<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-06 23:30:11"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E369112" ref_strand="+" ref_description="SGN-E369112 [TUS-23-I16]">
      <seq>tagggtcactacagcaagattatccttcctcaccttccgaccaactgattattgtagtatgcctttcaacacgctgtgtttggaaaggaactgtttgtgagccacctcatatttctcgaataaaattttatgggattaccgatatgcctttgggacggtttttacgagaccggttgtttgatgagaattttaggtgtccctcatgtgaaatgcctccagaagcacatgttcgttgctatactcatcggcaaggcagcctcacaatttctgtaaagaagctacctgaatgtatcttgccaggagaacaggaaggaaagatatggatgtggcacagatgtctgcgatgtcctcgggacaatggtttccctcctccaaccaggagggtagtaatgtctaatgctgcttgggggttgtcatttgggaaatttttggaactcagtttttcaaatcatgcagcagcgagcagggttgcaagttgtggtcatcttctttaccgggactgtctccggttctatgggtttgggaaaatggtagcttgttttcgatattctcctgttcatgtttattctgtctttcttccaccttcaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="16078" stop="20075"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16378" g_stop="16562" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="185" r_length="185" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16563" i_stop="16661" i_length="99">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.913" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16662" g_stop="16993" g_length="332"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="517" r_length="332" r_score="0.997"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16994" i_stop="19702" i_length="2709">
            <donor d_prob="0.569" d_score="0.98"/>
            <acceptor a_prob="0.915" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19703" g_stop="19775" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="518" r_stop="590" r_length="73" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E369112" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>590</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E369112" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16378" e_stop="16562"/>
          <exon e_start="16662" e_stop="16993"/>
          <exon e_start="19703" e_stop="19775"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGGGTCACTACAGCAAGATTATCCTTCCTCACCTTCCGACCAACTGATTATTGTAGTATGCCTTTCAACACGCTGTGTTTGGAAAGGAACTGTTTGTGAGCCACCTCATATTTCTCGAATAAAATTTTATGGGATTACCGATATGCCTTTGGGACGGTTTTTACGAGACCGGTTGTTTGATGAGGTAATGTCTCTCTTCCTCTTTTAAAGTTGCAGTGGATATATTCTATGCATGCATGGTTTATTCTTGTCTTTTTTCTGATATATGTAATACATTCACCAGAATTTTAGGTGTCCCTCATGTGAAATGCCTCCAGAAGCACATGTTCGTTGCTATACTCATCGGCAAGGCAGCCTCACAATTTCTGTAAAGAAGCTACCTGAATGTATCTTGCCAGGAGAACAGGAAGGAAAGATATGGATGTGGCACAGATGTCTGCGATGTCCTCGGGACAATGGTTTCCCTCCTCCAACCAGGAGGGTAGTAATGTCTAATGCTGCTTGGGGGTTGTCATTTGGGAAATTTTTGGAACTCAGTTTTTCAAATCATGCAGCAGCGAGCAGGGTTGCAAGTTGTGGTCATCTTCTTCACCGGGACTGTCTCCGGTTCTATGGGTATGCTGTTTCCAGTAAGGCATTTGTACGCATCATCTTTCTACACTGGGATTGCAATGCTTTCACCTATTTGGATGAGTGCTCTTTTTCTTTAATCAGCTACCTAATATCATGTAAAGTATGTAGAGAGACAGAAACCCGTTGCATTAGTAAAATTATCATAAAAGCCTCAGACGCATTTCCTGTATAATGGTTAAAGTTGGTATCAGCAAGCAAGTACGTTATTTCAAATAGACAGTTTCACATAAACTTGTGGAAACATTACCTTCTAAGTTGTTAAAGTAGGCGCCTAACCCCACTTCATGTGAAAATTTTCTAACTTGAATTGACTAATATAGACTTGCTGATAACAGCTACTAATGACAAACTCCTCAGTGACATTAGGTCATAGGTTGGATCATTTTGTTTACCAGTGTTTTGTCTGGTTGAGCCGTTGAGGTTCTTAATATTGCATGGATCCTCAGCTTTTAGTTGTTTGCATGAATACTATGATGATGTTGCTCATCAGCATGTATCAACTATCCTGACTGTTTTATATTAAGATTTACTGAACGCTCCAAGGCAGGTCTCCCAAAAACTCTCTCCCCTACTTCTTAGGAGTGTAAAACGTCTTTTCCAGTGGTTTTCAACTGGGAAAACCTTTCTTTTTCTTCTAATCTTAAGTCATCACCTTCTGTGATAGCTTTCAACCTTTTCTTTCTTCATTTTCAGAGATGGGGGATAATATTATTTACTTTAATGCTGGTTTTAAATCCTCCGACATTACTAGATGGACTGCTGGAACACCATTTGTTTTGTATGGGTGAAGAGAAGCTGTTATAATGAGAAGTCCTGCATTAGCAGTAAGATCATGGAATGAATATGCTCTGTCCTTAAAGAGTCCTTGACAGATCAGAAGAATGTGGTAAGGAGATGGAAAACCATAGACCAGGGCCCAGAACATTTTTTGCACCAGAAAATCTAACGAACGAGGGAGATATATGAATATCTTATCCTTAAATGGTGGTGGGAGATCTGTCATTAGTATCCCGGAAACAGTTTATAATGCTGGTTGGTGTGATATTGCATTTAAGGTAGAAAGATTTATTAAATGATCTCCAAAGTTGGATGAAGTGGAGGCTTGGCCCTCTTGAGTCTTGTGTGTTTAGAAGGTACCACCTAAACTTAAAGGCAAGTTTTAAGAAGAAGTGGTTAGACTGGCGTTATTGTATGGGCAGAGTGTTGGCCAGTCTAGAACTCCGATGTATTGAAGATGCAAGTCTCGGGAATGAGGTTTGAGATGGGTGTTGGGCACACTAGGAGAGATAAAATTAGAAATGAGGTTACTTCTTGACAAGGTGGGAGTGGCCTCTATGGTGGACAAGATGCGAAGCAAGACCAAGATGGTGAGGAGATGTGTAGATGCCCAATGAAAAGGTGTAAGAGGTTGGTCATAGTGAGTATGAGGAGAGAGAGGTAGACCGAAAAATTATTGGGGAGAGGTGATTAGACGGGACATGGTGCAACTCCAGATTACCGAGGATGACCTTAGATAGGAGGGTGTGAAGGTCGGGTACAGAAGGCTAGTAGGTATGGAGTGTCGTCTTTTTTTTGAGGTGTTTAGCCGTTTTCTTATAGCGTCTTGCTTTTGATTCCACCATCACTTGTTGATTGTGTTTAGGTTATCCCATTATTTTGTGGTTGTTACTGTTTTCTTATTAGTTGCTTTGTTTCTCCACTGTTGTTTTCCCTTTTTCATTATTCGGATATGTTCTACTCGAGCCGAGGGTCCTTCAGGAACAGTATTCTTACCTCCATTAGGTAGGGTTATGGTCTGGGTACACTCTATTCTCCCCAGACACCACTTGTGGGATTTCACTGTGTGGTGTTATTGTTAGGTTCTACATAGAGGTAGATCAGTTTTGTTTCTCGAGTACACTTGTAAAATGTGGTTTCAGTACCGCCCATGTGCTGTTTTCCCCACTTTTATATGTTTTTATATATTGGGTTTACTGATTTATTTTTGCTTGTTCCAAATGTTTCTGTGACCTAGAATTTACAATTTGAACTTCTTGTATTGCTCTATGGGAGAGCTTGTGATGCTACTTCTTATTGCGGTCTGTTGACTACATCATTTTATCAGTATAGATATGGAGTCCCTGCTAGGAAAAGGGAACTTCTGTTAATAAGAGAGAACACTACAACAAGAGAATGCTTCCAGAAATCTTGACAAAATGGATAAGTTGCATCACATCGTATAAAAGGCTTATAAGTTGCATCACATAGTGGAAAGGCTTAGAGAAACTGGATATTTTCCTATCGCTTGAACCCTTTCACTGGAGAACTCAAGGGGGAAAAATTCTTCAACATAGTCACTAGAAGGTGGTCTACGACCATTAGATCCCTAGAAAGAGGAGTAACTAAGAAGAGAGAGATATAAAAGAAGGAAAGGAATATCAGGAAAATCTTACAGGTGTATGGTTTTCTTGTCATTTTTGTTACTGTTCCATTTCTAGTTTTTTAATGGTGACTTCCCCATATTCTGGGTTAATAGTCTCAGTCGGTGTTGTGTTATCTTGTGCTCGATTCTGGTTATGGTGCATGTGTAGCAGGTGTTCCGTTCTAATCTTTCTTAGATTTATTCATTTGATGGTCCCACAAAGTATTTATTTCCCTTTCTTGTTGCTGAAACAATGCTTTTCTGCACCTCATCTTTGGTTGTTGCCACAGGTTTGGGAAAATGGTAGCTTGTTTTCGATATGCTCCTGTTCATGTTTATTCTGTCTTTCTCCCACCTCCAAAA</genome_strand>
        <mrna_strand>TAGGGTCACTACAGCAAGATTATCCTTCCTCACCTTCCGACCAACTGATTATTGTAGTATGCCTTTCAACACGCTGTGTTTGGAAAGGAACTGTTTGTGAGCCACCTCATATTTCTCGAATAAAATTTTATGGGATTACCGATATGCCTTTGGGACGGTTTTTACGAGACCGGTTGTTTGATGAG...................................................................................................AATTTTAGGTGTCCCTCATGTGAAATGCCTCCAGAAGCACATGTTCGTTGCTATACTCATCGGCAAGGCAGCCTCACAATTTCTGTAAAGAAGCTACCTGAATGTATCTTGCCAGGAGAACAGGAAGGAAAGATATGGATGTGGCACAGATGTCTGCGATGTCCTCGGGACAATGGTTTCCCTCCTCCAACCAGGAGGGTAGTAATGTCTAATGCTGCTTGGGGGTTGTCATTTGGGAAATTTTTGGAACTCAGTTTTTCAAATCATGCAGCAGCGAGCAGGGTTGCAAGTTGTGGTCATCTTCTTTACCGGGACTGTCTCCGGTTCTATGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGGAAAATGGTAGCTTGTTTTCGATATTCTCCTGTTCATGTTTATTCTGTCTTTCTTCCACCTTCAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E246289" ref_strand="+" ref_description="SGN-E246289 [cLEF-40-B19]">
      <seq>tagggtcactacagcaagattatccttcctcaccttccgaccaactgattattgtagtatgcctttcaacacgctgtgtttggaaaggaactgtttgtgagccacctcatatttctcgaataaaattttatgggattaccgatatgcctttgggacggtttttacgagaccggttgtttgatgagaattttaggtgtccctcatgtgaaatgcctccagaagcacatgttcgttgctatactcatcggcaaggcagcctcacaatttctgtaaagaagctacctgaatgtatcttgccaggagaacaggaaggaaagatatggatgtggcacagatgtctgcgatgtcctcgggacaatggtttccctcctccaaccaggagggtagtaatgtctaatgctgcttgggggttgtcatttgggaaatttttggaactcagtttttcaaatcatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="16078" stop="17230"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16378" g_stop="16562" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="185" r_length="185" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16563" i_stop="16661" i_length="99">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.913" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16662" g_stop="16930" g_length="269"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="454" r_length="269" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E246289" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>454</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E246289" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16378" e_stop="16562"/>
          <exon e_start="16662" e_stop="16930"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGGGTCACTACAGCAAGATTATCCTTCCTCACCTTCCGACCAACTGATTATTGTAGTATGCCTTTCAACACGCTGTGTTTGGAAAGGAACTGTTTGTGAGCCACCTCATATTTCTCGAATAAAATTTTATGGGATTACCGATATGCCTTTGGGACGGTTTTTACGAGACCGGTTGTTTGATGAGGTAATGTCTCTCTTCCTCTTTTAAAGTTGCAGTGGATATATTCTATGCATGCATGGTTTATTCTTGTCTTTTTTCTGATATATGTAATACATTCACCAGAATTTTAGGTGTCCCTCATGTGAAATGCCTCCAGAAGCACATGTTCGTTGCTATACTCATCGGCAAGGCAGCCTCACAATTTCTGTAAAGAAGCTACCTGAATGTATCTTGCCAGGAGAACAGGAAGGAAAGATATGGATGTGGCACAGATGTCTGCGATGTCCTCGGGACAATGGTTTCCCTCCTCCAACCAGGAGGGTAGTAATGTCTAATGCTGCTTGGGGGTTGTCATTTGGGAAATTTTTGGAACTCAGTTTTTCAAATCATGC</genome_strand>
        <mrna_strand>TAGGGTCACTACAGCAAGATTATCCTTCCTCACCTTCCGACCAACTGATTATTGTAGTATGCCTTTCAACACGCTGTGTTTGGAAAGGAACTGTTTGTGAGCCACCTCATATTTCTCGAATAAAATTTTATGGGATTACCGATATGCCTTTGGGACGGTTTTTACGAGACCGGTTGTTTGATGAG...................................................................................................AATTTTAGGTGTCCCTCATGTGAAATGCCTCCAGAAGCACATGTTCGTTGCTATACTCATCGGCAAGGCAGCCTCACAATTTCTGTAAAGAAGCTACCTGAATGTATCTTGCCAGGAGAACAGGAAGGAAAGATATGGATGTGGCACAGATGTCTGCGATGTCCTCGGGACAATGGTTTCCCTCCTCCAACCAGGAGGGTAGTAATGTCTAATGCTGCTTGGGGGTTGTCATTTGGGAAATTTTTGGAACTCAGTTTTTCAAATCATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E703519" ref_strand="+" ref_description="SGN-E703519 [FA21CH10]">
      <seq>gtcctcgggacaatggtttccctcctccaaccaggagggtagtaatgtctaatgctgcttgggggttgtcatttgggaaatttttggaactcagtttttcaaatcatgcagcagcgagcagggttgcaagttgtggtcatcttcttcaccgggactgtctccggttctatgggtttgggaaaatggtagcttgttttcgatatgctcctgttcatgtttattctgtctttctcccacctccaaaactcgaatttagctatgataatcaggagtggattcagaaagaaggtgatgaggtgcgcagaagggctaatgcgttgtttgctgaggtgtccaaagttcttcatgtcaagttggaaaaattctctgttgatagcagcttgaaagcacccaagacaagtgagcagatcacagagatggaagaaatattagagaaggagaaaactgagtttgagggattattacgcaaggcacttagcagggagatcaaagttggtcagcctacagttgacatccttgagataaatcaactgagaaggcagttggtttttcatgcttatctatgggacagacgtttgatacatctttccagttctcatggtaaaaattcccgaactccgggcagtttgacacaactgaaggagaaacccctcagctctagtgaggaacttcctgaaaggactgcaattttgagacctggaaaaaatttggggagctatgattcacctcttcagaatgtgaagactgaaataacatctagtgaaagaagacatggtcagattcctgatggggttcacgaaagattgactactga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="16522" stop="21858"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16822" g_stop="16993" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="172" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16994" i_stop="19702" i_length="2709">
            <donor d_prob="0.569" d_score="1.00"/>
            <acceptor a_prob="0.915" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19703" g_stop="19826" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="296" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19827" i_stop="19911" i_length="85">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.672" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19912" g_stop="20070" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="455" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="20071" i_stop="21199" i_length="1129">
            <donor d_prob="0.758" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="21200" g_stop="21558" g_length="359"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="814" r_length="359" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E703519" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>814</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E703519" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16822" e_stop="16993"/>
          <exon e_start="19703" e_stop="19826"/>
          <exon e_start="19912" e_stop="20070"/>
          <exon e_start="21200" e_stop="21558"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCCTCGGGACAATGGTTTCCCTCCTCCAACCAGGAGGGTAGTAATGTCTAATGCTGCTTGGGGGTTGTCATTTGGGAAATTTTTGGAACTCAGTTTTTCAAATCATGCAGCAGCGAGCAGGGTTGCAAGTTGTGGTCATCTTCTTCACCGGGACTGTCTCCGGTTCTATGGGTATGCTGTTTCCAGTAAGGCATTTGTACGCATCATCTTTCTACACTGGGATTGCAATGCTTTCACCTATTTGGATGAGTGCTCTTTTTCTTTAATCAGCTACCTAATATCATGTAAAGTATGTAGAGAGACAGAAACCCGTTGCATTAGTAAAATTATCATAAAAGCCTCAGACGCATTTCCTGTATAATGGTTAAAGTTGGTATCAGCAAGCAAGTACGTTATTTCAAATAGACAGTTTCACATAAACTTGTGGAAACATTACCTTCTAAGTTGTTAAAGTAGGCGCCTAACCCCACTTCATGTGAAAATTTTCTAACTTGAATTGACTAATATAGACTTGCTGATAACAGCTACTAATGACAAACTCCTCAGTGACATTAGGTCATAGGTTGGATCATTTTGTTTACCAGTGTTTTGTCTGGTTGAGCCGTTGAGGTTCTTAATATTGCATGGATCCTCAGCTTTTAGTTGTTTGCATGAATACTATGATGATGTTGCTCATCAGCATGTATCAACTATCCTGACTGTTTTATATTAAGATTTACTGAACGCTCCAAGGCAGGTCTCCCAAAAACTCTCTCCCCTACTTCTTAGGAGTGTAAAACGTCTTTTCCAGTGGTTTTCAACTGGGAAAACCTTTCTTTTTCTTCTAATCTTAAGTCATCACCTTCTGTGATAGCTTTCAACCTTTTCTTTCTTCATTTTCAGAGATGGGGGATAATATTATTTACTTTAATGCTGGTTTTAAATCCTCCGACATTACTAGATGGACTGCTGGAACACCATTTGTTTTGTATGGGTGAAGAGAAGCTGTTATAATGAGAAGTCCTGCATTAGCAGTAAGATCATGGAATGAATATGCTCTGTCCTTAAAGAGTCCTTGACAGATCAGAAGAATGTGGTAAGGAGATGGAAAACCATAGACCAGGGCCCAGAACATTTTTTGCACCAGAAAATCTAACGAACGAGGGAGATATATGAATATCTTATCCTTAAATGGTGGTGGGAGATCTGTCATTAGTATCCCGGAAACAGTTTATAATGCTGGTTGGTGTGATATTGCATTTAAGGTAGAAAGATTTATTAAATGATCTCCAAAGTTGGATGAAGTGGAGGCTTGGCCCTCTTGAGTCTTGTGTGTTTAGAAGGTACCACCTAAACTTAAAGGCAAGTTTTAAGAAGAAGTGGTTAGACTGGCGTTATTGTATGGGCAGAGTGTTGGCCAGTCTAGAACTCCGATGTATTGAAGATGCAAGTCTCGGGAATGAGGTTTGAGATGGGTGTTGGGCACACTAGGAGAGATAAAATTAGAAATGAGGTTACTTCTTGACAAGGTGGGAGTGGCCTCTATGGTGGACAAGATGCGAAGCAAGACCAAGATGGTGAGGAGATGTGTAGATGCCCAATGAAAAGGTGTAAGAGGTTGGTCATAGTGAGTATGAGGAGAGAGAGGTAGACCGAAAAATTATTGGGGAGAGGTGATTAGACGGGACATGGTGCAACTCCAGATTACCGAGGATGACCTTAGATAGGAGGGTGTGAAGGTCGGGTACAGAAGGCTAGTAGGTATGGAGTGTCGTCTTTTTTTTGAGGTGTTTAGCCGTTTTCTTATAGCGTCTTGCTTTTGATTCCACCATCACTTGTTGATTGTGTTTAGGTTATCCCATTATTTTGTGGTTGTTACTGTTTTCTTATTAGTTGCTTTGTTTCTCCACTGTTGTTTTCCCTTTTTCATTATTCGGATATGTTCTACTCGAGCCGAGGGTCCTTCAGGAACAGTATTCTTACCTCCATTAGGTAGGGTTATGGTCTGGGTACACTCTATTCTCCCCAGACACCACTTGTGGGATTTCACTGTGTGGTGTTATTGTTAGGTTCTACATAGAGGTAGATCAGTTTTGTTTCTCGAGTACACTTGTAAAATGTGGTTTCAGTACCGCCCATGTGCTGTTTTCCCCACTTTTATATGTTTTTATATATTGGGTTTACTGATTTATTTTTGCTTGTTCCAAATGTTTCTGTGACCTAGAATTTACAATTTGAACTTCTTGTATTGCTCTATGGGAGAGCTTGTGATGCTACTTCTTATTGCGGTCTGTTGACTACATCATTTTATCAGTATAGATATGGAGTCCCTGCTAGGAAAAGGGAACTTCTGTTAATAAGAGAGAACACTACAACAAGAGAATGCTTCCAGAAATCTTGACAAAATGGATAAGTTGCATCACATCGTATAAAAGGCTTATAAGTTGCATCACATAGTGGAAAGGCTTAGAGAAACTGGATATTTTCCTATCGCTTGAACCCTTTCACTGGAGAACTCAAGGGGGAAAAATTCTTCAACATAGTCACTAGAAGGTGGTCTACGACCATTAGATCCCTAGAAAGAGGAGTAACTAAGAAGAGAGAGATATAAAAGAAGGAAAGGAATATCAGGAAAATCTTACAGGTGTATGGTTTTCTTGTCATTTTTGTTACTGTTCCATTTCTAGTTTTTTAATGGTGACTTCCCCATATTCTGGGTTAATAGTCTCAGTCGGTGTTGTGTTATCTTGTGCTCGATTCTGGTTATGGTGCATGTGTAGCAGGTGTTCCGTTCTAATCTTTCTTAGATTTATTCATTTGATGGTCCCACAAAGTATTTATTTCCCTTTCTTGTTGCTGAAACAATGCTTTTCTGCACCTCATCTTTGGTTGTTGCCACAGGTTTGGGAAAATGGTAGCTTGTTTTCGATATGCTCCTGTTCATGTTTATTCTGTCTTTCTCCCACCTCCAAAACTCGAATTTAGCTATGATAATCAGGAGTGGATTCAGAAAGAAGGTGATGAGGTACAATTGGATTAAATTCTTGCGTTAGTTTTGATACTTCTATGTTTTGCTTTTTTCCTGATGTGTTTGTCTCCTGCAAGAGAAGGTGCGCAGAAGGGCTAATGCGTTGTTTGCTGAGGTGTCCAAAGTTCTTCATGTCAAGTTGGAAAAATTCTCTGTTGATAGCAGCTTGAAAGCACCCAAGACAAGTGAGCAGATCACAGAGATGGAAGAAATATTAGAGAAGGAGAAAACTGAGTTTGAGGTGGTTTCTTGTTTTTTCTTTCCTGTTGTTGAGATACTAAGTCATAACATCTGCATTGTCAGTGATGTATGAACAAATTTGTCAATCTGGTCTATTGAAAATGTAGCGATTAGTGACCTGTTTGAAGTTCAACTATTTGAGAGATGATTTCCAAAGTAATATCTCTCTTCTTTGGTGTGGATAACATGTTCCAAACCTTTTTAACTTTTTTAAACAACTTGAGAGTTTTAGTATGATTTGTGAGAAAATTCAGAGGCATGTTCCATCATTCTAAGATATGTGAAAATCAATGCAGCAGCAAGTTTGAGAAGAAAGAAATGATCAGGGTTCTCTGTAAGAATTAGCAGTAAAAAAAAGAATATAAGAGGAGTCAACAGAGGAAAACAACTGATTGAAGAGAGACTACAGTCCCAAGATGAACATGTATCCTAGGTCCTTTTGGTTCTAACAGAGAAAGGGTCTTTGGTTTGACTAGTCATCAAACCAGAAGTTGGGTTTCTTCCATTATAAATGTGTAATATAGAATCCTTCCTTTTGATGGGTCACCTCAGGAAGAAAGCGTTTTAATCTTTGAGTAATTGAGACCATACCCCATATAACTGTTAGGTCTAGGTCCTCAACCTTACCACCTTCCTCTGGGGCAATTAGGAACTCCCTCAACTGGAGGACTGTTCCTCAGAGCTGCACTTCAATTGCTGCTGTTTCTCTCAGTAGATGTACAGCTGTTGGGAACTTCAGTGTAAAGGGCATTATAACTCAAAATACATCTATTTCTTCTAATTAAAAGTCTGTTTGGTGGTAATTTTTCATTTAAGGCATGACCTCAAGTTTCCTTCTGAACAACAACTGCACCCCTGGGGATGAGTGGTTGCTCAATACCATCCCCTCTCTAGTCACAGCAGAAGATAATCAGTTTCTTACGGGCCCTCCTAATACGGAATAGTTCAAAAGTTAATTTTTAGCATGTGGGCACGCACTAACCCCCAAAAAGGTCCTCCCCATAGCCTTTAAAGCCTTATTTAGGGTAGATTCTTTTATTTCCTCTGTTCACCCTTTTCATTTTCTTTTGGGTAAGGTAGCAATGTAGCTCCAAATGACTTATTTCTTACTGGTGTTTTCATTGTTCTAGGGATTATTACGCAAGGCACTTAGCAGGGAGATCAAAGTTGGTCAGCCTACAGTTGACATCCTTGAGATAAATCAACTGAGAAGGCAGTTGGTTTTTCATGCTTATCTATGGGACAGACGTTTGATACATCTTTCCAGTTCTCATGGTAAAAATTCCCGAACTCCGGGCAGTTTGACACAACTGAAGGAGAAACCCCTCAGCTCTAGTGAGGAACTTCCTGAAAGGACTGCAATTTTGAGACCTGGAAAAAGTTTGGGGAGCTATGATTCAGCTCTTCAGAATGTGAAGACTGAAATAACATCTAGTGAAGGAAGACATGGTCAGATTCCTGATGGGGTTCACGAAAGATTGACTACTGA</genome_strand>
        <mrna_strand>GTCCTCGGGACAATGGTTTCCCTCCTCCAACCAGGAGGGTAGTAATGTCTAATGCTGCTTGGGGGTTGTCATTTGGGAAATTTTTGGAACTCAGTTTTTCAAATCATGCAGCAGCGAGCAGGGTTGCAAGTTGTGGTCATCTTCTTCACCGGGACTGTCTCCGGTTCTATGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGGAAAATGGTAGCTTGTTTTCGATATGCTCCTGTTCATGTTTATTCTGTCTTTCTCCCACCTCCAAAACTCGAATTTAGCTATGATAATCAGGAGTGGATTCAGAAAGAAGGTGATGAG.....................................................................................GTGCGCAGAAGGGCTAATGCGTTGTTTGCTGAGGTGTCCAAAGTTCTTCATGTCAAGTTGGAAAAATTCTCTGTTGATAGCAGCTTGAAAGCACCCAAGACAAGTGAGCAGATCACAGAGATGGAAGAAATATTAGAGAAGGAGAAAACTGAGTTTGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATTATTACGCAAGGCACTTAGCAGGGAGATCAAAGTTGGTCAGCCTACAGTTGACATCCTTGAGATAAATCAACTGAGAAGGCAGTTGGTTTTTCATGCTTATCTATGGGACAGACGTTTGATACATCTTTCCAGTTCTCATGGTAAAAATTCCCGAACTCCGGGCAGTTTGACACAACTGAAGGAGAAACCCCTCAGCTCTAGTGAGGAACTTCCTGAAAGGACTGCAATTTTGAGACCTGGAAAAAATTTGGGGAGCTATGATTCACCTCTTCAGAATGTGAAGACTGAAATAACATCTAGTGAAAGAAGACATGGTCAGATTCCTGATGGGGTTCACGAAAGATTGACTACTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E701704" ref_strand="+" ref_description="SGN-E701704 [FA16CH03]">
      <seq>atttgggaaatttttggaactcagtttttcaaatcatgcagcagcgagcagggttgcaagttgtggtcatcttcttcaccgggactgtctccggttctatgggtttgggaaaatggtagcttgttttcgatatgctcctgttcatgtttattctgtctttctcccacctccaaaactcgaatttagctatgataatcaggagtggattcagaaagaaggtgatgaggtgcgcagaagggctaatgcgttgtttgctgaggtgtccaaagttcttcatgtcaagttggaaaaattctctgttgatagcagcttgaaagcacccaagacaagtgagcagatcacagagatggaagaaatattagagaaggagaaaactgagtttgagggattattacgcaaggcacttagcagggagatcaaagttggtcagcctacagttgacatccttgagataaatcaactgagaaggcagttggtttttcatgcttatctatgggacagacgtttgatacatctttccagttctcatggtaaaaattcccgaactccgggcagtttgacacaactgaaggagaaacccctcagctctagtgaggaacttcctgaaaggactgcaattttgagacctggaaaaagtttggggagctatgattcagctcttcagaatgtgaagactgaaataacatctagtgaaggaagacatggtcagattcctgatggggttcacgaaagattgactactgatgagaacctaactcaccggaaagactgcgaaattttctgtgctatagaaatacaggagatggtaatgtactggaacctgaaaaaaatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="16592" stop="21948"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16892" g_stop="16993" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="102" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16994" i_stop="19702" i_length="2709">
            <donor d_prob="0.569" d_score="1.00"/>
            <acceptor a_prob="0.915" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19703" g_stop="19826" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="103" r_stop="226" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19827" i_stop="19911" i_length="85">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.672" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19912" g_stop="20070" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="385" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="20071" i_stop="21199" i_length="1129">
            <donor d_prob="0.758" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="21200" g_stop="21648" g_length="449"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="833" r_length="448" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E701704" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>834</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E701704" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16892" e_stop="16993"/>
          <exon e_start="19703" e_stop="19826"/>
          <exon e_start="19912" e_stop="20070"/>
          <exon e_start="21200" e_stop="21648"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTGGGAAATTTTTGGAACTCAGTTTTTCAAATCATGCAGCAGCGAGCAGGGTTGCAAGTTGTGGTCATCTTCTTCACCGGGACTGTCTCCGGTTCTATGGGTATGCTGTTTCCAGTAAGGCATTTGTACGCATCATCTTTCTACACTGGGATTGCAATGCTTTCACCTATTTGGATGAGTGCTCTTTTTCTTTAATCAGCTACCTAATATCATGTAAAGTATGTAGAGAGACAGAAACCCGTTGCATTAGTAAAATTATCATAAAAGCCTCAGACGCATTTCCTGTATAATGGTTAAAGTTGGTATCAGCAAGCAAGTACGTTATTTCAAATAGACAGTTTCACATAAACTTGTGGAAACATTACCTTCTAAGTTGTTAAAGTAGGCGCCTAACCCCACTTCATGTGAAAATTTTCTAACTTGAATTGACTAATATAGACTTGCTGATAACAGCTACTAATGACAAACTCCTCAGTGACATTAGGTCATAGGTTGGATCATTTTGTTTACCAGTGTTTTGTCTGGTTGAGCCGTTGAGGTTCTTAATATTGCATGGATCCTCAGCTTTTAGTTGTTTGCATGAATACTATGATGATGTTGCTCATCAGCATGTATCAACTATCCTGACTGTTTTATATTAAGATTTACTGAACGCTCCAAGGCAGGTCTCCCAAAAACTCTCTCCCCTACTTCTTAGGAGTGTAAAACGTCTTTTCCAGTGGTTTTCAACTGGGAAAACCTTTCTTTTTCTTCTAATCTTAAGTCATCACCTTCTGTGATAGCTTTCAACCTTTTCTTTCTTCATTTTCAGAGATGGGGGATAATATTATTTACTTTAATGCTGGTTTTAAATCCTCCGACATTACTAGATGGACTGCTGGAACACCATTTGTTTTGTATGGGTGAAGAGAAGCTGTTATAATGAGAAGTCCTGCATTAGCAGTAAGATCATGGAATGAATATGCTCTGTCCTTAAAGAGTCCTTGACAGATCAGAAGAATGTGGTAAGGAGATGGAAAACCATAGACCAGGGCCCAGAACATTTTTTGCACCAGAAAATCTAACGAACGAGGGAGATATATGAATATCTTATCCTTAAATGGTGGTGGGAGATCTGTCATTAGTATCCCGGAAACAGTTTATAATGCTGGTTGGTGTGATATTGCATTTAAGGTAGAAAGATTTATTAAATGATCTCCAAAGTTGGATGAAGTGGAGGCTTGGCCCTCTTGAGTCTTGTGTGTTTAGAAGGTACCACCTAAACTTAAAGGCAAGTTTTAAGAAGAAGTGGTTAGACTGGCGTTATTGTATGGGCAGAGTGTTGGCCAGTCTAGAACTCCGATGTATTGAAGATGCAAGTCTCGGGAATGAGGTTTGAGATGGGTGTTGGGCACACTAGGAGAGATAAAATTAGAAATGAGGTTACTTCTTGACAAGGTGGGAGTGGCCTCTATGGTGGACAAGATGCGAAGCAAGACCAAGATGGTGAGGAGATGTGTAGATGCCCAATGAAAAGGTGTAAGAGGTTGGTCATAGTGAGTATGAGGAGAGAGAGGTAGACCGAAAAATTATTGGGGAGAGGTGATTAGACGGGACATGGTGCAACTCCAGATTACCGAGGATGACCTTAGATAGGAGGGTGTGAAGGTCGGGTACAGAAGGCTAGTAGGTATGGAGTGTCGTCTTTTTTTTGAGGTGTTTAGCCGTTTTCTTATAGCGTCTTGCTTTTGATTCCACCATCACTTGTTGATTGTGTTTAGGTTATCCCATTATTTTGTGGTTGTTACTGTTTTCTTATTAGTTGCTTTGTTTCTCCACTGTTGTTTTCCCTTTTTCATTATTCGGATATGTTCTACTCGAGCCGAGGGTCCTTCAGGAACAGTATTCTTACCTCCATTAGGTAGGGTTATGGTCTGGGTACACTCTATTCTCCCCAGACACCACTTGTGGGATTTCACTGTGTGGTGTTATTGTTAGGTTCTACATAGAGGTAGATCAGTTTTGTTTCTCGAGTACACTTGTAAAATGTGGTTTCAGTACCGCCCATGTGCTGTTTTCCCCACTTTTATATGTTTTTATATATTGGGTTTACTGATTTATTTTTGCTTGTTCCAAATGTTTCTGTGACCTAGAATTTACAATTTGAACTTCTTGTATTGCTCTATGGGAGAGCTTGTGATGCTACTTCTTATTGCGGTCTGTTGACTACATCATTTTATCAGTATAGATATGGAGTCCCTGCTAGGAAAAGGGAACTTCTGTTAATAAGAGAGAACACTACAACAAGAGAATGCTTCCAGAAATCTTGACAAAATGGATAAGTTGCATCACATCGTATAAAAGGCTTATAAGTTGCATCACATAGTGGAAAGGCTTAGAGAAACTGGATATTTTCCTATCGCTTGAACCCTTTCACTGGAGAACTCAAGGGGGAAAAATTCTTCAACATAGTCACTAGAAGGTGGTCTACGACCATTAGATCCCTAGAAAGAGGAGTAACTAAGAAGAGAGAGATATAAAAGAAGGAAAGGAATATCAGGAAAATCTTACAGGTGTATGGTTTTCTTGTCATTTTTGTTACTGTTCCATTTCTAGTTTTTTAATGGTGACTTCCCCATATTCTGGGTTAATAGTCTCAGTCGGTGTTGTGTTATCTTGTGCTCGATTCTGGTTATGGTGCATGTGTAGCAGGTGTTCCGTTCTAATCTTTCTTAGATTTATTCATTTGATGGTCCCACAAAGTATTTATTTCCCTTTCTTGTTGCTGAAACAATGCTTTTCTGCACCTCATCTTTGGTTGTTGCCACAGGTTTGGGAAAATGGTAGCTTGTTTTCGATATGCTCCTGTTCATGTTTATTCTGTCTTTCTCCCACCTCCAAAACTCGAATTTAGCTATGATAATCAGGAGTGGATTCAGAAAGAAGGTGATGAGGTACAATTGGATTAAATTCTTGCGTTAGTTTTGATACTTCTATGTTTTGCTTTTTTCCTGATGTGTTTGTCTCCTGCAAGAGAAGGTGCGCAGAAGGGCTAATGCGTTGTTTGCTGAGGTGTCCAAAGTTCTTCATGTCAAGTTGGAAAAATTCTCTGTTGATAGCAGCTTGAAAGCACCCAAGACAAGTGAGCAGATCACAGAGATGGAAGAAATATTAGAGAAGGAGAAAACTGAGTTTGAGGTGGTTTCTTGTTTTTTCTTTCCTGTTGTTGAGATACTAAGTCATAACATCTGCATTGTCAGTGATGTATGAACAAATTTGTCAATCTGGTCTATTGAAAATGTAGCGATTAGTGACCTGTTTGAAGTTCAACTATTTGAGAGATGATTTCCAAAGTAATATCTCTCTTCTTTGGTGTGGATAACATGTTCCAAACCTTTTTAACTTTTTTAAACAACTTGAGAGTTTTAGTATGATTTGTGAGAAAATTCAGAGGCATGTTCCATCATTCTAAGATATGTGAAAATCAATGCAGCAGCAAGTTTGAGAAGAAAGAAATGATCAGGGTTCTCTGTAAGAATTAGCAGTAAAAAAAAGAATATAAGAGGAGTCAACAGAGGAAAACAACTGATTGAAGAGAGACTACAGTCCCAAGATGAACATGTATCCTAGGTCCTTTTGGTTCTAACAGAGAAAGGGTCTTTGGTTTGACTAGTCATCAAACCAGAAGTTGGGTTTCTTCCATTATAAATGTGTAATATAGAATCCTTCCTTTTGATGGGTCACCTCAGGAAGAAAGCGTTTTAATCTTTGAGTAATTGAGACCATACCCCATATAACTGTTAGGTCTAGGTCCTCAACCTTACCACCTTCCTCTGGGGCAATTAGGAACTCCCTCAACTGGAGGACTGTTCCTCAGAGCTGCACTTCAATTGCTGCTGTTTCTCTCAGTAGATGTACAGCTGTTGGGAACTTCAGTGTAAAGGGCATTATAACTCAAAATACATCTATTTCTTCTAATTAAAAGTCTGTTTGGTGGTAATTTTTCATTTAAGGCATGACCTCAAGTTTCCTTCTGAACAACAACTGCACCCCTGGGGATGAGTGGTTGCTCAATACCATCCCCTCTCTAGTCACAGCAGAAGATAATCAGTTTCTTACGGGCCCTCCTAATACGGAATAGTTCAAAAGTTAATTTTTAGCATGTGGGCACGCACTAACCCCCAAAAAGGTCCTCCCCATAGCCTTTAAAGCCTTATTTAGGGTAGATTCTTTTATTTCCTCTGTTCACCCTTTTCATTTTCTTTTGGGTAAGGTAGCAATGTAGCTCCAAATGACTTATTTCTTACTGGTGTTTTCATTGTTCTAGGGATTATTACGCAAGGCACTTAGCAGGGAGATCAAAGTTGGTCAGCCTACAGTTGACATCCTTGAGATAAATCAACTGAGAAGGCAGTTGGTTTTTCATGCTTATCTATGGGACAGACGTTTGATACATCTTTCCAGTTCTCATGGTAAAAATTCCCGAACTCCGGGCAGTTTGACACAACTGAAGGAGAAACCCCTCAGCTCTAGTGAGGAACTTCCTGAAAGGACTGCAATTTTGAGACCTGGAAAAAGTTTGGGGAGCTATGATTCAGCTCTTCAGAATGTGAAGACTGAAATAACATCTAGTGAAGGAAGACATGGTCAGATTCCTGATGGGGTTCACGAAAGATTGACTACTGATGAGAACCTAACTCACGGGAAAGACTGCGAGATTTTCTGTGCTATAAGAAATACAGGAGATGGTAATGTACTGGAACCTGGAAAAAATGT</genome_strand>
        <mrna_strand>ATTTGGGAAATTTTTGGAACTCAGTTTTTCAAATCATGCAGCAGCGAGCAGGGTTGCAAGTTGTGGTCATCTTCTTCACCGGGACTGTCTCCGGTTCTATGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGGAAAATGGTAGCTTGTTTTCGATATGCTCCTGTTCATGTTTATTCTGTCTTTCTCCCACCTCCAAAACTCGAATTTAGCTATGATAATCAGGAGTGGATTCAGAAAGAAGGTGATGAG.....................................................................................GTGCGCAGAAGGGCTAATGCGTTGTTTGCTGAGGTGTCCAAAGTTCTTCATGTCAAGTTGGAAAAATTCTCTGTTGATAGCAGCTTGAAAGCACCCAAGACAAGTGAGCAGATCACAGAGATGGAAGAAATATTAGAGAAGGAGAAAACTGAGTTTGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATTATTACGCAAGGCACTTAGCAGGGAGATCAAAGTTGGTCAGCCTACAGTTGACATCCTTGAGATAAATCAACTGAGAAGGCAGTTGGTTTTTCATGCTTATCTATGGGACAGACGTTTGATACATCTTTCCAGTTCTCATGGTAAAAATTCCCGAACTCCGGGCAGTTTGACACAACTGAAGGAGAAACCCCTCAGCTCTAGTGAGGAACTTCCTGAAAGGACTGCAATTTTGAGACCTGGAAAAAGTTTGGGGAGCTATGATTCAGCTCTTCAGAATGTGAAGACTGAAATAACATCTAGTGAAGGAAGACATGGTCAGATTCCTGATGGGGTTCACGAAAGATTGACTACTGATGAGAACCTAACTCACCGGAAAGACTGCGAAATTTTCTGTGCTAT-AGAAATACAGGAGATGGTAATGTACTGGAACCTGAAAAAAATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E263582" ref_strand="+" ref_description="SGN-E263582 [cLEG-60-J19]">
      <seq>tggaactcagtttttcaaatcatgcagcagcgagcagggttgcaagttgtggtcatcttcttcaccgggactgtctccggttctatgggtttgggaaaatggtagcttgttttcgatatgctcctgttcatgtttattctgtctttctcccacctccaaaactcgaatttagctatgataatcaggagtggattcagaaagaaggtgatgaggtgcgcagaagggctaatgcgttgtttgctgaggtgtccaaagttcttcatgtcaagttggaaaaattctctgttgatagcagcttgaaagcacccaagacaagtgagcagatcacagagatggaagaaatattagagaaggagaaaactgagtttgagggattattacgcaaggcacttagcagggagatcaaagttggtcagcctacagttgacatccttgagataaatcaactgagaaggcagttggtttttcatgcttatctatgggacagacgtttgatacatctttccagttctcatggtaaaaattcccgaactccgggcagtttgacacaactgaaggagaaacccctcagctctagtgaggaacttcctgaaaggactgcaattttgagacctggaaaaagtttggggagctatgattcagctcttcagaatgtgaagactgaaataacatctagtngaggaagacatggtcagatttcctgatggggttcacgaaagattgactactgatgagaacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="16606" stop="21867"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16906" g_stop="16993" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="88" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16994" i_stop="19702" i_length="2709">
            <donor d_prob="0.569" d_score="1.00"/>
            <acceptor a_prob="0.915" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19703" g_stop="19826" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="212" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19827" i_stop="19911" i_length="85">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.672" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19912" g_stop="20070" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="213" r_stop="371" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="20071" i_stop="21199" i_length="1129">
            <donor d_prob="0.758" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="21200" g_stop="21567" g_length="368"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="740" r_length="369" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E263582" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>739</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E263582" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16906" e_stop="16993"/>
          <exon e_start="19703" e_stop="19826"/>
          <exon e_start="19912" e_stop="20070"/>
          <exon e_start="21200" e_stop="21567"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAACTCAGTTTTTCAAATCATGCAGCAGCGAGCAGGGTTGCAAGTTGTGGTCATCTTCTTCACCGGGACTGTCTCCGGTTCTATGGGTATGCTGTTTCCAGTAAGGCATTTGTACGCATCATCTTTCTACACTGGGATTGCAATGCTTTCACCTATTTGGATGAGTGCTCTTTTTCTTTAATCAGCTACCTAATATCATGTAAAGTATGTAGAGAGACAGAAACCCGTTGCATTAGTAAAATTATCATAAAAGCCTCAGACGCATTTCCTGTATAATGGTTAAAGTTGGTATCAGCAAGCAAGTACGTTATTTCAAATAGACAGTTTCACATAAACTTGTGGAAACATTACCTTCTAAGTTGTTAAAGTAGGCGCCTAACCCCACTTCATGTGAAAATTTTCTAACTTGAATTGACTAATATAGACTTGCTGATAACAGCTACTAATGACAAACTCCTCAGTGACATTAGGTCATAGGTTGGATCATTTTGTTTACCAGTGTTTTGTCTGGTTGAGCCGTTGAGGTTCTTAATATTGCATGGATCCTCAGCTTTTAGTTGTTTGCATGAATACTATGATGATGTTGCTCATCAGCATGTATCAACTATCCTGACTGTTTTATATTAAGATTTACTGAACGCTCCAAGGCAGGTCTCCCAAAAACTCTCTCCCCTACTTCTTAGGAGTGTAAAACGTCTTTTCCAGTGGTTTTCAACTGGGAAAACCTTTCTTTTTCTTCTAATCTTAAGTCATCACCTTCTGTGATAGCTTTCAACCTTTTCTTTCTTCATTTTCAGAGATGGGGGATAATATTATTTACTTTAATGCTGGTTTTAAATCCTCCGACATTACTAGATGGACTGCTGGAACACCATTTGTTTTGTATGGGTGAAGAGAAGCTGTTATAATGAGAAGTCCTGCATTAGCAGTAAGATCATGGAATGAATATGCTCTGTCCTTAAAGAGTCCTTGACAGATCAGAAGAATGTGGTAAGGAGATGGAAAACCATAGACCAGGGCCCAGAACATTTTTTGCACCAGAAAATCTAACGAACGAGGGAGATATATGAATATCTTATCCTTAAATGGTGGTGGGAGATCTGTCATTAGTATCCCGGAAACAGTTTATAATGCTGGTTGGTGTGATATTGCATTTAAGGTAGAAAGATTTATTAAATGATCTCCAAAGTTGGATGAAGTGGAGGCTTGGCCCTCTTGAGTCTTGTGTGTTTAGAAGGTACCACCTAAACTTAAAGGCAAGTTTTAAGAAGAAGTGGTTAGACTGGCGTTATTGTATGGGCAGAGTGTTGGCCAGTCTAGAACTCCGATGTATTGAAGATGCAAGTCTCGGGAATGAGGTTTGAGATGGGTGTTGGGCACACTAGGAGAGATAAAATTAGAAATGAGGTTACTTCTTGACAAGGTGGGAGTGGCCTCTATGGTGGACAAGATGCGAAGCAAGACCAAGATGGTGAGGAGATGTGTAGATGCCCAATGAAAAGGTGTAAGAGGTTGGTCATAGTGAGTATGAGGAGAGAGAGGTAGACCGAAAAATTATTGGGGAGAGGTGATTAGACGGGACATGGTGCAACTCCAGATTACCGAGGATGACCTTAGATAGGAGGGTGTGAAGGTCGGGTACAGAAGGCTAGTAGGTATGGAGTGTCGTCTTTTTTTTGAGGTGTTTAGCCGTTTTCTTATAGCGTCTTGCTTTTGATTCCACCATCACTTGTTGATTGTGTTTAGGTTATCCCATTATTTTGTGGTTGTTACTGTTTTCTTATTAGTTGCTTTGTTTCTCCACTGTTGTTTTCCCTTTTTCATTATTCGGATATGTTCTACTCGAGCCGAGGGTCCTTCAGGAACAGTATTCTTACCTCCATTAGGTAGGGTTATGGTCTGGGTACACTCTATTCTCCCCAGACACCACTTGTGGGATTTCACTGTGTGGTGTTATTGTTAGGTTCTACATAGAGGTAGATCAGTTTTGTTTCTCGAGTACACTTGTAAAATGTGGTTTCAGTACCGCCCATGTGCTGTTTTCCCCACTTTTATATGTTTTTATATATTGGGTTTACTGATTTATTTTTGCTTGTTCCAAATGTTTCTGTGACCTAGAATTTACAATTTGAACTTCTTGTATTGCTCTATGGGAGAGCTTGTGATGCTACTTCTTATTGCGGTCTGTTGACTACATCATTTTATCAGTATAGATATGGAGTCCCTGCTAGGAAAAGGGAACTTCTGTTAATAAGAGAGAACACTACAACAAGAGAATGCTTCCAGAAATCTTGACAAAATGGATAAGTTGCATCACATCGTATAAAAGGCTTATAAGTTGCATCACATAGTGGAAAGGCTTAGAGAAACTGGATATTTTCCTATCGCTTGAACCCTTTCACTGGAGAACTCAAGGGGGAAAAATTCTTCAACATAGTCACTAGAAGGTGGTCTACGACCATTAGATCCCTAGAAAGAGGAGTAACTAAGAAGAGAGAGATATAAAAGAAGGAAAGGAATATCAGGAAAATCTTACAGGTGTATGGTTTTCTTGTCATTTTTGTTACTGTTCCATTTCTAGTTTTTTAATGGTGACTTCCCCATATTCTGGGTTAATAGTCTCAGTCGGTGTTGTGTTATCTTGTGCTCGATTCTGGTTATGGTGCATGTGTAGCAGGTGTTCCGTTCTAATCTTTCTTAGATTTATTCATTTGATGGTCCCACAAAGTATTTATTTCCCTTTCTTGTTGCTGAAACAATGCTTTTCTGCACCTCATCTTTGGTTGTTGCCACAGGTTTGGGAAAATGGTAGCTTGTTTTCGATATGCTCCTGTTCATGTTTATTCTGTCTTTCTCCCACCTCCAAAACTCGAATTTAGCTATGATAATCAGGAGTGGATTCAGAAAGAAGGTGATGAGGTACAATTGGATTAAATTCTTGCGTTAGTTTTGATACTTCTATGTTTTGCTTTTTTCCTGATGTGTTTGTCTCCTGCAAGAGAAGGTGCGCAGAAGGGCTAATGCGTTGTTTGCTGAGGTGTCCAAAGTTCTTCATGTCAAGTTGGAAAAATTCTCTGTTGATAGCAGCTTGAAAGCACCCAAGACAAGTGAGCAGATCACAGAGATGGAAGAAATATTAGAGAAGGAGAAAACTGAGTTTGAGGTGGTTTCTTGTTTTTTCTTTCCTGTTGTTGAGATACTAAGTCATAACATCTGCATTGTCAGTGATGTATGAACAAATTTGTCAATCTGGTCTATTGAAAATGTAGCGATTAGTGACCTGTTTGAAGTTCAACTATTTGAGAGATGATTTCCAAAGTAATATCTCTCTTCTTTGGTGTGGATAACATGTTCCAAACCTTTTTAACTTTTTTAAACAACTTGAGAGTTTTAGTATGATTTGTGAGAAAATTCAGAGGCATGTTCCATCATTCTAAGATATGTGAAAATCAATGCAGCAGCAAGTTTGAGAAGAAAGAAATGATCAGGGTTCTCTGTAAGAATTAGCAGTAAAAAAAAGAATATAAGAGGAGTCAACAGAGGAAAACAACTGATTGAAGAGAGACTACAGTCCCAAGATGAACATGTATCCTAGGTCCTTTTGGTTCTAACAGAGAAAGGGTCTTTGGTTTGACTAGTCATCAAACCAGAAGTTGGGTTTCTTCCATTATAAATGTGTAATATAGAATCCTTCCTTTTGATGGGTCACCTCAGGAAGAAAGCGTTTTAATCTTTGAGTAATTGAGACCATACCCCATATAACTGTTAGGTCTAGGTCCTCAACCTTACCACCTTCCTCTGGGGCAATTAGGAACTCCCTCAACTGGAGGACTGTTCCTCAGAGCTGCACTTCAATTGCTGCTGTTTCTCTCAGTAGATGTACAGCTGTTGGGAACTTCAGTGTAAAGGGCATTATAACTCAAAATACATCTATTTCTTCTAATTAAAAGTCTGTTTGGTGGTAATTTTTCATTTAAGGCATGACCTCAAGTTTCCTTCTGAACAACAACTGCACCCCTGGGGATGAGTGGTTGCTCAATACCATCCCCTCTCTAGTCACAGCAGAAGATAATCAGTTTCTTACGGGCCCTCCTAATACGGAATAGTTCAAAAGTTAATTTTTAGCATGTGGGCACGCACTAACCCCCAAAAAGGTCCTCCCCATAGCCTTTAAAGCCTTATTTAGGGTAGATTCTTTTATTTCCTCTGTTCACCCTTTTCATTTTCTTTTGGGTAAGGTAGCAATGTAGCTCCAAATGACTTATTTCTTACTGGTGTTTTCATTGTTCTAGGGATTATTACGCAAGGCACTTAGCAGGGAGATCAAAGTTGGTCAGCCTACAGTTGACATCCTTGAGATAAATCAACTGAGAAGGCAGTTGGTTTTTCATGCTTATCTATGGGACAGACGTTTGATACATCTTTCCAGTTCTCATGGTAAAAATTCCCGAACTCCGGGCAGTTTGACACAACTGAAGGAGAAACCCCTCAGCTCTAGTGAGGAACTTCCTGAAAGGACTGCAATTTTGAGACCTGGAAAAAGTTTGGGGAGCTATGATTCAGCTCTTCAGAATGTGAAGACTGAAATAACATCTAGTGAAGGAAGACATGGTCAGA-TTCCTGATGGGGTTCACGAAAGATTGACTACTGATGAGAACCT</genome_strand>
        <mrna_strand>TGGAACTCAGTTTTTCAAATCATGCAGCAGCGAGCAGGGTTGCAAGTTGTGGTCATCTTCTTCACCGGGACTGTCTCCGGTTCTATGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGGAAAATGGTAGCTTGTTTTCGATATGCTCCTGTTCATGTTTATTCTGTCTTTCTCCCACCTCCAAAACTCGAATTTAGCTATGATAATCAGGAGTGGATTCAGAAAGAAGGTGATGAG.....................................................................................GTGCGCAGAAGGGCTAATGCGTTGTTTGCTGAGGTGTCCAAAGTTCTTCATGTCAAGTTGGAAAAATTCTCTGTTGATAGCAGCTTGAAAGCACCCAAGACAAGTGAGCAGATCACAGAGATGGAAGAAATATTAGAGAAGGAGAAAACTGAGTTTGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATTATTACGCAAGGCACTTAGCAGGGAGATCAAAGTTGGTCAGCCTACAGTTGACATCCTTGAGATAAATCAACTGAGAAGGCAGTTGGTTTTTCATGCTTATCTATGGGACAGACGTTTGATACATCTTTCCAGTTCTCATGGTAAAAATTCCCGAACTCCGGGCAGTTTGACACAACTGAAGGAGAAACCCCTCAGCTCTAGTGAGGAACTTCCTGAAAGGACTGCAATTTTGAGACCTGGAAAAAGTTTGGGGAGCTATGATTCAGCTCTTCAGAATGTGAAGACTGAAATAACATCTAGTNGAGGAAGACATGGTCAGATTTCCTGATGGGGTTCACGAAAGATTGACTACTGATGAGAACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E293047" ref_strand="+" ref_description="SGN-E293047 [cLET-12-M11]">
      <seq>aagggctaatgcgttgtttgctgaggtgtccaaagttcttcatgtcaagttggaaaaattctctgttgatagcagcttgaaagcacccaagacaagtgagcagatcacagagatggaagaaatattagagaaggagaaaactgagtttgagggattattacgcaaggcacttagcagggagatcaaagttggtcagcctacagttgacatccttgagataaatcaactgagaaggcagttggtttttcatgcttatctatgggacagacgtttgatacatctttccagttctcatggtaaaaattcccgaactccgggcagtttgacacaactgaaggagaaacccctcagctctagtgaggaacttcctgaaaggactgcaattttgagacctggaaaaagtttggggagctatgattcagctcttcagaatgtgaagactgaaataacatctagtgaaggaagacatggtcagattcctgatggggttcacgaaagattgactactgatgagaacctaactcacgggaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="19620" stop="21881"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19920" g_stop="20070" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="151" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20071" i_stop="21199" i_length="1129">
            <donor d_prob="0.758" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21200" g_stop="21581" g_length="382"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="533" r_length="382" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E293047" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>533</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E293047" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19920" e_stop="20070"/>
          <exon e_start="21200" e_stop="21581"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGGCTAATGCGTTGTTTGCTGAGGTGTCCAAAGTTCTTCATGTCAAGTTGGAAAAATTCTCTGTTGATAGCAGCTTGAAAGCACCCAAGACAAGTGAGCAGATCACAGAGATGGAAGAAATATTAGAGAAGGAGAAAACTGAGTTTGAGGTGGTTTCTTGTTTTTTCTTTCCTGTTGTTGAGATACTAAGTCATAACATCTGCATTGTCAGTGATGTATGAACAAATTTGTCAATCTGGTCTATTGAAAATGTAGCGATTAGTGACCTGTTTGAAGTTCAACTATTTGAGAGATGATTTCCAAAGTAATATCTCTCTTCTTTGGTGTGGATAACATGTTCCAAACCTTTTTAACTTTTTTAAACAACTTGAGAGTTTTAGTATGATTTGTGAGAAAATTCAGAGGCATGTTCCATCATTCTAAGATATGTGAAAATCAATGCAGCAGCAAGTTTGAGAAGAAAGAAATGATCAGGGTTCTCTGTAAGAATTAGCAGTAAAAAAAAGAATATAAGAGGAGTCAACAGAGGAAAACAACTGATTGAAGAGAGACTACAGTCCCAAGATGAACATGTATCCTAGGTCCTTTTGGTTCTAACAGAGAAAGGGTCTTTGGTTTGACTAGTCATCAAACCAGAAGTTGGGTTTCTTCCATTATAAATGTGTAATATAGAATCCTTCCTTTTGATGGGTCACCTCAGGAAGAAAGCGTTTTAATCTTTGAGTAATTGAGACCATACCCCATATAACTGTTAGGTCTAGGTCCTCAACCTTACCACCTTCCTCTGGGGCAATTAGGAACTCCCTCAACTGGAGGACTGTTCCTCAGAGCTGCACTTCAATTGCTGCTGTTTCTCTCAGTAGATGTACAGCTGTTGGGAACTTCAGTGTAAAGGGCATTATAACTCAAAATACATCTATTTCTTCTAATTAAAAGTCTGTTTGGTGGTAATTTTTCATTTAAGGCATGACCTCAAGTTTCCTTCTGAACAACAACTGCACCCCTGGGGATGAGTGGTTGCTCAATACCATCCCCTCTCTAGTCACAGCAGAAGATAATCAGTTTCTTACGGGCCCTCCTAATACGGAATAGTTCAAAAGTTAATTTTTAGCATGTGGGCACGCACTAACCCCCAAAAAGGTCCTCCCCATAGCCTTTAAAGCCTTATTTAGGGTAGATTCTTTTATTTCCTCTGTTCACCCTTTTCATTTTCTTTTGGGTAAGGTAGCAATGTAGCTCCAAATGACTTATTTCTTACTGGTGTTTTCATTGTTCTAGGGATTATTACGCAAGGCACTTAGCAGGGAGATCAAAGTTGGTCAGCCTACAGTTGACATCCTTGAGATAAATCAACTGAGAAGGCAGTTGGTTTTTCATGCTTATCTATGGGACAGACGTTTGATACATCTTTCCAGTTCTCATGGTAAAAATTCCCGAACTCCGGGCAGTTTGACACAACTGAAGGAGAAACCCCTCAGCTCTAGTGAGGAACTTCCTGAAAGGACTGCAATTTTGAGACCTGGAAAAAGTTTGGGGAGCTATGATTCAGCTCTTCAGAATGTGAAGACTGAAATAACATCTAGTGAAGGAAGACATGGTCAGATTCCTGATGGGGTTCACGAAAGATTGACTACTGATGAGAACCTAACTCACGGGAAAG</genome_strand>
