<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2008-04-17 23:55:43"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E543311" ref_strand="+" ref_description="SGN-E543311 [TUS-65-B1]">
      <seq>tttttttttttttttttttttttttttttttttttttttttttttttttaggatttaagcatcctctgatcactaaaaaaatccccttgggttgttcttccaagtacactctcatgtcttacaaactcaccgtacatgtcaagggtcaagcctttttcgtaccccaacccctcaaagaatctagtctctaacaaatggtgggacaaaccaaactataaattcccaaaataatggataactcatctactcctaaaatatggggcaaactgctgtctgatcagcaatccccatgtatcaaagctgaatccaacttgtcaagctccaattgccaaaatcatccaagacattattcaattcaattcatgttgcactagtgttgaaaagatcaatgttgaagcactggttccttgccggtcttgcaatattaaagttgagcaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="10634" stop="14805"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10933" g_stop="10979" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="47" r_length="47" r_score="0.872"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10980" i_stop="14112" i_length="3133">
            <donor d_prob="0.000" d_score="0.87"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14113" g_stop="14505" g_length="393"/>
          <reference_exon_boundary r_type="cDNA" r_start="48" r_stop="440" r_length="393" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-E543311" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>440</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E543311" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10933" e_stop="10979"/>
          <exon e_start="14113" e_stop="14505"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTTTTTTTTTTTTTTTTTAAAATTTTTTTTTTTTTTTTCTTTTTATGGGTTTTTTTTTATTTTTTTTTTAAAAAAAAAAGGTTTTTTTTATTTGGGTTTTGCAAACCCAACATTTGGGAATTGCTTCCCTTTAGGTTCTTTTTGGGGGTAGTATTTTCCAGTAAAATTTTTTTGGTATTTAGACCCGGAAATTTTTGATTTATGGGTGAAAAAATTTTTAGTGGTGTACCCCCAATTCAATTTTGGTGTAGTTTGTGGTAGTTAAGGTATTGAGTTGTACGAAGGGCATTAAACATATTATGGCATAAAGAAAATTAAAATATTTTAAACAATTAATGTTTTGACAAATAAAAAGAAAAAACACGTTTAGAAGAATCTTTTGGTTCCTATGTATTAAGTATGAATTTTTGTTTTTAAATTTTAGGGATGGTAATGGAGCGGAGCGGGTTTAAGGTTGTACAGGACCGGTAGAATGCAGGGCGAGTTGAAATGGGTTTGTTTTAAAATTAGTACCGGATGGAGCGGGTTGCGGGTATATGTAATTTTTTGTAGGTTCAAATTTATTGTAACTTTATATATTTTATAAGAGTGATAGAACGAACATTATTTATTAAGATAATTTCTATAAAACTACTAAAATATTCAAGATAGTAAATGAAAATGGTTCAATAAAAAATAATCAATTTCTTACTTGTTTCCAAATTGATCTCTACAAAATAATTTTTTAAGTCACTATCCTATTAAATTAATATAACTTTAGAAATTCTTCTAGACTTTCTCTTTTGCTCTGTATCGACTCTTCTAGCTTTTTTTTCACTTGCAACAATGACTTGTCCCATGAATCTTACCAAAAATCTGAAGTAATAGAAAGAGATGTGCCTCTTAAATAACTTGAAATTGATGCAATGTATGATAACGTAGATCCAACTTTTTTTCCACATTAGCTTTACAAGTCAAAGGTGCATCCTTCTTCGACTTTGACTTCTCTAAACTCAGAAACTTCATGAATAGAGATTTTGGCTTCATTGTTTAGATCATTTCAACAAATCCTTCGTCGTCAAAATAAAAAATACGACCCACATTATTCTTTTTTTGAAAATAATTGGATAATTTCAATACTAAAAAAATGAAACATCATCAGAAGAAAATACCTCTTCAAACTTTAAATCAATTGATTGGAAAGAGAAGATTAATTGAAATAAAAAATTGAAAGATGGATGTAAGTGGTGATGAAAAGGGGGAGAAAATGGTGGAGTCTTATGTATCAATTAAGAGAATGAGATTTTGTAATTTTTGAAATCGTAAGAAAATAGCGTAAAAAAGAATGCATATTAGGTAACTTTTCCTTAAAAAAATACATCTAATCTACGTATATATTCTACCATGAAATTTTAAAAAGATTTGGCAGCTAAAAGGGAGGAAGAAAGAATCAAAATAGGAAATTAATACAATTAGGAGATTAATAATAACTAAAACAGTGACCAACTAATAAGGAGAAAATCAAGAATTAATAATTACCCATTACTAAACACTACATTTAAAGGGAAAAATATTGTAAATTAATTAGTTAGGAGTTATTTTAATTCAGTTCTTTTGTCCCTCACCCTGGAGAGTAGTGAGACATTTTTATCCTAGGAGGAGGCTTTGTTAACCGACTTCTCATAAATGATATTAGGATCGATCGACTCATTATAGGAAAGAAATAATAGACTCTGTTATTGATACACAAGTACAAATTGAACACAATATTCAAGTTATACTTGTGGGACGGAACTATTCGATTTATTATTATTAATACATTAGTATATTTGTTTTTTTTTATTTAGAAAAGACATAAAGTCACCATTGAAGTTGTCCTGAATTCTCATAAAGAGACACTTAAACTTTGCGACTGTCCTATTACCCCACTAAACAATTATGAACAAATATTATTATACTATTTTTCGATCAGCCCCAAATTTTAAGAAGCTAGTGAGTTCACGCACTAATCATTACATAACACGTGCTAATTTAATTAAAAATGTAATATTTTTTTTCAATTTAAGTTTATCCTTTATCTTTTTCTTTCTTTGTTTCTCTCTCTTACTTTTGATATATCTTAAATTTCATTTTATCTTCTACCTCCAACTTTCAAGTGATTCATCCCTCCATTTTTTTTTTCTTAACCTCCACCCCCTGTCAAATTGAACTTCACTTCCATTTTTTTCTTTTCATTTTCTTATTTTTCTCGGGTCAAATTCTTTATAGAATTCATACTATTATTTAGACTTTATTGAACAATTGATAACAAAATTAATTATTTTTCTAAGAAAATTTAAAATTTTGAAGGTATCATCAACTAATCATTTTCATATAAATTCAAAATTAGAAATGATAATTTTATAAGAATCAATTAATTTACCAAAAATTGAAAGAACTTATTTTAAATCGGATAAAAAAAACTATATGATACTTCCTAATCATCTTGAAATCTAATGAGCTTATCAAATTGTTCGAAATGTAAAAAAATATTTAGATAAAGTTTTAAATTTAAAGAGAGTAAAACTAAAAAAAAAAGAAGAAAAAAGGTGAAGTTATAGTAGAAATAATGACATTGAAATTAAGAAGCTTCAATGGAAGGAAATGTCAATGAACTCATGAAAAGAAAGAAGAAAGAAAGAGAAAAAATAAAAAGGAAAAAAAGTTAAAATAACAAGAAAAATAAGAAAATATATTGTATAATAAAATACTTGTAAAAATAAAATTATATTAGTTATTTTAGACTGTTCACTCTCTTTGAGAGAGTGAACATCACTCTCTATGTCAGGTGGACGCGAAAAAGATATAATAATATCTATTCAAAATTGTTTAGTGGAATAATAGAAAAGTTGCAAAATTAAGGTGTTTTTATTGAAAATTCAAAACAACTTTTTATGTCTTTATATATAGGTATATATATATTTAACATATATGTTACATCCGGTAAGTTTTTGGGTTAGAAACTGAAACATAAACAATAATGTCATAACTAGGGAGTAATGAGTAGTCTTATATATGGATTTTTCTGTTTTCTCCTCTTTCTAAGCTTTAAAGACTATGTTATAGTAGCTTTAGCCTGCAAGGTTTTGAAAAATTAACAAGATAAAATAGAAAAATTTAGGTGGTCGTGATTTTTATAAATAAAAGGATAAAAATGAATTAGGATTTAAGCATCATCTGATCACTAGAAAAATCCCCTTGTGTTGTTCTTCCAAGTACACTCTCATGTCTTACAAACTCACCGTACATGTCAAGGGTCAAGCCTCTTCCGTACCCCAACCCCTCAAAGAATCTAGTCTCTAACAAATGGTAGGACAAACCAAACTATAAATTCCAAAAATAATGTATAACTCATCTACTCCTAAAATATGGTGCAAACTGCTGTCTGATCAGCAATCCCCATGTATCAAAGCTGAATCCAACTTGTCAAGCTCCAATTGCCAAAATCATCCAAGACATTATTCAATTCAATTCATGTTGCACTAGTGTTGAAGAGATCAATGTTGAAGCACTGGTTCCTTGCCGGTCTTGCAATATTAAAGTTGAGCAAAA</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGGATTTAAGCATCCTCTGATCACTAAAAAAATCCCCTTGGGTTGTTCTTCCAAGTACACTCTCATGTCTTACAAACTCACCGTACATGTCAAGGGTCAAGCCTTTTTCGTACCCCAACCCCTCAAAGAATCTAGTCTCTAACAAATGGTGGGACAAACCAAACTATAAATTCCCAAAATAATGGATAACTCATCTACTCCTAAAATATGGGGCAAACTGCTGTCTGATCAGCAATCCCCATGTATCAAAGCTGAATCCAACTTGTCAAGCTCCAATTGCCAAAATCATCCAAGACATTATTCAATTCAATTCATGTTGCACTAGTGTTGAAAAGATCAATGTTGAAGCACTGGTTCCTTGCCGGTCTTGCAATATTAAAGTTGAGCAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E353355" ref_strand="+" ref_description="SGN-E353355 [cTOS-15-G10]">
      <seq>tcaacacctggaatgcaggattgtttgcattggtgcttgcctggtgttccagatacatggaatgaagttctttttgctcaactttaatattgcaagaccggcaaggaaccagtgcttcaacattgatctcttcaacactagtgcaacatgaattgaattgaataatgtcttggatgattttggcaattggagcttgacaagttggattcagctttgatacatggggattgctgatcagacagcagtttgcaccatattttaggagtagatgagttatacattatttttggaatttatagtttggtttgtcctaccatttgttagagactagattctttgaggggttggggtacggaagaggcttgacccttgacatgtacggtgagtttgtaagacatgagagtgtacttggaagaacaacacaaggggatttttctagtgatcagatgatgcttaaatcctaattcatttttatccttttatttat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="14876" stop="13790"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14576" g_stop="14090" g_length="487"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="487" r_length="487" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E353355" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>487</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E353355" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14576" e_stop="14090"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAACACCTGGAATGCAGGATTGTTTGCATTGGTGCTTGCCTGGTGTTCCAGATACATGGAATGAAGTTCTTTTTGCTCAACTTTAATATTGCAAGACCGGCAAGGAACCAGTGCTTCAACATTGATCTCTTCAACACTAGTGCAACATGAATTGAATTGAATAATGTCTTGGATGATTTTGGCAATTGGAGCTTGACAAGTTGGATTCAGCTTTGATACATGGGGATTGCTGATCAGACAGCAGTTTGCACCATATTTTAGGAGTAGATGAGTTATACATTATTTTTGGAATTTATAGTTTGGTTTGTCCTACCATTTGTTAGAGACTAGATTCTTTGAGGGGTTGGGGTACGGAAGAGGCTTGACCCTTGACATGTACGGTGAGTTTGTAAGACATGAGAGTGTACTTGGAAGAACAACACAAGGGGATTTTTCTAGTGATCAGATGATGCTTAAATCCTAATTCATTTTTATCCTTTTATTTAT</genome_strand>
        <mrna_strand>TCAACACCTGGAATGCAGGATTGTTTGCATTGGTGCTTGCCTGGTGTTCCAGATACATGGAATGAAGTTCTTTTTGCTCAACTTTAATATTGCAAGACCGGCAAGGAACCAGTGCTTCAACATTGATCTCTTCAACACTAGTGCAACATGAATTGAATTGAATAATGTCTTGGATGATTTTGGCAATTGGAGCTTGACAAGTTGGATTCAGCTTTGATACATGGGGATTGCTGATCAGACAGCAGTTTGCACCATATTTTAGGAGTAGATGAGTTATACATTATTTTTGGAATTTATAGTTTGGTTTGTCCTACCATTTGTTAGAGACTAGATTCTTTGAGGGGTTGGGGTACGGAAGAGGCTTGACCCTTGACATGTACGGTGAGTTTGTAAGACATGAGAGTGTACTTGGAAGAACAACACAAGGGGATTTTTCTAGTGATCAGATGATGCTTAAATCCTAATTCATTTTTATCCTTTTATTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E451410" ref_strand="+" ref_description="SGN-E451410 [cSTS-12-N11]">
      <seq>attggttcttccttcttctccagctatcttcttcatcttcaaacttaatatctctgagttgatttttttcttctaaacttcaattttgcatcattattgcataaatatttcgaaactgaattcatttttttttatttgctaaagaaattattgttccatgatcaaattggattcggaagttagatttcaggcgttttcagatactaaactgaagtgaacacaacatccactatggtggaatgacttcaagtacataagttcctatgaattgaggatgaagggaggtttaaaggttccactgatctctctcatccttattggatttgtctgcgccagtgttattattttggcatgcgtgaaaagcccctttctctcttattggacaccatctcaagatcgtgtcttccagatttctccagattataaagtgaaagatgaagaagttttaagagaaagaaatagatcagggcaatcagaagaaaatgtgaactttgaatcttccatttcgaactcttctacgaaggataaggtgacagaagaaccgattaataatactgagattgaaggaagtgcagctttgatacatggggggattgctgatcagacagtagtttgcaccatattttangagtagatgagttatacattattgttggaatttat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="20167" stop="13980"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19867" g_stop="19666" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="200" r_length="200" r_score="0.896"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19665" i_stop="18067" i_length="1599">
            <donor d_prob="0.998" d_score="0.84"/>
            <acceptor a_prob="0.094" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18066" g_stop="17848" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="201" r_stop="419" r_length="219" r_score="0.950"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17847" i_stop="16988" i_length="860">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.870" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16987" g_stop="16841" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="566" r_length="147" r_score="0.932"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="16840" i_stop="16409" i_length="432">
            <donor d_prob="0.898" d_score="0.88"/>
            <acceptor a_prob="0.862" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="16408" g_stop="16400" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="567" r_stop="575" r_length="9" r_score="0.889"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="16399" i_stop="14366" i_length="2034">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="14365" g_stop="14280" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="576" r_stop="663" r_length="88" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E451410" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>663</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E451410" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19867" e_stop="19666"/>
          <exon e_start="18066" e_stop="17848"/>
          <exon e_start="16987" e_stop="16841"/>
          <exon e_start="16408" e_stop="16400"/>
          <exon e_start="14365" e_stop="14280"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGGCTCTTCCTTCTTCTCCAGCTATCTTCTTCACCTTCAAACTTAGTAT-TCTGAGTT-AATTTTTTCTTCTAAACTTCAATTTTGCATCATTATTGCATAAAATTTTCGAAACTGAATTCAATTTTTTTGTTATTTGCTAAAGAAATTATCGTTTC-TGATCAAATAGGAGGATTCGGAGGTTAGATTTCAGGCGTTTTCAGGTATGCATTTCTAGATTGTTGTATTTAGATTCACATTGCCGTAATTCTGTTTGTATTTGTGAATTTTCATTTGCCAATTTCTTAAATATCCATATTCTTGTTGTTGAATATTTCGCGTTGTGTATGTTATATAATATCTTCATCAGTATTTTCTAGGGTTCGCTCACTTATCATTGTAACTTGTGTAGATGTGTTTTGAACAGAACCAGAAATTTTGATAAGTAATTTCGTAAGGATCTACGAATTGTCTTGTTTTCTGGGTTTTTGTTAATGCATTTTTTTAATGTTAAATAATTCCTTTTTTTAATTTTTAAAAACTAGCATTTGGAACTAGTTTTGACTTTATAAGTTAACACTACTTGAGGGGACAAAGACCATCGATGAATCTGCTGCAATCTGAACTTCAGTAGTTGATGTGTGCTTACGGAAAAAGTAGCTCGGTGCTTTGTTCAAAACTGAAGTGATTAGGAACAAAACCAACATTATTTCTTTGATGTTCAGATGAGTATAAATATTCAAGTAATTCATGAGAATTCAAAGAACAGCTCTAGAATTCTAGAAACAGGTATTTGGTTATATTGGATCATCCAAAAATGCAGCTGGACACATGTCAGGTTCTCCGAAAATGGGTAACTTTTGGACGATCTGACATGCAAAGGATCTAAGCAAGTAATATGTTAGAAGAGAGCAGCATATGCCCTCACTTAAATGCTTCCATCACCACCTATAGATAGAGGTGGTCATTTTGAGTTATGATCAAGCAAGAAGTGAGCAATCAAGAAAGAACGTGTAAGAGAAAATGTGATAAATAAGAAAGAGCAACAATTAGAGCTGCTACAGTGTGAGCAAAGGGAAAAATTGCATTGAAAAGATTTATAAGACCGAAGTTGCTTTGTAGTTTGAAATGATAACATTCAAGTTGGGAGAAACTACTTGTATTCAACATTAAGATGCAGGGTTAAATGGAGGTTAAAAAGATCTTATAGATGGCAAAGGCAGGGTCAGCTTGGTCATGAAATTAGGTGGGGGAACCCAAAAAGGGCCCTTGGATATGGAGAAGGAAGCTAAAGGAAGTATATCTTCTGCTGATCTAGGAGGAATCTCAAATGTTGACAATTTGATTGTAATTTCATACAAAGGAAGGTTTTTCTTTATCATGCATCTCAAATGATAAGAAGGTTTTACATCTCATATCTGTACTAATTAATGATAAAGGGGACATAGAAGTAGTTTTGGACTTAATTTTACTGTGAGCCTACAACACCCTCATTACCCCCTATATAGATAAGAAGAGAGGGTAACTGTAAGAGTGTTAGTTTCCTTTTGATTCTCTCTCTCTCTATCACTTCTACTTATTTTTTTTGTTTCAAGCTTGTATTTCTACTTAATTAACTCAAACAAACTTTACAGCATAATTGGTGGCTAGTAGAAAATTATTGTCTATCTGTCATGGAGGTGGCTTCTTATATATTTCTGTTGTAAATTTTTGTTGTCTATATCAGGAGTCTAAAATTGTCCTGTGAATCTCTAATCAATTTCTTTCCACCAGAACACTATTTTCCAGTCTTGCTTTAAACATTTCCCTTTCAGCTATTTCAGATTCTAAACTGAAGTGAACAGAACATCCATTATGCTGGAATGACTTCAAGTACATAAGATCCTATGCATTGAGGATGAAGGGAGGTTTAAAGGTTCCACTGATCTCTCTCATCCTTATTGGATTTGTCTGCGCCAGTATTATTATTTTGGCATACGTGAAAAGCCCTTTTCTCTCTTATTGGACATCATCTCAAGACCGTGTCTTCCAGATTTCTCCAGGTTTGGCATAAATTCTCTTTTGACATTTTCCATACCATTGGTAATTCATTTTCCACTTTAAATTAGCAAATATGTTGACCCATTTGAAGATAAGGTAGTGTATATTAGGTCATAAAAGTTGCTGTTATTTGGCAGTTCAACCTTTTTATTTTTGTGAGAAAAAATCTCTTTGCATCTGTTTAGTGGTATGAAGCATTCTTTTACTGAGATGCAGTTACGAGCCAGTGGTTGCATAAAACTCAATACCACTGGAGCAGCCATTGTAGATAACACGTACCAGAACAAATCATGTCTAAATAAACAAAGGTGTTTTATTTACGCTGGATCACATTGCTGTATTCGAGTTGAGATGACATGAAACTTGGCAGAAGCTCTTTGTTGTGGATACCTCTCACCTGGTTGATCTGCTTGAATTATGCTAAAACATAAAGCTTCTTTTCTCAACTTTTTCCCAGTAAATTATGATATCATCTGTTTCTTCAACAACTTTAAGTAATAAGGCTACTAATCTAAATTCCCCACTTAGTGGATACGTCCCATTAAAGATCCTACCTTGACTTTTCTAGGTATTGAGAGTGGAATGTTTGGATTAGTTGTCTTATGCATTTTGGTGCATAAGTGTTCTAACATAATGTTTCAAATATAAAAAAGTTGAATATTAATCGATCGGATGTCATGTAGAGTTTGAAACAATAAAATATAGTATGATTTGACATCAATTTAAATGTTGGAGGGAGGAAAAAGCTTTCCTCTTTAAGGTACGTAGTTGTTTTGGGACAAACCAAAAAGTTAAATAGAACTTGATGGAAATGTTGCCAAATCCTATTGGAGCACTTATCTATTCTTTGTTTCTCTAGCAGATTATAAAGTGAAAGATGAAGAAGTTTTAAAAGAAAGAAATAGATCAGGGCAATCAGAAGAAAATGTGAACTTTGAATCTGCCATTTCACACTCTTCAATGAAGGATAAGGTGACTGAAGAACCAATTACTAATACTGAGATCGAAGGTACAGTATGTTCGAGTACTATCTTTCATTTTCCTGCGTGCCTCAAATCATGAAGAATTAGTGGTAATAGTACAGTAATGTGTCAGTTTTCTATCCTTCAAATGTGAACTTCCCTTTTCCTGAGTTGTATGAATAAAATAGCTCCTAATCTGCTTATTGTATTACTGAATCTGTTGCTTCCAGCTCCTCAACTTTTATTAATGCTTACCAAAGTGTGAGTTTTAGGGGGGGGGGGGGTTGCCCTTCTCCGAACCCTGCTAACTTGAGATGCTTTGTGCACCCGGTTCCTTTTTACAGTGTTATTTCTTTGCAGTAAAGAACTATTTTCACTGGTATCTATTCATGTTTTGTACTATCCTTGTACTCTGAGATACCATTGTGGTTAATCAATCACTAGTCTCCACAGCTTCATGTTTTTATGGTCCTTTTCAGGAAGTGTAGGTATTCCTCTCAACTTTACCCAAAAAGGAGGAGATTTAAAAGCCTTGGGAGAAAAAAATAGTTCAAGAGAACAGGAAAATGAAGTCGCTGCTCCACTGGATTCTGCAGGCGTCGCTATAGAAAATATGACATCTGATTCAAAAGATCATGGTGATTATCATTCTATTTGATTCTTTGGTTCCTGCTCTTTAATGTTATTTATCTGTAAATTTTATCTTAATGTTCACAAAACTTGAATCTTGATGGATTTGAGTCATTTGATTTAAATGTCTTTGAATTAAATCCTAATTTCTTTCCTTATATAATTTTTTCACTCTTTCTTTGGTTCTGGATAATCTGAAAAATGGTCTTGTTTGCCAAGCGACGTATCCTTAATTGTTTGGTGAATTTGTTACAACGGTTAGTAAGTAGTTAGTTACTAATACCTTATCTTAATTTCCAGGTTGTAATTATGCTAAAGGTAGATGGGTCACAGATGATAGTCGGCCTTTATATTCTGGATTTCGCTGCAAGCGGTGGTTGTCAGCCATGTGGGCTTGCCGCTTGACACAGCGTACGGATTTTGAATACGAGAAACTACGTTGGAGACCAAGGGATTGCGAGATCGAAGAGTTTACAGGTGTTAAATTCCTGAAAAGGTATATTCTTTTTTTCTGAAACTGATCAACATCTGATGCTTGCAATATGTATAACCTAAGAAAAATTCTTATGAGCTCTATTAGAACTTTCTCTCTTTTTCTGAGTAGCATAAGTACTGTACCTACCATGTCTTGTCATGTATTTTCCTAGAGCAGAAGAGTGAGCTTGACTGAACCCACCCAACAGATTAGCACTTATATCGCACATAAACTGCAAGAAATTGTGACTATGGAACTCCATTATGTAGCGCTTGTTGTCCTCATCTCTCGCACATCCTAATGTCTGAATAGAGAAAATTCTTTTTGGACAACTTTTCCACGTCTAAGTTTCTTGTTGCATAGAAATATTGCAGTCTTCTCTCTTCCTCAAGTCTTCATGTGATACTTAGTTGACTTCATGACTCTTTCTACATGGAATTTTCTGAACTTGGTTGTGGATCTAGGATGGAGAACAAAACTCTGGCCTTCATTGGGGATTCCCTTGGCAGACAACAATTCCAGTCGCTTATGTGTATGATTACTGGTGGTGAAGACAGACCTGATGTTCTTGACGTGGGACGTGAATATGGTCTTGTAAAGGCTCGTCATGCTGTACGACCTGATGGATGGGCTTATCGATTTCCAAGGACCCAAACAACTATTCTTTACTATTGGTCTGCTAGTTTGTGTAACTTGACACCCATTAATGCCTCTAACCCTCTTACTGATTATGCCATGCACCTGGATCGTCCACCTGCATTTTTAAGTCGTTTCCTACCCAGATTTGATGTCCTTGTTCTTAACACAGGACACCATTGGAATAGAGGCAAGCTTAACGCCAACCGATGGGTCATGTATGTGGATGGTGTTCCTAACACGAACAGGAAAATAGCAGATATTAATGGTGCCAAGAATCTTACAATTCACAGTATCATTAAATGGGTAGATTCACAGCTGCCAAAATACCCTGGTCTTAAAGCATTTTACCGGTCTATATCGCCCAGACATTTTTTTAATGGAGATTGGAACACTGGAGGCACCTGTGATAACACCACTCCGCTTTCTGGTGGAAAGGAGGTTGTACAAGACGAATCTAGTGATGCTGGTGCAGCAGCGGCTGTAAAAGGAACAGCTGTGAAGCTTTTGGACATCACAGCTTTGTCTCAGCTGAGAGATGAAGGTCATATATCTCGATACAGCATCAGATCAACACCTGGAATGCAGGATTGTTTGCATTGGTGCTTGCCTGGTGTTCCAGATACATGGAATGAAGTTCTTTTTGCTCAACTTTAATATTGCAAGACCGGCAAGGAACCAGTGCTTCAACATTGATCTCTTCAACACTAGTGCAACATGAATTGAATTGAATAATGTCTTGGATGATTTTGGCAATTGGAGCTTGACAAGTTGGATTCAGCTTTGATACAT--GGGGATTGCTGATCAGACAGCAGTTTGCACCATATTTTAGGAGTAGATGAGTTATACATTATTTTTGGAATTTAT</genome_strand>
        <mrna_strand>ATTGGTTCTTCCTTCTTCTCCAGCTATCTTCTTCATCTTCAAACTTAATATCTCTGAGTTGATTTTTTTCTTCTAAACTTCAATTTTGCATCATTATTGCATAAATATTTCGAAACTGAATTC-ATTTTTTT-TTATTTGCTAAAGAAATTATTGTTCCATGATCAAAT---TGGATTCGGAAGTTAGATTTCAGGCGTTTTCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTAAACTGAAGTGAACACAACATCCACTATGGTGGAATGACTTCAAGTACATAAGTTCCTATGAATTGAGGATGAAGGGAGGTTTAAAGGTTCCACTGATCTCTCTCATCCTTATTGGATTTGTCTGCGCCAGTGTTATTATTTTGGCATGCGTGAAAAGCCCCTTTCTCTCTTATTGGACACCATCTCAAGATCGTGTCTTCCAGATTTCTCCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATAAAGTGAAAGATGAAGAAGTTTTAAGAGAAAGAAATAGATCAGGGCAATCAGAAGAAAATGTGAACTTTGAATCTTCCATTTCGAACTCTTCTACGAAGGATAAGGTGACAGAAGAACCGATTAATAATACTGAGATTGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTGCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGATACATGGGGGGATTGCTGATCAGACAGTAGTTTGCACCATATTTTANGAGTAGATGAGTTATACATTATTGTTGGAATTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E455293" ref_strand="+" ref_description="SGN-E455293 [cSTS-25-L6]">
      <seq>ggattgtgagatggaagagtttacaggtgttaaattcctgaaaaagatggagaacaaaactctggccttcattggggattctcttggcagacaacaattccagtcgcttatgtgtatgattactggtggtgaatactttacctgatgttctcgacgtgggacgtgactatggtcttgtaaaggctcgtcatgctgtacgacctgatggatgggcttatcgatttccgaggacccaaacaactattctttactattggtctgctagtttgtgtaacttgacacccattaatgcctctaaacctcttactgattatgccatgcacctggatcgtccacctgcatttttaagtcgtttcctacccagatttgatgtccttgtgctaaacacaggacaccattggaatagaggaaagcttaacgccaaccggtgggtcatgtatgtggatggtgttcctaacacgaacaggaaaattgcagatattaatggtgccaagaatcttacaattcacagtatcattaaatgggtagattcacagctgccaaaataccctggtcttaaagcattttaccggtctatatcgcccagacatttttttaatggaaattggaacactggagggacctgcgatatcaccac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="16106" stop="14428"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15806" g_stop="15762" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="45" r_length="45" r_score="0.933"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15761" i_stop="15319" i_length="443">
            <donor d_prob="0.999" d_score="0.93"/>
            <acceptor a_prob="0.904" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15318" g_stop="14728" g_length="591"/>
          <reference_exon_boundary r_type="cDNA" r_start="46" r_stop="637" r_length="592" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E455293" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>636</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E455293" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15806" e_stop="15762"/>
          <exon e_start="15318" e_stop="14728"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATTGCGAGATCGAAGAGTTTACAGGTGTTAAATTCCTGAAAAGGTATATTCTTTTTTTCTGAAACTGATCAACATCTGATGCTTGCAATATGTATAACCTAAGAAAAATTCTTATGAGCTCTATTAGAACTTTCTCTCTTTTTCTGAGTAGCATAAGTACTGTACCTACCATGTCTTGTCATGTATTTTCCTAGAGCAGAAGAGTGAGCTTGACTGAACCCACCCAACAGATTAGCACTTATATCGCACATAAACTGCAAGAAATTGTGACTATGGAACTCCATTATGTAGCGCTTGTTGTCCTCATCTCTCGCACATCCTAATGTCTGAATAGAGAAAATTCTTTTTGGACAACTTTTCCACGTCTAAGTTTCTTGTTGCATAGAAATATTGCAGTCTTCTCTCTTCCTCAAGTCTTCATGTGATACTTAGTTGACTTCATGACTCTTTCTACATGGAATTTTCTGAACTTGGTTGTGGATCTAGGATGGAGAACAAAACTCTGGCCTTCATTGGGGATTCCCTTGGCAGACAACAATTCCAGTCGCTTATGTGTATGATTACTGGTGGTGAAGAC-AGACCTGATGTTCTTGACGTGGGACGTGAATATGGTCTTGTAAAGGCTCGTCATGCTGTACGACCTGATGGATGGGCTTATCGATTTCCAAGGACCCAAACAACTATTCTTTACTATTGGTCTGCTAGTTTGTGTAACTTGACACCCATTAATGCCTCTAACCCTCTTACTGATTATGCCATGCACCTGGATCGTCCACCTGCATTTTTAAGTCGTTTCCTACCCAGATTTGATGTCCTTGTTCTTAACACAGGACACCATTGGAATAGAGGCAAGCTTAACGCCAACCGATGGGTCATGTATGTGGATGGTGTTCCTAACACGAACAGGAAAATAGCAGATATTAATGGTGCCAAGAATCTTACAATTCACAGTATCATTAAATGGGTAGATTCACAGCTGCCAAAATACCCTGGTCTTAAAGCATTTTACCGGTCTATATCGCCCAGACATTTTTTTAATGGAGATTGGAACACTGGAGGCACCTGTGATAACACCAC</genome_strand>
        <mrna_strand>GGATTGTGAGATGGAAGAGTTTACAGGTGTTAAATTCCTGAAAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAGAACAAAACTCTGGCCTTCATTGGGGATTCTCTTGGCAGACAACAATTCCAGTCGCTTATGTGTATGATTACTGGTGGTGAATACTTTACCTGATGTTCTCGACGTGGGACGTGACTATGGTCTTGTAAAGGCTCGTCATGCTGTACGACCTGATGGATGGGCTTATCGATTTCCGAGGACCCAAACAACTATTCTTTACTATTGGTCTGCTAGTTTGTGTAACTTGACACCCATTAATGCCTCTAAACCTCTTACTGATTATGCCATGCACCTGGATCGTCCACCTGCATTTTTAAGTCGTTTCCTACCCAGATTTGATGTCCTTGTGCTAAACACAGGACACCATTGGAATAGAGGAAAGCTTAACGCCAACCGGTGGGTCATGTATGTGGATGGTGTTCCTAACACGAACAGGAAAATTGCAGATATTAATGGTGCCAAGAATCTTACAATTCACAGTATCATTAAATGGGTAGATTCACAGCTGCCAAAATACCCTGGTCTTAAAGCATTTTACCGGTCTATATCGCCCAGACATTTTTTTAATGGAAATTGGAACACTGGAGGGACCTGCGATATCACCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E431812" ref_strand="+" ref_description="SGN-E431812 [STM-56-E17]">
      <seq>acacagcgtacggattttgaatatgagaaactacgttggagaccaagggattgtgagatggaagagtttacaggtgttaaattcctgaaaaagatggagaacaaaactctggccttcattggggattctcttggcagacaacaattccagtcgcttatgtgtatgattactggtggtgaagacagacctgatgttctcgacgtgggacgtgactatggtcttgtaaaggctcgtcatgctgtacgacctgatggatgggcttatcgatttccgaggacccaaacaactattctttactattggtctgctagtttgtgtaacttgacacccattaatgcctctaaccctcttactgattatgccatgcacctggatcgtccacctgcatttttaagtcgtttcctacccagatttgatgtccttgtgctaaacacaggacaccattggaatagaggaaagcttaacgccaaccggtgggtcatgtatgtggatggtgttcctaacacgaacaggaaaattgcagatattaatggtgccaagaatcttacaattcacagtatcattaaatgggtagattcacagctgccaaaataccctggtcttaaagcattttaccggtctatatcgcccagacatttttttaatgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="16153" stop="14464"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15853" g_stop="15762" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="0.957"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15761" i_stop="15319" i_length="443">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.904" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15318" g_stop="14764" g_length="555"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="647" r_length="555" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E431812" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>647</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E431812" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15853" e_stop="15762"/>
          <exon e_start="15318" e_stop="14764"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACACAGCGTACGGATTTTGAATACGAGAAACTACGTTGGAGACCAAGGGATTGCGAGATCGAAGAGTTTACAGGTGTTAAATTCCTGAAAAGGTATATTCTTTTTTTCTGAAACTGATCAACATCTGATGCTTGCAATATGTATAACCTAAGAAAAATTCTTATGAGCTCTATTAGAACTTTCTCTCTTTTTCTGAGTAGCATAAGTACTGTACCTACCATGTCTTGTCATGTATTTTCCTAGAGCAGAAGAGTGAGCTTGACTGAACCCACCCAACAGATTAGCACTTATATCGCACATAAACTGCAAGAAATTGTGACTATGGAACTCCATTATGTAGCGCTTGTTGTCCTCATCTCTCGCACATCCTAATGTCTGAATAGAGAAAATTCTTTTTGGACAACTTTTCCACGTCTAAGTTTCTTGTTGCATAGAAATATTGCAGTCTTCTCTCTTCCTCAAGTCTTCATGTGATACTTAGTTGACTTCATGACTCTTTCTACATGGAATTTTCTGAACTTGGTTGTGGATCTAGGATGGAGAACAAAACTCTGGCCTTCATTGGGGATTCCCTTGGCAGACAACAATTCCAGTCGCTTATGTGTATGATTACTGGTGGTGAAGACAGACCTGATGTTCTTGACGTGGGACGTGAATATGGTCTTGTAAAGGCTCGTCATGCTGTACGACCTGATGGATGGGCTTATCGATTTCCAAGGACCCAAACAACTATTCTTTACTATTGGTCTGCTAGTTTGTGTAACTTGACACCCATTAATGCCTCTAACCCTCTTACTGATTATGCCATGCACCTGGATCGTCCACCTGCATTTTTAAGTCGTTTCCTACCCAGATTTGATGTCCTTGTTCTTAACACAGGACACCATTGGAATAGAGGCAAGCTTAACGCCAACCGATGGGTCATGTATGTGGATGGTGTTCCTAACACGAACAGGAAAATAGCAGATATTAATGGTGCCAAGAATCTTACAATTCACAGTATCATTAAATGGGTAGATTCACAGCTGCCAAAATACCCTGGTCTTAAAGCATTTTACCGGTCTATATCGCCCAGACATTTTTTTAATGG</genome_strand>
        <mrna_strand>ACACAGCGTACGGATTTTGAATATGAGAAACTACGTTGGAGACCAAGGGATTGTGAGATGGAAGAGTTTACAGGTGTTAAATTCCTGAAAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAGAACAAAACTCTGGCCTTCATTGGGGATTCTCTTGGCAGACAACAATTCCAGTCGCTTATGTGTATGATTACTGGTGGTGAAGACAGACCTGATGTTCTCGACGTGGGACGTGACTATGGTCTTGTAAAGGCTCGTCATGCTGTACGACCTGATGGATGGGCTTATCGATTTCCGAGGACCCAAACAACTATTCTTTACTATTGGTCTGCTAGTTTGTGTAACTTGACACCCATTAATGCCTCTAACCCTCTTACTGATTATGCCATGCACCTGGATCGTCCACCTGCATTTTTAAGTCGTTTCCTACCCAGATTTGATGTCCTTGTGCTAAACACAGGACACCATTGGAATAGAGGAAAGCTTAACGCCAACCGGTGGGTCATGTATGTGGATGGTGTTCCTAACACGAACAGGAAAATTGCAGATATTAATGGTGCCAAGAATCTTACAATTCACAGTATCATTAAATGGGTAGATTCACAGCTGCCAAAATACCCTGGTCTTAAAGCATTTTACCGGTCTATATCGCCCAGACATTTTTTTAATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E465105" ref_strand="+" ref_description="SGN-E465105 [cPRO-20-I1]">
      <seq>acacagcgtacggattttgaatatgagaaactacgttggagaccaagggattgtgagatggaagagtttacaggtgttaaattcctgaaaaagatggagaacaaaactctggccttcattggggattctcttggcagacaacaattccagtcgcttatgtgtatgattactggtggtgaagacagacctgatgttctcgacgtgggacgtgactatggtcttgtaaaggctcgtcatgctgtacgacctgatggatgggcttatcgatttccgaggacccaaacaactattctttactattggtctgctagtttgtgtaacttgacacccattaatgcctctaaccctcttactgattatgccatgcacctggatcgtccacctgcatttttaagtcgtttcctacccagatttgatgtccttgtgctaaacacaggacaccattggaatagaggaaagcttaacgccaaccggtgggtcatgtatgtggatggtgttcctaacacgaacaggaaaattgcagatattaatggtgccaagaatcttacaattcacagtatcattaaatgggtagattcacagctgccaaaataccctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="16153" stop="14513"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15853" g_stop="15762" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="0.957"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15761" i_stop="15319" i_length="443">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.904" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15318" g_stop="14813" g_length="506"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="598" r_length="506" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E465105" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>598</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E465105" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15853" e_stop="15762"/>
          <exon e_start="15318" e_stop="14813"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACACAGCGTACGGATTTTGAATACGAGAAACTACGTTGGAGACCAAGGGATTGCGAGATCGAAGAGTTTACAGGTGTTAAATTCCTGAAAAGGTATATTCTTTTTTTCTGAAACTGATCAACATCTGATGCTTGCAATATGTATAACCTAAGAAAAATTCTTATGAGCTCTATTAGAACTTTCTCTCTTTTTCTGAGTAGCATAAGTACTGTACCTACCATGTCTTGTCATGTATTTTCCTAGAGCAGAAGAGTGAGCTTGACTGAACCCACCCAACAGATTAGCACTTATATCGCACATAAACTGCAAGAAATTGTGACTATGGAACTCCATTATGTAGCGCTTGTTGTCCTCATCTCTCGCACATCCTAATGTCTGAATAGAGAAAATTCTTTTTGGACAACTTTTCCACGTCTAAGTTTCTTGTTGCATAGAAATATTGCAGTCTTCTCTCTTCCTCAAGTCTTCATGTGATACTTAGTTGACTTCATGACTCTTTCTACATGGAATTTTCTGAACTTGGTTGTGGATCTAGGATGGAGAACAAAACTCTGGCCTTCATTGGGGATTCCCTTGGCAGACAACAATTCCAGTCGCTTATGTGTATGATTACTGGTGGTGAAGACAGACCTGATGTTCTTGACGTGGGACGTGAATATGGTCTTGTAAAGGCTCGTCATGCTGTACGACCTGATGGATGGGCTTATCGATTTCCAAGGACCCAAACAACTATTCTTTACTATTGGTCTGCTAGTTTGTGTAACTTGACACCCATTAATGCCTCTAACCCTCTTACTGATTATGCCATGCACCTGGATCGTCCACCTGCATTTTTAAGTCGTTTCCTACCCAGATTTGATGTCCTTGTTCTTAACACAGGACACCATTGGAATAGAGGCAAGCTTAACGCCAACCGATGGGTCATGTATGTGGATGGTGTTCCTAACACGAACAGGAAAATAGCAGATATTAATGGTGCCAAGAATCTTACAATTCACAGTATCATTAAATGGGTAGATTCACAGCTGCCAAAATACCCTG</genome_strand>
        <mrna_strand>ACACAGCGTACGGATTTTGAATATGAGAAACTACGTTGGAGACCAAGGGATTGTGAGATGGAAGAGTTTACAGGTGTTAAATTCCTGAAAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAGAACAAAACTCTGGCCTTCATTGGGGATTCTCTTGGCAGACAACAATTCCAGTCGCTTATGTGTATGATTACTGGTGGTGAAGACAGACCTGATGTTCTCGACGTGGGACGTGACTATGGTCTTGTAAAGGCTCGTCATGCTGTACGACCTGATGGATGGGCTTATCGATTTCCGAGGACCCAAACAACTATTCTTTACTATTGGTCTGCTAGTTTGTGTAACTTGACACCCATTAATGCCTCTAACCCTCTTACTGATTATGCCATGCACCTGGATCGTCCACCTGCATTTTTAAGTCGTTTCCTACCCAGATTTGATGTCCTTGTGCTAAACACAGGACACCATTGGAATAGAGGAAAGCTTAACGCCAACCGGTGGGTCATGTATGTGGATGGTGTTCCTAACACGAACAGGAAAATTGCAGATATTAATGGTGCCAAGAATCTTACAATTCACAGTATCATTAAATGGGTAGATTCACAGCTGCCAAAATACCCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E208475" ref_strand="+" ref_description="SGN-E208475 [cLEC-39-E3]">
      <seq>aaagatcatggttgtaattatgctaaaggtagatgggtcacagatgatagtcggcctttatattctggatttcgctgcaagcggtggttgtcagccatgtgggcttgccgcttgacacagcgtacggattttgaatacgagaaactacgttggagaccaagggattgcgagatcgaagagtttacaggtgttaaattcctgaaaaggatggagaacaaaactctggccttcattggggattcccttggcagacaacaattccagtcgcttatgtgtatgattactggtggtgaagacagacctgatgttcttgacgtgggacgtgaatatggtcttgtaaaggctcgtcatgctgtacgacctgatggatgggcttatcgatttccaaggacccaaacaactattctttactattggtctgctagtttgtgtaacttgacacccattaatgcctctaaccctcttactgattatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="16266" stop="14750"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16259" g_stop="16250" g_length="10"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="10" r_length="10" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16249" i_stop="15958" i_length="292">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15957" g_stop="15762" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="11" r_stop="206" r_length="196" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15761" i_stop="15319" i_length="443">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.904" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="15318" g_stop="15050" g_length="269"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="475" r_length="269" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E208475" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>475</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E208475" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16259" e_stop="16250"/>
          <exon e_start="15957" e_stop="15762"/>
          <exon e_start="15318" e_stop="15050"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGATCATGGTGATTATCATTCTATTTGATTCTTTGGTTCCTGCTCTTTAATGTTATTTATCTGTAAATTTTATCTTAATGTTCACAAAACTTGAATCTTGATGGATTTGAGTCATTTGATTTAAATGTCTTTGAATTAAATCCTAATTTCTTTCCTTATATAATTTTTTCACTCTTTCTTTGGTTCTGGATAATCTGAAAAATGGTCTTGTTTGCCAAGCGACGTATCCTTAATTGTTTGGTGAATTTGTTACAACGGTTAGTAAGTAGTTAGTTACTAATACCTTATCTTAATTTCCAGGTTGTAATTATGCTAAAGGTAGATGGGTCACAGATGATAGTCGGCCTTTATATTCTGGATTTCGCTGCAAGCGGTGGTTGTCAGCCATGTGGGCTTGCCGCTTGACACAGCGTACGGATTTTGAATACGAGAAACTACGTTGGAGACCAAGGGATTGCGAGATCGAAGAGTTTACAGGTGTTAAATTCCTGAAAAGGTATATTCTTTTTTTCTGAAACTGATCAACATCTGATGCTTGCAATATGTATAACCTAAGAAAAATTCTTATGAGCTCTATTAGAACTTTCTCTCTTTTTCTGAGTAGCATAAGTACTGTACCTACCATGTCTTGTCATGTATTTTCCTAGAGCAGAAGAGTGAGCTTGACTGAACCCACCCAACAGATTAGCACTTATATCGCACATAAACTGCAAGAAATTGTGACTATGGAACTCCATTATGTAGCGCTTGTTGTCCTCATCTCTCGCACATCCTAATGTCTGAATAGAGAAAATTCTTTTTGGACAACTTTTCCACGTCTAAGTTTCTTGTTGCATAGAAATATTGCAGTCTTCTCTCTTCCTCAAGTCTTCATGTGATACTTAGTTGACTTCATGACTCTTTCTACATGGAATTTTCTGAACTTGGTTGTGGATCTAGGATGGAGAACAAAACTCTGGCCTTCATTGGGGATTCCCTTGGCAGACAACAATTCCAGTCGCTTATGTGTATGATTACTGGTGGTGAAGACAGACCTGATGTTCTTGACGTGGGACGTGAATATGGTCTTGTAAAGGCTCGTCATGCTGTACGACCTGATGGATGGGCTTATCGATTTCCAAGGACCCAAACAACTATTCTTTACTATTGGTCTGCTAGTTTGTGTAACTTGACACCCATTAATGCCTCTAACCCTCTTACTGATTATG</genome_strand>
        <mrna_strand>AAAGATCATG....................................................................................................................................................................................................................................................................................................GTTGTAATTATGCTAAAGGTAGATGGGTCACAGATGATAGTCGGCCTTTATATTCTGGATTTCGCTGCAAGCGGTGGTTGTCAGCCATGTGGGCTTGCCGCTTGACACAGCGTACGGATTTTGAATACGAGAAACTACGTTGGAGACCAAGGGATTGCGAGATCGAAGAGTTTACAGGTGTTAAATTCCTGAAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAGAACAAAACTCTGGCCTTCATTGGGGATTCCCTTGGCAGACAACAATTCCAGTCGCTTATGTGTATGATTACTGGTGGTGAAGACAGACCTGATGTTCTTGACGTGGGACGTGAATATGGTCTTGTAAAGGCTCGTCATGCTGTACGACCTGATGGATGGGCTTATCGATTTCCAAGGACCCAAACAACTATTCTTTACTATTGGTCTGCTAGTTTGTGTAACTTGACACCCATTAATGCCTCTAACCCTCTTACTGATTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E543312" ref_strand="+" ref_description="SGN-E543312 [TUS-65-B1]">
      <seq>ctcctctctgtttctccattggctcttccttcttctccagctatcttcttcaccttcaaacttagtattctgagttaattttttcttctaaacttcaattttgcatcattattgcataaaattttcgaaactgaattcaatttttttgttatttgctaaagaaattatcgtttctgatcaaataggaggattcggaggttagatttcaggcgttttcagctatttcagattctaaactgaagtgaacagaacatccattatgctggaatgacttcaagtacataagatcctatgcattgaggatgaagggaggtttaaaggttccactgatctctctcatccttattggatttgtctgcgccagtattattattttggcatacgtgaaaagcccttttctctcttattggacatcatctcaagaccgtgtcttccagatttctccagattataaagtgaaagatgaagaagttttaaaagaaagaaatagatcagggcaatcagaagaaaatgtgaactttgaatctgccatttcacactcttcaatgaaggataaggtgactgaagaaccaattactaatactgagatcgaaggaagtgtaggtattcctctcaactttacccaaaaaggaggagatttaaaagccttgggagaaaaaaatagttcaagagaacaggaaaatgaagtcgctgctccactggattctgcaggcgtcgctatagaaatatgacatctgattcaaagatcatggttgtaatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="20184" stop="15943"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19884" g_stop="19666" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="219" r_length="219" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19665" i_stop="18076" i_length="1590">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.058" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18075" g_stop="17848" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="220" r_stop="447" r_length="228" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17847" i_stop="16988" i_length="860">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.870" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16987" g_stop="16841" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="448" r_stop="594" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="16840" i_stop="16409" i_length="432">
            <donor d_prob="0.898" d_score="1.00"/>
            <acceptor a_prob="0.862" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="16408" g_stop="16250" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="595" r_stop="751" r_length="157" r_score="0.987"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="16249" i_stop="15958" i_length="292">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.986" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="15957" g_stop="15948" g_length="10"/>
          <reference_exon_boundary r_type="cDNA" r_start="752" r_stop="761" r_length="10" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E543312" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>763</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E543312" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19884" e_stop="19666"/>
          <exon e_start="18075" e_stop="17848"/>
          <exon e_start="16987" e_stop="16841"/>
          <exon e_start="16408" e_stop="16250"/>
          <exon e_start="15957" e_stop="15948"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCTCTCTGTTTCTCCATTGGCTCTTCCTTCTTCTCCAGCTATCTTCTTCACCTTCAAACTTAGTATTCTGAGTTAATTTTTTCTTCTAAACTTCAATTTTGCATCATTATTGCATAAAATTTTCGAAACTGAATTCAATTTTTTTGTTATTTGCTAAAGAAATTATCGTTTCTGATCAAATAGGAGGATTCGGAGGTTAGATTTCAGGCGTTTTCAGGTATGCATTTCTAGATTGTTGTATTTAGATTCACATTGCCGTAATTCTGTTTGTATTTGTGAATTTTCATTTGCCAATTTCTTAAATATCCATATTCTTGTTGTTGAATATTTCGCGTTGTGTATGTTATATAATATCTTCATCAGTATTTTCTAGGGTTCGCTCACTTATCATTGTAACTTGTGTAGATGTGTTTTGAACAGAACCAGAAATTTTGATAAGTAATTTCGTAAGGATCTACGAATTGTCTTGTTTTCTGGGTTTTTGTTAATGCATTTTTTTAATGTTAAATAATTCCTTTTTTTAATTTTTAAAAACTAGCATTTGGAACTAGTTTTGACTTTATAAGTTAACACTACTTGAGGGGACAAAGACCATCGATGAATCTGCTGCAATCTGAACTTCAGTAGTTGATGTGTGCTTACGGAAAAAGTAGCTCGGTGCTTTGTTCAAAACTGAAGTGATTAGGAACAAAACCAACATTATTTCTTTGATGTTCAGATGAGTATAAATATTCAAGTAATTCATGAGAATTCAAAGAACAGCTCTAGAATTCTAGAAACAGGTATTTGGTTATATTGGATCATCCAAAAATGCAGCTGGACACATGTCAGGTTCTCCGAAAATGGGTAACTTTTGGACGATCTGACATGCAAAGGATCTAAGCAAGTAATATGTTAGAAGAGAGCAGCATATGCCCTCACTTAAATGCTTCCATCACCACCTATAGATAGAGGTGGTCATTTTGAGTTATGATCAAGCAAGAAGTGAGCAATCAAGAAAGAACGTGTAAGAGAAAATGTGATAAATAAGAAAGAGCAACAATTAGAGCTGCTACAGTGTGAGCAAAGGGAAAAATTGCATTGAAAAGATTTATAAGACCGAAGTTGCTTTGTAGTTTGAAATGATAACATTCAAGTTGGGAGAAACTACTTGTATTCAACATTAAGATGCAGGGTTAAATGGAGGTTAAAAAGATCTTATAGATGGCAAAGGCAGGGTCAGCTTGGTCATGAAATTAGGTGGGGGAACCCAAAAAGGGCCCTTGGATATGGAGAAGGAAGCTAAAGGAAGTATATCTTCTGCTGATCTAGGAGGAATCTCAAATGTTGACAATTTGATTGTAATTTCATACAAAGGAAGGTTTTTCTTTATCATGCATCTCAAATGATAAGAAGGTTTTACATCTCATATCTGTACTAATTAATGATAAAGGGGACATAGAAGTAGTTTTGGACTTAATTTTACTGTGAGCCTACAACACCCTCATTACCCCCTATATAGATAAGAAGAGAGGGTAACTGTAAGAGTGTTAGTTTCCTTTTGATTCTCTCTCTCTCTATCACTTCTACTTATTTTTTTTGTTTCAAGCTTGTATTTCTACTTAATTAACTCAAACAAACTTTACAGCATAATTGGTGGCTAGTAGAAAATTATTGTCTATCTGTCATGGAGGTGGCTTCTTATATATTTCTGTTGTAAATTTTTGTTGTCTATATCAGGAGTCTAAAATTGTCCTGTGAATCTCTAATCAATTTCTTTCCACCAGAACACTATTTTCCAGTCTTGCTTTAAACATTTCCCTTTCAGCTATTTCAGATTCTAAACTGAAGTGAACAGAACATCCATTATGCTGGAATGACTTCAAGTACATAAGATCCTATGCATTGAGGATGAAGGGAGGTTTAAAGGTTCCACTGATCTCTCTCATCCTTATTGGATTTGTCTGCGCCAGTATTATTATTTTGGCATACGTGAAAAGCCCTTTTCTCTCTTATTGGACATCATCTCAAGACCGTGTCTTCCAGATTTCTCCAGGTTTGGCATAAATTCTCTTTTGACATTTTCCATACCATTGGTAATTCATTTTCCACTTTAAATTAGCAAATATGTTGACCCATTTGAAGATAAGGTAGTGTATATTAGGTCATAAAAGTTGCTGTTATTTGGCAGTTCAACCTTTTTATTTTTGTGAGAAAAAATCTCTTTGCATCTGTTTAGTGGTATGAAGCATTCTTTTACTGAGATGCAGTTACGAGCCAGTGGTTGCATAAAACTCAATACCACTGGAGCAGCCATTGTAGATAACACGTACCAGAACAAATCATGTCTAAATAAACAAAGGTGTTTTATTTACGCTGGATCACATTGCTGTATTCGAGTTGAGATGACATGAAACTTGGCAGAAGCTCTTTGTTGTGGATACCTCTCACCTGGTTGATCTGCTTGAATTATGCTAAAACATAAAGCTTCTTTTCTCAACTTTTTCCCAGTAAATTATGATATCATCTGTTTCTTCAACAACTTTAAGTAATAAGGCTACTAATCTAAATTCCCCACTTAGTGGATACGTCCCATTAAAGATCCTACCTTGACTTTTCTAGGTATTGAGAGTGGAATGTTTGGATTAGTTGTCTTATGCATTTTGGTGCATAAGTGTTCTAACATAATGTTTCAAATATAAAAAAGTTGAATATTAATCGATCGGATGTCATGTAGAGTTTGAAACAATAAAATATAGTATGATTTGACATCAATTTAAATGTTGGAGGGAGGAAAAAGCTTTCCTCTTTAAGGTACGTAGTTGTTTTGGGACAAACCAAAAAGTTAAATAGAACTTGATGGAAATGTTGCCAAATCCTATTGGAGCACTTATCTATTCTTTGTTTCTCTAGCAGATTATAAAGTGAAAGATGAAGAAGTTTTAAAAGAAAGAAATAGATCAGGGCAATCAGAAGAAAATGTGAACTTTGAATCTGCCATTTCACACTCTTCAATGAAGGATAAGGTGACTGAAGAACCAATTACTAATACTGAGATCGAAGGTACAGTATGTTCGAGTACTATCTTTCATTTTCCTGCGTGCCTCAAATCATGAAGAATTAGTGGTAATAGTACAGTAATGTGTCAGTTTTCTATCCTTCAAATGTGAACTTCCCTTTTCCTGAGTTGTATGAATAAAATAGCTCCTAATCTGCTTATTGTATTACTGAATCTGTTGCTTCCAGCTCCTCAACTTTTATTAATGCTTACCAAAGTGTGAGTTTTAGGGGGGGGGGGGGTTGCCCTTCTCCGAACCCTGCTAACTTGAGATGCTTTGTGCACCCGGTTCCTTTTTACAGTGTTATTTCTTTGCAGTAAAGAACTATTTTCACTGGTATCTATTCATGTTTTGTACTATCCTTGTACTCTGAGATACCATTGTGGTTAATCAATCACTAGTCTCCACAGCTTCATGTTTTTATGGTCCTTTTCAGGAAGTGTAGGTATTCCTCTCAACTTTACCCAAAAAGGAGGAGATTTAAAAGCCTTGGGAGAAAAAAATAGTTCAAGAGAACAGGAAAATGAAGTCGCTGCTCCACTGGATTCTGCAGGCGTCGCTATAGAAAATATGACATCTGATTCAAAAGATCATGGTGATTATCATTCTATTTGATTCTTTGGTTCCTGCTCTTTAATGTTATTTATCTGTAAATTTTATCTTAATGTTCACAAAACTTGAATCTTGATGGATTTGAGTCATTTGATTTAAATGTCTTTGAATTAAATCCTAATTTCTTTCCTTATATAATTTTTTCACTCTTTCTTTGGTTCTGGATAATCTGAAAAATGGTCTTGTTTGCCAAGCGACGTATCCTTAATTGTTTGGTGAATTTGTTACAACGGTTAGTAAGTAGTTAGTTACTAATACCTTATCTTAATTTCCAGGTTGTAATTA</genome_strand>
        <mrna_strand>CTCCTCTCTGTTTCTCCATTGGCTCTTCCTTCTTCTCCAGCTATCTTCTTCACCTTCAAACTTAGTATTCTGAGTTAATTTTTTCTTCTAAACTTCAATTTTGCATCATTATTGCATAAAATTTTCGAAACTGAATTCAATTTTTTTGTTATTTGCTAAAGAAATTATCGTTTCTGATCAAATAGGAGGATTCGGAGGTTAGATTTCAGGCGTTTTCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTTCAGATTCTAAACTGAAGTGAACAGAACATCCATTATGCTGGAATGACTTCAAGTACATAAGATCCTATGCATTGAGGATGAAGGGAGGTTTAAAGGTTCCACTGATCTCTCTCATCCTTATTGGATTTGTCTGCGCCAGTATTATTATTTTGGCATACGTGAAAAGCCCTTTTCTCTCTTATTGGACATCATCTCAAGACCGTGTCTTCCAGATTTCTCCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATAAAGTGAAAGATGAAGAAGTTTTAAAAGAAAGAAATAGATCAGGGCAATCAGAAGAAAATGTGAACTTTGAATCTGCCATTTCACACTCTTCAATGAAGGATAAGGTGACTGAAGAACCAATTACTAATACTGAGATCGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTGTAGGTATTCCTCTCAACTTTACCCAAAAAGGAGGAGATTTAAAAGCCTTGGGAGAAAAAAATAGTTCAAGAGAACAGGAAAATGAAGTCGCTGCTCCACTGGATTCTGCAGGCGTCGCTATAG-AAATATGACATCTGATTC-AAAGATCATG....................................................................................................................................................................................................................................................................................................GTTGTAATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E406940" ref_strand="+" ref_description="SGN-E406940 [PPI-5-D5]">
      <seq>ctccagctatcttcttcatcttcaaacttaatatctctgagttgatttttttcttctaaacttcaattttgcatcattattgcataaatatttcgaaactgaattcatttttttttatttgctaaagaaattattgttccatgatcaaattggattcggaagttagatttcaggcgttttcagatactaaactgaagtgaacacaacatccactatggtggaatgacttcaagtacataagttcctatgaattgaggatgaagggaggtttaaaggttccactgatctctctcatccttattggatttgtctgcgccagtgttattattttggcatgcgtgaaaagcccctttctctcttattggacaccatctcaagatcgtgtcttccagatttctccagattataaagtgaaagatgaagaagttttaagagaaagaaatagatcagggcaatcagaagaaaatgtgaactttgaatcttccatttcgaactcttctacgaaggataaggtgacagaagaaccgattaataatactgagattgaaggaagtgcagctattcctcccagctttacccaaaaaggaggagatttaaaagctttggaagaaaaaaatagttcaagagaacaggaaaacgaagtcgctgctccactgaattctgcaggcatcgctatagaaaatatgacatctgactcaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="20150" stop="15958"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19850" g_stop="19666" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="183" r_length="183" r_score="0.892"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19665" i_stop="18067" i_length="1599">
            <donor d_prob="0.998" d_score="0.84"/>
            <acceptor a_prob="0.094" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18066" g_stop="17848" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="402" r_length="219" r_score="0.950"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17847" i_stop="16988" i_length="860">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.870" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16987" g_stop="16841" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="403" r_stop="549" r_length="147" r_score="0.932"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="16840" i_stop="16409" i_length="432">
            <donor d_prob="0.898" d_score="0.88"/>
            <acceptor a_prob="0.862" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="16408" g_stop="16258" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="550" r_stop="700" r_length="151" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E406940" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>702</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E406940" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19850" e_stop="19666"/>
          <exon e_start="18066" e_stop="17848"/>
          <exon e_start="16987" e_stop="16841"/>
          <exon e_start="16408" e_stop="16258"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCAGCTATCTTCTTCACCTTCAAACTTAGTAT-TCTGAGTT-AATTTTTTCTTCTAAACTTCAATTTTGCATCATTATTGCATAAAATTTTCGAAACTGAATTCAATTTTTTTGTTATTTGCTAAAGAAATTATCGTTTC-TGATCAAATAGGAGGATTCGGAGGTTAGATTTCAGGCGTTTTCAGGTATGCATTTCTAGATTGTTGTATTTAGATTCACATTGCCGTAATTCTGTTTGTATTTGTGAATTTTCATTTGCCAATTTCTTAAATATCCATATTCTTGTTGTTGAATATTTCGCGTTGTGTATGTTATATAATATCTTCATCAGTATTTTCTAGGGTTCGCTCACTTATCATTGTAACTTGTGTAGATGTGTTTTGAACAGAACCAGAAATTTTGATAAGTAATTTCGTAAGGATCTACGAATTGTCTTGTTTTCTGGGTTTTTGTTAATGCATTTTTTTAATGTTAAATAATTCCTTTTTTTAATTTTTAAAAACTAGCATTTGGAACTAGTTTTGACTTTATAAGTTAACACTACTTGAGGGGACAAAGACCATCGATGAATCTGCTGCAATCTGAACTTCAGTAGTTGATGTGTGCTTACGGAAAAAGTAGCTCGGTGCTTTGTTCAAAACTGAAGTGATTAGGAACAAAACCAACATTATTTCTTTGATGTTCAGATGAGTATAAATATTCAAGTAATTCATGAGAATTCAAAGAACAGCTCTAGAATTCTAGAAACAGGTATTTGGTTATATTGGATCATCCAAAAATGCAGCTGGACACATGTCAGGTTCTCCGAAAATGGGTAACTTTTGGACGATCTGACATGCAAAGGATCTAAGCAAGTAATATGTTAGAAGAGAGCAGCATATGCCCTCACTTAAATGCTTCCATCACCACCTATAGATAGAGGTGGTCATTTTGAGTTATGATCAAGCAAGAAGTGAGCAATCAAGAAAGAACGTGTAAGAGAAAATGTGATAAATAAGAAAGAGCAACAATTAGAGCTGCTACAGTGTGAGCAAAGGGAAAAATTGCATTGAAAAGATTTATAAGACCGAAGTTGCTTTGTAGTTTGAAATGATAACATTCAAGTTGGGAGAAACTACTTGTATTCAACATTAAGATGCAGGGTTAAATGGAGGTTAAAAAGATCTTATAGATGGCAAAGGCAGGGTCAGCTTGGTCATGAAATTAGGTGGGGGAACCCAAAAAGGGCCCTTGGATATGGAGAAGGAAGCTAAAGGAAGTATATCTTCTGCTGATCTAGGAGGAATCTCAAATGTTGACAATTTGATTGTAATTTCATACAAAGGAAGGTTTTTCTTTATCATGCATCTCAAATGATAAGAAGGTTTTACATCTCATATCTGTACTAATTAATGATAAAGGGGACATAGAAGTAGTTTTGGACTTAATTTTACTGTGAGCCTACAACACCCTCATTACCCCCTATATAGATAAGAAGAGAGGGTAACTGTAAGAGTGTTAGTTTCCTTTTGATTCTCTCTCTCTCTATCACTTCTACTTATTTTTTTTGTTTCAAGCTTGTATTTCTACTTAATTAACTCAAACAAACTTTACAGCATAATTGGTGGCTAGTAGAAAATTATTGTCTATCTGTCATGGAGGTGGCTTCTTATATATTTCTGTTGTAAATTTTTGTTGTCTATATCAGGAGTCTAAAATTGTCCTGTGAATCTCTAATCAATTTCTTTCCACCAGAACACTATTTTCCAGTCTTGCTTTAAACATTTCCCTTTCAGCTATTTCAGATTCTAAACTGAAGTGAACAGAACATCCATTATGCTGGAATGACTTCAAGTACATAAGATCCTATGCATTGAGGATGAAGGGAGGTTTAAAGGTTCCACTGATCTCTCTCATCCTTATTGGATTTGTCTGCGCCAGTATTATTATTTTGGCATACGTGAAAAGCCCTTTTCTCTCTTATTGGACATCATCTCAAGACCGTGTCTTCCAGATTTCTCCAGGTTTGGCATAAATTCTCTTTTGACATTTTCCATACCATTGGTAATTCATTTTCCACTTTAAATTAGCAAATATGTTGACCCATTTGAAGATAAGGTAGTGTATATTAGGTCATAAAAGTTGCTGTTATTTGGCAGTTCAACCTTTTTATTTTTGTGAGAAAAAATCTCTTTGCATCTGTTTAGTGGTATGAAGCATTCTTTTACTGAGATGCAGTTACGAGCCAGTGGTTGCATAAAACTCAATACCACTGGAGCAGCCATTGTAGATAACACGTACCAGAACAAATCATGTCTAAATAAACAAAGGTGTTTTATTTACGCTGGATCACATTGCTGTATTCGAGTTGAGATGACATGAAACTTGGCAGAAGCTCTTTGTTGTGGATACCTCTCACCTGGTTGATCTGCTTGAATTATGCTAAAACATAAAGCTTCTTTTCTCAACTTTTTCCCAGTAAATTATGATATCATCTGTTTCTTCAACAACTTTAAGTAATAAGGCTACTAATCTAAATTCCCCACTTAGTGGATACGTCCCATTAAAGATCCTACCTTGACTTTTCTAGGTATTGAGAGTGGAATGTTTGGATTAGTTGTCTTATGCATTTTGGTGCATAAGTGTTCTAACATAATGTTTCAAATATAAAAAAGTTGAATATTAATCGATCGGATGTCATGTAGAGTTTGAAACAATAAAATATAGTATGATTTGACATCAATTTAAATGTTGGAGGGAGGAAAAAGCTTTCCTCTTTAAGGTACGTAGTTGTTTTGGGACAAACCAAAAAGTTAAATAGAACTTGATGGAAATGTTGCCAAATCCTATTGGAGCACTTATCTATTCTTTGTTTCTCTAGCAGATTATAAAGTGAAAGATGAAGAAGTTTTAAAAGAAAGAAATAGATCAGGGCAATCAGAAGAAAATGTGAACTTTGAATCTGCCATTTCACACTCTTCAATGAAGGATAAGGTGACTGAAGAACCAATTACTAATACTGAGATCGAAGGTACAGTATGTTCGAGTACTATCTTTCATTTTCCTGCGTGCCTCAAATCATGAAGAATTAGTGGTAATAGTACAGTAATGTGTCAGTTTTCTATCCTTCAAATGTGAACTTCCCTTTTCCTGAGTTGTATGAATAAAATAGCTCCTAATCTGCTTATTGTATTACTGAATCTGTTGCTTCCAGCTCCTCAACTTTTATTAATGCTTACCAAAGTGTGAGTTTTAGGGGGGGGGGGGGTTGCCCTTCTCCGAACCCTGCTAACTTGAGATGCTTTGTGCACCCGGTTCCTTTTTACAGTGTTATTTCTTTGCAGTAAAGAACTATTTTCACTGGTATCTATTCATGTTTTGTACTATCCTTGTACTCTGAGATACCATTGTGGTTAATCAATCACTAGTCTCCACAGCTTCATGTTTTTATGGTCCTTTTCAGGAAGTGTAGGTATTCCTCTCAACTTTACCCAAAAAGGAGGAGATTTAAAAGCCTTGGGAGAAAAAAATAGTTCAAGAGAACAGGAAAATGAAGTCGCTGCTCCACTGGATTCTGCAGGCGTCGCTATAGAAAATATGACATCTGATTCAAA</genome_strand>
        <mrna_strand>CTCCAGCTATCTTCTTCATCTTCAAACTTAATATCTCTGAGTTGATTTTTTTCTTCTAAACTTCAATTTTGCATCATTATTGCATAAATATTTCGAAACTGAATTC-ATTTTTTT-TTATTTGCTAAAGAAATTATTGTTCCATGATCAAAT---TGGATTCGGAAGTTAGATTTCAGGCGTTTTCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTAAACTGAAGTGAACACAACATCCACTATGGTGGAATGACTTCAAGTACATAAGTTCCTATGAATTGAGGATGAAGGGAGGTTTAAAGGTTCCACTGATCTCTCTCATCCTTATTGGATTTGTCTGCGCCAGTGTTATTATTTTGGCATGCGTGAAAAGCCCCTTTCTCTCTTATTGGACACCATCTCAAGATCGTGTCTTCCAGATTTCTCCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATAAAGTGAAAGATGAAGAAGTTTTAAGAGAAAGAAATAGATCAGGGCAATCAGAAGAAAATGTGAACTTTGAATCTTCCATTTCGAACTCTTCTACGAAGGATAAGGTGACAGAAGAACCGATTAATAATACTGAGATTGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTGCAGCTATTCCTCCCAGCTTTACCCAAAAAGGAGGAGATTTAAAAGCTTTGGAAGAAAAAAATAGTTCAAGAGAACAGGAAAACGAAGTCGCTGCTCCACTGAATTCTGCAGGCATCGCTATAGAAAATATGACATCTGACTCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E420924" ref_strand="+" ref_description="SGN-E420924 [STM-31-P20]">
      <seq>ctccagctatcttcttcatcttcaaacttaatatctctgagttgatttttttcttctaaacttcaattttgcatcattattgcataaatatttcgaaactgaattcatttttttttatttgctaaagaaattattgttccatgatcaaattggattcggaagttagatttcaggcgttttcagatactaaactgaagtgaacacaacatccactatggtggaatgacttcaagtacataagttcctatgaattgaggatgaagggaggtttaaaggttccactgatctctctcatccttattggatttgtctgcgccagtgttattattttggcatgcgtgaaaagcccctttctctcttattggacaccatctcaagatcgtgtcttccagatttctccagattataaagtgaaagatgaagaagttttaagagaaagaaatagatcagggcaatcagaagaaaatgtgaactttgaatcttccatttcgaactcttctacgaaggataaggtgacagaagaaccgattaataatactgagattgaaggaagtgcagctattcctcccagctttacccaaaaaggaggagatttaaaagctttggaagaaaaaaatagttcaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="20150" stop="16033"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19850" g_stop="19666" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="183" r_length="183" r_score="0.892"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19665" i_stop="18067" i_length="1599">
            <donor d_prob="0.998" d_score="0.84"/>
            <acceptor a_prob="0.094" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18066" g_stop="17848" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="402" r_length="219" r_score="0.950"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17847" i_stop="16988" i_length="860">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.870" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16987" g_stop="16841" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="403" r_stop="549" r_length="147" r_score="0.932"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="16840" i_stop="16409" i_length="432">
            <donor d_prob="0.898" d_score="0.88"/>
            <acceptor a_prob="0.862" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="16408" g_stop="16333" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="550" r_stop="625" r_length="76" r_score="0.921"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E420924" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>627</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E420924" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19850" e_stop="19666"/>
          <exon e_start="18066" e_stop="17848"/>
          <exon e_start="16987" e_stop="16841"/>
