATTTCTACAGCCGGATAGCATACAGGGATACACGGATTTATCGCGGGAACAGTGTTCGAAATTTGGAAATACAGAATCCATTACTAGGTGAACTGGAAAATTAGTAGTGTTCTGTCACTTGATCATGTGTAACTTTGAAATGTTGTAACATTATTGTTGAAACTATATCTCTGTGTTTCCTCAATGAGAAGTGACAATTTTGCTCCTAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-98Fe43/lycopersicum_combined_unigene_seqs" ref_id="SGN-U327845" ref_strand="+" ref_description="SGN-U327845        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | endoplasmic reticulum oxidoreductin 1 (ERO1) family protein, contains Pfam domain, PF04137: Endoplasmic Reticulum Oxidoreductin 1 (ERO1) | chr1:27215513-27218168 REVERSE | Aliases: T9N14.18, T9N14_18(evalue: 1e-64, score=243) genbank/nr: Endoplasmic(evalue: 4e-67, score=257)">
      <seq>attcatcggttcttcaaatataacggcttcgattctgcgaatgaacagtagttgacactgaaagtcgtttcataattcaacgaataagagtttaattagtgtttttttgatttttttgggtcgaagattttaggggttttgtggaagaattgttgtgatggtggaagaaaatgaagttaacgagctgaagaagacggagaatgagaagaggagaagtgggtggcgattgggtcgatcagcaattgcagcgattttggtgttgatgatagcatttggtgtgacttttttgtatacagaggagggaaaatcatgtccttgttttcaggactctagaaaatatactgggatagttgaagactgttgttgtgattatgaaaccgttgacgctattaatggcgctgtgctgcatcctttactccaagggcttgttacaactcccttctttagatactttaaggttaagctgtggtgtgactgccctttttggcctgatgatggtatgtgtaagttacgagattgcagtgtatgcgaatgtccagaaactgagttccccgaatcttttaggagacctccacttggccttgctgctgatgatctgaaatgccaagagggaaaaccagaggcagctgttgaccgcactctcgactccaaggtttttatgggatggatagaggtagataatccttggacagttgatgatgaaacagataatggtgagatgacatatgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0220H02-y5Yru/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0220H02.1" temp_strand="-" temp_description="C07HBa0220H02.1  AC212638.1 htgs_phase:1 submitted_to_sgn_as:gi|158262133|gb|AC212638.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0220H02, *** SEQUENCING IN PROGRESS ***, 9 unordered pieces">
        <position start="68139" stop="65597"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67839" g_stop="67515" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="325" r_length="325" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="67514" i_stop="66757" i_length="758">
            <donor d_prob="0.901" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66756" g_stop="66625" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="457" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66624" i_stop="66168" i_length="457">
            <donor d_prob="0.906" d_score="1.00"/>
            <acceptor a_prob="0.952" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66167" g_stop="65912" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="458" r_stop="713" r_length="256" r_score="0.996"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="65911" i_stop="65615" i_length="297">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65614" g_stop="65598" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="714" r_stop="730" r_length="17" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0220H02.1" gen_strand="-" ref_id="SGN-U327845" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>730</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0220H02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U327845" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67839" e_stop="67515"/>
          <exon e_start="66756" e_stop="66625"/>
          <exon e_start="66167" e_stop="65912"/>
          <exon e_start="65614" e_stop="65598"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCATCGGTTCTTCAAATATAACGGCTTCGATTCTGCGAATTAACAGTAGTTGACACTGAAATTCGTTTCATAATTCAACGAATAAGAGTTTAATTAGTGTTTTTTTGATTTTTTTGGGTCGAAGATTTTAGGGGTTTTGTGGAAGAATTGTTGTGATGGTGGAAGAAAATGAAGTTAACGAGCTGAAGAAGACGGAGAATGAGAAGAGGAGAAGTGGGTGGCGATTGGGTCGATCAGCAATTGCAGCGATTTTGGTGTTGATGATAGCATTTGGTGTGACTTTTTTGTATACAGAGGAGGGAAAATCATGTCCTTGTTTTCAGGTTTTTTTCTTTTTCGCTCATTAAAATTAGGGTTTGTTTATCTTATTATTGTATAGTTTTGGTGTGATTAGAGAAATGTGAAGATTTTTATTGAAGTTTGTTGATCATTACTTGTTTAAATTCCTGGTAGAATGGAGAATCTTATAAAATTGTGAAACTGTAAATCAAATGCTTAATTGTGGGATTTTCTGATGTTGAAGTAAGTTTTGAGTTTGTACGAGTTGTTAAAACTGGAAATATCAATAGCCCATGTTGCATTAGTAATTCTTGTTGAATATGAGCATTTAGCTTTTGAAAAAAGTGTGCTGATCACTGTATTGTTTTGTTTTGGTGGGTGGATAAAGTTCCTTTCAATCCTGCTTTGATTGCGCTTCTTCTGAGGTGAGGGTGTACTTTTTCGAGGCCCCACTTGTGAAATTACACTGGGTATGTTGTTGTTTTTGTTGTTGGTGGTGGATAGCTAAACCATGATTGCTTTGGTACCAAAGTGGTATGGTTCTACGATGGAGTTATTAGGTTGTGTGTAAAAGTGTTTAATTCATAGTTTTGGTTTAGTTATTGATAATTGAGAAGACACTCCGGCTCGTGAGTATCTTCCCTAAATTTATATGAACAAGAATCTAGTTATTGGCAGAGCTGCTGGCGAAATTGATTTTTAGGAATCTCATGTTTACTGAAATTTTAAAAGATTGTGTATGCTTCTAGCTATTTGAATTATACAATTCTGACGGACTGTTTGCTTCTTGACCTTAATGCAGGACTCTAGAAAATATACTGGGATAGTTGAAGACTGTTGTTGTGATTATGAAACCGTTGACGCTATTAATGGCGCTGTGCTGCATCCTTTACTCCAAGGGCTTGTTACAACTCCCTTCTTTAGATACTTTAAGGTATGGTGCAAAATCTAACCAATATGAGGAATCTTACCAATTGATGATCGTATTTTCAATTGAATTGATGGTTTTAAAAAATTTCCTCTACATTCTTGTTCTAAAGTTGATTTGATTGCCAAGAGAGGAAAGAGATAGTGTCACAAAGTTAATTCTATTGAATTTTGCGGCATATGGTTATCCGGAAAGTTGTGGGCTAAGCAATTTAAAACTTATCCAACTGTGCCAAAAAAAAAAAGTAGGAAAACGGTTTCTTCTCCTTTAAAATCTTGCCTTTTCTTTCCAAACCTTTATGTACAAGAAAGTGACTTTTGAACTTGATGGACATCTTAAAGAAGCCTAAGGAAAAGTTTCTCTCATTTATTTTATAATAAGCCCAAAACTAAGGTCAATCATGCCTTCCTTCGAAATCGTGAAAAGGTGATTTGACAACTTGATGCATATCTAATGGCTGCAGGTTAAGCTGTGGTGTGACTGCCCTTTTTGGCCTGATGATGGTATGTGTAAGTTACGAGATTGCAGTGTATGCGAATGTCCAGAAACTGAGTTCCCCGAATCTTTTAGGAGACCTCCACTTGGCCTTGCTGCTGATGATCTGAAATGCCAAGAGGGAAAACCAGAGGCAGCTGTTGACCGCACTCTCGACTCCAAGGTTTTTAGGGGATGGATAGAGGTAGATAATCCTTGGACAGTTGATGATGAAACAGATAATGGTAATTGATCTATCTTTGTTAATACACAGAGGTTTTCCTTTCTACATTTTTGGAGTCTTGGTATATCTTTCGATCCTTTCCAAACTTTTGTTTGTGACTTCACCAATAAACAATTGTATGATCAGGCATAAGATGAAGCAATTTGTAGTTATTATCAATTTGAGTTGTATTGAAGTTCTTAAACTCAACGATTATATTGCATTGGGAGTTTAAAACTTATATAATGTCATGTATGATATCACTACTTCTTGAAGGTTTCTATTTAGAGTACTAAGTTGCTGAACTTCTTCCTTGCAGGTGAGATGACATATGTC</genome_strand>
        <mrna_strand>ATTCATCGGTTCTTCAAATATAACGGCTTCGATTCTGCGAATGAACAGTAGTTGACACTGAAAGTCGTTTCATAATTCAACGAATAAGAGTTTAATTAGTGTTTTTTTGATTTTTTTGGGTCGAAGATTTTAGGGGTTTTGTGGAAGAATTGTTGTGATGGTGGAAGAAAATGAAGTTAACGAGCTGAAGAAGACGGAGAATGAGAAGAGGAGAAGTGGGTGGCGATTGGGTCGATCAGCAATTGCAGCGATTTTGGTGTTGATGATAGCATTTGGTGTGACTTTTTTGTATACAGAGGAGGGAAAATCATGTCCTTGTTTTCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTCTAGAAAATATACTGGGATAGTTGAAGACTGTTGTTGTGATTATGAAACCGTTGACGCTATTAATGGCGCTGTGCTGCATCCTTTACTCCAAGGGCTTGTTACAACTCCCTTCTTTAGATACTTTAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAGCTGTGGTGTGACTGCCCTTTTTGGCCTGATGATGGTATGTGTAAGTTACGAGATTGCAGTGTATGCGAATGTCCAGAAACTGAGTTCCCCGAATCTTTTAGGAGACCTCCACTTGGCCTTGCTGCTGATGATCTGAAATGCCAAGAGGGAAAACCAGAGGCAGCTGTTGACCGCACTCTCGACTCCAAGGTTTTTATGGGATGGATAGAGGTAGATAATCCTTGGACAGTTGATGATGAAACAGATAATG.........................................................................................................................................................................................................................................................................................................GTGAGATGACATATGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-98Fe43/lycopersicum_combined_unigene_seqs" ref_id="SGN-U324515" ref_strand="+" ref_description="SGN-U324515        Tomato 200607 #1 [5 ESTs aligned] arabidopsis/peptide: AT3G14400.1 | Symbol: None | ubiquitin-specific protease 25 (UBP25), similar to GI:11993490 | chr3:4811539-4815504 REVERSE | Aliases: MLN21.18 (evalue: 8e-27, score=118) genbank/nr: gi|9279587|dbj|BAB01045.1| contains similarity to ubiquitin specific protease~gene_id:MLN21.18 [Arabidopsis thaliana](evalue: 7e-25, score=118)">
      <seq>gattctcaggtttctcctaaaatcttgcaagaagtgttgtcagaaaaggtgtacatccttttcttctctcgtaccaaacagaggtcaccatccaccaagacatgtttatcaattaatggatcaaaatccaatcactccaatggcttggctaaatccaaaatcttgaccagtgacttagcaaaaacagtaaacgaaaagcaagttttaggccacccctccgagaaagaaaatgtagtgatgtctaaggtcagtaaagtgcattcgagcccagtgcgagatttgggcatatttgaaaaatcttccttcaagagacctacctctggtaatatcaaaatggtttttcattcaaaagaatctggcaatagaactggtgatgtgagagcatcagttcttacagagaaaaagattacatcattatcaaacaagaatggtgttagcaaaagttgtggtaatggccaagggacaagatcacatgccttaacaaatggaaatggaaatggaaaacttccaattgtagcaaccagccctgtagcagacggtccccatgaagattatggtggaagtaatggaaaggctgcaggaaaggattcataccacaaagaggtgaatagatcatcatctttagcaaatggaaatggtaaaattcaaagtgttgcaacggataccttgaggggaagtctgcatagaaataatggggagaatagtgaaagcctggcagcaatatcttctgcatacagggatacatccaatggccatgttgaatcgtcttctatctcaggttcaaagagaaaatcaccagatcagtgcatcttgcttgagtatgatgttcagtctcgtgcaaaggtggaagaattaaaaaaagagctccatcaggaagcttcatcatttctaagaacatgtggttggtcagaagaagtttatgcttttatgcgttccaaaaagtcggggacacaatcaaactttcaagcatcagatgttaatgcgatgaaggagttgttgattgcagatgccaaatcaatgtttatctcacaaattcctcaatcattgaagggcagtcttattgaacgtttaacatcatttagtcaaggaacaccaccctccagtacctaagcacacttggacatgtccattgacgaaggtgctgattttcttggcctgtattctttgtcagttggagatggaatgtctgtttgcgcagacgattataagttgtctttgattttcttcagtcagctgtactgtatcaccaaatgtgttcattcaggtaaaagaggaaatcaaagtggcaacatcttattccggtagacatattttcttgagaggtaggagagcctatagaagcagcgtaaattccttttgtgatgtatgatatatgcccattttgccgtagttttttagcatgtaatcctcattttatggatgcttaccaatttttttccataaaattgtggtcgaggttgtattgttgaatctggagatgaggtttcactttcgaacatacatacattataataaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0220H02-y5Yru/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0220H02.1" temp_strand="-" temp_description="C07HBa0220H02.1  AC212638.1 htgs_phase:1 submitted_to_sgn_as:gi|158262133|gb|AC212638.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0220H02, *** SEQUENCING IN PROGRESS ***, 9 unordered pieces">
        <position start="80644" stop="72849"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80344" g_stop="79482" g_length="863"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="863" r_length="863" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79481" i_stop="78846" i_length="636">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.416" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="78845" g_stop="78720" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="864" r_stop="989" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="78719" i_stop="73751" i_length="4969">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73750" g_stop="73615" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="990" r_stop="1125" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="73614" i_stop="73538" i_length="77">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.928" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="73537" g_stop="73141" g_length="397"/>
          <reference_exon_boundary r_type="cDNA" r_start="1126" r_stop="1522" r_length="397" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0220H02.1" gen_strand="-" ref_id="SGN-U324515" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>1522</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0220H02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U324515" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80344" e_stop="79482"/>
          <exon e_start="78845" e_stop="78720"/>
          <exon e_start="73750" e_stop="73615"/>
          <exon e_start="73537" e_stop="73141"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTCTCAGGTTTCTCCTAAAATCTTGCAAGAAGTGTTGTCAGAAAAGGTGTACATCCTTTTCTTCTCTCGTACCAAACAGAGGTCACCATCCACCAAGACATGTTTATCAATTAATGGATCAAAATCCAATCACTCCAATGGCTTGGCTAAATCCAAAATCTTGACCAGTGACTTAGCAAAAACAGTAAACGAAAAGCAAGTTTTAGGCCACCCCTCCGAGAAAGAAAATGTAGTGATGTCTAAGGTCAGTAAAGTGCATTCGAGCCCAGTGCGAGATTTGGGCATATTTGAAAAATCTTCCTTCAAGAGACCTACCTCTGGTAATATCAAAATGGTTTTTCATTCAAAAGAATCTGGCAATAGAACTGGTGATGTGAGAGCATCAGTTCTTACAGAGAAAAAGATTACATCATTATCAAACAAGAATGGTGTTAGCAAAAGTTGTGGTAATGGCCAAGGGACAAGATCACATGCCTTAACAAATGGAAATGGAAATGGAAAACTTCCAATTGTAGCAACCAGCCCTGTAGCAGACGGTCCCCATGAAGATTATGGTGGAAGTAATGGAAAGGCTGCAGGAAAGGATTCATACCACAAAGAGGTGAATAGATCATCATCTTTAGCAAATGGAAATGGTAAAATTCAAAGTGTTGCAACGGATACCTTGAGGGGAAGTCTGCATAGAAATAATGGGGAGAATAGTGAAAGCCTGGCAGCAATATCTTCTGCATACAGGGATACATCCAATGGCCATGTTGAATCGTCTTCTATCTCAGGTTCAAAGAGAAAATCACCAGATCAGTGCATCTTGCTTGAGTATGATGTTCAGTCTCGTGCAAAGGTGGAAGAATTAAAAAAAGAGTATGTTACTCTTTCTTTGATTACCTGCATTCCTTTGCCTTAGTATTATTTAAGTATTATTATAACACAGTGACAGAAGTTTTGAATTCATTATATTTGTCCTTGCATTTGCTAGAACTTGAGACTGTGGTTTGAAAATGCTAGGGGTTTCTTTTACGTATTTTGCTGCAAAGTAGCTTTAGCTGAATTTTGATCTTGCCTTTTACTGGGGTTCTCCTGATAACATAGGATGCAAATGCATTTTGCTTTTATTGTCATTTCTCTTAATTAGGGCCATATATTATATATCCTTAAGAATTAATAAACTGGGACCGCTCATCTCTATGATATTGGTTAACATATCTTATGTTGGCCTTACTAACAATGTACTGAGGAGTTCTGGGAAAGGAGGTTGAATAGGACTTTGACCCTAGCTGTTAAGTTCAGATTCTTACTGTTCTCAAGCTATACAATCGGGAAGCTCCCTTTTGCTGTCATCTCCTCTAGTGGTTAGAGATCATGAAGTGCTTTCTACTTCCAGTGTCCTGCTAAATAAACTTTTTTTATGAAACTGGCAACTAGCTAAATAAACAGTTCACAACTTTATCTTATATCCGCAACGTGATTATTTAACCCTATCTTTCGAATGAGTTTCAGGCTCCATCAGGAAGCTTCATCATTTCTAAGAACATGTGGTTGGTCAGAAGAAGTTTATGCTTTTATGCGTTCCAAAAAGTCGGGGACACAATCAAACTTTCAAGCATCAGATGTTAATGCGATGAAGTAAGTTCCTCTAGCTTTGCAGTTTGAATTAGTTTAATTAAGACTACCTATTTGTCCTTGAGGTCGGAAGTTATTTCTCTCTTCTTTGTTTGCTTTAGTACAAATTTTGATAAATAGATACTTTGGAAAACTAAAATATGTATGGGGTACTATTACCTTGTTTCTTATCATTGTTTATTCCAAAGTTGTGTGGCCTGCTATCTTTTTGTCTTTTTCACTAGATGATGCAGTATTTTACTACCATCATAAAAGTAAACTTAGCATTTCTGTGTACATGTTTAGGTATTGGGGCATAGTTGCATATATTTTCTACTATCTTTGTATTCCTACCAAACTGAAAAGAAAGGCACAGTACATCCAAACTTTCTTCTTCATCTTCGTGTTTAAACTACGTTGCTCAAGTTGGACGTGGACTGTCTTGCAAGGGGAAAAGATTAAGAGGTTGCTTTGATGTGAACATGATAAAGTTAACTGCCAAAGGATATGTTTAAGTTCCAACAATTGCATTTTTTGAGAAATCTCTCAGTGAGACTAGCTCCTGTACTTTTCAAAAAAGAATATTTGGATCTAATGCTGAGGAATATGAATTACCAATTTTCAAAAAGAATAGTTGGAAATGAATACGTCGAGTTAATTCTCTTTGGGTTTGGAATAGTACAAATTTCATTTCTGTCATTGGTTAAGTTTGATATTTACTCTATCAAGGTGTAGTGTTGTCCCTTTTCATTTTGGTGCTATTATCAAGGAAAATTGAACTACTATTCTACTAAAATGTAAGTGGTCCAATATGAGTGGGGGGGGGGGGGGGGACTGGGGAGGGGGCAATTGTTTGGTCACCAATATTGTAGCTAGGTTTTTAAGATTTTAATGTATATGTAGAGTTGATTCTATTTGGGTTTGGAATAGTACTAAGTAATTTACCTAAATAAGCGGGTGTAGCAGAAAGAATAAAATCTCTCTTGTGTTGGAGAGTTTTCCCAATTTCATTTCTGTCATTGGTTAACTTTGATATTTACTTGATGGTGTATTGTTGTCCCTTTTCATTTTGGTGCAATTATCAAGGAAAATTTGAGCTATTATTCTACTAAAATGTAAATGGTCCAAAATGAGCATAAAGTTGATTGTCTGGAAAATTTTAACATCATTAACATTGAAGTAGGTCCCGAAATATCTCTCTATGATAGAATTATGGGGAAATCATGGAGAAGCATGCAGAAAAAGTATTTTGCTAACTGCACAAGAAGTTTTTAATTTGAGAAAGTGGATTTAGTTTAGGGATTCTGAAGGTGTTAAAAGGGGTCGCGTTAGAACTAATCACTTGGATGAGAGTTTTCTCGAATGATGTGATCTGTTGGATCCACAAGACCTAGCAAAAGTAGGACAGACTGGAGGAAAAAGATCTGAATAGGTGAATACCTATCAGTTGAGACCATGTTTTTGCTACAGTAGTATATTTACTTTAGGTCTTATGTCTTCTAGGAGGTTTTTTTTTTTGAAACTGGAGTCTTGTTTTCTAGTTATCTTTTGTTCTTAGCTGAGATTTATATGTCAACAATTATTTATTATTTTTATTGTTTTTACTATTTTTGTTATTGCACAATATGGGGTCAATGGTTGGGCTTAAATAGAGCAGTATGGTCGGTGAGAATTCATAAGGTCCATCCCAACTTGCTCGGGATTGAGGTGTAGTGGTTGTTGGACTTAGCTTAGGGACAATCTATACAAAAAGATGGAAAGATACAATTTCCCTCATCTTTTTTCGTGAAACAGGGAAAAGACACCTCTATTTTCCCTCCTCCATTTTCCTACTTGAGTGTTATTTAATCAGCCAAACAGCGCTTCACCTGCAAATCGGCCCAGTAGTGCTTCATGGTCTACCCAATAGTGCTGCATATCTAAACCACTCTGTCTAAGATTGGTAAACATAACACAGCAGACATCGTTTTTGGCTCTTTTTACTTTGTGGCTAAAAGTTCTCCAGCAATACATAATTTAACTTGGGACGAGAAAGTACTGTTCAATAACAATACGTTGAGTGGATTAACTACAGAGGATTCATATAGTTTCAACTCGAATTAATAGCACTGAGCCATACTTGATTGAGTTTTATTGACAGTGAATGGAAATTTGGTTTTATCAAAAGTGATTGACAAGTGTTTCCTTCCATTTTTAAACAAGGTAAGTGACCTGCAAGCTCTTTTTTCTGTGTTCTTGCTTTAGTGTGTTGTTTGAAGATATTCTGTTTTTGCCTCTTCTATTCCAGATCTAATTGTTGAATTCCCCGACTCCTTTGACTGCATCCACCACTCACCACATGTACTGTTTGTTGTTGCCTTGGCTCATATTCTATTTGTCCTCTCCACAACACAATTCTGTCTTCCCACTTTTGTCCTGTTCCTTTTTTCTTTTTCACAATGTGCAGTATATGAACTGAGAGAGAAGTGTGTCCCTAATTAATTGTGCCCGGTGCTGTTTGCTTGCCATTATGTTATTTCGTGATAATTCTTGTAGCTTGTATTGCAAAATGTTTTTTGATTACAAATGAAAAGGAAAAGTACCATTCGAGCACGTCAAGATCTTTGTTGCTTATTCTTGTGATTGTCCTTCTTGTTGCTGTTGTTTGGAGGTAAGATTGTCACTGCATCTCAATGCATTATTAGTATTTGTAACATGGTGCACTTGACTTGAAATGTATCCTTGGGTGAACACAACAATGTCAACGAGTGTTAAGATTCTTTCATATTCTTTTTTTGATGAAATAAGTAGTGTATTAATAAGCAAAGCATCCAGCAGATGCATAATTACAGAAGTAGGAAGAGTCAGCTCAAATAATGGACAAAAAAAACTTATCTAAGGACTAGTGAGCTTACTAATTCCAAGAAAATATCAGTGCTAAAAGCAGGTGTAAGATTAACCCAACATAAGAGTAGAACTAAGCATCTGGCCTGGAGCTTGGAGTTGACAGTTGATTCCTCTCTGTCTATAAGCACCACAAAATAGAAGCTGGAACCATAGATTTTTGATAAACCAGATCTTTTTGATGGATTTCTCAACTAACCTTTAGTTCCAGTTAACAAAAATGAAAAATCTCTCTAATACTAAAGGGCATAAACCCACTGTAAGCCAAGGAAGGATAAGTACGTAGATGATAGACCAGATGTCTGAAGCAACATGGAGTGATGGAGATGTAAGAATAAATGATTGACAGATTCTTGATTGTAATGCACATGTTACATCTGTTAGCTAGGTGACATCTCCTTCTTTTATGATTAGCTTTAGTCAGAACTCAGAAGGCATTTCGTAAGGCTAACCAACAGAAGTCTTGGAGTTTGGGAGGCATTTTCTCCTGTCATACAAGCTTCCAAGGCCACTGATCAATTAGAGCTTTATTGGAGCTCATGAGTTGATAGTTGGCTTTGACCAAGTATAAGCCATCCAAGTTGTTGCCCCATCTGAACATGTCCTCTGAGGATTGATGGCAATATGCTGTAAAATGCCAAGGAGGCCTGACAGTTCTTTGAACTCCCAGTCATTCATATTTCTTCTCAAGCTTGGATGCCAAGTATTTCCCTCTCAATTCTCGATAAGAGTAGTCACGATTGGAAGCAATGGGGAAAATCGTGGGGCACGCTTAAGCTTCCTTCAGAGTCAATTGATGTAACCATAGATCTTTACAGAAAAGAATATAATTCCCATCATCCACCTGCAAAGATGAATTCTTGAGAAAAGAATGGACGCAACACTTTATTCTCTTCTACCGCTCTTTGTTTACTTCTGGCCTTCCCAAACTCCTACATGGGGGGTGTCAGATCTTGGAGTAAGCTCCCTTCAACACCTAAGTGCTTTTTCTTACACCTATTTAGCTAATGGGGCATTGGTGATTGGTCACAGCCGAAATTCTGTCAAGCTGCAGAAGAACTTCTGAAGGGGTGGGGATTAGGGACATAAATTAAGTAGGGATGCTGCTACCAAAAGAAAGATATTGTTGTTTCCAAAGCTAACCTCTTTTTCCAGTTTCTGAACAATCCCAGATAGGTGGTTGGAAAACAATCTGTATTGCAACACATAGTCTCACCTAGCTCATCCAATTCAGGAACCAAATTAACAGGATAAATGACACTTTAAATATGTGATGTGAAGCCCAGGGAGTGCCTCAAAGATTATCTAAATAATTTTTAAGTGTTAGACCTCTGACCTCTCATGACAACAGAAGATGTGAGAGTGCCATCAGCAGACAACCCATGAGAAACAGAGGCTGAGGTATTAGTCCCATTGCCAATACCAAAACCCTCCAGCCAGTTGAGTTGTTAAGCCTTGTCTATCATCCTGCTAAGACCCTCCATGGCTAGTAAGAAAAGAAAGGGGGATGGGGGTCCCTTGCTTTATTCCTCTCTTGAGAGAGAAATTCCAACTGGACTCCTGTGAACCAACACAGAATATTTAACTGTAGTGAATAATCCATTTGTCTCCAAAGCCCATCTGCCTCAAGATAGATAATAGGTACTTACTGTTTAATTTGTCAAAGGCCTTTTCTGTCCAGTTTAAATAGCAGCCCAGAAACACCACTCTTAAATCTCCAGTCAAGGGTGGGCCTCTGTAGCAATGAGAGCAGCATCTGTGATCTTGTCTGCCTTTAATGAGGTTTCTGGAAACATTAAAAAGTCTTGGTTTAGAAAAGATTAGAAATGAGGATGACATGCAATTCCCTTCCGAGTCATTGTTGTGGTCATGATGAACTTTTGGCTGAGAAACAAGTGCATGTAGGTCAATCAGAAAAGGAAAATAAGGATAAGATGGTGGTGGACTAAAGGTTCACTGATCTATGGCTAGTACTTGTATTGTCAATGAACAATTATCAGAGTCCATTACCGACTATTACATAGATAGTGTGATGATGCTTACACATGCCTTTATACTCTCTTTTCTTTTTATCTTCGAATATTTGTGCTAAATATTGTTCGTCTTGCAGGGAGTTGTTGATTGCAGATGCCAAATCAATGTTTATCTCACAAATTCCTCAATCATTGAAGGGCAGTCTTATTGAACGTTTAACATCATTTAGTCAAGGAACACCACCCTCCAGTACCTAAGCACACTTGGACATGGTATGTGCAGAAGCAGAATGGTCTTTTCAGGTTTTAAGGTGCACAAATCATGTGAATTACCCTTGAAAATTTTGCAGTCCATTGACGAAGGTGCTGATTTTCTTGGCCTGTATTCTTTGTCAGTTGGAGATGGAATGTCTGTTTGCGCAGACGATTATAAGTTGTCTTTGATTTTCTTCAGTCAGCTGTACTGTATCACCAAATGTGTTCATTCAGGTAAAAGAGGAAATCAAAGTGGCAACATCTTATTCCGGTAGACATATTTTCTTGAGAGGTAGGAGAGCCTATAGAAGCAGCGTAAATTCCTTTTGTGATGTATGATATATGCCCATTTTGCCGTAGTTTTTTAGCATGTAATCCTCATTTTATGGATGCTTACCAATTTTTTTCCATAAAATTGTGGTCGAGGTTGTATTGTTGAATCTGGAGATGAGGTTTCACTTTCGAACATACATACATTATAATACCATCCAT</genome_strand>