        <mrna_strand>AAGGGCTAATGCGTTGTTTGCTGAGGTGTCCAAAGTTCTTCATGTCAAGTTGGAAAAATTCTCTGTTGATAGCAGCTTGAAAGCACCCAAGACAAGTGAGCAGATCACAGAGATGGAAGAAATATTAGAGAAGGAGAAAACTGAGTTTGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATTATTACGCAAGGCACTTAGCAGGGAGATCAAAGTTGGTCAGCCTACAGTTGACATCCTTGAGATAAATCAACTGAGAAGGCAGTTGGTTTTTCATGCTTATCTATGGGACAGACGTTTGATACATCTTTCCAGTTCTCATGGTAAAAATTCCCGAACTCCGGGCAGTTTGACACAACTGAAGGAGAAACCCCTCAGCTCTAGTGAGGAACTTCCTGAAAGGACTGCAATTTTGAGACCTGGAAAAAGTTTGGGGAGCTATGATTCAGCTCTTCAGAATGTGAAGACTGAAATAACATCTAGTGAAGGAAGACATGGTCAGATTCCTGATGGGGTTCACGAAAGATTGACTACTGATGAGAACCTAACTCACGGGAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E576695" ref_strand="+" ref_description="SGN-E576695 [59954]">
      <seq>ggcacttagcagggaggtcaaagttggtgagcctgtagttgacatccttgagataaatcgactgagaaggcagttggtttttcatgcttatctatgggacagacgcttgatacatctttccagttctcatggtaaaaattcccaaactcagggcagtttgacacaactgaaggagaaacccctcagctctagtgaggaacttcctgaaaggactacaatttcgagacatggaaaaagtttggggagctatgattcagttcttcagaatgtgaagactgaaataacatctaatgaaggaagacacggtcagattcctgatggggttcatgaaagattgactactgatgagaacctaactcacgggaaagacagcgagcatatttgtgctataagaagtacaggagatggaaatgaacctggaaaaaatgtcagacgcattctttcagatgcaaagttcccttctgtggaaagtttatctgacactcttgatgctgcatggactggtgaaagccacctggctattaaggagcatagcagtgcatttccaggttcgttcgttgtagattcttctgctttgaccggagtttcagcaaatacagatgtcgaaaggtctacgggtgacaaaaatggggctgaaatacctcatttatctgctaagtctgacaacacagattacctgacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="20914" stop="22202"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21214" g_stop="21902" g_length="689"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="683" r_length="683" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E576695" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>689</cumulative_length_of_scored_exons>
        <coverage percentage="1.009" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E576695" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21214" e_stop="21902"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCACTTAGCAGGGAGATCAAAGTTGGTCAGCCTACAGTTGACATCCTTGAGATAAATCAACTGAGAAGGCAGTTGGTTTTTCATGCTTATCTATGGGACAGACGTTTGATACATCTTTCCAGTTCTCATGGTAAAAATTCCCGAACTCCGGGCAGTTTGACACAACTGAAGGAGAAACCCCTCAGCTCTAGTGAGGAACTTCCTGAAAGGACTGCAATTTTGAGACCTGGAAAAAGTTTGGGGAGCTATGATTCAGCTCTTCAGAATGTGAAGACTGAAATAACATCTAGTGAAGGAAGACATGGTCAGATTCCTGATGGGGTTCACGAAAGATTGACTACTGATGAGAACCTAACTCACGGGAAAGACTGCGAGATTTTCTGTGCTATAAGAAATACAGGAGATGGTAATGTACTGGAACCTGGAAAAAATGTCAGACGTGTTCTTTCAGATGCAAAGTTCCCGTCTGTGGGAAGTTTATCCGACACTCTTGATGCTGCATGGACCGGTGAAAGCCACCTGGCTATTAAAGAGCATAACAGTGCATTTCCAGGTTCGTTCGTTGTAGATTCTACTGCTTTGACTGGAGTTTCAGCAAATACAGATGTCGAAAGGTCTCTGTGTGACAAAAATGGGGCTGAAATACCTCATTTATCTGCTAAGTCTGACAACACAGATTACCTGACCT</genome_strand>
        <mrna_strand>GGCACTTAGCAGGGAGGTCAAAGTTGGTGAGCCTGTAGTTGACATCCTTGAGATAAATCGACTGAGAAGGCAGTTGGTTTTTCATGCTTATCTATGGGACAGACGCTTGATACATCTTTCCAGTTCTCATGGTAAAAATTCCCAAACTCAGGGCAGTTTGACACAACTGAAGGAGAAACCCCTCAGCTCTAGTGAGGAACTTCCTGAAAGGACTACAATTTCGAGACATGGAAAAAGTTTGGGGAGCTATGATTCAGTTCTTCAGAATGTGAAGACTGAAATAACATCTAATGAAGGAAGACACGGTCAGATTCCTGATGGGGTTCATGAAAGATTGACTACTGATGAGAACCTAACTCACGGGAAAGACAGCGAGCATATTTGTGCTATAAGAAGTACAGGAGATGG-AA---A-T-GAACCTGGAAAAAATGTCAGACGCATTCTTTCAGATGCAAAGTTCCCTTCTGTGGAAAGTTTATCTGACACTCTTGATGCTGCATGGACTGGTGAAAGCCACCTGGCTATTAAGGAGCATAGCAGTGCATTTCCAGGTTCGTTCGTTGTAGATTCTTCTGCTTTGACCGGAGTTTCAGCAAATACAGATGTCGAAAGGTCTACGGGTGACAAAAATGGGGCTGAAATACCTCATTTATCTGCTAAGTCTGACAACACAGATTACCTGACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E261101" ref_strand="+" ref_description="SGN-E261101 [cLEG-65-G20]">
      <seq>acaactgaaggagaaacccctcagctctagtgaggaacttcctgaaaggactgcaattttgagacctggaaaaagtttggggagctatgattcagctcttcagaatgtgaagactgaaataacatctagtgaaggaagacatggtcagattcctgatggggttcacgaaagattgactactgatgagaacctaactcacgggaaagactgcgagattttctgtgctataagaaatacaggagatggtaatgtactggaacctggaaaaaatgtcagacgtgttctttcagatgcaaagttcccgtctgtgggaagtttatccgacactcttgatgctgcatggaccggtgaaagccacctggctattaaagagcataacagtgcatttccaggttcgttcgttgtagattctactgctttgactggagtttcagcaaatacagatgtcgaaaggtctctgtgtgacaaaaatggggctgaaatacctcatttatctgctaagtctgacaacacagattacctgacctgggcaacggcacatttctcaaatttctatcgttcgttcaacaagaatatcacagcaaatccacaatatgttgctaaattgaatgagcataatcctgtttatatcttgtcgtttagcgaattgctacatcaaggtggtgccaggcttcttacagctggtggtgaaaatgacattgttattccagtttatgatgatgagccgacagtatcatctcatatgcacttgtctcaccagataccgcaatcaaatgtcagatgaatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="21076" stop="22464"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21376" g_stop="22164" g_length="789"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="787" r_length="787" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E261101" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>789</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E261101" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21376" e_stop="22164"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAACTGAAGGAGAAACCCCTCAGCTCTAGTGAGGAACTTCCTGAAAGGACTGCAATTTTGAGACCTGGAAAAAGTTTGGGGAGCTATGATTCAGCTCTTCAGAATGTGAAGACTGAAATAACATCTAGTGAAGGAAGACATGGTCAGATTCCTGATGGGGTTCACGAAAGATTGACTACTGATGAGAACCTAACTCACGGGAAAGACTGCGAGATTTTCTGTGCTATAAGAAATACAGGAGATGGTAATGTACTGGAACCTGGAAAAAATGTCAGACGTGTTCTTTCAGATGCAAAGTTCCCGTCTGTGGGAAGTTTATCCGACACTCTTGATGCTGCATGGACCGGTGAAAGCCACCTGGCTATTAAAGAGCATAACAGTGCATTTCCAGGTTCGTTCGTTGTAGATTCTACTGCTTTGACTGGAGTTTCAGCAAATACAGATGTCGAAAGGTCTCTGTGTGACAAAAATGGGGCTGAAATACCTCATTTATCTGCTAAGTCTGACAACACAGATTACCTGACCTGGGCAACGGCACATTTCTCAAATTTCTATCGTTCGTTCAACAAGAATATCACAGCAAATCCACAATATGTTGCTAAATTGAATGAGCATAATCCTGTTTATATCTTGTCGTTTAGCGAATTGCTACATCAAGGTGGTGCCAGGCTTCTTACAGCTGTTGGTGAAAATGACATTGTTATTCCAGTTTATGATGATGAGCCGACAAGTATCATCTCATATGCACTTGTCTCACCAGATTACCGCAATCAAATGTCAGATGAATC</genome_strand>
        <mrna_strand>ACAACTGAAGGAGAAACCCCTCAGCTCTAGTGAGGAACTTCCTGAAAGGACTGCAATTTTGAGACCTGGAAAAAGTTTGGGGAGCTATGATTCAGCTCTTCAGAATGTGAAGACTGAAATAACATCTAGTGAAGGAAGACATGGTCAGATTCCTGATGGGGTTCACGAAAGATTGACTACTGATGAGAACCTAACTCACGGGAAAGACTGCGAGATTTTCTGTGCTATAAGAAATACAGGAGATGGTAATGTACTGGAACCTGGAAAAAATGTCAGACGTGTTCTTTCAGATGCAAAGTTCCCGTCTGTGGGAAGTTTATCCGACACTCTTGATGCTGCATGGACCGGTGAAAGCCACCTGGCTATTAAAGAGCATAACAGTGCATTTCCAGGTTCGTTCGTTGTAGATTCTACTGCTTTGACTGGAGTTTCAGCAAATACAGATGTCGAAAGGTCTCTGTGTGACAAAAATGGGGCTGAAATACCTCATTTATCTGCTAAGTCTGACAACACAGATTACCTGACCTGGGCAACGGCACATTTCTCAAATTTCTATCGTTCGTTCAACAAGAATATCACAGCAAATCCACAATATGTTGCTAAATTGAATGAGCATAATCCTGTTTATATCTTGTCGTTTAGCGAATTGCTACATCAAGGTGGTGCCAGGCTTCTTACAGCTGGTGGTGAAAATGACATTGTTATTCCAGTTTATGATGATGAGCCGAC-AGTATCATCTCATATGCACTTGTCTCACCAGA-TACCGCAATCAAATGTCAGATGAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E264225" ref_strand="+" ref_description="SGN-E264225 [cLEG-70-C22]">
      <seq>ctgaaggagaaacccctcagctctagtgaggaacttcctgaaaggactgcaattttgagacctggaaaaagtttggggagctatgattcagctcttcagaatgtgaagactgaaataacatctagtgaaggaagacatggtcagattcctgatggggttcacgaaagattgactactgatgagaacctaactcacgggaaagactgcgagattttctgtgctataagaaatacaggagatggtaatgtactggaacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="21080" stop="21937"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21380" g_stop="21637" g_length="258"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="258" r_length="258" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E264225" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>258</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E264225" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21380" e_stop="21637"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGAAGGAGAAACCCCTCAGCTCTAGTGAGGAACTTCCTGAAAGGACTGCAATTTTGAGACCTGGAAAAAGTTTGGGGAGCTATGATTCAGCTCTTCAGAATGTGAAGACTGAAATAACATCTAGTGAAGGAAGACATGGTCAGATTCCTGATGGGGTTCACGAAAGATTGACTACTGATGAGAACCTAACTCACGGGAAAGACTGCGAGATTTTCTGTGCTATAAGAAATACAGGAGATGGTAATGTACTGGAACCT</genome_strand>
        <mrna_strand>CTGAAGGAGAAACCCCTCAGCTCTAGTGAGGAACTTCCTGAAAGGACTGCAATTTTGAGACCTGGAAAAAGTTTGGGGAGCTATGATTCAGCTCTTCAGAATGTGAAGACTGAAATAACATCTAGTGAAGGAAGACATGGTCAGATTCCTGATGGGGTTCACGAAAGATTGACTACTGATGAGAACCTAACTCACGGGAAAGACTGCGAGATTTTCTGTGCTATAAGAAATACAGGAGATGGTAATGTACTGGAACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E248090" ref_strand="+" ref_description="SGN-E248090 [cLEF-47-P7]">
      <seq>agctcttcagaatgtgaagactgaaataacatctagtgaaggaagacatggtcagattcctgatggggttcacgaaagattgactactgatgagaacctaactcacgggaaagactgcgagattttctgtgctataagaaatacaggagatggtaatgtactggaacctggaaaaaatgtcagacgtgttctttcagatgcaaagttcccgtctgtgggaagtttatccgacactcttgatgctgcatggaccggtgaaagccacctggctattaaagagcataacagtgcatttccaggttcgttcgttgtagattctactgctttgactggagtttcagcaaatacagatgtcgaaaggtctctgtgtgacaaaaatggggctgaaatacctcatttatctgctaagtctgacaacacagattacctgacctgggcaacggcacatttctcaaatttctatcgttcgttcaacaagaatatcacagcaaatccacaatatgttgctaaattgaatgagcataatcctgtttatatcttgtcgtttagcgaattgctacatcaaggtggtgccaggcttcttacagctgttggtgaaaatgacattgttattccagtttatgatgatgagccgacaagtatcatctcatatgcacttgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="21169" stop="22429"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21469" g_stop="22129" g_length="661"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="661" r_length="661" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E248090" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E248090" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21469" e_stop="22129"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTCTTCAGAATGTGAAGACTGAAATAACATCTAGTGAAGGAAGACATGGTCAGATTCCTGATGGGGTTCACGAAAGATTGACTACTGATGAGAACCTAACTCACGGGAAAGACTGCGAGATTTTCTGTGCTATAAGAAATACAGGAGATGGTAATGTACTGGAACCTGGAAAAAATGTCAGACGTGTTCTTTCAGATGCAAAGTTCCCGTCTGTGGGAAGTTTATCCGACACTCTTGATGCTGCATGGACCGGTGAAAGCCACCTGGCTATTAAAGAGCATAACAGTGCATTTCCAGGTTCGTTCGTTGTAGATTCTACTGCTTTGACTGGAGTTTCAGCAAATACAGATGTCGAAAGGTCTCTGTGTGACAAAAATGGGGCTGAAATACCTCATTTATCTGCTAAGTCTGACAACACAGATTACCTGACCTGGGCAACGGCACATTTCTCAAATTTCTATCGTTCGTTCAACAAGAATATCACAGCAAATCCACAATATGTTGCTAAATTGAATGAGCATAATCCTGTTTATATCTTGTCGTTTAGCGAATTGCTACATCAAGGTGGTGCCAGGCTTCTTACAGCTGTTGGTGAAAATGACATTGTTATTCCAGTTTATGATGATGAGCCGACAAGTATCATCTCATATGCACTTGTC</genome_strand>
        <mrna_strand>AGCTCTTCAGAATGTGAAGACTGAAATAACATCTAGTGAAGGAAGACATGGTCAGATTCCTGATGGGGTTCACGAAAGATTGACTACTGATGAGAACCTAACTCACGGGAAAGACTGCGAGATTTTCTGTGCTATAAGAAATACAGGAGATGGTAATGTACTGGAACCTGGAAAAAATGTCAGACGTGTTCTTTCAGATGCAAAGTTCCCGTCTGTGGGAAGTTTATCCGACACTCTTGATGCTGCATGGACCGGTGAAAGCCACCTGGCTATTAAAGAGCATAACAGTGCATTTCCAGGTTCGTTCGTTGTAGATTCTACTGCTTTGACTGGAGTTTCAGCAAATACAGATGTCGAAAGGTCTCTGTGTGACAAAAATGGGGCTGAAATACCTCATTTATCTGCTAAGTCTGACAACACAGATTACCTGACCTGGGCAACGGCACATTTCTCAAATTTCTATCGTTCGTTCAACAAGAATATCACAGCAAATCCACAATATGTTGCTAAATTGAATGAGCATAATCCTGTTTATATCTTGTCGTTTAGCGAATTGCTACATCAAGGTGGTGCCAGGCTTCTTACAGCTGTTGGTGAAAATGACATTGTTATTCCAGTTTATGATGATGAGCCGACAAGTATCATCTCATATGCACTTGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E244238" ref_strand="+" ref_description="SGN-E244238 [cLEF-37-I17]">
      <seq>agctcttcagaatgtgaagactgaaataacatctagtgaaggaagacatggtcagattcctgatggggttcacgaaagattgactactgatgagaacctaactcacgggaaagactgcgagattttctgtgctataagaaatacaggagatggtaatgtactggaacctggaaaaaatgtcagacgtgttctttcagatgcaaagttcccgtctgtgggaagtttatccgacactcttgatgctgcatggaccggtgaaagccacctggctattaaagagcataacagtgcatttccaggttcgttcgttgtagattctactgctttgactggagtttcagcaaatacagatgtcgaaaggtctctgtgtgacaaaaatggggctgaaatacctcatttatctgctaagtctgacaacacagattacctgacctgggcaacggcacatttctcaaatttctatcgttcgttcaacaagaatatcacagcaaatccacaatatgttgctaaattgaatgagcataatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="21169" stop="22295"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21469" g_stop="21995" g_length="527"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="527" r_length="527" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E244238" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>527</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E244238" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21469" e_stop="21995"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTCTTCAGAATGTGAAGACTGAAATAACATCTAGTGAAGGAAGACATGGTCAGATTCCTGATGGGGTTCACGAAAGATTGACTACTGATGAGAACCTAACTCACGGGAAAGACTGCGAGATTTTCTGTGCTATAAGAAATACAGGAGATGGTAATGTACTGGAACCTGGAAAAAATGTCAGACGTGTTCTTTCAGATGCAAAGTTCCCGTCTGTGGGAAGTTTATCCGACACTCTTGATGCTGCATGGACCGGTGAAAGCCACCTGGCTATTAAAGAGCATAACAGTGCATTTCCAGGTTCGTTCGTTGTAGATTCTACTGCTTTGACTGGAGTTTCAGCAAATACAGATGTCGAAAGGTCTCTGTGTGACAAAAATGGGGCTGAAATACCTCATTTATCTGCTAAGTCTGACAACACAGATTACCTGACCTGGGCAACGGCACATTTCTCAAATTTCTATCGTTCGTTCAACAAGAATATCACAGCAAATCCACAATATGTTGCTAAATTGAATGAGCATAATC</genome_strand>
        <mrna_strand>AGCTCTTCAGAATGTGAAGACTGAAATAACATCTAGTGAAGGAAGACATGGTCAGATTCCTGATGGGGTTCACGAAAGATTGACTACTGATGAGAACCTAACTCACGGGAAAGACTGCGAGATTTTCTGTGCTATAAGAAATACAGGAGATGGTAATGTACTGGAACCTGGAAAAAATGTCAGACGTGTTCTTTCAGATGCAAAGTTCCCGTCTGTGGGAAGTTTATCCGACACTCTTGATGCTGCATGGACCGGTGAAAGCCACCTGGCTATTAAAGAGCATAACAGTGCATTTCCAGGTTCGTTCGTTGTAGATTCTACTGCTTTGACTGGAGTTTCAGCAAATACAGATGTCGAAAGGTCTCTGTGTGACAAAAATGGGGCTGAAATACCTCATTTATCTGCTAAGTCTGACAACACAGATTACCTGACCTGGGCAACGGCACATTTCTCAAATTTCTATCGTTCGTTCAACAAGAATATCACAGCAAATCCACAATATGTTGCTAAATTGAATGAGCATAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E556203" ref_strand="+" ref_description="SGN-E556203 [cTSD-2-L24]">
      <seq>aaaaaaactatagaaaaaaaaaaggaaaaaaagaaaaacaaaagaaaaaaaaaaaaaaataacagtgggtttcccggtgcggtcgttccccattctactgctttgactggagtttcagcaaatacatatgtcaaaaggtctctgtgtgacaaaaatggggctgaaatacctcatttatctgctaagtctgacaacacagattacctgacctgggcaacggcacatttctcaaatttctatcgttcgttcaacaagaatatcacagcaaatccacaatatgttgctaaattgaatgagcataatcctgtttatatcttgtcgtttagcgaattgctacatcaaggtggtgccaggcttcttacagctgttggtgaaaatgacattgttattccagtttatgatgatgagccgacaagtatcatctcatatgcacttgtctcaccagattaccgcaatcaaatgtcagatgaatctcaaaacctgaaagaaaatcacaagttttcagcttctttgtcatttctggattcattaaatctacttccgcttcactctgtggatggagtagtttcggaatctccaagaagttttggatctaccaacgaaagcatgtcatcgggttatagttctcgcagctcaaacatggatccaccagcatatattaatgctttgcatgcccgaatatctttctcagatgatggccctcctggaaaggttaagtacacagtcacctgctatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="21483" stop="22728"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21749" g_stop="22428" g_length="680"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="737" r_length="680" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E556203" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="0.923" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E556203" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21749" e_stop="22428"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATAACAGTGCATTTCCAGGTTCGTTCGTTGTAGATTCTACTGCTTTGACTGGAGTTTCAGCAAATACAGATGTCGAAAGGTCTCTGTGTGACAAAAATGGGGCTGAAATACCTCATTTATCTGCTAAGTCTGACAACACAGATTACCTGACCTGGGCAACGGCACATTTCTCAAATTTCTATCGTTCGTTCAACAAGAATATCACAGCAAATCCACAATATGTTGCTAAATTGAATGAGCATAATCCTGTTTATATCTTGTCGTTTAGCGAATTGCTACATCAAGGTGGTGCCAGGCTTCTTACAGCTGTTGGTGAAAATGACATTGTTATTCCAGTTTATGATGATGAGCCGACAAGTATCATCTCATATGCACTTGTCTCACCAGATTACCGCAATCAAATGTCAGATGAATCTCAAAACCTGAAAGAAAATCACAAGTTTTCAGCTTCTTTGTCATTTCTGGATTCATTAAATCTACTTCCGCTTCACTCTGTGGATGGAGTAGTTTCGGAATCTCCAAGAAGTTTTGGATCTACCAACGAAAGCATGTCATCGGGTTATAGTTCTCGCAGCTCAAACATGGATCCACCAGCATATATTAATGCTTTGCATGCCCGAATATCTTTCTCAGATGATGGCCCTCCTGGAAAGGTTAAGTACACAGTCACCTGCTATTA</genome_strand>
        <mrna_strand>AATAACAGTGGGTTTCCCGGTGCGGTCGTTCCCCATTCTACTGCTTTGACTGGAGTTTCAGCAAATACATATGTCAAAAGGTCTCTGTGTGACAAAAATGGGGCTGAAATACCTCATTTATCTGCTAAGTCTGACAACACAGATTACCTGACCTGGGCAACGGCACATTTCTCAAATTTCTATCGTTCGTTCAACAAGAATATCACAGCAAATCCACAATATGTTGCTAAATTGAATGAGCATAATCCTGTTTATATCTTGTCGTTTAGCGAATTGCTACATCAAGGTGGTGCCAGGCTTCTTACAGCTGTTGGTGAAAATGACATTGTTATTCCAGTTTATGATGATGAGCCGACAAGTATCATCTCATATGCACTTGTCTCACCAGATTACCGCAATCAAATGTCAGATGAATCTCAAAACCTGAAAGAAAATCACAAGTTTTCAGCTTCTTTGTCATTTCTGGATTCATTAAATCTACTTCCGCTTCACTCTGTGGATGGAGTAGTTTCGGAATCTCCAAGAAGTTTTGGATCTACCAACGAAAGCATGTCATCGGGTTATAGTTCTCGCAGCTCAAACATGGATCCACCAGCATATATTAATGCTTTGCATGCCCGAATATCTTTCTCAGATGATGGCCCTCCTGGAAAGGTTAAGTACACAGTCACCTGCTATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E252657" ref_strand="+" ref_description="SGN-E252657 [cLEG-16-A11]">
      <seq>caaatacagatgtcgaaaggtctctgtgtgacaaaaatggggctgaaatacctcatttatctgctaagtctgacaacacagattacctgacctgggcaacggcacatttctcaaatttctatcgttcgttcaacaagaatatcacagcaaatccacaatatgttgctaaattgaatgagcataatcctgtttatatcttgtcgtttagcgaattgctacatcaaagtggtgccaggcttcttacagctgttggtgaaaatgacattgttattccagtttatgatgatgagccgacaagtatcatctcatatgcacttgtctcaccagattaccgcaatcaaatgtcagatgaatctcaaaacctgaaagaaaatcacaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="21510" stop="22488"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21810" g_stop="22188" g_length="379"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="379" r_length="379" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E252657" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>379</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E252657" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21810" e_stop="22188"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAATACAGATGTCGAAAGGTCTCTGTGTGACAAAAATGGGGCTGAAATACCTCATTTATCTGCTAAGTCTGACAACACAGATTACCTGACCTGGGCAACGGCACATTTCTCAAATTTCTATCGTTCGTTCAACAAGAATATCACAGCAAATCCACAATATGTTGCTAAATTGAATGAGCATAATCCTGTTTATATCTTGTCGTTTAGCGAATTGCTACATCAAGGTGGTGCCAGGCTTCTTACAGCTGTTGGTGAAAATGACATTGTTATTCCAGTTTATGATGATGAGCCGACAAGTATCATCTCATATGCACTTGTCTCACCAGATTACCGCAATCAAATGTCAGATGAATCTCAAAACCTGAAAGAAAATCACAA</genome_strand>
        <mrna_strand>CAAATACAGATGTCGAAAGGTCTCTGTGTGACAAAAATGGGGCTGAAATACCTCATTTATCTGCTAAGTCTGACAACACAGATTACCTGACCTGGGCAACGGCACATTTCTCAAATTTCTATCGTTCGTTCAACAAGAATATCACAGCAAATCCACAATATGTTGCTAAATTGAATGAGCATAATCCTGTTTATATCTTGTCGTTTAGCGAATTGCTACATCAAAGTGGTGCCAGGCTTCTTACAGCTGTTGGTGAAAATGACATTGTTATTCCAGTTTATGATGATGAGCCGACAAGTATCATCTCATATGCACTTGTCTCACCAGATTACCGCAATCAAATGTCAGATGAATCTCAAAACCTGAAAGAAAATCACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E333991" ref_strand="+" ref_description="SGN-E333991 [cTOD-24-G9]">
      <seq>tcgaaaggtctctgtgtgacaaaaatggggctgaaatacctcatttatctgctaagtctgacaacacagattacctgacctgggcaacggcacatttctcaaatttctatcgttcgttcaacaagaatatcacagcaaatccacaatatgttgctaaattgaatgagcataatcctgtttatatcttgtcgtttagcgaattgctacatcaaggtggtgccaggcttcttacagctgttggtgaaaatgacattgttattccagtttatgatgatgagccgacaagtatcatctcatatgcacttgtctcaccagattaccgcaatcaaatgtcagatgaatctcaaaacctgaaagaaaatcacaagttttcagcttctttgtcatttctggattcattaaatctacttccgcttcactctgtggatggagtagtttcggaatctccaagaagttttggatctaccaacgaaagcatgtcatcgggttatagttctcgcagctcaaacatggatccaccagcatatattaatgctttgcatgcccgaatatctttctcagatgatggccctcctggaaaggttaagtacacagtcacctgctattatgcgaagcaattcgagaccttgagaaagtcttgttgccccaatgaatcagactttatacgttcccttagccgatgcaaaaaatggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="21522" stop="22814"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21822" g_stop="22514" g_length="693"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="693" r_length="693" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E333991" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>693</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E333991" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21822" e_stop="22514"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGAAAGGTCTCTGTGTGACAAAAATGGGGCTGAAATACCTCATTTATCTGCTAAGTCTGACAACACAGATTACCTGACCTGGGCAACGGCACATTTCTCAAATTTCTATCGTTCGTTCAACAAGAATATCACAGCAAATCCACAATATGTTGCTAAATTGAATGAGCATAATCCTGTTTATATCTTGTCGTTTAGCGAATTGCTACATCAAGGTGGTGCCAGGCTTCTTACAGCTGTTGGTGAAAATGACATTGTTATTCCAGTTTATGATGATGAGCCGACAAGTATCATCTCATATGCACTTGTCTCACCAGATTACCGCAATCAAATGTCAGATGAATCTCAAAACCTGAAAGAAAATCACAAGTTTTCAGCTTCTTTGTCATTTCTGGATTCATTAAATCTACTTCCGCTTCACTCTGTGGATGGAGTAGTTTCGGAATCTCCAAGAAGTTTTGGATCTACCAACGAAAGCATGTCATCGGGTTATAGTTCTCGCAGCTCAAACATGGATCCACCAGCATATATTAATGCTTTGCATGCCCGAATATCTTTCTCAGATGATGGCCCTCCTGGAAAGGTTAAGTACACAGTCACCTGCTATTATGCGAAGCAATTCGAGACCTTGAGAAAGTCTTGTTGCCCCAATGAATCAGACTTTATACGTTCCCTTAGCCGATGCAAAAAATGGG</genome_strand>
        <mrna_strand>TCGAAAGGTCTCTGTGTGACAAAAATGGGGCTGAAATACCTCATTTATCTGCTAAGTCTGACAACACAGATTACCTGACCTGGGCAACGGCACATTTCTCAAATTTCTATCGTTCGTTCAACAAGAATATCACAGCAAATCCACAATATGTTGCTAAATTGAATGAGCATAATCCTGTTTATATCTTGTCGTTTAGCGAATTGCTACATCAAGGTGGTGCCAGGCTTCTTACAGCTGTTGGTGAAAATGACATTGTTATTCCAGTTTATGATGATGAGCCGACAAGTATCATCTCATATGCACTTGTCTCACCAGATTACCGCAATCAAATGTCAGATGAATCTCAAAACCTGAAAGAAAATCACAAGTTTTCAGCTTCTTTGTCATTTCTGGATTCATTAAATCTACTTCCGCTTCACTCTGTGGATGGAGTAGTTTCGGAATCTCCAAGAAGTTTTGGATCTACCAACGAAAGCATGTCATCGGGTTATAGTTCTCGCAGCTCAAACATGGATCCACCAGCATATATTAATGCTTTGCATGCCCGAATATCTTTCTCAGATGATGGCCCTCCTGGAAAGGTTAAGTACACAGTCACCTGCTATTATGCGAAGCAATTCGAGACCTTGAGAAAGTCTTGTTGCCCCAATGAATCAGACTTTATACGTTCCCTTAGCCGATGCAAAAAATGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E459449" ref_strand="+" ref_description="SGN-E459449 [cPRO-27-L20]">
      <seq>cctgacctgggcaacggaacatttctcaaatttctattcttccttcaacaagaatatcacagcaaatccacaatatgttgctaaattgaatgagcataatcctgtttatatcttgtcgtttagcgaattgcaacatcaaggtggtgccaggcttcttatggctgttggtgaaaatgacattgttattccagtttatgatgatgagccaacaagtatcatctcatatgcacttgtctcaccagattaccgcaatcaaatgtcggatgaatctcaaaacctgaaagaaaatcacaaattttcagcttctttgtcgtttctggattcattaaatctactttcgcttcactctgtggatgaaatagtttcggaatccccaagaagttttggttctaccaacgaaagcatgtcatcgggtctcagttctcgcaactcaaacatggatccacctgcatatattaatgctttgcatgcccgaatatctttctcagatgatggccctcttggaaaggttaagtacacagtcacctgctattatgcgaagcaatttgagaccttgagaaagtcttgttgcccctgtgaatcagacttcatacgttcccttagccgatgcaaaaaatggggtgctcagggtgggaagagcaatgttttctttgccaaaaccttggacgaccgatttatcatcaagcaggtaacaaagacagagttggagtcgtttatcaagtttgcaccagcttactttaagtatttatccgactncatagctagtgggagcccaacttgcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="21595" stop="22978"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21895" g_stop="22678" g_length="784"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="784" r_length="784" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E459449" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>784</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E459449" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21895" e_stop="22678"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTGACCTGGGCAACGGCACATTTCTCAAATTTCTATCGTTCGTTCAACAAGAATATCACAGCAAATCCACAATATGTTGCTAAATTGAATGAGCATAATCCTGTTTATATCTTGTCGTTTAGCGAATTGCTACATCAAGGTGGTGCCAGGCTTCTTACAGCTGTTGGTGAAAATGACATTGTTATTCCAGTTTATGATGATGAGCCGACAAGTATCATCTCATATGCACTTGTCTCACCAGATTACCGCAATCAAATGTCAGATGAATCTCAAAACCTGAAAGAAAATCACAAGTTTTCAGCTTCTTTGTCATTTCTGGATTCATTAAATCTACTTCCGCTTCACTCTGTGGATGGAGTAGTTTCGGAATCTCCAAGAAGTTTTGGATCTACCAACGAAAGCATGTCATCGGGTTATAGTTCTCGCAGCTCAAACATGGATCCACCAGCATATATTAATGCTTTGCATGCCCGAATATCTTTCTCAGATGATGGCCCTCCTGGAAAGGTTAAGTACACAGTCACCTGCTATTATGCGAAGCAATTCGAGACCTTGAGAAAGTCTTGTTGCCCCAATGAATCAGACTTTATACGTTCCCTTAGCCGATGCAAAAAATGGGGTGCTCAGGGTGGGAAGAGCAATGTTTTCTTTGCCAAAACCTTGGACGACCGATTTATCATCAAGCAGGTAACGAAGACAGAGTTGGAGTCATTTATCAAGTTTGCACCAGCTTACTTTAAGTATTTATCTGACTCAATAGCTAGTGGGAGCCCAACTTGCTTG</genome_strand>
        <mrna_strand>CCTGACCTGGGCAACGGAACATTTCTCAAATTTCTATTCTTCCTTCAACAAGAATATCACAGCAAATCCACAATATGTTGCTAAATTGAATGAGCATAATCCTGTTTATATCTTGTCGTTTAGCGAATTGCAACATCAAGGTGGTGCCAGGCTTCTTATGGCTGTTGGTGAAAATGACATTGTTATTCCAGTTTATGATGATGAGCCAACAAGTATCATCTCATATGCACTTGTCTCACCAGATTACCGCAATCAAATGTCGGATGAATCTCAAAACCTGAAAGAAAATCACAAATTTTCAGCTTCTTTGTCGTTTCTGGATTCATTAAATCTACTTTCGCTTCACTCTGTGGATGAAATAGTTTCGGAATCCCCAAGAAGTTTTGGTTCTACCAACGAAAGCATGTCATCGGGTCTCAGTTCTCGCAACTCAAACATGGATCCACCTGCATATATTAATGCTTTGCATGCCCGAATATCTTTCTCAGATGATGGCCCTCTTGGAAAGGTTAAGTACACAGTCACCTGCTATTATGCGAAGCAATTTGAGACCTTGAGAAAGTCTTGTTGCCCCTGTGAATCAGACTTCATACGTTCCCTTAGCCGATGCAAAAAATGGGGTGCTCAGGGTGGGAAGAGCAATGTTTTCTTTGCCAAAACCTTGGACGACCGATTTATCATCAAGCAGGTAACAAAGACAGAGTTGGAGTCGTTTATCAAGTTTGCACCAGCTTACTTTAAGTATTTATCCGACTNCATAGCTAGTGGGAGCCCAACTTGCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E459418" ref_strand="+" ref_description="SGN-E459418 [cPRO-27-F20]">
      <seq>cctgacctgggcaacggaacatttctcaaatttctattcttccttcaacaagaatatcacagcaaatccacaatatgttgctaaattgaatgagcataatcctgtttatatcttgtcgtttagcgaattgcaacatcaaggtggtgccaggcttcttatggctgttggtgaaaatgacattgttattccagtttatgatgatgagccaacaagtatcatctcatatgcacttgtctcaccagattaccgcaatcaaatgtcggatgaatctcaaaacctgaaagaaaatcacaaattttcagcttctttgtcgtttctggattcattaaatctactttcgcttcactctgtggatgaaatagtttcggaatccccaagaagttttggttctaccaacgaaagcatgtcatcgggtctcagttctcgcaactcaaacatggatccacctgcatatattaatgctttgcatgcccgaatatctttctcagatgatggccctcttggaaaggttaagtacacagtcacctgctattatgcgaagcaatttgagaccttgagaaagtcttgttgcccctgtgaatcagacttcatacgttcccttagccgatgcaaaaaatggggtgctcagggtgggaagagcaatgttttctttgccaaaaccttggacgaccgatttatcatcaagcaggtaacaaagacagagttggagtcgtttatcaagtttgcaccagcttactttaagtatttatccgactncatagctagtgggagcccaacttgctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="21595" stop="22977"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21895" g_stop="22677" g_length="783"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="783" r_length="783" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E459418" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>783</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E459418" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21895" e_stop="22677"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTGACCTGGGCAACGGCACATTTCTCAAATTTCTATCGTTCGTTCAACAAGAATATCACAGCAAATCCACAATATGTTGCTAAATTGAATGAGCATAATCCTGTTTATATCTTGTCGTTTAGCGAATTGCTACATCAAGGTGGTGCCAGGCTTCTTACAGCTGTTGGTGAAAATGACATTGTTATTCCAGTTTATGATGATGAGCCGACAAGTATCATCTCATATGCACTTGTCTCACCAGATTACCGCAATCAAATGTCAGATGAATCTCAAAACCTGAAAGAAAATCACAAGTTTTCAGCTTCTTTGTCATTTCTGGATTCATTAAATCTACTTCCGCTTCACTCTGTGGATGGAGTAGTTTCGGAATCTCCAAGAAGTTTTGGATCTACCAACGAAAGCATGTCATCGGGTTATAGTTCTCGCAGCTCAAACATGGATCCACCAGCATATATTAATGCTTTGCATGCCCGAATATCTTTCTCAGATGATGGCCCTCCTGGAAAGGTTAAGTACACAGTCACCTGCTATTATGCGAAGCAATTCGAGACCTTGAGAAAGTCTTGTTGCCCCAATGAATCAGACTTTATACGTTCCCTTAGCCGATGCAAAAAATGGGGTGCTCAGGGTGGGAAGAGCAATGTTTTCTTTGCCAAAACCTTGGACGACCGATTTATCATCAAGCAGGTAACGAAGACAGAGTTGGAGTCATTTATCAAGTTTGCACCAGCTTACTTTAAGTATTTATCTGACTCAATAGCTAGTGGGAGCCCAACTTGCTT</genome_strand>
        <mrna_strand>CCTGACCTGGGCAACGGAACATTTCTCAAATTTCTATTCTTCCTTCAACAAGAATATCACAGCAAATCCACAATATGTTGCTAAATTGAATGAGCATAATCCTGTTTATATCTTGTCGTTTAGCGAATTGCAACATCAAGGTGGTGCCAGGCTTCTTATGGCTGTTGGTGAAAATGACATTGTTATTCCAGTTTATGATGATGAGCCAACAAGTATCATCTCATATGCACTTGTCTCACCAGATTACCGCAATCAAATGTCGGATGAATCTCAAAACCTGAAAGAAAATCACAAATTTTCAGCTTCTTTGTCGTTTCTGGATTCATTAAATCTACTTTCGCTTCACTCTGTGGATGAAATAGTTTCGGAATCCCCAAGAAGTTTTGGTTCTACCAACGAAAGCATGTCATCGGGTCTCAGTTCTCGCAACTCAAACATGGATCCACCTGCATATATTAATGCTTTGCATGCCCGAATATCTTTCTCAGATGATGGCCCTCTTGGAAAGGTTAAGTACACAGTCACCTGCTATTATGCGAAGCAATTTGAGACCTTGAGAAAGTCTTGTTGCCCCTGTGAATCAGACTTCATACGTTCCCTTAGCCGATGCAAAAAATGGGGTGCTCAGGGTGGGAAGAGCAATGTTTTCTTTGCCAAAACCTTGGACGACCGATTTATCATCAAGCAGGTAACAAAGACAGAGTTGGAGTCGTTTATCAAGTTTGCACCAGCTTACTTTAAGTATTTATCCGACTNCATAGCTAGTGGGAGCCCAACTTGCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E602914" ref_strand="+" ref_description="SGN-E602914 [55990]">
      <seq>ctcaaatttctatcgttccttcaacaagaatatcacagcaaatccacaatatgttgctaaattgaatgagcataatcctgtttatatcttgtcgtttagcgaattgcaacatcaaggtggtgccaggcttcttatggctgttggtgaaaatgacattgttattccagtttatgatgatgagccaacaagtatcatctcatatgcacttgtctcaccagattaccgcaatcaaatgtcggatgaatctcaaaacctgaaagaaaatcacaaattttcagcttctttgtcatttctggattcattaaatctactttcgcttcactctgtggatgaaatagtttcggaatccccaagaagttttggttctaccaacgaaagcatgtcatcgggtctcagttctcgcaactcaaacatggatccacctgcatatattaatgctttgcatgcccgaatatctttctcagatgatggccctcttggaaaggttaagtacacagtcacctgctattatgcgaagcaatttgagaccttgagaaagtcttgttgcccctgtgaatcagacttcatacgttccctttgccgatgcaaaaaatggggtgctcagggtgggaagagcaatgttttctttgccaaaaccttggacgaccgatttatcatcaagcaggtaacaaagacagagttggagtcgtttatcaagtttgcaccagcttactttaagtattatccgactcaatagctagtgggagcccaacttgcttggcaagattctggggatctaccacgttacatcaaagcatctcaaatgtgggaaaagaatcacgaatggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="21619" stop="28039"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21919" g_stop="22702" g_length="784"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="782" r_length="782" r_score="0.963"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22703" i_stop="27694" i_length="4992">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.997" a_score="0.91"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27695" g_stop="27739" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="783" r_stop="828" r_length="46" r_score="0.911"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E602914" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>829</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E602914" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21919" e_stop="22702"/>
          <exon e_start="27695" e_stop="27739"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCAAATTTCTATCGTTCGTTCAACAAGAATATCACAGCAAATCCACAATATGTTGCTAAATTGAATGAGCATAATCCTGTTTATATCTTGTCGTTTAGCGAATTGCTACATCAAGGTGGTGCCAGGCTTCTTACAGCTGTTGGTGAAAATGACATTGTTATTCCAGTTTATGATGATGAGCCGACAAGTATCATCTCATATGCACTTGTCTCACCAGATTACCGCAATCAAATGTCAGATGAATCTCAAAACCTGAAAGAAAATCACAAGTTTTCAGCTTCTTTGTCATTTCTGGATTCATTAAATCTACTTCCGCTTCACTCTGTGGATGGAGTAGTTTCGGAATCTCCAAGAAGTTTTGGATCTACCAACGAAAGCATGTCATCGGGTTATAGTTCTCGCAGCTCAAACATGGATCCACCAGCATATATTAATGCTTTGCATGCCCGAATATCTTTCTCAGATGATGGCCCTCCTGGAAAGGTTAAGTACACAGTCACCTGCTATTATGCGAAGCAATTCGAGACCTTGAGAAAGTCTTGTTGCCCCAATGAATCAGACTTTATACGTTCCCTTAGCCGATGCAAAAAATGGGGTGCTCAGGGTGGGAAGAGCAATGTTTTCTTTGCCAAAACCTTGGACGACCGATTTATCATCAAGCAGGTAACGAAGACAGAGTTGGAGTCATTTATCAAGTTTGCACCAGCTTACTTTAAGTATTTATCTGACTCAATAGCTAGTGGGAGCCCAACTTGCTTGGCAAAGATTCTGGGGATCTACCAGGTATGCTGTATATCATTTCTAAGTAACCAAAGTCATTGTTATAATCAGTATTTTCAGCTTTCTGATATCTATGTGCAGTGGAGCACTATTATTCTGGTGAAGCAGTCTGGGGTTGTAATTGTTAGCCAATTTGGCGTTTTTTCAGCTTATTATTATTTTACTGTTTTTTACTTATTTCAATTTAGTGCTTCCTATTTTCTAGCTAGACTTAGTCAACTTTAATTGCTCAACTTTCTGAAGTTAGTGGCCCCATTATGGTTGTTAGTGGCCCCCTTTTATGGTAGTTAGTGGCACATGTTCTTATTTTAGTTTTAATGTTTATGTTTTTTACTTGTATAAATTTAGACATTCTGCAGATTAATATACACAAGGAATTTCATAAGTTCACTCTATTTTTATTTTTTCAAATCAGTTTCTTGAGTATTTTTGTTCTAATAGTGGCATCAGAGCCTCTAGTTGATCTTACAAGACAAAAAAAAAGTTTTAACCTACAACACAAATGGCATCCAACAACCTACCTTTAAATCCACCATTCACTTTCACTGGTGAAAATTACCGACTCGGGTCTGTGAAGATGCAAGCTTTTTTGGAAGCCTATAAACTTTGGGAAATCATGACGGAAGATAAACCACTTGCTGCTCTACCAGCAAATCCTACCTTGGCTCAGATCAAATCCAACAACGAAGAGAAGACAAAGAAATCTAAAGCCAAGTCGCTTATGCAGAATGCTGTGGCAGATACTGTGTTTTACAGAATCATGGCTTGCAAAGCTGCAAAAGAGACTTGGGATAGGTTGAAAGAAGAATATCAAGGCAGCGATAGAACACATCAAATGCAAGTGGAACCTAAAAAGAGAGTTTGAGTCTTTGAATATGCAGGAGGATGAAACTATTAGTAAGTATGCTGATCGAATATCCTTAATTGTTAATAACATTAGACTTTTTGGTGAAGAATTTACAGACAAACGAATTGTGGAGAAAGTTCTTGTGACTCTTCCTGAGAGATTTGAATCTAAGATTTCCTCTCTTGAAGAATCCAAGGACCTGAGCAAACTTTCATTAGGTGAACTAATGAGTGCTCTTCAAGCTCAAGAGCAAAGGAGGACTATGAGACGGGAAAAGTTCATTGAAGGAGCTTTCTCTGTACAAAAGCAAAAAGGAAAGCAACAATTCCACCAAAAGAATAAGGGCAAGCATGATTGAGGAAACAATAGTGGAGATGTGAAGCAGAAGTTCCCTCCTTGCAAACATTGTAAAAGAAATACACATCTGGAGAAGTATTGTTGGTGGAGAGTCGATGCTATATGTGGCAATTGTAAGTAGACGGGACACGTATCCAAGGTTTGCAAATCAAGAGCAAAGGCCTCTGGTGCTTTGCAAGAACAAGTAGCAGAAACTGACGATGCACATGAAGAGCAACTATTTGCAGTTTCCTACTTTTCAATCAGTGAATCCTCTGATTCATGGCTTCTTGACAGTGGTTGCACAAATCACTTGTGCAACAAACTACTCAAATTCCTAGATGATACTTACAAATCTAAAGTAAAAGTGGGAAACAGTGAGGCAGTAGAAGTCAAAGGCAGAGGTACAGTGTCTATCTCAACAATATCAGGTATCAAAACTATTTCTGATGTTTTGTACACACCTGATATGAGTCAAAATTTGTTGAGTGTTGGACAGATGCTTGAAAATAATTATTCTCTGTATTTTAAGAATCGTGAATGTGTTGTTTCCGACCCTTCTGGAGTAGAGTTATTCTATGTCAAGATGAGCAACATAATGTTTTCAATTGATTGGGAGAAAATAACAGAGCAGGCTTACACTATTACTTCACAAACATGTACAAACCTATGGCACAAAATACAAACCTATGGCACAAAAGGTTTGGTCACTTCAATCTGAGAAGCATCGCCGAGATGAAAAAGAAGGAGCTAGTGGAAAATATGCCTGAATTTCTTTCTAATGCTCAAGTTTGTGAAACTTGCCAACAGGGAAAGCAACCAAAATTGCCATTTCAAGCAAATCAAGTACGAAGAGCTAACCAGAAACTTCAGCTCATTCATATGGATGTTTGCGGCCCAATGAAAACAGATTCGTTGAGTGGTAACAGATACTTTCTCCTCTTTATTGATGACTACAACAGAATGTGTTGGGTTTATTTCATAAGACTGAAGAGTGAAGTCTTTGATGTTTTTAAACAATTTAAAGCTTTAGTAGAAAATCAATGTAATCTTAGTATTAAGGCTTTAAGGTCTGACAATGGAGGAGAATACACTTCTTCTCAATTTGTGGAAAACAAGGTCTGACAACAGAGGAGAATACACTTCTTCTCAATTTGTGGAGTTTTGTAATAGCACAGGTATTGAACGCCAATTGACATTACCATACACTCCACAACTAAATGGCGTGTGAGAAAGGAAGAACAGGACAGTAATGGAGATGGCCATATGTCTTTTGCTCGAAAGAAAGATCCCAAATCAGTTTTGGGCTGAGGCAGTCAATATCTTTGTATATTTGCTGAACAGATTGCCTACTAAGGCCTTGCAGGACATGACTCCATATGAAGCTTGGTGTGGGAACAAACCATCAATACACCATCTCAGAATCTTTGGGTGTATATGTTATTATCGAGTTCCAGAAACAAAAAGGAGTAAGCTGGATAACAAGGCTTATAAAGGCATATTTATGGGCTATAGTTCATCCAAAGGTTACAAAATTTTCTGTTTTAAATCAGACAAACTAATTCTCAGCCGAGAAGTGAAGTTTGATGAAGCAGTTGGTTGGGATTGGATCAGAAGACCTCTTATTCTGATTCATTTTCAATAGAGCAGCCTCAACTTTCAGAAGATGAACTAGTGGATGATGTACCAGTGAGGGGAACTCGATCCTTAAAAGATGTCTATCAGCGGTATAACTTGGTTAGCTCTGAACCAACAAGCTATGCTGAAGCACAAGACTCTCAGGCATGGAGAAGAGCTATGCAAGAAGAACTAGACATGATCGAGAAGAATGGAACCTGACAGCTTGTTGACAGACCTAGAAATCGCAAGGTAATTGGTGTAAAATGGATTTTAAGACAAAACTCAATCCTGATGGAACAATTTGCAAACATAAGGCTAGATTGGTGGTGAAGGGATATGCACAACAATATGTGTGGATTACCAGGAAACATTTGCTCTTGTAGCAAGGTTTGCTTGCTCAACTACTGGAAAAGAGGATCAAGTTTATCTCTTAACAAAGGCTTTGTATGGCCTAAAACAAGCCCGAAGGGCATGGTATGAGAGGATGGACAATCATCTCATCCAACTTGGCTTTAGTAGAAGTCAAGTGAAGCTACTTTATATGTGAAAGTCAATGCTGCAGGTGAGTCCTTAATTGTCTCAATTTATGTGGATGACATGCTTGTGACAGGAAGCAAAATTGAACTAATCCAAAGGTTCAAGGATGAAATGGAGAAAATCTTTGGAATGACTGATCTTGGAGTCATGAAGTACTTTCTCGGCATGGAAGTGTTGCAATCCAGTGATGGAATTTTTATATGCCAGCAGAAATACATTTCGGATATTCTAAACAGGTTCAAAATGCAAGACTGCAAACCTGTGAGTACTCCAATATCTATTGGTGTGAAGCTTGCCAAGGATGAGGATTCCGAAAAAGAGGATGATAGTATGTATAGAAGCTTAATTGGCAGTCTTCTATATCTAACCGCAAGCAGGCCTGTCATTCTATTTGTTGTTAGTTTGCTCTCTAGGTTCATGCATTCACCTAGAGACACACACCTCACAGCTGCTAAAAGAGTGTTAAGGTATATTAAAGGAACCAACAAGTTTGGAATTTTTTTCCCAAACATCTGCCGAAGTAACTATGAACTTGATCGGGTACTTTGATAGTGATTGGGGTGGTGGAGTTGATGATTCCAGAAGCACATCTGGATATCTTTTCTGTTTGGGGACAAGTTGTTTTAGTTGGAGCTCTAGAAAACAAGAAACTACAGCTCAATCAACAGCAGAAGCTGAGTACATAGCTGCTGCATCTGCTGTGAATCGAGTTATCTGGCTAAGGAAGATGATGATGGACTTAGGCCATAAGCTACCAAGATCATGTGTGACAACAGTTCAGCAGTTTCAATCTAAAAAAATCCAGTGTTTTATGGTCGAACTAAACATATCAAGATCAAGTTTCATTTTATTAGAGAAGTCCAACAATTTAATGAAGTGTTGCTTGTTCATTGTTCATCTGAGAACTAGCTAGCTGACATTTTCACCAAGTCATTGCCAAAGGAAAGGTTTGAAGATCCGAGGCAAAGAATTAGTGTTTGCCACAAAAATGCCAAGGAGGAGTGTTAGACAATTGACATTTTTTCAGCTTATTATTATTTTTACTATTTTTTACTTATTTCAATTTAGTGCTTCCTATTTTCTAGTAGACTTAGTCAACTTTAGTTGCTCAACTTTCTGAAGTTAGTGGCCCCCTTTTATGGTAGTTAGTGGCACATGTTCTTATTTAGTTTTAATGTTTATGTTTTTTCTTTGTATAAATTCAGACTTTCTGCAGATTAATATATACAAGGAATTTCATAAGTTCACTCTATTTTTATTTTTTCAAATCAGTTTCTTGAGTATTTTTGTTCTAACAGTAACTAAGTTGTGTCTGTGGGTTATTATGTCCATCTGGTCTTCTATTGCAACTTCTTATTGTCAAAATATTTGAAGAATGTGTAAGATTATCATTGTTAAGCCTCCCATTTTAAAGTCACTTATTTTTCTTGATTGAGCTAATTTTCCAACATAGTCAGTCCTGTGCTTCAGAGGTGCTCCTAGCTGTACCCTAAATAAAACTAGGAGGTCACCCAAAAAAGTAGTATAAATTGGTTCATAAGATGGATCTAGCTTCTGCACTTTGCACTGCCCTTGAAATATTTTCTTTACAAAAGATGATGCCCTGAAATTTATATGCTCTCCAATTTTTAACTGCATTATTGGATGTTTGTTAGGTTACATCAAAGCATCTCAAAGGTGGG-AAAGAATCAAGAATGGAT</genome_strand>
        <mrna_strand>CTCAAATTTCTATCGTTCCTTCAACAAGAATATCACAGCAAATCCACAATATGTTGCTAAATTGAATGAGCATAATCCTGTTTATATCTTGTCGTTTAGCGAATTGCAACATCAAGGTGGTGCCAGGCTTCTTATGGCTGTTGGTGAAAATGACATTGTTATTCCAGTTTATGATGATGAGCCAACAAGTATCATCTCATATGCACTTGTCTCACCAGATTACCGCAATCAAATGTCGGATGAATCTCAAAACCTGAAAGAAAATCACAAATTTTCAGCTTCTTTGTCATTTCTGGATTCATTAAATCTACTTTCGCTTCACTCTGTGGATGAAATAGTTTCGGAATCCCCAAGAAGTTTTGGTTCTACCAACGAAAGCATGTCATCGGGTCTCAGTTCTCGCAACTCAAACATGGATCCACCTGCATATATTAATGCTTTGCATGCCCGAATATCTTTCTCAGATGATGGCCCTCTTGGAAAGGTTAAGTACACAGTCACCTGCTATTATGCGAAGCAATTTGAGACCTTGAGAAAGTCTTGTTGCCCCTGTGAATCAGACTTCATACGTTCCCTTTGCCGATGCAAAAAATGGGGTGCTCAGGGTGGGAAGAGCAATGTTTTCTTTGCCAAAACCTTGGACGACCGATTTATCATCAAGCAGGTAACAAAGACAGAGTTGGAGTCGTTTATCAAGTTTGCACCAGCTTACTTTAAGTA-TTATCCGACTCAATAGCTAGTGGGAGCCCAACTTGCTTGGC-AAGATTCTGGGGATCTACCAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACATCAAAGCATCTCAAATGTGGGAAAAGAATCACGAATGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E570570" ref_strand="+" ref_description="SGN-E570570 [15175]">
      <seq>gaagatgacattgttattccagtttatgatgatgagccaacaagtatcatctcatatgcacttgtctcaccagattaccgcaatcaaatgtcggatgaatctcaaaacctgaaagaaaatcacaaattttcagcttctttgtcgtttctggattcattaaatctactttcgcttcactctgtggatgaaatagtttcggaatccccaagaagttttggttctaccaacgaaagcatgtcatcgggtctctgttctcgcaactcaaacatggatccacctgctgctttgcatgcccgaatatctttctcagatgatggccctcttggaaaggttaagtacacagtcacctgctattatgcaaagcaatttgagaccttgagaaagtcttgttgcccctgtgaatcagacttcatacgttcccttagccgatgcagaaaaattggggtgctcagggtgggaagagccatgttttctttgccaaaaccttggacgaccgatttatcatcacagcaggtaacaaagacagagttggaggtcggtttaatccacggtttgcaccagctta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="21764" stop="22929"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22064" g_stop="22602" g_length="539"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="533" r_length="533" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E570570" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>539</cumulative_length_of_scored_exons>
        <coverage percentage="0.954" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E570570" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22064" e_stop="22602"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAATGACATTGTTATTCCAGTTTATGATGATGAGCCGACAAGTATCATCTCATATGCACTTGTCTCACCAGATTACCGCAATCAAATGTCAGATGAATCTCAAAACCTGAAAGAAAATCACAAGTTTTCAGCTTCTTTGTCATTTCTGGATTCATTAAATCTACTTCCGCTTCACTCTGTGGATGGAGTAGTTTCGGAATCTCCAAGAAGTTTTGGATCTACCAACGAAAGCATGTCATCGGGTTATAGTTCTCGCAGCTCAAACATGGATCCACCAGCATATATTAATGCTTTGCATGCCCGAATATCTTTCTCAGATGATGGCCCTCCTGGAAAGGTTAAGTACACAGTCACCTGCTATTATGCGAAGCAATTCGAGACCTTGAGAAAGTCTTGTTGCCCCAATGAATCAGACTTTATACGTTCCCTTAGCCGATGCA-AAAAA-TGGGGTGCTCAGGGTGGGAAGAGCAATGTTTTCTTTGCCAAAACCTTGGACGACCGATTTATCATCA-AGCAGGTAACGAAGACAGAGTTGGA</genome_strand>
        <mrna_strand>GAAGATGACATTGTTATTCCAGTTTATGATGATGAGCCAACAAGTATCATCTCATATGCACTTGTCTCACCAGATTACCGCAATCAAATGTCGGATGAATCTCAAAACCTGAAAGAAAATCACAAATTTTCAGCTTCTTTGTCGTTTCTGGATTCATTAAATCTACTTTCGCTTCACTCTGTGGATGAAATAGTTTCGGAATCCCCAAGAAGTTTTGGTTCTACCAACGAAAGCATGTCATCGGGTCTCTGTTCTCGCAACTCAAACATGGATCCACCTGC---------TGCTTTGCATGCCCGAATATCTTTCTCAGATGATGGCCCTCTTGGAAAGGTTAAGTACACAGTCACCTGCTATTATGCAAAGCAATTTGAGACCTTGAGAAAGTCTTGTTGCCCCTGTGAATCAGACTTCATACGTTCCCTTAGCCGATGCAGAAAAATTGGGGTGCTCAGGGTGGGAAGAGCCATGTTTTCTTTGCCAAAACCTTGGACGACCGATTTATCATCACAGCAGGTAACAAAGACAGAGTTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E575819" ref_strand="+" ref_description="SGN-E575819 [35504]">