          <exon e_start="16408" e_stop="16333"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCAGCTATCTTCTTCACCTTCAAACTTAGTAT-TCTGAGTT-AATTTTTTCTTCTAAACTTCAATTTTGCATCATTATTGCATAAAATTTTCGAAACTGAATTCAATTTTTTTGTTATTTGCTAAAGAAATTATCGTTTC-TGATCAAATAGGAGGATTCGGAGGTTAGATTTCAGGCGTTTTCAGGTATGCATTTCTAGATTGTTGTATTTAGATTCACATTGCCGTAATTCTGTTTGTATTTGTGAATTTTCATTTGCCAATTTCTTAAATATCCATATTCTTGTTGTTGAATATTTCGCGTTGTGTATGTTATATAATATCTTCATCAGTATTTTCTAGGGTTCGCTCACTTATCATTGTAACTTGTGTAGATGTGTTTTGAACAGAACCAGAAATTTTGATAAGTAATTTCGTAAGGATCTACGAATTGTCTTGTTTTCTGGGTTTTTGTTAATGCATTTTTTTAATGTTAAATAATTCCTTTTTTTAATTTTTAAAAACTAGCATTTGGAACTAGTTTTGACTTTATAAGTTAACACTACTTGAGGGGACAAAGACCATCGATGAATCTGCTGCAATCTGAACTTCAGTAGTTGATGTGTGCTTACGGAAAAAGTAGCTCGGTGCTTTGTTCAAAACTGAAGTGATTAGGAACAAAACCAACATTATTTCTTTGATGTTCAGATGAGTATAAATATTCAAGTAATTCATGAGAATTCAAAGAACAGCTCTAGAATTCTAGAAACAGGTATTTGGTTATATTGGATCATCCAAAAATGCAGCTGGACACATGTCAGGTTCTCCGAAAATGGGTAACTTTTGGACGATCTGACATGCAAAGGATCTAAGCAAGTAATATGTTAGAAGAGAGCAGCATATGCCCTCACTTAAATGCTTCCATCACCACCTATAGATAGAGGTGGTCATTTTGAGTTATGATCAAGCAAGAAGTGAGCAATCAAGAAAGAACGTGTAAGAGAAAATGTGATAAATAAGAAAGAGCAACAATTAGAGCTGCTACAGTGTGAGCAAAGGGAAAAATTGCATTGAAAAGATTTATAAGACCGAAGTTGCTTTGTAGTTTGAAATGATAACATTCAAGTTGGGAGAAACTACTTGTATTCAACATTAAGATGCAGGGTTAAATGGAGGTTAAAAAGATCTTATAGATGGCAAAGGCAGGGTCAGCTTGGTCATGAAATTAGGTGGGGGAACCCAAAAAGGGCCCTTGGATATGGAGAAGGAAGCTAAAGGAAGTATATCTTCTGCTGATCTAGGAGGAATCTCAAATGTTGACAATTTGATTGTAATTTCATACAAAGGAAGGTTTTTCTTTATCATGCATCTCAAATGATAAGAAGGTTTTACATCTCATATCTGTACTAATTAATGATAAAGGGGACATAGAAGTAGTTTTGGACTTAATTTTACTGTGAGCCTACAACACCCTCATTACCCCCTATATAGATAAGAAGAGAGGGTAACTGTAAGAGTGTTAGTTTCCTTTTGATTCTCTCTCTCTCTATCACTTCTACTTATTTTTTTTGTTTCAAGCTTGTATTTCTACTTAATTAACTCAAACAAACTTTACAGCATAATTGGTGGCTAGTAGAAAATTATTGTCTATCTGTCATGGAGGTGGCTTCTTATATATTTCTGTTGTAAATTTTTGTTGTCTATATCAGGAGTCTAAAATTGTCCTGTGAATCTCTAATCAATTTCTTTCCACCAGAACACTATTTTCCAGTCTTGCTTTAAACATTTCCCTTTCAGCTATTTCAGATTCTAAACTGAAGTGAACAGAACATCCATTATGCTGGAATGACTTCAAGTACATAAGATCCTATGCATTGAGGATGAAGGGAGGTTTAAAGGTTCCACTGATCTCTCTCATCCTTATTGGATTTGTCTGCGCCAGTATTATTATTTTGGCATACGTGAAAAGCCCTTTTCTCTCTTATTGGACATCATCTCAAGACCGTGTCTTCCAGATTTCTCCAGGTTTGGCATAAATTCTCTTTTGACATTTTCCATACCATTGGTAATTCATTTTCCACTTTAAATTAGCAAATATGTTGACCCATTTGAAGATAAGGTAGTGTATATTAGGTCATAAAAGTTGCTGTTATTTGGCAGTTCAACCTTTTTATTTTTGTGAGAAAAAATCTCTTTGCATCTGTTTAGTGGTATGAAGCATTCTTTTACTGAGATGCAGTTACGAGCCAGTGGTTGCATAAAACTCAATACCACTGGAGCAGCCATTGTAGATAACACGTACCAGAACAAATCATGTCTAAATAAACAAAGGTGTTTTATTTACGCTGGATCACATTGCTGTATTCGAGTTGAGATGACATGAAACTTGGCAGAAGCTCTTTGTTGTGGATACCTCTCACCTGGTTGATCTGCTTGAATTATGCTAAAACATAAAGCTTCTTTTCTCAACTTTTTCCCAGTAAATTATGATATCATCTGTTTCTTCAACAACTTTAAGTAATAAGGCTACTAATCTAAATTCCCCACTTAGTGGATACGTCCCATTAAAGATCCTACCTTGACTTTTCTAGGTATTGAGAGTGGAATGTTTGGATTAGTTGTCTTATGCATTTTGGTGCATAAGTGTTCTAACATAATGTTTCAAATATAAAAAAGTTGAATATTAATCGATCGGATGTCATGTAGAGTTTGAAACAATAAAATATAGTATGATTTGACATCAATTTAAATGTTGGAGGGAGGAAAAAGCTTTCCTCTTTAAGGTACGTAGTTGTTTTGGGACAAACCAAAAAGTTAAATAGAACTTGATGGAAATGTTGCCAAATCCTATTGGAGCACTTATCTATTCTTTGTTTCTCTAGCAGATTATAAAGTGAAAGATGAAGAAGTTTTAAAAGAAAGAAATAGATCAGGGCAATCAGAAGAAAATGTGAACTTTGAATCTGCCATTTCACACTCTTCAATGAAGGATAAGGTGACTGAAGAACCAATTACTAATACTGAGATCGAAGGTACAGTATGTTCGAGTACTATCTTTCATTTTCCTGCGTGCCTCAAATCATGAAGAATTAGTGGTAATAGTACAGTAATGTGTCAGTTTTCTATCCTTCAAATGTGAACTTCCCTTTTCCTGAGTTGTATGAATAAAATAGCTCCTAATCTGCTTATTGTATTACTGAATCTGTTGCTTCCAGCTCCTCAACTTTTATTAATGCTTACCAAAGTGTGAGTTTTAGGGGGGGGGGGGGTTGCCCTTCTCCGAACCCTGCTAACTTGAGATGCTTTGTGCACCCGGTTCCTTTTTACAGTGTTATTTCTTTGCAGTAAAGAACTATTTTCACTGGTATCTATTCATGTTTTGTACTATCCTTGTACTCTGAGATACCATTGTGGTTAATCAATCACTAGTCTCCACAGCTTCATGTTTTTATGGTCCTTTTCAGGAAGTGTAGGTATTCCTCTCAACTTTACCCAAAAAGGAGGAGATTTAAAAGCCTTGGGAGAAAAAAATAGTTCAAG</genome_strand>
        <mrna_strand>CTCCAGCTATCTTCTTCATCTTCAAACTTAATATCTCTGAGTTGATTTTTTTCTTCTAAACTTCAATTTTGCATCATTATTGCATAAATATTTCGAAACTGAATTC-ATTTTTTT-TTATTTGCTAAAGAAATTATTGTTCCATGATCAAAT---TGGATTCGGAAGTTAGATTTCAGGCGTTTTCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTAAACTGAAGTGAACACAACATCCACTATGGTGGAATGACTTCAAGTACATAAGTTCCTATGAATTGAGGATGAAGGGAGGTTTAAAGGTTCCACTGATCTCTCTCATCCTTATTGGATTTGTCTGCGCCAGTGTTATTATTTTGGCATGCGTGAAAAGCCCCTTTCTCTCTTATTGGACACCATCTCAAGATCGTGTCTTCCAGATTTCTCCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATAAAGTGAAAGATGAAGAAGTTTTAAGAGAAAGAAATAGATCAGGGCAATCAGAAGAAAATGTGAACTTTGAATCTTCCATTTCGAACTCTTCTACGAAGGATAAGGTGACAGAAGAACCGATTAATAATACTGAGATTGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTGCAGCTATTCCTCCCAGCTTTACCCAAAAAGGAGGAGATTTAAAAGCTTTGGAAGAAAAAAATAGTTCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E423956" ref_strand="+" ref_description="SGN-E423956 [STM-42-H6]">
      <seq>attggttcttccttcttctccagctatcttcttcatcttcaaacttaatatctctgagttgatttttttcttctaaacttcaattttgcatcattattgcataaatatttcgaaactgaattcatttttttttatttgctaaagaaattattgttccatgatcaaattggattcggaagttagatttcaggcgttttcagatactaaactgaagtgaacacaacatccactatggtggaatgacttcaagtacataagttcctatgaattgaggatgaagggaggtttaaaggttccactgatctctctcatccttattggatttgtctgcgccagtgttattattttggcatgcgtgaaaagcccctttctctcttattggacaccatctcaagatcgtgtcttccagatttctccagattataaagtgaaagatgaagaagttttaagagaaagaaatagatcagggcaatcagaagaaaatgtgaactttgaatcttccatttcgaactcttctacgaanggataggtgacagaagaaccgattaataatactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="20167" stop="16550"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19867" g_stop="19666" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="200" r_length="200" r_score="0.896"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19665" i_stop="18067" i_length="1599">
            <donor d_prob="0.998" d_score="0.84"/>
            <acceptor a_prob="0.094" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18066" g_stop="17848" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="201" r_stop="419" r_length="219" r_score="0.950"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17847" i_stop="16988" i_length="860">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.870" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16987" g_stop="16850" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="557" r_length="138" r_score="0.906"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E423956" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>559</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E423956" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19867" e_stop="19666"/>
          <exon e_start="18066" e_stop="17848"/>
          <exon e_start="16987" e_stop="16850"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGGCTCTTCCTTCTTCTCCAGCTATCTTCTTCACCTTCAAACTTAGTAT-TCTGAGTT-AATTTTTTCTTCTAAACTTCAATTTTGCATCATTATTGCATAAAATTTTCGAAACTGAATTCAATTTTTTTGTTATTTGCTAAAGAAATTATCGTTTC-TGATCAAATAGGAGGATTCGGAGGTTAGATTTCAGGCGTTTTCAGGTATGCATTTCTAGATTGTTGTATTTAGATTCACATTGCCGTAATTCTGTTTGTATTTGTGAATTTTCATTTGCCAATTTCTTAAATATCCATATTCTTGTTGTTGAATATTTCGCGTTGTGTATGTTATATAATATCTTCATCAGTATTTTCTAGGGTTCGCTCACTTATCATTGTAACTTGTGTAGATGTGTTTTGAACAGAACCAGAAATTTTGATAAGTAATTTCGTAAGGATCTACGAATTGTCTTGTTTTCTGGGTTTTTGTTAATGCATTTTTTTAATGTTAAATAATTCCTTTTTTTAATTTTTAAAAACTAGCATTTGGAACTAGTTTTGACTTTATAAGTTAACACTACTTGAGGGGACAAAGACCATCGATGAATCTGCTGCAATCTGAACTTCAGTAGTTGATGTGTGCTTACGGAAAAAGTAGCTCGGTGCTTTGTTCAAAACTGAAGTGATTAGGAACAAAACCAACATTATTTCTTTGATGTTCAGATGAGTATAAATATTCAAGTAATTCATGAGAATTCAAAGAACAGCTCTAGAATTCTAGAAACAGGTATTTGGTTATATTGGATCATCCAAAAATGCAGCTGGACACATGTCAGGTTCTCCGAAAATGGGTAACTTTTGGACGATCTGACATGCAAAGGATCTAAGCAAGTAATATGTTAGAAGAGAGCAGCATATGCCCTCACTTAAATGCTTCCATCACCACCTATAGATAGAGGTGGTCATTTTGAGTTATGATCAAGCAAGAAGTGAGCAATCAAGAAAGAACGTGTAAGAGAAAATGTGATAAATAAGAAAGAGCAACAATTAGAGCTGCTACAGTGTGAGCAAAGGGAAAAATTGCATTGAAAAGATTTATAAGACCGAAGTTGCTTTGTAGTTTGAAATGATAACATTCAAGTTGGGAGAAACTACTTGTATTCAACATTAAGATGCAGGGTTAAATGGAGGTTAAAAAGATCTTATAGATGGCAAAGGCAGGGTCAGCTTGGTCATGAAATTAGGTGGGGGAACCCAAAAAGGGCCCTTGGATATGGAGAAGGAAGCTAAAGGAAGTATATCTTCTGCTGATCTAGGAGGAATCTCAAATGTTGACAATTTGATTGTAATTTCATACAAAGGAAGGTTTTTCTTTATCATGCATCTCAAATGATAAGAAGGTTTTACATCTCATATCTGTACTAATTAATGATAAAGGGGACATAGAAGTAGTTTTGGACTTAATTTTACTGTGAGCCTACAACACCCTCATTACCCCCTATATAGATAAGAAGAGAGGGTAACTGTAAGAGTGTTAGTTTCCTTTTGATTCTCTCTCTCTCTATCACTTCTACTTATTTTTTTTGTTTCAAGCTTGTATTTCTACTTAATTAACTCAAACAAACTTTACAGCATAATTGGTGGCTAGTAGAAAATTATTGTCTATCTGTCATGGAGGTGGCTTCTTATATATTTCTGTTGTAAATTTTTGTTGTCTATATCAGGAGTCTAAAATTGTCCTGTGAATCTCTAATCAATTTCTTTCCACCAGAACACTATTTTCCAGTCTTGCTTTAAACATTTCCCTTTCAGCTATTTCAGATTCTAAACTGAAGTGAACAGAACATCCATTATGCTGGAATGACTTCAAGTACATAAGATCCTATGCATTGAGGATGAAGGGAGGTTTAAAGGTTCCACTGATCTCTCTCATCCTTATTGGATTTGTCTGCGCCAGTATTATTATTTTGGCATACGTGAAAAGCCCTTTTCTCTCTTATTGGACATCATCTCAAGACCGTGTCTTCCAGATTTCTCCAGGTTTGGCATAAATTCTCTTTTGACATTTTCCATACCATTGGTAATTCATTTTCCACTTTAAATTAGCAAATATGTTGACCCATTTGAAGATAAGGTAGTGTATATTAGGTCATAAAAGTTGCTGTTATTTGGCAGTTCAACCTTTTTATTTTTGTGAGAAAAAATCTCTTTGCATCTGTTTAGTGGTATGAAGCATTCTTTTACTGAGATGCAGTTACGAGCCAGTGGTTGCATAAAACTCAATACCACTGGAGCAGCCATTGTAGATAACACGTACCAGAACAAATCATGTCTAAATAAACAAAGGTGTTTTATTTACGCTGGATCACATTGCTGTATTCGAGTTGAGATGACATGAAACTTGGCAGAAGCTCTTTGTTGTGGATACCTCTCACCTGGTTGATCTGCTTGAATTATGCTAAAACATAAAGCTTCTTTTCTCAACTTTTTCCCAGTAAATTATGATATCATCTGTTTCTTCAACAACTTTAAGTAATAAGGCTACTAATCTAAATTCCCCACTTAGTGGATACGTCCCATTAAAGATCCTACCTTGACTTTTCTAGGTATTGAGAGTGGAATGTTTGGATTAGTTGTCTTATGCATTTTGGTGCATAAGTGTTCTAACATAATGTTTCAAATATAAAAAAGTTGAATATTAATCGATCGGATGTCATGTAGAGTTTGAAACAATAAAATATAGTATGATTTGACATCAATTTAAATGTTGGAGGGAGGAAAAAGCTTTCCTCTTTAAGGTACGTAGTTGTTTTGGGACAAACCAAAAAGTTAAATAGAACTTGATGGAAATGTTGCCAAATCCTATTGGAGCACTTATCTATTCTTTGTTTCTCTAGCAGATTATAAAGTGAAAGATGAAGAAGTTTTAAAAGAAAGAAATAGATCAGGGCAATCAGAAGAAAATGTGAACTTTGAATCTGCCATTTCACACTCTTCAATGAAGGATAAGGTGACTGAAGAACCAATTACTAATACTG</genome_strand>
        <mrna_strand>ATTGGTTCTTCCTTCTTCTCCAGCTATCTTCTTCATCTTCAAACTTAATATCTCTGAGTTGATTTTTTTCTTCTAAACTTCAATTTTGCATCATTATTGCATAAATATTTCGAAACTGAATTC-ATTTTTTT-TTATTTGCTAAAGAAATTATTGTTCCATGATCAAAT---TGGATTCGGAAGTTAGATTTCAGGCGTTTTCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTAAACTGAAGTGAACACAACATCCACTATGGTGGAATGACTTCAAGTACATAAGTTCCTATGAATTGAGGATGAAGGGAGGTTTAAAGGTTCCACTGATCTCTCTCATCCTTATTGGATTTGTCTGCGCCAGTGTTATTATTTTGGCATGCGTGAAAAGCCCCTTTCTCTCTTATTGGACACCATCTCAAGATCGTGTCTTCCAGATTTCTCCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATAAAGTGAAAGATGAAGAAGTTTTAAGAGAAAGAAATAGATCAGGGCAATCAGAAGAAAATGTGAACTTTGAATCTTCCATTTCGAACTCTTCTACGAANGGATAGGTGACAGAAGAACCGATTAATAATACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E300092" ref_strand="+" ref_description="SGN-E300092 [cLEW-11-I2]">
      <seq>aaacttagtattctgagttaattttttcttctaaacttcaattttgcatcattattgcataaaattttcgaaactgaattcaatttttttgttatttgctaaagaaattatcgtttctgatcaaataggaggattcggaggttagatttcaggcgttttcagctatttcagattctaaactgaagtgaacagaacatccattatgctggaatgacttcaagtacataagatcctatgcattgaggatgaagggaggtttaaaggttccactgatctctctcatccttattggatttgtctgcgccagtattattattttggcatacgtgaaaagcccttttctctcttattggacatcatctcaagaccgtgtcttccagatttctccagcagattataaagtgaaagatgaagaagttttaaaagaaagaaatagatcagggcaatcagaagaaaatgtgaactttgaatctgccatttcacactcttcaatgaaggataaggtgactgaagaaccaattactaatactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="20127" stop="16550"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19827" g_stop="19666" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="162" r_length="162" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19665" i_stop="18076" i_length="1590">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.058" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18075" g_stop="17848" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="163" r_stop="390" r_length="228" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17847" i_stop="16991" i_length="857">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.286" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16990" g_stop="16850" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="391" r_stop="531" r_length="141" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E300092" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>531</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E300092" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19827" e_stop="19666"/>
          <exon e_start="18075" e_stop="17848"/>
          <exon e_start="16990" e_stop="16850"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACTTAGTATTCTGAGTTAATTTTTTCTTCTAAACTTCAATTTTGCATCATTATTGCATAAAATTTTCGAAACTGAATTCAATTTTTTTGTTATTTGCTAAAGAAATTATCGTTTCTGATCAAATAGGAGGATTCGGAGGTTAGATTTCAGGCGTTTTCAGGTATGCATTTCTAGATTGTTGTATTTAGATTCACATTGCCGTAATTCTGTTTGTATTTGTGAATTTTCATTTGCCAATTTCTTAAATATCCATATTCTTGTTGTTGAATATTTCGCGTTGTGTATGTTATATAATATCTTCATCAGTATTTTCTAGGGTTCGCTCACTTATCATTGTAACTTGTGTAGATGTGTTTTGAACAGAACCAGAAATTTTGATAAGTAATTTCGTAAGGATCTACGAATTGTCTTGTTTTCTGGGTTTTTGTTAATGCATTTTTTTAATGTTAAATAATTCCTTTTTTTAATTTTTAAAAACTAGCATTTGGAACTAGTTTTGACTTTATAAGTTAACACTACTTGAGGGGACAAAGACCATCGATGAATCTGCTGCAATCTGAACTTCAGTAGTTGATGTGTGCTTACGGAAAAAGTAGCTCGGTGCTTTGTTCAAAACTGAAGTGATTAGGAACAAAACCAACATTATTTCTTTGATGTTCAGATGAGTATAAATATTCAAGTAATTCATGAGAATTCAAAGAACAGCTCTAGAATTCTAGAAACAGGTATTTGGTTATATTGGATCATCCAAAAATGCAGCTGGACACATGTCAGGTTCTCCGAAAATGGGTAACTTTTGGACGATCTGACATGCAAAGGATCTAAGCAAGTAATATGTTAGAAGAGAGCAGCATATGCCCTCACTTAAATGCTTCCATCACCACCTATAGATAGAGGTGGTCATTTTGAGTTATGATCAAGCAAGAAGTGAGCAATCAAGAAAGAACGTGTAAGAGAAAATGTGATAAATAAGAAAGAGCAACAATTAGAGCTGCTACAGTGTGAGCAAAGGGAAAAATTGCATTGAAAAGATTTATAAGACCGAAGTTGCTTTGTAGTTTGAAATGATAACATTCAAGTTGGGAGAAACTACTTGTATTCAACATTAAGATGCAGGGTTAAATGGAGGTTAAAAAGATCTTATAGATGGCAAAGGCAGGGTCAGCTTGGTCATGAAATTAGGTGGGGGAACCCAAAAAGGGCCCTTGGATATGGAGAAGGAAGCTAAAGGAAGTATATCTTCTGCTGATCTAGGAGGAATCTCAAATGTTGACAATTTGATTGTAATTTCATACAAAGGAAGGTTTTTCTTTATCATGCATCTCAAATGATAAGAAGGTTTTACATCTCATATCTGTACTAATTAATGATAAAGGGGACATAGAAGTAGTTTTGGACTTAATTTTACTGTGAGCCTACAACACCCTCATTACCCCCTATATAGATAAGAAGAGAGGGTAACTGTAAGAGTGTTAGTTTCCTTTTGATTCTCTCTCTCTCTATCACTTCTACTTATTTTTTTTGTTTCAAGCTTGTATTTCTACTTAATTAACTCAAACAAACTTTACAGCATAATTGGTGGCTAGTAGAAAATTATTGTCTATCTGTCATGGAGGTGGCTTCTTATATATTTCTGTTGTAAATTTTTGTTGTCTATATCAGGAGTCTAAAATTGTCCTGTGAATCTCTAATCAATTTCTTTCCACCAGAACACTATTTTCCAGTCTTGCTTTAAACATTTCCCTTTCAGCTATTTCAGATTCTAAACTGAAGTGAACAGAACATCCATTATGCTGGAATGACTTCAAGTACATAAGATCCTATGCATTGAGGATGAAGGGAGGTTTAAAGGTTCCACTGATCTCTCTCATCCTTATTGGATTTGTCTGCGCCAGTATTATTATTTTGGCATACGTGAAAAGCCCTTTTCTCTCTTATTGGACATCATCTCAAGACCGTGTCTTCCAGATTTCTCCAGGTTTGGCATAAATTCTCTTTTGACATTTTCCATACCATTGGTAATTCATTTTCCACTTTAAATTAGCAAATATGTTGACCCATTTGAAGATAAGGTAGTGTATATTAGGTCATAAAAGTTGCTGTTATTTGGCAGTTCAACCTTTTTATTTTTGTGAGAAAAAATCTCTTTGCATCTGTTTAGTGGTATGAAGCATTCTTTTACTGAGATGCAGTTACGAGCCAGTGGTTGCATAAAACTCAATACCACTGGAGCAGCCATTGTAGATAACACGTACCAGAACAAATCATGTCTAAATAAACAAAGGTGTTTTATTTACGCTGGATCACATTGCTGTATTCGAGTTGAGATGACATGAAACTTGGCAGAAGCTCTTTGTTGTGGATACCTCTCACCTGGTTGATCTGCTTGAATTATGCTAAAACATAAAGCTTCTTTTCTCAACTTTTTCCCAGTAAATTATGATATCATCTGTTTCTTCAACAACTTTAAGTAATAAGGCTACTAATCTAAATTCCCCACTTAGTGGATACGTCCCATTAAAGATCCTACCTTGACTTTTCTAGGTATTGAGAGTGGAATGTTTGGATTAGTTGTCTTATGCATTTTGGTGCATAAGTGTTCTAACATAATGTTTCAAATATAAAAAAGTTGAATATTAATCGATCGGATGTCATGTAGAGTTTGAAACAATAAAATATAGTATGATTTGACATCAATTTAAATGTTGGAGGGAGGAAAAAGCTTTCCTCTTTAAGGTACGTAGTTGTTTTGGGACAAACCAAAAAGTTAAATAGAACTTGATGGAAATGTTGCCAAATCCTATTGGAGCACTTATCTATTCTTTGTTTCTCTAGCAGATTATAAAGTGAAAGATGAAGAAGTTTTAAAAGAAAGAAATAGATCAGGGCAATCAGAAGAAAATGTGAACTTTGAATCTGCCATTTCACACTCTTCAATGAAGGATAAGGTGACTGAAGAACCAATTACTAATACTG</genome_strand>
        <mrna_strand>AAACTTAGTATTCTGAGTTAATTTTTTCTTCTAAACTTCAATTTTGCATCATTATTGCATAAAATTTTCGAAACTGAATTCAATTTTTTTGTTATTTGCTAAAGAAATTATCGTTTCTGATCAAATAGGAGGATTCGGAGGTTAGATTTCAGGCGTTTTCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTTCAGATTCTAAACTGAAGTGAACAGAACATCCATTATGCTGGAATGACTTCAAGTACATAAGATCCTATGCATTGAGGATGAAGGGAGGTTTAAAGGTTCCACTGATCTCTCTCATCCTTATTGGATTTGTCTGCGCCAGTATTATTATTTTGGCATACGTGAAAAGCCCTTTTCTCTCTTATTGGACATCATCTCAAGACCGTGTCTTCCAGATTTCTCCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGATTATAAAGTGAAAGATGAAGAAGTTTTAAAAGAAAGAAATAGATCAGGGCAATCAGAAGAAAATGTGAACTTTGAATCTGCCATTTCACACTCTTCAATGAAGGATAAGGTGACTGAAGAACCAATTACTAATACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E303185" ref_strand="+" ref_description="SGN-E303185 [cLEX-5-J24]">
      <seq>tcctctctgtttctccattggctcttccttcttctccagctatcttcttcaccttcaaacttagtattctgagttaattttttcttctaaacttcaattttgcatcattattgcataaaattttcgaaactgaattcaatttttttgttatttgctaaagaaattatcgtttctgatcaaataggaggattcggaggttagatttcaggcgttttcagctatttcagattctaaactgaagtgaacagaacatccattatgctggaatgacttcaagtacataagatcctatgcattgaggatgaagggaggtttaaaggttccactgatctctctcatccttattggatttgtctgcgccagtattattattttggcatacgtgaaaagcccttttctctcttattggacatcatctcaagaccgtgtcttccagatttctccagattataaagtgaaagatgaagaagttttaaaagaaagaaatagatcagggcaatcagaagaaaatgtgaactttgaatctgccatttcacactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="20183" stop="16594"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19883" g_stop="19666" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="218" r_length="218" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19665" i_stop="18076" i_length="1590">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.058" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18075" g_stop="17848" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="446" r_length="228" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17847" i_stop="16988" i_length="860">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.870" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16987" g_stop="16894" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="447" r_stop="540" r_length="94" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E303185" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>540</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E303185" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19883" e_stop="19666"/>
          <exon e_start="18075" e_stop="17848"/>
          <exon e_start="16987" e_stop="16894"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTCTCTGTTTCTCCATTGGCTCTTCCTTCTTCTCCAGCTATCTTCTTCACCTTCAAACTTAGTATTCTGAGTTAATTTTTTCTTCTAAACTTCAATTTTGCATCATTATTGCATAAAATTTTCGAAACTGAATTCAATTTTTTTGTTATTTGCTAAAGAAATTATCGTTTCTGATCAAATAGGAGGATTCGGAGGTTAGATTTCAGGCGTTTTCAGGTATGCATTTCTAGATTGTTGTATTTAGATTCACATTGCCGTAATTCTGTTTGTATTTGTGAATTTTCATTTGCCAATTTCTTAAATATCCATATTCTTGTTGTTGAATATTTCGCGTTGTGTATGTTATATAATATCTTCATCAGTATTTTCTAGGGTTCGCTCACTTATCATTGTAACTTGTGTAGATGTGTTTTGAACAGAACCAGAAATTTTGATAAGTAATTTCGTAAGGATCTACGAATTGTCTTGTTTTCTGGGTTTTTGTTAATGCATTTTTTTAATGTTAAATAATTCCTTTTTTTAATTTTTAAAAACTAGCATTTGGAACTAGTTTTGACTTTATAAGTTAACACTACTTGAGGGGACAAAGACCATCGATGAATCTGCTGCAATCTGAACTTCAGTAGTTGATGTGTGCTTACGGAAAAAGTAGCTCGGTGCTTTGTTCAAAACTGAAGTGATTAGGAACAAAACCAACATTATTTCTTTGATGTTCAGATGAGTATAAATATTCAAGTAATTCATGAGAATTCAAAGAACAGCTCTAGAATTCTAGAAACAGGTATTTGGTTATATTGGATCATCCAAAAATGCAGCTGGACACATGTCAGGTTCTCCGAAAATGGGTAACTTTTGGACGATCTGACATGCAAAGGATCTAAGCAAGTAATATGTTAGAAGAGAGCAGCATATGCCCTCACTTAAATGCTTCCATCACCACCTATAGATAGAGGTGGTCATTTTGAGTTATGATCAAGCAAGAAGTGAGCAATCAAGAAAGAACGTGTAAGAGAAAATGTGATAAATAAGAAAGAGCAACAATTAGAGCTGCTACAGTGTGAGCAAAGGGAAAAATTGCATTGAAAAGATTTATAAGACCGAAGTTGCTTTGTAGTTTGAAATGATAACATTCAAGTTGGGAGAAACTACTTGTATTCAACATTAAGATGCAGGGTTAAATGGAGGTTAAAAAGATCTTATAGATGGCAAAGGCAGGGTCAGCTTGGTCATGAAATTAGGTGGGGGAACCCAAAAAGGGCCCTTGGATATGGAGAAGGAAGCTAAAGGAAGTATATCTTCTGCTGATCTAGGAGGAATCTCAAATGTTGACAATTTGATTGTAATTTCATACAAAGGAAGGTTTTTCTTTATCATGCATCTCAAATGATAAGAAGGTTTTACATCTCATATCTGTACTAATTAATGATAAAGGGGACATAGAAGTAGTTTTGGACTTAATTTTACTGTGAGCCTACAACACCCTCATTACCCCCTATATAGATAAGAAGAGAGGGTAACTGTAAGAGTGTTAGTTTCCTTTTGATTCTCTCTCTCTCTATCACTTCTACTTATTTTTTTTGTTTCAAGCTTGTATTTCTACTTAATTAACTCAAACAAACTTTACAGCATAATTGGTGGCTAGTAGAAAATTATTGTCTATCTGTCATGGAGGTGGCTTCTTATATATTTCTGTTGTAAATTTTTGTTGTCTATATCAGGAGTCTAAAATTGTCCTGTGAATCTCTAATCAATTTCTTTCCACCAGAACACTATTTTCCAGTCTTGCTTTAAACATTTCCCTTTCAGCTATTTCAGATTCTAAACTGAAGTGAACAGAACATCCATTATGCTGGAATGACTTCAAGTACATAAGATCCTATGCATTGAGGATGAAGGGAGGTTTAAAGGTTCCACTGATCTCTCTCATCCTTATTGGATTTGTCTGCGCCAGTATTATTATTTTGGCATACGTGAAAAGCCCTTTTCTCTCTTATTGGACATCATCTCAAGACCGTGTCTTCCAGATTTCTCCAGGTTTGGCATAAATTCTCTTTTGACATTTTCCATACCATTGGTAATTCATTTTCCACTTTAAATTAGCAAATATGTTGACCCATTTGAAGATAAGGTAGTGTATATTAGGTCATAAAAGTTGCTGTTATTTGGCAGTTCAACCTTTTTATTTTTGTGAGAAAAAATCTCTTTGCATCTGTTTAGTGGTATGAAGCATTCTTTTACTGAGATGCAGTTACGAGCCAGTGGTTGCATAAAACTCAATACCACTGGAGCAGCCATTGTAGATAACACGTACCAGAACAAATCATGTCTAAATAAACAAAGGTGTTTTATTTACGCTGGATCACATTGCTGTATTCGAGTTGAGATGACATGAAACTTGGCAGAAGCTCTTTGTTGTGGATACCTCTCACCTGGTTGATCTGCTTGAATTATGCTAAAACATAAAGCTTCTTTTCTCAACTTTTTCCCAGTAAATTATGATATCATCTGTTTCTTCAACAACTTTAAGTAATAAGGCTACTAATCTAAATTCCCCACTTAGTGGATACGTCCCATTAAAGATCCTACCTTGACTTTTCTAGGTATTGAGAGTGGAATGTTTGGATTAGTTGTCTTATGCATTTTGGTGCATAAGTGTTCTAACATAATGTTTCAAATATAAAAAAGTTGAATATTAATCGATCGGATGTCATGTAGAGTTTGAAACAATAAAATATAGTATGATTTGACATCAATTTAAATGTTGGAGGGAGGAAAAAGCTTTCCTCTTTAAGGTACGTAGTTGTTTTGGGACAAACCAAAAAGTTAAATAGAACTTGATGGAAATGTTGCCAAATCCTATTGGAGCACTTATCTATTCTTTGTTTCTCTAGCAGATTATAAAGTGAAAGATGAAGAAGTTTTAAAAGAAAGAAATAGATCAGGGCAATCAGAAGAAAATGTGAACTTTGAATCTGCCATTTCACACTC</genome_strand>
        <mrna_strand>TCCTCTCTGTTTCTCCATTGGCTCTTCCTTCTTCTCCAGCTATCTTCTTCACCTTCAAACTTAGTATTCTGAGTTAATTTTTTCTTCTAAACTTCAATTTTGCATCATTATTGCATAAAATTTTCGAAACTGAATTCAATTTTTTTGTTATTTGCTAAAGAAATTATCGTTTCTGATCAAATAGGAGGATTCGGAGGTTAGATTTCAGGCGTTTTCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTTCAGATTCTAAACTGAAGTGAACAGAACATCCATTATGCTGGAATGACTTCAAGTACATAAGATCCTATGCATTGAGGATGAAGGGAGGTTTAAAGGTTCCACTGATCTCTCTCATCCTTATTGGATTTGTCTGCGCCAGTATTATTATTTTGGCATACGTGAAAAGCCCTTTTCTCTCTTATTGGACATCATCTCAAGACCGTGTCTTCCAGATTTCTCCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATAAAGTGAAAGATGAAGAAGTTTTAAAAGAAAGAAATAGATCAGGGCAATCAGAAGAAAATGTGAACTTTGAATCTGCCATTTCACACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E307266" ref_strand="+" ref_description="SGN-E307266 [cLEY-12-C4]">
      <seq>ttggctcttccttcttctccagctatcttcttcaccttcaaacttagtattctgagttaattttttcttctaaacttcaattttgcatcattattgcataaaattttcgaaactgaattcaatttttttgttatttgctaaagaaattatcgtttctgatcaaataggaggattcggaggttagatttcaggcgttttcagctatttcagattctaaactgaagtgaacagaacatccattatgctggaatgacttcaagtacataagatcctatgcattgaggatgaagggaggtttaaaggttccactgatctctctcatccttattggatttgtctgcgccagtattattattttggcatacgtgaaaagcccttttctctcttattggacatcatctcaagaccgtgtcttccagatttctccagcagattataaagtgaaagatgaagaagttttaaaagaaagaaatagatcagggcaatcagaagaaaatgtgaactttgaatctgccatttcacact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="20166" stop="16595"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19866" g_stop="19666" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="201" r_length="201" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19665" i_stop="18076" i_length="1590">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.058" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18075" g_stop="17848" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="202" r_stop="429" r_length="228" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17847" i_stop="16991" i_length="857">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.286" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16990" g_stop="16895" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="430" r_stop="525" r_length="96" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E307266" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>525</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E307266" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19866" e_stop="19666"/>
          <exon e_start="18075" e_stop="17848"/>
          <exon e_start="16990" e_stop="16895"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGCTCTTCCTTCTTCTCCAGCTATCTTCTTCACCTTCAAACTTAGTATTCTGAGTTAATTTTTTCTTCTAAACTTCAATTTTGCATCATTATTGCATAAAATTTTCGAAACTGAATTCAATTTTTTTGTTATTTGCTAAAGAAATTATCGTTTCTGATCAAATAGGAGGATTCGGAGGTTAGATTTCAGGCGTTTTCAGGTATGCATTTCTAGATTGTTGTATTTAGATTCACATTGCCGTAATTCTGTTTGTATTTGTGAATTTTCATTTGCCAATTTCTTAAATATCCATATTCTTGTTGTTGAATATTTCGCGTTGTGTATGTTATATAATATCTTCATCAGTATTTTCTAGGGTTCGCTCACTTATCATTGTAACTTGTGTAGATGTGTTTTGAACAGAACCAGAAATTTTGATAAGTAATTTCGTAAGGATCTACGAATTGTCTTGTTTTCTGGGTTTTTGTTAATGCATTTTTTTAATGTTAAATAATTCCTTTTTTTAATTTTTAAAAACTAGCATTTGGAACTAGTTTTGACTTTATAAGTTAACACTACTTGAGGGGACAAAGACCATCGATGAATCTGCTGCAATCTGAACTTCAGTAGTTGATGTGTGCTTACGGAAAAAGTAGCTCGGTGCTTTGTTCAAAACTGAAGTGATTAGGAACAAAACCAACATTATTTCTTTGATGTTCAGATGAGTATAAATATTCAAGTAATTCATGAGAATTCAAAGAACAGCTCTAGAATTCTAGAAACAGGTATTTGGTTATATTGGATCATCCAAAAATGCAGCTGGACACATGTCAGGTTCTCCGAAAATGGGTAACTTTTGGACGATCTGACATGCAAAGGATCTAAGCAAGTAATATGTTAGAAGAGAGCAGCATATGCCCTCACTTAAATGCTTCCATCACCACCTATAGATAGAGGTGGTCATTTTGAGTTATGATCAAGCAAGAAGTGAGCAATCAAGAAAGAACGTGTAAGAGAAAATGTGATAAATAAGAAAGAGCAACAATTAGAGCTGCTACAGTGTGAGCAAAGGGAAAAATTGCATTGAAAAGATTTATAAGACCGAAGTTGCTTTGTAGTTTGAAATGATAACATTCAAGTTGGGAGAAACTACTTGTATTCAACATTAAGATGCAGGGTTAAATGGAGGTTAAAAAGATCTTATAGATGGCAAAGGCAGGGTCAGCTTGGTCATGAAATTAGGTGGGGGAACCCAAAAAGGGCCCTTGGATATGGAGAAGGAAGCTAAAGGAAGTATATCTTCTGCTGATCTAGGAGGAATCTCAAATGTTGACAATTTGATTGTAATTTCATACAAAGGAAGGTTTTTCTTTATCATGCATCTCAAATGATAAGAAGGTTTTACATCTCATATCTGTACTAATTAATGATAAAGGGGACATAGAAGTAGTTTTGGACTTAATTTTACTGTGAGCCTACAACACCCTCATTACCCCCTATATAGATAAGAAGAGAGGGTAACTGTAAGAGTGTTAGTTTCCTTTTGATTCTCTCTCTCTCTATCACTTCTACTTATTTTTTTTGTTTCAAGCTTGTATTTCTACTTAATTAACTCAAACAAACTTTACAGCATAATTGGTGGCTAGTAGAAAATTATTGTCTATCTGTCATGGAGGTGGCTTCTTATATATTTCTGTTGTAAATTTTTGTTGTCTATATCAGGAGTCTAAAATTGTCCTGTGAATCTCTAATCAATTTCTTTCCACCAGAACACTATTTTCCAGTCTTGCTTTAAACATTTCCCTTTCAGCTATTTCAGATTCTAAACTGAAGTGAACAGAACATCCATTATGCTGGAATGACTTCAAGTACATAAGATCCTATGCATTGAGGATGAAGGGAGGTTTAAAGGTTCCACTGATCTCTCTCATCCTTATTGGATTTGTCTGCGCCAGTATTATTATTTTGGCATACGTGAAAAGCCCTTTTCTCTCTTATTGGACATCATCTCAAGACCGTGTCTTCCAGATTTCTCCAGGTTTGGCATAAATTCTCTTTTGACATTTTCCATACCATTGGTAATTCATTTTCCACTTTAAATTAGCAAATATGTTGACCCATTTGAAGATAAGGTAGTGTATATTAGGTCATAAAAGTTGCTGTTATTTGGCAGTTCAACCTTTTTATTTTTGTGAGAAAAAATCTCTTTGCATCTGTTTAGTGGTATGAAGCATTCTTTTACTGAGATGCAGTTACGAGCCAGTGGTTGCATAAAACTCAATACCACTGGAGCAGCCATTGTAGATAACACGTACCAGAACAAATCATGTCTAAATAAACAAAGGTGTTTTATTTACGCTGGATCACATTGCTGTATTCGAGTTGAGATGACATGAAACTTGGCAGAAGCTCTTTGTTGTGGATACCTCTCACCTGGTTGATCTGCTTGAATTATGCTAAAACATAAAGCTTCTTTTCTCAACTTTTTCCCAGTAAATTATGATATCATCTGTTTCTTCAACAACTTTAAGTAATAAGGCTACTAATCTAAATTCCCCACTTAGTGGATACGTCCCATTAAAGATCCTACCTTGACTTTTCTAGGTATTGAGAGTGGAATGTTTGGATTAGTTGTCTTATGCATTTTGGTGCATAAGTGTTCTAACATAATGTTTCAAATATAAAAAAGTTGAATATTAATCGATCGGATGTCATGTAGAGTTTGAAACAATAAAATATAGTATGATTTGACATCAATTTAAATGTTGGAGGGAGGAAAAAGCTTTCCTCTTTAAGGTACGTAGTTGTTTTGGGACAAACCAAAAAGTTAAATAGAACTTGATGGAAATGTTGCCAAATCCTATTGGAGCACTTATCTATTCTTTGTTTCTCTAGCAGATTATAAAGTGAAAGATGAAGAAGTTTTAAAAGAAAGAAATAGATCAGGGCAATCAGAAGAAAATGTGAACTTTGAATCTGCCATTTCACACT</genome_strand>
        <mrna_strand>TTGGCTCTTCCTTCTTCTCCAGCTATCTTCTTCACCTTCAAACTTAGTATTCTGAGTTAATTTTTTCTTCTAAACTTCAATTTTGCATCATTATTGCATAAAATTTTCGAAACTGAATTCAATTTTTTTGTTATTTGCTAAAGAAATTATCGTTTCTGATCAAATAGGAGGATTCGGAGGTTAGATTTCAGGCGTTTTCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTTCAGATTCTAAACTGAAGTGAACAGAACATCCATTATGCTGGAATGACTTCAAGTACATAAGATCCTATGCATTGAGGATGAAGGGAGGTTTAAAGGTTCCACTGATCTCTCTCATCCTTATTGGATTTGTCTGCGCCAGTATTATTATTTTGGCATACGTGAAAAGCCCTTTTCTCTCTTATTGGACATCATCTCAAGACCGTGTCTTCCAGATTTCTCCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGATTATAAAGTGAAAGATGAAGAAGTTTTAAAAGAAAGAAATAGATCAGGGCAATCAGAAGAAAATGTGAACTTTGAATCTGCCATTTCACACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E307267" ref_strand="+" ref_description="SGN-E307267 [cLEY-12-C6]">
      <seq>gctatcttcttcaccttcaaacttagtattccgaggtaattttttctactaaacttcaattttgcatcattattgcataaaattttcgaaactgaattcaatgttttcgctatccgctaaagaaattatcgtttcctgatcaaataggaggattcggaggttagatctcaggcgttgtcagctatttcagattctaaactgaagcgaacagaacatccattatgctggaatgacttcccacacataagatcctatgccttgaggatgaacggaggtttaaaggttccactgatctctctcatcctta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="20145" stop="17650"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19845" g_stop="19666" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="181" r_length="181" r_score="0.933"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19665" i_stop="18076" i_length="1590">
            <donor d_prob="0.998" d_score="0.92"/>
            <acceptor a_prob="0.058" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18075" g_stop="17950" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="307" r_length="126" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E307267" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>306</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E307267" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19845" e_stop="19666"/>
          <exon e_start="18075" e_stop="17950"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTATCTTCTTCACCTTCAAACTTAGTATTCTGAGTTAATTTTTTCTTCTAAACTTCAATTTTGCATCATTATTGCATAAAATTTTCGAAACTGAATTCAATTTTTTTGTTATTTGCTAAAGAAATTATCGTTT-CTGATCAAATAGGAGGATTCGGAGGTTAGATTTCAGGCGTTTTCAGGTATGCATTTCTAGATTGTTGTATTTAGATTCACATTGCCGTAATTCTGTTTGTATTTGTGAATTTTCATTTGCCAATTTCTTAAATATCCATATTCTTGTTGTTGAATATTTCGCGTTGTGTATGTTATATAATATCTTCATCAGTATTTTCTAGGGTTCGCTCACTTATCATTGTAACTTGTGTAGATGTGTTTTGAACAGAACCAGAAATTTTGATAAGTAATTTCGTAAGGATCTACGAATTGTCTTGTTTTCTGGGTTTTTGTTAATGCATTTTTTTAATGTTAAATAATTCCTTTTTTTAATTTTTAAAAACTAGCATTTGGAACTAGTTTTGACTTTATAAGTTAACACTACTTGAGGGGACAAAGACCATCGATGAATCTGCTGCAATCTGAACTTCAGTAGTTGATGTGTGCTTACGGAAAAAGTAGCTCGGTGCTTTGTTCAAAACTGAAGTGATTAGGAACAAAACCAACATTATTTCTTTGATGTTCAGATGAGTATAAATATTCAAGTAATTCATGAGAATTCAAAGAACAGCTCTAGAATTCTAGAAACAGGTATTTGGTTATATTGGATCATCCAAAAATGCAGCTGGACACATGTCAGGTTCTCCGAAAATGGGTAACTTTTGGACGATCTGACATGCAAAGGATCTAAGCAAGTAATATGTTAGAAGAGAGCAGCATATGCCCTCACTTAAATGCTTCCATCACCACCTATAGATAGAGGTGGTCATTTTGAGTTATGATCAAGCAAGAAGTGAGCAATCAAGAAAGAACGTGTAAGAGAAAATGTGATAAATAAGAAAGAGCAACAATTAGAGCTGCTACAGTGTGAGCAAAGGGAAAAATTGCATTGAAAAGATTTATAAGACCGAAGTTGCTTTGTAGTTTGAAATGATAACATTCAAGTTGGGAGAAACTACTTGTATTCAACATTAAGATGCAGGGTTAAATGGAGGTTAAAAAGATCTTATAGATGGCAAAGGCAGGGTCAGCTTGGTCATGAAATTAGGTGGGGGAACCCAAAAAGGGCCCTTGGATATGGAGAAGGAAGCTAAAGGAAGTATATCTTCTGCTGATCTAGGAGGAATCTCAAATGTTGACAATTTGATTGTAATTTCATACAAAGGAAGGTTTTTCTTTATCATGCATCTCAAATGATAAGAAGGTTTTACATCTCATATCTGTACTAATTAATGATAAAGGGGACATAGAAGTAGTTTTGGACTTAATTTTACTGTGAGCCTACAACACCCTCATTACCCCCTATATAGATAAGAAGAGAGGGTAACTGTAAGAGTGTTAGTTTCCTTTTGATTCTCTCTCTCTCTATCACTTCTACTTATTTTTTTTGTTTCAAGCTTGTATTTCTACTTAATTAACTCAAACAAACTTTACAGCATAATTGGTGGCTAGTAGAAAATTATTGTCTATCTGTCATGGAGGTGGCTTCTTATATATTTCTGTTGTAAATTTTTGTTGTCTATATCAGGAGTCTAAAATTGTCCTGTGAATCTCTAATCAATTTCTTTCCACCAGAACACTATTTTCCAGTCTTGCTTTAAACATTTCCCTTTCAGCTATTTCAGATTCTAAACTGAAGTGAACAGAACATCCATTATGCTGGAATGACTTCAAGTACATAAGATCCTATGCATTGAGGATGAAGGGAGGTTTAAAGGTTCCACTGATCTCTCTCATCCTTA</genome_strand>
        <mrna_strand>GCTATCTTCTTCACCTTCAAACTTAGTATTCCGAGGTAATTTTTTCTACTAAACTTCAATTTTGCATCATTATTGCATAAAATTTTCGAAACTGAATTCAATGTTTTCGCTATCCGCTAAAGAAATTATCGTTTCCTGATCAAATAGGAGGATTCGGAGGTTAGATCTCAGGCGTTGTCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTTCAGATTCTAAACTGAAGCGAACAGAACATCCATTATGCTGGAATGACTTCCCACACATAAGATCCTATGCCTTGAGGATGAACGGAGGTTTAAAGGTTCCACTGATCTCTCTCATCCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E582660" ref_strand="+" ref_description="SGN-E582660 [8293]">
      <seq>aaccaattgaggataccaaacaagcgctttgtacggccttgtcaaagcttgattctcaagatctgtttaatataatagctttcaacagcgaaaaatatctattttcatcatcactcgagttggcaaccaagaagtctattgaaaacgcaactcagtggattggaacaaattttattgctggtggtggcacaaatattttgaatccattgactcaggccatggagatgttttcgtatacccagcaacacattccgattattttcctggtcactgatggagctgttgaagacgaaagacacatctgtaatgttctgaagagtcatctgatgcaaaaacaaatgatatgcccacggctttacacatttggcataggattgttctgcaaccattactttctccgcatgcttgcagtgatgagtcgtggccactataatgctgcttatgatgttgattccattgaagttcgcatggaacaactgttctccagggcatcatctgtcattcttgcgaatattgcctttgagaaccttgatggtcttgaagaattgaggtctttcccactccagttcagacctttcatcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="29507" stop="27151"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29207" g_stop="28993" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="215" r_length="215" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28992" i_stop="28411" i_length="582">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.946" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28410" g_stop="28254" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="372" r_length="157" r_score="0.955"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28253" i_stop="27870" i_length="384">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.977" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27869" g_stop="27792" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="373" r_stop="450" r_length="78" r_score="0.987"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27791" i_stop="27554" i_length="238">
            <donor d_prob="0.885" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27553" g_stop="27453" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="451" r_stop="550" r_length="100" r_score="0.941"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27452" i_stop="27195" i_length="258">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.935" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27194" g_stop="27162" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="551" r_stop="582" r_length="32" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E582660" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>584</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E582660" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29207" e_stop="28993"/>
          <exon e_start="28410" e_stop="28254"/>
          <exon e_start="27869" e_stop="27792"/>
          <exon e_start="27553" e_stop="27453"/>
          <exon e_start="27194" e_stop="27162"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACCAATTGAGGATACCAAACAAGCTCTTTGTATGGCGTTGTCAAAGCTTGATTCTCAAGATCTGTTCAATATAATAGCTTTCAACAACGAAAAATATCTATTTTCATCATCACTCGAGTTGGCAACCAAGAAGGCTATTGAAAACGCAACTCAGTGGATTGGAACGAATTTTATTGCTGGTGGTGGCACAAATATTTTGAATCCATTGACTCAGGTCACATACCCCTTTTTTTAGATAACTGTCTCAGTTATATTATTTTTTTTCATCTATTTAGTTAGTTGCAAACTTTATTTTTTGTATGTTAATCGTCTCATCTATTGATTCGGGAGTAGATGATCTATATCTCAGATAGTATCAAGCTTCTATTTTTTGTGAAAAACATGAAGAATGAAAAGAAAATATATCAGTGGTCACATTTTGGTCCACCATTTTTAGATGTTCACGGTCAATCATCCTCTCTCAGTGTGTGAGATGCTACTTAGTGACACTGGTTTCATCCCAAAAATATCTTTAGGACACTTGAGGGTCTAGTTGTTAGTTGAATATCATTTGTTGAGCATTTGGAAAGGAGTTACTAATATCCTTTTTTCTTTTCCACAAGTAGATAAATGAAAAAAAAAACATGTGGTCAATCTCTTAAAAGAAGTGTTAACAACAACGTACATTCATCCTCGCCGCTTACTATTTTATTCCTAGAATGTTGAGTTCATGATATTGAAGTCCTACTGAATTCATAGATTTTTATCCTACCTGTATTTTCTGTCAAATCTAACACAAAACTTTTACCTTTATCAGGCCATGGAGATGTTTTCCTATACCCAGCAACACATTCCAATGATTTTCCTGGTCACTGATGGAGCTGTTGAAGATGAAAGACACATCTGTGATGTTCTGAAGAGTCATCTGATGCAAAAACAAATGATATGCCCGCGGCTTTACGCATTTGGCATAGGTATGCATCTGGAAGAAGCATCGCCCCTCCAAAGCTCCCCCTCTCATTCCCACCCGTAAGGAAAGTATTTTGGTAGAGGAGATGCATTAATCTCCGATTTTAACCTGACTAATATTTGCTCAAAAATCTTGCTAATCTACGTAATGATGTTTTTCATTTCATCACATTCTGTATGCGTCCAAGTTCGATAAGAACTTGTTTTAGTAGGTTGTGTGAATTTTTTGAGAATGTATCCCATTAGACACCGAAATTATGATGGTCTTATATTTTGGGAGATCACATCATCTTATTTTTTACCTAGATTCTAGGGATCTGAATCGAATCATTTGTCTTTTGCCGTAGATTTGTGCTTTTAATAACCTATTCTACCATGACTAATTTCAGGATTGTTCTGCAACCATTACTTTCTCCGCATGCTTGCAATGATGAGTCGTGGCCACTATAATGCTGCTTATGATGTTGGTAAGTTTAGTGATTCTGCAACTCATACAACAAGGTTGAAAGATGGCATTATAGTTATTATTTTTCGTTTCAAGGATTGAAATACTAATTTGATTTGCTTCAAGATAAATTACTTTTTGATCTGGACATACTCAACTTGATATAATGTTACATATAATTTCCTGTATTTTCTCGTGACTAACTGTAAGCAGTTGTTGATTGTAGTTGCCTTCTCATTATGTTTGGTGGTCTTGTACAGATTCTATTGAAGTTCGCGTTGAACAGCTGTTCTCCAGGGCATCATCTGTCATTCTTGCGGATATTGCCTTTGAGAACCTTGATGGTCTTGAAGAATTTGAGGTAGGCATGTGAGGATATTTGTTCTTTTATTCTTAGCTCTTTGATGGATCACAATTATGATAGTGCTGCTAACATTTAAATAATAACAAATCTAATCAGTCCTACCTCATTTTTGAAGAATTGGCTATTCCCTACACATAATATGGATACGACTTTAGTATGATCTGCATGCTTTATTATTATATGTTGTCGAAGTTTCGTGTTGTTTCCTACATGAATTCATGCTTCCTAAGGAAACTACCCTTAAATTTTCAATAGGTCTTTCCAACTCCAGTTCCAGACCTTTCATCC</genome_strand>
        <mrna_strand>AACCAATTGAGGATACCAAACAAGCGCTTTGTACGGCCTTGTCAAAGCTTGATTCTCAAGATCTGTTTAATATAATAGCTTTCAACAGCGAAAAATATCTATTTTCATCATCACTCGAGTTGGCAACCAAGAAGTCTATTGAAAACGCAACTCAGTGGATTGGAACAAATTTTATTGCTGGTGGTGGCACAAATATTTTGAATCCATTGACTCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATGGAGATGTTTTCGTATACCCAGCAACACATTCCGATTATTTTCCTGGTCACTGATGGAGCTGTTGAAGACGAAAGACACATCTGTAATGTTCTGAAGAGTCATCTGATGCAAAAACAAATGATATGCCCACGGCTTTACACATTTGGCATAG................................................................................................................................................................................................................................................................................................................................................................................................GATTGTTCTGCAACCATTACTTTCTCCGCATGCTTGCAGTGATGAGTCGTGGCCACTATAATGCTGCTTATGATGTTG..............................................................................................................................................................................................................................................ATTCCATTGAAGTTCGCATGGAACAACTGTTCTCCAGGGCATCATCTGTCATTCTTGCGAATATTGCCTTTGAGAACCTTGATGGTCTTGAAGAA-TTGAG..................................................................................................................................................................................................................................................................GTCTTTCCCACTCCAGTT-CAGACCTTTCATCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E242359" ref_strand="-" ref_description="SGN-E242359 [cLEE-3-K21]">
      <seq>agtatgtattaagcaatatcataaaattaactaatatccttagcatgcagcatttgcaattaccataacccttggttgcatcaccaagcacatcaatgaggactcacacctcctcatcatacttatttgggaatttagttcattggattgcatatattaacatatttcaagattcatcatatttattcccctcgtgtccttacgtgacactccactcctcaatatactatcctggcaccggaacgtggcacccgatccatattctatcctggtgtcagaacgtgacacccgatccatattctatcctggtgtcggaacgtgacacccgatccatattctatcctggtaccggaacgtggcacccgatccatattctatcctggtgtcggaacgtgacacccgatccatattctatcctggtaccggaacgtggcacccgatcccctaatctcaccactttcgttcatcaagccttcttttataccaaggcatcattattaacaaagtagattagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="67474" stop="59274"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67174" g_stop="66887" g_length="288"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="288" r_length="288" r_score="0.927"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66886" i_stop="66769" i_length="118">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66768" g_stop="66702" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="355" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66701" i_stop="59734" i_length="6968">
            <donor d_prob="0.132" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="59733" g_stop="59574" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="356" r_stop="515" r_length="160" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E242359" ref_strand="-">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>515</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E242359" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="67174" e_stop="66887"/>
          <exon e_start="66768" e_stop="66702"/>
          <exon e_start="59733" e_stop="59574"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTATGTATTAAGCAATATCATAAAATCAACTAATATCCTTAACATGCAGCATTTATAGTTACCATAACCCTTGGTTACAACACCAAGCACATCAATGAGGACTCACACCACCTCATCATACTCATTTGGGAATTTAGTTCATTAGATTGGATATATTATCATATTTCAAGATTCATTATCTTTATTCCCCTCGTGTCGGTACGTGACACTCCGCTCCTCAATATACTATCCTGGTACCAGAACGTGGCACCCGATCCATATTTTATCCTGGTGTCGGAACGTGACACTCCAATCCTCATATACTATCCTGGTACCGGAACGTGGCACCCGATCCATATATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTACCGGAACGTGGCACCCGATCCATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTACCGGAACGTGACACCCGATCCCCTAATCTCACTACTTTCATTCATCAAGCCTTCTTTCATACCAAGGCATCATCATTATCAAAGTAGATTAGGGTTTCTTTTCAAGATTTGGGATTCAATAGCTTCATCATGCTTGTTTATTCATAATTACATAATCACATCATTCATGCAAGCATACAATTAAGCATATAGAAGGGTTTACAATACTACTAACACATATCATTCACTATTAAGAGTTTACTACGAATAGCATGAAATAACCATAACCTACCTCCACCAAAGAATTGAAATCAACAAGCTATCTTCTCAGAATCCTTGCTATCCTCTTCGTTTCTCTCTCTTTCTACTCGTTCTCTTTCTTTTTCTGTCTCTTTTTGTTCTTTCTTATTTTTCTTATTCAAACCCTCTTTCTTTTACCCTAATTAGTTATTATTAAGAATAAAAGATGGCGATAATACCCCACTAATTAACTTAGGGTTACCTCTTTTAACCCCCAAGAATTTGAGTTATTAATATAAACCCACGAAATCTATAATTAAGGAAAGAATAGTCCAAAAACGTCCCTTAAAACGTGTAAGGAAATCCGATTCTGCTTGGGATTTGCGCAACCTGTGACGGGCCATCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGCAAAGTTCAGAGAGTGGATTCTCACTGAAGTCTCCATGACGGTCCGTCACGCCCGTGACGGTCCGTCCTGCCATTCCGTCACGAAGTTCAGAGAGTCGATTTTCAGTACCCAATTTTAGATTTTCTAAGTGTTTTGAAACGAGACCCTGCGACGGTCCATCGTGCCCTTGACGGTCCGTCGTGGGGTCCGTCGCTTCTGCCAGTTTTTCCAGAATTGAAGTCTGTTGCTCAAGACGACTAAACGGATCGTTACATTAGATACCAATTTACCCATTGTTCGTCCCCGAACTATCAAAAGAAGGAAAACAAGGGCGAAAAGGAGTACCTGAATCTGTAAACAGATGTGGGTATTTTTCTTGCATATCCGCCTCCTTCTCCCAAGTGGCTTCTTCAACCGGTCGATTCTTCCATTGCACCTTGATGGACGCAATCTCTCTTGACCTCAACTTGCGAAATTCTCTATCTAAAATAGCAACAGGCTCCTCCTCATAAGACAAGTTCTCATCAAGCAAAACTGAATCCTATCGGATAATGTAATTCCCATCCTCATGGTATCTTTTCAACATCGACACATGGAATACCGGGTGTACTCCGGACAGCCCTGGAGGCAAGGCTAACTCATAAGCCACCTCTCCTACTCACTTAAATACTTCAAATGGTTTAATGTACCTTGGACTTAGTTTACCCCTTTTTCCGAACCGCATCACCCCTTTCATGGGCGAAACCTTCAACAAGACTTGTTCACCTTCCATGAACTCTAAGTCCCTAACCTTTCGATCTGCATATTCTTTTTGTCTACTTTGCGCCGCTAGAAGCTTTTCTTGAATAGACTTCACTTTCTCTATCGAATCTCTCAAAAGGTCAGTACCCCAAGGCCTAACCTCAAATGCATCAAACCAACCAATGGGAGATCTACATCTCCTACCATACAAGGATTCGAATGGAGCCATGTCAATGCTTGAGTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAGGAAGCTATCCCAATGACCACCAAACTCTATCACACACGCACGAAGCATATCCTCCAACACTTGAATTGTCCTTTCAGACTGACCATCGGTCTGAGGATGGAACGCAGTACTAAGGTCCAACCTTGTACCCAATTCCGCATGCAATGTTTTCCAAAACTTAGAAGTAAACTGCGTACCTCTATCTGATATGATGGAGAGTGGAACCCCATGCAATCGCACCACTTCTGAGATGTAAAGTTTGGCTAACTTTTCTGCATTGTAAGTCACCTTGACCGGAATGAAATGAGCTGATTTAGTTAACCTATCAACAATCACCCAAATGGAGTCATACTTAACCATTGTCTTTGGAAGACCAACCACAAAATCCATTGCTATTCTTTCCCACTTCCATTCCGGAATGGGCATTCTCTGAAGTGTTCCTCCGGGCCTTTGGTGTTCATACTTTACTTATTGACAGTTTGGACATTTGGCAATAAAATCCACAATGTCACGCTTCATTCTACTCCACCAAAAGTGTTGTTTTAGGTCACGATACATCTTGGTTGCACCCGGATGTATAGAATACCTTGAACTATGAGCCTCTGTCAGAATAGTGTTGATCAAATCATCGACGCGGGGTACACATACCCTTCCCTTGATTCTCAAAACACCTTCCTCATCGATTTGTGCTTCCTTAGACTCTCCTCGCAATACCTTATCTTGGATTCTTCTTAGTTTCTCATCATCAAACTGTTTTCCCTTAATTTTGTCAAGAAAAGAAGATCTTGACTCCACAGAAGCCAACAATCCTCCCTTCTCATTTACTTCTACTCTCATCAAGTCATTAGCTAGAGTCTGAACCTCTCTAGCCAAAGGGCGTCTAGAAGCTTGCAAGTGAGCTAGACTTCCCATGCTTCCCGCCTTTCTACTTAAAGTATCCGCTACAACATTCGCCTTTCCCGGATGATACAAGATAGTGATATCGTTGTCCTTTAGTAACTCCATCCATCTCCTCTATCTTAAGTTCAAATCTTTCTGAGTAAAGACATACTGTAGGCTACGATGATCCGTATAGATCTCACACTTAACCCCATACAAATAGTGTCTCCATTGCTTTAATGCAAACACCACCGCAGCCAATTCCAAATCGTGGGTCGGATAGTTACGTTCATGAACCTTTAGTTGCCTTGAGGCATAAGCAATCACACTCTTCTCTTGCATTAGTACTGCACCCAAACCAGAATAGGATGCATCACAATAAACAATGAAGTTCTTACCCTCTACTGGCAAGGTAAGGATAGGTGCGGTAGTCAACAAAGTCTTGAGCTTCTGAAAGCTTTCCTCACACTCATCCGACCATACAAATGGAACATTCTGCTTAGTCAAGTTCGTCAATTGGGAAGCAATAGAAGAGAATCCCTTGACAAATTGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTGGGTCTTACCCAATTCTTGATTGTTTCAATCTTAGAAGGATCCACCATCACTCCTTCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTTAACATTTCCAATACCAATCTCAAATGCGCTTCATGCTCCTTCTTGCTCTTTGAGTATACCAATATATCATCAATAAATACGATCACAAAGAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGTAGGGGCATTCGTTAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTCGTTCGAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAATCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGGGGAAGAGGATAATTGTTCTTTATGGTTACCTTGTTTAGTTGTCTGTAGTCTATACACATTCGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATAAAGCCTTTGTTCAATAACACTTGAAGTTGTGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCCGGTTCGAGATCAATACAGAAGTCAATATCCCTATCCGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGAACTACTGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAATCATTTTCTTAGCACGAAGAAAGGAGACGATGCGGACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGGTCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGTATTACAATCCAAGATTGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATCACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTTACCAAACAAGACCTATATACCTTTTCAACTACCACATACTCACCCACCAGAGTAGAGACACAAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAACGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGTTCGTTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGGTTGCCCATCACCTCGGCCGTTCTGGTAACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAACATTTGGAGGTCTGTAACTCTGTTTTGGACAATATCACTTAATATGTCCAATCTCCCCACATCCATAGCACTCTCTGGGTTCATGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCGGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTTAGTAACTTCCCGAACCCTGTCCTCTAGTGTAAGTACCGTTAAACTCACCTCCCTTTCGAAACCTTTTTGATGTCGATGTCGTAGTGAAGTCATCTGGCTTTACTCCTTCCACTTCTATCACAAAGTCTACCACCTCTTGGAAGGATTTTGCCGTTGCCGCTATCTGTAAGGCCGAAATCCGCAATTCTGACCTTAACCCCTTCACAAACCGGCGAATTCGATCTTGGGGACTGAAACATAATTGGGTGGCATATCTGGATAGTGCGCGAAACCTAGCCTCGTAAGCATTTACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTTCGGGGGATATACTTCTCCATAAAAAAGCTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTCTGTTGGTTGACACTCAATATGTGACCGCCACCACATTTTGGCGTTCCCTTGAAACTGATAACTCACGAACTCAACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCATGTCAGTCAACCAGAAAATCGTAAGCATCCTCAGATTCCACACCCTTGAAGACTGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAAACGTGGAAACGTGCCTATTTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACCTCCGGAGCCTGAGGTGCTGGTGCAGAAAACACTGGGGGTGTCTGGCCCTGATCAGACAACCCACTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTTCACTTGTTCATTCACCCCATCCTCCCCCTCTCTTATCACTTCCTCAGTCGGTGGGGGAGTCACTGCCCTAGTATCAGATGGGCTAGGTGCTCGTCCTCTTCCTCTAGAGGACGCCCTCCCACGACCTCTACCACGGCCTCTTGCCGCTGCTCTTCCTCGAGCTACAGCCCCAGTGGCTGGCTCAGACGCACCTTGTCTCGCCGGTGCTGGTGTTGGCGTAGGCGTAGTCGTTGCTCTAGTTCTAAACATCTGCGAAAGAGAGTGAAGATGGTCAAATACCAATTCATATCGCCTAGATACCAATTGGACTCAAGTAGTAGCACGAAAGAAAGAACGAAAGAGTGAAATTTTCCTAAAGTCTTATAGCCTCTCAAGGAAAAGTAAAGGCGTCCCCCTACCGTTCCTTAAGACTCTACTAGACCTGTTCTTGTGTGATGAGACCAACGAACCTAATGCTCTGATACCAAGTTTGTCACGACCCAAATCCGGGCCGCGACTGGCACCCACACTTACCCTCCTATGTGAGCGAACCAACCAATCTAAACCTTAACATTTCAATGTAACATCAACAGAAAATAATGCGGAAGACTTAAACTCATTAATAAAAACCAATTCAATAACTATCAATATTCAACATCTATTATTTCCAAAACCTGGAAGTCATCATCACAAGAACATCTACTTTAAACTACTAATTCTAAGAGTTTCTAAAAGCTAAAAATACATAAGAAGCTAGTCCATGCCGGAGGTTCAAGGCATCAAGACATGAAGGAGAAGATCCAGTCCAAGCTAGACGCGTTAGCTCACCCTGAAGATCCGGTGTGACGAAGACTGGCTTGAGTTACTGTTGAGTCGAAGATGACGGCACGTTTGCTGCACTCCACAAATAACCAGAAGAAAACATAAAAGTAGGGGTCAGTACAAACCACGGGTACTGAGTAGATATCATCGGTCAACTCAAAATAGGGAACAGTATGTATTAAGCAATATCATAAAATCAACTAATATCCTTAACATGCAGCATTTATAGTTACCATAACCCTTGGTTACAACACCAAGCACATCAATGAGGACTCACACCTCCTCATCATACTCATTTGGGAATTTAGTTCATTAGATTGGATATATTATCATATTTCAAGATTCATTATCTTTATTCCCCTCGTGTCGGTACGTGACACTCCGCTCCTCAATATACTATCCTGGTACCGGAATGTGGCACCCGATCCATATTCTATCCTGGTGTCGGAACGTGACACTCCGATCCTCATATACTATCCTGGTACCAGAACGTGGCACCCGATCCATATATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTACCGGAACGTGGCACCCGATCCATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTACCGGAACGTGGCACCCGATCCCCTAATCTCACTACTTTCATTCATCAAGCCTTCTTTCATACCAAGGCATCATCATTATCAAAGTAGATTAGG</genome_strand>
        <mrna_strand>AGTATGTATTAAGCAATATCATAAAATTAACTAATATCCTTAGCATGCAGCATTTGCAATTACCATAACCCTTGGTTGCATCACCAAGCACATCAATGAGGACTCACACCTCCTCATCATACTTATTTGGGAATTTAGTTCATTGGATTGCATATATTAACATATTTCAAGATTCATCATATTTATTCCCCTCGTGTCCTTACGTGACACTCCACTCCTCAATATACTATCCTGGCACCGGAACGTGGCACCCGATCCATATTCTATCCTGGTGTCAGAACGTGACAC......................................................................................................................CCGATCCATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTACCGGAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCACCCGATCCATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTACCGGAACGTGGCACCCGATCCCCTAATCTCACCACTTTCGTTCATCAAGCCTTCTTTTATACCAAGGCATCATTATTAACAAAGTAGATTAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E209683" ref_strand="+" ref_description="SGN-E209683 [cLEC-54-L6]">
      <seq>taatgaactaaattcccaaatgagtatgatgaggaggtgtgagtcctcattgatgtgcttggtgttgtaaccaagggttatggtaactataaatgctgcatgttaaggatattagttgattttatgatattgcttaatacatactgttccctattttgagttggccgatgatatctactcagtacccgtggtttgtactgacccctacttttatgtttatcttcttgttatttgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="59688" stop="60522"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59988" g_stop="60222" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="236" r_length="236" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-E209683" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>235</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E209683" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59988" e_stop="60222"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATGAACTAAATTCCCAAATGAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGTTGTAACCAAGGGTTATGGTAACTATAAATGCTGCATGTTAAGGATATTAGTTGATTTTATGATATTGCTTAATACATACTGTTCCCTATTTTGAGTTGACCGATGATATCTACTCAGTACCCGTGGTTTGTACTGACCCCTACTTTTATGTTT-TCTTCTGGTTATTTGTG</genome_strand>
        <mrna_strand>TAATGAACTAAATTCCCAAATGAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGTTGTAACCAAGGGTTATGGTAACTATAAATGCTGCATGTTAAGGATATTAGTTGATTTTATGATATTGCTTAATACATACTGTTCCCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGGTTTGTACTGACCCCTACTTTTATGTTTATCTTCTTGTTATTTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E351546" ref_strand="+" ref_description="SGN-E351546 [cTOS-12-I18]">
      <seq>ttggccgatgatatctactcagtagccgtgttttgtactgacccctacttttatgtttttcttcttggtatttgtggagtgcagcaaacgtgccgtcatcttcgactcaacagtaactcaagccagtcttcgtcacaccggatcttcagggtgagctaacgcttctagcttggactggatcttctccttcatgtcttgatgccttgaacttccggcatggactagcttcttatgtaattttttagcttcttagaaactcttagaattagtagtttaaagtagatgttcttgtgatgatgacttccaggttttgggaataatagatgtttaataatagtagttattgattttattaatgagtttaagtcttccgcattactttctgttgctattacattgaaatgttaaggtttagattggttggttcgctcacataggagggtaagtgtgggtgccagtggcggcccggatttgggtcgtgacaaaacttggtatcagagcattaggttcgttggtctcatcacacaagaacaagtctagtagagtcttaaggaacggtagggggacgcttttacttttccttgagaggctataagactttaggaaaacttcactctttcattctttctttcgtgctactacttcgagtcaattggtatctaagcgatacgaattggtatctgaccatnctcactctcttgccagatgggtagaactagagcaacgact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="59848" stop="114838"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60148" g_stop="60878" g_length="731"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="729" r_length="729" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-E351546" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>731</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E351546" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60148" e_stop="60878"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGACCGATGATATCTACTCAGTACCCGTGGTTTGTACTGACCCCTACTTTTATG-TTTTCTTCTGGTTATTTGTGGAGTGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCAAGCCAGTCTTCGTCACACCGGATCTTCAGGGTGAGCTAACGCGTCTAGCTTGGACTGGATCTTCTCCTTCATGTCTTGATGCCTTGAACCTCCGGCATGGACTAGCTTCTTATGT-A-TTTTTAGCTT-TTAGAAACTCTTAGAATTAGTAGTTTAAAGTAGATGTTCTTGTGATGATGACTTCCAGGTTTTGGAAATAATAGATGTTGAATATTGATAGTTATTGAATTGGTTTTTATTAATGAGTTTAAGTCTTCCGCATTATTTTCTGTTGATGTTACATTGAAATGTTAAGGTTTAGATTGGTTGGTTCGCTCACATAGGAGGGTAAGTGTGGGTGCCAGTCGCGGCCCGGATTTGGGTCGTGAC-AAACTTGGTATCAGAGCATTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGAGTCTTAAGGAACGGTAGGGGGACGCCTTTACTTTTCCTTGAGAGGCTATAAGACTTTAGGAAAATTTCACTCTTTCGTTCTTTCTTTCGTGCTACTACTT-GAGTCCAATTGGTATCTAGGCGATATGAATTGGTATTTGACCATCTTCACTCTCTTTCGCAGATGTTTAGAACTAGAGCAACGACT</genome_strand>
        <mrna_strand>TTGGCCGATGATATCTACTCAGTAGCCGTGTTTTGTACTGACCCCTACTTTTATGTTTTTCTTCTTGGTATTTGTGGAGTGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCAAGCCAGTCTTCGTCACACCGGATCTTCAGGGTGAGCTAACGCTTCTAGCTTGGACTGGATCTTCTCCTTCATGTCTTGATGCCTTGAACTTCCGGCATGGACTAGCTTCTTATGTAATTTTTTAGCTTCTTAGAAACTCTTAGAATTAGTAGTTTAAAGTAGATGTTCTTGTGATGATGACTTCCAGGTTTTGGGAATAATAGATGTTTAATAATAGTAGTTATTG-A-----TTTTATTAATGAGTTTAAGTCTTCCGCATTACTTTCTGTTGCTATTACATTGAAATGTTAAGGTTTAGATTGGTTGGTTCGCTCACATAGGAGGGTAAGTGTGGGTGCCAGTGGCGGCCCGGATTTGGGTCGTGACAAAACTTGGTATCAGAGCATTAGGTTCGTTGGTCTCATCACACAAGAACAAGTCTAGTAGAGTCTTAAGGAACGGTAGGGGGACGCTTTTACTTTTCCTTGAGAGGCTATAAGACTTTAGGAAAACTTCACTCTTTCATTCTTTCTTTCGTGCTACTACTTCGAGT-CAATTGGTATCTAAGCGATACGAATTGGTATCTGACCATNCTCACTCTCTTGC-CAGATGGGTAGAACTAGAGCAACGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E356696" ref_strand="+" ref_description="SGN-E356696 [cTOS-21-K7]">