        <mrna_strand>GATTCTCAGGTTTCTCCTAAAATCTTGCAAGAAGTGTTGTCAGAAAAGGTGTACATCCTTTTCTTCTCTCGTACCAAACAGAGGTCACCATCCACCAAGACATGTTTATCAATTAATGGATCAAAATCCAATCACTCCAATGGCTTGGCTAAATCCAAAATCTTGACCAGTGACTTAGCAAAAACAGTAAACGAAAAGCAAGTTTTAGGCCACCCCTCCGAGAAAGAAAATGTAGTGATGTCTAAGGTCAGTAAAGTGCATTCGAGCCCAGTGCGAGATTTGGGCATATTTGAAAAATCTTCCTTCAAGAGACCTACCTCTGGTAATATCAAAATGGTTTTTCATTCAAAAGAATCTGGCAATAGAACTGGTGATGTGAGAGCATCAGTTCTTACAGAGAAAAAGATTACATCATTATCAAACAAGAATGGTGTTAGCAAAAGTTGTGGTAATGGCCAAGGGACAAGATCACATGCCTTAACAAATGGAAATGGAAATGGAAAACTTCCAATTGTAGCAACCAGCCCTGTAGCAGACGGTCCCCATGAAGATTATGGTGGAAGTAATGGAAAGGCTGCAGGAAAGGATTCATACCACAAAGAGGTGAATAGATCATCATCTTTAGCAAATGGAAATGGTAAAATTCAAAGTGTTGCAACGGATACCTTGAGGGGAAGTCTGCATAGAAATAATGGGGAGAATAGTGAAAGCCTGGCAGCAATATCTTCTGCATACAGGGATACATCCAATGGCCATGTTGAATCGTCTTCTATCTCAGGTTCAAAGAGAAAATCACCAGATCAGTGCATCTTGCTTGAGTATGATGTTCAGTCTCGTGCAAAGGTGGAAGAATTAAAAAAAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCATCAGGAAGCTTCATCATTTCTAAGAACATGTGGTTGGTCAGAAGAAGTTTATGCTTTTATGCGTTCCAAAAAGTCGGGGACACAATCAAACTTTCAAGCATCAGATGTTAATGCGATGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTTGTTGATTGCAGATGCCAAATCAATGTTTATCTCACAAATTCCTCAATCATTGAAGGGCAGTCTTATTGAACGTTTAACATCATTTAGTCAAGGAACACCACCCTCCAGTACCTAAGCACACTTGGACATG.............................................................................TCCATTGACGAAGGTGCTGATTTTCTTGGCCTGTATTCTTTGTCAGTTGGAGATGGAATGTCTGTTTGCGCAGACGATTATAAGTTGTCTTTGATTTTCTTCAGTCAGCTGTACTGTATCACCAAATGTGTTCATTCAGGTAAAAGAGGAAATCAAAGTGGCAACATCTTATTCCGGTAGACATATTTTCTTGAGAGGTAGGAGAGCCTATAGAAGCAGCGTAAATTCCTTTTGTGATGTATGATATATGCCCATTTTGCCGTAGTTTTTTAGCATGTAATCCTCATTTTATGGATGCTTACCAATTTTTTTCCATAAAATTGTGGTCGAGGTTGTATTGTTGAATCTGGAGATGAGGTTTCACTTTCGAACATACATACATTATAATAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-98Fe43/lycopersicum_combined_unigene_seqs" ref_id="SGN-U345772" ref_strand="+" ref_description="SGN-U345772        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | transporter-related, low similarity to SP:Q96A29 GDP-fucose transporter 1 {Homo sapiens}, phosphoenolpyruvate/phosphate translocator precursor (Mesembryanthemum crystallinum) GI:9295275; contains 10 predicted transmembrane domains; | chr3:4815833-4817987 REVERSE | Aliases: MLN21.19(evalue: 8e-46, score=181) genbank/nr: gi|18400381|ref|NP_566487.1| transporter-related [Arabidopsis thaliana] gi|15294190|gb|AAK95272.1| AT3g14410/MLN21_19 [Arabidopsis thaliana] gi|20147279|gb|AAM10353.1| AT3g14410/MLN21_19 [Arabidopsis thaliana](evalue: 6e-44, score=181)">
      <seq>agtttgtgagggattcataaatggcggatccgcagagaaaatgggtgaccgacgatgtattaacatacgcatatcttctcctctacattgcactctctagtggtcagatcttcttcaacaagtgggttttgtcttcaaaagaagtaaactttccttatccccttggattgactctgcttcacatggtcttctcctcaattctatgttttatgcttaccaaggttctcaagataatgaaagttgaggaagggatgactctagatatatacattagttcggtcataccaattggtgcaatgtttgcaatgacactttggcttgggaacactgcctacctttatatttctgtttcatttgctcaaatgttgaaagcaatcagtaagtagtactgttattagctggcttatgtactgtagactatagaaggtaaaggtaaatacagctttaggatatgataggggagctgtcatgcgacacttcatgcttgatagatggctttagaggctcggccgatgaccatttgctcaagtacttttttaatttgtgccaagggcatcatctctctctcttttggtttcttctgcagtgccagtagcagttttcattctgggggttgcagccggacttgaaatgatgagctgcagaatgcttctcataatgtcagtaatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0220H02-y5Yru/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0220H02.1" temp_strand="-" temp_description="C07HBa0220H02.1  AC212638.1 htgs_phase:1 submitted_to_sgn_as:gi|158262133|gb|AC212638.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0220H02, *** SEQUENCING IN PROGRESS ***, 9 unordered pieces">
        <position start="90502" stop="87156"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90202" g_stop="90081" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90080" i_stop="88787" i_length="1294">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.844" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88786" g_stop="88679" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="230" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88678" i_stop="88601" i_length="78">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.918" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="88600" g_stop="88566" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="265" r_length="35" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="88565" i_stop="87860" i_length="706">
            <donor d_prob="0.864" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="87859" g_stop="87456" g_length="404"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="669" r_length="404" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0220H02.1" gen_strand="-" ref_id="SGN-U345772" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>669</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0220H02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U345772" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90202" e_stop="90081"/>
          <exon e_start="88786" e_stop="88679"/>
          <exon e_start="88600" e_stop="88566"/>
          <exon e_start="87859" e_stop="87456"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTTGTGAGGGATTCATAAATGGCGGATCCGCAGAGAAAATGGGTGACCGACGATGTATTAACATACGCATATCTTCTCCTCTACATTGCACTCTCTAGTGGTCAGATCTTCTTCAACAAGGTAATCCCTTCTAATTAACCACGTAAATTTGCTTATAAATTAATTCGGATTCGTTGTCTATCCTGTGACTGTAATTGATACTGGAGTAATGCTTTGTGCCTTGGATATAATGGCAACTTTCGCCACTGCTTTCAATTTATAGTTGAATAGTTTCGTAATATATGTGTTTGTTGTTTGTGCTCATTTTGCATCCATAATAACAAGACAGTATTGATGGAGGAGTAGATAAATAAATTGTACATAGAGTTTCTTAAGGAAAATGCACGGGTTGAACCAACACTGTCCCGGTGCAGCGTCCGTTTACTTAAAATCATGGATCTGTCTTTGACAGTTGGAAGAAATGTCTCTTTCTATGAGTGATATACACGGAGCATACATTGTTGCAAAGTTGTGAAATTATGCCTTAAGGGTAGTGTCAGCGCTCATAAGGCCAATTGCACTTCAACCTGTCCGTAATTCTATCATTTATGTATTTTTCTGAGTTGTTATATAAGATAGGCTGAAAAATCAGGTAATCAAGTTAATGAACTGGTTTTTAGACATTTGAAGTCACAAAGGTGGAGTTCAATGATATAGAACTTCATATTACTTCATGGGAAGCAGTAGTATCTCATAAGTCTCATCAATTTGTTTGTTCCAAGTGTATTGTTTGTGCAAACATTTGATAAGCCTCATCAAATCATTGTTTGTTTGTTCCAAGTTTGTTTTTTGTGAAAACATTTTATAAATCTCATCAATTCATTAATTTGTTTGTTCTAAGTGTATTGATTGTGAAAACATTTTATCCCTTTAACCAGAAACTTAAGGTTGCATTATGTTTTTAATCAGTCAAATGTCTCTTGTACCAGTTTAAAGAAGTTACAGAAGTGTAAACACTAAAAAGATTCTTTTCTTCTAGTATTTCTTTTTGTGCTGTTGACTGTCTATATTTTGTTCATTTTACAACTTAGTTGAGAATTCATTTTAGAGATTGTTAAGTAAACATATAGAAGTGACATTCAATATACATAAGGAGTGATCTATTAGAATAAAAACTTACAGAATTTTGAGAACCTGCAACATCTTAGTCAAATAACTACCTATAAAATAATCTTTTGTTACTGTGTGAGAGAGAGAGGTTGGGATTTTCTTTTGAACTGATTTTATTTGATCATGGATTTCTGCTTCTTTGCTTATCTAGCTCTATTTTAAGTCAACTCTAGTTAACAATTGCAGCATTTTAAGACTAGTTCGCATCTCTGACGTGTTGTAGCTCCTTCAGACTTTATCTGACTTATAGTGACGTGTGTTGCAGTGGGTTTTGTCTTCAAAAGAAGTAAACTTTCCTTATCCCCTTGGATTGACTCTGCTTCACATGGTCTTCTCCTCAATTCTATGTTTTATGCTTACCAAGGTTCTCAAGGTAAATAATATTCCCTTTTTGTTTTTATTGGTTACATGAATGCCACCTTATAGTGCTAATTTAGGGGATTTCATGCAGATAATGAAAGTTGAGGAAGGGATGACTCTAGATATGTGAGTATTCAAGTGAAAAGAGTTTCATGTCAAATATTTATCTTATTATGGATATTGATTGGCTTCTACCAGAGGAATTATTTTCTTTCCTGACATTGTACTTAAGCTCATTTACTTGTTCCCAAGTTATATGTCTAGCTTTCTTTTTTCTTTTTTTTTTGATGTGACAGCGGGTTTCACTTTTGTATGAAATAATTATACCAAGTATTTTATCTCAAAAGAAATTACACAAGAATCCGCCTTTTTGAACCTAAAAAAAACTATTCCTTTTCATCAACTCTTAACAAAAATGTAAGTCAATTTGTAGCCTCCACGTGTTCTTATTAGAGTTGTTACATATTTAAGTTCTGACCTTAGAAATGTGCCAACTCAATTGTGACTAAAATGGAGTAATCAAATTAGGCTAAAAAAGGAGTTCAGCATGCTGGTTTTTACCAAATAATGAGAGAATCAAAAGTTAATGGTGAACTTCCTTATTTACCTATTTGTGTGAACTTGATCAAGATGTTGAAGAATCTTTCAGTGTGGGCTTCTCGTTATCTTTTATACGTGCATTCTAATTCATCCATGTAAGACAACTATTTGCTCTTGTTGTCATTTTTCTTCTTCTTGTTGTTCTTTTTTTGTGGTCCTCTTTTGTCAGATTTTCTCTTTCAATTGTTTCTGAAATTTCATTTATTCAAAATATTGTGGTTTCAAAATGCAGATACATTAGTTCGGTCATACCAATTGGTGCAATGTTTGCAATGACACTTTGGCTTGGGAACACTGCCTACCTTTATATTTCTGTTTCATTTGCTCAAATGTTGAAAGCAATCAGTAAGTAGTACTGTTATTAGCTGGCTTATGTACTGTAGACTATAGAAGGTAAAGGTAAATACAGCTTTAGGATATGATAGGGGAGCTGTCATGCGACACTTCATGCTTGATAGATGGCTTTAGAGGCTCGGCCGATGACCATTTGCTCAAGTACTTTTTTAATTTGTGCCAAGGGCATCATCTCTCTCTCTTTTGGTTTCTTCTGCAGTGCCAGTAGCAGTTTTCATTCTGGGGGTTGCAGCCGGACTTGAAATGATGAGCTGCAGAATGCTTCTCATAATGTCAGTAATC</genome_strand>
        <mrna_strand>AGTTTGTGAGGGATTCATAAATGGCGGATCCGCAGAGAAAATGGGTGACCGACGATGTATTAACATACGCATATCTTCTCCTCTACATTGCACTCTCTAGTGGTCAGATCTTCTTCAACAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTTTTGTCTTCAAAAGAAGTAAACTTTCCTTATCCCCTTGGATTGACTCTGCTTCACATGGTCTTCTCCTCAATTCTATGTTTTATGCTTACCAAGGTTCTCAAG..............................................................................ATAATGAAAGTTGAGGAAGGGATGACTCTAGATAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACATTAGTTCGGTCATACCAATTGGTGCAATGTTTGCAATGACACTTTGGCTTGGGAACACTGCCTACCTTTATATTTCTGTTTCATTTGCTCAAATGTTGAAAGCAATCAGTAAGTAGTACTGTTATTAGCTGGCTTATGTACTGTAGACTATAGAAGGTAAAGGTAAATACAGCTTTAGGATATGATAGGGGAGCTGTCATGCGACACTTCATGCTTGATAGATGGCTTTAGAGGCTCGGCCGATGACCATTTGCTCAAGTACTTTTTTAATTTGTGCCAAGGGCATCATCTCTCTCTCTTTTGGTTTCTTCTGCAGTGCCAGTAGCAGTTTTCATTCTGGGGGTTGCAGCCGGACTTGAAATGATGAGCTGCAGAATGCTTCTCATAATGTCAGTAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-98Fe43/lycopersicum_combined_unigene_seqs" ref_id="SGN-U318127" ref_strand="+" ref_description="SGN-U318127        Tomato 200607 #1 [16 ESTs aligned] arabidopsis/peptide: | Symbol: None | bystin family, contains Pfam profile: PF05291 Bystin | chr1:11331157-11333519 REVERSE | Aliases: F27M3.14, F27M3_14(evalue: 1e-139, score=493) genbank/nr: gi|15222394|ref|NP_174447.1| bystin -related [Arabidopsis thaliana] gi|12597848|gb|AAG60158.1| bystin, putative [Arabidopsis thaliana](evalue: 1e-137, score=493)">
      <seq>tcgtgccgaattcggcacgagcagaggtttaagcaaaagcaaaaatggggaagaaacgagaacgcctcacaaatccagaacccttccttgacgatgattcaaaatccaaagcttcctcgaagaaacgctccaaagctcctaaatctcaccagcagcaacaacaggttatatcgtctagtattagttcgaagatattgaaggaggcgttacttcagcagaaggaagtagatgaggaggagacacgagagagaaatcctaatgctatagtgttttcggaggatgttgcaactagagctgttgaggaggatgacgatgacattgataattttagtgggtttcaggagactcaaagtcaatttggtgatttggaggatgaggttgacaagttgctattggaggatgagaagctattggaggctttttattctacacaaaatcgccctgaacgcacattgggccaaatccttattgaaaagagcaaggaacagaacgcacaagtttcttcagtgcaaccaatgcctaaattggatgaatcgatcattgaattatacaaaggtgttggcaagcatcttagcaaatacaattcaggcaagatgccaaaagcgttcaaacatattccttcattgcaatattgggaagatgttctatatttaacagaacctgagaaatggtcaccaaatgcaatgtaccaagccacaagaatatttgcttcaaatttgggtgtcaagaaggcagaacgcttctacaagttggtcttactcccacgagttagagatgatattcgcaagaataagagattgcattttgctctgtatcagtccttgaagaaatctctttataagcctgctgcctttaataagggaatcttgtttcctttgtgtgagtcaaggacatgcaccttgagggaggctgtgatctttgggagtgttattgagaaggtctccattccgcatcttcatgctagtgtagcgctgctgaaacttgcagagatggagtattgtggcacaacaagttatttcatcaagttactgattgagaagaaatatgctttgccctatcgtgtacttgatgccatggtagcacacttcatgaatttctttgatgaaacaagagtcatgcctgtgatctggcacctgtcacttcttgtatttgtgcagaggtacaaaactgagatgaggaaggaggataaagctaacataagggcacttgttgaaagacaaagacatagattgattacaccagatatattgagggaaatcgaaaagagcagaagtcgtggggaaaaggaggatgatccaatgttaattgcaagtcctctttctgtgatcaataaagcaattgaagaagataggtttgatatccccgatgttcctatggaggaggactagattttctcagcaacctctatacgtgatgcagtatgtgatggggatggtatactagcagattcaggtttcaatatgtaatagagatcgagctgtgtgataagatagatgagcatacatgtgtgggctgttggagttgagctagagattttgcaatatattcttaaatgatatttatattttttgattcctgtcttcatcggcatatgcctaagcaggtttatgcagcgacgaaccagaaagttgtaaccgccatgtttttttgaagtttagtgtatcaatgatactcccctgagaatacatgggttaaatttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0220H02-y5Yru/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0220H02.1" temp_strand="+" temp_description="C07HBa0220H02.1  AC212638.1 htgs_phase:1 submitted_to_sgn_as:gi|158262133|gb|AC212638.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0220H02, *** SEQUENCING IN PROGRESS ***, 9 unordered pieces">
        <position start="98654" stop="104452"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98958" g_stop="99099" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="23" r_stop="164" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="99100" i_stop="99194" i_length="95">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="99195" g_stop="99401" g_length="207"/>
          <reference_exon_boundary r_type="cDNA" r_start="165" r_stop="371" r_length="207" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="99402" i_stop="99852" i_length="451">
            <donor d_prob="0.788" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="99853" g_stop="99988" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="507" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="99989" i_stop="100180" i_length="192">
            <donor d_prob="0.777" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="100181" g_stop="100229" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="508" r_stop="556" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="100230" i_stop="100309" i_length="80">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="100310" g_stop="100637" g_length="328"/>
          <reference_exon_boundary r_type="cDNA" r_start="557" r_stop="884" r_length="328" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="100638" i_stop="101433" i_length="796">
            <donor d_prob="0.666" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="101434" g_stop="101513" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="885" r_stop="964" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="101514" i_stop="101773" i_length="260">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="101774" g_stop="101821" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="965" r_stop="1012" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="101822" i_stop="102234" i_length="413">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="102235" g_stop="102381" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="1013" r_stop="1159" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="102382" i_stop="102984" i_length="603">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="102985" g_stop="103057" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="1160" r_stop="1232" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="103058" i_stop="103148" i_length="91">
            <donor d_prob="0.946" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="103149" g_stop="103224" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1233" r_stop="1308" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="103225" i_stop="103660" i_length="436">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="103661" g_stop="103765" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1309" r_stop="1413" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="103766" i_stop="103864" i_length="99">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="103865" g_stop="104152" g_length="288"/>
          <reference_exon_boundary r_type="cDNA" r_start="1414" r_stop="1701" r_length="288" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0220H02.1" gen_strand="+" ref_id="SGN-U318127" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1679</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0220H02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U318127" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98958" e_stop="99099"/>
          <exon e_start="99195" e_stop="99401"/>
          <exon e_start="99853" e_stop="99988"/>
          <exon e_start="100181" e_stop="100229"/>
          <exon e_start="100310" e_stop="100637"/>
          <exon e_start="101434" e_stop="101513"/>
          <exon e_start="101774" e_stop="101821"/>
          <exon e_start="102235" e_stop="102381"/>
          <exon e_start="102985" e_stop="103057"/>
          <exon e_start="103149" e_stop="103224"/>
          <exon e_start="103661" e_stop="103765"/>
          <exon e_start="103865" e_stop="104152"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGGTTTAAGCAAAAGCAAAAATGGGGAAGAAACGAGAACGCCTCACAAATCCAGAACCCTTCCTTGACGATGATTCAAAATCCAAAGCTTCCTCGAAGAAACGCTCCAAAGCTCCTAAATCTCACCAGCAGCAACAACAGGCAAATCGCACTATACGATTTCGGCTGAAATAAGTAGTTAAGAAATTGATTGAATAAACTTAAGAACTAATTGTGGATTTGTTTGTTGTTGACAGGTTATATCGTCTAGTATTAGTTCGAAGATATTGAAGGAGGCGTTACTTCAGCAGAAGGAAGTAGATGAGGAGGAGACACGAGAGAGAAATCCTAATGCTATAGTGTTTTCGGAGGATGTTGCAACTAGAGCTGTTGAGGAGGATGACGATGACATTGATAATTTTAGTGGGTTTCAGGAGACTCAAAGTCAATTTGGTGATTTGGAGGTAACTACTTTGTGAAATTAGCTTAGTGGCTGCTAGGAAGGTTGATTGATGTAGTAACTATTCAATTGCTTAAACTTTTTATTGTGTTTCATTGACATGGAACTGTTTAGTCTGTATGAGCTTCACAAACTTCCTATAACTGGAACATAGAGGATTCCTTATTGAGCAGATCTGCAGATGGATATAGATGATTTATAAAGCCTATCTCGACTAATTTTGGTTTGAGGTCTAGTTATTTGCTTAGTTGATTTTCATTGACACCGGTTATGACTGGACCTTTTCTAGCTACAACAAGAGCATCATTTTATCTGTTTAATACAATAAAAATTGGATCTTAACTGATATCTACCAAGACAAGAAAAATCCAATTTTCAAGAATAGAAACGGGTCATTTCTTATGGTATCAGTTCACAACAGTTAATGACTTCTTTTTTTCTGCGCCTCAACACAGGATGAGGTTGACAAGTTGCTATTGGAGGATGAGAAGCTATTGGAGGCTTTTTATTCTACACAAAATCGCCCTGAACGCACATTGGGCCAAATCCTTATTGAAAAGAGCAAGGAACAGAACGCACAAGTTTCTTCAGGTTTTATTCCGTCATTTCAGAATAGAAAACAACTATCACCAACATTTGACTTGCGATTGTTCTTGAGCAACCGAAGCTTTAATTACATTTATTATCAAACTTCTTTTAAGCAATTTGACAATGTCCTTTATCCAAAATAATAATCATAAAAGCTATTTAACTATGAGAACTGATTATGTTTGTTTGTTGCAGTGCAACCAATGCCTAAATTGGATGAATCGATCATTGAATTATACAAAGGGTATGTTTCTCCTGGTCCTTATTTTATCAGTTCTTTATCTGCAAGCTTAGCTTGCCTGACTGGCGGTGGTTGTTTTGCAGTGTTGGCAAGCATCTTAGCAAATACAATTCAGGCAAGATGCCAAAAGCGTTCAAACATATTCCTTCATTGCAATATTGGGAAGATGTTCTATATTTAACAGAACCTGAGAAATGGTCACCAAATGCAATGTACCAAGCCACAAGAATATTTGCTTCAAATTTGGGTGTCAAGAAGGCAGAACGCTTCTACAAGTTGGTCTTACTCCCACGAGTTAGAGATGATATTCGCAAGAATAAGAGATTGCATTTTGCTCTGTATCAGTCCTTGAAGAAATCTCTTTATAAGCCTGCTGCCTTTAATAAGGGAATCTTGTTTCCTTTGTGTGAGGTATAAAACTAATGTGAGAAAAATCTTTAAATTGATTGGAGGATTGCATTTATGTCCAAAGTTTACAACTTCTTTTGTAGAAACTAACAATGATTAGATTAGCTATATTGTCTTGATTGCCTACTGATTGTTTACATGACTTGCTTTACAGCAAAATATAGGTCGTGACTCAGGGATATTGAAAAGTGGGTTAAGGGTTTTCCGTTTATCTGCTTCTCTATTTTATGGGTATTTTGTTACAGCTGTGCAAAAAACTTGGTGAAGTCTGGTGTTACATGCATGCTGAGAATTTTGTTGTTAAGCAGGAGTTACTCGAGAACCTGACATTCTTCTTGTATATTTTAGTTAACCAAAAGCTACCAAAAGTTAGTAAGTGGATAGATGAGTCAAAAGTTACCTATGTGGTTAATGTTTCAAAGCCTTGCTTGCAATGAGATATTACAATTGTGTGCTGCCTCTTTTTTTCTTCCTCCTTTTTGGGTGTCTGGGTTTCATACAATTTATGTACTATCTGACTCTTTTTCTTTTGTTGTTGGGAACTTTCATTATGCATAAATTCTCAATGAGAAAAAAGAAAAAGAAAAGAAAGTTTTGTTATGTGCCTGTCTAATCTCTTAGTAACACACGGCCATCCTGTAGTGAGATATGACTTGAGTGTCTGTTGAGATCAGTTTTCTCTGATTCTCTTATGTACTTTCACATTGTCAGGATTTAATATAATTCTACCTCTGTATCATCTCTTTGTATATGTGTATGATGTGTATCCTGCTTTCTGAAATGTCTATTTCTGATCCAGTCAAGGACATGCACCTTGAGGGAGGCTGTGATCTTTGGGAGTGTTATTGAGAAGGTCTCCATTCCGCATCTTCATGCTAGGTATGGTTGCTTGAAATATTTATCGATACACTAAGAGTAGTCAGTAGCTGAATAACTAAACTTTGTATTTTTACTGGAAATTTTAGCTTAGGACAAGATTAGAAACAGAAAGAGTAGTACTCTATTTCTATATCTTATTCTTGTTGCAACTTCCTCTCATCTTTTGCTAATAAAGACAGTTATTATCAAGGTATTGCTGCTGTCTCTGTAATATCTCATTCTTTTAGAAGCCTTTAACTTTTAATCGTTTTGGTATGCAGTGTAGCGCTGCTGAAACTTGCAGAGATGGAGTATTGTGGCACAACAAGGTATTCTACATGTTGTGCTATCTTTTGAACTTTTTCCTTTTAGTTTACCCATGATTCAAGTGCCAGTAGAAAGCTGTACACTAGGATATTTATCCTGGTTAATGTAAAAGTAGCATTAGTTTACGTCAGTCTGCATTCTTTTGAACTGTATACTAGGATATTTATCCTGGTTAATGTAAAGTAGCATTAGTTTACATCAGTCTGCTTTCTTGGAGGGAAAAGTTCTGGATTTAGTTTTTAGGGATGGACCTACATGAAATAATTGCTTTTATTGATATCAATGGGAGCTAAACTATACAGCTGGAACTTTTAAGCATCAGGATATGTTCAATCATGCAAGTCATGCTGTGTTATGCAGAAATTATTTTAGGCTACAACTAGTCTGATCATTTTATTCTTTCTTTTTGCTGCAGTTATTTCATCAAGTTACTGATTGAGAAGAAATATGCTTTGCCCTATCGTGTACTTGATGCCATGGTAGCACACTTCATGAATTTCTTTGATGAAACAAGAGTCATGCCTGTGATCTGGCACCTGTCACTTCTTGTATTTGTGCAGAGGTTAGTTTCACCCTTCCAATCTTGTGGTGTTTCTTCCTCTCTATGTCAAATGGTAGTTGAGTTCGAAGGTTATTTTCTTATTTTGAATGATAAAAGCTTCAAGGTTACTTCTTATACTTAACCCAATTGATAAGCTACATATTAGACTCATTTACACGTCTCGCCTTCTACTGATCATCTTTTCTCTCAAGTAACCATACACACTTTAAATTCTTTTTAGTGTCCTTGTGGAGTAAAATTCTTATTTTGAATATATAATTACAAATTTATTGACAAAATGGGAATGTAAAATGATGATTAACATCAATTTCTTTTATACTAAGGAACATGATGTAACAATTCTTGTTAATTCCTAATGTCTACTTTACTATGCTGTATGACTGACACTGCCTTTCTAAGTATACTTTTAGGTAGACAAGTGTTGTCACTTATTTAGGCGATGTTATGTTCTTTTCTTTTAATAGCAATTCAATGGTAACCTTGATATTGCTTTTGAATCATCGAGTCTTTCTTTTTTACATTCTTGTCAATTTGTTCAATAACATGATAGATTTTGCAGAGTTCTGAATGTTGTTTATACTATGTGGGAAAATATCGTTATAGGTACAAAACTGAGATGAGGAAGGAGGATAAAGCTAACATAAGGGCACTTGTTGAAAGACAAAGACATAGATTGGTATGCTTTTGTATTTTATTTTTTCGTTGCTGCTGTTCTGTTTTCTGTTGATGCAAGCAAATTCAAGTTATGTTTGTGCTTCCAAATGCAGATTACACCAGATATATTGAGGGAAATCGAAAAGAGCAGAAGTCGTGGGGAAAAGGAGGATGATCCAATGTTAATTGATATCCTCTCATTGATGGTTTAAATCTTTCTGTTACATATCTGCTTGAGCTTAATTTGGTCTGTTTATACTGTGTCGCCTGCTCTTGCCATAACATAGTCGGGTTCTTAATGTTTTAAAAACTGTTGATGAAATAAAAAATCTTTAAACCTTTCGTGCCAGTTCATGCTTAAATTCTGCTATTTCCTGTGAGTGCGTGCATATCTGCATCGATGGAATAGGTTGTCATGCACAACAACAATCTTCTGTTTGTAAGTTTTGTGTATTGTTGAAGTTTGTTGCTTTTTGCAAGATGGATAATTTTTAAATTGTTTATTTCCTGTTGTTCTGTAACGACTGAAGTAAAATAGTAGATGTAGCTATGATTTATTCATGTTGCTATTAATATTTTTTCTGCTGCATCATTGGAAAATATATTTTCTTTAACTCTGTATTACCAAGTCCTCTTTCTGTGATCAATAAAGCAATTGAAGAAGATAGGTTTGATATCCCCGATGTTCCTATGGAGGAGGACTAGATTTTCTCAGCAACCTCTATACGTGGTAAGATACTCGCTCATGTGAATGAAATTTCTTGGTGTATCTATATACGCGTGAAGCTCCAAGCCAATACTGCAGACTAAGTTCCTTTTTTCCCTTCAGATGCAGTATGTGATGGGGATGGTATACTAGCAGATTCAGGTTTCAATATGTAATAGAGATCGAGCTGTGTGATAAGATAGATGAGCATACATGTGTGGGCTGTTGGAGTTGAGCTAGAGATTTTGCAATATATTCTTAAATGATATTTATATTTTTTGATTCCTGTCTTCATCGGCATATGCCTAAGCAGGTTTATGCAGCGACGAACCAGAAAGTTGTAACCGCCATGTTTTTTTGAAGTTTAGTGTATCAATGATACTCCCCTGAGAATACATGGGTTAAATTTTA</genome_strand>