      <seq>tgatgagccaacaagtatcatctcatatgcacttgtctcaccagattaccgcaatcaaatgtcggatgaatctcaaaacctgaaagaaaatcacaaattttcagcttctttgtcgtttctggattcattaaatctactttcgcttcactctgtggatgaaatagtttcggaatccccaagaagttttggttctaccaacgaaagcatgtcatcgggtctctgttctcgcaactcaaacatggatccacctgctgctttgcatgcccgaatatctttctcagatgatggccctcttggaaaggttaagtacacagtcacctgctattatgcaaagcaatttgagaccttgagaaagtcttgttgcccctgtgaatcagacttcatacgttcccttagccgatgcaaaaaatggggtgctcagggtgggaagagccatgttttctttgccaaaaccttggacgaccgatttatcatcaagcaggtaacaaagacagagttggagtcgtttatcaagtttgcaccagcttactttaagtatttatccgactcaatagctagtgggagcccaacttgcttggcaaagattctggggatctaccaggttacatcaaagcatctcaaaggtgggaaagaatcaagaatggatgtgcttgttatggaaaatcttctttttaagcgcaaacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="21793" stop="28077"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22093" g_stop="22702" g_length="610"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="601" r_length="601" r_score="0.944"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22703" i_stop="27694" i_length="4992">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27695" g_stop="27777" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="602" r_stop="685" r_length="84" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E575819" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>693</cumulative_length_of_scored_exons>
        <coverage percentage="1.012" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E575819" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22093" e_stop="22702"/>
          <exon e_start="27695" e_stop="27777"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATGAGCCGACAAGTATCATCTCATATGCACTTGTCTCACCAGATTACCGCAATCAAATGTCAGATGAATCTCAAAACCTGAAAGAAAATCACAAGTTTTCAGCTTCTTTGTCATTTCTGGATTCATTAAATCTACTTCCGCTTCACTCTGTGGATGGAGTAGTTTCGGAATCTCCAAGAAGTTTTGGATCTACCAACGAAAGCATGTCATCGGGTTATAGTTCTCGCAGCTCAAACATGGATCCACCAGCATATATTAATGCTTTGCATGCCCGAATATCTTTCTCAGATGATGGCCCTCCTGGAAAGGTTAAGTACACAGTCACCTGCTATTATGCGAAGCAATTCGAGACCTTGAGAAAGTCTTGTTGCCCCAATGAATCAGACTTTATACGTTCCCTTAGCCGATGCAAAAAATGGGGTGCTCAGGGTGGGAAGAGCAATGTTTTCTTTGCCAAAACCTTGGACGACCGATTTATCATCAAGCAGGTAACGAAGACAGAGTTGGAGTCATTTATCAAGTTTGCACCAGCTTACTTTAAGTATTTATCTGACTCAATAGCTAGTGGGAGCCCAACTTGCTTGGCAAAGATTCTGGGGATCTACCAGGTATGCTGTATATCATTTCTAAGTAACCAAAGTCATTGTTATAATCAGTATTTTCAGCTTTCTGATATCTATGTGCAGTGGAGCACTATTATTCTGGTGAAGCAGTCTGGGGTTGTAATTGTTAGCCAATTTGGCGTTTTTTCAGCTTATTATTATTTTACTGTTTTTTACTTATTTCAATTTAGTGCTTCCTATTTTCTAGCTAGACTTAGTCAACTTTAATTGCTCAACTTTCTGAAGTTAGTGGCCCCATTATGGTTGTTAGTGGCCCCCTTTTATGGTAGTTAGTGGCACATGTTCTTATTTTAGTTTTAATGTTTATGTTTTTTACTTGTATAAATTTAGACATTCTGCAGATTAATATACACAAGGAATTTCATAAGTTCACTCTATTTTTATTTTTTCAAATCAGTTTCTTGAGTATTTTTGTTCTAATAGTGGCATCAGAGCCTCTAGTTGATCTTACAAGACAAAAAAAAAGTTTTAACCTACAACACAAATGGCATCCAACAACCTACCTTTAAATCCACCATTCACTTTCACTGGTGAAAATTACCGACTCGGGTCTGTGAAGATGCAAGCTTTTTTGGAAGCCTATAAACTTTGGGAAATCATGACGGAAGATAAACCACTTGCTGCTCTACCAGCAAATCCTACCTTGGCTCAGATCAAATCCAACAACGAAGAGAAGACAAAGAAATCTAAAGCCAAGTCGCTTATGCAGAATGCTGTGGCAGATACTGTGTTTTACAGAATCATGGCTTGCAAAGCTGCAAAAGAGACTTGGGATAGGTTGAAAGAAGAATATCAAGGCAGCGATAGAACACATCAAATGCAAGTGGAACCTAAAAAGAGAGTTTGAGTCTTTGAATATGCAGGAGGATGAAACTATTAGTAAGTATGCTGATCGAATATCCTTAATTGTTAATAACATTAGACTTTTTGGTGAAGAATTTACAGACAAACGAATTGTGGAGAAAGTTCTTGTGACTCTTCCTGAGAGATTTGAATCTAAGATTTCCTCTCTTGAAGAATCCAAGGACCTGAGCAAACTTTCATTAGGTGAACTAATGAGTGCTCTTCAAGCTCAAGAGCAAAGGAGGACTATGAGACGGGAAAAGTTCATTGAAGGAGCTTTCTCTGTACAAAAGCAAAAAGGAAAGCAACAATTCCACCAAAAGAATAAGGGCAAGCATGATTGAGGAAACAATAGTGGAGATGTGAAGCAGAAGTTCCCTCCTTGCAAACATTGTAAAAGAAATACACATCTGGAGAAGTATTGTTGGTGGAGAGTCGATGCTATATGTGGCAATTGTAAGTAGACGGGACACGTATCCAAGGTTTGCAAATCAAGAGCAAAGGCCTCTGGTGCTTTGCAAGAACAAGTAGCAGAAACTGACGATGCACATGAAGAGCAACTATTTGCAGTTTCCTACTTTTCAATCAGTGAATCCTCTGATTCATGGCTTCTTGACAGTGGTTGCACAAATCACTTGTGCAACAAACTACTCAAATTCCTAGATGATACTTACAAATCTAAAGTAAAAGTGGGAAACAGTGAGGCAGTAGAAGTCAAAGGCAGAGGTACAGTGTCTATCTCAACAATATCAGGTATCAAAACTATTTCTGATGTTTTGTACACACCTGATATGAGTCAAAATTTGTTGAGTGTTGGACAGATGCTTGAAAATAATTATTCTCTGTATTTTAAGAATCGTGAATGTGTTGTTTCCGACCCTTCTGGAGTAGAGTTATTCTATGTCAAGATGAGCAACATAATGTTTTCAATTGATTGGGAGAAAATAACAGAGCAGGCTTACACTATTACTTCACAAACATGTACAAACCTATGGCACAAAATACAAACCTATGGCACAAAAGGTTTGGTCACTTCAATCTGAGAAGCATCGCCGAGATGAAAAAGAAGGAGCTAGTGGAAAATATGCCTGAATTTCTTTCTAATGCTCAAGTTTGTGAAACTTGCCAACAGGGAAAGCAACCAAAATTGCCATTTCAAGCAAATCAAGTACGAAGAGCTAACCAGAAACTTCAGCTCATTCATATGGATGTTTGCGGCCCAATGAAAACAGATTCGTTGAGTGGTAACAGATACTTTCTCCTCTTTATTGATGACTACAACAGAATGTGTTGGGTTTATTTCATAAGACTGAAGAGTGAAGTCTTTGATGTTTTTAAACAATTTAAAGCTTTAGTAGAAAATCAATGTAATCTTAGTATTAAGGCTTTAAGGTCTGACAATGGAGGAGAATACACTTCTTCTCAATTTGTGGAAAACAAGGTCTGACAACAGAGGAGAATACACTTCTTCTCAATTTGTGGAGTTTTGTAATAGCACAGGTATTGAACGCCAATTGACATTACCATACACTCCACAACTAAATGGCGTGTGAGAAAGGAAGAACAGGACAGTAATGGAGATGGCCATATGTCTTTTGCTCGAAAGAAAGATCCCAAATCAGTTTTGGGCTGAGGCAGTCAATATCTTTGTATATTTGCTGAACAGATTGCCTACTAAGGCCTTGCAGGACATGACTCCATATGAAGCTTGGTGTGGGAACAAACCATCAATACACCATCTCAGAATCTTTGGGTGTATATGTTATTATCGAGTTCCAGAAACAAAAAGGAGTAAGCTGGATAACAAGGCTTATAAAGGCATATTTATGGGCTATAGTTCATCCAAAGGTTACAAAATTTTCTGTTTTAAATCAGACAAACTAATTCTCAGCCGAGAAGTGAAGTTTGATGAAGCAGTTGGTTGGGATTGGATCAGAAGACCTCTTATTCTGATTCATTTTCAATAGAGCAGCCTCAACTTTCAGAAGATGAACTAGTGGATGATGTACCAGTGAGGGGAACTCGATCCTTAAAAGATGTCTATCAGCGGTATAACTTGGTTAGCTCTGAACCAACAAGCTATGCTGAAGCACAAGACTCTCAGGCATGGAGAAGAGCTATGCAAGAAGAACTAGACATGATCGAGAAGAATGGAACCTGACAGCTTGTTGACAGACCTAGAAATCGCAAGGTAATTGGTGTAAAATGGATTTTAAGACAAAACTCAATCCTGATGGAACAATTTGCAAACATAAGGCTAGATTGGTGGTGAAGGGATATGCACAACAATATGTGTGGATTACCAGGAAACATTTGCTCTTGTAGCAAGGTTTGCTTGCTCAACTACTGGAAAAGAGGATCAAGTTTATCTCTTAACAAAGGCTTTGTATGGCCTAAAACAAGCCCGAAGGGCATGGTATGAGAGGATGGACAATCATCTCATCCAACTTGGCTTTAGTAGAAGTCAAGTGAAGCTACTTTATATGTGAAAGTCAATGCTGCAGGTGAGTCCTTAATTGTCTCAATTTATGTGGATGACATGCTTGTGACAGGAAGCAAAATTGAACTAATCCAAAGGTTCAAGGATGAAATGGAGAAAATCTTTGGAATGACTGATCTTGGAGTCATGAAGTACTTTCTCGGCATGGAAGTGTTGCAATCCAGTGATGGAATTTTTATATGCCAGCAGAAATACATTTCGGATATTCTAAACAGGTTCAAAATGCAAGACTGCAAACCTGTGAGTACTCCAATATCTATTGGTGTGAAGCTTGCCAAGGATGAGGATTCCGAAAAAGAGGATGATAGTATGTATAGAAGCTTAATTGGCAGTCTTCTATATCTAACCGCAAGCAGGCCTGTCATTCTATTTGTTGTTAGTTTGCTCTCTAGGTTCATGCATTCACCTAGAGACACACACCTCACAGCTGCTAAAAGAGTGTTAAGGTATATTAAAGGAACCAACAAGTTTGGAATTTTTTTCCCAAACATCTGCCGAAGTAACTATGAACTTGATCGGGTACTTTGATAGTGATTGGGGTGGTGGAGTTGATGATTCCAGAAGCACATCTGGATATCTTTTCTGTTTGGGGACAAGTTGTTTTAGTTGGAGCTCTAGAAAACAAGAAACTACAGCTCAATCAACAGCAGAAGCTGAGTACATAGCTGCTGCATCTGCTGTGAATCGAGTTATCTGGCTAAGGAAGATGATGATGGACTTAGGCCATAAGCTACCAAGATCATGTGTGACAACAGTTCAGCAGTTTCAATCTAAAAAAATCCAGTGTTTTATGGTCGAACTAAACATATCAAGATCAAGTTTCATTTTATTAGAGAAGTCCAACAATTTAATGAAGTGTTGCTTGTTCATTGTTCATCTGAGAACTAGCTAGCTGACATTTTCACCAAGTCATTGCCAAAGGAAAGGTTTGAAGATCCGAGGCAAAGAATTAGTGTTTGCCACAAAAATGCCAAGGAGGAGTGTTAGACAATTGACATTTTTTCAGCTTATTATTATTTTTACTATTTTTTACTTATTTCAATTTAGTGCTTCCTATTTTCTAGTAGACTTAGTCAACTTTAGTTGCTCAACTTTCTGAAGTTAGTGGCCCCCTTTTATGGTAGTTAGTGGCACATGTTCTTATTTAGTTTTAATGTTTATGTTTTTTCTTTGTATAAATTCAGACTTTCTGCAGATTAATATATACAAGGAATTTCATAAGTTCACTCTATTTTTATTTTTTCAAATCAGTTTCTTGAGTATTTTTGTTCTAACAGTAACTAAGTTGTGTCTGTGGGTTATTATGTCCATCTGGTCTTCTATTGCAACTTCTTATTGTCAAAATATTTGAAGAATGTGTAAGATTATCATTGTTAAGCCTCCCATTTTAAAGTCACTTATTTTTCTTGATTGAGCTAATTTTCCAACATAGTCAGTCCTGTGCTTCAGAGGTGCTCCTAGCTGTACCCTAAATAAAACTAGGAGGTCACCCAAAAAAGTAGTATAAATTGGTTCATAAGATGGATCTAGCTTCTGCACTTTGCACTGCCCTTGAAATATTTTCTTTACAAAAGATGATGCCCTGAAATTTATATGCTCTCCAATTTTTAACTGCATTATTGGATGTTTGTTAGGTTACATCAAAGCATCTCAAAGGTGGGAAAGAATCAAGAATGGATGTGCTTGTTATGGAAAATCTTCTTTTTAAGCGC-AACAT</genome_strand>
        <mrna_strand>TGATGAGCCAACAAGTATCATCTCATATGCACTTGTCTCACCAGATTACCGCAATCAAATGTCGGATGAATCTCAAAACCTGAAAGAAAATCACAAATTTTCAGCTTCTTTGTCGTTTCTGGATTCATTAAATCTACTTTCGCTTCACTCTGTGGATGAAATAGTTTCGGAATCCCCAAGAAGTTTTGGTTCTACCAACGAAAGCATGTCATCGGGTCTCTGTTCTCGCAACTCAAACATGGATCCACCTGC---------TGCTTTGCATGCCCGAATATCTTTCTCAGATGATGGCCCTCTTGGAAAGGTTAAGTACACAGTCACCTGCTATTATGCAAAGCAATTTGAGACCTTGAGAAAGTCTTGTTGCCCCTGTGAATCAGACTTCATACGTTCCCTTAGCCGATGCAAAAAATGGGGTGCTCAGGGTGGGAAGAGCCATGTTTTCTTTGCCAAAACCTTGGACGACCGATTTATCATCAAGCAGGTAACAAAGACAGAGTTGGAGTCGTTTATCAAGTTTGCACCAGCTTACTTTAAGTATTTATCCGACTCAATAGCTAGTGGGAGCCCAACTTGCTTGGCAAAGATTCTGGGGATCTACCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACATCAAAGCATCTCAAAGGTGGGAAAGAATCAAGAATGGATGTGCTTGTTATGGAAAATCTTCTTTTTAAGCGCAAACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E279726" ref_strand="+" ref_description="SGN-E279726 [cLER-5-D14]">
      <seq>ttttcagcttctttgtcatttctggattcattaaatctacttccgcttcactctgtggatggagtagtttcggaatctccaagaagttttggatctaccaacgaaagcatgtcatcgggttatagttctcgcagctcaaacatggatccaccagcatatattaatgctttgcatgcccgaatatctttctcagatgatggccctcctggaaaggttaagtacacagtcacctgctattatgcgaagcaattcgagaccttgagaaagtcttgttgccccaatgaatcagactttatacgttcccttagccgatgcaaaaaatggggtgctcagggtgggaagagcaatgttttctttgccaaaaccttggacgaccgatttatcatcaagcaggtaacgaagacagagttggagtcatttatcaagtttgcaccagcttactttaagtatttatctgactcaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="21890" stop="22953"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22190" g_stop="22653" g_length="464"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="464" r_length="464" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E279726" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>464</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E279726" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22190" e_stop="22653"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCAGCTTCTTTGTCATTTCTGGATTCATTAAATCTACTTCCGCTTCACTCTGTGGATGGAGTAGTTTCGGAATCTCCAAGAAGTTTTGGATCTACCAACGAAAGCATGTCATCGGGTTATAGTTCTCGCAGCTCAAACATGGATCCACCAGCATATATTAATGCTTTGCATGCCCGAATATCTTTCTCAGATGATGGCCCTCCTGGAAAGGTTAAGTACACAGTCACCTGCTATTATGCGAAGCAATTCGAGACCTTGAGAAAGTCTTGTTGCCCCAATGAATCAGACTTTATACGTTCCCTTAGCCGATGCAAAAAATGGGGTGCTCAGGGTGGGAAGAGCAATGTTTTCTTTGCCAAAACCTTGGACGACCGATTTATCATCAAGCAGGTAACGAAGACAGAGTTGGAGTCATTTATCAAGTTTGCACCAGCTTACTTTAAGTATTTATCTGACTCAAT</genome_strand>
        <mrna_strand>TTTTCAGCTTCTTTGTCATTTCTGGATTCATTAAATCTACTTCCGCTTCACTCTGTGGATGGAGTAGTTTCGGAATCTCCAAGAAGTTTTGGATCTACCAACGAAAGCATGTCATCGGGTTATAGTTCTCGCAGCTCAAACATGGATCCACCAGCATATATTAATGCTTTGCATGCCCGAATATCTTTCTCAGATGATGGCCCTCCTGGAAAGGTTAAGTACACAGTCACCTGCTATTATGCGAAGCAATTCGAGACCTTGAGAAAGTCTTGTTGCCCCAATGAATCAGACTTTATACGTTCCCTTAGCCGATGCAAAAAATGGGGTGCTCAGGGTGGGAAGAGCAATGTTTTCTTTGCCAAAACCTTGGACGACCGATTTATCATCAAGCAGGTAACGAAGACAGAGTTGGAGTCATTTATCAAGTTTGCACCAGCTTACTTTAAGTATTTATCTGACTCAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E704949" ref_strand="+" ref_description="SGN-E704949 [FA25CH10]">
      <seq>gtagtttcggaatctccaagaagttttggatctaccaacgaaagcatgtcatcgggttatagttctcgcagctcaaacatggatccaccagcatatattaatgctttgcatgcccgaatatctttctcagatgatggccctcctggaaaggttaagtacacagtcacctgctattatgcgaagcaattcgagaccttgagaaagtcttgttgccccaatgaatcagactttatacgttcccttagccgatgcaaaaaatggggtgctcagggtgggaagagcaatgttttctttgccaaaaccttggacgaccgatttatcatcaagcaggtaacgaagacagagttggagtcatttatcaagtttgcaccagcttactttaagtatttatctgactcaatagctagtgggagcccaacttgcttggcaaagattctggggatctaccaggttacatcaaagcatctcaaaggtgggaaagaatcaagaatggatgtgcttgttatggaaaatcttctttttaagcgcaacatcactagactgtatgacctcaaagggtcgtctcgatcacgctataatccagattcaagtggaactaacacagttttacttgatcagaacttgattgaagcaatgccaacttctccgatttttgtgggaacgcaagctaagcggctgctgcagagagctgtgtggaatgatacttcatttctagcgtcaatagatgtgatgcattactcattactagttggggtggatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="21953" stop="28719"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22253" g_stop="22702" g_length="450"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="450" r_length="450" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22703" i_stop="27694" i_length="4992">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27695" g_stop="27961" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="451" r_stop="717" r_length="267" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27962" i_stop="28376" i_length="415">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28377" g_stop="28419" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="718" r_stop="760" r_length="43" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E704949" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>760</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E704949" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22253" e_stop="22702"/>
          <exon e_start="27695" e_stop="27961"/>
          <exon e_start="28377" e_stop="28419"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAGTTTCGGAATCTCCAAGAAGTTTTGGATCTACCAACGAAAGCATGTCATCGGGTTATAGTTCTCGCAGCTCAAACATGGATCCACCAGCATATATTAATGCTTTGCATGCCCGAATATCTTTCTCAGATGATGGCCCTCCTGGAAAGGTTAAGTACACAGTCACCTGCTATTATGCGAAGCAATTCGAGACCTTGAGAAAGTCTTGTTGCCCCAATGAATCAGACTTTATACGTTCCCTTAGCCGATGCAAAAAATGGGGTGCTCAGGGTGGGAAGAGCAATGTTTTCTTTGCCAAAACCTTGGACGACCGATTTATCATCAAGCAGGTAACGAAGACAGAGTTGGAGTCATTTATCAAGTTTGCACCAGCTTACTTTAAGTATTTATCTGACTCAATAGCTAGTGGGAGCCCAACTTGCTTGGCAAAGATTCTGGGGATCTACCAGGTATGCTGTATATCATTTCTAAGTAACCAAAGTCATTGTTATAATCAGTATTTTCAGCTTTCTGATATCTATGTGCAGTGGAGCACTATTATTCTGGTGAAGCAGTCTGGGGTTGTAATTGTTAGCCAATTTGGCGTTTTTTCAGCTTATTATTATTTTACTGTTTTTTACTTATTTCAATTTAGTGCTTCCTATTTTCTAGCTAGACTTAGTCAACTTTAATTGCTCAACTTTCTGAAGTTAGTGGCCCCATTATGGTTGTTAGTGGCCCCCTTTTATGGTAGTTAGTGGCACATGTTCTTATTTTAGTTTTAATGTTTATGTTTTTTACTTGTATAAATTTAGACATTCTGCAGATTAATATACACAAGGAATTTCATAAGTTCACTCTATTTTTATTTTTTCAAATCAGTTTCTTGAGTATTTTTGTTCTAATAGTGGCATCAGAGCCTCTAGTTGATCTTACAAGACAAAAAAAAAGTTTTAACCTACAACACAAATGGCATCCAACAACCTACCTTTAAATCCACCATTCACTTTCACTGGTGAAAATTACCGACTCGGGTCTGTGAAGATGCAAGCTTTTTTGGAAGCCTATAAACTTTGGGAAATCATGACGGAAGATAAACCACTTGCTGCTCTACCAGCAAATCCTACCTTGGCTCAGATCAAATCCAACAACGAAGAGAAGACAAAGAAATCTAAAGCCAAGTCGCTTATGCAGAATGCTGTGGCAGATACTGTGTTTTACAGAATCATGGCTTGCAAAGCTGCAAAAGAGACTTGGGATAGGTTGAAAGAAGAATATCAAGGCAGCGATAGAACACATCAAATGCAAGTGGAACCTAAAAAGAGAGTTTGAGTCTTTGAATATGCAGGAGGATGAAACTATTAGTAAGTATGCTGATCGAATATCCTTAATTGTTAATAACATTAGACTTTTTGGTGAAGAATTTACAGACAAACGAATTGTGGAGAAAGTTCTTGTGACTCTTCCTGAGAGATTTGAATCTAAGATTTCCTCTCTTGAAGAATCCAAGGACCTGAGCAAACTTTCATTAGGTGAACTAATGAGTGCTCTTCAAGCTCAAGAGCAAAGGAGGACTATGAGACGGGAAAAGTTCATTGAAGGAGCTTTCTCTGTACAAAAGCAAAAAGGAAAGCAACAATTCCACCAAAAGAATAAGGGCAAGCATGATTGAGGAAACAATAGTGGAGATGTGAAGCAGAAGTTCCCTCCTTGCAAACATTGTAAAAGAAATACACATCTGGAGAAGTATTGTTGGTGGAGAGTCGATGCTATATGTGGCAATTGTAAGTAGACGGGACACGTATCCAAGGTTTGCAAATCAAGAGCAAAGGCCTCTGGTGCTTTGCAAGAACAAGTAGCAGAAACTGACGATGCACATGAAGAGCAACTATTTGCAGTTTCCTACTTTTCAATCAGTGAATCCTCTGATTCATGGCTTCTTGACAGTGGTTGCACAAATCACTTGTGCAACAAACTACTCAAATTCCTAGATGATACTTACAAATCTAAAGTAAAAGTGGGAAACAGTGAGGCAGTAGAAGTCAAAGGCAGAGGTACAGTGTCTATCTCAACAATATCAGGTATCAAAACTATTTCTGATGTTTTGTACACACCTGATATGAGTCAAAATTTGTTGAGTGTTGGACAGATGCTTGAAAATAATTATTCTCTGTATTTTAAGAATCGTGAATGTGTTGTTTCCGACCCTTCTGGAGTAGAGTTATTCTATGTCAAGATGAGCAACATAATGTTTTCAATTGATTGGGAGAAAATAACAGAGCAGGCTTACACTATTACTTCACAAACATGTACAAACCTATGGCACAAAATACAAACCTATGGCACAAAAGGTTTGGTCACTTCAATCTGAGAAGCATCGCCGAGATGAAAAAGAAGGAGCTAGTGGAAAATATGCCTGAATTTCTTTCTAATGCTCAAGTTTGTGAAACTTGCCAACAGGGAAAGCAACCAAAATTGCCATTTCAAGCAAATCAAGTACGAAGAGCTAACCAGAAACTTCAGCTCATTCATATGGATGTTTGCGGCCCAATGAAAACAGATTCGTTGAGTGGTAACAGATACTTTCTCCTCTTTATTGATGACTACAACAGAATGTGTTGGGTTTATTTCATAAGACTGAAGAGTGAAGTCTTTGATGTTTTTAAACAATTTAAAGCTTTAGTAGAAAATCAATGTAATCTTAGTATTAAGGCTTTAAGGTCTGACAATGGAGGAGAATACACTTCTTCTCAATTTGTGGAAAACAAGGTCTGACAACAGAGGAGAATACACTTCTTCTCAATTTGTGGAGTTTTGTAATAGCACAGGTATTGAACGCCAATTGACATTACCATACACTCCACAACTAAATGGCGTGTGAGAAAGGAAGAACAGGACAGTAATGGAGATGGCCATATGTCTTTTGCTCGAAAGAAAGATCCCAAATCAGTTTTGGGCTGAGGCAGTCAATATCTTTGTATATTTGCTGAACAGATTGCCTACTAAGGCCTTGCAGGACATGACTCCATATGAAGCTTGGTGTGGGAACAAACCATCAATACACCATCTCAGAATCTTTGGGTGTATATGTTATTATCGAGTTCCAGAAACAAAAAGGAGTAAGCTGGATAACAAGGCTTATAAAGGCATATTTATGGGCTATAGTTCATCCAAAGGTTACAAAATTTTCTGTTTTAAATCAGACAAACTAATTCTCAGCCGAGAAGTGAAGTTTGATGAAGCAGTTGGTTGGGATTGGATCAGAAGACCTCTTATTCTGATTCATTTTCAATAGAGCAGCCTCAACTTTCAGAAGATGAACTAGTGGATGATGTACCAGTGAGGGGAACTCGATCCTTAAAAGATGTCTATCAGCGGTATAACTTGGTTAGCTCTGAACCAACAAGCTATGCTGAAGCACAAGACTCTCAGGCATGGAGAAGAGCTATGCAAGAAGAACTAGACATGATCGAGAAGAATGGAACCTGACAGCTTGTTGACAGACCTAGAAATCGCAAGGTAATTGGTGTAAAATGGATTTTAAGACAAAACTCAATCCTGATGGAACAATTTGCAAACATAAGGCTAGATTGGTGGTGAAGGGATATGCACAACAATATGTGTGGATTACCAGGAAACATTTGCTCTTGTAGCAAGGTTTGCTTGCTCAACTACTGGAAAAGAGGATCAAGTTTATCTCTTAACAAAGGCTTTGTATGGCCTAAAACAAGCCCGAAGGGCATGGTATGAGAGGATGGACAATCATCTCATCCAACTTGGCTTTAGTAGAAGTCAAGTGAAGCTACTTTATATGTGAAAGTCAATGCTGCAGGTGAGTCCTTAATTGTCTCAATTTATGTGGATGACATGCTTGTGACAGGAAGCAAAATTGAACTAATCCAAAGGTTCAAGGATGAAATGGAGAAAATCTTTGGAATGACTGATCTTGGAGTCATGAAGTACTTTCTCGGCATGGAAGTGTTGCAATCCAGTGATGGAATTTTTATATGCCAGCAGAAATACATTTCGGATATTCTAAACAGGTTCAAAATGCAAGACTGCAAACCTGTGAGTACTCCAATATCTATTGGTGTGAAGCTTGCCAAGGATGAGGATTCCGAAAAAGAGGATGATAGTATGTATAGAAGCTTAATTGGCAGTCTTCTATATCTAACCGCAAGCAGGCCTGTCATTCTATTTGTTGTTAGTTTGCTCTCTAGGTTCATGCATTCACCTAGAGACACACACCTCACAGCTGCTAAAAGAGTGTTAAGGTATATTAAAGGAACCAACAAGTTTGGAATTTTTTTCCCAAACATCTGCCGAAGTAACTATGAACTTGATCGGGTACTTTGATAGTGATTGGGGTGGTGGAGTTGATGATTCCAGAAGCACATCTGGATATCTTTTCTGTTTGGGGACAAGTTGTTTTAGTTGGAGCTCTAGAAAACAAGAAACTACAGCTCAATCAACAGCAGAAGCTGAGTACATAGCTGCTGCATCTGCTGTGAATCGAGTTATCTGGCTAAGGAAGATGATGATGGACTTAGGCCATAAGCTACCAAGATCATGTGTGACAACAGTTCAGCAGTTTCAATCTAAAAAAATCCAGTGTTTTATGGTCGAACTAAACATATCAAGATCAAGTTTCATTTTATTAGAGAAGTCCAACAATTTAATGAAGTGTTGCTTGTTCATTGTTCATCTGAGAACTAGCTAGCTGACATTTTCACCAAGTCATTGCCAAAGGAAAGGTTTGAAGATCCGAGGCAAAGAATTAGTGTTTGCCACAAAAATGCCAAGGAGGAGTGTTAGACAATTGACATTTTTTCAGCTTATTATTATTTTTACTATTTTTTACTTATTTCAATTTAGTGCTTCCTATTTTCTAGTAGACTTAGTCAACTTTAGTTGCTCAACTTTCTGAAGTTAGTGGCCCCCTTTTATGGTAGTTAGTGGCACATGTTCTTATTTAGTTTTAATGTTTATGTTTTTTCTTTGTATAAATTCAGACTTTCTGCAGATTAATATATACAAGGAATTTCATAAGTTCACTCTATTTTTATTTTTTCAAATCAGTTTCTTGAGTATTTTTGTTCTAACAGTAACTAAGTTGTGTCTGTGGGTTATTATGTCCATCTGGTCTTCTATTGCAACTTCTTATTGTCAAAATATTTGAAGAATGTGTAAGATTATCATTGTTAAGCCTCCCATTTTAAAGTCACTTATTTTTCTTGATTGAGCTAATTTTCCAACATAGTCAGTCCTGTGCTTCAGAGGTGCTCCTAGCTGTACCCTAAATAAAACTAGGAGGTCACCCAAAAAAGTAGTATAAATTGGTTCATAAGATGGATCTAGCTTCTGCACTTTGCACTGCCCTTGAAATATTTTCTTTACAAAAGATGATGCCCTGAAATTTATATGCTCTCCAATTTTTAACTGCATTATTGGATGTTTGTTAGGTTACATCAAAGCATCTCAAAGGTGGGAAAGAATCAAGAATGGATGTGCTTGTTATGGAAAATCTTCTTTTTAAGCGCAACATCACTAGACTGTATGACCTCAAAGGGTCGTCTCGATCACGCTATAATCCAGATTCAAGTGGAAGTAACAAAGTTTTACTTGATCAGAACTTGATTGAAGCAATGCCAACTTCTCCGATTTTTGTGGGAACGCAAGCTAAGCGGCTGCTGCAGAGAGCTGTGTGGAATGATACTTCATTTCTAGCGGTAAGCTTTGAAACAGCACCGATATGACTAGTAACTTCGTTAAATTGTGTTCTATAAAGAGTTCTGTATTTCTTCGTTCTAGCTGGGGTTACTAGTTTATTATTTCCTCTCTTCAATAAAGATTATAGATGATTGCTGGACCCGTCCCCCTTTTCTCCCTTTGCCACACCCGGTATCTTTTCTTTGTTTTCTAATTGTTTCTCCTTTCTTTTGCAAGATGCACTTGACCTTGTCACTGCACTAGTTCTCTCATTTGTTAGTAGGTTCTCCAAACTTTTTTGTTAGTCTATGTTAACCACCACCAAGTATACGTTGAAGTGTCCAAAGTGGGACTTCATGCTCTTCAAACACGTATTAGACGCAACTTATGTTTCAGTCCCTCCTCTGCTATATTAATAGAGTTATGGTTTTGCAGTCAATAGATGTGATGGATTACTCATTACTAGTTGGGGTGGATG</genome_strand>
        <mrna_strand>GTAGTTTCGGAATCTCCAAGAAGTTTTGGATCTACCAACGAAAGCATGTCATCGGGTTATAGTTCTCGCAGCTCAAACATGGATCCACCAGCATATATTAATGCTTTGCATGCCCGAATATCTTTCTCAGATGATGGCCCTCCTGGAAAGGTTAAGTACACAGTCACCTGCTATTATGCGAAGCAATTCGAGACCTTGAGAAAGTCTTGTTGCCCCAATGAATCAGACTTTATACGTTCCCTTAGCCGATGCAAAAAATGGGGTGCTCAGGGTGGGAAGAGCAATGTTTTCTTTGCCAAAACCTTGGACGACCGATTTATCATCAAGCAGGTAACGAAGACAGAGTTGGAGTCATTTATCAAGTTTGCACCAGCTTACTTTAAGTATTTATCTGACTCAATAGCTAGTGGGAGCCCAACTTGCTTGGCAAAGATTCTGGGGATCTACCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACATCAAAGCATCTCAAAGGTGGGAAAGAATCAAGAATGGATGTGCTTGTTATGGAAAATCTTCTTTTTAAGCGCAACATCACTAGACTGTATGACCTCAAAGGGTCGTCTCGATCACGCTATAATCCAGATTCAAGTGGAACTAACACAGTTTTACTTGATCAGAACTTGATTGAAGCAATGCCAACTTCTCCGATTTTTGTGGGAACGCAAGCTAAGCGGCTGCTGCAGAGAGCTGTGTGGAATGATACTTCATTTCTAGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................TCAATAGATGTGATGCATTACTCATTACTAGTTGGGGTGGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E707731" ref_strand="+" ref_description="SGN-E707731 [FA33DC10]">
      <seq>cattaatgctttgcatgcccgaatatctttctcagatgatggccctcctggaaaggttaagtacacagtcacctgctattatgcgaagcaattcgagaccttgagaaagtcttgttgccccaatgaatcagactttatacgttcccttagccgatgcaaaaaatggggtgctcagggcgggaagagcaatgttttctttgccaaaaccttggacgaccgatttatcatcaagcaggtaacgaagacagagttggagtcatttatcaagtttgcaccagcttactttaagtatttatctgactcaatagctagtgggagcccaacttgcttggcaaagattctggggatctaccaggttacatcaaagcatctcaaaggtgggaaagaatcaagaatggatgtgcttgttatggaaaatcttctttttaagcgcaacatcactagactgtatgacctcaaagggtcgtctcgatcacgctataatccagattcaagtggaagtaacaaagttttacttgatcagaacttgattgaagcaatgccaacttctccgatttttgtgggaacgcaagctaagcggctgctgcagagagctgtgtggaatgatacttcatttctagcgtcaatagatgtgatggattactcattactagttggggtggatgagaagaagcaggaactggtgcttggtattattgatttcatgagacagtatacgtgggacaagcatctcgagacttgngtaaaggcttcaggtattctaggtgggccgaagaatgcagccccaacggtgatttctccaagcaatacaaaataagattcaggaaagcaatgtctacatactttctgatggtgccagatgagtggcctacatgaagtgatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="22049" stop="28939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22348" g_stop="22702" g_length="355"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="355" r_length="355" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22703" i_stop="27694" i_length="4992">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27695" g_stop="27961" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="356" r_stop="622" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27962" i_stop="28376" i_length="415">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28377" g_stop="28639" g_length="263"/>
          <reference_exon_boundary r_type="cDNA" r_start="623" r_stop="884" r_length="262" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E707731" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>885</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E707731" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22348" e_stop="22702"/>
          <exon e_start="27695" e_stop="27961"/>
          <exon e_start="28377" e_stop="28639"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTAATGCTTTGCATGCCCGAATATCTTTCTCAGATGATGGCCCTCCTGGAAAGGTTAAGTACACAGTCACCTGCTATTATGCGAAGCAATTCGAGACCTTGAGAAAGTCTTGTTGCCCCAATGAATCAGACTTTATACGTTCCCTTAGCCGATGCAAAAAATGGGGTGCTCAGGGTGGGAAGAGCAATGTTTTCTTTGCCAAAACCTTGGACGACCGATTTATCATCAAGCAGGTAACGAAGACAGAGTTGGAGTCATTTATCAAGTTTGCACCAGCTTACTTTAAGTATTTATCTGACTCAATAGCTAGTGGGAGCCCAACTTGCTTGGCAAAGATTCTGGGGATCTACCAGGTATGCTGTATATCATTTCTAAGTAACCAAAGTCATTGTTATAATCAGTATTTTCAGCTTTCTGATATCTATGTGCAGTGGAGCACTATTATTCTGGTGAAGCAGTCTGGGGTTGTAATTGTTAGCCAATTTGGCGTTTTTTCAGCTTATTATTATTTTACTGTTTTTTACTTATTTCAATTTAGTGCTTCCTATTTTCTAGCTAGACTTAGTCAACTTTAATTGCTCAACTTTCTGAAGTTAGTGGCCCCATTATGGTTGTTAGTGGCCCCCTTTTATGGTAGTTAGTGGCACATGTTCTTATTTTAGTTTTAATGTTTATGTTTTTTACTTGTATAAATTTAGACATTCTGCAGATTAATATACACAAGGAATTTCATAAGTTCACTCTATTTTTATTTTTTCAAATCAGTTTCTTGAGTATTTTTGTTCTAATAGTGGCATCAGAGCCTCTAGTTGATCTTACAAGACAAAAAAAAAGTTTTAACCTACAACACAAATGGCATCCAACAACCTACCTTTAAATCCACCATTCACTTTCACTGGTGAAAATTACCGACTCGGGTCTGTGAAGATGCAAGCTTTTTTGGAAGCCTATAAACTTTGGGAAATCATGACGGAAGATAAACCACTTGCTGCTCTACCAGCAAATCCTACCTTGGCTCAGATCAAATCCAACAACGAAGAGAAGACAAAGAAATCTAAAGCCAAGTCGCTTATGCAGAATGCTGTGGCAGATACTGTGTTTTACAGAATCATGGCTTGCAAAGCTGCAAAAGAGACTTGGGATAGGTTGAAAGAAGAATATCAAGGCAGCGATAGAACACATCAAATGCAAGTGGAACCTAAAAAGAGAGTTTGAGTCTTTGAATATGCAGGAGGATGAAACTATTAGTAAGTATGCTGATCGAATATCCTTAATTGTTAATAACATTAGACTTTTTGGTGAAGAATTTACAGACAAACGAATTGTGGAGAAAGTTCTTGTGACTCTTCCTGAGAGATTTGAATCTAAGATTTCCTCTCTTGAAGAATCCAAGGACCTGAGCAAACTTTCATTAGGTGAACTAATGAGTGCTCTTCAAGCTCAAGAGCAAAGGAGGACTATGAGACGGGAAAAGTTCATTGAAGGAGCTTTCTCTGTACAAAAGCAAAAAGGAAAGCAACAATTCCACCAAAAGAATAAGGGCAAGCATGATTGAGGAAACAATAGTGGAGATGTGAAGCAGAAGTTCCCTCCTTGCAAACATTGTAAAAGAAATACACATCTGGAGAAGTATTGTTGGTGGAGAGTCGATGCTATATGTGGCAATTGTAAGTAGACGGGACACGTATCCAAGGTTTGCAAATCAAGAGCAAAGGCCTCTGGTGCTTTGCAAGAACAAGTAGCAGAAACTGACGATGCACATGAAGAGCAACTATTTGCAGTTTCCTACTTTTCAATCAGTGAATCCTCTGATTCATGGCTTCTTGACAGTGGTTGCACAAATCACTTGTGCAACAAACTACTCAAATTCCTAGATGATACTTACAAATCTAAAGTAAAAGTGGGAAACAGTGAGGCAGTAGAAGTCAAAGGCAGAGGTACAGTGTCTATCTCAACAATATCAGGTATCAAAACTATTTCTGATGTTTTGTACACACCTGATATGAGTCAAAATTTGTTGAGTGTTGGACAGATGCTTGAAAATAATTATTCTCTGTATTTTAAGAATCGTGAATGTGTTGTTTCCGACCCTTCTGGAGTAGAGTTATTCTATGTCAAGATGAGCAACATAATGTTTTCAATTGATTGGGAGAAAATAACAGAGCAGGCTTACACTATTACTTCACAAACATGTACAAACCTATGGCACAAAATACAAACCTATGGCACAAAAGGTTTGGTCACTTCAATCTGAGAAGCATCGCCGAGATGAAAAAGAAGGAGCTAGTGGAAAATATGCCTGAATTTCTTTCTAATGCTCAAGTTTGTGAAACTTGCCAACAGGGAAAGCAACCAAAATTGCCATTTCAAGCAAATCAAGTACGAAGAGCTAACCAGAAACTTCAGCTCATTCATATGGATGTTTGCGGCCCAATGAAAACAGATTCGTTGAGTGGTAACAGATACTTTCTCCTCTTTATTGATGACTACAACAGAATGTGTTGGGTTTATTTCATAAGACTGAAGAGTGAAGTCTTTGATGTTTTTAAACAATTTAAAGCTTTAGTAGAAAATCAATGTAATCTTAGTATTAAGGCTTTAAGGTCTGACAATGGAGGAGAATACACTTCTTCTCAATTTGTGGAAAACAAGGTCTGACAACAGAGGAGAATACACTTCTTCTCAATTTGTGGAGTTTTGTAATAGCACAGGTATTGAACGCCAATTGACATTACCATACACTCCACAACTAAATGGCGTGTGAGAAAGGAAGAACAGGACAGTAATGGAGATGGCCATATGTCTTTTGCTCGAAAGAAAGATCCCAAATCAGTTTTGGGCTGAGGCAGTCAATATCTTTGTATATTTGCTGAACAGATTGCCTACTAAGGCCTTGCAGGACATGACTCCATATGAAGCTTGGTGTGGGAACAAACCATCAATACACCATCTCAGAATCTTTGGGTGTATATGTTATTATCGAGTTCCAGAAACAAAAAGGAGTAAGCTGGATAACAAGGCTTATAAAGGCATATTTATGGGCTATAGTTCATCCAAAGGTTACAAAATTTTCTGTTTTAAATCAGACAAACTAATTCTCAGCCGAGAAGTGAAGTTTGATGAAGCAGTTGGTTGGGATTGGATCAGAAGACCTCTTATTCTGATTCATTTTCAATAGAGCAGCCTCAACTTTCAGAAGATGAACTAGTGGATGATGTACCAGTGAGGGGAACTCGATCCTTAAAAGATGTCTATCAGCGGTATAACTTGGTTAGCTCTGAACCAACAAGCTATGCTGAAGCACAAGACTCTCAGGCATGGAGAAGAGCTATGCAAGAAGAACTAGACATGATCGAGAAGAATGGAACCTGACAGCTTGTTGACAGACCTAGAAATCGCAAGGTAATTGGTGTAAAATGGATTTTAAGACAAAACTCAATCCTGATGGAACAATTTGCAAACATAAGGCTAGATTGGTGGTGAAGGGATATGCACAACAATATGTGTGGATTACCAGGAAACATTTGCTCTTGTAGCAAGGTTTGCTTGCTCAACTACTGGAAAAGAGGATCAAGTTTATCTCTTAACAAAGGCTTTGTATGGCCTAAAACAAGCCCGAAGGGCATGGTATGAGAGGATGGACAATCATCTCATCCAACTTGGCTTTAGTAGAAGTCAAGTGAAGCTACTTTATATGTGAAAGTCAATGCTGCAGGTGAGTCCTTAATTGTCTCAATTTATGTGGATGACATGCTTGTGACAGGAAGCAAAATTGAACTAATCCAAAGGTTCAAGGATGAAATGGAGAAAATCTTTGGAATGACTGATCTTGGAGTCATGAAGTACTTTCTCGGCATGGAAGTGTTGCAATCCAGTGATGGAATTTTTATATGCCAGCAGAAATACATTTCGGATATTCTAAACAGGTTCAAAATGCAAGACTGCAAACCTGTGAGTACTCCAATATCTATTGGTGTGAAGCTTGCCAAGGATGAGGATTCCGAAAAAGAGGATGATAGTATGTATAGAAGCTTAATTGGCAGTCTTCTATATCTAACCGCAAGCAGGCCTGTCATTCTATTTGTTGTTAGTTTGCTCTCTAGGTTCATGCATTCACCTAGAGACACACACCTCACAGCTGCTAAAAGAGTGTTAAGGTATATTAAAGGAACCAACAAGTTTGGAATTTTTTTCCCAAACATCTGCCGAAGTAACTATGAACTTGATCGGGTACTTTGATAGTGATTGGGGTGGTGGAGTTGATGATTCCAGAAGCACATCTGGATATCTTTTCTGTTTGGGGACAAGTTGTTTTAGTTGGAGCTCTAGAAAACAAGAAACTACAGCTCAATCAACAGCAGAAGCTGAGTACATAGCTGCTGCATCTGCTGTGAATCGAGTTATCTGGCTAAGGAAGATGATGATGGACTTAGGCCATAAGCTACCAAGATCATGTGTGACAACAGTTCAGCAGTTTCAATCTAAAAAAATCCAGTGTTTTATGGTCGAACTAAACATATCAAGATCAAGTTTCATTTTATTAGAGAAGTCCAACAATTTAATGAAGTGTTGCTTGTTCATTGTTCATCTGAGAACTAGCTAGCTGACATTTTCACCAAGTCATTGCCAAAGGAAAGGTTTGAAGATCCGAGGCAAAGAATTAGTGTTTGCCACAAAAATGCCAAGGAGGAGTGTTAGACAATTGACATTTTTTCAGCTTATTATTATTTTTACTATTTTTTACTTATTTCAATTTAGTGCTTCCTATTTTCTAGTAGACTTAGTCAACTTTAGTTGCTCAACTTTCTGAAGTTAGTGGCCCCCTTTTATGGTAGTTAGTGGCACATGTTCTTATTTAGTTTTAATGTTTATGTTTTTTCTTTGTATAAATTCAGACTTTCTGCAGATTAATATATACAAGGAATTTCATAAGTTCACTCTATTTTTATTTTTTCAAATCAGTTTCTTGAGTATTTTTGTTCTAACAGTAACTAAGTTGTGTCTGTGGGTTATTATGTCCATCTGGTCTTCTATTGCAACTTCTTATTGTCAAAATATTTGAAGAATGTGTAAGATTATCATTGTTAAGCCTCCCATTTTAAAGTCACTTATTTTTCTTGATTGAGCTAATTTTCCAACATAGTCAGTCCTGTGCTTCAGAGGTGCTCCTAGCTGTACCCTAAATAAAACTAGGAGGTCACCCAAAAAAGTAGTATAAATTGGTTCATAAGATGGATCTAGCTTCTGCACTTTGCACTGCCCTTGAAATATTTTCTTTACAAAAGATGATGCCCTGAAATTTATATGCTCTCCAATTTTTAACTGCATTATTGGATGTTTGTTAGGTTACATCAAAGCATCTCAAAGGTGGGAAAGAATCAAGAATGGATGTGCTTGTTATGGAAAATCTTCTTTTTAAGCGCAACATCACTAGACTGTATGACCTCAAAGGGTCGTCTCGATCACGCTATAATCCAGATTCAAGTGGAAGTAACAAAGTTTTACTTGATCAGAACTTGATTGAAGCAATGCCAACTTCTCCGATTTTTGTGGGAACGCAAGCTAAGCGGCTGCTGCAGAGAGCTGTGTGGAATGATACTTCATTTCTAGCGGTAAGCTTTGAAACAGCACCGATATGACTAGTAACTTCGTTAAATTGTGTTCTATAAAGAGTTCTGTATTTCTTCGTTCTAGCTGGGGTTACTAGTTTATTATTTCCTCTCTTCAATAAAGATTATAGATGATTGCTGGACCCGTCCCCCTTTTCTCCCTTTGCCACACCCGGTATCTTTTCTTTGTTTTCTAATTGTTTCTCCTTTCTTTTGCAAGATGCACTTGACCTTGTCACTGCACTAGTTCTCTCATTTGTTAGTAGGTTCTCCAAACTTTTTTGTTAGTCTATGTTAACCACCACCAAGTATACGTTGAAGTGTCCAAAGTGGGACTTCATGCTCTTCAAACACGTATTAGACGCAACTTATGTTTCAGTCCCTCCTCTGCTATATTAATAGAGTTATGGTTTTGCAGTCAATAGATGTGATGGATTACTCATTACTAGTTGGGGTGGATGAGAAGAAGCAGGAACTGGTGCTTGGTATTATTGATTTCATGAGACAGTATACGTGGGACAAGCATCTCGAGACTTGGGTAAAGGCTTCAGGTATTCTAGGTGGGCCGAAGAATGCAGCCCCAACGGTGATTTCTCCAAAGCAATACAAAATAAGATTCAGGAAAGCAATGTCTACATACTTTCTGATGGTGCCAGATGAGTGGCCTACATGAAGTGATAC</genome_strand>
        <mrna_strand>CATTAATGCTTTGCATGCCCGAATATCTTTCTCAGATGATGGCCCTCCTGGAAAGGTTAAGTACACAGTCACCTGCTATTATGCGAAGCAATTCGAGACCTTGAGAAAGTCTTGTTGCCCCAATGAATCAGACTTTATACGTTCCCTTAGCCGATGCAAAAAATGGGGTGCTCAGGGCGGGAAGAGCAATGTTTTCTTTGCCAAAACCTTGGACGACCGATTTATCATCAAGCAGGTAACGAAGACAGAGTTGGAGTCATTTATCAAGTTTGCACCAGCTTACTTTAAGTATTTATCTGACTCAATAGCTAGTGGGAGCCCAACTTGCTTGGCAAAGATTCTGGGGATCTACCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACATCAAAGCATCTCAAAGGTGGGAAAGAATCAAGAATGGATGTGCTTGTTATGGAAAATCTTCTTTTTAAGCGCAACATCACTAGACTGTATGACCTCAAAGGGTCGTCTCGATCACGCTATAATCCAGATTCAAGTGGAAGTAACAAAGTTTTACTTGATCAGAACTTGATTGAAGCAATGCCAACTTCTCCGATTTTTGTGGGAACGCAAGCTAAGCGGCTGCTGCAGAGAGCTGTGTGGAATGATACTTCATTTCTAGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................TCAATAGATGTGATGGATTACTCATTACTAGTTGGGGTGGATGAGAAGAAGCAGGAACTGGTGCTTGGTATTATTGATTTCATGAGACAGTATACGTGGGACAAGCATCTCGAGACTTGNGTAAAGGCTTCAGGTATTCTAGGTGGGCCGAAGAATGCAGCCCCAACGGTGATTTCTCC-AAGCAATACAAAATAAGATTCAGGAAAGCAATGTCTACATACTTTCTGATGGTGCCAGATGAGTGGCCTACATGAAGTGATAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E433992" ref_strand="+" ref_description="SGN-E433992 [STM-59-E12]">
      <seq>cagacttcatacgttcccttagccgatgcaaaaaatggggtgctcagggtgggaagagcaatgttttctttgccaaaaccttggacgaccgatttatcatcaagcaggtaacaaagacagagttggagtcgtttatcaagtttgcaccagcttactttaagtatttatccgactcaatagctagtgggagcccaacttgcttggcaaagattctggggatctaccaggttacgtcaaagcatctcaaaggtgggaaagaatcaagaatggatgtgcttgttatggaaaatcttctttttaagcgcaacatcactagactgtatgaccttaaagggtcgtctcgatcacgctataattcagattcaagtggaagtaacaaagttttacttgatcagaacttgattgaagcaatgccaacttctccgatttttgtgggaacgcaggctaagcggctgctgcagagggctgtgtggaatgatacttcatttctagcgtcaatagatgtgatggattactcattactagttggggtggatgaggagaagcaggaactggtgcttggtatcattgatttcatgagacagtatacgtgggacaagcatcttgagacttgggtaaaggcttcaggcattctaggtgggccgaagaatgcaaccccaacggtgatttctccaaagcaatacaaaataagattcaggaaagcaatgtctacatactttctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="22176" stop="28905"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22476" g_stop="22702" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="227" r_length="227" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22703" i_stop="27694" i_length="4992">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27695" g_stop="27961" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="494" r_length="267" r_score="0.981"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27962" i_stop="28376" i_length="415">
            <donor d_prob="0.970" d_score="0.98"/>
            <acceptor a_prob="0.981" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28377" g_stop="28605" g_length="229"/>
          <reference_exon_boundary r_type="cDNA" r_start="495" r_stop="723" r_length="229" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E433992" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>723</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E433992" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22476" e_stop="22702"/>
          <exon e_start="27695" e_stop="27961"/>
          <exon e_start="28377" e_stop="28605"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGACTTTATACGTTCCCTTAGCCGATGCAAAAAATGGGGTGCTCAGGGTGGGAAGAGCAATGTTTTCTTTGCCAAAACCTTGGACGACCGATTTATCATCAAGCAGGTAACGAAGACAGAGTTGGAGTCATTTATCAAGTTTGCACCAGCTTACTTTAAGTATTTATCTGACTCAATAGCTAGTGGGAGCCCAACTTGCTTGGCAAAGATTCTGGGGATCTACCAGGTATGCTGTATATCATTTCTAAGTAACCAAAGTCATTGTTATAATCAGTATTTTCAGCTTTCTGATATCTATGTGCAGTGGAGCACTATTATTCTGGTGAAGCAGTCTGGGGTTGTAATTGTTAGCCAATTTGGCGTTTTTTCAGCTTATTATTATTTTACTGTTTTTTACTTATTTCAATTTAGTGCTTCCTATTTTCTAGCTAGACTTAGTCAACTTTAATTGCTCAACTTTCTGAAGTTAGTGGCCCCATTATGGTTGTTAGTGGCCCCCTTTTATGGTAGTTAGTGGCACATGTTCTTATTTTAGTTTTAATGTTTATGTTTTTTACTTGTATAAATTTAGACATTCTGCAGATTAATATACACAAGGAATTTCATAAGTTCACTCTATTTTTATTTTTTCAAATCAGTTTCTTGAGTATTTTTGTTCTAATAGTGGCATCAGAGCCTCTAGTTGATCTTACAAGACAAAAAAAAAGTTTTAACCTACAACACAAATGGCATCCAACAACCTACCTTTAAATCCACCATTCACTTTCACTGGTGAAAATTACCGACTCGGGTCTGTGAAGATGCAAGCTTTTTTGGAAGCCTATAAACTTTGGGAAATCATGACGGAAGATAAACCACTTGCTGCTCTACCAGCAAATCCTACCTTGGCTCAGATCAAATCCAACAACGAAGAGAAGACAAAGAAATCTAAAGCCAAGTCGCTTATGCAGAATGCTGTGGCAGATACTGTGTTTTACAGAATCATGGCTTGCAAAGCTGCAAAAGAGACTTGGGATAGGTTGAAAGAAGAATATCAAGGCAGCGATAGAACACATCAAATGCAAGTGGAACCTAAAAAGAGAGTTTGAGTCTTTGAATATGCAGGAGGATGAAACTATTAGTAAGTATGCTGATCGAATATCCTTAATTGTTAATAACATTAGACTTTTTGGTGAAGAATTTACAGACAAACGAATTGTGGAGAAAGTTCTTGTGACTCTTCCTGAGAGATTTGAATCTAAGATTTCCTCTCTTGAAGAATCCAAGGACCTGAGCAAACTTTCATTAGGTGAACTAATGAGTGCTCTTCAAGCTCAAGAGCAAAGGAGGACTATGAGACGGGAAAAGTTCATTGAAGGAGCTTTCTCTGTACAAAAGCAAAAAGGAAAGCAACAATTCCACCAAAAGAATAAGGGCAAGCATGATTGAGGAAACAATAGTGGAGATGTGAAGCAGAAGTTCCCTCCTTGCAAACATTGTAAAAGAAATACACATCTGGAGAAGTATTGTTGGTGGAGAGTCGATGCTATATGTGGCAATTGTAAGTAGACGGGACACGTATCCAAGGTTTGCAAATCAAGAGCAAAGGCCTCTGGTGCTTTGCAAGAACAAGTAGCAGAAACTGACGATGCACATGAAGAGCAACTATTTGCAGTTTCCTACTTTTCAATCAGTGAATCCTCTGATTCATGGCTTCTTGACAGTGGTTGCACAAATCACTTGTGCAACAAACTACTCAAATTCCTAGATGATACTTACAAATCTAAAGTAAAAGTGGGAAACAGTGAGGCAGTAGAAGTCAAAGGCAGAGGTACAGTGTCTATCTCAACAATATCAGGTATCAAAACTATTTCTGATGTTTTGTACACACCTGATATGAGTCAAAATTTGTTGAGTGTTGGACAGATGCTTGAAAATAATTATTCTCTGTATTTTAAGAATCGTGAATGTGTTGTTTCCGACCCTTCTGGAGTAGAGTTATTCTATGTCAAGATGAGCAACATAATGTTTTCAATTGATTGGGAGAAAATAACAGAGCAGGCTTACACTATTACTTCACAAACATGTACAAACCTATGGCACAAAATACAAACCTATGGCACAAAAGGTTTGGTCACTTCAATCTGAGAAGCATCGCCGAGATGAAAAAGAAGGAGCTAGTGGAAAATATGCCTGAATTTCTTTCTAATGCTCAAGTTTGTGAAACTTGCCAACAGGGAAAGCAACCAAAATTGCCATTTCAAGCAAATCAAGTACGAAGAGCTAACCAGAAACTTCAGCTCATTCATATGGATGTTTGCGGCCCAATGAAAACAGATTCGTTGAGTGGTAACAGATACTTTCTCCTCTTTATTGATGACTACAACAGAATGTGTTGGGTTTATTTCATAAGACTGAAGAGTGAAGTCTTTGATGTTTTTAAACAATTTAAAGCTTTAGTAGAAAATCAATGTAATCTTAGTATTAAGGCTTTAAGGTCTGACAATGGAGGAGAATACACTTCTTCTCAATTTGTGGAAAACAAGGTCTGACAACAGAGGAGAATACACTTCTTCTCAATTTGTGGAGTTTTGTAATAGCACAGGTATTGAACGCCAATTGACATTACCATACACTCCACAACTAAATGGCGTGTGAGAAAGGAAGAACAGGACAGTAATGGAGATGGCCATATGTCTTTTGCTCGAAAGAAAGATCCCAAATCAGTTTTGGGCTGAGGCAGTCAATATCTTTGTATATTTGCTGAACAGATTGCCTACTAAGGCCTTGCAGGACATGACTCCATATGAAGCTTGGTGTGGGAACAAACCATCAATACACCATCTCAGAATCTTTGGGTGTATATGTTATTATCGAGTTCCAGAAACAAAAAGGAGTAAGCTGGATAACAAGGCTTATAAAGGCATATTTATGGGCTATAGTTCATCCAAAGGTTACAAAATTTTCTGTTTTAAATCAGACAAACTAATTCTCAGCCGAGAAGTGAAGTTTGATGAAGCAGTTGGTTGGGATTGGATCAGAAGACCTCTTATTCTGATTCATTTTCAATAGAGCAGCCTCAACTTTCAGAAGATGAACTAGTGGATGATGTACCAGTGAGGGGAACTCGATCCTTAAAAGATGTCTATCAGCGGTATAACTTGGTTAGCTCTGAACCAACAAGCTATGCTGAAGCACAAGACTCTCAGGCATGGAGAAGAGCTATGCAAGAAGAACTAGACATGATCGAGAAGAATGGAACCTGACAGCTTGTTGACAGACCTAGAAATCGCAAGGTAATTGGTGTAAAATGGATTTTAAGACAAAACTCAATCCTGATGGAACAATTTGCAAACATAAGGCTAGATTGGTGGTGAAGGGATATGCACAACAATATGTGTGGATTACCAGGAAACATTTGCTCTTGTAGCAAGGTTTGCTTGCTCAACTACTGGAAAAGAGGATCAAGTTTATCTCTTAACAAAGGCTTTGTATGGCCTAAAACAAGCCCGAAGGGCATGGTATGAGAGGATGGACAATCATCTCATCCAACTTGGCTTTAGTAGAAGTCAAGTGAAGCTACTTTATATGTGAAAGTCAATGCTGCAGGTGAGTCCTTAATTGTCTCAATTTATGTGGATGACATGCTTGTGACAGGAAGCAAAATTGAACTAATCCAAAGGTTCAAGGATGAAATGGAGAAAATCTTTGGAATGACTGATCTTGGAGTCATGAAGTACTTTCTCGGCATGGAAGTGTTGCAATCCAGTGATGGAATTTTTATATGCCAGCAGAAATACATTTCGGATATTCTAAACAGGTTCAAAATGCAAGACTGCAAACCTGTGAGTACTCCAATATCTATTGGTGTGAAGCTTGCCAAGGATGAGGATTCCGAAAAAGAGGATGATAGTATGTATAGAAGCTTAATTGGCAGTCTTCTATATCTAACCGCAAGCAGGCCTGTCATTCTATTTGTTGTTAGTTTGCTCTCTAGGTTCATGCATTCACCTAGAGACACACACCTCACAGCTGCTAAAAGAGTGTTAAGGTATATTAAAGGAACCAACAAGTTTGGAATTTTTTTCCCAAACATCTGCCGAAGTAACTATGAACTTGATCGGGTACTTTGATAGTGATTGGGGTGGTGGAGTTGATGATTCCAGAAGCACATCTGGATATCTTTTCTGTTTGGGGACAAGTTGTTTTAGTTGGAGCTCTAGAAAACAAGAAACTACAGCTCAATCAACAGCAGAAGCTGAGTACATAGCTGCTGCATCTGCTGTGAATCGAGTTATCTGGCTAAGGAAGATGATGATGGACTTAGGCCATAAGCTACCAAGATCATGTGTGACAACAGTTCAGCAGTTTCAATCTAAAAAAATCCAGTGTTTTATGGTCGAACTAAACATATCAAGATCAAGTTTCATTTTATTAGAGAAGTCCAACAATTTAATGAAGTGTTGCTTGTTCATTGTTCATCTGAGAACTAGCTAGCTGACATTTTCACCAAGTCATTGCCAAAGGAAAGGTTTGAAGATCCGAGGCAAAGAATTAGTGTTTGCCACAAAAATGCCAAGGAGGAGTGTTAGACAATTGACATTTTTTCAGCTTATTATTATTTTTACTATTTTTTACTTATTTCAATTTAGTGCTTCCTATTTTCTAGTAGACTTAGTCAACTTTAGTTGCTCAACTTTCTGAAGTTAGTGGCCCCCTTTTATGGTAGTTAGTGGCACATGTTCTTATTTAGTTTTAATGTTTATGTTTTTTCTTTGTATAAATTCAGACTTTCTGCAGATTAATATATACAAGGAATTTCATAAGTTCACTCTATTTTTATTTTTTCAAATCAGTTTCTTGAGTATTTTTGTTCTAACAGTAACTAAGTTGTGTCTGTGGGTTATTATGTCCATCTGGTCTTCTATTGCAACTTCTTATTGTCAAAATATTTGAAGAATGTGTAAGATTATCATTGTTAAGCCTCCCATTTTAAAGTCACTTATTTTTCTTGATTGAGCTAATTTTCCAACATAGTCAGTCCTGTGCTTCAGAGGTGCTCCTAGCTGTACCCTAAATAAAACTAGGAGGTCACCCAAAAAAGTAGTATAAATTGGTTCATAAGATGGATCTAGCTTCTGCACTTTGCACTGCCCTTGAAATATTTTCTTTACAAAAGATGATGCCCTGAAATTTATATGCTCTCCAATTTTTAACTGCATTATTGGATGTTTGTTAGGTTACATCAAAGCATCTCAAAGGTGGGAAAGAATCAAGAATGGATGTGCTTGTTATGGAAAATCTTCTTTTTAAGCGCAACATCACTAGACTGTATGACCTCAAAGGGTCGTCTCGATCACGCTATAATCCAGATTCAAGTGGAAGTAACAAAGTTTTACTTGATCAGAACTTGATTGAAGCAATGCCAACTTCTCCGATTTTTGTGGGAACGCAAGCTAAGCGGCTGCTGCAGAGAGCTGTGTGGAATGATACTTCATTTCTAGCGGTAAGCTTTGAAACAGCACCGATATGACTAGTAACTTCGTTAAATTGTGTTCTATAAAGAGTTCTGTATTTCTTCGTTCTAGCTGGGGTTACTAGTTTATTATTTCCTCTCTTCAATAAAGATTATAGATGATTGCTGGACCCGTCCCCCTTTTCTCCCTTTGCCACACCCGGTATCTTTTCTTTGTTTTCTAATTGTTTCTCCTTTCTTTTGCAAGATGCACTTGACCTTGTCACTGCACTAGTTCTCTCATTTGTTAGTAGGTTCTCCAAACTTTTTTGTTAGTCTATGTTAACCACCACCAAGTATACGTTGAAGTGTCCAAAGTGGGACTTCATGCTCTTCAAACACGTATTAGACGCAACTTATGTTTCAGTCCCTCCTCTGCTATATTAATAGAGTTATGGTTTTGCAGTCAATAGATGTGATGGATTACTCATTACTAGTTGGGGTGGATGAGAAGAAGCAGGAACTGGTGCTTGGTATTATTGATTTCATGAGACAGTATACGTGGGACAAGCATCTCGAGACTTGGGTAAAGGCTTCAGGTATTCTAGGTGGGCCGAAGAATGCAGCCCCAACGGTGATTTCTCCAAAGCAATACAAAATAAGATTCAGGAAAGCAATGTCTACATACTTTCTGA</genome_strand>
