<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2008-02-20 07:57:39"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U332110" ref_strand="+" ref_description="SGN-U332110        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | inter-alpha-trypsin inhibitor heavy chain-related, similar to SP:Q61704 Inter-alpha-trypsin inhibitor heavy chain H3 precursor {Mus musculus}; contains Pfam profile PF00092: von Willebrand factor type A domain | chr1:6602117-6605899 FORWARD | Aliases: F14D16.26, F14D16_26(evalue: 2e-41, score=166) genbank/nr: IMP(evalue: 6e-41, score=171)">
      <seq>taaattttcaataggtctttcccactccagttccccatctttcatccaaaggttcattagtgttgtcaggcagataccgaggagtattccctgacacgcttaaagctaaaggagtccttgcagacttgagtaacttctccctggatctgaaagctatacagacaaaggacatacctcttgataaggtgttagcaaggcaacagattgaactacttactgctcaggcctggttgactgaaaataaggaccttgaacagaagatagcacaaacaagtatacagaatggcgtcatttctgagtatacacgcatgatattgatagagactgataaaggcaaagtaatcactgaatcaaccaccaacaccaagcgaaaggtttccactgctcctacgaagattgaagagcctaaattacagaagaagacattgctacagaatctcggggctggttttggtaactacagtgctacaaatgaaaatatttctcctggaaccaccgagacaaaacctgaaacagcagagattctagcgaaggcagcgtctaattgttgtggaaagacatgtgagatatgctgttgtatgtgctgcatacggacatgttcgaaaatgaacgatcaatgtgcaatcgtgctgacacagttcctgggttccttggcatgcttaggttgcttcgcttgctgtgaattatgctgttccgtaaatgatggatgagaaagttattgcatagcttccctgcaatcttgttgtatacagtttcatacatagtacaatttgtgtatcatggttttttgtgaatagtatgtatttatatacatacaagttttaccaattgctttactgtaatgatgtagaaatataacattttcatgtttgataatcagagaagaatgatgtctaaaagggagcatgattatttgccggaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="27508" stop="9182"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27208" g_stop="27024" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="185" r_length="185" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27023" i_stop="22610" i_length="4414">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22609" g_stop="22578" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="216" r_length="31" r_score="0.500"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="22577" i_stop="19067" i_length="3511">
            <donor d_prob="0.992" d_score="0.00"/>
            <acceptor a_prob="0.776" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19066" g_stop="19037" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="244" r_length="28" r_score="0.633"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19036" i_stop="14975" i_length="4062">
            <donor d_prob="0.570" d_score="0.00"/>
            <acceptor a_prob="0.988" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14974" g_stop="14957" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="259" r_length="15" r_score="0.667"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="14956" i_stop="10414" i_length="4543">
            <donor d_prob="0.556" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.64"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10413" g_stop="10285" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="374" r_length="115" r_score="0.729"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="10284" i_stop="10040" i_length="245">
            <donor d_prob="0.959" d_score="0.82"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10039" g_stop="9483" g_length="557"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="924" r_length="550" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="925" polyA_stop="946"/>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-U332110" ref_strand="+">
        <total_alignment_score>0.915</total_alignment_score>
        <cumulative_length_of_scored_exons>951</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U332110" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27208" e_stop="27024"/>
          <exon e_start="22609" e_stop="22578"/>
          <exon e_start="19066" e_stop="19037"/>
          <exon e_start="14974" e_stop="14957"/>
          <exon e_start="10413" e_stop="10285"/>
          <exon e_start="10039" e_stop="9483"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAATTTTCAATAGGTCTTTCCAACTCCAGTTCCAGACCTTTCATCCAAAGGTCCATTAGTGTTGTCAGGCAGATACCGAGGAGTATTCCCTGACACGCTTAAAGCTAAAGGAGTCCTTGCAGACTTGAGTAACTTCTCCCTGGATCTGAAAGCTATACAGACAAAGGACATACCTCTTGATAAGGTAACATAACTGTCTTAGGCTGTACTTTTATTAAGATTGTGACTTGTGAATCAGACTATTTTTTTTTAACATCTAAATGCGTAATTTATTTAGTTGTAGTAAATTGCAATTCAAATTTTTAGAAAAGAGTTAAATATTATATCAAGAAAATGTTAACTTGAACGATAAAATTATTATTTAAGTGATAAATTAGGATATTTAGAGATATAAATGAATATATGTTAGATATAATTATTGAACAATCTAAATTATTCAAAATAGATTTATAGATAAAAAAGTTGTTGTGATGAACATTGCAATTTAACATACATTAATATATTAATCGAACTTATCCAACAAACTAAAATATAATTGTTATATAGGTCTGATTTAGACTCTATAACGTATTTGAACAAGTAACTAACAATCATCTAATTTTGACATTCCATCATGGAAAAAGATTCAATTAACCAACTATACCTTTCTCAGAAATAAAAATAAAATTCTGTTAATGAAAAATATTGTATTCACAAGCATTTGAGCTTCTTTGCATTAGTTTGAGTGCAAGTTGGTCCCGCATATCGCTCATTATCTGAGAATCATCTTCTATTGTCCAGCTAGTTCCATTTGTTTCCTCCAATGTTTTTTCTTGTTGTCCTTTTCATCAAATATTACTAGAGGTGTATCAACTTGATGAAACAAGTTATCATTGATGTGTTCTTTCCTAATAAAATAATTAACTATAAGAAATGCTATAACAACACCCTTTTGAATATTAATAGGATATGGAACAATCTTGTCGAATAGAGGAAATCTTGCTTTCAGTATTCCATAAGAACGTTCAATAACATTTCTAAGTTGTGCATGAGCATGAATAAACTTTTCCTCCTTAGTTATAGCACGCCTATTACACTAGTTTCTTAACCAATATCTAATGTTACGATACAGTGCTTGAAATCCTCGAGTATTTAGAATATGCTGAGCGATCACATAGATAGTATTTATCTGACATTAAAATATGAAAATCAGGTTTTGTGATAAATATTTTTTTCTTCTAAAGATGATATATTATGAATAAAAAACTGTAATTATCCTTATTCCCTTCTTCCAAATCCCATTTTTAAAAAAAAATAAAATTTACTTCAATAGTAAATGTCCATAGTCCAATATATATAATCAACAATAAACCGAAAAAACATTTTGAAAACAACAAAATTCCATATCTTATTTAGAGCTTGGTTAGATGGGCTTATAGCTTATGACTTGTCGTAAGTTATGATTTCTAAATTATGAATTGCCTTAATTTTTATTAGTTTGACTTAAAAACAAGTGCACTACAAAATTTCTTAAAAAATATTTTAGCTTAATAGCTACTAAACTAAGCAATCAAATCCAGGCTCTTAGAATAGATACTCATAGATCCGCCAATTGTTTCGTCCTTTGCAACTGTTTTTGGCAAACCTAAATAGAAATAGGTTATATGAATATTGTATATAGTTCTTTCTTTGAATAAAATAGAGTTAACTCTAATTTGAGACTATTACTAGATCATAAACTAGACCAATTTTTTACGATGATAATTGAATACCAACCATAAGATTTTACTGTTTGCTAAGTGTCGTTCATTTTATCAAAGAGGGAGGGGCTCAAGTCAAACCTAGAATCTGTGGTTTCATGTATACTGTGTTTCTAGCTAATAGTAATAATGTGTGCATGACAAATATATGTAAAGTTTCTTTCATGTGATAATCAAACTAAAAAGGATTTATGGTCAATTATTGGTTGCTTGACCACTTATGATCATCTTCGGTTGGAAGGTAAACCAGTTCAATGTTTTTTCAATTTCCACGTTCATTACTTATTGGGAACTTAAATGTGTTACACATACCAATTAGGACAACATCTTCATTCATGAAACAAATAGTAACCTAACACAAATCAATAAACAATGTACTTCTAAAAAGTTTTTAAATCTTACCTATTCAAAAGGATTATTGAGTAGCCGATTGATAAATGGAGAAAGAAAGGAAAAGGAGGCGGTGATACTTGAGAAAGAGAGGAAGAGTAGGCACTGATTTTATGAAACAAACACTTCCAAGATTTTATTGTAAATTCATTAGTGTGTTTGAAGAGTCTCAATGGTGTTAAGATTCTTTCGCGGACCTGAACAAAGAGTTTACTTTCAGACCTATTAGGAGATCTTTTTTCTAAAAACAACAAATGCACCTAATGGGCTAAAAGTCAAACCATTCAAATTCAAACCTTTATTGAAGTGCAAACAAATGAGCCCTAAAATCTAAAGTGGAACATATTTTCCTCCCGAGAAAAAGCGAGGACAAAGGAAAAAATCATCCTAAATGGTAACTTTAGTAACTGGTCCTGGCCTTTTTTATCCCTGGTGGGGCGTTCTGGGACTTTTGGTCCGTTTGGGTGTAAGTCTGGTGGAAAAATTTGGGGGAAAGGGAATCCAGGGACTTTAGGGGTTAGTATTTTAAAATCTAAAAAATTTATTAACCTTTAGCCAACTTCCACCCCATGTTCTTGGGGTTGAGTTTTTTTTCTTTGTATTAAAATACTTTCAATTCTATCTATTTTTTTTTTCTTTTTTAAATTTTATTATTAATACATAAATATTTTGTATATTTTTCTCCATAATATTTCGTTGACGTGCTAGTAATATTTTTTATATTCTATTATTTTTCTCAACCTGTATTTTCCTTCCTAATCTCTTTATAAATCCTTCTACTTACCATCGGCTTCTATTATTGTCTGGTAACTCATCTTTGGCGTCGCATTTGTATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCATCATTGAGTGGGTACAAAAGTGTCTTCTAATTTTCAGGTACAATCTTATTAAGTCTAGATTTTTCCGTTTGATTTTCGAACTTCATTTGAATGATAACTTTCTAATTTTTTTAATATGTAAAATAAATAGCTTGAAAGGTATAATCACACATAAAAAATTGAGTGTTGTACACATATGATTTGATGTTGAATGATGATCAACTCTCTTTGAAACTCTCTAAGCATAGTTTCCCGCAGAAAAGAAACCATGTTATAAACTTTTAAACTATTAATAATAAATTGAAATTGCAGTTGTTTGCTAGCAAAATATATCACATTTTCTTCAACAAATCTAGCAACTCCAAGTCTTCTCTAGCAGTGATGGATAGTAGTTGTAAGCCTATAAATGTAAGTCTAGGTATATTTGAAAGTTTCTAAGGAAGTAGTTACATTTGTAACAACACACATTAAGGATGCAAGAAGATTTTAAGTAACGTCACATTTTCCCTTTTTAATTCTTTAACTTGATGTGTCTTTCTTGGAATATTTTATAAATATTGATATCTAATCATCTTTTGATTGATCAATGTCATGAATTTTAGTTGTTGATGTTTGTCTGTACATTTAATTGCTTATAAATGGGTAAGCTATGGAAACTTATCTAATGTACAGTAGATCGAAAATATCGAGAGAACACTCAAAAACATCATGTTCTCCTAATAGTTTATTATATACTTTTTCTTTTTTTTTTATTGATTTTTTATTTGGGATACACGTGCAATGCACGTGCCCGAAGACTAGTATTCTAATAAATATGAAGTTACTTACTTCCATTACACATTCTAATAAATGTGAAGTTACTTTTATTACACATTTTGATAAATTTAAAGTTACAAATCTAAGTTCAGAAAGATGAGAACAGTTGATCATAAATTGTTATCAACAACAGAGAGTACTAAGAACAATATAAAAGAAAGGCAGAAAAATGTGAGTTGCTCTCAAGTCTTACCTCTAATTTTATCAACATAAGGTTGAAGGTCAACAACAATCTCATATTCATCAGAATCTGATTCAAATCCTTCAAGATCTTTAATACATTTTAAAAAAACAAGTCGTTACAGTTCTAAATGTAAATTCACTATATTATGTTAAACAAATAAAACTAGAGAAGATAAATTTGCCTTCTTGTCCACATATTCAATTCCTAGTACATAGTTTCGCCTCAACATTTGCAGAAAGAATAGAACTTCAAACTTTCTAATGATACGACTTCCGGTGCTAAATGAAAATTCAGAGGCTACTGTAGTGATGGCACACTCAAAATATCACGTGCCATTTATGAAAGTTCTGGATAACTTAGTTTGTTATCCTTCCAAATTCAAGTGCATCTAGATTCTGATTTGTTTTACTATCAATGTTAACTTCTTCCAACTATAACTCTGATTGTGTTTTACTGATACTCGACTCTAATTGACTTTGAAACATATCAAACTCCTTAAATGCTTCAGTGATTTGAATTTCTACTACTACTACAAACATGCTCCTTCAGTAATGAAGTTGACAACGAGGTTGTAGTAAATGGTATGAAGTACTCCTCGAATAATAACTTTAAATTATCTTTGAAAACCTTTACTTTTTGATTAGCCGCGTCAGAAACCATTGCAATAGATAAAATAATGTTATATAACTCCCAAAATTTTAAAACTTCTTTAACATAGAAGTGACCATCTAAGTCATCATTTGATCTTTACTTCTTTTGTGTTCTTCCAATAGCATTTCAATTTTTCATATATTATGAACATAAAAATTTGTTGTGGGGTACTTGCATCTAGAAAATAAAGTTGTGATATCATAGAATGACCTACAAAATGTAGCTACAATCTGAACCTTTTTCCACTCATCTTCAAAAATGTCATGTCTAAAATCAGGATCAACCAAGTCATAATGAATATATGTCTGCTGATACAGAAGAACACTTTCAATCATTTGATAGGTTAAATTTCATTGAATAGGCACAGCTTGGCATAGCTTTTTAGAACATGGTAGACCAAGGTTACTAAGACACTCTGCAAATTTCTCTAGTCTTACTTCTGAATTCTTGATATACTTAACACCATCTCTAATTTTTTTTATCAACTGCATCAATCTTCGCTAAAATCACCTTAACAACTAAGTTAAGAATATAATTTCCACAAGGAACATGAAACAACTTTCCCTCACAAACTAATGAACGCATCAAAGACAAATGATTCTTCAAAACATCAACCACACCTTTATTGCAAGTAGCATTATCTAAAGTAAGGGTAGAGATTTTCTTTTCGTTTCCTCACTCTTTAAGAAAATCAATTAATAAATGACCTAAAACTACACCCGAATGTGGAGGAGGAACATGAAGAAAAATCAAAACCCTTTTCTGTCAAACACACATATAACCACTAGATACTAATGAAATCCACATGTCAGATATCAAACACACTCTACTAGAAATCAATACAAGTTCAACTTTTAGAAGTTCTTTTTTCTCTAGCATTCAAATTTAAGATGTCCGACTTGGTTGTGTTTCTTGATATATGCATCGCTATTGAATTTAAATACGAATGAATATTCCTTGTGCCTTTGTGCTCTACAAAATTAAAAGCATAATTATGCCAACATATATCCAATGACATCTTCTCTCGATGAGTTTTTTGATCTATTGACCGATTTTGACCCTCTTTAGCCTTATCTGGATTATATTTCTCCAGATGATGCTTTAGATTTGTTGTTCCAAATATAGGGCCTATTGCAAATTTTTTTTATAGATCATGCATTAAACTTCATACTATTCGTCAATAGAATTAGACTTAAGTTTAATAAAATAATTTCAAACAACAAATGTTTTCCTTTTTGCTCGTATCAACGAAGTTACAGTACTTCGTTCACAAGACTCTTCATTGCATTCCATTGACATATCACCCTAATTTTACAAATCATAAACAATGAGTCATACATACAAATAACAAAATCAACTCATAAGAGAACAATCAATAAAATAAGAATATGAAATGAACCAAAAGTTACTTTAGCTTTTCACAAACTATGTCTATAATCCAAATCTATTTCACACTATTGAGGGAACTACTTCTTTGTCCTTCAACCTACCATAGACTTCTTTCTTCATTTGAGTTTGAACCAGGTATGCTTATAGAGGCAGGGTTAAGAAGTAGTTGTACGCACGATTAGACGTTATATTTACACATAAATCAACCTTGAAAAAATCACATAGCTCAATCAAACAGACCCCAATTCACTAACTACATCTAAAAGTTGAACTAAAAGAAACAAATAGAAAGTCTACCATCAAATCAATCAAAACAACAAAGCAAAGTATCACAGCAACAACAACAACAAAAATAGAGAAGGAGAAAAGAGAGACGAAGACAGAAGTAAAGGTGAAGGAGAGAGTCTCACCAAAGAAATCACCGGAGCTGAGACAACTTTGATTGATGGAAGATGATGAAAAGCTGAAGCAATTTTGTTCGCGTGTGATTCAAATTTCTACCCTATTTTCTCGTTACAGTAAATGGACTTTCTTTAGAATTTACCCATTTAAGTACTCATATTTTAAATGGGTAATATGAGTTGGACTCATATTTGACTCATTTTAAAAGCATTGGGTACCCACCCAATTTAATGGGTAAAAATAAATGGGTATCCATATTTTTTATTCATTTTGCCATTCCTATACACATATATATACGATATATGACATATATAAATACAATTCACCTATTTTCACTCTCTGTTGTCTCTCACTCGCATCTCTCCTCCTTCTCCCAATCTCTCTCGCATCTCTCTTCTCTATGTCAATCTCGCTCGCCAGATATACATATGTACACCAATTACATTGACAGATATACATATAAAATTGGCATATATACAAATACAGTTTACCTCTCTCCATCCTCTACCCTCTCTCCTCCTTCTCTCAATCTCGTTTATCTTTGTCTTCTCTCTAATATGTAGCTATATATCATAATTAGAAAACTATACCTATAAAGCCTAGCTAAGTTATCTTGTTATGGCTATTTGCGAAATTTCTCCATAATTATATACTCATAAAATTTCTACACGAAATCGTTTGCAATTTAAAAAAATTACATAATTATAATTCATGGTAATTATATAATTTTTTTGGCATTTCTAACAAGTGCGTAATTGTAGCCCAGCTGATTTCTAAGTTAAAAGTCAAAGTGTTATATAAATAATTTCCTTCATTTTCCTCTATCCGCGATCTCCTCTCTGTTTCTCCATTGGCTCTTCCTTCTTCTCCAGCTATCTTCTTCACCTTCAAACTTAGTATTCTGAGTTAATTTTTTCTTCTAAACTTCAATTTTGCATCATTATTGCATAAAATTTTCGAAACTGAATTCAATTTTTTTGTTATTTGCTAAAGAAATTATCGTTTCTGATCAAATAGGAGGATTCGGAGGTTAGATTTCAGGCGTTTTCAGGTATGCATTTCTAGATTGTTGTATTTAGATTCACATTGCCGTAATTCTGTTTGTATTTGTGAATTTTCATTTGCCAATTTCTTAAATATCCATATTCTTGTTGTTGAATATTTCGCGTTGTGTATGTTATATAATATCTTCATCAGTATTTTCTAGGGTTCGCTCACTTATCATTGTAACTTGTGTAGATGTGTTTTGAACAGAACCAGAAATTTTGATAAGTAATTTCGTAAGGATCTACGAATTGTCTTGTTTTCTGGGTTTTTGTTAATGCATTTTTTTAATGTTAAATAATTCCTTTTTTTAATTTTTAAAAACTAGCATTTGGAACTAGTTTTGACTTTATAAGTTAACACTACTTGAGGGGACAAAGACCATCGATGAATCTGCTGCAATCTGAACTTCAGTAGTTGATGTGTGCTTACGGAAAAAGTAGCTCGGTGCTTTGTTCAAAACTGAAGTGATTAGGAACAAAACCAACATTATTTCTTTGATGTTCAGATGAGTATAAATATTCAAGTAATTCATGAGAATTCAAAGAACAGCTCTAGAATTCTAGAAACAGGTATTTGGTTATATTGGATCATCCAAAAATGCAGCTGGACACATGTCAGGTTCTCCGAAAATGGGTAACTTTTGGACGATCTGACATGCAAAGGATCTAAGCAAGTAATATGTTAGAAGAGAGCAGCATATGCCCTCACTTAAATGCTTCCATCACCACCTATAGATAGAGGTGGTCATTTTGAGTTATGATCAAGCAAGAAGTGAGCAATCAAGAAAGAACGTGTAAGAGAAAATGTGATAAATAAGAAAGAGCAACAATTAGAGCTGCTACAGTGTGAGCAAAGGGAAAAATTGCATTGAAAAGATTTATAAGACCGAAGTTGCTTTGTAGTTTGAAATGATAACATTCAAGTTGGGAGAAACTACTTGTATTCAACATTAAGATGCAGGGTTAAATGGAGGTTAAAAAGATCTTATAGATGGCAAAGGCAGGGTCAGCTTGGTCATGAAATTAGGTGGGGGAACCCAAAAAGGGCCCTTGGATATGGAGAAGGAAGCTAAAGGAAGTATATCTTCTGCTGATCTAGGAGGAATCTCAAATGTTGACAATTTGATTGTAATTTCATACAAAGGAAGGTTTTTCTTTATCATGCATCTCAAATGATAAGAAGGTTTTACATCTCATATCTGTACTAATTAATGATAAAGGGGACATAGAAGTAGTTTTGGACTTAATTTTACTGTGAGCCTACAACACCCTCATTACCCCCTATATAGATAAGAAGAGAGGGTAACTGTAAGAGTGTTAGTTTCCTTTTGATTCTCTCTCTCTCTATCACTTCTACTTATTTTTTTTGTTTCAAGCTTGTATTTCTACTTAATTAACTCAAACAAACTTTACAGCATAATTGGTGGCTAGTAGAAAATTATTGTCTATCTGTCATGGAGGTGGCTTCTTATATATTTCTGTTGTAAATTTTTGTTGTCTATATCAGGAGTCTAAAATTGTCCTGTGAATCTCTAATCAATTTCTTTCCACCAGAACACTATTTTCCAGTCTTGCTTTAAACATTTCCCTTTCAGCTATTTCAGATTCTAAACTGAAGTGAACAGAACATCCATTATGCTGGAATGACTTCAAGTACATAAGATCCTATGCATTGAGGATGAAGGGAGGTTTAAAGGTTCCACTGATCTCTCTCATCCTTATTGGATTTGTCTGCGCCAGTATTATTATTTTGGCATACGTGAAAAGCCCTTTTCTCTCTTATTGGACATCATCTCAAGACCGTGTCTTCCAGATTTCTCCAGGTTTGGCATAAATTCTCTTTTGACATTTTCCATACCATTGGTAATTCATTTTCCACTTTAAATTAGCAAATATGTTGACCCATTTGAAGATAAGGTAGTGTATATTAGGTCATAAAAGTTGCTGTTATTTGGCAGTTCAACCTTTTTATTTTTGTGAGAAAAAATCTCTTTGCATCTGTTTAGTGGTATGAAGCATTCTTTTACTGAGATGCAGTTACGAGCCAGTGGTTGCATAAAACTCAATACCACTGGAGCAGCCATTGTAGATAACACGTACCAGAACAAATCATGTCTAAATAAACAAAGGTGTTTTATTTACGCTGGATCACATTGCTGTATTCGAGTTGAGATGACATGAAACTTGGCAGAAGCTCTTTGTTGTGGATACCTCTCACCTGGTTGATCTGCTTGAATTATGCTAAAACATAAAGCTTCTTTTCTCAACTTTTTCCCAGTAAATTATGATATCATCTGTTTCTTCAACAACTTTAAGTAATAAGGCTACTAATCTAAATTCCCCACTTAGTGGATACGTCCCATTAAAGATCCTACCTTGACTTTTCTAGGTATTGAGAGTGGAATGTTTGGATTAGTTGTCTTATGCATTTTGGTGCATAAGTGTTCTAACATAATGTTTCAAATATAAAAAAGTTGAATATTAATCGATCGGATGTCATGTAGAGTTTGAAACAATAAAATATAGTATGATTTGACATCAATTTAAATGTTGGAGGGAGGAAAAAGCTTTCCTCTTTAAGGTACGTAGTTGTTTTGGGACAAACCAAAAAGTTAAATAGAACTTGATGGAAATGTTGCCAAATCCTATTGGAGCACTTATCTATTCTTTGTTTCTCTAGCAGATTATAAAGTGAAAGATGAAGAAGTTTTAAAAGAAAGAAATAGATCAGGGCAATCAGAAGAAAATGTGAACTTTGAATCTGCCATTTCACACTCTTCAATGAAGGATAAGGTGACTGAAGAACCAATTACTAATACTGAGATCGAAGGTACAGTATGTTCGAGTACTATCTTTCATTTTCCTGCGTGCCTCAAATCATGAAGAATTAGTGGTAATAGTACAGTAATGTGTCAGTTTTCTATCCTTCAAATGTGAACTTCCCTTTTCCTGAGTTGTATGAATAAAATAGCTCCTAATCTGCTTATTGTATTACTGAATCTGTTGCTTCCAGCTCCTCAACTTTTATTAATGCTTACCAAAGTGTGAGTTTTAGGGGGGGGGGGGGTTGCCCTTCTCCGAACCCTGCTAACTTGAGATGCTTTGTGCACCCGGTTCCTTTTTACAGTGTTATTTCTTTGCAGTAAAGAACTATTTTCACTGGTATCTATTCATGTTTTGTACTATCCTTGTACTCTGAGATACCATTGTGGTTAATCAATCACTAGTCTCCACAGCTTCATGTTTTTATGGTCCTTTTCAGGAAGTGTAGGTATTCCTCTCAACTTTACCCAAAAAGGAGGAGATTTAAAAGCCTTGGGAGAAAAAAATAGTTCAAGAGAACAGGAAAATGAAGTCGCTGCTCCACTGGATTCTGCAGGCGTCGCTATAGAAAATATGACATCTGATTCAAAAGATCATGGTGATTATCATTCTATTTGATTCTTTGGTTCCTGCTCTTTAATGTTATTTATCTGTAAATTTTATCTTAATGTTCACAAAACTTGAATCTTGATGGATTTGAGTCATTTGATTTAAATGTCTTTGAATTAAATCCTAATTTCTTTCCTTATATAATTTTTTCACTCTTTCTTTGGTTCTGGATAATCTGAAAAATGGTCTTGTTTGCCAAGCGACGTATCCTTAATTGTTTGGTGAATTTGTTACAACGGTTAGTAAGTAGTTAGTTACTAATACCTTATCTTAATTTCCAGGTTGTAATTATGCTAAAGGTAGATGGGTCACAGATGATAGTCGGCCTTTATATTCTGGATTTCGCTGCAAGCGGTGGTTGTCAGCCATGTGGGCTTGCCGCTTGACACAGCGTACGGATTTTGAATACGAGAAACTACGTTGGAGACCAAGGGATTGCGAGATCGAAGAGTTTACAGGTGTTAAATTCCTGAAAAGGTATATTCTTTTTTTCTGAAACTGATCAACATCTGATGCTTGCAATATGTATAACCTAAGAAAAATTCTTATGAGCTCTATTAGAACTTTCTCTCTTTTTCTGAGTAGCATAAGTACTGTACCTACCATGTCTTGTCATGTATTTTCCTAGAGCAGAAGAGTGAGCTTGACTGAACCCACCCAACAGATTAGCACTTATATCGCACATAAACTGCAAGAAATTGTGACTATGGAACTCCATTATGTAGCGCTTGTTGTCCTCATCTCTCGCACATCCTAATGTCTGAATAGAGAAAATTCTTTTTGGACAACTTTTCCACGTCTAAGTTTCTTGTTGCATAGAAATATTGCAGTCTTCTCTCTTCCTCAAGTCTTCATGTGATACTTAGTTGACTTCATGACTCTTTCTACATGGAATTTTCTGAACTTGGTTGTGGATCTAGGATGGAGAACAAAACTCTGGCCTTCATTGGGGATTCCCTTGGCAGACAACAATTCCAGTCGCTTATGTGTATGATTACTGGTGGTGAAGACAGACCTGATGTTCTTGACGTGGGACGTGAATATGGTCTTGTAAAGGCTCGTCATGCTGTACGACCTGATGGATGGGCTTATCGATTTCCAAGGACCCAAACAACTATTCTTTACTATTGGTCTGCTAGTTTGTGTAACTTGACACCCATTAATGCCTCTAACCCTCTTACTGATTATGCCATGCACCTGGATCGTCCACCTGCATTTTTAAGTCGTTTCCTACCCAGATTTGATGTCCTTGTTCTTAACACAGGACACCATTGGAATAGAGGCAAGCTTAACGCCAACCGATGGGTCATGTATGTGGATGGTGTTCCTAACACGAACAGGAAAATAGCAGATATTAATGGTGCCAAGAATCTTACAATTCACAGTATCATTAAATGGGTAGATTCACAGCTGCCAAAATACCCTGGTCTTAAAGCATTTTACCGGTCTATATCGCCCAGACATTTTTTTAATGGAGATTGGAACACTGGAGGCACCTGTGATAACACCACTCCGCTTTCTGGTGGAAAGGAGGTTGTACAAGACGAATCTAGTGATGCTGGTGCAGCAGCGGCTGTAAAAGGAACAGCTGTGAAGCTTTTGGACATCACAGCTTTGTCTCAGCTGAGAGATGAAGGTCATATATCTCGATACAGCATCAGATCAACACCTGGAATGCAGGATTGTTTGCATTGGTGCTTGCCTGGTGTTCCAGATACATGGAATGAAGTTCTTTTTGCTCAACTTTAATATTGCAAGACCGGCAAGGAACCAGTGCTTCAACATTGATCTCTTCAACACTAGTGCAACATGAATTGAATTGAATAATGTCTTGGATGATTTTGGCAATTGGAGCTTGACAAGTTGGATTCAGCTTTGATACATGGGGATTGCTGATCAGACAGCAGTTTGCACCATATTTTAGGAGTAGATGAGTTATACATTATTTTTGGAATTTATAGTTTGGTTTGTCCTACCATTTGTTAGAGACTAGATTCTTTGAGGGGTTGGGGTACGGAAGAGGCTTGACCCTTGACATGTACGGTGAGTTTGTAAGACATGAGAGTGTACTTGGAAGAACAACACAAGGGGATTTTTCTAGTGATCAGATGATGCTTAAATCCTAATTCATTTTTATCCTTTTATTTATAAAAATCACGACCACCTAAATTTTTCTATTTTATCTTGTTAATTTTTCAAAACCTTGCAGGCTAAAGCTACTATAACATAGTCTTTAAAGCTTAGAAAGAGGAGAAAACAGAAAAATCCATATATAAGACTACTCATTACTCCCTAGTTATGACATTATTGTTTATGTTTCAGTTTCTAACCCAAAAACTTACCGGATGTAACATATATGTTAAATATATATATACCTATATATAAAGACATAAAAAGTTGTTTTGAATTTTCAATAAAAACACCTTAATTTTGCAACTTTTCTATTATTCCACTAAACAATTTTGAATAGATATTATTATATCTTTTTCGCGTCCACCTGACATAGAGAGTGATGTTCACTCTCTCAAAGAGAGTGAACAGTCTAAAATAACTAATATAATTTTATTTTTACAAGTATTTTATTATACAATATATTTTCTTATTTTTCTTGTTATTTTAACTTTTTTTCCTTTTTATTTTTTCTCTTTCTTTCTTCTTTCTTTTCATGAGTTCATTGACATTTCCTTCCATTGAAGCTTCTTAATTTCAATGTCATTATTTCTACTATAACTTCACCTTTTTTCTTCTTTTTTTTTTAGTTTTACTCTCTTTAAATTTAAAACTTTATCTAAATATTTTTTTACATTTCGAACAATTTGATAAGCTCATTAGATTTCAAGATGATTAGGAAGTATCATATAGTTTTTTTTATCCGATTTAAAATAAGTTCTTTCAATTTTTGGTAAATTAATTGATTCTTATAAAATTATCATTTCTAATTTTGAATTTATATGAAAATGATTAGTTGATGATACCTTCAAAATTTTAAATTTTCTTAGAAAAATAATTAATTTTGTTATCAATTGTTCAATAAAGTCTAAATAATAGTATGAATTCTATAAAGAATTTGACCCGAGAAAAATAAGAAAATGAAAAGAAAAAAATGGAAGTGAAGTTCAATTTGACAGGGGGTGGAGGTTAAGAAAAAAAAAATGGAGGGATGAATCACTTGAAAGTTGGAGGTAGAAGATAAAATGAAATTTAAGATATATCAAAAGTAAGAGAGAGAAACAAAGAAAGAAAAAGATAAAGGATAAACTTAAATTGAAAAAAAATATTACATTTTTAATTAAATTAGCACGTGTTATGTAATGATTAGTGCGTGAACTCACTAGCTTCTTAAAATTTGGGGCTGATCGAAAAATAGTATAATAATATTTGTTCATAATTGTTTAGTGGGGTAATAGGACAGTCGCAAAGTTTAAGTGTCTCTTTATGAGAATTCAGGACAACTTCAATGGTGACTTTATGTCTTTTCTAAATAAAAAAAAACAAATATACTAATGTATTAATAATAATAAATCGAATAGTTCCGTCCCACAAGTATAACTTGAATATTGTGTTCAATTTGTACTTGTGTATCAATAACAGAGTCTATTATTTCTTTCCTATAATGAGTCGATCGATCCTAATATCATTTATGAGAAGTCGGTTAACAAAGCCTCCTCCTAGGATAAAAATGTCTCACTACTCTCCAGGGTGAGGGACAAAAGAACTGAATTAAAATAACTCCTAACTAATTAATTTACAATATTTTTCCCTTTAAATGTAGTGTTTAGTAATGGGTAATTATTAATTCTTGATTTTCTCCTTATTAGTTGGTCACTGTTTTAGTTATTATTAATCTCCTAATTGTATTAATTTCCTATTTTGATTCTTTCTTCCTCCCTTTTAGCTGCCAAATCTTTTTAAAATTTCATGGTAGAATATATACGTAGATTAGATGTATTTTTTTAAGGAAAAGTTACCTAATATGCATTCTTTTTTACGCTATTTTCTTACGATTTCAAAAATTACAAAATCTCATTCTCTTAATTGATACATAAGACTCCACCATTTTCTCCCCCTTTTCATCACCACTTACATCCATCTTTCAATTTTTTATTTCAATTAATCTTCTCTTTCCAATCAATTGATTTAAAGTTTGAAGAGGTATTTTCTTCTGATGATGTTTCATTTTTTTAGTATTGAAATTATCCAATTATTTTCAAAAAAAGAATAATGTGGGTCGTATTTTTTATTTTGACGACGAAGGATTTGTTGAAATGATCTAAACAATGAAGCCAAAATCTCTATTCATGAAGTTTCTGAGTTTAGAGAAGTCAAAGTCGAAGAAGGATGCACCTTTGACTTGTAAAGCTAATGTGGAAAAAAAGTTGGATCTACGTTATCATACATTGCATCAATTTCAAGTTATTTAAGAGGCACATCTCTTTCTATTACTTCAGATTTTTGGTAAGATTCATGGGACAAGTCATTGTTGCAAGTGAAAAAAAAGCTAGAAGAGTCGATACAGAGCAAAAGAGAAAGTCTAGAAGAATTTCTAAAGTTATATTAATTTAATAGGATAGTGACTTAAAAAATTATTTTGTAGAGATCAATTTGGAAACAAGTAAGAAATTGATTATTTTTTATTGAACCATTTTCATTTACTATCTTGAATATTTTAGTAGTTTTATAGAAATTATCTTAATAAATAATGTTCGTTCTATCACTCTTATAAAATATATAAAGTTACAATAAATTTGAACCTACAAAAAATTACATATACCCGCAACCCGCTCCATCCGGTACTAATTTTAAAACAAACCCATTTCAACTCGCCCTGCATTCTACCGGTCCTGTACAACCTTAAACCCGCTCCGCTCCATTACCATCCCTAAAATTTAAAAACAAAAATTCATACTTAATACATAGGAACCAAAAGATTCTTCTAAACGTGTTTTTTCTTTTTATTTGTCAAAACATTAATTGTTTAAAATATTTTAATTTTCTTTATGCCATAATATGTTTAATGCCCTTCGTACAACTCAATACCTTAACTACCACAAACTACACCAAAATTGAATTGGGGGTACACCACTAAAAATTTTTTCACCCATAAATCAAAAATTTCCGGGTCTAAATACCAAAAAAATTTTACTGGAAAATACTACCCCCAAAAAGAACCTAAAGGGAAGCAATTCCCAAATGTTGGGTTTGCAAAACCCAAATAAAAAAAACCTTTTTTTTTTAAAAAAAAAATAAAAAAAAACCCATAAAAAGAAAAAAAAAAAAAAAATTTTAAAAAAAAAAAAAAAAAAAATTATTTCCTTCTCTTGTTTTAATAAATTTTCCCCAGAGGGAAAAAAATAAAAACCCAAAAATATTTTTTTTTCAAAAGAGGTTAATATATTTTTTTTTCTCATACTTTTTATTTTTTTTCTCTATAAGAAGGTGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGAGGAGGAGGGAGGTTATTTGGAGACACAAAGGAGGTGGAAACCCAGAGTGGTTTGTAAATAGTTATAATTTTTATGATTGTTTATAGGAAGTGGTGGGGGTTTTGAGATGTAAAATAAAAAGAGAGCTCTTTAGAAAAAAAAAAGGGGTGAAATCCCCCCCTCTCCTAAAATAATCCAATTAGAAAAACCGGTGAAATTTTTTGTACCATGAGTATTTTTTGAACTTAAATTTGTTATTTTTAAGGATTTTTTTTACCATTATTTTTTTTTACTGGACGGATTGGCACAAAAAAAGTTACAAAAAAAAGGAGTTTTTTTTTTTGAGAATACCCGGCATGATTATTGATAAGGAATTAGAAAAAGGCAAAAGTTATCAATGAATTAACCCACCAACCCCAAAGGGAAAGGTAGGAAGCTTTTTGGATAAAAAAGAGAAATTTTAGCTTTTTTTCTACATCTAGCATTTTTGAGTAGCCAATTGTTAAATTTTTTTCTAATTTTATATGGGACATTTGAATTTCTCTTTACTGGTATCGACTTGAAGTCATGCCATATGCAGTAAAACAATGAAATTCCCGACCGCAATAGGCATAAATAGTCTAGCGATTGTCACCCATTGTAGTTTTTCTTTAACCAAAGCATAATGAAGCAGGTTTCCACTGCTCCTACGAAGATTGAAGAGCCTAAAATACAGAAGGAGACATTGCTACAGAATCTGGGGGCTGGTTTTGGTAACTACAGTGCTACAAATGAAAATATTTCTCCTGGAACCACCGAGACAAAACCTGAGACAGCCGAGTTTCTAGCGAAGGCAGCATCTAATTGTTGTGGAAAGACATGTGAAATATGCTGTTGTATGTGCTGTATACGGACATGTTCGAAAATGAATGATCAATGTGCAATCGTGCTGACACAGTTCCTGGGTTCCTTGGCATGCTTAGGTTGCTTCGCTTGCTGTGAATTATGCTGTTCCGTTAATGATGGATGAGAAAGTTATTGCATAGCTTCCTTGCAATCTTGTTGTATACAGTTTCTTACATAGTACAAGGTTTACATTTTGTGTATCATGGTTTCTTGTGAATAGTATGTATTTATATACATACAAGTTTTACCAATTGCTTTACTGTAATGATGTAGAAATATAACATTTGCATGTTTCATAATCAGAGAAGAATAATGT-TAAACTAGA-CATGATTATTTGCCGGACAA</genome_strand>
        <mrna_strand>TAAATTTTCAATAGGTCTTTCCCACTCCAGTTCCCCATCTTTCATCCAAAGGTTCATTAGTGTTGTCAGGCAGATACCGAGGAGTATTCCCTGACACGCTTAAAGCTAAAGGAGTCCTTGCAGACTTGAGTAACTTCTCCCTGGATCTGAAAGCTATACAGACAAAGGACATACCTCTTGATAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTAGCAAGGCAAC-AGATTGAACTACTTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT-G-CTCAGGCCTGGTTGACTGAAAATAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-GACC-TT-GAACAGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA-TAGCAC-AAACAAG-TA-TACAGAATGGCG---TCATTTCTGAGTATACAC-GCATGA-TATTGAT-AGAGACT-GATAAAGGC-AAAGTAATCACTGAATCAA-CCACCAACACC-AAGCGAAAG.....................................................................................................................................................................................................................................................GTTTCCACTGCTCCTACGAAGATTGAAGAGCCTAAATTACAGAAGAAGACATTGCTACAGAATCTCGGGGCTGGTTTTGGTAACTACAGTGCTACAAATGAAAATATTTCTCCTGGAACCACCGAGACAAAACCTGAAACAGCAGAGATTCTAGCGAAGGCAGCGTCTAATTGTTGTGGAAAGACATGTGAGATATGCTGTTGTATGTGCTGCATACGGACATGTTCGAAAATGAACGATCAATGTGCAATCGTGCTGACACAGTTCCTGGGTTCCTTGGCATGCTTAGGTTGCTTCGCTTGCTGTGAATTATGCTGTTCCGTAAATGATGGATGAGAAAGTTATTGCATAGCTTCCCTGCAATCTTGTTGTATACAGTTTCATACATAGTAC-------A-A-TTTGTGTATCATGGTTTTTTGTGAATAGTATGTATTTATATACATACAAGTTTTACCAATTGCTTTACTGTAATGATGTAGAAATATAACATTTTCATGTTTGATAATCAGAGAAGAATGATGTCTAAAAGGGAGCATGATTATTTGCCGGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U332908" ref_strand="+" ref_description="SGN-U332908        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: AT5G20680.1 | Symbol: None | expressed protein, predicted proteins, Arabidopsis thaliana | chr5:6998105-7001912 FORWARD | Aliases: T1M15.80, T1M15_80 (evalue: 3e-09, score=58.2) genbank/nr: gi|77549530|gb|ABA92327.1| expressed protein [Oryza sativa (japonica cultivar-group)] (evalue: 1e-07, score=58.5)">
      <seq>tcaacacctggaatgcaggattgtttgcattggtgcttgcctggtgttccagatacatggaatgaagttctttttgctcaactttaatattgcaagaccggcaaggaaccagtgcttcaacattgatctcttcaacactagtgcaacatgaattgaattgaataatgtcttggatgattttggcaattggagcttgacaagttggattcagctttgatacatggggattgctgatcagacagcagtttgcaccatattttaggagtagatgagttatacattatttttggaatttatagtttggtttgtcctaccatttgttagagactagattctttgaggggttggggtacggaagaggcttgacccttgacatgtacggtgagtttgtaagacatgagagtgtacttggaagaacaacacaaggggatttttctagtgatcagatgatgcttaaatcctaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="14876" stop="10634"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14576" g_stop="14114" g_length="463"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="463" r_length="463" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14113" i_stop="10982" i_length="3132">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10981" g_stop="10934" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="464" r_stop="511" r_length="48" r_score="0.875"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-U332908" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>511</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U332908" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14576" e_stop="14114"/>
          <exon e_start="10981" e_stop="10934"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAACACCTGGAATGCAGGATTGTTTGCATTGGTGCTTGCCTGGTGTTCCAGATACATGGAATGAAGTTCTTTTTGCTCAACTTTAATATTGCAAGACCGGCAAGGAACCAGTGCTTCAACATTGATCTCTTCAACACTAGTGCAACATGAATTGAATTGAATAATGTCTTGGATGATTTTGGCAATTGGAGCTTGACAAGTTGGATTCAGCTTTGATACATGGGGATTGCTGATCAGACAGCAGTTTGCACCATATTTTAGGAGTAGATGAGTTATACATTATTTTTGGAATTTATAGTTTGGTTTGTCCTACCATTTGTTAGAGACTAGATTCTTTGAGGGGTTGGGGTACGGAAGAGGCTTGACCCTTGACATGTACGGTGAGTTTGTAAGACATGAGAGTGTACTTGGAAGAACAACACAAGGGGATTTTTCTAGTGATCAGATGATGCTTAAATCCTAATTCATTTTTATCCTTTTATTTATAAAAATCACGACCACCTAAATTTTTCTATTTTATCTTGTTAATTTTTCAAAACCTTGCAGGCTAAAGCTACTATAACATAGTCTTTAAAGCTTAGAAAGAGGAGAAAACAGAAAAATCCATATATAAGACTACTCATTACTCCCTAGTTATGACATTATTGTTTATGTTTCAGTTTCTAACCCAAAAACTTACCGGATGTAACATATATGTTAAATATATATATACCTATATATAAAGACATAAAAAGTTGTTTTGAATTTTCAATAAAAACACCTTAATTTTGCAACTTTTCTATTATTCCACTAAACAATTTTGAATAGATATTATTATATCTTTTTCGCGTCCACCTGACATAGAGAGTGATGTTCACTCTCTCAAAGAGAGTGAACAGTCTAAAATAACTAATATAATTTTATTTTTACAAGTATTTTATTATACAATATATTTTCTTATTTTTCTTGTTATTTTAACTTTTTTTCCTTTTTATTTTTTCTCTTTCTTTCTTCTTTCTTTTCATGAGTTCATTGACATTTCCTTCCATTGAAGCTTCTTAATTTCAATGTCATTATTTCTACTATAACTTCACCTTTTTTCTTCTTTTTTTTTTAGTTTTACTCTCTTTAAATTTAAAACTTTATCTAAATATTTTTTTACATTTCGAACAATTTGATAAGCTCATTAGATTTCAAGATGATTAGGAAGTATCATATAGTTTTTTTTATCCGATTTAAAATAAGTTCTTTCAATTTTTGGTAAATTAATTGATTCTTATAAAATTATCATTTCTAATTTTGAATTTATATGAAAATGATTAGTTGATGATACCTTCAAAATTTTAAATTTTCTTAGAAAAATAATTAATTTTGTTATCAATTGTTCAATAAAGTCTAAATAATAGTATGAATTCTATAAAGAATTTGACCCGAGAAAAATAAGAAAATGAAAAGAAAAAAATGGAAGTGAAGTTCAATTTGACAGGGGGTGGAGGTTAAGAAAAAAAAAATGGAGGGATGAATCACTTGAAAGTTGGAGGTAGAAGATAAAATGAAATTTAAGATATATCAAAAGTAAGAGAGAGAAACAAAGAAAGAAAAAGATAAAGGATAAACTTAAATTGAAAAAAAATATTACATTTTTAATTAAATTAGCACGTGTTATGTAATGATTAGTGCGTGAACTCACTAGCTTCTTAAAATTTGGGGCTGATCGAAAAATAGTATAATAATATTTGTTCATAATTGTTTAGTGGGGTAATAGGACAGTCGCAAAGTTTAAGTGTCTCTTTATGAGAATTCAGGACAACTTCAATGGTGACTTTATGTCTTTTCTAAATAAAAAAAAACAAATATACTAATGTATTAATAATAATAAATCGAATAGTTCCGTCCCACAAGTATAACTTGAATATTGTGTTCAATTTGTACTTGTGTATCAATAACAGAGTCTATTATTTCTTTCCTATAATGAGTCGATCGATCCTAATATCATTTATGAGAAGTCGGTTAACAAAGCCTCCTCCTAGGATAAAAATGTCTCACTACTCTCCAGGGTGAGGGACAAAAGAACTGAATTAAAATAACTCCTAACTAATTAATTTACAATATTTTTCCCTTTAAATGTAGTGTTTAGTAATGGGTAATTATTAATTCTTGATTTTCTCCTTATTAGTTGGTCACTGTTTTAGTTATTATTAATCTCCTAATTGTATTAATTTCCTATTTTGATTCTTTCTTCCTCCCTTTTAGCTGCCAAATCTTTTTAAAATTTCATGGTAGAATATATACGTAGATTAGATGTATTTTTTTAAGGAAAAGTTACCTAATATGCATTCTTTTTTACGCTATTTTCTTACGATTTCAAAAATTACAAAATCTCATTCTCTTAATTGATACATAAGACTCCACCATTTTCTCCCCCTTTTCATCACCACTTACATCCATCTTTCAATTTTTTATTTCAATTAATCTTCTCTTTCCAATCAATTGATTTAAAGTTTGAAGAGGTATTTTCTTCTGATGATGTTTCATTTTTTTAGTATTGAAATTATCCAATTATTTTCAAAAAAAGAATAATGTGGGTCGTATTTTTTATTTTGACGACGAAGGATTTGTTGAAATGATCTAAACAATGAAGCCAAAATCTCTATTCATGAAGTTTCTGAGTTTAGAGAAGTCAAAGTCGAAGAAGGATGCACCTTTGACTTGTAAAGCTAATGTGGAAAAAAAGTTGGATCTACGTTATCATACATTGCATCAATTTCAAGTTATTTAAGAGGCACATCTCTTTCTATTACTTCAGATTTTTGGTAAGATTCATGGGACAAGTCATTGTTGCAAGTGAAAAAAAAGCTAGAAGAGTCGATACAGAGCAAAAGAGAAAGTCTAGAAGAATTTCTAAAGTTATATTAATTTAATAGGATAGTGACTTAAAAAATTATTTTGTAGAGATCAATTTGGAAACAAGTAAGAAATTGATTATTTTTTATTGAACCATTTTCATTTACTATCTTGAATATTTTAGTAGTTTTATAGAAATTATCTTAATAAATAATGTTCGTTCTATCACTCTTATAAAATATATAAAGTTACAATAAATTTGAACCTACAAAAAATTACATATACCCGCAACCCGCTCCATCCGGTACTAATTTTAAAACAAACCCATTTCAACTCGCCCTGCATTCTACCGGTCCTGTACAACCTTAAACCCGCTCCGCTCCATTACCATCCCTAAAATTTAAAAACAAAAATTCATACTTAATACATAGGAACCAAAAGATTCTTCTAAACGTGTTTTTTCTTTTTATTTGTCAAAACATTAATTGTTTAAAATATTTTAATTTTCTTTATGCCATAATATGTTTAATGCCCTTCGTACAACTCAATACCTTAACTACCACAAACTACACCAAAATTGAATTGGGGGTACACCACTAAAAATTTTTTCACCCATAAATCAAAAATTTCCGGGTCTAAATACCAAAAAAATTTTACTGGAAAATACTACCCCCAAAAAGAACCTAAAGGGAAGCAATTCCCAAATGTTGGGTTTGCAAAACCCAAATAAAAAAAACCTTTTTTTTTTAAAAAAAAAATAAAAAAAAACCCATAAAAAGAAAAAAAAAAAAAAAATTTTAAAAAAAAAAAAAAAAAAAA</genome_strand>
        <mrna_strand>TCAACACCTGGAATGCAGGATTGTTTGCATTGGTGCTTGCCTGGTGTTCCAGATACATGGAATGAAGTTCTTTTTGCTCAACTTTAATATTGCAAGACCGGCAAGGAACCAGTGCTTCAACATTGATCTCTTCAACACTAGTGCAACATGAATTGAATTGAATAATGTCTTGGATGATTTTGGCAATTGGAGCTTGACAAGTTGGATTCAGCTTTGATACATGGGGATTGCTGATCAGACAGCAGTTTGCACCATATTTTAGGAGTAGATGAGTTATACATTATTTTTGGAATTTATAGTTTGGTTTGTCCTACCATTTGTTAGAGACTAGATTCTTTGAGGGGTTGGGGTACGGAAGAGGCTTGACCCTTGACATGTACGGTGAGTTTGTAAGACATGAGAGTGTACTTGGAAGAACAACACAAGGGGATTTTTCTAGTGATCAGATGATGCTTAAATCCTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U346224" ref_strand="+" ref_description="SGN-U346224        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT5G20680.1 | Symbol: None | expressed protein, predicted proteins, Arabidopsis thaliana | chr5:6998105-7001912 FORWARD | Aliases: T1M15.80, T1M15_80 (evalue: 2e-87, score=318) genbank/nr: gi|15810385|gb|AAL07080.1| unknown protein [Arabidopsis thaliana](evalue: 2e-85, score=318)">
      <seq>aaagatcatggttgtaattatgctaaaggtagatgggtcacagatgatagtcggcctttatattctggatttcgctgcaagcggtggttgtcagccatgtgggcttgccgcttgacacagcgtacggattttgaatacgagaaactacgttggagaccaagggattgcgagatcgaagagtttacaggtgttaaattcctgaaaaggatggagaacaaaactctggccttcattggggattcccttggcagacaacaattccagtcgcttatgtgtatgattactggtggtgaagacagacctgatgttcttgacgtgggacgtgaatatggtcttgtaaaggctcgtcatgctgtacgacctgatggatgggcttatcgatttccaaggacccaaacaactattctttactattggtctgctagtttgtgtaacttgacacccattaatgcctctaaccctcttactgattatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="16266" stop="14750"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16259" g_stop="16250" g_length="10"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="10" r_length="10" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16249" i_stop="15958" i_length="292">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15957" g_stop="15762" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="11" r_stop="206" r_length="196" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15761" i_stop="15319" i_length="443">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.904" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="15318" g_stop="15050" g_length="269"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="475" r_length="269" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-U346224" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>475</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U346224" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16259" e_stop="16250"/>
          <exon e_start="15957" e_stop="15762"/>
          <exon e_start="15318" e_stop="15050"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGATCATGGTGATTATCATTCTATTTGATTCTTTGGTTCCTGCTCTTTAATGTTATTTATCTGTAAATTTTATCTTAATGTTCACAAAACTTGAATCTTGATGGATTTGAGTCATTTGATTTAAATGTCTTTGAATTAAATCCTAATTTCTTTCCTTATATAATTTTTTCACTCTTTCTTTGGTTCTGGATAATCTGAAAAATGGTCTTGTTTGCCAAGCGACGTATCCTTAATTGTTTGGTGAATTTGTTACAACGGTTAGTAAGTAGTTAGTTACTAATACCTTATCTTAATTTCCAGGTTGTAATTATGCTAAAGGTAGATGGGTCACAGATGATAGTCGGCCTTTATATTCTGGATTTCGCTGCAAGCGGTGGTTGTCAGCCATGTGGGCTTGCCGCTTGACACAGCGTACGGATTTTGAATACGAGAAACTACGTTGGAGACCAAGGGATTGCGAGATCGAAGAGTTTACAGGTGTTAAATTCCTGAAAAGGTATATTCTTTTTTTCTGAAACTGATCAACATCTGATGCTTGCAATATGTATAACCTAAGAAAAATTCTTATGAGCTCTATTAGAACTTTCTCTCTTTTTCTGAGTAGCATAAGTACTGTACCTACCATGTCTTGTCATGTATTTTCCTAGAGCAGAAGAGTGAGCTTGACTGAACCCACCCAACAGATTAGCACTTATATCGCACATAAACTGCAAGAAATTGTGACTATGGAACTCCATTATGTAGCGCTTGTTGTCCTCATCTCTCGCACATCCTAATGTCTGAATAGAGAAAATTCTTTTTGGACAACTTTTCCACGTCTAAGTTTCTTGTTGCATAGAAATATTGCAGTCTTCTCTCTTCCTCAAGTCTTCATGTGATACTTAGTTGACTTCATGACTCTTTCTACATGGAATTTTCTGAACTTGGTTGTGGATCTAGGATGGAGAACAAAACTCTGGCCTTCATTGGGGATTCCCTTGGCAGACAACAATTCCAGTCGCTTATGTGTATGATTACTGGTGGTGAAGACAGACCTGATGTTCTTGACGTGGGACGTGAATATGGTCTTGTAAAGGCTCGTCATGCTGTACGACCTGATGGATGGGCTTATCGATTTCCAAGGACCCAAACAACTATTCTTTACTATTGGTCTGCTAGTTTGTGTAACTTGACACCCATTAATGCCTCTAACCCTCTTACTGATTATG</genome_strand>