        <mrna_strand>AGAGGTTTAAGCAAAAGCAAAAATGGGGAAGAAACGAGAACGCCTCACAAATCCAGAACCCTTCCTTGACGATGATTCAAAATCCAAAGCTTCCTCGAAGAAACGCTCCAAAGCTCCTAAATCTCACCAGCAGCAACAACAG...............................................................................................GTTATATCGTCTAGTATTAGTTCGAAGATATTGAAGGAGGCGTTACTTCAGCAGAAGGAAGTAGATGAGGAGGAGACACGAGAGAGAAATCCTAATGCTATAGTGTTTTCGGAGGATGTTGCAACTAGAGCTGTTGAGGAGGATGACGATGACATTGATAATTTTAGTGGGTTTCAGGAGACTCAAAGTCAATTTGGTGATTTGGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAGGTTGACAAGTTGCTATTGGAGGATGAGAAGCTATTGGAGGCTTTTTATTCTACACAAAATCGCCCTGAACGCACATTGGGCCAAATCCTTATTGAAAAGAGCAAGGAACAGAACGCACAAGTTTCTTCAG................................................................................................................................................................................................TGCAACCAATGCCTAAATTGGATGAATCGATCATTGAATTATACAAAGG................................................................................TGTTGGCAAGCATCTTAGCAAATACAATTCAGGCAAGATGCCAAAAGCGTTCAAACATATTCCTTCATTGCAATATTGGGAAGATGTTCTATATTTAACAGAACCTGAGAAATGGTCACCAAATGCAATGTACCAAGCCACAAGAATATTTGCTTCAAATTTGGGTGTCAAGAAGGCAGAACGCTTCTACAAGTTGGTCTTACTCCCACGAGTTAGAGATGATATTCGCAAGAATAAGAGATTGCATTTTGCTCTGTATCAGTCCTTGAAGAAATCTCTTTATAAGCCTGCTGCCTTTAATAAGGGAATCTTGTTTCCTTTGTGTGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGGACATGCACCTTGAGGGAGGCTGTGATCTTTGGGAGTGTTATTGAGAAGGTCTCCATTCCGCATCTTCATGCTAG....................................................................................................................................................................................................................................................................TGTAGCGCTGCTGAAACTTGCAGAGATGGAGTATTGTGGCACAACAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................TTATTTCATCAAGTTACTGATTGAGAAGAAATATGCTTTGCCCTATCGTGTACTTGATGCCATGGTAGCACACTTCATGAATTTCTTTGATGAAACAAGAGTCATGCCTGTGATCTGGCACCTGTCACTTCTTGTATTTGTGCAGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAAAACTGAGATGAGGAAGGAGGATAAAGCTAACATAAGGGCACTTGTTGAAAGACAAAGACATAGATTG...........................................................................................ATTACACCAGATATATTGAGGGAAATCGAAAAGAGCAGAAGTCGTGGGGAAAAGGAGGATGATCCAATGTTAATTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTCCTCTTTCTGTGATCAATAAAGCAATTGAAGAAGATAGGTTTGATATCCCCGATGTTCCTATGGAGGAGGACTAGATTTTCTCAGCAACCTCTATACGTG...................................................................................................ATGCAGTATGTGATGGGGATGGTATACTAGCAGATTCAGGTTTCAATATGTAATAGAGATCGAGCTGTGTGATAAGATAGATGAGCATACATGTGTGGGCTGTTGGAGTTGAGCTAGAGATTTTGCAATATATTCTTAAATGATATTTATATTTTTTGATTCCTGTCTTCATCGGCATATGCCTAAGCAGGTTTATGCAGCGACGAACCAGAAAGTTGTAACCGCCATGTTTTTTTGAAGTTTAGTGTATCAATGATACTCCCCTGAGAATACATGGGTTAAATTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-98Fe43/lycopersicum_combined_unigene_seqs" ref_id="SGN-U336396" ref_strand="-" ref_description="SGN-U336396        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | bystin family, contains Pfam profile: PF05291 Bystin | chr1:11331157-11333519 REVERSE | Aliases: F27M3.14, F27M3_14(evalue: 3e-32, score=135) genbank/nr: gi|15222394|ref|NP_174447.1| bystin -related [Arabidopsis thaliana] gi|12597848|gb|AAG60158.1| bystin, putative [Arabidopsis thaliana](evalue: 3e-30, score=135)">
      <seq>agaaatatgctttgccctatcgtgtacttgatgccatggtagcacacttcaatgaatttcttttgatgaaacaagagtcatgcctgtgatctggcacctgtcacttcttgtatttgtgcagaggtacaaaactgagatgaggaaggaggataaagctaacataagggcacttgttgaaagacaaagacatagattgattacaccagatatattgagggaaatcgaaaagagcagaagtcgtggggaaaaggaggatgatccaatgttaattgcaagtcctctttctgtgatcaataaagcaattgaagaagataggtttgatatccccgatgttcctatggaggaggactagattttctcagcaacctctatacgtgatgcagtatgtgatggggatggtatactagcagattcaggtttcaatatgtaatagagatcgagctgtgtgataagatagatgagcatacatgtgtgggctgttggagttgagctagagattttgcaatatattcttaaatgatatttatattttttgattcctgtcttcatcggcatatgcctaagcaggtttatgcagcgacgaaccagaaagttgtaaccgccatgtttttttgaagtttagtgtatcaatgatactcccctgagaatacatgggttaaattttactaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0220H02-y5Yru/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0220H02.1" temp_strand="+" temp_description="C07HBa0220H02.1  AC212638.1 htgs_phase:1 submitted_to_sgn_as:gi|158262133|gb|AC212638.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0220H02, *** SEQUENCING IN PROGRESS ***, 9 unordered pieces">
        <position start="101961" stop="104455"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102261" g_stop="102381" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102382" i_stop="102984" i_length="603">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102985" g_stop="103057" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="196" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="103058" i_stop="103148" i_length="91">
            <donor d_prob="0.946" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103149" g_stop="103224" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="197" r_stop="272" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="103225" i_stop="103660" i_length="436">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103661" g_stop="103765" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="377" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="103766" i_stop="103864" i_length="99">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="103865" g_stop="104154" g_length="290"/>
          <reference_exon_boundary r_type="cDNA" r_start="378" r_stop="667" r_length="290" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0220H02.1" gen_strand="+" ref_id="SGN-U336396" ref_strand="-">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>665</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0220H02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U336396" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="102261" e_stop="102381"/>
          <exon e_start="102985" e_stop="103057"/>
          <exon e_start="103149" e_stop="103224"/>
          <exon e_start="103661" e_stop="103765"/>
          <exon e_start="103865" e_stop="104154"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATATGCTTTGCCCTATCGTGTACTTGATGCCATGGTAGCACACTTC-ATGAATTTC-TTTGATGAAACAAGAGTCATGCCTGTGATCTGGCACCTGTCACTTCTTGTATTTGTGCAGAGGTTAGTTTCACCCTTCCAATCTTGTGGTGTTTCTTCCTCTCTATGTCAAATGGTAGTTGAGTTCGAAGGTTATTTTCTTATTTTGAATGATAAAAGCTTCAAGGTTACTTCTTATACTTAACCCAATTGATAAGCTACATATTAGACTCATTTACACGTCTCGCCTTCTACTGATCATCTTTTCTCTCAAGTAACCATACACACTTTAAATTCTTTTTAGTGTCCTTGTGGAGTAAAATTCTTATTTTGAATATATAATTACAAATTTATTGACAAAATGGGAATGTAAAATGATGATTAACATCAATTTCTTTTATACTAAGGAACATGATGTAACAATTCTTGTTAATTCCTAATGTCTACTTTACTATGCTGTATGACTGACACTGCCTTTCTAAGTATACTTTTAGGTAGACAAGTGTTGTCACTTATTTAGGCGATGTTATGTTCTTTTCTTTTAATAGCAATTCAATGGTAACCTTGATATTGCTTTTGAATCATCGAGTCTTTCTTTTTTACATTCTTGTCAATTTGTTCAATAACATGATAGATTTTGCAGAGTTCTGAATGTTGTTTATACTATGTGGGAAAATATCGTTATAGGTACAAAACTGAGATGAGGAAGGAGGATAAAGCTAACATAAGGGCACTTGTTGAAAGACAAAGACATAGATTGGTATGCTTTTGTATTTTATTTTTTCGTTGCTGCTGTTCTGTTTTCTGTTGATGCAAGCAAATTCAAGTTATGTTTGTGCTTCCAAATGCAGATTACACCAGATATATTGAGGGAAATCGAAAAGAGCAGAAGTCGTGGGGAAAAGGAGGATGATCCAATGTTAATTGATATCCTCTCATTGATGGTTTAAATCTTTCTGTTACATATCTGCTTGAGCTTAATTTGGTCTGTTTATACTGTGTCGCCTGCTCTTGCCATAACATAGTCGGGTTCTTAATGTTTTAAAAACTGTTGATGAAATAAAAAATCTTTAAACCTTTCGTGCCAGTTCATGCTTAAATTCTGCTATTTCCTGTGAGTGCGTGCATATCTGCATCGATGGAATAGGTTGTCATGCACAACAACAATCTTCTGTTTGTAAGTTTTGTGTATTGTTGAAGTTTGTTGCTTTTTGCAAGATGGATAATTTTTAAATTGTTTATTTCCTGTTGTTCTGTAACGACTGAAGTAAAATAGTAGATGTAGCTATGATTTATTCATGTTGCTATTAATATTTTTTCTGCTGCATCATTGGAAAATATATTTTCTTTAACTCTGTATTACCAAGTCCTCTTTCTGTGATCAATAAAGCAATTGAAGAAGATAGGTTTGATATCCCCGATGTTCCTATGGAGGAGGACTAGATTTTCTCAGCAACCTCTATACGTGGTAAGATACTCGCTCATGTGAATGAAATTTCTTGGTGTATCTATATACGCGTGAAGCTCCAAGCCAATACTGCAGACTAAGTTCCTTTTTTCCCTTCAGATGCAGTATGTGATGGGGATGGTATACTAGCAGATTCAGGTTTCAATATGTAATAGAGATCGAGCTGTGTGATAAGATAGATGAGCATACATGTGTGGGCTGTTGGAGTTGAGCTAGAGATTTTGCAATATATTCTTAAATGATATTTATATTTTTTGATTCCTGTCTTCATCGGCATATGCCTAAGCAGGTTTATGCAGCGACGAACCAGAAAGTTGTAACCGCCATGTTTTTTTGAAGTTTAGTGTATCAATGATACTCCCCTGAGAATACATGGGTTAAATTTTACT</genome_strand>
        <mrna_strand>AGAAATATGCTTTGCCCTATCGTGTACTTGATGCCATGGTAGCACACTTCAATGAATTTCTTTTGATGAAACAAGAGTCATGCCTGTGATCTGGCACCTGTCACTTCTTGTATTTGTGCAGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAAAACTGAGATGAGGAAGGAGGATAAAGCTAACATAAGGGCACTTGTTGAAAGACAAAGACATAGATTG...........................................................................................ATTACACCAGATATATTGAGGGAAATCGAAAAGAGCAGAAGTCGTGGGGAAAAGGAGGATGATCCAATGTTAATTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTCCTCTTTCTGTGATCAATAAAGCAATTGAAGAAGATAGGTTTGATATCCCCGATGTTCCTATGGAGGAGGACTAGATTTTCTCAGCAACCTCTATACGTG...................................................................................................ATGCAGTATGTGATGGGGATGGTATACTAGCAGATTCAGGTTTCAATATGTAATAGAGATCGAGCTGTGTGATAAGATAGATGAGCATACATGTGTGGGCTGTTGGAGTTGAGCTAGAGATTTTGCAATATATTCTTAAATGATATTTATATTTTTTGATTCCTGTCTTCATCGGCATATGCCTAAGCAGGTTTATGCAGCGACGAACCAGAAAGTTGTAACCGCCATGTTTTTTTGAAGTTTAGTGTATCAATGATACTCCCCTGAGAATACATGGGTTAAATTTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-98Fe43/lycopersicum_combined_unigene_seqs" ref_id="SGN-U336397" ref_strand="+" ref_description="SGN-U336397        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | bystin family, contains Pfam profile: PF05291 Bystin | chr1:11331157-11333519 REVERSE | Aliases: F27M3.14, F27M3_14(evalue: 1e-05, score=46.6)">
      <seq>accgaggcacttgttgaaagaaaaagacatagattgattacaccagatatattgagggaaatcgaaaagagcagaagtcgtggggaaaaggaggatgatccaatgttaattgatatcctctcattgatggtttaaatctttctgttaccatatctgcttgagcttaatttggtctgtttatacctgtgtcgcctgctcttgccataacatagtcgggttcttaatgttttaaaaactgttgatgaaataaaaaatctttaaacctttcgtgcccagttcatgccttaaattctgctatttcctgtgagtgccgtgccatatctgcatcgatggaataggttgtcatgcaccaacaacaatcttctgtttgtaagttttgtgtattgttgaagtttgttgctttttgcaagatggataatttttaaattgtttatttcctgttgttctgtaacgactgaagtaaaatagtagatgtagctatgatttattcatgttgctattaatattttttctgctgcatcattggaaaatatattttctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0220H02-y5Yru/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0220H02.1" temp_strand="+" temp_description="C07HBa0220H02.1  AC212638.1 htgs_phase:1 submitted_to_sgn_as:gi|158262133|gb|AC212638.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0220H02, *** SEQUENCING IN PROGRESS ***, 9 unordered pieces">
        <position start="102727" stop="103946"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103022" g_stop="103057" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="36" r_length="36" r_score="0.861"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103058" i_stop="103148" i_length="91">
            <donor d_prob="0.946" d_score="0.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103149" g_stop="103646" g_length="498"/>
          <reference_exon_boundary r_type="cDNA" r_start="37" r_stop="541" r_length="505" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0220H02.1" gen_strand="+" ref_id="SGN-U336397" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>534</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0220H02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U336397" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103022" e_stop="103057"/>
          <exon e_start="103149" e_stop="103646"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAAGGGCACTTGTTGAAAGACAAAGACATAGATTGGTATGCTTTTGTATTTTATTTTTTCGTTGCTGCTGTTCTGTTTTCTGTTGATGCAAGCAAATTCAAGTTATGTTTGTGCTTCCAAATGCAGATTACACCAGATATATTGAGGGAAATCGAAAAGAGCAGAAGTCGTGGGGAAAAGGAGGATGATCCAATGTTAATTGATATCCTCTCATTGATGGTTTAAATCTTTCTGTTA-CATATCTGCTTGAGCTTAATTTGGTCTGTTTATA-CTGTGTCGCCTGCTCTTGCCATAACATAGTCGGGTTCTTAATGTTTTAAAAACTGTTGATGAAATAAAAAATCTTTAAACCTTTCGTG-CCAGTTCATG-CTTAAATTCTGCTATTTCCTGTGAGTG-CGTG-CATATCTGCATCGATGGAATAGGTTGTCATGCA-CAACAACAATCTTCTGTTTGTAAGTTTTGTGTATTGTTGAAGTTTGTTGCTTTTTGCAAGATGGATAATTTTTAAATTGTTTATTTCCTGTTGTTCTGTAACGACTGAAGTAAAATAGTAGATGTAGCTATGATTTATTCATGTTGCTATTAATATTTTTTCTGCTGCATCATTGGAAAATATATTTTCTT</genome_strand>
        <mrna_strand>ACCGAGGCACTTGTTGAAAGAAAAAGACATAGATTG...........................................................................................ATTACACCAGATATATTGAGGGAAATCGAAAAGAGCAGAAGTCGTGGGGAAAAGGAGGATGATCCAATGTTAATTGATATCCTCTCATTGATGGTTTAAATCTTTCTGTTACCATATCTGCTTGAGCTTAATTTGGTCTGTTTATACCTGTGTCGCCTGCTCTTGCCATAACATAGTCGGGTTCTTAATGTTTTAAAAACTGTTGATGAAATAAAAAATCTTTAAACCTTTCGTGCCCAGTTCATGCCTTAAATTCTGCTATTTCCTGTGAGTGCCGTGCCATATCTGCATCGATGGAATAGGTTGTCATGCACCAACAACAATCTTCTGTTTGTAAGTTTTGTGTATTGTTGAAGTTTGTTGCTTTTTGCAAGATGGATAATTTTTAAATTGTTTATTTCCTGTTGTTCTGTAACGACTGAAGTAAAATAGTAGATGTAGCTATGATTTATTCATGTTGCTATTAATATTTTTTCTGCTGCATCATTGGAAAATATATTTTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-98Fe43/lycopersicum_combined_unigene_seqs" ref_id="SGN-U315869" ref_strand="+" ref_description="SGN-U315869        Tomato 200607 #1 [23 ESTs aligned] arabidopsis/peptide: | Symbol: None | 9-cis-epoxycarotenoid dioxygenase, putative / neoxanthin cleavage enzyme, putative / carotenoid cleavage dioxygenase, putative, similar to 9-cis-epoxycarotenoid dioxygenase GB:AAF26356 (GI:6715257)(Phaseolus vulgaris) | chr3:4831295-4833606 REVERSE | Aliases: MOA2.4(evalue: 0, score=864) genbank/nr: gi|28974077|emb|CAD30202.1| 9-cis-epoxycarotenoid dioxygenase [Lycopersicon esculentum] >gi|2769642|emb|CAB10168.1| nine-cis-epoxycarotenoid dioxygenase [Lycopersicon esculentum] (evalue: 0, score=1198)">
      <seq>aaaaaaaaaaaatcccctttccacaacaccaaattgtactattaacatccaaaaaaaagaaaaagaaaataggtagctatggcaactactacttcacatgccacaaatacatggattaagactaagttgtcaatgccatcatcaaaggagtttggttttgcatcaaactctatttctctactcaaaaatcaacataataggcaaagtctcaacattaattcctctcttcaagctccacctatacttcattttcctaaacaatcttcaaattatcaaacaccaaagaataatacaatttcacacccaaaacaagaaaacaacaactcctcttcttcttcaacttccaagtggaatttagtgcagaaagcagcagcaatggctttagatgctgtagaaagtgctttaactaaacatgaacttgaacaccctttgccgaaaacagccgacccacgagtccagatttctgggaattttgctccggtaccggaaaatccagtctgtcaatctcttccggtcaccggaaaaatacccaaatgtgttcaaggcgtttacgttcgaaacggagctaaccctctttttgaaccaaccgccggacaccatttcttcgacggcgacggtatggttcacgccgttcaattcaaaaatgggtcggctagttacgcttgccgtttcactgaaacagagaggcttgttcaagaaaaagctttgggtcgccctgttttccctaaagccattggtgaattacatggtcactctggaattgcaaggcttatgctgttttacgctcgtgggctcttcggacttgttgatcacagtaaaggaactggtgttgcaaacgccggtttagtctatttcaataaccgattacttgctatgtctgaagatgatttgccttaccatgtaaaggtaacacccaccggcgatcttaaaacagagggtcgattcgatttcgacggccagctaaaatccaccatgatagctcacccaaagctcgacccagtttccggtgagctatttgctcttagctacgatgtgattcagaagccatacctcaagtacttcagattttcaaaaaatggggaaaaatcaaatgatgttgaaattccagttgaagacccaacaatgatgcatgatttcgcaattactgagaacttcgtcgtcattcctgatcaacaagtcgttttcaagatgtctgaaatgatccgtggaggttcaccggtggtttacgacaagaacaaagtttcccgatttggtattctggataagtacgcgaaagatgggtctgatttgaaatgggttgaagtacctgattgtttctgtttccacctctggaatgcttgggaagaagcagaaacagatgaaatcgttgtaattggttcatgtatgacaccaccagactccattttcaatgaatgtgatgaagggctaaagagtgttttatccgaaatccgtctcaatttgaaaacagggaaatcaacaagaaaatccataatcgaaaacccggatgaacaagtgaatttagaagctggaatggtgaaccgaaacaaactcggaaggaaaacagagtatgcttatttggctatcgctgaaccatggccaaaagtttctggttttgcaaaagtaaacctgttcaccggtgaagttgagaaattcatttatggtgacaacaaatatggtggggaacctctttttttaccaagagaccccaacagcaaggaagaagacgatggttatattttagctttcgttcacgatgagaaagaatggaaatcagaactgcaaattgttaacgcaatgagtttgaagttggaggcaactgtgaagcttccatcaagagttccttatggatttcatggaacattcataaacgccaatgatttggcaaatcaggcatgattgtgactattactgaggaaaatttaccagagggatggtttagaatatacgtccccggaatattcctctttaatggagttcgtttctttgattatttctacatcttttttctttgtttatatagtgtgagagattctcagagaaccagttagtagcttggatgtagttagaaaatgggagctcagctggtttttttctggtgattctttcacatttgattgtgcatgagagagtatatataccttattataggaatacaatacaatgttcctgtaactatctgttttcttgtatatcaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0220H02-y5Yru/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0220H02.1" temp_strand="-" temp_description="C07HBa0220H02.1  AC212638.1 htgs_phase:1 submitted_to_sgn_as:gi|158262133|gb|AC212638.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0220H02, *** SEQUENCING IN PROGRESS ***, 9 unordered pieces">
        <position start="126325" stop="123527"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="126025" g_stop="123827" g_length="2199"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="2199" r_length="2199" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0220H02.1" gen_strand="-" ref_id="SGN-U315869" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>2199</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0220H02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U315869" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="126025" e_stop="123827"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAAAAAAAATCCCCTTTCCACAACACCAAATTGTACTATTAACATCCAAAAAAAAGAAAAAGAAAATAGGTAGCTATGGCAACTACTACTTCACATGCCACAAATACATGGATTAAGACTAAGTTGTCAATGCCATCATCAAAGGAGTTTGGTTTTGCATCAAACTCTATTTCTCTACTCAAAAATCAACATAATAGGCAAAGTCTCAACATTAATTCCTCTCTTCAAGCTCCACCTATACTTCATTTTCCTAAACAATCTTCAAATTATCAAACACCAAAGAATAATACAATTTCACACCCAAAACAAGAAAACAACAACTCCTCTTCTTCTTCAACTTCCAAGTGGAATTTAGTGCAGAAAGCAGCAGCAATGGCTTTAGATGCTGTAGAAAGTGCTTTAACTAAACATGAACTTGAACACCCTTTGCCGAAAACAGCCGACCCACGAGTCCAGATTTCTGGGAATTTTGCTCCGGTACCGGAAAATCCAGTCTGTCAATCTCTTCCGGTCACCGGAAAAATACCCAAATGTGTTCAAGGCGTTTACGTTCGAAACGGAGCTAACCCTCTTTTTGAACCAACCGCCGGACACCATTTCTTCGACGGCGACGGTATGGTTCACGCCGTTCAATTCAAAAATGGGTCGGCTAGTTACGCTTGCCGTTTCACTGAAACAGAGAGGCTTGTTCAAGAAAAAGCTTTGGGTCGCCCTGTTTTCCCTAAAGCCATTGGTGAATTACATGGTCACTCTGGAATTGCAAGGCTTATGCTGTTTTACGCTCGTGGGCTCTTCGGACTTGTTGATCACAGTAAAGGAACTGGTGTTGCAAACGCCGGTTTAGTCTATTTCAATAACCGATTACTTGCTATGTCTGAAGATGATTTGCCTTACCATGTAAAGGTAACACCCACCGGCGATCTTAAAACAGAGGGTCGATTCGATTTCGACGGCCAGCTAAAATCCACCATGATAGCTCACCCAAAGCTCGACCCAGTTTCCGGTGAGCTATTTGCTCTTAGCTACGATGTGATTCAGAAGCCATACCTCAAGTACTTCAGATTTTCAAAAAATGGGGAAAAATCAAATGATGTTGAAATTCCAGTTGAAGACCCAACAATGATGCATGATTTCGCAATTACTGAGAACTTCGTCGTCATTCCTGATCAACAAGTCGTTTTCAAGATGTCTGAAATGATCCGTGGAGGTTCACCGGTGGTTTACGACAAGAACAAAGTTTCCCGATTTGGTATTCTGGATAAGTACGCGAAAGATGGGTCTGATTTGAAATGGGTTGAAGTACCTGATTGTTTCTGTTTCCACCTCTGGAATGCTTGGGAAGAAGCAGAAACAGATGAAATCGTTGTAATTGGTTCATGTATGACACCACCAGACTCCATTTTCAATGAATGTGATGAAGGGCTAAAGAGTGTTTTATCCGAAATCCGTCTCAATTTGAAAACAGGGAAATCAACAAGAAAATCCATAATCGAAAACCCGGATGAACAAGTGAATTTAGAAGCTGGAATGGTGAACCGAAACAAACTCGGAAGGAAAACAGAGTATGCTTATTTGGCTATCGCTGAACCATGGCCAAAAGTTTCTGGTTTTGCAAAAGTAAACCTGTTCACCGGTGAAGTTGAGAAATTCATTTATGGTGACAACAAATATGGTGGGGAACCTCTTTTTTTACCAAGAGACCCCAACAGCAAGGAAGAAGACGATGGTTATATTTTAGCTTTCGTTCACGATGAGAAAGAATGGAAATCAGAACTGCAAATTGTTAACGCAATGAGTTTGAAGTTGGAGGCAACTGTGAAGCTTCCATCAAGAGTTCCTTATGGATTTCATGGAACATTCATAAACGCCAATGATTTGGCAAATCAGGCATGATTGTGACTATTACTGAGGAAAATTTACCAGAGGGATGGTTTAGAATATACGTCCCCGGAATATTCCTCTTTAATGGAGTTCGTTTCTTTGATTATTTCTACATCTTTTTTCTTTGTTTATATAGTGTGAGAGATTCTCAGAGAACCAGTTAGTAGCTTGGATGTAGTTAGAAAATGGGAGCTCAGCTGGTTTTTTTCTGGTGATTCTTTCACATTTGATTGTGCATGAGAGAGTATATATACCTTATTATAGGAATACAATACAATGTTCCTGTAACTCTCTGTTTTCTTGTATATCAAAAAA</genome_strand>