        <mrna_strand>CAGACTTCATACGTTCCCTTAGCCGATGCAAAAAATGGGGTGCTCAGGGTGGGAAGAGCAATGTTTTCTTTGCCAAAACCTTGGACGACCGATTTATCATCAAGCAGGTAACAAAGACAGAGTTGGAGTCGTTTATCAAGTTTGCACCAGCTTACTTTAAGTATTTATCCGACTCAATAGCTAGTGGGAGCCCAACTTGCTTGGCAAAGATTCTGGGGATCTACCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACGTCAAAGCATCTCAAAGGTGGGAAAGAATCAAGAATGGATGTGCTTGTTATGGAAAATCTTCTTTTTAAGCGCAACATCACTAGACTGTATGACCTTAAAGGGTCGTCTCGATCACGCTATAATTCAGATTCAAGTGGAAGTAACAAAGTTTTACTTGATCAGAACTTGATTGAAGCAATGCCAACTTCTCCGATTTTTGTGGGAACGCAGGCTAAGCGGCTGCTGCAGAGGGCTGTGTGGAATGATACTTCATTTCTAGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................TCAATAGATGTGATGGATTACTCATTACTAGTTGGGGTGGATGAGGAGAAGCAGGAACTGGTGCTTGGTATCATTGATTTCATGAGACAGTATACGTGGGACAAGCATCTTGAGACTTGGGTAAAGGCTTCAGGCATTCTAGGTGGGCCGAAGAATGCAACCCCAACGGTGATTTCTCCAAAGCAATACAAAATAAGATTCAGGAAAGCAATGTCTACATACTTTCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E404541" ref_strand="+" ref_description="SGN-E404541 [PPC-14-K4]">
      <seq>cagacttcatacgttcccttagccgatgcaaaaaatggggtgctcagggtgggaagagcaatgttttctttgccaaaaccttggacgaccgatttatcatcaagcaggtaacaaagacagagttggagtcgtttatcaagtttgcaccagcttactttaagtatttatccgactcaatagctagtgggagcccaacttgcttggcaaagattctggggatctaccaggttacgtcaaagcatctcaaaggtgggaaagaatcaagaatggatgtgcttgttatggaaaatcttctttttaagcgcaacatcactagactgtatgaccttaaagggtcgtctcgatcacgctataattcagattcaagtggaagtaacaaagttttacttgatcagaacttgattgaagcaatgccaacttctccgatttttgtgggaacgcaggctaagcggctgctgcagagggctgtgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="22176" stop="28238"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22476" g_stop="22702" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="227" r_length="227" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22703" i_stop="27694" i_length="4992">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27695" g_stop="27938" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="471" r_length="244" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E404541" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>471</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E404541" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22476" e_stop="22702"/>
          <exon e_start="27695" e_stop="27938"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGACTTTATACGTTCCCTTAGCCGATGCAAAAAATGGGGTGCTCAGGGTGGGAAGAGCAATGTTTTCTTTGCCAAAACCTTGGACGACCGATTTATCATCAAGCAGGTAACGAAGACAGAGTTGGAGTCATTTATCAAGTTTGCACCAGCTTACTTTAAGTATTTATCTGACTCAATAGCTAGTGGGAGCCCAACTTGCTTGGCAAAGATTCTGGGGATCTACCAGGTATGCTGTATATCATTTCTAAGTAACCAAAGTCATTGTTATAATCAGTATTTTCAGCTTTCTGATATCTATGTGCAGTGGAGCACTATTATTCTGGTGAAGCAGTCTGGGGTTGTAATTGTTAGCCAATTTGGCGTTTTTTCAGCTTATTATTATTTTACTGTTTTTTACTTATTTCAATTTAGTGCTTCCTATTTTCTAGCTAGACTTAGTCAACTTTAATTGCTCAACTTTCTGAAGTTAGTGGCCCCATTATGGTTGTTAGTGGCCCCCTTTTATGGTAGTTAGTGGCACATGTTCTTATTTTAGTTTTAATGTTTATGTTTTTTACTTGTATAAATTTAGACATTCTGCAGATTAATATACACAAGGAATTTCATAAGTTCACTCTATTTTTATTTTTTCAAATCAGTTTCTTGAGTATTTTTGTTCTAATAGTGGCATCAGAGCCTCTAGTTGATCTTACAAGACAAAAAAAAAGTTTTAACCTACAACACAAATGGCATCCAACAACCTACCTTTAAATCCACCATTCACTTTCACTGGTGAAAATTACCGACTCGGGTCTGTGAAGATGCAAGCTTTTTTGGAAGCCTATAAACTTTGGGAAATCATGACGGAAGATAAACCACTTGCTGCTCTACCAGCAAATCCTACCTTGGCTCAGATCAAATCCAACAACGAAGAGAAGACAAAGAAATCTAAAGCCAAGTCGCTTATGCAGAATGCTGTGGCAGATACTGTGTTTTACAGAATCATGGCTTGCAAAGCTGCAAAAGAGACTTGGGATAGGTTGAAAGAAGAATATCAAGGCAGCGATAGAACACATCAAATGCAAGTGGAACCTAAAAAGAGAGTTTGAGTCTTTGAATATGCAGGAGGATGAAACTATTAGTAAGTATGCTGATCGAATATCCTTAATTGTTAATAACATTAGACTTTTTGGTGAAGAATTTACAGACAAACGAATTGTGGAGAAAGTTCTTGTGACTCTTCCTGAGAGATTTGAATCTAAGATTTCCTCTCTTGAAGAATCCAAGGACCTGAGCAAACTTTCATTAGGTGAACTAATGAGTGCTCTTCAAGCTCAAGAGCAAAGGAGGACTATGAGACGGGAAAAGTTCATTGAAGGAGCTTTCTCTGTACAAAAGCAAAAAGGAAAGCAACAATTCCACCAAAAGAATAAGGGCAAGCATGATTGAGGAAACAATAGTGGAGATGTGAAGCAGAAGTTCCCTCCTTGCAAACATTGTAAAAGAAATACACATCTGGAGAAGTATTGTTGGTGGAGAGTCGATGCTATATGTGGCAATTGTAAGTAGACGGGACACGTATCCAAGGTTTGCAAATCAAGAGCAAAGGCCTCTGGTGCTTTGCAAGAACAAGTAGCAGAAACTGACGATGCACATGAAGAGCAACTATTTGCAGTTTCCTACTTTTCAATCAGTGAATCCTCTGATTCATGGCTTCTTGACAGTGGTTGCACAAATCACTTGTGCAACAAACTACTCAAATTCCTAGATGATACTTACAAATCTAAAGTAAAAGTGGGAAACAGTGAGGCAGTAGAAGTCAAAGGCAGAGGTACAGTGTCTATCTCAACAATATCAGGTATCAAAACTATTTCTGATGTTTTGTACACACCTGATATGAGTCAAAATTTGTTGAGTGTTGGACAGATGCTTGAAAATAATTATTCTCTGTATTTTAAGAATCGTGAATGTGTTGTTTCCGACCCTTCTGGAGTAGAGTTATTCTATGTCAAGATGAGCAACATAATGTTTTCAATTGATTGGGAGAAAATAACAGAGCAGGCTTACACTATTACTTCACAAACATGTACAAACCTATGGCACAAAATACAAACCTATGGCACAAAAGGTTTGGTCACTTCAATCTGAGAAGCATCGCCGAGATGAAAAAGAAGGAGCTAGTGGAAAATATGCCTGAATTTCTTTCTAATGCTCAAGTTTGTGAAACTTGCCAACAGGGAAAGCAACCAAAATTGCCATTTCAAGCAAATCAAGTACGAAGAGCTAACCAGAAACTTCAGCTCATTCATATGGATGTTTGCGGCCCAATGAAAACAGATTCGTTGAGTGGTAACAGATACTTTCTCCTCTTTATTGATGACTACAACAGAATGTGTTGGGTTTATTTCATAAGACTGAAGAGTGAAGTCTTTGATGTTTTTAAACAATTTAAAGCTTTAGTAGAAAATCAATGTAATCTTAGTATTAAGGCTTTAAGGTCTGACAATGGAGGAGAATACACTTCTTCTCAATTTGTGGAAAACAAGGTCTGACAACAGAGGAGAATACACTTCTTCTCAATTTGTGGAGTTTTGTAATAGCACAGGTATTGAACGCCAATTGACATTACCATACACTCCACAACTAAATGGCGTGTGAGAAAGGAAGAACAGGACAGTAATGGAGATGGCCATATGTCTTTTGCTCGAAAGAAAGATCCCAAATCAGTTTTGGGCTGAGGCAGTCAATATCTTTGTATATTTGCTGAACAGATTGCCTACTAAGGCCTTGCAGGACATGACTCCATATGAAGCTTGGTGTGGGAACAAACCATCAATACACCATCTCAGAATCTTTGGGTGTATATGTTATTATCGAGTTCCAGAAACAAAAAGGAGTAAGCTGGATAACAAGGCTTATAAAGGCATATTTATGGGCTATAGTTCATCCAAAGGTTACAAAATTTTCTGTTTTAAATCAGACAAACTAATTCTCAGCCGAGAAGTGAAGTTTGATGAAGCAGTTGGTTGGGATTGGATCAGAAGACCTCTTATTCTGATTCATTTTCAATAGAGCAGCCTCAACTTTCAGAAGATGAACTAGTGGATGATGTACCAGTGAGGGGAACTCGATCCTTAAAAGATGTCTATCAGCGGTATAACTTGGTTAGCTCTGAACCAACAAGCTATGCTGAAGCACAAGACTCTCAGGCATGGAGAAGAGCTATGCAAGAAGAACTAGACATGATCGAGAAGAATGGAACCTGACAGCTTGTTGACAGACCTAGAAATCGCAAGGTAATTGGTGTAAAATGGATTTTAAGACAAAACTCAATCCTGATGGAACAATTTGCAAACATAAGGCTAGATTGGTGGTGAAGGGATATGCACAACAATATGTGTGGATTACCAGGAAACATTTGCTCTTGTAGCAAGGTTTGCTTGCTCAACTACTGGAAAAGAGGATCAAGTTTATCTCTTAACAAAGGCTTTGTATGGCCTAAAACAAGCCCGAAGGGCATGGTATGAGAGGATGGACAATCATCTCATCCAACTTGGCTTTAGTAGAAGTCAAGTGAAGCTACTTTATATGTGAAAGTCAATGCTGCAGGTGAGTCCTTAATTGTCTCAATTTATGTGGATGACATGCTTGTGACAGGAAGCAAAATTGAACTAATCCAAAGGTTCAAGGATGAAATGGAGAAAATCTTTGGAATGACTGATCTTGGAGTCATGAAGTACTTTCTCGGCATGGAAGTGTTGCAATCCAGTGATGGAATTTTTATATGCCAGCAGAAATACATTTCGGATATTCTAAACAGGTTCAAAATGCAAGACTGCAAACCTGTGAGTACTCCAATATCTATTGGTGTGAAGCTTGCCAAGGATGAGGATTCCGAAAAAGAGGATGATAGTATGTATAGAAGCTTAATTGGCAGTCTTCTATATCTAACCGCAAGCAGGCCTGTCATTCTATTTGTTGTTAGTTTGCTCTCTAGGTTCATGCATTCACCTAGAGACACACACCTCACAGCTGCTAAAAGAGTGTTAAGGTATATTAAAGGAACCAACAAGTTTGGAATTTTTTTCCCAAACATCTGCCGAAGTAACTATGAACTTGATCGGGTACTTTGATAGTGATTGGGGTGGTGGAGTTGATGATTCCAGAAGCACATCTGGATATCTTTTCTGTTTGGGGACAAGTTGTTTTAGTTGGAGCTCTAGAAAACAAGAAACTACAGCTCAATCAACAGCAGAAGCTGAGTACATAGCTGCTGCATCTGCTGTGAATCGAGTTATCTGGCTAAGGAAGATGATGATGGACTTAGGCCATAAGCTACCAAGATCATGTGTGACAACAGTTCAGCAGTTTCAATCTAAAAAAATCCAGTGTTTTATGGTCGAACTAAACATATCAAGATCAAGTTTCATTTTATTAGAGAAGTCCAACAATTTAATGAAGTGTTGCTTGTTCATTGTTCATCTGAGAACTAGCTAGCTGACATTTTCACCAAGTCATTGCCAAAGGAAAGGTTTGAAGATCCGAGGCAAAGAATTAGTGTTTGCCACAAAAATGCCAAGGAGGAGTGTTAGACAATTGACATTTTTTCAGCTTATTATTATTTTTACTATTTTTTACTTATTTCAATTTAGTGCTTCCTATTTTCTAGTAGACTTAGTCAACTTTAGTTGCTCAACTTTCTGAAGTTAGTGGCCCCCTTTTATGGTAGTTAGTGGCACATGTTCTTATTTAGTTTTAATGTTTATGTTTTTTCTTTGTATAAATTCAGACTTTCTGCAGATTAATATATACAAGGAATTTCATAAGTTCACTCTATTTTTATTTTTTCAAATCAGTTTCTTGAGTATTTTTGTTCTAACAGTAACTAAGTTGTGTCTGTGGGTTATTATGTCCATCTGGTCTTCTATTGCAACTTCTTATTGTCAAAATATTTGAAGAATGTGTAAGATTATCATTGTTAAGCCTCCCATTTTAAAGTCACTTATTTTTCTTGATTGAGCTAATTTTCCAACATAGTCAGTCCTGTGCTTCAGAGGTGCTCCTAGCTGTACCCTAAATAAAACTAGGAGGTCACCCAAAAAAGTAGTATAAATTGGTTCATAAGATGGATCTAGCTTCTGCACTTTGCACTGCCCTTGAAATATTTTCTTTACAAAAGATGATGCCCTGAAATTTATATGCTCTCCAATTTTTAACTGCATTATTGGATGTTTGTTAGGTTACATCAAAGCATCTCAAAGGTGGGAAAGAATCAAGAATGGATGTGCTTGTTATGGAAAATCTTCTTTTTAAGCGCAACATCACTAGACTGTATGACCTCAAAGGGTCGTCTCGATCACGCTATAATCCAGATTCAAGTGGAAGTAACAAAGTTTTACTTGATCAGAACTTGATTGAAGCAATGCCAACTTCTCCGATTTTTGTGGGAACGCAAGCTAAGCGGCTGCTGCAGAGAGCTGTGT</genome_strand>
        <mrna_strand>CAGACTTCATACGTTCCCTTAGCCGATGCAAAAAATGGGGTGCTCAGGGTGGGAAGAGCAATGTTTTCTTTGCCAAAACCTTGGACGACCGATTTATCATCAAGCAGGTAACAAAGACAGAGTTGGAGTCGTTTATCAAGTTTGCACCAGCTTACTTTAAGTATTTATCCGACTCAATAGCTAGTGGGAGCCCAACTTGCTTGGCAAAGATTCTGGGGATCTACCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACGTCAAAGCATCTCAAAGGTGGGAAAGAATCAAGAATGGATGTGCTTGTTATGGAAAATCTTCTTTTTAAGCGCAACATCACTAGACTGTATGACCTTAAAGGGTCGTCTCGATCACGCTATAATTCAGATTCAAGTGGAAGTAACAAAGTTTTACTTGATCAGAACTTGATTGAAGCAATGCCAACTTCTCCGATTTTTGTGGGAACGCAGGCTAAGCGGCTGCTGCAGAGGGCTGTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E699849" ref_strand="+" ref_description="SGN-E699849 [FA11BE10]">
      <seq>acttgcttggcaaagattctggggatctaccaggttacatcaaagcatctcaaaggtgggaaagaatcaagaatggatgtgcttgttatggaaaatcttctttttaagcgcaacatcactagactgtatgacctcaaagggtcgtctcgatcacgctataatccagattcaagtggaagtaacaaagttttacttgatcagaacttgattgaagcaatgccaacttctccgatttttgtgggaacgcaagctaagcggctgctgcagagagctgtgtggaatgatacttcatttctagcgtcaatagatgtgatggattactcattactagttggggtggatgagaagaagcaggaactggtgcttggtattattgatttcatgagacagtatacgtgggacaagcatctcgagacttgggtaaaggcttcaggtattctaggtgggccgaagaatgcagccccaacggtgatttctccaaagcaatacaaaataagattcaggaaagcaatgtctacatactttctgatggtgccagatgagtggcctacatgaagtgataccccaagtatcagtgcagaaaaattgccccggccggtcttggtataattttatccatcctttcttatgccatcaagttttgtgtattttgtgcaggaatgttgggtagttgctttatcattagaggattacttttgtttttccaaagtagtagtattacagagttatttccatacaaagaatttgttagtttctgggcgttccgccagttgtacagtcaatagtcggtcttcgtttctttttatcccacattctgatgctcaatggaagctcttggtatattcatgtgtttacatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="22370" stop="29234"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22670" g_stop="22702" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="33" r_length="33" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22703" i_stop="27694" i_length="4992">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27695" g_stop="27961" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="34" r_stop="300" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27962" i_stop="28376" i_length="415">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28377" g_stop="28934" g_length="558"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="858" r_length="558" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E699849" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>858</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E699849" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22670" e_stop="22702"/>
          <exon e_start="27695" e_stop="27961"/>
          <exon e_start="28377" e_stop="28934"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTTGCTTGGCAAAGATTCTGGGGATCTACCAGGTATGCTGTATATCATTTCTAAGTAACCAAAGTCATTGTTATAATCAGTATTTTCAGCTTTCTGATATCTATGTGCAGTGGAGCACTATTATTCTGGTGAAGCAGTCTGGGGTTGTAATTGTTAGCCAATTTGGCGTTTTTTCAGCTTATTATTATTTTACTGTTTTTTACTTATTTCAATTTAGTGCTTCCTATTTTCTAGCTAGACTTAGTCAACTTTAATTGCTCAACTTTCTGAAGTTAGTGGCCCCATTATGGTTGTTAGTGGCCCCCTTTTATGGTAGTTAGTGGCACATGTTCTTATTTTAGTTTTAATGTTTATGTTTTTTACTTGTATAAATTTAGACATTCTGCAGATTAATATACACAAGGAATTTCATAAGTTCACTCTATTTTTATTTTTTCAAATCAGTTTCTTGAGTATTTTTGTTCTAATAGTGGCATCAGAGCCTCTAGTTGATCTTACAAGACAAAAAAAAAGTTTTAACCTACAACACAAATGGCATCCAACAACCTACCTTTAAATCCACCATTCACTTTCACTGGTGAAAATTACCGACTCGGGTCTGTGAAGATGCAAGCTTTTTTGGAAGCCTATAAACTTTGGGAAATCATGACGGAAGATAAACCACTTGCTGCTCTACCAGCAAATCCTACCTTGGCTCAGATCAAATCCAACAACGAAGAGAAGACAAAGAAATCTAAAGCCAAGTCGCTTATGCAGAATGCTGTGGCAGATACTGTGTTTTACAGAATCATGGCTTGCAAAGCTGCAAAAGAGACTTGGGATAGGTTGAAAGAAGAATATCAAGGCAGCGATAGAACACATCAAATGCAAGTGGAACCTAAAAAGAGAGTTTGAGTCTTTGAATATGCAGGAGGATGAAACTATTAGTAAGTATGCTGATCGAATATCCTTAATTGTTAATAACATTAGACTTTTTGGTGAAGAATTTACAGACAAACGAATTGTGGAGAAAGTTCTTGTGACTCTTCCTGAGAGATTTGAATCTAAGATTTCCTCTCTTGAAGAATCCAAGGACCTGAGCAAACTTTCATTAGGTGAACTAATGAGTGCTCTTCAAGCTCAAGAGCAAAGGAGGACTATGAGACGGGAAAAGTTCATTGAAGGAGCTTTCTCTGTACAAAAGCAAAAAGGAAAGCAACAATTCCACCAAAAGAATAAGGGCAAGCATGATTGAGGAAACAATAGTGGAGATGTGAAGCAGAAGTTCCCTCCTTGCAAACATTGTAAAAGAAATACACATCTGGAGAAGTATTGTTGGTGGAGAGTCGATGCTATATGTGGCAATTGTAAGTAGACGGGACACGTATCCAAGGTTTGCAAATCAAGAGCAAAGGCCTCTGGTGCTTTGCAAGAACAAGTAGCAGAAACTGACGATGCACATGAAGAGCAACTATTTGCAGTTTCCTACTTTTCAATCAGTGAATCCTCTGATTCATGGCTTCTTGACAGTGGTTGCACAAATCACTTGTGCAACAAACTACTCAAATTCCTAGATGATACTTACAAATCTAAAGTAAAAGTGGGAAACAGTGAGGCAGTAGAAGTCAAAGGCAGAGGTACAGTGTCTATCTCAACAATATCAGGTATCAAAACTATTTCTGATGTTTTGTACACACCTGATATGAGTCAAAATTTGTTGAGTGTTGGACAGATGCTTGAAAATAATTATTCTCTGTATTTTAAGAATCGTGAATGTGTTGTTTCCGACCCTTCTGGAGTAGAGTTATTCTATGTCAAGATGAGCAACATAATGTTTTCAATTGATTGGGAGAAAATAACAGAGCAGGCTTACACTATTACTTCACAAACATGTACAAACCTATGGCACAAAATACAAACCTATGGCACAAAAGGTTTGGTCACTTCAATCTGAGAAGCATCGCCGAGATGAAAAAGAAGGAGCTAGTGGAAAATATGCCTGAATTTCTTTCTAATGCTCAAGTTTGTGAAACTTGCCAACAGGGAAAGCAACCAAAATTGCCATTTCAAGCAAATCAAGTACGAAGAGCTAACCAGAAACTTCAGCTCATTCATATGGATGTTTGCGGCCCAATGAAAACAGATTCGTTGAGTGGTAACAGATACTTTCTCCTCTTTATTGATGACTACAACAGAATGTGTTGGGTTTATTTCATAAGACTGAAGAGTGAAGTCTTTGATGTTTTTAAACAATTTAAAGCTTTAGTAGAAAATCAATGTAATCTTAGTATTAAGGCTTTAAGGTCTGACAATGGAGGAGAATACACTTCTTCTCAATTTGTGGAAAACAAGGTCTGACAACAGAGGAGAATACACTTCTTCTCAATTTGTGGAGTTTTGTAATAGCACAGGTATTGAACGCCAATTGACATTACCATACACTCCACAACTAAATGGCGTGTGAGAAAGGAAGAACAGGACAGTAATGGAGATGGCCATATGTCTTTTGCTCGAAAGAAAGATCCCAAATCAGTTTTGGGCTGAGGCAGTCAATATCTTTGTATATTTGCTGAACAGATTGCCTACTAAGGCCTTGCAGGACATGACTCCATATGAAGCTTGGTGTGGGAACAAACCATCAATACACCATCTCAGAATCTTTGGGTGTATATGTTATTATCGAGTTCCAGAAACAAAAAGGAGTAAGCTGGATAACAAGGCTTATAAAGGCATATTTATGGGCTATAGTTCATCCAAAGGTTACAAAATTTTCTGTTTTAAATCAGACAAACTAATTCTCAGCCGAGAAGTGAAGTTTGATGAAGCAGTTGGTTGGGATTGGATCAGAAGACCTCTTATTCTGATTCATTTTCAATAGAGCAGCCTCAACTTTCAGAAGATGAACTAGTGGATGATGTACCAGTGAGGGGAACTCGATCCTTAAAAGATGTCTATCAGCGGTATAACTTGGTTAGCTCTGAACCAACAAGCTATGCTGAAGCACAAGACTCTCAGGCATGGAGAAGAGCTATGCAAGAAGAACTAGACATGATCGAGAAGAATGGAACCTGACAGCTTGTTGACAGACCTAGAAATCGCAAGGTAATTGGTGTAAAATGGATTTTAAGACAAAACTCAATCCTGATGGAACAATTTGCAAACATAAGGCTAGATTGGTGGTGAAGGGATATGCACAACAATATGTGTGGATTACCAGGAAACATTTGCTCTTGTAGCAAGGTTTGCTTGCTCAACTACTGGAAAAGAGGATCAAGTTTATCTCTTAACAAAGGCTTTGTATGGCCTAAAACAAGCCCGAAGGGCATGGTATGAGAGGATGGACAATCATCTCATCCAACTTGGCTTTAGTAGAAGTCAAGTGAAGCTACTTTATATGTGAAAGTCAATGCTGCAGGTGAGTCCTTAATTGTCTCAATTTATGTGGATGACATGCTTGTGACAGGAAGCAAAATTGAACTAATCCAAAGGTTCAAGGATGAAATGGAGAAAATCTTTGGAATGACTGATCTTGGAGTCATGAAGTACTTTCTCGGCATGGAAGTGTTGCAATCCAGTGATGGAATTTTTATATGCCAGCAGAAATACATTTCGGATATTCTAAACAGGTTCAAAATGCAAGACTGCAAACCTGTGAGTACTCCAATATCTATTGGTGTGAAGCTTGCCAAGGATGAGGATTCCGAAAAAGAGGATGATAGTATGTATAGAAGCTTAATTGGCAGTCTTCTATATCTAACCGCAAGCAGGCCTGTCATTCTATTTGTTGTTAGTTTGCTCTCTAGGTTCATGCATTCACCTAGAGACACACACCTCACAGCTGCTAAAAGAGTGTTAAGGTATATTAAAGGAACCAACAAGTTTGGAATTTTTTTCCCAAACATCTGCCGAAGTAACTATGAACTTGATCGGGTACTTTGATAGTGATTGGGGTGGTGGAGTTGATGATTCCAGAAGCACATCTGGATATCTTTTCTGTTTGGGGACAAGTTGTTTTAGTTGGAGCTCTAGAAAACAAGAAACTACAGCTCAATCAACAGCAGAAGCTGAGTACATAGCTGCTGCATCTGCTGTGAATCGAGTTATCTGGCTAAGGAAGATGATGATGGACTTAGGCCATAAGCTACCAAGATCATGTGTGACAACAGTTCAGCAGTTTCAATCTAAAAAAATCCAGTGTTTTATGGTCGAACTAAACATATCAAGATCAAGTTTCATTTTATTAGAGAAGTCCAACAATTTAATGAAGTGTTGCTTGTTCATTGTTCATCTGAGAACTAGCTAGCTGACATTTTCACCAAGTCATTGCCAAAGGAAAGGTTTGAAGATCCGAGGCAAAGAATTAGTGTTTGCCACAAAAATGCCAAGGAGGAGTGTTAGACAATTGACATTTTTTCAGCTTATTATTATTTTTACTATTTTTTACTTATTTCAATTTAGTGCTTCCTATTTTCTAGTAGACTTAGTCAACTTTAGTTGCTCAACTTTCTGAAGTTAGTGGCCCCCTTTTATGGTAGTTAGTGGCACATGTTCTTATTTAGTTTTAATGTTTATGTTTTTTCTTTGTATAAATTCAGACTTTCTGCAGATTAATATATACAAGGAATTTCATAAGTTCACTCTATTTTTATTTTTTCAAATCAGTTTCTTGAGTATTTTTGTTCTAACAGTAACTAAGTTGTGTCTGTGGGTTATTATGTCCATCTGGTCTTCTATTGCAACTTCTTATTGTCAAAATATTTGAAGAATGTGTAAGATTATCATTGTTAAGCCTCCCATTTTAAAGTCACTTATTTTTCTTGATTGAGCTAATTTTCCAACATAGTCAGTCCTGTGCTTCAGAGGTGCTCCTAGCTGTACCCTAAATAAAACTAGGAGGTCACCCAAAAAAGTAGTATAAATTGGTTCATAAGATGGATCTAGCTTCTGCACTTTGCACTGCCCTTGAAATATTTTCTTTACAAAAGATGATGCCCTGAAATTTATATGCTCTCCAATTTTTAACTGCATTATTGGATGTTTGTTAGGTTACATCAAAGCATCTCAAAGGTGGGAAAGAATCAAGAATGGATGTGCTTGTTATGGAAAATCTTCTTTTTAAGCGCAACATCACTAGACTGTATGACCTCAAAGGGTCGTCTCGATCACGCTATAATCCAGATTCAAGTGGAAGTAACAAAGTTTTACTTGATCAGAACTTGATTGAAGCAATGCCAACTTCTCCGATTTTTGTGGGAACGCAAGCTAAGCGGCTGCTGCAGAGAGCTGTGTGGAATGATACTTCATTTCTAGCGGTAAGCTTTGAAACAGCACCGATATGACTAGTAACTTCGTTAAATTGTGTTCTATAAAGAGTTCTGTATTTCTTCGTTCTAGCTGGGGTTACTAGTTTATTATTTCCTCTCTTCAATAAAGATTATAGATGATTGCTGGACCCGTCCCCCTTTTCTCCCTTTGCCACACCCGGTATCTTTTCTTTGTTTTCTAATTGTTTCTCCTTTCTTTTGCAAGATGCACTTGACCTTGTCACTGCACTAGTTCTCTCATTTGTTAGTAGGTTCTCCAAACTTTTTTGTTAGTCTATGTTAACCACCACCAAGTATACGTTGAAGTGTCCAAAGTGGGACTTCATGCTCTTCAAACACGTATTAGACGCAACTTATGTTTCAGTCCCTCCTCTGCTATATTAATAGAGTTATGGTTTTGCAGTCAATAGATGTGATGGATTACTCATTACTAGTTGGGGTGGATGAGAAGAAGCAGGAACTGGTGCTTGGTATTATTGATTTCATGAGACAGTATACGTGGGACAAGCATCTCGAGACTTGGGTAAAGGCTTCAGGTATTCTAGGTGGGCCGAAGAATGCAGCCCCAACGGTGATTTCTCCAAAGCAATACAAAATAAGATTCAGGAAAGCAATGTCTACATACTTTCTGATGGTGCCAGATGAGTGGCCTACATGAAGTGATACCCCAAGTATCAGTGCAGAAAAATTGCCCCGGCCGGTCTTGGTATAATTTTATCCATCCTTTCTTATGCCATCAAGTTTTGTGTATTTTGTGCAGGAATGTTGGGTAGTTGCTTTATCATTAGAGGATTACTTTTGTTTTTCCAAAGTAGTAGTATTACAGAGTTATTTCCATACAAAGAATTTGTTAGTTTCTGGGCGTTCCGCCAGTTGTACAGTCAATAGTCGGTCTTCGTTTCTTTTTATCCCACATTCTGATGCTCAATGGAAGCTCTTGGTATATTCATGTGTTTACATG</genome_strand>
        <mrna_strand>ACTTGCTTGGCAAAGATTCTGGGGATCTACCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACATCAAAGCATCTCAAAGGTGGGAAAGAATCAAGAATGGATGTGCTTGTTATGGAAAATCTTCTTTTTAAGCGCAACATCACTAGACTGTATGACCTCAAAGGGTCGTCTCGATCACGCTATAATCCAGATTCAAGTGGAAGTAACAAAGTTTTACTTGATCAGAACTTGATTGAAGCAATGCCAACTTCTCCGATTTTTGTGGGAACGCAAGCTAAGCGGCTGCTGCAGAGAGCTGTGTGGAATGATACTTCATTTCTAGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................TCAATAGATGTGATGGATTACTCATTACTAGTTGGGGTGGATGAGAAGAAGCAGGAACTGGTGCTTGGTATTATTGATTTCATGAGACAGTATACGTGGGACAAGCATCTCGAGACTTGGGTAAAGGCTTCAGGTATTCTAGGTGGGCCGAAGAATGCAGCCCCAACGGTGATTTCTCCAAAGCAATACAAAATAAGATTCAGGAAAGCAATGTCTACATACTTTCTGATGGTGCCAGATGAGTGGCCTACATGAAGTGATACCCCAAGTATCAGTGCAGAAAAATTGCCCCGGCCGGTCTTGGTATAATTTTATCCATCCTTTCTTATGCCATCAAGTTTTGTGTATTTTGTGCAGGAATGTTGGGTAGTTGCTTTATCATTAGAGGATTACTTTTGTTTTTCCAAAGTAGTAGTATTACAGAGTTATTTCCATACAAAGAATTTGTTAGTTTCTGGGCGTTCCGCCAGTTGTACAGTCAATAGTCGGTCTTCGTTTCTTTTTATCCCACATTCTGATGCTCAATGGAAGCTCTTGGTATATTCATGTGTTTACATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E249673" ref_strand="+" ref_description="SGN-E249673 [cLEF-56-L5]">
      <seq>ttttattagagaagtccaacaatttaatgaagtgttgcttgttcattgttcatctgagaactagctagctgacattttcaccaagtcattgccaaaggaaaggtttgaagatccgaggcaaagaattagtgtttgccacaaaaatgccaaggaggagtgttagacaattgacattttttcagcttattattatttttactattttttacttatttcaatttagtgcttcctattttctagtagacttagtcaactttagttgctcaactttctgaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="26585" stop="27461"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26885" g_stop="27161" g_length="277"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="277" r_length="277" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E249673" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>277</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E249673" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26885" e_stop="27161"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTATTAGAGAAGTCCAACAATTTAATGAAGTGTTGCTTGTTCATTGTTCATCTGAGAACTAGCTAGCTGACATTTTCACCAAGTCATTGCCAAAGGAAAGGTTTGAAGATCCGAGGCAAAGAATTAGTGTTTGCCACAAAAATGCCAAGGAGGAGTGTTAGACAATTGACATTTTTTCAGCTTATTATTATTTTTACTATTTTTTACTTATTTCAATTTAGTGCTTCCTATTTTCTAGTAGACTTAGTCAACTTTAGTTGCTCAACTTTCTGAAG</genome_strand>
        <mrna_strand>TTTTATTAGAGAAGTCCAACAATTTAATGAAGTGTTGCTTGTTCATTGTTCATCTGAGAACTAGCTAGCTGACATTTTCACCAAGTCATTGCCAAAGGAAAGGTTTGAAGATCCGAGGCAAAGAATTAGTGTTTGCCACAAAAATGCCAAGGAGGAGTGTTAGACAATTGACATTTTTTCAGCTTATTATTATTTTTACTATTTTTTACTTATTTCAATTTAGTGCTTCCTATTTTCTAGTAGACTTAGTCAACTTTAGTTGCTCAACTTTCTGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E394967" ref_strand="+" ref_description="SGN-E394967 [TUS-34-G22]">
      <seq>aaaggtgggaaagaatcaagaatggatgtgcttgttatggaaaatcttctttttaagcgcaacatcactagactgtatgacctcaaagggtcgtctcgatcacgctataatccagattcaagtggaagtaacaaagttttacttgatcagaacttgattgaagcaatgccaacttctccgatttttgtgggaacgcaagctaagcggctgctgcagagagctgtgtggaatgatacttcatttctagcgtcaatagatgtgatggattactcattactagttggggtggatgagaagaagcaggaactggtgcttggtattattgatttcatgagacagtatacgtgggacaagcatctcgagacttgggtaaaggcttcaggtattctaggtgggccgaagaatgcagccccaacggtgatttctccaaagcaatacaaaataagattcaggaaagcaatgtctacatactttctgatggtgccagatggagtggcctacatgaagtgataccccaaatatcagtgcaaaaaaattgcccccggccgggtcttggtataattttatccatcctttcttatgccatcaagtttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="27413" stop="29018"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27713" g_stop="27961" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="249" r_length="249" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27962" i_stop="28376" i_length="415">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28377" g_stop="28718" g_length="342"/>
          <reference_exon_boundary r_type="cDNA" r_start="250" r_stop="594" r_length="345" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E394967" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>591</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E394967" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27713" e_stop="27961"/>
          <exon e_start="28377" e_stop="28718"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGGTGGGAAAGAATCAAGAATGGATGTGCTTGTTATGGAAAATCTTCTTTTTAAGCGCAACATCACTAGACTGTATGACCTCAAAGGGTCGTCTCGATCACGCTATAATCCAGATTCAAGTGGAAGTAACAAAGTTTTACTTGATCAGAACTTGATTGAAGCAATGCCAACTTCTCCGATTTTTGTGGGAACGCAAGCTAAGCGGCTGCTGCAGAGAGCTGTGTGGAATGATACTTCATTTCTAGCGGTAAGCTTTGAAACAGCACCGATATGACTAGTAACTTCGTTAAATTGTGTTCTATAAAGAGTTCTGTATTTCTTCGTTCTAGCTGGGGTTACTAGTTTATTATTTCCTCTCTTCAATAAAGATTATAGATGATTGCTGGACCCGTCCCCCTTTTCTCCCTTTGCCACACCCGGTATCTTTTCTTTGTTTTCTAATTGTTTCTCCTTTCTTTTGCAAGATGCACTTGACCTTGTCACTGCACTAGTTCTCTCATTTGTTAGTAGGTTCTCCAAACTTTTTTGTTAGTCTATGTTAACCACCACCAAGTATACGTTGAAGTGTCCAAAGTGGGACTTCATGCTCTTCAAACACGTATTAGACGCAACTTATGTTTCAGTCCCTCCTCTGCTATATTAATAGAGTTATGGTTTTGCAGTCAATAGATGTGATGGATTACTCATTACTAGTTGGGGTGGATGAGAAGAAGCAGGAACTGGTGCTTGGTATTATTGATTTCATGAGACAGTATACGTGGGACAAGCATCTCGAGACTTGGGTAAAGGCTTCAGGTATTCTAGGTGGGCCGAAGAATGCAGCCCCAACGGTGATTTCTCCAAAGCAATACAAAATAAGATTCAGGAAAGCAATGTCTACATACTTTCTGATGGTGCCAGAT-GAGTGGCCTACATGAAGTGATACCCCAAGTATCAGTGCAGAAAAATTG-CCCCGGCC-GGTCTTGGTATAATTTTATCCATCCTTTCTTATGCCATCAAGTTTT</genome_strand>
        <mrna_strand>AAAGGTGGGAAAGAATCAAGAATGGATGTGCTTGTTATGGAAAATCTTCTTTTTAAGCGCAACATCACTAGACTGTATGACCTCAAAGGGTCGTCTCGATCACGCTATAATCCAGATTCAAGTGGAAGTAACAAAGTTTTACTTGATCAGAACTTGATTGAAGCAATGCCAACTTCTCCGATTTTTGTGGGAACGCAAGCTAAGCGGCTGCTGCAGAGAGCTGTGTGGAATGATACTTCATTTCTAGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................TCAATAGATGTGATGGATTACTCATTACTAGTTGGGGTGGATGAGAAGAAGCAGGAACTGGTGCTTGGTATTATTGATTTCATGAGACAGTATACGTGGGACAAGCATCTCGAGACTTGGGTAAAGGCTTCAGGTATTCTAGGTGGGCCGAAGAATGCAGCCCCAACGGTGATTTCTCCAAAGCAATACAAAATAAGATTCAGGAAAGCAATGTCTACATACTTTCTGATGGTGCCAGATGGAGTGGCCTACATGAAGTGATACCCCAAATATCAGTGCAAAAAAATTGCCCCCGGCCGGGTCTTGGTATAATTTTATCCATCCTTTCTTATGCCATCAAGTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E249579" ref_strand="+" ref_description="SGN-E249579 [cLEF-56-N20]">
      <seq>aaggtgggaaagaatcaagaatggatgtgctgggtatggaaaatcttctttttaagcgcaacatcactagactgtatgacctcaaagggtcgtctcgatcacgctataatccagattcaagtggaagtaacaaagttttacttgatcagaacttgattgaagcaatgccaacttctccgatttttgtgggaacgcaagctaagcggctgctgcagagagctgtgtggaatgatacttcatttctagcgtcaatagatgtgatggattactcattactagttggggtggatgagaagaagcaggaactggtgcttggtattattgatttcatgagacagtatacgtgggacaagcatctcgagacttgggtaaaggcttcaggtattctaggtgggccgaagaatgcagccccaacggtgatttctccaaagcaatacaaaataagattcaggaaagcaatgtctacatactttctgatggtgccagatgagtggcctacatgaagtgataccccaagtatcagtgcagaaaaattgccccggccggtcttggtataattttatccatcctttcttatgccatcaagttttgtgtattttgtgcaagaatgttgggtagttgctttatcatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="27414" stop="29059"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27714" g_stop="27961" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="248" r_length="248" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27962" i_stop="28376" i_length="415">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28377" g_stop="28759" g_length="383"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="631" r_length="383" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E249579" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>631</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E249579" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27714" e_stop="27961"/>
          <exon e_start="28377" e_stop="28759"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGTGGGAAAGAATCAAGAATGGATGTGCTTGTTATGGAAAATCTTCTTTTTAAGCGCAACATCACTAGACTGTATGACCTCAAAGGGTCGTCTCGATCACGCTATAATCCAGATTCAAGTGGAAGTAACAAAGTTTTACTTGATCAGAACTTGATTGAAGCAATGCCAACTTCTCCGATTTTTGTGGGAACGCAAGCTAAGCGGCTGCTGCAGAGAGCTGTGTGGAATGATACTTCATTTCTAGCGGTAAGCTTTGAAACAGCACCGATATGACTAGTAACTTCGTTAAATTGTGTTCTATAAAGAGTTCTGTATTTCTTCGTTCTAGCTGGGGTTACTAGTTTATTATTTCCTCTCTTCAATAAAGATTATAGATGATTGCTGGACCCGTCCCCCTTTTCTCCCTTTGCCACACCCGGTATCTTTTCTTTGTTTTCTAATTGTTTCTCCTTTCTTTTGCAAGATGCACTTGACCTTGTCACTGCACTAGTTCTCTCATTTGTTAGTAGGTTCTCCAAACTTTTTTGTTAGTCTATGTTAACCACCACCAAGTATACGTTGAAGTGTCCAAAGTGGGACTTCATGCTCTTCAAACACGTATTAGACGCAACTTATGTTTCAGTCCCTCCTCTGCTATATTAATAGAGTTATGGTTTTGCAGTCAATAGATGTGATGGATTACTCATTACTAGTTGGGGTGGATGAGAAGAAGCAGGAACTGGTGCTTGGTATTATTGATTTCATGAGACAGTATACGTGGGACAAGCATCTCGAGACTTGGGTAAAGGCTTCAGGTATTCTAGGTGGGCCGAAGAATGCAGCCCCAACGGTGATTTCTCCAAAGCAATACAAAATAAGATTCAGGAAAGCAATGTCTACATACTTTCTGATGGTGCCAGATGAGTGGCCTACATGAAGTGATACCCCAAGTATCAGTGCAGAAAAATTGCCCCGGCCGGTCTTGGTATAATTTTATCCATCCTTTCTTATGCCATCAAGTTTTGTGTATTTTGTGCAGGAATGTTGGGTAGTTGCTTTATCATT</genome_strand>
        <mrna_strand>AAGGTGGGAAAGAATCAAGAATGGATGTGCTGGGTATGGAAAATCTTCTTTTTAAGCGCAACATCACTAGACTGTATGACCTCAAAGGGTCGTCTCGATCACGCTATAATCCAGATTCAAGTGGAAGTAACAAAGTTTTACTTGATCAGAACTTGATTGAAGCAATGCCAACTTCTCCGATTTTTGTGGGAACGCAAGCTAAGCGGCTGCTGCAGAGAGCTGTGTGGAATGATACTTCATTTCTAGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................TCAATAGATGTGATGGATTACTCATTACTAGTTGGGGTGGATGAGAAGAAGCAGGAACTGGTGCTTGGTATTATTGATTTCATGAGACAGTATACGTGGGACAAGCATCTCGAGACTTGGGTAAAGGCTTCAGGTATTCTAGGTGGGCCGAAGAATGCAGCCCCAACGGTGATTTCTCCAAAGCAATACAAAATAAGATTCAGGAAAGCAATGTCTACATACTTTCTGATGGTGCCAGATGAGTGGCCTACATGAAGTGATACCCCAAGTATCAGTGCAGAAAAATTGCCCCGGCCGGTCTTGGTATAATTTTATCCATCCTTTCTTATGCCATCAAGTTTTGTGTATTTTGTGCAAGAATGTTGGGTAGTTGCTTTATCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E701018" ref_strand="+" ref_description="SGN-E701018 [FA14DC03]">
      <seq>caagaatggatgtgcttgttatggaaaatcttctttttaagcgcaacatcactagactgtatgacctcaaagggtcgtctcgatcacgctataatccagattcaagtggaagtaacaaagttttacttgatcagaacttgattgaagcaatgccaacttctccgatttttgtgggaacgcaagctaagcggctgctgcagagagctgtgtggaatgatacttcatttctagcgtcaatagatgtgatggattactcattactagttggggtggatgagaagaagcaggaactggtgcttggtattattgatttcatgagacagtatacgtgggacaagcatctcgagacttgggtaaaggcttcaggtattctaggtgggccgaagaatgcagccccaacggtgatttctccaaagcaatacaaaataagattcaggaaagcaatgtctacatactttctgatggtgccagatgagtggcctacatgaagtgataccccaagtatcagtgcagaaaaattgccccggccggtcttggtataattttatccatcctttcttatgccatcaagttttgtgtattttgtgcaggaatgttgggtagttgctttatcattagaggattacttttgtttttccaaagtagtagtattacagagttatttccatacaaagaatttgttagtttctgggcgttccgccagttgtacagtcaatagtcggtcttcgtttctttttatcccacattctgatgctcaatggaagctcttggtatattcatgtgtttacatgagaattgagactcttttgacaagggctgccgtggtagcagtaaagatcaatgtaatttgatcttgtaagtcctacaatcggatggttttcaataagctgcactcgcgacattttgattttcaggcacctatgcaatgagttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="27429" stop="29377"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27729" g_stop="27961" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="233" r_length="233" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27962" i_stop="28376" i_length="415">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28377" g_stop="29077" g_length="701"/>
          <reference_exon_boundary r_type="cDNA" r_start="234" r_stop="934" r_length="701" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E701018" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>934</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E701018" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27729" e_stop="27961"/>
          <exon e_start="28377" e_stop="29077"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGAATGGATGTGCTTGTTATGGAAAATCTTCTTTTTAAGCGCAACATCACTAGACTGTATGACCTCAAAGGGTCGTCTCGATCACGCTATAATCCAGATTCAAGTGGAAGTAACAAAGTTTTACTTGATCAGAACTTGATTGAAGCAATGCCAACTTCTCCGATTTTTGTGGGAACGCAAGCTAAGCGGCTGCTGCAGAGAGCTGTGTGGAATGATACTTCATTTCTAGCGGTAAGCTTTGAAACAGCACCGATATGACTAGTAACTTCGTTAAATTGTGTTCTATAAAGAGTTCTGTATTTCTTCGTTCTAGCTGGGGTTACTAGTTTATTATTTCCTCTCTTCAATAAAGATTATAGATGATTGCTGGACCCGTCCCCCTTTTCTCCCTTTGCCACACCCGGTATCTTTTCTTTGTTTTCTAATTGTTTCTCCTTTCTTTTGCAAGATGCACTTGACCTTGTCACTGCACTAGTTCTCTCATTTGTTAGTAGGTTCTCCAAACTTTTTTGTTAGTCTATGTTAACCACCACCAAGTATACGTTGAAGTGTCCAAAGTGGGACTTCATGCTCTTCAAACACGTATTAGACGCAACTTATGTTTCAGTCCCTCCTCTGCTATATTAATAGAGTTATGGTTTTGCAGTCAATAGATGTGATGGATTACTCATTACTAGTTGGGGTGGATGAGAAGAAGCAGGAACTGGTGCTTGGTATTATTGATTTCATGAGACAGTATACGTGGGACAAGCATCTCGAGACTTGGGTAAAGGCTTCAGGTATTCTAGGTGGGCCGAAGAATGCAGCCCCAACGGTGATTTCTCCAAAGCAATACAAAATAAGATTCAGGAAAGCAATGTCTACATACTTTCTGATGGTGCCAGATGAGTGGCCTACATGAAGTGATACCCCAAGTATCAGTGCAGAAAAATTGCCCCGGCCGGTCTTGGTATAATTTTATCCATCCTTTCTTATGCCATCAAGTTTTGTGTATTTTGTGCAGGAATGTTGGGTAGTTGCTTTATCATTAGAGGATTACTTTTGTTTTTCCAAAGTAGTAGTATTACAGAGTTATTTCCATACAAAGAATTTGTTAGTTTCTGGGCGTTCCGCCAGTTGTACAGTCAATAGTCGGTCTTCGTTTCTTTTTATCCCACATTCTGATGCTCAATGGAAGCTCTTGGTATATTCATGTGTTTACATGAGAATTGAGACTCTTTTGACAAGGGCTGCCGTGGTAGCAGTAAAGATCAATGTAATTTGATCTTGTAAGTCCTACAATCGGATGGTTTCAAATAAGCTGCACTCGCGACATTTTGATTTTCAGGCACCTATGCAATGAGTTGT</genome_strand>
        <mrna_strand>CAAGAATGGATGTGCTTGTTATGGAAAATCTTCTTTTTAAGCGCAACATCACTAGACTGTATGACCTCAAAGGGTCGTCTCGATCACGCTATAATCCAGATTCAAGTGGAAGTAACAAAGTTTTACTTGATCAGAACTTGATTGAAGCAATGCCAACTTCTCCGATTTTTGTGGGAACGCAAGCTAAGCGGCTGCTGCAGAGAGCTGTGTGGAATGATACTTCATTTCTAGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................TCAATAGATGTGATGGATTACTCATTACTAGTTGGGGTGGATGAGAAGAAGCAGGAACTGGTGCTTGGTATTATTGATTTCATGAGACAGTATACGTGGGACAAGCATCTCGAGACTTGGGTAAAGGCTTCAGGTATTCTAGGTGGGCCGAAGAATGCAGCCCCAACGGTGATTTCTCCAAAGCAATACAAAATAAGATTCAGGAAAGCAATGTCTACATACTTTCTGATGGTGCCAGATGAGTGGCCTACATGAAGTGATACCCCAAGTATCAGTGCAGAAAAATTGCCCCGGCCGGTCTTGGTATAATTTTATCCATCCTTTCTTATGCCATCAAGTTTTGTGTATTTTGTGCAGGAATGTTGGGTAGTTGCTTTATCATTAGAGGATTACTTTTGTTTTTCCAAAGTAGTAGTATTACAGAGTTATTTCCATACAAAGAATTTGTTAGTTTCTGGGCGTTCCGCCAGTTGTACAGTCAATAGTCGGTCTTCGTTTCTTTTTATCCCACATTCTGATGCTCAATGGAAGCTCTTGGTATATTCATGTGTTTACATGAGAATTGAGACTCTTTTGACAAGGGCTGCCGTGGTAGCAGTAAAGATCAATGTAATTTGATCTTGTAAGTCCTACAATCGGATGGTTTTCAATAAGCTGCACTCGCGACATTTTGATTTTCAGGCACCTATGCAATGAGTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E369111" ref_strand="+" ref_description="SGN-E369111 [TUS-23-I16](-)">
      <seq>aatgccaacttctccgatttttgtgggaacgcaagctaagcggctgctgcagagagctgtgtggaatgatacttcatttctagcgtcaatagatgtgatggattactcattactagttggggtggatgagaaaaagcaggaactggtgcttggtattattgatttcatgagacagtatacgtgggacaagcatctcgagacttgggtaaaggcttcaggtattttaggtgggccgaagaatgcagccccaacggtgatttctccaaagcaatacaaaataagattcaggaaagcaatgtttacatactttttgatggtgccagatgagtggcctacatgaagtgataccccaagtatcagtgcagaaaaattgccccggccggtcttggtataattttatccatcctttcttatgccatcaagttttgtgtattttgtgcaggaatgttgggtagttgctttatcattaaaggattacttttgtttttccaaagtagtagtattacagagttatttccatacaaagaatttgttagtttttgggcgttccgccagttgtacagtcaatagtcggtcttcgtttctttttaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="27577" stop="62954"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27877" g_stop="27961" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="85" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27962" i_stop="28376" i_length="415">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28377" g_stop="28880" g_length="504"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="589" r_length="504" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28881" i_stop="29461" i_length="581">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29462" g_stop="29486" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="590" r_stop="614" r_length="25" r_score="0.720"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E369111" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>614</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E369111" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27877" e_stop="27961"/>
          <exon e_start="28377" e_stop="28880"/>
          <exon e_start="29462" e_stop="29486"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGCCAACTTCTCCGATTTTTGTGGGAACGCAAGCTAAGCGGCTGCTGCAGAGAGCTGTGTGGAATGATACTTCATTTCTAGCGGTAAGCTTTGAAACAGCACCGATATGACTAGTAACTTCGTTAAATTGTGTTCTATAAAGAGTTCTGTATTTCTTCGTTCTAGCTGGGGTTACTAGTTTATTATTTCCTCTCTTCAATAAAGATTATAGATGATTGCTGGACCCGTCCCCCTTTTCTCCCTTTGCCACACCCGGTATCTTTTCTTTGTTTTCTAATTGTTTCTCCTTTCTTTTGCAAGATGCACTTGACCTTGTCACTGCACTAGTTCTCTCATTTGTTAGTAGGTTCTCCAAACTTTTTTGTTAGTCTATGTTAACCACCACCAAGTATACGTTGAAGTGTCCAAAGTGGGACTTCATGCTCTTCAAACACGTATTAGACGCAACTTATGTTTCAGTCCCTCCTCTGCTATATTAATAGAGTTATGGTTTTGCAGTCAATAGATGTGATGGATTACTCATTACTAGTTGGGGTGGATGAGAAGAAGCAGGAACTGGTGCTTGGTATTATTGATTTCATGAGACAGTATACGTGGGACAAGCATCTCGAGACTTGGGTAAAGGCTTCAGGTATTCTAGGTGGGCCGAAGAATGCAGCCCCAACGGTGATTTCTCCAAAGCAATACAAAATAAGATTCAGGAAAGCAATGTCTACATACTTTCTGATGGTGCCAGATGAGTGGCCTACATGAAGTGATACCCCAAGTATCAGTGCAGAAAAATTGCCCCGGCCGGTCTTGGTATAATTTTATCCATCCTTTCTTATGCCATCAAGTTTTGTGTATTTTGTGCAGGAATGTTGGGTAGTTGCTTTATCATTAGAGGATTACTTTTGTTTTTCCAAAGTAGTAGTATTACAGAGTTATTTCCATACAAAGAATTTGTTAGTTTCTGGGCGTTCCGCCAGTTGTACAGTCAATAGTCGGTCTTCGTTTCTTTTTATCCCACATTCTGATGCTCAATGGAAGCTCTTGGTATATTCATGTGTTTACATGAGAATTGAGACTCTTTTGACAAGGGCTGCCGTGGTAGCAGTAAAGATCAATGTAATTTGATCTTGTAAGTCCTACAATCGGATGGTTTCAAATAAGCTGCACTCGCGACATTTTGATTTTCAGGCACCTATGCAATGAGTTGTACTTGTCGCGATTCTTCGCCTCCTTCCTATTTTGCACACGGTATAGGTTGATCAATTATTATGTGCTTTCAACTTGCAGAATATTCAGCACCAAAATTTCTGTAGTTTAAATGTTGAATTTTTCCTGGCAACTCGAGAGAGTAAGGGCCTTATTAATTTCTATTAAGGTTAAGAAGTCTGAATCTGAATATTAAGATGTGGTTTCTAAATTTGGACATTAAATAATTCATGCTGTTTGTTTTCAACATCTGAATGTGCATGTGAAATTGAACATTATATAAGTAACATATTATAAAAAGTTCATTTAACAAAATATATCACTTTTGATTTAAAAAGAAGTCTTAAAAATTTAATGAAAATGATTTGAAGTAGTATTTTTCATTCAAAAATAAAATAAAATACGAGAACA</genome_strand>
        <mrna_strand>AATGCCAACTTCTCCGATTTTTGTGGGAACGCAAGCTAAGCGGCTGCTGCAGAGAGCTGTGTGGAATGATACTTCATTTCTAGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................TCAATAGATGTGATGGATTACTCATTACTAGTTGGGGTGGATGAGAAAAAGCAGGAACTGGTGCTTGGTATTATTGATTTCATGAGACAGTATACGTGGGACAAGCATCTCGAGACTTGGGTAAAGGCTTCAGGTATTTTAGGTGGGCCGAAGAATGCAGCCCCAACGGTGATTTCTCCAAAGCAATACAAAATAAGATTCAGGAAAGCAATGTTTACATACTTTTTGATGGTGCCAGATGAGTGGCCTACATGAAGTGATACCCCAAGTATCAGTGCAGAAAAATTGCCCCGGCCGGTCTTGGTATAATTTTATCCATCCTTTCTTATGCCATCAAGTTTTGTGTATTTTGTGCAGGAATGTTGGGTAGTTGCTTTATCATTAAAGGATTACTTTTGTTTTTCCAAAGTAGTAGTATTACAGAGTTATTTCCATACAAAGAATTTGTTAGTTTTTGGGCGTTCCGCCAGTTGTACAGTCAATAGTCGGTCTTCGTTTCTTTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E249945" ref_strand="+" ref_description="SGN-E249945 [cLEG-4-I21]">
      <seq>ggacaagcatctcgagacttgggtaaaggcttcaggtattctaggtgggccgaagaatgcagccccaacggtgatttctccaaagcaatacaaaataagattcaggaaagcaatgtctacatactttctgatggtgccagatgagtggcctacatgaagtgataccccaagtatcagtgcagaaaaattgccccggccggtcttggtataattttatccatcctttcttatgccatcaagttttgtgtattttgtgcaggaatgttgggtagttgctttatcattagaggattacttttgtttttccaaagtagtagtattacagagttatttccatacaaagaatttgttagtttctgggcgttccgccagttgtacagtcaatagtcggtcttcgtttctttttatcccacattctgatgctcaatggaagctcttggtaaaaaaaaaaaaaaaaaactcgagactagccatggaagtgatgctgttgagagtgctag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="28175" stop="62963"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28475" g_stop="28913" g_length="439"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="439" r_length="439" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28914" i_stop="30142" i_length="1229">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.245" a_score="0.64"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30143" g_stop="30205" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="440" r_stop="500" r_length="61" r_score="0.587"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E249945" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>502</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E249945" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28475" e_stop="28913"/>