      <seq>ttggccgatgatatctactcagtagccgtgttttgtactgacccctacttttatgtttttcttcttgttatttgtggagtgcagcaaacgtgccgtcatcttcgactcaacagtaactcaagccagtcttcgtcacaccggatcttcagggtgagctaacgcttctagcttggactggatcttctccttcatgtcttgatgccttgaacttccggcatggactagcttcttatgtaattttttagcttcttagaaactcttagaattagtagtttaaagtagatgttcttgtgatgatgacttccaggttttgggaataatagatgtttaataatagtagttattgattttattaatgagtttaagtcttccgcattactttctgttgctattacattgaaatgttaaggtttagattggttggttcgctcacatangagggtaagtgtgggtgccagtggcggcccggatttgggtcgtgacaaaacttggtatcagagcattaggttcgttggtctcatcacacaagaacaagtctagtagagtcttaaggaacggtagggggacgcttttacttttccttgagaggctataagactttaggaaaacttcactctttcattctttctttcgtgctactacttgagtccaattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="59848" stop="114763"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60148" g_stop="60803" g_length="656"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="655" r_length="655" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-E356696" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>656</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E356696" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60148" e_stop="60803"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGACCGATGATATCTACTCAGTACCCGTGGTTTGTACTGACCCCTACTTTTATG-TTTTCTTCTGGTTATTTGTGGAGTGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCAAGCCAGTCTTCGTCACACCGGATCTTCAGGGTGAGCTAACGCGTCTAGCTTGGACTGGATCTTCTCCTTCATGTCTTGATGCCTTGAACCTCCGGCATGGACTAGCTTCTTATGT-A-TTTTTAGCTT-TTAGAAACTCTTAGAATTAGTAGTTTAAAGTAGATGTTCTTGTGATGATGACTTCCAGGTTTTGGAAATAATAGATGTTGAATATTGATAGTTATTGAATTGGTTTTTATTAATGAGTTTAAGTCTTCCGCATTATTTTCTGTTGATGTTACATTGAAATGTTAAGGTTTAGATTGGTTGGTTCGCTCACATAGGAGGGTAAGTGTGGGTGCCAGTCGCGGCCCGGATTTGGGTCGTGAC-AAACTTGGTATCAGAGCATTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGAGTCTTAAGGAACGGTAGGGGGACGCCTTTACTTTTCCTTGAGAGGCTATAAGACTTTAGGAAAATTTCACTCTTTCGTTCTTTCTTTCGTGCTACTACTTGAGTCCAATTG</genome_strand>
        <mrna_strand>TTGGCCGATGATATCTACTCAGTAGCCGTGTTTTGTACTGACCCCTACTTTTATGTTTTTCTTCTTGTTATTTGTGGAGTGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCAAGCCAGTCTTCGTCACACCGGATCTTCAGGGTGAGCTAACGCTTCTAGCTTGGACTGGATCTTCTCCTTCATGTCTTGATGCCTTGAACTTCCGGCATGGACTAGCTTCTTATGTAATTTTTTAGCTTCTTAGAAACTCTTAGAATTAGTAGTTTAAAGTAGATGTTCTTGTGATGATGACTTCCAGGTTTTGGGAATAATAGATGTTTAATAATAGTAGTTATTG-A-----TTTTATTAATGAGTTTAAGTCTTCCGCATTACTTTCTGTTGCTATTACATTGAAATGTTAAGGTTTAGATTGGTTGGTTCGCTCACATANGAGGGTAAGTGTGGGTGCCAGTGGCGGCCCGGATTTGGGTCGTGACAAAACTTGGTATCAGAGCATTAGGTTCGTTGGTCTCATCACACAAGAACAAGTCTAGTAGAGTCTTAAGGAACGGTAGGGGGACGCTTTTACTTTTCCTTGAGAGGCTATAAGACTTTAGGAAAACTTCACTCTTTCATTCTTTCTTTCGTGCTACTACTTGAGTCCAATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E356206" ref_strand="+" ref_description="SGN-E356206 [cTOS-20-F19]">
      <seq>ttggccgatgatatctactcagtagccgtgttttgtactgacccctacttttatgtttttcttcttgttatttgtggagtgcagcaaacgtgccgtcatcttcgactcaacagtaactcaagccagtcttcgtcacaccggatcttcagggtgagctaacgcttctagcttggactggatcttctccttcatgtcttgatgccttgaacttccggcatggactagcttcttatgtaattttttagcttcttagaaactcttagaattagtagtttaaagtagatgttcttgtgatgatgacttccaggttttgggaataatagatgtttaataatagtagttattgattttattaatgagtttaagtcttccgcattactttctgttgctattacattgaaatgttaaggtttagattggttggttcgctcacataggagggtaagtgtgggtgccagtggcggcccggatttgggtcgtgacaaaacttggtatcagagcattagggtcgttggtctcatcacacaagaacaagtctagtagagtcttaagggacggtanggggacgcttttacttttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="59848" stop="114689"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60148" g_stop="60728" g_length="581"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="580" r_length="580" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-E356206" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>581</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E356206" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60148" e_stop="60728"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGACCGATGATATCTACTCAGTACCCGTGGTTTGTACTGACCCCTACTTTTATG-TTTTCTTCTGGTTATTTGTGGAGTGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCAAGCCAGTCTTCGTCACACCGGATCTTCAGGGTGAGCTAACGCGTCTAGCTTGGACTGGATCTTCTCCTTCATGTCTTGATGCCTTGAACCTCCGGCATGGACTAGCTTCTTATGT-A-TTTTTAGCTT-TTAGAAACTCTTAGAATTAGTAGTTTAAAGTAGATGTTCTTGTGATGATGACTTCCAGGTTTTGGAAATAATAGATGTTGAATATTGATAGTTATTGAATTGGTTTTTATTAATGAGTTTAAGTCTTCCGCATTATTTTCTGTTGATGTTACATTGAAATGTTAAGGTTTAGATTGGTTGGTTCGCTCACATAGGAGGGTAAGTGTGGGTGCCAGTCGCGGCCCGGATTTGGGTCGTGAC-AAACTTGGTATCAGAGCATTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGAGTCTTAAGGAACGGTAGGGGGACGCCTTTACTTTTC</genome_strand>
        <mrna_strand>TTGGCCGATGATATCTACTCAGTAGCCGTGTTTTGTACTGACCCCTACTTTTATGTTTTTCTTCTTGTTATTTGTGGAGTGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCAAGCCAGTCTTCGTCACACCGGATCTTCAGGGTGAGCTAACGCTTCTAGCTTGGACTGGATCTTCTCCTTCATGTCTTGATGCCTTGAACTTCCGGCATGGACTAGCTTCTTATGTAATTTTTTAGCTTCTTAGAAACTCTTAGAATTAGTAGTTTAAAGTAGATGTTCTTGTGATGATGACTTCCAGGTTTTGGGAATAATAGATGTTTAATAATAGTAGTTATTG-A-----TTTTATTAATGAGTTTAAGTCTTCCGCATTACTTTCTGTTGCTATTACATTGAAATGTTAAGGTTTAGATTGGTTGGTTCGCTCACATAGGAGGGTAAGTGTGGGTGCCAGTGGCGGCCCGGATTTGGGTCGTGACAAAACTTGGTATCAGAGCATTAGGGTCGTTGGTCTCATCACACAAGAACAAGTCTAGTAGAGTCTTAAGGGACGGTANGGGGACGCTTTTACTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E355114" ref_strand="+" ref_description="SGN-E355114 [cTOS-18-B12]">
      <seq>ttaggttcgttggtctcatcacacaagaacaggtctagtagagtctttaggaacggtagggggacgcctttacttttctttgagaggctataagactttaggaaaatttcaccctttcattctttctttcgtgctactacttgagtccaattggtatctaggcgatacaaattggtatctgaccatcttcactctcttttgcagatggttagaactagagcaacgaccacgtcaacaccaacaccggccagacaagaaacaactgagccagccactggggctgtgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="60351" stop="61242"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60651" g_stop="60942" g_length="292"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="286" r_length="286" r_score="0.918"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-E355114" ref_strand="+">
        <total_alignment_score>0.918</total_alignment_score>
        <cumulative_length_of_scored_exons>292</cumulative_length_of_scored_exons>
        <coverage percentage="1.021" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E355114" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60651" e_stop="60942"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGAGTCTTAAGGAACGGTAGGGGGACGCCTTTACTTTTCCTTGAGAGGCTATAAGACTTTAGGAAAATTTCACTCTTTCGTTCTTTCTTTCGTGCTACTACTTGAGTCCAATTGGTATCTAGGCGATATGAATTGGTATTTGACCATCTTCACTCTCTTTCGCAGATGTTTAGAACTAGAGCAACGACTACGCCTACGCCAACACCAGCACCGGCGAGACAAGGTGCGTCTGAGCCAGCCACTGGGGCTGTAG</genome_strand>
        <mrna_strand>TTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGAGTCTTTAGGAACGGTAGGGGGACGCCTTTACTTTTCTTTGAGAGGCTATAAGACTTTAGGAAAATTTCACCCTTTCATTCTTTCTTTCGTGCTACTACTTGAGTCCAATTGGTATCTAGGCGATACAAATTGGTATCTGACCATCTTCACTCTCTTTTGCAGATGGTTAGAACTAGAGCAACG---A--CC-ACGTCAACACCAACACCGGCCAGACAAGAAACAACTGAGCCAGCCACTGGGGCTGTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E352180" ref_strand="+" ref_description="SGN-E352180 [cTOS-13-I20]">
      <seq>cccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattataggcccagtagtcaaacgtggaaatgtacctatgtgcaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataaaccgctaagataagccagaacctgattgatcatctctggggtaggttggggtggcatttcctcattttgcacttgttcagtttccccatcctccccttctcttattacttcctcagtcggtggaggagtcaccgccctagtaccagatgggctcggttctcgttctcttcctctagatgacgtcctcccacgacctctaccacggccccttgccgctgttctcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="61681" stop="60649"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61381" g_stop="60949" g_length="433"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="433" r_length="433" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E352180" ref_strand="+">
        <total_alignment_score>0.915</total_alignment_score>
        <cumulative_length_of_scored_exons>433</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E352180" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61381" e_stop="60949"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCTTGAAGACTGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAAACGTGGAAACGTGCCTATTTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACCTCCGGAGCCTGAGGTGCTGGTGCAGAAAACACTGGGGGTGTCTGGCCCTGATCAGACAACCCACTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTTCACTTGTTCATTCACCCCATCCTCCCCCTCTCTTATCACTTCCTCAGTCGGTGGGGGAGTCACTGCCCTAGTATCAGATGGGCTAGGTGCTCGTCCTCTTCCTCTAGAGGACGCCCTCCCACGACCTCTACCACGGCCTCTTGCCGCTGCTCTTC</genome_strand>
        <mrna_strand>CCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAAACGTGGAAATGTACCTATGTGCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAAACCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGTTCAGTTTCCCCATCCTCCCCTTCTCTTATTACTTCCTCAGTCGGTGGAGGAGTCACCGCCCTAGTACCAGATGGGCTCGGTTCTCGTTCTCTTCCTCTAGATGACGTCCTCCCACGACCTCTACCACGGCCCCTTGCCGCTGTTCTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E329287" ref_strand="+" ref_description="SGN-E329287 [cTOD-2-K13]">
      <seq>acctagcccatctggtactaaggcggtgacacctccaccaactgaggaagtggtaagagagggtgaggatggggagaatgaacaagtgcagaatgaggaattgccaccccaacctacccaagagatgatcaatcaggttcttgcttaccttagcgggttatctgatcaaggccaagcacctccagtgttttctgcactagcacctcaggctccggaggtacaacatgcgcctactgtgactccccgcatcgatacctcattggaaataggaacgtttccccgtctgactacagggcctataatgacaaatgatcagcatgaactttttagtaagttcttgaaattgaaacctcaagtctacaagggtgttgaatctgaggatgcctacgattttctggttgactgtcatgagctactacacaagatgggtatagtagaacggtttggtgttgagtttgtgacttatcagtttcaagggaacgccaaaatgtggtggcggtcacatgttgagtgtcaaccaacagaggcaccacgtatgacttgggcatcattct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="60716" stop="61869"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61016" g_stop="61569" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="554" r_length="554" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-E329287" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E329287" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61016" e_stop="61569"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCTAGCCCATCTGATACTAGGGCAGTGACTCCCCCACCGACTGAGGAAGTGATAAGAGAGGGGGAGGATGGGGTGAATGAACAAGTGAAAAATGAGGAAATGCCACCCCAACCTACCCCAGAGATGATCAATCAGGTTCTGGCTTATCTTAGTGGGTTGTCTGATCAGGGCCAGACACCCCCAGTGTTTTCTGCACCAGCACCTCAGGCTCCGGAGGTACAACATGCGGCTACTATGGCTCCCCGCATGGATGTTCCATTGGAAATAGGCACGTTTCCACGTTTGACTACTGGGCCTATAATGACAAATGATCAGCATGAACTTTTCAGTAAGTTCTTGAAATTGAAACCTCCAGTCTTCAAGGGTGTGGAATCTGAGGATGCTTACGATTTTCTGGTTGACTGACATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTCGTGAGTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATATTGAGTGTCAACCAACAGAGGCACCACCTATGACTTGGGCCTCATTCT</genome_strand>
        <mrna_strand>ACCTAGCCCATCTGGTACTAAGGCGGTGACACCTCCACCAACTGAGGAAGTGGTAAGAGAGGGTGAGGATGGGGAGAATGAACAAGTGCAGAATGAGGAATTGCCACCCCAACCTACCCAAGAGATGATCAATCAGGTTCTTGCTTACCTTAGCGGGTTATCTGATCAAGGCCAAGCACCTCCAGTGTTTTCTGCACTAGCACCTCAGGCTCCGGAGGTACAACATGCGCCTACTGTGACTCCCCGCATCGATACCTCATTGGAAATAGGAACGTTTCCCCGTCTGACTACAGGGCCTATAATGACAAATGATCAGCATGAACTTTTTAGTAAGTTCTTGAAATTGAAACCTCAAGTCTACAAGGGTGTTGAATCTGAGGATGCCTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACGTATGACTTGGGCATCATTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E356614" ref_strand="+" ref_description="SGN-E356614 [cTOS-21-N3]">
      <seq>gcgaatccgctcttgaggactgaaacagagttgagtggcatatctggatagtgcacgaaacttagcctcataagcattaactgacaccctaccttgctctaggctcaagaactcatcccttttcttatccctcaaagtccgggggatatacttctccataaacaaactatagaatgaggcccaagtcataggtgatgcctctattggttgacactcgatatgtgaccgccaccacatttgggcgttcccttgaaactgataagtcacaaactccacaccaaaccgttctactatacccatcttgtgtagtagctcgtgacagtcaaccagaaaatcataagcatcctccgattcagcacccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattatagggacagtagtcaaacgtggaaatgtgcctatgtccaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataacccgctaagataagccagaacctgattgatcatctctggggtaggttggggtggcatttcctcattttgcacttgntcagtttccccatccctccctttctctattacttcctcagtcagtggaagagtcactgccctagtatcagatgggct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="62039" stop="60720"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61739" g_stop="61020" g_length="720"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="720" r_length="720" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E356614" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>720</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E356614" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61739" e_stop="61020"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGAATTCGATCTTGGGGACTGAAACATAATTGGGTGGCATATCTGGATAGTGCGCGAAACCTAGCCTCGTAAGCATTTACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTTCGGGGGATATACTTCTCCATAAAAAAGCTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTCTGTTGGTTGACACTCAATATGTGACCGCCACCACATTTTGGCGTTCCCTTGAAACTGATAACTCACGAACTCAACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCATGTCAGTCAACCAGAAAATCGTAAGCATCCTCAGATTCCACACCCTTGAAGACTGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAAACGTGGAAACGTGCCTATTTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACCTCCGGAGCCTGAGGTGCTGGTGCAGAAAACACTGGGGGTGTCTGGCCCTGATCAGACAACCCACTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTTCACTTGTTCATTCACCCCAT-CCTCCCCCTCTCTTATCACTTCCTCAGTCGGTGGGGGAGTCACTGCCCTAGTATCAGATGGGCT</genome_strand>
        <mrna_strand>GCGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACTGACACCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCTTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAACTATAGAATGAGGCCCAAGTCATAGGTGATGCCTCTATTGGTTGACACTCGATATGTGACCGCCACCACATTTGGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAGAAAATCATAAGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGGACAGTAGTCAAACGTGGAAATGTGCCTATGTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGNTCAGTTTCCCCATCCCTCCCTTTCTC-TATTACTTCCTCAGTCAGTGGAAGAGTCACTGCCCTAGTATCAGATGGGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E352401" ref_strand="+" ref_description="SGN-E352401 [cTOS-9-N1]">
      <seq>aatccgctcttgaggactgaaacagagttgagtggcatatctggatagtgcacgaaacttagcctcataagcattaactgacaccctaccttgctctaggctcaagaactcatcccttttcttatccctcaaagtccgggggatatacttctccataaacaaactatagaatgaggcccaagtcataggtgatgcctctattggttgacactcgatatgtgaccgccaccacatttgggcgttcccttgaaactgataagtcacaaactccacaccaaaccgttctactatacccatcttgtgtagtagctcgtgacagtcaaccagaaaatcataagcatcctccgattcagcacccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattatagggacagtagtcaaacgtggaaatgtgcctatgtccaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataacccgctaagataagccagaacctgattgatcatctctggggtaggttggggtgccatttccctcatttgcacttgttcagtttccccatcctccccttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="62036" stop="60806"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61736" g_stop="61073" g_length="664"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="664" r_length="664" r_score="0.911"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E352401" ref_strand="+">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>664</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E352401" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61736" e_stop="61073"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTCGATCTTGGGGACTGAAACATAATTGGGTGGCATATCTGGATAGTGCGCGAAACCTAGCCTCGTAAGCATTTACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTTCGGGGGATATACTTCTCCATAAAAAAGCTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTCTGTTGGTTGACACTCAATATGTGACCGCCACCACATTTTGGCGTTCCCTTGAAACTGATAACTCACGAACTCAACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCATGTCAGTCAACCAGAAAATCGTAAGCATCCTCAGATTCCACACCCTTGAAGACTGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAAACGTGGAAACGTGCCTATTTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACCTCCGGAGCCTGAGGTGCTGGTGCAGAAAACACTGGGGGTGTCTGGCCCTGATCAGACAACCCACTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTTCACTTGTTCATTCACCCCATCCTCCCCCTCT</genome_strand>
        <mrna_strand>AATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACTGACACCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCTTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAACTATAGAATGAGGCCCAAGTCATAGGTGATGCCTCTATTGGTTGACACTCGATATGTGACCGCCACCACATTTGGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAGAAAATCATAAGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGGACAGTAGTCAAACGTGGAAATGTGCCTATGTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGCCATTTCCCTCATTTGCACTTGTTCAGTTTCCCCATCCTCCCCTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E245958" ref_strand="+" ref_description="SGN-E245958 [cLEF-51-E16]">
      <seq>caggctccggaggtacaatatgcggctactatggctccccgcatggatgttccattggaaataggcacgtttccaagtctgactactgggcctataatgacaaatgatcagcatatattttcagtaagttcttgaaattgaaacctccagtcttcaaaggtgcggaatcggaggatgcttacgattttctggtggactgtcatgagctactacacaagaagggtatagtagaacggtttggtgttgagttcgtgagttatcagtttcaagggaacgccaaaatgtggtggcggtcacatattgagtgtcaaccaacagaagcaccacctatgacttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="60921" stop="61859"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61221" g_stop="61559" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="338" r_length="338" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-E245958" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>339</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E245958" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61221" e_stop="61559"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGCTCCGGAGGTACAACATGCGGCTACTATGGCTCCCCGCATGGATGTTCCATTGGAAATAGGCACGTTTCCACGTTTGACTACTGGGCCTATAATGACAAATGATCAGCATGAACTTTTCAGTAAGTTCTTGAAATTGAAACCTCCAGTCTTCAAGGGTGTGGAATCTGAGGATGCTTACGATTTTCTGGTTGACTGACATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTCGTGAGTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATATTGAGTGTCAACCAACAGAGGCACCACCTATGACTTGG</genome_strand>
        <mrna_strand>CAGGCTCCGGAGGTACAATATGCGGCTACTATGGCTCCCCGCATGGATGTTCCATTGGAAATAGGCACGTTTCCAAGTCTGACTACTGGGCCTATAATGACAAATGATCAGCAT-ATATTTTCAGTAAGTTCTTGAAATTGAAACCTCCAGTCTTCAAAGGTGCGGAATCGGAGGATGCTTACGATTTTCTGGTGGACTGTCATGAGCTACTACACAAGAAGGGTATAGTAGAACGGTTTGGTGTTGAGTTCGTGAGTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATATTGAGTGTCAACCAACAGAAGCACCACCTATGACTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E356912" ref_strand="+" ref_description="SGN-E356912 [cTOS-22-F17]">
      <seq>caggatcaaacaatacggaagccatgcaatcacaaactagaagattacctgtgatgacagcatcagatgcctccgcttcagaccgcccagggaaagcgtaacaatgggccctatcgtttgtctgcccattgcccctaccatgttgtgatgtagtggccccagtttgcccattacctctgccgttttggtgaccaccattacctcgaccaccacgtcctccagaataacggcctctaccatgaccacctctacctctagctattgggggtctataacttggtccaggacaatttatcctaatatgtccaatctccccacatccataacattctctggagtcactcataggccccttggagaagtgttgaccggtctgaggtggacccccaactacagtctgtagtgaagactgaatgggtcgagccgagtaacctccggaaccttgtcctctagagtaagaacccttaaactcacctccctttcgaaacctctttgatgttgatgtcgtggtgaagtcgtctggcttcactccttccacttctatcacaaagtctaccacttcttggaaggattttgccgttgccgctacctgtaaggccgaaatccgcaattctgacctcaaccccttcacaaaccggagaatccgctcttgaggactgaaacagagttgagtggcatatccggatagtgcacggaacttagcctcataagcattaaccgacatcctaccttgctctaggctcaggaactcatctcttttcctatccctcaaagtccgggggatatactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="62676" stop="61287"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62376" g_stop="61587" g_length="790"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="790" r_length="790" r_score="0.910"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E356912" ref_strand="+">
        <total_alignment_score>0.910</total_alignment_score>
        <cumulative_length_of_scored_exons>790</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E356912" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62376" e_stop="61587"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGTTCGTTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGGTTGCCCATCACCTCGGCCGTTCTGGTAACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAACATTTGGAGGTCTGTAACTCTGTTTTGGACAATATCACTTAATATGTCCAATCTCCCCACATCCATAGCACTCTCTGGGTTCATGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCGGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTTAGTAACTTCCCGAACCCTGTCCTCTAGTGTAAGTACCGTTAAACTCACCTCCCTTTCGAAACCTTTTTGATGTCGATGTCGTAGTGAAGTCATCTGGCTTTACTCCTTCCACTTCTATCACAAAGTCTACCACCTCTTGGAAGGATTTTGCCGTTGCCGCTATCTGTAAGGCCGAAATCCGCAATTCTGACCTTAACCCCTTCACAAACCGGCGAATTCGATCTTGGGGACTGAAACATAATTGGGTGGCATATCTGGATAGTGCGCGAAACCTAGCCTCGTAAGCATTTACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTTCGGGGGATATACTT</genome_strand>
        <mrna_strand>CAGGATCAAACAATACGGAAGCCATGCAATCACAAACTAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGCCCATTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCGTTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGGGTCTATAACTTGGTCCAGGACAATTTATCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTGGAGTCACTCATAGGCCCCTTGGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATGGGTCGAGCCGAGTAACCTCCGGAACCTTGTCCTCTAGAGTAAGAACCCTTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTTGATGTCGTGGTGAAGTCGTCTGGCTTCACTCCTTCCACTTCTATCACAAAGTCTACCACTTCTTGGAAGGATTTTGCCGTTGCCGCTACCTGTAAGGCCGAAATCCGCAATTCTGACCTCAACCCCTTCACAAACCGGAGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCCGGATAGTGCACGGAACTTAGCCTCATAAGCATTAACCGACATCCTACCTTGCTCTAGGCTCAGGAACTCATCTCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E356209" ref_strand="+" ref_description="SGN-E356209 [cTOS-20-H15]">
      <seq>ttcagaccgcccagggaaagcgtaacaatgggccctatcgttcgtctgtccgttgcccctaccatgttgtgatgtagtggccccagtttgcccattacctctgccattttggtgaccaccattacctcgaccaccacgtcctccagaataacggcctctaccatgaccacctctacctctagctattgggggtctataactttgtctgggacaatttttcctaatatgtccaatctccccacatccataacattctctggagtcaagcataggcccctcggagaagtgttaaccggtctgaggtggtctcccaactacagtctgtagtgaagactgaattggtcggactgagtaacttcccgaaccctgtcctctagtgtaagaaccattaaactcacctcccttccgaaacctttttgatgtcgatgttgtggtgaagtcgtctggcttcactccttccacttctatcacaaagtctaccacttcttggaaggattttgccgttgccgctatctgtaaggacgaaatccgcaattctgacctcaaccccttcacaaaccggcgaatccgctcttgaggactgaaacagagttgagtggcatatctggatagtgcacgaaacttagcctcataagcattaaccgacatcctaccttgctctaggctcaagaactcatcccttttcctatccctcaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="62600" stop="61303"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62300" g_stop="61603" g_length="698"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="698" r_length="698" r_score="0.923"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E356209" ref_strand="+">
        <total_alignment_score>0.923</total_alignment_score>
        <cumulative_length_of_scored_exons>698</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E356209" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62300" e_stop="61603"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGTTCGTTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGGTTGCCCATCACCTCGGCCGTTCTGGTAACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAACATTTGGAGGTCTGTAACTCTGTTTTGGACAATATCACTTAATATGTCCAATCTCCCCACATCCATAGCACTCTCTGGGTTCATGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCGGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTTAGTAACTTCCCGAACCCTGTCCTCTAGTGTAAGTACCGTTAAACTCACCTCCCTTTCGAAACCTTTTTGATGTCGATGTCGTAGTGAAGTCATCTGGCTTTACTCCTTCCACTTCTATCACAAAGTCTACCACCTCTTGGAAGGATTTTGCCGTTGCCGCTATCTGTAAGGCCGAAATCCGCAATTCTGACCTTAACCCCTTCACAAACCGGCGAATTCGATCTTGGGGACTGAAACATAATTGGGTGGCATATCTGGATAGTGCGCGAAACCTAGCCTCGTAAGCATTTACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAG</genome_strand>
        <mrna_strand>TTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTCGTCTGTCCGTTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCATTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGGGTCTATAACTTTGTCTGGGACAATTTTTCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTGGAGTCAAGCATAGGCCCCTCGGAGAAGTGTTAACCGGTCTGAGGTGGTCTCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTGAGTAACTTCCCGAACCCTGTCCTCTAGTGTAAGAACCATTAAACTCACCTCCCTTCCGAAACCTTTTTGATGTCGATGTTGTGGTGAAGTCGTCTGGCTTCACTCCTTCCACTTCTATCACAAAGTCTACCACTTCTTGGAAGGATTTTGCCGTTGCCGCTATCTGTAAGGACGAAATCCGCAATTCTGACCTCAACCCCTTCACAAACCGGCGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E353359" ref_strand="-" ref_description="SGN-E353359 [cTOS-15-G18]">
      <seq>gcaaggtaggatgtaggtcaatgcatatgaggctaagtttcgtgcactatccagatatgccactcaactttgtttcagtccacaagagaggattcgtcgttttgtgaaagggttgaggtcagagttgcggatttcagcgttacaggtagcggctacggcaaaatccttgcaagaaatggttgacttcgatgtaattctgggtatgacttggctttctccaaattttgcaatcttggattgtaatgctaaaaccgtgacgttagccaagcctgggacagatctgttagtgtaggagggtgactacacttccaatccggtgcgtatcatctcctttcttcgtgctaagaaaatggttagtaaagggtgtttagctttcttggcacatctcaaggataacactacccaagtaccttcgattgactcagtttcagtagttcgtgagtttatggatgtgttccctgcagatcatcctggtatgccaccggatagggatattgacttctgtattgatctcgaaccgggcacacgccccatttttatacccccttatagaatggctcccgcagagttaagagagttaaaggcacaacttcaagagttattgaacaaaggcttcattagaccaagtgcatctccttggggtgctccggttttgttgtaaagatcggcagtttttgaatgtgcatagactaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="61343" stop="63351"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61643" g_stop="61815" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="0.867"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61816" i_stop="62559" i_length="744">
            <donor d_prob="0.000" d_score="0.88"/>
            <acceptor a_prob="0.000" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62560" g_stop="63087" g_length="528"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="694" r_length="521" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-E353359" ref_strand="-">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>701</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E353359" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="61643" e_stop="61815"/>
          <exon e_start="62560" e_stop="63087"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAGGTAGGATGTCGGTAAATGCTTACGAGGCTAGGTTTCGCGCACTATCCAGATATGCCACCCAATTATGTTTCAGTCCCCAAGATCGAATTCGCCGGTTTGTGAAGGGGTTAAGGTCAGAATTGCGGATTTCGGCCTTACAGATAGCGGCAACGGCAAAATCCTTCCAAGAGGTGGTAGACTTTGTGATAGAAGTGGAAGGAGTAAAGCCAGATGACTTCACTACGACATCGACATCAAAAAGGTTTCGAAAGGGAGGTGAGTTTAACGGTACTTACACTAGAGGACAGGGTTCGGGAAGTTACTAAGTCCGACCAATTCAGTCTTCACTACAGACTGTAGTTGGGGGTCCACCTCCGACCGGTCAACACTTCTCTGAGAGACCTATGCATGAACCCAGAGAGTGCTATGGATGTGGGGAGATTGGACATATTAAGTGATATTGTCCAAAACAGAGTTACAGACCTCCAAATGTTAGAGGTAGAGGTGGTCATGGTAGAGGCCGTTATTCTGGAGGACGTGGTGGTCGAGGTAATGGTGGTTACCAGAACGGCCGAGGTGATGGGCAACCTGGAGCCACTACATCACAACATGGTAGGGGCAACGAACAGACAAACGATAGGGCCCATTGTTACGCTTTCCCTGGGCGGTCTGAAGCGGAGGCATCTGATGCTGTCATCACAGGTAATCTTCTGGTTTGTGATTGCATGGCTTCTGTATTGTTTGATCCTGGATCCACGTTTTCTTATGTATCTTCCTCATTTGCTAATGGTCTAAATTTACATTGTGAATTACTTGATATGCCTATTTGTGTCTCTACTCTGGTGGGTGAGTATGTGGTAGTTGAAAAGGTATATAGGTCTTGTTTGGTAAACTTTGTGGGGAGCAACACTTATGTAGATTTGGTTATCTTAGAAATGGATGATTTTGATGTGATTCTGGGTATGACTTGGCTTTCTCCGCAATTTGCAATCTTGGATTGTAATACTAAAACGGTGACGTTAGCCAAGCCTGGGACAGACCCGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTCCGCATCGTCTCCTTTCTTCGTGCTAAGAAAATGATTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTGAGTCGGTTTCAGTAGTTCGTGAGTTTCTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCGGATAGGGATATTGACTTCTGTATTGATCTCGAACCGGGCACACGCCCCATTTCTATACCCCCTTATAGAATGGCTCCCGCGGAGTTAAGAGAGTTAAAAGCACAACTTCAAGTGTTATTGAACAAAGGCTTTATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGGTTTTGTTTGTAAAGAAGAAGGATGGGAGTTTTCGAATGTGTATAGACTACA</genome_strand>
        <mrna_strand>GCAAGGTAGGATGTAGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCCAGATATGCCACTCAACTTTGTTTCAGTCCACAAGAGAGGATTCGTCGTTTTGTGAAAGGGTTGAGGTCAGAGTTGCGGATTTCAGCGTTACAGGTAGCGGCTACGGCAAAATCCTTGCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGTTGACTTCGATGTAATTCTGGGTATGACTTGGCTTTCTCCAAATTTTGCAATCTTGGATTGTAATGCTAAAACCGTGACGTTAGCCAAGCCTGGGACAGATCTGTTAGTGTAGGAGGGTGACTACACTTCCAATCCGGTGCGTATCATCTCCTTTCTTCGTGCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATAACACTACCCAAGTACCTTCGATTGACTCAGTTTCAGTAGTTCGTGAGTTTATGGATGTGTTCCCTGCAGATCATCCTGGTATGCCACCGGATAGGGATATTGACTTCTGTATTGATCTCGAACCGGGCACACGCCCCATTTTTATACCCCCTTATAGAATGGCTCCCGCAGAGTTAAGAGAGTTAAAGGCACAACTTCAAGAGTTATTGAACAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGGTTTTG-TTGT--A-AAG-A--TCGGCAGTTTTTGAATGTGCATAGACTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E244046" ref_strand="+" ref_description="SGN-E244046 [cLEE-1-H7]">
      <seq>aaacacgaataggcatatcaagtaattcacaatgtaaagttagaccattagcaaatgaggaagatacataagaaaatgtggatccaggatcaaacaatacagaagccatgcaatcacaaaccaaaagattacctgtgatgacaacatcagattcctccgcttcagaccgcccagggaaagcgtaacaatgggccctatcattcttatgtctgttgcccctaccatgttgtgatgtagtggctccagtttgcccatcacctcggccgttttggtgaccaccatttcctcgaccgccacgtcctccagaataacggactctgccatgaccacctctacctctaacctttggaggtctgtaactctgttttggacaatatctcttaatatgtccaatctccccacacccatagcactctctgggttcatgcataagtctctcagagaagtgttgaccggtcgaaggtggacccccaactacagtctgtagtgaagactgaattggtcggactgagtaacttcccgaaccctgtcctctagtgtaagcaccattaaactcacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="62760" stop="61602"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62460" g_stop="61902" g_length="559"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="559" r_length="559" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E244046" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>559</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E244046" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62460" e_stop="61902"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACACAAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAACGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGTTCGTTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGGTTGCCCATCACCTCGGCCGTTCTGGTAACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAACATTTGGAGGTCTGTAACTCTGTTTTGGACAATATCACTTAATATGTCCAATCTCCCCACATCCATAGCACTCTCTGGGTTCATGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCGGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTTAGTAACTTCCCGAACCCTGTCCTCTAGTGTAAGTACCGTTAAACTCACC</genome_strand>
        <mrna_strand>AAACACGAATAGGCATATCAAGTAATTCACAATGTAAAGTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAAAAGATTACCTGTGATGACAACATCAGATTCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCATTCTTATGTCTGTTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGTTTGCCCATCACCTCGGCCGTTTTGGTGACCACCATTTCCTCGACCGCCACGTCCTCCAGAATAACGGACTCTGCCATGACCACCTCTACCTCTAACCTTTGGAGGTCTGTAACTCTGTTTTGGACAATATCTCTTAATATGTCCAATCTCCCCACACCCATAGCACTCTCTGGGTTCATGCATAAGTCTCTCAGAGAAGTGTTGACCGGTCGAAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTGAGTAACTTCCCGAACCCTGTCCTCTAGTGTAAGCACCATTAAACTCACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E356257" ref_strand="+" ref_description="SGN-E356257 [cTOS-20-J8]">
      <seq>aaaacacttagaaaatctgaaattgggtactgaaaatcgactctctgaacttcgtgacggaatgacaggacggaccatcacaggcgtgacggaccgtcatagattgttcagtggaaattgactctctgacccttgcgacgacctgcaggacggaccgtcacagtcacgacggcccgtcacaggttgcgcaaatcccaggcagaatcggatttccttacacgttttaagggacgtttttggactattctttccttaattatagatttcgtgggtttatattaataactcaaattcttggggttaaaagaggtaaccctaagttaattagtggggtattattgccatcttttattcttaattatatgttaatttggggtaaaagaaagagggttttgaaacgagaccctgcgatggtccgtcgtgcccatgacggtccgtcgtggggtccgtcgcttctgccagtttttccagaaataaagtctgctgctcaaaacgactaaacgggtcgttacattatttgactctatcactttaattttctagttaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="65618" stop="81246"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65918" g_stop="66305" g_length="388"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="389" r_length="389" r_score="0.928"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66306" i_stop="80810" i_length="14505">
            <donor d_prob="0.000" d_score="0.81"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80811" g_stop="80934" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="390" r_stop="513" r_length="124" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-E356257" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>512</cumulative_length_of_scored_exons>
        <coverage percentage="0.934" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E356257" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65918" e_stop="66305"/>
          <exon e_start="80811" e_stop="80934"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACACTTAGAAAATCTAAAATTGGGTACTGAAAATCGACTCTCTGAACTTCGTGACGGAATGGCAGGACGGACCGTCACGGGCGTGACGGACCGTCATGGAGACTTCAGTGAGAATCCACTCTCTGAACTTTGCGACGACCTGCAGGACGGACCGTCGCAGGCACGATGGCCCGTCACAGGTTGCGCAAATCCCAAGCAGAATCGGATTTCCTTACACGTTTTAAGGGACGTTTTTGGACTATTCTTTCCTTAATTATAGATTTCGTGGGTTTATATTAATAACTCAAATTCTTGGGGGTTAAAAGAGGTAACCCTAAGTTAATTAGTGGGGTATTATCGCCATCTTTTATTCTTAATAATA-ACTAA-TTAGGGTAAAAGAAAGAGGGTTTGAATAAGAAAAATAAGAAAGAACAAAAAGAGACAGAAAAAGAAAGAGAACGAGTAGAAAGAGAGAGAAACGAAGAGGATAGCAAGGATTCTGAGAAGATAGCTTGTTGATTTCAATTCTTTGGTGGAGGTAGGTTATGGTTATTTCATGCTATTCGTAGTAAACTCTTAATAGTGAATGATATGTGTTAGTAGTATTGTAAACCCTTCTATATGCTTAATTGTATGCTTGCATGAATGATGTGATTATGTAATTATGAATAAACAAGCATGATGAAGCTATTGAATCCCAAATCTTGAAAAGAAACCCTAATCTACTTTGATAATGATGATGCCTTGGTATGAAAGAAGGCTTGATGAATGAAAGTAGTGAGATTAGGGGATCGGGTGTCACGTTCCGGTACCAGGATAGAATATGGATCGGGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATATGGATCGGGTGTCACGTTCCGACACCAGGATAGAATATATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGTATATGAGGATTGGAGTGTCACGTTCCGACACCAGGATAAAATATGGATCGGGTGCCACGTTCTGGTACCAGGATAGTATATTGAGGAGCGGAGTGTCACGTACCGACACGAGGGGAATAAAGATAATGAATCTTGAAATATGATAATATATCCAATCTAATGAACTAAATTCCCAAATGAGTATGATGAGGTGGTGTGAGTCCTCATTGATGTGCTTGGTGTTGTAACCAAGGGTTATGGTAACTATAAATGCTGCATGTTAAGGATATTAGTTGATTTTATGATATTGCTTAATACATACTGTTCCCTATTTTGAGTTGACCGATGATATCTACTCAGTACCCGTGGTTTGTACTGACCCCTACTTTTATGTTTTCTTCTGGTTATTTGTGGAGTGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCAAGCCAGTCTTCGTCACACCGAATCTTCAGGGTGAGCTAACGTGTCTAGCTTGGACTGGATCTTCTCCTTCATGTCTTGATGCCTTGAACCTCCGGCATGGACTAGCTTCTTATGTATTTTTAGCTTTTAGAAACTCTTAGAATTAGTAGTTTAAAGTAGATGTTCTTGTGATGATGACTTCCAGGTTTTGGGAATAATAGATGTTGAATATTGATAGTTATTGAATTGGTTTTTATTAATGAGTTTAAGTCTTCCGCATTATTTTCTGTTGATGTTACATTGAAATGTTAAGGTTTAGATTGGTTGGTTCGCTCACATAGGAGGGTAAGTGTGGGTGCCAGTCGCGGCCTGGATTTGGGTCGTGACAAGCTCTTTCGTTTCTTGAAATGCATGGGGCCTAATCGATTAAAACAAAATTGATTTGGGGAGAGATTATAGGAGAAGTTGAAAGAAAATGGAAGAGAAAAATAGTTGAATCATAGCATCAGTGAGAATTTTGGCGATAAAATGATTCGCACCAAATTTGTGTGTCTTGTACGTTGTAGTTTGTGCGGAGATGTTGTGACATGAATGGAGACATGTACTCTGGATTTTCATCGGAAAAGATGCGATAGTTTGATGTAGAGATCGGAGCAGATGAAATGGAGCACTTCCATTTTTGTTCTGCTTTATTTTGTTTTTGCTCGTTCAATGCATACCACTTTTGGGTATGTTATGTATCCTTTTGTTTTATTAAATAAATGACCCTTTATTGGGTTGCTTTAAAAAAAAATCTTTTGTTTTGTGAAAAAAATTACGGGTCCTAAATAGCAAAAATAGTATAACATTAGCTGCGTATACAAATATATGAAATAGTAGCTATAAAATTTATTTTAATTTAAATTTTTGCTATTATGTACGATAGCAATAATTCATACAAGACAAATTCATATGATGAGATACGTGATTGATCGACTTTTGATGAAAGAAATTTATTTCTTCTACAAAAGGGATGTGTTATAATGGAAATTTTGATAAATCATCCTTGGTGACACAACAATAATATGGATAAAATATTGGTATGAAGAAAATAATGAAATGTACTATGTTTATATCACACGTGTCAGCAATATGTTATGACAATCGAACAAGTTTAAATTGTTGGGGGTCCTCAAATATAATGTTTACTAGGAGTTTGTTACTAGAAACCCTCTTTATGCTAATTAGCATTGTAGTTTCCACGTCATGGGAACATCGAATAAACCTATCTTCCTTTGTGAAGGAACACCTCTCATTGTCAAGTTCACTCGGTGCTAATCTAAATTTCCTTTTTGAAGTATCTTTAAGTCTTTCTTAACATTAATTTATAACATAGGTCTTAGGAGTTTAACCCCTCATATAACATGTTCATAGCTCATAGTTTTTGGGATGACAAAACCCTTTGATCACAAACCCAACATCATGTGAAAACATTACTTCATGACATAGTCATAAGATGTACATGAGAATTACCTTCAATCCCTCATATTAGCATACCTATCATAATATTGCCACCATCATATTCATAGCATGATCATACATTCATAATTTCATCATTCATACTTCAATTAATCAACATTACCAAGGATAAACCACTAATACTACTATAGAATGTTCATGACCTTGAAGATCTTACCAATGGTCTTCAAGAAACCCTTTCAAGACTTTATCCCAAATCCATGATATTTATCCATAAAATCAATTATCATCATTGTACAATAGTTAATTATAAAAGAACATACTCAATTACATTACCTTTAAACATTAATCAACATAATTCAAGAGTTAGGGTTAAGAAAAGAGGGACATTCATGGGTCTTCAAGAATTGGGTCAAAAACCTAAGGTAATCCTTCAAATCAATCATAAAAATTCTTAATCCATCATTATTAATCAAATATATACCAAATGAGTCAAGTTTAAAGGGGACCAACGAATTTGAGCGATTTCTAGGAAATGGGAAGAACATTGAGAAATCAATATAAAGGAACCTTTTGTGGAAAGAAGTCCCAAGAGTGGAGAGTTCTCATACATTATCAATCCTTAAGGATTAATGAATAAAATCCTTGTTCTTGAGCCCTAATTGAAGCTTTGACCTTCTTCTTCGATGGAGTCTTTGTGTAGTGAAAGAGAATTTAGAGAGAAGCTAGAGCAATTGGGTTTTCAATTTGGAGATTTGTTTTGGTATGGGAATGGGTGTAAAATGAATTAAGTTCAATATATACTAAGCCCCTAAATACCAAAAACACCCCTCACTTGGTTGGACCTTTTAATTAGGTCTAACTTGACTTTTATTTTTGGTGTTTTCATCGCGGAACAAGTTCGTGCGGAAGAGGTGTTACCTGGAGTTTCTGGAAATTAATTTTTGGATAGAGAGGTGCGTGAAAACGTCCACGACACGCACCAACATTTTGGATTTTGATGGAGCTAGTCCGTGATGCGGACACACTCCTTCACTCACTGGACAAGCTGTCCTGTCCAAATGTTTGGGTCCTTCTCAAGGATCCCTAGGGTGGTCCTTGGGGGGTTGCACCCAAACATTTTGATCCTAAAAATATTTTTTACCTATTTAAAGCATTTTTAAAAGTTGTACCCTTCATACGACACTCCCAAACCTTCACAAGACCTAAGAACACCTATTGGTTCAATTTCACTAGTTTCTAGACGTCATGGTCGTTTCTCATGTTTAGGCTCTAATACTTCAAAACAAGTTAATTATGTTAGTATAGGTCCTATAACATCATTTTTACCATTTTTAAGTTATTAAACTTCATTCAAATATCTAGCTTAAATAATTAGAATTTCTGAGGTGTAACAGACCTGCATCATGAAAACAGATGCAAAGTTTAATATGAGTATCAAAACAACAAGTACCTAGTAGGCATCATAAGCGACTGAGCAAGGTAAAAATAGACGGAAAAGTAGAATCAAACACAAATAGAGGTTACCATAAATAAGAGCAGAACAATCAGAGAGATAGTTTAAGGATATTTAACATAAACTCAGCTACACCCCCCTTAAGACCCTCTAGGTACACTCACGCACAAACAAGCAAGAATTCAAAAAGACTCGCATAAGCTCGACAGGTACACGGAGAAGCCAAAACTACGAAATGCAACTCCAAACCAACACAACTAACAACTTCAACCTAGTTAACAAGTCTCACTTCAACATCAGGCCACCTAGACCTCAACAACTCCGAGGCATTACCTAGTCAGGCGAGTGTCACATGGGAATATATCAATCCCCTTCAAAAGCCATAATCCAACTAATAAATAGGCAAACACTTCGAGGGGATGCCTAAACCATCAAAGTTTGCCATTTAACACTCTTGGGGGACTTGCCCTGGCCATACAAAGTGTGTGGGGCTGTCAACTTCGAAGAAGAGCTCAAGTAACTTATATCCAACTACCCAACCAGCTAATCACTTCAAGGGCCTTGTCCAGTGCCAGTCAGGTGAGTCAGTTATCACTTCCGGGGCCTTGACCAATCCTTGACAGAGAGTGCGAGTAAAAACAACTTCTTAGAGGATTTAAAATTCCAAACTATGGTGGATCGACGTTCACTACCCACTACCTTACACCAGAACCGACCATAACTCACCCAAACCAAGAAAAAACAATGCCTCTGATAACTCATAGGCAGCACAAAAATGAGAGACAAGCCAGAAGGATCACAATCACTAAAAATACCAAATCTAGGGTCAACTATCATACAAGAATCTGCTATGCCGGTCTACAAGGACCTTGCCCATCAGAATCAACATCGAAGATATACAAAAGTCAACCAGGTGCATGGTTCTACGACACTAGTTTATTCTAGACTAAGGCCAAAGATAAATTCCAATATAAATAAATAGCCAATTAGATATTATGCATGTAACGACAAATAAACAACCCAACAGGTAATTCACGAATACCCAAAACTGAACAACCCCTCCAACAGCATAGTATTAACCCAAAACAACATGAAACCAAACCTACAACATAGTTTCTGAGAAGAAGATAAGAAATACTAGCAGCCCACTCCAGATTCACACAATTCAACATGCATTTACACAATCATGCTCAATCTAAATGAGAGGAAGTCGTAGCCTTACTTGAAGGTCGACCGCGTGCCTTCAAATCACTATACACGAGTTTTCCCCTTCTAGACGACCTCATATTGCTGCCACAATATCAAAAATAGATTCACAACATCAACACGATCATTTAGAAAATAGAATCATCGAAATTGGATATAAACCAATTTAAGAGTCAAAATCGGGAAATATGGGACCCGCTCTCGAATTTCAGAAATTGACTTCGTGAAGAGGTCCTAAACTCTCCCCTTAGCTTGTCTTCCAAAATGAACTAGATATGTTTACCTCCCTTAAATTTGACATTTCGGACTCAATGGTGCATCATAATTTCCATATGAGGTCATTTCGATAAAAAAGTGTACCCCACACCCAAATGCCATTTTTAGCCAATTTTCACCACGGGCCTCAAAATAAGATCGAAATCCCCAAAAGCACACGAAGGGTCATTCTAGATCAAACTAGACATTTCAAAACTAACCGCGCTGACAGAATTTTCATCCGAGCGCATTTACCAAGAATGTTGACCAAAGTAAAATTTAAGCCAAAATTCATAGACTAAAGCCCCAATGGCCCCAAGTCACAACGAAAGCCTCGAAACTCATACAAACCATGCTACTAGCCTAATTTAGCCGCTCTAGAGCTGATGCGATTGTCAGAATTCTCATCTGAGGTCGTTTACCTAAGTTTATGATTGAAATTAATTCTTCAAGTTTCAAAATCTCCAAAATAGGAAAATGAGCATAAAACCCAAACAAACGACCAGTCGACGGAAGACTTAGTGCCACCAATTCATAAATGACTTTGGGTCGCCACAAGAATGCTCTGAATGACGAGAAAATGGTATTAAGGCAAAAATGACCTGAATGAATATTACAACCTCTTAGGGTCATATACGTCATGTCACGTCTAGGGTATAATTTGGGTCATGACACATGTGTACCATAGTTAGTCAGCATAAGAATTTGCTTGGAACCATTAATGATTTTAAATATTGGTCACATCTAAGGTGTAGACTCATGCCGTGACATATTTTTTTTGTGAATCATCATAACTACATAAATCTTAACAAATAGGTGAAAAAGGTGATGATAAAGTTTAGGGAGATCATAAAGGTAGAATTAGAGGATAGGGGTAGAAGATGGTTGGGGGAACCCCCAATGTATCTGTCAATGTTTTCCATAAATCAAGCTTTCACAAAAAAAATTAGGGTTGAAAACATGATTGAAGACAAAAGGAAGAAAAGAAAGGAGGAAAAAAATTCAAAAAATAATAATTTACTAGTGAAATACACGTGCACATATCTGGTTATGACGTTTTAAGGGGTTATATATTTCAATTTTAACAAGTTTGGGGGGGGGGTAATATGTTAGGTGGATTTGATTATTTAAAGGTAAGTATTTGTAAATATGAATATAGGTGTGCGGGGGGGGGGGGGGGGGTTGACTATTTTCTCTATTAATAGTATAGAAATTAGTTACCAAAAAAATCTATGTATTAGTTATATAAGTACTAGTTATTTCACATTTTATGCTGCATAAAATAAAAATAGATTGCCTCATAACTTATACACTTACTATTTATGCGGGTTTCTAAATTTTCAATCGAATATTTATTTATATCACAATAAATAACTTACTTTCTATTTATCTAGGGAAAAGGGACAGATATATCCCCGAACTATTGTAAGTGGGTATAAAAATACCCTTCGTCATACTTTTGGACATTGGAGCCCGTGTCGTCATACTTTTTAGACATTGGTGCCCTTGTCGTCATACTTTTGGGACATCGGTGCCCCTGCCGTCATACTTTGAGGACATTAGTGCCCCAATCCCTTCGCTGGAGTGAAGAGCATATATGCTCTAATTTATGGACGACAAGGACACCAATGTCCCAAAAGAATGATGGAGGGTATTTGCATGCCATTTACGGTAGTTCGAGGGTATATTTGTCCTTTTTTCTCATTTATCTATCAAACGTAGTATAAGTTATATGGATATTAATACATGAGTAACTTCGTTTTTTATCCTATTAGACGACCTCAAATTTAATGCTCACATAACTAATAAGTGCATAAAATAATGATTTTCTCATAATTAATCCCTACATTCTTTTAGAAAGAAAAAAAAGTATGTGCCGTTTGTATAGATCGAGAGTTGTAGCTTGATTCGTTACTCATTCCATATCGGGAAGAATTGCAGGAACGATATATAAGAGGGAGTTAGAGCACATAACAAGTAACATGTGTGCTATACTTGGAATTGTAATTGAGCTTGAGGGCATCGATGTCATTTCAAGCTTCCACTTTATGGCTTGATGCTTTGGGGATGTTGCACTAATTAGTATATTGTTTGTATCTTCTCCCTTATGGGGAAAAATGTGCTATATTGTGGTTTATTTTTGCTCTTATCTGGGCCCCACCTACGTTCGTGTTCAACTCTTTATTTGACTATTATTTAATTACTTCAATTCCAATTAAATCAAATTGTCTTATGCTTTCTAGTATTTACTCCGTCCACTTCATTTTAATTATTTTAAATTTTTAAAAATGTATTTCATGTTTAATTTAGTTTTATTAGCATATAATTTATCCAAGATTATATAACCCATTTTAGTTATGTCATTTCATTTTAAATTCATATCTTTTCATTATAGATTTATTATTTTGAATGTCTTAATATGTGTGAAAATTTATAACTATTTGAGTAAAAATTATCGATTGATGGAGGAAAAAACAGCAATTATAGACATCTAAATGAGAATCCTCACATTAAATTTCTGAGGAAAAAGAATGAGGTGATTTTAAGAACAAAAATTCAAAATCATTTAACTAGTGAAAGTTAAAATTTATTAATATTGCTAATATTTATTTAACACTTAATAAAAAATTTAAAATTATTTAATTAATACTACTTGAAAATATAATTTATCAATAACTTAGTGTTCTTCATAACTAGTTGCTAATATATGCATAACTCTAACCAACTACCAAATGACCCCTTACTTAATATGAACGATATTTTAGAAAACTTAACATTCATTTTTATGAGACTTAGGCCTCAATTGTTTGCACTTGATGAAAATCTGAATTTCAATGCTTCAAATATTAATTAAGTGTTTTTATTTTTTTCTATTTTAAAATTTATTAATGGATCTGAATGAATCAGATATGTGATAGGATCTTAATCTTATTTAGACTTTAAAGACACTTTTATTTTTTAAATAAATTGTGCTCTATACTATTTTTTTCAAAAAAAAAAAAAAGTTCAAAGTCTCTCTACTTCTCCAACTTTATCAATTATCCAAATTCTTTTCAACCTTTTAATTTTTGTTCTTGCTTCTTGTTTATCAAGAATTGATGAAATTTATTTCATTGGATTAGAGTGCAAAACCACTTCATAAAAGCATGTGTTGTTGAGATTTTATAAATTTGTTTTAAGCCATTTGAATGTATCATGCTAATTATTTATTTTAGAGAAGAGTACATGGGCAAATACATTATAGAACATACATGTTTCACTTATTTATTCAAGATTAATTTATGTTGATTTTTTTAATAAAAAAGATGGCTAATATCTTTTTTAACAATTATAGTTAATGTAATACTTAATTACTATTTTATTTGAATTAAAATACTTATTGTGTTAATGTAATACTTATAGAGAGGGGGGAGGGGGGGGATTTTAATTATTTAAATGAACATTTAGATTAAAATATTTTAATCTTAATAAAAACAAATGAGGCATTACTTATATTTTAAAATAATATTTTATGTAATTTGTTTACTCTTTATATTTATATTTATACTAGTTAACATATTCGCGCTTCGCGCGGACATTAATAGATTTATGAATAATTTTTTTTGATTAAATATATCGAGTCAAATATTATTATCATTAAACCCAATAATTTATATTTTTCAACTTGTTGTTCACTATCTATATTTTTAGTATTTTAAATATAGTTGATTTCGTATAATCTATTTTGTATGTTATCTTTAAAAACATGTAAAGAAAGAAGAATAATTTCATGAAAATTTTCTTTTTGTTTATGCGGCTGTAGTAAATTCTAATTATATTTTAGGAGGGAGTTAAATTATACAGTGTTCATAAAAATATATTAATAAAAAAAGTTACTCTAAATAAATTGATAACCGACAATTTAATAAATTAGAAAACATATCATATATAATTCCTAGAGTGGAAATATACAACTAATTTCAAGTCATACTTATCATATTATTTTATCTAAAATAATTACATCTTTTAGAATCTATTGCTTGTAAAATAATAAAAGGTTGACTTTTATTTTGGTGAAAATCATCTTCGGTATATTGAGAAATCATGTCACACTACATAAGCAATTCAATAGGAGCATCATATTTTCATTATTCAACTAACAATATACTCTACTTAATTTTTTTAATTTAACATAAATCTAATATGAAAAGCAAACATTCAATATTTTTAAAAAAAATAGCAACACAATAATTATTATTACAGAACGGAAAAAAAAGCAATTGTTGCAATATACCAAATTGTTAATAAACACTTATAAATTTATAATATATAAAAAAATACTAATAAAATACAAAAACTCTATAGAAAATCTCTTCAAAATTGTTACTTTTAGCAACTAAGTAAAATAAGAAAAACTATATAACTTGCACATTAATTACTTTAGGGGGTTATCCACATGAAAGGTTTTGAAGTCATGAATATTATTAATTAACAATTAACAATTAAAAATAAGTTACATATATAAAAAAATGTTAATTATGCAAAATAATACAATTAAGTAATTATTTGGAGAGGAAATTTTAAAAATATATTTTACAATATCACACTGGTGAAGAAAAATAAAAAACATGTTAAATAATTTAGAGAAAAGATAAATGCGATCGGAGGTGATAGAAATGTACCACGTCATCTTATCTATTTCTAACATTCTAACTTTATATGTAAATAGATATATTGGTTGTAAGTAAATAATAAAGAGAAAATAACTTAAAATATTTTTTTAAAATTGTTATTCTAAAATTATAATCAGAAGAAGGTCAAAAAAAAAGAAGGAAAAGAAAGTGGAAAATCAATCTATTAGGATTGGAAATTAGATGTGAGTTATGGATGATTATTATTTACTCCTAATAAAGTAGTATGTGAATTTTTTTTTATTGTAAATGTTTCTCTATTAATAAAATTTATTTTTAATTAATTAAGTAAATTACTTTTACAAAAGTTAATTAATTTAAATAAGAAAAAAGGTCAACAAAGACAAGATAAATGTCACATCACTTTCTTTTATGTTTCTCATTTTCAATAATTAAGAGAAGTTAAATAAATTACACTTTTTAGTTTTAATATAATTAATGTGACTAAGGGAAAAAAATTTCTTCATTCTTTTCATTAAATAATTTATTTATTCATTAAATTTTTTAAAAGTACTAAAAAATGATTAATTTATTTTTTGTTTAGTCTATGACTATTTTTTAATATGATAAACTACTTCATATCATATATTTTTTAGGGACATCAATATGCAATAGCTATAAGAAATGTATCATGTGCAATATTATATTTTTCAACTGTAACAAAAATTAAAATATTAATTAGAACTTGACGAAAAAATTACATAAAAATAAAACTATATAACTTTTCATCTTCATTCATTCACATAATAATAATAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAATAATAATAATAATAATAAGAAAAAGAGCAAAGTAAAATGAAGAAAATAATGTTAATTGAGCTTTCTAATGTGTTAATTAGTAGAGTTTCATAATTTATTTTTTGTTGAATAACATGAAATTATATATCTAACTAAAAAATATAATCAAAACAATACATGAATGAATTAATCTTCAAAATATTTGGAAATCATTCAAACTTTTTTTTACTAATATGACCATCTTCTTGATGAAATCTTGAAATAATTATGATTCCTTCTTCATTTTCATAAACTTGTACCAAACTAATGCAAACATCAATTTGATGAATCTTGAAGAATATATCTATGATCTTTATCAATATGAAGATCATGTGGTGAACTTATTAAGTACATGATTGATGAAAAAGATGAAGAAAAAAATGTAAAAGAGGAAAAAACTATACTAATAAAAAGAAAGAATGAGAAAATGAGAATGATCATTGAACATAGATAGTTGTTATTTATAGTTTGTGTAAACCATAAGAATAATTAAAAATAAGTTAAAAAGACATATTATTTAAGTAGGGAATATAAATAGATGGAGGTTTTATTTTAACTTATTAGGTATAATTAGAATAATAAATATGAATGAATTTTTTAATTAATAAACAAATTATAAAATGAAAAGAAATGAAAAAAAAAGGAAAAAAAGAAATTGAACAGCTCCTCTATGATCCTCATATATATATATATATATATATATATATATATATATTGATTGGATTTGGGCTAAGTGGAGAAAGCTTATCATTAATTACTGAAATTTGTGTATAGTTTATGTCTCTTAAAATTTATGCACATTTTAACTAATAAATATGTGGTCAAAATATCACTGACACAAAAGTAACAAATAACTTTTTGTGAATCAAATATTTCTGTATCATAATTTCTCACAAGACATGTTATAAAAGACATAATAAATTATGTCCTGATACCAAATAACAAAGAACTTTTTGTAGTATACATTTATATGCTTTTACTATTAACATCCCACAAGTTATTTAATTTTACTTTTAAAAAACAGGCCTACACATACTTTATAGTTCCACATTAGCTATCAATATTTTTTCTCAAAAAGAGATAAATAACATACATCTCAAAAGTCAAACTCGTGTTACAAAACACTATGACAAATTCTGAAAAATATTACACAACTTGTATCGAGTGAGATAATAATTTTTAAATCTATCGCGAGCAAATTAGATCGAAATAAATAAGTGTACTTTGATCTATAATATTTTGATTAAATGATAACTAAAGAAAAAAACTAAAGATCATTAGATTTAAGGGTGAAGTCAAAGACCAACCCAAAATAAGGACAGTCAATGCAAAAACTTAAATTTCAAGGTTACTTACCAGTATGCATAAAAATGATTCTATTGATACATTCAGATAATTAACCATTTCATAATTAGTAAAAAAATTTATTGTTATAACCACAAAAATTCTTTTCAACAAATGGTTATATGTATATGCAATATATCAATATTTATTCATAACCTATTTATATTGTATAAACAGTGTATAATCATATATAAATGATGTATAGCTGTGTATAAGAGATGTATATAGATGTGAACTACATTATTTATACAATATTTATACATTACATATCAATCTTTTTCATCTCAATCACCTTTAATATCCACTAAGTAATCCCAAAATTTTGATATGAGCTCCTTTCAATATTTTGAGTCTTTTGATATATTATTTTCTTGAAACGATATATATGTGTGACACATTAATTTTGAAAATGTAAAAGAAGACGAATGAAGGAGAAAAACATCTACGATATAAGGAAGAAGGAGGAGAGAAGAAATATGTCACGACCCAAACCGGGTTGCGACTGACACCCACACTAACCCTCCTATGTGAGCGAACCAACCAATCTAAACCTTAACATTTCAATGTAATATCAACATAAAGTAATGCGGAAGACTTAAACTCATTAATAAAAACCAATTCAATAACTATTATTTCCCAAAATCTGGAAGTCATCACCACAAGAACATCTATGATCAAATTACTAAACTAAGAGTATTCTAAGAAGCTAAAACAAATAAAAGCTAGTCCATGCCGGAACTTCAAGGCATCAAGACATGAAGAGGAAGATCCAGTCCAAGCTAGAAGCATTAGCTCACCCTGATATCCGGAGTAATGAAGACCGACTAGAGTTACTGTTGAGTCGAAGATGACGGCACGTTTGCTGCACTCTACAAATAAACAAGAAGAAAACATAAAAGTAGGGGTCAGTACAAAACACGGGTACTGAGTAGATATCATCGGCCAACTCAAAATAGAAATCGATATATACCAAGTAATATCATAAAATCAACTATGATACTCAACATGTAGCAACAACAAGCACTATATCATTAACAAATACCATTAAGTTCACACATGAGGACTCAAGCCTCAATACCATACTCATTTGGGAATGATGTTCATTAGATTGAGTATATTAACATCTTTCAAGATTCATTATCTTTATTTCTCTTGTGTCGGTACGTGACACTCCGCTCCCTCATATTCATTAATCCTTTTGTGTCGGTAAGTGACACTCCGATCTCCTAAATCTACGTGTCGGTTCGTGACACCCATTCCCCTAAACCTACGTGTCGGTTCGTGACACCCGATCCCCTAAATCTATGTGTCGGTTCGTGACACTTGATCCCCTAAATCTACGTGTCGGTTCGTGACACCCGATCCCCTAAATCTACGTGTCGGTTCGTGACACCCGATCCCCTAAATCTACGTATCGGTTTGTGACACCCGATCCCCTAAATCTATGTGTCGGTTCGTGACACCCGATCCCCTAAATCTATGTGTCGGTTCGTGACACCCGATCCCCTAATCTCCTTCTACCAATTCATCAAGCCTTCTTTCTTACCAAGGCATCATCAATCTCATTATTTTAGTTCATCACGCCTTCTTTATACCAAGGCCTCATCATTAACAAAGAGATTAGGGTTTTGCAAGATTCGGGATTCAATAACTTCGTCATGCTTATATAATCACAATTATATAATTACATTCATGCAAGCATACAATTAAGCACATAGAAGGGTTTACAATATTATCAATACATATCATTCGCTATTAAGAGTTTACTACGAATATCGTAAGAGAAACCATAACCTACCTCCACCGAAGATTCGTGATCAAGCAAGTGATTTCCCAAGCTTTGTGTTTTTTCCTGTCGTTCGATCCCCTTTCTCGTTCGACTTTCTCTCTCTTTCTCTTGTTCTTTCTATTTTCTTTATTCAAACCCTCTTTCTTTTACCCTAATTACTATATAATTAAGAATAAAATATGGCAATAATAACCCACTAATTAACTTAAGGTTACCTCTTTAAACCCCCAAGTAATTAGACTTATTAACATTAACCCACTAACTTTATAATTAAAGCAGGAATAGTCAAAAATGTCCCTTAAAACAATTGAGGAATTCCGACTCAGAGTGGGATTTACGCAGCCTGTGACGGCCCGTCGTGCCTGCGACGGTCCGTTCTGCAGGTCGTCGCAAGGTTCAGAGACTGGATTTTCACTGAAGACTCTGTGACGGTCCGTCACGCCTGTGACGGTCCGTCCTGCCATTCCGTTACGAAGTTCAGAGAGTCGATTTTCAGTATCCAATTTTAGATTTTCTAAGTGTTTTGAAACGAGACCCTGCGACGGTCTGTCGTGCCCATGACGGTCCGTCGTGGGGTCCGTCATTTCTGCCAGTTTTTCCAGAGTTGAAGTCTGCTGCTCAAAACGACTAAACAGGTCGTTACA</genome_strand>
        <mrna_strand>AAAACACTTAGAAAATCTGAAATTGGGTACTGAAAATCGACTCTCTGAACTTCGTGACGGAATGACAGGACGGACCATCACAGGCGTGACGGACCGTCATAGATTGTTCAGTGGAAATTGACTCTCTGACCCTTGCGACGACCTGCAGGACGGACCGTCACAGTCACGACGGCCCGTCACAGGTTGCGCAAATCCCAGGCAGAATCGGATTTCCTTACACGTTTTAAGGGACGTTTTTGGACTATTCTTTCCTTAATTATAGATTTCGTGGGTTTATATTAATAACTCAAATTCTT-GGGGTTAAAAGAGGTAACCCTAAGTTAATTAGTGGGGTATTATTGCCATCTTTTATTCTTAATTATATGTTAATTTGGGGTAAAAGAAAGAGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................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............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGAAACGAGACCCTGCGATGGTCCGTCGTGCCCATGACGGTCCGTCGTGGGGTCCGTCGCTTCTGCCAGTTTTTCCAGAAATAAAGTCTGCTGCTCAAAACGACTAAACGGGTCGTTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E246710" ref_strand="+" ref_description="SGN-E246710 [cLEF-45-O22]">
      <seq>cacaaaccgacatatagatttaggggatcggagtgtcacgtaccgacacaagaggattaatgaatattgagggagcggagtgtcacgtaccgacacaagagaaataaagataatgaatcttgaaagatgttaatatactcaatctaatgaacatgattcccaaatgagtatggtattgaggcttgagtcctcatgtgtgaacttgacggtaattgttaatgatatagtatttgttgttgctacatgttgagtatcatagttgattttatgatattacttggtatatatattgatttctattttgagttggccgatgatatctactcagtacccgtgttttgtactgacccctacttttatgttctcttcttgtttatttgtggagtgcagcaaacgtgccatcgtgttcaactcaacagtaattcaagccagtcttactacatcggaaattcagggtgagctaatgcttctagcttggact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="80050" stop="78973"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79750" g_stop="79273" g_length="478"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="481" r_length="481" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E246710" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>478</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246710" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79750" e_stop="79273"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACGAACCGACACGTAGATTTAGGAGATCGGAGTGTCACTTACCGACACAAAAGGATTAATGAATA-TGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAATGAACATCATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTAATGGTATTTGTTAATGATATAGTGCTTGTTGTTGCTACATGTTGAGTATCATAGTTGATTTTATGATATTACTTGG--TATATATCGATTTCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTTTCTTCTTGTTTATTTGTAGAGTGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCTAGTCGGTCTTCATTACTCCGGATA-TCAGGGTGAGCTAATGCTTCTAGCTTGGACT</genome_strand>