        <mrna_strand>AAAGATCATG....................................................................................................................................................................................................................................................................................................GTTGTAATTATGCTAAAGGTAGATGGGTCACAGATGATAGTCGGCCTTTATATTCTGGATTTCGCTGCAAGCGGTGGTTGTCAGCCATGTGGGCTTGCCGCTTGACACAGCGTACGGATTTTGAATACGAGAAACTACGTTGGAGACCAAGGGATTGCGAGATCGAAGAGTTTACAGGTGTTAAATTCCTGAAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAGAACAAAACTCTGGCCTTCATTGGGGATTCCCTTGGCAGACAACAATTCCAGTCGCTTATGTGTATGATTACTGGTGGTGAAGACAGACCTGATGTTCTTGACGTGGGACGTGAATATGGTCTTGTAAAGGCTCGTCATGCTGTACGACCTGATGGATGGGCTTATCGATTTCCAAGGACCCAAACAACTATTCTTTACTATTGGTCTGCTAGTTTGTGTAACTTGACACCCATTAATGCCTCTAACCCTCTTACTGATTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U324360" ref_strand="+" ref_description="SGN-U324360        Tomato 200607 #1 [6 ESTs aligned]">
      <seq>ctcctctctgtttctccattggctcttccttcttctccagctatcttcttcaccttcaaacttagtattctgagttaattttttcttctaaacttcaattttgcatcattattgcataaaattttcgaaactgaattcaatttttttgttatttgctaaagaaattatcgtttctgatcaaataggaggattcggaggttagatttcaggcgttttcagctatttcagattctaaactgaagtgaacagaacatccattatgctggaatgacttcaagtacataagatcctatgcattgaggatgaagggaggtttaaaggttccactgatctctctcatccttattggatttgtctgcgccagtattattattttggcatacgtgaaaagcccttttctctcttattggacatcatctcaagaccgtgtcttccagatttctccagattataaagtgaaagatgaagaagttttaaaagaaagaaatagatcagggcaatcagaagaaaatgtgaactttgaatctgccatttcacactcttcaatgaaggataaggtgactgaagaaccaattactaatactgagatcgaaggaagtgtaggtattcctctcaactttacccaaaaaggaggagatttaaaagccttgggagaaaaaaatagttcaagagaacaggaaaatgaagtcgctgctccactggattctgcaggcgtcgctatagaaatatgacatctgattcaaagatcatggttgtaatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="20184" stop="15943"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19884" g_stop="19666" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="219" r_length="219" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19665" i_stop="18076" i_length="1590">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.058" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18075" g_stop="17848" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="220" r_stop="447" r_length="228" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17847" i_stop="16988" i_length="860">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.870" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16987" g_stop="16841" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="448" r_stop="594" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="16840" i_stop="16409" i_length="432">
            <donor d_prob="0.898" d_score="1.00"/>
            <acceptor a_prob="0.862" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="16408" g_stop="16250" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="595" r_stop="751" r_length="157" r_score="0.987"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="16249" i_stop="15958" i_length="292">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.986" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="15957" g_stop="15948" g_length="10"/>
          <reference_exon_boundary r_type="cDNA" r_start="752" r_stop="761" r_length="10" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-U324360" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>763</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U324360" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19884" e_stop="19666"/>
          <exon e_start="18075" e_stop="17848"/>
          <exon e_start="16987" e_stop="16841"/>
          <exon e_start="16408" e_stop="16250"/>
          <exon e_start="15957" e_stop="15948"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCTCTCTGTTTCTCCATTGGCTCTTCCTTCTTCTCCAGCTATCTTCTTCACCTTCAAACTTAGTATTCTGAGTTAATTTTTTCTTCTAAACTTCAATTTTGCATCATTATTGCATAAAATTTTCGAAACTGAATTCAATTTTTTTGTTATTTGCTAAAGAAATTATCGTTTCTGATCAAATAGGAGGATTCGGAGGTTAGATTTCAGGCGTTTTCAGGTATGCATTTCTAGATTGTTGTATTTAGATTCACATTGCCGTAATTCTGTTTGTATTTGTGAATTTTCATTTGCCAATTTCTTAAATATCCATATTCTTGTTGTTGAATATTTCGCGTTGTGTATGTTATATAATATCTTCATCAGTATTTTCTAGGGTTCGCTCACTTATCATTGTAACTTGTGTAGATGTGTTTTGAACAGAACCAGAAATTTTGATAAGTAATTTCGTAAGGATCTACGAATTGTCTTGTTTTCTGGGTTTTTGTTAATGCATTTTTTTAATGTTAAATAATTCCTTTTTTTAATTTTTAAAAACTAGCATTTGGAACTAGTTTTGACTTTATAAGTTAACACTACTTGAGGGGACAAAGACCATCGATGAATCTGCTGCAATCTGAACTTCAGTAGTTGATGTGTGCTTACGGAAAAAGTAGCTCGGTGCTTTGTTCAAAACTGAAGTGATTAGGAACAAAACCAACATTATTTCTTTGATGTTCAGATGAGTATAAATATTCAAGTAATTCATGAGAATTCAAAGAACAGCTCTAGAATTCTAGAAACAGGTATTTGGTTATATTGGATCATCCAAAAATGCAGCTGGACACATGTCAGGTTCTCCGAAAATGGGTAACTTTTGGACGATCTGACATGCAAAGGATCTAAGCAAGTAATATGTTAGAAGAGAGCAGCATATGCCCTCACTTAAATGCTTCCATCACCACCTATAGATAGAGGTGGTCATTTTGAGTTATGATCAAGCAAGAAGTGAGCAATCAAGAAAGAACGTGTAAGAGAAAATGTGATAAATAAGAAAGAGCAACAATTAGAGCTGCTACAGTGTGAGCAAAGGGAAAAATTGCATTGAAAAGATTTATAAGACCGAAGTTGCTTTGTAGTTTGAAATGATAACATTCAAGTTGGGAGAAACTACTTGTATTCAACATTAAGATGCAGGGTTAAATGGAGGTTAAAAAGATCTTATAGATGGCAAAGGCAGGGTCAGCTTGGTCATGAAATTAGGTGGGGGAACCCAAAAAGGGCCCTTGGATATGGAGAAGGAAGCTAAAGGAAGTATATCTTCTGCTGATCTAGGAGGAATCTCAAATGTTGACAATTTGATTGTAATTTCATACAAAGGAAGGTTTTTCTTTATCATGCATCTCAAATGATAAGAAGGTTTTACATCTCATATCTGTACTAATTAATGATAAAGGGGACATAGAAGTAGTTTTGGACTTAATTTTACTGTGAGCCTACAACACCCTCATTACCCCCTATATAGATAAGAAGAGAGGGTAACTGTAAGAGTGTTAGTTTCCTTTTGATTCTCTCTCTCTCTATCACTTCTACTTATTTTTTTTGTTTCAAGCTTGTATTTCTACTTAATTAACTCAAACAAACTTTACAGCATAATTGGTGGCTAGTAGAAAATTATTGTCTATCTGTCATGGAGGTGGCTTCTTATATATTTCTGTTGTAAATTTTTGTTGTCTATATCAGGAGTCTAAAATTGTCCTGTGAATCTCTAATCAATTTCTTTCCACCAGAACACTATTTTCCAGTCTTGCTTTAAACATTTCCCTTTCAGCTATTTCAGATTCTAAACTGAAGTGAACAGAACATCCATTATGCTGGAATGACTTCAAGTACATAAGATCCTATGCATTGAGGATGAAGGGAGGTTTAAAGGTTCCACTGATCTCTCTCATCCTTATTGGATTTGTCTGCGCCAGTATTATTATTTTGGCATACGTGAAAAGCCCTTTTCTCTCTTATTGGACATCATCTCAAGACCGTGTCTTCCAGATTTCTCCAGGTTTGGCATAAATTCTCTTTTGACATTTTCCATACCATTGGTAATTCATTTTCCACTTTAAATTAGCAAATATGTTGACCCATTTGAAGATAAGGTAGTGTATATTAGGTCATAAAAGTTGCTGTTATTTGGCAGTTCAACCTTTTTATTTTTGTGAGAAAAAATCTCTTTGCATCTGTTTAGTGGTATGAAGCATTCTTTTACTGAGATGCAGTTACGAGCCAGTGGTTGCATAAAACTCAATACCACTGGAGCAGCCATTGTAGATAACACGTACCAGAACAAATCATGTCTAAATAAACAAAGGTGTTTTATTTACGCTGGATCACATTGCTGTATTCGAGTTGAGATGACATGAAACTTGGCAGAAGCTCTTTGTTGTGGATACCTCTCACCTGGTTGATCTGCTTGAATTATGCTAAAACATAAAGCTTCTTTTCTCAACTTTTTCCCAGTAAATTATGATATCATCTGTTTCTTCAACAACTTTAAGTAATAAGGCTACTAATCTAAATTCCCCACTTAGTGGATACGTCCCATTAAAGATCCTACCTTGACTTTTCTAGGTATTGAGAGTGGAATGTTTGGATTAGTTGTCTTATGCATTTTGGTGCATAAGTGTTCTAACATAATGTTTCAAATATAAAAAAGTTGAATATTAATCGATCGGATGTCATGTAGAGTTTGAAACAATAAAATATAGTATGATTTGACATCAATTTAAATGTTGGAGGGAGGAAAAAGCTTTCCTCTTTAAGGTACGTAGTTGTTTTGGGACAAACCAAAAAGTTAAATAGAACTTGATGGAAATGTTGCCAAATCCTATTGGAGCACTTATCTATTCTTTGTTTCTCTAGCAGATTATAAAGTGAAAGATGAAGAAGTTTTAAAAGAAAGAAATAGATCAGGGCAATCAGAAGAAAATGTGAACTTTGAATCTGCCATTTCACACTCTTCAATGAAGGATAAGGTGACTGAAGAACCAATTACTAATACTGAGATCGAAGGTACAGTATGTTCGAGTACTATCTTTCATTTTCCTGCGTGCCTCAAATCATGAAGAATTAGTGGTAATAGTACAGTAATGTGTCAGTTTTCTATCCTTCAAATGTGAACTTCCCTTTTCCTGAGTTGTATGAATAAAATAGCTCCTAATCTGCTTATTGTATTACTGAATCTGTTGCTTCCAGCTCCTCAACTTTTATTAATGCTTACCAAAGTGTGAGTTTTAGGGGGGGGGGGGGTTGCCCTTCTCCGAACCCTGCTAACTTGAGATGCTTTGTGCACCCGGTTCCTTTTTACAGTGTTATTTCTTTGCAGTAAAGAACTATTTTCACTGGTATCTATTCATGTTTTGTACTATCCTTGTACTCTGAGATACCATTGTGGTTAATCAATCACTAGTCTCCACAGCTTCATGTTTTTATGGTCCTTTTCAGGAAGTGTAGGTATTCCTCTCAACTTTACCCAAAAAGGAGGAGATTTAAAAGCCTTGGGAGAAAAAAATAGTTCAAGAGAACAGGAAAATGAAGTCGCTGCTCCACTGGATTCTGCAGGCGTCGCTATAGAAAATATGACATCTGATTCAAAAGATCATGGTGATTATCATTCTATTTGATTCTTTGGTTCCTGCTCTTTAATGTTATTTATCTGTAAATTTTATCTTAATGTTCACAAAACTTGAATCTTGATGGATTTGAGTCATTTGATTTAAATGTCTTTGAATTAAATCCTAATTTCTTTCCTTATATAATTTTTTCACTCTTTCTTTGGTTCTGGATAATCTGAAAAATGGTCTTGTTTGCCAAGCGACGTATCCTTAATTGTTTGGTGAATTTGTTACAACGGTTAGTAAGTAGTTAGTTACTAATACCTTATCTTAATTTCCAGGTTGTAATTA</genome_strand>
        <mrna_strand>CTCCTCTCTGTTTCTCCATTGGCTCTTCCTTCTTCTCCAGCTATCTTCTTCACCTTCAAACTTAGTATTCTGAGTTAATTTTTTCTTCTAAACTTCAATTTTGCATCATTATTGCATAAAATTTTCGAAACTGAATTCAATTTTTTTGTTATTTGCTAAAGAAATTATCGTTTCTGATCAAATAGGAGGATTCGGAGGTTAGATTTCAGGCGTTTTCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTTCAGATTCTAAACTGAAGTGAACAGAACATCCATTATGCTGGAATGACTTCAAGTACATAAGATCCTATGCATTGAGGATGAAGGGAGGTTTAAAGGTTCCACTGATCTCTCTCATCCTTATTGGATTTGTCTGCGCCAGTATTATTATTTTGGCATACGTGAAAAGCCCTTTTCTCTCTTATTGGACATCATCTCAAGACCGTGTCTTCCAGATTTCTCCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATAAAGTGAAAGATGAAGAAGTTTTAAAAGAAAGAAATAGATCAGGGCAATCAGAAGAAAATGTGAACTTTGAATCTGCCATTTCACACTCTTCAATGAAGGATAAGGTGACTGAAGAACCAATTACTAATACTGAGATCGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTGTAGGTATTCCTCTCAACTTTACCCAAAAAGGAGGAGATTTAAAAGCCTTGGGAGAAAAAAATAGTTCAAGAGAACAGGAAAATGAAGTCGCTGCTCCACTGGATTCTGCAGGCGTCGCTATAG-AAATATGACATCTGATTC-AAAGATCATG....................................................................................................................................................................................................................................................................................................GTTGTAATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U335078" ref_strand="-" ref_description="SGN-U335078        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: hypothetical(evalue: 1e-06, score=56.6)">
      <seq>agtatgtattaagcaatatcataaaattaactaatatccttagcatgcagcatttgcaattaccataacccttggttgcatcaccaagcacatcaatgaggactcacacctcctcatcatacttatttgggaatttagttcattggattgcatatattaacatatttcaagattcatcatatttattcccctcgtgtccttacgtgacactccactcctcaatatactatcctggcaccggaacgtggcacccgatccatattctatcctggtgtcagaacgtgacacccgatccatattctatcctggtgtcggaacgtgacacccgatccatattctatcctggtaccggaacgtggcacccgatccatattctatcctggtgtcggaacgtgacacccgatccatattctatcctggtaccggaacgtggcacccgatcccctaatctcaccactttcgttcatcaagccttcttttataccaaggcatcattattaacaaagtagattagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="67474" stop="59274"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67174" g_stop="66887" g_length="288"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="288" r_length="288" r_score="0.927"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66886" i_stop="66769" i_length="118">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66768" g_stop="66702" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="355" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66701" i_stop="59734" i_length="6968">
            <donor d_prob="0.132" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="59733" g_stop="59574" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="356" r_stop="515" r_length="160" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-U335078" ref_strand="-">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>515</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335078" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="67174" e_stop="66887"/>
          <exon e_start="66768" e_stop="66702"/>
          <exon e_start="59733" e_stop="59574"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTATGTATTAAGCAATATCATAAAATCAACTAATATCCTTAACATGCAGCATTTATAGTTACCATAACCCTTGGTTACAACACCAAGCACATCAATGAGGACTCACACCACCTCATCATACTCATTTGGGAATTTAGTTCATTAGATTGGATATATTATCATATTTCAAGATTCATTATCTTTATTCCCCTCGTGTCGGTACGTGACACTCCGCTCCTCAATATACTATCCTGGTACCAGAACGTGGCACCCGATCCATATTTTATCCTGGTGTCGGAACGTGACACTCCAATCCTCATATACTATCCTGGTACCGGAACGTGGCACCCGATCCATATATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTACCGGAACGTGGCACCCGATCCATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTACCGGAACGTGACACCCGATCCCCTAATCTCACTACTTTCATTCATCAAGCCTTCTTTCATACCAAGGCATCATCATTATCAAAGTAGATTAGGGTTTCTTTTCAAGATTTGGGATTCAATAGCTTCATCATGCTTGTTTATTCATAATTACATAATCACATCATTCATGCAAGCATACAATTAAGCATATAGAAGGGTTTACAATACTACTAACACATATCATTCACTATTAAGAGTTTACTACGAATAGCATGAAATAACCATAACCTACCTCCACCAAAGAATTGAAATCAACAAGCTATCTTCTCAGAATCCTTGCTATCCTCTTCGTTTCTCTCTCTTTCTACTCGTTCTCTTTCTTTTTCTGTCTCTTTTTGTTCTTTCTTATTTTTCTTATTCAAACCCTCTTTCTTTTACCCTAATTAGTTATTATTAAGAATAAAAGATGGCGATAATACCCCACTAATTAACTTAGGGTTACCTCTTTTAACCCCCAAGAATTTGAGTTATTAATATAAACCCACGAAATCTATAATTAAGGAAAGAATAGTCCAAAAACGTCCCTTAAAACGTGTAAGGAAATCCGATTCTGCTTGGGATTTGCGCAACCTGTGACGGGCCATCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGCAAAGTTCAGAGAGTGGATTCTCACTGAAGTCTCCATGACGGTCCGTCACGCCCGTGACGGTCCGTCCTGCCATTCCGTCACGAAGTTCAGAGAGTCGATTTTCAGTACCCAATTTTAGATTTTCTAAGTGTTTTGAAACGAGACCCTGCGACGGTCCATCGTGCCCTTGACGGTCCGTCGTGGGGTCCGTCGCTTCTGCCAGTTTTTCCAGAATTGAAGTCTGTTGCTCAAGACGACTAAACGGATCGTTACATTAGATACCAATTTACCCATTGTTCGTCCCCGAACTATCAAAAGAAGGAAAACAAGGGCGAAAAGGAGTACCTGAATCTGTAAACAGATGTGGGTATTTTTCTTGCATATCCGCCTCCTTCTCCCAAGTGGCTTCTTCAACCGGTCGATTCTTCCATTGCACCTTGATGGACGCAATCTCTCTTGACCTCAACTTGCGAAATTCTCTATCTAAAATAGCAACAGGCTCCTCCTCATAAGACAAGTTCTCATCAAGCAAAACTGAATCCTATCGGATAATGTAATTCCCATCCTCATGGTATCTTTTCAACATCGACACATGGAATACCGGGTGTACTCCGGACAGCCCTGGAGGCAAGGCTAACTCATAAGCCACCTCTCCTACTCACTTAAATACTTCAAATGGTTTAATGTACCTTGGACTTAGTTTACCCCTTTTTCCGAACCGCATCACCCCTTTCATGGGCGAAACCTTCAACAAGACTTGTTCACCTTCCATGAACTCTAAGTCCCTAACCTTTCGATCTGCATATTCTTTTTGTCTACTTTGCGCCGCTAGAAGCTTTTCTTGAATAGACTTCACTTTCTCTATCGAATCTCTCAAAAGGTCAGTACCCCAAGGCCTAACCTCAAATGCATCAAACCAACCAATGGGAGATCTACATCTCCTACCATACAAGGATTCGAATGGAGCCATGTCAATGCTTGAGTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAGGAAGCTATCCCAATGACCACCAAACTCTATCACACACGCACGAAGCATATCCTCCAACACTTGAATTGTCCTTTCAGACTGACCATCGGTCTGAGGATGGAACGCAGTACTAAGGTCCAACCTTGTACCCAATTCCGCATGCAATGTTTTCCAAAACTTAGAAGTAAACTGCGTACCTCTATCTGATATGATGGAGAGTGGAACCCCATGCAATCGCACCACTTCTGAGATGTAAAGTTTGGCTAACTTTTCTGCATTGTAAGTCACCTTGACCGGAATGAAATGAGCTGATTTAGTTAACCTATCAACAATCACCCAAATGGAGTCATACTTAACCATTGTCTTTGGAAGACCAACCACAAAATCCATTGCTATTCTTTCCCACTTCCATTCCGGAATGGGCATTCTCTGAAGTGTTCCTCCGGGCCTTTGGTGTTCATACTTTACTTATTGACAGTTTGGACATTTGGCAATAAAATCCACAATGTCACGCTTCATTCTACTCCACCAAAAGTGTTGTTTTAGGTCACGATACATCTTGGTTGCACCCGGATGTATAGAATACCTTGAACTATGAGCCTCTGTCAGAATAGTGTTGATCAAATCATCGACGCGGGGTACACATACCCTTCCCTTGATTCTCAAAACACCTTCCTCATCGATTTGTGCTTCCTTAGACTCTCCTCGCAATACCTTATCTTGGATTCTTCTTAGTTTCTCATCATCAAACTGTTTTCCCTTAATTTTGTCAAGAAAAGAAGATCTTGACTCCACAGAAGCCAACAATCCTCCCTTCTCATTTACTTCTACTCTCATCAAGTCATTAGCTAGAGTCTGAACCTCTCTAGCCAAAGGGCGTCTAGAAGCTTGCAAGTGAGCTAGACTTCCCATGCTTCCCGCCTTTCTACTTAAAGTATCCGCTACAACATTCGCCTTTCCCGGATGATACAAGATAGTGATATCGTTGTCCTTTAGTAACTCCATCCATCTCCTCTATCTTAAGTTCAAATCTTTCTGAGTAAAGACATACTGTAGGCTACGATGATCCGTATAGATCTCACACTTAACCCCATACAAATAGTGTCTCCATTGCTTTAATGCAAACACCACCGCAGCCAATTCCAAATCGTGGGTCGGATAGTTACGTTCATGAACCTTTAGTTGCCTTGAGGCATAAGCAATCACACTCTTCTCTTGCATTAGTACTGCACCCAAACCAGAATAGGATGCATCACAATAAACAATGAAGTTCTTACCCTCTACTGGCAAGGTAAGGATAGGTGCGGTAGTCAACAAAGTCTTGAGCTTCTGAAAGCTTTCCTCACACTCATCCGACCATACAAATGGAACATTCTGCTTAGTCAAGTTCGTCAATTGGGAAGCAATAGAAGAGAATCCCTTGACAAATTGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTGGGTCTTACCCAATTCTTGATTGTTTCAATCTTAGAAGGATCCACCATCACTCCTTCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTTAACATTTCCAATACCAATCTCAAATGCGCTTCATGCTCCTTCTTGCTCTTTGAGTATACCAATATATCATCAATAAATACGATCACAAAGAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGTAGGGGCATTCGTTAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTCGTTCGAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAATCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGGGGAAGAGGATAATTGTTCTTTATGGTTACCTTGTTTAGTTGTCTGTAGTCTATACACATTCGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATAAAGCCTTTGTTCAATAACACTTGAAGTTGTGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCCGGTTCGAGATCAATACAGAAGTCAATATCCCTATCCGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGAACTACTGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAATCATTTTCTTAGCACGAAGAAAGGAGACGATGCGGACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGGTCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGTATTACAATCCAAGATTGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATCACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTTACCAAACAAGACCTATATACCTTTTCAACTACCACATACTCACCCACCAGAGTAGAGACACAAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAACGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGTTCGTTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGGTTGCCCATCACCTCGGCCGTTCTGGTAACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAACATTTGGAGGTCTGTAACTCTGTTTTGGACAATATCACTTAATATGTCCAATCTCCCCACATCCATAGCACTCTCTGGGTTCATGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCGGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTTAGTAACTTCCCGAACCCTGTCCTCTAGTGTAAGTACCGTTAAACTCACCTCCCTTTCGAAACCTTTTTGATGTCGATGTCGTAGTGAAGTCATCTGGCTTTACTCCTTCCACTTCTATCACAAAGTCTACCACCTCTTGGAAGGATTTTGCCGTTGCCGCTATCTGTAAGGCCGAAATCCGCAATTCTGACCTTAACCCCTTCACAAACCGGCGAATTCGATCTTGGGGACTGAAACATAATTGGGTGGCATATCTGGATAGTGCGCGAAACCTAGCCTCGTAAGCATTTACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTTCGGGGGATATACTTCTCCATAAAAAAGCTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTCTGTTGGTTGACACTCAATATGTGACCGCCACCACATTTTGGCGTTCCCTTGAAACTGATAACTCACGAACTCAACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCATGTCAGTCAACCAGAAAATCGTAAGCATCCTCAGATTCCACACCCTTGAAGACTGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAAACGTGGAAACGTGCCTATTTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACCTCCGGAGCCTGAGGTGCTGGTGCAGAAAACACTGGGGGTGTCTGGCCCTGATCAGACAACCCACTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTTCACTTGTTCATTCACCCCATCCTCCCCCTCTCTTATCACTTCCTCAGTCGGTGGGGGAGTCACTGCCCTAGTATCAGATGGGCTAGGTGCTCGTCCTCTTCCTCTAGAGGACGCCCTCCCACGACCTCTACCACGGCCTCTTGCCGCTGCTCTTCCTCGAGCTACAGCCCCAGTGGCTGGCTCAGACGCACCTTGTCTCGCCGGTGCTGGTGTTGGCGTAGGCGTAGTCGTTGCTCTAGTTCTAAACATCTGCGAAAGAGAGTGAAGATGGTCAAATACCAATTCATATCGCCTAGATACCAATTGGACTCAAGTAGTAGCACGAAAGAAAGAACGAAAGAGTGAAATTTTCCTAAAGTCTTATAGCCTCTCAAGGAAAAGTAAAGGCGTCCCCCTACCGTTCCTTAAGACTCTACTAGACCTGTTCTTGTGTGATGAGACCAACGAACCTAATGCTCTGATACCAAGTTTGTCACGACCCAAATCCGGGCCGCGACTGGCACCCACACTTACCCTCCTATGTGAGCGAACCAACCAATCTAAACCTTAACATTTCAATGTAACATCAACAGAAAATAATGCGGAAGACTTAAACTCATTAATAAAAACCAATTCAATAACTATCAATATTCAACATCTATTATTTCCAAAACCTGGAAGTCATCATCACAAGAACATCTACTTTAAACTACTAATTCTAAGAGTTTCTAAAAGCTAAAAATACATAAGAAGCTAGTCCATGCCGGAGGTTCAAGGCATCAAGACATGAAGGAGAAGATCCAGTCCAAGCTAGACGCGTTAGCTCACCCTGAAGATCCGGTGTGACGAAGACTGGCTTGAGTTACTGTTGAGTCGAAGATGACGGCACGTTTGCTGCACTCCACAAATAACCAGAAGAAAACATAAAAGTAGGGGTCAGTACAAACCACGGGTACTGAGTAGATATCATCGGTCAACTCAAAATAGGGAACAGTATGTATTAAGCAATATCATAAAATCAACTAATATCCTTAACATGCAGCATTTATAGTTACCATAACCCTTGGTTACAACACCAAGCACATCAATGAGGACTCACACCTCCTCATCATACTCATTTGGGAATTTAGTTCATTAGATTGGATATATTATCATATTTCAAGATTCATTATCTTTATTCCCCTCGTGTCGGTACGTGACACTCCGCTCCTCAATATACTATCCTGGTACCGGAATGTGGCACCCGATCCATATTCTATCCTGGTGTCGGAACGTGACACTCCGATCCTCATATACTATCCTGGTACCAGAACGTGGCACCCGATCCATATATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTACCGGAACGTGGCACCCGATCCATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTACCGGAACGTGGCACCCGATCCCCTAATCTCACTACTTTCATTCATCAAGCCTTCTTTCATACCAAGGCATCATCATTATCAAAGTAGATTAGG</genome_strand>
        <mrna_strand>AGTATGTATTAAGCAATATCATAAAATTAACTAATATCCTTAGCATGCAGCATTTGCAATTACCATAACCCTTGGTTGCATCACCAAGCACATCAATGAGGACTCACACCTCCTCATCATACTTATTTGGGAATTTAGTTCATTGGATTGCATATATTAACATATTTCAAGATTCATCATATTTATTCCCCTCGTGTCCTTACGTGACACTCCACTCCTCAATATACTATCCTGGCACCGGAACGTGGCACCCGATCCATATTCTATCCTGGTGTCAGAACGTGACAC......................................................................................................................CCGATCCATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTACCGGAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCACCCGATCCATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTACCGGAACGTGGCACCCGATCCCCTAATCTCACCACTTTCGTTCATCAAGCCTTCTTTTATACCAAGGCATCATTATTAACAAAGTAGATTAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U315286" ref_strand="+" ref_description="SGN-U315286        Tomato 200607 #1 [5 ESTs aligned]">
      <seq>taatgaactaaattcccaaatgagtatgatgaggaggtgtgagtcctcattgatgtgcttggtgttgtaaccaagggttatggtaactataaatgctgcatgttaaggatattagttgattttatgatattgcttaatacatactgttccctattttgagttggccgatgatatctactcagtagccgtgttttgtactgacccctacttttatgtttttcttcttgttatttgtggagtgcagcaaacgtgccgtcatcttcgactcaacagtaactcaagccagtcttcgtcacaccggatcttcagggtgagctaacgcttctagcttggactggatcttctccttcatgtcttgatgccttgaacttccggcatggactagcttcttatgtaattttttagcttcttagaaactcttagaattagtagtttaaagtagatgttcttgtgatgatgacttccaggttttgggaataatagatgtttaataatagtagttattgattttattaatgagtttaagtcttccgcattactttctgttgctattacattgaaatgttaaggtttagattggttggttcgctcacataggagggtaagtgtgggtgccagtggcggcccggatttgggtcgtgacaaaacttggtatcagagcattaggttcgttggtctcatcacacaagaacaagtctagtagagtcttaaggaacggtagggggacgcttttacttttccttgagaggctataagactttaggaaaacttcactctttcattctttctttcgtgctactacttcgagtcaattggtatctaagcgatacgaattggtatctgaccatnctcactctcttgccagatgggtagaactagagcaacgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="59688" stop="114837"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59988" g_stop="60877" g_length="890"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="888" r_length="888" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-U315286" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>890</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U315286" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59988" e_stop="60877"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATGAACTAAATTCCCAAATGAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGTTGTAACCAAGGGTTATGGTAACTATAAATGCTGCATGTTAAGGATATTAGTTGATTTTATGATATTGCTTAATACATACTGTTCCCTATTTTGAGTTGACCGATGATATCTACTCAGTACCCGTGGTTTGTACTGACCCCTACTTTTATG-TTTTCTTCTGGTTATTTGTGGAGTGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCAAGCCAGTCTTCGTCACACCGGATCTTCAGGGTGAGCTAACGCGTCTAGCTTGGACTGGATCTTCTCCTTCATGTCTTGATGCCTTGAACCTCCGGCATGGACTAGCTTCTTATGT-A-TTTTTAGCTT-TTAGAAACTCTTAGAATTAGTAGTTTAAAGTAGATGTTCTTGTGATGATGACTTCCAGGTTTTGGAAATAATAGATGTTGAATATTGATAGTTATTGAATTGGTTTTTATTAATGAGTTTAAGTCTTCCGCATTATTTTCTGTTGATGTTACATTGAAATGTTAAGGTTTAGATTGGTTGGTTCGCTCACATAGGAGGGTAAGTGTGGGTGCCAGTCGCGGCCCGGATTTGGGTCGTGAC-AAACTTGGTATCAGAGCATTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGAGTCTTAAGGAACGGTAGGGGGACGCCTTTACTTTTCCTTGAGAGGCTATAAGACTTTAGGAAAATTTCACTCTTTCGTTCTTTCTTTCGTGCTACTACTT-GAGTCCAATTGGTATCTAGGCGATATGAATTGGTATTTGACCATCTTCACTCTCTTTCGCAGATGTTTAGAACTAGAGCAACGAC</genome_strand>
        <mrna_strand>TAATGAACTAAATTCCCAAATGAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGTTGTAACCAAGGGTTATGGTAACTATAAATGCTGCATGTTAAGGATATTAGTTGATTTTATGATATTGCTTAATACATACTGTTCCCTATTTTGAGTTGGCCGATGATATCTACTCAGTAGCCGTGTTTTGTACTGACCCCTACTTTTATGTTTTTCTTCTTGTTATTTGTGGAGTGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCAAGCCAGTCTTCGTCACACCGGATCTTCAGGGTGAGCTAACGCTTCTAGCTTGGACTGGATCTTCTCCTTCATGTCTTGATGCCTTGAACTTCCGGCATGGACTAGCTTCTTATGTAATTTTTTAGCTTCTTAGAAACTCTTAGAATTAGTAGTTTAAAGTAGATGTTCTTGTGATGATGACTTCCAGGTTTTGGGAATAATAGATGTTTAATA---ATAG-TAGT-TATT-GATTTTATTAATGAGTTTAAGTCTTCCGCATTACTTTCTGTTGCTATTACATTGAAATGTTAAGGTTTAGATTGGTTGGTTCGCTCACATAGGAGGGTAAGTGTGGGTGCCAGTGGCGGCCCGGATTTGGGTCGTGACAAAACTTGGTATCAGAGCATTAGGTTCGTTGGTCTCATCACACAAGAACAAGTCTAGTAGAGTCTTAAGGAACGGTAGGGGGACGCTTTTACTTTTCCTTGAGAGGCTATAAGACTTTAGGAAAACTTCACTCTTTCATTCTTTCTTTCGTGCTACTACTTCGAGT-CAATTGGTATCTAAGCGATACGAATTGGTATCTGACCATNCTCACTCTCTTGC-CAGATGGGTAGAACTAGAGCAACGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U335073" ref_strand="+" ref_description="SGN-U335073        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: beta-galactosidase(evalue: 3e-30, score=135)">
      <seq>ttaggttcgttggtctcatcacacaagaacaggtctagtagagtctttaggaacggtagggggacgcctttacttttctttgagaggctataagactttaggaaaatttcaccctttcattctttctttcgtgctactacttgagtccaattggtatctaggcgatacaaattggtatctgaccatcttcactctcttttgcagatggttagaactagagcaacgaccacgtcaacaccaacaccggccagacaagaaacaactgagccagccactggggctgtgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="60351" stop="61242"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60651" g_stop="60942" g_length="292"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="286" r_length="286" r_score="0.918"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-U335073" ref_strand="+">
        <total_alignment_score>0.918</total_alignment_score>
        <cumulative_length_of_scored_exons>292</cumulative_length_of_scored_exons>
        <coverage percentage="1.021" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U335073" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60651" e_stop="60942"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGAGTCTTAAGGAACGGTAGGGGGACGCCTTTACTTTTCCTTGAGAGGCTATAAGACTTTAGGAAAATTTCACTCTTTCGTTCTTTCTTTCGTGCTACTACTTGAGTCCAATTGGTATCTAGGCGATATGAATTGGTATTTGACCATCTTCACTCTCTTTCGCAGATGTTTAGAACTAGAGCAACGACTACGCCTACGCCAACACCAGCACCGGCGAGACAAGGTGCGTCTGAGCCAGCCACTGGGGCTGTAG</genome_strand>
        <mrna_strand>TTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGAGTCTTTAGGAACGGTAGGGGGACGCCTTTACTTTTCTTTGAGAGGCTATAAGACTTTAGGAAAATTTCACCCTTTCATTCTTTCTTTCGTGCTACTACTTGAGTCCAATTGGTATCTAGGCGATACAAATTGGTATCTGACCATCTTCACTCTCTTTTGCAGATGGTTAGAACTAGAGCAACG---A--CC-ACGTCAACACCAACACCGGCCAGACAAGAAACAACTGAGCCAGCCACTGGGGCTGTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U335932" ref_strand="+" ref_description="SGN-U335932        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|2190718|gb|AAB64397.1| beta-galactosidase [unidentified cloning vector](evalue: 3e-14, score=80.1)">
      <seq>cccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattataggcccagtagtcaaacgtggaaatgtacctatgtgcaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataaaccgctaagataagccagaacctgattgatcatctctggggtaggttggggtggcatttcctcattttgcacttgttcagtttccccatcctccccttctcttattacttcctcagtcggtggaggagtcaccgccctagtaccagatgggctcggttctcgttctcttcctctagatgacgtcctcccacgacctctaccacggccccttgccgctgttctcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="61681" stop="60649"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61381" g_stop="60949" g_length="433"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="433" r_length="433" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-U335932" ref_strand="+">
        <total_alignment_score>0.915</total_alignment_score>
        <cumulative_length_of_scored_exons>433</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335932" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61381" e_stop="60949"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCTTGAAGACTGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAAACGTGGAAACGTGCCTATTTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACCTCCGGAGCCTGAGGTGCTGGTGCAGAAAACACTGGGGGTGTCTGGCCCTGATCAGACAACCCACTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTTCACTTGTTCATTCACCCCATCCTCCCCCTCTCTTATCACTTCCTCAGTCGGTGGGGGAGTCACTGCCCTAGTATCAGATGGGCTAGGTGCTCGTCCTCTTCCTCTAGAGGACGCCCTCCCACGACCTCTACCACGGCCTCTTGCCGCTGCTCTTC</genome_strand>
        <mrna_strand>CCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAAACGTGGAAATGTACCTATGTGCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAAACCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGTTCAGTTTCCCCATCCTCCCCTTCTCTTATTACTTCCTCAGTCGGTGGAGGAGTCACCGCCCTAGTACCAGATGGGCTCGGTTCTCGTTCTCTTCCTCTAGATGACGTCCTCCCACGACCTCTACCACGGCCCCTTGCCGCTGTTCTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U335931" ref_strand="+" ref_description="SGN-U335931        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|47824972|gb|AAT38745.1| putative polyprotein, 3'-partial [Solanum demissum] (evalue: 1e-33, score=146)">
      <seq>acctagcccatctggtactaaggcggtgacacctccaccaactgaggaagtggtaagagagggtgaggatggggagaatgaacaagtgcagaatgaggaattgccaccccaacctacccaagagatgatcaatcaggttcttgcttaccttagcgggttatctgatcaaggccaagcacctccagtgttttctgcactagcacctcaggctccggaggtacaacatgcgcctactgtgactccccgcatcgatacctcattggaaataggaacgtttccccgtctgactacagggcctataatgacaaatgatcagcatgaactttttagtaagttcttgaaattgaaacctcaagtctacaagggtgttgaatctgaggatgcctacgattttctggttgactgtcatgagctactacacaagatgggtatagtagaacggtttggtgttgagtttgtgacttatcagtttcaagggaacgccaaaatgtggtggcggtcacatgttgagtgtcaaccaacagaggcaccacgtatgacttgggcatcattct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="60716" stop="61869"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61016" g_stop="61569" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="554" r_length="554" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-U335931" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U335931" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61016" e_stop="61569"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCTAGCCCATCTGATACTAGGGCAGTGACTCCCCCACCGACTGAGGAAGTGATAAGAGAGGGGGAGGATGGGGTGAATGAACAAGTGAAAAATGAGGAAATGCCACCCCAACCTACCCCAGAGATGATCAATCAGGTTCTGGCTTATCTTAGTGGGTTGTCTGATCAGGGCCAGACACCCCCAGTGTTTTCTGCACCAGCACCTCAGGCTCCGGAGGTACAACATGCGGCTACTATGGCTCCCCGCATGGATGTTCCATTGGAAATAGGCACGTTTCCACGTTTGACTACTGGGCCTATAATGACAAATGATCAGCATGAACTTTTCAGTAAGTTCTTGAAATTGAAACCTCCAGTCTTCAAGGGTGTGGAATCTGAGGATGCTTACGATTTTCTGGTTGACTGACATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTCGTGAGTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATATTGAGTGTCAACCAACAGAGGCACCACCTATGACTTGGGCCTCATTCT</genome_strand>
        <mrna_strand>ACCTAGCCCATCTGGTACTAAGGCGGTGACACCTCCACCAACTGAGGAAGTGGTAAGAGAGGGTGAGGATGGGGAGAATGAACAAGTGCAGAATGAGGAATTGCCACCCCAACCTACCCAAGAGATGATCAATCAGGTTCTTGCTTACCTTAGCGGGTTATCTGATCAAGGCCAAGCACCTCCAGTGTTTTCTGCACTAGCACCTCAGGCTCCGGAGGTACAACATGCGCCTACTGTGACTCCCCGCATCGATACCTCATTGGAAATAGGAACGTTTCCCCGTCTGACTACAGGGCCTATAATGACAAATGATCAGCATGAACTTTTTAGTAAGTTCTTGAAATTGAAACCTCAAGTCTACAAGGGTGTTGAATCTGAGGATGCCTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACGTATGACTTGGGCATCATTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U317064" ref_strand="+" ref_description="SGN-U317064        Tomato 200607 #1 [6 ESTs aligned] genbank/nr: gi|47824972|gb|AAT38745.1| putative polyprotein, 3'-partial [Solanum demissum] (evalue: 5e-64, score=248)">
      <seq>acgaataggcatatcaagaaattcacaatgtaaatttagaccattagcaaatgaggaagatacataagaaaacgtggatccaggatcaaacaatacggaagccatgcaatcacaaactagaagattacctgtgatgacagcatcagatgcctccgcttcagaccgcccagggaaagcgtaacaatgggccctatcgtttgtctgcccattgcccctaccatgttgtgatgtagtggccccagtttgcccattacctctgccgttttggtgaccaccattacctcgaccaccacgtcctccagaataacggcctctaccatgaccacctctacctctagctattgggggtctataacttggtccgggacaatttatcctaatatgtccaatctccccacatccataacattctctggagtcactcataggccccttggagaagtgttgaccggtctgaggtggacccccaactacagtctgtagtgaagactgaatgggtcgagctgagtaacctccggaaccttgtcctctagagtaagaacccttaaactcacctccctttcgaaacctctttgatgtcgatgtcgtggtgaagtcgtctggcttcactccttccacttctatcacaaagtctaccacttcttggaaggattttgccgttgccgctacctgtaaggacgaaatccgcaattctgacctcaaccccttcacaaaccggcgaatccgctcttgaggactgaaacagagttgagtggcatatctggatagtgcacgaaacttagcctcataagcattaactgacaccctaccttgctctaggctcaagaactcatcccttttcttatccctcaaagtccgggggatatacttctccataaacaaactatagaatgaggcccaagtcataggtgatgcctctattggttgacactcgatatgtgaccgccaccacatttgggcgttcccttgaaactgataagtcacaaactccacaccaaaccgttctactatacccatcttgtgtagtagctcgtgacagtcaaccagaaaatcataagcatcctccgattcagcacccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattatagggacagtagtcaaacgtggaaatgtgcctatgtccaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataacccgctaagataagccagaacctgattgatcatctctggggtaggttggggtggcatttcctcattttgcacttgttcagtttccccatccctccctttctctattacttcctcagtcagtggaagagtcactgccctagtatcagatgggct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="62756" stop="60720"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62456" g_stop="61020" g_length="1437"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1437" r_length="1437" r_score="0.918"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-U317064" ref_strand="+">
        <total_alignment_score>0.918</total_alignment_score>
        <cumulative_length_of_scored_exons>1437</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U317064" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62456" e_stop="61020"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAACGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGTTCGTTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGGTTGCCCATCACCTCGGCCGTTCTGGTAACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAACATTTGGAGGTCTGTAACTCTGTTTTGGACAATATCACTTAATATGTCCAATCTCCCCACATCCATAGCACTCTCTGGGTTCATGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCGGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTTAGTAACTTCCCGAACCCTGTCCTCTAGTGTAAGTACCGTTAAACTCACCTCCCTTTCGAAACCTTTTTGATGTCGATGTCGTAGTGAAGTCATCTGGCTTTACTCCTTCCACTTCTATCACAAAGTCTACCACCTCTTGGAAGGATTTTGCCGTTGCCGCTATCTGTAAGGCCGAAATCCGCAATTCTGACCTTAACCCCTTCACAAACCGGCGAATTCGATCTTGGGGACTGAAACATAATTGGGTGGCATATCTGGATAGTGCGCGAAACCTAGCCTCGTAAGCATTTACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTTCGGGGGATATACTTCTCCATAAAAAAGCTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTCTGTTGGTTGACACTCAATATGTGACCGCCACCACATTTTGGCGTTCCCTTGAAACTGATAACTCACGAACTCAACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCATGTCAGTCAACCAGAAAATCGTAAGCATCCTCAGATTCCACACCCTTGAAGACTGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAAACGTGGAAACGTGCCTATTTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACCTCCGGAGCCTGAGGTGCTGGTGCAGAAAACACTGGGGGTGTCTGGCCCTGATCAGACAACCCACTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTTCACTTGTTCATTCACCCCAT-CCTCCCCCTCTCTTATCACTTCCTCAGTCGGTGGGGGAGTCACTGCCCTAGTATCAGATGGGCT</genome_strand>