          <exon e_start="30143" e_stop="30205"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGACAAGCATCTCGAGACTTGGGTAAAGGCTTCAGGTATTCTAGGTGGGCCGAAGAATGCAGCCCCAACGGTGATTTCTCCAAAGCAATACAAAATAAGATTCAGGAAAGCAATGTCTACATACTTTCTGATGGTGCCAGATGAGTGGCCTACATGAAGTGATACCCCAAGTATCAGTGCAGAAAAATTGCCCCGGCCGGTCTTGGTATAATTTTATCCATCCTTTCTTATGCCATCAAGTTTTGTGTATTTTGTGCAGGAATGTTGGGTAGTTGCTTTATCATTAGAGGATTACTTTTGTTTTTCCAAAGTAGTAGTATTACAGAGTTATTTCCATACAAAGAATTTGTTAGTTTCTGGGCGTTCCGCCAGTTGTACAGTCAATAGTCGGTCTTCGTTTCTTTTTATCCCACATTCTGATGCTCAATGGAAGCTCTTGGTATATTCATGTGTTTACATGAGAATTGAGACTCTTTTGACAAGGGCTGCCGTGGTAGCAGTAAAGATCAATGTAATTTGATCTTGTAAGTCCTACAATCGGATGGTTTCAAATAAGCTGCACTCGCGACATTTTGATTTTCAGGCACCTATGCAATGAGTTGTACTTGTCGCGATTCTTCGCCTCCTTCCTATTTTGCACACGGTATAGGTTGATCAATTATTATGTGCTTTCAACTTGCAGAATATTCAGCACCAAAATTTCTGTAGTTTAAATGTTGAATTTTTCCTGGCAACTCGAGAGAGTAAGGGCCTTATTAATTTCTATTAAGGTTAAGAAGTCTGAATCTGAATATTAAGATGTGGTTTCTAAATTTGGACATTAAATAATTCATGCTGTTTGTTTTCAACATCTGAATGTGCATGTGAAATTGAACATTATATAAGTAACATATTATAAAAAGTTCATTTAACAAAATATATCACTTTTGATTTAAAAAGAAGTCTTAAAAATTTAATGAAAATGATTTGAAGTAGTATTTTTCATTCAAAAATAAAATAAAATACGAGAACATGAAAATTATTGCCCCAAAAATCATTCATAAATAATAATATATCAAAAATATTACTGTAATTGTCTTTTAGACACACGTCAACACGCATCAAAAAAGACTTTTCGAAGCGCGGAATTCCAGAATGGAATCATTAGAAAATTATTGATTTAAAAAGAAATACTTAAAAGGATTTATGAAGATTTAGCGGTTAGAGGGAAAAAATGGTGTTAAATTGAGGAAAGAGAGGACAAGTTTTTAGTTATGAGGTTAAAAGGTACATCCAAAGCAGAGAAGCGAAGATTTATTATTTGATAACTTATTAAATGAGTCTGAAAATTGTTAATAGTCTCTTACATAAATGAACTTAATAATTTAATGGGTTGAATTTGAATGATTAAAGATTGAAAAAATTACATAAATAAATGTCTTTTATTTTGTAATTACCAATTTTAAGTATATTTTAATTTATTATCATTTTTGTCAATTTTTAGCCATACTAACTTAAAACAATTTTAAAACATATTTATTTCTTTTTCATACAATTTTTAAACTAAGCAAAAATGTATTCACTTATATCCTCTCTCTCTCTCGATTTTCTTTCTACTCGTTTGTCCGAAAAGTTAGGCTTTCTTGTTCTTTCTTTCCCATTTTTCTATACAAATTCTAATGGAAGAAGGTAAAGGAAAATCAAGAAGAAGTCAAAGGCTACTTAGTGAGGTTGATACT-TCGAATATGAAAG</genome_strand>
        <mrna_strand>GGACAAGCATCTCGAGACTTGGGTAAAGGCTTCAGGTATTCTAGGTGGGCCGAAGAATGCAGCCCCAACGGTGATTTCTCCAAAGCAATACAAAATAAGATTCAGGAAAGCAATGTCTACATACTTTCTGATGGTGCCAGATGAGTGGCCTACATGAAGTGATACCCCAAGTATCAGTGCAGAAAAATTGCCCCGGCCGGTCTTGGTATAATTTTATCCATCCTTTCTTATGCCATCAAGTTTTGTGTATTTTGTGCAGGAATGTTGGGTAGTTGCTTTATCATTAGAGGATTACTTTTGTTTTTCCAAAGTAGTAGTATTACAGAGTTATTTCCATACAAAGAATTTGTTAGTTTCTGGGCGTTCCGCCAGTTGTACAGTCAATAGTCGGTCTTCGTTTCTTTTTATCCCACATTCTGATGCTCAATGGAAGCTCTTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAA-AAAAAAAAAAAAAAACTC-GAGACTAGCCATGGAAG-TGATGCTGTTGAGAGTGCTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E244298" ref_strand="+" ref_description="SGN-E244298 [cLEF-37-I5](-)">
      <seq>gacttgggtaaaggcttcaggtattctaggtgggccgaagaatgcagccccaacggtgatttctccaaagcaatacaaaataagattcaggaaagcaatgtctacatactttctgatggtgccagatgagtggcctacatgaagtgataccccaagtatcagtgcagaaaaattgccccggccggtcttggtataattttatccatcctttcttatgccatcaagttttgtgtattttgtgcaggaatgttgggtagttgctttatcattagaggattacttttgtttttccaaagtagtagtattacagagttatttccatacaaagaatttgttagtttctgggcgttccgccagttgtacagtcaatagtcggtcttcgtttctttttatcccacattctgatgctcaatggaagctcttggtatattcatgtgtttacatgagaattgagactcttttgacaagggctgccgtggtagcagtaaagatcaatgtaatttgatcttgtaagtcctacaatcggatggtttcaaataaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="28190" stop="29329"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28490" g_stop="29036" g_length="547"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="547" r_length="547" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E244298" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>547</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E244298" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28490" e_stop="29036"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACTTGGGTAAAGGCTTCAGGTATTCTAGGTGGGCCGAAGAATGCAGCCCCAACGGTGATTTCTCCAAAGCAATACAAAATAAGATTCAGGAAAGCAATGTCTACATACTTTCTGATGGTGCCAGATGAGTGGCCTACATGAAGTGATACCCCAAGTATCAGTGCAGAAAAATTGCCCCGGCCGGTCTTGGTATAATTTTATCCATCCTTTCTTATGCCATCAAGTTTTGTGTATTTTGTGCAGGAATGTTGGGTAGTTGCTTTATCATTAGAGGATTACTTTTGTTTTTCCAAAGTAGTAGTATTACAGAGTTATTTCCATACAAAGAATTTGTTAGTTTCTGGGCGTTCCGCCAGTTGTACAGTCAATAGTCGGTCTTCGTTTCTTTTTATCCCACATTCTGATGCTCAATGGAAGCTCTTGGTATATTCATGTGTTTACATGAGAATTGAGACTCTTTTGACAAGGGCTGCCGTGGTAGCAGTAAAGATCAATGTAATTTGATCTTGTAAGTCCTACAATCGGATGGTTTCAAATAAGCTGCAC</genome_strand>
        <mrna_strand>GACTTGGGTAAAGGCTTCAGGTATTCTAGGTGGGCCGAAGAATGCAGCCCCAACGGTGATTTCTCCAAAGCAATACAAAATAAGATTCAGGAAAGCAATGTCTACATACTTTCTGATGGTGCCAGATGAGTGGCCTACATGAAGTGATACCCCAAGTATCAGTGCAGAAAAATTGCCCCGGCCGGTCTTGGTATAATTTTATCCATCCTTTCTTATGCCATCAAGTTTTGTGTATTTTGTGCAGGAATGTTGGGTAGTTGCTTTATCATTAGAGGATTACTTTTGTTTTTCCAAAGTAGTAGTATTACAGAGTTATTTCCATACAAAGAATTTGTTAGTTTCTGGGCGTTCCGCCAGTTGTACAGTCAATAGTCGGTCTTCGTTTCTTTTTATCCCACATTCTGATGCTCAATGGAAGCTCTTGGTATATTCATGTGTTTACATGAGAATTGAGACTCTTTTGACAAGGGCTGCCGTGGTAGCAGTAAAGATCAATGTAATTTGATCTTGTAAGTCCTACAATCGGATGGTTTCAAATAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E218230" ref_strand="-" ref_description="SGN-E218230 [cLEL-23-K17](-)">
      <seq>ttttttttttttttttttttgatcaacctataccgtgtgcaaaataggaaggaggcgaagaatcgcgacaagtacaactcattgcataggtgcctgaaaatcaaaatgtcgcgagtgcagcttatttgaaaccatccgattgtaggacttacaagatcaaattacattgatctttactgctaccacggcagcccttgtcaaaagagtctcaattctcatgtaaacacatgaatataccaagagcttccattgagcatcagaatgtgggataaaaagaaacgaagaccgactattgactgtacaactggcggaacgcccagaaactaacaaattctttgtatggaaataactctgtaatactactactttggaaaaacaaaagtaatcctctaatgataaagcaactacccaacattcctgcacaaaatacacaaaacttgatggcataagaaaggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="-" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="68666" stop="28394"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29584" g_stop="29574" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="11" r_length="11" r_score="0.727"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29573" i_stop="29140" i_length="434">
            <donor d_prob="0.190" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29139" g_stop="28694" g_length="446"/>
          <reference_exon_boundary r_type="cDNA" r_start="12" r_stop="457" r_length="446" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="-" ref_id="SGN-E218230" ref_strand="-">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>457</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E218230" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="29584" e_stop="29574"/>
          <exon e_start="29139" e_stop="28694"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTTTTTGATGCGTGTTGACGTGTGTCTAAAAGACAATTACAGTAATATTTTTGATATATTATTATTTATGAATGATTTTTGGGGCAATAATTTTCATGTTCTCGTATTTTATTTTATTTTTGAATGAAAAATACTACTTCAAATCATTTTCATTAAATTTTTAAGACTTCTTTTTAAATCAAAAGTGATATATTTTGTTAAATGAACTTTTTATAATATGTTACTTATATAATGTTCAATTTCACATGCACATTCAGATGTTGAAAACAAACAGCATGAATTATTTAATGTCCAAATTTAGAAACCACATCTTAATATTCAGATTCAGACTTCTTAACCTTAATAGAAATTAATAAGGCCCTTACTCTCTCGAGTTGCCAGGAAAAATTCAACATTTAAACTACAGAAATTTTGGTGCTGAATATTCTGCAAGTTGAAAGCACATAATAATTGATCAACCTATACCGTGTGCAAAATAGGAAGGAGGCGAAGAATCGCGACAAGTACAACTCATTGCATAGGTGCCTGAAAATCAAAATGTCGCGAGTGCAGCTTATTTGAAACCATCCGATTGTAGGACTTACAAGATCAAATTACATTGATCTTTACTGCTACCACGGCAGCCCTTGTCAAAAGAGTCTCAATTCTCATGTAAACACATGAATATACCAAGAGCTTCCATTGAGCATCAGAATGTGGGATAAAAAGAAACGAAGACCGACTATTGACTGTACAACTGGCGGAACGCCCAGAAACTAACAAATTCTTTGTATGGAAATAACTCTGTAATACTACTACTTTGGAAAAACAAAAGTAATCCTCTAATGATAAAGCAACTACCCAACATTCCTGCACAAAATACACAAAACTTGATGGCATAAGAAAGGAT</genome_strand>
        <mrna_strand>TTTTTTTTTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTGATCAACCTATACCGTGTGCAAAATAGGAAGGAGGCGAAGAATCGCGACAAGTACAACTCATTGCATAGGTGCCTGAAAATCAAAATGTCGCGAGTGCAGCTTATTTGAAACCATCCGATTGTAGGACTTACAAGATCAAATTACATTGATCTTTACTGCTACCACGGCAGCCCTTGTCAAAAGAGTCTCAATTCTCATGTAAACACATGAATATACCAAGAGCTTCCATTGAGCATCAGAATGTGGGATAAAAAGAAACGAAGACCGACTATTGACTGTACAACTGGCGGAACGCCCAGAAACTAACAAATTCTTTGTATGGAAATAACTCTGTAATACTACTACTTTGGAAAAACAAAAGTAATCCTCTAATGATAAAGCAACTACCCAACATTCCTGCACAAAATACACAAAACTTGATGGCATAAGAAAGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E218013" ref_strand="-" ref_description="SGN-E218013 [cLEL-23-J19](-)">
      <seq>tttttttttttttttttttggaccaacctataccgtgtgcaaaataggaaggaggcgaagaatcgcgacaagtacaactcattgcataggtgcctgaaaatcaaaatgtcgcgagtgcagcttatttgaaaccatccgattgtaggacttacaagatcaaattacattgatctttactgctaccacggcagcccttgtcaaaagagtctcaattctcatgtaaacacatgaatataccaagagcttccattgagcatcagaatgtgggataaaaagaaacgaagaccgactattgactgtacaactggcggaacgcccagaaactaacaaattctttgtatggaaataactctgtaatactactactttggaaaaacaaaagtaatcctctaatgataaagcaactacccaacattcctgcacaaaatacacaaaacttgatggcataagaaagga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="-" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="62954" stop="28395"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29584" g_stop="29574" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="11" r_length="11" r_score="0.727"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29573" i_stop="29140" i_length="434">
            <donor d_prob="0.190" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29139" g_stop="28695" g_length="445"/>
          <reference_exon_boundary r_type="cDNA" r_start="12" r_stop="456" r_length="445" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="-" ref_id="SGN-E218013" ref_strand="-">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>456</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E218013" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="29584" e_stop="29574"/>
          <exon e_start="29139" e_stop="28695"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTTTTTGATGCGTGTTGACGTGTGTCTAAAAGACAATTACAGTAATATTTTTGATATATTATTATTTATGAATGATTTTTGGGGCAATAATTTTCATGTTCTCGTATTTTATTTTATTTTTGAATGAAAAATACTACTTCAAATCATTTTCATTAAATTTTTAAGACTTCTTTTTAAATCAAAAGTGATATATTTTGTTAAATGAACTTTTTATAATATGTTACTTATATAATGTTCAATTTCACATGCACATTCAGATGTTGAAAACAAACAGCATGAATTATTTAATGTCCAAATTTAGAAACCACATCTTAATATTCAGATTCAGACTTCTTAACCTTAATAGAAATTAATAAGGCCCTTACTCTCTCGAGTTGCCAGGAAAAATTCAACATTTAAACTACAGAAATTTTGGTGCTGAATATTCTGCAAGTTGAAAGCACATAATAATTGATCAACCTATACCGTGTGCAAAATAGGAAGGAGGCGAAGAATCGCGACAAGTACAACTCATTGCATAGGTGCCTGAAAATCAAAATGTCGCGAGTGCAGCTTATTTGAAACCATCCGATTGTAGGACTTACAAGATCAAATTACATTGATCTTTACTGCTACCACGGCAGCCCTTGTCAAAAGAGTCTCAATTCTCATGTAAACACATGAATATACCAAGAGCTTCCATTGAGCATCAGAATGTGGGATAAAAAGAAACGAAGACCGACTATTGACTGTACAACTGGCGGAACGCCCAGAAACTAACAAATTCTTTGTATGGAAATAACTCTGTAATACTACTACTTTGGAAAAACAAAAGTAATCCTCTAATGATAAAGCAACTACCCAACATTCCTGCACAAAATACACAAAACTTGATGGCATAAGAAAGGA</genome_strand>
        <mrna_strand>TTTTTTTTTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTGGACCAACCTATACCGTGTGCAAAATAGGAAGGAGGCGAAGAATCGCGACAAGTACAACTCATTGCATAGGTGCCTGAAAATCAAAATGTCGCGAGTGCAGCTTATTTGAAACCATCCGATTGTAGGACTTACAAGATCAAATTACATTGATCTTTACTGCTACCACGGCAGCCCTTGTCAAAAGAGTCTCAATTCTCATGTAAACACATGAATATACCAAGAGCTTCCATTGAGCATCAGAATGTGGGATAAAAAGAAACGAAGACCGACTATTGACTGTACAACTGGCGGAACGCCCAGAAACTAACAAATTCTTTGTATGGAAATAACTCTGTAATACTACTACTTTGGAAAAACAAAAGTAATCCTCTAATGATAAAGCAACTACCCAACATTCCTGCACAAAATACACAAAACTTGATGGCATAAGAAAGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E218089" ref_strand="-" ref_description="SGN-E218089 [cLEL-23-J19](-)">
      <seq>ttttttttttttttttttttgatcaacctataccgtgtgcaaaataggaaggaggcgaagaatcgcgacaagtacaactcattgcataggtgcctgaaaatcaaaatgtcgcgagtgcagcttatttgaaaccatccgattgtaggacttacaagatcaaattacattgatctttactgctaccacggcagcccttgtcaaaagagtctcaattctcatgtaaacacatgaatataccaagagcttccattgagcatcagaatgtgggataaaaagaaacgaagaccgactattgactgtacaactggcggaacgcccagaaactaacaaattctttgtatggaaataactctgtaatactactactttggaaaacaaaagtaatcctctaatgataaagcaactacccaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="-" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="68666" stop="28437"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29584" g_stop="29574" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="11" r_length="11" r_score="0.727"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29573" i_stop="29140" i_length="434">
            <donor d_prob="0.190" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29139" g_stop="28737" g_length="403"/>
          <reference_exon_boundary r_type="cDNA" r_start="12" r_stop="413" r_length="402" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="-" ref_id="SGN-E218089" ref_strand="-">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>414</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E218089" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="29584" e_stop="29574"/>
          <exon e_start="29139" e_stop="28737"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTTTTTGATGCGTGTTGACGTGTGTCTAAAAGACAATTACAGTAATATTTTTGATATATTATTATTTATGAATGATTTTTGGGGCAATAATTTTCATGTTCTCGTATTTTATTTTATTTTTGAATGAAAAATACTACTTCAAATCATTTTCATTAAATTTTTAAGACTTCTTTTTAAATCAAAAGTGATATATTTTGTTAAATGAACTTTTTATAATATGTTACTTATATAATGTTCAATTTCACATGCACATTCAGATGTTGAAAACAAACAGCATGAATTATTTAATGTCCAAATTTAGAAACCACATCTTAATATTCAGATTCAGACTTCTTAACCTTAATAGAAATTAATAAGGCCCTTACTCTCTCGAGTTGCCAGGAAAAATTCAACATTTAAACTACAGAAATTTTGGTGCTGAATATTCTGCAAGTTGAAAGCACATAATAATTGATCAACCTATACCGTGTGCAAAATAGGAAGGAGGCGAAGAATCGCGACAAGTACAACTCATTGCATAGGTGCCTGAAAATCAAAATGTCGCGAGTGCAGCTTATTTGAAACCATCCGATTGTAGGACTTACAAGATCAAATTACATTGATCTTTACTGCTACCACGGCAGCCCTTGTCAAAAGAGTCTCAATTCTCATGTAAACACATGAATATACCAAGAGCTTCCATTGAGCATCAGAATGTGGGATAAAAAGAAACGAAGACCGACTATTGACTGTACAACTGGCGGAACGCCCAGAAACTAACAAATTCTTTGTATGGAAATAACTCTGTAATACTACTACTTTGGAAAAACAAAAGTAATCCTCTAATGATAAAGCAACTACCCAACA</genome_strand>
        <mrna_strand>TTTTTTTTTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTGATCAACCTATACCGTGTGCAAAATAGGAAGGAGGCGAAGAATCGCGACAAGTACAACTCATTGCATAGGTGCCTGAAAATCAAAATGTCGCGAGTGCAGCTTATTTGAAACCATCCGATTGTAGGACTTACAAGATCAAATTACATTGATCTTTACTGCTACCACGGCAGCCCTTGTCAAAAGAGTCTCAATTCTCATGTAAACACATGAATATACCAAGAGCTTCCATTGAGCATCAGAATGTGGGATAAAAAGAAACGAAGACCGACTATTGACTGTACAACTGGCGGAACGCCCAGAAACTAACAAATTCTTTGTATGGAAATAACTCTGTAATACTACTACTTTGG-AAAACAAAAGTAATCCTCTAATGATAAAGCAACTACCCAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E217874" ref_strand="-" ref_description="SGN-E217874 [cLEL-23-K17](-)">
      <seq>ttttttttttttttttttttgatcaacctataccgtgtgcaaaataggaaggaggcgaagaatcgcgacaagtgcaactcattgcataggtgcctgaaaatcaaaatgtcgcgagtgcagcttatttgaaaccatccgattgtaggacttacaagatcaaattacattgatctttactgctaccacggcagcccttgtcaaaagagtctcaattctcatgtaaacacatgaatataccaagagcttccattgagca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="-" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="68666" stop="28595"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29584" g_stop="29574" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="11" r_length="11" r_score="0.727"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29573" i_stop="29140" i_length="434">
            <donor d_prob="0.190" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29139" g_stop="28895" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="12" r_stop="256" r_length="245" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="-" ref_id="SGN-E217874" ref_strand="-">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>256</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E217874" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="29584" e_stop="29574"/>
          <exon e_start="29139" e_stop="28895"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTTTTTGATGCGTGTTGACGTGTGTCTAAAAGACAATTACAGTAATATTTTTGATATATTATTATTTATGAATGATTTTTGGGGCAATAATTTTCATGTTCTCGTATTTTATTTTATTTTTGAATGAAAAATACTACTTCAAATCATTTTCATTAAATTTTTAAGACTTCTTTTTAAATCAAAAGTGATATATTTTGTTAAATGAACTTTTTATAATATGTTACTTATATAATGTTCAATTTCACATGCACATTCAGATGTTGAAAACAAACAGCATGAATTATTTAATGTCCAAATTTAGAAACCACATCTTAATATTCAGATTCAGACTTCTTAACCTTAATAGAAATTAATAAGGCCCTTACTCTCTCGAGTTGCCAGGAAAAATTCAACATTTAAACTACAGAAATTTTGGTGCTGAATATTCTGCAAGTTGAAAGCACATAATAATTGATCAACCTATACCGTGTGCAAAATAGGAAGGAGGCGAAGAATCGCGACAAGTACAACTCATTGCATAGGTGCCTGAAAATCAAAATGTCGCGAGTGCAGCTTATTTGAAACCATCCGATTGTAGGACTTACAAGATCAAATTACATTGATCTTTACTGCTACCACGGCAGCCCTTGTCAAAAGAGTCTCAATTCTCATGTAAACACATGAATATACCAAGAGCTTCCATTGAGCA</genome_strand>
        <mrna_strand>TTTTTTTTTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTGATCAACCTATACCGTGTGCAAAATAGGAAGGAGGCGAAGAATCGCGACAAGTGCAACTCATTGCATAGGTGCCTGAAAATCAAAATGTCGCGAGTGCAGCTTATTTGAAACCATCCGATTGTAGGACTTACAAGATCAAATTACATTGATCTTTACTGCTACCACGGCAGCCCTTGTCAAAAGAGTCTCAATTCTCATGTAAACACATGAATATACCAAGAGCTTCCATTGAGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E347153" ref_strand="+" ref_description="SGN-E347153 [cTOF-25-O15]">
      <seq>aacggtaaatccagacctatgaggaggaaatgcagtaatgtaagatcgtatttgacaaatggtaccattaatgttgagtatgtcaaatcttgtgataatcttgcagatcctcttacgaaggtcttaacaagagaaaaggtctggagcacatcgagggggataggattgaagcctacaaatccttcagtcatatatgaggaaactcaacctgnggaatagagatcctataaccaggttcaaagggaaaaactaatcatatgatgacttgttatgaaaaatacactattttttccctccctatgatgtgagtgcatttgttcctatagtttgtgaaggttgagttgataaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="38175" stop="39125"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38475" g_stop="38825" g_length="351"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="351" r_length="351" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E347153" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>351</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E347153" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38475" e_stop="38825"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACGGTAAATCCAGACCTATAAGGAGGAAACACAGTAATGTAAGATCGTATTTGACAAATGGTACCATTAATGTTGATTATGTCAAATCTTGTGATAATCTTGCAGATCCTCTTACGAAGGCCTTAACAAGAGAAAAGTCCTGGAGCACATCGAGGGGGATGGGATTGAAGCCTACAAATCCTTGAGTCATATATGAGGAAACACAACCTGGGGAATAGATATCCTATAACCACGTTCAAAGGGAAAAACTAATCATATGATGACTTTTTGTGAAAAATGCACTATTTTTCCCCTCCCTATGATGTGAGTGCATTGTTTCCTGTAGTTTGTGAAGGTTGAGTTGATAAAAA</genome_strand>
        <mrna_strand>AACGGTAAATCCAGACCTATGAGGAGGAAATGCAGTAATGTAAGATCGTATTTGACAAATGGTACCATTAATGTTGAGTATGTCAAATCTTGTGATAATCTTGCAGATCCTCTTACGAAGGTCTTAACAAGAGAAAAGGTCTGGAGCACATCGAGGGGGATAGGATTGAAGCCTACAAATCCTTCAGTCATATATGAGGAAACTCAACCTGNGGAATAGAGATCCTATAACCAGGTTCAAAGGGAAAAACTAATCATATGATGACTTGTTATGAAAAATACACTATTTTTTCCCTCCCTATGATGTGAGTGCATTTGTTCCTATAGTTTGTGAAGGTTGAGTTGATAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E728374" ref_strand="+" ref_description="SGN-E728374 [LA17CE03]">
      <seq>agatgatcaaccaggttctttctcatcttagcgggttatctgatcagggccagacacctccagtgtttcctgtaccagcacctcaggttccgggagtacaacatgcagctgttgtggctctccgcatggatgcctcattggaaataggcacatttcctcgattgactacagggcctataatgacgagtgatcaacatgaacttttcactaaattcttgaagttgaaacctctagtcttcaagggtgctgaatctgaggatgcctatgattttcttgttgattgtcatgagctgctacataagatggacatagtagaacggttcggggttgagtttgtgacctatcaatttcagggaaatgtcaaaatgtggtggcggtcgtatgttgagtgtcaaccagcacagcaccacctatgacttgggcatcattctctagcttatttatggaaaagtgtataccccggacgttgagggataggaggagagatgagttcctgagtctatagcaaggcaggatgtctgttactgcttatgaggctaaattttgtgcactatccaggtatgccacccagctttgcttcagtccacaagagcggattcaccgttttgtgaaaggattgaggtcagatttgcagatcccagccctacaggtagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="45962" stop="47217"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46262" g_stop="46917" g_length="656"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="655" r_length="655" r_score="0.916"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E728374" ref_strand="+">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>656</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E728374" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46262" e_stop="46917"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATGATTAACCAGGTTCTTACTTATGTTAGCGGGTTATCTGATTAGGGACAGACACCTCCAGTGTTTTCTGCATCAGCACCTCAGGTTCCGGTAATACAACATGCAGCTGCTGTGGCTCCCCGCATGGATGCCTTATTGGAAGTAGGCATGTTTCCTCGATTGACTACAAGGTCTATAATGACGAGTAATCAACATGAACTTTTCACTAAATTCTTAAAGTTGAAACCTCCAGTCTTCAAGGGTGCTGAATCTGAGGATGCCTATGATTTTCTGGCTGATTGTCATGAGCTGCTACATAAGATGGACATAGTAGAATGATTCGGTGTTGAGTTTGTGACCTACCAGTTTTAGGGGAATGCCAAAATGTGGTGGCAGTCGTATGTTGAGTGTCAACCAGCACAGGCACCACCTATGACTTGGGCATCATTCTCTAGCTTATTTATGAAGAAATATATACCCTAGACTTTGAGGGACAAGAAGAGAGATGAGTTCCTGAGCCTACTGTAAGGCAGGATGTTTGTTACTACTTATGAGGCTAAATTTCGGGCACTATCCAGGTATGCCACCCAGCTTTGCTTCAGTCCACAAGAGCGGATTCGCCTTTTTGTGAAAGGATTGAGGTCAGATTTGCAGATCCCAGCCTTACAGGTAGCT</genome_strand>
        <mrna_strand>AGATGATCAACCAGGTTCTTTCTCATCTTAGCGGGTTATCTGATCAGGGCCAGACACCTCCAGTGTTTCCTGTACCAGCACCTCAGGTTCCGGGAGTACAACATGCAGCTGTTGTGGCTCTCCGCATGGATGCCTCATTGGAAATAGGCACATTTCCTCGATTGACTACAGGGCCTATAATGACGAGTGATCAACATGAACTTTTCACTAAATTCTTGAAGTTGAAACCTCTAGTCTTCAAGGGTGCTGAATCTGAGGATGCCTATGATTTTCTTGTTGATTGTCATGAGCTGCTACATAAGATGGACATAGTAGAACGGTTCGGGGTTGAGTTTGTGACCTATCAATTTCAGGGAAATGTCAAAATGTGGTGGCGGTCGTATGTTGAGTGTCAACCAGCACA-GCACCACCTATGACTTGGGCATCATTCTCTAGCTTATTTATGGAAAAGTGTATACCCCGGACGTTGAGGGATAGGAGGAGAGATGAGTTCCTGAGTCTATAGCAAGGCAGGATGTCTGTTACTGCTTATGAGGCTAAATTTTGTGCACTATCCAGGTATGCCACCCAGCTTTGCTTCAGTCCACAAGAGCGGATTCACCGTTTTGTGAAAGGATTGAGGTCAGATTTGCAGATCCCAGCCCTACAGGTAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E394130" ref_strand="+" ref_description="SGN-E394130 [TUS-40-N13](-)">
      <seq>tggaggttctgggaactttgtggcatggaggaaggttttaacccagttcaattcatatacatcgatcctacggtgattatagattatacatgtaaagctttattgaaggaacaacttaaagttttggcttctggatttatcgtcatctgaagaatcatcaatgcatcactgttgtttctgtggtaacattcagtttacgatggtagttagtaagtaaattgaaaggctttgcgccattggtgtcagattttgggttttcaaatttcttgttgtaccctagattttaccgctgcttgattagttttactactcccatcctgttccattttactttgattgtcatagttgacttgacacaacttaattcaaaaatgaaagcattgatcttaaacataaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="-" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="60852" stop="59850"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60552" g_stop="60159" g_length="394"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="394" r_length="394" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="395" polyA_stop="409"/>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="-" ref_id="SGN-E394130" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>394</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E394130" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60552" e_stop="60159"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAGGTTCTGGGAACTTTGTGGCATGGAGGAAGGTTTTAACCCAGTTCAATTCATATACATCGATCCTACGGTGATTATAGATTATACATGTAAAGCTTTATTGAAGGAACAACTTAAAGTTTTGGCTTCTGGATTTATCGTCATCTGAAGAATCATCAATGCATCACTCTTGTTTCTGTGGTAACATTCAGTTTACGATGGTAGTTAGTAAGTAAATTGAAAGGCTTTGCGCCATTGGTGTCAGATTTTGGGTTTTCAAATTTCTTGTTGTACCCTAGATTTTACCGCTGCTTGATTAGTTTTACTACTCCCATCCTGTTCCATTTTACTTTGATTGTCATAGTTGACTTGACACAACTTAATTCAAAAATGAAAGCATTGATCTTAAACAT</genome_strand>
        <mrna_strand>TGGAGGTTCTGGGAACTTTGTGGCATGGAGGAAGGTTTTAACCCAGTTCAATTCATATACATCGATCCTACGGTGATTATAGATTATACATGTAAAGCTTTATTGAAGGAACAACTTAAAGTTTTGGCTTCTGGATTTATCGTCATCTGAAGAATCATCAATGCATCACTGTTGTTTCTGTGGTAACATTCAGTTTACGATGGTAGTTAGTAAGTAAATTGAAAGGCTTTGCGCCATTGGTGTCAGATTTTGGGTTTTCAAATTTCTTGTTGTACCCTAGATTTTACCGCTGCTTGATTAGTTTTACTACTCCCATCCTGTTCCATTTTACTTTGATTGTCATAGTTGACTTGACACAACTTAATTCAAAAATGAAAGCATTGATCTTAAACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E235821" ref_strand="+" ref_description="SGN-E235821 [cLED-15-H17]">
      <seq>gatcctctgtgtactttcctctatgatacatcgcgtcctaaacttattcacgaaacaaacctggatgttctttgtgaactggttaatatcctcaaagttgaagttctaggagaacagctgagcagacggaggaagtcattggctgggttacctccaacgctagacaggattctagctaatgttcatgaacgattaacttttcgtgctcgcacctatatccgtgatgagattgcaaattatcttccttcagacgaggatctgggattaccctaagaagttggagcaatctgtttcagcagaactggattcaccatctaagtttgcattctcttgtgaaggttgcagtttgatatatggaggttctgtaaatcaatatcttgctcaagggtgtgaactgactattcttgacctgtgattctagttggatgcatatattccatttttatatttgtgcaggactaatatattagaagcacacgtttaggtgctatcccttctgaaaaaagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="-" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="62876" stop="60453"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62576" g_stop="62357" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="9" r_stop="228" r_length="220" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62356" i_stop="61167" i_length="1190">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="61166" g_stop="61079" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="316" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="61078" i_stop="60945" i_length="134">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.887" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60944" g_stop="60753" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="508" r_length="192" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="-" ref_id="SGN-E235821" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>500</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E235821" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62576" e_stop="62357"/>
          <exon e_start="61166" e_stop="61079"/>
          <exon e_start="60944" e_stop="60753"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGTACTTTCCTCTATGATACATCGCGTCCTAAACTTATTCACGAAACAAACCTGGATGTTCTTTGTGAACTGGTTAATATCCTCAAAGTTGAAGTTCTAGGAGAACAGCTGAGCAGACGGAGGAAGTCATTGGCTGGGTTACCTCCAACGCTAGACAGGATTCTAGCTAATGTTCATGAACGATTAACTTTTCGTGCTCGCACCTATATCCGTGATGAGGTAACATCCCAAGTATTGCTCGGACATTTTATTTAAATGCTGTTTGGCGACTTATCTGTTACTCGGACATGAGATGATATTATCACTTAATCAGCACCCTCGTGGATGAATGAGTAGTGCCAAAATTAGTTACTGGATAAATTAGGCATTCGTTTCCTGTTGCATTGATTTTGGTTAAATTAGGCCTCATGGTATATACCGTATACTATTGCTCATAGCTTAGCGTTTTCTCTTTATTGTTCTCTTAGCTGCACTATCTTCCATTGTTGTGATACGTAGTACCTTCAAACAAAATCGCCCATCAGTGGAAGTGAGTAATTCTCCATTGGAGTTTGAAGCTTTTATATTTTCCATTCTTTCTTATGATCAGGTTATCATGATAGCTTTCTCGAAAGTTGATTCTTGCGCGGTGGGAGGAATATGCTTTGTGGCAGACTTCTGACAATTGGACATATCAAATAGGCTCTTGAGTGAATTATACCAATTTATGTGACGTTAAGTAACCTTTTGGAATTTGAATCTAGTATGTACTTCATCCTTTTCTGAAATACTTAGTTTCACTTGTGTTGGAGATAATAAGGAAAAATGAAAATTTAGAAGGTTGTAGATTATAGTTTCCCTTTTATAGCCTTGAATAATTTTATAAAAAGGCACTATGGTTGTGCTACCTAGGTACAAAAAGAGCACCCAACATCTGATTTATTTACAAGTTTATGGAAAAACATGGGCCTATCCATCATTGTGAGGGAACTTTTCATGTTTACCTTATTTTTGGTACTGTTGATTTGGTATTTGTTCAATGTTCATTCGGCTCCGAGATAATATTTTCTCCTCCCTCCATATTTCCGTTTTCTACTCCGTGCATCATTTGTTTGGATTAACAATGCAAAGTGGTATGATCTTCAATGTTGTATAACGTTCGCTTGAGATGTCTTTAAATGAGAAACATGGTCAGTGATGATTGTAGTAGTTGTTGCTAGGAGTTCTAATGGATTTGTATGGAGATGCAAAATGTCTATTAAATATGATAAATTGGGATTGATAAGAGAAAGAATTAGACCATATAAGTTGGGATGAATGGAGTAAGGAGCACATATGTATGTTTGGTTTCTGTATGCTTGAATTTCCTTACAAGTAACCAGTGGTCTACAAATAATTTGGTCTGATTTCTTTCCCTGCTTTGTTTTCAGATTGCAAATTATCTTCCTTCAGACGAGGATCTGGGATTACCCTAAGAAGTTGGAGCAATCTGTTTCAGCAGAACTGGATTCACCATCTGTAAGTACCAAATTCTTTGTCCTGTGACGGGCATTCAGTTGATTTTTGTAACATATATCTTTAAAGGAATTAAGAGCTAGGACAACTTTTATATGTATCTTTATTTTTGGGGGTCTGTAATTTTTTTGGTGCAGAAGTTTGCATTCTCTTGTGAAGGTTGCAGTTTGATATATGGAGGTTCTGTAAATCAATATCTTGCTCAAGGGTGTGAACTGACTATTCTTGACCTGTGATTCTAGTTGGATGCATATATTCCATTTTTATATTTGTGCAGGACTAATATATTAGAAGCACACGTTTAGGTGCTATCCCTTCTGAAAAAAGAA</genome_strand>
        <mrna_strand>GTGTACTTTCCTCTATGATACATCGCGTCCTAAACTTATTCACGAAACAAACCTGGATGTTCTTTGTGAACTGGTTAATATCCTCAAAGTTGAAGTTCTAGGAGAACAGCTGAGCAGACGGAGGAAGTCATTGGCTGGGTTACCTCCAACGCTAGACAGGATTCTAGCTAATGTTCATGAACGATTAACTTTTCGTGCTCGCACCTATATCCGTGATGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAAATTATCTTCCTTCAGACGAGGATCTGGGATTACCCTAAGAAGTTGGAGCAATCTGTTTCAGCAGAACTGGATTCACCATCT......................................................................................................................................AAGTTTGCATTCTCTTGTGAAGGTTGCAGTTTGATATATGGAGGTTCTGTAAATCAATATCTTGCTCAAGGGTGTGAACTGACTATTCTTGACCTGTGATTCTAGTTGGATGCATATATTCCATTTTTATATTTGTGCAGGACTAATATATTAGAAGCACACGTTTAGGTGCTATCCCTTCTGAAAAAAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E265693" ref_strand="+" ref_description="SGN-E265693 [cLEI-11-A1]">
      <seq>tcaggctgcaataagaagcagcggtggtaacaagacatcttttgccgagggtgtagagccatctataatatatgtacgattcaaggctgcagcaaatgagcttaagcctatcctggaggaaattgaaagcagaacacctagaaaagagtatattcaacttcttgaagaatgccacaaactctattgcgaacagcgcctttccttgataagaggtatagtgcaacagcggatctctgaattttctaggaaagaagcattgtcgtctttaactagatctggatgtgcatatttaatgcaggtgtgtcagctggagcatcaactcttcaatcacttctttccatcatcttcagaggacatttcgagtttgactcctcttgtagatcctctgtgtactttcctctatgatacatcgcgtcctaaacttattcacgaaacaaacctggatgttctttgtgaactggttaatatcctcaaagttgaagttctaggagaacagctgagcagacggaggaagtcattggctgggttacctccaacgctagacaggattctagctaatgttcatgaacgattaacttttcgtgctcgcacctatatccgtgatgaggttatcatgatagctttctcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="-" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="67894" stop="61666"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67594" g_stop="67495" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="100" r_length="100" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="67494" i_stop="67327" i_length="168">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="67326" g_stop="67222" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="101" r_stop="205" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="67221" i_stop="67112" i_length="110">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67111" g_stop="67019" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="298" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="67018" i_stop="66482" i_length="537">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.906" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="66481" g_stop="66393" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="299" r_stop="387" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="66392" i_stop="62577" i_length="3816">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.836" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62576" g_stop="62357" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="388" r_stop="607" r_length="220" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="62356" i_stop="61987" i_length="370">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="61986" g_stop="61966" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="608" r_stop="628" r_length="21" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="-" ref_id="SGN-E265693" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>628</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E265693" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67594" e_stop="67495"/>
          <exon e_start="67326" e_stop="67222"/>
          <exon e_start="67111" e_stop="67019"/>
          <exon e_start="66481" e_stop="66393"/>
          <exon e_start="62576" e_stop="62357"/>
          <exon e_start="61986" e_stop="61966"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGGCTGCAATAAGAAGCAGCGGTGGTAACAAGACATCTTTTGCCGAGGGTATAGAGCCATCTATAATATATGTACGATTCAAGGCTGCAGCAAATGAGGTAATATTGGAACATCTCCTTGCCTTTTAGTTAGTAGAATAGAAACTCTATTAATTCGTTGTATGGCAGTGAGTATTTCTAATCTCAAAAAAAAAAAAAAAAAGAGAAAGAAACTAGGACTAGCTTTTACGTGTAATCCATGAACCAAATGAACCTAGTTACCTGCAGCTTAAGCCTATCCTGGAGGAAATTGAAAGCAGAACACCTAGAAAAGAGTATATTCAACTTCTTGAAGAATGCCACAAACTCTATTGCGAACAGCGCCTTTCCTTGGTAAGTAGTAAGCTGCTCCTTTCAGTTCTATATATATAATTAAATATATGGTTTTTTTCTTCTCCTTCTTTCATCGTTAATCAATACTCGTTCTGTTTCATTTAATTCAGATAAGAGGTATAGTGCAACAGCGGATCTCTGAATTTTCTAGGAAAGAAGCATTGTCGTCTTTAACTAGATCTGGATGTGCATATTTAATGCAGGTACATTCAATGACATCAGTAATATTTACAACATTTTGTACTAGAGCATGGTATGATTGTTATATCTTGCCTTACAAAAATTGGATGACTGTTCTTTTTGTGGTGTTTGGTGGGGGTATAAGAAGAAGATGAAAAGAGACAATTCGAGGTTGACCTACCAGTTTTGATAGTCATATGAGCAATCGACATCATTTTTCTTTTATTTGACAGGATTAATTCAAAGTAATTAGTTCTCATTCTCAAAAAAATCAAAGTAATTTGTTGTAAATAAGAGAGCCACTCCTTATTTTTTCTTTCAACAGTTAGCTCATGTTAGTGTAGATGAATATTTCCTCTAATTGGATTTAGGATAAATGTGCTAAAACTATAACAGCCTTGATTTCTTTGAGGGTGGAATCATAACTTCTATATATTTTTCTATGAATCACTATTGTCAAAGTAAATATCTGATGTTGCTTCAGACAGTTTTTCTAAAGGTATATATGGGTAAACTGTGATATATGTCTCCATACCTTACGTTTGACATCGTAAATGCAGGTGTGTCAGCTGGAGCATCAACTCTTCAATCACTTCTTTCCATCATCTTCAGAGGACATTTCGAGTTTGACTCCTCTTGTAGATCCTCTGTGAGTTGCTTAACTTCTCTTGTGGGGTTCCTTCTGCATTTGAACAATTTTTGCTTCTTACTGATTTCCTTTCCCACTTCTTCTTTTCTAGTTTGCTTCTTTTTTCCTTTTCTTGTCTTGGTTTGTTTGGGGGTGGGGGAGGTTTGGATTATCTGTATTGTTTTTCACGCGACTTGTAAACAAGAGAGCCGCAACATAGCAAAATTTTTGTGCCAGTAAGACTTTGCTATTTTGGTAGCTTGTGCCATGCTTAAACCTTCTTAGGCCAGAGTTGCTATCAGCGGTAAGTGTGTGTAAACATTTTCAGACATTATTTGTGTGCTAATAAAAATCAGTGTGGACCATGAGGCTGCCCAATAGCTTAGTGATTGTCACTTTAGATCTTAGGGCTAGCACAAGATAAGTTCCTGGTTTGGAATTTGAAGCAGTCCTGAGGGATGTACAGCTATCTATTCCTCTGAAAGAGCTGCTCAGATTTCCCTCTGGTTTAGATTTGCAGGTTGCTCTGGCCATCAGTTATGAATATGTGCTATGTTTATATATCAAGTTAGTCTGGTCATCATTTGCTTCTGCTTCAACTGCTTTTATGACCTTAAATCTTTGGCTTTGAGATACAAATGTGGAGGTTAAATGTGAAAGTTATAGTAAATTCAAGCGAACCTGGTATTTCAAGTATATGCGTTCACTTATTCTCCAAAACATAAGTATAAGCTTTAACTCAAAAGGTGGTTAAACAACTACTTTTTGATAAAGAAGGTAGCAGAGAAATTATTTAAGTGAAGATTAAAGGGTTGGCTCATCACCTATTAAGAGTTTCAAAATGTGTGTTTGTTGCCCTTAATATTTGTCGGTTAGGTAAAAAAGCATCTTCTACGTCCAAAAAAGTAAAATCATGAAGTCTGGTAAAGCCTCATTTGTCTTCACTAAGCTGAGGATGTTCGGATTAAGTACACATCTAAATATTAAGATTTAGATATCTGAATCTGAATGCACATGAATATTTAAGATGTATTAAAAACTATATACTAAATGTTTAGGACGGTTTGATTTTCAAAAATTGAACATATTAATGTTTTTATTTATAAATTAATAAATATGAAGTTAAAAAACAAAATACTATATTTATCTCCTATTGTATCTTTAAAAAATTATATGGTGTTGGAGGTGGTGATTTCTCGTGGTGGTGGTTGTGAGTAGTAGCTAGTTGTGATGGTCGGTAGTTAGTAGTGGCGGCTAATAGTTTTGTAGTGGATAATAGTAATAGTTATTGGTGGTGATGAATGATAATGGTGGTTTGACTATACATAGCGGTGATTGTCAGTAGTGATTAATATTTGTTGTGGTAATGGTTGTTGGTGCTGGCAATTGTAAATGTGCTGTCAATAACCAACCCAAACCTAATTGGTTTGGATTTAATTTTGCCACCCCTATTCAAACCCATTTAATTTTTCTTTCTTATTAAATAACATATAAAATCAAAGAAAAAAAATTAAAAATATTTTAACAAAATTTCTCAAAAATCATTTTGTTTTACATATCAACTCAATTTTTAATGGGTTGAAATGGTTTGGGTTGAGCAAACAAATGGGCGGTCAATAACCAACCCAAACTTAAATGGGTTGGGTTTAATTTTTCCACCCTATTCAAACCCATTTAGTGCTTGTAACATGAAAAAAAAATGTACTTAATGATTGACATTTGAATGATTCAGATCTAAAAACCAAACGGACTTAATGACTGACAAATGAATGGTTAAGATTAAGACTATTATTAAATGCAAACAGATGAGGCCTAAGGAAACCTAATTGTTGTCAGTTACTACGTGTGATGTGTTTCTTTGTGATATGCTGACTTCTCTTACTATCTGGGGCTTCCAGTCACTCGGAGCGCAAAGCGGTAAAAACTGACACGGTCCCGCTTCAAGCTTTAAGTGAAGTGCTTGCTTCATTGAAGTGAAATCAAAAGAAAAAAGACCAAAATAAATAGAGACAAAATATATAAGAAAAAATTCATATTAAAACCAAATAAAGGCCCCCTTTATTTCCTTGTCACAAAACAGACATACTATTCTTATCCTATTGGTATCACCAACTTTTTTCCCATATTTTCATCCCGGGCTAGCCATTTTACATCACGGATAAGATTTGAGAAAAATAATCAACACCTATATTTTTATCATTATAAAAGAAAAAATTCAACATTTTAGTCATTGTTAAGAAACAAAACAATTCAGCAATATATATTTGATCACTGTGAGGGAAAAAATTTCGGCAACATATAATTTAAATAATCAAAGCTATACATGACAAAGGAAAGCAGAGTAACGAAAAGAGTAGCAAAAAAGAAGAAAGTCCTAGCTAGCAGTGCCACTGCACCAAAATGAAGAAGAAAGAAGAGAAAACGAAGAAAGAAAAGAGAAAAAGTACTGGAAGGAAAAAGTACACAGAAACTTTACTATTCTAATTTCTTAAGGATTAGGTAAGTCATACCTCTTTTTATTATTTAAAGGTGACCACTTCCTAATTTTTTAAAAAAAACCGCTGCTTTTCTCGCTTCACCGCTTCTGGTCGCATCGCGCTTCAAGCCCAGAAGCAGCCGCTTCTTTCACATGCCTCGCTTCAGCTGGCTGAAGTGCTGAACTCTCGCTTCGCTTCACTGCTTAAAGCGATGAAGCACTTGCTTTCCTGAACACTGCCCCCATGGGTGATATATGAAATGAGATGTCCATTATACCTATACCTTTCTTTTGGTTCATAAGTTCTCTTTTTTCCTTCTCTGGTATTTTAATGTACATGTATGTCCTTCCTGATTGTGGGGCAGAGAGATAGAAAGCCTTGCACTTTTATCCATCAAAATTTGACCTCGAATATAAGCTGTACCATATTTATAGTTTTTCTTGTCAAGTTAATGTGATTAGATAATATCAATGGAGGGAGTTACAGTTACTGATAGTCGAATCTAATGGCAGATTTCAGTGTTAGTAAGTTAATCAGCAGTGAAACATGTACCTTTCATATATGAGAAGGTAATGGAACGTGTTATTTGGTTCACTTGATAACATTACTTTTTATCTTTGCTCCATTCTAGTAATTGGAGATTCGCAATCAGATATTCTCTACCCCCTGCATTCTCAAGCTACATTTCTACTTGCCTCCTTTATTTATAAATATTCTTATTTATGTAGTCCATGATAAGTCATGTTTTTGAGCTTATGTCCTCTGCATAACATGATATGAATATTCTGTGCATAGCATATATATCCATGTGCTCCCACCCCATCTCTCAGTTGGTCCAATTACAAGCAGTTTAATGAAGCGTTGACATGTTATACTCCCTCCATCCCGTTTTAGGTTATGGTGTTTACTGAGCATGGAGTTTAAAAAAGAAAGAAAGAGTTTGAAAATTTTGGTCTATAGTAGGCCCACTTAGTCTACCCTTGAGCTGAGGGTCTTTCGGAAACAACCTTTCTACCTACACAAGGTAGTGGTAAGGTCTGCATTCACTCTACCTTCCCCCGATCCCACTTAGTGGGATTCCATTGGATATGTTGTTGTTGTGATCTATAACAGACCATAGACACTTGTATGACAATAAATAATATCATTAAGGTTAGAAATGCAAGTTTAAAGGAAAAGTTGTCAATTCTTTTTTGGATAGACGAACAAGGAAAATGTGTTGTATAAAAATTGGACAAAGGAAATACTGTCTATATGCCCCTGAAGCTGCTGGAATTTGAGCTTTTTTTTTTTTTTTTAATGATAAGTAGCTTGATCTCTATGTCTCTTAAGGTTACAATTACCTCCCTACAAACTGCAGGTGTACTTTCCTCTATGATACATCGCGTCCTAAACTTATTCACGAAACAAACCTGGATGTTCTTTGTGAACTGGTTAATATCCTCAAAGTTGAAGTTCTAGGAGAACAGCTGAGCAGACGGAGGAAGTCATTGGCTGGGTTACCTCCAACGCTAGACAGGATTCTAGCTAATGTTCATGAACGATTAACTTTTCGTGCTCGCACCTATATCCGTGATGAGGTAACATCCCAAGTATTGCTCGGACATTTTATTTAAATGCTGTTTGGCGACTTATCTGTTACTCGGACATGAGATGATATTATCACTTAATCAGCACCCTCGTGGATGAATGAGTAGTGCCAAAATTAGTTACTGGATAAATTAGGCATTCGTTTCCTGTTGCATTGATTTTGGTTAAATTAGGCCTCATGGTATATACCGTATACTATTGCTCATAGCTTAGCGTTTTCTCTTTATTGTTCTCTTAGCTGCACTATCTTCCATTGTTGTGATACGTAGTACCTTCAAACAAAATCGCCCATCAGTGGAAGTGAGTAATTCTCCATTGGAGTTTGAAGCTTTTATATTTTCCATTCTTTCTTATGATCAGGTTATCATGATAGCTTTCTCG</genome_strand>
        <mrna_strand>TCAGGCTGCAATAAGAAGCAGCGGTGGTAACAAGACATCTTTTGCCGAGGGTGTAGAGCCATCTATAATATATGTACGATTCAAGGCTGCAGCAAATGAG........................................................................................................................................................................CTTAAGCCTATCCTGGAGGAAATTGAAAGCAGAACACCTAGAAAAGAGTATATTCAACTTCTTGAAGAATGCCACAAACTCTATTGCGAACAGCGCCTTTCCTTG..............................................................................................................ATAAGAGGTATAGTGCAACAGCGGATCTCTGAATTTTCTAGGAAAGAAGCATTGTCGTCTTTAACTAGATCTGGATGTGCATATTTAATGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTCAGCTGGAGCATCAACTCTTCAATCACTTCTTTCCATCATCTTCAGAGGACATTTCGAGTTTGACTCCTCTTGTAGATCCTCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTACTTTCCTCTATGATACATCGCGTCCTAAACTTATTCACGAAACAAACCTGGATGTTCTTTGTGAACTGGTTAATATCCTCAAAGTTGAAGTTCTAGGAGAACAGCTGAGCAGACGGAGGAAGTCATTGGCTGGGTTACCTCCAACGCTAGACAGGATTCTAGCTAATGTTCATGAACGATTAACTTTTCGTGCTCGCACCTATATCCGTGATGAG..................................................................................................................................................................................................................................................................................................................................................................................GTTATCATGATAGCTTTCTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E266187" ref_strand="+" ref_description="SGN-E266187 [cLEI-3-I11]">