        <mrna_strand>CACAAACCGACATATAGATTTAGGGGATCGGAGTGTCACGTACCGACACAAGAGGATTAATGAATATTGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAATGAACATGATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTGACGGTAATTGTTAATGATATAGTATTTGTTGTTGCTACATGTTGAGTATCATAGTTGATTTTATGATATTACTTGGTATATATATTGATTTCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTCTCTTCTTGTTTATTTGTGGAGTGCAGCAAACGTGCCATCGTGTTCAACTCAACAGTAATTCAAGCCAGTCTT-ACTACATCGGAAATTCAGGGTGAGCTAATGCTTCTAGCTTGGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E379315" ref_strand="+" ref_description="SGN-E379315 [TUS-1-J2]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatgcgaggaagaggatacttgttctttatggttaccttgttncactgccggtagcctatgcacatccgaaaactccaatccttcttctttacaaacaaaaccggagcaccccaaggagatgcagttggtctaatgaagcctttgctcacaactctttgaagtggtcttttaactctcttaactctgcgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="82774" stop="84086"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83074" g_stop="83786" g_length="713"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="712" r_length="712" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-E379315" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E379315" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83074" e_stop="83786"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACAAATCGGTGGTAGTAGCTCGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTTTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGAATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCCTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCGTCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCGTTCATCAGACTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGCGGTCTTTGGCACATCTGTTGCCCGTATTTTCAATTGATGATAGTCGAATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTATTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCGG</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTNCACTGCCGGTAGCCTATGCACATCCGAAAACTCCAATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCAGTTGGTCTAATGAAGCCTTTGCTC-ACAACTCTTTGAAGTGGTCTTTTAACTCTCTTAACTCTGCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E375319" ref_strand="+" ref_description="SGN-E375319 [TUS-15-F18]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatgcgaggaagaggatacttgttctttatggttaccttgttcaactgccggtagcctatgcacatccgaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="82774" stop="83969"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83074" g_stop="83669" g_length="596"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="596" r_length="596" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-E375319" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E375319" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83074" e_stop="83669"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACAAATCGGTGGTAGTAGCTCGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTTTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGAATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCCTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCGTCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCGTTCATCAGACTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGCGGTCTTTGGCACATCTGTTGCCCGTATTTTCAATTGATGATAGTCGAATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTATTCAACTGCCGGTAGTCTATGCACATCCGAAAAC</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGCCTATGCACATCCGAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E204434" ref_strand="+" ref_description="SGN-E204434 [cLEC-13-J16]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="82774" stop="83899"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83074" g_stop="83599" g_length="526"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="526" r_length="526" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-E204434" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E204434" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83074" e_stop="83599"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACAAATCGGTGGTAGTAGCTCGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTTTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGAATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCCTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCGTCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCGTTCATCAGACTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGCGGTCTTTGGCACATCTGTTGCCCGTATTTTCAATTGATGATAGTCGAATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATG</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E368762" ref_strand="+" ref_description="SGN-E368762 [TUS-22-P2]">
      <seq>gtctcacccaattcttcactgtctcaatcttacaaggatccaccatcactccatccttagaaaccacgtgccccaagaaggacactgcatctatccaaaactcacacttagagaacttggcataaagctttttctccctcaacatttctaatacaattctcaaatgctcctcatgttccttcttactattagagtatatcagtatatcatcaataaacatgatgacaaagagatccaaatatggcttaaaatcccgttcatcaagctcatgaacgcagcaggggcattcgtaagaccaaaagacatcactacaaattcgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagagaagacacaagcaccttgtaactgatcgaacaagtcatcaatgcgaggaagtggatacttgttcttaatagttaccttgttcaactgccggtagtctatgcacatccgaaaactcccatccttcttcttcacaaaccaaaccggagcaccccaaggagatgcacttggtctaatgaagactttgctcaaaaactcttgaagttgggcctttaactctcttaactccgcgggagccattctataagggggtatagaaatggggcgagtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="82845" stop="84123"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83145" g_stop="83824" g_length="680"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="679" r_length="679" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-E368762" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E368762" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83145" e_stop="83824"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTTACCCAATTTTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGAATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCCTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCGTCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCGTTCATCAGACTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGCGGTCTTTGGCACATCTGTTGCCCGTATTTTCAATTGATGATAGTCGAATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTATTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTTTATAAGGGGGTATAGAAATGGGGCGAGTA</genome_strand>
        <mrna_strand>GTCTCACCCAATTCTTCACTGTCTCAATCTTACAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTATCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCTAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTATTAGAGTATATCAGTATATCATCAATAAACATGATGACAAAGAGATCCAAATATGGCTT-AAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGTGGATACTTGTTCTTAATAGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTCACAAACCAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGACTTTGCTCAAAAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E240817" ref_strand="+" ref_description="SGN-E240817 [cLED-24-J5]">
      <seq>gtctcacccatttcttcactgtctcaatcttaccaggatccaccatcactccatccttagaaaccacgtgccccaagaaggacactgcatctatccaaaactcacacttagagaacttggcataaagctttttctccctcaacatttctaatacaattctcaaatgctcctcatgttccttcttactattagaggatatcagtatatcatcaatgaacatgatgacgcagagatccaaatatggcttaaaatcccgttcatcaagctcatgaacgcagcaggggcattcgtaagaccaaaagacatcactacaaattcgtaatgcccatacctggttctaaaagcagtctttggcaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="82845" stop="83803"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83145" g_stop="83503" g_length="359"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="358" r_length="358" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-E240817" ref_strand="+">
        <total_alignment_score>0.936</total_alignment_score>
        <cumulative_length_of_scored_exons>359</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E240817" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83145" e_stop="83503"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTTACCCAATTTTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGAATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCCTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCGTCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCGTTCATCAGACTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGCGGTCTTTGGCACA</genome_strand>
        <mrna_strand>GTCTCACCCATTTCTTCACTGTCTCAATCTTACCAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTATCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCTAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTATTAGAGGATATCAGTATATCATCAATGAACATGATGACGCAGAGATCCAAATATGGCTT-AAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E355232" ref_strand="+" ref_description="SGN-E355232 [cTOS-18-A6]">
      <seq>tcaatgcgaggaagaggatacttgttcttaatagttaccttgttcagttgtctgtagtctatgcacattctaaaacttccatccttcttcttcacaaataaaactggagcaccccaaggagatgcacttggtctaatgaagaccttgctcaacaactcttgaagttgagcctttaactctcttaattcggcgggagccattctataagggggtatagaaatggggcgtgtgcctggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcaggaaacacgtccaaaaactcgcggactaccgaaaccgactcaattgagggtacttgagtagtgtcatccttgagatgtgccaagaaagctgaacaccctttactaaccattttcttagcacgaagaaaggatatgatacgcaccagattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaacgtcaccgttttagcattacaatccaagatcgcaaaatttggagaaagccaagtcatacccagaattacatcaatgtcacccatttctaaaaaaccaaatctacataagtgttgctccccacgaaattcnacaaaacagaactatgtaccttttcaactaccac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="83294" stop="84553"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83594" g_stop="84253" g_length="660"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="658" r_length="658" r_score="0.909"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-E355232" ref_strand="+">
        <total_alignment_score>0.909</total_alignment_score>
        <cumulative_length_of_scored_exons>660</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E355232" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83594" e_stop="84253"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTATTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTTTATAAGGGGGTATAGAAATGGGGCGAGTACCCGGTTCAAGATCAATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGGACCAACGAAACTGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCATTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACGTACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGTATCTGTCCCAGGCTTGGATAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATATACATAAGTGTTGCTCCCCCACAAAGTTCACCAAACACGACCTATATACCTTTTCAACTACCAC</genome_strand>
        <mrna_strand>TCAATGCGAGGAAGAGGATACTTGTTCTTAATAGTTACCTTGTTCAGTTGTCTGTAGTCTATGCACATTCTAAAACTTCCATCCTTCTTCTTCACAAATAAAACTGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGACCTTGCTCAACAACTCTTGAAGTTGAGCCTTTAACTCTCTTAATTCGGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCTGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGAAACACGTCCAAAAACTCGCGGACTACCGAAACCGACTCAATTGAGGGTACTTGAGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTGAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGATATGATACGCACCAGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAATGTCACCCATTTCTAA-AAAACCAAATCTACATAAGTGTTGCT-CCCCACGAAATTCNACAAAACAGAACTATGTACCTTTTCAACTACCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E353359" ref_strand="-" ref_description="SGN-E353359 [cTOS-15-G18]">
      <seq>gcaaggtaggatgtaggtcaatgcatatgaggctaagtttcgtgcactatccagatatgccactcaactttgtttcagtccacaagagaggattcgtcgttttgtgaaagggttgaggtcagagttgcggatttcagcgttacaggtagcggctacggcaaaatccttgcaagaaatggttgacttcgatgtaattctgggtatgacttggctttctccaaattttgcaatcttggattgtaatgctaaaaccgtgacgttagccaagcctgggacagatctgttagtgtaggagggtgactacacttccaatccggtgcgtatcatctcctttcttcgtgctaagaaaatggttagtaaagggtgtttagctttcttggcacatctcaaggataacactacccaagtaccttcgattgactcagtttcagtagttcgtgagtttatggatgtgttccctgcagatcatcctggtatgccaccggatagggatattgacttctgtattgatctcgaaccgggcacacgccccatttttatacccccttatagaatggctcccgcagagttaagagagttaaaggcacaacttcaagagttattgaacaaaggcttcattagaccaagtgcatctccttggggtgctccggttttgttgtaaagatcggcagtttttgaatgtgcatagactaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="85389" stop="83382"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85089" g_stop="84917" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="0.942"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="84916" i_stop="84174" i_length="743">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.021" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="84173" g_stop="83646" g_length="528"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="694" r_length="521" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E353359" ref_strand="-">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>701</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E353359" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="85089" e_stop="84917"/>
          <exon e_start="84173" e_stop="83646"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAGGTAGGATGTCGGTCAATGCATATGAGGCTAAGTTTTATGCACTATCTAGATATGCCACCCAACTTTGTTTCAGTCCACAAGAGCGGATTCGTCGTTTTGTGAAGGGGTTGAGGTCAGAGTTGCGGATTTCAGCCTTACATGTAGCGGCTACGGCAAAATCCTTCCAAGAAGTAGTAGATTTCGTGGTAGAGGTGGAAGGAGTGAAGCCAGATGAATTCACCATGGCATCGACATCAAAGAGGTTTCGAAAGGGAGGTGAGTTTAATGGTTCTTACTCTAGAGGACAGGGTTCCGGAGGTTACTCAGTTCGACCCATTTAGTCTTCACTGCAAACTGTAGATGGGGGTCCACCTCAGACCGGTCAACACTTCTCTGAGAGACCTATGCTTGACTCTAGAGTGTTATGGATGTGGGGAGATTGGACATATTAGGAGAAATTGTCCAAAACAGAGTTATAGACCCCCAATGGCTAGAGGTAGAGGTGGTCATGGTAGAGGCCGTTATTCTGGAGCACGTGGTGGTCGAGGTAATGGTGGTCACCAAAATGGTCGAGGTGATGGGCAAACTGGAGCCACTACATCACAACATGGTAGGGGCAATGGAAAGACAAACAATAGGGCCCATTGTTACGCTTTCCCTGGGCGGTCTGAAGCGGAGGCATCTGATGCTGTCATCACAGGTAATCTTCTGGTTTGTGATTGCATGGCTTCTGTATTGTTTGATCCTGGATCCACATTTTCTTATGTATCTTCCTCATTTGCTAATGATCTAAATTTACATTGTGAATTACTTGATATGTCTATTCGTGTTTCTACTCCGGTGGGTGAGTCTGTGGTAGTTGAAAAGGTATATAGGTCGTGTTTGGTGAACTTTGTGGGGGAGCAACACTTATGTATATTTGGTTATCTTAGAAATGGATGATTTTGATGTAATTCTGGGTATGACTTGGCTTTCTCCGCAATTTGCGATCTTGGATTGTAATGCTAAAACGGTGACGTTATCCAAGCCTGGGACAGATACGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTACGTATCATCTCCTTTCTTCGTGCTAAGAAAATGGTTAGTAAATGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTGAGTCAGTTTCGTTGGTCCGTGAGTTTCTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCAGATAGGGATATTGACTTCTGTATTGATCTTGAACCGGGTACTCGCCCCATTTCTATACCCCCTTATAAAATGGCTCCCGCGGAGTTAAGAGAGTTAAAAGCCCAACTTCAAGAGTTGTTGAGCAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGGTTTTGTTTGTAAAGAAGAAGGATGGGAGTTTTCGGATGTGCATAGACTACC</genome_strand>
        <mrna_strand>GCAAGGTAGGATGTAGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCCAGATATGCCACTCAACTTTGTTTCAGTCCACAAGAGAGGATTCGTCGTTTTGTGAAAGGGTTGAGGTCAGAGTTGCGGATTTCAGCGTTACAGGTAGCGGCTACGGCAAAATCCTTGCAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGTTGACTTCGATGTAATTCTGGGTATGACTTGGCTTTCTCCAAATTTTGCAATCTTGGATTGTAATGCTAAAACCGTGACGTTAGCCAAGCCTGGGACAGATCTGTTAGTGTAGGAGGGTGACTACACTTCCAATCCGGTGCGTATCATCTCCTTTCTTCGTGCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATAACACTACCCAAGTACCTTCGATTGACTCAGTTTCAGTAGTTCGTGAGTTTATGGATGTGTTCCCTGCAGATCATCCTGGTATGCCACCGGATAGGGATATTGACTTCTGTATTGATCTCGAACCGGGCACACGCCCCATTTTTATACCCCCTTATAGAATGGCTCCCGCAGAGTTAAGAGAGTTAAAGGCACAACTTCAAGAGTTATTGAACAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGGTTTTG-TTGT--A-AAG-A--TCGGCAGTTTTTGAATGTGCATAGACTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E355244" ref_strand="+" ref_description="SGN-E355244 [cTOS-18-K20]">
      <seq>cggaaactcccatccttcttcttcacaaacaaaatcggagcaccccaaggagatgcacttggtctaatgaaacctttgctcaacaactcttgaagttgggcctttaactctcttaactctacgggagccattctataagggggtatagaaatggggcgtgtgcccggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcagggaacacatccaaaaactcacagactataaaaaccgactcaatcgaaggtacttgggtagtgtcatccttgagatgtgccaagaaagctaaacaccctttactaaccattttcttagcacgaagaaaggagatgatgcacaccggattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaatgtcaccgttttagcattacaatccaagatcgcaaattgcggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaaatctacataagtgttgctccccacaaagttcaccaaacaagacctatataccttttcaactaccacagactcacccaccggagtagaaacacgaataggcatatcaagtaattcacaatgtaaatttagaccgttagcaaatgaggaagatacantagaaaacgtggatcccaggatcaacaatacagaagccatgcaatcacaatcgaaagattacctgtgatgacagcatctaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="83363" stop="84725"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83663" g_stop="84425" g_length="763"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="761" r_length="761" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-E355244" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>763</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E355244" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83663" e_stop="84425"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTTTATAAGGGGGTATAGAAATGGGGCGAGTACCCGGTTCAAGATCAATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGGACCAACGAAACTGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCATTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACGTACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGTATCTGTCCCAGGCTTGGATAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATATACATAAGTGTTGCTCCCCCACAAAGTTCACCAAACACGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGACATATCAAGTAATTCACAATGTAAATTTAGATCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGAT-CCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGAT</genome_strand>
        <mrna_strand>CGGAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAACCTTTGCTCAACAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCTACGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCCGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAAAAACTCACAGACTATAAAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATGCACACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAATGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCT-CCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCGTTAGCAAATGAGGAAGATACANTAGAAAACGTGGATCCCAGGATC-AACAATACAGAAGCCATGCAATCACAATCGA-AAGATTACCTGTGATGACAGCATCTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E351414" ref_strand="+" ref_description="SGN-E351414 [cTOS-12-D7]">
      <seq>cggaaactcccatccttcttcttcacaaacaaaatcggagcaccccaaggagatgcacttggtctaatgaaacctttgctcaacaactcttgaagttgggcctttaactctcttaactctacgggagccattctataagggggtatagaaatggggcgtgtgcccggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcagggaacacatccaaaaactcacagactataaaaaccgactcaatcgaaggtacttgggtagtgtcatccttgagatgtgccaagaaagctaaacaccctttactaaccattttcttagcacgaagaaaggagatgatgcacaccggattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaatgtcaccgttttagcattacaatccaagatcgcaaattgcggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaaatctacataagtgttgctccccacaaagttcaccaaacaagacctatataccttttcaactaccacagactcacccaccggagtagaaacacgaataggcatatcaagtaattcacaatgtaaatttagaccgttag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="83363" stop="84624"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83663" g_stop="84324" g_length="662"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="661" r_length="661" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-E351414" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>662</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E351414" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83663" e_stop="84324"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTTTATAAGGGGGTATAGAAATGGGGCGAGTACCCGGTTCAAGATCAATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGGACCAACGAAACTGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCATTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACGTACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGTATCTGTCCCAGGCTTGGATAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATATACATAAGTGTTGCTCCCCCACAAAGTTCACCAAACACGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGACATATCAAGTAATTCACAATGTAAATTTAGATCATTAG</genome_strand>
        <mrna_strand>CGGAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAACCTTTGCTCAACAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCTACGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCCGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAAAAACTCACAGACTATAAAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATGCACACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAATGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCT-CCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCGTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E244046" ref_strand="+" ref_description="SGN-E244046 [cLEE-1-H7]">
      <seq>aaacacgaataggcatatcaagtaattcacaatgtaaagttagaccattagcaaatgaggaagatacataagaaaatgtggatccaggatcaaacaatacagaagccatgcaatcacaaaccaaaagattacctgtgatgacaacatcagattcctccgcttcagaccgcccagggaaagcgtaacaatgggccctatcattcttatgtctgttgcccctaccatgttgtgatgtagtggctccagtttgcccatcacctcggccgttttggtgaccaccatttcctcgaccgccacgtcctccagaataacggactctgccatgaccacctctacctctaacctttggaggtctgtaactctgttttggacaatatctcttaatatgtccaatctccccacacccatagcactctctgggttcatgcataagtctctcagagaagtgttgaccggtcgaaggtggacccccaactacagtctgtagtgaagactgaattggtcggactgagtaacttcccgaaccctgtcctctagtgtaagcaccattaaactcacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="83974" stop="85130"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84274" g_stop="84830" g_length="557"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="559" r_length="559" r_score="0.912"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-E244046" ref_strand="+">
        <total_alignment_score>0.912</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E244046" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84274" e_stop="84830"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACACGAATAGACATATCAAGTAATTCACAATGTAAATTTAGATCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATTGTTTGTCTTTCCATTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGTTTGCCCATCACCTCGACCATTTTGGTGACCACCATTACCTCGACCACCACGTGCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCCATTGGGGGTCTATAACTCTGTTTTGGACAATTTCTCCTAATATGTCCAATCTCCCCACATCCATAACACTCT-AGAG-TCAAGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCATCTACAGTTTGCAGTGAAGACTAAATGGGTCGAACTGAGTAACCTCCGGAACCCTGTCCTCTAGAGTAAGAACCATTAAACTCACC</genome_strand>
        <mrna_strand>AAACACGAATAGGCATATCAAGTAATTCACAATGTAAAGTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAAAAGATTACCTGTGATGACAACATCAGATTCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCATTCTTATGTCTGTTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGTTTGCCCATCACCTCGGCCGTTTTGGTGACCACCATTTCCTCGACCGCCACGTCCTCCAGAATAACGGACTCTGCCATGACCACCTCTACCTCTAACCTTTGGAGGTCTGTAACTCTGTTTTGGACAATATCTCTTAATATGTCCAATCTCCCCACACCCATAGCACTCTCTGGGTTCATGCATAAGTCTCTCAGAGAAGTGTTGACCGGTCGAAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTGAGTAACTTCCCGAACCCTGTCCTCTAGTGTAAGCACCATTAAACTCACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E214046" ref_strand="+" ref_description="SGN-E214046 [cLEC-80-E17]">
      <seq>acgaataggcatatcaagaaattcacaatgtaaatttagaccattagcaaatgaggaagatacataagaaaacgtggatccaggatcaaacaatacggaagccatgcaatcacaaacaagaagattacctgtgatgacagcatcagatgcctccgctttagaccgcccagggaaagcgtaacaatgggccctatagtttgtttgtccattgcccctaccatgtcgtgatgtagtggccccagtttgtccattacctctgccgttttggtgaccaccattgcctcgaccaccacgtcctccaaaataacggcctctaccatgacaacctctacctctaactattgggggtctataacttggtccgggaaaatttctcctaatatgtccaatctccccacatccataacattctctagagtcactcataggcccctcggagaagtgttgaccggtctgaggtggacccccaactacagtttgtagtgaagactgaatgggtcgaactgagtaacctccagaaccttgtcctctagagtaagaacccttaaactcatctcccctttgaaacctcatcgatgtcgatgtcgtggtgaagtcgtctggtttcactccttccacttctatcaaaaagtctaccacttcttggaaggattttgccgttgccgctacctgtaagggcgaaatccgcaattctgacctcaaccccttcacaaccggcgaatccgctcttgagggactgaacagagttgagtggcatatctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="83978" stop="85288"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84278" g_stop="85039" g_length="762"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="763" r_length="763" r_score="0.902"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-E214046" ref_strand="+">
        <total_alignment_score>0.902</total_alignment_score>
        <cumulative_length_of_scored_exons>762</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E214046" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84278" e_stop="85039"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGAATAGACATATCAAGTAATTCACAATGTAAATTTAGATCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATTGTTTGTCTTTCCATTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGTTTGCCCATCACCTCGACCATTTTGGTGACCACCATTACCTCGACCACCACGTGCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCCATTGGGGGTCTATAACTCTGTTTTGGACAATTTCTCCTAATATGTCCAATCTCCCCACATCCATAACA--CTCTAGAGTCAAGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCATCTACAGTTTGCAGTGAAGACTAAATGGGTCGAACTGAGTAACCTCCGGAACCCTGTCCTCTAGAGTAAGAACCATTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTCGATGCCATGGTGAATTCATCTGGCTTCACTCCTTCCACCTCTACCACGAAATCTACTACTTCTTGGAAGGATTTTGCCGTAGCCGCTACATGTAAGGCTGAAATCCGCAACTCTGACCTCAACCCCTTCACAAAACGACGAATCCGCTCTTG-TGGACTGAAACAAAGTTGGGTGGCATATCTAG</genome_strand>
        <mrna_strand>ACGAATAGGCATATCAAGAAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAACGTGGATCCAGGATCAAACAATACGGAAGCCATGCAATCACAAACAAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTTAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATAGTTTGTTTGTCCATTGCCCCTACCATGTCGTGATGTAGTGGCCCCAGTTTGTCCATTACCTCTGCCGTTTTGGTGACCACCATTGCCTCGACCACCACGTCCTCCAAAATAACGGCCTCTACCATGACAACCTCTACCTCTAACTATTGGGGGTCTATAACTTGGTCCGGGAAAATTTCTCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTAGAGTCACTCATAGGCCCCTCGGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTTTGTAGTGAAGACTGAATGGGTCGAACTGAGTAACCTCCAGAACCTTGTCCTCTAGAGTAAGAACCCTTAAACTCATCTCCCCTTTGAAACCTCATCGATGTCGATGTCGTGGTGAAGTCGTCTGGTTTCACTCCTTCCACTTCTATCAAAAAGTCTACCACTTCTTGGAAGGATTTTGCCGTTGCCGCTACCTGTAAGGGCGAAATCCGCAATTCTGACCTCAACCCCTTCAC-AACCGGCGAATCCGCTCTTGAGGGACTG-AACAGAGTTGAGTGGCATATCTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E356912" ref_strand="+" ref_description="SGN-E356912 [cTOS-22-F17]">
      <seq>caggatcaaacaatacggaagccatgcaatcacaaactagaagattacctgtgatgacagcatcagatgcctccgcttcagaccgcccagggaaagcgtaacaatgggccctatcgtttgtctgcccattgcccctaccatgttgtgatgtagtggccccagtttgcccattacctctgccgttttggtgaccaccattacctcgaccaccacgtcctccagaataacggcctctaccatgaccacctctacctctagctattgggggtctataacttggtccaggacaatttatcctaatatgtccaatctccccacatccataacattctctggagtcactcataggccccttggagaagtgttgaccggtctgaggtggacccccaactacagtctgtagtgaagactgaatgggtcgagccgagtaacctccggaaccttgtcctctagagtaagaacccttaaactcacctccctttcgaaacctctttgatgttgatgtcgtggtgaagtcgtctggcttcactccttccacttctatcacaaagtctaccacttcttggaaggattttgccgttgccgctacctgtaaggccgaaatccgcaattctgacctcaaccccttcacaaaccggagaatccgctcttgaggactgaaacagagttgagtggcatatccggatagtgcacggaacttagcctcataagcattaaccgacatcctaccttgctctaggctcaggaactcatctcttttcctatccctcaaagtccgggggatatactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="84058" stop="85445"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84358" g_stop="85145" g_length="788"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="790" r_length="790" r_score="0.916"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-E356912" ref_strand="+">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>788</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E356912" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84358" e_stop="85145"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATTGTTTGTCTTTCCATTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGTTTGCCCATCACCTCGACCATTTTGGTGACCACCATTACCTCGACCACCACGTGCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCCATTGGGGGTCTATAACTCTGTTTTGGACAATTTCTCCTAATATGTCCAATCTCCCCACATCCATAACA--CTCTAGAGTCAAGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCATCTACAGTTTGCAGTGAAGACTAAATGGGTCGAACTGAGTAACCTCCGGAACCCTGTCCTCTAGAGTAAGAACCATTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTCGATGCCATGGTGAATTCATCTGGCTTCACTCCTTCCACCTCTACCACGAAATCTACTACTTCTTGGAAGGATTTTGCCGTAGCCGCTACATGTAAGGCTGAAATCCGCAACTCTGACCTCAACCCCTTCACAAAACGACGAATCCGCTCTTGTGGACTGAAACAAAGTTGGGTGGCATATCTAGATAGTGCATAAAACTTAGCCTCATATGCATTGACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTT</genome_strand>
        <mrna_strand>CAGGATCAAACAATACGGAAGCCATGCAATCACAAACTAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGCCCATTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCGTTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGGGTCTATAACTTGGTCCAGGACAATTTATCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTGGAGTCACTCATAGGCCCCTTGGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATGGGTCGAGCCGAGTAACCTCCGGAACCTTGTCCTCTAGAGTAAGAACCCTTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTTGATGTCGTGGTGAAGTCGTCTGGCTTCACTCCTTCCACTTCTATCACAAAGTCTACCACTTCTTGGAAGGATTTTGCCGTTGCCGCTACCTGTAAGGCCGAAATCCGCAATTCTGACCTCAACCCCTTCACAAACCGGAGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCCGGATAGTGCACGGAACTTAGCCTCATAAGCATTAACCGACATCCTACCTTGCTCTAGGCTCAGGAACTCATCTCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E353805" ref_strand="+" ref_description="SGN-E353805 [cTOS-10-C24]">
      <seq>ggatcaacaatacggaagccatgcaatcacaaactagaagattacctgtgatgacagcatcagatgcctccgcttcagaccgcccagggaaagcgtaacaatgggccctatcgtttgtctgcccattgcccctaccatgttgtgatgtagtggccccagtttgcccattacctctgccgttttggtgaccaccattacctcgaccaccacgtcctccagaataacggcctctaccatgaccacctctacctctagctattgggggtctataacttggtccaggacaatttatcctaatatgtccaatctccccacatccataacattctctggagtcactcataggccccttggagaagtgttgaccggtctgaggtggacccccaactacagtctgtagtgaagactgaatgggtcgagccgagtaacctccggaaccttgtcctctaaagtaagaacccttaaactcacctccctttcgaaacctctttgatgttgatgtcgtggtgaagtcgtctggcttcactccttcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="84060" stop="85191"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84360" g_stop="84891" g_length="532"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="533" r_length="533" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-E353805" ref_strand="+">
        <total_alignment_score>0.917</total_alignment_score>
        <cumulative_length_of_scored_exons>532</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E353805" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84360" e_stop="84891"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATTGTTTGTCTTTCCATTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGTTTGCCCATCACCTCGACCATTTTGGTGACCACCATTACCTCGACCACCACGTGCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCCATTGGGGGTCTATAACTCTGTTTTGGACAATTTCTCCTAATATGTCCAATCTCCCCACATCCATAACA--CTCTAGAGTCAAGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCATCTACAGTTTGCAGTGAAGACTAAATGGGTCGAACTGAGTAACCTCCGGAACCCTGTCCTCTAGAGTAAGAACCATTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTCGATGCCATGGTGAATTCATCTGGCTTCACTCCTTCC</genome_strand>
        <mrna_strand>GGATC-AACAATACGGAAGCCATGCAATCACAAACTAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGCCCATTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCGTTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGGGTCTATAACTTGGTCCAGGACAATTTATCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTGGAGTCACTCATAGGCCCCTTGGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATGGGTCGAGCCGAGTAACCTCCGGAACCTTGTCCTCTAAAGTAAGAACCCTTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTTGATGTCGTGGTGAAGTCGTCTGGCTTCACTCCTTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E356209" ref_strand="+" ref_description="SGN-E356209 [cTOS-20-H15]">
      <seq>ttcagaccgcccagggaaagcgtaacaatgggccctatcgttcgtctgtccgttgcccctaccatgttgtgatgtagtggccccagtttgcccattacctctgccattttggtgaccaccattacctcgaccaccacgtcctccagaataacggcctctaccatgaccacctctacctctagctattgggggtctataactttgtctgggacaatttttcctaatatgtccaatctccccacatccataacattctctggagtcaagcataggcccctcggagaagtgttaaccggtctgaggtggtctcccaactacagtctgtagtgaagactgaattggtcggactgagtaacttcccgaaccctgtcctctagtgtaagaaccattaaactcacctcccttccgaaacctttttgatgtcgatgttgtggtgaagtcgtctggcttcactccttccacttctatcacaaagtctaccacttcttggaaggattttgccgttgccgctatctgtaaggacgaaatccgcaattctgacctcaaccccttcacaaaccggcgaatccgctcttgaggactgaaacagagttgagtggcatatctggatagtgcacgaaacttagcctcataagcattaaccgacatcctaccttgctctaggctcaagaactcatcccttttcctatccctcaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="84134" stop="85429"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84434" g_stop="85129" g_length="696"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="698" r_length="698" r_score="0.911"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-E356209" ref_strand="+">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>696</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E356209" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84434" e_stop="85129"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATTGTTTGTCTTTCCATTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGTTTGCCCATCACCTCGACCATTTTGGTGACCACCATTACCTCGACCACCACGTGCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCCATTGGGGGTCTATAACTCTGTTTTGGACAATTTCTCCTAATATGTCCAATCTCCCCACATCCATAACA--CTCTAGAGTCAAGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCATCTACAGTTTGCAGTGAAGACTAAATGGGTCGAACTGAGTAACCTCCGGAACCCTGTCCTCTAGAGTAAGAACCATTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTCGATGCCATGGTGAATTCATCTGGCTTCACTCCTTCCACCTCTACCACGAAATCTACTACTTCTTGGAAGGATTTTGCCGTAGCCGCTACATGTAAGGCTGAAATCCGCAACTCTGACCTCAACCCCTTCACAAAACGACGAATCCGCTCTTGTGGACTGAAACAAAGTTGGGTGGCATATCTAGATAGTGCATAAAACTTAGCCTCATATGCATTGACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAG</genome_strand>
        <mrna_strand>TTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTCGTCTGTCCGTTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCATTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGGGTCTATAACTTTGTCTGGGACAATTTTTCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTGGAGTCAAGCATAGGCCCCTCGGAGAAGTGTTAACCGGTCTGAGGTGGTCTCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTGAGTAACTTCCCGAACCCTGTCCTCTAGTGTAAGAACCATTAAACTCACCTCCCTTCCGAAACCTTTTTGATGTCGATGTTGTGGTGAAGTCGTCTGGCTTCACTCCTTCCACTTCTATCACAAAGTCTACCACTTCTTGGAAGGATTTTGCCGTTGCCGCTATCTGTAAGGACGAAATCCGCAATTCTGACCTCAACCCCTTCACAAACCGGCGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E356614" ref_strand="+" ref_description="SGN-E356614 [cTOS-21-N3]">
      <seq>gcgaatccgctcttgaggactgaaacagagttgagtggcatatctggatagtgcacgaaacttagcctcataagcattaactgacaccctaccttgctctaggctcaagaactcatcccttttcttatccctcaaagtccgggggatatacttctccataaacaaactatagaatgaggcccaagtcataggtgatgcctctattggttgacactcgatatgtgaccgccaccacatttgggcgttcccttgaaactgataagtcacaaactccacaccaaaccgttctactatacccatcttgtgtagtagctcgtgacagtcaaccagaaaatcataagcatcctccgattcagcacccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattatagggacagtagtcaaacgtggaaatgtgcctatgtccaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataacccgctaagataagccagaacctgattgatcatctctggggtaggttggggtggcatttcctcattttgcacttgntcagtttccccatccctccctttctctattacttcctcagtcagtggaagagtcactgccctagtatcagatgggct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="84694" stop="86012"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84993" g_stop="85712" g_length="720"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="720" r_length="720" r_score="0.901"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-E356614" ref_strand="+">
        <total_alignment_score>0.901</total_alignment_score>
        <cumulative_length_of_scored_exons>720</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E356614" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84993" e_stop="85712"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGAATCCGCTCTTGTGGACTGAAACAAAGTTGGGTGGCATATCTAGATAGTGCATAAAACTTAGCCTCATATGCATTGACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAGCTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTCCGTTGGTTGACACTCAACATGTGACCGCCACCACATTTTGGCGTTCCCTTGAAACTGATAACTCACGAACTCAACACCAAACCGTTCTACTATGCCCATCTTTTGTAGTAGCTCATGACAGTCAACCAGAAAATCGTAAGCATCCTCAGATTCAGCACCCTTGAAGACTGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTTATGCTGATCATTTGTCATTATAGGCCTAGTAGTCAGACGTGGAAACGTGCCTATGTCCAATGAGGCATCCATACAAGGAGCCATAGTGGCTGCATGTTGTACCTCTGAAACCGGGGGTGTTGGTGCAGAAAACACTGGAAGGGCCTGACCCTGATCAGACAACCCACTAAGATAAGCGAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCAATTCCTCATTTTGCACTTGTTTATTCTCCCCTTCCTCACCCTCTCT-TACCACTTCCTTAGTCGGTGGAGGAGTCACCGCCCTAGTATCAGACGGGCT</genome_strand>
        <mrna_strand>GCGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACTGACACCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCTTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAACTATAGAATGAGGCCCAAGTCATAGGTGATGCCTCTATTGGTTGACACTCGATATGTGACCGCCACCACATTTGGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAGAAAATCATAAGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGGACAGTAGTCAAACGTGGAAATGTGCCTATGTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGNTCAGTTTCCCCATCC-CTCCCTTTCTCTATTACTTCCTCAGTCAGTGGAAGAGTCACTGCCCTAGTATCAGATGGGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E352401" ref_strand="+" ref_description="SGN-E352401 [cTOS-9-N1]">
      <seq>aatccgctcttgaggactgaaacagagttgagtggcatatctggatagtgcacgaaacttagcctcataagcattaactgacaccctaccttgctctaggctcaagaactcatcccttttcttatccctcaaagtccgggggatatacttctccataaacaaactatagaatgaggcccaagtcataggtgatgcctctattggttgacactcgatatgtgaccgccaccacatttgggcgttcccttgaaactgataagtcacaaactccacaccaaaccgttctactatacccatcttgtgtagtagctcgtgacagtcaaccagaaaatcataagcatcctccgattcagcacccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattatagggacagtagtcaaacgtggaaatgtgcctatgtccaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataacccgctaagataagccagaacctgattgatcatctctggggtaggttggggtgccatttccctcatttgcacttgttcagtttccccatcctccccttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="84696" stop="85961"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84996" g_stop="85659" g_length="664"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="664" r_length="664" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-E352401" ref_strand="+">
        <total_alignment_score>0.904</total_alignment_score>
        <cumulative_length_of_scored_exons>664</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E352401" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84996" e_stop="85659"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCCGCTCTTGTGGACTGAAACAAAGTTGGGTGGCATATCTAGATAGTGCATAAAACTTAGCCTCATATGCATTGACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAGCTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTCCGTTGGTTGACACTCAACATGTGACCGCCACCACATTTTGGCGTTCCCTTGAAACTGATAACTCACGAACTCAACACCAAACCGTTCTACTATGCCCATCTTTTGTAGTAGCTCATGACAGTCAACCAGAAAATCGTAAGCATCCTCAGATTCAGCACCCTTGAAGACTGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTTATGCTGATCATTTGTCATTATAGGCCTAGTAGTCAGACGTGGAAACGTGCCTATGTCCAATGAGGCATCCATACAAGGAGCCATAGTGGCTGCATGTTGTACCTCTGAAACCGGGGGTGTTGGTGCAGAAAACACTGGAAGGGCCTGACCCTGATCAGACAACCCACTAAGATAAGCGAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCAATTCCTCATTTTGCACTTGTTTATTCTCCCCTTCCTCACCCTCT</genome_strand>
        <mrna_strand>AATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACTGACACCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCTTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAACTATAGAATGAGGCCCAAGTCATAGGTGATGCCTCTATTGGTTGACACTCGATATGTGACCGCCACCACATTTGGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAGAAAATCATAAGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGGACAGTAGTCAAACGTGGAAATGTGCCTATGTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGCCATTTCCCTCATTTGCACTTGTTCAGTTTCCCCATCCTCCCCTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E329287" ref_strand="+" ref_description="SGN-E329287 [cTOD-2-K13]">
      <seq>acctagcccatctggtactaaggcggtgacacctccaccaactgaggaagtggtaagagagggtgaggatggggagaatgaacaagtgcagaatgaggaattgccaccccaacctacccaagagatgatcaatcaggttcttgcttaccttagcgggttatctgatcaaggccaagcacctccagtgttttctgcactagcacctcaggctccggaggtacaacatgcgcctactgtgactccccgcatcgatacctcattggaaataggaacgtttccccgtctgactacagggcctataatgacaaatgatcagcatgaactttttagtaagttcttgaaattgaaacctcaagtctacaagggtgttgaatctgaggatgcctacgattttctggttgactgtcatgagctactacacaagatgggtatagtagaacggtttggtgttgagtttgtgacttatcagtttcaagggaacgccaaaatgtggtggcggtcacatgttgagtgtcaaccaacagaggcaccacgtatgacttgggcatcattct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="86016" stop="84863"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85716" g_stop="85163" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="554" r_length="554" r_score="0.903"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E329287" ref_strand="+">
        <total_alignment_score>0.903</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E329287" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85716" e_stop="85163"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCTAGCCCGTCTGATACTAGGGCGGTGACTCCTCCACCGACTAAGGAAGTGGTAAGAGAGGGTGAGGAAGGGGAGAATAAACAAGTGCAAAATGAGGAATTGCCACCCCAACCTACCCCAGAGATGATCAATCAGGTTCTCGCTTATCTTAGTGGGTTGTCTGATCAGGGTCAGGCCCTTCCAGTGTTTTCTGCACCAACACCCCCGGTTTCAGAGGTACAACATGCAGCCACTATGGCTCCTTGTATGGATGCCTCATTGGACATAGGCACGTTTCCACGTCTGACTACTAGGCCTATAATGACAAATGATCAGCATAAACTTTTCAGTAAGTTCTTGAAATTGAAACCTCCAGTCTTCAAGGGTGCTGAATCTGAGGATGCTTACGATTTTCTGGTTGACTGTCATGAGCTACTACAAAAGATGGGCATAGTAGAACGGTTTGGTGTTGAGTTCGTGAGTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACGGAGGCACCACCTATGACTTGGGCCTCATTCT</genome_strand>
        <mrna_strand>ACCTAGCCCATCTGGTACTAAGGCGGTGACACCTCCACCAACTGAGGAAGTGGTAAGAGAGGGTGAGGATGGGGAGAATGAACAAGTGCAGAATGAGGAATTGCCACCCCAACCTACCCAAGAGATGATCAATCAGGTTCTTGCTTACCTTAGCGGGTTATCTGATCAAGGCCAAGCACCTCCAGTGTTTTCTGCACTAGCACCTCAGGCTCCGGAGGTACAACATGCGCCTACTGTGACTCCCCGCATCGATACCTCATTGGAAATAGGAACGTTTCCCCGTCTGACTACAGGGCCTATAATGACAAATGATCAGCATGAACTTTTTAGTAAGTTCTTGAAATTGAAACCTCAAGTCTACAAGGGTGTTGAATCTGAGGATGCCTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACGTATGACTTGGGCATCATTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E245958" ref_strand="+" ref_description="SGN-E245958 [cLEF-51-E16]">
      <seq>caggctccggaggtacaatatgcggctactatggctccccgcatggatgttccattggaaataggcacgtttccaagtctgactactgggcctataatgacaaatgatcagcatatattttcagtaagttcttgaaattgaaacctccagtcttcaaaggtgcggaatcggaggatgcttacgattttctggtggactgtcatgagctactacacaagaagggtatagtagaacggtttggtgttgagttcgtgagttatcagtttcaagggaacgccaaaatgtggtggcggtcacatattgagtgtcaaccaacagaagcaccacctatgacttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="85759" stop="84873"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85511" g_stop="85173" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="338" r_length="338" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E245958" ref_strand="+">
        <total_alignment_score>0.917</total_alignment_score>
        <cumulative_length_of_scored_exons>339</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E245958" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85511" e_stop="85173"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGGTTTCAGAGGTACAACATGCAGCCACTATGGCTCCTTGTATGGATGCCTCATTGGACATAGGCACGTTTCCACGTCTGACTACTAGGCCTATAATGACAAATGATCAGCATAAACTTTTCAGTAAGTTCTTGAAATTGAAACCTCCAGTCTTCAAGGGTGCTGAATCTGAGGATGCTTACGATTTTCTGGTTGACTGTCATGAGCTACTACAAAAGATGGGCATAGTAGAACGGTTTGGTGTTGAGTTCGTGAGTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACGGAGGCACCACCTATGACTTGG</genome_strand>
        <mrna_strand>CAGGCTCCGGAGGTACAATATGCGGCTACTATGGCTCCCCGCATGGATGTTCCATTGGAAATAGGCACGTTTCCAAGTCTGACTACTGGGCCTATAATGACAAATGATCAGCATATA-TTTTCAGTAAGTTCTTGAAATTGAAACCTCCAGTCTTCAAAGGTGCGGAATCGGAGGATGCTTACGATTTTCTGGTGGACTGTCATGAGCTACTACACAAGAAGGGTATAGTAGAACGGTTTGGTGTTGAGTTCGTGAGTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATATTGAGTGTCAACCAACAGAAGCACCACCTATGACTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E355114" ref_strand="+" ref_description="SGN-E355114 [cTOS-18-B12]">
      <seq>ttaggttcgttggtctcatcacacaagaacaggtctagtagagtctttaggaacggtagggggacgcctttacttttctttgagaggctataagactttaggaaaatttcaccctttcattctttctttcgtgctactacttgagtccaattggtatctaggcgatacaaattggtatctgaccatcttcactctcttttgcagatggttagaactagagcaacgaccacgtcaacaccaacaccggccagacaagaaacaactgagccagccactggggctgtgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="86368" stop="85483"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86068" g_stop="85783" g_length="286"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="286" r_length="286" r_score="0.902"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E355114" ref_strand="+">
        <total_alignment_score>0.902</total_alignment_score>
        <cumulative_length_of_scored_exons>286</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E355114" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86068" e_stop="85783"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGGTTCGTTGGTCTCATCACACAAGAACGAGTCTGGTAGAGTCTTAAGGAACGGTAGGGGGACACCTTTACTTTTCTTTGAGGGGCTATAAGACTTTAGGAAAATTCCATTCTTTCATTCTTTCTTTCGTGCTATTACTTGGGTCCAATTGGTATCTAGGTGATACAAATTGGTATCTGACCATCTTCACTCTTTTTCGCAGATGGTTAGAACTAGAGCAATAATTGCGCCAACACCAACATCGGCAAGACAAGAAGCGTCCGAGCCAGCCACTGGGGCTGTAG</genome_strand>
        <mrna_strand>TTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGAGTCTTTAGGAACGGTAGGGGGACGCCTTTACTTTTCTTTGAGAGGCTATAAGACTTTAGGAAAATTTCACCCTTTCATTCTTTCTTTCGTGCTACTACTTGAGTCCAATTGGTATCTAGGCGATACAAATTGGTATCTGACCATCTTCACTCTCTTTTGCAGATGGTTAGAACTAGAGCAACGACCACGTCAACACCAACACCGGCCAGACAAGAAACAACTGAGCCAGCCACTGGGGCTGTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E391780" ref_strand="+" ref_description="SGN-E391780 [TUS-24-O2]">
      <seq>tcacaaaccgacatatagatttaggggatcggagtgtcacgtaccgacacaagaggattaatgaatattgagggagcggagtgtcacgtaccgacacaagagaaataaagataatgaatcttgaaagatgttaatatactcaatctaatgaacatgattcccaaatgagtatggtattgaggcttgagtcctcatgtgtgaacttgacggtaattgttaatgatatagtatttgttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="87158" stop="86320"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86858" g_stop="86621" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="239" r_length="239" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E391780" ref_strand="+">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>238</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E391780" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86858" e_stop="86621"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACGAACCGACACGTAGATTTAGGGGATCGGAGTGTCACGTACCGACACAAGAGGATTAATGAATA-TGAGGGAGCGGAGTGTCACGTACCAACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAATGAGTATCATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTAACGGTATTTGTTAATGATATAGTGCTTGTTGTT</genome_strand>
        <mrna_strand>TCACAAACCGACATATAGATTTAGGGGATCGGAGTGTCACGTACCGACACAAGAGGATTAATGAATATTGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAATGAACATGATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTGACGGTAATTGTTAATGATATAGTATTTGTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E349726" ref_strand="+" ref_description="SGN-E349726 [cTOS-3-C5]">
      <seq>tagtcttcggtggaggtaggttattgtttctcttacgatattcgtagtaaactcttaatagagaatgatatgtattgataatattgtaaaccctgctatgtgcttaattgtatgcttgcatgaatgtaactatataattgttattatataagcatgatgaagttattgaatcccaaatcttgtaaaaacctaatctctttttaatgatgatgccttggtaagggagaaggcttgatgaactaaagtaatgagattgatgatgccttggtaagggagaaggcttgatgaattgatagaatgagattaggggatcgggtgtcacgaactgacacgtagaattaggggatcgggtgtcacaaaccgacacgtagattaagggatcaggtgtcacgaaccaacacatagattaggggatcgggtgtcacgaaccgacacgtagatttaggggatcgggtgtcacgaaccgacacgtagatttaggggatcgggtgtcacgaaccgacacgtagatttaggggatcaggtgtcacgaaccgacacgtagatttaggggatcggagtgtcacgttccgacacgtagatttaggggatcagagtatcacgtaccgacacaagaagattaatgaatatganggagcggaatgtcacgtaccgacacaagagaaataaagacaatgaatcttgaaagatgttatatactcaatctaatgaacataa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="87720" stop="86403"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87421" g_stop="86709" g_length="713"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="711" r_length="711" r_score="0.923"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E349726" ref_strand="+">
        <total_alignment_score>0.923</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E349726" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87421" e_stop="86709"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCTTCGGTGGAGGTAGGTTATGGTTTCTCTTACGATATTCGTAGTAAGCTCTTAATAGCGAATAATATGTATTGATAATATTGTAAACCCTTCTATGTGCTTAATTGTGTGCTTGCATGAATGTAATTATATAATTGTGATTATATAAGCATGATGAATTTATTGAATCCCAAATCTTGCAAAACCCTGATCTCTTTGTTAATGATGAGGCCTTAGT-ATAAAGAAGGCGTGATGAACTAAAATAATGAGATTGATGATGCCTTGGTAAGAAAGAAGGCTTGATGAATTGGTAGAAGGAGATTAGGGGATCGGGTGTCACGAACTGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACGTATATTTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAGCCGACACGTAGATTTAGGGGATCAGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCAACACGTAAATTTAGGGGAACGG-GTGTCACGAACCGACACGTAGATTTAGGGGATCGGAGTGTCACGTACCGACACAAGAGGATTAATGAATATGAGGGAGCGGAGTGTCACGTACCAACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAATGA</genome_strand>
        <mrna_strand>TAGTCTTCGGTGGAGGTAGGTTATTGTTTCTCTTACGATATTCGTAGTAAACTCTTAATAGAGAATGATATGTATTGATAATATTGTAAACCCTGCTATGTGCTTAATTGTATGCTTGCATGAATGTAACTATATAATTGTTATTATATAAGCATGATGAAGTTATTGAATCCCAAATCTTGTAAAAACCTAATCTCTTT-TTAATGATGATGCCTTGGTAAGGGAGAAGGCTTGATGAACTAAAGTAATGAGATTGATGATGCCTTGGTAAGGGAGAAGGCTTGATGAATTGATAGAATGAGATTAGGGGATCGGGTGTCACGAACTGACACGTAGAATTAGGGGATCGGGTGTCACAAACCGACACGTAGA-TTAAGGGATCAGGTGTCACGAACCAACACATAGA-TTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCAGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGAGTGTCACGTTCCGACACGTAGATTTAGGGGATCAGAGTATCACGTACCGACACAAGAAGATTAATGAATATGANGGAGCGGAATGTCACGTACCGACACAAGAGAAATAAAGACAATGAATCTTGAAAGATGTT-ATATACTCAATCTAATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E357559" ref_strand="+" ref_description="SGN-E357559 [cTOS-23-F2]">
      <seq>tagtcttcggtggaggtaggttattgtttctcttacgatattcgtagtaaactcttaatagagaatgatatgtattgataatattgtaaaccctgctatgtgcttaattgtatgcttgcatgaatgtaactatataattgttattatataagcatgatgaagttattgaatcccaaatcttgtaaaaacctaatctctttttaatgatgatgccttggtaagggagaaggcttgatgaactaaagtaatgagattgatgatgccttggtaagggagaaggcttgatgaattgatagaatgagattaggggatcgggtgtcacgaactgacacgtagaattaggggatcgggtgtcacaaaccgacacgtagattaagggatcaggtgtcacgaaccaacaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="87720" stop="86720"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87421" g_stop="87019" g_length="403"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="402" r_length="402" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E357559" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>403</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E357559" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87421" e_stop="87019"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCTTCGGTGGAGGTAGGTTATGGTTTCTCTTACGATATTCGTAGTAAGCTCTTAATAGCGAATAATATGTATTGATAATATTGTAAACCCTTCTATGTGCTTAATTGTGTGCTTGCATGAATGTAATTATATAATTGTGATTATATAAGCATGATGAATTTATTGAATCCCAAATCTTGCAAAACCCTGATCTCTTTGTTAATGATGAGGCCTTAGT-ATAAAGAAGGCGTGATGAACTAAAATAATGAGATTGATGATGCCTTGGTAAGAAAGAAGGCTTGATGAATTGGTAGAAGGAGATTAGGGGATCGGGTGTCACGAACTGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACG</genome_strand>
        <mrna_strand>TAGTCTTCGGTGGAGGTAGGTTATTGTTTCTCTTACGATATTCGTAGTAAACTCTTAATAGAGAATGATATGTATTGATAATATTGTAAACCCTGCTATGTGCTTAATTGTATGCTTGCATGAATGTAACTATATAATTGTTATTATATAAGCATGATGAAGTTATTGAATCCCAAATCTTGTAAAAACCTAATCTCTTT-TTAATGATGATGCCTTGGTAAGGGAGAAGGCTTGATGAACTAAAGTAATGAGATTGATGATGCCTTGGTAAGGGAGAAGGCTTGATGAATTGATAGAATGAGATTAGGGGATCGGGTGTCACGAACTGACACGTAGAATTAGGGGATCGGGTGTCACAAACCGACACGTAGA-TTAAGGGATCAGGTGTCACGAACCAACACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E349296" ref_strand="+" ref_description="SGN-E349296 [cTOS-2-P10]">