        <mrna_strand>ACGAATAGGCATATCAAGAAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAACGTGGATCCAGGATCAAACAATACGGAAGCCATGCAATCACAAACTAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGCCCATTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCGTTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGGGTCTATAACTTGGTCCGGGACAATTTATCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTGGAGTCACTCATAGGCCCCTTGGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATGGGTCGAGCTGAGTAACCTCCGGAACCTTGTCCTCTAGAGTAAGAACCCTTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTCGATGTCGTGGTGAAGTCGTCTGGCTTCACTCCTTCCACTTCTATCACAAAGTCTACCACTTCTTGGAAGGATTTTGCCGTTGCCGCTACCTGTAAGGACGAAATCCGCAATTCTGACCTCAACCCCTTCACAAACCGGCGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACTGACACCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCTTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAACTATAGAATGAGGCCCAAGTCATAGGTGATGCCTCTATTGGTTGACACTCGATATGTGACCGCCACCACATTTGGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAGAAAATCATAAGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGGACAGTAGTCAAACGTGGAAATGTGCCTATGTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGTTCAGTTTCCCCATCCCTCCCTTTCTC-TATTACTTCCTCAGTCAGTGGAAGAGTCACTGCCCTAGTATCAGATGGGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U335938" ref_strand="-" ref_description="SGN-U335938        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|49533772|gb|AAT66771.1| putative polyprotein [Solanum demissum] (evalue: 4e-59, score=231)">
      <seq>gcaaggtaggatgtaggtcaatgcatatgaggctaagtttcgtgcactatccagatatgccactcaactttgtttcagtccacaagagaggattcgtcgttttgtgaaagggttgaggtcagagttgcggatttcagcgttacaggtagcggctacggcaaaatccttgcaagaaatggttgacttcgatgtaattctgggtatgacttggctttctccaaattttgcaatcttggattgtaatgctaaaaccgtgacgttagccaagcctgggacagatctgttagtgtaggagggtgactacacttccaatccggtgcgtatcatctcctttcttcgtgctaagaaaatggttagtaaagggtgtttagctttcttggcacatctcaaggataacactacccaagtaccttcgattgactcagtttcagtagttcgtgagtttatggatgtgttccctgcagatcatcctggtatgccaccggatagggatattgacttctgtattgatctcgaaccgggcacacgccccatttttatacccccttatagaatggctcccgcagagttaagagagttaaaggcacaacttcaagagttattgaacaaaggcttcattagaccaagtgcatctccttggggtgctccggttttgttgtaaagatcggcagtttttgaatgtgcatagactaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="61343" stop="63351"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61643" g_stop="61815" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="0.867"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61816" i_stop="62559" i_length="744">
            <donor d_prob="0.000" d_score="0.88"/>
            <acceptor a_prob="0.000" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62560" g_stop="63087" g_length="528"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="694" r_length="521" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-U335938" ref_strand="-">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>701</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U335938" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="61643" e_stop="61815"/>
          <exon e_start="62560" e_stop="63087"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAGGTAGGATGTCGGTAAATGCTTACGAGGCTAGGTTTCGCGCACTATCCAGATATGCCACCCAATTATGTTTCAGTCCCCAAGATCGAATTCGCCGGTTTGTGAAGGGGTTAAGGTCAGAATTGCGGATTTCGGCCTTACAGATAGCGGCAACGGCAAAATCCTTCCAAGAGGTGGTAGACTTTGTGATAGAAGTGGAAGGAGTAAAGCCAGATGACTTCACTACGACATCGACATCAAAAAGGTTTCGAAAGGGAGGTGAGTTTAACGGTACTTACACTAGAGGACAGGGTTCGGGAAGTTACTAAGTCCGACCAATTCAGTCTTCACTACAGACTGTAGTTGGGGGTCCACCTCCGACCGGTCAACACTTCTCTGAGAGACCTATGCATGAACCCAGAGAGTGCTATGGATGTGGGGAGATTGGACATATTAAGTGATATTGTCCAAAACAGAGTTACAGACCTCCAAATGTTAGAGGTAGAGGTGGTCATGGTAGAGGCCGTTATTCTGGAGGACGTGGTGGTCGAGGTAATGGTGGTTACCAGAACGGCCGAGGTGATGGGCAACCTGGAGCCACTACATCACAACATGGTAGGGGCAACGAACAGACAAACGATAGGGCCCATTGTTACGCTTTCCCTGGGCGGTCTGAAGCGGAGGCATCTGATGCTGTCATCACAGGTAATCTTCTGGTTTGTGATTGCATGGCTTCTGTATTGTTTGATCCTGGATCCACGTTTTCTTATGTATCTTCCTCATTTGCTAATGGTCTAAATTTACATTGTGAATTACTTGATATGCCTATTTGTGTCTCTACTCTGGTGGGTGAGTATGTGGTAGTTGAAAAGGTATATAGGTCTTGTTTGGTAAACTTTGTGGGGAGCAACACTTATGTAGATTTGGTTATCTTAGAAATGGATGATTTTGATGTGATTCTGGGTATGACTTGGCTTTCTCCGCAATTTGCAATCTTGGATTGTAATACTAAAACGGTGACGTTAGCCAAGCCTGGGACAGACCCGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTCCGCATCGTCTCCTTTCTTCGTGCTAAGAAAATGATTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTGAGTCGGTTTCAGTAGTTCGTGAGTTTCTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCGGATAGGGATATTGACTTCTGTATTGATCTCGAACCGGGCACACGCCCCATTTCTATACCCCCTTATAGAATGGCTCCCGCGGAGTTAAGAGAGTTAAAAGCACAACTTCAAGTGTTATTGAACAAAGGCTTTATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGGTTTTGTTTGTAAAGAAGAAGGATGGGAGTTTTCGAATGTGTATAGACTACA</genome_strand>
        <mrna_strand>GCAAGGTAGGATGTAGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCCAGATATGCCACTCAACTTTGTTTCAGTCCACAAGAGAGGATTCGTCGTTTTGTGAAAGGGTTGAGGTCAGAGTTGCGGATTTCAGCGTTACAGGTAGCGGCTACGGCAAAATCCTTGCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGTTGACTTCGATGTAATTCTGGGTATGACTTGGCTTTCTCCAAATTTTGCAATCTTGGATTGTAATGCTAAAACCGTGACGTTAGCCAAGCCTGGGACAGATCTGTTAGTGTAGGAGGGTGACTACACTTCCAATCCGGTGCGTATCATCTCCTTTCTTCGTGCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATAACACTACCCAAGTACCTTCGATTGACTCAGTTTCAGTAGTTCGTGAGTTTATGGATGTGTTCCCTGCAGATCATCCTGGTATGCCACCGGATAGGGATATTGACTTCTGTATTGATCTCGAACCGGGCACACGCCCCATTTTTATACCCCCTTATAGAATGGCTCCCGCAGAGTTAAGAGAGTTAAAGGCACAACTTCAAGAGTTATTGAACAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGGTTTTG-TTGT--A-AAG-A--TCGGCAGTTTTTGAATGTGCATAGACTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U335930" ref_strand="+" ref_description="SGN-U335930        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: hypothetical(evalue: 7e-35, score=150)">
      <seq>aaacacgaataggcatatcaagtaattcacaatgtaaagttagaccattagcaaatgaggaagatacataagaaaatgtggatccaggatcaaacaatacagaagccatgcaatcacaaaccaaaagattacctgtgatgacaacatcagattcctccgcttcagaccgcccagggaaagcgtaacaatgggccctatcattcttatgtctgttgcccctaccatgttgtgatgtagtggctccagtttgcccatcacctcggccgttttggtgaccaccatttcctcgaccgccacgtcctccagaataacggactctgccatgaccacctctacctctaacctttggaggtctgtaactctgttttggacaatatctcttaatatgtccaatctccccacacccatagcactctctgggttcatgcataagtctctcagagaagtgttgaccggtcgaaggtggacccccaactacagtctgtagtgaagactgaattggtcggactgagtaacttcccgaaccctgtcctctagtgtaagcaccattaaactcacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="62760" stop="61602"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62460" g_stop="61902" g_length="559"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="559" r_length="559" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-U335930" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>559</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335930" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62460" e_stop="61902"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACACAAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAACGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGTTCGTTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGGTTGCCCATCACCTCGGCCGTTCTGGTAACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAACATTTGGAGGTCTGTAACTCTGTTTTGGACAATATCACTTAATATGTCCAATCTCCCCACATCCATAGCACTCTCTGGGTTCATGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCGGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTTAGTAACTTCCCGAACCCTGTCCTCTAGTGTAAGTACCGTTAAACTCACC</genome_strand>
        <mrna_strand>AAACACGAATAGGCATATCAAGTAATTCACAATGTAAAGTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAAAAGATTACCTGTGATGACAACATCAGATTCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCATTCTTATGTCTGTTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGTTTGCCCATCACCTCGGCCGTTTTGGTGACCACCATTTCCTCGACCGCCACGTCCTCCAGAATAACGGACTCTGCCATGACCACCTCTACCTCTAACCTTTGGAGGTCTGTAACTCTGTTTTGGACAATATCTCTTAATATGTCCAATCTCCCCACACCCATAGCACTCTCTGGGTTCATGCATAAGTCTCTCAGAGAAGTGTTGACCGGTCGAAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTGAGTAACTTCCCGAACCCTGTCCTCTAGTGTAAGCACCATTAAACTCACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U346023" ref_strand="+" ref_description="SGN-U346023        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>aaaacacttagaaaatctgaaattgggtactgaaaatcgactctctgaacttcgtgacggaatgacaggacggaccatcacaggcgtgacggaccgtcatagattgttcagtggaaattgactctctgacccttgcgacgacctgcaggacggaccgtcacagtcacgacggcccgtcacaggttgcgcaaatcccaggcagaatcggatttccttacacgttttaagggacgtttttggactattctttccttaattatagatttcgtgggtttatattaataactcaaattcttggggttaaaagaggtaaccctaagttaattagtggggtattattgccatcttttattcttaattatatgttaatttggggtaaaagaaagagggttttgaaacgagaccctgcgatggtccgtcgtgcccatgacggtccgtcgtggggtccgtcgcttctgccagtttttccagaaataaagtctgctgctcaaaacgactaaacgggtcgttacattatttgactctatcactttaattttctagttaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="65618" stop="81246"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65918" g_stop="66305" g_length="388"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="389" r_length="389" r_score="0.928"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66306" i_stop="80810" i_length="14505">
            <donor d_prob="0.000" d_score="0.81"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80811" g_stop="80934" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="390" r_stop="513" r_length="124" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-U346023" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>512</cumulative_length_of_scored_exons>
        <coverage percentage="0.934" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U346023" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65918" e_stop="66305"/>
          <exon e_start="80811" e_stop="80934"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACACTTAGAAAATCTAAAATTGGGTACTGAAAATCGACTCTCTGAACTTCGTGACGGAATGGCAGGACGGACCGTCACGGGCGTGACGGACCGTCATGGAGACTTCAGTGAGAATCCACTCTCTGAACTTTGCGACGACCTGCAGGACGGACCGTCGCAGGCACGATGGCCCGTCACAGGTTGCGCAAATCCCAAGCAGAATCGGATTTCCTTACACGTTTTAAGGGACGTTTTTGGACTATTCTTTCCTTAATTATAGATTTCGTGGGTTTATATTAATAACTCAAATTCTTGGGGGTTAAAAGAGGTAACCCTAAGTTAATTAGTGGGGTATTATCGCCATCTTTTATTCTTAATAATA-ACTAA-TTAGGGTAAAAGAAAGAGGGTTTGAATAAGAAAAATAAGAAAGAACAAAAAGAGACAGAAAAAGAAAGAGAACGAGTAGAAAGAGAGAGAAACGAAGAGGATAGCAAGGATTCTGAGAAGATAGCTTGTTGATTTCAATTCTTTGGTGGAGGTAGGTTATGGTTATTTCATGCTATTCGTAGTAAACTCTTAATAGTGAATGATATGTGTTAGTAGTATTGTAAACCCTTCTATATGCTTAATTGTATGCTTGCATGAATGATGTGATTATGTAATTATGAATAAACAAGCATGATGAAGCTATTGAATCCCAAATCTTGAAAAGAAACCCTAATCTACTTTGATAATGATGATGCCTTGGTATGAAAGAAGGCTTGATGAATGAAAGTAGTGAGATTAGGGGATCGGGTGTCACGTTCCGGTACCAGGATAGAATATGGATCGGGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATATGGATCGGGTGTCACGTTCCGACACCAGGATAGAATATATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGTATATGAGGATTGGAGTGTCACGTTCCGACACCAGGATAAAATATGGATCGGGTGCCACGTTCTGGTACCAGGATAGTATATTGAGGAGCGGAGTGTCACGTACCGACACGAGGGGAATAAAGATAATGAATCTTGAAATATGATAATATATCCAATCTAATGAACTAAATTCCCAAATGAGTATGATGAGGTGGTGTGAGTCCTCATTGATGTGCTTGGTGTTGTAACCAAGGGTTATGGTAACTATAAATGCTGCATGTTAAGGATATTAGTTGATTTTATGATATTGCTTAATACATACTGTTCCCTATTTTGAGTTGACCGATGATATCTACTCAGTACCCGTGGTTTGTACTGACCCCTACTTTTATGTTTTCTTCTGGTTATTTGTGGAGTGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCAAGCCAGTCTTCGTCACACCGAATCTTCAGGGTGAGCTAACGTGTCTAGCTTGGACTGGATCTTCTCCTTCATGTCTTGATGCCTTGAACCTCCGGCATGGACTAGCTTCTTATGTATTTTTAGCTTTTAGAAACTCTTAGAATTAGTAGTTTAAAGTAGATGTTCTTGTGATGATGACTTCCAGGTTTTGGGAATAATAGATGTTGAATATTGATAGTTATTGAATTGGTTTTTATTAATGAGTTTAAGTCTTCCGCATTATTTTCTGTTGATGTTACATTGAAATGTTAAGGTTTAGATTGGTTGGTTCGCTCACATAGGAGGGTAAGTGTGGGTGCCAGTCGCGGCCTGGATTTGGGTCGTGACAAGCTCTTTCGTTTCTTGAAATGCATGGGGCCTAATCGATTAAAACAAAATTGATTTGGGGAGAGATTATAGGAGAAGTTGAAAGAAAATGGAAGAGAAAAATAGTTGAATCATAGCATCAGTGAGAATTTTGGCGATAAAATGATTCGCACCAAATTTGTGTGTCTTGTACGTTGTAGTTTGTGCGGAGATGTTGTGACATGAATGGAGACATGTACTCTGGATTTTCATCGGAAAAGATGCGATAGTTTGATGTAGAGATCGGAGCAGATGAAATGGAGCACTTCCATTTTTGTTCTGCTTTATTTTGTTTTTGCTCGTTCAATGCATACCACTTTTGGGTATGTTATGTATCCTTTTGTTTTATTAAATAAATGACCCTTTATTGGGTTGCTTTAAAAAAAAATCTTTTGTTTTGTGAAAAAAATTACGGGTCCTAAATAGCAAAAATAGTATAACATTAGCTGCGTATACAAATATATGAAATAGTAGCTATAAAATTTATTTTAATTTAAATTTTTGCTATTATGTACGATAGCAATAATTCATACAAGACAAATTCATATGATGAGATACGTGATTGATCGACTTTTGATGAAAGAAATTTATTTCTTCTACAAAAGGGATGTGTTATAATGGAAATTTTGATAAATCATCCTTGGTGACACAACAATAATATGGATAAAATATTGGTATGAAGAAAATAATGAAATGTACTATGTTTATATCACACGTGTCAGCAATATGTTATGACAATCGAACAAGTTTAAATTGTTGGGGGTCCTCAAATATAATGTTTACTAGGAGTTTGTTACTAGAAACCCTCTTTATGCTAATTAGCATTGTAGTTTCCACGTCATGGGAACATCGAATAAACCTATCTTCCTTTGTGAAGGAACACCTCTCATTGTCAAGTTCACTCGGTGCTAATCTAAATTTCCTTTTTGAAGTATCTTTAAGTCTTTCTTAACATTAATTTATAACATAGGTCTTAGGAGTTTAACCCCTCATATAACATGTTCATAGCTCATAGTTTTTGGGATGACAAAACCCTTTGATCACAAACCCAACATCATGTGAAAACATTACTTCATGACATAGTCATAAGATGTACATGAGAATTACCTTCAATCCCTCATATTAGCATACCTATCATAATATTGCCACCATCATATTCATAGCATGATCATACATTCATAATTTCATCATTCATACTTCAATTAATCAACATTACCAAGGATAAACCACTAATACTACTATAGAATGTTCATGACCTTGAAGATCTTACCAATGGTCTTCAAGAAACCCTTTCAAGACTTTATCCCAAATCCATGATATTTATCCATAAAATCAATTATCATCATTGTACAATAGTTAATTATAAAAGAACATACTCAATTACATTACCTTTAAACATTAATCAACATAATTCAAGAGTTAGGGTTAAGAAAAGAGGGACATTCATGGGTCTTCAAGAATTGGGTCAAAAACCTAAGGTAATCCTTCAAATCAATCATAAAAATTCTTAATCCATCATTATTAATCAAATATATACCAAATGAGTCAAGTTTAAAGGGGACCAACGAATTTGAGCGATTTCTAGGAAATGGGAAGAACATTGAGAAATCAATATAAAGGAACCTTTTGTGGAAAGAAGTCCCAAGAGTGGAGAGTTCTCATACATTATCAATCCTTAAGGATTAATGAATAAAATCCTTGTTCTTGAGCCCTAATTGAAGCTTTGACCTTCTTCTTCGATGGAGTCTTTGTGTAGTGAAAGAGAATTTAGAGAGAAGCTAGAGCAATTGGGTTTTCAATTTGGAGATTTGTTTTGGTATGGGAATGGGTGTAAAATGAATTAAGTTCAATATATACTAAGCCCCTAAATACCAAAAACACCCCTCACTTGGTTGGACCTTTTAATTAGGTCTAACTTGACTTTTATTTTTGGTGTTTTCATCGCGGAACAAGTTCGTGCGGAAGAGGTGTTACCTGGAGTTTCTGGAAATTAATTTTTGGATAGAGAGGTGCGTGAAAACGTCCACGACACGCACCAACATTTTGGATTTTGATGGAGCTAGTCCGTGATGCGGACACACTCCTTCACTCACTGGACAAGCTGTCCTGTCCAAATGTTTGGGTCCTTCTCAAGGATCCCTAGGGTGGTCCTTGGGGGGTTGCACCCAAACATTTTGATCCTAAAAATATTTTTTACCTATTTAAAGCATTTTTAAAAGTTGTACCCTTCATACGACACTCCCAAACCTTCACAAGACCTAAGAACACCTATTGGTTCAATTTCACTAGTTTCTAGACGTCATGGTCGTTTCTCATGTTTAGGCTCTAATACTTCAAAACAAGTTAATTATGTTAGTATAGGTCCTATAACATCATTTTTACCATTTTTAAGTTATTAAACTTCATTCAAATATCTAGCTTAAATAATTAGAATTTCTGAGGTGTAACAGACCTGCATCATGAAAACAGATGCAAAGTTTAATATGAGTATCAAAACAACAAGTACCTAGTAGGCATCATAAGCGACTGAGCAAGGTAAAAATAGACGGAAAAGTAGAATCAAACACAAATAGAGGTTACCATAAATAAGAGCAGAACAATCAGAGAGATAGTTTAAGGATATTTAACATAAACTCAGCTACACCCCCCTTAAGACCCTCTAGGTACACTCACGCACAAACAAGCAAGAATTCAAAAAGACTCGCATAAGCTCGACAGGTACACGGAGAAGCCAAAACTACGAAATGCAACTCCAAACCAACACAACTAACAACTTCAACCTAGTTAACAAGTCTCACTTCAACATCAGGCCACCTAGACCTCAACAACTCCGAGGCATTACCTAGTCAGGCGAGTGTCACATGGGAATATATCAATCCCCTTCAAAAGCCATAATCCAACTAATAAATAGGCAAACACTTCGAGGGGATGCCTAAACCATCAAAGTTTGCCATTTAACACTCTTGGGGGACTTGCCCTGGCCATACAAAGTGTGTGGGGCTGTCAACTTCGAAGAAGAGCTCAAGTAACTTATATCCAACTACCCAACCAGCTAATCACTTCAAGGGCCTTGTCCAGTGCCAGTCAGGTGAGTCAGTTATCACTTCCGGGGCCTTGACCAATCCTTGACAGAGAGTGCGAGTAAAAACAACTTCTTAGAGGATTTAAAATTCCAAACTATGGTGGATCGACGTTCACTACCCACTACCTTACACCAGAACCGACCATAACTCACCCAAACCAAGAAAAAACAATGCCTCTGATAACTCATAGGCAGCACAAAAATGAGAGACAAGCCAGAAGGATCACAATCACTAAAAATACCAAATCTAGGGTCAACTATCATACAAGAATCTGCTATGCCGGTCTACAAGGACCTTGCCCATCAGAATCAACATCGAAGATATACAAAAGTCAACCAGGTGCATGGTTCTACGACACTAGTTTATTCTAGACTAAGGCCAAAGATAAATTCCAATATAAATAAATAGCCAATTAGATATTATGCATGTAACGACAAATAAACAACCCAACAGGTAATTCACGAATACCCAAAACTGAACAACCCCTCCAACAGCATAGTATTAACCCAAAACAACATGAAACCAAACCTACAACATAGTTTCTGAGAAGAAGATAAGAAATACTAGCAGCCCACTCCAGATTCACACAATTCAACATGCATTTACACAATCATGCTCAATCTAAATGAGAGGAAGTCGTAGCCTTACTTGAAGGTCGACCGCGTGCCTTCAAATCACTATACACGAGTTTTCCCCTTCTAGACGACCTCATATTGCTGCCACAATATCAAAAATAGATTCACAACATCAACACGATCATTTAGAAAATAGAATCATCGAAATTGGATATAAACCAATTTAAGAGTCAAAATCGGGAAATATGGGACCCGCTCTCGAATTTCAGAAATTGACTTCGTGAAGAGGTCCTAAACTCTCCCCTTAGCTTGTCTTCCAAAATGAACTAGATATGTTTACCTCCCTTAAATTTGACATTTCGGACTCAATGGTGCATCATAATTTCCATATGAGGTCATTTCGATAAAAAAGTGTACCCCACACCCAAATGCCATTTTTAGCCAATTTTCACCACGGGCCTCAAAATAAGATCGAAATCCCCAAAAGCACACGAAGGGTCATTCTAGATCAAACTAGACATTTCAAAACTAACCGCGCTGACAGAATTTTCATCCGAGCGCATTTACCAAGAATGTTGACCAAAGTAAAATTTAAGCCAAAATTCATAGACTAAAGCCCCAATGGCCCCAAGTCACAACGAAAGCCTCGAAACTCATACAAACCATGCTACTAGCCTAATTTAGCCGCTCTAGAGCTGATGCGATTGTCAGAATTCTCATCTGAGGTCGTTTACCTAAGTTTATGATTGAAATTAATTCTTCAAGTTTCAAAATCTCCAAAATAGGAAAATGAGCATAAAACCCAAACAAACGACCAGTCGACGGAAGACTTAGTGCCACCAATTCATAAATGACTTTGGGTCGCCACAAGAATGCTCTGAATGACGAGAAAATGGTATTAAGGCAAAAATGACCTGAATGAATATTACAACCTCTTAGGGTCATATACGTCATGTCACGTCTAGGGTATAATTTGGGTCATGACACATGTGTACCATAGTTAGTCAGCATAAGAATTTGCTTGGAACCATTAATGATTTTAAATATTGGTCACATCTAAGGTGTAGACTCATGCCGTGACATATTTTTTTTGTGAATCATCATAACTACATAAATCTTAACAAATAGGTGAAAAAGGTGATGATAAAGTTTAGGGAGATCATAAAGGTAGAATTAGAGGATAGGGGTAGAAGATGGTTGGGGGAACCCCCAATGTATCTGTCAATGTTTTCCATAAATCAAGCTTTCACAAAAAAAATTAGGGTTGAAAACATGATTGAAGACAAAAGGAAGAAAAGAAAGGAGGAAAAAAATTCAAAAAATAATAATTTACTAGTGAAATACACGTGCACATATCTGGTTATGACGTTTTAAGGGGTTATATATTTCAATTTTAACAAGTTTGGGGGGGGGGTAATATGTTAGGTGGATTTGATTATTTAAAGGTAAGTATTTGTAAATATGAATATAGGTGTGCGGGGGGGGGGGGGGGGGTTGACTATTTTCTCTATTAATAGTATAGAAATTAGTTACCAAAAAAATCTATGTATTAGTTATATAAGTACTAGTTATTTCACATTTTATGCTGCATAAAATAAAAATAGATTGCCTCATAACTTATACACTTACTATTTATGCGGGTTTCTAAATTTTCAATCGAATATTTATTTATATCACAATAAATAACTTACTTTCTATTTATCTAGGGAAAAGGGACAGATATATCCCCGAACTATTGTAAGTGGGTATAAAAATACCCTTCGTCATACTTTTGGACATTGGAGCCCGTGTCGTCATACTTTTTAGACATTGGTGCCCTTGTCGTCATACTTTTGGGACATCGGTGCCCCTGCCGTCATACTTTGAGGACATTAGTGCCCCAATCCCTTCGCTGGAGTGAAGAGCATATATGCTCTAATTTATGGACGACAAGGACACCAATGTCCCAAAAGAATGATGGAGGGTATTTGCATGCCATTTACGGTAGTTCGAGGGTATATTTGTCCTTTTTTCTCATTTATCTATCAAACGTAGTATAAGTTATATGGATATTAATACATGAGTAACTTCGTTTTTTATCCTATTAGACGACCTCAAATTTAATGCTCACATAACTAATAAGTGCATAAAATAATGATTTTCTCATAATTAATCCCTACATTCTTTTAGAAAGAAAAAAAAGTATGTGCCGTTTGTATAGATCGAGAGTTGTAGCTTGATTCGTTACTCATTCCATATCGGGAAGAATTGCAGGAACGATATATAAGAGGGAGTTAGAGCACATAACAAGTAACATGTGTGCTATACTTGGAATTGTAATTGAGCTTGAGGGCATCGATGTCATTTCAAGCTTCCACTTTATGGCTTGATGCTTTGGGGATGTTGCACTAATTAGTATATTGTTTGTATCTTCTCCCTTATGGGGAAAAATGTGCTATATTGTGGTTTATTTTTGCTCTTATCTGGGCCCCACCTACGTTCGTGTTCAACTCTTTATTTGACTATTATTTAATTACTTCAATTCCAATTAAATCAAATTGTCTTATGCTTTCTAGTATTTACTCCGTCCACTTCATTTTAATTATTTTAAATTTTTAAAAATGTATTTCATGTTTAATTTAGTTTTATTAGCATATAATTTATCCAAGATTATATAACCCATTTTAGTTATGTCATTTCATTTTAAATTCATATCTTTTCATTATAGATTTATTATTTTGAATGTCTTAATATGTGTGAAAATTTATAACTATTTGAGTAAAAATTATCGATTGATGGAGGAAAAAACAGCAATTATAGACATCTAAATGAGAATCCTCACATTAAATTTCTGAGGAAAAAGAATGAGGTGATTTTAAGAACAAAAATTCAAAATCATTTAACTAGTGAAAGTTAAAATTTATTAATATTGCTAATATTTATTTAACACTTAATAAAAAATTTAAAATTATTTAATTAATACTACTTGAAAATATAATTTATCAATAACTTAGTGTTCTTCATAACTAGTTGCTAATATATGCATAACTCTAACCAACTACCAAATGACCCCTTACTTAATATGAACGATATTTTAGAAAACTTAACATTCATTTTTATGAGACTTAGGCCTCAATTGTTTGCACTTGATGAAAATCTGAATTTCAATGCTTCAAATATTAATTAAGTGTTTTTATTTTTTTCTATTTTAAAATTTATTAATGGATCTGAATGAATCAGATATGTGATAGGATCTTAATCTTATTTAGACTTTAAAGACACTTTTATTTTTTAAATAAATTGTGCTCTATACTATTTTTTTCAAAAAAAAAAAAAAGTTCAAAGTCTCTCTACTTCTCCAACTTTATCAATTATCCAAATTCTTTTCAACCTTTTAATTTTTGTTCTTGCTTCTTGTTTATCAAGAATTGATGAAATTTATTTCATTGGATTAGAGTGCAAAACCACTTCATAAAAGCATGTGTTGTTGAGATTTTATAAATTTGTTTTAAGCCATTTGAATGTATCATGCTAATTATTTATTTTAGAGAAGAGTACATGGGCAAATACATTATAGAACATACATGTTTCACTTATTTATTCAAGATTAATTTATGTTGATTTTTTTAATAAAAAAGATGGCTAATATCTTTTTTAACAATTATAGTTAATGTAATACTTAATTACTATTTTATTTGAATTAAAATACTTATTGTGTTAATGTAATACTTATAGAGAGGGGGGAGGGGGGGGATTTTAATTATTTAAATGAACATTTAGATTAAAATATTTTAATCTTAATAAAAACAAATGAGGCATTACTTATATTTTAAAATAATATTTTATGTAATTTGTTTACTCTTTATATTTATATTTATACTAGTTAACATATTCGCGCTTCGCGCGGACATTAATAGATTTATGAATAATTTTTTTTGATTAAATATATCGAGTCAAATATTATTATCATTAAACCCAATAATTTATATTTTTCAACTTGTTGTTCACTATCTATATTTTTAGTATTTTAAATATAGTTGATTTCGTATAATCTATTTTGTATGTTATCTTTAAAAACATGTAAAGAAAGAAGAATAATTTCATGAAAATTTTCTTTTTGTTTATGCGGCTGTAGTAAATTCTAATTATATTTTAGGAGGGAGTTAAATTATACAGTGTTCATAAAAATATATTAATAAAAAAAGTTACTCTAAATAAATTGATAACCGACAATTTAATAAATTAGAAAACATATCATATATAATTCCTAGAGTGGAAATATACAACTAATTTCAAGTCATACTTATCATATTATTTTATCTAAAATAATTACATCTTTTAGAATCTATTGCTTGTAAAATAATAAAAGGTTGACTTTTATTTTGGTGAAAATCATCTTCGGTATATTGAGAAATCATGTCACACTACATAAGCAATTCAATAGGAGCATCATATTTTCATTATTCAACTAACAATATACTCTACTTAATTTTTTTAATTTAACATAAATCTAATATGAAAAGCAAACATTCAATATTTTTAAAAAAAATAGCAACACAATAATTATTATTACAGAACGGAAAAAAAAGCAATTGTTGCAATATACCAAATTGTTAATAAACACTTATAAATTTATAATATATAAAAAAATACTAATAAAATACAAAAACTCTATAGAAAATCTCTTCAAAATTGTTACTTTTAGCAACTAAGTAAAATAAGAAAAACTATATAACTTGCACATTAATTACTTTAGGGGGTTATCCACATGAAAGGTTTTGAAGTCATGAATATTATTAATTAACAATTAACAATTAAAAATAAGTTACATATATAAAAAAATGTTAATTATGCAAAATAATACAATTAAGTAATTATTTGGAGAGGAAATTTTAAAAATATATTTTACAATATCACACTGGTGAAGAAAAATAAAAAACATGTTAAATAATTTAGAGAAAAGATAAATGCGATCGGAGGTGATAGAAATGTACCACGTCATCTTATCTATTTCTAACATTCTAACTTTATATGTAAATAGATATATTGGTTGTAAGTAAATAATAAAGAGAAAATAACTTAAAATATTTTTTTAAAATTGTTATTCTAAAATTATAATCAGAAGAAGGTCAAAAAAAAAGAAGGAAAAGAAAGTGGAAAATCAATCTATTAGGATTGGAAATTAGATGTGAGTTATGGATGATTATTATTTACTCCTAATAAAGTAGTATGTGAATTTTTTTTTATTGTAAATGTTTCTCTATTAATAAAATTTATTTTTAATTAATTAAGTAAATTACTTTTACAAAAGTTAATTAATTTAAATAAGAAAAAAGGTCAACAAAGACAAGATAAATGTCACATCACTTTCTTTTATGTTTCTCATTTTCAATAATTAAGAGAAGTTAAATAAATTACACTTTTTAGTTTTAATATAATTAATGTGACTAAGGGAAAAAAATTTCTTCATTCTTTTCATTAAATAATTTATTTATTCATTAAATTTTTTAAAAGTACTAAAAAATGATTAATTTATTTTTTGTTTAGTCTATGACTATTTTTTAATATGATAAACTACTTCATATCATATATTTTTTAGGGACATCAATATGCAATAGCTATAAGAAATGTATCATGTGCAATATTATATTTTTCAACTGTAACAAAAATTAAAATATTAATTAGAACTTGACGAAAAAATTACATAAAAATAAAACTATATAACTTTTCATCTTCATTCATTCACATAATAATAATAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAATAATAATAATAATAATAAGAAAAAGAGCAAAGTAAAATGAAGAAAATAATGTTAATTGAGCTTTCTAATGTGTTAATTAGTAGAGTTTCATAATTTATTTTTTGTTGAATAACATGAAATTATATATCTAACTAAAAAATATAATCAAAACAATACATGAATGAATTAATCTTCAAAATATTTGGAAATCATTCAAACTTTTTTTTACTAATATGACCATCTTCTTGATGAAATCTTGAAATAATTATGATTCCTTCTTCATTTTCATAAACTTGTACCAAACTAATGCAAACATCAATTTGATGAATCTTGAAGAATATATCTATGATCTTTATCAATATGAAGATCATGTGGTGAACTTATTAAGTACATGATTGATGAAAAAGATGAAGAAAAAAATGTAAAAGAGGAAAAAACTATACTAATAAAAAGAAAGAATGAGAAAATGAGAATGATCATTGAACATAGATAGTTGTTATTTATAGTTTGTGTAAACCATAAGAATAATTAAAAATAAGTTAAAAAGACATATTATTTAAGTAGGGAATATAAATAGATGGAGGTTTTATTTTAACTTATTAGGTATAATTAGAATAATAAATATGAATGAATTTTTTAATTAATAAACAAATTATAAAATGAAAAGAAATGAAAAAAAAAGGAAAAAAAGAAATTGAACAGCTCCTCTATGATCCTCATATATATATATATATATATATATATATATATATATTGATTGGATTTGGGCTAAGTGGAGAAAGCTTATCATTAATTACTGAAATTTGTGTATAGTTTATGTCTCTTAAAATTTATGCACATTTTAACTAATAAATATGTGGTCAAAATATCACTGACACAAAAGTAACAAATAACTTTTTGTGAATCAAATATTTCTGTATCATAATTTCTCACAAGACATGTTATAAAAGACATAATAAATTATGTCCTGATACCAAATAACAAAGAACTTTTTGTAGTATACATTTATATGCTTTTACTATTAACATCCCACAAGTTATTTAATTTTACTTTTAAAAAACAGGCCTACACATACTTTATAGTTCCACATTAGCTATCAATATTTTTTCTCAAAAAGAGATAAATAACATACATCTCAAAAGTCAAACTCGTGTTACAAAACACTATGACAAATTCTGAAAAATATTACACAACTTGTATCGAGTGAGATAATAATTTTTAAATCTATCGCGAGCAAATTAGATCGAAATAAATAAGTGTACTTTGATCTATAATATTTTGATTAAATGATAACTAAAGAAAAAAACTAAAGATCATTAGATTTAAGGGTGAAGTCAAAGACCAACCCAAAATAAGGACAGTCAATGCAAAAACTTAAATTTCAAGGTTACTTACCAGTATGCATAAAAATGATTCTATTGATACATTCAGATAATTAACCATTTCATAATTAGTAAAAAAATTTATTGTTATAACCACAAAAATTCTTTTCAACAAATGGTTATATGTATATGCAATATATCAATATTTATTCATAACCTATTTATATTGTATAAACAGTGTATAATCATATATAAATGATGTATAGCTGTGTATAAGAGATGTATATAGATGTGAACTACATTATTTATACAATATTTATACATTACATATCAATCTTTTTCATCTCAATCACCTTTAATATCCACTAAGTAATCCCAAAATTTTGATATGAGCTCCTTTCAATATTTTGAGTCTTTTGATATATTATTTTCTTGAAACGATATATATGTGTGACACATTAATTTTGAAAATGTAAAAGAAGACGAATGAAGGAGAAAAACATCTACGATATAAGGAAGAAGGAGGAGAGAAGAAATATGTCACGACCCAAACCGGGTTGCGACTGACACCCACACTAACCCTCCTATGTGAGCGAACCAACCAATCTAAACCTTAACATTTCAATGTAATATCAACATAAAGTAATGCGGAAGACTTAAACTCATTAATAAAAACCAATTCAATAACTATTATTTCCCAAAATCTGGAAGTCATCACCACAAGAACATCTATGATCAAATTACTAAACTAAGAGTATTCTAAGAAGCTAAAACAAATAAAAGCTAGTCCATGCCGGAACTTCAAGGCATCAAGACATGAAGAGGAAGATCCAGTCCAAGCTAGAAGCATTAGCTCACCCTGATATCCGGAGTAATGAAGACCGACTAGAGTTACTGTTGAGTCGAAGATGACGGCACGTTTGCTGCACTCTACAAATAAACAAGAAGAAAACATAAAAGTAGGGGTCAGTACAAAACACGGGTACTGAGTAGATATCATCGGCCAACTCAAAATAGAAATCGATATATACCAAGTAATATCATAAAATCAACTATGATACTCAACATGTAGCAACAACAAGCACTATATCATTAACAAATACCATTAAGTTCACACATGAGGACTCAAGCCTCAATACCATACTCATTTGGGAATGATGTTCATTAGATTGAGTATATTAACATCTTTCAAGATTCATTATCTTTATTTCTCTTGTGTCGGTACGTGACACTCCGCTCCCTCATATTCATTAATCCTTTTGTGTCGGTAAGTGACACTCCGATCTCCTAAATCTACGTGTCGGTTCGTGACACCCATTCCCCTAAACCTACGTGTCGGTTCGTGACACCCGATCCCCTAAATCTATGTGTCGGTTCGTGACACTTGATCCCCTAAATCTACGTGTCGGTTCGTGACACCCGATCCCCTAAATCTACGTGTCGGTTCGTGACACCCGATCCCCTAAATCTACGTATCGGTTTGTGACACCCGATCCCCTAAATCTATGTGTCGGTTCGTGACACCCGATCCCCTAAATCTATGTGTCGGTTCGTGACACCCGATCCCCTAATCTCCTTCTACCAATTCATCAAGCCTTCTTTCTTACCAAGGCATCATCAATCTCATTATTTTAGTTCATCACGCCTTCTTTATACCAAGGCCTCATCATTAACAAAGAGATTAGGGTTTTGCAAGATTCGGGATTCAATAACTTCGTCATGCTTATATAATCACAATTATATAATTACATTCATGCAAGCATACAATTAAGCACATAGAAGGGTTTACAATATTATCAATACATATCATTCGCTATTAAGAGTTTACTACGAATATCGTAAGAGAAACCATAACCTACCTCCACCGAAGATTCGTGATCAAGCAAGTGATTTCCCAAGCTTTGTGTTTTTTCCTGTCGTTCGATCCCCTTTCTCGTTCGACTTTCTCTCTCTTTCTCTTGTTCTTTCTATTTTCTTTATTCAAACCCTCTTTCTTTTACCCTAATTACTATATAATTAAGAATAAAATATGGCAATAATAACCCACTAATTAACTTAAGGTTACCTCTTTAAACCCCCAAGTAATTAGACTTATTAACATTAACCCACTAACTTTATAATTAAAGCAGGAATAGTCAAAAATGTCCCTTAAAACAATTGAGGAATTCCGACTCAGAGTGGGATTTACGCAGCCTGTGACGGCCCGTCGTGCCTGCGACGGTCCGTTCTGCAGGTCGTCGCAAGGTTCAGAGACTGGATTTTCACTGAAGACTCTGTGACGGTCCGTCACGCCTGTGACGGTCCGTCCTGCCATTCCGTTACGAAGTTCAGAGAGTCGATTTTCAGTATCCAATTTTAGATTTTCTAAGTGTTTTGAAACGAGACCCTGCGACGGTCTGTCGTGCCCATGACGGTCCGTCGTGGGGTCCGTCATTTCTGCCAGTTTTTCCAGAGTTGAAGTCTGCTGCTCAAAACGACTAAACAGGTCGTTACA</genome_strand>
        <mrna_strand>AAAACACTTAGAAAATCTGAAATTGGGTACTGAAAATCGACTCTCTGAACTTCGTGACGGAATGACAGGACGGACCATCACAGGCGTGACGGACCGTCATAGATTGTTCAGTGGAAATTGACTCTCTGACCCTTGCGACGACCTGCAGGACGGACCGTCACAGTCACGACGGCCCGTCACAGGTTGCGCAAATCCCAGGCAGAATCGGATTTCCTTACACGTTTTAAGGGACGTTTTTGGACTATTCTTTCCTTAATTATAGATTTCGTGGGTTTATATTAATAACTCAAATTCTT-GGGGTTAAAAGAGGTAACCCTAAGTTAATTAGTGGGGTATTATTGCCATCTTTTATTCTTAATTATATGTTAATTTGGGGTAAAAGAAAGAGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................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TGCTGCTCAAAACGACTAAACGGGTCGTTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U326740" ref_strand="+" ref_description="SGN-U326740        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: ATMG00860.1 | Symbol: ORF158 | hypothetical protein | chrM:235916-236392 FORWARD | Aliases: ORF158 (evalue: 2e-15, score=79.3) genbank/nr: RNA-directed(evalue: 2e-101, score=370)">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatgcgaggaagaggatacttgttctttatggttaccttgttcaactgccggtagcctatgcacatccgaaaactccaatccttcttctttacaaacaaaaccggagcaccccaaggagatgcagttggtctaatgaagcctttgctcacaactctttgaagtggtcttttaactctcttaactctgcgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="82774" stop="84086"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83074" g_stop="83786" g_length="713"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="712" r_length="712" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-U326740" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U326740" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83074" e_stop="83786"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACAAATCGGTGGTAGTAGCTCGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTTTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGAATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCCTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCGTCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCGTTCATCAGACTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGCGGTCTTTGGCACATCTGTTGCCCGTATTTTCAATTGATGATAGTCGAATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTATTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCGG</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGCCTATGCACATCCGAAAACTCCAATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCAGTTGGTCTAATGAAGCCTTTGCTC-ACAACTCTTTGAAGTGGTCTTTTAACTCTCTTAACTCTGCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U335935" ref_strand="+" ref_description="SGN-U335935        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|49533772|gb|AAT66771.1| putative polyprotein [Solanum demissum] (evalue: 2e-78, score=295)">
      <seq>tcaatgcgaggaagaggatacttgttcttaatagttaccttgttcagttgtctgtagtctatgcacattctaaaacttccatccttcttcttcacaaataaaactggagcaccccaaggagatgcacttggtctaatgaagaccttgctcaacaactcttgaagttgagcctttaactctcttaattcggcgggagccattctataagggggtatagaaatggggcgtgtgcctggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcaggaaacacgtccaaaaactcgcggactaccgaaaccgactcaattgagggtacttgagtagtgtcatccttgagatgtgccaagaaagctgaacaccctttactaaccattttcttagcacgaagaaaggatatgatacgcaccagattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaacgtcaccgttttagcattacaatccaagatcgcaaaatttggagaaagccaagtcatacccagaattacatcaatgtcacccatttctaaaaaaccaaatctacataagtgttgctccccacgaaattcnacaaaacagaactatgtaccttttcaactaccac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="83294" stop="84553"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83594" g_stop="84253" g_length="660"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="658" r_length="658" r_score="0.909"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-U335935" ref_strand="+">
        <total_alignment_score>0.909</total_alignment_score>
        <cumulative_length_of_scored_exons>660</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U335935" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83594" e_stop="84253"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTATTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTTTATAAGGGGGTATAGAAATGGGGCGAGTACCCGGTTCAAGATCAATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGGACCAACGAAACTGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCATTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACGTACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGTATCTGTCCCAGGCTTGGATAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATATACATAAGTGTTGCTCCCCCACAAAGTTCACCAAACACGACCTATATACCTTTTCAACTACCAC</genome_strand>
        <mrna_strand>TCAATGCGAGGAAGAGGATACTTGTTCTTAATAGTTACCTTGTTCAGTTGTCTGTAGTCTATGCACATTCTAAAACTTCCATCCTTCTTCTTCACAAATAAAACTGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGACCTTGCTCAACAACTCTTGAAGTTGAGCCTTTAACTCTCTTAATTCGGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCTGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGAAACACGTCCAAAAACTCGCGGACTACCGAAACCGACTCAATTGAGGGTACTTGAGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTGAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGATATGATACGCACCAGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAATGTCACCCATTTCTAA-AAAACCAAATCTACATAAGTGTTGCT-CCCCACGAAATTCNACAAAACAGAACTATGTACCTTTTCAACTACCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U335938" ref_strand="-" ref_description="SGN-U335938        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|49533772|gb|AAT66771.1| putative polyprotein [Solanum demissum] (evalue: 4e-59, score=231)">
      <seq>gcaaggtaggatgtaggtcaatgcatatgaggctaagtttcgtgcactatccagatatgccactcaactttgtttcagtccacaagagaggattcgtcgttttgtgaaagggttgaggtcagagttgcggatttcagcgttacaggtagcggctacggcaaaatccttgcaagaaatggttgacttcgatgtaattctgggtatgacttggctttctccaaattttgcaatcttggattgtaatgctaaaaccgtgacgttagccaagcctgggacagatctgttagtgtaggagggtgactacacttccaatccggtgcgtatcatctcctttcttcgtgctaagaaaatggttagtaaagggtgtttagctttcttggcacatctcaaggataacactacccaagtaccttcgattgactcagtttcagtagttcgtgagtttatggatgtgttccctgcagatcatcctggtatgccaccggatagggatattgacttctgtattgatctcgaaccgggcacacgccccatttttatacccccttatagaatggctcccgcagagttaagagagttaaaggcacaacttcaagagttattgaacaaaggcttcattagaccaagtgcatctccttggggtgctccggttttgttgtaaagatcggcagtttttgaatgtgcatagactaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="85389" stop="83382"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85089" g_stop="84917" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="0.942"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="84916" i_stop="84174" i_length="743">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.021" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="84173" g_stop="83646" g_length="528"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="694" r_length="521" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-U335938" ref_strand="-">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>701</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335938" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="85089" e_stop="84917"/>