      <seq>tcaggctgcaataagaagcagcggtggtaacaagacatcttttgccgagggtatagagccatctataatatatgtacgattcaaggctgcagcaaatgagcttaagcctatcctggaggaaattgaaagcagaacacctagaaaagagtatattcaacttcttgaagaatgccacaaactctattgcgaacagcgcctttccttgataagaggtatagtgcaacagcggatctctgaattttctaggaaagaagcattgtcgtctttaactagatctggatgtgcatatttaatgcaggtgtgtcagctggagcatcaactcttcaatcacttctttccatcatcttcagaggacatttcgagtttgactcctcttgtagatcctctgtgtactttcctctatgatacatcgcgtcctaaacttattcacgaaacaaacctggatgttctttgtgaactggttaatatcctcaaagttgaagttctaggagaacagctgagcagacgggagaagtcattggctgggttacctccaacgctag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="-" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="67894" stop="62122"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67594" g_stop="67495" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="100" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="67494" i_stop="67327" i_length="168">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="67326" g_stop="67222" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="101" r_stop="205" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="67221" i_stop="67112" i_length="110">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67111" g_stop="67019" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="298" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="67018" i_stop="66482" i_length="537">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.906" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="66481" g_stop="66393" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="299" r_stop="387" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="66392" i_stop="62577" i_length="3816">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.836" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62576" g_stop="62422" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="388" r_stop="542" r_length="155" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="-" ref_id="SGN-E266187" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>542</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E266187" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67594" e_stop="67495"/>
          <exon e_start="67326" e_stop="67222"/>
          <exon e_start="67111" e_stop="67019"/>
          <exon e_start="66481" e_stop="66393"/>
          <exon e_start="62576" e_stop="62422"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGGCTGCAATAAGAAGCAGCGGTGGTAACAAGACATCTTTTGCCGAGGGTATAGAGCCATCTATAATATATGTACGATTCAAGGCTGCAGCAAATGAGGTAATATTGGAACATCTCCTTGCCTTTTAGTTAGTAGAATAGAAACTCTATTAATTCGTTGTATGGCAGTGAGTATTTCTAATCTCAAAAAAAAAAAAAAAAAGAGAAAGAAACTAGGACTAGCTTTTACGTGTAATCCATGAACCAAATGAACCTAGTTACCTGCAGCTTAAGCCTATCCTGGAGGAAATTGAAAGCAGAACACCTAGAAAAGAGTATATTCAACTTCTTGAAGAATGCCACAAACTCTATTGCGAACAGCGCCTTTCCTTGGTAAGTAGTAAGCTGCTCCTTTCAGTTCTATATATATAATTAAATATATGGTTTTTTTCTTCTCCTTCTTTCATCGTTAATCAATACTCGTTCTGTTTCATTTAATTCAGATAAGAGGTATAGTGCAACAGCGGATCTCTGAATTTTCTAGGAAAGAAGCATTGTCGTCTTTAACTAGATCTGGATGTGCATATTTAATGCAGGTACATTCAATGACATCAGTAATATTTACAACATTTTGTACTAGAGCATGGTATGATTGTTATATCTTGCCTTACAAAAATTGGATGACTGTTCTTTTTGTGGTGTTTGGTGGGGGTATAAGAAGAAGATGAAAAGAGACAATTCGAGGTTGACCTACCAGTTTTGATAGTCATATGAGCAATCGACATCATTTTTCTTTTATTTGACAGGATTAATTCAAAGTAATTAGTTCTCATTCTCAAAAAAATCAAAGTAATTTGTTGTAAATAAGAGAGCCACTCCTTATTTTTTCTTTCAACAGTTAGCTCATGTTAGTGTAGATGAATATTTCCTCTAATTGGATTTAGGATAAATGTGCTAAAACTATAACAGCCTTGATTTCTTTGAGGGTGGAATCATAACTTCTATATATTTTTCTATGAATCACTATTGTCAAAGTAAATATCTGATGTTGCTTCAGACAGTTTTTCTAAAGGTATATATGGGTAAACTGTGATATATGTCTCCATACCTTACGTTTGACATCGTAAATGCAGGTGTGTCAGCTGGAGCATCAACTCTTCAATCACTTCTTTCCATCATCTTCAGAGGACATTTCGAGTTTGACTCCTCTTGTAGATCCTCTGTGAGTTGCTTAACTTCTCTTGTGGGGTTCCTTCTGCATTTGAACAATTTTTGCTTCTTACTGATTTCCTTTCCCACTTCTTCTTTTCTAGTTTGCTTCTTTTTTCCTTTTCTTGTCTTGGTTTGTTTGGGGGTGGGGGAGGTTTGGATTATCTGTATTGTTTTTCACGCGACTTGTAAACAAGAGAGCCGCAACATAGCAAAATTTTTGTGCCAGTAAGACTTTGCTATTTTGGTAGCTTGTGCCATGCTTAAACCTTCTTAGGCCAGAGTTGCTATCAGCGGTAAGTGTGTGTAAACATTTTCAGACATTATTTGTGTGCTAATAAAAATCAGTGTGGACCATGAGGCTGCCCAATAGCTTAGTGATTGTCACTTTAGATCTTAGGGCTAGCACAAGATAAGTTCCTGGTTTGGAATTTGAAGCAGTCCTGAGGGATGTACAGCTATCTATTCCTCTGAAAGAGCTGCTCAGATTTCCCTCTGGTTTAGATTTGCAGGTTGCTCTGGCCATCAGTTATGAATATGTGCTATGTTTATATATCAAGTTAGTCTGGTCATCATTTGCTTCTGCTTCAACTGCTTTTATGACCTTAAATCTTTGGCTTTGAGATACAAATGTGGAGGTTAAATGTGAAAGTTATAGTAAATTCAAGCGAACCTGGTATTTCAAGTATATGCGTTCACTTATTCTCCAAAACATAAGTATAAGCTTTAACTCAAAAGGTGGTTAAACAACTACTTTTTGATAAAGAAGGTAGCAGAGAAATTATTTAAGTGAAGATTAAAGGGTTGGCTCATCACCTATTAAGAGTTTCAAAATGTGTGTTTGTTGCCCTTAATATTTGTCGGTTAGGTAAAAAAGCATCTTCTACGTCCAAAAAAGTAAAATCATGAAGTCTGGTAAAGCCTCATTTGTCTTCACTAAGCTGAGGATGTTCGGATTAAGTACACATCTAAATATTAAGATTTAGATATCTGAATCTGAATGCACATGAATATTTAAGATGTATTAAAAACTATATACTAAATGTTTAGGACGGTTTGATTTTCAAAAATTGAACATATTAATGTTTTTATTTATAAATTAATAAATATGAAGTTAAAAAACAAAATACTATATTTATCTCCTATTGTATCTTTAAAAAATTATATGGTGTTGGAGGTGGTGATTTCTCGTGGTGGTGGTTGTGAGTAGTAGCTAGTTGTGATGGTCGGTAGTTAGTAGTGGCGGCTAATAGTTTTGTAGTGGATAATAGTAATAGTTATTGGTGGTGATGAATGATAATGGTGGTTTGACTATACATAGCGGTGATTGTCAGTAGTGATTAATATTTGTTGTGGTAATGGTTGTTGGTGCTGGCAATTGTAAATGTGCTGTCAATAACCAACCCAAACCTAATTGGTTTGGATTTAATTTTGCCACCCCTATTCAAACCCATTTAATTTTTCTTTCTTATTAAATAACATATAAAATCAAAGAAAAAAAATTAAAAATATTTTAACAAAATTTCTCAAAAATCATTTTGTTTTACATATCAACTCAATTTTTAATGGGTTGAAATGGTTTGGGTTGAGCAAACAAATGGGCGGTCAATAACCAACCCAAACTTAAATGGGTTGGGTTTAATTTTTCCACCCTATTCAAACCCATTTAGTGCTTGTAACATGAAAAAAAAATGTACTTAATGATTGACATTTGAATGATTCAGATCTAAAAACCAAACGGACTTAATGACTGACAAATGAATGGTTAAGATTAAGACTATTATTAAATGCAAACAGATGAGGCCTAAGGAAACCTAATTGTTGTCAGTTACTACGTGTGATGTGTTTCTTTGTGATATGCTGACTTCTCTTACTATCTGGGGCTTCCAGTCACTCGGAGCGCAAAGCGGTAAAAACTGACACGGTCCCGCTTCAAGCTTTAAGTGAAGTGCTTGCTTCATTGAAGTGAAATCAAAAGAAAAAAGACCAAAATAAATAGAGACAAAATATATAAGAAAAAATTCATATTAAAACCAAATAAAGGCCCCCTTTATTTCCTTGTCACAAAACAGACATACTATTCTTATCCTATTGGTATCACCAACTTTTTTCCCATATTTTCATCCCGGGCTAGCCATTTTACATCACGGATAAGATTTGAGAAAAATAATCAACACCTATATTTTTATCATTATAAAAGAAAAAATTCAACATTTTAGTCATTGTTAAGAAACAAAACAATTCAGCAATATATATTTGATCACTGTGAGGGAAAAAATTTCGGCAACATATAATTTAAATAATCAAAGCTATACATGACAAAGGAAAGCAGAGTAACGAAAAGAGTAGCAAAAAAGAAGAAAGTCCTAGCTAGCAGTGCCACTGCACCAAAATGAAGAAGAAAGAAGAGAAAACGAAGAAAGAAAAGAGAAAAAGTACTGGAAGGAAAAAGTACACAGAAACTTTACTATTCTAATTTCTTAAGGATTAGGTAAGTCATACCTCTTTTTATTATTTAAAGGTGACCACTTCCTAATTTTTTAAAAAAAACCGCTGCTTTTCTCGCTTCACCGCTTCTGGTCGCATCGCGCTTCAAGCCCAGAAGCAGCCGCTTCTTTCACATGCCTCGCTTCAGCTGGCTGAAGTGCTGAACTCTCGCTTCGCTTCACTGCTTAAAGCGATGAAGCACTTGCTTTCCTGAACACTGCCCCCATGGGTGATATATGAAATGAGATGTCCATTATACCTATACCTTTCTTTTGGTTCATAAGTTCTCTTTTTTCCTTCTCTGGTATTTTAATGTACATGTATGTCCTTCCTGATTGTGGGGCAGAGAGATAGAAAGCCTTGCACTTTTATCCATCAAAATTTGACCTCGAATATAAGCTGTACCATATTTATAGTTTTTCTTGTCAAGTTAATGTGATTAGATAATATCAATGGAGGGAGTTACAGTTACTGATAGTCGAATCTAATGGCAGATTTCAGTGTTAGTAAGTTAATCAGCAGTGAAACATGTACCTTTCATATATGAGAAGGTAATGGAACGTGTTATTTGGTTCACTTGATAACATTACTTTTTATCTTTGCTCCATTCTAGTAATTGGAGATTCGCAATCAGATATTCTCTACCCCCTGCATTCTCAAGCTACATTTCTACTTGCCTCCTTTATTTATAAATATTCTTATTTATGTAGTCCATGATAAGTCATGTTTTTGAGCTTATGTCCTCTGCATAACATGATATGAATATTCTGTGCATAGCATATATATCCATGTGCTCCCACCCCATCTCTCAGTTGGTCCAATTACAAGCAGTTTAATGAAGCGTTGACATGTTATACTCCCTCCATCCCGTTTTAGGTTATGGTGTTTACTGAGCATGGAGTTTAAAAAAGAAAGAAAGAGTTTGAAAATTTTGGTCTATAGTAGGCCCACTTAGTCTACCCTTGAGCTGAGGGTCTTTCGGAAACAACCTTTCTACCTACACAAGGTAGTGGTAAGGTCTGCATTCACTCTACCTTCCCCCGATCCCACTTAGTGGGATTCCATTGGATATGTTGTTGTTGTGATCTATAACAGACCATAGACACTTGTATGACAATAAATAATATCATTAAGGTTAGAAATGCAAGTTTAAAGGAAAAGTTGTCAATTCTTTTTTGGATAGACGAACAAGGAAAATGTGTTGTATAAAAATTGGACAAAGGAAATACTGTCTATATGCCCCTGAAGCTGCTGGAATTTGAGCTTTTTTTTTTTTTTTTAATGATAAGTAGCTTGATCTCTATGTCTCTTAAGGTTACAATTACCTCCCTACAAACTGCAGGTGTACTTTCCTCTATGATACATCGCGTCCTAAACTTATTCACGAAACAAACCTGGATGTTCTTTGTGAACTGGTTAATATCCTCAAAGTTGAAGTTCTAGGAGAACAGCTGAGCAGACGGAGGAAGTCATTGGCTGGGTTACCTCCAACGCTAG</genome_strand>
        <mrna_strand>TCAGGCTGCAATAAGAAGCAGCGGTGGTAACAAGACATCTTTTGCCGAGGGTATAGAGCCATCTATAATATATGTACGATTCAAGGCTGCAGCAAATGAG........................................................................................................................................................................CTTAAGCCTATCCTGGAGGAAATTGAAAGCAGAACACCTAGAAAAGAGTATATTCAACTTCTTGAAGAATGCCACAAACTCTATTGCGAACAGCGCCTTTCCTTG..............................................................................................................ATAAGAGGTATAGTGCAACAGCGGATCTCTGAATTTTCTAGGAAAGAAGCATTGTCGTCTTTAACTAGATCTGGATGTGCATATTTAATGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTCAGCTGGAGCATCAACTCTTCAATCACTTCTTTCCATCATCTTCAGAGGACATTTCGAGTTTGACTCCTCTTGTAGATCCTCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTACTTTCCTCTATGATACATCGCGTCCTAAACTTATTCACGAAACAAACCTGGATGTTCTTTGTGAACTGGTTAATATCCTCAAAGTTGAAGTTCTAGGAGAACAGCTGAGCAGACGGGAGAAGTCATTGGCTGGGTTACCTCCAACGCTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E249802" ref_strand="+" ref_description="SGN-E249802 [cLEF-57-H10]">
      <seq>ttctctctatctgttttttctatgtcctcctgtaaccagtctcgagctctgggaatgattcgctctcatgttctttccgttcttagaagtacttcttctcaggtccaggctgcaatacgaagcagtggtggtagcaaaacatcttttgccgagggtatagagtcatctataatatatgtacgcttcaaggctgcagcaaatgagcttaagcctatcttggaggaaattgaaagtagaacacctagaaaagagtatattcaacttcttgaagaatgccacaaactctattgtgaacagcgcctttccttgataagaggtatagtgcaacagcggatctctgaattttccaggaaagaagcactgtcgtctttaactagatctggatgtgcatatttaatgcaggtgtgtcagctagagcatcaacttttcaatcacttcttcccatcatcttcagaggacatttcgagtttgactcctcttgtagatcctctgtgtactttcctctatgatacattgcgtcctaaacttattcacgaaacaaatctggatgttctttgtgaactggttgatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="-" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="68078" stop="62196"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67778" g_stop="67678" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="102" r_length="102" r_score="0.861"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="67677" i_stop="67597" i_length="81">
            <donor d_prob="0.997" d_score="0.94"/>
            <acceptor a_prob="0.924" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="67596" g_stop="67495" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="103" r_stop="204" r_length="102" r_score="0.931"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="67494" i_stop="67327" i_length="168">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67326" g_stop="67222" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="309" r_length="105" r_score="0.971"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="67221" i_stop="67112" i_length="110">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.990" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67111" g_stop="67019" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="310" r_stop="402" r_length="93" r_score="0.978"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="67018" i_stop="66482" i_length="537">
            <donor d_prob="0.931" d_score="0.98"/>
            <acceptor a_prob="0.906" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="66481" g_stop="66393" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="403" r_stop="491" r_length="89" r_score="0.966"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="66392" i_stop="62577" i_length="3816">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.836" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="62576" g_stop="62496" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="492" r_stop="572" r_length="81" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="-" ref_id="SGN-E249802" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>571</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E249802" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67778" e_stop="67678"/>
          <exon e_start="67596" e_stop="67495"/>
          <exon e_start="67326" e_stop="67222"/>
          <exon e_start="67111" e_stop="67019"/>
          <exon e_start="66481" e_stop="66393"/>
          <exon e_start="62576" e_stop="62496"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTCTCTGTCTGTGTTACCTTGGCCCCCTTGTAA-CAGTCTCGAGCTCTGGGAATGATTCGCACTCACGTTCTTTCCGTTCTTAGAAGCACTTCTTCTCAGGTAAATCTGTCTTATGCACTACAATCTTTTCTTGCAGATGAATGGTTGCATATTCTGAGATAAATACACCCATTTTATCAGGTTCAGGCTGCAATAAGAAGCAGCGGTGGTAACAAGACATCTTTTGCCGAGGGTATAGAGCCATCTATAATATATGTACGATTCAAGGCTGCAGCAAATGAGGTAATATTGGAACATCTCCTTGCCTTTTAGTTAGTAGAATAGAAACTCTATTAATTCGTTGTATGGCAGTGAGTATTTCTAATCTCAAAAAAAAAAAAAAAAAGAGAAAGAAACTAGGACTAGCTTTTACGTGTAATCCATGAACCAAATGAACCTAGTTACCTGCAGCTTAAGCCTATCCTGGAGGAAATTGAAAGCAGAACACCTAGAAAAGAGTATATTCAACTTCTTGAAGAATGCCACAAACTCTATTGCGAACAGCGCCTTTCCTTGGTAAGTAGTAAGCTGCTCCTTTCAGTTCTATATATATAATTAAATATATGGTTTTTTTCTTCTCCTTCTTTCATCGTTAATCAATACTCGTTCTGTTTCATTTAATTCAGATAAGAGGTATAGTGCAACAGCGGATCTCTGAATTTTCTAGGAAAGAAGCATTGTCGTCTTTAACTAGATCTGGATGTGCATATTTAATGCAGGTACATTCAATGACATCAGTAATATTTACAACATTTTGTACTAGAGCATGGTATGATTGTTATATCTTGCCTTACAAAAATTGGATGACTGTTCTTTTTGTGGTGTTTGGTGGGGGTATAAGAAGAAGATGAAAAGAGACAATTCGAGGTTGACCTACCAGTTTTGATAGTCATATGAGCAATCGACATCATTTTTCTTTTATTTGACAGGATTAATTCAAAGTAATTAGTTCTCATTCTCAAAAAAATCAAAGTAATTTGTTGTAAATAAGAGAGCCACTCCTTATTTTTTCTTTCAACAGTTAGCTCATGTTAGTGTAGATGAATATTTCCTCTAATTGGATTTAGGATAAATGTGCTAAAACTATAACAGCCTTGATTTCTTTGAGGGTGGAATCATAACTTCTATATATTTTTCTATGAATCACTATTGTCAAAGTAAATATCTGATGTTGCTTCAGACAGTTTTTCTAAAGGTATATATGGGTAAACTGTGATATATGTCTCCATACCTTACGTTTGACATCGTAAATGCAGGTGTGTCAGCTGGAGCATCAACTCTTCAATCACTTCTTTCCATCATCTTCAGAGGACATTTCGAGTTTGACTCCTCTTGTAGATCCTCTGTGAGTTGCTTAACTTCTCTTGTGGGGTTCCTTCTGCATTTGAACAATTTTTGCTTCTTACTGATTTCCTTTCCCACTTCTTCTTTTCTAGTTTGCTTCTTTTTTCCTTTTCTTGTCTTGGTTTGTTTGGGGGTGGGGGAGGTTTGGATTATCTGTATTGTTTTTCACGCGACTTGTAAACAAGAGAGCCGCAACATAGCAAAATTTTTGTGCCAGTAAGACTTTGCTATTTTGGTAGCTTGTGCCATGCTTAAACCTTCTTAGGCCAGAGTTGCTATCAGCGGTAAGTGTGTGTAAACATTTTCAGACATTATTTGTGTGCTAATAAAAATCAGTGTGGACCATGAGGCTGCCCAATAGCTTAGTGATTGTCACTTTAGATCTTAGGGCTAGCACAAGATAAGTTCCTGGTTTGGAATTTGAAGCAGTCCTGAGGGATGTACAGCTATCTATTCCTCTGAAAGAGCTGCTCAGATTTCCCTCTGGTTTAGATTTGCAGGTTGCTCTGGCCATCAGTTATGAATATGTGCTATGTTTATATATCAAGTTAGTCTGGTCATCATTTGCTTCTGCTTCAACTGCTTTTATGACCTTAAATCTTTGGCTTTGAGATACAAATGTGGAGGTTAAATGTGAAAGTTATAGTAAATTCAAGCGAACCTGGTATTTCAAGTATATGCGTTCACTTATTCTCCAAAACATAAGTATAAGCTTTAACTCAAAAGGTGGTTAAACAACTACTTTTTGATAAAGAAGGTAGCAGAGAAATTATTTAAGTGAAGATTAAAGGGTTGGCTCATCACCTATTAAGAGTTTCAAAATGTGTGTTTGTTGCCCTTAATATTTGTCGGTTAGGTAAAAAAGCATCTTCTACGTCCAAAAAAGTAAAATCATGAAGTCTGGTAAAGCCTCATTTGTCTTCACTAAGCTGAGGATGTTCGGATTAAGTACACATCTAAATATTAAGATTTAGATATCTGAATCTGAATGCACATGAATATTTAAGATGTATTAAAAACTATATACTAAATGTTTAGGACGGTTTGATTTTCAAAAATTGAACATATTAATGTTTTTATTTATAAATTAATAAATATGAAGTTAAAAAACAAAATACTATATTTATCTCCTATTGTATCTTTAAAAAATTATATGGTGTTGGAGGTGGTGATTTCTCGTGGTGGTGGTTGTGAGTAGTAGCTAGTTGTGATGGTCGGTAGTTAGTAGTGGCGGCTAATAGTTTTGTAGTGGATAATAGTAATAGTTATTGGTGGTGATGAATGATAATGGTGGTTTGACTATACATAGCGGTGATTGTCAGTAGTGATTAATATTTGTTGTGGTAATGGTTGTTGGTGCTGGCAATTGTAAATGTGCTGTCAATAACCAACCCAAACCTAATTGGTTTGGATTTAATTTTGCCACCCCTATTCAAACCCATTTAATTTTTCTTTCTTATTAAATAACATATAAAATCAAAGAAAAAAAATTAAAAATATTTTAACAAAATTTCTCAAAAATCATTTTGTTTTACATATCAACTCAATTTTTAATGGGTTGAAATGGTTTGGGTTGAGCAAACAAATGGGCGGTCAATAACCAACCCAAACTTAAATGGGTTGGGTTTAATTTTTCCACCCTATTCAAACCCATTTAGTGCTTGTAACATGAAAAAAAAATGTACTTAATGATTGACATTTGAATGATTCAGATCTAAAAACCAAACGGACTTAATGACTGACAAATGAATGGTTAAGATTAAGACTATTATTAAATGCAAACAGATGAGGCCTAAGGAAACCTAATTGTTGTCAGTTACTACGTGTGATGTGTTTCTTTGTGATATGCTGACTTCTCTTACTATCTGGGGCTTCCAGTCACTCGGAGCGCAAAGCGGTAAAAACTGACACGGTCCCGCTTCAAGCTTTAAGTGAAGTGCTTGCTTCATTGAAGTGAAATCAAAAGAAAAAAGACCAAAATAAATAGAGACAAAATATATAAGAAAAAATTCATATTAAAACCAAATAAAGGCCCCCTTTATTTCCTTGTCACAAAACAGACATACTATTCTTATCCTATTGGTATCACCAACTTTTTTCCCATATTTTCATCCCGGGCTAGCCATTTTACATCACGGATAAGATTTGAGAAAAATAATCAACACCTATATTTTTATCATTATAAAAGAAAAAATTCAACATTTTAGTCATTGTTAAGAAACAAAACAATTCAGCAATATATATTTGATCACTGTGAGGGAAAAAATTTCGGCAACATATAATTTAAATAATCAAAGCTATACATGACAAAGGAAAGCAGAGTAACGAAAAGAGTAGCAAAAAAGAAGAAAGTCCTAGCTAGCAGTGCCACTGCACCAAAATGAAGAAGAAAGAAGAGAAAACGAAGAAAGAAAAGAGAAAAAGTACTGGAAGGAAAAAGTACACAGAAACTTTACTATTCTAATTTCTTAAGGATTAGGTAAGTCATACCTCTTTTTATTATTTAAAGGTGACCACTTCCTAATTTTTTAAAAAAAACCGCTGCTTTTCTCGCTTCACCGCTTCTGGTCGCATCGCGCTTCAAGCCCAGAAGCAGCCGCTTCTTTCACATGCCTCGCTTCAGCTGGCTGAAGTGCTGAACTCTCGCTTCGCTTCACTGCTTAAAGCGATGAAGCACTTGCTTTCCTGAACACTGCCCCCATGGGTGATATATGAAATGAGATGTCCATTATACCTATACCTTTCTTTTGGTTCATAAGTTCTCTTTTTTCCTTCTCTGGTATTTTAATGTACATGTATGTCCTTCCTGATTGTGGGGCAGAGAGATAGAAAGCCTTGCACTTTTATCCATCAAAATTTGACCTCGAATATAAGCTGTACCATATTTATAGTTTTTCTTGTCAAGTTAATGTGATTAGATAATATCAATGGAGGGAGTTACAGTTACTGATAGTCGAATCTAATGGCAGATTTCAGTGTTAGTAAGTTAATCAGCAGTGAAACATGTACCTTTCATATATGAGAAGGTAATGGAACGTGTTATTTGGTTCACTTGATAACATTACTTTTTATCTTTGCTCCATTCTAGTAATTGGAGATTCGCAATCAGATATTCTCTACCCCCTGCATTCTCAAGCTACATTTCTACTTGCCTCCTTTATTTATAAATATTCTTATTTATGTAGTCCATGATAAGTCATGTTTTTGAGCTTATGTCCTCTGCATAACATGATATGAATATTCTGTGCATAGCATATATATCCATGTGCTCCCACCCCATCTCTCAGTTGGTCCAATTACAAGCAGTTTAATGAAGCGTTGACATGTTATACTCCCTCCATCCCGTTTTAGGTTATGGTGTTTACTGAGCATGGAGTTTAAAAAAGAAAGAAAGAGTTTGAAAATTTTGGTCTATAGTAGGCCCACTTAGTCTACCCTTGAGCTGAGGGTCTTTCGGAAACAACCTTTCTACCTACACAAGGTAGTGGTAAGGTCTGCATTCACTCTACCTTCCCCCGATCCCACTTAGTGGGATTCCATTGGATATGTTGTTGTTGTGATCTATAACAGACCATAGACACTTGTATGACAATAAATAATATCATTAAGGTTAGAAATGCAAGTTTAAAGGAAAAGTTGTCAATTCTTTTTTGGATAGACGAACAAGGAAAATGTGTTGTATAAAAATTGGACAAAGGAAATACTGTCTATATGCCCCTGAAGCTGCTGGAATTTGAGCTTTTTTTTTTTTTTTTAATGATAAGTAGCTTGATCTCTATGTCTCTTAAGGTTACAATTACCTCCCTACAAACTGCAGGTGTACTTTCCTCTATGATACATCGCGTCCTAAACTTATTCACGAAACAAACCTGGATGTTCTTTGTGAACTGGTTAATAT</genome_strand>
        <mrna_strand>TTCTCTCTATCTGTTTTTTCTATGTCCTCCTGTAACCAGTCTCGAGCTCTGGGAATGATTCGCTCTCATGTTCTTTCCGTTCTTAGAAGTACTTCTTCTCAG.................................................................................GTCCAGGCTGCAATACGAAGCAGTGGTGGTAGCAAAACATCTTTTGCCGAGGGTATAGAGTCATCTATAATATATGTACGCTTCAAGGCTGCAGCAAATGAG........................................................................................................................................................................CTTAAGCCTATCTTGGAGGAAATTGAAAGTAGAACACCTAGAAAAGAGTATATTCAACTTCTTGAAGAATGCCACAAACTCTATTGTGAACAGCGCCTTTCCTTG..............................................................................................................ATAAGAGGTATAGTGCAACAGCGGATCTCTGAATTTTCCAGGAAAGAAGCACTGTCGTCTTTAACTAGATCTGGATGTGCATATTTAATGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTCAGCTAGAGCATCAACTTTTCAATCACTTCTTCCCATCATCTTCAGAGGACATTTCGAGTTTGACTCCTCTTGTAGATCCTCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTACTTTCCTCTATGATACATTGCGTCCTAAACTTATTCACGAAACAAATCTGGATGTTCTTTGTGAACTGGTTGATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E687822" ref_strand="+" ref_description="SGN-E687822 [T3_tus_81_D08]">
      <seq>cgttgcaatgttgtaccatccatgcttttctttggttatttgtgaagtttactatgtggacatgtctagagtcacaggtttcttctagggatatgacttcttttatcaagattaagttctattgagttaagcttgtaaatctatgcataagagcacaaataacctttgtgtttctcctctgcatcactgaagatatgtagagagtagtaacccacaatatgcagagtgcagcatttatttggtcaagtttcgacaacttcagtctcgagctctgggaatgattcgcactcacgttctttccgttcttagaagcacttcttctcaggttcaggctgcaataagaagcagcggtggtaacaagacatcttttgccgagggtatagagccatctataatatatgtacgattcaaggctgcagcaaatgagcttaagcctatcctggaggaaattgaaagcagaacacctagaaaagagtatattcaacttcttgaagaatgccacaaactctattgcgaacagcgcctttccttgataagaggtatagtgcaacagcggatctctgaattttctaggaaagaagcattgtcgtctttaactagatctggatgtgcatatttaatgcaggtgtgtcagctggagcatcaactcttcaatcacttctttccatcatcttcagaggacatttcgagtttgactcctcttgtagatcctctgtgtactttcctctatgatacatccgcgtctaaacttatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="-" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="68464" stop="62237"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68167" g_stop="67906" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="262" r_length="262" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="67905" i_stop="67741" i_length="165">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.630" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="67740" g_stop="67678" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="263" r_stop="325" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="67677" i_stop="67597" i_length="81">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67596" g_stop="67495" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="427" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="67494" i_stop="67327" i_length="168">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67326" g_stop="67222" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="428" r_stop="532" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="67221" i_stop="67112" i_length="110">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="67111" g_stop="67019" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="533" r_stop="625" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="67018" i_stop="66482" i_length="537">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.906" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="66481" g_stop="66393" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="626" r_stop="714" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="66392" i_stop="62577" i_length="3816">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.836" a_score="0.93"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="62576" g_stop="62537" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="715" r_stop="754" r_length="40" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="-" ref_id="SGN-E687822" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>754</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E687822" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68167" e_stop="67906"/>
          <exon e_start="67740" e_stop="67678"/>
          <exon e_start="67596" e_stop="67495"/>
          <exon e_start="67326" e_stop="67222"/>
          <exon e_start="67111" e_stop="67019"/>
          <exon e_start="66481" e_stop="66393"/>
          <exon e_start="62576" e_stop="62537"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTGCAATGTTGTACCATCCATGCTTTTCTTTGGTTATTTGTGAAGTTTACTATGTGGACATGTCTAGAGTCACAGGTTTCTTCTAGGGATATGACTTCTTTTATCAAGATTAAGTTCTATTGAGTTAAGCTTGTAAATCTATGCATAAGAGCACAAATAACCTTTGTGTTTCTCCTCTGCATCACTGAAGATATGTAGAGAGTAGTAACCCACAATATGCAGAGTGCAGCATTTATTTGGTCAAGTTTCGACAACTTCAGGTACTTAAAAGAATTGACATCAACATTATGTAATTTACTATCATATATAAAATTGCATTTCTTTATACAAGGCATGATTTTATGGCATTCTTGGACATATGAATTCTAATCCCATTGCCCATTCTCCTTCTCTCTGTCTGTGTTACCTTGGCCCCCTTGTAACAGTCTCGAGCTCTGGGAATGATTCGCACTCACGTTCTTTCCGTTCTTAGAAGCACTTCTTCTCAGGTAAATCTGTCTTATGCACTACAATCTTTTCTTGCAGATGAATGGTTGCATATTCTGAGATAAATACACCCATTTTATCAGGTTCAGGCTGCAATAAGAAGCAGCGGTGGTAACAAGACATCTTTTGCCGAGGGTATAGAGCCATCTATAATATATGTACGATTCAAGGCTGCAGCAAATGAGGTAATATTGGAACATCTCCTTGCCTTTTAGTTAGTAGAATAGAAACTCTATTAATTCGTTGTATGGCAGTGAGTATTTCTAATCTCAAAAAAAAAAAAAAAAAGAGAAAGAAACTAGGACTAGCTTTTACGTGTAATCCATGAACCAAATGAACCTAGTTACCTGCAGCTTAAGCCTATCCTGGAGGAAATTGAAAGCAGAACACCTAGAAAAGAGTATATTCAACTTCTTGAAGAATGCCACAAACTCTATTGCGAACAGCGCCTTTCCTTGGTAAGTAGTAAGCTGCTCCTTTCAGTTCTATATATATAATTAAATATATGGTTTTTTTCTTCTCCTTCTTTCATCGTTAATCAATACTCGTTCTGTTTCATTTAATTCAGATAAGAGGTATAGTGCAACAGCGGATCTCTGAATTTTCTAGGAAAGAAGCATTGTCGTCTTTAACTAGATCTGGATGTGCATATTTAATGCAGGTACATTCAATGACATCAGTAATATTTACAACATTTTGTACTAGAGCATGGTATGATTGTTATATCTTGCCTTACAAAAATTGGATGACTGTTCTTTTTGTGGTGTTTGGTGGGGGTATAAGAAGAAGATGAAAAGAGACAATTCGAGGTTGACCTACCAGTTTTGATAGTCATATGAGCAATCGACATCATTTTTCTTTTATTTGACAGGATTAATTCAAAGTAATTAGTTCTCATTCTCAAAAAAATCAAAGTAATTTGTTGTAAATAAGAGAGCCACTCCTTATTTTTTCTTTCAACAGTTAGCTCATGTTAGTGTAGATGAATATTTCCTCTAATTGGATTTAGGATAAATGTGCTAAAACTATAACAGCCTTGATTTCTTTGAGGGTGGAATCATAACTTCTATATATTTTTCTATGAATCACTATTGTCAAAGTAAATATCTGATGTTGCTTCAGACAGTTTTTCTAAAGGTATATATGGGTAAACTGTGATATATGTCTCCATACCTTACGTTTGACATCGTAAATGCAGGTGTGTCAGCTGGAGCATCAACTCTTCAATCACTTCTTTCCATCATCTTCAGAGGACATTTCGAGTTTGACTCCTCTTGTAGATCCTCTGTGAGTTGCTTAACTTCTCTTGTGGGGTTCCTTCTGCATTTGAACAATTTTTGCTTCTTACTGATTTCCTTTCCCACTTCTTCTTTTCTAGTTTGCTTCTTTTTTCCTTTTCTTGTCTTGGTTTGTTTGGGGGTGGGGGAGGTTTGGATTATCTGTATTGTTTTTCACGCGACTTGTAAACAAGAGAGCCGCAACATAGCAAAATTTTTGTGCCAGTAAGACTTTGCTATTTTGGTAGCTTGTGCCATGCTTAAACCTTCTTAGGCCAGAGTTGCTATCAGCGGTAAGTGTGTGTAAACATTTTCAGACATTATTTGTGTGCTAATAAAAATCAGTGTGGACCATGAGGCTGCCCAATAGCTTAGTGATTGTCACTTTAGATCTTAGGGCTAGCACAAGATAAGTTCCTGGTTTGGAATTTGAAGCAGTCCTGAGGGATGTACAGCTATCTATTCCTCTGAAAGAGCTGCTCAGATTTCCCTCTGGTTTAGATTTGCAGGTTGCTCTGGCCATCAGTTATGAATATGTGCTATGTTTATATATCAAGTTAGTCTGGTCATCATTTGCTTCTGCTTCAACTGCTTTTATGACCTTAAATCTTTGGCTTTGAGATACAAATGTGGAGGTTAAATGTGAAAGTTATAGTAAATTCAAGCGAACCTGGTATTTCAAGTATATGCGTTCACTTATTCTCCAAAACATAAGTATAAGCTTTAACTCAAAAGGTGGTTAAACAACTACTTTTTGATAAAGAAGGTAGCAGAGAAATTATTTAAGTGAAGATTAAAGGGTTGGCTCATCACCTATTAAGAGTTTCAAAATGTGTGTTTGTTGCCCTTAATATTTGTCGGTTAGGTAAAAAAGCATCTTCTACGTCCAAAAAAGTAAAATCATGAAGTCTGGTAAAGCCTCATTTGTCTTCACTAAGCTGAGGATGTTCGGATTAAGTACACATCTAAATATTAAGATTTAGATATCTGAATCTGAATGCACATGAATATTTAAGATGTATTAAAAACTATATACTAAATGTTTAGGACGGTTTGATTTTCAAAAATTGAACATATTAATGTTTTTATTTATAAATTAATAAATATGAAGTTAAAAAACAAAATACTATATTTATCTCCTATTGTATCTTTAAAAAATTATATGGTGTTGGAGGTGGTGATTTCTCGTGGTGGTGGTTGTGAGTAGTAGCTAGTTGTGATGGTCGGTAGTTAGTAGTGGCGGCTAATAGTTTTGTAGTGGATAATAGTAATAGTTATTGGTGGTGATGAATGATAATGGTGGTTTGACTATACATAGCGGTGATTGTCAGTAGTGATTAATATTTGTTGTGGTAATGGTTGTTGGTGCTGGCAATTGTAAATGTGCTGTCAATAACCAACCCAAACCTAATTGGTTTGGATTTAATTTTGCCACCCCTATTCAAACCCATTTAATTTTTCTTTCTTATTAAATAACATATAAAATCAAAGAAAAAAAATTAAAAATATTTTAACAAAATTTCTCAAAAATCATTTTGTTTTACATATCAACTCAATTTTTAATGGGTTGAAATGGTTTGGGTTGAGCAAACAAATGGGCGGTCAATAACCAACCCAAACTTAAATGGGTTGGGTTTAATTTTTCCACCCTATTCAAACCCATTTAGTGCTTGTAACATGAAAAAAAAATGTACTTAATGATTGACATTTGAATGATTCAGATCTAAAAACCAAACGGACTTAATGACTGACAAATGAATGGTTAAGATTAAGACTATTATTAAATGCAAACAGATGAGGCCTAAGGAAACCTAATTGTTGTCAGTTACTACGTGTGATGTGTTTCTTTGTGATATGCTGACTTCTCTTACTATCTGGGGCTTCCAGTCACTCGGAGCGCAAAGCGGTAAAAACTGACACGGTCCCGCTTCAAGCTTTAAGTGAAGTGCTTGCTTCATTGAAGTGAAATCAAAAGAAAAAAGACCAAAATAAATAGAGACAAAATATATAAGAAAAAATTCATATTAAAACCAAATAAAGGCCCCCTTTATTTCCTTGTCACAAAACAGACATACTATTCTTATCCTATTGGTATCACCAACTTTTTTCCCATATTTTCATCCCGGGCTAGCCATTTTACATCACGGATAAGATTTGAGAAAAATAATCAACACCTATATTTTTATCATTATAAAAGAAAAAATTCAACATTTTAGTCATTGTTAAGAAACAAAACAATTCAGCAATATATATTTGATCACTGTGAGGGAAAAAATTTCGGCAACATATAATTTAAATAATCAAAGCTATACATGACAAAGGAAAGCAGAGTAACGAAAAGAGTAGCAAAAAAGAAGAAAGTCCTAGCTAGCAGTGCCACTGCACCAAAATGAAGAAGAAAGAAGAGAAAACGAAGAAAGAAAAGAGAAAAAGTACTGGAAGGAAAAAGTACACAGAAACTTTACTATTCTAATTTCTTAAGGATTAGGTAAGTCATACCTCTTTTTATTATTTAAAGGTGACCACTTCCTAATTTTTTAAAAAAAACCGCTGCTTTTCTCGCTTCACCGCTTCTGGTCGCATCGCGCTTCAAGCCCAGAAGCAGCCGCTTCTTTCACATGCCTCGCTTCAGCTGGCTGAAGTGCTGAACTCTCGCTTCGCTTCACTGCTTAAAGCGATGAAGCACTTGCTTTCCTGAACACTGCCCCCATGGGTGATATATGAAATGAGATGTCCATTATACCTATACCTTTCTTTTGGTTCATAAGTTCTCTTTTTTCCTTCTCTGGTATTTTAATGTACATGTATGTCCTTCCTGATTGTGGGGCAGAGAGATAGAAAGCCTTGCACTTTTATCCATCAAAATTTGACCTCGAATATAAGCTGTACCATATTTATAGTTTTTCTTGTCAAGTTAATGTGATTAGATAATATCAATGGAGGGAGTTACAGTTACTGATAGTCGAATCTAATGGCAGATTTCAGTGTTAGTAAGTTAATCAGCAGTGAAACATGTACCTTTCATATATGAGAAGGTAATGGAACGTGTTATTTGGTTCACTTGATAACATTACTTTTTATCTTTGCTCCATTCTAGTAATTGGAGATTCGCAATCAGATATTCTCTACCCCCTGCATTCTCAAGCTACATTTCTACTTGCCTCCTTTATTTATAAATATTCTTATTTATGTAGTCCATGATAAGTCATGTTTTTGAGCTTATGTCCTCTGCATAACATGATATGAATATTCTGTGCATAGCATATATATCCATGTGCTCCCACCCCATCTCTCAGTTGGTCCAATTACAAGCAGTTTAATGAAGCGTTGACATGTTATACTCCCTCCATCCCGTTTTAGGTTATGGTGTTTACTGAGCATGGAGTTTAAAAAAGAAAGAAAGAGTTTGAAAATTTTGGTCTATAGTAGGCCCACTTAGTCTACCCTTGAGCTGAGGGTCTTTCGGAAACAACCTTTCTACCTACACAAGGTAGTGGTAAGGTCTGCATTCACTCTACCTTCCCCCGATCCCACTTAGTGGGATTCCATTGGATATGTTGTTGTTGTGATCTATAACAGACCATAGACACTTGTATGACAATAAATAATATCATTAAGGTTAGAAATGCAAGTTTAAAGGAAAAGTTGTCAATTCTTTTTTGGATAGACGAACAAGGAAAATGTGTTGTATAAAAATTGGACAAAGGAAATACTGTCTATATGCCCCTGAAGCTGCTGGAATTTGAGCTTTTTTTTTTTTTTTTAATGATAAGTAGCTTGATCTCTATGTCTCTTAAGGTTACAATTACCTCCCTACAAACTGCAGGTGTACTTTCCTCTATGATACAT-CGCGTCCTAAACTTATT</genome_strand>
        <mrna_strand>CGTTGCAATGTTGTACCATCCATGCTTTTCTTTGGTTATTTGTGAAGTTTACTATGTGGACATGTCTAGAGTCACAGGTTTCTTCTAGGGATATGACTTCTTTTATCAAGATTAAGTTCTATTGAGTTAAGCTTGTAAATCTATGCATAAGAGCACAAATAACCTTTGTGTTTCTCCTCTGCATCACTGAAGATATGTAGAGAGTAGTAACCCACAATATGCAGAGTGCAGCATTTATTTGGTCAAGTTTCGACAACTTCAG.....................................................................................................................................................................TCTCGAGCTCTGGGAATGATTCGCACTCACGTTCTTTCCGTTCTTAGAAGCACTTCTTCTCAG.................................................................................GTTCAGGCTGCAATAAGAAGCAGCGGTGGTAACAAGACATCTTTTGCCGAGGGTATAGAGCCATCTATAATATATGTACGATTCAAGGCTGCAGCAAATGAG........................................................................................................................................................................CTTAAGCCTATCCTGGAGGAAATTGAAAGCAGAACACCTAGAAAAGAGTATATTCAACTTCTTGAAGAATGCCACAAACTCTATTGCGAACAGCGCCTTTCCTTG..............................................................................................................ATAAGAGGTATAGTGCAACAGCGGATCTCTGAATTTTCTAGGAAAGAAGCATTGTCGTCTTTAACTAGATCTGGATGTGCATATTTAATGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTCAGCTGGAGCATCAACTCTTCAATCACTTCTTTCCATCATCTTCAGAGGACATTTCGAGTTTGACTCCTCTTGTAGATCCTCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTACTTTCCTCTATGATACATCCGCGT-CTAAACTTATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E327185" ref_strand="+" ref_description="SGN-E327185 [cTOC-18-J10]">
      <seq>tgcaatgttgtaccatccatgcttttctttggttatttgtgaagtttactatgtggacatgtctagagtcacaggtttcttctagggatatgacttcttttatcaagattaagttctattgagttaagcttgtaaatctatgcataagagcacaaataacctttgtgtttctcctctgcatcactgaagatatgtagagagtagtaacccacaatatgcagagtgcagcatttatttggtcaagtttcgacaacttcagtctcgagctctgggaatgattcgcactcacgttctttccgttcttagaagcacttcttctcaggttcaggctgcaataagaagcagcggtggtaacaagacatcttttgccgagggtatagagccatctataatatatgtacgattcaaggctgcagcaaatgagcttaagcctatcctggaggaaattgaaagcagaacacctagaaaagagtatattcaacttcttgaagaatgccacaaactctattgcgaacagcgcctttccttgataagaggtatagtgcaacagcggatctctgaattttctaggaaagaagcattgtcgtctttaactagatctggatgtgcatatttaatgcaggtgtgtcagctggagcatnncactcttcatcacttctttccatcatctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="-" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="68464" stop="66133"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68164" g_stop="67906" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="259" r_length="259" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="67905" i_stop="67741" i_length="165">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.630" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="67740" g_stop="67678" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="322" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="67677" i_stop="67597" i_length="81">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67596" g_stop="67495" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="424" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="67494" i_stop="67327" i_length="168">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67326" g_stop="67222" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="425" r_stop="529" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="67221" i_stop="67112" i_length="110">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="67111" g_stop="67019" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="530" r_stop="622" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="67018" i_stop="66482" i_length="537">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.906" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="66481" g_stop="66433" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="623" r_stop="671" r_length="49" r_score="0.898"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="-" ref_id="SGN-E327185" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>671</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E327185" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68164" e_stop="67906"/>
          <exon e_start="67740" e_stop="67678"/>
          <exon e_start="67596" e_stop="67495"/>
          <exon e_start="67326" e_stop="67222"/>
          <exon e_start="67111" e_stop="67019"/>
          <exon e_start="66481" e_stop="66433"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCAATGTTGTACCATCCATGCTTTTCTTTGGTTATTTGTGAAGTTTACTATGTGGACATGTCTAGAGTCACAGGTTTCTTCTAGGGATATGACTTCTTTTATCAAGATTAAGTTCTATTGAGTTAAGCTTGTAAATCTATGCATAAGAGCACAAATAACCTTTGTGTTTCTCCTCTGCATCACTGAAGATATGTAGAGAGTAGTAACCCACAATATGCAGAGTGCAGCATTTATTTGGTCAAGTTTCGACAACTTCAGGTACTTAAAAGAATTGACATCAACATTATGTAATTTACTATCATATATAAAATTGCATTTCTTTATACAAGGCATGATTTTATGGCATTCTTGGACATATGAATTCTAATCCCATTGCCCATTCTCCTTCTCTCTGTCTGTGTTACCTTGGCCCCCTTGTAACAGTCTCGAGCTCTGGGAATGATTCGCACTCACGTTCTTTCCGTTCTTAGAAGCACTTCTTCTCAGGTAAATCTGTCTTATGCACTACAATCTTTTCTTGCAGATGAATGGTTGCATATTCTGAGATAAATACACCCATTTTATCAGGTTCAGGCTGCAATAAGAAGCAGCGGTGGTAACAAGACATCTTTTGCCGAGGGTATAGAGCCATCTATAATATATGTACGATTCAAGGCTGCAGCAAATGAGGTAATATTGGAACATCTCCTTGCCTTTTAGTTAGTAGAATAGAAACTCTATTAATTCGTTGTATGGCAGTGAGTATTTCTAATCTCAAAAAAAAAAAAAAAAAGAGAAAGAAACTAGGACTAGCTTTTACGTGTAATCCATGAACCAAATGAACCTAGTTACCTGCAGCTTAAGCCTATCCTGGAGGAAATTGAAAGCAGAACACCTAGAAAAGAGTATATTCAACTTCTTGAAGAATGCCACAAACTCTATTGCGAACAGCGCCTTTCCTTGGTAAGTAGTAAGCTGCTCCTTTCAGTTCTATATATATAATTAAATATATGGTTTTTTTCTTCTCCTTCTTTCATCGTTAATCAATACTCGTTCTGTTTCATTTAATTCAGATAAGAGGTATAGTGCAACAGCGGATCTCTGAATTTTCTAGGAAAGAAGCATTGTCGTCTTTAACTAGATCTGGATGTGCATATTTAATGCAGGTACATTCAATGACATCAGTAATATTTACAACATTTTGTACTAGAGCATGGTATGATTGTTATATCTTGCCTTACAAAAATTGGATGACTGTTCTTTTTGTGGTGTTTGGTGGGGGTATAAGAAGAAGATGAAAAGAGACAATTCGAGGTTGACCTACCAGTTTTGATAGTCATATGAGCAATCGACATCATTTTTCTTTTATTTGACAGGATTAATTCAAAGTAATTAGTTCTCATTCTCAAAAAAATCAAAGTAATTTGTTGTAAATAAGAGAGCCACTCCTTATTTTTTCTTTCAACAGTTAGCTCATGTTAGTGTAGATGAATATTTCCTCTAATTGGATTTAGGATAAATGTGCTAAAACTATAACAGCCTTGATTTCTTTGAGGGTGGAATCATAACTTCTATATATTTTTCTATGAATCACTATTGTCAAAGTAAATATCTGATGTTGCTTCAGACAGTTTTTCTAAAGGTATATATGGGTAAACTGTGATATATGTCTCCATACCTTACGTTTGACATCGTAAATGCAGGTGTGTCAGCTGGAGCATCA-ACTCTTCAATCACTTCTTTCCATCATCTT</genome_strand>
        <mrna_strand>TGCAATGTTGTACCATCCATGCTTTTCTTTGGTTATTTGTGAAGTTTACTATGTGGACATGTCTAGAGTCACAGGTTTCTTCTAGGGATATGACTTCTTTTATCAAGATTAAGTTCTATTGAGTTAAGCTTGTAAATCTATGCATAAGAGCACAAATAACCTTTGTGTTTCTCCTCTGCATCACTGAAGATATGTAGAGAGTAGTAACCCACAATATGCAGAGTGCAGCATTTATTTGGTCAAGTTTCGACAACTTCAG.....................................................................................................................................................................TCTCGAGCTCTGGGAATGATTCGCACTCACGTTCTTTCCGTTCTTAGAAGCACTTCTTCTCAG.................................................................................GTTCAGGCTGCAATAAGAAGCAGCGGTGGTAACAAGACATCTTTTGCCGAGGGTATAGAGCCATCTATAATATATGTACGATTCAAGGCTGCAGCAAATGAG........................................................................................................................................................................CTTAAGCCTATCCTGGAGGAAATTGAAAGCAGAACACCTAGAAAAGAGTATATTCAACTTCTTGAAGAATGCCACAAACTCTATTGCGAACAGCGCCTTTCCTTG..............................................................................................................ATAAGAGGTATAGTGCAACAGCGGATCTCTGAATTTTCTAGGAAAGAAGCATTGTCGTCTTTAACTAGATCTGGATGTGCATATTTAATGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTCAGCTGGAGCATNNCACTCTTC-ATCACTTCTTTCCATCATCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E454663" ref_strand="+" ref_description="SGN-E454663 [cSTS-24-C7]">
      <seq>cgacggcgacggcgacggcgacaaggcctggtgttccaaagtcggcagctatttccaaaggctataatttcgcttctacttgggaacagaatgctccgttaacagagcaacagcaagcagccatactagcactttcccatgcagttgctgaaaggcctttcccgtccaatttggatcaagtttctggacacaataacagtctctctgtgtcaacaaagctcagttctatggaggattcaggggccattgaagcagtccttgtgaatacaaatcagttttacaagtggtttgcggatcttgaagcagccatgaaatcagagactgaagaaaaatatcagcattatgtcaacaccttaacagagcagattcagacctgcgatagtatacttcaccaggtggatgaaacacttgacttattcaatgagctgcagttgcagcaccaagcagtggcaacaaagactagaacccttcatgatgcgtgtgatagactgcttttggagaagcagaaattaattgagtttgcagaatcacttcacaataagctcaattactttgatgaattggagaatgttgcgaccactttttattctcctagcatgagcgttggtagtacaaattttcttccattgcttaaaagacttgatgagtgcatatcatatgttgagagtaatccacaatatgcagagtgcagcatttatttggtcaagtttcgacaacttcagtctcgagctctgggaatgattcgctctcatgttctttctgttctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="-" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="77615" stop="67396"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77321" g_stop="77233" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="89" r_length="89" r_score="0.809"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="77232" i_stop="72103" i_length="5130">
            <donor d_prob="0.996" d_score="0.94"/>
            <acceptor a_prob="0.986" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72102" g_stop="72019" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="90" r_stop="173" r_length="84" r_score="0.905"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72018" i_stop="71935" i_length="84">
            <donor d_prob="0.992" d_score="0.92"/>
            <acceptor a_prob="0.997" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71934" g_stop="71833" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="275" r_length="102" r_score="0.912"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="71832" i_stop="70227" i_length="1606">
            <donor d_prob="0.980" d_score="0.94"/>
            <acceptor a_prob="0.997" a_score="0.93"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="70226" g_stop="70182" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="276" r_stop="320" r_length="45" r_score="0.933"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="70181" i_stop="70065" i_length="117">
            <donor d_prob="0.959" d_score="0.93"/>
            <acceptor a_prob="0.847" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="70064" g_stop="69990" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="395" r_length="75" r_score="0.960"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="69989" i_stop="69872" i_length="118">
            <donor d_prob="0.914" d_score="0.96"/>
            <acceptor a_prob="0.917" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="69871" g_stop="69776" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="396" r_stop="491" r_length="96" r_score="0.927"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="69775" i_stop="69248" i_length="528">
            <donor d_prob="0.832" d_score="0.94"/>
            <acceptor a_prob="0.926" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="69247" g_stop="69170" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="492" r_stop="569" r_length="78" r_score="0.987"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="69169" i_stop="68307" i_length="863">