        <mrna_strand>AAAAAAAAAAAATCCCCTTTCCACAACACCAAATTGTACTATTAACATCCAAAAAAAAGAAAAAGAAAATAGGTAGCTATGGCAACTACTACTTCACATGCCACAAATACATGGATTAAGACTAAGTTGTCAATGCCATCATCAAAGGAGTTTGGTTTTGCATCAAACTCTATTTCTCTACTCAAAAATCAACATAATAGGCAAAGTCTCAACATTAATTCCTCTCTTCAAGCTCCACCTATACTTCATTTTCCTAAACAATCTTCAAATTATCAAACACCAAAGAATAATACAATTTCACACCCAAAACAAGAAAACAACAACTCCTCTTCTTCTTCAACTTCCAAGTGGAATTTAGTGCAGAAAGCAGCAGCAATGGCTTTAGATGCTGTAGAAAGTGCTTTAACTAAACATGAACTTGAACACCCTTTGCCGAAAACAGCCGACCCACGAGTCCAGATTTCTGGGAATTTTGCTCCGGTACCGGAAAATCCAGTCTGTCAATCTCTTCCGGTCACCGGAAAAATACCCAAATGTGTTCAAGGCGTTTACGTTCGAAACGGAGCTAACCCTCTTTTTGAACCAACCGCCGGACACCATTTCTTCGACGGCGACGGTATGGTTCACGCCGTTCAATTCAAAAATGGGTCGGCTAGTTACGCTTGCCGTTTCACTGAAACAGAGAGGCTTGTTCAAGAAAAAGCTTTGGGTCGCCCTGTTTTCCCTAAAGCCATTGGTGAATTACATGGTCACTCTGGAATTGCAAGGCTTATGCTGTTTTACGCTCGTGGGCTCTTCGGACTTGTTGATCACAGTAAAGGAACTGGTGTTGCAAACGCCGGTTTAGTCTATTTCAATAACCGATTACTTGCTATGTCTGAAGATGATTTGCCTTACCATGTAAAGGTAACACCCACCGGCGATCTTAAAACAGAGGGTCGATTCGATTTCGACGGCCAGCTAAAATCCACCATGATAGCTCACCCAAAGCTCGACCCAGTTTCCGGTGAGCTATTTGCTCTTAGCTACGATGTGATTCAGAAGCCATACCTCAAGTACTTCAGATTTTCAAAAAATGGGGAAAAATCAAATGATGTTGAAATTCCAGTTGAAGACCCAACAATGATGCATGATTTCGCAATTACTGAGAACTTCGTCGTCATTCCTGATCAACAAGTCGTTTTCAAGATGTCTGAAATGATCCGTGGAGGTTCACCGGTGGTTTACGACAAGAACAAAGTTTCCCGATTTGGTATTCTGGATAAGTACGCGAAAGATGGGTCTGATTTGAAATGGGTTGAAGTACCTGATTGTTTCTGTTTCCACCTCTGGAATGCTTGGGAAGAAGCAGAAACAGATGAAATCGTTGTAATTGGTTCATGTATGACACCACCAGACTCCATTTTCAATGAATGTGATGAAGGGCTAAAGAGTGTTTTATCCGAAATCCGTCTCAATTTGAAAACAGGGAAATCAACAAGAAAATCCATAATCGAAAACCCGGATGAACAAGTGAATTTAGAAGCTGGAATGGTGAACCGAAACAAACTCGGAAGGAAAACAGAGTATGCTTATTTGGCTATCGCTGAACCATGGCCAAAAGTTTCTGGTTTTGCAAAAGTAAACCTGTTCACCGGTGAAGTTGAGAAATTCATTTATGGTGACAACAAATATGGTGGGGAACCTCTTTTTTTACCAAGAGACCCCAACAGCAAGGAAGAAGACGATGGTTATATTTTAGCTTTCGTTCACGATGAGAAAGAATGGAAATCAGAACTGCAAATTGTTAACGCAATGAGTTTGAAGTTGGAGGCAACTGTGAAGCTTCCATCAAGAGTTCCTTATGGATTTCATGGAACATTCATAAACGCCAATGATTTGGCAAATCAGGCATGATTGTGACTATTACTGAGGAAAATTTACCAGAGGGATGGTTTAGAATATACGTCCCCGGAATATTCCTCTTTAATGGAGTTCGTTTCTTTGATTATTTCTACATCTTTTTTCTTTGTTTATATAGTGTGAGAGATTCTCAGAGAACCAGTTAGTAGCTTGGATGTAGTTAGAAAATGGGAGCTCAGCTGGTTTTTTTCTGGTGATTCTTTCACATTTGATTGTGCATGAGAGAGTATATATACCTTATTATAGGAATACAATACAATGTTCCTGTAACTATCTGTTTTCTTGTATATCAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>16</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="15351" PGL_stop="13537"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="15351" e_stop="14871"/>
            <exon e_start="14077" e_stop="13537"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="0.983"/>
          <exon-only e_score="0.972"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.983">
            <gDNA_exon_boundary e_start="15351" e_stop="14871" e_length="481"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="14870" i_stop="14078" i_length="793"/>
          </intron>
          <exon e_serial="2" e_score="0.972">
            <gDNA_exon_boundary e_start="14077" e_stop="13537" e_length="541"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15351" stop="14871"/>
              <exon start="14077" stop="13537"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U313386" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTGCTAACCTATTTTTATTTTTTTATATTTTGATGTTAAAGTTCTGGCTTGGCCAACTTAAGGCATCTACACCCCTATATATACTTCGTGTATGTATATACAACAAGCAAATCAATACTTTGGCAATTTTGAGATTTTTTTTCTTAATTCATACAAAATAAAATGGCTAATGATGAGGTGATTCTGTTGGATTTTTGGCCTAGCATGTATGGTATGAGGCTAAGGATTGCACTTGCTGAGAAAGAGATTAAATATGAGTACAGAGACGAGGATTTGAGGAACAAAAGTCCTCTGCTTTTGCAGATGAATCCTATTCACAAGAAAATCCCTGTTTTGATTCATAATGGCAAACCAATTTGTGAGTCTATCATTGGAGTTGAGTATATTGATGAAGTGTGGAAGGATAAAGCCCCTTTGCTCCCTTCTGATCCTTATGAGAGAGCACAAGCTAGGTTTTGGGCTGATTACATTGACAAGAAG : TTATATGCTACAGGAAGCAAGATTTATACAGCAACGGGAGACGAACAAGAGGCAGGTAAGAAAGATTTCGTAGAAATCCTTAAAGTGTTGGAGGGAGCACTTGGAGAGAAGCCTTATTATGGAGGAGATAACTTTGGTTTTGGGGATATTGCTCTCATTGGGTTCTACTGCTGGTTTCATGCTTATGAGGTTTATGGTAACTTCAGCATTGAGGCTGAGTGCCCAAACCTTGTGGCTTGGGCCAAGAGGTGCATGCAAAGGGACAGTGTGGCTAAAACTTTGCCTGACCAACATAAGATCATTGAGTTTGTAAAAATTCTTAGGGAAAAGCTTGGACTTGAATAAATAAACATATGCATATCATAGTAGTATTGAAGAAAGGCACTTCATTCTGCCTTTATCTTGTGTTGTTTCAAGATTTGAAATGTTTGTTTGGTTATAGTGTAAGTTCTATTTCTAATAGTAATAAAGGATAAGCTTGTGTCTTGTTAAATGTTGGCTTTTGTGATGAGAAGTAATTACTTTTTTTTTATCTAACACA</gDNA_template>
            <first_frame> I  A  N  L  F  L  F  F  Y  I  L  M  L  K  F  W  L  G  Q  L  K  A  S  T  P  L  Y  I  L  R  V  C  I  Y  N  K  Q  I  N  T  L  A  I  L  R  F  F  F  L  I  H  T  K  *  N  G  *  *  *  G  D  S  V  G  F  L  A  *  H  V  W  Y  E  A  K  D  C  T  C  *  E  R  D  *  I  *  V  Q  R  R  G  F  E  E  Q  K  S  S  A  F  A  D  E  S  Y  S  Q  E  N  P  C  F  D  S  *  W  Q  T  N  L  *  V  Y  H  W  S  *  V  Y  *  *  S  V  E  G  *  S  P  F  A  P  F  *  S  L  *  E  S  T  S  *  V  L  G  *  L  H  *  Q  E   : V  I  C  Y  R  K  Q  D  L  Y  S  N  G  R  R  T  R  G  R  *  E  R  F  R  R  N  P  *  S  V  G  G  S  T  W  R  E  A  L  L  W  R  R  *  L  W  F  W  G  Y  C  S  H  W  V  L  L  L  V  S  C  L  *  G  L  W  *  L  Q  H  *  G  *  V  P  K  P  C  G  L  G  Q  E  V  H  A  K  G  Q  C  G  *  N  F  A  *  P  T  *  D  H  *  V  C  K  N  S  *  G  K  A  W  T  *  I  N  K  H  M  H  I  I  V  V  L  K  K  G  T  S  F  C  L  Y  L  V  L  F  Q  D  L  K  C  L  F  G  Y  S  V  S  S  I  S  N  S  N  K  G  *  A  C  V  L  L  N  V  G  F  C  D  E  K  *  L  L  F  F  Y  L  T   </first_frame>
            <second_frame>  L  L  T  Y  F  Y  F  F  I  F  *  C  *  S  S  G  L  A  N  L  R  H  L  H  P  Y  I  Y  F  V  Y  V  Y  T  T  S  K  S  I  L  W  Q  F  *  D  F  F  S  *  F  I  Q  N  K  M  A  N  D  E  V  I  L  L  D  F  W  P  S  M  Y  G  M  R  L  R  I  A  L  A  E  K  E  I  K  Y  E  Y  R  D  E  D  L  R  N  K  S  P  L  L  L  Q  M  N  P  I  H  K  K  I  P  V  L  I  H  N  G  K  P  I  C  E  S  I  I  G  V  E  Y  I  D  E  V  W  K  D  K  A  P  L  L  P  S  D  P  Y  E  R  A  Q  A  R  F  W  A  D  Y  I  D  K  K  :  L  Y  A  T  G  S  K  I  Y  T  A  T  G  D  E  Q  E  A  G  K  K  D  F  V  E  I  L  K  V  L  E  G  A  L  G  E  K  P  Y  Y  G  G  D  N  F  G  F  G  D  I  A  L  I  G  F  Y  C  W  F  H  A  Y  E  V  Y  G  N  F  S  I  E  A  E  C  P  N  L  V  A  W  A  K  R  C  M  Q  R  D  S  V  A  K  T  L  P  D  Q  H  K  I  I  E  F  V  K  I  L  R  E  K  L  G  L  E  *  I  N  I  C  I  S  *  *  Y  *  R  K  A  L  H  S  A  F  I  L  C  C  F  K  I  *  N  V  C  L  V  I  V  *  V  L  F  L  I  V  I  K  D  K  L  V  S  C  *  M  L  A  F  V  M  R  S  N  Y  F  F  F  I  *  H  </second_frame>
            <third_frame>   C  *  P  I  F  I  F  L  Y  F  D  V  K  V  L  A  W  P  T  *  G  I  Y  T  P  I  Y  T  S  C  M  Y  I  Q  Q  A  N  Q  Y  F  G  N  F  E  I  F  F  L  N  S  Y  K  I  K  W  L  M  M  R  *  F  C  W  I  F  G  L  A  C  M  V  *  G  *  G  L  H  L  L  R  K  R  L  N  M  S  T  E  T  R  I  *  G  T  K  V  L  C  F  C  R  *  I  L  F  T  R  K  S  L  F  *  F  I  M  A  N  Q  F  V  S  L  S  L  E  L  S  I  L  M  K  C  G  R  I  K  P  L  C  S  L  L  I  L  M  R  E  H  K  L  G  F  G  L  I  T  L  T  R  S :   Y  M  L  Q  E  A  R  F  I  Q  Q  R  E  T  N  K  R  Q  V  R  K  I  S  *  K  S  L  K  C  W  R  E  H  L  E  R  S  L  I  M  E  E  I  T  L  V  L  G  I  L  L  S  L  G  S  T  A  G  F  M  L  M  R  F  M  V  T  S  A  L  R  L  S  A  Q  T  L  W  L  G  P  R  G  A  C  K  G  T  V  W  L  K  L  C  L  T  N  I  R  S  L  S  L  *  K  F  L  G  K  S  L  D  L  N  K  *  T  Y  A  Y  H  S  S  I  E  E  R  H  F  I  L  P  L  S  C  V  V  S  R  F  E  M  F  V  W  L  *  C  K  F  Y  F  *  *  *  *  R  I  S  L  C  L  V  K  C  W  L  L  *  *  E  V  I  T  F  F  L  S  N  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0220H02.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15203" stop="14871"/>
                    <exon start="14077" stop="13733"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>675</number_coding_nucleotides>
                  <number_encoded_amino_acids>225</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FIQNKMANDEVILLDFWPSMYGMRLRIALAEKEIKYEYRDEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIGVEYIDEVWKDKAPLLPSDPYERAQARFWADYIDKKLYATGSKIYTATGDEQEAGKKDFVEILKVLEGALGEKPYYGGDNFGFGDIALIGFYCWFHAYEVYGNFSIEAECPNLVAWAKRCMQRDSVAKTLPDQHKIIEFVKILREKLGLE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="29076" PGL_stop="17170"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="29076" e_stop="28548"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="29076" e_stop="28548" e_length="529"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29076" stop="28548"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U334320" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTCTTTTTCTTCATTCATACAACAAAAATGGCTAACGATGAAGTGATTCTGTTGGATTTTTGGCCTAGCATGTTTGGAATGAGGCTAAGGATTGCACTTGCTGAGAAAGAGATTATATATGAGTACAGAGATCGAGGATTTGAGGAACAAAAGTCCTCTGCTTTTGCAGATGAATCCTATTCACAAGAAAATCCCTGTTTTGATTCATAATGGCAAACCAATTTGCGAGTCTATTATTGGAGTTGAGTATATTGATGAAGTGTGGAAGGATAAAGCCCCTTTCCTCCCTTCTGATCCTTATGAGAGAGCACAAGCTAGGTTTTGGGCTGATTACATTGATAAGAAGGTAAATTCATAGTCCCTCTGTTTCAGTTAAGACGGTAAGTAACTATTCTCTTTTGGTTTGTTGAAATTTTCAGTTGTATGATTCTGGGAGGAAGCTATGGACAACAAAGGGAGAAGAGCAAGAGACAGCTAAAAAAGATTTCATAGAATGCCTTAAGGTGTTAGAGGGAGCACTTGGAGAGA</gDNA_template>
            <first_frame> F  L  F  L  H  S  Y  N  K  N  G  *  R  *  S  D  S  V  G  F  L  A  *  H  V  W  N  E  A  K  D  C  T  C  *  E  R  D  Y  I  *  V  Q  R  S  R  I  *  G  T  K  V  L  C  F  C  R  *  I  L  F  T  R  K  S  L  F  *  F  I  M  A  N  Q  F  A  S  L  L  L  E  L  S  I  L  M  K  C  G  R  I  K  P  L  S  S  L  L  I  L  M  R  E  H  K  L  G  F  G  L  I  T  L  I  R  R  *  I  H  S  P  S  V  S  V  K  T  V  S  N  Y  S  L  L  V  C  *  N  F  Q  L  Y  D  S  G  R  K  L  W  T  T  K  G  E  E  Q  E  T  A  K  K  D  F  I  E  C  L  K  V  L  E  G  A  L  G  E  </first_frame>
            <second_frame>  F  F  F  F  I  H  T  T  K  M  A  N  D  E  V  I  L  L  D  F  W  P  S  M  F  G  M  R  L  R  I  A  L  A  E  K  E  I  I  Y  E  Y  R  D  R  G  F  E  E  Q  K  S  S  A  F  A  D  E  S  Y  S  Q  E  N  P  C  F  D  S  *  W  Q  T  N  L  R  V  Y  Y  W  S  *  V  Y  *  *  S  V  E  G  *  S  P  F  P  P  F  *  S  L  *  E  S  T  S  *  V  L  G  *  L  H  *  *  E  G  K  F  I  V  P  L  F  Q  L  R  R  *  V  T  I  L  F  W  F  V  E  I  F  S  C  M  I  L  G  G  S  Y  G  Q  Q  R  E  K  S  K  R  Q  L  K  K  I  S  *  N  A  L  R  C  *  R  E  H  L  E  R </second_frame>
            <third_frame>   S  F  S  S  F  I  Q  Q  K  W  L  T  M  K  *  F  C  W  I  F  G  L  A  C  L  E  *  G  *  G  L  H  L  L  R  K  R  L  Y  M  S  T  E  I  E  D  L  R  N  K  S  P  L  L  L  Q  M  N  P  I  H  K  K  I  P  V  L  I  H  N  G  K  P  I  C  E  S  I  I  G  V  E  Y  I  D  E  V  W  K  D  K  A  P  F  L  P  S  D  P  Y  E  R  A  Q  A  R  F  W  A  D  Y  I  D  K  K  V  N  S  *  S  L  C  F  S  *  D  G  K  *  L  F  S  F  G  L  L  K  F  S  V  V  *  F  W  E  E  A  M  D  N  K  G  R  R  A  R  D  S  *  K  R  F  H  R  M  P  *  G  V  R  G  S  T  W  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0220H02.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28987" stop="28718"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>267</number_coding_nucleotides>
                  <number_encoded_amino_acids>89</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GLHLLRKRLYMSTEIEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIGVEYIDEVWKDKAPFLPSDPYERAQARFWADYIDKKVNS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0220H02.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29075" stop="28866"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFFFIHTTKMANDEVILLDFWPSMFGMRLRIALAEKEIIYEYRDRGFEEQKSSAFADESYSQENPCFDS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="28867" e_stop="28730"/>
            <exon e_start="28656" e_stop="28307"/>
            <exon e_start="25831" e_stop="25790"/>
            <exon e_start="22401" e_stop="22387"/>
            <exon e_start="18929" e_stop="18920"/>
            <exon e_start="17345" e_stop="17332"/>
            <exon e_start="17271" e_stop="17170"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.975" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.000" e_score="0.619"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.800"/>
          <exon-intron don_prob="0.900" acc_prob="0.970" e_score="0.700"/>
          <exon-intron don_prob="0.968" acc_prob="0.000" e_score="0.714"/>
          <exon-only e_score="0.833"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="28867" e_stop="28730" e_length="138"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="28729" i_stop="28657" i_length="73"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="28656" e_stop="28307" e_length="350"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.975">
            <gDNA_intron_boundary i_start="28306" i_stop="25832" i_length="2475"/>
          </intron>
          <exon e_serial="3" e_score="0.619">
            <gDNA_exon_boundary e_start="25831" e_stop="25790" e_length="42"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.000">
            <gDNA_intron_boundary i_start="25789" i_stop="22402" i_length="3388"/>
          </intron>
          <exon e_serial="4" e_score="0.800">
            <gDNA_exon_boundary e_start="22401" e_stop="22387" e_length="15"/>
          </exon>
          <intron i_serial="4" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="22386" i_stop="18930" i_length="3457"/>
          </intron>
          <exon e_serial="5" e_score="0.700">
            <gDNA_exon_boundary e_start="18929" e_stop="18920" e_length="10"/>
          </exon>
          <intron i_serial="5" don_prob="0.900" acc_prob="0.970">
            <gDNA_intron_boundary i_start="18919" i_stop="17346" i_length="1574"/>
          </intron>
          <exon e_serial="6" e_score="0.714">
            <gDNA_exon_boundary e_start="17345" e_stop="17332" e_length="14"/>
          </exon>
          <intron i_serial="6" don_prob="0.968" acc_prob="0.000">
            <gDNA_intron_boundary i_start="17331" i_stop="17272" i_length="60"/>
          </intron>
          <exon e_serial="7" e_score="0.833">
            <gDNA_exon_boundary e_start="17271" e_stop="17170" e_length="102"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28867" stop="28730"/>
              <exon start="28656" stop="28307"/>
              <exon start="25831" stop="25790"/>
              <exon start="22401" stop="22387"/>
              <exon start="18929" stop="18920"/>
              <exon start="17345" stop="17332"/>
              <exon start="17271" stop="17170"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U313388" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATGGCAAACCAATTTGCGAGTCTATTATTGGAGTTGAGTATATTGATGAAGTGTGGAAGGATAAAGCCCCTTTCCTCCCTTCTGATCCTTATGAGAGAGCACAAGCTAGGTTTTGGGCTGATTACATTGATAAGAAG : TTGTATGATTCTGGGAGGAAGCTATGGACAACAAAGGGAGAAGAGCAAGAGACAGCTAAAAAAGATTTCATAGAATGCCTTAAGGTGTTAGAGGGAGCACTTGGAGAGAAGCCTTACTTTGGAGGAGATAATTTTGGTTGTGTGGATATTGCGTTGATTGGGTACTATAGCTGGTTTTATGCTTATGAGAGTTATGCTAACATCAGTGTAGAGGCTGAGTGCCCAAAGTTTGTGGCTTGGGCCAAGAATTGTATGCTGAGGGACAGTGTGGCTAAGTCTTTGCCTGATCAACATAAGGTCTGTGAATTTGTAAAAGTGCTAAGGCAGAAGTTTGGAATTGAATAAACATA : TGGCACAAAGTCGTCTGCCTAATGACACTGGCGTTGGGTCCG : TCTTTTAATTAAATT : GTCTGATTGA : TCATGGTGCAAATA : AGTTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN</gDNA_template>
            <first_frame> N  G  K  P  I  C  E  S  I  I  G  V  E  Y  I  D  E  V  W  K  D  K  A  P  F  L  P  S  D  P  Y  E  R  A  Q  A  R  F  W  A  D  Y  I  D  K  K  :  L  Y  D  S  G  R  K  L  W  T  T  K  G  E  E  Q  E  T  A  K  K  D  F  I  E  C  L  K  V  L  E  G  A  L  G  E  K  P  Y  F  G  G  D  N  F  G  C  V  D  I  A  L  I  G  Y  Y  S  W  F  Y  A  Y  E  S  Y  A  N  I  S  V  E  A  E  C  P  K  F  V  A  W  A  K  N  C  M  L  R  D  S  V  A  K  S  L  P  D  Q  H  K  V  C  E  F  V  K  V  L  R  Q  K  F  G  I  E  *  T  Y :   G  T  K  S  S  A  *  *  H  W  R  W  V  R :   L  L  I  K  L :   S  D  *  :  S  W  C  K  * :   V  V  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F   </first_frame>
            <second_frame>  M  A  N  Q  F  A  S  L  L  L  E  L  S  I  L  M  K  C  G  R  I  K  P  L  S  S  L  L  I  L  M  R  E  H  K  L  G  F  G  L  I  T  L  I  R  S :   C  M  I  L  G  G  S  Y  G  Q  Q  R  E  K  S  K  R  Q  L  K  K  I  S  *  N  A  L  R  C  *  R  E  H  L  E  R  S  L  T  L  E  E  I  I  L  V  V  W  I  L  R  *  L  G  T  I  A  G  F  M  L  M  R  V  M  L  T  S  V  *  R  L  S  A  Q  S  L  W  L  G  P  R  I  V  C  *  G  T  V  W  L  S  L  C  L  I  N  I  R  S  V  N  L  *  K  C  *  G  R  S  L  E  L  N  K  H   : M  A  Q  S  R  L  P  N  D  T  G  V  G  S   : V  F  *  L  N   : C  L  I  D :   H  G  A  N   : K  L  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  </second_frame>
            <third_frame>   W  Q  T  N  L  R  V  Y  Y  W  S  *  V  Y  *  *  S  V  E  G  *  S  P  F  P  P  F  *  S  L  *  E  S  T  S  *  V  L  G  *  L  H  *  *  E   : V  V  *  F  W  E  E  A  M  D  N  K  G  R  R  A  R  D  S  *  K  R  F  H  R  M  P  *  G  V  R  G  S  T  W  R  E  A  L  L  W  R  R  *  F  W  L  C  G  Y  C  V  D  W  V  L  *  L  V  L  C  L  *  E  L  C  *  H  Q  C  R  G  *  V  P  K  V  C  G  L  G  Q  E  L  Y  A  E  G  Q  C  G  *  V  F  A  *  S  T  *  G  L  *  I  C  K  S  A  K  A  E  V  W  N  *  I  N  I  :  W  H  K  V  V  C  L  M  T  L  A  L  G  P  :  S  F  N  *  I  :  V  *  L   : I  M  V  Q  I  :  S  C  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0220H02.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28867" stop="28730"/>
                    <exon start="28656" stop="28312"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>480</number_coding_nucleotides>
                  <number_encoded_amino_acids>160</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NGKPICESIIGVEYIDEVWKDKAPFLPSDPYERAQARFWADYIDKKLYDSGRKLWTTKGEEQETAKKDFIECLKVLEGALGEKPYFGGDNFGCVDIALIGYYSWFYAYESYANISVEAECPKFVAWAKNCMLRDSVAKSLPDQHKVCEFVKVLRQKFGIE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="32137" PGL_stop="30496"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="32137" e_stop="31769"/>