          <exon e_start="84173" e_stop="83646"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAGGTAGGATGTCGGTCAATGCATATGAGGCTAAGTTTTATGCACTATCTAGATATGCCACCCAACTTTGTTTCAGTCCACAAGAGCGGATTCGTCGTTTTGTGAAGGGGTTGAGGTCAGAGTTGCGGATTTCAGCCTTACATGTAGCGGCTACGGCAAAATCCTTCCAAGAAGTAGTAGATTTCGTGGTAGAGGTGGAAGGAGTGAAGCCAGATGAATTCACCATGGCATCGACATCAAAGAGGTTTCGAAAGGGAGGTGAGTTTAATGGTTCTTACTCTAGAGGACAGGGTTCCGGAGGTTACTCAGTTCGACCCATTTAGTCTTCACTGCAAACTGTAGATGGGGGTCCACCTCAGACCGGTCAACACTTCTCTGAGAGACCTATGCTTGACTCTAGAGTGTTATGGATGTGGGGAGATTGGACATATTAGGAGAAATTGTCCAAAACAGAGTTATAGACCCCCAATGGCTAGAGGTAGAGGTGGTCATGGTAGAGGCCGTTATTCTGGAGCACGTGGTGGTCGAGGTAATGGTGGTCACCAAAATGGTCGAGGTGATGGGCAAACTGGAGCCACTACATCACAACATGGTAGGGGCAATGGAAAGACAAACAATAGGGCCCATTGTTACGCTTTCCCTGGGCGGTCTGAAGCGGAGGCATCTGATGCTGTCATCACAGGTAATCTTCTGGTTTGTGATTGCATGGCTTCTGTATTGTTTGATCCTGGATCCACATTTTCTTATGTATCTTCCTCATTTGCTAATGATCTAAATTTACATTGTGAATTACTTGATATGTCTATTCGTGTTTCTACTCCGGTGGGTGAGTCTGTGGTAGTTGAAAAGGTATATAGGTCGTGTTTGGTGAACTTTGTGGGGGAGCAACACTTATGTATATTTGGTTATCTTAGAAATGGATGATTTTGATGTAATTCTGGGTATGACTTGGCTTTCTCCGCAATTTGCGATCTTGGATTGTAATGCTAAAACGGTGACGTTATCCAAGCCTGGGACAGATACGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTACGTATCATCTCCTTTCTTCGTGCTAAGAAAATGGTTAGTAAATGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTGAGTCAGTTTCGTTGGTCCGTGAGTTTCTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCAGATAGGGATATTGACTTCTGTATTGATCTTGAACCGGGTACTCGCCCCATTTCTATACCCCCTTATAAAATGGCTCCCGCGGAGTTAAGAGAGTTAAAAGCCCAACTTCAAGAGTTGTTGAGCAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGGTTTTGTTTGTAAAGAAGAAGGATGGGAGTTTTCGGATGTGCATAGACTACC</genome_strand>
        <mrna_strand>GCAAGGTAGGATGTAGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCCAGATATGCCACTCAACTTTGTTTCAGTCCACAAGAGAGGATTCGTCGTTTTGTGAAAGGGTTGAGGTCAGAGTTGCGGATTTCAGCGTTACAGGTAGCGGCTACGGCAAAATCCTTGCAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGTTGACTTCGATGTAATTCTGGGTATGACTTGGCTTTCTCCAAATTTTGCAATCTTGGATTGTAATGCTAAAACCGTGACGTTAGCCAAGCCTGGGACAGATCTGTTAGTGTAGGAGGGTGACTACACTTCCAATCCGGTGCGTATCATCTCCTTTCTTCGTGCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATAACACTACCCAAGTACCTTCGATTGACTCAGTTTCAGTAGTTCGTGAGTTTATGGATGTGTTCCCTGCAGATCATCCTGGTATGCCACCGGATAGGGATATTGACTTCTGTATTGATCTCGAACCGGGCACACGCCCCATTTTTATACCCCCTTATAGAATGGCTCCCGCAGAGTTAAGAGAGTTAAAGGCACAACTTCAAGAGTTATTGAACAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGGTTTTG-TTGT--A-AAG-A--TCGGCAGTTTTTGAATGTGCATAGACTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U317065" ref_strand="+" ref_description="SGN-U317065        Tomato 200607 #1 [3 ESTs aligned] genbank/nr: gi|49533772|gb|AAT66771.1| putative polyprotein [Solanum demissum] (evalue: 3e-84, score=314)">
      <seq>cggaaactcccatccttcttcttcacaaacaaaatcggagcaccccaaggagatgcacttggtctaatgaaacctttgctcaacaactcttgaagttgggcctttaactctcttaactctacgggagccattctataagggggtatagaaatggggcgtgtgcccggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcagggaacacatccaaaaactcacagactataaaaaccgactcaatcgaaggtacttgggtagtgtcatccttgagatgtgccaagaaagctaaacaccctttactaaccattttcttagcacgaagaaaggagatgatgcacaccggattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaatgtcaccgttttagcattacaatccaagatcgcaaattgcggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaaatctacataagtgttgctccccacaaagttcaccaaacaagacctatataccttttcaactaccacagactcacccaccggagtagaaacacgaataggcatatcaagtaattcacaatgtaaatttagaccgttagcaaatgaggaagatacantagaaaacgtggatcccaggatcaacaatacagaagccatgcaatcacaatcgaaagattacctgtgatgacagcatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="83363" stop="84721"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83663" g_stop="84421" g_length="759"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="757" r_length="757" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-U317065" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>759</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U317065" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83663" e_stop="84421"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTTTATAAGGGGGTATAGAAATGGGGCGAGTACCCGGTTCAAGATCAATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGGACCAACGAAACTGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCATTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACGTACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGTATCTGTCCCAGGCTTGGATAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATATACATAAGTGTTGCTCCCCCACAAAGTTCACCAAACACGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGACATATCAAGTAATTCACAATGTAAATTTAGATCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGAT-CCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATC</genome_strand>
        <mrna_strand>CGGAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAACCTTTGCTCAACAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCTACGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCCGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAAAAACTCACAGACTATAAAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATGCACACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAATGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCT-CCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCGTTAGCAAATGAGGAAGATACANTAGAAAACGTGGATCCCAGGATC-AACAATACAGAAGCCATGCAATCACAATCGA-AAGATTACCTGTGATGACAGCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U335930" ref_strand="+" ref_description="SGN-U335930        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: hypothetical(evalue: 7e-35, score=150)">
      <seq>aaacacgaataggcatatcaagtaattcacaatgtaaagttagaccattagcaaatgaggaagatacataagaaaatgtggatccaggatcaaacaatacagaagccatgcaatcacaaaccaaaagattacctgtgatgacaacatcagattcctccgcttcagaccgcccagggaaagcgtaacaatgggccctatcattcttatgtctgttgcccctaccatgttgtgatgtagtggctccagtttgcccatcacctcggccgttttggtgaccaccatttcctcgaccgccacgtcctccagaataacggactctgccatgaccacctctacctctaacctttggaggtctgtaactctgttttggacaatatctcttaatatgtccaatctccccacacccatagcactctctgggttcatgcataagtctctcagagaagtgttgaccggtcgaaggtggacccccaactacagtctgtagtgaagactgaattggtcggactgagtaacttcccgaaccctgtcctctagtgtaagcaccattaaactcacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="83974" stop="85130"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84274" g_stop="84830" g_length="557"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="559" r_length="559" r_score="0.912"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-U335930" ref_strand="+">
        <total_alignment_score>0.912</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U335930" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84274" e_stop="84830"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACACGAATAGACATATCAAGTAATTCACAATGTAAATTTAGATCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATTGTTTGTCTTTCCATTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGTTTGCCCATCACCTCGACCATTTTGGTGACCACCATTACCTCGACCACCACGTGCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCCATTGGGGGTCTATAACTCTGTTTTGGACAATTTCTCCTAATATGTCCAATCTCCCCACATCCATAACACTCT-AGAG-TCAAGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCATCTACAGTTTGCAGTGAAGACTAAATGGGTCGAACTGAGTAACCTCCGGAACCCTGTCCTCTAGAGTAAGAACCATTAAACTCACC</genome_strand>
        <mrna_strand>AAACACGAATAGGCATATCAAGTAATTCACAATGTAAAGTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAAAAGATTACCTGTGATGACAACATCAGATTCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCATTCTTATGTCTGTTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGTTTGCCCATCACCTCGGCCGTTTTGGTGACCACCATTTCCTCGACCGCCACGTCCTCCAGAATAACGGACTCTGCCATGACCACCTCTACCTCTAACCTTTGGAGGTCTGTAACTCTGTTTTGGACAATATCTCTTAATATGTCCAATCTCCCCACACCCATAGCACTCTCTGGGTTCATGCATAAGTCTCTCAGAGAAGTGTTGACCGGTCGAAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTGAGTAACTTCCCGAACCCTGTCCTCTAGTGTAAGCACCATTAAACTCACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U317064" ref_strand="+" ref_description="SGN-U317064        Tomato 200607 #1 [6 ESTs aligned] genbank/nr: gi|47824972|gb|AAT38745.1| putative polyprotein, 3'-partial [Solanum demissum] (evalue: 5e-64, score=248)">
      <seq>acgaataggcatatcaagaaattcacaatgtaaatttagaccattagcaaatgaggaagatacataagaaaacgtggatccaggatcaaacaatacggaagccatgcaatcacaaactagaagattacctgtgatgacagcatcagatgcctccgcttcagaccgcccagggaaagcgtaacaatgggccctatcgtttgtctgcccattgcccctaccatgttgtgatgtagtggccccagtttgcccattacctctgccgttttggtgaccaccattacctcgaccaccacgtcctccagaataacggcctctaccatgaccacctctacctctagctattgggggtctataacttggtccgggacaatttatcctaatatgtccaatctccccacatccataacattctctggagtcactcataggccccttggagaagtgttgaccggtctgaggtggacccccaactacagtctgtagtgaagactgaatgggtcgagctgagtaacctccggaaccttgtcctctagagtaagaacccttaaactcacctccctttcgaaacctctttgatgtcgatgtcgtggtgaagtcgtctggcttcactccttccacttctatcacaaagtctaccacttcttggaaggattttgccgttgccgctacctgtaaggacgaaatccgcaattctgacctcaaccccttcacaaaccggcgaatccgctcttgaggactgaaacagagttgagtggcatatctggatagtgcacgaaacttagcctcataagcattaactgacaccctaccttgctctaggctcaagaactcatcccttttcttatccctcaaagtccgggggatatacttctccataaacaaactatagaatgaggcccaagtcataggtgatgcctctattggttgacactcgatatgtgaccgccaccacatttgggcgttcccttgaaactgataagtcacaaactccacaccaaaccgttctactatacccatcttgtgtagtagctcgtgacagtcaaccagaaaatcataagcatcctccgattcagcacccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattatagggacagtagtcaaacgtggaaatgtgcctatgtccaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataacccgctaagataagccagaacctgattgatcatctctggggtaggttggggtggcatttcctcattttgcacttgttcagtttccccatccctccctttctctattacttcctcagtcagtggaagagtcactgccctagtatcagatgggct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="83978" stop="86012"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84278" g_stop="85712" g_length="1435"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1437" r_length="1437" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-U317064" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>1435</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U317064" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84278" e_stop="85712"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGAATAGACATATCAAGTAATTCACAATGTAAATTTAGATCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATTGTTTGTCTTTCCATTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGTTTGCCCATCACCTCGACCATTTTGGTGACCACCATTACCTCGACCACCACGTGCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCCATTGGGGGTCTATAACTCTGTTTTGGACAATTTCTCCTAATATGTCCAATCTCCCCACATCCATAACA--CTCTAGAGTCAAGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCATCTACAGTTTGCAGTGAAGACTAAATGGGTCGAACTGAGTAACCTCCGGAACCCTGTCCTCTAGAGTAAGAACCATTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTCGATGCCATGGTGAATTCATCTGGCTTCACTCCTTCCACCTCTACCACGAAATCTACTACTTCTTGGAAGGATTTTGCCGTAGCCGCTACATGTAAGGCTGAAATCCGCAACTCTGACCTCAACCCCTTCACAAAACGACGAATCCGCTCTTGTGGACTGAAACAAAGTTGGGTGGCATATCTAGATAGTGCATAAAACTTAGCCTCATATGCATTGACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAGCTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTCCGTTGGTTGACACTCAACATGTGACCGCCACCACATTTTGGCGTTCCCTTGAAACTGATAACTCACGAACTCAACACCAAACCGTTCTACTATGCCCATCTTTTGTAGTAGCTCATGACAGTCAACCAGAAAATCGTAAGCATCCTCAGATTCAGCACCCTTGAAGACTGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTTATGCTGATCATTTGTCATTATAGGCCTAGTAGTCAGACGTGGAAACGTGCCTATGTCCAATGAGGCATCCATACAAGGAGCCATAGTGGCTGCATGTTGTACCTCTGAAACCGGGGGTGTTGGTGCAGAAAACACTGGAAGGGCCTGACCCTGATCAGACAACCCACTAAGATAAGCGAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCAATTCCTCATTTTGCACTTGTTTATTCTCCCCTTCCTCACCCTCTCT-TACCACTTCCTTAGTCGGTGGAGGAGTCACCGCCCTAGTATCAGACGGGCT</genome_strand>
        <mrna_strand>ACGAATAGGCATATCAAGAAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAACGTGGATCCAGGATCAAACAATACGGAAGCCATGCAATCACAAACTAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGCCCATTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCGTTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGGGTCTATAACTTGGTCCGGGACAATTTATCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTGGAGTCACTCATAGGCCCCTTGGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATGGGTCGAGCTGAGTAACCTCCGGAACCTTGTCCTCTAGAGTAAGAACCCTTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTCGATGTCGTGGTGAAGTCGTCTGGCTTCACTCCTTCCACTTCTATCACAAAGTCTACCACTTCTTGGAAGGATTTTGCCGTTGCCGCTACCTGTAAGGACGAAATCCGCAATTCTGACCTCAACCCCTTCACAAACCGGCGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACTGACACCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCTTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAACTATAGAATGAGGCCCAAGTCATAGGTGATGCCTCTATTGGTTGACACTCGATATGTGACCGCCACCACATTTGGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAGAAAATCATAAGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGGACAGTAGTCAAACGTGGAAATGTGCCTATGTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGTTCAGTTTCCCCATCC-CTCCCTTTCTCTATTACTTCCTCAGTCAGTGGAAGAGTCACTGCCCTAGTATCAGATGGGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U335931" ref_strand="+" ref_description="SGN-U335931        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|47824972|gb|AAT38745.1| putative polyprotein, 3'-partial [Solanum demissum] (evalue: 1e-33, score=146)">
      <seq>acctagcccatctggtactaaggcggtgacacctccaccaactgaggaagtggtaagagagggtgaggatggggagaatgaacaagtgcagaatgaggaattgccaccccaacctacccaagagatgatcaatcaggttcttgcttaccttagcgggttatctgatcaaggccaagcacctccagtgttttctgcactagcacctcaggctccggaggtacaacatgcgcctactgtgactccccgcatcgatacctcattggaaataggaacgtttccccgtctgactacagggcctataatgacaaatgatcagcatgaactttttagtaagttcttgaaattgaaacctcaagtctacaagggtgttgaatctgaggatgcctacgattttctggttgactgtcatgagctactacacaagatgggtatagtagaacggtttggtgttgagtttgtgacttatcagtttcaagggaacgccaaaatgtggtggcggtcacatgttgagtgtcaaccaacagaggcaccacgtatgacttgggcatcattct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="86016" stop="84863"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85716" g_stop="85163" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="554" r_length="554" r_score="0.903"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-U335931" ref_strand="+">
        <total_alignment_score>0.903</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335931" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85716" e_stop="85163"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCTAGCCCGTCTGATACTAGGGCGGTGACTCCTCCACCGACTAAGGAAGTGGTAAGAGAGGGTGAGGAAGGGGAGAATAAACAAGTGCAAAATGAGGAATTGCCACCCCAACCTACCCCAGAGATGATCAATCAGGTTCTCGCTTATCTTAGTGGGTTGTCTGATCAGGGTCAGGCCCTTCCAGTGTTTTCTGCACCAACACCCCCGGTTTCAGAGGTACAACATGCAGCCACTATGGCTCCTTGTATGGATGCCTCATTGGACATAGGCACGTTTCCACGTCTGACTACTAGGCCTATAATGACAAATGATCAGCATAAACTTTTCAGTAAGTTCTTGAAATTGAAACCTCCAGTCTTCAAGGGTGCTGAATCTGAGGATGCTTACGATTTTCTGGTTGACTGTCATGAGCTACTACAAAAGATGGGCATAGTAGAACGGTTTGGTGTTGAGTTCGTGAGTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACGGAGGCACCACCTATGACTTGGGCCTCATTCT</genome_strand>
        <mrna_strand>ACCTAGCCCATCTGGTACTAAGGCGGTGACACCTCCACCAACTGAGGAAGTGGTAAGAGAGGGTGAGGATGGGGAGAATGAACAAGTGCAGAATGAGGAATTGCCACCCCAACCTACCCAAGAGATGATCAATCAGGTTCTTGCTTACCTTAGCGGGTTATCTGATCAAGGCCAAGCACCTCCAGTGTTTTCTGCACTAGCACCTCAGGCTCCGGAGGTACAACATGCGCCTACTGTGACTCCCCGCATCGATACCTCATTGGAAATAGGAACGTTTCCCCGTCTGACTACAGGGCCTATAATGACAAATGATCAGCATGAACTTTTTAGTAAGTTCTTGAAATTGAAACCTCAAGTCTACAAGGGTGTTGAATCTGAGGATGCCTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACGTATGACTTGGGCATCATTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U335073" ref_strand="+" ref_description="SGN-U335073        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: beta-galactosidase(evalue: 3e-30, score=135)">
      <seq>ttaggttcgttggtctcatcacacaagaacaggtctagtagagtctttaggaacggtagggggacgcctttacttttctttgagaggctataagactttaggaaaatttcaccctttcattctttctttcgtgctactacttgagtccaattggtatctaggcgatacaaattggtatctgaccatcttcactctcttttgcagatggttagaactagagcaacgaccacgtcaacaccaacaccggccagacaagaaacaactgagccagccactggggctgtgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="86368" stop="85483"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86068" g_stop="85783" g_length="286"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="286" r_length="286" r_score="0.902"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-U335073" ref_strand="+">
        <total_alignment_score>0.902</total_alignment_score>
        <cumulative_length_of_scored_exons>286</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335073" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86068" e_stop="85783"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGGTTCGTTGGTCTCATCACACAAGAACGAGTCTGGTAGAGTCTTAAGGAACGGTAGGGGGACACCTTTACTTTTCTTTGAGGGGCTATAAGACTTTAGGAAAATTCCATTCTTTCATTCTTTCTTTCGTGCTATTACTTGGGTCCAATTGGTATCTAGGTGATACAAATTGGTATCTGACCATCTTCACTCTTTTTCGCAGATGGTTAGAACTAGAGCAATAATTGCGCCAACACCAACATCGGCAAGACAAGAAGCGTCCGAGCCAGCCACTGGGGCTGTAG</genome_strand>
        <mrna_strand>TTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGAGTCTTTAGGAACGGTAGGGGGACGCCTTTACTTTTCTTTGAGAGGCTATAAGACTTTAGGAAAATTTCACCCTTTCATTCTTTCTTTCGTGCTACTACTTGAGTCCAATTGGTATCTAGGCGATACAAATTGGTATCTGACCATCTTCACTCTCTTTTGCAGATGGTTAGAACTAGAGCAACGACCACGTCAACACCAACACCGGCCAGACAAGAAACAACTGAGCCAGCCACTGGGGCTGTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U315285" ref_strand="+" ref_description="SGN-U315285        Tomato 200607 #1 [6 ESTs aligned]">
      <seq>tagtcttcggtggaggtaggttattgtttctcttacgatattcgtagtaaactcttaatagagaatgatatgtattgataatattgtaaaccctgctatgtgcttaattgtatgcttgcatgaatgtaactatataattgttattatataagcatgatgaagttattgaatcccaaatcttgtaaaaacctaatctctttttaatgatgatgccttggtaagggagaaggcttgatgaactaaagtaatgagattgatgatgccttggtaagggagaaggcttgatgaattgatagaatgagattaggggatcgggtgtcacgaactgacacgtagaattaggggatcgggtgtcacaaaccgacacgtagattaagggatcaggtgtcacgaaccaacacatagattaggggatcgggtgtcacgaaccgacacgtagatttaggggatcgggtgtcacgaaccgacacgtagatttaggggatcgggtgtcacgaaccgacacgtagatttaggggatcaggtgtcacgaaccgacacgtagatttaggggatcggagtgtcacgttccgacatatagatttaggggatcggagtgtcacgtaccgacacaagaggattaatgaatattgagggagcggagtgtcacgtaccgacacaagagaaataaagataatgaatcttgaaagatgttaatatactcaatctaatgaacatgattcccaaatgagtatggtattgaggcttgagtcctcatgtgtgaacttgacggtaattgttaatgatatagtatttgttgttgctacatgttgagtatcatagttgattttatgatattacttggtatatatattgatttctattttgagttggccgatgatatctactcagtacccgtgttttgtactgacccctacttttatgttctcttcttgtttatttgtggagtgcagcaaacgtgccatcgtcctcaactcaacagtaattcaagccagtcttactacatcggaaattcagggtgagctaatgcttctagcttggactggatcttcttcttcaagtctcgatgccttgaacttccggcatggactagcttcttatgtatttttagcttttagaatactcatagtttagtcatttgatcgtagatgttcttgtgatgatgacttccagattttggggaataatagatgttgaattttagaagttaatgaattggtctgtatttaatgagtttaagtcttccacattactttctgttgatattatattgaaatgttaaggttagattggttggttcgctcacataggagggtaagtgtgggtgccagtcgcaacccggttttggtcgtgacaaacttggtatcagagcattaggttcgttggtctcatcacacaagaacgagtctagtagagtcttaaggaacggtagggggatgcctttacttttccttgagaggctataagacttttggaaaattccattctttcttctttcgtgctattacttgggtccaattggtatctaggtgatacaaattggtatctgaccatcttcactctatttcgcagatggttagaactagagcaacgactacgccagcatcaacaccagcaccggcgggacagggtgcgactgagccagccactggggctgtgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="87720" stop="85483"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87421" g_stop="85827" g_length="1595"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1610" r_length="1610" r_score="0.900"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-U315285" ref_strand="+">
        <total_alignment_score>0.900</total_alignment_score>
        <cumulative_length_of_scored_exons>1595</cumulative_length_of_scored_exons>
        <coverage percentage="0.961" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U315285" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87421" e_stop="85827"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCTTCGGTGGAGGTAGGTTATGGTTTCTCTTACGATATTCGTAGTAAGCTCTTAATAGCGAATAATATGTATTGATAATATTGTAAACCCTTCTATGTGCTTAATTGTGTGCTTGCATGAATGTAATTATATAATTGTGATTATATAAGCATGATGAATTTATTGAATCCCAAATCTTGCAAAACCCTGATCTCTTTGTTAATGATGAGGCCTTAGT-ATAAAGAAGGCGTGATGAACTAAAATAATGAGATTGATGATGCCTTGGTAAGAAAGAAGGCTTGATGAATTGGTAGAAGGAGATTAGGGGATCGGGTGTCACGAACTGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACGTATATTTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAGCCGACACGTAGATTTAGGGGATCAGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCAACACGTAAATTTAGGGGAACGG-GTGTCACGAACCGACACGTAGATTTAGGGGATCGGAGTGTCACGTACCGACACAAGAGGATTAATGAATA-TGAGGGAGCGGAGTGTCACGTACCAACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAATGAGTATCATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTAACGGTATTTGTTAATGATATAGTGCTTGTTGTTGCTACATGTTGAGTATCATAGTTGATTTTATGATATTACTTGG--TATATATCAATTTCTATTTTGAGTTGGCCGGTGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTTTCTTCTTGTTTATTTGTGGAGTGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCTAGCCAGTCTTCATTACTCCGGATA-TCAGGGTGAGCTAATGCTTCTAGCTTGGACTGGATCTTCCTCTTCATGTCTTGATGCCTTGAAGTTTCGGCATGGACTAGCTT-TTAT-TTGTTTTAGCTTCTTAGAATACTCTTAGTTTAGTAATTTGATCATAGATGTTCTTGTGGTGATGACTTCCAGATTTTGGGAAATAAT--A-GTT--A--TT-GAA--T--TG-GTT--T-T-TA-TTAATAAGTTTAAGTCTTCCGCATTACTTTATGTTGATATTACATTGAAATGTTAAGGTTTAGATTGGTTGGTTCGCTCACATAGGAGGGTAAGTGTGGGTGCCAGTCGCAACCCGGTTTGGGTCGTGACAAACTTGGTATCAGAGCATTTGGTTCGTTGGTCTCATCACACAAGAACGAGTCTGGTAGAGTCTTAAGGAACGGTAGGGGGACACCTTTACTTTTCTTTGAGGGGCTATAAGACTTTAGGAAAATTCCATTCTTTCATTCTTTCTTTCGTGCTATTACTTGGGTCCAATTGGTATCTAGGTGATACAAATTGGTATCTGACCATCTTCACTCTTTTTCGCAGATGGTTAGAACTAGAGCAATAATTGCGCCAACACCAAC</genome_strand>
        <mrna_strand>TAGTCTTCGGTGGAGGTAGGTTATTGTTTCTCTTACGATATTCGTAGTAAACTCTTAATAGAGAATGATATGTATTGATAATATTGTAAACCCTGCTATGTGCTTAATTGTATGCTTGCATGAATGTAACTATATAATTGTTATTATATAAGCATGATGAAGTTATTGAATCCCAAATCTTGTAAAAACCTAATCTCTTT-TTAATGATGATGCCTTGGTAAGGGAGAAGGCTTGATGAACTAAAGTAATGAGATTGATGATGCCTTGGTAAGGGAGAAGGCTTGATGAATTGATAGAATGAGATTAGGGGATCGGGTGTCACGAACTGACACGTAGAATTAGGGGATCGGGTGTCACAAACCGACACGTAGA-TTAAGGGATCAGGTGTCACGAACCAACACATAGA-TTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCAGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGAGTGTCACGTTCCGACATATAGATTTAGGGGATCGGAGTGTCACGTACCGACACAAGAGGATTAATGAATATTGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAATGAACATGATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTGACGGTAATTGTTAATGATATAGTATTTGTTGTTGCTACATGTTGAGTATCATAGTTGATTTTATGATATTACTTGGTATATATATTGATTTCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTCTCTTCTTGTTTATTTGTGGAGTGCAGCAAACGTGCCATCGTCCTCAACTCAACAGTAATTCAAGCCAGTCTT-ACTACATCGGAAATTCAGGGTGAGCTAATGCTTCTAGCTTGGACTGGATCTTCTTCTTCAAGTCTCGATGCCTTGAACTTCCGGCATGGACTAGCTTCTTATGTATTTTTAGCTT-TTAGAATACTCATAGTTTAGTCATTTGATCGTAGATGTTCTTGTGATGATGACTTCCAGATTTTGGGGAATAATAGATGTTGAATTTTAGAAGTTAATGAATTGGTCTGTATTTAATGAGTTTAAGTCTTCCACATTACTTTCTGTTGATATTATATTGAAATGTTAAGG-TTAGATTGGTTGGTTCGCTCACATAGGAGGGTAAGTGTGGGTGCCAGTCGCAACCCGGTTTTGGTCGTGACAAACTTGGTATCAGAGCATTAGGTTCGTTGGTCTCATCACACAAGAACGAGTCTAGTAGAGTCTTAAGGAACGGTAGGGGGATGCCTTTACTTTTCCTTGAGAGGCTATAAGACTTTTGGAAAATTCCATTC--T--TTC-TTCTTTCGTGCTATTACTTGGGTCCAATTGGTATCTAGGTGATACAAATTGGTATCTGACCATCTTCACTCTATTTCGCAGATGGTTAGAACTAGAGCAACGACTACGCCAGCATCAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U335319" ref_strand="+" ref_description="SGN-U335319        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>gaaaaactggcagaaatgacggaccccacgacggaccatcatgggcacgacggaccgtcgcagggtctcatttcaaaacacttaggaaatctgaaattgggtactgaaaatcgactctctgaacttcgtaacggaatggcaagacggaccgtcacaggcgtgatggaccatcacagagtcttcagtgaaaatccagtctctgaaccttgcgacgacctgcaggacggaccgtcgcaggcacaacgggctgtcacaggctgcgtaaatcccagtctgagtcggaattcctcaattgttttaagggacgtttttgactattcctgctttaattataaagttagtgggttaatgttaataagtctaattacttgggggttaaaagaggtaaccttaagttaattagtgggttattattgccatattttattcttaattatatactaattagggtaaaagaaagagggtttgaataaagaaaatagaaagaacaagagaaagagagagaaagtcgaacgagaaagaggatcgaacgagaggaaaaaacacaaagcttgggaaatcacttgcttgatcacgaatcttcggtggaggtaggttatggtttctcttacgatattcgtagtaagctcttaatagcgaataatatgtattgataatatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="88296" stop="87037"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87996" g_stop="87337" g_length="660"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="660" r_length="660" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-U335319" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>660</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335319" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87996" e_stop="87337"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAACTGGCAGAAATGACGGACCCCACGACGGACCATCATGGGCACGACGGACCGTCGCAGGGTCTCATTTCAAAACACTTAGGAAATCTGAAATTGGGTACTGAAAATCGACTCTCTGAACTTCGTAACGGAATGGCAAGACGGACCGTCACAGGCGTGATGGACCATCACAGAGTCTTCAGTGAAAATCCAGTCTCTGAACCTTGCGACGACCTGCAGGACGGACCGTCGCAGGCACAACGGGCTGTCACAGGCTGCGTAAATCCCAGTCTGAGTCGGAATTCCTCAATTGTTTTAAGGGACGTTTTTGACTATTCCTGCTTTAATTATAAAGTTAGTGGGTTAATGTTAATAAGTCTAATTACTTGGGGGTTAAAAGAGGTAACCTTAAGTTAATTAGTGGGTTATTATTGCCATATTTTATTCTTAATTATATACTAATTAGGGTAAAAGAAAGAGGGTTTGAATAAAGAAAATAGAAAGAACAAGAGAAAGAGAGAGAAAGTCGAACGAGAAAGAGGATCGAACGAGAGGAAAAAACACAAAGCTTGGGAAATCACTTGCTTGATCACGAATCTTCGGTGGAGGTAGGTTATGGTTTCTCTTACGATATTCGTAGTAAGCTCTTAATAGCGAATAATATGTATTGATAATATT</genome_strand>
        <mrna_strand>GAAAAACTGGCAGAAATGACGGACCCCACGACGGACCATCATGGGCACGACGGACCGTCGCAGGGTCTCATTTCAAAACACTTAGGAAATCTGAAATTGGGTACTGAAAATCGACTCTCTGAACTTCGTAACGGAATGGCAAGACGGACCGTCACAGGCGTGATGGACCATCACAGAGTCTTCAGTGAAAATCCAGTCTCTGAACCTTGCGACGACCTGCAGGACGGACCGTCGCAGGCACAACGGGCTGTCACAGGCTGCGTAAATCCCAGTCTGAGTCGGAATTCCTCAATTGTTTTAAGGGACGTTTTTGACTATTCCTGCTTTAATTATAAAGTTAGTGGGTTAATGTTAATAAGTCTAATTACTTGGGGGTTAAAAGAGGTAACCTTAAGTTAATTAGTGGGTTATTATTGCCATATTTTATTCTTAATTATATACTAATTAGGGTAAAAGAAAGAGGGTTTGAATAAAGAAAATAGAAAGAACAAGAGAAAGAGAGAGAAAGTCGAACGAGAAAGAGGATCGAACGAGAGGAAAAAACACAAAGCTTGGGAAATCACTTGCTTGATCACGAATCTTCGGTGGAGGTAGGTTATGGTTTCTCTTACGATATTCGTAGTAAGCTCTTAATAGCGAATAATATGTATTGATAATATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U330684" ref_strand="+" ref_description="SGN-U330684        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | hAT dimerisation domain-containing protein / BED zinc finger domain-containing protein / transposase-related, weak similarity to Tam3-transposase (Antirrhinum majus) GI:16064; contains Pfam profiles PF02892: BED zinc finger, PF05699: hAT family dimerisation domain | chr1:6385798-6388073 FORWARD | Aliases: F25I16.10, F25I16_10(evalue: 2e-09, score=59.7) genbank/nr: gi|54300493|gb|AAV32822.1| transposase [Zea mays] (evalue: 2e-25, score=119)">
      <seq>aagaaatccccaaaaagctctttacatgtaccatcttcacccacttcatctggcaattcatcaagtatatctagtgtgagtggttgtggcaactttgtaaatagaggaagattgagaacgaaacaacaatttgagaagcataaagaagttagttgaagttcaagtaataaatcagaattggaaagatatcttgcggaagatattgagctagatagtgatgactttgatatattaatgtggtggaaagttaatgagccgagatttcctattctcgcggagatggttcgtgatgtgttagccattcctatttcaagtgtcgcatcggaatgtgcattcagcacaggaggtcgtgttcttgatccctttaggagttcattaactcctaaaattgtgcaatctcttatttgtgttcaagattggcttagaagtgagtcttttccaatcaatattgaggaagatttagagtatcttgaacaacttgaacttgattttgcttttagtgggactgaatctagtataattgatatatagttgcagcttgtaagttcaactatcaactagtgatgtgcggtaatgagtccatcaatgttttgttattttcttggttgctatctgctagaacttggaagctattgcaatggaggttgcaagttgcaatgatgttttgttggtttttaaaatctatttgttgctggaagttgcaatgagctagataatgatgactttagtttgtaactaactctattttagtgatggacacaagtttgttgaacaaacttcaacaaaagttgtgatgttgtcttgagtcttgaaaaaaaaaaggaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="97960" stop="99520"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98260" g_stop="98747" g_length="488"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="487" r_length="487" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98748" i_stop="98798" i_length="51">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.543" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98799" g_stop="98888" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="488" r_stop="577" r_length="90" r_score="0.989"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98889" i_stop="98985" i_length="97">
            <donor d_prob="0.986" d_score="0.98"/>
            <acceptor a_prob="0.914" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98986" g_stop="99220" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="578" r_stop="812" r_length="235" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-U330684" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>813</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U330684" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98260" e_stop="98747"/>
          <exon e_start="98799" e_stop="98888"/>
          <exon e_start="98986" e_stop="99220"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAAATCCCCAAAAAGCTCTTTACATGTACCATCTTCATCCACTTCATCTGGCAATTCATCAAGTATATCTAGTGTGAGTGGTTGTGGCAACTTTGTAAATAGAGGAAGATTGAGAACGAAACAACAATTTGAGAAGCATAAAGAAGTTAGTGGAAGTTCAAGTAATAAATCAGAATTGGAAAGATATCTTGCGGAAGATATTGAGCTAGATAGTGATGACTTTGATATATTAATGTGGTGGAAAGTTAAATGAGCCGAGATTTCCTATTCTCGCGGAGATGGTTCGTGATGTGTTAGCACTTCCCATTTCAAGTGTCGCATCGGAATGTGCATTCAGCACAGGAGGTTGTGTTCTTGATCCCTTTAGGAGTTCATTAACTCCTAAAATTGTGCAATCTCTTATTTGTGTTCAAGATTGGCTTAGAAGTGAGTCTTTTCCAATCAATATTGAGGAAGATTTAGAGTATCTTGAACAACTTGAACTTGGTAAGAATTTGATATTTGTATTAACTAAATTGAAATTTCATATTTTTTTAGATTTTGCTTTTAGTGGGACTGAATCTAGTATAATTGATATATAGTTGCAGCTTGTAAGTTCAACTATCAACTAGTGATGTGCGGTAACGAGTAAGTAAAGAACTTATTTACATAAATTGCTTGATAGTTTTATATATTCAATTATGAAATGTAGATCATTTGTCTGAACAGTTCTGTTTTCTCGCAGGTCCATCAATGTTTTGTTATTTTCTTGGTTGCTATCGGCTAGAACTTGGAAGCTATTGCAATGGAGGTTGCAAGTTGCAATGATGTTTTGTTGGTTTTCTAAATCTCTTTGTTGCTGGAAGTTGCAATGAGCCAGATAATGATGACTTTAGTTTGTAACTAACTCTATTTTAGTGATGGACACAAGTTTGTTGAACTTTCTTCTAGTGTTGTTGTGATGTTGTCTTGAGTCTTGA</genome_strand>
        <mrna_strand>AAGAAATCCCCAAAAAGCTCTTTACATGTACCATCTTCACCCACTTCATCTGGCAATTCATCAAGTATATCTAGTGTGAGTGGTTGTGGCAACTTTGTAAATAGAGGAAGATTGAGAACGAAACAACAATTTGAGAAGCATAAAGAAGTTAGTTGAAGTTCAAGTAATAAATCAGAATTGGAAAGATATCTTGCGGAAGATATTGAGCTAGATAGTGATGACTTTGATATATTAATGTGGTGGAAAGTT-AATGAGCCGAGATTTCCTATTCTCGCGGAGATGGTTCGTGATGTGTTAGCCATTCCTATTTCAAGTGTCGCATCGGAATGTGCATTCAGCACAGGAGGTCGTGTTCTTGATCCCTTTAGGAGTTCATTAACTCCTAAAATTGTGCAATCTCTTATTTGTGTTCAAGATTGGCTTAGAAGTGAGTCTTTTCCAATCAATATTGAGGAAGATTTAGAGTATCTTGAACAACTTGAACTTG...................................................ATTTTGCTTTTAGTGGGACTGAATCTAGTATAATTGATATATAGTTGCAGCTTGTAAGTTCAACTATCAACTAGTGATGTGCGGTAATGA.................................................................................................GTCCATCAATGTTTTGTTATTTTCTTGGTTGCTATCTGCTAGAACTTGGAAGCTATTGCAATGGAGGTTGCAAGTTGCAATGATGTTTTGTTGGTTTTTAAAATCTATTTGTTGCTGGAAGTTGCAATGAGCTAGATAATGATGACTTTAGTTTGTAACTAACTCTATTTTAGTGATGGACACAAGTTTGTTGAACAAACTTCAACAAAAGTTGTGATGTTGTCTTGAGTCTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U338284" ref_strand="+" ref_description="SGN-U338284        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: RNase(evalue: 2e-76, score=161)">
      <seq>cgttttgagacgggtgccacctcacgaacttaacgctatgagttcaccttggccatttgtagcttggggaatggatgtcatcagttctatagagtctaccgcttctaatggacatagattcattttggttgccattgattatttcaccaagtgggtggaagcaaccccttacaagtcggtaaccaagaaagtggtggtcgattttgttcgcaacaatctgatatgcagatttggagttccagaatccatcattactgataacggggcaaatctcaacagtcatttgatgaaacagatatatgaacaatttaagttattcatcgaaagtcaactgcttatcgcccccaaatgaacagagctgtagaagccgccaacaaaaatatcaagaagattttgaggaaaatgattgacaaacagcggggttggcatgaaatgttgccatatgcttttctaggttatcgaacgacggtcagaacatcgacttgggctactccatacttgctagtatatggaacagaggcagtcgtgcctgttgaagtcgagataccgtcattgcggatcatccaagaagctgaattaagtaacgccgaatggcttagcaaacagattgatcaactagccttaattgataagaagagaatagttgcgtttgccatggcaagttgtacagacagagaatgactcgcgcttttcacaaaagagtaagagccaggaattttgaagttggtcagttggttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="102157" stop="100817"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101857" g_stop="101117" g_length="741"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="739" r_length="739" r_score="0.910"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-U338284" ref_strand="+">
        <total_alignment_score>0.910</total_alignment_score>
        <cumulative_length_of_scored_exons>741</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U338284" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101857" e_stop="101117"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGATTTGATACAGGTACCACCTCACAAACTTAACGCCATGAGTTCACCTTGGCCCTTTGTAGCTTGGGGAATGGATGTCATCGGTCCTATAGAGCCAGCCGCTTCTAATGGGCACAGATTCATTCTAGTCGCCATTGATTATTTCACCAAATGGGTGGAGGCGGCTTCTTACAAGTCGGTAACCAAGAAAGTGGTGGCCGATTTTGTCCGCAACAATCTGATATGCAGATTTAGAGTTCCTGAATCCATCATTACTGATAACGACGCAAATCTCAACAGTCATTTGATGAAAGAGATATGTGAACAATTTAAGATTATTCATCGAAAGTCAACTGCCTATCGCCCCCAAATGAACGGAGTTGTAGAGGCCGCCAACAAGAATATCAAAAAGATTTTGAGGAAAATGATTGACAAACAGCGAGGTTGGCATGAAATGTTACCATATGCTTTACTAGGTTATCGAACGACGGTCAGAACATCGAC-TGGGCTACTCCATACTTGCTAGTATATGGAACAGAGACAGTCTTACCTGTTGAGGTCGAGATACCATAGTTGAGGATCATCCAAGAAGCTGAATTAAGTAACGCCGAATGGGTTAATAAATGGATTGATCAACTGGCTTTGATTGATGAGAAGAGAATGGTCGCCGTTTGCCATGGCCCAGTTGTATAGACAGAGAATGACTCGCGCTTTTCACAAAAGAGTAAGAGCCAGAAATTTTGAAGTTGGTCAGTTGGTTCT</genome_strand>