            <donor d_prob="0.920" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="68306" g_stop="68215" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="570" r_stop="661" r_length="92" r_score="0.946"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="68214" i_stop="67968" i_length="247">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="67967" g_stop="67906" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="662" r_stop="722" r_length="61" r_score="0.952"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="67905" i_stop="67741" i_length="165">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.630" a_score="0.93"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="67740" g_stop="67696" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="723" r_stop="767" r_length="45" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="-" ref_id="SGN-E454663" ref_strand="+">
        <total_alignment_score>0.922</total_alignment_score>
        <cumulative_length_of_scored_exons>768</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E454663" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77321" e_stop="77233"/>
          <exon e_start="72102" e_stop="72019"/>
          <exon e_start="71934" e_stop="71833"/>
          <exon e_start="70226" e_stop="70182"/>
          <exon e_start="70064" e_stop="69990"/>
          <exon e_start="69871" e_stop="69776"/>
          <exon e_start="69247" e_stop="69170"/>
          <exon e_start="68306" e_stop="68215"/>
          <exon e_start="67967" e_stop="67906"/>
          <exon e_start="67740" e_stop="67696"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAATACTATGGCGGCAACGACAAGGCCGGGGGTTCTCAAGTCCGAAGCTGTTTCCAAAGGCTATAATTTCGCTTCTACTTGGGAACAGGTTCACTCTCTATTTTCTACATTGTTCAGATTTTCTCCAGATTTACTAGATTTGTTTGAACGCATAACCAAAATTATGTAGATATCTGATTCTATGACAAATTTTGATGACCGGATTTTTATCATATGCACTGATCCTGTTGAAATAATGAATAGTAAAGCGGTGATTGGAAAAGGGGATCAAATTACATTGGATTATTGCTTGATTTCTTGGATTCCTTACAGCTTAAGAAAATCCAGCAAATCTTTTAACTATATCTTAGTAATATCTTGGTACTAAGTTTCTCTAATAAATTTTATCACTTACCCAAAAAAGGTGAAAAAAAGGAGGATCAGAATTGTTTCTTTGTGCGATAAAGTTCTCAGTTGATTTTAACATGTGTTTGTCGTCTCATTTCAACGGCAAGGTTTAGCTGCTGGTGATTGTGTCGCATATTCTCCGTTGAACTATCTTTTGAAGTTTTATTTTCATTGTAATGTGACACTGCTTCTCTTTTTCCTCGTATAACCACCGGCTAACTAGCTGCTGAAACTTTTACTTTTAGCTTATTCTTGCAATAGCTATTGGAAAATCACCTTTGAGAGAAATAATGGAGAAAATATTATTGAATTGCTCATCTAAATTGTTACATGAAGACCCTATTTATAGACACTACATTGGAAATCTTTTCTAACTAGAATTCCTATTCTAAGTAAGAAATACTTATTTCTATTCTAACACTCCCCCTCAAGCTGGTGCATACAAATTATATGCACCTAGCTTGTTACAGATGTAATTAATACGAGGACATGTGAGAGACTTAGTGAACATATCCGCAAGCTGATCATTTGACTTCACAAATTTTGTAACAATATCTCCTGAGAGTATCTTTTCTCTGAGAAAGTGACAGTCAATCTCAATGTGCTTAGTCCTTTCATGAAACACTGGATTTGATGCGATATGAAGAGCCGCTTGATTATCACACAAAAGTTCCATCTGATCAATTTTGCCGAATTTTAGTTCTCCCAGTAATTATTTGTGCCAAACTAACTCACAAGTTGCTGTCGCTATTGCTCGATATTCTGATTCTGCACTAGATTGAGAAGCCACATTTTGTTTCTTACTCTTCCACGACACCAAATTACCTCCAACTAAAACACAATATCCGGATGTCAAACGTCTGTTAGAGGGTAATCCTGCCCAATCAGTGTCTGTATATCCAATAATATGCTCATGACCTTGATCCTCAAAGAGTAGTCCTTTGCCGGGGGCTGACTTTATATATCGAAGAATATGAACAACTGCTTCCCAATGACTATCACAAGGGGAAGTCATAAACTGACTTACAACACTCACGGGAAAAGAGATGCCTGGTCTAGTCACTATGAGATAATTCAACTTTCCAACAAGTCGTCTATACCTTTAAGGATTACTAAGTGGCTCCACCTGTCTCGGAAGAAGTTTAACATTCGGATCCATCGGAGTGTCAATAGGTGTACATCCCATCATTCCTGTCTCCTCAAGAATGTCTAAGGCATACTTGTGTTTAGAGATAACAATGCCTGATCTAGATTGAGCAACCTCAATACCTAGAAAATACTTCAATCTACCAAGGTCTTTTGTCTGAAAGTGCTTAAAAAGATGTTGCTTTATATCGGTGATATAGTCTTGATCATTATCAGTGGTAACAATATCATCAACATAAACAACCAAATAGATACATCGACCTGGTGCAGAATGTCGATAAAACACAAAGTGATTTGATCCATTACGAGTCATGCCAAACTTCTGAATTACTGTGCTAAACTTCCCAAACCAAGCTCGAGGAGACTGTTTCAGACCATAGAGTGACCTACGCAATCGACATACAAGGCTACTAGACTCCCCCTGAGCAACAAAACTAGGTGGTTGCTCCATATAGACTTCTTCCTCAAGATCACTAGCAGAAAAGCATTCTTTATGTCCAACTGATAAAGAGGACAATGACGAACAACAACCATAGATTAGAAAAAGACGAACATATGCTATTTTAGCCACAGGAGCAAAAGTGTCACTATAATCTAGCCCAAATATCTGAGTATACCCTTTGGCGACAAGGAGAACCTTAAGTCGATCAACCTAACCATCTAGACCAATTTTGACTGCATAAACCCAATGACAACCAACAGTAGATTTACATGCAGGAAGGGAGACAAGCTCCCAAGTATCACTCTTATGTAAAGCAGACATCTCATCAACCATAGCCTGCCTCCATCTAGAATGAGAAAGTGCTTCACCTATAGTCTTAGGAATGGAAATAGAGGACAATGACGACACAAAGGCATAATGGGTGATGATATATGATGATAACTTAAGAAGGTAAATGCGGGTTAGTATTTCGAGTAGATTGTATACCTTTTTGAAGTGCAAGCGGTGGGCTAGGTAGAGGCAAGTCCGCAGTAGGAGCAGGGTCTGGCGCATGACATGAATCATCTGGGACTAGGGTTGGATGTGGACGACGATGATAAGTTAGTAGTGGTGGCACTGCAACTGGAGATGTAGACGTAACTGTAGATCCCTCAAAGGTTGGCACAGGTAAAATTTGAGGTATGGGTAAGACCATAGAGACATCACTACGATCAGAAGATGTATAATAAGGCTGAGACTCAAAAAATGTAACATCAACAGACATAAGGTATCGGTGAAGAACATGTGAATAACAACGATATCCTTTTTGAACTCTAGAGTAACCAAGAAAGACACATTTGAGGCACGAGGAGCTAATTTATCTTTTCCTGGGGCTAAATTATGAAGAAAGCATGTACTCCAAACGACACGAGAGGGGATAGGATAAAGATGTGACTGAGGAAACAATATGGAATATGGAACATGATTTTGAATATAAGAAGAGGGCATTCTGTTAATTTAATAATAAGCAGAAAGGACTGCATCGCCCCAAAAATGCATCGAAACATGGCAATTCTATGAGGAGAGTGCGAGCAGTCTCTATGAGATATGCCTATTCTTTCTTTCTGCGACACCATTTTGTTGAGGAGTGTATGGACAAGATGTTTGGTGAATGATTCCGTGGTGAGACATAAATTCCTGAAATTGGGGTGATAAGTATACTAAGGCATTATCACTACGGAATGTACGAATAGAAACACCAAACTGATTTTGTATTTCAGCAAAGAAAACTTTGAAAATAGAAAATAACTCAGAACGATCTTTCATTAAGAAAACCCAAGTGCATCTCGAATAATCATCAATGAAACTAACAAAATAACGAAATCCTAAGGGGGAACTGACTCTACTAGTACCCCAAATATTAGAATGAACTAATGAAAAAATAGACTCTGAACGACCCTCAGTACTACGAGAAAATGTAGCACGAGTGTGTTTCCCAAATTGACACGACTCACAATCTAATGTGGATAAACCAGACAAACTAGGTACCATCTTTTTCAATTTGGATAGACTTGAGTGTCCCAAACGTTTGTGAATTAGATCTGAGGAATCTGTAACGGAGCATGCTATTAAAGAATTAGAAGAGGTAAGATAGTAAAGGCCTTGTGATTCATATCTTGTTCCAATAGTCTGTCCTGTACTGCGGTCCTGCATGACAAAGAAATGATCAAAAAAATTATGCTACAATGTAGGGCTTTCGTCAAACGACTAACCGATGCTAGATTAAAAGGAGAACCAGGGACATAAAGAACAGAGTCAAGAGTGACAGAAGATATGGGTTTGGCTTTTCCAACCCCTTTTGGTTTTGTTTGTATCCCATTGGCTAATGTAATAGATGAAAGAGATTATGAATAGATTATATCAGATAAAAGTGATTTATTACCAGTGATATGATCAGAAGCCCCCGATTCTATGACCCATGATCCAATAGTGTTAGACTGTGATATACTAGTACAAAATATTACCCGCAACAGAAACATTAGGTTTTGCAATCGAAACTACTTGTAGAGACGTTTGTTTATTTGCACAATACGGAAAAAACTCTATATATTCCTTTAGAACAACAGGATCATAACTGGGTGATCCACCATGCAAAATAAAACATATGTCACGAGTGTGTCCAGGTTTATGACATGACTACACTTAGATCGAGATTTTTCAAAAAATTCTCTCCCCCGTCTATTCTCCATGGATTTGTATGTACGCTTGGAACTGCCAGAAGCTGCTACACAAGTCTGAAAATATTGGAAGCTGCCGAAATCTGCCCGCAGTGGCCTGAAAAATTCTGATATTGCCGGAATTTTGCTGGGAACTGCCCAAAAAAAATCACCGGAACCCTAATTTCGGTGATCGGATCTAGAGATAACTGTATGGTTCTTACCGAAAACACTGGACGACCCTAACAGAAGAGAGAAACTCGAAAAAAAGAAGAGAGACCCGAGCAGCACTCACGCGCCGGAAGCTGCCCAAAAATCACCGCAACCCTAATTTCGGTGATCGAATCTAAATAAAAATGGTCAAAAACAGTATAGTCTGGGTCGGAATGGCTGGACGACCCCACCTGTCGAAAAAAATCTCAAAGACTATGGACGGAAAAGTCCTCACGCGCCGGCGAGTGAGCCAGATCTCGCCGGAATCTGCCACCTTCGATCGGCGCGTGAGGGCGCGTGCGGTGCTGTTTTCTGGTGGTTCTTGCTGGGGTTTGGTCGCGGGAGGTTTCCTAGCCTCGTGTTGGTGTTGGTTTTCGCACAACACCCACTAAATAAAAAATGATAAAATCAGTCCCAAACGTCACCGGAAATTGAATTGTTTGTTTCTCACCAATGCCCTGATACCATGAGAGAAATAATGGAGAAAATATTATTGAATTGCGCATCTAAATTGTTACATGAAGACCCTATTTATAGACACTACATTGAAAACCTTTTCCAACTAGAATTCCTATTGTAATTCCTATTCTAAGTAAGAAATATTTATTCCTATTCTAACAACCTCTATCCTGGATTTGATCTTCTATTTTGTGTTTGTGGCCCTCATCATGTCAAATTATATTGTTTGTAGTAAAAGAGAAGAATTGTTTGTACGTACTACATGTGTCTATTTCATGTCTATTGAAAGTTATTCCTTTTGATTAATTAAATCAACATTAGTGGCTATCTTAATGTTTATATTCTACAACGACTTGAGCTAGTATTTTTCTTACAGAATGCTCTGTTAACAGAGCAACAATCAGCAGCCATACAAGCACTTTCCCATGCAGTTGCCGAGAGACCTTTCCCGTCCAATTTGGTGAGTTTTTCCTTCTTGGTTGGTTTCAGAATATATCTATCTCTAACTCAATTACCTGAAATATGTTTTTATTTCAATTTCCAGGACCAAGTTTCTGGACATGATAACAGCCTCTCTGTTTCAACAAAGCTTAGTTCTCTAGAGGATTCAGGGGCCATTGAAGCAGTCCTAGTGAATACAAATCAGGTGAGTTACTTTTGAAAGACTGGAGTGGAGTTTCCTTCCAGTTGAGGAGTAGTCTCCATTCTCTTATTTTCTTTGGTGCACACAGGGGGTACCTGGTGTATAGATAATTAGTTGGAGTTCGTAGACAATCATATCTTGTTGTAGATGCTTTGCCTTTTGGTATACGCCTTGTATATGGCCAGTTTGCGAATATGAATGAAAAAATATTTACCTGATTAAAAAAAACCCAATTTTTAGTTGGCATGTCCTTTATCTTTTACATTTCCCGGTTGCAGATCTTAGTATTCCATATTTCAAATAAGGGATCGTGAATGATATTCCCTTATAAAAAAGGTTGCATGATCAACTAAATTTTGGGCAAGGAATCAAAACAAATAAAATCTTGCAACCAATGCTAAATGATAGACTTATATTTCTACAAGACTAGAAGTTGTAGTGTGTTATACTCAAAGGCTCATCTGCCACACATAACTGCTAAACCAGTGAAATCTTCTTTTTGATAAGATAACTGCTAAAATCGATGAGTTGAGCAGAAGGCCTGATAATTGCTTGTTACAAAGCCCCATCCATTGTTTTGGCTTACTAGATAATATGCGTCTCATTTGTTCCGGATGATTGTCATTAACTAGAGAGGGTAAACCTTATGCCGGGCAAAGGATGACTAGAACTTACATTTAGTGAGAAATGACCCTGATACTCAATGTCTTCTGGGGTAGAAATACCTAAATTGCATGTGATGGGTCAAGGGATGATGACCATAGTGGCTGTTTATGGCCTTGATCCTGCCTATTTTAGTGGAGCAGGTTTTGTGTCTATATATCAGAAAGACATGCAAAAGAAATTTCTTCTAGAACTCTCCTCCATATTTGAACTTTGGTAGCCCTAGAAGTTATTTTCTTTTTCTCCTTTTGTTTTATCCTAATGTCTTTTGATAAGGAGATTTTCGGATCATTATGTTATTATATACCTCATCACTAAAAAAGAGTTCTCTGTGAAAGACAACCAACAATTTATACACACAATAAACTTGTAAGTGCACAAAAAATTAACAATAGGAGGTTATTTCTCAACTGTACGAAATCATAATCCACCCCTTTCAAAAGACCTCCTACTTCTCTCCTTCTAAAGAACCACTGGAGCTAACGGAGCTACATCCCATTTCACTTCTTCTCCTCTTTATTGTAAAGCCCCCCACTCCCCCAGCATTTGCATGATTCTTAAATTTCAAAAATGTTAAAAGTAAGTGGTCACAACTGCCAGGCTATTAGGCAGTGTAGTTGGAGTTAATTAACATCCTCAACCCTCATTTCACACATGTAACACTTTTTGCATATATCAGGCAGCTTTCTTGAAGGAATTGCTCTATAAGTACTGCTTCATATGTTGCTGTCCAGCAAAAGCAAGCCACTTAATAAGGAGCTTCAGTTTTCCAAATTTGTTTCCATGTCAATCTTTGTGTTGCCGCCTTGTATATGCTTGAATACTGCATATGCTTAATTGTCTATGTAAATGATGATATTAATGGCATCTTAATTGACCTTTCCCCTTATGCTGCTTGAACTTGATATGAGTTTCCTCTTCCCCTTTGTTTATTTTGTTGATACAGTTTTATAAGTGGTTCGCGGATCTTGAAGCAGCCATGAAATTAGAGGTTGGTCTTTAGCTTGTTTATATGTCTTCCGTTTCTTCCAAAAGTTGTGAGTCATACGTTTCATCTTTTTCACTTGCGGACTAAAAGATATTACATATGCTTTCTTTCTATATATAGTCTGAAGAAAAATATCAGCATTATGCCAGCACCTTAACAGAGCAGATTCAGACCTGCGATAGTATACTTCACCAGGTATTCTGAGAAGAAAAATAATGCTCTTATACTCTTCTCTTAAGCCTTTTGTTGTTGCTGTTCATCTAACTATGCTCGAGTCGACATGCCCTTGCCCTTAAAATTGGCTCTCTTGCAGGTGGATGAAACACTTGACTTGTTCAATGAGTTGCAATTGCAGCATCAAGCAGTGGCAACAAAGACAAGAACTCTTCATGATGCGTGCGATAGACTGGTGTGTCAACCCATTTCTCTTAGCATCTGTGGTTACTTAGCTGTAGATTGTACTTTTCTCTTTCATTCTGTTCAAAATTCTGAGGAGCAGAGGAGCAATTAATTGTATGATAAGAAGATAGGCTTGTAACTATGTAGTTCAATTTCTTAATCAACATTGTTTTGCTTACTCTATGATGTTGAAAGTCTTCATTGGCAATCTACTATATTGATGGATTAAAATCTATGATATCTTTTATAGTTGCCAAACATCTTCAATTGCCACCTAGTACCTTGTAAATGCATTTCTTCATTTTGCATTTCTAGTTTTTTCTTTTATCTGAAGTTGCTGTTTGTCTTAAAGCATTATCTAGTTACCATTCATGTCAATGTTGTGTATTCTAATGTCCAGTGAGTGGCATTTGAAATTCGGAGTTCCCTATCAGTGTCTAATATTAATGGACATGTGATGTACAGGTAAAGAGGCAATAATTAACTACAAGAAGCAGCATTGAATAATATTCTTGTGTAACTTCTTTTTTGTTTGAAGCTTTTGGAGAAGCAGAAAATAATTGAGTTTGCAGAATCACTTCACAATAAGCTCAATTACTTTGATGAATTGGAGAATGTAAGGTCCGGCTGCCATTTCTGTTGATAATATTCCATTGTTATTCAATGCCTTTTGCACTATTTCCACAGTAGTCTATCTATGCCTATCTGAATTAGGTATGGTTCTGCATCAACTTTATTTTGAGTGAAGAGAATTGATGCTATCTGTATTTTTTATGCTTTGATACTCGGTGAGGAAATATACCTAACTGAGAGTTTGAACTATGGAAAACAGCTTTAAGAGATTAGAGCTTTCTGCCTCAAGAGATTTCATGTTTTTTAATTAAATTTTTTCCACACCCATACATCGGAGGGCAGAGCTTTATCCTTTGTAAATAAAGCTTTGGTTCTAGATTGTTTTCTTCCTCATGTTACAAATGAGTCACCCAAAGCTATTCTGTCTTGGCTTTTCCAATCTAGTTCTTTTGGATTATTTTGATGTTCTTGCTTAGCGAGTTATTTATTTAAGATGATTTTTTTAATCTCGTCTTTTGGTCAACTCTTCTTTCTCCTATTTATGTGCTTGGTGGTTTCTAAAGGAAAACTTTTTCACTTGTGAGATTGAGAATGAGAGTTCCTGTTTTAATTTTTTTTTTTTGGAACTGAGAGTTCCTTTTTTTAAATTCCTTAAAGAGGAATAGCTTTTCACTCTCTACTGTACATATTCTTGATTTAATCATGACCATTAGACTAAAATTTTCTAATTCCTTTTTGTTTAATTACATCTAATTGGTGTATCAACTTGATTTGTCTTGTGCTAAATTTTCTCTTCAAGTCCTGCTCTTCTCCTACTTGAACTTCTCCAAATGTCAAAGTACCCAGTTTTATGTTTTTTTTTTTTTGATTTGATTCCTCATGCTTGTCTTGCACTCTTGTTTGCAGGTTGCTACCACTTTTTATTCTCCTAGCATGAGCGTTGGTAGTACAAATTTTCTTCCATTGCTAAAGAGACTTGATGAGTGCATATCCTAAGTGACATTACATTTCATATTACTGCATTGAAATCTATGAATATTAGAACCACTGCAATGTTGTACCATCCATGCTTTTCTTTGGTTATTTGTGAAGTTTACTATGTGGACATGTCTAGAGTCACAGGTTTCTTCTAGGGATATGACTTCTTTTATCAAGATTAAGTTCTATTGAGTTAAGCTTGTAAATCTATGCATAAGAGCACAAATAACCTTTGTGTTTCTCCTCTGCATCACTGAAGATATGTAGAGAGTAGTAACCCACAATATGCAGAGTGCAGCATTTATTTGGTCAAGTTTCGACAACTTCAGGTACTTAAAAGAATTGACATCAACATTATGTAATTTACTATCATATATAAAATTGCATTTCTTTATACAAGGCATGATTTTATGGCATTCTTGGACATATGAATTCTAATCCCATTGCCCATTCTCCTTCTCTCTGTCTGTGTTACCTTGGCCCCCTTGTAACAGTCTCGAGCTCTGGGAATGATTCGCACTCACGTTCTTTCCGTTCTT</genome_strand>
        <mrna_strand>CGACGGCGACGGCGACGGCGACAAGGCCTGGTGTTCCAAAGTCGGCAGCTATTTCCAAAGGCTATAATTTCGCTTCTACTTGGGAACAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCTCCGTTAACAGAGCAACAGCAAGCAGCCATACTAGCACTTTCCCATGCAGTTGCTGAAAGGCCTTTCCCGTCCAATTTG....................................................................................GATCAAGTTTCTGGACACAATAACAGTCTCTCTGTGTCAACAAAGCTCAGTTCTATGGAGGATTCAGGGGCCATTGAAGCAGTCCTTGTGAATACAAATCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTACAAGTGGTTTGCGGATCTTGAAGCAGCCATGAAATCAGAG.....................................................................................................................ACTGAAGAAAAATATCAGCATTATGTCAACACCTTAACAGAGCAGATTCAGACCTGCGATAGTATACTTCACCAG......................................................................................................................GTGGATGAAACACTTGACTTATTCAATGAGCTGCAGTTGCAGCACCAAGCAGTGGCAACAAAGACTAGAACCCTTCATGATGCGTGTGATAGACTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTGGAGAAGCAGAAATTAATTGAGTTTGCAGAATCACTTCACAATAAGCTCAATTACTTTGATGAATTGGAGAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCGACCACTTTTTATTCTCCTAGCATGAGCGTTGGTAGTACAAATTTTCTTCCATTGCTTAAAAGACTTGATGAGTGCATATCATATGT.......................................................................................................................................................................................................................................................TGAG-AGTAATCCACAATATGCAGAGTGCAGCATTTATTTGGTCAAGTTTCGACAACTTCAG.....................................................................................................................................................................TCTCGAGCTCTGGGAATGATTCGCTCTCATGTTCTTTCTGTTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E454964" ref_strand="+" ref_description="SGN-E454964 [cSTS-24-L20]">
      <seq>cgacggcgacggcgacggcgacaaggcctggtgttccaaagtcggcagctatttccaaaggctataatttcgcttctacttgggaacagaatgctccgttaacagagcaacagcaagcagccatactagcactttcccatgcagatgctgaaaggcctttcccgtccaatttggatcaagtttctggacacaataacagtctctctgtgtcaacaaagctcagttctatggaggattcaggggccattgaagcagtccttgtgaatacaaatcagttttacaagtggtttgcggatcttgaagcagccatgaaatcagagactgaagaaaaatatcagcattatgtcaacaccttaacagagcagattcagacctgcgatagtatacttcaccaggtggatgaaacacttgacttattcaatgagctgcagttgcagcaccaagcagtggcaacaaagactagaacccttcatgatgcgtgtgatagactgcttttggagaagcagaaattaattgagtttgcagaatcacttcacaataagctcaattactttgatgaattggagaatgttgcgaccactttntattctcctagcatgagcgttggtagtacaaattttcttccattgcttaaaagacttgatgagtgcatatcatatgttgagagtaatccacaatatgcagagtgcagcatttatttggtcaagtttcgacaacttcagtctcgagctctgggaatgattcgctctcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="-" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="77615" stop="67412"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77321" g_stop="77233" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="89" r_length="89" r_score="0.809"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="77232" i_stop="72103" i_length="5130">
            <donor d_prob="0.996" d_score="0.94"/>
            <acceptor a_prob="0.986" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72102" g_stop="72019" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="90" r_stop="173" r_length="84" r_score="0.893"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72018" i_stop="71935" i_length="84">
            <donor d_prob="0.992" d_score="0.90"/>
            <acceptor a_prob="0.997" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71934" g_stop="71833" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="275" r_length="102" r_score="0.912"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="71832" i_stop="70227" i_length="1606">
            <donor d_prob="0.980" d_score="0.94"/>
            <acceptor a_prob="0.997" a_score="0.93"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="70226" g_stop="70182" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="276" r_stop="320" r_length="45" r_score="0.933"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="70181" i_stop="70065" i_length="117">
            <donor d_prob="0.959" d_score="0.93"/>
            <acceptor a_prob="0.847" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="70064" g_stop="69990" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="395" r_length="75" r_score="0.960"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="69989" i_stop="69872" i_length="118">
            <donor d_prob="0.914" d_score="0.96"/>
            <acceptor a_prob="0.917" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="69871" g_stop="69776" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="396" r_stop="491" r_length="96" r_score="0.927"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="69775" i_stop="69248" i_length="528">
            <donor d_prob="0.832" d_score="0.94"/>
            <acceptor a_prob="0.926" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="69247" g_stop="69170" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="492" r_stop="569" r_length="78" r_score="0.987"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="69169" i_stop="68307" i_length="863">
            <donor d_prob="0.920" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="68306" g_stop="68215" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="570" r_stop="661" r_length="92" r_score="0.935"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="68214" i_stop="67968" i_length="247">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="67967" g_stop="67906" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="662" r_stop="722" r_length="61" r_score="0.952"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="67905" i_stop="67741" i_length="165">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.630" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="67740" g_stop="67711" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="723" r_stop="752" r_length="30" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="-" ref_id="SGN-E454964" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>753</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E454964" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77321" e_stop="77233"/>
          <exon e_start="72102" e_stop="72019"/>
          <exon e_start="71934" e_stop="71833"/>
          <exon e_start="70226" e_stop="70182"/>
          <exon e_start="70064" e_stop="69990"/>
          <exon e_start="69871" e_stop="69776"/>
          <exon e_start="69247" e_stop="69170"/>
          <exon e_start="68306" e_stop="68215"/>
          <exon e_start="67967" e_stop="67906"/>
          <exon e_start="67740" e_stop="67711"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAATACTATGGCGGCAACGACAAGGCCGGGGGTTCTCAAGTCCGAAGCTGTTTCCAAAGGCTATAATTTCGCTTCTACTTGGGAACAGGTTCACTCTCTATTTTCTACATTGTTCAGATTTTCTCCAGATTTACTAGATTTGTTTGAACGCATAACCAAAATTATGTAGATATCTGATTCTATGACAAATTTTGATGACCGGATTTTTATCATATGCACTGATCCTGTTGAAATAATGAATAGTAAAGCGGTGATTGGAAAAGGGGATCAAATTACATTGGATTATTGCTTGATTTCTTGGATTCCTTACAGCTTAAGAAAATCCAGCAAATCTTTTAACTATATCTTAGTAATATCTTGGTACTAAGTTTCTCTAATAAATTTTATCACTTACCCAAAAAAGGTGAAAAAAAGGAGGATCAGAATTGTTTCTTTGTGCGATAAAGTTCTCAGTTGATTTTAACATGTGTTTGTCGTCTCATTTCAACGGCAAGGTTTAGCTGCTGGTGATTGTGTCGCATATTCTCCGTTGAACTATCTTTTGAAGTTTTATTTTCATTGTAATGTGACACTGCTTCTCTTTTTCCTCGTATAACCACCGGCTAACTAGCTGCTGAAACTTTTACTTTTAGCTTATTCTTGCAATAGCTATTGGAAAATCACCTTTGAGAGAAATAATGGAGAAAATATTATTGAATTGCTCATCTAAATTGTTACATGAAGACCCTATTTATAGACACTACATTGGAAATCTTTTCTAACTAGAATTCCTATTCTAAGTAAGAAATACTTATTTCTATTCTAACACTCCCCCTCAAGCTGGTGCATACAAATTATATGCACCTAGCTTGTTACAGATGTAATTAATACGAGGACATGTGAGAGACTTAGTGAACATATCCGCAAGCTGATCATTTGACTTCACAAATTTTGTAACAATATCTCCTGAGAGTATCTTTTCTCTGAGAAAGTGACAGTCAATCTCAATGTGCTTAGTCCTTTCATGAAACACTGGATTTGATGCGATATGAAGAGCCGCTTGATTATCACACAAAAGTTCCATCTGATCAATTTTGCCGAATTTTAGTTCTCCCAGTAATTATTTGTGCCAAACTAACTCACAAGTTGCTGTCGCTATTGCTCGATATTCTGATTCTGCACTAGATTGAGAAGCCACATTTTGTTTCTTACTCTTCCACGACACCAAATTACCTCCAACTAAAACACAATATCCGGATGTCAAACGTCTGTTAGAGGGTAATCCTGCCCAATCAGTGTCTGTATATCCAATAATATGCTCATGACCTTGATCCTCAAAGAGTAGTCCTTTGCCGGGGGCTGACTTTATATATCGAAGAATATGAACAACTGCTTCCCAATGACTATCACAAGGGGAAGTCATAAACTGACTTACAACACTCACGGGAAAAGAGATGCCTGGTCTAGTCACTATGAGATAATTCAACTTTCCAACAAGTCGTCTATACCTTTAAGGATTACTAAGTGGCTCCACCTGTCTCGGAAGAAGTTTAACATTCGGATCCATCGGAGTGTCAATAGGTGTACATCCCATCATTCCTGTCTCCTCAAGAATGTCTAAGGCATACTTGTGTTTAGAGATAACAATGCCTGATCTAGATTGAGCAACCTCAATACCTAGAAAATACTTCAATCTACCAAGGTCTTTTGTCTGAAAGTGCTTAAAAAGATGTTGCTTTATATCGGTGATATAGTCTTGATCATTATCAGTGGTAACAATATCATCAACATAAACAACCAAATAGATACATCGACCTGGTGCAGAATGTCGATAAAACACAAAGTGATTTGATCCATTACGAGTCATGCCAAACTTCTGAATTACTGTGCTAAACTTCCCAAACCAAGCTCGAGGAGACTGTTTCAGACCATAGAGTGACCTACGCAATCGACATACAAGGCTACTAGACTCCCCCTGAGCAACAAAACTAGGTGGTTGCTCCATATAGACTTCTTCCTCAAGATCACTAGCAGAAAAGCATTCTTTATGTCCAACTGATAAAGAGGACAATGACGAACAACAACCATAGATTAGAAAAAGACGAACATATGCTATTTTAGCCACAGGAGCAAAAGTGTCACTATAATCTAGCCCAAATATCTGAGTATACCCTTTGGCGACAAGGAGAACCTTAAGTCGATCAACCTAACCATCTAGACCAATTTTGACTGCATAAACCCAATGACAACCAACAGTAGATTTACATGCAGGAAGGGAGACAAGCTCCCAAGTATCACTCTTATGTAAAGCAGACATCTCATCAACCATAGCCTGCCTCCATCTAGAATGAGAAAGTGCTTCACCTATAGTCTTAGGAATGGAAATAGAGGACAATGACGACACAAAGGCATAATGGGTGATGATATATGATGATAACTTAAGAAGGTAAATGCGGGTTAGTATTTCGAGTAGATTGTATACCTTTTTGAAGTGCAAGCGGTGGGCTAGGTAGAGGCAAGTCCGCAGTAGGAGCAGGGTCTGGCGCATGACATGAATCATCTGGGACTAGGGTTGGATGTGGACGACGATGATAAGTTAGTAGTGGTGGCACTGCAACTGGAGATGTAGACGTAACTGTAGATCCCTCAAAGGTTGGCACAGGTAAAATTTGAGGTATGGGTAAGACCATAGAGACATCACTACGATCAGAAGATGTATAATAAGGCTGAGACTCAAAAAATGTAACATCAACAGACATAAGGTATCGGTGAAGAACATGTGAATAACAACGATATCCTTTTTGAACTCTAGAGTAACCAAGAAAGACACATTTGAGGCACGAGGAGCTAATTTATCTTTTCCTGGGGCTAAATTATGAAGAAAGCATGTACTCCAAACGACACGAGAGGGGATAGGATAAAGATGTGACTGAGGAAACAATATGGAATATGGAACATGATTTTGAATATAAGAAGAGGGCATTCTGTTAATTTAATAATAAGCAGAAAGGACTGCATCGCCCCAAAAATGCATCGAAACATGGCAATTCTATGAGGAGAGTGCGAGCAGTCTCTATGAGATATGCCTATTCTTTCTTTCTGCGACACCATTTTGTTGAGGAGTGTATGGACAAGATGTTTGGTGAATGATTCCGTGGTGAGACATAAATTCCTGAAATTGGGGTGATAAGTATACTAAGGCATTATCACTACGGAATGTACGAATAGAAACACCAAACTGATTTTGTATTTCAGCAAAGAAAACTTTGAAAATAGAAAATAACTCAGAACGATCTTTCATTAAGAAAACCCAAGTGCATCTCGAATAATCATCAATGAAACTAACAAAATAACGAAATCCTAAGGGGGAACTGACTCTACTAGTACCCCAAATATTAGAATGAACTAATGAAAAAATAGACTCTGAACGACCCTCAGTACTACGAGAAAATGTAGCACGAGTGTGTTTCCCAAATTGACACGACTCACAATCTAATGTGGATAAACCAGACAAACTAGGTACCATCTTTTTCAATTTGGATAGACTTGAGTGTCCCAAACGTTTGTGAATTAGATCTGAGGAATCTGTAACGGAGCATGCTATTAAAGAATTAGAAGAGGTAAGATAGTAAAGGCCTTGTGATTCATATCTTGTTCCAATAGTCTGTCCTGTACTGCGGTCCTGCATGACAAAGAAATGATCAAAAAAATTATGCTACAATGTAGGGCTTTCGTCAAACGACTAACCGATGCTAGATTAAAAGGAGAACCAGGGACATAAAGAACAGAGTCAAGAGTGACAGAAGATATGGGTTTGGCTTTTCCAACCCCTTTTGGTTTTGTTTGTATCCCATTGGCTAATGTAATAGATGAAAGAGATTATGAATAGATTATATCAGATAAAAGTGATTTATTACCAGTGATATGATCAGAAGCCCCCGATTCTATGACCCATGATCCAATAGTGTTAGACTGTGATATACTAGTACAAAATATTACCCGCAACAGAAACATTAGGTTTTGCAATCGAAACTACTTGTAGAGACGTTTGTTTATTTGCACAATACGGAAAAAACTCTATATATTCCTTTAGAACAACAGGATCATAACTGGGTGATCCACCATGCAAAATAAAACATATGTCACGAGTGTGTCCAGGTTTATGACATGACTACACTTAGATCGAGATTTTTCAAAAAATTCTCTCCCCCGTCTATTCTCCATGGATTTGTATGTACGCTTGGAACTGCCAGAAGCTGCTACACAAGTCTGAAAATATTGGAAGCTGCCGAAATCTGCCCGCAGTGGCCTGAAAAATTCTGATATTGCCGGAATTTTGCTGGGAACTGCCCAAAAAAAATCACCGGAACCCTAATTTCGGTGATCGGATCTAGAGATAACTGTATGGTTCTTACCGAAAACACTGGACGACCCTAACAGAAGAGAGAAACTCGAAAAAAAGAAGAGAGACCCGAGCAGCACTCACGCGCCGGAAGCTGCCCAAAAATCACCGCAACCCTAATTTCGGTGATCGAATCTAAATAAAAATGGTCAAAAACAGTATAGTCTGGGTCGGAATGGCTGGACGACCCCACCTGTCGAAAAAAATCTCAAAGACTATGGACGGAAAAGTCCTCACGCGCCGGCGAGTGAGCCAGATCTCGCCGGAATCTGCCACCTTCGATCGGCGCGTGAGGGCGCGTGCGGTGCTGTTTTCTGGTGGTTCTTGCTGGGGTTTGGTCGCGGGAGGTTTCCTAGCCTCGTGTTGGTGTTGGTTTTCGCACAACACCCACTAAATAAAAAATGATAAAATCAGTCCCAAACGTCACCGGAAATTGAATTGTTTGTTTCTCACCAATGCCCTGATACCATGAGAGAAATAATGGAGAAAATATTATTGAATTGCGCATCTAAATTGTTACATGAAGACCCTATTTATAGACACTACATTGAAAACCTTTTCCAACTAGAATTCCTATTGTAATTCCTATTCTAAGTAAGAAATATTTATTCCTATTCTAACAACCTCTATCCTGGATTTGATCTTCTATTTTGTGTTTGTGGCCCTCATCATGTCAAATTATATTGTTTGTAGTAAAAGAGAAGAATTGTTTGTACGTACTACATGTGTCTATTTCATGTCTATTGAAAGTTATTCCTTTTGATTAATTAAATCAACATTAGTGGCTATCTTAATGTTTATATTCTACAACGACTTGAGCTAGTATTTTTCTTACAGAATGCTCTGTTAACAGAGCAACAATCAGCAGCCATACAAGCACTTTCCCATGCAGTTGCCGAGAGACCTTTCCCGTCCAATTTGGTGAGTTTTTCCTTCTTGGTTGGTTTCAGAATATATCTATCTCTAACTCAATTACCTGAAATATGTTTTTATTTCAATTTCCAGGACCAAGTTTCTGGACATGATAACAGCCTCTCTGTTTCAACAAAGCTTAGTTCTCTAGAGGATTCAGGGGCCATTGAAGCAGTCCTAGTGAATACAAATCAGGTGAGTTACTTTTGAAAGACTGGAGTGGAGTTTCCTTCCAGTTGAGGAGTAGTCTCCATTCTCTTATTTTCTTTGGTGCACACAGGGGGTACCTGGTGTATAGATAATTAGTTGGAGTTCGTAGACAATCATATCTTGTTGTAGATGCTTTGCCTTTTGGTATACGCCTTGTATATGGCCAGTTTGCGAATATGAATGAAAAAATATTTACCTGATTAAAAAAAACCCAATTTTTAGTTGGCATGTCCTTTATCTTTTACATTTCCCGGTTGCAGATCTTAGTATTCCATATTTCAAATAAGGGATCGTGAATGATATTCCCTTATAAAAAAGGTTGCATGATCAACTAAATTTTGGGCAAGGAATCAAAACAAATAAAATCTTGCAACCAATGCTAAATGATAGACTTATATTTCTACAAGACTAGAAGTTGTAGTGTGTTATACTCAAAGGCTCATCTGCCACACATAACTGCTAAACCAGTGAAATCTTCTTTTTGATAAGATAACTGCTAAAATCGATGAGTTGAGCAGAAGGCCTGATAATTGCTTGTTACAAAGCCCCATCCATTGTTTTGGCTTACTAGATAATATGCGTCTCATTTGTTCCGGATGATTGTCATTAACTAGAGAGGGTAAACCTTATGCCGGGCAAAGGATGACTAGAACTTACATTTAGTGAGAAATGACCCTGATACTCAATGTCTTCTGGGGTAGAAATACCTAAATTGCATGTGATGGGTCAAGGGATGATGACCATAGTGGCTGTTTATGGCCTTGATCCTGCCTATTTTAGTGGAGCAGGTTTTGTGTCTATATATCAGAAAGACATGCAAAAGAAATTTCTTCTAGAACTCTCCTCCATATTTGAACTTTGGTAGCCCTAGAAGTTATTTTCTTTTTCTCCTTTTGTTTTATCCTAATGTCTTTTGATAAGGAGATTTTCGGATCATTATGTTATTATATACCTCATCACTAAAAAAGAGTTCTCTGTGAAAGACAACCAACAATTTATACACACAATAAACTTGTAAGTGCACAAAAAATTAACAATAGGAGGTTATTTCTCAACTGTACGAAATCATAATCCACCCCTTTCAAAAGACCTCCTACTTCTCTCCTTCTAAAGAACCACTGGAGCTAACGGAGCTACATCCCATTTCACTTCTTCTCCTCTTTATTGTAAAGCCCCCCACTCCCCCAGCATTTGCATGATTCTTAAATTTCAAAAATGTTAAAAGTAAGTGGTCACAACTGCCAGGCTATTAGGCAGTGTAGTTGGAGTTAATTAACATCCTCAACCCTCATTTCACACATGTAACACTTTTTGCATATATCAGGCAGCTTTCTTGAAGGAATTGCTCTATAAGTACTGCTTCATATGTTGCTGTCCAGCAAAAGCAAGCCACTTAATAAGGAGCTTCAGTTTTCCAAATTTGTTTCCATGTCAATCTTTGTGTTGCCGCCTTGTATATGCTTGAATACTGCATATGCTTAATTGTCTATGTAAATGATGATATTAATGGCATCTTAATTGACCTTTCCCCTTATGCTGCTTGAACTTGATATGAGTTTCCTCTTCCCCTTTGTTTATTTTGTTGATACAGTTTTATAAGTGGTTCGCGGATCTTGAAGCAGCCATGAAATTAGAGGTTGGTCTTTAGCTTGTTTATATGTCTTCCGTTTCTTCCAAAAGTTGTGAGTCATACGTTTCATCTTTTTCACTTGCGGACTAAAAGATATTACATATGCTTTCTTTCTATATATAGTCTGAAGAAAAATATCAGCATTATGCCAGCACCTTAACAGAGCAGATTCAGACCTGCGATAGTATACTTCACCAGGTATTCTGAGAAGAAAAATAATGCTCTTATACTCTTCTCTTAAGCCTTTTGTTGTTGCTGTTCATCTAACTATGCTCGAGTCGACATGCCCTTGCCCTTAAAATTGGCTCTCTTGCAGGTGGATGAAACACTTGACTTGTTCAATGAGTTGCAATTGCAGCATCAAGCAGTGGCAACAAAGACAAGAACTCTTCATGATGCGTGCGATAGACTGGTGTGTCAACCCATTTCTCTTAGCATCTGTGGTTACTTAGCTGTAGATTGTACTTTTCTCTTTCATTCTGTTCAAAATTCTGAGGAGCAGAGGAGCAATTAATTGTATGATAAGAAGATAGGCTTGTAACTATGTAGTTCAATTTCTTAATCAACATTGTTTTGCTTACTCTATGATGTTGAAAGTCTTCATTGGCAATCTACTATATTGATGGATTAAAATCTATGATATCTTTTATAGTTGCCAAACATCTTCAATTGCCACCTAGTACCTTGTAAATGCATTTCTTCATTTTGCATTTCTAGTTTTTTCTTTTATCTGAAGTTGCTGTTTGTCTTAAAGCATTATCTAGTTACCATTCATGTCAATGTTGTGTATTCTAATGTCCAGTGAGTGGCATTTGAAATTCGGAGTTCCCTATCAGTGTCTAATATTAATGGACATGTGATGTACAGGTAAAGAGGCAATAATTAACTACAAGAAGCAGCATTGAATAATATTCTTGTGTAACTTCTTTTTTGTTTGAAGCTTTTGGAGAAGCAGAAAATAATTGAGTTTGCAGAATCACTTCACAATAAGCTCAATTACTTTGATGAATTGGAGAATGTAAGGTCCGGCTGCCATTTCTGTTGATAATATTCCATTGTTATTCAATGCCTTTTGCACTATTTCCACAGTAGTCTATCTATGCCTATCTGAATTAGGTATGGTTCTGCATCAACTTTATTTTGAGTGAAGAGAATTGATGCTATCTGTATTTTTTATGCTTTGATACTCGGTGAGGAAATATACCTAACTGAGAGTTTGAACTATGGAAAACAGCTTTAAGAGATTAGAGCTTTCTGCCTCAAGAGATTTCATGTTTTTTAATTAAATTTTTTCCACACCCATACATCGGAGGGCAGAGCTTTATCCTTTGTAAATAAAGCTTTGGTTCTAGATTGTTTTCTTCCTCATGTTACAAATGAGTCACCCAAAGCTATTCTGTCTTGGCTTTTCCAATCTAGTTCTTTTGGATTATTTTGATGTTCTTGCTTAGCGAGTTATTTATTTAAGATGATTTTTTTAATCTCGTCTTTTGGTCAACTCTTCTTTCTCCTATTTATGTGCTTGGTGGTTTCTAAAGGAAAACTTTTTCACTTGTGAGATTGAGAATGAGAGTTCCTGTTTTAATTTTTTTTTTTTGGAACTGAGAGTTCCTTTTTTTAAATTCCTTAAAGAGGAATAGCTTTTCACTCTCTACTGTACATATTCTTGATTTAATCATGACCATTAGACTAAAATTTTCTAATTCCTTTTTGTTTAATTACATCTAATTGGTGTATCAACTTGATTTGTCTTGTGCTAAATTTTCTCTTCAAGTCCTGCTCTTCTCCTACTTGAACTTCTCCAAATGTCAAAGTACCCAGTTTTATGTTTTTTTTTTTTTGATTTGATTCCTCATGCTTGTCTTGCACTCTTGTTTGCAGGTTGCTACCACTTTTTATTCTCCTAGCATGAGCGTTGGTAGTACAAATTTTCTTCCATTGCTAAAGAGACTTGATGAGTGCATATCCTAAGTGACATTACATTTCATATTACTGCATTGAAATCTATGAATATTAGAACCACTGCAATGTTGTACCATCCATGCTTTTCTTTGGTTATTTGTGAAGTTTACTATGTGGACATGTCTAGAGTCACAGGTTTCTTCTAGGGATATGACTTCTTTTATCAAGATTAAGTTCTATTGAGTTAAGCTTGTAAATCTATGCATAAGAGCACAAATAACCTTTGTGTTTCTCCTCTGCATCACTGAAGATATGTAGAGAGTAGTAACCCACAATATGCAGAGTGCAGCATTTATTTGGTCAAGTTTCGACAACTTCAGGTACTTAAAAGAATTGACATCAACATTATGTAATTTACTATCATATATAAAATTGCATTTCTTTATACAAGGCATGATTTTATGGCATTCTTGGACATATGAATTCTAATCCCATTGCCCATTCTCCTTCTCTCTGTCTGTGTTACCTTGGCCCCCTTGTAACAGTCTCGAGCTCTGGGAATGATTCGCACTCAC</genome_strand>
        <mrna_strand>CGACGGCGACGGCGACGGCGACAAGGCCTGGTGTTCCAAAGTCGGCAGCTATTTCCAAAGGCTATAATTTCGCTTCTACTTGGGAACAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCTCCGTTAACAGAGCAACAGCAAGCAGCCATACTAGCACTTTCCCATGCAGATGCTGAAAGGCCTTTCCCGTCCAATTTG....................................................................................GATCAAGTTTCTGGACACAATAACAGTCTCTCTGTGTCAACAAAGCTCAGTTCTATGGAGGATTCAGGGGCCATTGAAGCAGTCCTTGTGAATACAAATCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTACAAGTGGTTTGCGGATCTTGAAGCAGCCATGAAATCAGAG.....................................................................................................................ACTGAAGAAAAATATCAGCATTATGTCAACACCTTAACAGAGCAGATTCAGACCTGCGATAGTATACTTCACCAG......................................................................................................................GTGGATGAAACACTTGACTTATTCAATGAGCTGCAGTTGCAGCACCAAGCAGTGGCAACAAAGACTAGAACCCTTCATGATGCGTGTGATAGACTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTGGAGAAGCAGAAATTAATTGAGTTTGCAGAATCACTTCACAATAAGCTCAATTACTTTGATGAATTGGAGAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCGACCACTTTNTATTCTCCTAGCATGAGCGTTGGTAGTACAAATTTTCTTCCATTGCTTAAAAGACTTGATGAGTGCATATCATATGT.......................................................................................................................................................................................................................................................TGAG-AGTAATCCACAATATGCAGAGTGCAGCATTTATTTGGTCAAGTTTCGACAACTTCAG.....................................................................................................................................................................TCTCGAGCTCTGGGAATGATTCGCTCTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E330789" ref_strand="+" ref_description="SGN-E330789 [cTOD-8-P22]">
      <seq>gtaaataaagctttggttctagattgttttcttcctcatgggacaaatgagtcacccaaagctattctgtcttggcttttccaatctagttcttttggattatcttgatgttcttgcttaacgagttattcatttaaaatgatggtggtagtctcagcctttggtcaactcttctttctcctatttatgtgcttggtggtttctaaaggaaaactttttcacttgtgagattgagaatgagagttcctgttttaattttttttttttggaactgagagttcctttttttaaattccttaaagaggaatagcttttcactctctactgtacatattcttgatttaatcatgaccattagactaaaattttctaattcctttttgtttaattacatctaattggtgtatcaacttgatttgtcttgtgctaaattttctcttcaaggcctgctcttctcctacttgaactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="-" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="69157" stop="68089"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68857" g_stop="68389" g_length="469"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="469" r_length="469" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="-" ref_id="SGN-E330789" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>469</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E330789" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68857" e_stop="68389"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAAATAAAGCTTTGGTTCTAGATTGTTTTCTTCCTCATGTTACAAATGAGTCACCCAAAGCTATTCTGTCTTGGCTTTTCCAATCTAGTTCTTTTGGATTATTTTGATGTTCTTGCTTAGCGAGTTATTTATTTAAGATGATTTTTTTAATCTCGTCTTTTGGTCAACTCTTCTTTCTCCTATTTATGTGCTTGGTGGTTTCTAAAGGAAAACTTTTTCACTTGTGAGATTGAGAATGAGAGTTCCTGTTTTAATTTTTTTTTTTTGGAACTGAGAGTTCCTTTTTTTAAATTCCTTAAAGAGGAATAGCTTTTCACTCTCTACTGTACATATTCTTGATTTAATCATGACCATTAGACTAAAATTTTCTAATTCCTTTTTGTTTAATTACATCTAATTGGTGTATCAACTTGATTTGTCTTGTGCTAAATTTTCTCTTCAAGTCCTGCTCTTCTCCTACTTGAACTT</genome_strand>
        <mrna_strand>GTAAATAAAGCTTTGGTTCTAGATTGTTTTCTTCCTCATGGGACAAATGAGTCACCCAAAGCTATTCTGTCTTGGCTTTTCCAATCTAGTTCTTTTGGATTATCTTGATGTTCTTGCTTAACGAGTTATTCATTTAAAATGATGGTGGTAGTCTCAGCCTTTGGTCAACTCTTCTTTCTCCTATTTATGTGCTTGGTGGTTTCTAAAGGAAAACTTTTTCACTTGTGAGATTGAGAATGAGAGTTCCTGTTTTAATTTTTTTTTTTTGGAACTGAGAGTTCCTTTTTTTAAATTCCTTAAAGAGGAATAGCTTTTCACTCTCTACTGTACATATTCTTGATTTAATCATGACCATTAGACTAAAATTTTCTAATTCCTTTTTGTTTAATTACATCTAATTGGTGTATCAACTTGATTTGTCTTGTGCTAAATTTTCTCTTCAAGGCCTGCTCTTCTCCTACTTGAACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E719677" ref_strand="+" ref_description="SGN-E719677 [FC08CC04]">
      <seq>ggcgattggcggccaaatcggccgaattggagcggaaacccaaacctaagccagaggatcatcccagatctccaacttcatcgttcaaatcaccctttttttcaacttcgaagtcgaaattgcttccattgaagctccaaaatccatatggtgatggctacaatcatctgtagtattgattgttttggtatcagtaattgactagttactacacagtccgtttccccctcatttttcatcaattctgtttcgttttactttttacacgaacagaaacagttgcaaagtagtggaagaagagagtgatgataatactatggcggcaacgacaaggccgggggttctcaagtccgaagctgtttccaaaggctataatttcgcttctacttgggaacagaatgctctgttaacagagcaacaatcagcagccatacaagcactttcccatgcagttgccgagagacctttcccgtccaatttggaccaagtttctggacatgataacagcctctctgtttcaacaaagcttagttctctagaggattcaggggccattgaagcagtcctagtgaatacaaatcagttttataagtggttcgcggatcttgaagcagccatgaaattagagtctgaagaaaaatatcagcattatgccagcaccttaacagagcagattcagacctgcgatagtatacttcaccaggtggatgaaacacttgacttgttcaatgagttgcaattgcagcatcaagcagtggcaacaaagacaagaactcttcatgatgcgtgcgatagactggtgtgtcaacccatttctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="-" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="77905" stop="69457"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77598" g_stop="77233" g_length="366"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="397" r_length="365" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="77232" i_stop="72103" i_length="5130">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72102" g_stop="72019" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="398" r_stop="481" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72018" i_stop="71935" i_length="84">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71934" g_stop="71833" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="482" r_stop="583" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="71832" i_stop="70227" i_length="1606">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="70226" g_stop="70182" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="584" r_stop="628" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="70181" i_stop="70065" i_length="117">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.847" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="70064" g_stop="69990" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="629" r_stop="703" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="69989" i_stop="69872" i_length="118">
            <donor d_prob="0.914" d_score="1.00"/>
            <acceptor a_prob="0.917" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="69871" g_stop="69757" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="704" r_stop="818" r_length="115" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="-" ref_id="SGN-E719677" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>787</cumulative_length_of_scored_exons>
        <coverage percentage="0.962" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E719677" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77598" e_stop="77233"/>
          <exon e_start="72102" e_stop="72019"/>
          <exon e_start="71934" e_stop="71833"/>
          <exon e_start="70226" e_stop="70182"/>
          <exon e_start="70064" e_stop="69990"/>