            <exon e_start="31072" e_stop="30496"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="0.996" e_score="0.976"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.976">
            <gDNA_exon_boundary e_start="32137" e_stop="31769" e_length="369"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="0.996">
            <gDNA_intron_boundary i_start="31768" i_stop="31073" i_length="696"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="31072" e_stop="30496" e_length="577"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32137" stop="31769"/>
              <exon start="31072" stop="30496"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U313390" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAAATCAGTACTAGCAATTTTATTTCTTTCTTGTTTATTCATATATCAAAAATGGCTAACAATGAGGTGATTTTGTTGGATTTTTGGCCTAGCATGTTTGGCTTGAGGCTGAGGATTGCACTTGCTGAAAAAGAGGTTAAATATGAGTACAGAGAAGAGGATTTGCCGAACAAAAGCCCTCTGCTTTTGCAGATGAACCCTATTCACAAGAAAATCCCTGTTTTGATTCACAATGGTAAACCGATTTGTGAGTCTATTATTGGAGTTGAGTATATTGATGAAGTTTGGAAGGATAAAGCCCCTTTGCTCCCTTCTGATCCTTATGAGAGGGCACAAGCTAGGTTTTGGGCTGACTACATTGACAAGAAG : TTTTATTGGGCTTCAAGGAAGCTGTGGACAACAAAAGGAGAAGAGCTGGACGCAGCTAAGGAAGAGTTCATAGTATGCCTCAAAGTTCTGGAGGGAGCACTAGGAGACAAGCCTTATTTTGGAGGGGATAACTTTGGTTTTGTGGATATTGCTCTCATTGGGTTCTACTGTTGGTTTAGTGCCTATGAGACTTACGGTAACTTCAGCACAGAGGCTGAGAGCCCAAAGTTTGTCGCTTGGGCCAAGAGGTGTATGCAGAGGGACAGTGTGGCTAAGTCTTCGCCCGACCAACATAAGGTCCTCGAGTTTGTGAAAGTTGTTAGGCAGAGGCTTGGAATTGAATAAAAATATGCTTATGCAATTATGCATCATAATGTATTGAAAAAAGGCACTTCATTGTGCCTTCTTGTGTTGTTGTTTCAAGACTTTAAAATGTTTGTTTGGTCATAGTGTAAGTTCTACTTGCACTTGTAATAAAGGAGTCTTAGCCTGTGACTTTGTTTAGTGTGGCTTTTGTTGTCCTTGTATGTAATTGTGGAGCTTCTCCTCTTTGTAATGATAAGTAATTAATTCTTCA</gDNA_template>
            <first_frame> Q  I  S  T  S  N  F  I  S  F  L  F  I  H  I  S  K  M  A  N  N  E  V  I  L  L  D  F  W  P  S  M  F  G  L  R  L  R  I  A  L  A  E  K  E  V  K  Y  E  Y  R  E  E  D  L  P  N  K  S  P  L  L  L  Q  M  N  P  I  H  K  K  I  P  V  L  I  H  N  G  K  P  I  C  E  S  I  I  G  V  E  Y  I  D  E  V  W  K  D  K  A  P  L  L  P  S  D  P  Y  E  R  A  Q  A  R  F  W  A  D  Y  I  D  K  K  :  F  Y  W  A  S  R  K  L  W  T  T  K  G  E  E  L  D  A  A  K  E  E  F  I  V  C  L  K  V  L  E  G  A  L  G  D  K  P  Y  F  G  G  D  N  F  G  F  V  D  I  A  L  I  G  F  Y  C  W  F  S  A  Y  E  T  Y  G  N  F  S  T  E  A  E  S  P  K  F  V  A  W  A  K  R  C  M  Q  R  D  S  V  A  K  S  S  P  D  Q  H  K  V  L  E  F  V  K  V  V  R  Q  R  L  G  I  E  *  K  Y  A  Y  A  I  M  H  H  N  V  L  K  K  G  T  S  L  C  L  L  V  L  L  F  Q  D  F  K  M  F  V  W  S  *  C  K  F  Y  L  H  L  *  *  R  S  L  S  L  *  L  C  L  V  W  L  L  L  S  L  Y  V  I  V  E  L  L  L  F  V  M  I  S  N  *  F  F  </first_frame>
            <second_frame>  K  S  V  L  A  I  L  F  L  S  C  L  F  I  Y  Q  K  W  L  T  M  R  *  F  C  W  I  F  G  L  A  C  L  A  *  G  *  G  L  H  L  L  K  K  R  L  N  M  S  T  E  K  R  I  C  R  T  K  A  L  C  F  C  R  *  T  L  F  T  R  K  S  L  F  *  F  T  M  V  N  R  F  V  S  L  L  L  E  L  S  I  L  M  K  F  G  R  I  K  P  L  C  S  L  L  I  L  M  R  G  H  K  L  G  F  G  L  T  T  L  T  R  S :   F  I  G  L  Q  G  S  C  G  Q  Q  K  E  K  S  W  T  Q  L  R  K  S  S  *  Y  A  S  K  F  W  R  E  H  *  E  T  S  L  I  L  E  G  I  T  L  V  L  W  I  L  L  S  L  G  S  T  V  G  L  V  P  M  R  L  T  V  T  S  A  Q  R  L  R  A  Q  S  L  S  L  G  P  R  G  V  C  R  G  T  V  W  L  S  L  R  P  T  N  I  R  S  S  S  L  *  K  L  L  G  R  G  L  E  L  N  K  N  M  L  M  Q  L  C  I  I  M  Y  *  K  K  A  L  H  C  A  F  L  C  C  C  F  K  T  L  K  C  L  F  G  H  S  V  S  S  T  C  T  C  N  K  G  V  L  A  C  D  F  V  *  C  G  F  C  C  P  C  M  *  L  W  S  F  S  S  L  *  *  *  V  I  N  S  S </second_frame>
            <third_frame>   N  Q  Y  *  Q  F  Y  F  F  L  V  Y  S  Y  I  K  N  G  *  Q  *  G  D  F  V  G  F  L  A  *  H  V  W  L  E  A  E  D  C  T  C  *  K  R  G  *  I  *  V  Q  R  R  G  F  A  E  Q  K  P  S  A  F  A  D  E  P  Y  S  Q  E  N  P  C  F  D  S  Q  W  *  T  D  L  *  V  Y  Y  W  S  *  V  Y  *  *  S  L  E  G  *  S  P  F  A  P  F  *  S  L  *  E  G  T  S  *  V  L  G  *  L  H  *  Q  E   : V  L  L  G  F  K  E  A  V  D  N  K  R  R  R  A  G  R  S  *  G  R  V  H  S  M  P  Q  S  S  G  G  S  T  R  R  Q  A  L  F  W  R  G  *  L  W  F  C  G  Y  C  S  H  W  V  L  L  L  V  *  C  L  *  D  L  R  *  L  Q  H  R  G  *  E  P  K  V  C  R  L  G  Q  E  V  Y  A  E  G  Q  C  G  *  V  F  A  R  P  T  *  G  P  R  V  C  E  S  C  *  A  E  A  W  N  *  I  K  I  C  L  C  N  Y  A  S  *  C  I  E  K  R  H  F  I  V  P  S  C  V  V  V  S  R  L  *  N  V  C  L  V  I  V  *  V  L  L  A  L  V  I  K  E  S  *  P  V  T  L  F  S  V  A  F  V  V  L  V  C  N  C  G  A  S  P  L  C  N  D  K  *  L  I  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0220H02.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="32137" stop="31769"/>
                    <exon start="31072" stop="30728"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>711</number_coding_nucleotides>
                  <number_encoded_amino_acids>237</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QISTSNFISFLFIHISKMANNEVILLDFWPSMFGLRLRIALAEKEVKYEYREEDLPNKSPLLLQMNPIHKKIPVLIHNGKPICESIIGVEYIDEVWKDKAPLLPSDPYERAQARFWADYIDKKFYWASRKLWTTKGEELDAAKEEFIVCLKVLEGALGDKPYFGGDNFGFVDIALIGFYCWFSAYETYGNFSTEAESPKFVAWAKRCMQRDSVAKSSPDQHKVLEFVKVVRQRLGIE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="40266" PGL_stop="37997"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="40266" e_stop="40087"/>
            <exon e_start="39981" e_stop="39405"/>
            <exon e_start="38011" e_stop="37997"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.999" e_score="0.994"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.998"/>
          <exon-only e_score="0.800"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="40266" e_stop="40087" e_length="180"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="40086" i_stop="39982" i_length="105"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="39981" e_stop="39405" e_length="577"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="39404" i_stop="38012" i_length="1393"/>
          </intron>
          <exon e_serial="3" e_score="0.800">
            <gDNA_exon_boundary e_start="38011" e_stop="37997" e_length="15"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40266" stop="40087"/>
              <exon start="39981" stop="39405"/>
              <exon start="38011" stop="37997"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U313389" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATACTTCAAACATGTTTAGTCCTACGCGTGTAGGGTATTAAAGTTTCAGACAAGTAAAAATGAAAGTGTTAATCCACACTTCATAAACTAGTGTTCTCCCTACTCCAGATGCTCAATCCTAGGTCCCAGATCCAAATGCTCAATCCTAGTTGTGTTAGAGTTTCACTAGTGTTGTCTAAG : TTGTATGTTTCTGCAAGAAAGATATGGGGAACAAAGGGAGAAGAGCAGGAGGCAGGTAAGAAAGATTTCATAGAAGTACTTAAAGTGTTGGAGGGAGAACTTGGAGAGAAGCCTTATTTTGGAGGAGATAATTTTGGTTTTGTGGATATTGCTTTGATTGGGTTCTATAGCTGGTTTTATGCTTATGAGACTTATGGTAACTTCAGCGCAGAGGCTGAGTGTCCAAAGTTTGTGGCTTGGGCTAAGAGGTGCATGCAAAGGGACAGTGTGGCCAAGTCTTTGCCTGACCAACATAAGGTCCTTGAGTTTATACAAATGCTAAGGCGGAAGTTTGGAATTGAATAAACATATGCATAATAATGTGTATTTGAATAAAGCACTTCATTTTGCCTTGTTGAGTTGTTTCAAGATTTGAAATTGTTTGTTCTTTTGGTCATAGTGTAAGTTCTGCTTTTACTTTTGAATTTTGTGTCTTCATCTGAACTTGTTACTTTGACTGGATGATTGATATGAGTGATTTGATGTTTGGTTTTGCGATTATTGCATCATAATGATTTGCTTTTTTTTTAAAAAAAAG : AAATTAAAAAAAAAT</gDNA_template>
            <first_frame> I  L  Q  T  C  L  V  L  R  V  *  G  I  K  V  S  D  K  *  K  *  K  C  *  S  T  L  H  K  L  V  F  S  L  L  Q  M  L  N  P  R  S  Q  I  Q  M  L  N  P  S  C  V  R  V  S  L  V  L  S  K  :  L  Y  V  S  A  R  K  I  W  G  T  K  G  E  E  Q  E  A  G  K  K  D  F  I  E  V  L  K  V  L  E  G  E  L  G  E  K  P  Y  F  G  G  D  N  F  G  F  V  D  I  A  L  I  G  F  Y  S  W  F  Y  A  Y  E  T  Y  G  N  F  S  A  E  A  E  C  P  K  F  V  A  W  A  K  R  C  M  Q  R  D  S  V  A  K  S  L  P  D  Q  H  K  V  L  E  F  I  Q  M  L  R  R  K  F  G  I  E  *  T  Y  A  *  *  C  V  F  E  *  S  T  S  F  C  L  V  E  L  F  Q  D  L  K  L  F  V  L  L  V  I  V  *  V  L  L  L  L  L  N  F  V  S  S  S  E  L  V  T  L  T  G  *  L  I  *  V  I  *  C  L  V  L  R  L  L  H  H  N  D  L  L  F  F  *  K  K   : E  I  K  K  K  </first_frame>
            <second_frame>  Y  F  K  H  V  *  S  Y  A  C  R  V  L  K  F  Q  T  S  K  N  E  S  V  N  P  H  F  I  N  *  C  S  P  Y  S  R  C  S  I  L  G  P  R  S  K  C  S  I  L  V  V  L  E  F  H  *  C  C  L  S :   C  M  F  L  Q  E  R  Y  G  E  Q  R  E  K  S  R  R  Q  V  R  K  I  S  *  K  Y  L  K  C  W  R  E  N  L  E  R  S  L  I  L  E  E  I  I  L  V  L  W  I  L  L  *  L  G  S  I  A  G  F  M  L  M  R  L  M  V  T  S  A  Q  R  L  S  V  Q  S  L  W  L  G  L  R  G  A  C  K  G  T  V  W  P  S  L  C  L  T  N  I  R  S  L  S  L  Y  K  C  *  G  G  S  L  E  L  N  K  H  M  H  N  N  V  Y  L  N  K  A  L  H  F  A  L  L  S  C  F  K  I  *  N  C  L  F  F  W  S  *  C  K  F  C  F  Y  F  *  I  L  C  L  H  L  N  L  L  L  *  L  D  D  *  Y  E  *  F  D  V  W  F  C  D  Y  C  I  I  M  I  C  F  F  F  K  K  K  :  K  L  K  K  N </second_frame>
            <third_frame>   T  S  N  M  F  S  P  T  R  V  G  Y  *  S  F  R  Q  V  K  M  K  V  L  I  H  T  S  *  T  S  V  L  P  T  P  D  A  Q  S  *  V  P  D  P  N  A  Q  S  *  L  C  *  S  F  T  S  V  V  *   : V  V  C  F  C  K  K  D  M  G  N  K  G  R  R  A  G  G  R  *  E  R  F  H  R  S  T  *  S  V  G  G  R  T  W  R  E  A  L  F  W  R  R  *  F  W  F  C  G  Y  C  F  D  W  V  L  *  L  V  L  C  L  *  D  L  W  *  L  Q  R  R  G  *  V  S  K  V  C  G  L  G  *  E  V  H  A  K  G  Q  C  G  Q  V  F  A  *  P  T  *  G  P  *  V  Y  T  N  A  K  A  E  V  W  N  *  I  N  I  C  I  I  M  C  I  *  I  K  H  F  I  L  P  C  *  V  V  S  R  F  E  I  V  C  S  F  G  H  S  V  S  S  A  F  T  F  E  F  C  V  F  I  *  T  C  Y  F  D  W  M  I  D  M  S  D  L  M  F  G  F  A  I  I  A  S  *  *  F  A  F  F  L  K  K  R :   N  *  K  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0220H02.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="40194" stop="40087"/>
                    <exon start="39981" stop="39637"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>450</number_coding_nucleotides>
                  <number_encoded_amino_acids>150</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>STLHKLVFSLLQMLNPRSQIQMLNPSCVRVSLVLSKLYVSARKIWGTKGEEQEAGKKDFIEVLKVLEGELGEKPYFGGDNFGFVDIALIGFYSWFYAYETYGNFSAEAECPKFVAWAKRCMQRDSVAKSLPDQHKVLEFIQMLRRKFGIE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="55074" PGL_stop="55651"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="55074" e_stop="55651"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="55074" e_stop="55651" e_length="578"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55074" stop="55651"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U330238" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGAATTAGAGAAGAGGGTTAAGGAAATGATTGAGAAAGCCGCAGAGTTGGAGAAGAAATTGATGGAGAAGGAAAGGATTATTGCTGAAAGATTTGTTGCTAGCAATATTAATGGCATTCCTGTGGGTGATGATAGCGTTGGTTTTCTTGGTGGTGATGTAAACTTGCCAGTGGTTGCTGCATCATCTGTTGTCGCAGTTGCAGTGATTGGCGTTATTTGCTATCTTCGATACGGACGAAAAGCGTAAACCCTTAGCTTGATCTTCAATAAGTTTTAGTCTTTTTGGTTTTGTGCTGATCAAGCTTTGGAATTTACAGTTTTGATAGTTCTTTGGTTATGTTGGATTATTAGTTAACTTTTTGATCATAATCAGATAATAGATTACACTATTATGGTGCTGAAATATGTTTGTTTGTTAAGCTGGAGATAGTTGACATACTTGTAATAGTGCTTCTTTCTCATTTCTATGAATTTGATTACAATGGTTTTGTAGTTCTTTCCTTGGTGATGTAATTGCTTATAAGAGTTGCTGAATCTGTATGTTATAGTGTGTTTAAGTCGAATGATTGAATTGCTT</gDNA_template>
            <first_frame> R  N  *  R  R  G  L  R  K  *  L  R  K  P  Q  S  W  R  R  N  *  W  R  R  K  G  L  L  L  K  D  L  L  L  A  I  L  M  A  F  L  W  V  M  I  A  L  V  F  L  V  V  M  *  T  C  Q  W  L  L  H  H  L  L  S  Q  L  Q  *  L  A  L  F  A  I  F  D  T  D  E  K  R  K  P  L  A  *  S  S  I  S  F  S  L  F  G  F  V  L  I  K  L  W  N  L  Q  F  *  *  F  F  G  Y  V  G  L  L  V  N  F  L  I  I  I  R  *  *  I  T  L  L  W  C  *  N  M  F  V  C  *  A  G  D  S  *  H  T  C  N  S  A  S  F  S  F  L  *  I  *  L  Q  W  F  C  S  S  F  L  G  D  V  I  A  Y  K  S  C  *  I  C  M  L  *  C  V  *  V  E  *  L  N  C   </first_frame>
            <second_frame>  G  I  R  E  E  G  *  G  N  D  *  E  S  R  R  V  G  E  E  I  D  G  E  G  K  D  Y  C  *  K  I  C  C  *  Q  Y  *  W  H  S  C  G  *  *  *  R  W  F  S  W  W  *  C  K  L  A  S  G  C  C  I  I  C  C  R  S  C  S  D  W  R  Y  L  L  S  S  I  R  T  K  S  V  N  P  *  L  D  L  Q  *  V  L  V  F  L  V  L  C  *  S  S  F  G  I  Y  S  F  D  S  S  L  V  M  L  D  Y  *  L  T  F  *  S  *  S  D  N  R  L  H  Y  Y  G  A  E  I  C  L  F  V  K  L  E  I  V  D  I  L  V  I  V  L  L  S  H  F  Y  E  F  D  Y  N  G  F  V  V  L  S  L  V  M  *  L  L  I  R  V  A  E  S  V  C  Y  S  V  F  K  S  N  D  *  I  A  </second_frame>
            <third_frame>   E  L  E  K  R  V  K  E  M  I  E  K  A  A  E  L  E  K  K  L  M  E  K  E  R  I  I  A  E  R  F  V  A  S  N  I  N  G  I  P  V  G  D  D  S  V  G  F  L  G  G  D  V  N  L  P  V  V  A  A  S  S  V  V  A  V  A  V  I  G  V  I  C  Y  L  R  Y  G  R  K  A  *  T  L  S  L  I  F  N  K  F  *  S  F  W  F  C  A  D  Q  A  L  E  F  T  V  L  I  V  L  W  L  C  W  I  I  S  *  L  F  D  H  N  Q  I  I  D  Y  T  I  M  V  L  K  Y  V  C  L  L  S  W  R  *  L  T  Y  L  *  *  C  F  F  L  I  S  M  N  L  I  T  M  V  L  *  F  F  P  W  *  C  N  C  L  *  E  L  L  N  L  Y  V  I  V  C  L  S  R  M  I  E  L  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0220H02.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55076" stop="55321"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ELEKRVKEMIEKAAELEKKLMEKERIIAERFVASNINGIPVGDDSVGFLGGDVNLPVVAASSVVAVAVIGVICYLRYGRKA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="57643" PGL_stop="58591"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="57643" e_stop="57754"/>
            <exon e_start="58267" e_stop="58591"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.990" e_score="1.000"/>
          <exon-only e_score="0.985"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="57643" e_stop="57754" e_length="112"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.990">
            <gDNA_intron_boundary i_start="57755" i_stop="58266" i_length="512"/>
          </intron>
          <exon e_serial="2" e_score="0.985">
            <gDNA_exon_boundary e_start="58267" e_stop="58591" e_length="325"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57643" stop="57754"/>
              <exon start="58267" stop="58591"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U327107" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGCTTTCTTCTTCTTTTCTCTGTGAAAATGCAAAATTCTCACTCGTTGTGAATCTGTGGATTAGGGTTTGTATCATCAGGGCCATGGCAATGCTGCTGCCTTTTCTCCCAAG : GCCAAGTAGGATTTAATCTTGCTCCAGAAGTTTTGAGGTATTCAACTGCAAAACCAAGTTGAATTTACTGGTCCTTTTGCTTTTCTGAAGCATGTAACCCTGAACCCCTAAGTACATTGTACTTAGTTAGGGAATGAAGCCATCGGTCCGTATAGCATATAAATCTTTGTAATTATAAAGAAGAAAATTTCTTTTGCATATTCCAGTTTTTCTTTCTCTGAATTTTGTCCTATTTATTCAAATTCTGTTGCTTAATCAGTGCAAAAGCATTGTTGTACATTTAAACAATATAATATCCTTTTAGACCTTTCATCAAAGGAAGAGC</gDNA_template>
            <first_frame> S  F  L  L  L  F  S  V  K  M  Q  N  S  H  S  L  *  I  C  G  L  G  F  V  S  S  G  P  W  Q  C  C  C  L  F  S  Q   : G  Q  V  G  F  N  L  A  P  E  V  L  R  Y  S  T  A  K  P  S  *  I  Y  W  S  F  C  F  S  E  A  C  N  P  E  P  L  S  T  L  Y  L  V  R  E  *  S  H  R  S  V  *  H  I  N  L  C  N  Y  K  E  E  N  F  F  C  I  F  Q  F  F  F  L  *  I  L  S  Y  L  F  K  F  C  C  L  I  S  A  K  A  L  L  Y  I  *  T  I  *  Y  P  F  R  P  F  I  K  G  R   </first_frame>
            <second_frame>  A  F  F  F  F  S  L  *  K  C  K  I  L  T  R  C  E  S  V  D  *  G  L  Y  H  Q  G  H  G  N  A  A  A  F  S  P  K  :  A  K  *  D  L  I  L  L  Q  K  F  *  G  I  Q  L  Q  N  Q  V  E  F  T  G  P  F  A  F  L  K  H  V  T  L  N  P  *  V  H  C  T  *  L  G  N  E  A  I  G  P  Y  S  I  *  I  F  V  I  I  K  K  K  I  S  F  A  Y  S  S  F  S  F  S  E  F  C  P  I  Y  S  N  S  V  A  *  S  V  Q  K  H  C  C  T  F  K  Q  Y  N  I  L  L  D  L  S  S  K  E  E  </second_frame>
            <third_frame>   L  S  S  S  F  L  C  E  N  A  K  F  S  L  V  V  N  L  W  I  R  V  C  I  I  R  A  M  A  M  L  L  P  F  L  P  R :   P  S  R  I  *  S  C  S  R  S  F  E  V  F  N  C  K  T  K  L  N  L  L  V  L  L  L  F  *  S  M  *  P  *  T  P  K  Y  I  V  L  S  *  G  M  K  P  S  V  R  I  A  Y  K  S  L  *  L  *  R  R  K  F  L  L  H  I  P  V  F  L  S  L  N  F  V  L  F  I  Q  I  L  L  L  N  Q  C  K  S  I  V  V  H  L  N  N  I  I  S  F  *  T  F  H  Q  R  K  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0220H02.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="60686" PGL_stop="60116"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="60686" e_stop="60116"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="60686" e_stop="60116" e_length="571"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60686" stop="60116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U345018" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTAGCACTCGTATTTCCATTCGATTACATCTTAGTAGTAAGTAGATAAAGCCAAATCTAATAAGAATGGCAATGTTCATGCCTAATTTTAACCTACAACATGATCCCATTTCCACGACACAAAACACAACTCAATATTGTCACCTTCGATCAACAATCGAAAAACGAAATTCCCCGTTTTTAGTTAGTTGGTCTTTCCCTCCTCCGGGGTACGTGAAAATCAACACAGATGGCAGTTTTATGCCTAAATCAGGAGAAGCGGGATACGGAGTCATTGCGCGTGATGACAAAGGAATGTGGCTAGGTGGATTCTATGGTCGACTTGATACGAAGTCAACGTCGAGTCTGACCCCAGAGTTGTGGGCTATTCACGAGGCCCTAAGACAAGTCAAACATTGCAACTTGAAAAAAGTGATTATTGAAACCGACTCGAATGAGGCCTTGATGTTGATAAGTCGTGCCAAAAAAGTAGATGCAAATCACCCTGATCATAAGGTGATAGAAGATTGTAGGATTCTATTGTCTGAGGTCGAGACATGTCTAATTCATACGTTGAGACAAGGTAATAACTG</gDNA_template>
            <first_frame> L  A  L  V  F  P  F  D  Y  I  L  V  V  S  R  *  S  Q  I  *  *  E  W  Q  C  S  C  L  I  L  T  Y  N  M  I  P  F  P  R  H  K  T  Q  L  N  I  V  T  F  D  Q  Q  S  K  N  E  I  P  R  F  *  L  V  G  L  S  L  L  R  G  T  *  K  S  T  Q  M  A  V  L  C  L  N  Q  E  K  R  D  T  E  S  L  R  V  M  T  K  E  C  G  *  V  D  S  M  V  D  L  I  R  S  Q  R  R  V  *  P  Q  S  C  G  L  F  T  R  P  *  D  K  S  N  I  A  T  *  K  K  *  L  L  K  P  T  R  M  R  P  *  C  *  *  V  V  P  K  K  *  M  Q  I  T  L  I  I  R  *  *  K  I  V  G  F  Y  C  L  R  S  R  H  V  *  F  I  R  *  D  K  V  I  T  </first_frame>
            <second_frame>  *  H  S  Y  F  H  S  I  T  S  *  *  *  V  D  K  A  K  S  N  K  N  G  N  V  H  A  *  F  *  P  T  T  *  S  H  F  H  D  T  K  H  N  S  I  L  S  P  S  I  N  N  R  K  T  K  F  P  V  F  S  *  L  V  F  P  S  S  G  V  R  E  N  Q  H  R  W  Q  F  Y  A  *  I  R  R  S  G  I  R  S  H  C  A  *  *  Q  R  N  V  A  R  W  I  L  W  S  T  *  Y  E  V  N  V  E  S  D  P  R  V  V  G  Y  S  R  G  P  K  T  S  Q  T  L  Q  L  E  K  S  D  Y  *  N  R  L  E  *  G  L  D  V  D  K  S  C  Q  K  S  R  C  K  S  P  *  S  *  G  D  R  R  L  *  D  S  I  V  *  G  R  D  M  S  N  S  Y  V  E  T  R  *  *  L </second_frame>