        <mrna_strand>CGTTTTGAGACGGGTGCCACCTCACGAACTTAACGCTATGAGTTCACCTTGGCCATTTGTAGCTTGGGGAATGGATGTCATCAGTTCTATAGAGTCTACCGCTTCTAATGGACATAGATTCATTTTGGTTGCCATTGATTATTTCACCAAGTGGGTGGAAGCAACCCCTTACAAGTCGGTAACCAAGAAAGTGGTGGTCGATTTTGTTCGCAACAATCTGATATGCAGATTTGGAGTTCCAGAATCCATCATTACTGATAACGGGGCAAATCTCAACAGTCATTTGATGAAACAGATATATGAACAATTTAAG-TTATTCATCGAAAGTCAACTGCTTATCGCCCCCAAATGAACAGAGCTGTAGAAGCCGCCAACAAAAATATCAAGAAGATTTTGAGGAAAATGATTGACAAACAGCGGGGTTGGCATGAAATGTTGCCATATGCTTTTCTAGGTTATCGAACGACGGTCAGAACATCGACTTGGGCTACTCCATACTTGCTAGTATATGGAACAGAGGCAGTCGTGCCTGTTGAAGTCGAGATACCGTCATTGCGGATCATCCAAGAAGCTGAATTAAGTAACGCCGAATGGCTTAGCAAACAGATTGATCAACTAGCCTTAATTGATAAGAAGAGAATAGTTG-CGTTTGCCATGG-CAAGTTGTACAGACAGAGAATGACTCGCGCTTTTCACAAAAGAGTAAGAGCCAGGAATTTTGAAGTTGGTCAGTTGGTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U335079" ref_strand="+" ref_description="SGN-U335079        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>actgaatagatatcatcgcccaactcaaaatagaaatcaatatatatcaagnattatcataaaatcaactatgatactcaacatgtagcaacaacaagcactatatcattaacaattaccgtcacgttcacacatgaggactcaagcctcaataccatactcatttgggaatcatgttcattagatttagtatattaacatctttcaagattcattatctttatttctcttgtgacggaacatgacattccgctccctcatattcattaatcctcttgtgtgaacacatgacactccgatcccctaaatctacatgacagtttcatgaacgctatcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="119988" stop="113214"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113850" g_stop="113514" g_length="337"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="337" r_length="337" r_score="0.911"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-U335079" ref_strand="+">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>337</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335079" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="113850" e_stop="113514"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTGAGTAGATATAATCGGCCAACTCAAAATAGAAAACAATATATACCAAGTAATATCATAAAATCAACTATGATACTCAACATGTAGCAACAACAAGTACTATATCATTAACAATTACCGTCAAGTTCACACATGAGGACTCAAGCCTCAATACCATACTCATTTGGGAATCATGTTCATTAGATTGAGTATATTAATATCTTTCAAGATTCATTATCTTTATTTCTCTTGTGTCGGTACGTGACACTCCGCTCCCTCATATCCATTAATCCTCTTGTGTCGGTACGTGACACTCCGATCCCCTAAATCTACGTGTC-GGTTCGTGACACCCGATCC</genome_strand>
        <mrna_strand>ACTGAATAGATATCATCGCCCAACTCAAAATAGAAATCAATATATATCAAGNATTATCATAAAATCAACTATGATACTCAACATGTAGCAACAACAAGCACTATATCATTAACAATTACCGTCACGTTCACACATGAGGACTCAAGCCTCAATACCATACTCATTTGGGAATCATGTTCATTAGATTTAGTATATTAACATCTTTCAAGATTCATTATCTTTATTTCTCTTGTGACGGAACATGACATTCCGCTCCCTCATATTCATTAATCCTCTTGTGTGAACACATGACACTCCGATCCCCTAAATCTACATGACAGTTTCATGA-ACGCTATCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U335939" ref_strand="+" ref_description="SGN-U335939        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|49533772|gb|AAT66771.1| putative polyprotein [Solanum demissum] (evalue: 3e-47, score=191)">
      <seq>gaacacatccaaaaattctcaaactaccaaaactaattcaattgagggtacttggatagtgtcatccttgagatgtgccaagaaggatagacaacccttactaaccatcttctgagcacaaagaaaggagataatacgcaccggattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaacgtcaccgttttagcattacaatccaagatcgcaaaattgggagaaagccaagtcatacccagaattacatcaaagtcacccatttctaaagtaaccaaatctagataagtgttgctccccacgaaattcaccaaacaagacctatgtaccttttcaactatcacagactcacccaccggagtagaaacacgaataggcatgtcaagtaattcacaatgcaattttagaccattagcaaatgatgaagatacatatgaaaacgtggagccagggtcaaataatacagatgccatgcaatcacaaaccaagagattacctgtgataacagcatcagacgcctctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="115627" stop="114485"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115327" g_stop="114785" g_length="543"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="543" r_length="543" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-U335939" ref_strand="+">
        <total_alignment_score>0.904</total_alignment_score>
        <cumulative_length_of_scored_exons>543</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335939" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115327" e_stop="114785"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACACATCCAGAAACTCGCGGACCACCGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACGCACCGGATTGGAAGTGTAGTCACCCTTCCACACTAACGGAACTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACGAAGTTCACCAAACAGGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGAATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGC</genome_strand>
        <mrna_strand>GAACACATCCAAAAATTCTCAAACTACCAAAACTAATTCAATTGAGGGTACTTGGATAGTGTCATCCTTGAGATGTGCCAAGAAGGATAGACAACCCTTACTAACCATCTTCTGAGCACAAAGAAAGGAGATAATACGCACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAAATTGGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAGTCACCCATTTCTAAAGTAACCAAATCTAGATAAGTGTTGCTCCCCACGAAATTCACCAAACAAGACCTATGTACCTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGTAATTCACAATGCAATTTTAGACCATTAGCAAATGATGAAGATACATATGAAAACGTGGAGCCAGGGTCAAATAATACAGATGCCATGCAATCACAAACCAAGAGATTACCTGTGATAACAGCATCAGACGCCTCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U317065" ref_strand="+" ref_description="SGN-U317065        Tomato 200607 #1 [3 ESTs aligned] genbank/nr: gi|49533772|gb|AAT66771.1| putative polyprotein [Solanum demissum] (evalue: 3e-84, score=314)">
      <seq>cggaaactcccatccttcttcttcacaaacaaaatcggagcaccccaaggagatgcacttggtctaatgaaacctttgctcaacaactcttgaagttgggcctttaactctcttaactctacgggagccattctataagggggtatagaaatggggcgtgtgcccggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcagggaacacatccaaaaactcacagactataaaaaccgactcaatcgaaggtacttgggtagtgtcatccttgagatgtgccaagaaagctaaacaccctttactaaccattttcttagcacgaagaaaggagatgatgcacaccggattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaatgtcaccgttttagcattacaatccaagatcgcaaattgcggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaaatctacataagtgttgctccccacaaagttcaccaaacaagacctatataccttttcaactaccacagactcacccaccggagtagaaacacgaataggcatatcaagtaattcacaatgtaaatttagaccgttagcaaatgaggaagatacantagaaaacgtggatcccaggatcaacaatacagaagccatgcaatcacaatcgaaagattacctgtgatgacagcatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="115854" stop="114497"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115554" g_stop="114797" g_length="758"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="757" r_length="757" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-U317065" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>758</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U317065" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115554" e_stop="114797"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAACTCCCATCCTTCTTCTTTACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATAAAGCCTTTGTTTAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCTGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCCGGTTCAAGATCAATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCGCGGACCACCGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACGCACCGGATTGGAAGTGTAGTCACCCTTCCACACTAACGGAACTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACGAAGTTCACCAAACAGGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGAATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGAT-CCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATC</genome_strand>
        <mrna_strand>CGGAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAACCTTTGCTCAACAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCTACGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCCGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAAAAACTCACAGACTATAAAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATGCACACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAATGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCGTTAGCAAATGAGGAAGATACANTAGAAAACGTGGATCCCAGGATC-AACAATACAGAAGCCATGCAATCACAATCGA-AAGATTACCTGTGATGACAGCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U335937" ref_strand="+" ref_description="SGN-U335937        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: beta-galactosidase(evalue: 3e-30, score=135)">
      <seq>gatctgtcccaggcttggctaacgtcacagttttagcattacaatccaagattgcaaaatttggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaagtctacataagtattgctccccacaaaagtcaccagaccagacctatatactttttcaactatcacagactcacccaccggagtagaaacacgaataggcatgtcaagcaattcataatttaatttaagaccagtagcaaatgaggaagatacatatgaaaatgtggatccagggtcaaataatacaaaagccatgcaatcacaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="115451" stop="114525"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115151" g_stop="114821" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="331" r_length="331" r_score="0.903"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-U335937" ref_strand="+">
        <total_alignment_score>0.903</total_alignment_score>
        <cumulative_length_of_scored_exons>331</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335937" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115151" e_stop="114821"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACGAAGTTCACCAAACAGGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGAATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAG</genome_strand>
        <mrna_strand>GATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAGTCTACATAAGTATTGCTCCCCACAAAAGTCACCAGACCAGACCTATATACTTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAATTCATAATTTAATTTAAGACCAGTAGCAAATGAGGAAGATACATATGAAAATGTGGATCCAGGGTCAAATAATACAAAAGCCATGCAATCACAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U335935" ref_strand="+" ref_description="SGN-U335935        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|49533772|gb|AAT66771.1| putative polyprotein [Solanum demissum] (evalue: 2e-78, score=295)">
      <seq>tcaatgcgaggaagaggatacttgttcttaatagttaccttgttcagttgtctgtagtctatgcacattctaaaacttccatccttcttcttcacaaataaaactggagcaccccaaggagatgcacttggtctaatgaagaccttgctcaacaactcttgaagttgagcctttaactctcttaattcggcgggagccattctataagggggtatagaaatggggcgtgtgcctggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcaggaaacacgtccaaaaactcgcggactaccgaaaccgactcaattgagggtacttgagtagtgtcatccttgagatgtgccaagaaagctgaacaccctttactaaccattttcttagcacgaagaaaggatatgatacgcaccagattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaacgtcaccgttttagcattacaatccaagatcgcaaaatttggagaaagccaagtcatacccagaattacatcaatgtcacccatttctaaaaaaccaaatctacataagtgttgctccccacgaaattcnacaaaacagaactatgtaccttttcaactaccac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="115923" stop="114665"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115623" g_stop="114965" g_length="659"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="658" r_length="658" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-U335935" ref_strand="+">
        <total_alignment_score>0.917</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335935" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115623" e_stop="114965"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATGCGAGGAAGAGGGTACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTTACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATAAAGCCTTTGTTTAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCTGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCCGGTTCAAGATCAATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCGCGGACCACCGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACGCACCGGATTGGAAGTGTAGTCACCCTTCCACACTAACGGAACTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACGAAGTTCACCAAACAGGACCTATATACCTTTTCAACTACCAC</genome_strand>
        <mrna_strand>TCAATGCGAGGAAGAGGATACTTGTTCTTAATAGTTACCTTGTTCAGTTGTCTGTAGTCTATGCACATTCTAAAACTTCCATCCTTCTTCTTCACAAATAAAACTGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGACCTTGCTCAACAACTCTTGAAGTTGAGCCTTTAACTCTCTTAATTCGGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCTGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGAAACACGTCCAAAAACTCGCGGACTACCGAAACCGACTCAATTGAGGGTACTTGAGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTGAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGATATGATACGCACCAGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAATGTCACCCATTTCTAA-AAAACCAAATCTACATAAGTGTTGCTCCCCACGAAATTCNACAAAACAGAACTATGTACCTTTTCAACTACCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U326740" ref_strand="+" ref_description="SGN-U326740        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: ATMG00860.1 | Symbol: ORF158 | hypothetical protein | chrM:235916-236392 FORWARD | Aliases: ORF158 (evalue: 2e-15, score=79.3) genbank/nr: RNA-directed(evalue: 2e-101, score=370)">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatgcgaggaagaggatacttgttctttatggttaccttgttcaactgccggtagcctatgcacatccgaaaactccaatccttcttctttacaaacaaaaccggagcaccccaaggagatgcagttggtctaatgaagcctttgctcacaactctttgaagtggtcttttaactctcttaactctgcgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="116443" stop="115131"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116143" g_stop="115431" g_length="713"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="712" r_length="712" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-U326740" ref_strand="+">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U326740" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116143" e_stop="115431"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACGAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCATGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAAAATTTCCAATACCATTCTCAAATGCTCCTCATGTTCTTTCTTGCTCTTTGAGTATATCAGTATATCATCAATAAATACGATCACGAAGAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGATCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTCGTTTGAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACTGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGGTACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTTACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATAAAGCCTTTGTTTAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCTGCGG</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGCCTATGCACATCCGAAAACTCCAATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCAGTTGGTCTAATGAAGCCTTTG-CTCACAACTCTTTGAAGTGGTCTTTTAACTCTCTTAACTCTGCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U345909" ref_strand="+" ref_description="SGN-U345909        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: beta-galactosidase(evalue: 1e-29, score=133)">
      <seq>ctacatctcctaccatacaatgcttcaaatggagccatatcaatgcttgattgatagctattattgtatgaaaactccgctaagggtaggaagctatcccaatgaccaccaaactctatcacacacgcacgaagcatattctccaacacttgaatcgttcgctcagactgaccatcgggagaactagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="117924" stop="117147"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="117624" g_stop="117448" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-U345909" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>177</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U345909" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="117624" e_stop="117448"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACATCTCCTACCATACAATGCTTCAAATGGAGCCATATCAATGCTTGAGTGATAGCTATTATTGTATGAAAATTCCGCTAAGGGTAAGAAGCTATCGCAATGGCCACCAAACTCTATCACACATGCGCGAAGCATATCCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</genome_strand>
        <mrna_strand>CTACATCTCCTACCATACAATGCTTCAAATGGAGCCATATCAATGCTTGATTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAGGAAGCTATCCCAATGACCACCAAACTCTATCACACACGCACGAAGCATATTCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U343095" ref_strand="-" ref_description="SGN-U343095        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | zinc finger protein-related, contains Pfam profiles PF03108: MuDR family transposase, PF04434: SWIM zinc finger | chr1:23851419-23853578 FORWARD | Aliases: F22C12.28, F22C12_28(evalue: 5e-07, score=52) genbank/nr: putative(evalue: 3e-41, score=171)">
      <seq>cttgagcggaaagtatgttcttgtggtagatttcaactagatgagataccttgttcacatgcaatcgctgtattgaaaaaaaagaatgtcaccgatatgaatccgtattgctctgattattacaagcctgatgcattggcaaaaacatatgaaatttcaatggtaccaatgccagataaggaagattggtcagatcctaataatgtggtagctgaaactgtgtatccacctagatacagaagatcatctggacgaccaagaaaaagaagaagaaagaatgcagatgaaaagatttcggtgaacacaaactgttgtggacaatgtggacaagaaggaaacaacggaagaacttgtactttctacccaaaagagaagtgaattagtcgtaatgtttttatgatatcaagaataatttataacgtaaatattttaatgaatttcagttttcattacagttgaaaattgaacactttttgtttagataaataaacttaataacatgtgataattaaattgaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="+" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="133070" stop="134188"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="133370" g_stop="133888" g_length="519"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="518" r_length="518" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="519" polyA_stop="529"/>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="+" ref_id="SGN-U343095" ref_strand="-">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U343095" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="133370" e_stop="133888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGAGCGGAAAGTATGTTGTTGTGGTAGATTTCAACTAGATGAGATACCTTGTTCACATGCAATCACTGTATTGAAAAAAAAGAATGTCACCGATATAAATCCGTATTGCTCTGATTATTACAAGCCTGATGCGTTGGCAAAAATATATGAAATTCCAATGGTGCCAATGCCAGATAAGAAAGATTGGTCAGATCCTAAACACGTGGTAGCTGAAACTGTGCATCCACCTAGATACAGAAGATCATCTGGACGACCAAGAAAAAGAAGAAGAAAGAATGCAGATGAAAAGATTTCGGTGAACACAAACTGTTGTGGACAATGTGGACAAGAAGGGCACAACAGAAGAACTTGTACTTTCTACCCAAAAGAGAAGTGAATTAGTCGCAATGTTTCTATGATATCAAGAATAATTTATAACGTAAACATTTTAATGAATTTCAGTTTTCATTACAACTGCAAATTGAACACTTTTTGTTTAGATAAATAAACGTACAAACATGTGGTAATTAAATTTGAA</genome_strand>
        <mrna_strand>CTTGAGCGGAAAGTATGTTCTTGTGGTAGATTTCAACTAGATGAGATACCTTGTTCACATGCAATCGCTGTATTGAAAAAAAAGAATGTCACCGATATGAATCCGTATTGCTCTGATTATTACAAGCCTGATGCATTGGCAAAAACATATGAAATTTCAATGGTACCAATGCCAGATAAGGAAGATTGGTCAGATCCTAATAATGTGGTAGCTGAAACTGTGTATCCACCTAGATACAGAAGATCATCTGGACGACCAAGAAAAAGAAGAAGAAAGAATGCAGATGAAAAGATTTCGGTGAACACAAACTGTTGTGGACAATGTGGACAAGAAGGAAACAACGGAAGAACTTGTACTTTCTACCCAAAAGAGAAGTGAATTAGTCGTAATGTTTTTATGATATCAAGAATAATTTATAACGTAAATATTTTAATGAATTTCAGTTTTCATTACAGTTGAAAATTGAACACTTTTTGTTTAGATAAATAAACTTAATAACATGTGATAATTAAA-TTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-IjgfVt/lycopersicum_combined_unigene_seqs" ref_id="SGN-U342680" ref_strand="+" ref_description="SGN-U342680        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: hypothetical(evalue: 7e-19, score=97.4)">
      <seq>tcgtgccgattttgataaaagcaaatcactcccagctgatgcaatctattagcaaagagaacatcaattttcaggctgatacaagcacatttcagtctgacaaacaaacatctcagcaaataccggttgatctcgatgatatgggtggtgtagctgaggatggtggtggtttttctggtaaaaatggtgagcatcatatcgtcgacgatgcaggggatgtcgatgtggatggtgttggtgttgccgtaaatgagggtgaaccaatagtcactgatccaaaggatggtgacgcacatcagtcgcaccaagatttaaatgaacatatcatggaccaagccgttgacgacaatgttcatcacaacatccctcatatgttgcccgaaaaaacaacaacagattcatcggattcttcaacttcaacaacaatatcgccatcaactcaagcagcaatagaagcacttatcaaagatttgggtaaagatgctaccaatgctagaccattatattcttacgatccaaagaatataactagcagccagtacttgttgaccgacagtcaattacccactgaaattccaataacggagattgctgttaaaactgatgcagtcactcctgcgcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0284C08-RSYMc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0284C08.1" temp_strand="-" temp_description="C07HBa0284C08.1  AC212641.1 htgs_phase:1 submitted_to_sgn_as:gi|158262135|gb|AC212641.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0284C08, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces">
        <position start="137592" stop="136092"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="137300" g_stop="137018" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="281" r_length="281" r_score="0.908"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="137017" i_stop="136817" i_length="201">
            <donor d_prob="0.963" d_score="0.84"/>
            <acceptor a_prob="0.971" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="136816" g_stop="136694" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="403" r_length="122" r_score="0.951"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="136693" i_stop="136613" i_length="81">
            <donor d_prob="0.991" d_score="0.92"/>
            <acceptor a_prob="0.908" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="136612" g_stop="136392" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="404" r_stop="623" r_length="220" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0284C08.1" gen_strand="-" ref_id="SGN-U342680" ref_strand="+">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>627</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0284C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U342680" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="137300" e_stop="137018"/>
          <exon e_start="136816" e_stop="136694"/>
          <exon e_start="136612" e_stop="136392"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTGATTATTTTGATAAAAGCAAATCAC-ACCAGCTGATGCGATCCATTAGAAAAGAGAACATCAATTTCCAGGCTGATACAAGCACATTTCAGTCTAACAAACAAACATCTCAGCAAATACCAGTTGATCTCGATGATATGGGTGGTGTAGCTGAGGATGGTGGTGGTTTTTCTGGTAAAAATGGTGAGCATCATATCGTCGACAATGCAAGGGATGTCGATATGGATGGTGTTGGTGTTTCCGTAAATGAGGGTGAATAAATAGTCAGTGATAATCTAAAGGTAATGTTTATGATACATTGGGTATGTTGTGTATCATGCTTATATAGTCAATGCTTTGTATCATGATCATTTTTTTATCATTTTATATTCTGTCATGTATCATGCATATTTACTCAATACTATGTGTCATGTGATTGTAATCAATGTTACGTATCAGCACAAATTATATTAACAGTTTTTATTTCAAAACTGCATATTCAGGATGGTGACGCACATCAGTCGCACCAAGAATTAAATGAACATATCATGGACCAAGCCGTTGATGACAATGTTCATCACAACATCTCTCATGTGTTGCCCGAAAAAACAACAACGGATTCATCGGTACATTTTTCAATTTTGATTTATGACACACAATTTCATTACACACAAATTTATTCTAAAAATCATTAAATCATATTATAGAGGATTCTTCAACTTCAACAACAATATCGCCATCAACTCAAGCGGCAATAGATGCGCTTATCAAAGATTTGGGTAAAGATGCTACTAATGCTAGACCATTATATTCTTACGATTCACAGAATATAACTAGCAGCCAGTACTTGTTGATCGACCGTCAATTACCCACTGATATTCCAATAACGGAGATTGCTGTTAAATCTGATGCAGTCACTCCTGCGCAT</genome_strand>
        <mrna_strand>TCGTGCCGATTTTGATAAAAGCAAATCACTCCCAGCTGATGCAATCTATTAGCAAAGAGAACATCAATTTTCAGGCTGATACAAGCACATTTCAGTCTGACAAACAAACATCTCAGCAAATACCGGTTGATCTCGATGATATGGGTGGTGTAGCTGAGGATGGTGGTGGTTTTTCTGGTAAAAATGGTGAGCATCATATCGTCGACGATGCAGGGGATGTCGATGTGGATGGTGTTGGTGTTGCCGTAAATGAGGGTGAACCAATAGTCACTG---ATCCAAAG.........................................................................................................................................................................................................GATGGTGACGCACATCAGTCGCACCAAGATTTAAATGAACATATCATGGACCAAGCCGTTGACGACAATGTTCATCACAACATCCCTCATATGTTGCCCGAAAAAACAACAACAGATTCATC-.................................................................................-GGATTCTTCAACTTCAACAACAATATCGCCATCAACTCAAGCAGCAATAGAAGCACTTATCAAAGATTTGGGTAAAGATGCTACCAATGCTAGACCATTATATTCTTACGATCCAAAGAATATAACTAGCAGCCAGTACTTGTTGACCGACAGTCAATTACCCACTGAAATTCCAATAACGGAGATTGCTGTTAAAACTGATGCAGTCACTCCTGCGCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>34</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="27208" PGL_stop="9483"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="19884" e_stop="19666"/>
            <exon e_start="18075" e_stop="17848"/>
            <exon e_start="16987" e_stop="16841"/>
            <exon e_start="16408" e_stop="16250"/>
            <exon e_start="15957" e_stop="15762"/>
            <exon e_start="15318" e_stop="15050"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.058" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.870" e_score="1.000"/>
          <exon-intron don_prob="0.898" acc_prob="0.862" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.986" e_score="0.987"/>
          <exon-intron don_prob="0.999" acc_prob="0.904" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="19884" e_stop="19666" e_length="219"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.058">
            <gDNA_intron_boundary i_start="19665" i_stop="18076" i_length="1590"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="18075" e_stop="17848" e_length="228"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.870">
            <gDNA_intron_boundary i_start="17847" i_stop="16988" i_length="860"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="16987" e_stop="16841" e_length="147"/>
          </exon>
          <intron i_serial="3" don_prob="0.898" acc_prob="0.862">
            <gDNA_intron_boundary i_start="16840" i_stop="16409" i_length="432"/>
          </intron>
          <exon e_serial="4" e_score="0.987">
            <gDNA_exon_boundary e_start="16408" e_stop="16250" e_length="159"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.986">
            <gDNA_intron_boundary i_start="16249" i_stop="15958" i_length="292"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="15957" e_stop="15762" e_length="196"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.904">
            <gDNA_intron_boundary i_start="15761" i_stop="15319" i_length="443"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="15318" e_stop="15050" e_length="269"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19884" stop="19666"/>
              <exon start="18075" stop="17848"/>
              <exon start="16987" stop="16841"/>
              <exon start="16408" stop="16250"/>
              <exon start="15957" stop="15948"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U324360" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16259" stop="16250"/>
              <exon start="15957" stop="15762"/>
              <exon start="15318" stop="15050"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U346224" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTCCTCTCTGTTTCTCCATTGGCTCTTCCTTCTTCTCCAGCTATCTTCTTCACCTTCAAACTTAGTATTCTGAGTTAATTTTTTCTTCTAAACTTCAATTTTGCATCATTATTGCATAAAATTTTCGAAACTGAATTCAATTTTTTTGTTATTTGCTAAAGAAATTATCGTTTCTGATCAAATAGGAGGATTCGGAGGTTAGATTTCAGGCGTTTTCAG : CTATTTCAGATTCTAAACTGAAGTGAACAGAACATCCATTATGCTGGAATGACTTCAAGTACATAAGATCCTATGCATTGAGGATGAAGGGAGGTTTAAAGGTTCCACTGATCTCTCTCATCCTTATTGGATTTGTCTGCGCCAGTATTATTATTTTGGCATACGTGAAAAGCCCTTTTCTCTCTTATTGGACATCATCTCAAGACCGTGTCTTCCAGATTTCTCCAG : ATTATAAAGTGAAAGATGAAGAAGTTTTAAAAGAAAGAAATAGATCAGGGCAATCAGAAGAAAATGTGAACTTTGAATCTGCCATTTCACACTCTTCAATGAAGGATAAGGTGACTGAAGAACCAATTACTAATACTGAGATCGAAG : GAAGTGTAGGTATTCCTCTCAACTTTACCCAAAAAGGAGGAGATTTAAAAGCCTTGGGAGAAAAAAATAGTTCAAGAGAACAGGAAAATGAAGTCGCTGCTCCACTGGATTCTGCAGGCGTCGCTATAGAAAATATGACATCTGATTCAAAAGATCATG : GTTGTAATTATGCTAAAGGTAGATGGGTCACAGATGATAGTCGGCCTTTATATTCTGGATTTCGCTGCAAGCGGTGGTTGTCAGCCATGTGGGCTTGCCGCTTGACACAGCGTACGGATTTTGAATACGAGAAACTACGTTGGAGACCAAGGGATTGCGAGATCGAAGAGTTTACAGGTGTTAAATTCCTGAAAAG : GATGGAGAACAAAACTCTGGCCTTCATTGGGGATTCCCTTGGCAGACAACAATTCCAGTCGCTTATGTGTATGATTACTGGTGGTGAAGACAGACCTGATGTTCTTGACGTGGGACGTGAATATGGTCTTGTAAAGGCTCGTCATGCTGTACGACCTGATGGATGGGCTTATCGATTTCCAAGGACCCAAACAACTATTCTTTACTATTGGTCTGCTAGTTTGTGTAACTTGACACCCATTAATGCCTCTAACCCTCTTACTGATTATG</gDNA_template>
            <first_frame> L  L  S  V  S  P  L  A  L  P  S  S  P  A  I  F  F  T  F  K  L  S  I  L  S  *  F  F  L  L  N  F  N  F  A  S  L  L  H  K  I  F  E  T  E  F  N  F  F  V  I  C  *  R  N  Y  R  F  *  S  N  R  R  I  R  R  L  D  F  R  R  F  Q  :  L  F  Q  I  L  N  *  S  E  Q  N  I  H  Y  A  G  M  T  S  S  T  *  D  P  M  H  *  G  *  R  E  V  *  R  F  H  *  S  L  S  S  L  L  D  L  S  A  P  V  L  L  F  W  H  T  *  K  A  L  F  S  L  I  G  H  H  L  K  T  V  S  S  R  F  L  Q  :  I  I  K  *  K  M  K  K  F  *  K  K  E  I  D  Q  G  N  Q  K  K  M  *  T  L  N  L  P  F  H  T  L  Q  *  R  I  R  *  L  K  N  Q  L  L  I  L  R  S  K  :  E  V  *  V  F  L  S  T  L  P  K  K  E  E  I  *  K  P  W  E  K  K  I  V  Q  E  N  R  K  M  K  S  L  L  H  W  I  L  Q  A  S  L  *  K  I  *  H  L  I  Q  K  I  M  :  V  V  I  M  L  K  V  D  G  S  Q  M  I  V  G  L  Y  I  L  D  F  A  A  S  G  G  C  Q  P  C  G  L  A  A  *  H  S  V  R  I  L  N  T  R  N  Y  V  G  D  Q  G  I  A  R  S  K  S  L  Q  V  L  N  S  *  K   : G  W  R  T  K  L  W  P  S  L  G  I  P  L  A  D  N  N  S  S  R  L  C  V  *  L  L  V  V  K  T  D  L  M  F  L  T  W  D  V  N  M  V  L  *  R  L  V  M  L  Y  D  L  M  D  G  L  I  D  F  Q  G  P  K  Q  L  F  F  T  I  G  L  L  V  C  V  T  *  H  P  L  M  P  L  T  L  L  L  I  M </first_frame>
            <second_frame>  S  S  L  F  L  H  W  L  F  L  L  L  Q  L  S  S  S  P  S  N  L  V  F  *  V  N  F  F  F  *  T  S  I  L  H  H  Y  C  I  K  F  S  K  L  N  S  I  F  L  L  F  A  K  E  I  I  V  S  D  Q  I  G  G  F  G  G  *  I  S  G  V  F  S :   Y  F  R  F  *  T  E  V  N  R  T  S  I  M  L  E  *  L  Q  V  H  K  I  L  C  I  E  D  E  G  R  F  K  G  S  T  D  L  S  H  P  Y  W  I  C  L  R  Q  Y  Y  Y  F  G  I  R  E  K  P  F  S  L  L  L  D  I  I  S  R  P  C  L  P  D  F  S  R :   L  *  S  E  R  *  R  S  F  K  R  K  K  *  I  R  A  I  R  R  K  C  E  L  *  I  C  H  F  T  L  F  N  E  G  *  G  D  *  R  T  N  Y  *  Y  *  D  R  R :   K  C  R  Y  S  S  Q  L  Y  P  K  R  R  R  F  K  S  L  G  R  K  K  *  F  K  R  T  G  K  *  S  R  C  S  T  G  F  C  R  R  R  Y  R  K  Y  D  I  *  F  K  R  S  W :   L  *  L  C  *  R  *  M  G  H  R  *  *  S  A  F  I  F  W  I  S  L  Q  A  V  V  V  S  H  V  G  L  P  L  D  T  A  Y  G  F  *  I  R  E  T  T  L  E  T  K  G  L  R  D  R  R  V  Y  R  C  *  I  P  E  K  :  D  G  E  Q  N  S  G  L  H  W  G  F  P  W  Q  T  T  I  P  V  A  Y  V  Y  D  Y  W  W  *  R  Q  T  *  C  S  *  R  G  T  *  I  W  S  C  K  G  S  S  C  C  T  T  *  W  M  G  L  S  I  S  K  D  P  N  N  Y  S  L  L  L  V  C  *  F  V  *  L  D  T  H  *  C  L  *  P  S  Y  *  L   </second_frame>
            <third_frame>   P  L  C  F  S  I  G  S  S  F  F  S  S  Y  L  L  H  L  Q  T  *  Y  S  E  L  I  F  S  S  K  L  Q  F  C  I  I  I  A  *  N  F  R  N  *  I  Q  F  F  C  Y  L  L  K  K  L  S  F  L  I  K  *  E  D  S  E  V  R  F  Q  A  F  S   : A  I  S  D  S  K  L  K  *  T  E  H  P  L  C  W  N  D  F  K  Y  I  R  S  Y  A  L  R  M  K  G  G  L  K  V  P  L  I  S  L  I  L  I  G  F  V  C  A  S  I  I  I  L  A  Y  V  K  S  P  F  L  S  Y  W  T  S  S  Q  D  R  V  F  Q  I  S  P   : D  Y  K  V  K  D  E  E  V  L  K  E  R  N  R  S  G  Q  S  E  E  N  V  N  F  E  S  A  I  S  H  S  S  M  K  D  K  V  T  E  E  P  I  T  N  T  E  I  E   : G  S  V  G  I  P  L  N  F  T  Q  K  G  G  D  L  K  A  L  G  E  K  N  S  S  R  E  Q  E  N  E  V  A  A  P  L  D  S  A  G  V  A  I  E  N  M  T  S  D  S  K  D  H   : G  C  N  Y  A  K  G  R  W  V  T  D  D  S  R  P  L  Y  S  G  F  R  C  K  R  W  L  S  A  M  W  A  C  R  L  T  Q  R  T  D  F  E  Y  E  K  L  R  W  R  P  R  D  C  E  I  E  E  F  T  G  V  K  F  L  K  R :   M  E  N  K  T  L  A  F  I  G  D  S  L  G  R  Q  Q  F  Q  S  L  M  C  M  I  T  G  G  E  D  R  P  D  V  L  D  V  G  R  E  Y  G  L  V  K  A  R  H  A  V  R  P  D  G  W  A  Y  R  F  P  R  T  Q  T  T  I  L  Y  Y  W  S  A  S  L  C  N  L  T  P  I  N  A  S  N  P  L  T  D  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18049" stop="17848"/>
                    <exon start="16987" stop="16841"/>
                    <exon start="16408" stop="16250"/>
                    <exon start="15957" stop="15762"/>
                    <exon start="15318" stop="15051"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>972</number_coding_nucleotides>
                  <number_encoded_amino_acids>324</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TEHPLCWNDFKYIRSYALRMKGGLKVPLISLILIGFVCASIIILAYVKSPFLSYWTSSQDRVFQISPDYKVKDEEVLKERNRSGQSEENVNFESAISHSSMKDKVTEEPITNTEIEGSVGIPLNFTQKGGDLKALGEKNSSREQENEVAAPLDSAGVAIENMTSDSKDHGCNYAKGRWVTDDSRPLYSGFRCKRWLSAMWACRLTQRTDFEYEKLRWRPRDCEIEEFTGVKFLKRMENKTLAFIGDSLGRQQFQSLMCMITGGEDRPDVLDVGREYGLVKARHAVRPDGWAYRFPRTQTTILYYWSASLCNLTPINASNPLTDY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="14576" e_stop="14114"/>
            <exon e_start="10981" e_stop="10934"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.875"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="14576" e_stop="14114" e_length="463"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="14113" i_stop="10982" i_length="3132"/>
          </intron>
          <exon e_serial="2" e_score="0.875">
            <gDNA_exon_boundary e_start="10981" e_stop="10934" e_length="48"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14576" stop="14114"/>
              <exon start="10981" stop="10934"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U332908" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCAACACCTGGAATGCAGGATTGTTTGCATTGGTGCTTGCCTGGTGTTCCAGATACATGGAATGAAGTTCTTTTTGCTCAACTTTAATATTGCAAGACCGGCAAGGAACCAGTGCTTCAACATTGATCTCTTCAACACTAGTGCAACATGAATTGAATTGAATAATGTCTTGGATGATTTTGGCAATTGGAGCTTGACAAGTTGGATTCAGCTTTGATACATGGGGATTGCTGATCAGACAGCAGTTTGCACCATATTTTAGGAGTAGATGAGTTATACATTATTTTTGGAATTTATAGTTTGGTTTGTCCTACCATTTGTTAGAGACTAGATTCTTTGAGGGGTTGGGGTACGGAAGAGGCTTGACCCTTGACATGTACGGTGAGTTTGTAAGACATGAGAGTGTACTTGGAAGAACAACACAAGGGGATTTTTCTAGTGATCAGATGATGCTTAAATCCTA : ATAAAAAGAAAAAAAAAAAAAAAATTTTAAAAAAAAAAAAAAAAAAAA</gDNA_template>
            <first_frame> S  T  P  G  M  Q  D  C  L  H  W  C  L  P  G  V  P  D  T  W  N  E  V  L  F  A  Q  L  *  Y  C  K  T  G  K  E  P  V  L  Q  H  *  S  L  Q  H  *  C  N  M  N  *  I  E  *  C  L  G  *  F  W  Q  L  E  L  D  K  L  D  S  A  L  I  H  G  D  C  *  S  D  S  S  L  H  H  I  L  G  V  D  E  L  Y  I  I  F  G  I  Y  S  L  V  C  P  T  I  C  *  R  L  D  S  L  R  G  W  G  T  E  E  A  *  P  L  T  C  T  V  S  L  *  D  M  R  V  Y  L  E  E  Q  H  K  G  I  F  L  V  I  R  *  C  L  N  P   : N  K  K  K  K  K  K  K  I  L  K  K  K  K  K  K  </first_frame>