      <seq>gaaaaactggcagaaatgacggaccccacgacggaccatcatgggcacgacggaccgtcgcagggtctcatttcaaaacacttaggaaatctgaaattgggtactgaaaatcgactctctgaacttcgtaacggaatggcaagacggaccgtcacaggcgtgatggaccatcacagagtcttcagtgaaaatccagtctctgaaccttgcgacgacctgcaggacggaccgtcgcaggcacaacgggctgtcacaggctgcgtaaatcccagtctgagtcggaattcctcaattgttttaagggacgtttttgactattcctgctttaattataaagttagtgggttaatgttaataagtctaattacttgggggttaaaagaggtaaccttaagttaattagtgggttattattgccatattttattcttaattatatactaattagggtaaaagaaagagggtttgaataaagaaaatagaaagaacaagagaaagagagagaaagtcgaacgagaaagaggatcgaacgagaggaaaaaacacaaagcttgggaaatcacttgcttgatcacgaatcttcggtggaggtaggttatggtttctcttacgatattcgtagtaagctcttaatagcgaataatatgtattgataatatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="88296" stop="87037"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87996" g_stop="87337" g_length="660"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="660" r_length="660" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E349296" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>660</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E349296" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87996" e_stop="87337"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAACTGGCAGAAATGACGGACCCCACGACGGACCATCATGGGCACGACGGACCGTCGCAGGGTCTCATTTCAAAACACTTAGGAAATCTGAAATTGGGTACTGAAAATCGACTCTCTGAACTTCGTAACGGAATGGCAAGACGGACCGTCACAGGCGTGATGGACCATCACAGAGTCTTCAGTGAAAATCCAGTCTCTGAACCTTGCGACGACCTGCAGGACGGACCGTCGCAGGCACAACGGGCTGTCACAGGCTGCGTAAATCCCAGTCTGAGTCGGAATTCCTCAATTGTTTTAAGGGACGTTTTTGACTATTCCTGCTTTAATTATAAAGTTAGTGGGTTAATGTTAATAAGTCTAATTACTTGGGGGTTAAAAGAGGTAACCTTAAGTTAATTAGTGGGTTATTATTGCCATATTTTATTCTTAATTATATACTAATTAGGGTAAAAGAAAGAGGGTTTGAATAAAGAAAATAGAAAGAACAAGAGAAAGAGAGAGAAAGTCGAACGAGAAAGAGGATCGAACGAGAGGAAAAAACACAAAGCTTGGGAAATCACTTGCTTGATCACGAATCTTCGGTGGAGGTAGGTTATGGTTTCTCTTACGATATTCGTAGTAAGCTCTTAATAGCGAATAATATGTATTGATAATATT</genome_strand>
        <mrna_strand>GAAAAACTGGCAGAAATGACGGACCCCACGACGGACCATCATGGGCACGACGGACCGTCGCAGGGTCTCATTTCAAAACACTTAGGAAATCTGAAATTGGGTACTGAAAATCGACTCTCTGAACTTCGTAACGGAATGGCAAGACGGACCGTCACAGGCGTGATGGACCATCACAGAGTCTTCAGTGAAAATCCAGTCTCTGAACCTTGCGACGACCTGCAGGACGGACCGTCGCAGGCACAACGGGCTGTCACAGGCTGCGTAAATCCCAGTCTGAGTCGGAATTCCTCAATTGTTTTAAGGGACGTTTTTGACTATTCCTGCTTTAATTATAAAGTTAGTGGGTTAATGTTAATAAGTCTAATTACTTGGGGGTTAAAAGAGGTAACCTTAAGTTAATTAGTGGGTTATTATTGCCATATTTTATTCTTAATTATATACTAATTAGGGTAAAAGAAAGAGGGTTTGAATAAAGAAAATAGAAAGAACAAGAGAAAGAGAGAGAAAGTCGAACGAGAAAGAGGATCGAACGAGAGGAAAAAACACAAAGCTTGGGAAATCACTTGCTTGATCACGAATCTTCGGTGGAGGTAGGTTATGGTTTCTCTTACGATATTCGTAGTAAGCTCTTAATAGCGAATAATATGTATTGATAATATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E543256" ref_strand="-" ref_description="SGN-E543256 [TUS-64-P17]">
      <seq>aagaaatccccaaaaagctctttacatgtaccatcttcacccacttcatctggcaattcatcaagtatatctagtgtgagtggttgtggcaactttgtaaatagaggaagattgagaacgaaacaacaatttgagaagcataaagaagttagttgaagttcaagtaataaatcagaattggaaagatatcttgcggaagatattgagctagatagtgatgactttgatatattaatgtggtggaaagttaatgagccgagatttcctattctcgcggagatggttcgtgatgtgttagccattcctatttcaagtgtcgcatcggaatgtgcattcagcacaggaggtcgtgttcttgatccctttaggagttcattaactcctaaaattgtgcaatctcttatttgtgttcaagattggcttagaagtgagtcttttccaatcaatattgaggaagatttagagtatcttgaacaacttgaacttgattttgcttttagtgggactgaatctagtataattgatatatagttgcagcttgtaagttcaactatcaactagtgatgtgcggtaatgagtccatcaatgttttgttattttcttggttgctatctgctagaacttggaagctattgcaatggaggttgcaagttgcaatgatgttttgttggtttttaaaatctatttgttgctggaagttgcaatgagctagataatgatgactttagtttgtaactaactctattttagtgatggacacaagtttgttgaacttaaaaaaaaaaaaaaaaaactcgaggggggccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="97960" stop="99483"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98260" g_stop="98747" g_length="488"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="487" r_length="487" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98748" i_stop="98798" i_length="51">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.543" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98799" g_stop="98888" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="488" r_stop="577" r_length="90" r_score="0.989"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98889" i_stop="98985" i_length="97">
            <donor d_prob="0.986" d_score="0.98"/>
            <acceptor a_prob="0.914" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98986" g_stop="99183" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="578" r_stop="775" r_length="198" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="776" polyA_stop="794"/>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-E543256" ref_strand="-">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>776</cumulative_length_of_scored_exons>
        <coverage percentage="0.962" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E543256" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="98260" e_stop="98747"/>
          <exon e_start="98799" e_stop="98888"/>
          <exon e_start="98986" e_stop="99183"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAAATCCCCAAAAAGCTCTTTACATGTACCATCTTCATCCACTTCATCTGGCAATTCATCAAGTATATCTAGTGTGAGTGGTTGTGGCAACTTTGTAAATAGAGGAAGATTGAGAACGAAACAACAATTTGAGAAGCATAAAGAAGTTAGTGGAAGTTCAAGTAATAAATCAGAATTGGAAAGATATCTTGCGGAAGATATTGAGCTAGATAGTGATGACTTTGATATATTAATGTGGTGGAAAGTTAAATGAGCCGAGATTTCCTATTCTCGCGGAGATGGTTCGTGATGTGTTAGCACTTCCCATTTCAAGTGTCGCATCGGAATGTGCATTCAGCACAGGAGGTTGTGTTCTTGATCCCTTTAGGAGTTCATTAACTCCTAAAATTGTGCAATCTCTTATTTGTGTTCAAGATTGGCTTAGAAGTGAGTCTTTTCCAATCAATATTGAGGAAGATTTAGAGTATCTTGAACAACTTGAACTTGGTAAGAATTTGATATTTGTATTAACTAAATTGAAATTTCATATTTTTTTAGATTTTGCTTTTAGTGGGACTGAATCTAGTATAATTGATATATAGTTGCAGCTTGTAAGTTCAACTATCAACTAGTGATGTGCGGTAACGAGTAAGTAAAGAACTTATTTACATAAATTGCTTGATAGTTTTATATATTCAATTATGAAATGTAGATCATTTGTCTGAACAGTTCTGTTTTCTCGCAGGTCCATCAATGTTTTGTTATTTTCTTGGTTGCTATCGGCTAGAACTTGGAAGCTATTGCAATGGAGGTTGCAAGTTGCAATGATGTTTTGTTGGTTTTCTAAATCTCTTTGTTGCTGGAAGTTGCAATGAGCCAGATAATGATGACTTTAGTTTGTAACTAACTCTATTTTAGTGATGGACACAAGTTTGTTGAACTT</genome_strand>
        <mrna_strand>AAGAAATCCCCAAAAAGCTCTTTACATGTACCATCTTCACCCACTTCATCTGGCAATTCATCAAGTATATCTAGTGTGAGTGGTTGTGGCAACTTTGTAAATAGAGGAAGATTGAGAACGAAACAACAATTTGAGAAGCATAAAGAAGTTAGTTGAAGTTCAAGTAATAAATCAGAATTGGAAAGATATCTTGCGGAAGATATTGAGCTAGATAGTGATGACTTTGATATATTAATGTGGTGGAAAGTT-AATGAGCCGAGATTTCCTATTCTCGCGGAGATGGTTCGTGATGTGTTAGCCATTCCTATTTCAAGTGTCGCATCGGAATGTGCATTCAGCACAGGAGGTCGTGTTCTTGATCCCTTTAGGAGTTCATTAACTCCTAAAATTGTGCAATCTCTTATTTGTGTTCAAGATTGGCTTAGAAGTGAGTCTTTTCCAATCAATATTGAGGAAGATTTAGAGTATCTTGAACAACTTGAACTTG...................................................ATTTTGCTTTTAGTGGGACTGAATCTAGTATAATTGATATATAGTTGCAGCTTGTAAGTTCAACTATCAACTAGTGATGTGCGGTAATGA.................................................................................................GTCCATCAATGTTTTGTTATTTTCTTGGTTGCTATCTGCTAGAACTTGGAAGCTATTGCAATGGAGGTTGCAAGTTGCAATGATGTTTTGTTGGTTTTTAAAATCTATTTGTTGCTGGAAGTTGCAATGAGCTAGATAATGATGACTTTAGTTTGTAACTAACTCTATTTTAGTGATGGACACAAGTTTGTTGAACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E299669" ref_strand="-" ref_description="SGN-E299669 [cLEW-1-K19]">
      <seq>tgactttgatatattaatgtggtggaaagttaatgagccgagatttcctattctcgcggagatggttcgtaatgtgttagccattcctatttcaagtgtcgcatcggaatgtgcattcagcacaggaggtcgtgttcttgatccctttaggagttcattaactcctaaaattgtgcaatctcttatttgtgttcaagattggcttagaagtgagtcttttccaatcaatattgaggaagatttagagtatcttgaacaacttgaacttgattttgcttttagtgggactgaatctagtataattgatatatagttgcagcttgtaagttcaactatcaactagtgatgtgcggtaatgagtccatcaatgttttgttattttcttggttgctatctgctagaacttggaagctattgcaatggaggttgcaagttgcaatgatgttttgttggtttttaaaatctatttgttgctggaagttgcaatgagctagataatgatgactttagtttgtaactaactctattttagtgatggacacaagtttgttgaacaaacttcaacaaaagttgtgatgttgtcttgagtcttgaaaaaaaaaaggaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="98178" stop="99520"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98478" g_stop="98747" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="269" r_length="269" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98748" i_stop="98798" i_length="51">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.543" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98799" g_stop="98888" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="359" r_length="90" r_score="0.989"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98889" i_stop="98985" i_length="97">
            <donor d_prob="0.986" d_score="0.98"/>
            <acceptor a_prob="0.914" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98986" g_stop="99220" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="360" r_stop="594" r_length="235" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-E299669" ref_strand="-">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>595</cumulative_length_of_scored_exons>
        <coverage percentage="0.977" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E299669" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="98478" e_stop="98747"/>
          <exon e_start="98799" e_stop="98888"/>
          <exon e_start="98986" e_stop="99220"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGACTTTGATATATTAATGTGGTGGAAAGTTAAATGAGCCGAGATTTCCTATTCTCGCGGAGATGGTTCGTGATGTGTTAGCACTTCCCATTTCAAGTGTCGCATCGGAATGTGCATTCAGCACAGGAGGTTGTGTTCTTGATCCCTTTAGGAGTTCATTAACTCCTAAAATTGTGCAATCTCTTATTTGTGTTCAAGATTGGCTTAGAAGTGAGTCTTTTCCAATCAATATTGAGGAAGATTTAGAGTATCTTGAACAACTTGAACTTGGTAAGAATTTGATATTTGTATTAACTAAATTGAAATTTCATATTTTTTTAGATTTTGCTTTTAGTGGGACTGAATCTAGTATAATTGATATATAGTTGCAGCTTGTAAGTTCAACTATCAACTAGTGATGTGCGGTAACGAGTAAGTAAAGAACTTATTTACATAAATTGCTTGATAGTTTTATATATTCAATTATGAAATGTAGATCATTTGTCTGAACAGTTCTGTTTTCTCGCAGGTCCATCAATGTTTTGTTATTTTCTTGGTTGCTATCGGCTAGAACTTGGAAGCTATTGCAATGGAGGTTGCAAGTTGCAATGATGTTTTGTTGGTTTTCTAAATCTCTTTGTTGCTGGAAGTTGCAATGAGCCAGATAATGATGACTTTAGTTTGTAACTAACTCTATTTTAGTGATGGACACAAGTTTGTTGAACTTTCTTCTAGTGTTGTTGTGATGTTGTCTTGAGTCTTGA</genome_strand>
        <mrna_strand>TGACTTTGATATATTAATGTGGTGGAAAGTT-AATGAGCCGAGATTTCCTATTCTCGCGGAGATGGTTCGTAATGTGTTAGCCATTCCTATTTCAAGTGTCGCATCGGAATGTGCATTCAGCACAGGAGGTCGTGTTCTTGATCCCTTTAGGAGTTCATTAACTCCTAAAATTGTGCAATCTCTTATTTGTGTTCAAGATTGGCTTAGAAGTGAGTCTTTTCCAATCAATATTGAGGAAGATTTAGAGTATCTTGAACAACTTGAACTTG...................................................ATTTTGCTTTTAGTGGGACTGAATCTAGTATAATTGATATATAGTTGCAGCTTGTAAGTTCAACTATCAACTAGTGATGTGCGGTAATGA.................................................................................................GTCCATCAATGTTTTGTTATTTTCTTGGTTGCTATCTGCTAGAACTTGGAAGCTATTGCAATGGAGGTTGCAAGTTGCAATGATGTTTTGTTGGTTTTTAAAATCTATTTGTTGCTGGAAGTTGCAATGAGCTAGATAATGATGACTTTAGTTTGTAACTAACTCTATTTTAGTGATGGACACAAGTTTGTTGAACAAACTTCAACAAAAGTTGTGATGTTGTCTTGAGTCTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E707410" ref_strand="+" ref_description="SGN-E707410 [FA32DF11]">
      <seq>cgttttgagacgggtgccacctcacgaacttaacgctatgagttcaccttggccatttgtagcttggggaatggatgtcatcagttctatagagtctaccgcttctaatggacatagattcattttggttgccattgattatttcaccaagtgggtggaagcaaccccttacaagtcggtaaccaagaaagtggtggtcgattttgttcgcaacaatctgatatgcagatttggagttccagaatccatcattactgataacggggcaaatctcaacagtcatttgatgaaacagatatatgaacaatttaagttattcatcgaaagtcaactgcttatcgcccccaaatgaacagagctgtagaagccgccaacaaaaatatcaagaagattttgaggaaaatgattgacaaacagcggggttggcatgaaatgttgccatatgcttttctaggttatcgaacgacggtcagaacatcgacttgggctactccatacttgctagtatatggaacagaggcagtcgtgcctgttgaagtcgagataccgtcattgcggatcatccaagaagctgaattaagtaacgccgaatggcttagcaaacagattgatcaactagccttaattgataagaagagaatagttgcgtttgccatggcaagttgtacagacagagaatgactcgcgcttttcacaaaagagtaagagccaggaattttgaagttggtcagttggttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="102157" stop="100817"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101857" g_stop="101117" g_length="741"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="739" r_length="739" r_score="0.910"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E707410" ref_strand="+">
        <total_alignment_score>0.910</total_alignment_score>
        <cumulative_length_of_scored_exons>741</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E707410" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101857" e_stop="101117"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGATTTGATACAGGTACCACCTCACAAACTTAACGCCATGAGTTCACCTTGGCCCTTTGTAGCTTGGGGAATGGATGTCATCGGTCCTATAGAGCCAGCCGCTTCTAATGGGCACAGATTCATTCTAGTCGCCATTGATTATTTCACCAAATGGGTGGAGGCGGCTTCTTACAAGTCGGTAACCAAGAAAGTGGTGGCCGATTTTGTCCGCAACAATCTGATATGCAGATTTAGAGTTCCTGAATCCATCATTACTGATAACGACGCAAATCTCAACAGTCATTTGATGAAAGAGATATGTGAACAATTTAAGATTATTCATCGAAAGTCAACTGCCTATCGCCCCCAAATGAACGGAGTTGTAGAGGCCGCCAACAAGAATATCAAAAAGATTTTGAGGAAAATGATTGACAAACAGCGAGGTTGGCATGAAATGTTACCATATGCTTTACTAGGTTATCGAACGACGGTCAGAACATCGAC-TGGGCTACTCCATACTTGCTAGTATATGGAACAGAGACAGTCTTACCTGTTGAGGTCGAGATACCATAGTTGAGGATCATCCAAGAAGCTGAATTAAGTAACGCCGAATGGGTTAATAAATGGATTGATCAACTGGCTTTGATTGATGAGAAGAGAATGGTCGCCGTTTGCCATGGCCCAGTTGTATAGACAGAGAATGACTCGCGCTTTTCACAAAAGAGTAAGAGCCAGAAATTTTGAAGTTGGTCAGTTGGTTCT</genome_strand>
        <mrna_strand>CGTTTTGAGACGGGTGCCACCTCACGAACTTAACGCTATGAGTTCACCTTGGCCATTTGTAGCTTGGGGAATGGATGTCATCAGTTCTATAGAGTCTACCGCTTCTAATGGACATAGATTCATTTTGGTTGCCATTGATTATTTCACCAAGTGGGTGGAAGCAACCCCTTACAAGTCGGTAACCAAGAAAGTGGTGGTCGATTTTGTTCGCAACAATCTGATATGCAGATTTGGAGTTCCAGAATCCATCATTACTGATAACGGGGCAAATCTCAACAGTCATTTGATGAAACAGATATATGAACAATTTAAG-TTATTCATCGAAAGTCAACTGCTTATCGCCCCCAAATGAACAGAGCTGTAGAAGCCGCCAACAAAAATATCAAGAAGATTTTGAGGAAAATGATTGACAAACAGCGGGGTTGGCATGAAATGTTGCCATATGCTTTTCTAGGTTATCGAACGACGGTCAGAACATCGACTTGGGCTACTCCATACTTGCTAGTATATGGAACAGAGGCAGTCGTGCCTGTTGAAGTCGAGATACCGTCATTGCGGATCATCCAAGAAGCTGAATTAAGTAACGCCGAATGGCTTAGCAAACAGATTGATCAACTAGCCTTAATTGATAAGAAGAGAATAGTTG-CGTTTGCCATGG-CAAGTTGTACAGACAGAGAATGACTCGCGCTTTTCACAAAAGAGTAAGAGCCAGGAATTTTGAAGTTGGTCAGTTGGTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E357033" ref_strand="+" ref_description="SGN-E357033 [cTOS-22-C24]">
      <seq>actgaatagatatcatcgcccaactcaaaatagaaatcaatatatatcaagnattatcataaaatcaactatgatactcaacatgtagcaacaacaagcactatatcattaacaattaccgtcacgttcacacatgaggactcaagcctcaataccatactcatttgggaatcatgttcattagatttagtatattaacatctttcaagattcattatctttatttctcttgtgacggaacatgacattccgctccctcatattcattaatcctcttgtgtgaacacatgacactccgatcccctaaatctacatgacagtttcatgaacgctatcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="119988" stop="113214"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113850" g_stop="113514" g_length="337"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="337" r_length="337" r_score="0.911"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E357033" ref_strand="+">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>337</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E357033" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="113850" e_stop="113514"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTGAGTAGATATAATCGGCCAACTCAAAATAGAAAACAATATATACCAAGTAATATCATAAAATCAACTATGATACTCAACATGTAGCAACAACAAGTACTATATCATTAACAATTACCGTCAAGTTCACACATGAGGACTCAAGCCTCAATACCATACTCATTTGGGAATCATGTTCATTAGATTGAGTATATTAATATCTTTCAAGATTCATTATCTTTATTTCTCTTGTGTCGGTACGTGACACTCCGCTCCCTCATATCCATTAATCCTCTTGTGTCGGTACGTGACACTCCGATCCCCTAAATCTACGTGTC-GGTTCGTGACACCCGATCC</genome_strand>
        <mrna_strand>ACTGAATAGATATCATCGCCCAACTCAAAATAGAAATCAATATATATCAAGNATTATCATAAAATCAACTATGATACTCAACATGTAGCAACAACAAGCACTATATCATTAACAATTACCGTCACGTTCACACATGAGGACTCAAGCCTCAATACCATACTCATTTGGGAATCATGTTCATTAGATTTAGTATATTAACATCTTTCAAGATTCATTATCTTTATTTCTCTTGTGACGGAACATGACATTCCGCTCCCTCATATTCATTAATCCTCTTGTGTGAACACATGACACTCCGATCCCCTAAATCTACATGACAGTTTCATGA-ACGCTATCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E391780" ref_strand="+" ref_description="SGN-E391780 [TUS-24-O2]">
      <seq>tcacaaaccgacatatagatttaggggatcggagtgtcacgtaccgacacaagaggattaatgaatattgagggagcggagtgtcacgtaccgacacaagagaaataaagataatgaatcttgaaagatgttaatatactcaatctaatgaacatgattcccaaatgagtatggtattgaggcttgagtcctcatgtgtgaacttgacggtaattgttaatgatatagtatttgttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="113224" stop="114061"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113524" g_stop="113761" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="239" r_length="239" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-E391780" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>238</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E391780" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="113524" e_stop="113761"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACGAACCGACACGTAGATTTAGGGGATCGGAGTGTCACGTACCGACACAAGAGGATTAATGGATA-TGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATATTAATATACTCAATCTAATGAACATGATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTGACGGTAATTGTTAATGATATAGTACTTGTTGTT</genome_strand>
        <mrna_strand>TCACAAACCGACATATAGATTTAGGGGATCGGAGTGTCACGTACCGACACAAGAGGATTAATGAATATTGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAATGAACATGATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTGACGGTAATTGTTAATGATATAGTATTTGTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E246710" ref_strand="+" ref_description="SGN-E246710 [cLEF-45-O22]">
      <seq>cacaaaccgacatatagatttaggggatcggagtgtcacgtaccgacacaagaggattaatgaatattgagggagcggagtgtcacgtaccgacacaagagaaataaagataatgaatcttgaaagatgttaatatactcaatctaatgaacatgattcccaaatgagtatggtattgaggcttgagtcctcatgtgtgaacttgacggtaattgttaatgatatagtatttgttgttgctacatgttgagtatcatagttgattttatgatattacttggtatatatattgatttctattttgagttggccgatgatatctactcagtacccgtgttttgtactgacccctacttttatgttctcttcttgtttatttgtggagtgcagcaaacgtgccatcgtgttcaactcaacagtaattcaagccagtcttactacatcggaaattcagggtgagctaatgcttctagcttggact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="113225" stop="114303"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113525" g_stop="114003" g_length="479"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="481" r_length="481" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-E246710" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>479</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E246710" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="113525" e_stop="114003"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACGAACCGACACGTAGATTTAGGGGATCGGAGTGTCACGTACCGACACAAGAGGATTAATGGATA-TGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATATTAATATACTCAATCTAATGAACATGATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTGACGGTAATTGTTAATGATATAGTACTTGTTGTTGCTACATGTTGAGTATCATAGTTGATTTTATGATATTACTTGG--TATATATTGTTTTCTATTTTGAGTTGGCCGATTATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTTTTCTTCTTG-TTATTTGTGGAGTTCAGCAAACGCGCCGTCGTCTTCAACTCAACAGTAATTCTAGCCAGTCTTCGTCACACCGGATCTTCAGGGTGAGCTAACCCTTCTAGCTTGGACT</genome_strand>
        <mrna_strand>CACAAACCGACATATAGATTTAGGGGATCGGAGTGTCACGTACCGACACAAGAGGATTAATGAATATTGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAATGAACATGATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTGACGGTAATTGTTAATGATATAGTATTTGTTGTTGCTACATGTTGAGTATCATAGTTGATTTTATGATATTACTTGGTATATATATTGATTTCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATG-TTCTCTTCTTGTTTATTTGTGGAGTGCAGCAAACGTGCCATCGTGTTCAACTCAACAGTAATTCAAGCCAGTCTTACT-ACATCGGAAATTCAGGGTGAGCTAATGCTTCTAGCTTGGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E355026" ref_strand="+" ref_description="SGN-E355026 [cTOS-19-F16]">
      <seq>gaacacatccaaaaattctcaaactaccaaaactaattcaattgagggtacttggatagtgtcatccttgagatgtgccaagaaggatagacaacccttactaaccatcttctgagcacaaagaaaggagataatacgcaccggattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaacgtcaccgttttagcattacaatccaagatcgcaaaattgggagaaagccaagtcatacccagaattacatcaaagtcacccatttctaaagtaaccaaatctagataagtgttgctccccacgaaattcaccaaacaagacctatgtaccttttcaactatcacagactcacccaccggagtagaaacacgaataggcatgtcaagtaattcacaatgcaattttagaccattagcaaatgatgaagatacatatgaaaacgtggagccagggtcaaataatacagatgccatgcaatcacaaaccaagagattacctgtgataacagcatcagacgcctctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="115627" stop="114485"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115327" g_stop="114785" g_length="543"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="543" r_length="543" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E355026" ref_strand="+">
        <total_alignment_score>0.904</total_alignment_score>
        <cumulative_length_of_scored_exons>543</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E355026" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115327" e_stop="114785"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACACATCCAGAAACTCGCGGACCACCGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACGCACCGGATTGGAAGTGTAGTCACCCTTCCACACTAACGGAACTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACGAAGTTCACCAAACAGGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGAATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGC</genome_strand>
        <mrna_strand>GAACACATCCAAAAATTCTCAAACTACCAAAACTAATTCAATTGAGGGTACTTGGATAGTGTCATCCTTGAGATGTGCCAAGAAGGATAGACAACCCTTACTAACCATCTTCTGAGCACAAAGAAAGGAGATAATACGCACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAAATTGGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAGTCACCCATTTCTAAAGTAACCAAATCTAGATAAGTGTTGCTCCCCACGAAATTCACCAAACAAGACCTATGTACCTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGTAATTCACAATGCAATTTTAGACCATTAGCAAATGATGAAGATACATATGAAAACGTGGAGCCAGGGTCAAATAATACAGATGCCATGCAATCACAAACCAAGAGATTACCTGTGATAACAGCATCAGACGCCTCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E355244" ref_strand="+" ref_description="SGN-E355244 [cTOS-18-K20]">
      <seq>cggaaactcccatccttcttcttcacaaacaaaatcggagcaccccaaggagatgcacttggtctaatgaaacctttgctcaacaactcttgaagttgggcctttaactctcttaactctacgggagccattctataagggggtatagaaatggggcgtgtgcccggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcagggaacacatccaaaaactcacagactataaaaaccgactcaatcgaaggtacttgggtagtgtcatccttgagatgtgccaagaaagctaaacaccctttactaaccattttcttagcacgaagaaaggagatgatgcacaccggattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaatgtcaccgttttagcattacaatccaagatcgcaaattgcggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaaatctacataagtgttgctccccacaaagttcaccaaacaagacctatataccttttcaactaccacagactcacccaccggagtagaaacacgaataggcatatcaagtaattcacaatgtaaatttagaccgttagcaaatgaggaagatacantagaaaacgtggatcccaggatcaacaatacagaagccatgcaatcacaatcgaaagattacctgtgatgacagcatctaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="115854" stop="114493"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115554" g_stop="114793" g_length="762"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="761" r_length="761" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E355244" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>762</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E355244" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115554" e_stop="114793"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAACTCCCATCCTTCTTCTTTACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATAAAGCCTTTGTTTAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCTGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCCGGTTCAAGATCAATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCGCGGACCACCGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACGCACCGGATTGGAAGTGTAGTCACCCTTCCACACTAACGGAACTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACGAAGTTCACCAAACAGGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGAATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGAT-CCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGAT</genome_strand>
        <mrna_strand>CGGAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAACCTTTGCTCAACAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCTACGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCCGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAAAAACTCACAGACTATAAAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATGCACACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAATGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCGTTAGCAAATGAGGAAGATACANTAGAAAACGTGGATCCCAGGATC-AACAATACAGAAGCCATGCAATCACAATCGA-AAGATTACCTGTGATGACAGCATCTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E352716" ref_strand="+" ref_description="SGN-E352716 [cTOS-11-H19]">
      <seq>gatctgtcccaggcttggctaacgtcacagttttagcattacaatccaagattgcaaaatttggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaagtctacataagtattgctccccacaaaagtcaccagaccagacctatatactttttcaactatcacagactcacccaccggagtagaaacacgaataggcatgtcaagcaattcataatttaatttaagaccagtagcaaatgaggaagatacatatgaaaatgtggatccagggtcaaataatacaaaagccatgcaatcacaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="115451" stop="114525"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115151" g_stop="114821" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="331" r_length="331" r_score="0.903"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E352716" ref_strand="+">
        <total_alignment_score>0.903</total_alignment_score>
        <cumulative_length_of_scored_exons>331</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E352716" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115151" e_stop="114821"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACGAAGTTCACCAAACAGGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGAATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAG</genome_strand>
        <mrna_strand>GATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAGTCTACATAAGTATTGCTCCCCACAAAAGTCACCAGACCAGACCTATATACTTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAATTCATAATTTAATTTAAGACCAGTAGCAAATGAGGAAGATACATATGAAAATGTGGATCCAGGGTCAAATAATACAAAAGCCATGCAATCACAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E351414" ref_strand="+" ref_description="SGN-E351414 [cTOS-12-D7]">
      <seq>cggaaactcccatccttcttcttcacaaacaaaatcggagcaccccaaggagatgcacttggtctaatgaaacctttgctcaacaactcttgaagttgggcctttaactctcttaactctacgggagccattctataagggggtatagaaatggggcgtgtgcccggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcagggaacacatccaaaaactcacagactataaaaaccgactcaatcgaaggtacttgggtagtgtcatccttgagatgtgccaagaaagctaaacaccctttactaaccattttcttagcacgaagaaaggagatgatgcacaccggattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaatgtcaccgttttagcattacaatccaagatcgcaaattgcggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaaatctacataagtgttgctccccacaaagttcaccaaacaagacctatataccttttcaactaccacagactcacccaccggagtagaaacacgaataggcatatcaagtaattcacaatgtaaatttagaccgttag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="115854" stop="114594"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115554" g_stop="114894" g_length="661"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="661" r_length="661" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E351414" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E351414" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115554" e_stop="114894"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAACTCCCATCCTTCTTCTTTACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATAAAGCCTTTGTTTAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCTGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCCGGTTCAAGATCAATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCGCGGACCACCGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACGCACCGGATTGGAAGTGTAGTCACCCTTCCACACTAACGGAACTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACGAAGTTCACCAAACAGGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGAATATCAAGTAATTCACAATGTAAATTTAGACCATTAG</genome_strand>
        <mrna_strand>CGGAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAACCTTTGCTCAACAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCTACGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCCGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAAAAACTCACAGACTATAAAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATGCACACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAATGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCGTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E355232" ref_strand="+" ref_description="SGN-E355232 [cTOS-18-A6]">
      <seq>tcaatgcgaggaagaggatacttgttcttaatagttaccttgttcagttgtctgtagtctatgcacattctaaaacttccatccttcttcttcacaaataaaactggagcaccccaaggagatgcacttggtctaatgaagaccttgctcaacaactcttgaagttgagcctttaactctcttaattcggcgggagccattctataagggggtatagaaatggggcgtgtgcctggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcaggaaacacgtccaaaaactcgcggactaccgaaaccgactcaattgagggtacttgagtagtgtcatccttgagatgtgccaagaaagctgaacaccctttactaaccattttcttagcacgaagaaaggatatgatacgcaccagattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaacgtcaccgttttagcattacaatccaagatcgcaaaatttggagaaagccaagtcatacccagaattacatcaatgtcacccatttctaaaaaaccaaatctacataagtgttgctccccacgaaattcnacaaaacagaactatgtaccttttcaactaccac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="115923" stop="114665"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115623" g_stop="114965" g_length="659"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="658" r_length="658" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E355232" ref_strand="+">
        <total_alignment_score>0.917</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E355232" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115623" e_stop="114965"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATGCGAGGAAGAGGGTACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTTACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATAAAGCCTTTGTTTAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCTGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCCGGTTCAAGATCAATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCGCGGACCACCGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACGCACCGGATTGGAAGTGTAGTCACCCTTCCACACTAACGGAACTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACGAAGTTCACCAAACAGGACCTATATACCTTTTCAACTACCAC</genome_strand>
        <mrna_strand>TCAATGCGAGGAAGAGGATACTTGTTCTTAATAGTTACCTTGTTCAGTTGTCTGTAGTCTATGCACATTCTAAAACTTCCATCCTTCTTCTTCACAAATAAAACTGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGACCTTGCTCAACAACTCTTGAAGTTGAGCCTTTAACTCTCTTAATTCGGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCTGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGAAACACGTCCAAAAACTCGCGGACTACCGAAACCGACTCAATTGAGGGTACTTGAGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTGAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGATATGATACGCACCAGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAATGTCACCCATTTCTAA-AAAACCAAATCTACATAAGTGTTGCTCCCCACGAAATTCNACAAAACAGAACTATGTACCTTTTCAACTACCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E368762" ref_strand="+" ref_description="SGN-E368762 [TUS-22-P2]">
      <seq>gtctcacccaattcttcactgtctcaatcttacaaggatccaccatcactccatccttagaaaccacgtgccccaagaaggacactgcatctatccaaaactcacacttagagaacttggcataaagctttttctccctcaacatttctaatacaattctcaaatgctcctcatgttccttcttactattagagtatatcagtatatcatcaataaacatgatgacaaagagatccaaatatggcttaaaatcccgttcatcaagctcatgaacgcagcaggggcattcgtaagaccaaaagacatcactacaaattcgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagagaagacacaagcaccttgtaactgatcgaacaagtcatcaatgcgaggaagtggatacttgttcttaatagttaccttgttcaactgccggtagtctatgcacatccgaaaactcccatccttcttcttcacaaaccaaaccggagcaccccaaggagatgcacttggtctaatgaagactttgctcaaaaactcttgaagttgggcctttaactctcttaactccgcgggagccattctataagggggtatagaaatggggcgagtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="116372" stop="115094"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116072" g_stop="115393" g_length="680"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="679" r_length="679" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E368762" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E368762" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116072" e_stop="115393"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCATGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAAAATTTCCAATACCATTCTCAAATGCTCCTCATGTTCTTTCTTGCTCTTTGAGTATATCAGTATATCATCAATAAATACGATCACGAAGAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGATCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTCGTTTGAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACTGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGGTACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTTACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATAAAGCCTTTGTTTAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCTGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTA</genome_strand>
        <mrna_strand>GTCTCACCCAATTCTTCACTGTCTCAATCTTACAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTATCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCTAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTATTAGAGTATATCAGTATATCATCAATAAACATGATGACAAAGAGATCCAAATATGGCTT-AAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGTGGATACTTGTTCTTAATAGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTCACAAACCAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGACTTTGCTCAAAAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E379315" ref_strand="+" ref_description="SGN-E379315 [TUS-1-J2]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatgcgaggaagaggatacttgttctttatggttaccttgttncactgccggtagcctatgcacatccgaaaactccaatccttcttctttacaaacaaaaccggagcaccccaaggagatgcagttggtctaatgaagcctttgctcacaactctttgaagtggtcttttaactctcttaactctgcgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="116443" stop="115131"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116143" g_stop="115431" g_length="713"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="712" r_length="712" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E379315" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E379315" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116143" e_stop="115431"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACGAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCATGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAAAATTTCCAATACCATTCTCAAATGCTCCTCATGTTCTTTCTTGCTCTTTGAGTATATCAGTATATCATCAATAAATACGATCACGAAGAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGATCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTCGTTTGAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACTGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGGTACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTTACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATAAAGCCTTTGTTTAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCTGCGG</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTNCACTGCCGGTAGCCTATGCACATCCGAAAACTCCAATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCAGTTGGTCTAATGAAGCCTTTG-CTCACAACTCTTTGAAGTGGTCTTTTAACTCTCTTAACTCTGCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E375319" ref_strand="+" ref_description="SGN-E375319 [TUS-15-F18]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatgcgaggaagaggatacttgttctttatggttaccttgttcaactgccggtagcctatgcacatccgaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="116443" stop="115248"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116143" g_stop="115548" g_length="596"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="596" r_length="596" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E375319" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E375319" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116143" e_stop="115548"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACGAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCATGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAAAATTTCCAATACCATTCTCAAATGCTCCTCATGTTCTTTCTTGCTCTTTGAGTATATCAGTATATCATCAATAAATACGATCACGAAGAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGATCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTCGTTTGAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACTGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGGTACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAAC</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGCCTATGCACATCCGAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E204434" ref_strand="+" ref_description="SGN-E204434 [cLEC-13-J16]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="116443" stop="115318"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116143" g_stop="115618" g_length="526"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="526" r_length="526" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E204434" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E204434" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116143" e_stop="115618"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACGAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCATGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAAAATTTCCAATACCATTCTCAAATGCTCCTCATGTTCTTTCTTGCTCTTTGAGTATATCAGTATATCATCAATAAATACGATCACGAAGAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGATCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTCGTTTGAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACTGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATG</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E240817" ref_strand="+" ref_description="SGN-E240817 [cLED-24-J5]">
      <seq>gtctcacccatttcttcactgtctcaatcttaccaggatccaccatcactccatccttagaaaccacgtgccccaagaaggacactgcatctatccaaaactcacacttagagaacttggcataaagctttttctccctcaacatttctaatacaattctcaaatgctcctcatgttccttcttactattagaggatatcagtatatcatcaatgaacatgatgacgcagagatccaaatatggcttaaaatcccgttcatcaagctcatgaacgcagcaggggcattcgtaagaccaaaagacatcactacaaattcgtaatgcccatacctggttctaaaagcagtctttggcaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="116372" stop="115414"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116072" g_stop="115714" g_length="359"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="358" r_length="358" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E240817" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>359</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E240817" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116072" e_stop="115714"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCATGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAAAATTTCCAATACCATTCTCAAATGCTCCTCATGTTCTTTCTTGCTCTTTGAGTATATCAGTATATCATCAATAAATACGATCACGAAGAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGATCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTCGTTTGAAAAGCAGTCTTTGGCACA</genome_strand>
        <mrna_strand>GTCTCACCCATTTCTTCACTGTCTCAATCTTACCAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTATCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCTAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTATTAGAGGATATCAGTATATCATCAATGAACATGATGACGCAGAGATCCAAATATGGCTT-AAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E577888" ref_strand="+" ref_description="SGN-E577888 [LE08BA01]">
      <seq>ctacatctcctaccatacaatgcttcaaatggagccatatcaatgcttgattgatagctattattgtatgaaaactccgctaagggtaggaagctatcccaatgaccaccaaactctatcacacacgcacgaagcatattctccaacacttgaatcgttcgctcagactgaccatcgggagaactagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="117924" stop="117147"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="117624" g_stop="117448" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E577888" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>177</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E577888" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="117624" e_stop="117448"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACATCTCCTACCATACAATGCTTCAAATGGAGCCATATCAATGCTTGAGTGATAGCTATTATTGTATGAAAATTCCGCTAAGGGTAAGAAGCTATCGCAATGGCCACCAAACTCTATCACACATGCGCGAAGCATATCCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</genome_strand>
        <mrna_strand>CTACATCTCCTACCATACAATGCTTCAAATGGAGCCATATCAATGCTTGATTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAGGAAGCTATCCCAATGACCACCAAACTCTATCACACACGCACGAAGCATATTCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E561175" ref_strand="-" ref_description="SGN-E561175 [17126]">
      <seq>ttctaagttcatttacttcattccaatcactatcattaagtttaaattcaggataagcattatgactattaaattgcatagtaataggctctttatatgtataagcaacttcaagcatttcataaaaggaattccatctagtttttacatgcttcggaacttttctaaacggaagtttacatgcattacaaagctctttaaattgattaattctactactactattcatatgaaaaatataaaaacaagcattatcaactttatcacaactattttcaaataatttcacaccgtcactaacaaccaaatttaatatatgcgcagcacatctaacatgaaaagcatatttactaataggacaaagtctagtttctagcatattaatagcatttaaattagcagaagcattatctaaagtaatactaatgactttatcacaaagaccgaaaaaatctaaaatttccaacacagtagtagcaatatacattccagtttttttcttttgacaaattttataaccaataattcttttttgtaaattccaattataatcagtccaatgcgcagtaacagttaaataatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="123246" stop="125823"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="123546" g_stop="123650" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="105" r_length="105" r_score="0.905"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="123651" i_stop="125045" i_length="1395">
            <donor d_prob="0.000" d_score="0.86"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="125046" g_stop="125523" g_length="478"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="584" r_length="479" r_score="0.912"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-E561175" ref_strand="-">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>583</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E561175" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="123546" e_stop="123650"/>
          <exon e_start="125046" e_stop="125523"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTAAGTTCATTTACTTCATCCTAATCACTATCATTATGTTTAAATTCAGGATAATCATTATAATTATTAAATAGCATAGTAATAGGTTGTCTATATGTATAAGTGTTGCGGTCAAAGCATACACGCACGTGCACGTGATCGTACAAGCAATATAATGGCCCTTGTTAAGGAGCCGAATGTCGTTCCCACAAGGGACTTCAGTCTAGACTATACTAACTTTTCCAACTCTCATCTTCAATCCAAGTGCAATTTCCAGATTTTATAAAAAATGTTAAATTGTAATTATATGTAACTAAAAGTAACTATGGTGATTCAATTTCTTAAGTTTCAAACAATAATATGAGAAACATCTAGGACTACAGCTTTTATCAGGAATCATGAAAATTGTTATCTTTTACTAAAGATTTTCTTGAAATTATATCCTCGTTGAACCACAGGGTTAGATATATGATTATGGTCTCTCGACCTCTAATCGAATACAACAGTTACCACCCTAACTACATTGTTGAGCGCGGATAAGGTGAATAAGAGTTGATCATTAAGTTATCTTCCTGTATGGTGATCCAAACAAGATTTCTAGGTATACATCTATCCTAGAAACGAATCAACTCTAGCTATTTAGCGTCAACTGAACTTCTTACATTCCATGTTATATCCTCTTATTTCTATCTCGATTTCAATTTGGACAATGAGTTTATTTCTATGGTGGTCAATCATGAAATTCAAAAAACAAGAACATAAGAACGAATCATCGATAACTCATAGTAAAATCCTTAACAACCTAAACAAGTTTCATTCATCATGTAGCCACAACCCTAGAACTAGGGTGTTTCGCTACTCATAATCTCCAAAACAATCATCCAATGTATATAAATCATTCCCCAGAATTTAAAGATGAAAGATAGAATATAATCCTAAAAACTTTCAGAGTAGCGTTCGTGATTCTCCCCATTCGAAAATTAGAAAAAAGAATGATTATAAAATTATAATAAGGCCCTATTTATACTAAAGTCGAATTTACCAAAATAGGGCTCCAGGCGCGCGACCGCAAAAGTCTTTAATTATTTGGATCAATACGGAGGCCTTCAGCGCGACGAGGAGGTAGTACGAAATCCTCTGCCTCAAAATTTAATTCCAGACTTAAGATTCTTCAACTGGTTGCGCGACGCGGAGACTACACGTAGTCTACTGCTTCGAAATAAATAGCTTGATAATCCTCTCCCTTCTGTGCGACGCGTAGCTGACACTTAAATGCCTTTGAGGCATTTCTTAAACTTCATTTTCTCCACTTCCTCCTTAGATTTTCAGGTCGCTTTTTTTCCCTTTTTGTGCACATTTTTTCACATAGTCTCCCTACACAACTAATCACGTCAGTTAGTTCAGAAACACAACATTAACCCAATATGACAAGTTAACCTAAATTTAACGACTTCAAACTAAGCCTAATAATGGGTAAAATTAGCACTATGGGCACACAAATATGCCTAAGATCAATAAGCAACTTCAAACATATCATAAAAGGAATTCCATCTATTTTTTACATGCTTCAGAACTTTTTTAAACGAAAGTTTGAATGCGTTACAAAGCTCTTTAAATTGATTAATTCTAATACTATTATTCATATGAAAAATATAAAAACAAGCATTATCAATTTTATCACAACTATTTTCAAATAATTTCATACCTTCACTAACAATCAAATTTAATATATGCGCAACATATCTAGCATGAAAA-CATATTTATTAATAGGACAAAGTCTATGTTCTAGCATATTAGTAGCATATAAATTAGCAGAAGTATTATCTAAAGTAATACTAATGACTTTATCACAAAGACCGAAAAAATTTGAAATTTTCATTACTGTAGTAGCAATACACGTTCGAGTTTTTTTCTTTTGACAAATTTTATAACCAATAATTCTTTTTTGTAAATTTCAACTATACTCAATCCAATGCGCAATTATAGTTAAATAATCA</genome_strand>
        <mrna_strand>TTCTAAGTTCATTTACTTCATTCCAATCACTATCATTAAGTTTAAATTCAGGATAAGCATTATGACTATTAAATTGCATAGTAATAGGCTCTTTATATGTATAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTTCAAGCATTTCATAAAAGGAATTCCATCTAGTTTTTACATGCTTCGGAACTTTTCTAAACGGAAGTTTACATGCATTACAAAGCTCTTTAAATTGATTAATTCTACTACTACTATTCATATGAAAAATATAAAAACAAGCATTATCAACTTTATCACAACTATTTTCAAATAATTTCACACCGTCACTAACAACCAAATTTAATATATGCGCAGCACATCTAACATGAAAAGCATATTTACTAATAGGACAAAGTCTAGTTTCTAGCATATTAATAGCATTTAAATTAGCAGAAGCATTATCTAAAGTAATACTAATGACTTTATCACAAAGACCGAAAAAATCTAAAATTTCCAACACAGTAGTAGCAATATACATTCCAGTTTTTTTCTTTTGACAAATTTTATAACCAATAATTCTTTTTTGTAAATTCCAATTATAATCAGTCCAATGCGCAGTAACAGTTAAATAATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E447237" ref_strand="+" ref_description="SGN-E447237 [cSTA-25-K24]">
      <seq>gttcaaggtgaattaaatacttcgaacccaagtggtcctcttacacatcgaacctataataaggatcgtgatcgtgaaaattttgctaaaatggttgttgtttgtggtttaccttttagttttggagaacatccgggttttattgcatatattcgtgatacatataatcctagttttaaaggtttatcaagaagcatggtaaaaagagatatttttgaatttcaagaaaaacattgtcaatatttgcgtgcctattttgaaataatggattgtagagttgctattaccactgatatgggtcgtagtcctaatggttttgattatttaactgttactgcgcattggactgattataattggaatttacaaaaaagaattattggttataaaatttgtcaaaagaaaaaaactggaatgtatattgctactactgtgttggaaattttagattttttcggtctttgtgataaagtcattagtattactttagataatgcttctgctaatttaaatgctattaatatgctagaaactagactttgtcctattagtaaatatgcttttcatgttagatgtgctgcgcatatattaaatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="126138" stop="124945"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125839" g_stop="125245" g_length="595"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="597" r_length="597" r_score="0.901"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E447237" ref_strand="+">
        <total_alignment_score>0.901</total_alignment_score>
        <cumulative_length_of_scored_exons>595</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E447237" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125839" e_stop="125245"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCTAGATGAATGAAATACTTCGAACTCAAGTGGTCCTCTTACACATCAAACCTATAAAAAGGATTGTTATCGATTTTTTTTTGCTAAAATGGTTGTTGTTTGTTGTTTATCTTTTCATTTTGGAGAACATCCAGGTTTTATTGCATATATTCGTGAAACATATAGTCCTAGTTTTAAAGGTTTATCAAGAATCATGGT-AAAAGAAATATTTTTGAATTTCAAGAAAAACATTGTCAATATTTGTGTGCCTATTTTGAACCGATGGATTGTAAAGTTGCTATTACCACTTATATGGGTCGTAGTCCTAATGGTTTTGATTATTTAACTATAATTGCGCATTGGATTGAGTATAGTTGAAATTTACAAAAAAGAATTATTGGTTATAAAATTTGTCAAAAGAAAAAAACTCGAACGTGTATTGCTACTACAGTAATGAAAATTTCAAATTTTTTCGGTCTTTGTGATAAAGTCATTAGTATTACTTTAGATAATACTTCTGCTAATTTATATGCTACTAATATGCTAGAACATAGACTTTGTCCTATTAATAAATATG-TTTTCATGCTAGATATGTTGCGCATATATTAAATTTG</genome_strand>
        <mrna_strand>GTTCAAGGTGAATTAAATACTTCGAACCCAAGTGGTCCTCTTACACATCGAACCTATAATAAGGATCGTGATCGTGAAAATTTTGCTAAAATGGTTGTTGTTTGTGGTTTACCTTTTAGTTTTGGAGAACATCCGGGTTTTATTGCATATATTCGTGATACATATAATCCTAGTTTTAAAGGTTTATCAAGAAGCATGGTAAAAAGAGATATTTTTGAATTTCAAGAAAAACATTGTCAATATTTGCGTGCCTATTTTGAAATAATGGATTGTAGAGTTGCTATTACCACTGATATGGGTCGTAGTCCTAATGGTTTTGATTATTTAACTGTTACTGCGCATTGGACTGATTATAATTGGAATTTACAAAAAAGAATTATTGGTTATAAAATTTGTCAAAAGAAAAAAACTGGAATGTATATTGCTACTACTGTGTTGGAAATTTTAGATTTTTTCGGTCTTTGTGATAAAGTCATTAGTATTACTTTAGATAATGCTTCTGCTAATTTAAATGCTATTAATATGCTAGAAACTAGACTTTGTCCTATTAGTAAATATGCTTTTCATGTTAGATGTGCTGCGCATATATTAAATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E447233" ref_strand="+" ref_description="SGN-E447233 [cSTA-25-K12]">
      <seq>ttttattgcatatattcgtgatacatataatcctagttttaaaggtttatcaagaagcatggtcaaaagagatatttttgaatttcaagaaaaacattgtcaatatttgcgtgcctattttgaaataatggattgtagagttgctattaccactgatatgggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="126002" stop="125241"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125702" g_stop="125541" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="163" r_length="163" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E447233" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>162</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E447233" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125702" e_stop="125541"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTATTGCATATATTCGTGAAACATATAGTCCTAGTTTTAAAGGTTTATCAAGAATCATGGT-AAAAGAAATATTTTTGAATTTCAAGAAAAACATTGTCAATATTTGTGTGCCTATTTTGAACCGATGGATTGTAAAGTTGCTATTACCACTTATATGGGT</genome_strand>
        <mrna_strand>TTTTATTGCATATATTCGTGATACATATAATCCTAGTTTTAAAGGTTTATCAAGAAGCATGGTCAAAAGAGATATTTTTGAATTTCAAGAAAAACATTGTCAATATTTGCGTGCCTATTTTGAAATAATGGATTGTAGAGTTGCTATTACCACTGATATGGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E547123" ref_strand="-" ref_description="SGN-E547123 [TUS-70-N12]">
      <seq>cttgagcggaaagtatgttcttgtggtagatttcaactagatgagataccttgttcacatgcaatcgctgtattgaaaaaaaagaatgtcaccgatatgaatccgtattgctctgattattacaagcctgatgcattggcaaaaacatatgaaatttcaatggtaccaatgccagataaggaagattggtcagatcctaataatgtggtagctgaaactgtgtatccacctagatacagaagatcatctggacgaccaagaaaaagaagaagaaagaatgcagatgaaaagatttcggtgaacacaaactgttgtggacaatgtggacaagaaggaaacaacggaagaacttgtactttctacccaaaagagaagtgaattagtcgtaatgtttttatgatatcaagaataatttataacgtaaatattttaatgaatttcagttttcattacagttgaaaattgaacactttttgtttagataaataaacttaataacatgtgataattaaattgaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="133070" stop="134188"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="133370" g_stop="133888" g_length="519"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="518" r_length="518" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="519" polyA_stop="529"/>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-E547123" ref_strand="-">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E547123" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="133370" e_stop="133888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGAGCGGAAAGTATGTTGTTGTGGTAGATTTCAACTAGATGAGATACCTTGTTCACATGCAATCACTGTATTGAAAAAAAAGAATGTCACCGATATAAATCCGTATTGCTCTGATTATTACAAGCCTGATGCGTTGGCAAAAATATATGAAATTCCAATGGTGCCAATGCCAGATAAGAAAGATTGGTCAGATCCTAAACACGTGGTAGCTGAAACTGTGCATCCACCTAGATACAGAAGATCATCTGGACGACCAAGAAAAAGAAGAAGAAAGAATGCAGATGAAAAGATTTCGGTGAACACAAACTGTTGTGGACAATGTGGACAAGAAGGGCACAACAGAAGAACTTGTACTTTCTACCCAAAAGAGAAGTGAATTAGTCGCAATGTTTCTATGATATCAAGAATAATTTATAACGTAAACATTTTAATGAATTTCAGTTTTCATTACAACTGCAAATTGAACACTTTTTGTTTAGATAAATAAACGTACAAACATGTGGTAATTAAATTTGAA</genome_strand>
        <mrna_strand>CTTGAGCGGAAAGTATGTTCTTGTGGTAGATTTCAACTAGATGAGATACCTTGTTCACATGCAATCGCTGTATTGAAAAAAAAGAATGTCACCGATATGAATCCGTATTGCTCTGATTATTACAAGCCTGATGCATTGGCAAAAACATATGAAATTTCAATGGTACCAATGCCAGATAAGGAAGATTGGTCAGATCCTAATAATGTGGTAGCTGAAACTGTGTATCCACCTAGATACAGAAGATCATCTGGACGACCAAGAAAAAGAAGAAGAAAGAATGCAGATGAAAAGATTTCGGTGAACACAAACTGTTGTGGACAATGTGGACAAGAAGGAAACAACGGAAGAACTTGTACTTTCTACCCAAAAGAGAAGTGAATTAGTCGTAATGTTTTTATGATATCAAGAATAATTTATAACGTAAATATTTTAATGAATTTCAGTTTTCATTACAGTTGAAAATTGAACACTTTTTGTTTAGATAAATAAACTTAATAACATGTGATAATTAAA-TTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-Df2UWw/sgn_ests_tomato_potato" ref_id="SGN-E245630" ref_strand="+" ref_description="SGN-E245630 [cLEF-43-P3]">
      <seq>tcgtgccgattttgataaaagcaaatcactcccagctgatgcaatctattagcaaagagaacatcaattttcaggctgatacaagcacatttcagtctgacaaacaaacatctcagcaaataccggttgatctcgatgatatgggtggtgtagctgaggatggtggtggtttttctggtaaaaatggtgagcatcatatcgtcgacgatgcaggggatgtcgatgtggatggtgttggtgttgccgtaaatgagggtgaaccaatagtcactgatccaaaggatggtgacgcacatcagtcgcaccaagatttaaatgaacatatcatggaccaagccgttgacgacaatgttcatcacaacatccctcatatgttgcccgaaaaaacaacaacagattcatcggattcttcaacttcaacaacaatatcgccatcaactcaagcagcaatagaagcacttatcaaagatttgggtaaagatgctaccaatgctagaccattatattcttacgatccaaagaatataactagcagccagtacttgttgaccgacagtcaattacccactgaaattccaataacggagattgctgttaaaactgatgcagtcactcctgcgcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-zQYTW/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="137592" stop="136092"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="137300" g_stop="137018" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="281" r_length="281" r_score="0.908"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="137017" i_stop="136817" i_length="201">