            <third_frame>   S  T  R  I  S  I  R  L  H  L  S  S  K  *  I  K  P  N  L  I  R  M  A  M  F  M  P  N  F  N  L  Q  H  D  P  I  S  T  T  Q  N  T  T  Q  Y  C  H  L  R  S  T  I  E  K  R  N  S  P  F  L  V  S  W  S  F  P  P  P  G  Y  V  K  I  N  T  D  G  S  F  M  P  K  S  G  E  A  G  Y  G  V  I  A  R  D  D  K  G  M  W  L  G  G  F  Y  G  R  L  D  T  K  S  T  S  S  L  T  P  E  L  W  A  I  H  E  A  L  R  Q  V  K  H  C  N  L  K  K  V  I  I  E  T  D  S  N  E  A  L  M  L  I  S  R  A  K  K  V  D  A  N  H  P  D  H  K  V  I  E  D  C  R  I  L  L  S  E  V  E  T  C  L  I  H  T  L  R  Q  G  N  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0220H02.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="60642" stop="60118"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>525</number_coding_nucleotides>
                  <number_encoded_amino_acids>175</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IKPNLIRMAMFMPNFNLQHDPISTTQNTTQYCHLRSTIEKRNSPFLVSWSFPPPGYVKINTDGSFMPKSGEAGYGVIARDDKGMWLGGFYGRLDTKSTSSLTPELWAIHEALRQVKHCNLKKVIIETDSNEALMLISRAKKVDANHPDHKVIEDCRILLSEVETCLIHTLRQGNN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="65581" PGL_stop="62405"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="65581" e_stop="65504"/>
            <exon e_start="65289" e_stop="65171"/>
            <exon e_start="65004" e_stop="64900"/>
            <exon e_start="64798" e_stop="64596"/>
            <exon e_start="64188" e_stop="64065"/>
            <exon e_start="63951" e_stop="63767"/>
            <exon e_start="62712" e_stop="62405"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.985" acc_prob="0.919" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.880" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.584" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.962" e_score="1.000"/>
          <exon-intron don_prob="0.740" acc_prob="0.935" e_score="1.000"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="65581" e_stop="65504" e_length="78"/>
          </exon>
          <intron i_serial="1" don_prob="0.985" acc_prob="0.919">
            <gDNA_intron_boundary i_start="65503" i_stop="65290" i_length="214"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="65289" e_stop="65171" e_length="119"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.983">
            <gDNA_intron_boundary i_start="65170" i_stop="65005" i_length="166"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="65004" e_stop="64900" e_length="105"/>
          </exon>
          <intron i_serial="3" don_prob="0.880" acc_prob="0.998">
            <gDNA_intron_boundary i_start="64899" i_stop="64799" i_length="101"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="64798" e_stop="64596" e_length="203"/>
          </exon>
          <intron i_serial="4" don_prob="0.584" acc_prob="0.999">
            <gDNA_intron_boundary i_start="64595" i_stop="64189" i_length="407"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="64188" e_stop="64065" e_length="124"/>
          </exon>
          <intron i_serial="5" don_prob="0.994" acc_prob="0.962">
            <gDNA_intron_boundary i_start="64064" i_stop="63952" i_length="113"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="63951" e_stop="63767" e_length="185"/>
          </exon>
          <intron i_serial="6" don_prob="0.740" acc_prob="0.935">
            <gDNA_intron_boundary i_start="63766" i_stop="62713" i_length="1054"/>
          </intron>
          <exon e_serial="7" e_score="0.981">
            <gDNA_exon_boundary e_start="62712" e_stop="62405" e_length="308"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65581" stop="65504"/>
              <exon start="65289" stop="65171"/>
              <exon start="65004" stop="64900"/>
              <exon start="64798" stop="64596"/>
              <exon start="64188" stop="64065"/>
              <exon start="63951" stop="63767"/>
              <exon start="62712" stop="62405"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U323479" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGGAGCGTTACACTGGCTACACTGGTCCCTCGGCCAGGCGAATATGGGATGCTATATACTCGGAGAATTGTCCAAAAT : ATGCATCTGGAGAGATTTGCCAGGAGAAAAAGGTTTTATACAAACTTATATCTGGTCTCCACTCCTCAATCTCAATACACATAGCTGCTGATTACCTGCTTGATGAAACTAAAAACCAG : TGGGGTACAAATCCAGATCTGATGTATGATCGTGTTCTACAATATCCTGAACGTGTCCGAAACTTGTATTTTACTTTCCTCTTTGTTCTCCGAGCTGTAACAAAA : GCAAAAGATTACTTGGAGCAAGCTGAGTATGATACTGGCAATCCTGAGGAAGACCTTAAAGCACAGTCCCTTATTCGACAGCTACTATACAACCCCAAACTGCAGGCTGCATGTCCAGTTCCGTTTGACGAAGCTAAACTGTGGAAAGGCCAAAGTGGACCTGAGCTAAAGCAGCAGATTCAAAAGCAATTCAGGAATATTAG : TGCTCTCATGGATTGTGTAGGATGTGAGAAATGTCGACTGTGGGGAAAGCTCCAGGTTCTTGGTCTTGGAACTGCATTAAAGATTCTCTTCTCAGTTGATGGTGAATATCGTCAAGATCAACAT : CTGCAGTTGCAAAGAAATGAAGTGATTGCTCTTGTAAACCTACTTAATCGGCTATCAGAATCTATCAAGCTAGTACAGGAAATGAGCCCTACATATGAGAAGACAATGAAGGGGCTAAGTCTACAGCCAGCTGCTAAGTTTATAAGTTCGTGGAATAGACTATTGAAAACTGTACTAGGAGATAG : GTTGAGGAAGCTTACATGATATTGATATAATTTTGGTGTACAATGATGTAAAGAATGAATACAACTAAACTATTGAAAGGTGAGAAGATTTCTACAGCCGGATAGCATACAGGGATACACGGATTTATCGCGGGAACAGTGTTCGAAATTTGGAAATACAGAATCCATTACTAGGTGAACTGGAAAATTAGTAGTGTTCTGTCACTTGATCATGTGTAACTTTGAAATGTTGTAACATTATTGTTGAAACTATATCTCTGTGTTTCCTCAATGAGAAGTGACAATTTTGCTCCTAATATGAAGACAAT</gDNA_template>
            <first_frame> R  S  V  T  L  A  T  L  V  P  R  P  G  E  Y  G  M  L  Y  T  R  R  I  V  Q  N  :  M  H  L  E  R  F  A  R  R  K  R  F  Y  T  N  L  Y  L  V  S  T  P  Q  S  Q  Y  T  *  L  L  I  T  C  L  M  K  L  K  T  S :   G  V  Q  I  Q  I  *  C  M  I  V  F  Y  N  I  L  N  V  S  E  T  C  I  L  L  S  S  L  F  S  E  L  *  Q  K :   Q  K  I  T  W  S  K  L  S  M  I  L  A  I  L  R  K  T  L  K  H  S  P  L  F  D  S  Y  Y  T  T  P  N  C  R  L  H  V  Q  F  R  L  T  K  L  N  C  G  K  A  K  V  D  L  S  *  S  S  R  F  K  S  N  S  G  I  L   : V  L  S  W  I  V  *  D  V  R  N  V  D  C  G  E  S  S  R  F  L  V  L  E  L  H  *  R  F  S  S  Q  L  M  V  N  I  V  K  I  N  I :   C  S  C  K  E  M  K  *  L  L  L  *  T  Y  L  I  G  Y  Q  N  L  S  S  *  Y  R  K  *  A  L  H  M  R  R  Q  *  R  G  *  V  Y  S  Q  L  L  S  L  *  V  R  G  I  D  Y  *  K  L  Y  *  E  I   : G  *  G  S  L  H  D  I  D  I  I  L  V  Y  N  D  V  K  N  E  Y  N  *  T  I  E  R  *  E  D  F  Y  S  R  I  A  Y  R  D  T  R  I  Y  R  G  N  S  V  R  N  L  E  I  Q  N  P  L  L  G  E  L  E  N  *  *  C  S  V  T  *  S  C  V  T  L  K  C  C  N  I  I  V  E  T  I  S  L  C  F  L  N  E  K  *  Q  F  C  S  *  Y  E  D  N </first_frame>
            <second_frame>  G  A  L  H  W  L  H  W  S  L  G  Q  A  N  M  G  C  Y  I  L  G  E  L  S  K  I :   C  I  W  R  D  L  P  G  E  K  G  F  I  Q  T  Y  I  W  S  P  L  L  N  L  N  T  H  S  C  *  L  P  A  *  *  N  *  K  P   : V  G  Y  K  S  R  S  D  V  *  S  C  S  T  I  S  *  T  C  P  K  L  V  F  Y  F  P  L  C  S  P  S  C  N  K   : S  K  R  L  L  G  A  S  *  V  *  Y  W  Q  S  *  G  R  P  *  S  T  V  P  Y  S  T  A  T  I  Q  P  Q  T  A  G  C  M  S  S  S  V  *  R  S  *  T  V  E  R  P  K  W  T  *  A  K  A  A  D  S  K  A  I  Q  E  Y  *  :  C  S  H  G  L  C  R  M  *  E  M  S  T  V  G  K  A  P  G  S  W  S  W  N  C  I  K  D  S  L  L  S  *  W  *  I  S  S  R  S  T   : S  A  V  A  K  K  *  S  D  C  S  C  K  P  T  *  S  A  I  R  I  Y  Q  A  S  T  G  N  E  P  Y  I  *  E  D  N  E  G  A  K  S  T  A  S  C  *  V  Y  K  F  V  E  *  T  I  E  N  C  T  R  R  *  :  V  E  E  A  Y  M  I  L  I  *  F  W  C  T  M  M  *  R  M  N  T  T  K  L  L  K  G  E  K  I  S  T  A  G  *  H  T  G  I  H  G  F  I  A  G  T  V  F  E  I  W  K  Y  R  I  H  Y  *  V  N  W  K  I  S  S  V  L  S  L  D  H  V  *  L  *  N  V  V  T  L  L  L  K  L  Y  L  C  V  S  S  M  R  S  D  N  F  A  P  N  M  K  T   </second_frame>
            <third_frame>   E  R  Y  T  G  Y  T  G  P  S  A  R  R  I  W  D  A  I  Y  S  E  N  C  P  K   : Y  A  S  G  E  I  C  Q  E  K  K  V  L  Y  K  L  I  S  G  L  H  S  S  I  S  I  H  I  A  A  D  Y  L  L  D  E  T  K  N  Q  :  W  G  T  N  P  D  L  M  Y  D  R  V  L  Q  Y  P  E  R  V  R  N  L  Y  F  T  F  L  F  V  L  R  A  V  T  K  :  A  K  D  Y  L  E  Q  A  E  Y  D  T  G  N  P  E  E  D  L  K  A  Q  S  L  I  R  Q  L  L  Y  N  P  K  L  Q  A  A  C  P  V  P  F  D  E  A  K  L  W  K  G  Q  S  G  P  E  L  K  Q  Q  I  Q  K  Q  F  R  N  I  S :   A  L  M  D  C  V  G  C  E  K  C  R  L  W  G  K  L  Q  V  L  G  L  G  T  A  L  K  I  L  F  S  V  D  G  E  Y  R  Q  D  Q  H  :  L  Q  L  Q  R  N  E  V  I  A  L  V  N  L  L  N  R  L  S  E  S  I  K  L  V  Q  E  M  S  P  T  Y  E  K  T  M  K  G  L  S  L  Q  P  A  A  K  F  I  S  S  W  N  R  L  L  K  T  V  L  G  D  R :   L  R  K  L  T  *  Y  *  Y  N  F  G  V  Q  *  C  K  E  *  I  Q  L  N  Y  *  K  V  R  R  F  L  Q  P  D  S  I  Q  G  Y  T  D  L  S  R  E  Q  C  S  K  F  G  N  T  E  S  I  T  R  *  T  G  K  L  V  V  F  C  H  L  I  M  C  N  F  E  M  L  *  H  Y  C  *  N  Y  I  S  V  F  P  Q  *  E  V  T  I  L  L  L  I  *  R  Q  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0220H02.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="65579" stop="65504"/>
                    <exon start="65289" stop="65171"/>
                    <exon start="65004" stop="64900"/>
                    <exon start="64798" stop="64596"/>
                    <exon start="64188" stop="64065"/>
                    <exon start="63951" stop="63767"/>
                    <exon start="62712" stop="62694"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>828</number_coding_nucleotides>
                  <number_encoded_amino_acids>276</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ERYTGYTGPSARRIWDAIYSENCPKYASGEICQEKKVLYKLISGLHSSISIHIAADYLLDETKNQWGTNPDLMYDRVLQYPERVRNLYFTFLFVLRAVTKAKDYLEQAEYDTGNPEEDLKAQSLIRQLLYNPKLQAACPVPFDEAKLWKGQSGPELKQQIQKQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSVDGEYRQDQHLQLQRNEVIALVNLLNRLSESIKLVQEMSPTYEKTMKGLSLQPAAKFISSWNRLLKTVLGDRLRKLT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="67839" PGL_stop="65598"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="67839" e_stop="67515"/>
            <exon e_start="66756" e_stop="66625"/>
            <exon e_start="66167" e_stop="65912"/>
            <exon e_start="65614" e_stop="65598"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.901" acc_prob="0.986" e_score="0.994"/>
          <exon-intron don_prob="0.906" acc_prob="0.952" e_score="1.000"/>
          <exon-intron don_prob="0.960" acc_prob="0.989" e_score="0.996"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="67839" e_stop="67515" e_length="325"/>
          </exon>
          <intron i_serial="1" don_prob="0.901" acc_prob="0.986">
            <gDNA_intron_boundary i_start="67514" i_stop="66757" i_length="758"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="66756" e_stop="66625" e_length="132"/>
          </exon>
          <intron i_serial="2" don_prob="0.906" acc_prob="0.952">
            <gDNA_intron_boundary i_start="66624" i_stop="66168" i_length="457"/>
          </intron>
          <exon e_serial="3" e_score="0.996">
            <gDNA_exon_boundary e_start="66167" e_stop="65912" e_length="256"/>
          </exon>
          <intron i_serial="3" don_prob="0.960" acc_prob="0.989">
            <gDNA_intron_boundary i_start="65911" i_stop="65615" i_length="297"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="65614" e_stop="65598" e_length="17"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67839" stop="67515"/>
              <exon start="66756" stop="66625"/>
              <exon start="66167" stop="65912"/>
              <exon start="65614" stop="65598"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U327845" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTCATCGGTTCTTCAAATATAACGGCTTCGATTCTGCGAATTAACAGTAGTTGACACTGAAATTCGTTTCATAATTCAACGAATAAGAGTTTAATTAGTGTTTTTTTGATTTTTTTGGGTCGAAGATTTTAGGGGTTTTGTGGAAGAATTGTTGTGATGGTGGAAGAAAATGAAGTTAACGAGCTGAAGAAGACGGAGAATGAGAAGAGGAGAAGTGGGTGGCGATTGGGTCGATCAGCAATTGCAGCGATTTTGGTGTTGATGATAGCATTTGGTGTGACTTTTTTGTATACAGAGGAGGGAAAATCATGTCCTTGTTTTCAG : GACTCTAGAAAATATACTGGGATAGTTGAAGACTGTTGTTGTGATTATGAAACCGTTGACGCTATTAATGGCGCTGTGCTGCATCCTTTACTCCAAGGGCTTGTTACAACTCCCTTCTTTAGATACTTTAAG : GTTAAGCTGTGGTGTGACTGCCCTTTTTGGCCTGATGATGGTATGTGTAAGTTACGAGATTGCAGTGTATGCGAATGTCCAGAAACTGAGTTCCCCGAATCTTTTAGGAGACCTCCACTTGGCCTTGCTGCTGATGATCTGAAATGCCAAGAGGGAAAACCAGAGGCAGCTGTTGACCGCACTCTCGACTCCAAGGTTTTTAGGGGATGGATAGAGGTAGATAATCCTTGGACAGTTGATGATGAAACAGATAATG : GTGAGATGACATATGTC</gDNA_template>
            <first_frame> I  H  R  F  F  K  Y  N  G  F  D  S  A  N  *  Q  *  L  T  L  K  F  V  S  *  F  N  E  *  E  F  N  *  C  F  F  D  F  F  G  S  K  I  L  G  V  L  W  K  N  C  C  D  G  G  R  K  *  S  *  R  A  E  E  D  G  E  *  E  E  E  K  W  V  A  I  G  S  I  S  N  C  S  D  F  G  V  D  D  S  I  W  C  D  F  F  V  Y  R  G  G  K  I  M  S  L  F  S   : G  L  *  K  I  Y  W  D  S  *  R  L  L  L  *  L  *  N  R  *  R  Y  *  W  R  C  A  A  S  F  T  P  R  A  C  Y  N  S  L  L  *  I  L  *   : G  *  A  V  V  *  L  P  F  L  A  *  *  W  Y  V  *  V  T  R  L  Q  C  M  R  M  S  R  N  *  V  P  R  I  F  *  E  T  S  T  W  P  C  C  *  *  S  E  M  P  R  G  K  T  R  G  S  C  *  P  H  S  R  L  Q  G  F  *  G  M  D  R  G  R  *  S  L  D  S  *  *  *  N  R  *  W :   *  D  D  I  C  </first_frame>
            <second_frame>  F  I  G  S  S  N  I  T  A  S  I  L  R  I  N  S  S  *  H  *  N  S  F  H  N  S  T  N  K  S  L  I  S  V  F  L  I  F  L  G  R  R  F  *  G  F  C  G  R  I  V  V  M  V  E  E  N  E  V  N  E  L  K  K  T  E  N  E  K  R  R  S  G  W  R  L  G  R  S  A  I  A  A  I  L  V  L  M  I  A  F  G  V  T  F  L  Y  T  E  E  G  K  S  C  P  C  F  Q  :  D  S  R  K  Y  T  G  I  V  E  D  C  C  C  D  Y  E  T  V  D  A  I  N  G  A  V  L  H  P  L  L  Q  G  L  V  T  T  P  F  F  R  Y  F  K  :  V  K  L  W  C  D  C  P  F  W  P  D  D  G  M  C  K  L  R  D  C  S  V  C  E  C  P  E  T  E  F  P  E  S  F  R  R  P  P  L  G  L  A  A  D  D  L  K  C  Q  E  G  K  P  E  A  A  V  D  R  T  L  D  S  K  V  F  R  G  W  I  E  V  D  N  P  W  T  V  D  D  E  T  D  N   : G  E  M  T  Y  V </second_frame>
            <third_frame>   S  S  V  L  Q  I  *  R  L  R  F  C  E  L  T  V  V  D  T  E  I  R  F  I  I  Q  R  I  R  V  *  L  V  F  F  *  F  F  W  V  E  D  F  R  G  F  V  E  E  L  L  *  W  W  K  K  M  K  L  T  S  *  R  R  R  R  M  R  R  G  E  V  G  G  D  W  V  D  Q  Q  L  Q  R  F  W  C  *  *  *  H  L  V  *  L  F  C  I  Q  R  R  E  N  H  V  L  V  F  R :   T  L  E  N  I  L  G  *  L  K  T  V  V  V  I  M  K  P  L  T  L  L  M  A  L  C  C  I  L  Y  S  K  G  L  L  Q  L  P  S  L  D  T  L  R :   L  S  C  G  V  T  A  L  F  G  L  M  M  V  C  V  S  Y  E  I  A  V  Y  A  N  V  Q  K  L  S  S  P  N  L  L  G  D  L  H  L  A  L  L  L  M  I  *  N  A  K  R  E  N  Q  R  Q  L  L  T  A  L  S  T  P  R  F  L  G  D  G  *  R  *  I  I  L  G  Q  L  M  M  K  Q  I  M  :  V  R  *  H  M   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0220H02.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67706" stop="67515"/>
                    <exon start="66756" stop="66625"/>
                    <exon start="66167" stop="65912"/>
                    <exon start="65614" stop="65598"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>597</number_coding_nucleotides>
                  <number_encoded_amino_acids>199</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GFCGRIVVMVEENEVNELKKTENEKRRSGWRLGRSAIAAILVLMIAFGVTFLYTEEGKSCPCFQDSRKYTGIVEDCCCDYETVDAINGAVLHPLLQGLVTTPFFRYFKVKLWCDCPFWPDDGMCKLRDCSVCECPETEFPESFRRPPLGLAADDLKCQEGKPEAAVDRTLDSKVFRGWIEVDNPWTVDDETDNGEMTYV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="80344" PGL_stop="73141"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="80344" e_stop="79482"/>
            <exon e_start="78845" e_stop="78720"/>
            <exon e_start="73750" e_stop="73615"/>
            <exon e_start="73537" e_stop="73141"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.416" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.928" e_score="1.000"/>
          <exon-only e_score="0.985"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="80344" e_stop="79482" e_length="863"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.416">
            <gDNA_intron_boundary i_start="79481" i_stop="78846" i_length="636"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="78845" e_stop="78720" e_length="126"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="1.000">
            <gDNA_intron_boundary i_start="78719" i_stop="73751" i_length="4969"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="73750" e_stop="73615" e_length="136"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.928">
            <gDNA_intron_boundary i_start="73614" i_stop="73538" i_length="77"/>
          </intron>
          <exon e_serial="4" e_score="0.985">
            <gDNA_exon_boundary e_start="73537" e_stop="73141" e_length="397"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80344" stop="79482"/>
              <exon start="78845" stop="78720"/>
              <exon start="73750" stop="73615"/>
              <exon start="73537" stop="73141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U324515" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GATTCTCAGGTTTCTCCTAAAATCTTGCAAGAAGTGTTGTCAGAAAAGGTGTACATCCTTTTCTTCTCTCGTACCAAACAGAGGTCACCATCCACCAAGACATGTTTATCAATTAATGGATCAAAATCCAATCACTCCAATGGCTTGGCTAAATCCAAAATCTTGACCAGTGACTTAGCAAAAACAGTAAACGAAAAGCAAGTTTTAGGCCACCCCTCCGAGAAAGAAAATGTAGTGATGTCTAAGGTCAGTAAAGTGCATTCGAGCCCAGTGCGAGATTTGGGCATATTTGAAAAATCTTCCTTCAAGAGACCTACCTCTGGTAATATCAAAATGGTTTTTCATTCAAAAGAATCTGGCAATAGAACTGGTGATGTGAGAGCATCAGTTCTTACAGAGAAAAAGATTACATCATTATCAAACAAGAATGGTGTTAGCAAAAGTTGTGGTAATGGCCAAGGGACAAGATCACATGCCTTAACAAATGGAAATGGAAATGGAAAACTTCCAATTGTAGCAACCAGCCCTGTAGCAGACGGTCCCCATGAAGATTATGGTGGAAGTAATGGAAAGGCTGCAGGAAAGGATTCATACCACAAAGAGGTGAATAGATCATCATCTTTAGCAAATGGAAATGGTAAAATTCAAAGTGTTGCAACGGATACCTTGAGGGGAAGTCTGCATAGAAATAATGGGGAGAATAGTGAAAGCCTGGCAGCAATATCTTCTGCATACAGGGATACATCCAATGGCCATGTTGAATCGTCTTCTATCTCAGGTTCAAAGAGAAAATCACCAGATCAGTGCATCTTGCTTGAGTATGATGTTCAGTCTCGTGCAAAGGTGGAAGAATTAAAAAAAGA : GCTCCATCAGGAAGCTTCATCATTTCTAAGAACATGTGGTTGGTCAGAAGAAGTTTATGCTTTTATGCGTTCCAAAAAGTCGGGGACACAATCAAACTTTCAAGCATCAGATGTTAATGCGATGAA : GGAGTTGTTGATTGCAGATGCCAAATCAATGTTTATCTCACAAATTCCTCAATCATTGAAGGGCAGTCTTATTGAACGTTTAACATCATTTAGTCAAGGAACACCACCCTCCAGTACCTAAGCACACTTGGACATG : TCCATTGACGAAGGTGCTGATTTTCTTGGCCTGTATTCTTTGTCAGTTGGAGATGGAATGTCTGTTTGCGCAGACGATTATAAGTTGTCTTTGATTTTCTTCAGTCAGCTGTACTGTATCACCAAATGTGTTCATTCAGGTAAAAGAGGAAATCAAAGTGGCAACATCTTATTCCGGTAGACATATTTTCTTGAGAGGTAGGAGAGCCTATAGAAGCAGCGTAAATTCCTTTTGTGATGTATGATATATGCCCATTTTGCCGTAGTTTTTTAGCATGTAATCCTCATTTTATGGATGCTTACCAATTTTTTTCCATAAAATTGTGGTCGAGGTTGTATTGTTGAATCTGGAGATGAGGTTTCACTTTCGAACATACATACATTATAATACCATCCAT</gDNA_template>