            <second_frame>  Q  H  L  E  C  R  I  V  C  I  G  A  C  L  V  F  Q  I  H  G  M  K  F  F  L  L  N  F  N  I  A  R  P  A  R  N  Q  C  F  N  I  D  L  F  N  T  S  A  T  *  I  E  L  N  N  V  L  D  D  F  G  N  W  S  L  T  S  W  I  Q  L  *  Y  M  G  I  A  D  Q  T  A  V  C  T  I  F  *  E  *  M  S  Y  T  L  F  L  E  F  I  V  W  F  V  L  P  F  V  R  D  *  I  L  *  G  V  G  V  R  K  R  L  D  P  *  H  V  R  *  V  C  K  T  *  E  C  T  W  K  N  N  T  R  G  F  F  *  *  S  D  D  A  *  I  L  :  I  K  R  K  K  K  K  K  F  *  K  K  K  K  K  K </second_frame>
            <third_frame>   N  T  W  N  A  G  L  F  A  L  V  L  A  W  C  S  R  Y  M  E  *  S  S  F  C  S  T  L  I  L  Q  D  R  Q  G  T  S  A  S  T  L  I  S  S  T  L  V  Q  H  E  L  N  *  I  M  S  W  M  I  L  A  I  G  A  *  Q  V  G  F  S  F  D  T  W  G  L  L  I  R  Q  Q  F  A  P  Y  F  R  S  R  *  V  I  H  Y  F  W  N  L  *  F  G  L  S  Y  H  L  L  E  T  R  F  F  E  G  L  G  Y  G  R  G  L  T  L  D  M  Y  G  E  F  V  R  H  E  S  V  L  G  R  T  T  Q  G  D  F  S  S  D  Q  M  M  L  K  S  * :   *  K  E  K  K  K  K  N  F  K  K  K  K  K  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0284C08.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="27208" e_stop="27024"/>
            <exon e_start="22609" e_stop="22578"/>
            <exon e_start="19066" e_stop="19037"/>
            <exon e_start="14974" e_stop="14957"/>
            <exon e_start="10413" e_stop="10285"/>
            <exon e_start="10039" e_stop="9483"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.980" e_score="0.973"/>
          <exon-intron don_prob="0.992" acc_prob="0.776" e_score="0.500"/>
          <exon-intron don_prob="0.570" acc_prob="0.988" e_score="0.633"/>
          <exon-intron don_prob="0.556" acc_prob="0.000" e_score="0.667"/>
          <exon-intron don_prob="0.959" acc_prob="0.000" e_score="0.729"/>
          <exon-only e_score="0.939"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.973">
            <gDNA_exon_boundary e_start="27208" e_stop="27024" e_length="185"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.980">
            <gDNA_intron_boundary i_start="27023" i_stop="22610" i_length="4414"/>
          </intron>
          <exon e_serial="2" e_score="0.500">
            <gDNA_exon_boundary e_start="22609" e_stop="22578" e_length="32"/>
          </exon>
          <intron i_serial="2" don_prob="0.992" acc_prob="0.776">
            <gDNA_intron_boundary i_start="22577" i_stop="19067" i_length="3511"/>
          </intron>
          <exon e_serial="3" e_score="0.633">
            <gDNA_exon_boundary e_start="19066" e_stop="19037" e_length="30"/>
          </exon>
          <intron i_serial="3" don_prob="0.570" acc_prob="0.988">
            <gDNA_intron_boundary i_start="19036" i_stop="14975" i_length="4062"/>
          </intron>
          <exon e_serial="4" e_score="0.667">
            <gDNA_exon_boundary e_start="14974" e_stop="14957" e_length="18"/>
          </exon>
          <intron i_serial="4" don_prob="0.556" acc_prob="0.000">
            <gDNA_intron_boundary i_start="14956" i_stop="10414" i_length="4543"/>
          </intron>
          <exon e_serial="5" e_score="0.729">
            <gDNA_exon_boundary e_start="10413" e_stop="10285" e_length="129"/>
          </exon>
          <intron i_serial="5" don_prob="0.959" acc_prob="0.000">
            <gDNA_intron_boundary i_start="10284" i_stop="10040" i_length="245"/>
          </intron>
          <exon e_serial="6" e_score="0.939">
            <gDNA_exon_boundary e_start="10039" e_stop="9483" e_length="557"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27208" stop="27024"/>
              <exon start="22609" stop="22578"/>
              <exon start="19066" stop="19037"/>
              <exon start="14974" stop="14957"/>
              <exon start="10413" stop="10285"/>
              <exon start="10039" stop="9483"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U332110" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAAATTTTCAATAGGTCTTTCCAACTCCAGTTCCAGACCTTTCATCCAAAGGTCCATTAGTGTTGTCAGGCAGATACCGAGGAGTATTCCCTGACACGCTTAAAGCTAAAGGAGTCCTTGCAGACTTGAGTAACTTCTCCCTGGATCTGAAAGCTATACAGACAAAGGACATACCTCTTGATAAG : TAATGAAGTTGACAACGAGGTTGTAGTAAATG : CTGGACACATGTCAGGTTCTCCGAAAATGG : GACACCATTGGAATAGAG : GATTGGCACAAAAAAAGTTACAAAAAAAAGGAGTTTTTTTTTTTGAGAATACCCGGCATGATTATTGATAAGGAATTAGAAAAAGGCAAAAGTTATCAATGAATTAACCCACCAACCCCAAAGGGAAAG : GTTTCCACTGCTCCTACGAAGATTGAAGAGCCTAAAATACAGAAGGAGACATTGCTACAGAATCTGGGGGCTGGTTTTGGTAACTACAGTGCTACAAATGAAAATATTTCTCCTGGAACCACCGAGACAAAACCTGAGACAGCCGAGTTTCTAGCGAAGGCAGCATCTAATTGTTGTGGAAAGACATGTGAAATATGCTGTTGTATGTGCTGTATACGGACATGTTCGAAAATGAATGATCAATGTGCAATCGTGCTGACACAGTTCCTGGGTTCCTTGGCATGCTTAGGTTGCTTCGCTTGCTGTGAATTATGCTGTTCCGTTAATGATGGATGAGAAAGTTATTGCATAGCTTCCTTGCAATCTTGTTGTATACAGTTTCTTACATAGTACAAGGTTTACATTTTGTGTATCATGGTTTCTTGTGAATAGTATGTATTTATATACATACAAGTTTTACCAATTGCTTTACTGTAATGATGTAGAAATATAACATTTGCATGTTTCATAATCAGAGAAGAATAATGTTAAACTAGACATGATTATTTGCCGGACAA</gDNA_template>
            <first_frame> *  I  F  N  R  S  F  Q  L  Q  F  Q  T  F  H  P  K  V  H  *  C  C  Q  A  D  T  E  E  Y  S  L  T  R  L  K  L  K  E  S  L  Q  T  *  V  T  S  P  W  I  *  K  L  Y  R  Q  R  T  Y  L  L  I  S :   N  E  V  D  N  E  V  V  V  N   : A  G  H  M  S  G  S  P  K  M   : G  H  H  W  N  R   : G  L  A  Q  K  K  L  Q  K  K  G  V  F  F  F  E  N  T  R  H  D  Y  *  *  G  I  R  K  R  Q  K  L  S  M  N  *  P  T  N  P  K  G  K   : G  F  H  C  S  Y  E  D  *  R  A  *  N  T  E  G  D  I  A  T  E  S  G  G  W  F  W  *  L  Q  C  Y  K  *  K  Y  F  S  W  N  H  R  D  K  T  *  D  S  R  V  S  S  E  G  S  I  *  L  L  W  K  D  M  *  N  M  L  L  Y  V  L  Y  T  D  M  F  E  N  E  *  S  M  C  N  R  A  D  T  V  P  G  F  L  G  M  L  R  L  L  R  L  L  *  I  M  L  F  R  *  *  W  M  R  K  L  L  H  S  F  L  A  I  L  L  Y  T  V  S  Y  I  V  Q  G  L  H  F  V  Y  H  G  F  L  *  I  V  C  I  Y  I  H  T  S  F  T  N  C  F  T  V  M  M  *  K  Y  N  I  C  M  F  H  N  Q  R  R  I  M  L  N  *  T  *  L  F  A  G  Q </first_frame>
            <second_frame>  K  F  S  I  G  L  S  N  S  S  S  R  P  F  I  Q  R  S  I  S  V  V  R  Q  I  P  R  S  I  P  *  H  A  *  S  *  R  S  P  C  R  L  E  *  L  L  P  G  S  E  S  Y  T  D  K  G  H  T  S  *  *   : V  M  K  L  T  T  R  L  *  *  M  :  L  D  T  C  Q  V  L  R  K  W  :  D  T  I  G  I  E  :  D  W  H  K  K  S  Y  K  K  K  E  F  F  F  L  R  I  P  G  M  I  I  D  K  E  L  E  K  G  K  S  Y  Q  *  I  N  P  P  T  P  K  G  K  :  V  S  T  A  P  T  K  I  E  E  P  K  I  Q  K  E  T  L  L  Q  N  L  G  A  G  F  G  N  Y  S  A  T  N  E  N  I  S  P  G  T  T  E  T  K  P  E  T  A  E  F  L  A  K  A  A  S  N  C  C  G  K  T  C  E  I  C  C  C  M  C  C  I  R  T  C  S  K  M  N  D  Q  C  A  I  V  L  T  Q  F  L  G  S  L  A  C  L  G  C  F  A  C  C  E  L  C  C  S  V  N  D  G  *  E  S  Y  C  I  A  S  L  Q  S  C  C  I  Q  F  L  T  *  Y  K  V  Y  I  L  C  I  M  V  S  C  E  *  Y  V  F  I  Y  I  Q  V  L  P  I  A  L  L  *  *  C  R  N  I  T  F  A  C  F  I  I  R  E  E  *  C  *  T  R  H  D  Y  L  P  D   </second_frame>
            <third_frame>   N  F  Q  *  V  F  P  T  P  V  P  D  L  S  S  K  G  P  L  V  L  S  G  R  Y  R  G  V  F  P  D  T  L  K  A  K  G  V  L  A  D  L  S  N  F  S  L  D  L  K  A  I  Q  T  K  D  I  P  L  D  K  :  *  *  S  *  Q  R  G  C  S  K  C :   W  T  H  V  R  F  S  E  N  G :   T  P  L  E  *  R :   I  G  T  K  K  V  T  K  K  R  S  F  F  F  *  E  Y  P  A  *  L  L  I  R  N  *  K  K  A  K  V  I  N  E  L  T  H  Q  P  Q  R  E  R :   F  P  L  L  L  R  R  L  K  S  L  K  Y  R  R  R  H  C  Y  R  I  W  G  L  V  L  V  T  T  V  L  Q  M  K  I  F  L  L  E  P  P  R  Q  N  L  R  Q  P  S  F  *  R  R  Q  H  L  I  V  V  E  R  H  V  K  Y  A  V  V  C  A  V  Y  G  H  V  R  K  *  M  I  N  V  Q  S  C  *  H  S  S  W  V  P  W  H  A  *  V  A  S  L  A  V  N  Y  A  V  P  L  M  M  D  E  K  V  I  A  *  L  P  C  N  L  V  V  Y  S  F  L  H  S  T  R  F  T  F  C  V  S  W  F  L  V  N  S  M  Y  L  Y  T  Y  K  F  Y  Q  L  L  Y  C  N  D  V  E  I  *  H  L  H  V  S  *  S  E  K  N  N  V  K  L  D  M  I  I  C  R  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10311" stop="10285"/>
                    <exon start="10039" stop="9704"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>360</number_coding_nucleotides>
                  <number_encoded_amino_acids>120</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>INPPTPKGKVSTAPTKIEEPKIQKETLLQNLGAGFGNYSATNENISPGTTETKPETAEFLAKAASNCCGKTCEICCCMCCIRTCSKMNDQCAIVLTQFLGSLACLGCFACCELCCSVNDG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="67174" PGL_stop="59574"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="62460" e_stop="60949"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.918"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.918">
            <gDNA_exon_boundary e_start="62460" e_stop="60949" e_length="1512"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62460" stop="61902"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335930" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62456" stop="61020"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U317064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61381" stop="60949"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335932" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGACACAAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAACGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGTTCGTTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGGTTGCCCATCACCTCGGCCGTTCTGGTAACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAACATTTGGAGGTCTGTAACTCTGTTTTGGACAATATCACTTAATATGTCCAATCTCCCCACATCCATAGCACTCTCTGGGTTCATGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCGGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTTAGTAACTTCCCGAACCCTGTCCTCTAGTGTAAGTACCGTTAAACTCACCTCCCTTTCGAAACCTTTTTGATGTCGATGTCGTAGTGAAGTCATCTGGCTTTACTCCTTCCACTTCTATCACAAAGTCTACCACCTCTTGGAAGGATTTTGCCGTTGCCGCTATCTGTAAGGCCGAAATCCGCAATTCTGACCTTAACCCCTTCACAAACCGGCGAATTCGATCTTGGGGACTGAAACATAATTGGGTGGCATATCTGGATAGTGCGCGAAACCTAGCCTCGTAAGCATTTACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTTCGGGGGATATACTTCTCCATAAAAAAGCTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTCTGTTGGTTGACACTCAATATGTGACCGCCACCACATTTTGGCGTTCCCTTGAAACTGATAACTCACGAACTCAACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCATGTCAGTCAACCAGAAAATCGTAAGCATCCTCAGATTCCACACCCTTGAAGACTGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAAACGTGGAAACGTGCCTATTTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACCTCCGGAGCCTGAGGTGCTGGTGCAGAAAACACTGGGGGTGTCTGGCCCTGATCAGACAACCCACTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTTCACTTGTTCATTCACCCCATCCTCCCCCTCTCTTATCACTTCCTCAGTCGGTGGGGGAGTCACTGCCCTAGTATCAGATGGGCTAGGTGCTCGTCCTCTTCCTCTAGAGGACGCCCTCCCACGACCTCTACCACGGCCTCTTGCCGCTGCTCTTC</gDNA_template>
            <first_frame> R  H  K  *  A  Y  Q  V  I  H  N  V  N  L  D  H  *  Q  M  R  K  I  H  K  K  T  W  I  Q  D  Q  T  I  Q  K  P  C  N  H  K  P  E  D  Y  L  *  *  Q  H  Q  M  P  P  L  Q  T  A  Q  G  K  R  N  N  G  P  Y  R  L  S  V  R  C  P  Y  H  V  V  M  *  W  L  Q  V  A  H  H  L  G  R  S  G  N  H  H  Y  L  D  H  H  V  L  Q  N  N  G  L  Y  H  D  H  L  Y  L  *  H  L  E  V  C  N  S  V  L  D  N  I  T  *  Y  V  Q  S  P  H  I  H  S  T  L  W  V  H  A  *  V  S  Q  R  S  V  D  R  S  E  V  D  P  Q  L  Q  S  V  V  K  T  E  L  V  G  L  S  N  F  P  N  P  V  L  *  C  K  Y  R  *  T  H  L  P  F  E  T  F  L  M  S  M  S  *  *  S  H  L  A  L  L  L  P  L  L  S  Q  S  L  P  P  L  G  R  I  L  P  L  P  L  S  V  R  P  K  S  A  I  L  T  L  T  P  S  Q  T  G  E  F  D  L  G  D  *  N  I  I  G  W  H  I  W  I  V  R  E  T  *  P  R  K  H  L  P  T  S  Y  L  A  L  G  S  R  T  H  P  F  S  Y  P  S  K  F  G  G  Y  T  S  P  *  K  S  *  R  M  R  P  K  S  *  V  V  P  L  L  V  D  T  Q  Y  V  T  A  T  T  F  W  R  S  L  E  T  D  N  S  R  T  Q  H  Q  T  V  L  L  Y  P  S  C  V  V  A  H  V  S  Q  P  E  N  R  K  H  P  Q  I  P  H  P  *  R  L  E  V  S  I  S  R  T  Y  *  K  V  H  A  D  H  L  S  L  *  A  Q  *  S  N  V  E  T  C  L  F  P  M  E  H  P  C  G  E  P  *  *  P  H  V  V  P  P  E  P  E  V  L  V  Q  K  T  L  G  V  S  G  P  D  Q  T  T  H  *  D  K  P  E  P  D  *  S  S  L  G  *  V  G  V  A  F  P  H  F  S  L  V  H  S  P  H  P  P  P  L  L  S  L  P  Q  S  V  G  E  S  L  P  *  Y  Q  M  G  *  V  L  V  L  F  L  *  R  T  P  S  H  D  L  Y  H  G  L  L  P  L  L  F </first_frame>
            <second_frame>  D  T  N  R  H  I  K  *  F  T  M  *  I  *  T  I  S  K  *  G  R  Y  I  R  K  R  G  S  R  I  K  Q  Y  R  S  H  A  I  T  N  Q  K  I  T  C  D  D  S  I  R  C  L  R  F  R  P  P  R  E  S  V  T  M  G  P  I  V  C  L  F  V  A  P  T  M  L  *  C  S  G  S  R  L  P  I  T  S  A  V  L  V  T  T  I  T  S  T  T  T  S  S  R  I  T  A  S  T  M  T  T  S  T  S  N  I  W  R  S  V  T  L  F  W  T  I  S  L  N  M  S  N  L  P  T  S  I  A  L  S  G  F  M  H  R  S  L  R  E  V  L  T  G  R  R  W  T  P  N  Y  S  L  *  *  R  L  N  W  S  D  L  V  T  S  R  T  L  S  S  S  V  S  T  V  K  L  T  S  L  S  K  P  F  *  C  R  C  R  S  E  V  I  W  L  Y  S  F  H  F  Y  H  K  V  Y  H  L  L  E  G  F  C  R  C  R  Y  L  *  G  R  N  P  Q  F  *  P  *  P  L  H  K  P  A  N  S  I  L  G  T  E  T  *  L  G  G  I  S  G  *  C  A  K  P  S  L  V  S  I  Y  R  H  P  T  L  L  *  A  Q  E  L  I  P  F  P  I  P  Q  S  S  G  D  I  L  L  H  K  K  A  R  E  *  G  P  S  H  R  W  C  L  C  W  L  T  L  N  M  *  P  P  P  H  F  G  V  P  L  K  L  I  T  H  E  L  N  T  K  P  F  Y  Y  T  H  L  V  *  *  L  M  S  V  N  Q  K  I  V  S  I  L  R  F  H  T  L  E  D  W  R  F  Q  F  Q  E  L  T  E  K  F  M  L  I  I  C  H  Y  R  P  S  S  Q  T  W  K  R  A  Y  F  Q  W  N  I  H  A  G  S  H  S  S  R  M  L  Y  L  R  S  L  R  C  W  C  R  K  H  W  G  C  L  A  L  I  R  Q  P  T  K  I  S  Q  N  L  I  D  H  L  W  G  R  L  G  W  H  F  L  I  F  H  L  F  I  H  P  I  L  P  L  S  Y  H  F  L  S  R  W  G  S  H  C  P  S  I  R  W  A  R  C  S  S  S  S  S  R  G  R  P  P  T  T  S  T  T  A  S  C  R  C  S   </second_frame>
            <third_frame>   T  Q  I  G  I  S  S  N  S  Q  C  K  F  R  P  L  A  N  E  E  D  T  *  E  N  V  D  P  G  S  N  N  T  E  A  M  Q  S  Q  T  R  R  L  P  V  M  T  A  S  D  A  S  A  S  D  R  P  G  K  A  *  Q  W  A  L  S  F  V  C  S  L  P  L  P  C  C  D  V  V  A  P  G  C  P  S  P  R  P  F  W  *  P  P  L  P  R  P  P  R  P  P  E  *  R  P  L  P  *  P  P  L  P  L  T  F  G  G  L  *  L  C  F  G  Q  Y  H  L  I  C  P  I  S  P  H  P  *  H  S  L  G  S  C  I  G  L  S  E  K  C  *  P  V  G  G  G  P  P  T  T  V  C  S  E  D  *  I  G  R  T  *  *  L  P  E  P  C  P  L  V  *  V  P  L  N  S  P  P  F  R  N  L  F  D  V  D  V  V  V  K  S  S  G  F  T  P  S  T  S  I  T  K  S  T  T  S  W  K  D  F  A  V  A  A  I  C  K  A  E  I  R  N  S  D  L  N  P  F  T  N  R  R  I  R  S  W  G  L  K  H  N  W  V  A  Y  L  D  S  A  R  N  L  A  S  *  A  F  T  D  I  L  P  C  S  R  L  K  N  S  S  L  F  L  S  L  K  V  R  G  I  Y  F  S  I  K  K  L  E  N  E  A  Q  V  I  G  G  A  S  V  G  *  H  S  I  C  D  R  H  H  I  L  A  F  P  *  N  *  *  L  T  N  S  T  P  N  R  S  T  I  P  I  L  C  S  S  S  C  Q  S  T  R  K  S  *  A  S  S  D  S  T  P  L  K  T  G  G  F  N  F  K  N  L  L  K  S  S  C  *  S  F  V  I  I  G  P  V  V  K  R  G  N  V  P  I  S  N  G  T  S  M  R  G  A  I  V  A  A  C  C  T  S  G  A  *  G  A  G  A  E  N  T  G  G  V  W  P  *  S  D  N  P  L  R  *  A  R  T  *  L  I  I  S  G  V  G  W  G  G  I  S  S  F  F  T  C  S  F  T  P  S  S  P  S  L  I  T  S  S  V  G  G  G  V  T  A  L  V  S  D  G  L  G  A  R  P  L  P  L  E  D  A  L  P  R  P  L  P  R  P  L  A  A  A  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61427" stop="60951"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>477</number_coding_nucleotides>
                  <number_encoded_amino_acids>159</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LMSVNQKIVSILRFHTLEDWRFQFQELTEKFMLIICHYRPSSQTWKRAYFQWNIHAGSHSSRMLYLRSLRCWCRKHWGCLALIRQPTKISQNLIDHLWGRLGWHFLIFHLFIHPILPLSYHFLSRWGSHCPSIRWARCSSSSSRGRPPTTSTTASCRCS</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="62228" stop="61974"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>252</number_coding_nucleotides>
                  <number_encoded_amino_acids>84</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CSGSRLPITSAVLVTTITSTTTSSRITASTMTTSTSNIWRSVTLFWTISLNMSNLPTSIALSGFMHRSLREVLTGRRWTPNYSL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61918" stop="61667"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>249</number_coding_nucleotides>
                  <number_encoded_amino_acids>83</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VPLNSPPFRNLFDVDVVVKSSGFTPSTSITKSTTSWKDFAVAAICKAEIRNSDLNPFTNRRIRSWGLKHNWVAYLDSARNLAS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="67174" e_stop="66887"/>
            <exon e_start="66768" e_stop="66702"/>
            <exon e_start="59733" e_stop="59574"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.927"/>
          <exon-intron don_prob="0.132" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.969"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.927">
            <gDNA_exon_boundary e_start="67174" e_stop="66887" e_length="288"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="66886" i_stop="66769" i_length="118"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="66768" e_stop="66702" e_length="67"/>
          </exon>
          <intron i_serial="2" don_prob="0.132" acc_prob="0.000">
            <gDNA_intron_boundary i_start="66701" i_stop="59734" i_length="6968"/>
          </intron>
          <exon e_serial="3" e_score="0.969">
            <gDNA_exon_boundary e_start="59733" e_stop="59574" e_length="160"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67174" stop="66887"/>
              <exon start="66768" stop="66702"/>
              <exon start="59733" stop="59574"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335078" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGTATGTATTAAGCAATATCATAAAATCAACTAATATCCTTAACATGCAGCATTTATAGTTACCATAACCCTTGGTTACAACACCAAGCACATCAATGAGGACTCACACCACCTCATCATACTCATTTGGGAATTTAGTTCATTAGATTGGATATATTATCATATTTCAAGATTCATTATCTTTATTCCCCTCGTGTCGGTACGTGACACTCCGCTCCTCAATATACTATCCTGGTACCAGAACGTGGCACCCGATCCATATTTTATCCTGGTGTCGGAACGTGACAC : CCGATCCATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTACCGGAAC : GTGGCACCCGATCCATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTACCGGAACGTGGCACCCGATCCCCTAATCTCACTACTTTCATTCATCAAGCCTTCTTTCATACCAAGGCATCATCATTATCAAAGTAGATTAGG</gDNA_template>
            <first_frame> S  M  Y  *  A  I  S  *  N  Q  L  I  S  L  T  C  S  I  Y  S  Y  H  N  P  W  L  Q  H  Q  A  H  Q  *  G  L  T  P  P  H  H  T  H  L  G  I  *  F  I  R  L  D  I  L  S  Y  F  K  I  H  Y  L  Y  S  P  R  V  G  T  *  H  S  A  P  Q  Y  T  I  L  V  P  E  R  G  T  R  S  I  F  Y  P  G  V  G  T  *  H  :  P  I  H  I  L  S  W  C  R  N  V  T  P  D  P  Y  S  I  L  V  P  E   : R  G  T  R  S  I  F  Y  P  G  V  G  T  *  H  P  I  H  I  L  S  W  Y  R  N  V  A  P  D  P  L  I  S  L  L  S  F  I  K  P  S  F  I  P  R  H  H  H  Y  Q  S  R  L   </first_frame>
            <second_frame>  V  C  I  K  Q  Y  H  K  I  N  *  Y  P  *  H  A  A  F  I  V  T  I  T  L  G  Y  N  T  K  H  I  N  E  D  S  H  H  L  I  I  L  I  W  E  F  S  S  L  D  W  I  Y  Y  H  I  S  R  F  I  I  F  I  P  L  V  S  V  R  D  T  P  L  L  N  I  L  S  W  Y  Q  N  V  A  P  D  P  Y  F  I  L  V  S  E  R  D  T :   R  S  I  F  Y  P  G  V  G  T  *  H  P  I  H  I  L  S  W  Y  R  N  :  V  A  P  D  P  Y  S  I  L  V  S  E  R  D  T  R  S  I  F  Y  P  G  T  G  T  W  H  P  I  P  *  S  H  Y  F  H  S  S  S  L  L  S  Y  Q  G  I  I  I  I  K  V  D  *  </second_frame>
            <third_frame>   Y  V  L  S  N  I  I  K  S  T  N  I  L  N  M  Q  H  L  *  L  P  *  P  L  V  T  T  P  S  T  S  M  R  T  H  T  T  S  S  Y  S  F  G  N  L  V  H  *  I  G  Y  I  I  I  F  Q  D  S  L  S  L  F  P  S  C  R  Y  V  T  L  R  S  S  I  Y  Y  P  G  T  R  T  W  H  P  I  H  I  L  S  W  C  R  N  V  T   : P  D  P  Y  S  I  L  V  S  E  R  D  T  R  S  I  F  Y  P  G  T  G  T :   W  H  P  I  H  I  L  S  W  C  R  N  V  T  P  D  P  Y  S  I  L  V  P  E  R  G  T  R  S  P  N  L  T  T  F  I  H  Q  A  F  F  H  T  K  A  S  S  L  S  K  *  I  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67028" stop="66887"/>
                    <exon start="66768" stop="66702"/>
                    <exon start="59733" stop="59580"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>360</number_coding_nucleotides>
                  <number_encoded_amino_acids>120</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IGYIIIFQDSLSLFPSCRYVTLRSSIYYPGTRTWHPIHILSWCRNVTPDPYSILVSERDTRSIFYPGTGTWHPIHILSWCRNVTPDPYSILVPERGTRSPNLTTFIHQAFFHTKASSLSK*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67131" stop="66887"/>
                    <exon start="66768" stop="66735"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>276</number_coding_nucleotides>
                  <number_encoded_amino_acids>92</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HAAFIVTITLGYNTKHINEDSHHLIILIWEFSSLDWIYYHISRFIIFIPLVSVRDTPLLNILSWYQNVAPDPYFILVSERDTRSIFYPGVGT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="59988" PGL_stop="60942"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="59988" e_stop="60942"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.947"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.947">
            <gDNA_exon_boundary e_start="59988" e_stop="60942" e_length="955"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59988" stop="60877"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U315286" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60651" stop="60942"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335073" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAATGAACTAAATTCCCAAATGAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGTTGTAACCAAGGGTTATGGTAACTATAAATGCTGCATGTTAAGGATATTAGTTGATTTTATGATATTGCTTAATACATACTGTTCCCTATTTTGAGTTGACCGATGATATCTACTCAGTACCCGTGGTTTGTACTGACCCCTACTTTTATGTTTTCTTCTGGTTATTTGTGGAGTGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCAAGCCAGTCTTCGTCACACCGGATCTTCAGGGTGAGCTAACGCGTCTAGCTTGGACTGGATCTTCTCCTTCATGTCTTGATGCCTTGAACCTCCGGCATGGACTAGCTTCTTATGTATTTTTAGCTTTTAGAAACTCTTAGAATTAGTAGTTTAAAGTAGATGTTCTTGTGATGATGACTTCCAGGTTTTGGAAATAATAGATGTTGAATATTGATAGTTATTGAATTGGTTTTTATTAATGAGTTTAAGTCTTCCGCATTATTTTCTGTTGATGTTACATTGAAATGTTAAGGTTTAGATTGGTTGGTTCGCTCACATAGGAGGGTAAGTGTGGGTGCCAGTCGCGGCCCGGATTTGGGTCGTGACAAACTTGGTATCAGAGCATTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGAGTCTTAAGGAACGGTAGGGGGACGCCTTTACTTTTCCTTGAGAGGCTATAAGACTTTAGGAAAATTTCACTCTTTCGTTCTTTCTTTCGTGCTACTACTTGAGTCCAATTGGTATCTAGGCGATATGAATTGGTATTTGACCATCTTCACTCTCTTTCGCAGATGTTTAGAACTAGAGCAACGACTACGCCTACGCCAACACCAGCACCGGCGAGACAAGGTGCGTCTGAGCCAGCCACTGGGGCTGTAG</gDNA_template>
            <first_frame> *  *  T  K  F  P  N  E  Y  D  E  E  V  *  V  L  I  D  V  L  G  V  V  T  K  G  Y  G  N  Y  K  C  C  M  L  R  I  L  V  D  F  M  I  L  L  N  T  Y  C  S  L  F  *  V  D  R  *  Y  L  L  S  T  R  G  L  Y  *  P  L  L  L  C  F  L  L  V  I  C  G  V  Q  Q  T  C  R  H  L  R  L  N  S  N  S  S  Q  S  S  S  H  R  I  F  R  V  S  *  R  V  *  L  G  L  D  L  L  L  H  V  L  M  P  *  T  S  G  M  D  *  L  L  M  Y  F  *  L  L  E  T  L  R  I  S  S  L  K  *  M  F  L  *  *  *  L  P  G  F  G  N  N  R  C  *  I  L  I  V  I  E  L  V  F  I  N  E  F  K  S  S  A  L  F  S  V  D  V  T  L  K  C  *  G  L  D  W  L  V  R  S  H  R  R  V  S  V  G  A  S  R  G  P  D  L  G  R  D  K  L  G  I  R  A  L  G  S  L  V  S  S  H  K  N  R  S  S  R  V  L  R  N  G  R  G  T  P  L  L  F  L  E  R  L  *  D  F  R  K  I  S  L  F  R  S  F  F  R  A  T  T  *  V  Q  L  V  S  R  R  Y  E  L  V  F  D  H  L  H  S  L  S  Q  M  F  R  T  R  A  T  T  T  P  T  P  T  P  A  P  A  R  Q  G  A  S  E  P  A  T  G  A  V  </first_frame>
            <second_frame>  N  E  L  N  S  Q  M  S  M  M  R  R  C  E  S  S  L  M  C  L  V  L  *  P  R  V  M  V  T  I  N  A  A  C  *  G  Y  *  L  I  L  *  Y  C  L  I  H  T  V  P  Y  F  E  L  T  D  D  I  Y  S  V  P  V  V  C  T  D  P  Y  F  Y  V  F  F  W  L  F  V  E  C  S  K  R  A  V  I  F  D  S  T  V  T  Q  A  S  L  R  H  T  G  S  S  G  *  A  N  A  S  S  L  D  W  I  F  S  F  M  S  *  C  L  E  P  P  A  W  T  S  F  L  C  I  F  S  F  *  K  L  L  E  L  V  V  *  S  R  C  S  C  D  D  D  F  Q  V  L  E  I  I  D  V  E  Y  *  *  L  L  N  W  F  L  L  M  S  L  S  L  P  H  Y  F  L  L  M  L  H  *  N  V  K  V  *  I  G  W  F  A  H  I  G  G  *  V  W  V  P  V  A  A  R  I  W  V  V  T  N  L  V  S  E  H  *  V  R  W  S  H  H  T  R  T  G  L  V  E  S  *  G  T  V  G  G  R  L  Y  F  S  L  R  G  Y  K  T  L  G  K  F  H  S  F  V  L  S  F  V  L  L  L  E  S  N  W  Y  L  G  D  M  N  W  Y  L  T  I  F  T  L  F  R  R  C  L  E  L  E  Q  R  L  R  L  R  Q  H  Q  H  R  R  D  K  V  R  L  S  Q  P  L  G  L  * </second_frame>
            <third_frame>   M  N  *  I  P  K  *  V  *  *  G  G  V  S  P  H  *  C  A  W  C  C  N  Q  G  L  W  *  L  *  M  L  H  V  K  D  I  S  *  F  Y  D  I  A  *  Y  I  L  F  P  I  L  S  *  P  M  I  S  T  Q  Y  P  W  F  V  L  T  P  T  F  M  F  S  S  G  Y  L  W  S  A  A  N  V  P  S  S  S  T  Q  Q  *  L  K  P  V  F  V  T  P  D  L  Q  G  E  L  T  R  L  A  W  T  G  S  S  P  S  C  L  D  A  L  N  L  R  H  G  L  A  S  Y  V  F  L  A  F  R  N  S  *  N  *  *  F  K  V  D  V  L  V  M  M  T  S  R  F  W  K  *  *  M  L  N  I  D  S  Y  *  I  G  F  Y  *  *  V  *  V  F  R  I  I  F  C  *  C  Y  I  E  M  L  R  F  R  L  V  G  S  L  T  *  E  G  K  C  G  C  Q  S  R  P  G  F  G  S  *  Q  T  W  Y  Q  S  I  R  F  V  G  L  I  T  Q  E  Q  V  *  *  S  L  K  E  R  *  G  D  A  F  T  F  P  *  E  A  I  R  L  *  E  N  F  T  L  S  F  F  L  S  C  Y  Y  L  S  P  I  G  I  *  A  I  *  I  G  I  *  P  S  S  L  S  F  A  D  V  *  N  *  S  N  D  Y  A  Y  A  N  T  S  T  G  E  T  R  C  V  *  A  S  H  W  G  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="60700" stop="60942"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GTVGGRLYFSLRGYKTLGKFHSFVLSFVLLLESNWYLGDMNWYLTIFTLFRRCLELEQRLRLRQHQHRRDKVRLSQPLGL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="61016" PGL_stop="61569"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="61016" e_stop="61569"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.919"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.919">
            <gDNA_exon_boundary e_start="61016" e_stop="61569" e_length="554"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61016" stop="61569"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335931" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACCTAGCCCATCTGATACTAGGGCAGTGACTCCCCCACCGACTGAGGAAGTGATAAGAGAGGGGGAGGATGGGGTGAATGAACAAGTGAAAAATGAGGAAATGCCACCCCAACCTACCCCAGAGATGATCAATCAGGTTCTGGCTTATCTTAGTGGGTTGTCTGATCAGGGCCAGACACCCCCAGTGTTTTCTGCACCAGCACCTCAGGCTCCGGAGGTACAACATGCGGCTACTATGGCTCCCCGCATGGATGTTCCATTGGAAATAGGCACGTTTCCACGTTTGACTACTGGGCCTATAATGACAAATGATCAGCATGAACTTTTCAGTAAGTTCTTGAAATTGAAACCTCCAGTCTTCAAGGGTGTGGAATCTGAGGATGCTTACGATTTTCTGGTTGACTGACATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTCGTGAGTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATATTGAGTGTCAACCAACAGAGGCACCACCTATGACTTGGGCCTCATTCT</gDNA_template>
            <first_frame> T  *  P  I  *  Y  *  G  S  D  S  P  T  D  *  G  S  D  K  R  G  G  G  W  G  E  *  T  S  E  K  *  G  N  A  T  P  T  Y  P  R  D  D  Q  S  G  S  G  L  S  *  W  V  V  *  S  G  P  D  T  P  S  V  F  C  T  S  T  S  G  S  G  G  T  T  C  G  Y  Y  G  S  P  H  G  C  S  I  G  N  R  H  V  S  T  F  D  Y  W  A  Y  N  D  K  *  S  A  *  T  F  Q  *  V  L  E  I  E  T  S  S  L  Q  G  C  G  I  *  G  C  L  R  F  S  G  *  L  T  *  A  T  T  Q  D  G  Y  S  R  T  V  W  C  *  V  R  E  L  S  V  S  R  E  R  Q  N  V  V  A  V  T  Y  *  V  S  T  N  R  G  T  T  Y  D  L  G  L  I   </first_frame>
            <second_frame>  P  S  P  S  D  T  R  A  V  T  P  P  P  T  E  E  V  I  R  E  G  E  D  G  V  N  E  Q  V  K  N  E  E  M  P  P  Q  P  T  P  E  M  I  N  Q  V  L  A  Y  L  S  G  L  S  D  Q  G  Q  T  P  P  V  F  S  A  P  A  P  Q  A  P  E  V  Q  H  A  A  T  M  A  P  R  M  D  V  P  L  E  I  G  T  F  P  R  L  T  T  G  P  I  M  T  N  D  Q  H  E  L  F  S  K  F  L  K  L  K  P  P  V  F  K  G  V  E  S  E  D  A  Y  D  F  L  V  D  *  H  E  L  L  H  K  M  G  I  V  E  R  F  G  V  E  F  V  S  Y  Q  F  Q  G  N  A  K  M  W  W  R  S  H  I  E  C  Q  P  T  E  A  P  P  M  T  W  A  S  F  </second_frame>
            <third_frame>   L  A  H  L  I  L  G  Q  *  L  P  H  R  L  R  K  *  *  E  R  G  R  M  G  *  M  N  K  *  K  M  R  K  C  H  P  N  L  P  Q  R  *  S  I  R  F  W  L  I  L  V  G  C  L  I  R  A  R  H  P  Q  C  F  L  H  Q  H  L  R  L  R  R  Y  N  M  R  L  L  W  L  P  A  W  M  F  H  W  K  *  A  R  F  H  V  *  L  L  G  L  *  *  Q  M  I  S  M  N  F  S  V  S  S  *  N  *  N  L  Q  S  S  R  V  W  N  L  R  M  L  T  I  F  W  L  T  D  M  S  Y  Y  T  R  W  V  *  *  N  G  L  V  L  S  S  *  V  I  S  F  K  G  T  P  K  C  G  G  G  H  I  L  S  V  N  Q  Q  R  H  H  L  *  L  G  P  H  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61017" stop="61421"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>402</number_coding_nucleotides>
                  <number_encoded_amino_acids>134</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PSPSDTRAVTPPPTEEVIREGEDGVNEQVKNEEMPPQPTPEMINQVLAYLSGLSDQGQTPPVFSAPAPQAPEVQHAATMAPRMDVPLEIGTFPRLTTGPIMTNDQHELFSKFLKLKPPVFKGVESEDAYDFLVD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="61643" PGL_stop="63087"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="61643" e_stop="61815"/>
            <exon e_start="62560" e_stop="63087"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.867"/>
          <exon-only e_score="0.928"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.867">
            <gDNA_exon_boundary e_start="61643" e_stop="61815" e_length="173"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="61816" i_stop="62559" i_length="744"/>
          </intron>
          <exon e_serial="2" e_score="0.928">
            <gDNA_exon_boundary e_start="62560" e_stop="63087" e_length="528"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61643" stop="61815"/>
              <exon start="62560" stop="63087"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335938" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCAAGGTAGGATGTCGGTAAATGCTTACGAGGCTAGGTTTCGCGCACTATCCAGATATGCCACCCAATTATGTTTCAGTCCCCAAGATCGAATTCGCCGGTTTGTGAAGGGGTTAAGGTCAGAATTGCGGATTTCGGCCTTACAGATAGCGGCAACGGCAAAATCCTTCCAAG : AAATGGATGATTTTGATGTGATTCTGGGTATGACTTGGCTTTCTCCGCAATTTGCAATCTTGGATTGTAATACTAAAACGGTGACGTTAGCCAAGCCTGGGACAGACCCGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTCCGCATCGTCTCCTTTCTTCGTGCTAAGAAAATGATTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTGAGTCGGTTTCAGTAGTTCGTGAGTTTCTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCGGATAGGGATATTGACTTCTGTATTGATCTCGAACCGGGCACACGCCCCATTTCTATACCCCCTTATAGAATGGCTCCCGCGGAGTTAAGAGAGTTAAAAGCACAACTTCAAGTGTTATTGAACAAAGGCTTTATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGGTTTTGTTTGTAAAGAAGAAGGATGGGAGTTTTCGAATGTGTATAGACTACA</gDNA_template>
            <first_frame> A  R  *  D  V  G  K  C  L  R  G  *  V  S  R  T  I  Q  I  C  H  P  I  M  F  Q  S  P  R  S  N  S  P  V  C  E  G  V  K  V  R  I  A  D  F  G  L  T  D  S  G  N  G  K  I  L  P  R :   N  G  *  F  *  C  D  S  G  Y  D  L  A  F  S  A  I  C  N  L  G  L  *  Y  *  N  G  D  V  S  Q  A  W  D  R  P  V  S  V  G  G  *  L  H  F  Q  S  G  P  H  R  L  L  S  S  C  *  E  N  D  *  *  R  V  F  S  F  L  G  T  S  Q  G  *  H  Y  P  S  T  F  D  *  V  G  F  S  S  S  *  V  S  G  C  V  P  C  R  S  S  W  Y  A  T  G  *  G  Y  *  L  L  Y  *  S  R  T  G  H  T  P  H  F  Y  T  P  L  *  N  G  S  R  G  V  K  R  V  K  S  T  T  S  S  V  I  E  Q  R  L  Y  *  T  K  C  I  S  L  G  C  S  G  F  V  C  K  E  E  G  W  E  F  S  N  V  Y  R  L   </first_frame>
            <second_frame>  Q  G  R  M  S  V  N  A  Y  E  A  R  F  R  A  L  S  R  Y  A  T  Q  L  C  F  S  P  Q  D  R  I  R  R  F  V  K  G  L  R  S  E  L  R  I  S  A  L  Q  I  A  A  T  A  K  S  F  Q   : E  M  D  D  F  D  V  I  L  G  M  T  W  L  S  P  Q  F  A  I  L  D  C  N  T  K  T  V  T  L  A  K  P  G  T  D  P  L  V  W  E  G  D  Y  T  S  N  P  V  R  I  V  S  F  L  R  A  K  K  M  I  S  K  G  C  L  A  F  L  A  H  L  K  D  D  T  T  Q  V  P  S  I  E  S  V  S  V  V  R  E  F  L  D  V  F  P  A  D  L  P  G  M  P  P  D  R  D  I  D  F  C  I  D  L  E  P  G  T  R  P  I  S  I  P  P  Y  R  M  A  P  A  E  L  R  E  L  K  A  Q  L  Q  V  L  L  N  K  G  F  I  R  P  S  A  S  P  W  G  A  P  V  L  F  V  K  K  K  D  G  S  F  R  M  C  I  D  Y  </second_frame>