            <donor d_prob="0.963" d_score="0.84"/>
            <acceptor a_prob="0.971" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="136816" g_stop="136694" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="403" r_length="122" r_score="0.951"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="136693" i_stop="136613" i_length="81">
            <donor d_prob="0.991" d_score="0.92"/>
            <acceptor a_prob="0.908" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="136612" g_stop="136392" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="404" r_stop="623" r_length="220" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-E245630" ref_strand="+">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>627</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E245630" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="137300" e_stop="137018"/>
          <exon e_start="136816" e_stop="136694"/>
          <exon e_start="136612" e_stop="136392"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTGATTATTTTGATAAAAGCAAATCAC-ACCAGCTGATGCGATCCATTAGAAAAGAGAACATCAATTTCCAGGCTGATACAAGCACATTTCAGTCTAACAAACAAACATCTCAGCAAATACCAGTTGATCTCGATGATATGGGTGGTGTAGCTGAGGATGGTGGTGGTTTTTCTGGTAAAAATGGTGAGCATCATATCGTCGACAATGCAAGGGATGTCGATATGGATGGTGTTGGTGTTTCCGTAAATGAGGGTGAATAAATAGTCAGTGATAATCTAAAGGTAATGTTTATGATACATTGGGTATGTTGTGTATCATGCTTATATAGTCAATGCTTTGTATCATGATCATTTTTTTATCATTTTATATTCTGTCATGTATCATGCATATTTACTCAATACTATGTGTCATGTGATTGTAATCAATGTTACGTATCAGCACAAATTATATTAACAGTTTTTATTTCAAAACTGCATATTCAGGATGGTGACGCACATCAGTCGCACCAAGAATTAAATGAACATATCATGGACCAAGCCGTTGATGACAATGTTCATCACAACATCTCTCATGTGTTGCCCGAAAAAACAACAACGGATTCATCGGTACATTTTTCAATTTTGATTTATGACACACAATTTCATTACACACAAATTTATTCTAAAAATCATTAAATCATATTATAGAGGATTCTTCAACTTCAACAACAATATCGCCATCAACTCAAGCGGCAATAGATGCGCTTATCAAAGATTTGGGTAAAGATGCTACTAATGCTAGACCATTATATTCTTACGATTCACAGAATATAACTAGCAGCCAGTACTTGTTGATCGACCGTCAATTACCCACTGATATTCCAATAACGGAGATTGCTGTTAAATCTGATGCAGTCACTCCTGCGCAT</genome_strand>
        <mrna_strand>TCGTGCCGATTTTGATAAAAGCAAATCACTCCCAGCTGATGCAATCTATTAGCAAAGAGAACATCAATTTTCAGGCTGATACAAGCACATTTCAGTCTGACAAACAAACATCTCAGCAAATACCGGTTGATCTCGATGATATGGGTGGTGTAGCTGAGGATGGTGGTGGTTTTTCTGGTAAAAATGGTGAGCATCATATCGTCGACGATGCAGGGGATGTCGATGTGGATGGTGTTGGTGTTGCCGTAAATGAGGGTGAACCAATAGTCACTG---ATCCAAAG.........................................................................................................................................................................................................GATGGTGACGCACATCAGTCGCACCAAGATTTAAATGAACATATCATGGACCAAGCCGTTGACGACAATGTTCATCACAACATCCCTCATATGTTGCCCGAAAAAACAACAACAGATTCATC-.................................................................................-GGATTCTTCAACTTCAACAACAATATCGCCATCAACTCAAGCAGCAATAGAAGCACTTATCAAAGATTTGGGTAAAGATGCTACCAATGCTAGACCATTATATTCTTACGATCCAAAGAATATAACTAGCAGCCAGTACTTGTTGACCGACAGTCAATTACCCACTGAAATTCCAATAACGGAGATTGCTGTTAAAACTGATGCAGTCACTCCTGCGCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>78</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="10933" PGL_stop="14505"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="10933" e_stop="10979"/>
            <exon e_start="14113" e_stop="14505"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.872"/>
          <exon-only e_score="0.975"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.872">
            <gDNA_exon_boundary e_start="10933" e_stop="10979" e_length="47"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="10980" i_stop="14112" i_length="3133"/>
          </intron>
          <exon e_serial="2" e_score="0.975">
            <gDNA_exon_boundary e_start="14113" e_stop="14505" e_length="393"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10933" stop="10979"/>
              <exon start="14113" stop="14505"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E543311" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTTTTTTTTTTTTTTTTTTTAAAATTTTTTTTTTTTTTTTCTTTTT : TTAGGATTTAAGCATCATCTGATCACTAGAAAAATCCCCTTGTGTTGTTCTTCCAAGTACACTCTCATGTCTTACAAACTCACCGTACATGTCAAGGGTCAAGCCTCTTCCGTACCCCAACCCCTCAAAGAATCTAGTCTCTAACAAATGGTAGGACAAACCAAACTATAAATTCCAAAAATAATGTATAACTCATCTACTCCTAAAATATGGTGCAAACTGCTGTCTGATCAGCAATCCCCATGTATCAAAGCTGAATCCAACTTGTCAAGCTCCAATTGCCAAAATCATCCAAGACATTATTCAATTCAATTCATGTTGCACTAGTGTTGAAGAGATCAATGTTGAAGCACTGGTTCCTTGCCGGTCTTGCAATATTAAAGTTGAGCAAAA</gDNA_template>
            <first_frame> I  F  F  F  F  F  F  K  I  F  F  F  F  F  F  F :   *  D  L  S  I  I  *  S  L  E  K  S  P  C  V  V  L  P  S  T  L  S  C  L  T  N  S  P  Y  M  S  R  V  K  P  L  P  Y  P  N  P  S  K  N  L  V  S  N  K  W  *  D  K  P  N  Y  K  F  Q  K  *  C  I  T  H  L  L  L  K  Y  G  A  N  C  C  L  I  S  N  P  H  V  S  K  L  N  P  T  C  Q  A  P  I  A  K  I  I  Q  D  I  I  Q  F  N  S  C  C  T  S  V  E  E  I  N  V  E  A  L  V  P  C  R  S  C  N  I  K  V  E  Q   </first_frame>
            <second_frame>  F  F  F  F  F  F  L  K  F  F  F  F  F  S  F   : F  R  I  *  A  S  S  D  H  *  K  N  P  L  V  L  F  F  Q  V  H  S  H  V  L  Q  T  H  R  T  C  Q  G  S  S  L  F  R  T  P  T  P  Q  R  I  *  S  L  T  N  G  R  T  N  Q  T  I  N  S  K  N  N  V  *  L  I  Y  S  *  N  M  V  Q  T  A  V  *  S  A  I  P  M  Y  Q  S  *  I  Q  L  V  K  L  Q  L  P  K  S  S  K  T  L  F  N  S  I  H  V  A  L  V  L  K  R  S  M  L  K  H  W  F  L  A  G  L  A  I  L  K  L  S  K  </second_frame>
            <third_frame>   F  F  F  F  F  F  *  N  F  F  F  F  F  L  F  :  L  G  F  K  H  H  L  I  T  R  K  I  P  L  C  C  S  S  K  Y  T  L  M  S  Y  K  L  T  V  H  V  K  G  Q  A  S  S  V  P  Q  P  L  K  E  S  S  L  *  Q  M  V  G  Q  T  K  L  *  I  P  K  I  M  Y  N  S  S  T  P  K  I  W  C  K  L  L  S  D  Q  Q  S  P  C  I  K  A  E  S  N  L  S  S  S  N  C  Q  N  H  P  R  H  Y  S  I  Q  F  M  L  H  *  C  *  R  D  Q  C  *  S  T  G  S  L  P  V  L  Q  Y  *  S  *  A  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="14297" stop="14503"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CITHLLLKYGANCCLISNPHVSKLNPTCQAPIAKIIQDIIQFNSCCTSVEEINVEALVPCRSCNIKVEQ</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="19884" PGL_stop="14090"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="19867" e_stop="19666"/>
            <exon e_start="18066" e_stop="17848"/>
            <exon e_start="16987" e_stop="16841"/>
            <exon e_start="16408" e_stop="16250"/>
            <exon e_start="15957" e_stop="15762"/>
            <exon e_start="15318" e_stop="14728"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.094" e_score="0.896"/>
          <exon-intron don_prob="0.997" acc_prob="0.870" e_score="0.950"/>
          <exon-intron don_prob="0.898" acc_prob="0.862" e_score="0.932"/>
          <exon-intron don_prob="0.998" acc_prob="0.986" e_score="0.934"/>
          <exon-intron don_prob="0.999" acc_prob="0.904" e_score="1.000"/>
          <exon-only e_score="0.968"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.896">
            <gDNA_exon_boundary e_start="19867" e_stop="19666" e_length="202"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.094">
            <gDNA_intron_boundary i_start="19665" i_stop="18067" i_length="1599"/>
          </intron>
          <exon e_serial="2" e_score="0.950">
            <gDNA_exon_boundary e_start="18066" e_stop="17848" e_length="219"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.870">
            <gDNA_intron_boundary i_start="17847" i_stop="16988" i_length="860"/>
          </intron>
          <exon e_serial="3" e_score="0.932">
            <gDNA_exon_boundary e_start="16987" e_stop="16841" e_length="147"/>
          </exon>
          <intron i_serial="3" don_prob="0.898" acc_prob="0.862">
            <gDNA_intron_boundary i_start="16840" i_stop="16409" i_length="432"/>
          </intron>
          <exon e_serial="4" e_score="0.934">
            <gDNA_exon_boundary e_start="16408" e_stop="16250" e_length="159"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.986">
            <gDNA_intron_boundary i_start="16249" i_stop="15958" i_length="292"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="15957" e_stop="15762" e_length="196"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.904">
            <gDNA_intron_boundary i_start="15761" i_stop="15319" i_length="443"/>
          </intron>
          <exon e_serial="6" e_score="0.968">
            <gDNA_exon_boundary e_start="15318" e_stop="14728" e_length="591"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19867" stop="19666"/>
              <exon start="18066" stop="17848"/>
              <exon start="16987" stop="16850"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E423956" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19850" stop="19666"/>
              <exon start="18066" stop="17848"/>
              <exon start="16987" stop="16841"/>
              <exon start="16408" stop="16258"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E406940" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19850" stop="19666"/>
              <exon start="18066" stop="17848"/>
              <exon start="16987" stop="16841"/>
              <exon start="16408" stop="16333"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E420924" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16259" stop="16250"/>
              <exon start="15957" stop="15762"/>
              <exon start="15318" stop="15050"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208475" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15853" stop="15762"/>
              <exon start="15318" stop="14764"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E431812" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15853" stop="15762"/>
              <exon start="15318" stop="14813"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465105" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15806" stop="15762"/>
              <exon start="15318" stop="14728"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E455293" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTGGCTCTTCCTTCTTCTCCAGCTATCTTCTTCACCTTCAAACTTAGTATTCTGAGTTAATTTTTTCTTCTAAACTTCAATTTTGCATCATTATTGCATAAAATTTTCGAAACTGAATTCAATTTTTTTGTTATTTGCTAAAGAAATTATCGTTTCTGATCAAATAGGAGGATTCGGAGGTTAGATTTCAGGCGTTTTCAG : ATTCTAAACTGAAGTGAACAGAACATCCATTATGCTGGAATGACTTCAAGTACATAAGATCCTATGCATTGAGGATGAAGGGAGGTTTAAAGGTTCCACTGATCTCTCTCATCCTTATTGGATTTGTCTGCGCCAGTATTATTATTTTGGCATACGTGAAAAGCCCTTTTCTCTCTTATTGGACATCATCTCAAGACCGTGTCTTCCAGATTTCTCCAG : ATTATAAAGTGAAAGATGAAGAAGTTTTAAAAGAAAGAAATAGATCAGGGCAATCAGAAGAAAATGTGAACTTTGAATCTGCCATTTCACACTCTTCAATGAAGGATAAGGTGACTGAAGAACCAATTACTAATACTGAGATCGAAG : GAAGTGTAGGTATTCCTCTCAACTTTACCCAAAAAGGAGGAGATTTAAAAGCCTTGGGAGAAAAAAATAGTTCAAGAGAACAGGAAAATGAAGTCGCTGCTCCACTGGATTCTGCAGGCGTCGCTATAGAAAATATGACATCTGATTCAAAAGATCATG : GTTGTAATTATGCTAAAGGTAGATGGGTCACAGATGATAGTCGGCCTTTATATTCTGGATTTCGCTGCAAGCGGTGGTTGTCAGCCATGTGGGCTTGCCGCTTGACACAGCGTACGGATTTTGAATACGAGAAACTACGTTGGAGACCAAGGGATTGCGAGATCGAAGAGTTTACAGGTGTTAAATTCCTGAAAAG : GATGGAGAACAAAACTCTGGCCTTCATTGGGGATTCCCTTGGCAGACAACAATTCCAGTCGCTTATGTGTATGATTACTGGTGGTGAAGACAGACCTGATGTTCTTGACGTGGGACGTGAATATGGTCTTGTAAAGGCTCGTCATGCTGTACGACCTGATGGATGGGCTTATCGATTTCCAAGGACCCAAACAACTATTCTTTACTATTGGTCTGCTAGTTTGTGTAACTTGACACCCATTAATGCCTCTAACCCTCTTACTGATTATGCCATGCACCTGGATCGTCCACCTGCATTTTTAAGTCGTTTCCTACCCAGATTTGATGTCCTTGTTCTTAACACAGGACACCATTGGAATAGAGGCAAGCTTAACGCCAACCGATGGGTCATGTATGTGGATGGTGTTCCTAACACGAACAGGAAAATAGCAGATATTAATGGTGCCAAGAATCTTACAATTCACAGTATCATTAAATGGGTAGATTCACAGCTGCCAAAATACCCTGGTCTTAAAGCATTTTACCGGTCTATATCGCCCAGACATTTTTTTAATGGAGATTGGAACACTGGAGGCACCTGTGATAACACCAC</gDNA_template>
            <first_frame> I  G  S  S  F  F  S  S  Y  L  L  H  L  Q  T  *  Y  S  E  L  I  F  S  S  K  L  Q  F  C  I  I  I  A  *  N  F  R  N  *  I  Q  F  F  C  Y  L  L  K  K  L  S  F  L  I  K  *  E  D  S  E  V  R  F  Q  A  F  S   : D  S  K  L  K  *  T  E  H  P  L  C  W  N  D  F  K  Y  I  R  S  Y  A  L  R  M  K  G  G  L  K  V  P  L  I  S  L  I  L  I  G  F  V  C  A  S  I  I  I  L  A  Y  V  K  S  P  F  L  S  Y  W  T  S  S  Q  D  R  V  F  Q  I  S  P   : D  Y  K  V  K  D  E  E  V  L  K  E  R  N  R  S  G  Q  S  E  E  N  V  N  F  E  S  A  I  S  H  S  S  M  K  D  K  V  T  E  E  P  I  T  N  T  E  I  E   : G  S  V  G  I  P  L  N  F  T  Q  K  G  G  D  L  K  A  L  G  E  K  N  S  S  R  E  Q  E  N  E  V  A  A  P  L  D  S  A  G  V  A  I  E  N  M  T  S  D  S  K  D  H   : G  C  N  Y  A  K  G  R  W  V  T  D  D  S  R  P  L  Y  S  G  F  R  C  K  R  W  L  S  A  M  W  A  C  R  L  T  Q  R  T  D  F  E  Y  E  K  L  R  W  R  P  R  D  C  E  I  E  E  F  T  G  V  K  F  L  K  R :   M  E  N  K  T  L  A  F  I  G  D  S  L  G  R  Q  Q  F  Q  S  L  M  C  M  I  T  G  G  E  D  R  P  D  V  L  D  V  G  R  E  Y  G  L  V  K  A  R  H  A  V  R  P  D  G  W  A  Y  R  F  P  R  T  Q  T  T  I  L  Y  Y  W  S  A  S  L  C  N  L  T  P  I  N  A  S  N  P  L  T  D  Y  A  M  H  L  D  R  P  P  A  F  L  S  R  F  L  P  R  F  D  V  L  V  L  N  T  G  H  H  W  N  R  G  K  L  N  A  N  R  W  V  M  Y  V  D  G  V  P  N  T  N  R  K  I  A  D  I  N  G  A  K  N  L  T  I  H  S  I  I  K  W  V  D  S  Q  L  P  K  Y  P  G  L  K  A  F  Y  R  S  I  S  P  R  H  F  F  N  G  D  W  N  T  G  G  T  C  D  N  T   </first_frame>
            <second_frame>  L  A  L  P  S  S  P  A  I  F  F  T  F  K  L  S  I  L  S  *  F  F  L  L  N  F  N  F  A  S  L  L  H  K  I  F  E  T  E  F  N  F  F  V  I  C  *  R  N  Y  R  F  *  S  N  R  R  I  R  R  L  D  F  R  R  F  Q  :  I  L  N  *  S  E  Q  N  I  H  Y  A  G  M  T  S  S  T  *  D  P  M  H  *  G  *  R  E  V  *  R  F  H  *  S  L  S  S  L  L  D  L  S  A  P  V  L  L  F  W  H  T  *  K  A  L  F  S  L  I  G  H  H  L  K  T  V  S  S  R  F  L  Q  :  I  I  K  *  K  M  K  K  F  *  K  K  E  I  D  Q  G  N  Q  K  K  M  *  T  L  N  L  P  F  H  T  L  Q  *  R  I  R  *  L  K  N  Q  L  L  I  L  R  S  K  :  E  V  *  V  F  L  S  T  L  P  K  K  E  E  I  *  K  P  W  E  K  K  I  V  Q  E  N  R  K  M  K  S  L  L  H  W  I  L  Q  A  S  L  *  K  I  *  H  L  I  Q  K  I  M  :  V  V  I  M  L  K  V  D  G  S  Q  M  I  V  G  L  Y  I  L  D  F  A  A  S  G  G  C  Q  P  C  G  L  A  A  *  H  S  V  R  I  L  N  T  R  N  Y  V  G  D  Q  G  I  A  R  S  K  S  L  Q  V  L  N  S  *  K   : G  W  R  T  K  L  W  P  S  L  G  I  P  L  A  D  N  N  S  S  R  L  C  V  *  L  L  V  V  K  T  D  L  M  F  L  T  W  D  V  N  M  V  L  *  R  L  V  M  L  Y  D  L  M  D  G  L  I  D  F  Q  G  P  K  Q  L  F  F  T  I  G  L  L  V  C  V  T  *  H  P  L  M  P  L  T  L  L  L  I  M  P  C  T  W  I  V  H  L  H  F  *  V  V  S  Y  P  D  L  M  S  L  F  L  T  Q  D  T  I  G  I  E  A  S  L  T  P  T  D  G  S  C  M  W  M  V  F  L  T  R  T  G  K  *  Q  I  L  M  V  P  R  I  L  Q  F  T  V  S  L  N  G  *  I  H  S  C  Q  N  T  L  V  L  K  H  F  T  G  L  Y  R  P  D  I  F  L  M  E  I  G  T  L  E  A  P  V  I  T  P  </second_frame>
            <third_frame>   W  L  F  L  L  L  Q  L  S  S  S  P  S  N  L  V  F  *  V  N  F  F  F  *  T  S  I  L  H  H  Y  C  I  K  F  S  K  L  N  S  I  F  L  L  F  A  K  E  I  I  V  S  D  Q  I  G  G  F  G  G  *  I  S  G  V  F  R :   F  *  T  E  V  N  R  T  S  I  M  L  E  *  L  Q  V  H  K  I  L  C  I  E  D  E  G  R  F  K  G  S  T  D  L  S  H  P  Y  W  I  C  L  R  Q  Y  Y  Y  F  G  I  R  E  K  P  F  S  L  L  L  D  I  I  S  R  P  C  L  P  D  F  S  R :   L  *  S  E  R  *  R  S  F  K  R  K  K  *  I  R  A  I  R  R  K  C  E  L  *  I  C  H  F  T  L  F  N  E  G  *  G  D  *  R  T  N  Y  *  Y  *  D  R  R :   K  C  R  Y  S  S  Q  L  Y  P  K  R  R  R  F  K  S  L  G  R  K  K  *  F  K  R  T  G  K  *  S  R  C  S  T  G  F  C  R  R  R  Y  R  K  Y  D  I  *  F  K  R  S  W :   L  *  L  C  *  R  *  M  G  H  R  *  *  S  A  F  I  F  W  I  S  L  Q  A  V  V  V  S  H  V  G  L  P  L  D  T  A  Y  G  F  *  I  R  E  T  T  L  E  T  K  G  L  R  D  R  R  V  Y  R  C  *  I  P  E  K  :  D  G  E  Q  N  S  G  L  H  W  G  F  P  W  Q  T  T  I  P  V  A  Y  V  Y  D  Y  W  W  *  R  Q  T  *  C  S  *  R  G  T  *  I  W  S  C  K  G  S  S  C  C  T  T  *  W  M  G  L  S  I  S  K  D  P  N  N  Y  S  L  L  L  V  C  *  F  V  *  L  D  T  H  *  C  L  *  P  S  Y  *  L  C  H  A  P  G  S  S  T  C  I  F  K  S  F  P  T  Q  I  *  C  P  C  S  *  H  R  T  P  L  E  *  R  Q  A  *  R  Q  P  M  G  H  V  C  G  W  C  S  *  H  E  Q  E  N  S  R  Y  *  W  C  Q  E  S  Y  N  S  Q  Y  H  *  M  G  R  F  T  A  A  K  I  P  W  S  *  S  I  L  P  V  Y  I  A  Q  T  F  F  *  W  R  L  E  H  W  R  H  L  *  *  H  H </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18049" stop="17848"/>
                    <exon start="16987" stop="16841"/>
                    <exon start="16408" stop="16250"/>
                    <exon start="15957" stop="15762"/>
                    <exon start="15318" stop="14730"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1293</number_coding_nucleotides>
                  <number_encoded_amino_acids>431</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TEHPLCWNDFKYIRSYALRMKGGLKVPLISLILIGFVCASIIILAYVKSPFLSYWTSSQDRVFQISPDYKVKDEEVLKERNRSGQSEENVNFESAISHSSMKDKVTEEPITNTEIEGSVGIPLNFTQKGGDLKALGEKNSSREQENEVAAPLDSAGVAIENMTSDSKDHGCNYAKGRWVTDDSRPLYSGFRCKRWLSAMWACRLTQRTDFEYEKLRWRPRDCEIEEFTGVKFLKRMENKTLAFIGDSLGRQQFQSLMCMITGGEDRPDVLDVGREYGLVKARHAVRPDGWAYRFPRTQTTILYYWSASLCNLTPINASNPLTDYAMHLDRPPAFLSRFLPRFDVLVLNTGHHWNRGKLNANRWVMYVDGVPNTNRKIADINGAKNLTIHSIIKWVDSQLPKYPGLKAFYRSISPRHFFNGDWNTGGTCDNT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="19884" e_stop="19666"/>
            <exon e_start="18075" e_stop="17848"/>
            <exon e_start="16987" e_stop="16841"/>
            <exon e_start="16408" e_stop="16250"/>
            <exon e_start="15957" e_stop="15762"/>
            <exon e_start="15318" e_stop="14728"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.058" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.870" e_score="1.000"/>
          <exon-intron don_prob="0.898" acc_prob="0.862" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.986" e_score="0.987"/>
          <exon-intron don_prob="0.999" acc_prob="0.904" e_score="1.000"/>
          <exon-only e_score="0.968"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="19884" e_stop="19666" e_length="219"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.058">
            <gDNA_intron_boundary i_start="19665" i_stop="18076" i_length="1590"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="18075" e_stop="17848" e_length="228"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.870">
            <gDNA_intron_boundary i_start="17847" i_stop="16988" i_length="860"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="16987" e_stop="16841" e_length="147"/>
          </exon>
          <intron i_serial="3" don_prob="0.898" acc_prob="0.862">
            <gDNA_intron_boundary i_start="16840" i_stop="16409" i_length="432"/>
          </intron>
          <exon e_serial="4" e_score="0.987">
            <gDNA_exon_boundary e_start="16408" e_stop="16250" e_length="159"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.986">
            <gDNA_intron_boundary i_start="16249" i_stop="15958" i_length="292"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="15957" e_stop="15762" e_length="196"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.904">
            <gDNA_intron_boundary i_start="15761" i_stop="15319" i_length="443"/>
          </intron>
          <exon e_serial="6" e_score="0.968">
            <gDNA_exon_boundary e_start="15318" e_stop="14728" e_length="591"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19884" stop="19666"/>
              <exon start="18075" stop="17848"/>
              <exon start="16987" stop="16841"/>
              <exon start="16408" stop="16250"/>
              <exon start="15957" stop="15948"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E543312" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19883" stop="19666"/>
              <exon start="18075" stop="17848"/>
              <exon start="16987" stop="16894"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303185" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19845" stop="19666"/>
              <exon start="18075" stop="17950"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307267" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16259" stop="16250"/>
              <exon start="15957" stop="15762"/>
              <exon start="15318" stop="15050"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208475" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15853" stop="15762"/>
              <exon start="15318" stop="14764"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E431812" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15853" stop="15762"/>
              <exon start="15318" stop="14813"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465105" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15806" stop="15762"/>
              <exon start="15318" stop="14728"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E455293" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTCCTCTCTGTTTCTCCATTGGCTCTTCCTTCTTCTCCAGCTATCTTCTTCACCTTCAAACTTAGTATTCTGAGTTAATTTTTTCTTCTAAACTTCAATTTTGCATCATTATTGCATAAAATTTTCGAAACTGAATTCAATTTTTTTGTTATTTGCTAAAGAAATTATCGTTTCTGATCAAATAGGAGGATTCGGAGGTTAGATTTCAGGCGTTTTCAG : CTATTTCAGATTCTAAACTGAAGTGAACAGAACATCCATTATGCTGGAATGACTTCAAGTACATAAGATCCTATGCATTGAGGATGAAGGGAGGTTTAAAGGTTCCACTGATCTCTCTCATCCTTATTGGATTTGTCTGCGCCAGTATTATTATTTTGGCATACGTGAAAAGCCCTTTTCTCTCTTATTGGACATCATCTCAAGACCGTGTCTTCCAGATTTCTCCAG : ATTATAAAGTGAAAGATGAAGAAGTTTTAAAAGAAAGAAATAGATCAGGGCAATCAGAAGAAAATGTGAACTTTGAATCTGCCATTTCACACTCTTCAATGAAGGATAAGGTGACTGAAGAACCAATTACTAATACTGAGATCGAAG : GAAGTGTAGGTATTCCTCTCAACTTTACCCAAAAAGGAGGAGATTTAAAAGCCTTGGGAGAAAAAAATAGTTCAAGAGAACAGGAAAATGAAGTCGCTGCTCCACTGGATTCTGCAGGCGTCGCTATAGAAAATATGACATCTGATTCAAAAGATCATG : GTTGTAATTATGCTAAAGGTAGATGGGTCACAGATGATAGTCGGCCTTTATATTCTGGATTTCGCTGCAAGCGGTGGTTGTCAGCCATGTGGGCTTGCCGCTTGACACAGCGTACGGATTTTGAATACGAGAAACTACGTTGGAGACCAAGGGATTGCGAGATCGAAGAGTTTACAGGTGTTAAATTCCTGAAAAG : GATGGAGAACAAAACTCTGGCCTTCATTGGGGATTCCCTTGGCAGACAACAATTCCAGTCGCTTATGTGTATGATTACTGGTGGTGAAGACAGACCTGATGTTCTTGACGTGGGACGTGAATATGGTCTTGTAAAGGCTCGTCATGCTGTACGACCTGATGGATGGGCTTATCGATTTCCAAGGACCCAAACAACTATTCTTTACTATTGGTCTGCTAGTTTGTGTAACTTGACACCCATTAATGCCTCTAACCCTCTTACTGATTATGCCATGCACCTGGATCGTCCACCTGCATTTTTAAGTCGTTTCCTACCCAGATTTGATGTCCTTGTTCTTAACACAGGACACCATTGGAATAGAGGCAAGCTTAACGCCAACCGATGGGTCATGTATGTGGATGGTGTTCCTAACACGAACAGGAAAATAGCAGATATTAATGGTGCCAAGAATCTTACAATTCACAGTATCATTAAATGGGTAGATTCACAGCTGCCAAAATACCCTGGTCTTAAAGCATTTTACCGGTCTATATCGCCCAGACATTTTTTTAATGGAGATTGGAACACTGGAGGCACCTGTGATAACACCAC</gDNA_template>
            <first_frame> L  L  S  V  S  P  L  A  L  P  S  S  P  A  I  F  F  T  F  K  L  S  I  L  S  *  F  F  L  L  N  F  N  F  A  S  L  L  H  K  I  F  E  T  E  F  N  F  F  V  I  C  *  R  N  Y  R  F  *  S  N  R  R  I  R  R  L  D  F  R  R  F  Q  :  L  F  Q  I  L  N  *  S  E  Q  N  I  H  Y  A  G  M  T  S  S  T  *  D  P  M  H  *  G  *  R  E  V  *  R  F  H  *  S  L  S  S  L  L  D  L  S  A  P  V  L  L  F  W  H  T  *  K  A  L  F  S  L  I  G  H  H  L  K  T  V  S  S  R  F  L  Q  :  I  I  K  *  K  M  K  K  F  *  K  K  E  I  D  Q  G  N  Q  K  K  M  *  T  L  N  L  P  F  H  T  L  Q  *  R  I  R  *  L  K  N  Q  L  L  I  L  R  S  K  :  E  V  *  V  F  L  S  T  L  P  K  K  E  E  I  *  K  P  W  E  K  K  I  V  Q  E  N  R  K  M  K  S  L  L  H  W  I  L  Q  A  S  L  *  K  I  *  H  L  I  Q  K  I  M  :  V  V  I  M  L  K  V  D  G  S  Q  M  I  V  G  L  Y  I  L  D  F  A  A  S  G  G  C  Q  P  C  G  L  A  A  *  H  S  V  R  I  L  N  T  R  N  Y  V  G  D  Q  G  I  A  R  S  K  S  L  Q  V  L  N  S  *  K   : G  W  R  T  K  L  W  P  S  L  G  I  P  L  A  D  N  N  S  S  R  L  C  V  *  L  L  V  V  K  T  D  L  M  F  L  T  W  D  V  N  M  V  L  *  R  L  V  M  L  Y  D  L  M  D  G  L  I  D  F  Q  G  P  K  Q  L  F  F  T  I  G  L  L  V  C  V  T  *  H  P  L  M  P  L  T  L  L  L  I  M  P  C  T  W  I  V  H  L  H  F  *  V  V  S  Y  P  D  L  M  S  L  F  L  T  Q  D  T  I  G  I  E  A  S  L  T  P  T  D  G  S  C  M  W  M  V  F  L  T  R  T  G  K  *  Q  I  L  M  V  P  R  I  L  Q  F  T  V  S  L  N  G  *  I  H  S  C  Q  N  T  L  V  L  K  H  F  T  G  L  Y  R  P  D  I  F  L  M  E  I  G  T  L  E  A  P  V  I  T  P  </first_frame>
            <second_frame>  S  S  L  F  L  H  W  L  F  L  L  L  Q  L  S  S  S  P  S  N  L  V  F  *  V  N  F  F  F  *  T  S  I  L  H  H  Y  C  I  K  F  S  K  L  N  S  I  F  L  L  F  A  K  E  I  I  V  S  D  Q  I  G  G  F  G  G  *  I  S  G  V  F  S :   Y  F  R  F  *  T  E  V  N  R  T  S  I  M  L  E  *  L  Q  V  H  K  I  L  C  I  E  D  E  G  R  F  K  G  S  T  D  L  S  H  P  Y  W  I  C  L  R  Q  Y  Y  Y  F  G  I  R  E  K  P  F  S  L  L  L  D  I  I  S  R  P  C  L  P  D  F  S  R :   L  *  S  E  R  *  R  S  F  K  R  K  K  *  I  R  A  I  R  R  K  C  E  L  *  I  C  H  F  T  L  F  N  E  G  *  G  D  *  R  T  N  Y  *  Y  *  D  R  R :   K  C  R  Y  S  S  Q  L  Y  P  K  R  R  R  F  K  S  L  G  R  K  K  *  F  K  R  T  G  K  *  S  R  C  S  T  G  F  C  R  R  R  Y  R  K  Y  D  I  *  F  K  R  S  W :   L  *  L  C  *  R  *  M  G  H  R  *  *  S  A  F  I  F  W  I  S  L  Q  A  V  V  V  S  H  V  G  L  P  L  D  T  A  Y  G  F  *  I  R  E  T  T  L  E  T  K  G  L  R  D  R  R  V  Y  R  C  *  I  P  E  K  :  D  G  E  Q  N  S  G  L  H  W  G  F  P  W  Q  T  T  I  P  V  A  Y  V  Y  D  Y  W  W  *  R  Q  T  *  C  S  *  R  G  T  *  I  W  S  C  K  G  S  S  C  C  T  T  *  W  M  G  L  S  I  S  K  D  P  N  N  Y  S  L  L  L  V  C  *  F  V  *  L  D  T  H  *  C  L  *  P  S  Y  *  L  C  H  A  P  G  S  S  T  C  I  F  K  S  F  P  T  Q  I  *  C  P  C  S  *  H  R  T  P  L  E  *  R  Q  A  *  R  Q  P  M  G  H  V  C  G  W  C  S  *  H  E  Q  E  N  S  R  Y  *  W  C  Q  E  S  Y  N  S  Q  Y  H  *  M  G  R  F  T  A  A  K  I  P  W  S  *  S  I  L  P  V  Y  I  A  Q  T  F  F  *  W  R  L  E  H  W  R  H  L  *  *  H  H </second_frame>
            <third_frame>   P  L  C  F  S  I  G  S  S  F  F  S  S  Y  L  L  H  L  Q  T  *  Y  S  E  L  I  F  S  S  K  L  Q  F  C  I  I  I  A  *  N  F  R  N  *  I  Q  F  F  C  Y  L  L  K  K  L  S  F  L  I  K  *  E  D  S  E  V  R  F  Q  A  F  S   : A  I  S  D  S  K  L  K  *  T  E  H  P  L  C  W  N  D  F  K  Y  I  R  S  Y  A  L  R  M  K  G  G  L  K  V  P  L  I  S  L  I  L  I  G  F  V  C  A  S  I  I  I  L  A  Y  V  K  S  P  F  L  S  Y  W  T  S  S  Q  D  R  V  F  Q  I  S  P   : D  Y  K  V  K  D  E  E  V  L  K  E  R  N  R  S  G  Q  S  E  E  N  V  N  F  E  S  A  I  S  H  S  S  M  K  D  K  V  T  E  E  P  I  T  N  T  E  I  E   : G  S  V  G  I  P  L  N  F  T  Q  K  G  G  D  L  K  A  L  G  E  K  N  S  S  R  E  Q  E  N  E  V  A  A  P  L  D  S  A  G  V  A  I  E  N  M  T  S  D  S  K  D  H   : G  C  N  Y  A  K  G  R  W  V  T  D  D  S  R  P  L  Y  S  G  F  R  C  K  R  W  L  S  A  M  W  A  C  R  L  T  Q  R  T  D  F  E  Y  E  K  L  R  W  R  P  R  D  C  E  I  E  E  F  T  G  V  K  F  L  K  R :   M  E  N  K  T  L  A  F  I  G  D  S  L  G  R  Q  Q  F  Q  S  L  M  C  M  I  T  G  G  E  D  R  P  D  V  L  D  V  G  R  E  Y  G  L  V  K  A  R  H  A  V  R  P  D  G  W  A  Y  R  F  P  R  T  Q  T  T  I  L  Y  Y  W  S  A  S  L  C  N  L  T  P  I  N  A  S  N  P  L  T  D  Y  A  M  H  L  D  R  P  P  A  F  L  S  R  F  L  P  R  F  D  V  L  V  L  N  T  G  H  H  W  N  R  G  K  L  N  A  N  R  W  V  M  Y  V  D  G  V  P  N  T  N  R  K  I  A  D  I  N  G  A  K  N  L  T  I  H  S  I  I  K  W  V  D  S  Q  L  P  K  Y  P  G  L  K  A  F  Y  R  S  I  S  P  R  H  F  F  N  G  D  W  N  T  G  G  T  C  D  N  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18049" stop="17848"/>
                    <exon start="16987" stop="16841"/>
                    <exon start="16408" stop="16250"/>
                    <exon start="15957" stop="15762"/>
                    <exon start="15318" stop="14730"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1293</number_coding_nucleotides>
                  <number_encoded_amino_acids>431</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TEHPLCWNDFKYIRSYALRMKGGLKVPLISLILIGFVCASIIILAYVKSPFLSYWTSSQDRVFQISPDYKVKDEEVLKERNRSGQSEENVNFESAISHSSMKDKVTEEPITNTEIEGSVGIPLNFTQKGGDLKALGEKNSSREQENEVAAPLDSAGVAIENMTSDSKDHGCNYAKGRWVTDDSRPLYSGFRCKRWLSAMWACRLTQRTDFEYEKLRWRPRDCEIEEFTGVKFLKRMENKTLAFIGDSLGRQQFQSLMCMITGGEDRPDVLDVGREYGLVKARHAVRPDGWAYRFPRTQTTILYYWSASLCNLTPINASNPLTDYAMHLDRPPAFLSRFLPRFDVLVLNTGHHWNRGKLNANRWVMYVDGVPNTNRKIADINGAKNLTIHSIIKWVDSQLPKYPGLKAFYRSISPRHFFNGDWNTGGTCDNT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="19866" e_stop="19666"/>
            <exon e_start="18075" e_stop="17848"/>
            <exon e_start="16990" e_stop="16850"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.058" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.286" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="19866" e_stop="19666" e_length="201"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.058">
            <gDNA_intron_boundary i_start="19665" i_stop="18076" i_length="1590"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="18075" e_stop="17848" e_length="228"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.286">
            <gDNA_intron_boundary i_start="17847" i_stop="16991" i_length="857"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="16990" e_stop="16850" e_length="141"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19866" stop="19666"/>
              <exon start="18075" stop="17848"/>
              <exon start="16990" stop="16895"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307266" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19845" stop="19666"/>
              <exon start="18075" stop="17950"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307267" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19827" stop="19666"/>
              <exon start="18075" stop="17848"/>
              <exon start="16990" stop="16850"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E300092" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTGGCTCTTCCTTCTTCTCCAGCTATCTTCTTCACCTTCAAACTTAGTATTCTGAGTTAATTTTTTCTTCTAAACTTCAATTTTGCATCATTATTGCATAAAATTTTCGAAACTGAATTCAATTTTTTTGTTATTTGCTAAAGAAATTATCGTTTCTGATCAAATAGGAGGATTCGGAGGTTAGATTTCAGGCGTTTTCAG : CTATTTCAGATTCTAAACTGAAGTGAACAGAACATCCATTATGCTGGAATGACTTCAAGTACATAAGATCCTATGCATTGAGGATGAAGGGAGGTTTAAAGGTTCCACTGATCTCTCTCATCCTTATTGGATTTGTCTGCGCCAGTATTATTATTTTGGCATACGTGAAAAGCCCTTTTCTCTCTTATTGGACATCATCTCAAGACCGTGTCTTCCAGATTTCTCCAG : CAGATTATAAAGTGAAAGATGAAGAAGTTTTAAAAGAAAGAAATAGATCAGGGCAATCAGAAGAAAATGTGAACTTTGAATCTGCCATTTCACACTCTTCAATGAAGGATAAGGTGACTGAAGAACCAATTACTAATACTG</gDNA_template>
            <first_frame> L  A  L  P  S  S  P  A  I  F  F  T  F  K  L  S  I  L  S  *  F  F  L  L  N  F  N  F  A  S  L  L  H  K  I  F  E  T  E  F  N  F  F  V  I  C  *  R  N  Y  R  F  *  S  N  R  R  I  R  R  L  D  F  R  R  F  Q  :  L  F  Q  I  L  N  *  S  E  Q  N  I  H  Y  A  G  M  T  S  S  T  *  D  P  M  H  *  G  *  R  E  V  *  R  F  H  *  S  L  S  S  L  L  D  L  S  A  P  V  L  L  F  W  H  T  *  K  A  L  F  S  L  I  G  H  H  L  K  T  V  S  S  R  F  L  Q  :  Q  I  I  K  *  K  M  K  K  F  *  K  K  E  I  D  Q  G  N  Q  K  K  M  *  T  L  N  L  P  F  H  T  L  Q  *  R  I  R  *  L  K  N  Q  L  L  I  L </first_frame>
            <second_frame>  W  L  F  L  L  L  Q  L  S  S  S  P  S  N  L  V  F  *  V  N  F  F  F  *  T  S  I  L  H  H  Y  C  I  K  F  S  K  L  N  S  I  F  L  L  F  A  K  E  I  I  V  S  D  Q  I  G  G  F  G  G  *  I  S  G  V  F  S :   Y  F  R  F  *  T  E  V  N  R  T  S  I  M  L  E  *  L  Q  V  H  K  I  L  C  I  E  D  E  G  R  F  K  G  S  T  D  L  S  H  P  Y  W  I  C  L  R  Q  Y  Y  Y  F  G  I  R  E  K  P  F  S  L  L  L  D  I  I  S  R  P  C  L  P  D  F  S  S :   R  L  *  S  E  R  *  R  S  F  K  R  K  K  *  I  R  A  I  R  R  K  C  E  L  *  I  C  H  F  T  L  F  N  E  G  *  G  D  *  R  T  N  Y  *  Y   </second_frame>
            <third_frame>   G  S  S  F  F  S  S  Y  L  L  H  L  Q  T  *  Y  S  E  L  I  F  S  S  K  L  Q  F  C  I  I  I  A  *  N  F  R  N  *  I  Q  F  F  C  Y  L  L  K  K  L  S  F  L  I  K  *  E  D  S  E  V  R  F  Q  A  F  S   : A  I  S  D  S  K  L  K  *  T  E  H  P  L  C  W  N  D  F  K  Y  I  R  S  Y  A  L  R  M  K  G  G  L  K  V  P  L  I  S  L  I  L  I  G  F  V  C  A  S  I  I  I  L  A  Y  V  K  S  P  F  L  S  Y  W  T  S  S  Q  D  R  V  F  Q  I  S  P   : A  D  Y  K  V  K  D  E  E  V  L  K  E  R  N  R  S  G  Q  S  E  E  N  V  N  F  E  S  A  I  S  H  S  S  M  K  D  K  V  T  E  E  P  I  T  N  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18049" stop="17848"/>
                    <exon start="16990" stop="16851"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>342</number_coding_nucleotides>
                  <number_encoded_amino_acids>114</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TEHPLCWNDFKYIRSYALRMKGGLKVPLISLILIGFVCASIIILAYVKSPFLSYWTSSQDRVFQISPADYKVKDEEVLKERNRSGQSEENVNFESAISHSSMKDKVTEEPITNT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="19867" e_stop="19666"/>
            <exon e_start="18066" e_stop="17848"/>
            <exon e_start="16987" e_stop="16841"/>
            <exon e_start="16408" e_stop="16400"/>
            <exon e_start="14365" e_stop="14280"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.094" e_score="0.896"/>
          <exon-intron don_prob="0.997" acc_prob="0.870" e_score="0.950"/>
          <exon-intron don_prob="0.898" acc_prob="0.862" e_score="0.932"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.889"/>
          <exon-only e_score="0.919"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.896">
            <gDNA_exon_boundary e_start="19867" e_stop="19666" e_length="202"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.094">
            <gDNA_intron_boundary i_start="19665" i_stop="18067" i_length="1599"/>
          </intron>
          <exon e_serial="2" e_score="0.950">
            <gDNA_exon_boundary e_start="18066" e_stop="17848" e_length="219"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.870">
            <gDNA_intron_boundary i_start="17847" i_stop="16988" i_length="860"/>
          </intron>
          <exon e_serial="3" e_score="0.932">
            <gDNA_exon_boundary e_start="16987" e_stop="16841" e_length="147"/>
          </exon>
          <intron i_serial="3" don_prob="0.898" acc_prob="0.862">
            <gDNA_intron_boundary i_start="16840" i_stop="16409" i_length="432"/>
          </intron>
          <exon e_serial="4" e_score="0.889">
            <gDNA_exon_boundary e_start="16408" e_stop="16400" e_length="9"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="16399" i_stop="14366" i_length="2034"/>
          </intron>
          <exon e_serial="5" e_score="0.919">
            <gDNA_exon_boundary e_start="14365" e_stop="14280" e_length="86"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19867" stop="19666"/>
              <exon start="18066" stop="17848"/>
              <exon start="16987" stop="16841"/>
              <exon start="16408" stop="16400"/>
              <exon start="14365" stop="14280"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E451410" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19867" stop="19666"/>
              <exon start="18066" stop="17848"/>
              <exon start="16987" stop="16850"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E423956" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTGGCTCTTCCTTCTTCTCCAGCTATCTTCTTCACCTTCAAACTTAGTATTCTGAGTTAATTTTTTCTTCTAAACTTCAATTTTGCATCATTATTGCATAAAATTTTCGAAACTGAATTCAATTTTTTTGTTATTTGCTAAAGAAATTATCGTTTCTGATCAAATAGGAGGATTCGGAGGTTAGATTTCAGGCGTTTTCAG : ATTCTAAACTGAAGTGAACAGAACATCCATTATGCTGGAATGACTTCAAGTACATAAGATCCTATGCATTGAGGATGAAGGGAGGTTTAAAGGTTCCACTGATCTCTCTCATCCTTATTGGATTTGTCTGCGCCAGTATTATTATTTTGGCATACGTGAAAAGCCCTTTTCTCTCTTATTGGACATCATCTCAAGACCGTGTCTTCCAGATTTCTCCAG : ATTATAAAGTGAAAGATGAAGAAGTTTTAAAAGAAAGAAATAGATCAGGGCAATCAGAAGAAAATGTGAACTTTGAATCTGCCATTTCACACTCTTCAATGAAGGATAAGGTGACTGAAGAACCAATTACTAATACTGAGATCGAAG : GAAGTGTAG : CTTTGATACATGGGGATTGCTGATCAGACAGCAGTTTGCACCATATTTTAGGAGTAGATGAGTTATACATTATTTTTGGAATTTAT</gDNA_template>
            <first_frame> I  G  S  S  F  F  S  S  Y  L  L  H  L  Q  T  *  Y  S  E  L  I  F  S  S  K  L  Q  F  C  I  I  I  A  *  N  F  R  N  *  I  Q  F  F  C  Y  L  L  K  K  L  S  F  L  I  K  *  E  D  S  E  V  R  F  Q  A  F  S   : D  S  K  L  K  *  T  E  H  P  L  C  W  N  D  F  K  Y  I  R  S  Y  A  L  R  M  K  G  G  L  K  V  P  L  I  S  L  I  L  I  G  F  V  C  A  S  I  I  I  L  A  Y  V  K  S  P  F  L  S  Y  W  T  S  S  Q  D  R  V  F  Q  I  S  P   : D  Y  K  V  K  D  E  E  V  L  K  E  R  N  R  S  G  Q  S  E  E  N  V  N  F  E  S  A  I  S  H  S  S  M  K  D  K  V  T  E  E  P  I  T  N  T  E  I  E   : G  S  V   : A  L  I  H  G  D  C  *  S  D  S  S  L  H  H  I  L  G  V  D  E  L  Y  I  I  F  G  I  Y </first_frame>
            <second_frame>  L  A  L  P  S  S  P  A  I  F  F  T  F  K  L  S  I  L  S  *  F  F  L  L  N  F  N  F  A  S  L  L  H  K  I  F  E  T  E  F  N  F  F  V  I  C  *  R  N  Y  R  F  *  S  N  R  R  I  R  R  L  D  F  R  R  F  Q  :  I  L  N  *  S  E  Q  N  I  H  Y  A  G  M  T  S  S  T  *  D  P  M  H  *  G  *  R  E  V  *  R  F  H  *  S  L  S  S  L  L  D  L  S  A  P  V  L  L  F  W  H  T  *  K  A  L  F  S  L  I  G  H  H  L  K  T  V  S  S  R  F  L  Q  :  I  I  K  *  K  M  K  K  F  *  K  K  E  I  D  Q  G  N  Q  K  K  M  *  T  L  N  L  P  F  H  T  L  Q  *  R  I  R  *  L  K  N  Q  L  L  I  L  R  S  K  :  E  V  *  :  L  *  Y  M  G  I  A  D  Q  T  A  V  C  T  I  F  *  E  *  M  S  Y  T  L  F  L  E  F   </second_frame>
            <third_frame>   W  L  F  L  L  L  Q  L  S  S  S  P  S  N  L  V  F  *  V  N  F  F  F  *  T  S  I  L  H  H  Y  C  I  K  F  S  K  L  N  S  I  F  L  L  F  A  K  E  I  I  V  S  D  Q  I  G  G  F  G  G  *  I  S  G  V  F  R :   F  *  T  E  V  N  R  T  S  I  M  L  E  *  L  Q  V  H  K  I  L  C  I  E  D  E  G  R  F  K  G  S  T  D  L  S  H  P  Y  W  I  C  L  R  Q  Y  Y  Y  F  G  I  R  E  K  P  F  S  L  L  L  D  I  I  S  R  P  C  L  P  D  F  S  R :   L  *  S  E  R  *  R  S  F  K  R  K  K  *  I  R  A  I  R  R  K  C  E  L  *  I  C  H  F  T  L  F  N  E  G  *  G  D  *  R  T  N  Y  *  Y  *  D  R  R :   K  C  S :   F  D  T  W  G  L  L  I  R  Q  Q  F  A  P  Y  F  R  S  R  *  V  I  H  Y  F  W  N  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18049" stop="17848"/>
                    <exon start="16987" stop="16841"/>
                    <exon start="16408" stop="16400"/>
                    <exon start="14365" stop="14343"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>378</number_coding_nucleotides>
                  <number_encoded_amino_acids>126</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TEHPLCWNDFKYIRSYALRMKGGLKVPLISLILIGFVCASIIILAYVKSPFLSYWTSSQDRVFQISPDYKVKDEEVLKERNRSGQSEENVNFESAISHSSMKDKVTEEPITNTEIEGSVALIHGDC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="14576" e_stop="14090"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="14576" e_stop="14090" e_length="487"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14576" stop="14090"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353355" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="5" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCAACACCTGGAATGCAGGATTGTTTGCATTGGTGCTTGCCTGGTGTTCCAGATACATGGAATGAAGTTCTTTTTGCTCAACTTTAATATTGCAAGACCGGCAAGGAACCAGTGCTTCAACATTGATCTCTTCAACACTAGTGCAACATGAATTGAATTGAATAATGTCTTGGATGATTTTGGCAATTGGAGCTTGACAAGTTGGATTCAGCTTTGATACATGGGGATTGCTGATCAGACAGCAGTTTGCACCATATTTTAGGAGTAGATGAGTTATACATTATTTTTGGAATTTATAGTTTGGTTTGTCCTACCATTTGTTAGAGACTAGATTCTTTGAGGGGTTGGGGTACGGAAGAGGCTTGACCCTTGACATGTACGGTGAGTTTGTAAGACATGAGAGTGTACTTGGAAGAACAACACAAGGGGATTTTTCTAGTGATCAGATGATGCTTAAATCCTAATTCATTTTTATCCTTTTATTTAT</gDNA_template>
            <first_frame> S  T  P  G  M  Q  D  C  L  H  W  C  L  P  G  V  P  D  T  W  N  E  V  L  F  A  Q  L  *  Y  C  K  T  G  K  E  P  V  L  Q  H  *  S  L  Q  H  *  C  N  M  N  *  I  E  *  C  L  G  *  F  W  Q  L  E  L  D  K  L  D  S  A  L  I  H  G  D  C  *  S  D  S  S  L  H  H  I  L  G  V  D  E  L  Y  I  I  F  G  I  Y  S  L  V  C  P  T  I  C  *  R  L  D  S  L  R  G  W  G  T  E  E  A  *  P  L  T  C  T  V  S  L  *  D  M  R  V  Y  L  E  E  Q  H  K  G  I  F  L  V  I  R  *  C  L  N  P  N  S  F  L  S  F  Y  L  </first_frame>
            <second_frame>  Q  H  L  E  C  R  I  V  C  I  G  A  C  L  V  F  Q  I  H  G  M  K  F  F  L  L  N  F  N  I  A  R  P  A  R  N  Q  C  F  N  I  D  L  F  N  T  S  A  T  *  I  E  L  N  N  V  L  D  D  F  G  N  W  S  L  T  S  W  I  Q  L  *  Y  M  G  I  A  D  Q  T  A  V  C  T  I  F  *  E  *  M  S  Y  T  L  F  L  E  F  I  V  W  F  V  L  P  F  V  R  D  *  I  L  *  G  V  G  V  R  K  R  L  D  P  *  H  V  R  *  V  C  K  T  *  E  C  T  W  K  N  N  T  R  G  F  F  *  *  S  D  D  A  *  I  L  I  H  F  Y  P  F  I  Y </second_frame>
            <third_frame>   N  T  W  N  A  G  L  F  A  L  V  L  A  W  C  S  R  Y  M  E  *  S  S  F  C  S  T  L  I  L  Q  D  R  Q  G  T  S  A  S  T  L  I  S  S  T  L  V  Q  H  E  L  N  *  I  M  S  W  M  I  L  A  I  G  A  *  Q  V  G  F  S  F  D  T  W  G  L  L  I  R  Q  Q  F  A  P  Y  F  R  S  R  *  V  I  H  Y  F  W  N  L  *  F  G  L  S  Y  H  L  L  E  T  R  F  F  E  G  L  G  Y  G  R  G  L  T  L  D  M  Y  G  E  F  V  R  H  E  S  V  L  G  R  T  T  Q  G  D  F  S  S  D  Q  M  M  L  K  S  *  F  I  F  I  L  L  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0284C08.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="29207" PGL_stop="27162"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="29207" e_stop="28993"/>
            <exon e_start="28410" e_stop="28254"/>
            <exon e_start="27869" e_stop="27792"/>
            <exon e_start="27553" e_stop="27453"/>
            <exon e_start="27194" e_stop="27162"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.946" e_score="0.967"/>
          <exon-intron don_prob="0.000" acc_prob="0.977" e_score="0.955"/>
          <exon-intron don_prob="0.885" acc_prob="0.994" e_score="0.987"/>
          <exon-intron don_prob="0.998" acc_prob="0.935" e_score="0.941"/>
          <exon-only e_score="0.939"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.967">
            <gDNA_exon_boundary e_start="29207" e_stop="28993" e_length="215"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.946">
            <gDNA_intron_boundary i_start="28992" i_stop="28411" i_length="582"/>
          </intron>
          <exon e_serial="2" e_score="0.955">
            <gDNA_exon_boundary e_start="28410" e_stop="28254" e_length="157"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.977">
            <gDNA_intron_boundary i_start="28253" i_stop="27870" i_length="384"/>
          </intron>
          <exon e_serial="3" e_score="0.987">
            <gDNA_exon_boundary e_start="27869" e_stop="27792" e_length="78"/>
          </exon>
          <intron i_serial="3" don_prob="0.885" acc_prob="0.994">
            <gDNA_intron_boundary i_start="27791" i_stop="27554" i_length="238"/>
          </intron>
          <exon e_serial="4" e_score="0.941">
            <gDNA_exon_boundary e_start="27553" e_stop="27453" e_length="101"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.935">
            <gDNA_intron_boundary i_start="27452" i_stop="27195" i_length="258"/>
          </intron>
          <exon e_serial="5" e_score="0.939">
            <gDNA_exon_boundary e_start="27194" e_stop="27162" e_length="33"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29207" stop="28993"/>
              <exon start="28410" stop="28254"/>
              <exon start="27869" stop="27792"/>
              <exon start="27553" stop="27453"/>
              <exon start="27194" stop="27162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E582660" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AACCAATTGAGGATACCAAACAAGCTCTTTGTATGGCGTTGTCAAAGCTTGATTCTCAAGATCTGTTCAATATAATAGCTTTCAACAACGAAAAATATCTATTTTCATCATCACTCGAGTTGGCAACCAAGAAGGCTATTGAAAACGCAACTCAGTGGATTGGAACGAATTTTATTGCTGGTGGTGGCACAAATATTTTGAATCCATTGACTCAG : GCCATGGAGATGTTTTCCTATACCCAGCAACACATTCCAATGATTTTCCTGGTCACTGATGGAGCTGTTGAAGATGAAAGACACATCTGTGATGTTCTGAAGAGTCATCTGATGCAAAAACAAATGATATGCCCGCGGCTTTACGCATTTGGCATAG : GATTGTTCTGCAACCATTACTTTCTCCGCATGCTTGCAATGATGAGTCGTGGCCACTATAATGCTGCTTATGATGTTG : ATTCTATTGAAGTTCGCGTTGAACAGCTGTTCTCCAGGGCATCATCTGTCATTCTTGCGGATATTGCCTTTGAGAACCTTGATGGTCTTGAAGAATTTGAG : GTCTTTCCAACTCCAGTTCCAGACCTTTCATCC</gDNA_template>
            <first_frame> N  Q  L  R  I  P  N  K  L  F  V  W  R  C  Q  S  L  I  L  K  I  C  S  I  *  *  L  S  T  T  K  N  I  Y  F  H  H  H  S  S  W  Q  P  R  R  L  L  K  T  Q  L  S  G  L  E  R  I  L  L  L  V  V  A  Q  I  F  *  I  H  *  L  R :   P  W  R  C  F  P  I  P  S  N  T  F  Q  *  F  S  W  S  L  M  E  L  L  K  M  K  D  T  S  V  M  F  *  R  V  I  *  C  K  N  K  *  Y  A  R  G  F  T  H  L  A  *  :  D  C  S  A  T  I  T  F  S  A  C  L  Q  *  *  V  V  A  T  I  M  L  L  M  M  L  :  I  L  L  K  F  A  L  N  S  C  S  P  G  H  H  L  S  F  L  R  I  L  P  L  R  T  L  M  V  L  K  N  L  R :   S  F  Q  L  Q  F  Q  T  F  H   </first_frame>
            <second_frame>  T  N  *  G  Y  Q  T  S  S  L  Y  G  V  V  K  A  *  F  S  R  S  V  Q  Y  N  S  F  Q  Q  R  K  I  S  I  F  I  I  T  R  V  G  N  Q  E  G  Y  *  K  R  N  S  V  D  W  N  E  F  Y  C  W  W  W  H  K  Y  F  E  S  I  D  S   : G  H  G  D  V  F  L  Y  P  A  T  H  S  N  D  F  P  G  H  *  W  S  C  *  R  *  K  T  H  L  *  C  S  E  E  S  S  D  A  K  T  N  D  M  P  A  A  L  R  I  W  H  R :   I  V  L  Q  P  L  L  S  P  H  A  C  N  D  E  S  W  P  L  *  C  C  L  *  C  * :   F  Y  *  S  S  R  *  T  A  V  L  Q  G  I  I  C  H  S  C  G  Y  C  L  *  E  P  *  W  S  *  R  I  *   : G  L  S  N  S  S  S  R  P  F  I  </second_frame>
            <third_frame>   P  I  E  D  T  K  Q  A  L  C  M  A  L  S  K  L  D  S  Q  D  L  F  N  I  I  A  F  N  N  E  K  Y  L  F  S  S  S  L  E  L  A  T  K  K  A  I  E  N  A  T  Q  W  I  G  T  N  F  I  A  G  G  G  T  N  I  L  N  P  L  T  Q  :  A  M  E  M  F  S  Y  T  Q  Q  H  I  P  M  I  F  L  V  T  D  G  A  V  E  D  E  R  H  I  C  D  V  L  K  S  H  L  M  Q  K  Q  M  I  C  P  R  L  Y  A  F  G  I   : G  L  F  C  N  H  Y  F  L  R  M  L  A  M  M  S  R  G  H  Y  N  A  A  Y  D  V   : D  S  I  E  V  R  V  E  Q  L  F  S  R  A  S  S  V  I  L  A  D  I  A  F  E  N  L  D  G  L  E  E  F  E  :  V  F  P  T  P  V  P  D  L  S  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29205" stop="28993"/>
                    <exon start="28410" stop="28254"/>
                    <exon start="27869" stop="27792"/>
                    <exon start="27553" stop="27453"/>
                    <exon start="27194" stop="27162"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>582</number_coding_nucleotides>
                  <number_encoded_amino_acids>194</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PIEDTKQALCMALSKLDSQDLFNIIAFNNEKYLFSSSLELATKKAIENATQWIGTNFIAGGGTNILNPLTQAMEMFSYTQQHIPMIFLVTDGAVEDERHICDVLKSHLMQKQMICPRLYAFGIGLFCNHYFLRMLAMMSRGHYNAAYDVDSIEVRVEQLFSRASSVILADIAFENLDGLEEFEVFPTPVPDLSS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="67174" PGL_stop="59574"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="62460" e_stop="60949"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.910"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.910">
            <gDNA_exon_boundary e_start="62460" e_stop="60949" e_length="1512"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62460" stop="61902"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244046" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62376" stop="61587"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356912" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62300" stop="61603"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356209" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61739" stop="61020"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356614" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61736" stop="61073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352401" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61381" stop="60949"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352180" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGACACAAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAACGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGTTCGTTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGGTTGCCCATCACCTCGGCCGTTCTGGTAACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAACATTTGGAGGTCTGTAACTCTGTTTTGGACAATATCACTTAATATGTCCAATCTCCCCACATCCATAGCACTCTCTGGGTTCATGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCGGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTTAGTAACTTCCCGAACCCTGTCCTCTAGTGTAAGTACCGTTAAACTCACCTCCCTTTCGAAACCTTTTTGATGTCGATGTCGTAGTGAAGTCATCTGGCTTTACTCCTTCCACTTCTATCACAAAGTCTACCACCTCTTGGAAGGATTTTGCCGTTGCCGCTATCTGTAAGGCCGAAATCCGCAATTCTGACCTTAACCCCTTCACAAACCGGCGAATTCGATCTTGGGGACTGAAACATAATTGGGTGGCATATCTGGATAGTGCGCGAAACCTAGCCTCGTAAGCATTTACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTTCGGGGGATATACTTCTCCATAAAAAAGCTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTCTGTTGGTTGACACTCAATATGTGACCGCCACCACATTTTGGCGTTCCCTTGAAACTGATAACTCACGAACTCAACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCATGTCAGTCAACCAGAAAATCGTAAGCATCCTCAGATTCCACACCCTTGAAGACTGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAAACGTGGAAACGTGCCTATTTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACCTCCGGAGCCTGAGGTGCTGGTGCAGAAAACACTGGGGGTGTCTGGCCCTGATCAGACAACCCACTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTTCACTTGTTCATTCACCCCATCCTCCCCCTCTCTTATCACTTCCTCAGTCGGTGGGGGAGTCACTGCCCTAGTATCAGATGGGCTAGGTGCTCGTCCTCTTCCTCTAGAGGACGCCCTCCCACGACCTCTACCACGGCCTCTTGCCGCTGCTCTTC</gDNA_template>