            <first_frame> D  S  Q  V  S  P  K  I  L  Q  E  V  L  S  E  K  V  Y  I  L  F  F  S  R  T  K  Q  R  S  P  S  T  K  T  C  L  S  I  N  G  S  K  S  N  H  S  N  G  L  A  K  S  K  I  L  T  S  D  L  A  K  T  V  N  E  K  Q  V  L  G  H  P  S  E  K  E  N  V  V  M  S  K  V  S  K  V  H  S  S  P  V  R  D  L  G  I  F  E  K  S  S  F  K  R  P  T  S  G  N  I  K  M  V  F  H  S  K  E  S  G  N  R  T  G  D  V  R  A  S  V  L  T  E  K  K  I  T  S  L  S  N  K  N  G  V  S  K  S  C  G  N  G  Q  G  T  R  S  H  A  L  T  N  G  N  G  N  G  K  L  P  I  V  A  T  S  P  V  A  D  G  P  H  E  D  Y  G  G  S  N  G  K  A  A  G  K  D  S  Y  H  K  E  V  N  R  S  S  S  L  A  N  G  N  G  K  I  Q  S  V  A  T  D  T  L  R  G  S  L  H  R  N  N  G  E  N  S  E  S  L  A  A  I  S  S  A  Y  R  D  T  S  N  G  H  V  E  S  S  S  I  S  G  S  K  R  K  S  P  D  Q  C  I  L  L  E  Y  D  V  Q  S  R  A  K  V  E  E  L  K  K  E :   L  H  Q  E  A  S  S  F  L  R  T  C  G  W  S  E  E  V  Y  A  F  M  R  S  K  K  S  G  T  Q  S  N  F  Q  A  S  D  V  N  A  M  K :   E  L  L  I  A  D  A  K  S  M  F  I  S  Q  I  P  Q  S  L  K  G  S  L  I  E  R  L  T  S  F  S  Q  G  T  P  P  S  S  T  *  A  H  L  D  M  :  S  I  D  E  G  A  D  F  L  G  L  Y  S  L  S  V  G  D  G  M  S  V  C  A  D  D  Y  K  L  S  L  I  F  F  S  Q  L  Y  C  I  T  K  C  V  H  S  G  K  R  G  N  Q  S  G  N  I  L  F  R  *  T  Y  F  L  E  R  *  E  S  L  *  K  Q  R  K  F  L  L  *  C  M  I  Y  A  H  F  A  V  V  F  *  H  V  I  L  I  L  W  M  L  T  N  F  F  P  *  N  C  G  R  G  C  I  V  E  S  G  D  E  V  S  L  S  N  I  H  T  L  *  Y  H  P  </first_frame>
            <second_frame>  I  L  R  F  L  L  K  S  C  K  K  C  C  Q  K  R  C  T  S  F  S  S  L  V  P  N  R  G  H  H  P  P  R  H  V  Y  Q  L  M  D  Q  N  P  I  T  P  M  A  W  L  N  P  K  S  *  P  V  T  *  Q  K  Q  *  T  K  S  K  F  *  A  T  P  P  R  K  K  M  *  *  C  L  R  S  V  K  C  I  R  A  Q  C  E  I  W  A  Y  L  K  N  L  P  S  R  D  L  P  L  V  I  S  K  W  F  F  I  Q  K  N  L  A  I  E  L  V  M  *  E  H  Q  F  L  Q  R  K  R  L  H  H  Y  Q  T  R  M  V  L  A  K  V  V  V  M  A  K  G  Q  D  H  M  P  *  Q  M  E  M  E  M  E  N  F  Q  L  *  Q  P  A  L  *  Q  T  V  P  M  K  I  M  V  E  V  M  E  R  L  Q  E  R  I  H  T  T  K  R  *  I  D  H  H  L  *  Q  M  E  M  V  K  F  K  V  L  Q  R  I  P  *  G  E  V  C  I  E  I  M  G  R  I  V  K  A  W  Q  Q  Y  L  L  H  T  G  I  H  P  M  A  M  L  N  R  L  L  S  Q  V  Q  R  E  N  H  Q  I  S  A  S  C  L  S  M  M  F  S  L  V  Q  R  W  K  N  *  K  K   : S  S  I  R  K  L  H  H  F  *  E  H  V  V  G  Q  K  K  F  M  L  L  C  V  P  K  S  R  G  H  N  Q  T  F  K  H  Q  M  L  M  R  *   : R  S  C  *  L  Q  M  P  N  Q  C  L  S  H  K  F  L  N  H  *  R  A  V  L  L  N  V  *  H  H  L  V  K  E  H  H  P  P  V  P  K  H  T  W  T  C :   P  L  T  K  V  L  I  F  L  A  C  I  L  C  Q  L  E  M  E  C  L  F  A  Q  T  I  I  S  C  L  *  F  S  S  V  S  C  T  V  S  P  N  V  F  I  Q  V  K  E  E  I  K  V  A  T  S  Y  S  G  R  H  I  F  L  R  G  R  R  A  Y  R  S  S  V  N  S  F  C  D  V  *  Y  M  P  I  L  P  *  F  F  S  M  *  S  S  F  Y  G  C  L  P  I  F  F  H  K  I  V  V  E  V  V  L  L  N  L  E  M  R  F  H  F  R  T  Y  I  H  Y  N  T  I  H </second_frame>
            <third_frame>   F  S  G  F  S  *  N  L  A  R  S  V  V  R  K  G  V  H  P  F  L  L  S  Y  Q  T  E  V  T  I  H  Q  D  M  F  I  N  *  W  I  K  I  Q  S  L  Q  W  L  G  *  I  Q  N  L  D  Q  *  L  S  K  N  S  K  R  K  A  S  F  R  P  P  L  R  E  R  K  C  S  D  V  *  G  Q  *  S  A  F  E  P  S  A  R  F  G  H  I  *  K  I  F  L  Q  E  T  Y  L  W  *  Y  Q  N  G  F  S  F  K  R  I  W  Q  *  N  W  *  C  E  S  I  S  S  Y  R  E  K  D  Y  I  I  I  K  Q  E  W  C  *  Q  K  L  W  *  W  P  R  D  K  I  T  C  L  N  K  W  K  W  K  W  K  T  S  N  C  S  N  Q  P  C  S  R  R  S  P  *  R  L  W  W  K  *  W  K  G  C  R  K  G  F  I  P  Q  R  G  E  *  I  I  I  F  S  K  W  K  W  *  N  S  K  C  C  N  G  Y  L  E  G  K  S  A  *  K  *  W  G  E  *  *  K  P  G  S  N  I  F  C  I  Q  G  Y  I  Q  W  P  C  *  I  V  F  Y  L  R  F  K  E  K  I  T  R  S  V  H  L  A  *  V  *  C  S  V  S  C  K  G  G  R  I  K  K  R  :  A  P  S  G  S  F  I  I  S  K  N  M  W  L  V  R  R  S  L  C  F  Y  A  F  Q  K  V  G  D  T  I  K  L  S  S  I  R  C  *  C  D  E  :  G  V  V  D  C  R  C  Q  I  N  V  Y  L  T  N  S  S  I  I  E  G  Q  S  Y  *  T  F  N  I  I  *  S  R  N  T  T  L  Q  Y  L  S  T  L  G  H   : V  H  *  R  R  C  *  F  S  W  P  V  F  F  V  S  W  R  W  N  V  C  L  R  R  R  L  *  V  V  F  D  F  L  Q  S  A  V  L  Y  H  Q  M  C  S  F  R  *  K  R  K  S  K  W  Q  H  L  I  P  V  D  I  F  S  *  E  V  G  E  P  I  E  A  A  *  I  P  F  V  M  Y  D  I  C  P  F  C  R  S  F  L  A  C  N  P  H  F  M  D  A  Y  Q  F  F  S  I  K  L  W  S  R  L  Y  C  *  I  W  R  *  G  F  T  F  E  H  T  Y  I  I  I  P  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0220H02.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="80344" stop="79482"/>
                    <exon start="78845" stop="78720"/>
                    <exon start="73750" stop="73630"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1107</number_coding_nucleotides>
                  <number_encoded_amino_acids>369</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DSQVSPKILQEVLSEKVYILFFSRTKQRSPSTKTCLSINGSKSNHSNGLAKSKILTSDLAKTVNEKQVLGHPSEKENVVMSKVSKVHSSPVRDLGIFEKSSFKRPTSGNIKMVFHSKESGNRTGDVRASVLTEKKITSLSNKNGVSKSCGNGQGTRSHALTNGNGNGKLPIVATSPVADGPHEDYGGSNGKAAGKDSYHKEVNRSSSLANGNGKIQSVATDTLRGSLHRNNGENSESLAAISSAYRDTSNGHVESSSISGSKRKSPDQCILLEYDVQSRAKVEELKKELHQEASSFLRTCGWSEEVYAFMRSKKSGTQSNFQASDVNAMKELLIADAKSMFISQIPQSLKGSLIERLTSFSQGTPPSST*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0220H02.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="73629" stop="73615"/>
                    <exon start="73537" stop="73358"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AHLDMSIDEGADFLGLYSLSVGDGMSVCADDYKLSLIFFSQLYCITKCVHSGKRGNQSGNILFR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="90202" PGL_stop="87456"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="90202" e_stop="90081"/>
            <exon e_start="88786" e_stop="88679"/>
            <exon e_start="88600" e_stop="88566"/>
            <exon e_start="87859" e_stop="87456"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.844" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.918" e_score="1.000"/>
          <exon-intron don_prob="0.864" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="90202" e_stop="90081" e_length="122"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.844">
            <gDNA_intron_boundary i_start="90080" i_stop="88787" i_length="1294"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="88786" e_stop="88679" e_length="108"/>
          </exon>
          <intron i_serial="2" don_prob="0.992" acc_prob="0.918">
            <gDNA_intron_boundary i_start="88678" i_stop="88601" i_length="78"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="88600" e_stop="88566" e_length="35"/>
          </exon>
          <intron i_serial="3" don_prob="0.864" acc_prob="0.998">
            <gDNA_intron_boundary i_start="88565" i_stop="87860" i_length="706"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="87859" e_stop="87456" e_length="404"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90202" stop="90081"/>
              <exon start="88786" stop="88679"/>
              <exon start="88600" stop="88566"/>
              <exon start="87859" stop="87456"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U345772" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGTTTGTGAGGGATTCATAAATGGCGGATCCGCAGAGAAAATGGGTGACCGACGATGTATTAACATACGCATATCTTCTCCTCTACATTGCACTCTCTAGTGGTCAGATCTTCTTCAACAAG : TGGGTTTTGTCTTCAAAAGAAGTAAACTTTCCTTATCCCCTTGGATTGACTCTGCTTCACATGGTCTTCTCCTCAATTCTATGTTTTATGCTTACCAAGGTTCTCAAG : ATAATGAAAGTTGAGGAAGGGATGACTCTAGATAT : ATACATTAGTTCGGTCATACCAATTGGTGCAATGTTTGCAATGACACTTTGGCTTGGGAACACTGCCTACCTTTATATTTCTGTTTCATTTGCTCAAATGTTGAAAGCAATCAGTAAGTAGTACTGTTATTAGCTGGCTTATGTACTGTAGACTATAGAAGGTAAAGGTAAATACAGCTTTAGGATATGATAGGGGAGCTGTCATGCGACACTTCATGCTTGATAGATGGCTTTAGAGGCTCGGCCGATGACCATTTGCTCAAGTACTTTTTTAATTTGTGCCAAGGGCATCATCTCTCTCTCTTTTGGTTTCTTCTGCAGTGCCAGTAGCAGTTTTCATTCTGGGGGTTGCAGCCGGACTTGAAATGATGAGCTGCAGAATGCTTCTCATAATGTCAGTAATC</gDNA_template>
            <first_frame> S  L  *  G  I  H  K  W  R  I  R  R  E  N  G  *  P  T  M  Y  *  H  T  H  I  F  S  S  T  L  H  S  L  V  V  R  S  S  S  T  S :   G  F  C  L  Q  K  K  *  T  F  L  I  P  L  D  *  L  C  F  T  W  S  S  P  Q  F  Y  V  L  C  L  P  R  F  S  R :   *  *  K  L  R  K  G  *  L  *  I   : Y  T  L  V  R  S  Y  Q  L  V  Q  C  L  Q  *  H  F  G  L  G  T  L  P  T  F  I  F  L  F  H  L  L  K  C  *  K  Q  S  V  S  S  T  V  I  S  W  L  M  Y  C  R  L  *  K  V  K  V  N  T  A  L  G  Y  D  R  G  A  V  M  R  H  F  M  L  D  R  W  L  *  R  L  G  R  *  P  F  A  Q  V  L  F  *  F  V  P  R  A  S  S  L  S  L  L  V  S  S  A  V  P  V  A  V  F  I  L  G  V  A  A  G  L  E  M  M  S  C  R  M  L  L  I  M  S  V  I </first_frame>
            <second_frame>  V  C  E  G  F  I  N  G  G  S  A  E  K  M  G  D  R  R  C  I  N  I  R  I  S  S  P  L  H  C  T  L  *  W  S  D  L  L  Q  Q   : V  G  F  V  F  K  R  S  K  L  S  L  S  P  W  I  D  S  A  S  H  G  L  L  L  N  S  M  F  Y  A  Y  Q  G  S  Q   : D  N  E  S  *  G  R  D  D  S  R  Y  :  I  H  *  F  G  H  T  N  W  C  N  V  C  N  D  T  L  A  W  E  H  C  L  P  L  Y  F  C  F  I  C  S  N  V  E  S  N  Q  *  V  V  L  L  L  A  G  L  C  T  V  D  Y  R  R  *  R  *  I  Q  L  *  D  M  I  G  E  L  S  C  D  T  S  C  L  I  D  G  F  R  G  S  A  D  D  H  L  L  K  Y  F  F  N  L  C  Q  G  H  H  L  S  L  F  W  F  L  L  Q  C  Q  *  Q  F  S  F  W  G  L  Q  P  D  L  K  *  *  A  A  E  C  F  S  *  C  Q  *   </second_frame>
            <third_frame>   F  V  R  D  S  *  M  A  D  P  Q  R  K  W  V  T  D  D  V  L  T  Y  A  Y  L  L  L  Y  I  A  L  S  S  G  Q  I  F  F  N  K  :  W  V  L  S  S  K  E  V  N  F  P  Y  P  L  G  L  T  L  L  H  M  V  F  S  S  I  L  C  F  M  L  T  K  V  L  K  :  I  M  K  V  E  E  G  M  T  L  D  I :   Y  I  S  S  V  I  P  I  G  A  M  F  A  M  T  L  W  L  G  N  T  A  Y  L  Y  I  S  V  S  F  A  Q  M  L  K  A  I  S  K  *  Y  C  Y  *  L  A  Y  V  L  *  T  I  E  G  K  G  K  Y  S  F  R  I  *  *  G  S  C  H  A  T  L  H  A  *  *  M  A  L  E  A  R  P  M  T  I  C  S  S  T  F  L  I  C  A  K  G  I  I  S  L  S  F  G  F  F  C  S  A  S  S  S  F  H  S  G  G  C  S  R  T  *  N  D  E  L  Q  N  A  S  H  N  V  S  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0220H02.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90182" stop="90081"/>
                    <exon start="88786" stop="88679"/>
                    <exon start="88600" stop="88566"/>
                    <exon start="87859" stop="87739"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>363</number_coding_nucleotides>
                  <number_encoded_amino_acids>121</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MADPQRKWVTDDVLTYAYLLLYIALSSGQIFFNKWVLSSKEVNFPYPLGLTLLHMVFSSILCFMLTKVLKIMKVEEGMTLDIYISSVIPIGAMFAMTLWLGNTAYLYISVSFAQMLKAISK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="98958" PGL_stop="104154"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="98958" e_stop="99099"/>
            <exon e_start="99195" e_stop="99401"/>
            <exon e_start="99853" e_stop="99988"/>
            <exon e_start="100181" e_stop="100229"/>
            <exon e_start="100310" e_stop="100637"/>
            <exon e_start="101434" e_stop="101513"/>
            <exon e_start="101774" e_stop="101821"/>
            <exon e_start="102235" e_stop="102381"/>
            <exon e_start="102985" e_stop="103057"/>
            <exon e_start="103149" e_stop="103224"/>
            <exon e_start="103661" e_stop="103765"/>
            <exon e_start="103865" e_stop="104154"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.788" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.777" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.981" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.666" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.960" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.946" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.967" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="98958" e_stop="99099" e_length="142"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.997">
            <gDNA_intron_boundary i_start="99100" i_stop="99194" i_length="95"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="99195" e_stop="99401" e_length="207"/>
          </exon>
          <intron i_serial="2" don_prob="0.788" acc_prob="0.987">
            <gDNA_intron_boundary i_start="99402" i_stop="99852" i_length="451"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="99853" e_stop="99988" e_length="136"/>
          </exon>
          <intron i_serial="3" don_prob="0.777" acc_prob="1.000">
            <gDNA_intron_boundary i_start="99989" i_stop="100180" i_length="192"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="100181" e_stop="100229" e_length="49"/>
          </exon>
          <intron i_serial="4" don_prob="0.981" acc_prob="0.986">
            <gDNA_intron_boundary i_start="100230" i_stop="100309" i_length="80"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="100310" e_stop="100637" e_length="328"/>
          </exon>
          <intron i_serial="5" don_prob="0.666" acc_prob="0.989">
            <gDNA_intron_boundary i_start="100638" i_stop="101433" i_length="796"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="101434" e_stop="101513" e_length="80"/>
          </exon>
          <intron i_serial="6" don_prob="0.960" acc_prob="0.998">
            <gDNA_intron_boundary i_start="101514" i_stop="101773" i_length="260"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="101774" e_stop="101821" e_length="48"/>
          </exon>
          <intron i_serial="7" don_prob="0.996" acc_prob="0.971">
            <gDNA_intron_boundary i_start="101822" i_stop="102234" i_length="413"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="102235" e_stop="102381" e_length="147"/>
          </exon>
          <intron i_serial="8" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="102382" i_stop="102984" i_length="603"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="102985" e_stop="103057" e_length="73"/>
          </exon>
          <intron i_serial="9" don_prob="0.946" acc_prob="0.996">
            <gDNA_intron_boundary i_start="103058" i_stop="103148" i_length="91"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="103149" e_stop="103224" e_length="76"/>
          </exon>
          <intron i_serial="10" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="103225" i_stop="103660" i_length="436"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="103661" e_stop="103765" e_length="105"/>
          </exon>
          <intron i_serial="11" don_prob="0.967" acc_prob="0.000">
            <gDNA_intron_boundary i_start="103766" i_stop="103864" i_length="99"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="103865" e_stop="104154" e_length="290"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98958" stop="99099"/>
              <exon start="99195" stop="99401"/>
              <exon start="99853" stop="99988"/>
              <exon start="100181" stop="100229"/>
              <exon start="100310" stop="100637"/>
              <exon start="101434" stop="101513"/>
              <exon start="101774" stop="101821"/>
              <exon start="102235" stop="102381"/>
              <exon start="102985" stop="103057"/>
              <exon start="103149" stop="103224"/>
              <exon start="103661" stop="103765"/>
              <exon start="103865" stop="104152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U318127" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102261" stop="102381"/>
              <exon start="102985" stop="103057"/>
              <exon start="103149" stop="103224"/>
              <exon start="103661" stop="103765"/>
              <exon start="103865" stop="104154"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U336396" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAGGTTTAAGCAAAAGCAAAAATGGGGAAGAAACGAGAACGCCTCACAAATCCAGAACCCTTCCTTGACGATGATTCAAAATCCAAAGCTTCCTCGAAGAAACGCTCCAAAGCTCCTAAATCTCACCAGCAGCAACAACAG : GTTATATCGTCTAGTATTAGTTCGAAGATATTGAAGGAGGCGTTACTTCAGCAGAAGGAAGTAGATGAGGAGGAGACACGAGAGAGAAATCCTAATGCTATAGTGTTTTCGGAGGATGTTGCAACTAGAGCTGTTGAGGAGGATGACGATGACATTGATAATTTTAGTGGGTTTCAGGAGACTCAAAGTCAATTTGGTGATTTGGAG : GATGAGGTTGACAAGTTGCTATTGGAGGATGAGAAGCTATTGGAGGCTTTTTATTCTACACAAAATCGCCCTGAACGCACATTGGGCCAAATCCTTATTGAAAAGAGCAAGGAACAGAACGCACAAGTTTCTTCAG : TGCAACCAATGCCTAAATTGGATGAATCGATCATTGAATTATACAAAGG : TGTTGGCAAGCATCTTAGCAAATACAATTCAGGCAAGATGCCAAAAGCGTTCAAACATATTCCTTCATTGCAATATTGGGAAGATGTTCTATATTTAACAGAACCTGAGAAATGGTCACCAAATGCAATGTACCAAGCCACAAGAATATTTGCTTCAAATTTGGGTGTCAAGAAGGCAGAACGCTTCTACAAGTTGGTCTTACTCCCACGAGTTAGAGATGATATTCGCAAGAATAAGAGATTGCATTTTGCTCTGTATCAGTCCTTGAAGAAATCTCTTTATAAGCCTGCTGCCTTTAATAAGGGAATCTTGTTTCCTTTGTGTGAG : TCAAGGACATGCACCTTGAGGGAGGCTGTGATCTTTGGGAGTGTTATTGAGAAGGTCTCCATTCCGCATCTTCATGCTAG : TGTAGCGCTGCTGAAACTTGCAGAGATGGAGTATTGTGGCACAACAAG : TTATTTCATCAAGTTACTGATTGAGAAGAAATATGCTTTGCCCTATCGTGTACTTGATGCCATGGTAGCACACTTCATGAATTTCTTTGATGAAACAAGAGTCATGCCTGTGATCTGGCACCTGTCACTTCTTGTATTTGTGCAGAG : GTACAAAACTGAGATGAGGAAGGAGGATAAAGCTAACATAAGGGCACTTGTTGAAAGACAAAGACATAGATTG : ATTACACCAGATATATTGAGGGAAATCGAAAAGAGCAGAAGTCGTGGGGAAAAGGAGGATGATCCAATGTTAATTG : CAAGTCCTCTTTCTGTGATCAATAAAGCAATTGAAGAAGATAGGTTTGATATCCCCGATGTTCCTATGGAGGAGGACTAGATTTTCTCAGCAACCTCTATACGTG : ATGCAGTATGTGATGGGGATGGTATACTAGCAGATTCAGGTTTCAATATGTAATAGAGATCGAGCTGTGTGATAAGATAGATGAGCATACATGTGTGGGCTGTTGGAGTTGAGCTAGAGATTTTGCAATATATTCTTAAATGATATTTATATTTTTTGATTCCTGTCTTCATCGGCATATGCCTAAGCAGGTTTATGCAGCGACGAACCAGAAAGTTGTAACCGCCATGTTTTTTTGAAGTTTAGTGTATCAATGATACTCCCCTGAGAATACATGGGTTAAATTTTACT</gDNA_template>
            <first_frame> R  G  L  S  K  S  K  N  G  E  E  T  R  T  P  H  K  S  R  T  L  P  *  R  *  F  K  I  Q  S  F  L  E  E  T  L  Q  S  S  *  I  S  P  A  A  T  T   : G  Y  I  V  *  Y  *  F  E  D  I  E  G  G  V  T  S  A  E  G  S  R  *  G  G  D  T  R  E  K  S  *  C  Y  S  V  F  G  G  C  C  N  *  S  C  *  G  G  *  R  *  H  *  *  F  *  W  V  S  G  D  S  K  S  I  W  *  F  G   : G  *  G  *  Q  V  A  I  G  G  *  E  A  I  G  G  F  L  F  Y  T  K  S  P  *  T  H  I  G  P  N  P  Y  *  K  E  Q  G  T  E  R  T  S  F  F  S :   A  T  N  A  *  I  G  *  I  D  H  *  I  I  Q  R  :  C  W  Q  A  S  *  Q  I  Q  F  R  Q  D  A  K  S  V  Q  T  Y  S  F  I  A  I  L  G  R  C  S  I  F  N  R  T  *  E  M  V  T  K  C  N  V  P  S  H  K  N  I  C  F  K  F  G  C  Q  E  G  R  T  L  L  Q  V  G  L  T  P  T  S  *  R  *  Y  S  Q  E  *  E  I  A  F  C  S  V  S  V  L  E  E  I  S  L  *  A  C  C  L  *  *  G  N  L  V  S  F  V  *   : V  K  D  M  H  L  E  G  G  C  D  L  W  E  C  Y  *  E  G  L  H  S  A  S  S  C  *  :  C  S  A  A  E  T  C  R  D  G  V  L  W  H  N  K  :  L  F  H  Q  V  T  D  *  E  E  I  C  F  A  L  S  C  T  *  C  H  G  S  T  L  H  E  F  L  *  *  N  K  S  H  A  C  D  L  A  P  V  T  S  C  I  C  A  E  :  V  Q  N  *  D  E  E  G  G  *  S  *  H  K  G  T  C  *  K  T  K  T  *  I   : D  Y  T  R  Y  I  E  G  N  R  K  E  Q  K  S  W  G  K  G  G  *  S  N  V  N  C :   K  S  S  F  C  D  Q  *  S  N  *  R  R  *  V  *  Y  P  R  C  S  Y  G  G  G  L  D  F  L  S  N  L  Y  T  * :   C  S  M  *  W  G  W  Y  T  S  R  F  R  F  Q  Y  V  I  E  I  E  L  C  D  K  I  D  E  H  T  C  V  G  C  W  S  *  A  R  D  F  A  I  Y  S  *  M  I  F  I  F  F  D  S  C  L  H  R  H  M  P  K  Q  V  Y  A  A  T  N  Q  K  V  V  T  A  M  F  F  *  S  L  V  Y  Q  *  Y  S  P  E  N  T  W  V  K  F  Y  </first_frame>