            <third_frame>   K  V  G  C  R  *  M  L  T  R  L  G  F  A  H  Y  P  D  M  P  P  N  Y  V  S  V  P  K  I  E  F  A  G  L  *  R  G  *  G  Q  N  C  G  F  R  P  Y  R  *  R  Q  R  Q  N  P  S  K  :  K  W  M  I  L  M  *  F  W  V  *  L  G  F  L  R  N  L  Q  S  W  I  V  I  L  K  R  *  R  *  P  S  L  G  Q  T  R  *  C  G  R  V  T  T  L  P  I  R  S  A  S  S  P  F  F  V  L  R  K  *  L  V  K  G  V  *  L  S  W  H  I  S  R  M  T  L  P  K  Y  L  R  L  S  R  F  Q  *  F  V  S  F  W  M  C  S  L  Q  I  F  L  V  C  H  R  I  G  I  L  T  S  V  L  I  S  N  R  A  H  A  P  F  L  Y  P  L  I  E  W  L  P  R  S  *  E  S  *  K  H  N  F  K  C  Y  *  T  K  A  L  L  D  Q  V  H  L  L  G  V  L  R  F  C  L  *  R  R  R  M  G  V  F  E  C  V  *  T  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61644" stop="61815"/>
                    <exon start="62560" stop="63086"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>699</number_coding_nucleotides>
                  <number_encoded_amino_acids>233</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QGRMSVNAYEARFRALSRYATQLCFSPQDRIRRFVKGLRSELRISALQIAATAKSFQEMDDFDVILGMTWLSPQFAILDCNTKTVTLAKPGTDPLVWEGDYTSNPVRIVSFLRAKKMISKGCLAFLAHLKDDTTQVPSIESVSVVREFLDVFPADLPGMPPDRDIDFCIDLEPGTRPISIPPYRMAPAELRELKAQLQVLLNKGFIRPSASPWGAPVLFVKKKDGSFRMCIDY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="65918" PGL_stop="80934"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="65918" e_stop="66305"/>
            <exon e_start="80811" e_stop="80934"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.928"/>
          <exon-only e_score="0.935"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.928">
            <gDNA_exon_boundary e_start="65918" e_stop="66305" e_length="388"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="66306" i_stop="80810" i_length="14505"/>
          </intron>
          <exon e_serial="2" e_score="0.935">
            <gDNA_exon_boundary e_start="80811" e_stop="80934" e_length="124"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65918" stop="66305"/>
              <exon start="80811" stop="80934"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U346023" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAACACTTAGAAAATCTAAAATTGGGTACTGAAAATCGACTCTCTGAACTTCGTGACGGAATGGCAGGACGGACCGTCACGGGCGTGACGGACCGTCATGGAGACTTCAGTGAGAATCCACTCTCTGAACTTTGCGACGACCTGCAGGACGGACCGTCGCAGGCACGATGGCCCGTCACAGGTTGCGCAAATCCCAAGCAGAATCGGATTTCCTTACACGTTTTAAGGGACGTTTTTGGACTATTCTTTCCTTAATTATAGATTTCGTGGGTTTATATTAATAACTCAAATTCTTGGGGGTTAAAAGAGGTAACCCTAAGTTAATTAGTGGGGTATTATCGCCATCTTTTATTCTTAATAATAACTAATTAGGGTAAAAGAAAGAGG : GTTTTGAAACGAGACCCTGCGACGGTCTGTCGTGCCCATGACGGTCCGTCGTGGGGTCCGTCATTTCTGCCAGTTTTTCCAGAGTTGAAGTCTGCTGCTCAAAACGACTAAACAGGTCGTTACA</gDNA_template>
            <first_frame> K  T  L  R  K  S  K  I  G  Y  *  K  S  T  L  *  T  S  *  R  N  G  R  T  D  R  H  G  R  D  G  P  S  W  R  L  Q  *  E  S  T  L  *  T  L  R  R  P  A  G  R  T  V  A  G  T  M  A  R  H  R  L  R  K  S  Q  A  E  S  D  F  L  T  R  F  K  G  R  F  W  T  I  L  S  L  I  I  D  F  V  G  L  Y  *  *  L  K  F  L  G  V  K  R  G  N  P  K  L  I  S  G  V  L  S  P  S  F  I  L  N  N  N  *  L  G  *  K  K  E   : G  F  E  T  R  P  C  D  G  L  S  C  P  *  R  S  V  V  G  S  V  I  S  A  S  F  S  R  V  E  V  C  C  S  K  R  L  N  R  S  L   </first_frame>
            <second_frame>  K  H  L  E  N  L  K  L  G  T  E  N  R  L  S  E  L  R  D  G  M  A  G  R  T  V  T  G  V  T  D  R  H  G  D  F  S  E  N  P  L  S  E  L  C  D  D  L  Q  D  G  P  S  Q  A  R  W  P  V  T  G  C  A  N  P  K  Q  N  R  I  S  L  H  V  L  R  D  V  F  G  L  F  F  P  *  L  *  I  S  W  V  Y  I  N  N  S  N  S  W  G  L  K  E  V  T  L  S  *  L  V  G  Y  Y  R  H  L  L  F  L  I  I  T  N  *  G  K  R  K  R  :  V  L  K  R  D  P  A  T  V  C  R  A  H  D  G  P  S  W  G  P  S  F  L  P  V  F  P  E  L  K  S  A  A  Q  N  D  *  T  G  R  Y  </second_frame>
            <third_frame>   N  T  *  K  I  *  N  W  V  L  K  I  D  S  L  N  F  V  T  E  W  Q  D  G  P  S  R  A  *  R  T  V  M  E  T  S  V  R  I  H  S  L  N  F  A  T  T  C  R  T  D  R  R  R  H  D  G  P  S  Q  V  A  Q  I  P  S  R  I  G  F  P  Y  T  F  *  G  T  F  L  D  Y  S  F  L  N  Y  R  F  R  G  F  I  L  I  T  Q  I  L  G  G  *  K  R  *  P  *  V  N  *  W  G  I  I  A  I  F  Y  S  *  *  *  L  I  R  V  K  E  R  G :   F  *  N  E  T  L  R  R  S  V  V  P  M  T  V  R  R  G  V  R  H  F  C  Q  F  F  Q  S  *  S  L  L  L  K  T  T  K  Q  V  V  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="65919" stop="66173"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>252</number_coding_nucleotides>
                  <number_encoded_amino_acids>84</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KHLENLKLGTENRLSELRDGMAGRTVTGVTDRHGDFSENPLSELCDDLQDGPSQARWPVTGCANPKQNRISLHVLRDVFGLFFP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="83074" PGL_stop="85712"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="83074" e_stop="85712"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.913"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.913">
            <gDNA_exon_boundary e_start="83074" e_stop="85712" e_length="2639"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83074" stop="83786"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U326740" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83594" stop="84253"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335935" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83663" stop="84421"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U317065" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84274" stop="84830"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335930" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84278" stop="85712"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U317064" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAATCCCTTGACAAATCGGTGGTAGTAGCTCGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTTTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGAATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCCTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCGTCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCGTTCATCAGACTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGCGGTCTTTGGCACATCTGTTGCCCGTATTTTCAATTGATGATAGTCGAATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTATTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTTTATAAGGGGGTATAGAAATGGGGCGAGTACCCGGTTCAAGATCAATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGGACCAACGAAACTGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCATTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACGTACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGTATCTGTCCCAGGCTTGGATAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATATACATAAGTGTTGCTCCCCCACAAAGTTCACCAAACACGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGACATATCAAGTAATTCACAATGTAAATTTAGATCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATTGTTTGTCTTTCCATTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGTTTGCCCATCACCTCGACCATTTTGGTGACCACCATTACCTCGACCACCACGTGCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCCATTGGGGGTCTATAACTCTGTTTTGGACAATTTCTCCTAATATGTCCAATCTCCCCACATCCATAACACTCTAGAGTCAAGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCATCTACAGTTTGCAGTGAAGACTAAATGGGTCGAACTGAGTAACCTCCGGAACCCTGTCCTCTAGAGTAAGAACCATTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTCGATGCCATGGTGAATTCATCTGGCTTCACTCCTTCCACCTCTACCACGAAATCTACTACTTCTTGGAAGGATTTTGCCGTAGCCGCTACATGTAAGGCTGAAATCCGCAACTCTGACCTCAACCCCTTCACAAAACGACGAATCCGCTCTTGTGGACTGAAACAAAGTTGGGTGGCATATCTAGATAGTGCATAAAACTTAGCCTCATATGCATTGACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAGCTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTCCGTTGGTTGACACTCAACATGTGACCGCCACCACATTTTGGCGTTCCCTTGAAACTGATAACTCACGAACTCAACACCAAACCGTTCTACTATGCCCATCTTTTGTAGTAGCTCATGACAGTCAACCAGAAAATCGTAAGCATCCTCAGATTCAGCACCCTTGAAGACTGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTTATGCTGATCATTTGTCATTATAGGCCTAGTAGTCAGACGTGGAAACGTGCCTATGTCCAATGAGGCATCCATACAAGGAGCCATAGTGGCTGCATGTTGTACCTCTGAAACCGGGGGTGTTGGTGCAGAAAACACTGGAAGGGCCTGACCCTGATCAGACAACCCACTAAGATAAGCGAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCAATTCCTCATTTTGCACTTGTTTATTCTCCCCTTCCTCACCCTCTCTTACCACTTCCTTAGTCGGTGGAGGAGTCACCGCCCTAGTATCAGACGGGCT</gDNA_template>
            <first_frame> E  S  L  D  K  S  V  V  V  A  R  *  P  N  K  A  P  Y  F  *  H  I  S  R  S  Y  P  I  F  H  C  L  N  L  R  R  I  H  H  H  S  I  L  R  N  H  V  P  Q  E  G  H  C  I  *  P  K  L  T  L  R  E  L  G  I  K  L  F  L  P  Q  H  F  Q  Y  H  S  Q  M  L  L  M  F  L  L  T  F  R  V  Y  Q  Y  I  V  N  K  Y  D  H  K  E  I  Q  I  W  L  K  N  P  V  H  Q  T  H  E  R  S  R  G  I  R  K  T  K  R  H  H  Y  K  F  V  M  P  I  P  G  S  K  S  G  L  W  H  I  C  C  P  Y  F  Q  L  M  I  V  E  S  Q  V  N  L  R  E  D  T  S  T  L  *  L  I  E  Q  V  I  N  A  R  K  R  I  L  V  L  Y  G  Y  L  I  Q  L  P  V  V  Y  A  H  P  K  T  P  I  L  L  L  Y  K  Q  N  R  S  T  P  R  R  C  T  W  S  N  E  A  F  A  Q  Q  L  L  K  L  G  F  *  L  S  *  L  R  G  S  H  F  I  R  G  Y  R  N  G  A  S  T  R  F  K  I  N  T  E  V  N  I  P  I  W  W  H  T  R  K  I  C  R  E  H  I  Q  K  L  T  D  Q  R  N  *  L  N  R  R  Y  L  G  S  V  I  L  E  M  C  Q  E  S  *  T  P  F  T  N  H  F  L  S  T  K  K  G  D  D  T  Y  R  I  G  S  V  V  T  L  P  H  *  R  I  C  P  R  L  G  *  R  H  R  F  S  I  T  I  Q  D  R  K  L  R  R  K  P  S  H  T  Q  N  Y  I  K  I  I  H  F  *  D  N  Q  I  Y  I  S  V  A  P  P  Q  S  S  P  N  T  T  Y  I  P  F  Q  L  P  Q  T  H  P  P  E  *  K  H  E  *  T  Y  Q  V  I  H  N  V  N  L  D  H  *  Q  M  R  K  I  H  K  K  M  W  I  Q  D  Q  T  I  Q  K  P  C  N  H  K  P  E  D  Y  L  *  *  Q  H  Q  M  P  P  L  Q  T  A  Q  G  K  R  N  N  G  P  Y  C  L  S  F  H  C  P  Y  H  V  V  M  *  W  L  Q  F  A  H  H  L  D  H  F  G  D  H  H  Y  L  D  H  H  V  L  Q  N  N  G  L  Y  H  D  H  L  Y  L  *  P  L  G  V  Y  N  S  V  L  D  N  F  S  *  Y  V  Q  S  P  H  I  H  N  T  L  E  S  S  I  G  L  S  E  K  C  *  P  V  *  G  G  P  P  S  T  V  C  S  E  D  *  M  G  R  T  E  *  P  P  E  P  C  P  L  E  *  E  P  L  N  S  P  P  F  R  N  L  F  D  V  D  A  M  V  N  S  S  G  F  T  P  S  T  S  T  T  K  S  T  T  S  W  K  D  F  A  V  A  A  T  C  K  A  E  I  R  N  S  D  L  N  P  F  T  K  R  R  I  R  S  C  G  L  K  Q  S  W  V  A  Y  L  D  S  A  *  N  L  A  S  Y  A  L  T  D  I  L  P  C  S  R  L  K  N  S  S  L  F  L  S  L  K  V  R  G  I  Y  F  S  I  N  K  L  E  N  E  A  Q  V  I  G  G  A  S  V  G  *  H  S  T  C  D  R  H  H  I  L  A  F  P  *  N  *  *  L  T  N  S  T  P  N  R  S  T  M  P  I  F  C  S  S  S  *  Q  S  T  R  K  S  *  A  S  S  D  S  A  P  L  K  T  G  G  F  N  F  K  N  L  L  K  S  L  C  *  S  F  V  I  I  G  L  V  V  R  R  G  N  V  P  M  S  N  E  A  S  I  Q  G  A  I  V  A  A  C  C  T  S  E  T  G  G  V  G  A  E  N  T  G  R  A  *  P  *  S  D  N  P  L  R  *  A  R  T  *  L  I  I  S  G  V  G  W  G  G  N  S  S  F  C  T  C  L  F  S  P  S  S  P  S  L  T  T  S  L  V  G  G  G  V  T  A  L  V  S  D  G   </first_frame>
            <second_frame>  N  P  L  T  N  R  W  *  *  L  A  N  P  T  K  L  L  I  S  D  T  L  V  G  L  T  Q  F  F  T  V  S  I  L  E  G  S  T  I  T  P  S  L  E  T  T  C  P  K  K  D  T  A  S  S  Q  N  S  H  L  E  N  L  E  *  S  F  F  S  L  N  I  S  N  T  I  L  K  C  S  S  C  S  S  L  L  L  E  Y  I  S  I  S  S  I  N  T  I  T  K  R  S  K  Y  G  L  K  I  P  F  I  R  L  M  N  A  A  G  A  F  V  R  P  K  D  I  T  T  N  S  *  C  P  Y  L  V  L  K  A  V  F  G  T  S  V  A  R  I  F  N  *  *  *  S  N  L  K  S  I  L  E  K  T  Q  A  P  C  N  *  S  N  K  S  S  M  R  G  R  G  Y  L  F  F  M  V  T  L  F  N  C  R  *  S  M  H  I  R  K  L  P  S  F  F  F  T  N  K  T  G  A  P  Q  G  D  A  L  G  L  M  K  P  L  L  N  N  S  *  S  W  A  F  N  S  L  N  S  A  G  A  I  L  *  G  G  I  E  M  G  R  V  P  G  S  R  S  I  Q  K  S  I  S  L  S  G  G  I  P  G  R  S  A  G  N  T  S  R  N  S  R  T  N  E  T  D  S  I  E  G  T  W  V  V  S  S  L  R  C  A  K  K  A  K  H  H  L  L  T  I  F  L  A  R  R  K  E  M  I  R  T  G  L  E  V  *  S  P  S  H  T  N  V  S  V  P  G  L  D  N  V  T  V  L  A  L  Q  S  K  I  A  N  C  G  E  S  Q  V  I  P  R  I  T  S  K  S  S  I  S  K  I  T  K  Y  T  *  V  L  L  P  H  K  V  H  Q  T  R  P  I  Y  L  F  N  Y  H  R  L  T  H  R  S  R  N  T  N  R  H  I  K  *  F  T  M  *  I  *  I  I  S  K  *  G  R  Y  I  R  K  C  G  S  R  I  K  Q  Y  R  S  H  A  I  T  N  Q  K  I  T  C  D  D  S  I  R  C  L  R  F  R  P  P  R  E  S  V  T  M  G  P  I  V  C  L  S  I  A  P  T  M  L  *  C  S  G  S  S  L  P  I  T  S  T  I  L  V  T  T  I  T  S  T  T  T  C  S  R  I  T  A  S  T  M  T  T  S  T  S  S  H  W  G  S  I  T  L  F  W  T  I  S  P  N  M  S  N  L  P  T  S  I  T  L  *  S  Q  A  *  V  S  Q  R  S  V  D  R  S  E  V  D  P  H  L  Q  F  A  V  K  T  K  W  V  E  L  S  N  L  R  N  P  V  L  *  S  K  N  H  *  T  H  L  P  F  E  T  S  L  M  S  M  P  W  *  I  H  L  A  S  L  L  P  P  L  P  R  N  L  L  L  L  G  R  I  L  P  *  P  L  H  V  R  L  K  S  A  T  L  T  S  T  P  S  Q  N  D  E  S  A  L  V  D  *  N  K  V  G  W  H  I  *  I  V  H  K  T  *  P  H  M  H  *  P  T  S  Y  L  A  L  G  S  R  T  H  P  F  S  Y  P  S  K  S  G  G  Y  T  S  P  *  T  S  *  R  M  R  P  K  S  *  V  V  P  P  L  V  D  T  Q  H  V  T  A  T  T  F  W  R  S  L  E  T  D  N  S  R  T  Q  H  Q  T  V  L  L  C  P  S  F  V  V  A  H  D  S  Q  P  E  N  R  K  H  P  Q  I  Q  H  P  *  R  L  E  V  S  I  S  R  T  Y  *  K  V  Y  A  D  H  L  S  L  *  A  *  *  S  D  V  E  T  C  L  C  P  M  R  H  P  Y  K  E  P  *  W  L  H  V  V  P  L  K  P  G  V  L  V  Q  K  T  L  E  G  P  D  P  D  Q  T  T  H  *  D  K  R  E  P  D  *  S  S  L  G  *  V  G  V  A  I  P  H  F  A  L  V  Y  S  P  L  P  H  P  L  L  P  L  P  *  S  V  E  E  S  P  P  *  Y  Q  T  G  </second_frame>
            <third_frame>   I  P  *  Q  I  G  G  S  S  S  L  T  Q  Q  S  S  L  F  L  T  H  *  *  V  L  P  N  F  S  L  S  Q  S  *  K  D  P  P  S  L  H  P  *  K  P  R  A  P  R  R  T  L  H  L  A  K  T  H  T  *  R  T  W  N  K  A  F  S  P  S  T  F  P  I  P  F  S  N  A  P  H  V  P  P  Y  F  *  S  I  S  V  Y  R  Q  *  I  R  S  Q  R  D  P  N  M  A  *  K  S  R  S  S  D  S  *  T  Q  Q  G  H  S  *  D  Q  K  T  S  L  Q  I  R  N  A  H  T  W  F  *  K  R  S  L  A  H  L  L  P  V  F  S  I  D  D  S  R  I  S  S  Q  S  *  R  R  H  K  H  L  V  T  D  R  T  S  H  Q  C  E  E  E  D  T  C  S  L  W  L  P  Y  S  T  A  G  S  L  C  T  S  E  N  S  H  P  S  S  L  Q  T  K  P  E  H  P  K  E  M  H  L  V  *  *  S  L  C  S  T  T  L  E  V  G  L  L  T  L  L  T  P  R  E  P  F  Y  K  G  V  *  K  W  G  E  Y  P  V  Q  D  Q  Y  R  S  Q  Y  P  Y  L  V  A  Y  Q  E  D  L  Q  G  T  H  P  E  T  H  G  P  T  K  L  T  Q  S  K  V  L  G  *  C  H  P  *  D  V  P  R  K  L  N  T  I  Y  *  P  F  S  *  H  E  E  R  R  *  Y  V  P  D  W  K  C  S  H  P  P  T  L  T  Y  L  S  Q  A  W  I  T  S  P  F  *  H  Y  N  P  R  S  Q  I  A  E  K  A  K  S  Y  P  E  L  H  Q  N  H  P  F  L  R  *  P  N  I  H  K  C  C  S  P  T  K  F  T  K  H  D  L  Y  T  F  S  T  T  T  D  S  P  T  G  V  E  T  R  I  D  I  S  S  N  S  Q  C  K  F  R  S  L  A  N  E  E  D  T  *  E  N  V  D  P  G  S  N  N  T  E  A  M  Q  S  Q  T  R  R  L  P  V  M  T  A  S  D  A  S  A  S  D  R  P  G  K  A  *  Q  W  A  L  L  F  V  F  P  L  P  L  P  C  C  D  V  V  A  P  V  C  P  S  P  R  P  F  W  *  P  P  L  P  R  P  P  R  A  P  E  *  R  P  L  P  *  P  P  L  P  L  A  I  G  G  L  *  L  C  F  G  Q  F  L  L  I  C  P  I  S  P  H  P  *  H  S  R  V  K  H  R  S  L  R  E  V  L  T  G  L  R  W  T  P  I  Y  S  L  Q  *  R  L  N  G  S  N  *  V  T  S  G  T  L  S  S  R  V  R  T  I  K  L  T  S  L  S  K  P  L  *  C  R  C  H  G  E  F  I  W  L  H  S  F  H  L  Y  H  E  I  Y  Y  F  L  E  G  F  C  R  S  R  Y  M  *  G  *  N  P  Q  L  *  P  Q  P  L  H  K  T  T  N  P  L  L  W  T  E  T  K  L  G  G  I  S  R  *  C  I  K  L  S  L  I  C  I  D  R  H  P  T  L  L  *  A  Q  E  L  I  P  F  P  I  P  Q  S  P  G  D  I  L  L  H  K  Q  A  R  E  *  G  P  S  H  R  W  C  L  R  W  L  T  L  N  M  *  P  P  P  H  F  G  V  P  L  K  L  I  T  H  E  L  N  T  K  P  F  Y  Y  A  H  L  L  *  *  L  M  T  V  N  Q  K  I  V  S  I  L  R  F  S  T  L  E  D  W  R  F  Q  F  Q  E  L  T  E  K  F  M  L  I  I  C  H  Y  R  P  S  S  Q  T  W  K  R  A  Y  V  Q  *  G  I  H  T  R  S  H  S  G  C  M  L  Y  L  *  N  R  G  C  W  C  R  K  H  W  K  G  L  T  L  I  R  Q  P  T  K  I  S  E  N  L  I  D  H  L  W  G  R  L  G  W  Q  F  L  I  L  H  L  F  I  L  P  F  L  T  L  S  Y  H  F  L  S  R  W  R  S  H  R  P  S  I  R  R  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="83239" stop="83577"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>336</number_coding_nucleotides>
                  <number_encoded_amino_acids>112</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PKLTLRELGIKLFLPQHFQYHSQMLLMFLLTFRVYQYIVNKYDHKEIQIWLKNPVHQTHERSRGIRKTKRHHYKFVMPIPGSKSGLWHICCPYFQLMIVESQVNLREDTSTL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="83801" stop="84046"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GGIEMGRVPGSRSIQKSISLSGGIPGRSAGNTSRNSRTNETDSIEGTWVVSSLRCAKKAKHHLLTIFLARRKEMIRTGLEV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="84814" stop="85050"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EPLNSPPFRNLFDVDAMVNSSGFTPSTSTTKSTTSWKDFAVAATCKAEIRNSDLNPFTKRRIRSCGLKQSWVAYLDSA*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85506" stop="85712"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NRGCWCRKHWKGLTLIRQPTKISENLIDHLWGRLGWQFLILHLFILPFLTLSYHFLSRWRSHRPSIRRA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="85089" PGL_stop="83646"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="85089" e_stop="84917"/>
            <exon e_start="84173" e_stop="83646"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.021" e_score="0.942"/>
          <exon-only e_score="0.913"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.942">
            <gDNA_exon_boundary e_start="85089" e_stop="84917" e_length="173"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.021">
            <gDNA_intron_boundary i_start="84916" i_stop="84174" i_length="743"/>
          </intron>
          <exon e_serial="2" e_score="0.913">
            <gDNA_exon_boundary e_start="84173" e_stop="83646" e_length="528"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85089" stop="84917"/>
              <exon start="84173" stop="83646"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335938" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCAAGGTAGGATGTCGGTCAATGCATATGAGGCTAAGTTTTATGCACTATCTAGATATGCCACCCAACTTTGTTTCAGTCCACAAGAGCGGATTCGTCGTTTTGTGAAGGGGTTGAGGTCAGAGTTGCGGATTTCAGCCTTACATGTAGCGGCTACGGCAAAATCCTTCCAAG : AAATGGATGATTTTGATGTAATTCTGGGTATGACTTGGCTTTCTCCGCAATTTGCGATCTTGGATTGTAATGCTAAAACGGTGACGTTATCCAAGCCTGGGACAGATACGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTACGTATCATCTCCTTTCTTCGTGCTAAGAAAATGGTTAGTAAATGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTGAGTCAGTTTCGTTGGTCCGTGAGTTTCTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCAGATAGGGATATTGACTTCTGTATTGATCTTGAACCGGGTACTCGCCCCATTTCTATACCCCCTTATAAAATGGCTCCCGCGGAGTTAAGAGAGTTAAAAGCCCAACTTCAAGAGTTGTTGAGCAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGGTTTTGTTTGTAAAGAAGAAGGATGGGAGTTTTCGGATGTGCATAGACTACC</gDNA_template>
            <first_frame> A  R  *  D  V  G  Q  C  I  *  G  *  V  L  C  T  I  *  I  C  H  P  T  L  F  Q  S  T  R  A  D  S  S  F  C  E  G  V  E  V  R  V  A  D  F  S  L  T  C  S  G  Y  G  K  I  L  P  R :   N  G  *  F  *  C  N  S  G  Y  D  L  A  F  S  A  I  C  D  L  G  L  *  C  *  N  G  D  V  I  Q  A  W  D  R  Y  V  S  V  G  G  *  L  H  F  Q  S  G  T  Y  H  L  L  S  S  C  *  E  N  G  *  *  M  V  F  S  F  L  G  T  S  Q  G  *  H  Y  P  S  T  F  D  *  V  S  F  V  G  P  *  V  S  G  C  V  P  C  R  S  S  W  Y  A  T  R  *  G  Y  *  L  L  Y  *  S  *  T  G  Y  S  P  H  F  Y  T  P  L  *  N  G  S  R  G  V  K  R  V  K  S  P  T  S  R  V  V  E  Q  R  L  H  *  T  K  C  I  S  L  G  C  S  G  F  V  C  K  E  E  G  W  E  F  S  D  V  H  R  L   </first_frame>
            <second_frame>  Q  G  R  M  S  V  N  A  Y  E  A  K  F  Y  A  L  S  R  Y  A  T  Q  L  C  F  S  P  Q  E  R  I  R  R  F  V  K  G  L  R  S  E  L  R  I  S  A  L  H  V  A  A  T  A  K  S  F  Q   : E  M  D  D  F  D  V  I  L  G  M  T  W  L  S  P  Q  F  A  I  L  D  C  N  A  K  T  V  T  L  S  K  P  G  T  D  T  L  V  W  E  G  D  Y  T  S  N  P  V  R  I  I  S  F  L  R  A  K  K  M  V  S  K  W  C  L  A  F  L  A  H  L  K  D  D  T  T  Q  V  P  S  I  E  S  V  S  L  V  R  E  F  L  D  V  F  P  A  D  L  P  G  M  P  P  D  R  D  I  D  F  C  I  D  L  E  P  G  T  R  P  I  S  I  P  P  Y  K  M  A  P  A  E  L  R  E  L  K  A  Q  L  Q  E  L  L  S  K  G  F  I  R  P  S  A  S  P  W  G  A  P  V  L  F  V  K  K  K  D  G  S  F  R  M  C  I  D  Y  </second_frame>
            <third_frame>   K  V  G  C  R  S  M  H  M  R  L  S  F  M  H  Y  L  D  M  P  P  N  F  V  S  V  H  K  S  G  F  V  V  L  *  R  G  *  G  Q  S  C  G  F  Q  P  Y  M  *  R  L  R  Q  N  P  S  K  :  K  W  M  I  L  M  *  F  W  V  *  L  G  F  L  R  N  L  R  S  W  I  V  M  L  K  R  *  R  Y  P  S  L  G  Q  I  R  *  C  G  R  V  T  T  L  P  I  R  Y  V  S  S  P  F  F  V  L  R  K  W  L  V  N  G  V  *  L  S  W  H  I  S  R  M  T  L  P  K  Y  L  R  L  S  Q  F  R  W  S  V  S  F  W  M  C  S  L  Q  I  F  L  V  C  H  Q  I  G  I  L  T  S  V  L  I  L  N  R  V  L  A  P  F  L  Y  P  L  I  K  W  L  P  R  S  *  E  S  *  K  P  N  F  K  S  C  *  A  K  A  S  L  D  Q  V  H  L  L  G  V  L  R  F  C  L  *  R  R  R  M  G  V  F  G  C  A  *  T  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85088" stop="84917"/>
                    <exon start="84173" stop="83647"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>699</number_coding_nucleotides>
                  <number_encoded_amino_acids>233</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QGRMSVNAYEAKFYALSRYATQLCFSPQERIRRFVKGLRSELRISALHVAATAKSFQEMDDFDVILGMTWLSPQFAILDCNAKTVTLSKPGTDTLVWEGDYTSNPVRIISFLRAKKMVSKWCLAFLAHLKDDTTQVPSIESVSLVREFLDVFPADLPGMPPDRDIDFCIDLEPGTRPISIPPYKMAPAELRELKAQLQELLSKGFIRPSASPWGAPVLFVKKKDGSFRMCIDY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="85716" PGL_stop="85163"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="85716" e_stop="85163"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.903"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.903">
            <gDNA_exon_boundary e_start="85716" e_stop="85163" e_length="554"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85716" stop="85163"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335931" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACCTAGCCCGTCTGATACTAGGGCGGTGACTCCTCCACCGACTAAGGAAGTGGTAAGAGAGGGTGAGGAAGGGGAGAATAAACAAGTGCAAAATGAGGAATTGCCACCCCAACCTACCCCAGAGATGATCAATCAGGTTCTCGCTTATCTTAGTGGGTTGTCTGATCAGGGTCAGGCCCTTCCAGTGTTTTCTGCACCAACACCCCCGGTTTCAGAGGTACAACATGCAGCCACTATGGCTCCTTGTATGGATGCCTCATTGGACATAGGCACGTTTCCACGTCTGACTACTAGGCCTATAATGACAAATGATCAGCATAAACTTTTCAGTAAGTTCTTGAAATTGAAACCTCCAGTCTTCAAGGGTGCTGAATCTGAGGATGCTTACGATTTTCTGGTTGACTGTCATGAGCTACTACAAAAGATGGGCATAGTAGAACGGTTTGGTGTTGAGTTCGTGAGTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACGGAGGCACCACCTATGACTTGGGCCTCATTCT</gDNA_template>
            <first_frame> T  *  P  V  *  Y  *  G  G  D  S  S  T  D  *  G  S  G  K  R  G  *  G  R  G  E  *  T  S  A  K  *  G  I  A  T  P  T  Y  P  R  D  D  Q  S  G  S  R  L  S  *  W  V  V  *  S  G  S  G  P  S  S  V  F  C  T  N  T  P  G  F  R  G  T  T  C  S  H  Y  G  S  L  Y  G  C  L  I  G  H  R  H  V  S  T  S  D  Y  *  A  Y  N  D  K  *  S  A  *  T  F  Q  *  V  L  E  I  E  T  S  S  L  Q  G  C  *  I  *  G  C  L  R  F  S  G  *  L  S  *  A  T  T  K  D  G  H  S  R  T  V  W  C  *  V  R  E  L  S  V  S  R  E  R  Q  N  V  V  A  V  T  C  *  V  S  T  N  G  G  T  T  Y  D  L  G  L  I   </first_frame>
            <second_frame>  P  S  P  S  D  T  R  A  V  T  P  P  P  T  K  E  V  V  R  E  G  E  E  G  E  N  K  Q  V  Q  N  E  E  L  P  P  Q  P  T  P  E  M  I  N  Q  V  L  A  Y  L  S  G  L  S  D  Q  G  Q  A  L  P  V  F  S  A  P  T  P  P  V  S  E  V  Q  H  A  A  T  M  A  P  C  M  D  A  S  L  D  I  G  T  F  P  R  L  T  T  R  P  I  M  T  N  D  Q  H  K  L  F  S  K  F  L  K  L  K  P  P  V  F  K  G  A  E  S  E  D  A  Y  D  F  L  V  D  C  H  E  L  L  Q  K  M  G  I  V  E  R  F  G  V  E  F  V  S  Y  Q  F  Q  G  N  A  K  M  W  W  R  S  H  V  E  C  Q  P  T  E  A  P  P  M  T  W  A  S  F  </second_frame>
            <third_frame>   L  A  R  L  I  L  G  R  *  L  L  H  R  L  R  K  W  *  E  R  V  R  K  G  R  I  N  K  C  K  M  R  N  C  H  P  N  L  P  Q  R  *  S  I  R  F  S  L  I  L  V  G  C  L  I  R  V  R  P  F  Q  C  F  L  H  Q  H  P  R  F  Q  R  Y  N  M  Q  P  L  W  L  L  V  W  M  P  H  W  T  *  A  R  F  H  V  *  L  L  G  L  *  *  Q  M  I  S  I  N  F  S  V  S  S  *  N  *  N  L  Q  S  S  R  V  L  N  L  R  M  L  T  I  F  W  L  T  V  M  S  Y  Y  K  R  W  A  *  *  N  G  L  V  L  S  S  *  V  I  S  F  K  G  T  P  K  C  G  G  G  H  M  L  S  V  N  Q  R  R  H  H  L  *  L  G  P  H  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85715" stop="85164"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>552</number_coding_nucleotides>
                  <number_encoded_amino_acids>184</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PSPSDTRAVTPPPTKEVVREGEEGENKQVQNEELPPQPTPEMINQVLAYLSGLSDQGQALPVFSAPTPPVSEVQHAATMAPCMDASLDIGTFPRLTTRPIMTNDQHKLFSKFLKLKPPVFKGAESEDAYDFLVDCHELLQKMGIVERFGVEFVSYQFQGNAKMWWRSHVECQPTEAPPMTWASF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="87996" PGL_stop="85783"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="87996" e_stop="85783"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.900"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.900">
            <gDNA_exon_boundary e_start="87996" e_stop="85783" e_length="2214"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87996" stop="87337"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87421" stop="85827"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U315285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86068" stop="85783"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335073" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAAAAACTGGCAGAAATGACGGACCCCACGACGGACCATCATGGGCACGACGGACCGTCGCAGGGTCTCATTTCAAAACACTTAGGAAATCTGAAATTGGGTACTGAAAATCGACTCTCTGAACTTCGTAACGGAATGGCAAGACGGACCGTCACAGGCGTGATGGACCATCACAGAGTCTTCAGTGAAAATCCAGTCTCTGAACCTTGCGACGACCTGCAGGACGGACCGTCGCAGGCACAACGGGCTGTCACAGGCTGCGTAAATCCCAGTCTGAGTCGGAATTCCTCAATTGTTTTAAGGGACGTTTTTGACTATTCCTGCTTTAATTATAAAGTTAGTGGGTTAATGTTAATAAGTCTAATTACTTGGGGGTTAAAAGAGGTAACCTTAAGTTAATTAGTGGGTTATTATTGCCATATTTTATTCTTAATTATATACTAATTAGGGTAAAAGAAAGAGGGTTTGAATAAAGAAAATAGAAAGAACAAGAGAAAGAGAGAGAAAGTCGAACGAGAAAGAGGATCGAACGAGAGGAAAAAACACAAAGCTTGGGAAATCACTTGCTTGATCACGAATCTTCGGTGGAGGTAGGTTATGGTTTCTCTTACGATATTCGTAGTAAGCTCTTAATAGCGAATAATATGTATTGATAATATTGTAAACCCTTCTATGTGCTTAATTGTGTGCTTGCATGAATGTAATTATATAATTGTGATTATATAAGCATGATGAATTTATTGAATCCCAAATCTTGCAAAACCCTGATCTCTTTGTTAATGATGAGGCCTTAGTATAAAGAAGGCGTGATGAACTAAAATAATGAGATTGATGATGCCTTGGTAAGAAAGAAGGCTTGATGAATTGGTAGAAGGAGATTAGGGGATCGGGTGTCACGAACTGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACGTATATTTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAGCCGACACGTAGATTTAGGGGATCAGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCAACACGTAAATTTAGGGGAACGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGAGTGTCACGTACCGACACAAGAGGATTAATGAATATGAGGGAGCGGAGTGTCACGTACCAACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAATGAGTATCATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTAACGGTATTTGTTAATGATATAGTGCTTGTTGTTGCTACATGTTGAGTATCATAGTTGATTTTATGATATTACTTGGTATATATCAATTTCTATTTTGAGTTGGCCGGTGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTTTCTTCTTGTTTATTTGTGGAGTGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCTAGCCAGTCTTCATTACTCCGGATATCAGGGTGAGCTAATGCTTCTAGCTTGGACTGGATCTTCCTCTTCATGTCTTGATGCCTTGAAGTTTCGGCATGGACTAGCTTTTATTTGTTTTAGCTTCTTAGAATACTCTTAGTTTAGTAATTTGATCATAGATGTTCTTGTGGTGATGACTTCCAGATTTTGGGAAATAATAGTTATTGAATTGGTTTTTATTAATAAGTTTAAGTCTTCCGCATTACTTTATGTTGATATTACATTGAAATGTTAAGGTTTAGATTGGTTGGTTCGCTCACATAGGAGGGTAAGTGTGGGTGCCAGTCGCAACCCGGTTTGGGTCGTGACAAACTTGGTATCAGAGCATTTGGTTCGTTGGTCTCATCACACAAGAACGAGTCTGGTAGAGTCTTAAGGAACGGTAGGGGGACACCTTTACTTTTCTTTGAGGGGCTATAAGACTTTAGGAAAATTCCATTCTTTCATTCTTTCTTTCGTGCTATTACTTGGGTCCAATTGGTATCTAGGTGATACAAATTGGTATCTGACCATCTTCACTCTTTTTCGCAGATGGTTAGAACTAGAGCAATAATTGCGCCAACACCAACATCGGCAAGACAAGAAGCGTCCGAGCCAGCCACTGGGGCTGTAG</gDNA_template>
            <first_frame> E  K  L  A  E  M  T  D  P  T  T  D  H  H  G  H  D  G  P  S  Q  G  L  I  S  K  H  L  G  N  L  K  L  G  T  E  N  R  L  S  E  L  R  N  G  M  A  R  R  T  V  T  G  V  M  D  H  H  R  V  F  S  E  N  P  V  S  E  P  C  D  D  L  Q  D  G  P  S  Q  A  Q  R  A  V  T  G  C  V  N  P  S  L  S  R  N  S  S  I  V  L  R  D  V  F  D  Y  S  C  F  N  Y  K  V  S  G  L  M  L  I  S  L  I  T  W  G  L  K  E  V  T  L  S  *  L  V  G  Y  Y  C  H  I  L  F  L  I  I  Y  *  L  G  *  K  K  E  G  L  N  K  E  N  R  K  N  K  R  K  R  E  K  V  E  R  E  R  G  S  N  E  R  K  K  H  K  A  W  E  I  T  C  L  I  T  N  L  R  W  R  *  V  M  V  S  L  T  I  F  V  V  S  S  *  *  R  I  I  C  I  D  N  I  V  N  P  S  M  C  L  I  V  C  L  H  E  C  N  Y  I  I  V  I  I  *  A  *  *  I  Y  *  I  P  N  L  A  K  P  *  S  L  C  *  *  *  G  L  S  I  K  K  A  *  *  T  K  I  M  R  L  M  M  P  W  *  E  R  R  L  D  E  L  V  E  G  D  *  G  I  G  C  H  E  L  T  R  R  F  R  G  S  G  V  T  N  R  H  V  D  L  G  D  R  V  S  R  T  D  T  Y  I  *  G  I  G  C  H  E  P  T  R  R  F  R  G  S  G  V  T  S  R  H  V  D  L  G  D  Q  V  S  R  T  D  T  *  I  *  G  I  G  C  H  E  P  T  R  K  F  R  G  T  G  V  T  N  R  H  V  D  L  G  D  R  S  V  T  Y  R  H  K  R  I  N  E  Y  E  G  A  E  C  H  V  P  T  Q  E  K  *  R  *  *  I  L  K  D  V  N  I  L  N  L  M  S  I  I  P  K  *  V  W  Y  *  G  L  S  P  H  V  *  T  *  R  Y  L  L  M  I  *  C  L  L  L  L  H  V  E  Y  H  S  *  F  Y  D  I  T  W  Y  I  S  I  S  I  L  S  W  P  V  I  S  T  Q  Y  P  C  F  V  L  T  P  T  F  M  F  S  S  C  L  F  V  E  C  S  K  R  A  V  I  F  D  S  T  V  T  L  A  S  L  H  Y  S  G  Y  Q  G  E  L  M  L  L  A  W  T  G  S  S  S  S  C  L  D  A  L  K  F  R  H  G  L  A  F  I  C  F  S  F  L  E  Y  S  *  F  S  N  L  I  I  D  V  L  V  V  M  T  S  R  F  W  E  I  I  V  I  E  L  V  F  I  N  K  F  K  S  S  A  L  L  Y  V  D  I  T  L  K  C  *  G  L  D  W  L  V  R  S  H  R  R  V  S  V  G  A  S  R  N  P  V  W  V  V  T  N  L  V  S  E  H  L  V  R  W  S  H  H  T  R  T  S  L  V  E  S  *  G  T  V  G  G  H  L  Y  F  S  L  R  G  Y  K  T  L  G  K  F  H  S  F  I  L  S  F  V  L  L  L  G  S  N  W  Y  L  G  D  T  N  W  Y  L  T  I  F  T  L  F  R  R  W  L  E  L  E  Q  *  L  R  Q  H  Q  H  R  Q  D  K  K  R  P  S  Q  P  L  G  L  * </first_frame>
            <second_frame>  K  N  W  Q  K  *  R  T  P  R  R  T  I  M  G  T  T  D  R  R  R  V  S  F  Q  N  T  *  E  I  *  N  W  V  L  K  I  D  S  L  N  F  V  T  E  W  Q  D  G  P  S  Q  A  *  W  T  I  T  E  S  S  V  K  I  Q  S  L  N  L  A  T  T  C  R  T  D  R  R  R  H  N  G  L  S  Q  A  A  *  I  P  V  *  V  G  I  P  Q  L  F  *  G  T  F  L  T  I  P  A  L  I  I  K  L  V  G  *  C  *  *  V  *  L  L  G  G  *  K  R  *  P  *  V  N  *  W  V  I  I  A  I  F  Y  S  *  L  Y  T  N  *  G  K  R  K  R  V  *  I  K  K  I  E  R  T  R  E  R  E  R  K  S  N  E  K  E  D  R  T  R  G  K  N  T  K  L  G  K  S  L  A  *  S  R  I  F  G  G  G  R  L  W  F  L  L  R  Y  S  *  *  A  L  N  S  E  *  Y  V  L  I  I  L  *  T  L  L  C  A  *  L  C  A  C  M  N  V  I  I  *  L  *  L  Y  K  H  D  E  F  I  E  S  Q  I  L  Q  N  P  D  L  F  V  N  D  E  A  L  V  *  R  R  R  D  E  L  K  *  *  D  *  *  C  L  G  K  K  E  G  L  M  N  W  *  K  E  I  R  G  S  G  V  T  N  *  H  V  D  L  G  D  R  V  S  R  T  D  T  *  I  *  G  I  G  C  H  E  P  T  R  I  F  R  G  S  G  V  T  N  R  H  V  D  L  G  D  R  V  S  R  A  D  T  *  I  *  G  I  R  C  H  E  P  T  R  R  F  R  G  S  G  V  T  N  Q  H  V  N  L  G  E  R  V  S  R  T  D  T  *  I  *  G  I  G  V  S  R  T  D  T  R  G  L  M  N  M  R  E  R  S  V  T  Y  Q  H  K  R  N  K  D  N  E  S  *  K  M  L  I  Y  S  I  *  *  V  S  F  P  N  E  Y  G  I  E  A  *  V  L  M  C  E  L  N  G  I  C  *  *  Y  S  A  C  C  C  Y  M  L  S  I  I  V  D  F  M  I  L  L  G  I  Y  Q  F  L  F  *  V  G  R  *  Y  L  L  S  T  R  V  L  Y  *  P  L  L  L  C  F  L  L  V  Y  L  W  S  A  A  N  V  P  S  S  S  T  Q  Q  *  L  *  P  V  F  I  T  P  D  I  R  V  S  *  C  F  *  L  G  L  D  L  P  L  H  V  L  M  P  *  S  F  G  M  D  *  L  L  F  V  L  A  S  *  N  T  L  S  L  V  I  *  S  *  M  F  L  W  *  *  L  P  D  F  G  K  *  *  L  L  N  W  F  L  L  I  S  L  S  L  P  H  Y  F  M  L  I  L  H  *  N  V  K  V  *  I  G  W  F  A  H  I  G  G  *  V  W  V  P  V  A  T  R  F  G  S  *  Q  T  W  Y  Q  S  I  W  F  V  G  L  I  T  Q  E  R  V  W  *  S  L  K  E  R  *  G  D  T  F  T  F  L  *  G  A  I  R  L  *  E  N  S  I  L  S  F  F  L  S  C  Y  Y  L  G  P  I  G  I  *  V  I  Q  I  G  I  *  P  S  S  L  F  F  A  D  G  *  N  *  S  N  N  C  A  N  T  N  I  G  K  T  R  S  V  R  A  S  H  W  G  C   </second_frame>