            <first_frame> R  H  K  *  A  Y  Q  V  I  H  N  V  N  L  D  H  *  Q  M  R  K  I  H  K  K  T  W  I  Q  D  Q  T  I  Q  K  P  C  N  H  K  P  E  D  Y  L  *  *  Q  H  Q  M  P  P  L  Q  T  A  Q  G  K  R  N  N  G  P  Y  R  L  S  V  R  C  P  Y  H  V  V  M  *  W  L  Q  V  A  H  H  L  G  R  S  G  N  H  H  Y  L  D  H  H  V  L  Q  N  N  G  L  Y  H  D  H  L  Y  L  *  H  L  E  V  C  N  S  V  L  D  N  I  T  *  Y  V  Q  S  P  H  I  H  S  T  L  W  V  H  A  *  V  S  Q  R  S  V  D  R  S  E  V  D  P  Q  L  Q  S  V  V  K  T  E  L  V  G  L  S  N  F  P  N  P  V  L  *  C  K  Y  R  *  T  H  L  P  F  E  T  F  L  M  S  M  S  *  *  S  H  L  A  L  L  L  P  L  L  S  Q  S  L  P  P  L  G  R  I  L  P  L  P  L  S  V  R  P  K  S  A  I  L  T  L  T  P  S  Q  T  G  E  F  D  L  G  D  *  N  I  I  G  W  H  I  W  I  V  R  E  T  *  P  R  K  H  L  P  T  S  Y  L  A  L  G  S  R  T  H  P  F  S  Y  P  S  K  F  G  G  Y  T  S  P  *  K  S  *  R  M  R  P  K  S  *  V  V  P  L  L  V  D  T  Q  Y  V  T  A  T  T  F  W  R  S  L  E  T  D  N  S  R  T  Q  H  Q  T  V  L  L  Y  P  S  C  V  V  A  H  V  S  Q  P  E  N  R  K  H  P  Q  I  P  H  P  *  R  L  E  V  S  I  S  R  T  Y  *  K  V  H  A  D  H  L  S  L  *  A  Q  *  S  N  V  E  T  C  L  F  P  M  E  H  P  C  G  E  P  *  *  P  H  V  V  P  P  E  P  E  V  L  V  Q  K  T  L  G  V  S  G  P  D  Q  T  T  H  *  D  K  P  E  P  D  *  S  S  L  G  *  V  G  V  A  F  P  H  F  S  L  V  H  S  P  H  P  P  P  L  L  S  L  P  Q  S  V  G  E  S  L  P  *  Y  Q  M  G  *  V  L  V  L  F  L  *  R  T  P  S  H  D  L  Y  H  G  L  L  P  L  L  F </first_frame>
            <second_frame>  D  T  N  R  H  I  K  *  F  T  M  *  I  *  T  I  S  K  *  G  R  Y  I  R  K  R  G  S  R  I  K  Q  Y  R  S  H  A  I  T  N  Q  K  I  T  C  D  D  S  I  R  C  L  R  F  R  P  P  R  E  S  V  T  M  G  P  I  V  C  L  F  V  A  P  T  M  L  *  C  S  G  S  R  L  P  I  T  S  A  V  L  V  T  T  I  T  S  T  T  T  S  S  R  I  T  A  S  T  M  T  T  S  T  S  N  I  W  R  S  V  T  L  F  W  T  I  S  L  N  M  S  N  L  P  T  S  I  A  L  S  G  F  M  H  R  S  L  R  E  V  L  T  G  R  R  W  T  P  N  Y  S  L  *  *  R  L  N  W  S  D  L  V  T  S  R  T  L  S  S  S  V  S  T  V  K  L  T  S  L  S  K  P  F  *  C  R  C  R  S  E  V  I  W  L  Y  S  F  H  F  Y  H  K  V  Y  H  L  L  E  G  F  C  R  C  R  Y  L  *  G  R  N  P  Q  F  *  P  *  P  L  H  K  P  A  N  S  I  L  G  T  E  T  *  L  G  G  I  S  G  *  C  A  K  P  S  L  V  S  I  Y  R  H  P  T  L  L  *  A  Q  E  L  I  P  F  P  I  P  Q  S  S  G  D  I  L  L  H  K  K  A  R  E  *  G  P  S  H  R  W  C  L  C  W  L  T  L  N  M  *  P  P  P  H  F  G  V  P  L  K  L  I  T  H  E  L  N  T  K  P  F  Y  Y  T  H  L  V  *  *  L  M  S  V  N  Q  K  I  V  S  I  L  R  F  H  T  L  E  D  W  R  F  Q  F  Q  E  L  T  E  K  F  M  L  I  I  C  H  Y  R  P  S  S  Q  T  W  K  R  A  Y  F  Q  W  N  I  H  A  G  S  H  S  S  R  M  L  Y  L  R  S  L  R  C  W  C  R  K  H  W  G  C  L  A  L  I  R  Q  P  T  K  I  S  Q  N  L  I  D  H  L  W  G  R  L  G  W  H  F  L  I  F  H  L  F  I  H  P  I  L  P  L  S  Y  H  F  L  S  R  W  G  S  H  C  P  S  I  R  W  A  R  C  S  S  S  S  S  R  G  R  P  P  T  T  S  T  T  A  S  C  R  C  S   </second_frame>
            <third_frame>   T  Q  I  G  I  S  S  N  S  Q  C  K  F  R  P  L  A  N  E  E  D  T  *  E  N  V  D  P  G  S  N  N  T  E  A  M  Q  S  Q  T  R  R  L  P  V  M  T  A  S  D  A  S  A  S  D  R  P  G  K  A  *  Q  W  A  L  S  F  V  C  S  L  P  L  P  C  C  D  V  V  A  P  G  C  P  S  P  R  P  F  W  *  P  P  L  P  R  P  P  R  P  P  E  *  R  P  L  P  *  P  P  L  P  L  T  F  G  G  L  *  L  C  F  G  Q  Y  H  L  I  C  P  I  S  P  H  P  *  H  S  L  G  S  C  I  G  L  S  E  K  C  *  P  V  G  G  G  P  P  T  T  V  C  S  E  D  *  I  G  R  T  *  *  L  P  E  P  C  P  L  V  *  V  P  L  N  S  P  P  F  R  N  L  F  D  V  D  V  V  V  K  S  S  G  F  T  P  S  T  S  I  T  K  S  T  T  S  W  K  D  F  A  V  A  A  I  C  K  A  E  I  R  N  S  D  L  N  P  F  T  N  R  R  I  R  S  W  G  L  K  H  N  W  V  A  Y  L  D  S  A  R  N  L  A  S  *  A  F  T  D  I  L  P  C  S  R  L  K  N  S  S  L  F  L  S  L  K  V  R  G  I  Y  F  S  I  K  K  L  E  N  E  A  Q  V  I  G  G  A  S  V  G  *  H  S  I  C  D  R  H  H  I  L  A  F  P  *  N  *  *  L  T  N  S  T  P  N  R  S  T  I  P  I  L  C  S  S  S  C  Q  S  T  R  K  S  *  A  S  S  D  S  T  P  L  K  T  G  G  F  N  F  K  N  L  L  K  S  S  C  *  S  F  V  I  I  G  P  V  V  K  R  G  N  V  P  I  S  N  G  T  S  M  R  G  A  I  V  A  A  C  C  T  S  G  A  *  G  A  G  A  E  N  T  G  G  V  W  P  *  S  D  N  P  L  R  *  A  R  T  *  L  I  I  S  G  V  G  W  G  G  I  S  S  F  F  T  C  S  F  T  P  S  S  P  S  L  I  T  S  S  V  G  G  G  V  T  A  L  V  S  D  G  L  G  A  R  P  L  P  L  E  D  A  L  P  R  P  L  P  R  P  L  A  A  A  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61427" stop="60951"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>477</number_coding_nucleotides>
                  <number_encoded_amino_acids>159</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LMSVNQKIVSILRFHTLEDWRFQFQELTEKFMLIICHYRPSSQTWKRAYFQWNIHAGSHSSRMLYLRSLRCWCRKHWGCLALIRQPTKISQNLIDHLWGRLGWHFLIFHLFIHPILPLSYHFLSRWGSHCPSIRWARCSSSSSRGRPPTTSTTASCRCS</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="62228" stop="61974"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>252</number_coding_nucleotides>
                  <number_encoded_amino_acids>84</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CSGSRLPITSAVLVTTITSTTTSSRITASTMTTSTSNIWRSVTLFWTISLNMSNLPTSIALSGFMHRSLREVLTGRRWTPNYSL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61918" stop="61667"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>249</number_coding_nucleotides>
                  <number_encoded_amino_acids>83</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VPLNSPPFRNLFDVDVVVKSSGFTPSTSITKSTTSWKDFAVAAICKAEIRNSDLNPFTNRRIRSWGLKHNWVAYLDSARNLAS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="67174" e_stop="66887"/>
            <exon e_start="66768" e_stop="66702"/>
            <exon e_start="59733" e_stop="59574"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.927"/>
          <exon-intron don_prob="0.132" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.969"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.927">
            <gDNA_exon_boundary e_start="67174" e_stop="66887" e_length="288"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="66886" i_stop="66769" i_length="118"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="66768" e_stop="66702" e_length="67"/>
          </exon>
          <intron i_serial="2" don_prob="0.132" acc_prob="0.000">
            <gDNA_intron_boundary i_start="66701" i_stop="59734" i_length="6968"/>
          </intron>
          <exon e_serial="3" e_score="0.969">
            <gDNA_exon_boundary e_start="59733" e_stop="59574" e_length="160"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67174" stop="66887"/>
              <exon start="66768" stop="66702"/>
              <exon start="59733" stop="59574"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242359" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGTATGTATTAAGCAATATCATAAAATCAACTAATATCCTTAACATGCAGCATTTATAGTTACCATAACCCTTGGTTACAACACCAAGCACATCAATGAGGACTCACACCACCTCATCATACTCATTTGGGAATTTAGTTCATTAGATTGGATATATTATCATATTTCAAGATTCATTATCTTTATTCCCCTCGTGTCGGTACGTGACACTCCGCTCCTCAATATACTATCCTGGTACCAGAACGTGGCACCCGATCCATATTTTATCCTGGTGTCGGAACGTGACAC : CCGATCCATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTACCGGAAC : GTGGCACCCGATCCATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTACCGGAACGTGGCACCCGATCCCCTAATCTCACTACTTTCATTCATCAAGCCTTCTTTCATACCAAGGCATCATCATTATCAAAGTAGATTAGG</gDNA_template>
            <first_frame> S  M  Y  *  A  I  S  *  N  Q  L  I  S  L  T  C  S  I  Y  S  Y  H  N  P  W  L  Q  H  Q  A  H  Q  *  G  L  T  P  P  H  H  T  H  L  G  I  *  F  I  R  L  D  I  L  S  Y  F  K  I  H  Y  L  Y  S  P  R  V  G  T  *  H  S  A  P  Q  Y  T  I  L  V  P  E  R  G  T  R  S  I  F  Y  P  G  V  G  T  *  H  :  P  I  H  I  L  S  W  C  R  N  V  T  P  D  P  Y  S  I  L  V  P  E   : R  G  T  R  S  I  F  Y  P  G  V  G  T  *  H  P  I  H  I  L  S  W  Y  R  N  V  A  P  D  P  L  I  S  L  L  S  F  I  K  P  S  F  I  P  R  H  H  H  Y  Q  S  R  L   </first_frame>
            <second_frame>  V  C  I  K  Q  Y  H  K  I  N  *  Y  P  *  H  A  A  F  I  V  T  I  T  L  G  Y  N  T  K  H  I  N  E  D  S  H  H  L  I  I  L  I  W  E  F  S  S  L  D  W  I  Y  Y  H  I  S  R  F  I  I  F  I  P  L  V  S  V  R  D  T  P  L  L  N  I  L  S  W  Y  Q  N  V  A  P  D  P  Y  F  I  L  V  S  E  R  D  T :   R  S  I  F  Y  P  G  V  G  T  *  H  P  I  H  I  L  S  W  Y  R  N  :  V  A  P  D  P  Y  S  I  L  V  S  E  R  D  T  R  S  I  F  Y  P  G  T  G  T  W  H  P  I  P  *  S  H  Y  F  H  S  S  S  L  L  S  Y  Q  G  I  I  I  I  K  V  D  *  </second_frame>
            <third_frame>   Y  V  L  S  N  I  I  K  S  T  N  I  L  N  M  Q  H  L  *  L  P  *  P  L  V  T  T  P  S  T  S  M  R  T  H  T  T  S  S  Y  S  F  G  N  L  V  H  *  I  G  Y  I  I  I  F  Q  D  S  L  S  L  F  P  S  C  R  Y  V  T  L  R  S  S  I  Y  Y  P  G  T  R  T  W  H  P  I  H  I  L  S  W  C  R  N  V  T   : P  D  P  Y  S  I  L  V  S  E  R  D  T  R  S  I  F  Y  P  G  T  G  T :   W  H  P  I  H  I  L  S  W  C  R  N  V  T  P  D  P  Y  S  I  L  V  P  E  R  G  T  R  S  P  N  L  T  T  F  I  H  Q  A  F  F  H  T  K  A  S  S  L  S  K  *  I  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67028" stop="66887"/>
                    <exon start="66768" stop="66702"/>
                    <exon start="59733" stop="59580"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>360</number_coding_nucleotides>
                  <number_encoded_amino_acids>120</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IGYIIIFQDSLSLFPSCRYVTLRSSIYYPGTRTWHPIHILSWCRNVTPDPYSILVSERDTRSIFYPGTGTWHPIHILSWCRNVTPDPYSILVPERGTRSPNLTTFIHQAFFHTKASSLSK*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67131" stop="66887"/>
                    <exon start="66768" stop="66735"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>276</number_coding_nucleotides>
                  <number_encoded_amino_acids>92</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HAAFIVTITLGYNTKHINEDSHHLIILIWEFSSLDWIYYHISRFIIFIPLVSVRDTPLLNILSWYQNVAPDPYFILVSERDTRSIFYPGVGT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="59988" PGL_stop="60942"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="59988" e_stop="60942"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.934"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.934">
            <gDNA_exon_boundary e_start="59988" e_stop="60942" e_length="955"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59988" stop="60222"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209683" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60148" stop="60878"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351546" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60148" stop="60803"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356696" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60148" stop="60728"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356206" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60651" stop="60942"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355114" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAATGAACTAAATTCCCAAATGAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGTTGTAACCAAGGGTTATGGTAACTATAAATGCTGCATGTTAAGGATATTAGTTGATTTTATGATATTGCTTAATACATACTGTTCCCTATTTTGAGTTGACCGATGATATCTACTCAGTACCCGTGGTTTGTACTGACCCCTACTTTTATGTTTTCTTCTGGTTATTTGTGGAGTGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCAAGCCAGTCTTCGTCACACCGGATCTTCAGGGTGAGCTAACGCGTCTAGCTTGGACTGGATCTTCTCCTTCATGTCTTGATGCCTTGAACCTCCGGCATGGACTAGCTTCTTATGTATTTTTAGCTTTTAGAAACTCTTAGAATTAGTAGTTTAAAGTAGATGTTCTTGTGATGATGACTTCCAGGTTTTGGAAATAATAGATGTTGAATATTGATAGTTATTGAATTGGTTTTTATTAATGAGTTTAAGTCTTCCGCATTATTTTCTGTTGATGTTACATTGAAATGTTAAGGTTTAGATTGGTTGGTTCGCTCACATAGGAGGGTAAGTGTGGGTGCCAGTCGCGGCCCGGATTTGGGTCGTGACAAACTTGGTATCAGAGCATTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGAGTCTTAAGGAACGGTAGGGGGACGCCTTTACTTTTCCTTGAGAGGCTATAAGACTTTAGGAAAATTTCACTCTTTCGTTCTTTCTTTCGTGCTACTACTTGAGTCCAATTGGTATCTAGGCGATATGAATTGGTATTTGACCATCTTCACTCTCTTTCGCAGATGTTTAGAACTAGAGCAACGACTACGCCTACGCCAACACCAGCACCGGCGAGACAAGGTGCGTCTGAGCCAGCCACTGGGGCTGTAG</gDNA_template>
            <first_frame> *  *  T  K  F  P  N  E  Y  D  E  E  V  *  V  L  I  D  V  L  G  V  V  T  K  G  Y  G  N  Y  K  C  C  M  L  R  I  L  V  D  F  M  I  L  L  N  T  Y  C  S  L  F  *  V  D  R  *  Y  L  L  S  T  R  G  L  Y  *  P  L  L  L  C  F  L  L  V  I  C  G  V  Q  Q  T  C  R  H  L  R  L  N  S  N  S  S  Q  S  S  S  H  R  I  F  R  V  S  *  R  V  *  L  G  L  D  L  L  L  H  V  L  M  P  *  T  S  G  M  D  *  L  L  M  Y  F  *  L  L  E  T  L  R  I  S  S  L  K  *  M  F  L  *  *  *  L  P  G  F  G  N  N  R  C  *  I  L  I  V  I  E  L  V  F  I  N  E  F  K  S  S  A  L  F  S  V  D  V  T  L  K  C  *  G  L  D  W  L  V  R  S  H  R  R  V  S  V  G  A  S  R  G  P  D  L  G  R  D  K  L  G  I  R  A  L  G  S  L  V  S  S  H  K  N  R  S  S  R  V  L  R  N  G  R  G  T  P  L  L  F  L  E  R  L  *  D  F  R  K  I  S  L  F  R  S  F  F  R  A  T  T  *  V  Q  L  V  S  R  R  Y  E  L  V  F  D  H  L  H  S  L  S  Q  M  F  R  T  R  A  T  T  T  P  T  P  T  P  A  P  A  R  Q  G  A  S  E  P  A  T  G  A  V  </first_frame>
            <second_frame>  N  E  L  N  S  Q  M  S  M  M  R  R  C  E  S  S  L  M  C  L  V  L  *  P  R  V  M  V  T  I  N  A  A  C  *  G  Y  *  L  I  L  *  Y  C  L  I  H  T  V  P  Y  F  E  L  T  D  D  I  Y  S  V  P  V  V  C  T  D  P  Y  F  Y  V  F  F  W  L  F  V  E  C  S  K  R  A  V  I  F  D  S  T  V  T  Q  A  S  L  R  H  T  G  S  S  G  *  A  N  A  S  S  L  D  W  I  F  S  F  M  S  *  C  L  E  P  P  A  W  T  S  F  L  C  I  F  S  F  *  K  L  L  E  L  V  V  *  S  R  C  S  C  D  D  D  F  Q  V  L  E  I  I  D  V  E  Y  *  *  L  L  N  W  F  L  L  M  S  L  S  L  P  H  Y  F  L  L  M  L  H  *  N  V  K  V  *  I  G  W  F  A  H  I  G  G  *  V  W  V  P  V  A  A  R  I  W  V  V  T  N  L  V  S  E  H  *  V  R  W  S  H  H  T  R  T  G  L  V  E  S  *  G  T  V  G  G  R  L  Y  F  S  L  R  G  Y  K  T  L  G  K  F  H  S  F  V  L  S  F  V  L  L  L  E  S  N  W  Y  L  G  D  M  N  W  Y  L  T  I  F  T  L  F  R  R  C  L  E  L  E  Q  R  L  R  L  R  Q  H  Q  H  R  R  D  K  V  R  L  S  Q  P  L  G  L  * </second_frame>
            <third_frame>   M  N  *  I  P  K  *  V  *  *  G  G  V  S  P  H  *  C  A  W  C  C  N  Q  G  L  W  *  L  *  M  L  H  V  K  D  I  S  *  F  Y  D  I  A  *  Y  I  L  F  P  I  L  S  *  P  M  I  S  T  Q  Y  P  W  F  V  L  T  P  T  F  M  F  S  S  G  Y  L  W  S  A  A  N  V  P  S  S  S  T  Q  Q  *  L  K  P  V  F  V  T  P  D  L  Q  G  E  L  T  R  L  A  W  T  G  S  S  P  S  C  L  D  A  L  N  L  R  H  G  L  A  S  Y  V  F  L  A  F  R  N  S  *  N  *  *  F  K  V  D  V  L  V  M  M  T  S  R  F  W  K  *  *  M  L  N  I  D  S  Y  *  I  G  F  Y  *  *  V  *  V  F  R  I  I  F  C  *  C  Y  I  E  M  L  R  F  R  L  V  G  S  L  T  *  E  G  K  C  G  C  Q  S  R  P  G  F  G  S  *  Q  T  W  Y  Q  S  I  R  F  V  G  L  I  T  Q  E  Q  V  *  *  S  L  K  E  R  *  G  D  A  F  T  F  P  *  E  A  I  R  L  *  E  N  F  T  L  S  F  F  L  S  C  Y  Y  L  S  P  I  G  I  *  A  I  *  I  G  I  *  P  S  S  L  S  F  A  D  V  *  N  *  S  N  D  Y  A  Y  A  N  T  S  T  G  E  T  R  C  V  *  A  S  H  W  G  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="60700" stop="60942"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GTVGGRLYFSLRGYKTLGKFHSFVLSFVLLLESNWYLGDMNWYLTIFTLFRRCLELEQRLRLRQHQHRRDKVRLSQPLGL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="61016" PGL_stop="61569"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="61016" e_stop="61569"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.919"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.919">
            <gDNA_exon_boundary e_start="61016" e_stop="61569" e_length="554"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61016" stop="61569"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329287" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61221" stop="61559"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245958" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACCTAGCCCATCTGATACTAGGGCAGTGACTCCCCCACCGACTGAGGAAGTGATAAGAGAGGGGGAGGATGGGGTGAATGAACAAGTGAAAAATGAGGAAATGCCACCCCAACCTACCCCAGAGATGATCAATCAGGTTCTGGCTTATCTTAGTGGGTTGTCTGATCAGGGCCAGACACCCCCAGTGTTTTCTGCACCAGCACCTCAGGCTCCGGAGGTACAACATGCGGCTACTATGGCTCCCCGCATGGATGTTCCATTGGAAATAGGCACGTTTCCACGTTTGACTACTGGGCCTATAATGACAAATGATCAGCATGAACTTTTCAGTAAGTTCTTGAAATTGAAACCTCCAGTCTTCAAGGGTGTGGAATCTGAGGATGCTTACGATTTTCTGGTTGACTGACATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTCGTGAGTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATATTGAGTGTCAACCAACAGAGGCACCACCTATGACTTGGGCCTCATTCT</gDNA_template>
            <first_frame> T  *  P  I  *  Y  *  G  S  D  S  P  T  D  *  G  S  D  K  R  G  G  G  W  G  E  *  T  S  E  K  *  G  N  A  T  P  T  Y  P  R  D  D  Q  S  G  S  G  L  S  *  W  V  V  *  S  G  P  D  T  P  S  V  F  C  T  S  T  S  G  S  G  G  T  T  C  G  Y  Y  G  S  P  H  G  C  S  I  G  N  R  H  V  S  T  F  D  Y  W  A  Y  N  D  K  *  S  A  *  T  F  Q  *  V  L  E  I  E  T  S  S  L  Q  G  C  G  I  *  G  C  L  R  F  S  G  *  L  T  *  A  T  T  Q  D  G  Y  S  R  T  V  W  C  *  V  R  E  L  S  V  S  R  E  R  Q  N  V  V  A  V  T  Y  *  V  S  T  N  R  G  T  T  Y  D  L  G  L  I   </first_frame>
            <second_frame>  P  S  P  S  D  T  R  A  V  T  P  P  P  T  E  E  V  I  R  E  G  E  D  G  V  N  E  Q  V  K  N  E  E  M  P  P  Q  P  T  P  E  M  I  N  Q  V  L  A  Y  L  S  G  L  S  D  Q  G  Q  T  P  P  V  F  S  A  P  A  P  Q  A  P  E  V  Q  H  A  A  T  M  A  P  R  M  D  V  P  L  E  I  G  T  F  P  R  L  T  T  G  P  I  M  T  N  D  Q  H  E  L  F  S  K  F  L  K  L  K  P  P  V  F  K  G  V  E  S  E  D  A  Y  D  F  L  V  D  *  H  E  L  L  H  K  M  G  I  V  E  R  F  G  V  E  F  V  S  Y  Q  F  Q  G  N  A  K  M  W  W  R  S  H  I  E  C  Q  P  T  E  A  P  P  M  T  W  A  S  F  </second_frame>
            <third_frame>   L  A  H  L  I  L  G  Q  *  L  P  H  R  L  R  K  *  *  E  R  G  R  M  G  *  M  N  K  *  K  M  R  K  C  H  P  N  L  P  Q  R  *  S  I  R  F  W  L  I  L  V  G  C  L  I  R  A  R  H  P  Q  C  F  L  H  Q  H  L  R  L  R  R  Y  N  M  R  L  L  W  L  P  A  W  M  F  H  W  K  *  A  R  F  H  V  *  L  L  G  L  *  *  Q  M  I  S  M  N  F  S  V  S  S  *  N  *  N  L  Q  S  S  R  V  W  N  L  R  M  L  T  I  F  W  L  T  D  M  S  Y  Y  T  R  W  V  *  *  N  G  L  V  L  S  S  *  V  I  S  F  K  G  T  P  K  C  G  G  G  H  I  L  S  V  N  Q  Q  R  H  H  L  *  L  G  P  H  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61017" stop="61421"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>402</number_coding_nucleotides>
                  <number_encoded_amino_acids>134</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PSPSDTRAVTPPPTEEVIREGEDGVNEQVKNEEMPPQPTPEMINQVLAYLSGLSDQGQTPPVFSAPAPQAPEVQHAATMAPRMDVPLEIGTFPRLTTGPIMTNDQHELFSKFLKLKPPVFKGVESEDAYDFLVD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="61643" PGL_stop="63087"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="61643" e_stop="61815"/>
            <exon e_start="62560" e_stop="63087"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.867"/>
          <exon-only e_score="0.928"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.867">
            <gDNA_exon_boundary e_start="61643" e_stop="61815" e_length="173"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="61816" i_stop="62559" i_length="744"/>
          </intron>
          <exon e_serial="2" e_score="0.928">
            <gDNA_exon_boundary e_start="62560" e_stop="63087" e_length="528"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61643" stop="61815"/>
              <exon start="62560" stop="63087"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353359" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCAAGGTAGGATGTCGGTAAATGCTTACGAGGCTAGGTTTCGCGCACTATCCAGATATGCCACCCAATTATGTTTCAGTCCCCAAGATCGAATTCGCCGGTTTGTGAAGGGGTTAAGGTCAGAATTGCGGATTTCGGCCTTACAGATAGCGGCAACGGCAAAATCCTTCCAAG : AAATGGATGATTTTGATGTGATTCTGGGTATGACTTGGCTTTCTCCGCAATTTGCAATCTTGGATTGTAATACTAAAACGGTGACGTTAGCCAAGCCTGGGACAGACCCGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTCCGCATCGTCTCCTTTCTTCGTGCTAAGAAAATGATTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTGAGTCGGTTTCAGTAGTTCGTGAGTTTCTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCGGATAGGGATATTGACTTCTGTATTGATCTCGAACCGGGCACACGCCCCATTTCTATACCCCCTTATAGAATGGCTCCCGCGGAGTTAAGAGAGTTAAAAGCACAACTTCAAGTGTTATTGAACAAAGGCTTTATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGGTTTTGTTTGTAAAGAAGAAGGATGGGAGTTTTCGAATGTGTATAGACTACA</gDNA_template>
            <first_frame> A  R  *  D  V  G  K  C  L  R  G  *  V  S  R  T  I  Q  I  C  H  P  I  M  F  Q  S  P  R  S  N  S  P  V  C  E  G  V  K  V  R  I  A  D  F  G  L  T  D  S  G  N  G  K  I  L  P  R :   N  G  *  F  *  C  D  S  G  Y  D  L  A  F  S  A  I  C  N  L  G  L  *  Y  *  N  G  D  V  S  Q  A  W  D  R  P  V  S  V  G  G  *  L  H  F  Q  S  G  P  H  R  L  L  S  S  C  *  E  N  D  *  *  R  V  F  S  F  L  G  T  S  Q  G  *  H  Y  P  S  T  F  D  *  V  G  F  S  S  S  *  V  S  G  C  V  P  C  R  S  S  W  Y  A  T  G  *  G  Y  *  L  L  Y  *  S  R  T  G  H  T  P  H  F  Y  T  P  L  *  N  G  S  R  G  V  K  R  V  K  S  T  T  S  S  V  I  E  Q  R  L  Y  *  T  K  C  I  S  L  G  C  S  G  F  V  C  K  E  E  G  W  E  F  S  N  V  Y  R  L   </first_frame>
            <second_frame>  Q  G  R  M  S  V  N  A  Y  E  A  R  F  R  A  L  S  R  Y  A  T  Q  L  C  F  S  P  Q  D  R  I  R  R  F  V  K  G  L  R  S  E  L  R  I  S  A  L  Q  I  A  A  T  A  K  S  F  Q   : E  M  D  D  F  D  V  I  L  G  M  T  W  L  S  P  Q  F  A  I  L  D  C  N  T  K  T  V  T  L  A  K  P  G  T  D  P  L  V  W  E  G  D  Y  T  S  N  P  V  R  I  V  S  F  L  R  A  K  K  M  I  S  K  G  C  L  A  F  L  A  H  L  K  D  D  T  T  Q  V  P  S  I  E  S  V  S  V  V  R  E  F  L  D  V  F  P  A  D  L  P  G  M  P  P  D  R  D  I  D  F  C  I  D  L  E  P  G  T  R  P  I  S  I  P  P  Y  R  M  A  P  A  E  L  R  E  L  K  A  Q  L  Q  V  L  L  N  K  G  F  I  R  P  S  A  S  P  W  G  A  P  V  L  F  V  K  K  K  D  G  S  F  R  M  C  I  D  Y  </second_frame>
            <third_frame>   K  V  G  C  R  *  M  L  T  R  L  G  F  A  H  Y  P  D  M  P  P  N  Y  V  S  V  P  K  I  E  F  A  G  L  *  R  G  *  G  Q  N  C  G  F  R  P  Y  R  *  R  Q  R  Q  N  P  S  K  :  K  W  M  I  L  M  *  F  W  V  *  L  G  F  L  R  N  L  Q  S  W  I  V  I  L  K  R  *  R  *  P  S  L  G  Q  T  R  *  C  G  R  V  T  T  L  P  I  R  S  A  S  S  P  F  F  V  L  R  K  *  L  V  K  G  V  *  L  S  W  H  I  S  R  M  T  L  P  K  Y  L  R  L  S  R  F  Q  *  F  V  S  F  W  M  C  S  L  Q  I  F  L  V  C  H  R  I  G  I  L  T  S  V  L  I  S  N  R  A  H  A  P  F  L  Y  P  L  I  E  W  L  P  R  S  *  E  S  *  K  H  N  F  K  C  Y  *  T  K  A  L  L  D  Q  V  H  L  L  G  V  L  R  F  C  L  *  R  R  R  M  G  V  F  E  C  V  *  T  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61644" stop="61815"/>
                    <exon start="62560" stop="63086"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>699</number_coding_nucleotides>
                  <number_encoded_amino_acids>233</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QGRMSVNAYEARFRALSRYATQLCFSPQDRIRRFVKGLRSELRISALQIAATAKSFQEMDDFDVILGMTWLSPQFAILDCNTKTVTLAKPGTDPLVWEGDYTSNPVRIVSFLRAKKMISKGCLAFLAHLKDDTTQVPSIESVSVVREFLDVFPADLPGMPPDRDIDFCIDLEPGTRPISIPPYRMAPAELRELKAQLQVLLNKGFIRPSASPWGAPVLFVKKKDGSFRMCIDY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="65918" PGL_stop="80934"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="65918" e_stop="66305"/>
            <exon e_start="80811" e_stop="80934"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.928"/>
          <exon-only e_score="0.935"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.928">
            <gDNA_exon_boundary e_start="65918" e_stop="66305" e_length="388"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="66306" i_stop="80810" i_length="14505"/>
          </intron>
          <exon e_serial="2" e_score="0.935">
            <gDNA_exon_boundary e_start="80811" e_stop="80934" e_length="124"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65918" stop="66305"/>
              <exon start="80811" stop="80934"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356257" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAACACTTAGAAAATCTAAAATTGGGTACTGAAAATCGACTCTCTGAACTTCGTGACGGAATGGCAGGACGGACCGTCACGGGCGTGACGGACCGTCATGGAGACTTCAGTGAGAATCCACTCTCTGAACTTTGCGACGACCTGCAGGACGGACCGTCGCAGGCACGATGGCCCGTCACAGGTTGCGCAAATCCCAAGCAGAATCGGATTTCCTTACACGTTTTAAGGGACGTTTTTGGACTATTCTTTCCTTAATTATAGATTTCGTGGGTTTATATTAATAACTCAAATTCTTGGGGGTTAAAAGAGGTAACCCTAAGTTAATTAGTGGGGTATTATCGCCATCTTTTATTCTTAATAATAACTAATTAGGGTAAAAGAAAGAGG : GTTTTGAAACGAGACCCTGCGACGGTCTGTCGTGCCCATGACGGTCCGTCGTGGGGTCCGTCATTTCTGCCAGTTTTTCCAGAGTTGAAGTCTGCTGCTCAAAACGACTAAACAGGTCGTTACA</gDNA_template>
            <first_frame> K  T  L  R  K  S  K  I  G  Y  *  K  S  T  L  *  T  S  *  R  N  G  R  T  D  R  H  G  R  D  G  P  S  W  R  L  Q  *  E  S  T  L  *  T  L  R  R  P  A  G  R  T  V  A  G  T  M  A  R  H  R  L  R  K  S  Q  A  E  S  D  F  L  T  R  F  K  G  R  F  W  T  I  L  S  L  I  I  D  F  V  G  L  Y  *  *  L  K  F  L  G  V  K  R  G  N  P  K  L  I  S  G  V  L  S  P  S  F  I  L  N  N  N  *  L  G  *  K  K  E   : G  F  E  T  R  P  C  D  G  L  S  C  P  *  R  S  V  V  G  S  V  I  S  A  S  F  S  R  V  E  V  C  C  S  K  R  L  N  R  S  L   </first_frame>
            <second_frame>  K  H  L  E  N  L  K  L  G  T  E  N  R  L  S  E  L  R  D  G  M  A  G  R  T  V  T  G  V  T  D  R  H  G  D  F  S  E  N  P  L  S  E  L  C  D  D  L  Q  D  G  P  S  Q  A  R  W  P  V  T  G  C  A  N  P  K  Q  N  R  I  S  L  H  V  L  R  D  V  F  G  L  F  F  P  *  L  *  I  S  W  V  Y  I  N  N  S  N  S  W  G  L  K  E  V  T  L  S  *  L  V  G  Y  Y  R  H  L  L  F  L  I  I  T  N  *  G  K  R  K  R  :  V  L  K  R  D  P  A  T  V  C  R  A  H  D  G  P  S  W  G  P  S  F  L  P  V  F  P  E  L  K  S  A  A  Q  N  D  *  T  G  R  Y  </second_frame>
            <third_frame>   N  T  *  K  I  *  N  W  V  L  K  I  D  S  L  N  F  V  T  E  W  Q  D  G  P  S  R  A  *  R  T  V  M  E  T  S  V  R  I  H  S  L  N  F  A  T  T  C  R  T  D  R  R  R  H  D  G  P  S  Q  V  A  Q  I  P  S  R  I  G  F  P  Y  T  F  *  G  T  F  L  D  Y  S  F  L  N  Y  R  F  R  G  F  I  L  I  T  Q  I  L  G  G  *  K  R  *  P  *  V  N  *  W  G  I  I  A  I  F  Y  S  *  *  *  L  I  R  V  K  E  R  G :   F  *  N  E  T  L  R  R  S  V  V  P  M  T  V  R  R  G  V  R  H  F  C  Q  F  F  Q  S  *  S  L  L  L  K  T  T  K  Q  V  V  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="65919" stop="66173"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>252</number_coding_nucleotides>
                  <number_encoded_amino_acids>84</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KHLENLKLGTENRLSELRDGMAGRTVTGVTDRHGDFSENPLSELCDDLQDGPSQARWPVTGCANPKQNRISLHVLRDVFGLFFP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="79750" PGL_stop="79273"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="79750" e_stop="79273"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.925"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.925">
            <gDNA_exon_boundary e_start="79750" e_stop="79273" e_length="478"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79750" stop="79273"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246710" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CACGAACCGACACGTAGATTTAGGAGATCGGAGTGTCACTTACCGACACAAAAGGATTAATGAATATGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAATGAACATCATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTAATGGTATTTGTTAATGATATAGTGCTTGTTGTTGCTACATGTTGAGTATCATAGTTGATTTTATGATATTACTTGGTATATATCGATTTCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTTTCTTCTTGTTTATTTGTAGAGTGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCTAGTCGGTCTTCATTACTCCGGATATCAGGGTGAGCTAATGCTTCTAGCTTGGACT</gDNA_template>
            <first_frame> H  E  P  T  R  R  F  R  R  S  E  C  H  L  P  T  Q  K  D  *  *  I  *  G  S  G  V  S  R  T  D  T  R  E  I  K  I  M  N  L  E  R  C  *  Y  T  Q  S  N  E  H  H  S  Q  M  S  M  V  L  R  L  E  S  S  C  V  N  L  M  V  F  V  N  D  I  V  L  V  V  A  T  C  *  V  S  *  L  I  L  *  Y  Y  L  V  Y  I  D  F  Y  F  E  L  A  D  D  I  Y  S  V  P  V  F  C  T  D  P  Y  F  Y  V  F  F  L  F  I  C  R  V  Q  Q  T  C  R  H  L  R  L  N  S  N  S  S  R  S  S  L  L  R  I  S  G  *  A  N  A  S  S  L  D  </first_frame>
            <second_frame>  T  N  R  H  V  D  L  G  D  R  S  V  T  Y  R  H  K  R  I  N  E  Y  E  G  A  E  C  H  V  P  T  Q  E  K  *  R  *  *  I  L  K  D  V  N  I  L  N  L  M  N  I  I  P  K  *  V  W  Y  *  G  L  S  P  H  V  *  T  *  W  Y  L  L  M  I  *  C  L  L  L  L  H  V  E  Y  H  S  *  F  Y  D  I  T  W  Y  I  S  I  S  I  L  S  W  P  M  I  S  T  Q  Y  P  C  F  V  L  T  P  T  F  M  F  S  S  C  L  F  V  E  C  S  K  R  A  V  I  F  D  S  T  V  T  L  V  G  L  H  Y  S  G  Y  Q  G  E  L  M  L  L  A  W  T </second_frame>
            <third_frame>   R  T  D  T  *  I  *  E  I  G  V  S  L  T  D  T  K  G  L  M  N  M  R  E  R  S  V  T  Y  R  H  K  R  N  K  D  N  E  S  *  K  M  L  I  Y  S  I  *  *  T  S  F  P  N  E  Y  G  I  E  A  *  V  L  M  C  E  L  N  G  I  C  *  *  Y  S  A  C  C  C  Y  M  L  S  I  I  V  D  F  M  I  L  L  G  I  Y  R  F  L  F  *  V  G  R  *  Y  L  L  S  T  R  V  L  Y  *  P  L  L  L  C  F  L  L  V  Y  L  *  S  A  A  N  V  P  S  S  S  T  Q  Q  *  L  *  S  V  F  I  T  P  D  I  R  V  S  *  C  F  *  L  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79488" stop="79273"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FYDITWYISISILSWPMISTQYPCFVLTPTFMFSSCLFVECSKRAVIFDSTVTLVGLHYSGYQGELMLLAWT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="83074" PGL_stop="85712"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="83074" e_stop="85712"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.944"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.944">
            <gDNA_exon_boundary e_start="83074" e_stop="85712" e_length="2639"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83074" stop="83786"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379315" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83074" stop="83669"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83074" stop="83599"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204434" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83145" stop="83824"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368762" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83145" stop="83503"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240817" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83594" stop="84253"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355232" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83663" stop="84425"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355244" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83663" stop="84324"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351414" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84274" stop="84830"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244046" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84278" stop="85039"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214046" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84358" stop="85145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356912" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84360" stop="84891"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353805" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84434" stop="85129"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356209" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84993" stop="85712"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356614" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84996" stop="85659"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352401" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAATCCCTTGACAAATCGGTGGTAGTAGCTCGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTTTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGAATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCCTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCGTCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCGTTCATCAGACTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGCGGTCTTTGGCACATCTGTTGCCCGTATTTTCAATTGATGATAGTCGAATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTATTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTTTATAAGGGGGTATAGAAATGGGGCGAGTACCCGGTTCAAGATCAATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGGACCAACGAAACTGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCATTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACGTACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGTATCTGTCCCAGGCTTGGATAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATATACATAAGTGTTGCTCCCCCACAAAGTTCACCAAACACGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGACATATCAAGTAATTCACAATGTAAATTTAGATCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATTGTTTGTCTTTCCATTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGTTTGCCCATCACCTCGACCATTTTGGTGACCACCATTACCTCGACCACCACGTGCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCCATTGGGGGTCTATAACTCTGTTTTGGACAATTTCTCCTAATATGTCCAATCTCCCCACATCCATAACACTCTAGAGTCAAGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCATCTACAGTTTGCAGTGAAGACTAAATGGGTCGAACTGAGTAACCTCCGGAACCCTGTCCTCTAGAGTAAGAACCATTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTCGATGCCATGGTGAATTCATCTGGCTTCACTCCTTCCACCTCTACCACGAAATCTACTACTTCTTGGAAGGATTTTGCCGTAGCCGCTACATGTAAGGCTGAAATCCGCAACTCTGACCTCAACCCCTTCACAAAACGACGAATCCGCTCTTGTGGACTGAAACAAAGTTGGGTGGCATATCTAGATAGTGCATAAAACTTAGCCTCATATGCATTGACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAGCTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTCCGTTGGTTGACACTCAACATGTGACCGCCACCACATTTTGGCGTTCCCTTGAAACTGATAACTCACGAACTCAACACCAAACCGTTCTACTATGCCCATCTTTTGTAGTAGCTCATGACAGTCAACCAGAAAATCGTAAGCATCCTCAGATTCAGCACCCTTGAAGACTGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTTATGCTGATCATTTGTCATTATAGGCCTAGTAGTCAGACGTGGAAACGTGCCTATGTCCAATGAGGCATCCATACAAGGAGCCATAGTGGCTGCATGTTGTACCTCTGAAACCGGGGGTGTTGGTGCAGAAAACACTGGAAGGGCCTGACCCTGATCAGACAACCCACTAAGATAAGCGAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCAATTCCTCATTTTGCACTTGTTTATTCTCCCCTTCCTCACCCTCTCTTACCACTTCCTTAGTCGGTGGAGGAGTCACCGCCCTAGTATCAGACGGGCT</gDNA_template>
            <first_frame> E  S  L  D  K  S  V  V  V  A  R  *  P  N  K  A  P  Y  F  *  H  I  S  R  S  Y  P  I  F  H  C  L  N  L  R  R  I  H  H  H  S  I  L  R  N  H  V  P  Q  E  G  H  C  I  *  P  K  L  T  L  R  E  L  G  I  K  L  F  L  P  Q  H  F  Q  Y  H  S  Q  M  L  L  M  F  L  L  T  F  R  V  Y  Q  Y  I  V  N  K  Y  D  H  K  E  I  Q  I  W  L  K  N  P  V  H  Q  T  H  E  R  S  R  G  I  R  K  T  K  R  H  H  Y  K  F  V  M  P  I  P  G  S  K  S  G  L  W  H  I  C  C  P  Y  F  Q  L  M  I  V  E  S  Q  V  N  L  R  E  D  T  S  T  L  *  L  I  E  Q  V  I  N  A  R  K  R  I  L  V  L  Y  G  Y  L  I  Q  L  P  V  V  Y  A  H  P  K  T  P  I  L  L  L  Y  K  Q  N  R  S  T  P  R  R  C  T  W  S  N  E  A  F  A  Q  Q  L  L  K  L  G  F  *  L  S  *  L  R  G  S  H  F  I  R  G  Y  R  N  G  A  S  T  R  F  K  I  N  T  E  V  N  I  P  I  W  W  H  T  R  K  I  C  R  E  H  I  Q  K  L  T  D  Q  R  N  *  L  N  R  R  Y  L  G  S  V  I  L  E  M  C  Q  E  S  *  T  P  F  T  N  H  F  L  S  T  K  K  G  D  D  T  Y  R  I  G  S  V  V  T  L  P  H  *  R  I  C  P  R  L  G  *  R  H  R  F  S  I  T  I  Q  D  R  K  L  R  R  K  P  S  H  T  Q  N  Y  I  K  I  I  H  F  *  D  N  Q  I  Y  I  S  V  A  P  P  Q  S  S  P  N  T  T  Y  I  P  F  Q  L  P  Q  T  H  P  P  E  *  K  H  E  *  T  Y  Q  V  I  H  N  V  N  L  D  H  *  Q  M  R  K  I  H  K  K  M  W  I  Q  D  Q  T  I  Q  K  P  C  N  H  K  P  E  D  Y  L  *  *  Q  H  Q  M  P  P  L  Q  T  A  Q  G  K  R  N  N  G  P  Y  C  L  S  F  H  C  P  Y  H  V  V  M  *  W  L  Q  F  A  H  H  L  D  H  F  G  D  H  H  Y  L  D  H  H  V  L  Q  N  N  G  L  Y  H  D  H  L  Y  L  *  P  L  G  V  Y  N  S  V  L  D  N  F  S  *  Y  V  Q  S  P  H  I  H  N  T  L  E  S  S  I  G  L  S  E  K  C  *  P  V  *  G  G  P  P  S  T  V  C  S  E  D  *  M  G  R  T  E  *  P  P  E  P  C  P  L  E  *  E  P  L  N  S  P  P  F  R  N  L  F  D  V  D  A  M  V  N  S  S  G  F  T  P  S  T  S  T  T  K  S  T  T  S  W  K  D  F  A  V  A  A  T  C  K  A  E  I  R  N  S  D  L  N  P  F  T  K  R  R  I  R  S  C  G  L  K  Q  S  W  V  A  Y  L  D  S  A  *  N  L  A  S  Y  A  L  T  D  I  L  P  C  S  R  L  K  N  S  S  L  F  L  S  L  K  V  R  G  I  Y  F  S  I  N  K  L  E  N  E  A  Q  V  I  G  G  A  S  V  G  *  H  S  T  C  D  R  H  H  I  L  A  F  P  *  N  *  *  L  T  N  S  T  P  N  R  S  T  M  P  I  F  C  S  S  S  *  Q  S  T  R  K  S  *  A  S  S  D  S  A  P  L  K  T  G  G  F  N  F  K  N  L  L  K  S  L  C  *  S  F  V  I  I  G  L  V  V  R  R  G  N  V  P  M  S  N  E  A  S  I  Q  G  A  I  V  A  A  C  C  T  S  E  T  G  G  V  G  A  E  N  T  G  R  A  *  P  *  S  D  N  P  L  R  *  A  R  T  *  L  I  I  S  G  V  G  W  G  G  N  S  S  F  C  T  C  L  F  S  P  S  S  P  S  L  T  T  S  L  V  G  G  G  V  T  A  L  V  S  D  G   </first_frame>
            <second_frame>  N  P  L  T  N  R  W  *  *  L  A  N  P  T  K  L  L  I  S  D  T  L  V  G  L  T  Q  F  F  T  V  S  I  L  E  G  S  T  I  T  P  S  L  E  T  T  C  P  K  K  D  T  A  S  S  Q  N  S  H  L  E  N  L  E  *  S  F  F  S  L  N  I  S  N  T  I  L  K  C  S  S  C  S  S  L  L  L  E  Y  I  S  I  S  S  I  N  T  I  T  K  R  S  K  Y  G  L  K  I  P  F  I  R  L  M  N  A  A  G  A  F  V  R  P  K  D  I  T  T  N  S  *  C  P  Y  L  V  L  K  A  V  F  G  T  S  V  A  R  I  F  N  *  *  *  S  N  L  K  S  I  L  E  K  T  Q  A  P  C  N  *  S  N  K  S  S  M  R  G  R  G  Y  L  F  F  M  V  T  L  F  N  C  R  *  S  M  H  I  R  K  L  P  S  F  F  F  T  N  K  T  G  A  P  Q  G  D  A  L  G  L  M  K  P  L  L  N  N  S  *  S  W  A  F  N  S  L  N  S  A  G  A  I  L  *  G  G  I  E  M  G  R  V  P  G  S  R  S  I  Q  K  S  I  S  L  S  G  G  I  P  G  R  S  A  G  N  T  S  R  N  S  R  T  N  E  T  D  S  I  E  G  T  W  V  V  S  S  L  R  C  A  K  K  A  K  H  H  L  L  T  I  F  L  A  R  R  K  E  M  I  R  T  G  L  E  V  *  S  P  S  H  T  N  V  S  V  P  G  L  D  N  V  T  V  L  A  L  Q  S  K  I  A  N  C  G  E  S  Q  V  I  P  R  I  T  S  K  S  S  I  S  K  I  T  K  Y  T  *  V  L  L  P  H  K  V  H  Q  T  R  P  I  Y  L  F  N  Y  H  R  L  T  H  R  S  R  N  T  N  R  H  I  K  *  F  T  M  *  I  *  I  I  S  K  *  G  R  Y  I  R  K  C  G  S  R  I  K  Q  Y  R  S  H  A  I  T  N  Q  K  I  T  C  D  D  S  I  R  C  L  R  F  R  P  P  R  E  S  V  T  M  G  P  I  V  C  L  S  I  A  P  T  M  L  *  C  S  G  S  S  L  P  I  T  S  T  I  L  V  T  T  I  T  S  T  T  T  C  S  R  I  T  A  S  T  M  T  T  S  T  S  S  H  W  G  S  I  T  L  F  W  T  I  S  P  N  M  S  N  L  P  T  S  I  T  L  *  S  Q  A  *  V  S  Q  R  S  V  D  R  S  E  V  D  P  H  L  Q  F  A  V  K  T  K  W  V  E  L  S  N  L  R  N  P  V  L  *  S  K  N  H  *  T  H  L  P  F  E  T  S  L  M  S  M  P  W  *  I  H  L  A  S  L  L  P  P  L  P  R  N  L  L  L  L  G  R  I  L  P  *  P  L  H  V  R  L  K  S  A  T  L  T  S  T  P  S  Q  N  D  E  S  A  L  V  D  *  N  K  V  G  W  H  I  *  I  V  H  K  T  *  P  H  M  H  *  P  T  S  Y  L  A  L  G  S  R  T  H  P  F  S  Y  P  S  K  S  G  G  Y  T  S  P  *  T  S  *  R  M  R  P  K  S  *  V  V  P  P  L  V  D  T  Q  H  V  T  A  T  T  F  W  R  S  L  E  T  D  N  S  R  T  Q  H  Q  T  V  L  L  C  P  S  F  V  V  A  H  D  S  Q  P  E  N  R  K  H  P  Q  I  Q  H  P  *  R  L  E  V  S  I  S  R  T  Y  *  K  V  Y  A  D  H  L  S  L  *  A  *  *  S  D  V  E  T  C  L  C  P  M  R  H  P  Y  K  E  P  *  W  L  H  V  V  P  L  K  P  G  V  L  V  Q  K  T  L  E  G  P  D  P  D  Q  T  T  H  *  D  K  R  E  P  D  *  S  S  L  G  *  V  G  V  A  I  P  H  F  A  L  V  Y  S  P  L  P  H  P  L  L  P  L  P  *  S  V  E  E  S  P  P  *  Y  Q  T  G  </second_frame>
            <third_frame>   I  P  *  Q  I  G  G  S  S  S  L  T  Q  Q  S  S  L  F  L  T  H  *  *  V  L  P  N  F  S  L  S  Q  S  *  K  D  P  P  S  L  H  P  *  K  P  R  A  P  R  R  T  L  H  L  A  K  T  H  T  *  R  T  W  N  K  A  F  S  P  S  T  F  P  I  P  F  S  N  A  P  H  V  P  P  Y  F  *  S  I  S  V  Y  R  Q  *  I  R  S  Q  R  D  P  N  M  A  *  K  S  R  S  S  D  S  *  T  Q  Q  G  H  S  *  D  Q  K  T  S  L  Q  I  R  N  A  H  T  W  F  *  K  R  S  L  A  H  L  L  P  V  F  S  I  D  D  S  R  I  S  S  Q  S  *  R  R  H  K  H  L  V  T  D  R  T  S  H  Q  C  E  E  E  D  T  C  S  L  W  L  P  Y  S  T  A  G  S  L  C  T  S  E  N  S  H  P  S  S  L  Q  T  K  P  E  H  P  K  E  M  H  L  V  *  *  S  L  C  S  T  T  L  E  V  G  L  L  T  L  L  T  P  R  E  P  F  Y  K  G  V  *  K  W  G  E  Y  P  V  Q  D  Q  Y  R  S  Q  Y  P  Y  L  V  A  Y  Q  E  D  L  Q  G  T  H  P  E  T  H  G  P  T  K  L  T  Q  S  K  V  L  G  *  C  H  P  *  D  V  P  R  K  L  N  T  I  Y  *  P  F  S  *  H  E  E  R  R  *  Y  V  P  D  W  K  C  S  H  P  P  T  L  T  Y  L  S  Q  A  W  I  T  S  P  F  *  H  Y  N  P  R  S  Q  I  A  E  K  A  K  S  Y  P  E  L  H  Q  N  H  P  F  L  R  *  P  N  I  H  K  C  C  S  P  T  K  F  T  K  H  D  L  Y  T  F  S  T  T  T  D  S  P  T  G  V  E  T  R  I  D  I  S  S  N  S  Q  C  K  F  R  S  L  A  N  E  E  D  T  *  E  N  V  D  P  G  S  N  N  T  E  A  M  Q  S  Q  T  R  R  L  P  V  M  T  A  S  D  A  S  A  S  D  R  P  G  K  A  *  Q  W  A  L  L  F  V  F  P  L  P  L  P  C  C  D  V  V  A  P  V  C  P  S  P  R  P  F  W  *  P  P  L  P  R  P  P  R  A  P  E  *  R  P  L  P  *  P  P  L  P  L  A  I  G  G  L  *  L  C  F  G  Q  F  L  L  I  C  P  I  S  P  H  P  *  H  S  R  V  K  H  R  S  L  R  E  V  L  T  G  L  R  W  T  P  I  Y  S  L  Q  *  R  L  N  G  S  N  *  V  T  S  G  T  L  S  S  R  V  R  T  I  K  L  T  S  L  S  K  P  L  *  C  R  C  H  G  E  F  I  W  L  H  S  F  H  L  Y  H  E  I  Y  Y  F  L  E  G  F  C  R  S  R  Y  M  *  G  *  N  P  Q  L  *  P  Q  P  L  H  K  T  T  N  P  L  L  W  T  E  T  K  L  G  G  I  S  R  *  C  I  K  L  S  L  I  C  I  D  R  H  P  T  L  L  *  A  Q  E  L  I  P  F  P  I  P  Q  S  P  G  D  I  L  L  H  K  Q  A  R  E  *  G  P  S  H  R  W  C  L  R  W  L  T  L  N  M  *  P  P  P  H  F  G  V  P  L  K  L  I  T  H  E  L  N  T  K  P  F  Y  Y  A  H  L  L  *  *  L  M  T  V  N  Q  K  I  V  S  I  L  R  F  S  T  L  E  D  W  R  F  Q  F  Q  E  L  T  E  K  F  M  L  I  I  C  H  Y  R  P  S  S  Q  T  W  K  R  A  Y  V  Q  *  G  I  H  T  R  S  H  S  G  C  M  L  Y  L  *  N  R  G  C  W  C  R  K  H  W  K  G  L  T  L  I  R  Q  P  T  K  I  S  E  N  L  I  D  H  L  W  G  R  L  G  W  Q  F  L  I  L  H  L  F  I  L  P  F  L  T  L  S  Y  H  F  L  S  R  W  R  S  H  R  P  S  I  R  R  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="83239" stop="83577"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>336</number_coding_nucleotides>
                  <number_encoded_amino_acids>112</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PKLTLRELGIKLFLPQHFQYHSQMLLMFLLTFRVYQYIVNKYDHKEIQIWLKNPVHQTHERSRGIRKTKRHHYKFVMPIPGSKSGLWHICCPYFQLMIVESQVNLREDTSTL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="83801" stop="84046"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GGIEMGRVPGSRSIQKSISLSGGIPGRSAGNTSRNSRTNETDSIEGTWVVSSLRCAKKAKHHLLTIFLARRKEMIRTGLEV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="84814" stop="85050"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EPLNSPPFRNLFDVDAMVNSSGFTPSTSTTKSTTSWKDFAVAATCKAEIRNSDLNPFTKRRIRSCGLKQSWVAYLDSA*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85506" stop="85712"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NRGCWCRKHWKGLTLIRQPTKISENLIDHLWGRLGWQFLILHLFILPFLTLSYHFLSRWRSHRPSIRRA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="85089" PGL_stop="83646"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="85089" e_stop="84917"/>
            <exon e_start="84173" e_stop="83646"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.021" e_score="0.942"/>
          <exon-only e_score="0.913"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.942">
            <gDNA_exon_boundary e_start="85089" e_stop="84917" e_length="173"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.021">
            <gDNA_intron_boundary i_start="84916" i_stop="84174" i_length="743"/>
          </intron>
          <exon e_serial="2" e_score="0.913">
            <gDNA_exon_boundary e_start="84173" e_stop="83646" e_length="528"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85089" stop="84917"/>
              <exon start="84173" stop="83646"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353359" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCAAGGTAGGATGTCGGTCAATGCATATGAGGCTAAGTTTTATGCACTATCTAGATATGCCACCCAACTTTGTTTCAGTCCACAAGAGCGGATTCGTCGTTTTGTGAAGGGGTTGAGGTCAGAGTTGCGGATTTCAGCCTTACATGTAGCGGCTACGGCAAAATCCTTCCAAG : AAATGGATGATTTTGATGTAATTCTGGGTATGACTTGGCTTTCTCCGCAATTTGCGATCTTGGATTGTAATGCTAAAACGGTGACGTTATCCAAGCCTGGGACAGATACGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTACGTATCATCTCCTTTCTTCGTGCTAAGAAAATGGTTAGTAAATGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTGAGTCAGTTTCGTTGGTCCGTGAGTTTCTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCAGATAGGGATATTGACTTCTGTATTGATCTTGAACCGGGTACTCGCCCCATTTCTATACCCCCTTATAAAATGGCTCCCGCGGAGTTAAGAGAGTTAAAAGCCCAACTTCAAGAGTTGTTGAGCAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGGTTTTGTTTGTAAAGAAGAAGGATGGGAGTTTTCGGATGTGCATAGACTACC</gDNA_template>
            <first_frame> A  R  *  D  V  G  Q  C  I  *  G  *  V  L  C  T  I  *  I  C  H  P  T  L  F  Q  S  T  R  A  D  S  S  F  C  E  G  V  E  V  R  V  A  D  F  S  L  T  C  S  G  Y  G  K  I  L  P  R :   N  G  *  F  *  C  N  S  G  Y  D  L  A  F  S  A  I  C  D  L  G  L  *  C  *  N  G  D  V  I  Q  A  W  D  R  Y  V  S  V  G  G  *  L  H  F  Q  S  G  T  Y  H  L  L  S  S  C  *  E  N  G  *  *  M  V  F  S  F  L  G  T  S  Q  G  *  H  Y  P  S  T  F  D  *  V  S  F  V  G  P  *  V  S  G  C  V  P  C  R  S  S  W  Y  A  T  R  *  G  Y  *  L  L  Y  *  S  *  T  G  Y  S  P  H  F  Y  T  P  L  *  N  G  S  R  G  V  K  R  V  K  S  P  T  S  R  V  V  E  Q  R  L  H  *  T  K  C  I  S  L  G  C  S  G  F  V  C  K  E  E  G  W  E  F  S  D  V  H  R  L   </first_frame>
            <second_frame>  Q  G  R  M  S  V  N  A  Y  E  A  K  F  Y  A  L  S  R  Y  A  T  Q  L  C  F  S  P  Q  E  R  I  R  R  F  V  K  G  L  R  S  E  L  R  I  S  A  L  H  V  A  A  T  A  K  S  F  Q   : E  M  D  D  F  D  V  I  L  G  M  T  W  L  S  P  Q  F  A  I  L  D  C  N  A  K  T  V  T  L  S  K  P  G  T  D  T  L  V  W  E  G  D  Y  T  S  N  P  V  R  I  I  S  F  L  R  A  K  K  M  V  S  K  W  C  L  A  F  L  A  H  L  K  D  D  T  T  Q  V  P  S  I  E  S  V  S  L  V  R  E  F  L  D  V  F  P  A  D  L  P  G  M  P  P  D  R  D  I  D  F  C  I  D  L  E  P  G  T  R  P  I  S  I  P  P  Y  K  M  A  P  A  E  L  R  E  L  K  A  Q  L  Q  E  L  L  S  K  G  F  I  R  P  S  A  S  P  W  G  A  P  V  L  F  V  K  K  K  D  G  S  F  R  M  C  I  D  Y  </second_frame>
            <third_frame>   K  V  G  C  R  S  M  H  M  R  L  S  F  M  H  Y  L  D  M  P  P  N  F  V  S  V  H  K  S  G  F  V  V  L  *  R  G  *  G  Q  S  C  G  F  Q  P  Y  M  *  R  L  R  Q  N  P  S  K  :  K  W  M  I  L  M  *  F  W  V  *  L  G  F  L  R  N  L  R  S  W  I  V  M  L  K  R  *  R  Y  P  S  L  G  Q  I  R  *  C  G  R  V  T  T  L  P  I  R  Y  V  S  S  P  F  F  V  L  R  K  W  L  V  N  G  V  *  L  S  W  H  I  S  R  M  T  L  P  K  Y  L  R  L  S  Q  F  R  W  S  V  S  F  W  M  C  S  L  Q  I  F  L  V  C  H  Q  I  G  I  L  T  S  V  L  I  L  N  R  V  L  A  P  F  L  Y  P  L  I  K  W  L  P  R  S  *  E  S  *  K  P  N  F  K  S  C  *  A  K  A  S  L  D  Q  V  H  L  L  G  V  L  R  F  C  L  *  R  R  R  M  G  V  F  G  C  A  *  T  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85088" stop="84917"/>
                    <exon start="84173" stop="83647"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>699</number_coding_nucleotides>
                  <number_encoded_amino_acids>233</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QGRMSVNAYEAKFYALSRYATQLCFSPQERIRRFVKGLRSELRISALHVAATAKSFQEMDDFDVILGMTWLSPQFAILDCNAKTVTLSKPGTDTLVWEGDYTSNPVRIISFLRAKKMVSKWCLAFLAHLKDDTTQVPSIESVSLVREFLDVFPADLPGMPPDRDIDFCIDLEPGTRPISIPPYKMAPAELRELKAQLQELLSKGFIRPSASPWGAPVLFVKKKDGSFRMCIDY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="85716" PGL_stop="85163"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="85716" e_stop="85163"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.903"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.903">
            <gDNA_exon_boundary e_start="85716" e_stop="85163" e_length="554"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85716" stop="85163"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329287" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85511" stop="85173"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245958" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACCTAGCCCGTCTGATACTAGGGCGGTGACTCCTCCACCGACTAAGGAAGTGGTAAGAGAGGGTGAGGAAGGGGAGAATAAACAAGTGCAAAATGAGGAATTGCCACCCCAACCTACCCCAGAGATGATCAATCAGGTTCTCGCTTATCTTAGTGGGTTGTCTGATCAGGGTCAGGCCCTTCCAGTGTTTTCTGCACCAACACCCCCGGTTTCAGAGGTACAACATGCAGCCACTATGGCTCCTTGTATGGATGCCTCATTGGACATAGGCACGTTTCCACGTCTGACTACTAGGCCTATAATGACAAATGATCAGCATAAACTTTTCAGTAAGTTCTTGAAATTGAAACCTCCAGTCTTCAAGGGTGCTGAATCTGAGGATGCTTACGATTTTCTGGTTGACTGTCATGAGCTACTACAAAAGATGGGCATAGTAGAACGGTTTGGTGTTGAGTTCGTGAGTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACGGAGGCACCACCTATGACTTGGGCCTCATTCT</gDNA_template>
            <first_frame> T  *  P  V  *  Y  *  G  G  D  S  S  T  D  *  G  S  G  K  R  G  *  G  R  G  E  *  T  S  A  K  *  G  I  A  T  P  T  Y  P  R  D  D  Q  S  G  S  R  L  S  *  W  V  V  *  S  G  S  G  P  S  S  V  F  C  T  N  T  P  G  F  R  G  T  T  C  S  H  Y  G  S  L  Y  G  C  L  I  G  H  R  H  V  S  T  S  D  Y  *  A  Y  N  D  K  *  S  A  *  T  F  Q  *  V  L  E  I  E  T  S  S  L  Q  G  C  *  I  *  G  C  L  R  F  S  G  *  L  S  *  A  T  T  K  D  G  H  S  R  T  V  W  C  *  V  R  E  L  S  V  S  R  E  R  Q  N  V  V  A  V  T  C  *  V  S  T  N  G  G  T  T  Y  D  L  G  L  I   </first_frame>
            <second_frame>  P  S  P  S  D  T  R  A  V  T  P  P  P  T  K  E  V  V  R  E  G  E  E  G  E  N  K  Q  V  Q  N  E  E  L  P  P  Q  P  T  P  E  M  I  N  Q  V  L  A  Y  L  S  G  L  S  D  Q  G  Q  A  L  P  V  F  S  A  P  T  P  P  V  S  E  V  Q  H  A  A  T  M  A  P  C  M  D  A  S  L  D  I  G  T  F  P  R  L  T  T  R  P  I  M  T  N  D  Q  H  K  L  F  S  K  F  L  K  L  K  P  P  V  F  K  G  A  E  S  E  D  A  Y  D  F  L  V  D  C  H  E  L  L  Q  K  M  G  I  V  E  R  F  G  V  E  F  V  S  Y  Q  F  Q  G  N  A  K  M  W  W  R  S  H  V  E  C  Q  P  T  E  A  P  P  M  T  W  A  S  F  </second_frame>
            <third_frame>   L  A  R  L  I  L  G  R  *  L  L  H  R  L  R  K  W  *  E  R  V  R  K  G  R  I  N  K  C  K  M  R  N  C  H  P  N  L  P  Q  R  *  S  I  R  F  S  L  I  L  V  G  C  L  I  R  V  R  P  F  Q  C  F  L  H  Q  H  P  R  F  Q  R  Y  N  M  Q  P  L  W  L  L  V  W  M  P  H  W  T  *  A  R  F  H  V  *  L  L  G  L  *  *  Q  M  I  S  I  N  F  S  V  S  S  *  N  *  N  L  Q  S  S  R  V  L  N  L  R  M  L  T  I  F  W  L  T  V  M  S  Y  Y  K  R  W  A  *  *  N  G  L  V  L  S  S  *  V  I  S  F  K  G  T  P  K  C  G  G  G  H  M  L  S  V  N  Q  R  R  H  H  L  *  L  G  P  H  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85715" stop="85164"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>552</number_coding_nucleotides>