            <second_frame>  E  V  *  A  K  A  K  M  G  K  K  R  E  R  L  T  N  P  E  P  F  L  D  D  D  S  K  S  K  A  S  S  K  K  R  S  K  A  P  K  S  H  Q  Q  Q  Q  Q  :  V  I  S  S  S  I  S  S  K  I  L  K  E  A  L  L  Q  Q  K  E  V  D  E  E  E  T  R  E  R  N  P  N  A  I  V  F  S  E  D  V  A  T  R  A  V  E  E  D  D  D  D  I  D  N  F  S  G  F  Q  E  T  Q  S  Q  F  G  D  L  E  :  D  E  V  D  K  L  L  L  E  D  E  K  L  L  E  A  F  Y  S  T  Q  N  R  P  E  R  T  L  G  Q  I  L  I  E  K  S  K  E  Q  N  A  Q  V  S  S   : V  Q  P  M  P  K  L  D  E  S  I  I  E  L  Y  K  G :   V  G  K  H  L  S  K  Y  N  S  G  K  M  P  K  A  F  K  H  I  P  S  L  Q  Y  W  E  D  V  L  Y  L  T  E  P  E  K  W  S  P  N  A  M  Y  Q  A  T  R  I  F  A  S  N  L  G  V  K  K  A  E  R  F  Y  K  L  V  L  L  P  R  V  R  D  D  I  R  K  N  K  R  L  H  F  A  L  Y  Q  S  L  K  K  S  L  Y  K  P  A  A  F  N  K  G  I  L  F  P  L  C  E  :  S  R  T  C  T  L  R  E  A  V  I  F  G  S  V  I  E  K  V  S  I  P  H  L  H  A  S :   V  A  L  L  K  L  A  E  M  E  Y  C  G  T  T  S :   Y  F  I  K  L  L  I  E  K  K  Y  A  L  P  Y  R  V  L  D  A  M  V  A  H  F  M  N  F  F  D  E  T  R  V  M  P  V  I  W  H  L  S  L  L  V  F  V  Q  R :   Y  K  T  E  M  R  K  E  D  K  A  N  I  R  A  L  V  E  R  Q  R  H  R  L  :  I  T  P  D  I  L  R  E  I  E  K  S  R  S  R  G  E  K  E  D  D  P  M  L  I   : A  S  P  L  S  V  I  N  K  A  I  E  E  D  R  F  D  I  P  D  V  P  M  E  E  D  *  I  F  S  A  T  S  I  R   : D  A  V  C  D  G  D  G  I  L  A  D  S  G  F  N  M  *  *  R  S  S  C  V  I  R  *  M  S  I  H  V  W  A  V  G  V  E  L  E  I  L  Q  Y  I  L  K  *  Y  L  Y  F  L  I  P  V  F  I  G  I  C  L  S  R  F  M  Q  R  R  T  R  K  L  *  P  P  C  F  F  E  V  *  C  I  N  D  T  P  L  R  I  H  G  L  N  F  T </second_frame>
            <third_frame>   R  F  K  Q  K  Q  K  W  G  R  N  E  N  A  S  Q  I  Q  N  P  S  L  T  M  I  Q  N  P  K  L  P  R  R  N  A  P  K  L  L  N  L  T  S  S  N  N  R :   L  Y  R  L  V  L  V  R  R  Y  *  R  R  R  Y  F  S  R  R  K  *  M  R  R  R  H  E  R  E  I  L  M  L  *  C  F  R  R  M  L  Q  L  E  L  L  R  R  M  T  M  T  L  I  I  L  V  G  F  R  R  L  K  V  N  L  V  I  W  R :   M  R  L  T  S  C  Y  W  R  M  R  S  Y  W  R  L  F  I  L  H  K  I  A  L  N  A  H  W  A  K  S  L  L  K  R  A  R  N  R  T  H  K  F  L  Q  :  C  N  Q  C  L  N  W  M  N  R  S  L  N  Y  T  K   : V  L  A  S  I  L  A  N  T  I  Q  A  R  C  Q  K  R  S  N  I  F  L  H  C  N  I  G  K  M  F  Y  I  *  Q  N  L  R  N  G  H  Q  M  Q  C  T  K  P  Q  E  Y  L  L  Q  I  W  V  S  R  R  Q  N  A  S  T  S  W  S  Y  S  H  E  L  E  M  I  F  A  R  I  R  D  C  I  L  L  C  I  S  P  *  R  N  L  F  I  S  L  L  P  L  I  R  E  S  C  F  L  C  V  S :   Q  G  H  A  P  *  G  R  L  *  S  L  G  V  L  L  R  R  S  P  F  R  I  F  M  L   : V  *  R  C  *  N  L  Q  R  W  S  I  V  A  Q  Q   : V  I  S  S  S  Y  *  L  R  R  N  M  L  C  P  I  V  Y  L  M  P  W  *  H  T  S  *  I  S  L  M  K  Q  E  S  C  L  *  S  G  T  C  H  F  L  Y  L  C  R   : G  T  K  L  R  *  G  R  R  I  K  L  T  *  G  H  L  L  K  D  K  D  I  D  * :   L  H  Q  I  Y  *  G  K  S  K  R  A  E  V  V  G  K  R  R  M  I  Q  C  *  L  :  Q  V  L  F  L  *  S  I  K  Q  L  K  K  I  G  L  I  S  P  M  F  L  W  R  R  T  R  F  S  Q  Q  P  L  Y  V  :  M  Q  Y  V  M  G  M  V  Y  *  Q  I  Q  V  S  I  C  N  R  D  R  A  V  *  *  D  R  *  A  Y  M  C  G  L  L  E  L  S  *  R  F  C  N  I  F  L  N  D  I  Y  I  F  *  F  L  S  S  S  A  Y  A  *  A  G  L  C  S  D  E  P  E  S  C  N  R  H  V  F  L  K  F  S  V  S  M  I  L  P  *  E  Y  M  G  *  I  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0220H02.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="98968" stop="99099"/>
                    <exon start="99195" stop="99401"/>
                    <exon start="99853" stop="99988"/>
                    <exon start="100181" stop="100229"/>
                    <exon start="100310" stop="100637"/>
                    <exon start="101434" stop="101513"/>
                    <exon start="101774" stop="101821"/>
                    <exon start="102235" stop="102381"/>
                    <exon start="102985" stop="103057"/>
                    <exon start="103149" stop="103224"/>
                    <exon start="103661" stop="103740"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1353</number_coding_nucleotides>
                  <number_encoded_amino_acids>451</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AKAKMGKKRERLTNPEPFLDDDSKSKASSKKRSKAPKSHQQQQQVISSSISSKILKEALLQQKEVDEEETRERNPNAIVFSEDVATRAVEEDDDDIDNFSGFQETQSQFGDLEDEVDKLLLEDEKLLEAFYSTQNRPERTLGQILIEKSKEQNAQVSSVQPMPKLDESIIELYKGVGKHLSKYNSGKMPKAFKHIPSLQYWEDVLYLTEPEKWSPNAMYQATRIFASNLGVKKAERFYKLVLLPRVRDDIRKNKRLHFALYQSLKKSLYKPAAFNKGILFPLCESRTCTLREAVIFGSVIEKVSIPHLHASVALLKLAEMEYCGTTSYFIKLLIEKKYALPYRVLDAMVAHFMNFFDETRVMPVIWHLSLLVFVQRYKTEMRKEDKANIRALVERQRHRLITPDILREIEKSRSRGEKEDDPMLIASPLSVINKAIEEDRFDIPDVPMEED*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="103022" e_stop="103057"/>
            <exon e_start="103149" e_stop="103646"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.946" acc_prob="0.996" e_score="0.861"/>
          <exon-only e_score="0.972"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.861">
            <gDNA_exon_boundary e_start="103022" e_stop="103057" e_length="36"/>
          </exon>
          <intron i_serial="1" don_prob="0.946" acc_prob="0.996">
            <gDNA_intron_boundary i_start="103058" i_stop="103148" i_length="91"/>
          </intron>
          <exon e_serial="2" e_score="0.972">
            <gDNA_exon_boundary e_start="103149" e_stop="103646" e_length="498"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103022" stop="103057"/>
              <exon start="103149" stop="103646"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U336397" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATAAGGGCACTTGTTGAAAGACAAAGACATAGATTG : ATTACACCAGATATATTGAGGGAAATCGAAAAGAGCAGAAGTCGTGGGGAAAAGGAGGATGATCCAATGTTAATTGATATCCTCTCATTGATGGTTTAAATCTTTCTGTTACATATCTGCTTGAGCTTAATTTGGTCTGTTTATACTGTGTCGCCTGCTCTTGCCATAACATAGTCGGGTTCTTAATGTTTTAAAAACTGTTGATGAAATAAAAAATCTTTAAACCTTTCGTGCCAGTTCATGCTTAAATTCTGCTATTTCCTGTGAGTGCGTGCATATCTGCATCGATGGAATAGGTTGTCATGCACAACAACAATCTTCTGTTTGTAAGTTTTGTGTATTGTTGAAGTTTGTTGCTTTTTGCAAGATGGATAATTTTTAAATTGTTTATTTCCTGTTGTTCTGTAACGACTGAAGTAAAATAGTAGATGTAGCTATGATTTATTCATGTTGCTATTAATATTTTTTCTGCTGCATCATTGGAAAATATATTTTCTT</gDNA_template>
            <first_frame> I  R  A  L  V  E  R  Q  R  H  R  L  :  I  T  P  D  I  L  R  E  I  E  K  S  R  S  R  G  E  K  E  D  D  P  M  L  I  D  I  L  S  L  M  V  *  I  F  L  L  H  I  C  L  S  L  I  W  S  V  Y  T  V  S  P  A  L  A  I  T  *  S  G  S  *  C  F  K  N  C  *  *  N  K  K  S  L  N  L  S  C  Q  F  M  L  K  F  C  Y  F  L  *  V  R  A  Y  L  H  R  W  N  R  L  S  C  T  T  T  I  F  C  L  *  V  L  C  I  V  E  V  C  C  F  L  Q  D  G  *  F  L  N  C  L  F  P  V  V  L  *  R  L  K  *  N  S  R  C  S  Y  D  L  F  M  L  L  L  I  F  F  L  L  H  H  W  K  I  Y  F  L </first_frame>
            <second_frame>  *  G  H  L  L  K  D  K  D  I  D  * :   L  H  Q  I  Y  *  G  K  S  K  R  A  E  V  V  G  K  R  R  M  I  Q  C  *  L  I  S  S  H  *  W  F  K  S  F  C  Y  I  S  A  *  A  *  F  G  L  F  I  L  C  R  L  L  L  P  *  H  S  R  V  L  N  V  L  K  T  V  D  E  I  K  N  L  *  T  F  R  A  S  S  C  L  N  S  A  I  S  C  E  C  V  H  I  C  I  D  G  I  G  C  H  A  Q  Q  Q  S  S  V  C  K  F  C  V  L  L  K  F  V  A  F  C  K  M  D  N  F  *  I  V  Y  F  L  L  F  C  N  D  *  S  K  I  V  D  V  A  M  I  Y  S  C  C  Y  *  Y  F  F  C  C  I  I  G  K  Y  I  F   </second_frame>
            <third_frame>   K  G  T  C  *  K  T  K  T  *  I   : D  Y  T  R  Y  I  E  G  N  R  K  E  Q  K  S  W  G  K  G  G  *  S  N  V  N  *  Y  P  L  I  D  G  L  N  L  S  V  T  Y  L  L  E  L  N  L  V  C  L  Y  C  V  A  C  S  C  H  N  I  V  G  F  L  M  F  *  K  L  L  M  K  *  K  I  F  K  P  F  V  P  V  H  A  *  I  L  L  F  P  V  S  A  C  I  S  A  S  M  E  *  V  V  M  H  N  N  N  L  L  F  V  S  F  V  Y  C  *  S  L  L  L  F  A  R  W  I  I  F  K  L  F  I  S  C  C  S  V  T  T  E  V  K  *  *  M  *  L  *  F  I  H  V  A  I  N  I  F  S  A  A  S  L  E  N  I  F  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0220H02.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="126025" PGL_stop="123827"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="126025" e_stop="123827"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="126025" e_stop="123827" e_length="2199"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126025" stop="123827"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U315869" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAAAAAAAAAATCCCCTTTCCACAACACCAAATTGTACTATTAACATCCAAAAAAAAGAAAAAGAAAATAGGTAGCTATGGCAACTACTACTTCACATGCCACAAATACATGGATTAAGACTAAGTTGTCAATGCCATCATCAAAGGAGTTTGGTTTTGCATCAAACTCTATTTCTCTACTCAAAAATCAACATAATAGGCAAAGTCTCAACATTAATTCCTCTCTTCAAGCTCCACCTATACTTCATTTTCCTAAACAATCTTCAAATTATCAAACACCAAAGAATAATACAATTTCACACCCAAAACAAGAAAACAACAACTCCTCTTCTTCTTCAACTTCCAAGTGGAATTTAGTGCAGAAAGCAGCAGCAATGGCTTTAGATGCTGTAGAAAGTGCTTTAACTAAACATGAACTTGAACACCCTTTGCCGAAAACAGCCGACCCACGAGTCCAGATTTCTGGGAATTTTGCTCCGGTACCGGAAAATCCAGTCTGTCAATCTCTTCCGGTCACCGGAAAAATACCCAAATGTGTTCAAGGCGTTTACGTTCGAAACGGAGCTAACCCTCTTTTTGAACCAACCGCCGGACACCATTTCTTCGACGGCGACGGTATGGTTCACGCCGTTCAATTCAAAAATGGGTCGGCTAGTTACGCTTGCCGTTTCACTGAAACAGAGAGGCTTGTTCAAGAAAAAGCTTTGGGTCGCCCTGTTTTCCCTAAAGCCATTGGTGAATTACATGGTCACTCTGGAATTGCAAGGCTTATGCTGTTTTACGCTCGTGGGCTCTTCGGACTTGTTGATCACAGTAAAGGAACTGGTGTTGCAAACGCCGGTTTAGTCTATTTCAATAACCGATTACTTGCTATGTCTGAAGATGATTTGCCTTACCATGTAAAGGTAACACCCACCGGCGATCTTAAAACAGAGGGTCGATTCGATTTCGACGGCCAGCTAAAATCCACCATGATAGCTCACCCAAAGCTCGACCCAGTTTCCGGTGAGCTATTTGCTCTTAGCTACGATGTGATTCAGAAGCCATACCTCAAGTACTTCAGATTTTCAAAAAATGGGGAAAAATCAAATGATGTTGAAATTCCAGTTGAAGACCCAACAATGATGCATGATTTCGCAATTACTGAGAACTTCGTCGTCATTCCTGATCAACAAGTCGTTTTCAAGATGTCTGAAATGATCCGTGGAGGTTCACCGGTGGTTTACGACAAGAACAAAGTTTCCCGATTTGGTATTCTGGATAAGTACGCGAAAGATGGGTCTGATTTGAAATGGGTTGAAGTACCTGATTGTTTCTGTTTCCACCTCTGGAATGCTTGGGAAGAAGCAGAAACAGATGAAATCGTTGTAATTGGTTCATGTATGACACCACCAGACTCCATTTTCAATGAATGTGATGAAGGGCTAAAGAGTGTTTTATCCGAAATCCGTCTCAATTTGAAAACAGGGAAATCAACAAGAAAATCCATAATCGAAAACCCGGATGAACAAGTGAATTTAGAAGCTGGAATGGTGAACCGAAACAAACTCGGAAGGAAAACAGAGTATGCTTATTTGGCTATCGCTGAACCATGGCCAAAAGTTTCTGGTTTTGCAAAAGTAAACCTGTTCACCGGTGAAGTTGAGAAATTCATTTATGGTGACAACAAATATGGTGGGGAACCTCTTTTTTTACCAAGAGACCCCAACAGCAAGGAAGAAGACGATGGTTATATTTTAGCTTTCGTTCACGATGAGAAAGAATGGAAATCAGAACTGCAAATTGTTAACGCAATGAGTTTGAAGTTGGAGGCAACTGTGAAGCTTCCATCAAGAGTTCCTTATGGATTTCATGGAACATTCATAAACGCCAATGATTTGGCAAATCAGGCATGATTGTGACTATTACTGAGGAAAATTTACCAGAGGGATGGTTTAGAATATACGTCCCCGGAATATTCCTCTTTAATGGAGTTCGTTTCTTTGATTATTTCTACATCTTTTTTCTTTGTTTATATAGTGTGAGAGATTCTCAGAGAACCAGTTAGTAGCTTGGATGTAGTTAGAAAATGGGAGCTCAGCTGGTTTTTTTCTGGTGATTCTTTCACATTTGATTGTGCATGAGAGAGTATATATACCTTATTATAGGAATACAATACAATGTTCCTGTAACTCTCTGTTTTCTTGTATATCAAAAAA</gDNA_template>
            <first_frame> K  K  K  K  S  P  F  H  N  T  K  L  Y  Y  *  H  P  K  K  R  K  R  K  *  V  A  M  A  T  T  T  S  H  A  T  N  T  W  I  K  T  K  L  S  M  P  S  S  K  E  F  G  F  A  S  N  S  I  S  L  L  K  N  Q  H  N  R  Q  S  L  N  I  N  S  S  L  Q  A  P  P  I  L  H  F  P  K  Q  S  S  N  Y  Q  T  P  K  N  N  T  I  S  H  P  K  Q  E  N  N  N  S  S  S  S  S  T  S  K  W  N  L  V  Q  K  A  A  A  M  A  L  D  A  V  E  S  A  L  T  K  H  E  L  E  H  P  L  P  K  T  A  D  P  R  V  Q  I  S  G  N  F  A  P  V  P  E  N  P  V  C  Q  S  L  P  V  T  G  K  I  P  K  C  V  Q  G  V  Y  V  R  N  G  A  N  P  L  F  E  P  T  A  G  H  H  F  F  D  G  D  G  M  V  H  A  V  Q  F  K  N  G  S  A  S  Y  A  C  R  F  T  E  T  E  R  L  V  Q  E  K  A  L  G  R  P  V  F  P  K  A  I  G  E  L  H  G  H  S  G  I  A  R  L  M  L  F  Y  A  R  G  L  F  G  L  V  D  H  S  K  G  T  G  V  A  N  A  G  L  V  Y  F  N  N  R  L  L  A  M  S  E  D  D  L  P  Y  H  V  K  V  T  P  T  G  D  L  K  T  E  G  R  F  D  F  D  G  Q  L  K  S  T  M  I  A  H  P  K  L  D  P  V  S  G  E  L  F  A  L  S  Y  D  V  I  Q  K  P  Y  L  K  Y  F  R  F  S  K  N  G  E  K  S  N  D  V  E  I  P  V  E  D  P  T  M  M  H  D  F  A  I  T  E  N  F  V  V  I  P  D  Q  Q  V  V  F  K  M  S  E  M  I  R  G  G  S  P  V  V  Y  D  K  N  K  V  S  R  F  G  I  L  D  K  Y  A  K  D  G  S  D  L  K  W  V  E  V  P  D  C  F  C  F  H  L  W  N  A  W  E  E  A  E  T  D  E  I  V  V  I  G  S  C  M  T  P  P  D  S  I  F  N  E  C  D  E  G  L  K  S  V  L  S  E  I  R  L  N  L  K  T  G  K  S  T  R  K  S  I  I  E  N  P  D  E  Q  V  N  L  E  A  G  M  V  N  R  N  K  L  G  R  K  T  E  Y  A  Y  L  A  I  A  E  P  W  P  K  V  S  G  F  A  K  V  N  L  F  T  G  E  V  E  K  F  I  Y  G  D  N  K  Y  G  G  E  P  L  F  L  P  R  D  P  N  S  K  E  E  D  D  G  Y  I  L  A  F  V  H  D  E  K  E  W  K  S  E  L  Q  I  V  N  A  M  S  L  K  L  E  A  T  V  K  L  P  S  R  V  P  Y  G  F  H  G  T  F  I  N  A  N  D  L  A  N  Q  A  *  L  *  L  L  L  R  K  I  Y  Q  R  D  G  L  E  Y  T  S  P  E  Y  S  S  L  M  E  F  V  S  L  I  I  S  T  S  F  F  F  V  Y  I  V  *  E  I  L  R  E  P  V  S  S  L  D  V  V  R  K  W  E  L  S  W  F  F  S  G  D  S  F  T  F  D  C  A  *  E  S  I  Y  T  L  L  *  E  Y  N  T  M  F  L  *  L  S  V  F  L  Y  I  K  K </first_frame>
            <second_frame>  K  K  K  N  P  L  S  T  T  P  N  C  T  I  N  I  Q  K  K  E  K  E  N  R  *  L  W  Q  L  L  L  H  M  P  Q  I  H  G  L  R  L  S  C  Q  C  H  H  Q  R  S  L  V  L  H  Q  T  L  F  L  Y  S  K  I  N  I  I  G  K  V  S  T  L  I  P  L  F  K  L  H  L  Y  F  I  F  L  N  N  L  Q  I  I  K  H  Q  R  I  I  Q  F  H  T  Q  N  K  K  T  T  T  P  L  L  L  Q  L  P  S  G  I  *  C  R  K  Q  Q  Q  W  L  *  M  L  *  K  V  L  *  L  N  M  N  L  N  T  L  C  R  K  Q  P  T  H  E  S  R  F  L  G  I  L  L  R  Y  R  K  I  Q  S  V  N  L  F  R  S  P  E  K  Y  P  N  V  F  K  A  F  T  F  E  T  E  L  T  L  F  L  N  Q  P  P  D  T  I  S  S  T  A  T  V  W  F  T  P  F  N  S  K  M  G  R  L  V  T  L  A  V  S  L  K  Q  R  G  L  F  K  K  K  L  W  V  A  L  F  S  L  K  P  L  V  N  Y  M  V  T  L  E  L  Q  G  L  C  C  F  T  L  V  G  S  S  D  L  L  I  T  V  K  E  L  V  L  Q  T  P  V  *  S  I  S  I  T  D  Y  L  L  C  L  K  M  I  C  L  T  M  *  R  *  H  P  P  A  I  L  K  Q  R  V  D  S  I  S  T  A  S  *  N  P  P  *  *  L  T  Q  S  S  T  Q  F  P  V  S  Y  L  L  L  A  T  M  *  F  R  S  H  T  S  S  T  S  D  F  Q  K  M  G  K  N  Q  M  M  L  K  F  Q  L  K  T  Q  Q  *  C  M  I  S  Q  L  L  R  T  S  S  S  F  L  I  N  K  S  F  S  R  C  L  K  *  S  V  E  V  H  R  W  F  T  T  R  T  K  F  P  D  L  V  F  W  I  S  T  R  K  M  G  L  I  *  N  G  L  K  Y  L  I  V  S  V  S  T  S  G  M  L  G  K  K  Q  K  Q  M  K  S  L  *  L  V  H  V  *  H  H  Q  T  P  F  S  M  N  V  M  K  G  *  R  V  F  Y  P  K  S  V  S  I  *  K  Q  G  N  Q  Q  E  N  P  *  S  K  T  R  M  N  K  *  I  *  K  L  E  W  *  T  E  T  N  S  E  G  K  Q  S  M  L  I  W  L  S  L  N  H  G  Q  K  F  L  V  L  Q  K  *  T  C  S  P  V  K  L  R  N  S  F  M  V  T  T  N  M  V  G  N  L  F  F  Y  Q  E  T  P  T  A  R  K  K  T  M  V  I  F  *  L  S  F  T  M  R  K  N  G  N  Q  N  C  K  L  L  T  Q  *  V  *  S  W  R  Q  L  *  S  F  H  Q  E  F  L  M  D  F  M  E  H  S  *  T  P  M  I  W  Q  I  R  H  D  C  D  Y  Y  *  G  K  F  T  R  G  M  V  *  N  I  R  P  R  N  I  P  L  *  W  S  S  F  L  *  L  F  L  H  L  F  S  L  F  I  *  C  E  R  F  S  E  N  Q  L  V  A  W  M  *  L  E  N  G  S  S  A  G  F  F  L  V  I  L  S  H  L  I  V  H  E  R  V  Y  I  P  Y  Y  R  N  T  I  Q  C  S  C  N  S  L  F  S  C  I  S  K   </second_frame>
            <third_frame>   K  K  K  I  P  F  P  Q  H  Q  I  V  L  L  T  S  K  K  K  K  K  K  I  G  S  Y  G  N  Y  Y  F  T  C  H  K  Y  M  D  *  D  *  V  V  N  A  I  I  K  G  V  W  F  C  I  K  L  Y  F  S  T  Q  K  S  T  *  *  A  K  S  Q  H  *  F  L  S  S  S  S  T  Y  T  S  F  S  *  T  I  F  K  L  S  N  T  K  E  *  Y  N  F  T  P  K  T  R  K  Q  Q  L  L  F  F  F  N  F  Q  V  E  F  S  A  E  S  S  S  N  G  F  R  C  C  R  K  C  F  N  *  T  *  T  *  T  P  F  A  E  N  S  R  P  T  S  P  D  F  W  E  F  C  S  G  T  G  K  S  S  L  S  I  S  S  G  H  R  K  N  T  Q  M  C  S  R  R  L  R  S  K  R  S  *  P  S  F  *  T  N  R  R  T  P  F  L  R  R  R  R  Y  G  S  R  R  S  I  Q  K  W  V  G  *  L  R  L  P  F  H  *  N  R  E  A  C  S  R  K  S  F  G  S  P  C  F  P  *  S  H  W  *  I  T  W  S  L  W  N  C  K  A  Y  A  V  L  R  S  W  A  L  R  T  C  *  S  Q  *  R  N  W  C  C  K  R  R  F  S  L  F  Q  *  P  I  T  C  Y  V  *  R  *  F  A  L  P  C  K  G  N  T  H  R  R  S  *  N  R  G  S  I  R  F  R  R  P  A  K  I  H  H  D  S  S  P  K  A  R  P  S  F  R  *  A  I  C  S  *  L  R  C  D  S  E  A  I  P  Q  V  L  Q  I  F  K  K  W  G  K  I  K  *  C  *  N  S  S  *  R  P  N  N  D  A  *  F  R  N  Y  *  E  L  R  R  H  S  *  S  T  S  R  F  Q  D  V  *  N  D  P  W  R  F  T  G  G  L  R  Q  E  Q  S  F  P  I  W  Y  S  G  *  V  R  E  R  W  V  *  F  E  M  G  *  S  T  *  L  F  L  F  P  P  L  E  C  L  G  R  S  R  N  R  *  N  R  C  N  W  F  M  Y  D  T  T  R  L  H  F  Q  *  M  *  *  R  A  K  E  C  F  I  R  N  P  S  Q  F  E  N  R  E  I  N  K  K  I  H  N  R  K  P  G  *  T  S  E  F  R  S  W  N  G  E  P  K  Q  T  R  K  E  N  R  V  C  L  F  G  Y  R  *  T  M  A  K  S  F  W  F  C  K  S  K  P  V  H  R  *  S  *  E  I  H  L  W  *  Q  Q  I  W  W  G  T  S  F  F  T  K  R  P  Q  Q  Q  G  R  R  R  W  L  Y  F  S  F  R  S  R  *  E  R  M  E  I  R  T  A  N  C  *  R  N  E  F  E  V  G  G  N  C  E  A  S  I  K  S  S  L  W  I  S  W  N  I  H  K  R  Q  *  F  G  K  S  G  M  I  V  T  I  T  E  E  N  L  P  E  G  W  F  R  I  Y  V  P  G  I  F  L  F  N  G  V  R  F  F  D  Y  F  Y  I  F  F  L  C  L  Y  S  V  R  D  S  Q  R  T  S  *  *  L  G  C  S  *  K  M  G  A  Q  L  V  F  F  W  *  F  F  H  I  *  L  C  M  R  E  Y  I  Y  L  I  I  G  I  Q  Y  N  V  P  V  T  L  C  F  L  V  Y  Q  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0220H02.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125953" stop="124130"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1821</number_coding_nucleotides>
                  <number_encoded_amino_acids>607</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VAMATTTSHATNTWIKTKLSMPSSKEFGFASNSISLLKNQHNRQSLNINSSLQAPPILHFPKQSSNYQTPKNNTISHPKQENNNSSSSSTSKWNLVQKAAAMALDAVESALTKHELEHPLPKTADPRVQISGNFAPVPENPVCQSLPVTGKIPKCVQGVYVRNGANPLFEPTAGHHFFDGDGMVHAVQFKNGSASYACRFTETERLVQEKALGRPVFPKAIGELHGHSGIARLMLFYARGLFGLVDHSKGTGVANAGLVYFNNRLLAMSEDDLPYHVKVTPTGDLKTEGRFDFDGQLKSTMIAHPKLDPVSGELFALSYDVIQKPYLKYFRFSKNGEKSNDVEIPVEDPTMMHDFAITENFVVIPDQQVVFKMSEMIRGGSPVVYDKNKVSRFGILDKYAKDGSDLKWVEVPDCFCFHLWNAWEEAETDEIVVIGSCMTPPDSIFNECDEGLKSVLSEIRLNLKTGKSTRKSIIENPDEQVNLEAGMVNRNKLGRKTEYAYLAIAEPWPKVSGFAKVNLFTGEVEKFIYGDNKYGGEPLFLPRDPNSKEEDDGYILAFVHDEKEWKSELQIVNAMSLKLEATVKLPSRVPYGFHGTFINANDLANQA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 32 chains have been computed
$ 
$ memory statistics:
$ 100416 bytes spliced alignments in total
$ 16 spliced alignments have been stored
$ 6276 bytes was the average size of a spliced alignment
$ 21032 bytes predicted gene locations in total
$ 13 predicted gene locations have been stored
$ 1617 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 36 backtrace matrices have been allocated
$ 
$ date finished: 2008-02-20 09:13:08
-->