            <third_frame>   K  T  G  R  N  D  G  P  H  D  G  P  S  W  A  R  R  T  V  A  G  S  H  F  K  T  L  R  K  S  E  I  G  Y  *  K  S  T  L  *  T  S  *  R  N  G  K  T  D  R  H  R  R  D  G  P  S  Q  S  L  Q  *  K  S  S  L  *  T  L  R  R  P  A  G  R  T  V  A  G  T  T  G  C  H  R  L  R  K  S  Q  S  E  S  E  F  L  N  C  F  K  G  R  F  *  L  F  L  L  *  L  *  S  *  W  V  N  V  N  K  S  N  Y  L  G  V  K  R  G  N  L  K  L  I  S  G  L  L  L  P  Y  F  I  L  N  Y  I  L  I  R  V  K  E  R  G  F  E  *  R  K  *  K  E  Q  E  K  E  R  E  S  R  T  R  K  R  I  E  R  E  E  K  T  Q  S  L  G  N  H  L  L  D  H  E  S  S  V  E  V  G  Y  G  F  S  Y  D  I  R  S  K  L  L  I  A  N  N  M  Y  *  *  Y  C  K  P  F  Y  V  L  N  C  V  L  A  *  M  *  L  Y  N  C  D  Y  I  S  M  M  N  L  L  N  P  K  S  C  K  T  L  I  S  L  L  M  M  R  P  *  Y  K  E  G  V  M  N  *  N  N  E  I  D  D  A  L  V  R  K  K  A  *  *  I  G  R  R  R  L  G  D  R  V  S  R  T  D  T  *  I  *  G  I  G  C  H  E  P  T  R  R  F  R  G  S  G  V  T  N  R  H  V  Y  L  G  D  R  V  S  R  T  D  T  *  I  *  G  I  G  C  H  E  P  T  R  R  F  R  G  S  G  V  T  N  R  H  V  D  L  G  D  R  V  S  R  T  N  T  *  I  *  G  N  G  C  H  E  P  T  R  R  F  R  G  S  E  C  H  V  P  T  Q  E  D  *  *  I  *  G  S  G  V  S  R  T  N  T  R  E  I  K  I  M  N  L  E  R  C  *  Y  T  Q  S  N  E  Y  H  S  Q  M  S  M  V  L  R  L  E  S  S  C  V  N  L  T  V  F  V  N  D  I  V  L  V  V  A  T  C  *  V  S  *  L  I  L  *  Y  Y  L  V  Y  I  N  F  Y  F  E  L  A  G  D  I  Y  S  V  P  V  F  C  T  D  P  Y  F  Y  V  F  F  L  F  I  C  G  V  Q  Q  T  C  R  H  L  R  L  N  S  N  S  S  Q  S  S  L  L  R  I  S  G  *  A  N  A  S  S  L  D  W  I  F  L  F  M  S  *  C  L  E  V  S  A  W  T  S  F  Y  L  F  *  L  L  R  I  L  L  V  *  *  F  D  H  R  C  S  C  G  D  D  F  Q  I  L  G  N  N  S  Y  *  I  G  F  Y  *  *  V  *  V  F  R  I  T  L  C  *  Y  Y  I  E  M  L  R  F  R  L  V  G  S  L  T  *  E  G  K  C  G  C  Q  S  Q  P  G  L  G  R  D  K  L  G  I  R  A  F  G  S  L  V  S  S  H  K  N  E  S  G  R  V  L  R  N  G  R  G  T  P  L  L  F  F  E  G  L  *  D  F  R  K  I  P  F  F  H  S  F  F  R  A  I  T  W  V  Q  L  V  S  R  *  Y  K  L  V  S  D  H  L  H  S  F  S  Q  M  V  R  T  R  A  I  I  A  P  T  P  T  S  A  R  Q  E  A  S  E  P  A  T  G  A  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="87996" stop="87598"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>396</number_coding_nucleotides>
                  <number_encoded_amino_acids>132</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EKLAEMTDPTTDHHGHDGPSQGLISKHLGNLKLGTENRLSELRNGMARRTVTGVMDHHRVFSENPVSEPCDDLQDGPSQAQRAVTGCVNPSLSRNSSIVLRDVFDYSCFNYKVSGLMLISLITWGLKEVTLS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="86595" stop="86296"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>297</number_coding_nucleotides>
                  <number_encoded_amino_acids>99</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FYDITWYISISILSWPVISTQYPCFVLTPTFMFSSCLFVECSKRAVIFDSTVTLASLHYSGYQGELMLLAWTGSSSSCLDALKFRHGLAFICFSFLEYS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="98260" PGL_stop="99220"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="98260" e_stop="98747"/>
            <exon e_start="98799" e_stop="98888"/>
            <exon e_start="98986" e_stop="99220"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.543" e_score="0.986"/>
          <exon-intron don_prob="0.986" acc_prob="0.914" e_score="0.989"/>
          <exon-only e_score="0.940"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.986">
            <gDNA_exon_boundary e_start="98260" e_stop="98747" e_length="488"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.543">
            <gDNA_intron_boundary i_start="98748" i_stop="98798" i_length="51"/>
          </intron>
          <exon e_serial="2" e_score="0.989">
            <gDNA_exon_boundary e_start="98799" e_stop="98888" e_length="90"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.914">
            <gDNA_intron_boundary i_start="98889" i_stop="98985" i_length="97"/>
          </intron>
          <exon e_serial="3" e_score="0.940">
            <gDNA_exon_boundary e_start="98986" e_stop="99220" e_length="235"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98260" stop="98747"/>
              <exon start="98799" stop="98888"/>
              <exon start="98986" stop="99220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U330684" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGAAATCCCCAAAAAGCTCTTTACATGTACCATCTTCATCCACTTCATCTGGCAATTCATCAAGTATATCTAGTGTGAGTGGTTGTGGCAACTTTGTAAATAGAGGAAGATTGAGAACGAAACAACAATTTGAGAAGCATAAAGAAGTTAGTGGAAGTTCAAGTAATAAATCAGAATTGGAAAGATATCTTGCGGAAGATATTGAGCTAGATAGTGATGACTTTGATATATTAATGTGGTGGAAAGTTAAATGAGCCGAGATTTCCTATTCTCGCGGAGATGGTTCGTGATGTGTTAGCACTTCCCATTTCAAGTGTCGCATCGGAATGTGCATTCAGCACAGGAGGTTGTGTTCTTGATCCCTTTAGGAGTTCATTAACTCCTAAAATTGTGCAATCTCTTATTTGTGTTCAAGATTGGCTTAGAAGTGAGTCTTTTCCAATCAATATTGAGGAAGATTTAGAGTATCTTGAACAACTTGAACTTG : ATTTTGCTTTTAGTGGGACTGAATCTAGTATAATTGATATATAGTTGCAGCTTGTAAGTTCAACTATCAACTAGTGATGTGCGGTAACGA : GTCCATCAATGTTTTGTTATTTTCTTGGTTGCTATCGGCTAGAACTTGGAAGCTATTGCAATGGAGGTTGCAAGTTGCAATGATGTTTTGTTGGTTTTCTAAATCTCTTTGTTGCTGGAAGTTGCAATGAGCCAGATAATGATGACTTTAGTTTGTAACTAACTCTATTTTAGTGATGGACACAAGTTTGTTGAACTTTCTTCTAGTGTTGTTGTGATGTTGTCTTGAGTCTTGA</gDNA_template>
            <first_frame> K  K  S  P  K  S  S  L  H  V  P  S  S  S  T  S  S  G  N  S  S  S  I  S  S  V  S  G  C  G  N  F  V  N  R  G  R  L  R  T  K  Q  Q  F  E  K  H  K  E  V  S  G  S  S  S  N  K  S  E  L  E  R  Y  L  A  E  D  I  E  L  D  S  D  D  F  D  I  L  M  W  W  K  V  K  *  A  E  I  S  Y  S  R  G  D  G  S  *  C  V  S  T  S  H  F  K  C  R  I  G  M  C  I  Q  H  R  R  L  C  S  *  S  L  *  E  F  I  N  S  *  N  C  A  I  S  Y  L  C  S  R  L  A  *  K  *  V  F  S  N  Q  Y  *  G  R  F  R  V  S  *  T  T  *  T  * :   F  C  F  *  W  D  *  I  *  Y  N  *  Y  I  V  A  A  C  K  F  N  Y  Q  L  V  M  C  G  N  E :   S  I  N  V  L  L  F  S  W  L  L  S  A  R  T  W  K  L  L  Q  W  R  L  Q  V  A  M  M  F  C  W  F  S  K  S  L  C  C  W  K  L  Q  *  A  R  *  *  *  L  *  F  V  T  N  S  I  L  V  M  D  T  S  L  L  N  F  L  L  V  L  L  *  C  C  L  E  S  * </first_frame>
            <second_frame>  R  N  P  Q  K  A  L  Y  M  Y  H  L  H  P  L  H  L  A  I  H  Q  V  Y  L  V  *  V  V  V  A  T  L  *  I  E  E  D  *  E  R  N  N  N  L  R  S  I  K  K  L  V  E  V  Q  V  I  N  Q  N  W  K  D  I  L  R  K  I  L  S  *  I  V  M  T  L  I  Y  *  C  G  G  K  L  N  E  P  R  F  P  I  L  A  E  M  V  R  D  V  L  A  L  P  I  S  S  V  A  S  E  C  A  F  S  T  G  G  C  V  L  D  P  F  R  S  S  L  T  P  K  I  V  Q  S  L  I  C  V  Q  D  W  L  R  S  E  S  F  P  I  N  I  E  E  D  L  E  Y  L  E  Q  L  E  L   : D  F  A  F  S  G  T  E  S  S  I  I  D  I  *  L  Q  L  V  S  S  T  I  N  *  *  C  A  V  T   : S  P  S  M  F  C  Y  F  L  G  C  Y  R  L  E  L  G  S  Y  C  N  G  G  C  K  L  Q  *  C  F  V  G  F  L  N  L  F  V  A  G  S  C  N  E  P  D  N  D  D  F  S  L  *  L  T  L  F  *  *  W  T  Q  V  C  *  T  F  F  *  C  C  C  D  V  V  L  S  L   </second_frame>
            <third_frame>   E  I  P  K  K  L  F  T  C  T  I  F  I  H  F  I  W  Q  F  I  K  Y  I  *  C  E  W  L  W  Q  L  C  K  *  R  K  I  E  N  E  T  T  I  *  E  A  *  R  S  *  W  K  F  K  *  *  I  R  I  G  K  I  S  C  G  R  Y  *  A  R  *  *  *  L  *  Y  I  N  V  V  E  S  *  M  S  R  D  F  L  F  S  R  R  W  F  V  M  C  *  H  F  P  F  Q  V  S  H  R  N  V  H  S  A  Q  E  V  V  F  L  I  P  L  G  V  H  *  L  L  K  L  C  N  L  L  F  V  F  K  I  G  L  E  V  S  L  F  Q  S  I  L  R  K  I  *  S  I  L  N  N  L  N  L  :  I  L  L  L  V  G  L  N  L  V  *  L  I  Y  S  C  S  L  *  V  Q  L  S  T  S  D  V  R  *  R  :  V  H  Q  C  F  V  I  F  L  V  A  I  G  *  N  L  E  A  I  A  M  E  V  A  S  C  N  D  V  L  L  V  F  *  I  S  L  L  L  E  V  A  M  S  Q  I  M  M  T  L  V  C  N  *  L  Y  F  S  D  G  H  K  F  V  E  L  S  S  S  V  V  V  M  L  S  *  V  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="98495" stop="98747"/>
                    <exon start="98799" stop="98842"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>294</number_coding_nucleotides>
                  <number_encoded_amino_acids>98</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CGGKLNEPRFPILAEMVRDVLALPISSVASECAFSTGGCVLDPFRSSLTPKIVQSLICVQDWLRSESFPINIEEDLEYLEQLELDFAFSGTESSIIDI*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="98260" stop="98514"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>252</number_coding_nucleotides>
                  <number_encoded_amino_acids>84</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKSPKSSLHVPSSSTSSGNSSSISSVSGCGNFVNRGRLRTKQQFEKHKEVSGSSSNKSELERYLAEDIELDSDDFDILMWWKVK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="101857" PGL_stop="101117"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="101857" e_stop="101117"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.910"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.910">
            <gDNA_exon_boundary e_start="101857" e_stop="101117" e_length="741"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101857" stop="101117"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U338284" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGATTTGATACAGGTACCACCTCACAAACTTAACGCCATGAGTTCACCTTGGCCCTTTGTAGCTTGGGGAATGGATGTCATCGGTCCTATAGAGCCAGCCGCTTCTAATGGGCACAGATTCATTCTAGTCGCCATTGATTATTTCACCAAATGGGTGGAGGCGGCTTCTTACAAGTCGGTAACCAAGAAAGTGGTGGCCGATTTTGTCCGCAACAATCTGATATGCAGATTTAGAGTTCCTGAATCCATCATTACTGATAACGACGCAAATCTCAACAGTCATTTGATGAAAGAGATATGTGAACAATTTAAGATTATTCATCGAAAGTCAACTGCCTATCGCCCCCAAATGAACGGAGTTGTAGAGGCCGCCAACAAGAATATCAAAAAGATTTTGAGGAAAATGATTGACAAACAGCGAGGTTGGCATGAAATGTTACCATATGCTTTACTAGGTTATCGAACGACGGTCAGAACATCGACTGGGCTACTCCATACTTGCTAGTATATGGAACAGAGACAGTCTTACCTGTTGAGGTCGAGATACCATAGTTGAGGATCATCCAAGAAGCTGAATTAAGTAACGCCGAATGGGTTAATAAATGGATTGATCAACTGGCTTTGATTGATGAGAAGAGAATGGTCGCCGTTTGCCATGGCCCAGTTGTATAGACAGAGAATGACTCGCGCTTTTCACAAAAGAGTAAGAGCCAGAAATTTTGAAGTTGGTCAGTTGGTTCT</gDNA_template>
            <first_frame> R  F  D  T  G  T  T  S  Q  T  *  R  H  E  F  T  L  A  L  C  S  L  G  N  G  C  H  R  S  Y  R  A  S  R  F  *  W  A  Q  I  H  S  S  R  H  *  L  F  H  Q  M  G  G  G  G  F  L  Q  V  G  N  Q  E  S  G  G  R  F  C  P  Q  Q  S  D  M  Q  I  *  S  S  *  I  H  H  Y  *  *  R  R  K  S  Q  Q  S  F  D  E  R  D  M  *  T  I  *  D  Y  S  S  K  V  N  C  L  S  P  P  N  E  R  S  C  R  G  R  Q  Q  E  Y  Q  K  D  F  E  E  N  D  *  Q  T  A  R  L  A  *  N  V  T  I  C  F  T  R  L  S  N  D  G  Q  N  I  D  W  A  T  P  Y  L  L  V  Y  G  T  E  T  V  L  P  V  E  V  E  I  P  *  L  R  I  I  Q  E  A  E  L  S  N  A  E  W  V  N  K  W  I  D  Q  L  A  L  I  D  E  K  R  M  V  A  V  C  H  G  P  V  V  *  T  E  N  D  S  R  F  S  Q  K  S  K  S  Q  K  F  *  S  W  S  V  G  S </first_frame>
            <second_frame>  D  L  I  Q  V  P  P  H  K  L  N  A  M  S  S  P  W  P  F  V  A  W  G  M  D  V  I  G  P  I  E  P  A  A  S  N  G  H  R  F  I  L  V  A  I  D  Y  F  T  K  W  V  E  A  A  S  Y  K  S  V  T  K  K  V  V  A  D  F  V  R  N  N  L  I  C  R  F  R  V  P  E  S  I  I  T  D  N  D  A  N  L  N  S  H  L  M  K  E  I  C  E  Q  F  K  I  I  H  R  K  S  T  A  Y  R  P  Q  M  N  G  V  V  E  A  A  N  K  N  I  K  K  I  L  R  K  M  I  D  K  Q  R  G  W  H  E  M  L  P  Y  A  L  L  G  Y  R  T  T  V  R  T  S  T  G  L  L  H  T  C  *  Y  M  E  Q  R  Q  S  Y  L  L  R  S  R  Y  H  S  *  G  S  S  K  K  L  N  *  V  T  P  N  G  L  I  N  G  L  I  N  W  L  *  L  M  R  R  E  W  S  P  F  A  M  A  Q  L  Y  R  Q  R  M  T  R  A  F  H  K  R  V  R  A  R  N  F  E  V  G  Q  L  V   </second_frame>
            <third_frame>   I  *  Y  R  Y  H  L  T  N  L  T  P  *  V  H  L  G  P  L  *  L  G  E  W  M  S  S  V  L  *  S  Q  P  L  L  M  G  T  D  S  F  *  S  P  L  I  I  S  P  N  G  W  R  R  L  L  T  S  R  *  P  R  K  W  W  P  I  L  S  A  T  I  *  Y  A  D  L  E  F  L  N  P  S  L  L  I  T  T  Q  I  S  T  V  I  *  *  K  R  Y  V  N  N  L  R  L  F  I  E  S  Q  L  P  I  A  P  K  *  T  E  L  *  R  P  P  T  R  I  S  K  R  F  *  G  K  *  L  T  N  S  E  V  G  M  K  C  Y  H  M  L  Y  *  V  I  E  R  R  S  E  H  R  L  G  Y  S  I  L  A  S  I  W  N  R  D  S  L  T  C  *  G  R  D  T  I  V  E  D  H  P  R  S  *  I  K  *  R  R  M  G  *  *  M  D  *  S  T  G  F  D  *  *  E  E  N  G  R  R  L  P  W  P  S  C  I  D  R  E  *  L  A  L  F  T  K  E  *  E  P  E  I  L  K  L  V  S  W  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="101856" stop="101353"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>501</number_coding_nucleotides>
                  <number_encoded_amino_acids>167</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DLIQVPPHKLNAMSSPWPFVAWGMDVIGPIEPAASNGHRFILVAIDYFTKWVEAASYKSVTKKVVADFVRNNLICRFRVPESIITDNDANLNSHLMKEICEQFKIIHRKSTAYRPQMNGVVEAANKNIKKILRKMIDKQRGWHEMLPYALLGYRTTVRTSTGLLHTC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="113850" PGL_stop="113514"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="113850" e_stop="113514"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.911"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.911">
            <gDNA_exon_boundary e_start="113850" e_stop="113514" e_length="337"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113850" stop="113514"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335079" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACTGAGTAGATATAATCGGCCAACTCAAAATAGAAAACAATATATACCAAGTAATATCATAAAATCAACTATGATACTCAACATGTAGCAACAACAAGTACTATATCATTAACAATTACCGTCAAGTTCACACATGAGGACTCAAGCCTCAATACCATACTCATTTGGGAATCATGTTCATTAGATTGAGTATATTAATATCTTTCAAGATTCATTATCTTTATTTCTCTTGTGTCGGTACGTGACACTCCGCTCCCTCATATCCATTAATCCTCTTGTGTCGGTACGTGACACTCCGATCCCCTAAATCTACGTGTCGGTTCGTGACACCCGATCC</gDNA_template>
            <first_frame> T  E  *  I  *  S  A  N  S  K  *  K  T  I  Y  T  K  *  Y  H  K  I  N  Y  D  T  Q  H  V  A  T  T  S  T  I  S  L  T  I  T  V  K  F  T  H  E  D  S  S  L  N  T  I  L  I  W  E  S  C  S  L  D  *  V  Y  *  Y  L  S  R  F  I  I  F  I  S  L  V  S  V  R  D  T  P  L  P  H  I  H  *  S  S  C  V  G  T  *  H  S  D  P  L  N  L  R  V  G  S  *  H  P  I  </first_frame>
            <second_frame>  L  S  R  Y  N  R  P  T  Q  N  R  K  Q  Y  I  P  S  N  I  I  K  S  T  M  I  L  N  M  *  Q  Q  Q  V  L  Y  H  *  Q  L  P  S  S  S  H  M  R  T  Q  A  S  I  P  Y  S  F  G  N  H  V  H  *  I  E  Y  I  N  I  F  Q  D  S  L  S  L  F  L  L  C  R  Y  V  T  L  R  S  L  I  S  I  N  P  L  V  S  V  R  D  T  P  I  P  *  I  Y  V  S  V  R  D  T  R  S </second_frame>
            <third_frame>   *  V  D  I  I  G  Q  L  K  I  E  N  N  I  Y  Q  V  I  S  *  N  Q  L  *  Y  S  T  C  S  N  N  K  Y  Y  I  I  N  N  Y  R  Q  V  H  T  *  G  L  K  P  Q  Y  H  T  H  L  G  I  M  F  I  R  L  S  I  L  I  S  F  K  I  H  Y  L  Y  F  S  C  V  G  T  *  H  S  A  P  S  Y  P  L  I  L  L  C  R  Y  V  T  L  R  S  P  K  S  T  C  R  F  V  T  P  D   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0284C08.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="116143" PGL_stop="114785"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="116143" e_stop="114785"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.951"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.951">
            <gDNA_exon_boundary e_start="116143" e_stop="114785" e_length="1359"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116143" stop="115431"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U326740" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115623" stop="114965"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335935" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115554" stop="114797"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U317065" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115327" stop="114785"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335939" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115151" stop="114821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335937" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAATCCCTTGACGAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCATGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAAAATTTCCAATACCATTCTCAAATGCTCCTCATGTTCTTTCTTGCTCTTTGAGTATATCAGTATATCATCAATAAATACGATCACGAAGAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGATCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTCGTTTGAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACTGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGGTACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTTACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATAAAGCCTTTGTTTAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCTGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCCGGTTCAAGATCAATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCGCGGACCACCGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACGCACCGGATTGGAAGTGTAGTCACCCTTCCACACTAACGGAACTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACGAAGTTCACCAAACAGGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGAATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGC</gDNA_template>
            <first_frame> E  S  L  D  E  S  A  V  V  A  S  *  P  N  K  A  P  Y  F  *  H  I  S  R  S  Y  P  I  L  H  C  L  N  L  R  R  I  H  H  H  S  I  L  R  N  H  V  P  Q  E  G  H  C  I  *  P  K  L  T  L  R  E  L  G  I  K  L  F  L  P  Q  N  F  Q  Y  H  S  Q  M  L  L  M  F  F  L  A  L  *  V  Y  Q  Y  I  I  N  K  Y  D  H  E  E  V  Q  I  W  L  K  N  P  V  H  Q  D  H  E  R  S  R  G  I  R  K  T  K  R  H  H  Y  K  F  V  M  P  I  P  R  L  K  S  S  L  W  H  I  R  C  P  Y  F  Q  L  M  I  T  G  S  Q  V  N  L  R  E  D  T  S  T  L  *  L  I  E  Q  V  I  N  A  R  K  R  V  L  V  L  Y  G  Y  L  V  Q  L  P  V  V  Y  A  H  P  K  T  P  I  L  L  L  Y  K  Q  N  R  S  T  P  R  R  C  T  W  S  N  K  A  F  V  *  Q  L  L  K  L  G  F  *  L  S  *  L  C  G  S  H  S  I  R  G  Y  R  N  G  A  S  T  R  F  K  I  N  T  E  V  N  I  P  I  W  W  H  T  R  K  I  C  R  E  H  I  Q  K  L  A  D  H  R  N  R  L  N  R  R  Y  L  G  S  V  I  L  E  M  C  Q  E  S  *  T  P  F  T  N  H  F  L  S  T  K  K  G  D  D  T  H  R  I  G  S  V  V  T  L  P  H  *  R  N  C  P  R  L  G  *  R  H  R  F  S  I  T  I  Q  D  R  K  L  R  R  K  P  S  H  T  Q  N  Y  I  K  I  I  H  F  *  D  N  Q  I  Y  I  S  V  A  P  H  E  V  H  Q  T  G  P  I  Y  L  F  N  Y  H  R  L  T  H  R  S  R  N  T  N  R  N  I  K  *  F  T  M  *  I  *  T  I  S  K  *  G  R  Y  I  R  K  C  G  S  R  I  K  Q  Y  R  S  H  A  I  T  N  Q  K  I  T  C  D  D  S  I  R  C  L  R </first_frame>
            <second_frame>  N  P  L  T  N  R  R  *  *  L  A  N  P  T  K  L  L  I  S  D  T  L  V  G  L  T  Q  F  F  T  V  S  I  L  E  G  S  T  I  T  P  S  L  E  T  M  C  P  K  K  D  T  A  S  S  Q  N  S  H  L  E  N  L  A  *  S  F  F  S  L  K  I  S  N  T  I  L  K  C  S  S  C  S  F  L  L  F  E  Y  I  S  I  S  S  I  N  T  I  T  K  R  S  K  Y  G  L  K  I  P  F  I  K  I  M  N  A  A  G  A  F  V  R  P  K  D  I  T  T  N  S  *  C  P  Y  L  V  *  K  A  V  F  G  T  S  V  A  R  I  F  N  *  *  *  L  D  L  K  S  I  L  E  K  T  Q  A  P  C  N  *  S  N  K  S  S  M  R  G  R  G  Y  L  F  F  M  V  T  L  F  N  C  R  *  S  M  H  I  R  K  L  P  S  F  F  F  T  N  K  I  G  A  P  Q  G  D  A  L  G  L  I  K  P  L  F  N  N  S  *  S  W  A  F  N  S  L  N  S  A  G  A  I  L  *  G  G  I  E  M  G  R  V  P  G  S  R  S  I  Q  K  S  I  S  L  S  G  G  I  P  G  R  S  A  G  N  T  S  R  N  S  R  T  T  E  T  D  S  I  E  G  T  W  V  V  S  S  L  R  C  A  K  K  A  K  H  P  L  L  T  I  F  L  A  R  R  K  E  M  I  R  T  G  L  E  V  *  S  P  F  H  T  N  G  T  V  P  G  L  A  N  V  T  V  L  A  L  Q  S  K  I  A  N  C  G  E  S  Q  V  I  P  R  I  T  S  K  S  S  I  S  K  I  T  K  S  T  *  V  L  L  P  T  K  F  T  K  Q  D  L  Y  T  F  S  T  T  T  D  S  P  T  G  V  E  T  R  I  G  I  S  S  N  S  Q  C  K  F  R  P  L  A  N  E  E  D  T  *  E  N  V  D  P  G  S  N  N  T  E  A  M  Q  S  Q  T  R  R  L  P  V  M  T  A  S  D  A  S   </second_frame>
            <third_frame>   I  P  *  R  I  G  G  S  S  *  L  T  Q  Q  S  S  L  F  L  T  H  *  *  V  L  P  N  S  S  L  S  Q  S  *  K  D  P  P  S  L  H  P  *  K  P  C  A  P  R  R  T  L  H  L  A  K  T  H  T  *  R  T  W  H  K  A  F  S  P  S  K  F  P  I  P  F  S  N  A  P  H  V  L  S  C  S  L  S  I  S  V  Y  H  Q  *  I  R  S  R  R  G  P  N  M  A  *  K  S  R  S  S  R  S  *  T  Q  Q  G  H  S  *  D  Q  K  T  S  L  Q  I  R  N  A  H  T  S  F  E  K  Q  S  L  A  H  P  L  P  V  F  S  I  D  D  N  W  I  S  S  Q  S  *  R  R  H  K  H  L  V  T  D  R  T  S  H  Q  C  E  E  E  G  T  C  S  L  W  L  P  C  S  T  A  G  S  L  C  T  S  E  N  S  H  P  S  S  L  Q  T  K  S  E  H  P  K  E  M  H  L  V  *  *  S  L  C  L  T  T  L  E  V  G  L  L  T  L  L  T  L  R  E  P  F  Y  K  G  V  *  K  W  G  E  Y  P  V  Q  D  Q  Y  R  S  Q  Y  P  Y  L  V  A  Y  Q  E  D  L  Q  G  T  H  P  E  T  R  G  P  P  K  P  T  Q  S  K  V  L  G  *  C  H  P  *  D  V  P  R  K  L  N  T  L  Y  *  P  F  S  *  H  E  E  R  R  *  Y  A  P  D  W  K  C  S  H  P  S  T  L  T  E  L  S  Q  A  W  L  T  S  P  F  *  H  Y  N  P  R  S  Q  I  A  E  K  A  K  S  Y  P  E  L  H  Q  N  H  P  F  L  R  *  P  N  L  H  K  C  C  S  P  R  S  S  P  N  R  T  Y  I  P  F  Q  L  P  Q  T  H  P  P  E  *  K  H  E  *  E  Y  Q  V  I  H  N  V  N  L  D  H  *  Q  M  R  K  I  H  K  K  M  W  I  Q  D  Q  T  I  Q  K  P  C  N  H  K  P  E  D  Y  L  *  *  Q  H  Q  M  P  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="115416" stop="115171"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GGIEMGRVPGSRSIQKSISLSGGIPGRSAGNTSRNSRTTETDSIEGTWVVSSLRCAKKAKHPLLTIFLARRKEMIRTGLEV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="115879" stop="115640"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VYQYIINKYDHEEVQIWLKNPVHQDHERSRGIRKTKRHHYKFVMPIPRLKSSLWHIRCPYFQLMITGSQVNLREDTSTL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="115438" stop="115238"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LCGSHSIRGYRNGASTRFKINTEVNIPIWWHTRKICREHIQKLADHRNRLNRRYLGSVILEMCQES*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="115947" stop="115750"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFFSLKISNTILKCSSCSFLLFEYISISSINTITKRSKYGLKIPFIKIMNAAGAFVRPKDITTNS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="117624" PGL_stop="117448"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="117624" e_stop="117448"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.955"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.955">
            <gDNA_exon_boundary e_start="117624" e_stop="117448" e_length="177"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="117624" stop="117448"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U345909" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTACATCTCCTACCATACAATGCTTCAAATGGAGCCATATCAATGCTTGAGTGATAGCTATTATTGTATGAAAATTCCGCTAAGGGTAAGAAGCTATCGCAATGGCCACCAAACTCTATCACACATGCGCGAAGCATATCCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</gDNA_template>
            <first_frame> L  H  L  L  P  Y  N  A  S  N  G  A  I  S  M  L  E  *  *  L  L  L  Y  E  N  S  A  K  G  K  K  L  S  Q  W  P  P  N  S  I  T  H  A  R  S  I  S  S  N  T  *  I  V  R  S  D  *  P  S </first_frame>
            <second_frame>  Y  I  S  Y  H  T  M  L  Q  M  E  P  Y  Q  C  L  S  D  S  Y  Y  C  M  K  I  P  L  R  V  R  S  Y  R  N  G  H  Q  T  L  S  H  M  R  E  A  Y  P  P  T  L  E  S  F  A  Q  T  D  H   </second_frame>
            <third_frame>   T  S  P  T  I  Q  C  F  K  W  S  H  I  N  A  *  V  I  A  I  I  V  *  K  F  R  *  G  *  E  A  I  A  M  A  T  K  L  Y  H  T  C  A  K  H  I  L  Q  H  L  N  R  S  L  R  L  T  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0284C08.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="133370" PGL_stop="133888"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="133370" e_stop="133888"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.950"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.950">
            <gDNA_exon_boundary e_start="133370" e_stop="133888" e_length="519"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133370" stop="133888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U343095" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTGAGCGGAAAGTATGTTGTTGTGGTAGATTTCAACTAGATGAGATACCTTGTTCACATGCAATCACTGTATTGAAAAAAAAGAATGTCACCGATATAAATCCGTATTGCTCTGATTATTACAAGCCTGATGCGTTGGCAAAAATATATGAAATTCCAATGGTGCCAATGCCAGATAAGAAAGATTGGTCAGATCCTAAACACGTGGTAGCTGAAACTGTGCATCCACCTAGATACAGAAGATCATCTGGACGACCAAGAAAAAGAAGAAGAAAGAATGCAGATGAAAAGATTTCGGTGAACACAAACTGTTGTGGACAATGTGGACAAGAAGGGCACAACAGAAGAACTTGTACTTTCTACCCAAAAGAGAAGTGAATTAGTCGCAATGTTTCTATGATATCAAGAATAATTTATAACGTAAACATTTTAATGAATTTCAGTTTTCATTACAACTGCAAATTGAACACTTTTTGTTTAGATAAATAAACGTACAAACATGTGGTAATTAAATTTGAA</gDNA_template>
            <first_frame> L  E  R  K  V  C  C  C  G  R  F  Q  L  D  E  I  P  C  S  H  A  I  T  V  L  K  K  K  N  V  T  D  I  N  P  Y  C  S  D  Y  Y  K  P  D  A  L  A  K  I  Y  E  I  P  M  V  P  M  P  D  K  K  D  W  S  D  P  K  H  V  V  A  E  T  V  H  P  P  R  Y  R  R  S  S  G  R  P  R  K  R  R  R  K  N  A  D  E  K  I  S  V  N  T  N  C  C  G  Q  C  G  Q  E  G  H  N  R  R  T  C  T  F  Y  P  K  E  K  *  I  S  R  N  V  S  M  I  S  R  I  I  Y  N  V  N  I  L  M  N  F  S  F  H  Y  N  C  K  L  N  T  F  C  L  D  K  *  T  Y  K  H  V  V  I  K  F  E </first_frame>
            <second_frame>  L  S  G  K  Y  V  V  V  V  D  F  N  *  M  R  Y  L  V  H  M  Q  S  L  Y  *  K  K  R  M  S  P  I  *  I  R  I  A  L  I  I  T  S  L  M  R  W  Q  K  Y  M  K  F  Q  W  C  Q  C  Q  I  R  K  I  G  Q  I  L  N  T  W  *  L  K  L  C  I  H  L  D  T  E  D  H  L  D  D  Q  E  K  E  E  E  R  M  Q  M  K  R  F  R  *  T  Q  T  V  V  D  N  V  D  K  K  G  T  T  E  E  L  V  L  S  T  Q  K  R  S  E  L  V  A  M  F  L  *  Y  Q  E  *  F  I  T  *  T  F  *  *  I  S  V  F  I  T  T  A  N  *  T  L  F  V  *  I  N  K  R  T  N  M  W  *  L  N  L   </second_frame>
            <third_frame>   *  A  E  S  M  L  L  W  *  I  S  T  R  *  D  T  L  F  T  C  N  H  C  I  E  K  K  E  C  H  R  Y  K  S  V  L  L  *  L  L  Q  A  *  C  V  G  K  N  I  *  N  S  N  G  A  N  A  R  *  E  R  L  V  R  S  *  T  R  G  S  *  N  C  A  S  T  *  I  Q  K  I  I  W  T  T  K  K  K  K  K  K  E  C  R  *  K  D  F  G  E  H  K  L  L  W  T  M  W  T  R  R  A  Q  Q  K  N  L  Y  F  L  P  K  R  E  V  N  *  S  Q  C  F  Y  D  I  K  N  N  L  *  R  K  H  F  N  E  F  Q  F  S  L  Q  L  Q  I  E  H  F  L  F  R  *  I  N  V  Q  T  C  G  N  *  I  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="133370" stop="133747"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>375</number_coding_nucleotides>
                  <number_encoded_amino_acids>125</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LERKVCCCGRFQLDEIPCSHAITVLKKKNVTDINPYCSDYYKPDALAKIYEIPMVPMPDKKDWSDPKHVVAETVHPPRYRRSSGRPRKRRRKNADEKISVNTNCCGQCGQEGHNRRTCTFYPKEK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="137300" PGL_stop="136392"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="137300" e_stop="137018"/>
            <exon e_start="136816" e_stop="136694"/>
            <exon e_start="136612" e_stop="136392"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.963" acc_prob="0.971" e_score="0.908"/>
          <exon-intron don_prob="0.991" acc_prob="0.908" e_score="0.951"/>
          <exon-only e_score="0.950"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.908">
            <gDNA_exon_boundary e_start="137300" e_stop="137018" e_length="283"/>
          </exon>
          <intron i_serial="1" don_prob="0.963" acc_prob="0.971">
            <gDNA_intron_boundary i_start="137017" i_stop="136817" i_length="201"/>
          </intron>
          <exon e_serial="2" e_score="0.951">
            <gDNA_exon_boundary e_start="136816" e_stop="136694" e_length="123"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.908">
            <gDNA_intron_boundary i_start="136693" i_stop="136613" i_length="81"/>
          </intron>
          <exon e_serial="3" e_score="0.950">
            <gDNA_exon_boundary e_start="136612" e_stop="136392" e_length="221"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="137300" stop="137018"/>
              <exon start="136816" stop="136694"/>
              <exon start="136612" stop="136392"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U342680" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AACTGATTATTTTGATAAAAGCAAATCACACCAGCTGATGCGATCCATTAGAAAAGAGAACATCAATTTCCAGGCTGATACAAGCACATTTCAGTCTAACAAACAAACATCTCAGCAAATACCAGTTGATCTCGATGATATGGGTGGTGTAGCTGAGGATGGTGGTGGTTTTTCTGGTAAAAATGGTGAGCATCATATCGTCGACAATGCAAGGGATGTCGATATGGATGGTGTTGGTGTTTCCGTAAATGAGGGTGAATAAATAGTCAGTGATAATCTAAAG : GATGGTGACGCACATCAGTCGCACCAAGAATTAAATGAACATATCATGGACCAAGCCGTTGATGACAATGTTCATCACAACATCTCTCATGTGTTGCCCGAAAAAACAACAACGGATTCATCG : AGGATTCTTCAACTTCAACAACAATATCGCCATCAACTCAAGCGGCAATAGATGCGCTTATCAAAGATTTGGGTAAAGATGCTACTAATGCTAGACCATTATATTCTTACGATTCACAGAATATAACTAGCAGCCAGTACTTGTTGATCGACCGTCAATTACCCACTGATATTCCAATAACGGAGATTGCTGTTAAATCTGATGCAGTCACTCCTGCGCAT</gDNA_template>
            <first_frame> N  *  L  F  *  *  K  Q  I  T  P  A  D  A  I  H  *  K  R  E  H  Q  F  P  G  *  Y  K  H  I  S  V  *  Q  T  N  I  S  A  N  T  S  *  S  R  *  Y  G  W  C  S  *  G  W  W  W  F  F  W  *  K  W  *  A  S  Y  R  R  Q  C  K  G  C  R  Y  G  W  C  W  C  F  R  K  *  G  *  I  N  S  Q  *  *  S  K   : G  W  *  R  T  S  V  A  P  R  I  K  *  T  Y  H  G  P  S  R  *  *  Q  C  S  S  Q  H  L  S  C  V  A  R  K  N  N  N  G  F  I   : E  D  S  S  T  S  T  T  I  S  P  S  T  Q  A  A  I  D  A  L  I  K  D  L  G  K  D  A  T  N  A  R  P  L  Y  S  Y  D  S  Q  N  I  T  S  S  Q  Y  L  L  I  D  R  Q  L  P  T  D  I  P  I  T  E  I  A  V  K  S  D  A  V  T  P  A  H </first_frame>
            <second_frame>  T  D  Y  F  D  K  S  K  S  H  Q  L  M  R  S  I  R  K  E  N  I  N  F  Q  A  D  T  S  T  F  Q  S  N  K  Q  T  S  Q  Q  I  P  V  D  L  D  D  M  G  G  V  A  E  D  G  G  G  F  S  G  K  N  G  E  H  H  I  V  D  N  A  R  D  V  D  M  D  G  V  G  V  S  V  N  E  G  E  *  I  V  S  D  N  L  K  :  D  G  D  A  H  Q  S  H  Q  E  L  N  E  H  I  M  D  Q  A  V  D  D  N  V  H  H  N  I  S  H  V  L  P  E  K  T  T  T  D  S  S  :  R  I  L  Q  L  Q  Q  Q  Y  R  H  Q  L  K  R  Q  *  M  R  L  S  K  I  W  V  K  M  L  L  M  L  D  H  Y  I  L  T  I  H  R  I  *  L  A  A  S  T  C  *  S  T  V  N  Y  P  L  I  F  Q  *  R  R  L  L  L  N  L  M  Q  S  L  L  R   </second_frame>
            <third_frame>   L  I  I  L  I  K  A  N  H  T  S  *  C  D  P  L  E  K  R  T  S  I  S  R  L  I  Q  A  H  F  S  L  T  N  K  H  L  S  K  Y  Q  L  I  S  M  I  W  V  V  *  L  R  M  V  V  V  F  L  V  K  M  V  S  I  I  S  S  T  M  Q  G  M  S  I  W  M  V  L  V  F  P  *  M  R  V  N  K  *  S  V  I  I  *  R :   M  V  T  H  I  S  R  T  K  N  *  M  N  I  S  W  T  K  P  L  M  T  M  F  I  T  T  S  L  M  C  C  P  K  K  Q  Q  R  I  H  R :   G  F  F  N  F  N  N  N  I  A  I  N  S  S  G  N  R  C  A  Y  Q  R  F  G  *  R  C  Y  *  C  *  T  I  I  F  L  R  F  T  E  Y  N  *  Q  P  V  L  V  D  R  P  S  I  T  H  *  Y  S  N  N  G  D  C  C  *  I  *  C  S  H  S  C  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="136751" stop="136694"/>
                    <exon start="136612" stop="136392"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>279</number_coding_nucleotides>
                  <number_encoded_amino_acids>93</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QCSSQHLSCVARKNNNGFIEDSSTSTTISPSTQAAIDALIKDLGKDATNARPLYSYDSQNITSSQYLLIDRQLPTDIPITEIAVKSDAVTPAH</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="137299" stop="137039"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>258</number_coding_nucleotides>
                  <number_encoded_amino_acids>86</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TDYFDKSKSHQLMRSIRKENINFQADTSTFQSNKQTSQQIPVDLDDMGGVAEDGGGFSGKNGEHHIVDNARDVDMDGVGVSVNEGE*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0284C08.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="137038" stop="137018"/>
                    <exon start="136816" stop="136694"/>
                    <exon start="136612" stop="136562"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IVSDNLKDGDAHQSHQELNEHIMDQAVDDNVHHNISHVLPEKTTTDSSRILQLQQQYRHQLKRQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 110 chains have been computed
$ 
$ memory statistics:
$ 194384 bytes spliced alignments in total
$ 34 spliced alignments have been stored
$ 5717 bytes was the average size of a spliced alignment
$ 25248 bytes predicted gene locations in total
$ 17 predicted gene locations have been stored
$ 1485 bytes was the average size of a predicted gene location
$ 5 megabytes was the average size of the backtrace matrix
$ 144 backtrace matrices have been allocated
$ 
$ date finished: 2008-02-20 08:00:28
-->