                  <number_encoded_amino_acids>184</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PSPSDTRAVTPPPTKEVVREGEEGENKQVQNEELPPQPTPEMINQVLAYLSGLSDQGQALPVFSAPTPPVSEVQHAATMAPCMDASLDIGTFPRLTTRPIMTNDQHKLFSKFLKLKPPVFKGAESEDAYDFLVDCHELLQKMGIVERFGVEFVSYQFQGNAKMWWRSHVECQPTEAPPMTWASF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="86068" PGL_stop="85783"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="86068" e_stop="85783"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.902"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.902">
            <gDNA_exon_boundary e_start="86068" e_stop="85783" e_length="286"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86068" stop="85783"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355114" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTGGTTCGTTGGTCTCATCACACAAGAACGAGTCTGGTAGAGTCTTAAGGAACGGTAGGGGGACACCTTTACTTTTCTTTGAGGGGCTATAAGACTTTAGGAAAATTCCATTCTTTCATTCTTTCTTTCGTGCTATTACTTGGGTCCAATTGGTATCTAGGTGATACAAATTGGTATCTGACCATCTTCACTCTTTTTCGCAGATGGTTAGAACTAGAGCAATAATTGCGCCAACACCAACATCGGCAAGACAAGAAGCGTCCGAGCCAGCCACTGGGGCTGTAG</gDNA_template>
            <first_frame> F  G  S  L  V  S  S  H  K  N  E  S  G  R  V  L  R  N  G  R  G  T  P  L  L  F  F  E  G  L  *  D  F  R  K  I  P  F  F  H  S  F  F  R  A  I  T  W  V  Q  L  V  S  R  *  Y  K  L  V  S  D  H  L  H  S  F  S  Q  M  V  R  T  R  A  I  I  A  P  T  P  T  S  A  R  Q  E  A  S  E  P  A  T  G  A  V  </first_frame>
            <second_frame>  L  V  R  W  S  H  H  T  R  T  S  L  V  E  S  *  G  T  V  G  G  H  L  Y  F  S  L  R  G  Y  K  T  L  G  K  F  H  S  F  I  L  S  F  V  L  L  L  G  S  N  W  Y  L  G  D  T  N  W  Y  L  T  I  F  T  L  F  R  R  W  L  E  L  E  Q  *  L  R  Q  H  Q  H  R  Q  D  K  K  R  P  S  Q  P  L  G  L  * </second_frame>
            <third_frame>   W  F  V  G  L  I  T  Q  E  R  V  W  *  S  L  K  E  R  *  G  D  T  F  T  F  L  *  G  A  I  R  L  *  E  N  S  I  L  S  F  F  L  S  C  Y  Y  L  G  P  I  G  I  *  V  I  Q  I  G  I  *  P  S  S  L  F  F  A  D  G  *  N  *  S  N  N  C  A  N  T  N  I  G  K  T  R  S  V  R  A  S  H  W  G  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0284C08.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="87996" PGL_stop="86621"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="87996" e_stop="86621"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.923"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.923">
            <gDNA_exon_boundary e_start="87996" e_stop="86621" e_length="1376"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87996" stop="87337"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349296" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87421" stop="86709"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87421" stop="87019"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357559" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86858" stop="86621"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391780" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAAAAACTGGCAGAAATGACGGACCCCACGACGGACCATCATGGGCACGACGGACCGTCGCAGGGTCTCATTTCAAAACACTTAGGAAATCTGAAATTGGGTACTGAAAATCGACTCTCTGAACTTCGTAACGGAATGGCAAGACGGACCGTCACAGGCGTGATGGACCATCACAGAGTCTTCAGTGAAAATCCAGTCTCTGAACCTTGCGACGACCTGCAGGACGGACCGTCGCAGGCACAACGGGCTGTCACAGGCTGCGTAAATCCCAGTCTGAGTCGGAATTCCTCAATTGTTTTAAGGGACGTTTTTGACTATTCCTGCTTTAATTATAAAGTTAGTGGGTTAATGTTAATAAGTCTAATTACTTGGGGGTTAAAAGAGGTAACCTTAAGTTAATTAGTGGGTTATTATTGCCATATTTTATTCTTAATTATATACTAATTAGGGTAAAAGAAAGAGGGTTTGAATAAAGAAAATAGAAAGAACAAGAGAAAGAGAGAGAAAGTCGAACGAGAAAGAGGATCGAACGAGAGGAAAAAACACAAAGCTTGGGAAATCACTTGCTTGATCACGAATCTTCGGTGGAGGTAGGTTATGGTTTCTCTTACGATATTCGTAGTAAGCTCTTAATAGCGAATAATATGTATTGATAATATTGTAAACCCTTCTATGTGCTTAATTGTGTGCTTGCATGAATGTAATTATATAATTGTGATTATATAAGCATGATGAATTTATTGAATCCCAAATCTTGCAAAACCCTGATCTCTTTGTTAATGATGAGGCCTTAGTATAAAGAAGGCGTGATGAACTAAAATAATGAGATTGATGATGCCTTGGTAAGAAAGAAGGCTTGATGAATTGGTAGAAGGAGATTAGGGGATCGGGTGTCACGAACTGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACGTATATTTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAGCCGACACGTAGATTTAGGGGATCAGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCAACACGTAAATTTAGGGGAACGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGAGTGTCACGTACCGACACAAGAGGATTAATGAATATGAGGGAGCGGAGTGTCACGTACCAACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAATGAGTATCATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTAACGGTATTTGTTAATGATATAGTGCTTGTTGTT</gDNA_template>
            <first_frame> E  K  L  A  E  M  T  D  P  T  T  D  H  H  G  H  D  G  P  S  Q  G  L  I  S  K  H  L  G  N  L  K  L  G  T  E  N  R  L  S  E  L  R  N  G  M  A  R  R  T  V  T  G  V  M  D  H  H  R  V  F  S  E  N  P  V  S  E  P  C  D  D  L  Q  D  G  P  S  Q  A  Q  R  A  V  T  G  C  V  N  P  S  L  S  R  N  S  S  I  V  L  R  D  V  F  D  Y  S  C  F  N  Y  K  V  S  G  L  M  L  I  S  L  I  T  W  G  L  K  E  V  T  L  S  *  L  V  G  Y  Y  C  H  I  L  F  L  I  I  Y  *  L  G  *  K  K  E  G  L  N  K  E  N  R  K  N  K  R  K  R  E  K  V  E  R  E  R  G  S  N  E  R  K  K  H  K  A  W  E  I  T  C  L  I  T  N  L  R  W  R  *  V  M  V  S  L  T  I  F  V  V  S  S  *  *  R  I  I  C  I  D  N  I  V  N  P  S  M  C  L  I  V  C  L  H  E  C  N  Y  I  I  V  I  I  *  A  *  *  I  Y  *  I  P  N  L  A  K  P  *  S  L  C  *  *  *  G  L  S  I  K  K  A  *  *  T  K  I  M  R  L  M  M  P  W  *  E  R  R  L  D  E  L  V  E  G  D  *  G  I  G  C  H  E  L  T  R  R  F  R  G  S  G  V  T  N  R  H  V  D  L  G  D  R  V  S  R  T  D  T  Y  I  *  G  I  G  C  H  E  P  T  R  R  F  R  G  S  G  V  T  S  R  H  V  D  L  G  D  Q  V  S  R  T  D  T  *  I  *  G  I  G  C  H  E  P  T  R  K  F  R  G  T  G  V  T  N  R  H  V  D  L  G  D  R  S  V  T  Y  R  H  K  R  I  N  E  Y  E  G  A  E  C  H  V  P  T  Q  E  K  *  R  *  *  I  L  K  D  V  N  I  L  N  L  M  S  I  I  P  K  *  V  W  Y  *  G  L  S  P  H  V  *  T  *  R  Y  L  L  M  I  *  C  L  L   </first_frame>
            <second_frame>  K  N  W  Q  K  *  R  T  P  R  R  T  I  M  G  T  T  D  R  R  R  V  S  F  Q  N  T  *  E  I  *  N  W  V  L  K  I  D  S  L  N  F  V  T  E  W  Q  D  G  P  S  Q  A  *  W  T  I  T  E  S  S  V  K  I  Q  S  L  N  L  A  T  T  C  R  T  D  R  R  R  H  N  G  L  S  Q  A  A  *  I  P  V  *  V  G  I  P  Q  L  F  *  G  T  F  L  T  I  P  A  L  I  I  K  L  V  G  *  C  *  *  V  *  L  L  G  G  *  K  R  *  P  *  V  N  *  W  V  I  I  A  I  F  Y  S  *  L  Y  T  N  *  G  K  R  K  R  V  *  I  K  K  I  E  R  T  R  E  R  E  R  K  S  N  E  K  E  D  R  T  R  G  K  N  T  K  L  G  K  S  L  A  *  S  R  I  F  G  G  G  R  L  W  F  L  L  R  Y  S  *  *  A  L  N  S  E  *  Y  V  L  I  I  L  *  T  L  L  C  A  *  L  C  A  C  M  N  V  I  I  *  L  *  L  Y  K  H  D  E  F  I  E  S  Q  I  L  Q  N  P  D  L  F  V  N  D  E  A  L  V  *  R  R  R  D  E  L  K  *  *  D  *  *  C  L  G  K  K  E  G  L  M  N  W  *  K  E  I  R  G  S  G  V  T  N  *  H  V  D  L  G  D  R  V  S  R  T  D  T  *  I  *  G  I  G  C  H  E  P  T  R  I  F  R  G  S  G  V  T  N  R  H  V  D  L  G  D  R  V  S  R  A  D  T  *  I  *  G  I  R  C  H  E  P  T  R  R  F  R  G  S  G  V  T  N  Q  H  V  N  L  G  E  R  V  S  R  T  D  T  *  I  *  G  I  G  V  S  R  T  D  T  R  G  L  M  N  M  R  E  R  S  V  T  Y  Q  H  K  R  N  K  D  N  E  S  *  K  M  L  I  Y  S  I  *  *  V  S  F  P  N  E  Y  G  I  E  A  *  V  L  M  C  E  L  N  G  I  C  *  *  Y  S  A  C  C  </second_frame>
            <third_frame>   K  T  G  R  N  D  G  P  H  D  G  P  S  W  A  R  R  T  V  A  G  S  H  F  K  T  L  R  K  S  E  I  G  Y  *  K  S  T  L  *  T  S  *  R  N  G  K  T  D  R  H  R  R  D  G  P  S  Q  S  L  Q  *  K  S  S  L  *  T  L  R  R  P  A  G  R  T  V  A  G  T  T  G  C  H  R  L  R  K  S  Q  S  E  S  E  F  L  N  C  F  K  G  R  F  *  L  F  L  L  *  L  *  S  *  W  V  N  V  N  K  S  N  Y  L  G  V  K  R  G  N  L  K  L  I  S  G  L  L  L  P  Y  F  I  L  N  Y  I  L  I  R  V  K  E  R  G  F  E  *  R  K  *  K  E  Q  E  K  E  R  E  S  R  T  R  K  R  I  E  R  E  E  K  T  Q  S  L  G  N  H  L  L  D  H  E  S  S  V  E  V  G  Y  G  F  S  Y  D  I  R  S  K  L  L  I  A  N  N  M  Y  *  *  Y  C  K  P  F  Y  V  L  N  C  V  L  A  *  M  *  L  Y  N  C  D  Y  I  S  M  M  N  L  L  N  P  K  S  C  K  T  L  I  S  L  L  M  M  R  P  *  Y  K  E  G  V  M  N  *  N  N  E  I  D  D  A  L  V  R  K  K  A  *  *  I  G  R  R  R  L  G  D  R  V  S  R  T  D  T  *  I  *  G  I  G  C  H  E  P  T  R  R  F  R  G  S  G  V  T  N  R  H  V  Y  L  G  D  R  V  S  R  T  D  T  *  I  *  G  I  G  C  H  E  P  T  R  R  F  R  G  S  G  V  T  N  R  H  V  D  L  G  D  R  V  S  R  T  N  T  *  I  *  G  N  G  C  H  E  P  T  R  R  F  R  G  S  E  C  H  V  P  T  Q  E  D  *  *  I  *  G  S  G  V  S  R  T  N  T  R  E  I  K  I  M  N  L  E  R  C  *  Y  T  Q  S  N  E  Y  H  S  Q  M  S  M  V  L  R  L  E  S  S  C  V  N  L  T  V  F  V  N  D  I  V  L  V  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="87996" stop="87598"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>396</number_coding_nucleotides>
                  <number_encoded_amino_acids>132</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EKLAEMTDPTTDHHGHDGPSQGLISKHLGNLKLGTENRLSELRNGMARRTVTGVMDHHRVFSENPVSEPCDDLQDGPSQAQRAVTGCVNPSLSRNSSIVLRDVFDYSCFNYKVSGLMLISLITWGLKEVTLS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="98260" PGL_stop="99220"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="98260" e_stop="98747"/>
            <exon e_start="98799" e_stop="98888"/>
            <exon e_start="98986" e_stop="99220"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.543" e_score="0.986"/>
          <exon-intron don_prob="0.986" acc_prob="0.914" e_score="0.989"/>
          <exon-only e_score="0.940"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.986">
            <gDNA_exon_boundary e_start="98260" e_stop="98747" e_length="488"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.543">
            <gDNA_intron_boundary i_start="98748" i_stop="98798" i_length="51"/>
          </intron>
          <exon e_serial="2" e_score="0.989">
            <gDNA_exon_boundary e_start="98799" e_stop="98888" e_length="90"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.914">
            <gDNA_intron_boundary i_start="98889" i_stop="98985" i_length="97"/>
          </intron>
          <exon e_serial="3" e_score="0.940">
            <gDNA_exon_boundary e_start="98986" e_stop="99220" e_length="235"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98260" stop="98747"/>
              <exon start="98799" stop="98888"/>
              <exon start="98986" stop="99183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E543256" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98478" stop="98747"/>
              <exon start="98799" stop="98888"/>
              <exon start="98986" stop="99220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E299669" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGAAATCCCCAAAAAGCTCTTTACATGTACCATCTTCATCCACTTCATCTGGCAATTCATCAAGTATATCTAGTGTGAGTGGTTGTGGCAACTTTGTAAATAGAGGAAGATTGAGAACGAAACAACAATTTGAGAAGCATAAAGAAGTTAGTGGAAGTTCAAGTAATAAATCAGAATTGGAAAGATATCTTGCGGAAGATATTGAGCTAGATAGTGATGACTTTGATATATTAATGTGGTGGAAAGTTAAATGAGCCGAGATTTCCTATTCTCGCGGAGATGGTTCGTGATGTGTTAGCACTTCCCATTTCAAGTGTCGCATCGGAATGTGCATTCAGCACAGGAGGTTGTGTTCTTGATCCCTTTAGGAGTTCATTAACTCCTAAAATTGTGCAATCTCTTATTTGTGTTCAAGATTGGCTTAGAAGTGAGTCTTTTCCAATCAATATTGAGGAAGATTTAGAGTATCTTGAACAACTTGAACTTG : ATTTTGCTTTTAGTGGGACTGAATCTAGTATAATTGATATATAGTTGCAGCTTGTAAGTTCAACTATCAACTAGTGATGTGCGGTAACGA : GTCCATCAATGTTTTGTTATTTTCTTGGTTGCTATCGGCTAGAACTTGGAAGCTATTGCAATGGAGGTTGCAAGTTGCAATGATGTTTTGTTGGTTTTCTAAATCTCTTTGTTGCTGGAAGTTGCAATGAGCCAGATAATGATGACTTTAGTTTGTAACTAACTCTATTTTAGTGATGGACACAAGTTTGTTGAACTTTCTTCTAGTGTTGTTGTGATGTTGTCTTGAGTCTTGA</gDNA_template>
            <first_frame> K  K  S  P  K  S  S  L  H  V  P  S  S  S  T  S  S  G  N  S  S  S  I  S  S  V  S  G  C  G  N  F  V  N  R  G  R  L  R  T  K  Q  Q  F  E  K  H  K  E  V  S  G  S  S  S  N  K  S  E  L  E  R  Y  L  A  E  D  I  E  L  D  S  D  D  F  D  I  L  M  W  W  K  V  K  *  A  E  I  S  Y  S  R  G  D  G  S  *  C  V  S  T  S  H  F  K  C  R  I  G  M  C  I  Q  H  R  R  L  C  S  *  S  L  *  E  F  I  N  S  *  N  C  A  I  S  Y  L  C  S  R  L  A  *  K  *  V  F  S  N  Q  Y  *  G  R  F  R  V  S  *  T  T  *  T  * :   F  C  F  *  W  D  *  I  *  Y  N  *  Y  I  V  A  A  C  K  F  N  Y  Q  L  V  M  C  G  N  E :   S  I  N  V  L  L  F  S  W  L  L  S  A  R  T  W  K  L  L  Q  W  R  L  Q  V  A  M  M  F  C  W  F  S  K  S  L  C  C  W  K  L  Q  *  A  R  *  *  *  L  *  F  V  T  N  S  I  L  V  M  D  T  S  L  L  N  F  L  L  V  L  L  *  C  C  L  E  S  * </first_frame>
            <second_frame>  R  N  P  Q  K  A  L  Y  M  Y  H  L  H  P  L  H  L  A  I  H  Q  V  Y  L  V  *  V  V  V  A  T  L  *  I  E  E  D  *  E  R  N  N  N  L  R  S  I  K  K  L  V  E  V  Q  V  I  N  Q  N  W  K  D  I  L  R  K  I  L  S  *  I  V  M  T  L  I  Y  *  C  G  G  K  L  N  E  P  R  F  P  I  L  A  E  M  V  R  D  V  L  A  L  P  I  S  S  V  A  S  E  C  A  F  S  T  G  G  C  V  L  D  P  F  R  S  S  L  T  P  K  I  V  Q  S  L  I  C  V  Q  D  W  L  R  S  E  S  F  P  I  N  I  E  E  D  L  E  Y  L  E  Q  L  E  L   : D  F  A  F  S  G  T  E  S  S  I  I  D  I  *  L  Q  L  V  S  S  T  I  N  *  *  C  A  V  T   : S  P  S  M  F  C  Y  F  L  G  C  Y  R  L  E  L  G  S  Y  C  N  G  G  C  K  L  Q  *  C  F  V  G  F  L  N  L  F  V  A  G  S  C  N  E  P  D  N  D  D  F  S  L  *  L  T  L  F  *  *  W  T  Q  V  C  *  T  F  F  *  C  C  C  D  V  V  L  S  L   </second_frame>
            <third_frame>   E  I  P  K  K  L  F  T  C  T  I  F  I  H  F  I  W  Q  F  I  K  Y  I  *  C  E  W  L  W  Q  L  C  K  *  R  K  I  E  N  E  T  T  I  *  E  A  *  R  S  *  W  K  F  K  *  *  I  R  I  G  K  I  S  C  G  R  Y  *  A  R  *  *  *  L  *  Y  I  N  V  V  E  S  *  M  S  R  D  F  L  F  S  R  R  W  F  V  M  C  *  H  F  P  F  Q  V  S  H  R  N  V  H  S  A  Q  E  V  V  F  L  I  P  L  G  V  H  *  L  L  K  L  C  N  L  L  F  V  F  K  I  G  L  E  V  S  L  F  Q  S  I  L  R  K  I  *  S  I  L  N  N  L  N  L  :  I  L  L  L  V  G  L  N  L  V  *  L  I  Y  S  C  S  L  *  V  Q  L  S  T  S  D  V  R  *  R  :  V  H  Q  C  F  V  I  F  L  V  A  I  G  *  N  L  E  A  I  A  M  E  V  A  S  C  N  D  V  L  L  V  F  *  I  S  L  L  L  E  V  A  M  S  Q  I  M  M  T  L  V  C  N  *  L  Y  F  S  D  G  H  K  F  V  E  L  S  S  S  V  V  V  M  L  S  *  V  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="98495" stop="98747"/>
                    <exon start="98799" stop="98842"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>294</number_coding_nucleotides>
                  <number_encoded_amino_acids>98</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CGGKLNEPRFPILAEMVRDVLALPISSVASECAFSTGGCVLDPFRSSLTPKIVQSLICVQDWLRSESFPINIEEDLEYLEQLELDFAFSGTESSIIDI*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="98260" stop="98514"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>252</number_coding_nucleotides>
                  <number_encoded_amino_acids>84</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKSPKSSLHVPSSSTSSGNSSSISSVSGCGNFVNRGRLRTKQQFEKHKEVSGSSSNKSELERYLAEDIELDSDDFDILMWWKVK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="-" PGL_start="101857" PGL_stop="101117"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="101857" e_stop="101117"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.910"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.910">
            <gDNA_exon_boundary e_start="101857" e_stop="101117" e_length="741"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101857" stop="101117"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707410" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGATTTGATACAGGTACCACCTCACAAACTTAACGCCATGAGTTCACCTTGGCCCTTTGTAGCTTGGGGAATGGATGTCATCGGTCCTATAGAGCCAGCCGCTTCTAATGGGCACAGATTCATTCTAGTCGCCATTGATTATTTCACCAAATGGGTGGAGGCGGCTTCTTACAAGTCGGTAACCAAGAAAGTGGTGGCCGATTTTGTCCGCAACAATCTGATATGCAGATTTAGAGTTCCTGAATCCATCATTACTGATAACGACGCAAATCTCAACAGTCATTTGATGAAAGAGATATGTGAACAATTTAAGATTATTCATCGAAAGTCAACTGCCTATCGCCCCCAAATGAACGGAGTTGTAGAGGCCGCCAACAAGAATATCAAAAAGATTTTGAGGAAAATGATTGACAAACAGCGAGGTTGGCATGAAATGTTACCATATGCTTTACTAGGTTATCGAACGACGGTCAGAACATCGACTGGGCTACTCCATACTTGCTAGTATATGGAACAGAGACAGTCTTACCTGTTGAGGTCGAGATACCATAGTTGAGGATCATCCAAGAAGCTGAATTAAGTAACGCCGAATGGGTTAATAAATGGATTGATCAACTGGCTTTGATTGATGAGAAGAGAATGGTCGCCGTTTGCCATGGCCCAGTTGTATAGACAGAGAATGACTCGCGCTTTTCACAAAAGAGTAAGAGCCAGAAATTTTGAAGTTGGTCAGTTGGTTCT</gDNA_template>
            <first_frame> R  F  D  T  G  T  T  S  Q  T  *  R  H  E  F  T  L  A  L  C  S  L  G  N  G  C  H  R  S  Y  R  A  S  R  F  *  W  A  Q  I  H  S  S  R  H  *  L  F  H  Q  M  G  G  G  G  F  L  Q  V  G  N  Q  E  S  G  G  R  F  C  P  Q  Q  S  D  M  Q  I  *  S  S  *  I  H  H  Y  *  *  R  R  K  S  Q  Q  S  F  D  E  R  D  M  *  T  I  *  D  Y  S  S  K  V  N  C  L  S  P  P  N  E  R  S  C  R  G  R  Q  Q  E  Y  Q  K  D  F  E  E  N  D  *  Q  T  A  R  L  A  *  N  V  T  I  C  F  T  R  L  S  N  D  G  Q  N  I  D  W  A  T  P  Y  L  L  V  Y  G  T  E  T  V  L  P  V  E  V  E  I  P  *  L  R  I  I  Q  E  A  E  L  S  N  A  E  W  V  N  K  W  I  D  Q  L  A  L  I  D  E  K  R  M  V  A  V  C  H  G  P  V  V  *  T  E  N  D  S  R  F  S  Q  K  S  K  S  Q  K  F  *  S  W  S  V  G  S </first_frame>
            <second_frame>  D  L  I  Q  V  P  P  H  K  L  N  A  M  S  S  P  W  P  F  V  A  W  G  M  D  V  I  G  P  I  E  P  A  A  S  N  G  H  R  F  I  L  V  A  I  D  Y  F  T  K  W  V  E  A  A  S  Y  K  S  V  T  K  K  V  V  A  D  F  V  R  N  N  L  I  C  R  F  R  V  P  E  S  I  I  T  D  N  D  A  N  L  N  S  H  L  M  K  E  I  C  E  Q  F  K  I  I  H  R  K  S  T  A  Y  R  P  Q  M  N  G  V  V  E  A  A  N  K  N  I  K  K  I  L  R  K  M  I  D  K  Q  R  G  W  H  E  M  L  P  Y  A  L  L  G  Y  R  T  T  V  R  T  S  T  G  L  L  H  T  C  *  Y  M  E  Q  R  Q  S  Y  L  L  R  S  R  Y  H  S  *  G  S  S  K  K  L  N  *  V  T  P  N  G  L  I  N  G  L  I  N  W  L  *  L  M  R  R  E  W  S  P  F  A  M  A  Q  L  Y  R  Q  R  M  T  R  A  F  H  K  R  V  R  A  R  N  F  E  V  G  Q  L  V   </second_frame>
            <third_frame>   I  *  Y  R  Y  H  L  T  N  L  T  P  *  V  H  L  G  P  L  *  L  G  E  W  M  S  S  V  L  *  S  Q  P  L  L  M  G  T  D  S  F  *  S  P  L  I  I  S  P  N  G  W  R  R  L  L  T  S  R  *  P  R  K  W  W  P  I  L  S  A  T  I  *  Y  A  D  L  E  F  L  N  P  S  L  L  I  T  T  Q  I  S  T  V  I  *  *  K  R  Y  V  N  N  L  R  L  F  I  E  S  Q  L  P  I  A  P  K  *  T  E  L  *  R  P  P  T  R  I  S  K  R  F  *  G  K  *  L  T  N  S  E  V  G  M  K  C  Y  H  M  L  Y  *  V  I  E  R  R  S  E  H  R  L  G  Y  S  I  L  A  S  I  W  N  R  D  S  L  T  C  *  G  R  D  T  I  V  E  D  H  P  R  S  *  I  K  *  R  R  M  G  *  *  M  D  *  S  T  G  F  D  *  *  E  E  N  G  R  R  L  P  W  P  S  C  I  D  R  E  *  L  A  L  F  T  K  E  *  E  P  E  I  L  K  L  V  S  W  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="101856" stop="101353"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>501</number_coding_nucleotides>
                  <number_encoded_amino_acids>167</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DLIQVPPHKLNAMSSPWPFVAWGMDVIGPIEPAASNGHRFILVAIDYFTKWVEAASYKSVTKKVVADFVRNNLICRFRVPESIITDNDANLNSHLMKEICEQFKIIHRKSTAYRPQMNGVVEAANKNIKKILRKMIDKQRGWHEMLPYALLGYRTTVRTSTGLLHTC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="113850" PGL_stop="113514"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="113850" e_stop="113514"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.911"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.911">
            <gDNA_exon_boundary e_start="113850" e_stop="113514" e_length="337"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113850" stop="113514"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357033" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACTGAGTAGATATAATCGGCCAACTCAAAATAGAAAACAATATATACCAAGTAATATCATAAAATCAACTATGATACTCAACATGTAGCAACAACAAGTACTATATCATTAACAATTACCGTCAAGTTCACACATGAGGACTCAAGCCTCAATACCATACTCATTTGGGAATCATGTTCATTAGATTGAGTATATTAATATCTTTCAAGATTCATTATCTTTATTTCTCTTGTGTCGGTACGTGACACTCCGCTCCCTCATATCCATTAATCCTCTTGTGTCGGTACGTGACACTCCGATCCCCTAAATCTACGTGTCGGTTCGTGACACCCGATCC</gDNA_template>
            <first_frame> T  E  *  I  *  S  A  N  S  K  *  K  T  I  Y  T  K  *  Y  H  K  I  N  Y  D  T  Q  H  V  A  T  T  S  T  I  S  L  T  I  T  V  K  F  T  H  E  D  S  S  L  N  T  I  L  I  W  E  S  C  S  L  D  *  V  Y  *  Y  L  S  R  F  I  I  F  I  S  L  V  S  V  R  D  T  P  L  P  H  I  H  *  S  S  C  V  G  T  *  H  S  D  P  L  N  L  R  V  G  S  *  H  P  I  </first_frame>
            <second_frame>  L  S  R  Y  N  R  P  T  Q  N  R  K  Q  Y  I  P  S  N  I  I  K  S  T  M  I  L  N  M  *  Q  Q  Q  V  L  Y  H  *  Q  L  P  S  S  S  H  M  R  T  Q  A  S  I  P  Y  S  F  G  N  H  V  H  *  I  E  Y  I  N  I  F  Q  D  S  L  S  L  F  L  L  C  R  Y  V  T  L  R  S  L  I  S  I  N  P  L  V  S  V  R  D  T  P  I  P  *  I  Y  V  S  V  R  D  T  R  S </second_frame>
            <third_frame>   *  V  D  I  I  G  Q  L  K  I  E  N  N  I  Y  Q  V  I  S  *  N  Q  L  *  Y  S  T  C  S  N  N  K  Y  Y  I  I  N  N  Y  R  Q  V  H  T  *  G  L  K  P  Q  Y  H  T  H  L  G  I  M  F  I  R  L  S  I  L  I  S  F  K  I  H  Y  L  Y  F  S  C  V  G  T  *  H  S  A  P  S  Y  P  L  I  L  L  C  R  Y  V  T  L  R  S  P  K  S  T  C  R  F  V  T  P  D   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0284C08.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="+" PGL_start="113524" PGL_stop="114003"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="113524" e_stop="114003"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.935"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.935">
            <gDNA_exon_boundary e_start="113524" e_stop="114003" e_length="480"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113524" stop="113761"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391780" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113525" stop="114003"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246710" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCACGAACCGACACGTAGATTTAGGGGATCGGAGTGTCACGTACCGACACAAGAGGATTAATGGATATGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATATTAATATACTCAATCTAATGAACATGATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTGACGGTAATTGTTAATGATATAGTACTTGTTGTTGCTACATGTTGAGTATCATAGTTGATTTTATGATATTACTTGGTATATATTGTTTTCTATTTTGAGTTGGCCGATTATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTTTTCTTCTTGTTATTTGTGGAGTTCAGCAAACGCGCCGTCGTCTTCAACTCAACAGTAATTCTAGCCAGTCTTCGTCACACCGGATCTTCAGGGTGAGCTAACCCTTCTAGCTTGGACT</gDNA_template>
            <first_frame> S  R  T  D  T  *  I  *  G  I  G  V  S  R  T  D  T  R  G  L  M  D  M  R  E  R  S  V  T  Y  R  H  K  R  N  K  D  N  E  S  *  K  I  L  I  Y  S  I  *  *  T  *  F  P  N  E  Y  G  I  E  A  *  V  L  M  C  E  L  D  G  N  C  *  *  Y  S  T  C  C  C  Y  M  L  S  I  I  V  D  F  M  I  L  L  G  I  Y  C  F  L  F  *  V  G  R  L  Y  L  L  S  T  R  V  L  Y  *  P  L  L  L  C  F  S  S  C  Y  L  W  S  S  A  N  A  P  S  S  S  T  Q  Q  *  F  *  P  V  F  V  T  P  D  L  Q  G  E  L  T  L  L  A  W  T </first_frame>
            <second_frame>  H  E  P  T  R  R  F  R  G  S  E  C  H  V  P  T  Q  E  D  *  W  I  *  G  S  G  V  S  R  T  D  T  R  E  I  K  I  M  N  L  E  R  Y  *  Y  T  Q  S  N  E  H  D  S  Q  M  S  M  V  L  R  L  E  S  S  C  V  N  L  T  V  I  V  N  D  I  V  L  V  V  A  T  C  *  V  S  *  L  I  L  *  Y  Y  L  V  Y  I  V  F  Y  F  E  L  A  D  Y  I  Y  S  V  P  V  F  C  T  D  P  Y  F  Y  V  F  L  L  V  I  C  G  V  Q  Q  T  R  R  R  L  Q  L  N  S  N  S  S  Q  S  S  S  H  R  I  F  R  V  S  *  P  F  *  L  G   </second_frame>
            <third_frame>   T  N  R  H  V  D  L  G  D  R  S  V  T  Y  R  H  K  R  I  N  G  Y  E  G  A  E  C  H  V  P  T  Q  E  K  *  R  *  *  I  L  K  D  I  N  I  L  N  L  M  N  M  I  P  K  *  V  W  Y  *  G  L  S  P  H  V  *  T  *  R  *  L  L  M  I  *  Y  L  L  L  L  H  V  E  Y  H  S  *  F  Y  D  I  T  W  Y  I  L  F  S  I  L  S  W  P  I  I  S  T  Q  Y  P  C  F  V  L  T  P  T  F  M  F  F  F  L  L  F  V  E  F  S  K  R  A  V  V  F  N  S  T  V  I  L  A  S  L  R  H  T  G  S  S  G  *  A  N  P  S  S  L  D  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="+"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="113787" stop="113981"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FYDITWYILFSILSWPIISTQYPCFVLTPTFMFFFLLFVEFSKRAVVFNSTVILASLRHTGSSG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="-" PGL_start="116143" PGL_stop="114785"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="116143" e_stop="114785"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.949"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.949">
            <gDNA_exon_boundary e_start="116143" e_stop="114785" e_length="1359"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116143" stop="115431"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379315" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116143" stop="115548"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116143" stop="115618"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204434" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116072" stop="115393"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368762" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116072" stop="115714"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240817" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115623" stop="114965"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355232" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115554" stop="114793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355244" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115554" stop="114894"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351414" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115327" stop="114785"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355026" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115151" stop="114821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352716" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAATCCCTTGACGAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCATGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAAAATTTCCAATACCATTCTCAAATGCTCCTCATGTTCTTTCTTGCTCTTTGAGTATATCAGTATATCATCAATAAATACGATCACGAAGAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGATCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTCGTTTGAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACTGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGGTACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTTACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATAAAGCCTTTGTTTAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCTGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCCGGTTCAAGATCAATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCGCGGACCACCGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACGCACCGGATTGGAAGTGTAGTCACCCTTCCACACTAACGGAACTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACGAAGTTCACCAAACAGGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGAATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGC</gDNA_template>
            <first_frame> E  S  L  D  E  S  A  V  V  A  S  *  P  N  K  A  P  Y  F  *  H  I  S  R  S  Y  P  I  L  H  C  L  N  L  R  R  I  H  H  H  S  I  L  R  N  H  V  P  Q  E  G  H  C  I  *  P  K  L  T  L  R  E  L  G  I  K  L  F  L  P  Q  N  F  Q  Y  H  S  Q  M  L  L  M  F  F  L  A  L  *  V  Y  Q  Y  I  I  N  K  Y  D  H  E  E  V  Q  I  W  L  K  N  P  V  H  Q  D  H  E  R  S  R  G  I  R  K  T  K  R  H  H  Y  K  F  V  M  P  I  P  R  L  K  S  S  L  W  H  I  R  C  P  Y  F  Q  L  M  I  T  G  S  Q  V  N  L  R  E  D  T  S  T  L  *  L  I  E  Q  V  I  N  A  R  K  R  V  L  V  L  Y  G  Y  L  V  Q  L  P  V  V  Y  A  H  P  K  T  P  I  L  L  L  Y  K  Q  N  R  S  T  P  R  R  C  T  W  S  N  K  A  F  V  *  Q  L  L  K  L  G  F  *  L  S  *  L  C  G  S  H  S  I  R  G  Y  R  N  G  A  S  T  R  F  K  I  N  T  E  V  N  I  P  I  W  W  H  T  R  K  I  C  R  E  H  I  Q  K  L  A  D  H  R  N  R  L  N  R  R  Y  L  G  S  V  I  L  E  M  C  Q  E  S  *  T  P  F  T  N  H  F  L  S  T  K  K  G  D  D  T  H  R  I  G  S  V  V  T  L  P  H  *  R  N  C  P  R  L  G  *  R  H  R  F  S  I  T  I  Q  D  R  K  L  R  R  K  P  S  H  T  Q  N  Y  I  K  I  I  H  F  *  D  N  Q  I  Y  I  S  V  A  P  H  E  V  H  Q  T  G  P  I  Y  L  F  N  Y  H  R  L  T  H  R  S  R  N  T  N  R  N  I  K  *  F  T  M  *  I  *  T  I  S  K  *  G  R  Y  I  R  K  C  G  S  R  I  K  Q  Y  R  S  H  A  I  T  N  Q  K  I  T  C  D  D  S  I  R  C  L  R </first_frame>
            <second_frame>  N  P  L  T  N  R  R  *  *  L  A  N  P  T  K  L  L  I  S  D  T  L  V  G  L  T  Q  F  F  T  V  S  I  L  E  G  S  T  I  T  P  S  L  E  T  M  C  P  K  K  D  T  A  S  S  Q  N  S  H  L  E  N  L  A  *  S  F  F  S  L  K  I  S  N  T  I  L  K  C  S  S  C  S  F  L  L  F  E  Y  I  S  I  S  S  I  N  T  I  T  K  R  S  K  Y  G  L  K  I  P  F  I  K  I  M  N  A  A  G  A  F  V  R  P  K  D  I  T  T  N  S  *  C  P  Y  L  V  *  K  A  V  F  G  T  S  V  A  R  I  F  N  *  *  *  L  D  L  K  S  I  L  E  K  T  Q  A  P  C  N  *  S  N  K  S  S  M  R  G  R  G  Y  L  F  F  M  V  T  L  F  N  C  R  *  S  M  H  I  R  K  L  P  S  F  F  F  T  N  K  I  G  A  P  Q  G  D  A  L  G  L  I  K  P  L  F  N  N  S  *  S  W  A  F  N  S  L  N  S  A  G  A  I  L  *  G  G  I  E  M  G  R  V  P  G  S  R  S  I  Q  K  S  I  S  L  S  G  G  I  P  G  R  S  A  G  N  T  S  R  N  S  R  T  T  E  T  D  S  I  E  G  T  W  V  V  S  S  L  R  C  A  K  K  A  K  H  P  L  L  T  I  F  L  A  R  R  K  E  M  I  R  T  G  L  E  V  *  S  P  F  H  T  N  G  T  V  P  G  L  A  N  V  T  V  L  A  L  Q  S  K  I  A  N  C  G  E  S  Q  V  I  P  R  I  T  S  K  S  S  I  S  K  I  T  K  S  T  *  V  L  L  P  T  K  F  T  K  Q  D  L  Y  T  F  S  T  T  T  D  S  P  T  G  V  E  T  R  I  G  I  S  S  N  S  Q  C  K  F  R  P  L  A  N  E  E  D  T  *  E  N  V  D  P  G  S  N  N  T  E  A  M  Q  S  Q  T  R  R  L  P  V  M  T  A  S  D  A  S   </second_frame>
            <third_frame>   I  P  *  R  I  G  G  S  S  *  L  T  Q  Q  S  S  L  F  L  T  H  *  *  V  L  P  N  S  S  L  S  Q  S  *  K  D  P  P  S  L  H  P  *  K  P  C  A  P  R  R  T  L  H  L  A  K  T  H  T  *  R  T  W  H  K  A  F  S  P  S  K  F  P  I  P  F  S  N  A  P  H  V  L  S  C  S  L  S  I  S  V  Y  H  Q  *  I  R  S  R  R  G  P  N  M  A  *  K  S  R  S  S  R  S  *  T  Q  Q  G  H  S  *  D  Q  K  T  S  L  Q  I  R  N  A  H  T  S  F  E  K  Q  S  L  A  H  P  L  P  V  F  S  I  D  D  N  W  I  S  S  Q  S  *  R  R  H  K  H  L  V  T  D  R  T  S  H  Q  C  E  E  E  G  T  C  S  L  W  L  P  C  S  T  A  G  S  L  C  T  S  E  N  S  H  P  S  S  L  Q  T  K  S  E  H  P  K  E  M  H  L  V  *  *  S  L  C  L  T  T  L  E  V  G  L  L  T  L  L  T  L  R  E  P  F  Y  K  G  V  *  K  W  G  E  Y  P  V  Q  D  Q  Y  R  S  Q  Y  P  Y  L  V  A  Y  Q  E  D  L  Q  G  T  H  P  E  T  R  G  P  P  K  P  T  Q  S  K  V  L  G  *  C  H  P  *  D  V  P  R  K  L  N  T  L  Y  *  P  F  S  *  H  E  E  R  R  *  Y  A  P  D  W  K  C  S  H  P  S  T  L  T  E  L  S  Q  A  W  L  T  S  P  F  *  H  Y  N  P  R  S  Q  I  A  E  K  A  K  S  Y  P  E  L  H  Q  N  H  P  F  L  R  *  P  N  L  H  K  C  C  S  P  R  S  S  P  N  R  T  Y  I  P  F  Q  L  P  Q  T  H  P  P  E  *  K  H  E  *  E  Y  Q  V  I  H  N  V  N  L  D  H  *  Q  M  R  K  I  H  K  K  M  W  I  Q  D  Q  T  I  Q  K  P  C  N  H  K  P  E  D  Y  L  *  *  Q  H  Q  M  P  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="115416" stop="115171"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GGIEMGRVPGSRSIQKSISLSGGIPGRSAGNTSRNSRTTETDSIEGTWVVSSLRCAKKAKHPLLTIFLARRKEMIRTGLEV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="115879" stop="115640"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VYQYIINKYDHEEVQIWLKNPVHQDHERSRGIRKTKRHHYKFVMPIPRLKSSLWHIRCPYFQLMITGSQVNLREDTSTL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="115438" stop="115238"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LCGSHSIRGYRNGASTRFKINTEVNIPIWWHTRKICREHIQKLADHRNRLNRRYLGSVILEMCQES*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="115947" stop="115750"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFFSLKISNTILKCSSCSFLLFEYISISSINTITKRSKYGLKIPFIKIMNAAGAFVRPKDITTNS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="-" PGL_start="117624" PGL_stop="117448"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="117624" e_stop="117448"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.955"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.955">
            <gDNA_exon_boundary e_start="117624" e_stop="117448" e_length="177"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="117624" stop="117448"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577888" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTACATCTCCTACCATACAATGCTTCAAATGGAGCCATATCAATGCTTGAGTGATAGCTATTATTGTATGAAAATTCCGCTAAGGGTAAGAAGCTATCGCAATGGCCACCAAACTCTATCACACATGCGCGAAGCATATCCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</gDNA_template>
            <first_frame> L  H  L  L  P  Y  N  A  S  N  G  A  I  S  M  L  E  *  *  L  L  L  Y  E  N  S  A  K  G  K  K  L  S  Q  W  P  P  N  S  I  T  H  A  R  S  I  S  S  N  T  *  I  V  R  S  D  *  P  S </first_frame>
            <second_frame>  Y  I  S  Y  H  T  M  L  Q  M  E  P  Y  Q  C  L  S  D  S  Y  Y  C  M  K  I  P  L  R  V  R  S  Y  R  N  G  H  Q  T  L  S  H  M  R  E  A  Y  P  P  T  L  E  S  F  A  Q  T  D  H   </second_frame>
            <third_frame>   T  S  P  T  I  Q  C  F  K  W  S  H  I  N  A  *  V  I  A  I  I  V  *  K  F  R  *  G  *  E  A  I  A  M  A  T  K  L  Y  H  T  C  A  K  H  I  L  Q  H  L  N  R  S  L  R  L  T  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0284C08.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="21" PGL_strand="+" PGL_start="123546" PGL_stop="125523"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="123546" e_stop="123650"/>
            <exon e_start="125046" e_stop="125523"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.905"/>
          <exon-only e_score="0.912"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.905">
            <gDNA_exon_boundary e_start="123546" e_stop="123650" e_length="105"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="123651" i_stop="125045" i_length="1395"/>
          </intron>
          <exon e_serial="2" e_score="0.912">
            <gDNA_exon_boundary e_start="125046" e_stop="125523" e_length="478"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="123546" stop="123650"/>
              <exon start="125046" stop="125523"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E561175" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTCTAAGTTCATTTACTTCATCCTAATCACTATCATTATGTTTAAATTCAGGATAATCATTATAATTATTAAATAGCATAGTAATAGGTTGTCTATATGTATAAG : CAACTTCAAACATATCATAAAAGGAATTCCATCTATTTTTTACATGCTTCAGAACTTTTTTAAACGAAAGTTTGAATGCGTTACAAAGCTCTTTAAATTGATTAATTCTAATACTATTATTCATATGAAAAATATAAAAACAAGCATTATCAATTTTATCACAACTATTTTCAAATAATTTCATACCTTCACTAACAATCAAATTTAATATATGCGCAACATATCTAGCATGAAAACATATTTATTAATAGGACAAAGTCTATGTTCTAGCATATTAGTAGCATATAAATTAGCAGAAGTATTATCTAAAGTAATACTAATGACTTTATCACAAAGACCGAAAAAATTTGAAATTTTCATTACTGTAGTAGCAATACACGTTCGAGTTTTTTTCTTTTGACAAATTTTATAACCAATAATTCTTTTTTGTAAATTTCAACTATACTCAATCCAATGCGCAATTATAGTTAAATAATCA</gDNA_template>
            <first_frame> F  *  V  H  L  L  H  P  N  H  Y  H  Y  V  *  I  Q  D  N  H  Y  N  Y  *  I  A  *  *  *  V  V  Y  M  Y  K  :  Q  L  Q  T  Y  H  K  R  N  S  I  Y  F  L  H  A  S  E  L  F  *  T  K  V  *  M  R  Y  K  A  L  *  I  D  *  F  *  Y  Y  Y  S  Y  E  K  Y  K  N  K  H  Y  Q  F  Y  H  N  Y  F  Q  I  I  S  Y  L  H  *  Q  S  N  L  I  Y  A  Q  H  I  *  H  E  N  I  F  I  N  R  T  K  S  M  F  *  H  I  S  S  I  *  I  S  R  S  I  I  *  S  N  T  N  D  F  I  T  K  T  E  K  I  *  N  F  H  Y  C  S  S  N  T  R  S  S  F  F  L  L  T  N  F  I  T  N  N  S  F  L  *  I  S  T  I  L  N  P  M  R  N  Y  S  *  I  I  </first_frame>
            <second_frame>  S  K  F  I  Y  F  I  L  I  T  I  I  M  F  K  F  R  I  I  I  I  I  I  K  *  H  S  N  R  L  S  I  C  I  S :   N  F  K  H  I  I  K  G  I  P  S  I  F  Y  M  L  Q  N  F  F  K  R  K  F  E  C  V  T  K  L  F  K  L  I  N  S  N  T  I  I  H  M  K  N  I  K  T  S  I  I  N  F  I  T  T  I  F  K  *  F  H  T  F  T  N  N  Q  I  *  Y  M  R  N  I  S  S  M  K  T  Y  L  L  I  G  Q  S  L  C  S  S  I  L  V  A  Y  K  L  A  E  V  L  S  K  V  I  L  M  T  L  S  Q  R  P  K  K  F  E  I  F  I  T  V  V  A  I  H  V  R  V  F  F  F  *  Q  I  L  *  P  I  I  L  F  C  K  F  Q  L  Y  S  I  Q  C  A  I  I  V  K  *  S </second_frame>
            <third_frame>   L  S  S  F  T  S  S  *  S  L  S  L  C  L  N  S  G  *  S  L  *  L  L  N  S  I  V  I  G  C  L  Y  V  *   : A  T  S  N  I  S  *  K  E  F  H  L  F  F  T  C  F  R  T  F  L  N  E  S  L  N  A  L  Q  S  S  L  N  *  L  I  L  I  L  L  F  I  *  K  I  *  K  Q  A  L  S  I  L  S  Q  L  F  S  N  N  F  I  P  S  L  T  I  K  F  N  I  C  A  T  Y  L  A  *  K  H  I  Y  *  *  D  K  V  Y  V  L  A  Y  *  *  H  I  N  *  Q  K  Y  Y  L  K  *  Y  *  *  L  Y  H  K  D  R  K  N  L  K  F  S  L  L  *  *  Q  Y  T  F  E  F  F  S  F  D  K  F  Y  N  Q  *  F  F  F  V  N  F  N  Y  T  Q  S  N  A  Q  L  *  L  N  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="+"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="123622" stop="123650"/>
                    <exon start="125046" stop="125223"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HSNRLSICISNFKHIIKGIPSIFYMLQNFFKRKFECVTKLFKLINSNTIIHMKNIKTSIINFITTIFK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="22" PGL_strand="-" PGL_start="125839" PGL_stop="125245"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="125839" e_stop="125245"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.901"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.901">
            <gDNA_exon_boundary e_start="125839" e_stop="125245" e_length="595"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125839" stop="125245"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E447237" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125702" stop="125541"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E447233" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTTCTAGATGAATGAAATACTTCGAACTCAAGTGGTCCTCTTACACATCAAACCTATAAAAAGGATTGTTATCGATTTTTTTTTGCTAAAATGGTTGTTGTTTGTTGTTTATCTTTTCATTTTGGAGAACATCCAGGTTTTATTGCATATATTCGTGAAACATATAGTCCTAGTTTTAAAGGTTTATCAAGAATCATGGTAAAAGAAATATTTTTGAATTTCAAGAAAAACATTGTCAATATTTGTGTGCCTATTTTGAACCGATGGATTGTAAAGTTGCTATTACCACTTATATGGGTCGTAGTCCTAATGGTTTTGATTATTTAACTATAATTGCGCATTGGATTGAGTATAGTTGAAATTTACAAAAAAGAATTATTGGTTATAAAATTTGTCAAAAGAAAAAAACTCGAACGTGTATTGCTACTACAGTAATGAAAATTTCAAATTTTTTCGGTCTTTGTGATAAAGTCATTAGTATTACTTTAGATAATACTTCTGCTAATTTATATGCTACTAATATGCTAGAACATAGACTTTGTCCTATTAATAAATATGTTTTCATGCTAGATATGTTGCGCATATATTAAATTTG</gDNA_template>
            <first_frame> L  L  D  E  *  N  T  S  N  S  S  G  P  L  T  H  Q  T  Y  K  K  D  C  Y  R  F  F  F  A  K  M  V  V  V  C  C  L  S  F  H  F  G  E  H  P  G  F  I  A  Y  I  R  E  T  Y  S  P  S  F  K  G  L  S  R  I  M  V  K  E  I  F  L  N  F  K  K  N  I  V  N  I  C  V  P  I  L  N  R  W  I  V  K  L  L  L  P  L  I  W  V  V  V  L  M  V  L  I  I  *  L  *  L  R  I  G  L  S  I  V  E  I  Y  K  K  E  L  L  V  I  K  F  V  K  R  K  K  L  E  R  V  L  L  L  Q  *  *  K  F  Q  I  F  S  V  F  V  I  K  S  L  V  L  L  *  I  I  L  L  L  I  Y  M  L  L  I  C  *  N  I  D  F  V  L  L  I  N  M  F  S  C  *  I  C  C  A  Y  I  K  F  </first_frame>
            <second_frame>  F  *  M  N  E  I  L  R  T  Q  V  V  L  L  H  I  K  P  I  K  R  I  V  I  D  F  F  L  L  K  W  L  L  F  V  V  Y  L  F  I  L  E  N  I  Q  V  L  L  H  I  F  V  K  H  I  V  L  V  L  K  V  Y  Q  E  S  W  *  K  K  Y  F  *  I  S  R  K  T  L  S  I  F  V  C  L  F  *  T  D  G  L  *  S  C  Y  Y  H  L  Y  G  S  *  S  *  W  F  *  L  F  N  Y  N  C  A  L  D  *  V  *  L  K  F  T  K  K  N  Y  W  L  *  N  L  S  K  E  K  N  S  N  V  Y  C  Y  Y  S  N  E  N  F  K  F  F  R  S  L  *  *  S  H  *  Y  Y  F  R  *  Y  F  C  *  F  I  C  Y  *  Y  A  R  T  *  T  L  S  Y  *  *  I  C  F  H  A  R  Y  V  A  H  I  L  N  L </second_frame>
            <third_frame>   S  R  *  M  K  Y  F  E  L  K  W  S  S  Y  T  S  N  L  *  K  G  L  L  S  I  F  F  C  *  N  G  C  C  L  L  F  I  F  S  F  W  R  T  S  R  F  Y  C  I  Y  S  *  N  I  *  S  *  F  *  R  F  I  K  N  H  G  K  R  N  I  F  E  F  Q  E  K  H  C  Q  Y  L  C  A  Y  F  E  P  M  D  C  K  V  A  I  T  T  Y  M  G  R  S  P  N  G  F  D  Y  L  T  I  I  A  H  W  I  E  Y  S  *  N  L  Q  K  R  I  I  G  Y  K  I  C  Q  K  K  K  T  R  T  C  I  A  T  T  V  M  K  I  S  N  F  F  G  L  C  D  K  V  I  S  I  T  L  D  N  T  S  A  N  L  Y  A  T  N  M  L  E  H  R  L  C  P  I  N  K  Y  V  F  M  L  D  M  L  R  I  Y  *  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="22" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125824" stop="125513"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>309</number_coding_nucleotides>
                  <number_encoded_amino_acids>103</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NTSNSSGPLTHQTYKKDCYRFFFAKMVVVCCLSFHFGEHPGFIAYIRETYSPSFKGLSRIMVKEIFLNFKKNIVNICVPILNRWIVKLLLPLIWVVVLMVLII*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="22" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125480" stop="125250"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NLQKRIIGYKICQKKKTRTCIATTVMKISNFFGLCDKVISITLDNTSANLYATNMLEHRLCPINKYVFMLDMLRIY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="23" PGL_strand="+" PGL_start="133370" PGL_stop="133888"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="133370" e_stop="133888"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.950"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.950">
            <gDNA_exon_boundary e_start="133370" e_stop="133888" e_length="519"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133370" stop="133888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E547123" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="23" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTGAGCGGAAAGTATGTTGTTGTGGTAGATTTCAACTAGATGAGATACCTTGTTCACATGCAATCACTGTATTGAAAAAAAAGAATGTCACCGATATAAATCCGTATTGCTCTGATTATTACAAGCCTGATGCGTTGGCAAAAATATATGAAATTCCAATGGTGCCAATGCCAGATAAGAAAGATTGGTCAGATCCTAAACACGTGGTAGCTGAAACTGTGCATCCACCTAGATACAGAAGATCATCTGGACGACCAAGAAAAAGAAGAAGAAAGAATGCAGATGAAAAGATTTCGGTGAACACAAACTGTTGTGGACAATGTGGACAAGAAGGGCACAACAGAAGAACTTGTACTTTCTACCCAAAAGAGAAGTGAATTAGTCGCAATGTTTCTATGATATCAAGAATAATTTATAACGTAAACATTTTAATGAATTTCAGTTTTCATTACAACTGCAAATTGAACACTTTTTGTTTAGATAAATAAACGTACAAACATGTGGTAATTAAATTTGAA</gDNA_template>
            <first_frame> L  E  R  K  V  C  C  C  G  R  F  Q  L  D  E  I  P  C  S  H  A  I  T  V  L  K  K  K  N  V  T  D  I  N  P  Y  C  S  D  Y  Y  K  P  D  A  L  A  K  I  Y  E  I  P  M  V  P  M  P  D  K  K  D  W  S  D  P  K  H  V  V  A  E  T  V  H  P  P  R  Y  R  R  S  S  G  R  P  R  K  R  R  R  K  N  A  D  E  K  I  S  V  N  T  N  C  C  G  Q  C  G  Q  E  G  H  N  R  R  T  C  T  F  Y  P  K  E  K  *  I  S  R  N  V  S  M  I  S  R  I  I  Y  N  V  N  I  L  M  N  F  S  F  H  Y  N  C  K  L  N  T  F  C  L  D  K  *  T  Y  K  H  V  V  I  K  F  E </first_frame>
            <second_frame>  L  S  G  K  Y  V  V  V  V  D  F  N  *  M  R  Y  L  V  H  M  Q  S  L  Y  *  K  K  R  M  S  P  I  *  I  R  I  A  L  I  I  T  S  L  M  R  W  Q  K  Y  M  K  F  Q  W  C  Q  C  Q  I  R  K  I  G  Q  I  L  N  T  W  *  L  K  L  C  I  H  L  D  T  E  D  H  L  D  D  Q  E  K  E  E  E  R  M  Q  M  K  R  F  R  *  T  Q  T  V  V  D  N  V  D  K  K  G  T  T  E  E  L  V  L  S  T  Q  K  R  S  E  L  V  A  M  F  L  *  Y  Q  E  *  F  I  T  *  T  F  *  *  I  S  V  F  I  T  T  A  N  *  T  L  F  V  *  I  N  K  R  T  N  M  W  *  L  N  L   </second_frame>
            <third_frame>   *  A  E  S  M  L  L  W  *  I  S  T  R  *  D  T  L  F  T  C  N  H  C  I  E  K  K  E  C  H  R  Y  K  S  V  L  L  *  L  L  Q  A  *  C  V  G  K  N  I  *  N  S  N  G  A  N  A  R  *  E  R  L  V  R  S  *  T  R  G  S  *  N  C  A  S  T  *  I  Q  K  I  I  W  T  T  K  K  K  K  K  K  E  C  R  *  K  D  F  G  E  H  K  L  L  W  T  M  W  T  R  R  A  Q  Q  K  N  L  Y  F  L  P  K  R  E  V  N  *  S  Q  C  F  Y  D  I  K  N  N  L  *  R  K  H  F  N  E  F  Q  F  S  L  Q  L  Q  I  E  H  F  L  F  R  *  I  N  V  Q  T  C  G  N  *  I  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="+"/>
                <serials PGL_serial="23" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="133370" stop="133747"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>375</number_coding_nucleotides>
                  <number_encoded_amino_acids>125</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LERKVCCCGRFQLDEIPCSHAITVLKKKNVTDINPYCSDYYKPDALAKIYEIPMVPMPDKKDWSDPKHVVAETVHPPRYRRSSGRPRKRRRKNADEKISVNTNCCGQCGQEGHNRRTCTFYPKEK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="24" PGL_strand="-" PGL_start="137300" PGL_stop="136392"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="137300" e_stop="137018"/>
            <exon e_start="136816" e_stop="136694"/>
            <exon e_start="136612" e_stop="136392"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.963" acc_prob="0.971" e_score="0.908"/>
          <exon-intron don_prob="0.991" acc_prob="0.908" e_score="0.951"/>
          <exon-only e_score="0.950"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.908">
            <gDNA_exon_boundary e_start="137300" e_stop="137018" e_length="283"/>
          </exon>
          <intron i_serial="1" don_prob="0.963" acc_prob="0.971">
            <gDNA_intron_boundary i_start="137017" i_stop="136817" i_length="201"/>
          </intron>
          <exon e_serial="2" e_score="0.951">
            <gDNA_exon_boundary e_start="136816" e_stop="136694" e_length="123"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.908">
            <gDNA_intron_boundary i_start="136693" i_stop="136613" i_length="81"/>
          </intron>
          <exon e_serial="3" e_score="0.950">
            <gDNA_exon_boundary e_start="136612" e_stop="136392" e_length="221"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="137300" stop="137018"/>
              <exon start="136816" stop="136694"/>
              <exon start="136612" stop="136392"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245630" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AACTGATTATTTTGATAAAAGCAAATCACACCAGCTGATGCGATCCATTAGAAAAGAGAACATCAATTTCCAGGCTGATACAAGCACATTTCAGTCTAACAAACAAACATCTCAGCAAATACCAGTTGATCTCGATGATATGGGTGGTGTAGCTGAGGATGGTGGTGGTTTTTCTGGTAAAAATGGTGAGCATCATATCGTCGACAATGCAAGGGATGTCGATATGGATGGTGTTGGTGTTTCCGTAAATGAGGGTGAATAAATAGTCAGTGATAATCTAAAG : GATGGTGACGCACATCAGTCGCACCAAGAATTAAATGAACATATCATGGACCAAGCCGTTGATGACAATGTTCATCACAACATCTCTCATGTGTTGCCCGAAAAAACAACAACGGATTCATCG : AGGATTCTTCAACTTCAACAACAATATCGCCATCAACTCAAGCGGCAATAGATGCGCTTATCAAAGATTTGGGTAAAGATGCTACTAATGCTAGACCATTATATTCTTACGATTCACAGAATATAACTAGCAGCCAGTACTTGTTGATCGACCGTCAATTACCCACTGATATTCCAATAACGGAGATTGCTGTTAAATCTGATGCAGTCACTCCTGCGCAT</gDNA_template>
            <first_frame> N  *  L  F  *  *  K  Q  I  T  P  A  D  A  I  H  *  K  R  E  H  Q  F  P  G  *  Y  K  H  I  S  V  *  Q  T  N  I  S  A  N  T  S  *  S  R  *  Y  G  W  C  S  *  G  W  W  W  F  F  W  *  K  W  *  A  S  Y  R  R  Q  C  K  G  C  R  Y  G  W  C  W  C  F  R  K  *  G  *  I  N  S  Q  *  *  S  K   : G  W  *  R  T  S  V  A  P  R  I  K  *  T  Y  H  G  P  S  R  *  *  Q  C  S  S  Q  H  L  S  C  V  A  R  K  N  N  N  G  F  I   : E  D  S  S  T  S  T  T  I  S  P  S  T  Q  A  A  I  D  A  L  I  K  D  L  G  K  D  A  T  N  A  R  P  L  Y  S  Y  D  S  Q  N  I  T  S  S  Q  Y  L  L  I  D  R  Q  L  P  T  D  I  P  I  T  E  I  A  V  K  S  D  A  V  T  P  A  H </first_frame>
            <second_frame>  T  D  Y  F  D  K  S  K  S  H  Q  L  M  R  S  I  R  K  E  N  I  N  F  Q  A  D  T  S  T  F  Q  S  N  K  Q  T  S  Q  Q  I  P  V  D  L  D  D  M  G  G  V  A  E  D  G  G  G  F  S  G  K  N  G  E  H  H  I  V  D  N  A  R  D  V  D  M  D  G  V  G  V  S  V  N  E  G  E  *  I  V  S  D  N  L  K  :  D  G  D  A  H  Q  S  H  Q  E  L  N  E  H  I  M  D  Q  A  V  D  D  N  V  H  H  N  I  S  H  V  L  P  E  K  T  T  T  D  S  S  :  R  I  L  Q  L  Q  Q  Q  Y  R  H  Q  L  K  R  Q  *  M  R  L  S  K  I  W  V  K  M  L  L  M  L  D  H  Y  I  L  T  I  H  R  I  *  L  A  A  S  T  C  *  S  T  V  N  Y  P  L  I  F  Q  *  R  R  L  L  L  N  L  M  Q  S  L  L  R   </second_frame>
            <third_frame>   L  I  I  L  I  K  A  N  H  T  S  *  C  D  P  L  E  K  R  T  S  I  S  R  L  I  Q  A  H  F  S  L  T  N  K  H  L  S  K  Y  Q  L  I  S  M  I  W  V  V  *  L  R  M  V  V  V  F  L  V  K  M  V  S  I  I  S  S  T  M  Q  G  M  S  I  W  M  V  L  V  F  P  *  M  R  V  N  K  *  S  V  I  I  *  R :   M  V  T  H  I  S  R  T  K  N  *  M  N  I  S  W  T  K  P  L  M  T  M  F  I  T  T  S  L  M  C  C  P  K  K  Q  Q  R  I  H  R :   G  F  F  N  F  N  N  N  I  A  I  N  S  S  G  N  R  C  A  Y  Q  R  F  G  *  R  C  Y  *  C  *  T  I  I  F  L  R  F  T  E  Y  N  *  Q  P  V  L  V  D  R  P  S  I  T  H  *  Y  S  N  N  G  D  C  C  *  I  *  C  S  H  S  C  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="24" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="136751" stop="136694"/>
                    <exon start="136612" stop="136392"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>279</number_coding_nucleotides>
                  <number_encoded_amino_acids>93</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QCSSQHLSCVARKNNNGFIEDSSTSTTISPSTQAAIDALIKDLGKDATNARPLYSYDSQNITSSQYLLIDRQLPTDIPITEIAVKSDAVTPAH</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="24" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="137299" stop="137039"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>258</number_coding_nucleotides>
                  <number_encoded_amino_acids>86</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TDYFDKSKSHQLMRSIRKENINFQADTSTFQSNKQTSQQIPVDLDDMGGVAEDGGGFSGKNGEHHIVDNARDVDMDGVGVSVNEGE*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="24" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="137038" stop="137018"/>
                    <exon start="136816" stop="136694"/>
                    <exon start="136612" stop="136562"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IVSDNLKDGDAHQSHQELNEHIMDQAVDDNVHHNISHVLPEKTTTDSSRILQLQQQYRHQLKRQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 349 chains have been computed
$ 
$ memory statistics:
$ 507680 bytes spliced alignments in total
$ 78 spliced alignments have been stored
$ 6508 bytes was the average size of a spliced alignment
$ 34136 bytes predicted gene locations in total
$ 24 predicted gene locations have been stored
$ 1422 bytes was the average size of a predicted gene location
$ 4 megabytes was the average size of the backtrace matrix
$ 444 backtrace matrices have been allocated
$ 
$ date finished: 2008-04-18 00:04:46
-->