          <exon e_start="69871" e_stop="69757"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGAAAACCCAAAGCTAAGCCAGAGGATCATCCCAGATCTCCAACTTCATCGTTCAAATCACCCTTTTTTTCAACTTCGAAGTCGAAATTGCTTCCATTGAAGCTCCAAAATCCATATGGTGATGGCTACAATCATCTGTAGTATTGATTGTTTTGGTATCAGTAATTGACTAGTTACTACACAGTCCGTTTCCCCCTCATTTTTCATCAATTCTGTTTCGTTTTACTTTTTACACGAACAGAAACAGTTGCAAAGTAGTGGAAGAAGAGAGTGATGATAATACTATGGCGGCAACGACAAGGCCGGGGGTTCTCAAGTCCGAAGCTGTTTCCAAAGGCTATAATTTCGCTTCTACTTGGGAACAGGTTCACTCTCTATTTTCTACATTGTTCAGATTTTCTCCAGATTTACTAGATTTGTTTGAACGCATAACCAAAATTATGTAGATATCTGATTCTATGACAAATTTTGATGACCGGATTTTTATCATATGCACTGATCCTGTTGAAATAATGAATAGTAAAGCGGTGATTGGAAAAGGGGATCAAATTACATTGGATTATTGCTTGATTTCTTGGATTCCTTACAGCTTAAGAAAATCCAGCAAATCTTTTAACTATATCTTAGTAATATCTTGGTACTAAGTTTCTCTAATAAATTTTATCACTTACCCAAAAAAGGTGAAAAAAAGGAGGATCAGAATTGTTTCTTTGTGCGATAAAGTTCTCAGTTGATTTTAACATGTGTTTGTCGTCTCATTTCAACGGCAAGGTTTAGCTGCTGGTGATTGTGTCGCATATTCTCCGTTGAACTATCTTTTGAAGTTTTATTTTCATTGTAATGTGACACTGCTTCTCTTTTTCCTCGTATAACCACCGGCTAACTAGCTGCTGAAACTTTTACTTTTAGCTTATTCTTGCAATAGCTATTGGAAAATCACCTTTGAGAGAAATAATGGAGAAAATATTATTGAATTGCTCATCTAAATTGTTACATGAAGACCCTATTTATAGACACTACATTGGAAATCTTTTCTAACTAGAATTCCTATTCTAAGTAAGAAATACTTATTTCTATTCTAACACTCCCCCTCAAGCTGGTGCATACAAATTATATGCACCTAGCTTGTTACAGATGTAATTAATACGAGGACATGTGAGAGACTTAGTGAACATATCCGCAAGCTGATCATTTGACTTCACAAATTTTGTAACAATATCTCCTGAGAGTATCTTTTCTCTGAGAAAGTGACAGTCAATCTCAATGTGCTTAGTCCTTTCATGAAACACTGGATTTGATGCGATATGAAGAGCCGCTTGATTATCACACAAAAGTTCCATCTGATCAATTTTGCCGAATTTTAGTTCTCCCAGTAATTATTTGTGCCAAACTAACTCACAAGTTGCTGTCGCTATTGCTCGATATTCTGATTCTGCACTAGATTGAGAAGCCACATTTTGTTTCTTACTCTTCCACGACACCAAATTACCTCCAACTAAAACACAATATCCGGATGTCAAACGTCTGTTAGAGGGTAATCCTGCCCAATCAGTGTCTGTATATCCAATAATATGCTCATGACCTTGATCCTCAAAGAGTAGTCCTTTGCCGGGGGCTGACTTTATATATCGAAGAATATGAACAACTGCTTCCCAATGACTATCACAAGGGGAAGTCATAAACTGACTTACAACACTCACGGGAAAAGAGATGCCTGGTCTAGTCACTATGAGATAATTCAACTTTCCAACAAGTCGTCTATACCTTTAAGGATTACTAAGTGGCTCCACCTGTCTCGGAAGAAGTTTAACATTCGGATCCATCGGAGTGTCAATAGGTGTACATCCCATCATTCCTGTCTCCTCAAGAATGTCTAAGGCATACTTGTGTTTAGAGATAACAATGCCTGATCTAGATTGAGCAACCTCAATACCTAGAAAATACTTCAATCTACCAAGGTCTTTTGTCTGAAAGTGCTTAAAAAGATGTTGCTTTATATCGGTGATATAGTCTTGATCATTATCAGTGGTAACAATATCATCAACATAAACAACCAAATAGATACATCGACCTGGTGCAGAATGTCGATAAAACACAAAGTGATTTGATCCATTACGAGTCATGCCAAACTTCTGAATTACTGTGCTAAACTTCCCAAACCAAGCTCGAGGAGACTGTTTCAGACCATAGAGTGACCTACGCAATCGACATACAAGGCTACTAGACTCCCCCTGAGCAACAAAACTAGGTGGTTGCTCCATATAGACTTCTTCCTCAAGATCACTAGCAGAAAAGCATTCTTTATGTCCAACTGATAAAGAGGACAATGACGAACAACAACCATAGATTAGAAAAAGACGAACATATGCTATTTTAGCCACAGGAGCAAAAGTGTCACTATAATCTAGCCCAAATATCTGAGTATACCCTTTGGCGACAAGGAGAACCTTAAGTCGATCAACCTAACCATCTAGACCAATTTTGACTGCATAAACCCAATGACAACCAACAGTAGATTTACATGCAGGAAGGGAGACAAGCTCCCAAGTATCACTCTTATGTAAAGCAGACATCTCATCAACCATAGCCTGCCTCCATCTAGAATGAGAAAGTGCTTCACCTATAGTCTTAGGAATGGAAATAGAGGACAATGACGACACAAAGGCATAATGGGTGATGATATATGATGATAACTTAAGAAGGTAAATGCGGGTTAGTATTTCGAGTAGATTGTATACCTTTTTGAAGTGCAAGCGGTGGGCTAGGTAGAGGCAAGTCCGCAGTAGGAGCAGGGTCTGGCGCATGACATGAATCATCTGGGACTAGGGTTGGATGTGGACGACGATGATAAGTTAGTAGTGGTGGCACTGCAACTGGAGATGTAGACGTAACTGTAGATCCCTCAAAGGTTGGCACAGGTAAAATTTGAGGTATGGGTAAGACCATAGAGACATCACTACGATCAGAAGATGTATAATAAGGCTGAGACTCAAAAAATGTAACATCAACAGACATAAGGTATCGGTGAAGAACATGTGAATAACAACGATATCCTTTTTGAACTCTAGAGTAACCAAGAAAGACACATTTGAGGCACGAGGAGCTAATTTATCTTTTCCTGGGGCTAAATTATGAAGAAAGCATGTACTCCAAACGACACGAGAGGGGATAGGATAAAGATGTGACTGAGGAAACAATATGGAATATGGAACATGATTTTGAATATAAGAAGAGGGCATTCTGTTAATTTAATAATAAGCAGAAAGGACTGCATCGCCCCAAAAATGCATCGAAACATGGCAATTCTATGAGGAGAGTGCGAGCAGTCTCTATGAGATATGCCTATTCTTTCTTTCTGCGACACCATTTTGTTGAGGAGTGTATGGACAAGATGTTTGGTGAATGATTCCGTGGTGAGACATAAATTCCTGAAATTGGGGTGATAAGTATACTAAGGCATTATCACTACGGAATGTACGAATAGAAACACCAAACTGATTTTGTATTTCAGCAAAGAAAACTTTGAAAATAGAAAATAACTCAGAACGATCTTTCATTAAGAAAACCCAAGTGCATCTCGAATAATCATCAATGAAACTAACAAAATAACGAAATCCTAAGGGGGAACTGACTCTACTAGTACCCCAAATATTAGAATGAACTAATGAAAAAATAGACTCTGAACGACCCTCAGTACTACGAGAAAATGTAGCACGAGTGTGTTTCCCAAATTGACACGACTCACAATCTAATGTGGATAAACCAGACAAACTAGGTACCATCTTTTTCAATTTGGATAGACTTGAGTGTCCCAAACGTTTGTGAATTAGATCTGAGGAATCTGTAACGGAGCATGCTATTAAAGAATTAGAAGAGGTAAGATAGTAAAGGCCTTGTGATTCATATCTTGTTCCAATAGTCTGTCCTGTACTGCGGTCCTGCATGACAAAGAAATGATCAAAAAAATTATGCTACAATGTAGGGCTTTCGTCAAACGACTAACCGATGCTAGATTAAAAGGAGAACCAGGGACATAAAGAACAGAGTCAAGAGTGACAGAAGATATGGGTTTGGCTTTTCCAACCCCTTTTGGTTTTGTTTGTATCCCATTGGCTAATGTAATAGATGAAAGAGATTATGAATAGATTATATCAGATAAAAGTGATTTATTACCAGTGATATGATCAGAAGCCCCCGATTCTATGACCCATGATCCAATAGTGTTAGACTGTGATATACTAGTACAAAATATTACCCGCAACAGAAACATTAGGTTTTGCAATCGAAACTACTTGTAGAGACGTTTGTTTATTTGCACAATACGGAAAAAACTCTATATATTCCTTTAGAACAACAGGATCATAACTGGGTGATCCACCATGCAAAATAAAACATATGTCACGAGTGTGTCCAGGTTTATGACATGACTACACTTAGATCGAGATTTTTCAAAAAATTCTCTCCCCCGTCTATTCTCCATGGATTTGTATGTACGCTTGGAACTGCCAGAAGCTGCTACACAAGTCTGAAAATATTGGAAGCTGCCGAAATCTGCCCGCAGTGGCCTGAAAAATTCTGATATTGCCGGAATTTTGCTGGGAACTGCCCAAAAAAAATCACCGGAACCCTAATTTCGGTGATCGGATCTAGAGATAACTGTATGGTTCTTACCGAAAACACTGGACGACCCTAACAGAAGAGAGAAACTCGAAAAAAAGAAGAGAGACCCGAGCAGCACTCACGCGCCGGAAGCTGCCCAAAAATCACCGCAACCCTAATTTCGGTGATCGAATCTAAATAAAAATGGTCAAAAACAGTATAGTCTGGGTCGGAATGGCTGGACGACCCCACCTGTCGAAAAAAATCTCAAAGACTATGGACGGAAAAGTCCTCACGCGCCGGCGAGTGAGCCAGATCTCGCCGGAATCTGCCACCTTCGATCGGCGCGTGAGGGCGCGTGCGGTGCTGTTTTCTGGTGGTTCTTGCTGGGGTTTGGTCGCGGGAGGTTTCCTAGCCTCGTGTTGGTGTTGGTTTTCGCACAACACCCACTAAATAAAAAATGATAAAATCAGTCCCAAACGTCACCGGAAATTGAATTGTTTGTTTCTCACCAATGCCCTGATACCATGAGAGAAATAATGGAGAAAATATTATTGAATTGCGCATCTAAATTGTTACATGAAGACCCTATTTATAGACACTACATTGAAAACCTTTTCCAACTAGAATTCCTATTGTAATTCCTATTCTAAGTAAGAAATATTTATTCCTATTCTAACAACCTCTATCCTGGATTTGATCTTCTATTTTGTGTTTGTGGCCCTCATCATGTCAAATTATATTGTTTGTAGTAAAAGAGAAGAATTGTTTGTACGTACTACATGTGTCTATTTCATGTCTATTGAAAGTTATTCCTTTTGATTAATTAAATCAACATTAGTGGCTATCTTAATGTTTATATTCTACAACGACTTGAGCTAGTATTTTTCTTACAGAATGCTCTGTTAACAGAGCAACAATCAGCAGCCATACAAGCACTTTCCCATGCAGTTGCCGAGAGACCTTTCCCGTCCAATTTGGTGAGTTTTTCCTTCTTGGTTGGTTTCAGAATATATCTATCTCTAACTCAATTACCTGAAATATGTTTTTATTTCAATTTCCAGGACCAAGTTTCTGGACATGATAACAGCCTCTCTGTTTCAACAAAGCTTAGTTCTCTAGAGGATTCAGGGGCCATTGAAGCAGTCCTAGTGAATACAAATCAGGTGAGTTACTTTTGAAAGACTGGAGTGGAGTTTCCTTCCAGTTGAGGAGTAGTCTCCATTCTCTTATTTTCTTTGGTGCACACAGGGGGTACCTGGTGTATAGATAATTAGTTGGAGTTCGTAGACAATCATATCTTGTTGTAGATGCTTTGCCTTTTGGTATACGCCTTGTATATGGCCAGTTTGCGAATATGAATGAAAAAATATTTACCTGATTAAAAAAAACCCAATTTTTAGTTGGCATGTCCTTTATCTTTTACATTTCCCGGTTGCAGATCTTAGTATTCCATATTTCAAATAAGGGATCGTGAATGATATTCCCTTATAAAAAAGGTTGCATGATCAACTAAATTTTGGGCAAGGAATCAAAACAAATAAAATCTTGCAACCAATGCTAAATGATAGACTTATATTTCTACAAGACTAGAAGTTGTAGTGTGTTATACTCAAAGGCTCATCTGCCACACATAACTGCTAAACCAGTGAAATCTTCTTTTTGATAAGATAACTGCTAAAATCGATGAGTTGAGCAGAAGGCCTGATAATTGCTTGTTACAAAGCCCCATCCATTGTTTTGGCTTACTAGATAATATGCGTCTCATTTGTTCCGGATGATTGTCATTAACTAGAGAGGGTAAACCTTATGCCGGGCAAAGGATGACTAGAACTTACATTTAGTGAGAAATGACCCTGATACTCAATGTCTTCTGGGGTAGAAATACCTAAATTGCATGTGATGGGTCAAGGGATGATGACCATAGTGGCTGTTTATGGCCTTGATCCTGCCTATTTTAGTGGAGCAGGTTTTGTGTCTATATATCAGAAAGACATGCAAAAGAAATTTCTTCTAGAACTCTCCTCCATATTTGAACTTTGGTAGCCCTAGAAGTTATTTTCTTTTTCTCCTTTTGTTTTATCCTAATGTCTTTTGATAAGGAGATTTTCGGATCATTATGTTATTATATACCTCATCACTAAAAAAGAGTTCTCTGTGAAAGACAACCAACAATTTATACACACAATAAACTTGTAAGTGCACAAAAAATTAACAATAGGAGGTTATTTCTCAACTGTACGAAATCATAATCCACCCCTTTCAAAAGACCTCCTACTTCTCTCCTTCTAAAGAACCACTGGAGCTAACGGAGCTACATCCCATTTCACTTCTTCTCCTCTTTATTGTAAAGCCCCCCACTCCCCCAGCATTTGCATGATTCTTAAATTTCAAAAATGTTAAAAGTAAGTGGTCACAACTGCCAGGCTATTAGGCAGTGTAGTTGGAGTTAATTAACATCCTCAACCCTCATTTCACACATGTAACACTTTTTGCATATATCAGGCAGCTTTCTTGAAGGAATTGCTCTATAAGTACTGCTTCATATGTTGCTGTCCAGCAAAAGCAAGCCACTTAATAAGGAGCTTCAGTTTTCCAAATTTGTTTCCATGTCAATCTTTGTGTTGCCGCCTTGTATATGCTTGAATACTGCATATGCTTAATTGTCTATGTAAATGATGATATTAATGGCATCTTAATTGACCTTTCCCCTTATGCTGCTTGAACTTGATATGAGTTTCCTCTTCCCCTTTGTTTATTTTGTTGATACAGTTTTATAAGTGGTTCGCGGATCTTGAAGCAGCCATGAAATTAGAGGTTGGTCTTTAGCTTGTTTATATGTCTTCCGTTTCTTCCAAAAGTTGTGAGTCATACGTTTCATCTTTTTCACTTGCGGACTAAAAGATATTACATATGCTTTCTTTCTATATATAGTCTGAAGAAAAATATCAGCATTATGCCAGCACCTTAACAGAGCAGATTCAGACCTGCGATAGTATACTTCACCAGGTATTCTGAGAAGAAAAATAATGCTCTTATACTCTTCTCTTAAGCCTTTTGTTGTTGCTGTTCATCTAACTATGCTCGAGTCGACATGCCCTTGCCCTTAAAATTGGCTCTCTTGCAGGTGGATGAAACACTTGACTTGTTCAATGAGTTGCAATTGCAGCATCAAGCAGTGGCAACAAAGACAAGAACTCTTCATGATGCGTGCGATAGACTGGTGTGTCAACCCATTTCTC</genome_strand>
        <mrna_strand>CGG-AAACCCAAACCTAAGCCAGAGGATCATCCCAGATCTCCAACTTCATCGTTCAAATCACCCTTTTTTTCAACTTCGAAGTCGAAATTGCTTCCATTGAAGCTCCAAAATCCATATGGTGATGGCTACAATCATCTGTAGTATTGATTGTTTTGGTATCAGTAATTGACTAGTTACTACACAGTCCGTTTCCCCCTCATTTTTCATCAATTCTGTTTCGTTTTACTTTTTACACGAACAGAAACAGTTGCAAAGTAGTGGAAGAAGAGAGTGATGATAATACTATGGCGGCAACGACAAGGCCGGGGGTTCTCAAGTCCGAAGCTGTTTCCAAAGGCTATAATTTCGCTTCTACTTGGGAACAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCTCTGTTAACAGAGCAACAATCAGCAGCCATACAAGCACTTTCCCATGCAGTTGCCGAGAGACCTTTCCCGTCCAATTTG....................................................................................GACCAAGTTTCTGGACATGATAACAGCCTCTCTGTTTCAACAAAGCTTAGTTCTCTAGAGGATTCAGGGGCCATTGAAGCAGTCCTAGTGAATACAAATCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTATAAGTGGTTCGCGGATCTTGAAGCAGCCATGAAATTAGAG.....................................................................................................................TCTGAAGAAAAATATCAGCATTATGCCAGCACCTTAACAGAGCAGATTCAGACCTGCGATAGTATACTTCACCAG......................................................................................................................GTGGATGAAACACTTGACTTGTTCAATGAGTTGCAATTGCAGCATCAAGCAGTGGCAACAAAGACAAGAACTCTTCATGATGCGTGCGATAGACTGGTGTGTCAACCCATTTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E329746" ref_strand="+" ref_description="SGN-E329746 [cTOD-3-G13]">
      <seq>tgaattttgaagaaaaggaacgtcgttactgtaattttcatatgagcggaaaacccaaagctaagccagaggatcatcccagatctccaacttcatcgttcaaatcaccctttttttcaacttcgaagtcgaaattgcttccattgaagctccaaaatccatatgaaacagttgcaaagtagtggaagaagagagtgatgataatactatggcggcaacgacaaggccgggggttctcaagtccgaagctgtttccaaaggctataatttcgcttctacttgggaacagaatgctctgttaacagagcaacaatcagcagccatacaagcactttcccatgcagttgccgagagacctttcccgtccaatttggaccaagtttctggacatgataacagcctctctgtttcaacaaagcttagttctctagaggattcaggggccattgaagcagtcctagtgaatacaaatcagttttataagtggttcgcggatcttgaagcagccatgaaattagagtctgaagaaaaatatcagcattat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="-" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="77944" stop="69741"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77644" g_stop="77480" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="165" r_length="165" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="77479" i_stop="77357" i_length="123">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.887" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77356" g_stop="77233" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="289" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="77232" i_stop="72103" i_length="5130">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72102" g_stop="72019" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="290" r_stop="373" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="72018" i_stop="71935" i_length="84">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="71934" g_stop="71833" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="374" r_stop="475" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="71832" i_stop="70227" i_length="1606">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="70226" g_stop="70182" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="476" r_stop="520" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="70181" i_stop="70065" i_length="117">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.847" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="70064" g_stop="70041" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="521" r_stop="544" r_length="24" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="-" ref_id="SGN-E329746" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>544</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E329746" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77644" e_stop="77480"/>
          <exon e_start="77356" e_stop="77233"/>
          <exon e_start="72102" e_stop="72019"/>
          <exon e_start="71934" e_stop="71833"/>
          <exon e_start="70226" e_stop="70182"/>
          <exon e_start="70064" e_stop="70041"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAATTTTGAAGAAAAGGAACGTCGTTACTGTAATTTTCATATGAGCGGAAAACCCAAAGCTAAGCCAGAGGATCATCCCAGATCTCCAACTTCATCGTTCAAATCACCCTTTTTTTCAACTTCGAAGTCGAAATTGCTTCCATTGAAGCTCCAAAATCCATATGGTGATGGCTACAATCATCTGTAGTATTGATTGTTTTGGTATCAGTAATTGACTAGTTACTACACAGTCCGTTTCCCCCTCATTTTTCATCAATTCTGTTTCGTTTTACTTTTTACACGAACAGAAACAGTTGCAAAGTAGTGGAAGAAGAGAGTGATGATAATACTATGGCGGCAACGACAAGGCCGGGGGTTCTCAAGTCCGAAGCTGTTTCCAAAGGCTATAATTTCGCTTCTACTTGGGAACAGGTTCACTCTCTATTTTCTACATTGTTCAGATTTTCTCCAGATTTACTAGATTTGTTTGAACGCATAACCAAAATTATGTAGATATCTGATTCTATGACAAATTTTGATGACCGGATTTTTATCATATGCACTGATCCTGTTGAAATAATGAATAGTAAAGCGGTGATTGGAAAAGGGGATCAAATTACATTGGATTATTGCTTGATTTCTTGGATTCCTTACAGCTTAAGAAAATCCAGCAAATCTTTTAACTATATCTTAGTAATATCTTGGTACTAAGTTTCTCTAATAAATTTTATCACTTACCCAAAAAAGGTGAAAAAAAGGAGGATCAGAATTGTTTCTTTGTGCGATAAAGTTCTCAGTTGATTTTAACATGTGTTTGTCGTCTCATTTCAACGGCAAGGTTTAGCTGCTGGTGATTGTGTCGCATATTCTCCGTTGAACTATCTTTTGAAGTTTTATTTTCATTGTAATGTGACACTGCTTCTCTTTTTCCTCGTATAACCACCGGCTAACTAGCTGCTGAAACTTTTACTTTTAGCTTATTCTTGCAATAGCTATTGGAAAATCACCTTTGAGAGAAATAATGGAGAAAATATTATTGAATTGCTCATCTAAATTGTTACATGAAGACCCTATTTATAGACACTACATTGGAAATCTTTTCTAACTAGAATTCCTATTCTAAGTAAGAAATACTTATTTCTATTCTAACACTCCCCCTCAAGCTGGTGCATACAAATTATATGCACCTAGCTTGTTACAGATGTAATTAATACGAGGACATGTGAGAGACTTAGTGAACATATCCGCAAGCTGATCATTTGACTTCACAAATTTTGTAACAATATCTCCTGAGAGTATCTTTTCTCTGAGAAAGTGACAGTCAATCTCAATGTGCTTAGTCCTTTCATGAAACACTGGATTTGATGCGATATGAAGAGCCGCTTGATTATCACACAAAAGTTCCATCTGATCAATTTTGCCGAATTTTAGTTCTCCCAGTAATTATTTGTGCCAAACTAACTCACAAGTTGCTGTCGCTATTGCTCGATATTCTGATTCTGCACTAGATTGAGAAGCCACATTTTGTTTCTTACTCTTCCACGACACCAAATTACCTCCAACTAAAACACAATATCCGGATGTCAAACGTCTGTTAGAGGGTAATCCTGCCCAATCAGTGTCTGTATATCCAATAATATGCTCATGACCTTGATCCTCAAAGAGTAGTCCTTTGCCGGGGGCTGACTTTATATATCGAAGAATATGAACAACTGCTTCCCAATGACTATCACAAGGGGAAGTCATAAACTGACTTACAACACTCACGGGAAAAGAGATGCCTGGTCTAGTCACTATGAGATAATTCAACTTTCCAACAAGTCGTCTATACCTTTAAGGATTACTAAGTGGCTCCACCTGTCTCGGAAGAAGTTTAACATTCGGATCCATCGGAGTGTCAATAGGTGTACATCCCATCATTCCTGTCTCCTCAAGAATGTCTAAGGCATACTTGTGTTTAGAGATAACAATGCCTGATCTAGATTGAGCAACCTCAATACCTAGAAAATACTTCAATCTACCAAGGTCTTTTGTCTGAAAGTGCTTAAAAAGATGTTGCTTTATATCGGTGATATAGTCTTGATCATTATCAGTGGTAACAATATCATCAACATAAACAACCAAATAGATACATCGACCTGGTGCAGAATGTCGATAAAACACAAAGTGATTTGATCCATTACGAGTCATGCCAAACTTCTGAATTACTGTGCTAAACTTCCCAAACCAAGCTCGAGGAGACTGTTTCAGACCATAGAGTGACCTACGCAATCGACATACAAGGCTACTAGACTCCCCCTGAGCAACAAAACTAGGTGGTTGCTCCATATAGACTTCTTCCTCAAGATCACTAGCAGAAAAGCATTCTTTATGTCCAACTGATAAAGAGGACAATGACGAACAACAACCATAGATTAGAAAAAGACGAACATATGCTATTTTAGCCACAGGAGCAAAAGTGTCACTATAATCTAGCCCAAATATCTGAGTATACCCTTTGGCGACAAGGAGAACCTTAAGTCGATCAACCTAACCATCTAGACCAATTTTGACTGCATAAACCCAATGACAACCAACAGTAGATTTACATGCAGGAAGGGAGACAAGCTCCCAAGTATCACTCTTATGTAAAGCAGACATCTCATCAACCATAGCCTGCCTCCATCTAGAATGAGAAAGTGCTTCACCTATAGTCTTAGGAATGGAAATAGAGGACAATGACGACACAAAGGCATAATGGGTGATGATATATGATGATAACTTAAGAAGGTAAATGCGGGTTAGTATTTCGAGTAGATTGTATACCTTTTTGAAGTGCAAGCGGTGGGCTAGGTAGAGGCAAGTCCGCAGTAGGAGCAGGGTCTGGCGCATGACATGAATCATCTGGGACTAGGGTTGGATGTGGACGACGATGATAAGTTAGTAGTGGTGGCACTGCAACTGGAGATGTAGACGTAACTGTAGATCCCTCAAAGGTTGGCACAGGTAAAATTTGAGGTATGGGTAAGACCATAGAGACATCACTACGATCAGAAGATGTATAATAAGGCTGAGACTCAAAAAATGTAACATCAACAGACATAAGGTATCGGTGAAGAACATGTGAATAACAACGATATCCTTTTTGAACTCTAGAGTAACCAAGAAAGACACATTTGAGGCACGAGGAGCTAATTTATCTTTTCCTGGGGCTAAATTATGAAGAAAGCATGTACTCCAAACGACACGAGAGGGGATAGGATAAAGATGTGACTGAGGAAACAATATGGAATATGGAACATGATTTTGAATATAAGAAGAGGGCATTCTGTTAATTTAATAATAAGCAGAAAGGACTGCATCGCCCCAAAAATGCATCGAAACATGGCAATTCTATGAGGAGAGTGCGAGCAGTCTCTATGAGATATGCCTATTCTTTCTTTCTGCGACACCATTTTGTTGAGGAGTGTATGGACAAGATGTTTGGTGAATGATTCCGTGGTGAGACATAAATTCCTGAAATTGGGGTGATAAGTATACTAAGGCATTATCACTACGGAATGTACGAATAGAAACACCAAACTGATTTTGTATTTCAGCAAAGAAAACTTTGAAAATAGAAAATAACTCAGAACGATCTTTCATTAAGAAAACCCAAGTGCATCTCGAATAATCATCAATGAAACTAACAAAATAACGAAATCCTAAGGGGGAACTGACTCTACTAGTACCCCAAATATTAGAATGAACTAATGAAAAAATAGACTCTGAACGACCCTCAGTACTACGAGAAAATGTAGCACGAGTGTGTTTCCCAAATTGACACGACTCACAATCTAATGTGGATAAACCAGACAAACTAGGTACCATCTTTTTCAATTTGGATAGACTTGAGTGTCCCAAACGTTTGTGAATTAGATCTGAGGAATCTGTAACGGAGCATGCTATTAAAGAATTAGAAGAGGTAAGATAGTAAAGGCCTTGTGATTCATATCTTGTTCCAATAGTCTGTCCTGTACTGCGGTCCTGCATGACAAAGAAATGATCAAAAAAATTATGCTACAATGTAGGGCTTTCGTCAAACGACTAACCGATGCTAGATTAAAAGGAGAACCAGGGACATAAAGAACAGAGTCAAGAGTGACAGAAGATATGGGTTTGGCTTTTCCAACCCCTTTTGGTTTTGTTTGTATCCCATTGGCTAATGTAATAGATGAAAGAGATTATGAATAGATTATATCAGATAAAAGTGATTTATTACCAGTGATATGATCAGAAGCCCCCGATTCTATGACCCATGATCCAATAGTGTTAGACTGTGATATACTAGTACAAAATATTACCCGCAACAGAAACATTAGGTTTTGCAATCGAAACTACTTGTAGAGACGTTTGTTTATTTGCACAATACGGAAAAAACTCTATATATTCCTTTAGAACAACAGGATCATAACTGGGTGATCCACCATGCAAAATAAAACATATGTCACGAGTGTGTCCAGGTTTATGACATGACTACACTTAGATCGAGATTTTTCAAAAAATTCTCTCCCCCGTCTATTCTCCATGGATTTGTATGTACGCTTGGAACTGCCAGAAGCTGCTACACAAGTCTGAAAATATTGGAAGCTGCCGAAATCTGCCCGCAGTGGCCTGAAAAATTCTGATATTGCCGGAATTTTGCTGGGAACTGCCCAAAAAAAATCACCGGAACCCTAATTTCGGTGATCGGATCTAGAGATAACTGTATGGTTCTTACCGAAAACACTGGACGACCCTAACAGAAGAGAGAAACTCGAAAAAAAGAAGAGAGACCCGAGCAGCACTCACGCGCCGGAAGCTGCCCAAAAATCACCGCAACCCTAATTTCGGTGATCGAATCTAAATAAAAATGGTCAAAAACAGTATAGTCTGGGTCGGAATGGCTGGACGACCCCACCTGTCGAAAAAAATCTCAAAGACTATGGACGGAAAAGTCCTCACGCGCCGGCGAGTGAGCCAGATCTCGCCGGAATCTGCCACCTTCGATCGGCGCGTGAGGGCGCGTGCGGTGCTGTTTTCTGGTGGTTCTTGCTGGGGTTTGGTCGCGGGAGGTTTCCTAGCCTCGTGTTGGTGTTGGTTTTCGCACAACACCCACTAAATAAAAAATGATAAAATCAGTCCCAAACGTCACCGGAAATTGAATTGTTTGTTTCTCACCAATGCCCTGATACCATGAGAGAAATAATGGAGAAAATATTATTGAATTGCGCATCTAAATTGTTACATGAAGACCCTATTTATAGACACTACATTGAAAACCTTTTCCAACTAGAATTCCTATTGTAATTCCTATTCTAAGTAAGAAATATTTATTCCTATTCTAACAACCTCTATCCTGGATTTGATCTTCTATTTTGTGTTTGTGGCCCTCATCATGTCAAATTATATTGTTTGTAGTAAAAGAGAAGAATTGTTTGTACGTACTACATGTGTCTATTTCATGTCTATTGAAAGTTATTCCTTTTGATTAATTAAATCAACATTAGTGGCTATCTTAATGTTTATATTCTACAACGACTTGAGCTAGTATTTTTCTTACAGAATGCTCTGTTAACAGAGCAACAATCAGCAGCCATACAAGCACTTTCCCATGCAGTTGCCGAGAGACCTTTCCCGTCCAATTTGGTGAGTTTTTCCTTCTTGGTTGGTTTCAGAATATATCTATCTCTAACTCAATTACCTGAAATATGTTTTTATTTCAATTTCCAGGACCAAGTTTCTGGACATGATAACAGCCTCTCTGTTTCAACAAAGCTTAGTTCTCTAGAGGATTCAGGGGCCATTGAAGCAGTCCTAGTGAATACAAATCAGGTGAGTTACTTTTGAAAGACTGGAGTGGAGTTTCCTTCCAGTTGAGGAGTAGTCTCCATTCTCTTATTTTCTTTGGTGCACACAGGGGGTACCTGGTGTATAGATAATTAGTTGGAGTTCGTAGACAATCATATCTTGTTGTAGATGCTTTGCCTTTTGGTATACGCCTTGTATATGGCCAGTTTGCGAATATGAATGAAAAAATATTTACCTGATTAAAAAAAACCCAATTTTTAGTTGGCATGTCCTTTATCTTTTACATTTCCCGGTTGCAGATCTTAGTATTCCATATTTCAAATAAGGGATCGTGAATGATATTCCCTTATAAAAAAGGTTGCATGATCAACTAAATTTTGGGCAAGGAATCAAAACAAATAAAATCTTGCAACCAATGCTAAATGATAGACTTATATTTCTACAAGACTAGAAGTTGTAGTGTGTTATACTCAAAGGCTCATCTGCCACACATAACTGCTAAACCAGTGAAATCTTCTTTTTGATAAGATAACTGCTAAAATCGATGAGTTGAGCAGAAGGCCTGATAATTGCTTGTTACAAAGCCCCATCCATTGTTTTGGCTTACTAGATAATATGCGTCTCATTTGTTCCGGATGATTGTCATTAACTAGAGAGGGTAAACCTTATGCCGGGCAAAGGATGACTAGAACTTACATTTAGTGAGAAATGACCCTGATACTCAATGTCTTCTGGGGTAGAAATACCTAAATTGCATGTGATGGGTCAAGGGATGATGACCATAGTGGCTGTTTATGGCCTTGATCCTGCCTATTTTAGTGGAGCAGGTTTTGTGTCTATATATCAGAAAGACATGCAAAAGAAATTTCTTCTAGAACTCTCCTCCATATTTGAACTTTGGTAGCCCTAGAAGTTATTTTCTTTTTCTCCTTTTGTTTTATCCTAATGTCTTTTGATAAGGAGATTTTCGGATCATTATGTTATTATATACCTCATCACTAAAAAAGAGTTCTCTGTGAAAGACAACCAACAATTTATACACACAATAAACTTGTAAGTGCACAAAAAATTAACAATAGGAGGTTATTTCTCAACTGTACGAAATCATAATCCACCCCTTTCAAAAGACCTCCTACTTCTCTCCTTCTAAAGAACCACTGGAGCTAACGGAGCTACATCCCATTTCACTTCTTCTCCTCTTTATTGTAAAGCCCCCCACTCCCCCAGCATTTGCATGATTCTTAAATTTCAAAAATGTTAAAAGTAAGTGGTCACAACTGCCAGGCTATTAGGCAGTGTAGTTGGAGTTAATTAACATCCTCAACCCTCATTTCACACATGTAACACTTTTTGCATATATCAGGCAGCTTTCTTGAAGGAATTGCTCTATAAGTACTGCTTCATATGTTGCTGTCCAGCAAAAGCAAGCCACTTAATAAGGAGCTTCAGTTTTCCAAATTTGTTTCCATGTCAATCTTTGTGTTGCCGCCTTGTATATGCTTGAATACTGCATATGCTTAATTGTCTATGTAAATGATGATATTAATGGCATCTTAATTGACCTTTCCCCTTATGCTGCTTGAACTTGATATGAGTTTCCTCTTCCCCTTTGTTTATTTTGTTGATACAGTTTTATAAGTGGTTCGCGGATCTTGAAGCAGCCATGAAATTAGAGGTTGGTCTTTAGCTTGTTTATATGTCTTCCGTTTCTTCCAAAAGTTGTGAGTCATACGTTTCATCTTTTTCACTTGCGGACTAAAAGATATTACATATGCTTTCTTTCTATATATAGTCTGAAGAAAAATATCAGCATTAT</genome_strand>
        <mrna_strand>TGAATTTTGAAGAAAAGGAACGTCGTTACTGTAATTTTCATATGAGCGGAAAACCCAAAGCTAAGCCAGAGGATCATCCCAGATCTCCAACTTCATCGTTCAAATCACCCTTTTTTTCAACTTCGAAGTCGAAATTGCTTCCATTGAAGCTCCAAAATCCATATG...........................................................................................................................AAACAGTTGCAAAGTAGTGGAAGAAGAGAGTGATGATAATACTATGGCGGCAACGACAAGGCCGGGGGTTCTCAAGTCCGAAGCTGTTTCCAAAGGCTATAATTTCGCTTCTACTTGGGAACAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCTCTGTTAACAGAGCAACAATCAGCAGCCATACAAGCACTTTCCCATGCAGTTGCCGAGAGACCTTTCCCGTCCAATTTG....................................................................................GACCAAGTTTCTGGACATGATAACAGCCTCTCTGTTTCAACAAAGCTTAGTTCTCTAGAGGATTCAGGGGCCATTGAAGCAGTCCTAGTGAATACAAATCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTATAAGTGGTTCGCGGATCTTGAAGCAGCCATGAAATTAGAG.....................................................................................................................TCTGAAGAAAAATATCAGCATTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E330382" ref_strand="+" ref_description="SGN-E330382 [cTOD-4-K3]">
      <seq>ccaaagctaagccagaggatcatcccagatctccaacttcatcgttcaaatcaccctttttttcaacttcgaagtcgaaattgcttccattgaagctccaaaatccatatggtgatggctacaatcatctgtagtattgattgttttggtatcagtgattgactagttactacacagtccgtttccccctcatttttcatcaattctgtttcgttttactttttacacgaacagaaacagttgcaaagtagtggaagaagagagtgatgataatactatggcggcaacgacaaggccgggggttctcaagtccgaagctgtttccaaaggctataatttcgcttctacttgggaacagaatgctctgttaacagagcaacaatcagcagccatacaagcactttcccatgcagttgccgagagacctttcccgtccaatttggaccaagtttctggacatgataacagcctctctgtttcaacaaagcttagttctctagaggattcaagggccattgaagcagtcctagtgaatacaaatcagttttataagtgggttcgcggatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="-" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="77890" stop="71531"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77590" g_stop="77233" g_length="358"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="358" r_length="358" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="77232" i_stop="72103" i_length="5130">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72102" g_stop="72019" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="359" r_stop="442" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72018" i_stop="71935" i_length="84">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71934" g_stop="71833" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="544" r_length="102" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="-" ref_id="SGN-E330382" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>544</cumulative_length_of_scored_exons>
        <coverage percentage="0.958" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E330382" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77590" e_stop="77233"/>
          <exon e_start="72102" e_stop="72019"/>
          <exon e_start="71934" e_stop="71833"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAAGCTAAGCCAGAGGATCATCCCAGATCTCCAACTTCATCGTTCAAATCACCCTTTTTTTCAACTTCGAAGTCGAAATTGCTTCCATTGAAGCTCCAAAATCCATATGGTGATGGCTACAATCATCTGTAGTATTGATTGTTTTGGTATCAGTAATTGACTAGTTACTACACAGTCCGTTTCCCCCTCATTTTTCATCAATTCTGTTTCGTTTTACTTTTTACACGAACAGAAACAGTTGCAAAGTAGTGGAAGAAGAGAGTGATGATAATACTATGGCGGCAACGACAAGGCCGGGGGTTCTCAAGTCCGAAGCTGTTTCCAAAGGCTATAATTTCGCTTCTACTTGGGAACAGGTTCACTCTCTATTTTCTACATTGTTCAGATTTTCTCCAGATTTACTAGATTTGTTTGAACGCATAACCAAAATTATGTAGATATCTGATTCTATGACAAATTTTGATGACCGGATTTTTATCATATGCACTGATCCTGTTGAAATAATGAATAGTAAAGCGGTGATTGGAAAAGGGGATCAAATTACATTGGATTATTGCTTGATTTCTTGGATTCCTTACAGCTTAAGAAAATCCAGCAAATCTTTTAACTATATCTTAGTAATATCTTGGTACTAAGTTTCTCTAATAAATTTTATCACTTACCCAAAAAAGGTGAAAAAAAGGAGGATCAGAATTGTTTCTTTGTGCGATAAAGTTCTCAGTTGATTTTAACATGTGTTTGTCGTCTCATTTCAACGGCAAGGTTTAGCTGCTGGTGATTGTGTCGCATATTCTCCGTTGAACTATCTTTTGAAGTTTTATTTTCATTGTAATGTGACACTGCTTCTCTTTTTCCTCGTATAACCACCGGCTAACTAGCTGCTGAAACTTTTACTTTTAGCTTATTCTTGCAATAGCTATTGGAAAATCACCTTTGAGAGAAATAATGGAGAAAATATTATTGAATTGCTCATCTAAATTGTTACATGAAGACCCTATTTATAGACACTACATTGGAAATCTTTTCTAACTAGAATTCCTATTCTAAGTAAGAAATACTTATTTCTATTCTAACACTCCCCCTCAAGCTGGTGCATACAAATTATATGCACCTAGCTTGTTACAGATGTAATTAATACGAGGACATGTGAGAGACTTAGTGAACATATCCGCAAGCTGATCATTTGACTTCACAAATTTTGTAACAATATCTCCTGAGAGTATCTTTTCTCTGAGAAAGTGACAGTCAATCTCAATGTGCTTAGTCCTTTCATGAAACACTGGATTTGATGCGATATGAAGAGCCGCTTGATTATCACACAAAAGTTCCATCTGATCAATTTTGCCGAATTTTAGTTCTCCCAGTAATTATTTGTGCCAAACTAACTCACAAGTTGCTGTCGCTATTGCTCGATATTCTGATTCTGCACTAGATTGAGAAGCCACATTTTGTTTCTTACTCTTCCACGACACCAAATTACCTCCAACTAAAACACAATATCCGGATGTCAAACGTCTGTTAGAGGGTAATCCTGCCCAATCAGTGTCTGTATATCCAATAATATGCTCATGACCTTGATCCTCAAAGAGTAGTCCTTTGCCGGGGGCTGACTTTATATATCGAAGAATATGAACAACTGCTTCCCAATGACTATCACAAGGGGAAGTCATAAACTGACTTACAACACTCACGGGAAAAGAGATGCCTGGTCTAGTCACTATGAGATAATTCAACTTTCCAACAAGTCGTCTATACCTTTAAGGATTACTAAGTGGCTCCACCTGTCTCGGAAGAAGTTTAACATTCGGATCCATCGGAGTGTCAATAGGTGTACATCCCATCATTCCTGTCTCCTCAAGAATGTCTAAGGCATACTTGTGTTTAGAGATAACAATGCCTGATCTAGATTGAGCAACCTCAATACCTAGAAAATACTTCAATCTACCAAGGTCTTTTGTCTGAAAGTGCTTAAAAAGATGTTGCTTTATATCGGTGATATAGTCTTGATCATTATCAGTGGTAACAATATCATCAACATAAACAACCAAATAGATACATCGACCTGGTGCAGAATGTCGATAAAACACAAAGTGATTTGATCCATTACGAGTCATGCCAAACTTCTGAATTACTGTGCTAAACTTCCCAAACCAAGCTCGAGGAGACTGTTTCAGACCATAGAGTGACCTACGCAATCGACATACAAGGCTACTAGACTCCCCCTGAGCAACAAAACTAGGTGGTTGCTCCATATAGACTTCTTCCTCAAGATCACTAGCAGAAAAGCATTCTTTATGTCCAACTGATAAAGAGGACAATGACGAACAACAACCATAGATTAGAAAAAGACGAACATATGCTATTTTAGCCACAGGAGCAAAAGTGTCACTATAATCTAGCCCAAATATCTGAGTATACCCTTTGGCGACAAGGAGAACCTTAAGTCGATCAACCTAACCATCTAGACCAATTTTGACTGCATAAACCCAATGACAACCAACAGTAGATTTACATGCAGGAAGGGAGACAAGCTCCCAAGTATCACTCTTATGTAAAGCAGACATCTCATCAACCATAGCCTGCCTCCATCTAGAATGAGAAAGTGCTTCACCTATAGTCTTAGGAATGGAAATAGAGGACAATGACGACACAAAGGCATAATGGGTGATGATATATGATGATAACTTAAGAAGGTAAATGCGGGTTAGTATTTCGAGTAGATTGTATACCTTTTTGAAGTGCAAGCGGTGGGCTAGGTAGAGGCAAGTCCGCAGTAGGAGCAGGGTCTGGCGCATGACATGAATCATCTGGGACTAGGGTTGGATGTGGACGACGATGATAAGTTAGTAGTGGTGGCACTGCAACTGGAGATGTAGACGTAACTGTAGATCCCTCAAAGGTTGGCACAGGTAAAATTTGAGGTATGGGTAAGACCATAGAGACATCACTACGATCAGAAGATGTATAATAAGGCTGAGACTCAAAAAATGTAACATCAACAGACATAAGGTATCGGTGAAGAACATGTGAATAACAACGATATCCTTTTTGAACTCTAGAGTAACCAAGAAAGACACATTTGAGGCACGAGGAGCTAATTTATCTTTTCCTGGGGCTAAATTATGAAGAAAGCATGTACTCCAAACGACACGAGAGGGGATAGGATAAAGATGTGACTGAGGAAACAATATGGAATATGGAACATGATTTTGAATATAAGAAGAGGGCATTCTGTTAATTTAATAATAAGCAGAAAGGACTGCATCGCCCCAAAAATGCATCGAAACATGGCAATTCTATGAGGAGAGTGCGAGCAGTCTCTATGAGATATGCCTATTCTTTCTTTCTGCGACACCATTTTGTTGAGGAGTGTATGGACAAGATGTTTGGTGAATGATTCCGTGGTGAGACATAAATTCCTGAAATTGGGGTGATAAGTATACTAAGGCATTATCACTACGGAATGTACGAATAGAAACACCAAACTGATTTTGTATTTCAGCAAAGAAAACTTTGAAAATAGAAAATAACTCAGAACGATCTTTCATTAAGAAAACCCAAGTGCATCTCGAATAATCATCAATGAAACTAACAAAATAACGAAATCCTAAGGGGGAACTGACTCTACTAGTACCCCAAATATTAGAATGAACTAATGAAAAAATAGACTCTGAACGACCCTCAGTACTACGAGAAAATGTAGCACGAGTGTGTTTCCCAAATTGACACGACTCACAATCTAATGTGGATAAACCAGACAAACTAGGTACCATCTTTTTCAATTTGGATAGACTTGAGTGTCCCAAACGTTTGTGAATTAGATCTGAGGAATCTGTAACGGAGCATGCTATTAAAGAATTAGAAGAGGTAAGATAGTAAAGGCCTTGTGATTCATATCTTGTTCCAATAGTCTGTCCTGTACTGCGGTCCTGCATGACAAAGAAATGATCAAAAAAATTATGCTACAATGTAGGGCTTTCGTCAAACGACTAACCGATGCTAGATTAAAAGGAGAACCAGGGACATAAAGAACAGAGTCAAGAGTGACAGAAGATATGGGTTTGGCTTTTCCAACCCCTTTTGGTTTTGTTTGTATCCCATTGGCTAATGTAATAGATGAAAGAGATTATGAATAGATTATATCAGATAAAAGTGATTTATTACCAGTGATATGATCAGAAGCCCCCGATTCTATGACCCATGATCCAATAGTGTTAGACTGTGATATACTAGTACAAAATATTACCCGCAACAGAAACATTAGGTTTTGCAATCGAAACTACTTGTAGAGACGTTTGTTTATTTGCACAATACGGAAAAAACTCTATATATTCCTTTAGAACAACAGGATCATAACTGGGTGATCCACCATGCAAAATAAAACATATGTCACGAGTGTGTCCAGGTTTATGACATGACTACACTTAGATCGAGATTTTTCAAAAAATTCTCTCCCCCGTCTATTCTCCATGGATTTGTATGTACGCTTGGAACTGCCAGAAGCTGCTACACAAGTCTGAAAATATTGGAAGCTGCCGAAATCTGCCCGCAGTGGCCTGAAAAATTCTGATATTGCCGGAATTTTGCTGGGAACTGCCCAAAAAAAATCACCGGAACCCTAATTTCGGTGATCGGATCTAGAGATAACTGTATGGTTCTTACCGAAAACACTGGACGACCCTAACAGAAGAGAGAAACTCGAAAAAAAGAAGAGAGACCCGAGCAGCACTCACGCGCCGGAAGCTGCCCAAAAATCACCGCAACCCTAATTTCGGTGATCGAATCTAAATAAAAATGGTCAAAAACAGTATAGTCTGGGTCGGAATGGCTGGACGACCCCACCTGTCGAAAAAAATCTCAAAGACTATGGACGGAAAAGTCCTCACGCGCCGGCGAGTGAGCCAGATCTCGCCGGAATCTGCCACCTTCGATCGGCGCGTGAGGGCGCGTGCGGTGCTGTTTTCTGGTGGTTCTTGCTGGGGTTTGGTCGCGGGAGGTTTCCTAGCCTCGTGTTGGTGTTGGTTTTCGCACAACACCCACTAAATAAAAAATGATAAAATCAGTCCCAAACGTCACCGGAAATTGAATTGTTTGTTTCTCACCAATGCCCTGATACCATGAGAGAAATAATGGAGAAAATATTATTGAATTGCGCATCTAAATTGTTACATGAAGACCCTATTTATAGACACTACATTGAAAACCTTTTCCAACTAGAATTCCTATTGTAATTCCTATTCTAAGTAAGAAATATTTATTCCTATTCTAACAACCTCTATCCTGGATTTGATCTTCTATTTTGTGTTTGTGGCCCTCATCATGTCAAATTATATTGTTTGTAGTAAAAGAGAAGAATTGTTTGTACGTACTACATGTGTCTATTTCATGTCTATTGAAAGTTATTCCTTTTGATTAATTAAATCAACATTAGTGGCTATCTTAATGTTTATATTCTACAACGACTTGAGCTAGTATTTTTCTTACAGAATGCTCTGTTAACAGAGCAACAATCAGCAGCCATACAAGCACTTTCCCATGCAGTTGCCGAGAGACCTTTCCCGTCCAATTTGGTGAGTTTTTCCTTCTTGGTTGGTTTCAGAATATATCTATCTCTAACTCAATTACCTGAAATATGTTTTTATTTCAATTTCCAGGACCAAGTTTCTGGACATGATAACAGCCTCTCTGTTTCAACAAAGCTTAGTTCTCTAGAGGATTCAGGGGCCATTGAAGCAGTCCTAGTGAATACAAATCAG</genome_strand>
        <mrna_strand>CCAAAGCTAAGCCAGAGGATCATCCCAGATCTCCAACTTCATCGTTCAAATCACCCTTTTTTTCAACTTCGAAGTCGAAATTGCTTCCATTGAAGCTCCAAAATCCATATGGTGATGGCTACAATCATCTGTAGTATTGATTGTTTTGGTATCAGTGATTGACTAGTTACTACACAGTCCGTTTCCCCCTCATTTTTCATCAATTCTGTTTCGTTTTACTTTTTACACGAACAGAAACAGTTGCAAAGTAGTGGAAGAAGAGAGTGATGATAATACTATGGCGGCAACGACAAGGCCGGGGGTTCTCAAGTCCGAAGCTGTTTCCAAAGGCTATAATTTCGCTTCTACTTGGGAACAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCTCTGTTAACAGAGCAACAATCAGCAGCCATACAAGCACTTTCCCATGCAGTTGCCGAGAGACCTTTCCCGTCCAATTTG....................................................................................GACCAAGTTTCTGGACATGATAACAGCCTCTCTGTTTCAACAAAGCTTAGTTCTCTAGAGGATTCAAGGGCCATTGAAGCAGTCCTAGTGAATACAAATCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E394131" ref_strand="+" ref_description="SGN-E394131 [TUS-40-N13]">
      <seq>cccaaagctaagccagaggatcatcccagatctccaacttcatcgttcaaatcaccctttttttcaacttcgaagtcgaaattgcttccattgaagctccaaaatccatatggtgatggctacaatcatctgtagtattgattgttttggtatcagtgattgactagttactacacagtccgtttccccctcatttttcatcaattctgtttcgttttactttttacacgaacagaaacagttgcaaagtagtggaagaagagagtgatgataatactatggcggcaacgagaaggccgggggttctcaagtccgaagctgtttccaaaggctataatttcgcttctacttgggaacagaatgctctgttaacagagcaacaatcagcagccatacaagcactttcccatgcagttgccgagagacctttcccgtccaatttggacgaagtttctggacatgataacagcctctctgtttcaacaaagcttagttctctagagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="-" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="77891" stop="71574"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77591" g_stop="77233" g_length="359"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="359" r_length="359" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="77232" i_stop="72103" i_length="5130">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72102" g_stop="72019" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="360" r_stop="443" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72018" i_stop="71935" i_length="84">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71934" g_stop="71874" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="504" r_length="61" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="-" ref_id="SGN-E394131" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>504</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E394131" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77591" e_stop="77233"/>
          <exon e_start="72102" e_stop="72019"/>
          <exon e_start="71934" e_stop="71874"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCAAAGCTAAGCCAGAGGATCATCCCAGATCTCCAACTTCATCGTTCAAATCACCCTTTTTTTCAACTTCGAAGTCGAAATTGCTTCCATTGAAGCTCCAAAATCCATATGGTGATGGCTACAATCATCTGTAGTATTGATTGTTTTGGTATCAGTAATTGACTAGTTACTACACAGTCCGTTTCCCCCTCATTTTTCATCAATTCTGTTTCGTTTTACTTTTTACACGAACAGAAACAGTTGCAAAGTAGTGGAAGAAGAGAGTGATGATAATACTATGGCGGCAACGACAAGGCCGGGGGTTCTCAAGTCCGAAGCTGTTTCCAAAGGCTATAATTTCGCTTCTACTTGGGAACAGGTTCACTCTCTATTTTCTACATTGTTCAGATTTTCTCCAGATTTACTAGATTTGTTTGAACGCATAACCAAAATTATGTAGATATCTGATTCTATGACAAATTTTGATGACCGGATTTTTATCATATGCACTGATCCTGTTGAAATAATGAATAGTAAAGCGGTGATTGGAAAAGGGGATCAAATTACATTGGATTATTGCTTGATTTCTTGGATTCCTTACAGCTTAAGAAAATCCAGCAAATCTTTTAACTATATCTTAGTAATATCTTGGTACTAAGTTTCTCTAATAAATTTTATCACTTACCCAAAAAAGGTGAAAAAAAGGAGGATCAGAATTGTTTCTTTGTGCGATAAAGTTCTCAGTTGATTTTAACATGTGTTTGTCGTCTCATTTCAACGGCAAGGTTTAGCTGCTGGTGATTGTGTCGCATATTCTCCGTTGAACTATCTTTTGAAGTTTTATTTTCATTGTAATGTGACACTGCTTCTCTTTTTCCTCGTATAACCACCGGCTAACTAGCTGCTGAAACTTTTACTTTTAGCTTATTCTTGCAATAGCTATTGGAAAATCACCTTTGAGAGAAATAATGGAGAAAATATTATTGAATTGCTCATCTAAATTGTTACATGAAGACCCTATTTATAGACACTACATTGGAAATCTTTTCTAACTAGAATTCCTATTCTAAGTAAGAAATACTTATTTCTATTCTAACACTCCCCCTCAAGCTGGTGCATACAAATTATATGCACCTAGCTTGTTACAGATGTAATTAATACGAGGACATGTGAGAGACTTAGTGAACATATCCGCAAGCTGATCATTTGACTTCACAAATTTTGTAACAATATCTCCTGAGAGTATCTTTTCTCTGAGAAAGTGACAGTCAATCTCAATGTGCTTAGTCCTTTCATGAAACACTGGATTTGATGCGATATGAAGAGCCGCTTGATTATCACACAAAAGTTCCATCTGATCAATTTTGCCGAATTTTAGTTCTCCCAGTAATTATTTGTGCCAAACTAACTCACAAGTTGCTGTCGCTATTGCTCGATATTCTGATTCTGCACTAGATTGAGAAGCCACATTTTGTTTCTTACTCTTCCACGACACCAAATTACCTCCAACTAAAACACAATATCCGGATGTCAAACGTCTGTTAGAGGGTAATCCTGCCCAATCAGTGTCTGTATATCCAATAATATGCTCATGACCTTGATCCTCAAAGAGTAGTCCTTTGCCGGGGGCTGACTTTATATATCGAAGAATATGAACAACTGCTTCCCAATGACTATCACAAGGGGAAGTCATAAACTGACTTACAACACTCACGGGAAAAGAGATGCCTGGTCTAGTCACTATGAGATAATTCAACTTTCCAACAAGTCGTCTATACCTTTAAGGATTACTAAGTGGCTCCACCTGTCTCGGAAGAAGTTTAACATTCGGATCCATCGGAGTGTCAATAGGTGTACATCCCATCATTCCTGTCTCCTCAAGAATGTCTAAGGCATACTTGTGTTTAGAGATAACAATGCCTGATCTAGATTGAGCAACCTCAATACCTAGAAAATACTTCAATCTACCAAGGTCTTTTGTCTGAAAGTGCTTAAAAAGATGTTGCTTTATATCGGTGATATAGTCTTGATCATTATCAGTGGTAACAATATCATCAACATAAACAACCAAATAGATACATCGACCTGGTGCAGAATGTCGATAAAACACAAAGTGATTTGATCCATTACGAGTCATGCCAAACTTCTGAATTACTGTGCTAAACTTCCCAAACCAAGCTCGAGGAGACTGTTTCAGACCATAGAGTGACCTACGCAATCGACATACAAGGCTACTAGACTCCCCCTGAGCAACAAAACTAGGTGGTTGCTCCATATAGACTTCTTCCTCAAGATCACTAGCAGAAAAGCATTCTTTATGTCCAACTGATAAAGAGGACAATGACGAACAACAACCATAGATTAGAAAAAGACGAACATATGCTATTTTAGCCACAGGAGCAAAAGTGTCACTATAATCTAGCCCAAATATCTGAGTATACCCTTTGGCGACAAGGAGAACCTTAAGTCGATCAACCTAACCATCTAGACCAATTTTGACTGCATAAACCCAATGACAACCAACAGTAGATTTACATGCAGGAAGGGAGACAAGCTCCCAAGTATCACTCTTATGTAAAGCAGACATCTCATCAACCATAGCCTGCCTCCATCTAGAATGAGAAAGTGCTTCACCTATAGTCTTAGGAATGGAAATAGAGGACAATGACGACACAAAGGCATAATGGGTGATGATATATGATGATAACTTAAGAAGGTAAATGCGGGTTAGTATTTCGAGTAGATTGTATACCTTTTTGAAGTGCAAGCGGTGGGCTAGGTAGAGGCAAGTCCGCAGTAGGAGCAGGGTCTGGCGCATGACATGAATCATCTGGGACTAGGGTTGGATGTGGACGACGATGATAAGTTAGTAGTGGTGGCACTGCAACTGGAGATGTAGACGTAACTGTAGATCCCTCAAAGGTTGGCACAGGTAAAATTTGAGGTATGGGTAAGACCATAGAGACATCACTACGATCAGAAGATGTATAATAAGGCTGAGACTCAAAAAATGTAACATCAACAGACATAAGGTATCGGTGAAGAACATGTGAATAACAACGATATCCTTTTTGAACTCTAGAGTAACCAAGAAAGACACATTTGAGGCACGAGGAGCTAATTTATCTTTTCCTGGGGCTAAATTATGAAGAAAGCATGTACTCCAAACGACACGAGAGGGGATAGGATAAAGATGTGACTGAGGAAACAATATGGAATATGGAACATGATTTTGAATATAAGAAGAGGGCATTCTGTTAATTTAATAATAAGCAGAAAGGACTGCATCGCCCCAAAAATGCATCGAAACATGGCAATTCTATGAGGAGAGTGCGAGCAGTCTCTATGAGATATGCCTATTCTTTCTTTCTGCGACACCATTTTGTTGAGGAGTGTATGGACAAGATGTTTGGTGAATGATTCCGTGGTGAGACATAAATTCCTGAAATTGGGGTGATAAGTATACTAAGGCATTATCACTACGGAATGTACGAATAGAAACACCAAACTGATTTTGTATTTCAGCAAAGAAAACTTTGAAAATAGAAAATAACTCAGAACGATCTTTCATTAAGAAAACCCAAGTGCATCTCGAATAATCATCAATGAAACTAACAAAATAACGAAATCCTAAGGGGGAACTGACTCTACTAGTACCCCAAATATTAGAATGAACTAATGAAAAAATAGACTCTGAACGACCCTCAGTACTACGAGAAAATGTAGCACGAGTGTGTTTCCCAAATTGACACGACTCACAATCTAATGTGGATAAACCAGACAAACTAGGTACCATCTTTTTCAATTTGGATAGACTTGAGTGTCCCAAACGTTTGTGAATTAGATCTGAGGAATCTGTAACGGAGCATGCTATTAAAGAATTAGAAGAGGTAAGATAGTAAAGGCCTTGTGATTCATATCTTGTTCCAATAGTCTGTCCTGTACTGCGGTCCTGCATGACAAAGAAATGATCAAAAAAATTATGCTACAATGTAGGGCTTTCGTCAAACGACTAACCGATGCTAGATTAAAAGGAGAACCAGGGACATAAAGAACAGAGTCAAGAGTGACAGAAGATATGGGTTTGGCTTTTCCAACCCCTTTTGGTTTTGTTTGTATCCCATTGGCTAATGTAATAGATGAAAGAGATTATGAATAGATTATATCAGATAAAAGTGATTTATTACCAGTGATATGATCAGAAGCCCCCGATTCTATGACCCATGATCCAATAGTGTTAGACTGTGATATACTAGTACAAAATATTACCCGCAACAGAAACATTAGGTTTTGCAATCGAAACTACTTGTAGAGACGTTTGTTTATTTGCACAATACGGAAAAAACTCTATATATTCCTTTAGAACAACAGGATCATAACTGGGTGATCCACCATGCAAAATAAAACATATGTCACGAGTGTGTCCAGGTTTATGACATGACTACACTTAGATCGAGATTTTTCAAAAAATTCTCTCCCCCGTCTATTCTCCATGGATTTGTATGTACGCTTGGAACTGCCAGAAGCTGCTACACAAGTCTGAAAATATTGGAAGCTGCCGAAATCTGCCCGCAGTGGCCTGAAAAATTCTGATATTGCCGGAATTTTGCTGGGAACTGCCCAAAAAAAATCACCGGAACCCTAATTTCGGTGATCGGATCTAGAGATAACTGTATGGTTCTTACCGAAAACACTGGACGACCCTAACAGAAGAGAGAAACTCGAAAAAAAGAAGAGAGACCCGAGCAGCACTCACGCGCCGGAAGCTGCCCAAAAATCACCGCAACCCTAATTTCGGTGATCGAATCTAAATAAAAATGGTCAAAAACAGTATAGTCTGGGTCGGAATGGCTGGACGACCCCACCTGTCGAAAAAAATCTCAAAGACTATGGACGGAAAAGTCCTCACGCGCCGGCGAGTGAGCCAGATCTCGCCGGAATCTGCCACCTTCGATCGGCGCGTGAGGGCGCGTGCGGTGCTGTTTTCTGGTGGTTCTTGCTGGGGTTTGGTCGCGGGAGGTTTCCTAGCCTCGTGTTGGTGTTGGTTTTCGCACAACACCCACTAAATAAAAAATGATAAAATCAGTCCCAAACGTCACCGGAAATTGAATTGTTTGTTTCTCACCAATGCCCTGATACCATGAGAGAAATAATGGAGAAAATATTATTGAATTGCGCATCTAAATTGTTACATGAAGACCCTATTTATAGACACTACATTGAAAACCTTTTCCAACTAGAATTCCTATTGTAATTCCTATTCTAAGTAAGAAATATTTATTCCTATTCTAACAACCTCTATCCTGGATTTGATCTTCTATTTTGTGTTTGTGGCCCTCATCATGTCAAATTATATTGTTTGTAGTAAAAGAGAAGAATTGTTTGTACGTACTACATGTGTCTATTTCATGTCTATTGAAAGTTATTCCTTTTGATTAATTAAATCAACATTAGTGGCTATCTTAATGTTTATATTCTACAACGACTTGAGCTAGTATTTTTCTTACAGAATGCTCTGTTAACAGAGCAACAATCAGCAGCCATACAAGCACTTTCCCATGCAGTTGCCGAGAGACCTTTCCCGTCCAATTTGGTGAGTTTTTCCTTCTTGGTTGGTTTCAGAATATATCTATCTCTAACTCAATTACCTGAAATATGTTTTTATTTCAATTTCCAGGACCAAGTTTCTGGACATGATAACAGCCTCTCTGTTTCAACAAAGCTTAGTTCTCTAGAGG</genome_strand>
        <mrna_strand>CCCAAAGCTAAGCCAGAGGATCATCCCAGATCTCCAACTTCATCGTTCAAATCACCCTTTTTTTCAACTTCGAAGTCGAAATTGCTTCCATTGAAGCTCCAAAATCCATATGGTGATGGCTACAATCATCTGTAGTATTGATTGTTTTGGTATCAGTGATTGACTAGTTACTACACAGTCCGTTTCCCCCTCATTTTTCATCAATTCTGTTTCGTTTTACTTTTTACACGAACAGAAACAGTTGCAAAGTAGTGGAAGAAGAGAGTGATGATAATACTATGGCGGCAACGAGAAGGCCGGGGGTTCTCAAGTCCGAAGCTGTTTCCAAAGGCTATAATTTCGCTTCTACTTGGGAACAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCTCTGTTAACAGAGCAACAATCAGCAGCCATACAAGCACTTTCCCATGCAGTTGCCGAGAGACCTTTCCCGTCCAATTTG....................................................................................GACGAAGTTTCTGGACATGATAACAGCCTCTCTGTTTCAACAAAGCTTAGTTCTCTAGAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E330878" ref_strand="+" ref_description="SGN-E330878 [cTOD-10-F8]">
      <seq>tggtatcagtaattgactagttactacacagtccgtttccccctcatttttcatcaattctgtttcgttttactttttacacgaacagaaacagttgcaaagtagtggaagaagagagtgatgataatactatggcggcaacgacaaggccgggggttctcaagtccgaagctgtttccaaaggctataatttcgcttctacttgggaacagaatgctctgttaacagagcaacaatcagcagccatacaagcactttcccatgcagttgccgagagacctttcccgtccaatttggaccaagtttctggacatgataacagcctctctgtttcaacaaagcttag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="-" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="77744" stop="71585"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77444" g_stop="77233" g_length="212"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="212" r_length="212" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="77232" i_stop="72103" i_length="5130">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72102" g_stop="72019" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="213" r_stop="296" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72018" i_stop="71935" i_length="84">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71934" g_stop="71885" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="346" r_length="50" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="-" ref_id="SGN-E330878" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>346</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E330878" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77444" e_stop="77233"/>
          <exon e_start="72102" e_stop="72019"/>
          <exon e_start="71934" e_stop="71885"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTATCAGTAATTGACTAGTTACTACACAGTCCGTTTCCCCCTCATTTTTCATCAATTCTGTTTCGTTTTACTTTTTACACGAACAGAAACAGTTGCAAAGTAGTGGAAGAAGAGAGTGATGATAATACTATGGCGGCAACGACAAGGCCGGGGGTTCTCAAGTCCGAAGCTGTTTCCAAAGGCTATAATTTCGCTTCTACTTGGGAACAGGTTCACTCTCTATTTTCTACATTGTTCAGATTTTCTCCAGATTTACTAGATTTGTTTGAACGCATAACCAAAATTATGTAGATATCTGATTCTATGACAAATTTTGATGACCGGATTTTTATCATATGCACTGATCCTGTTGAAATAATGAATAGTAAAGCGGTGATTGGAAAAGGGGATCAAATTACATTGGATTATTGCTTGATTTCTTGGATTCCTTACAGCTTAAGAAAATCCAGCAAATCTTTTAACTATATCTTAGTAATATCTTGGTACTAAGTTTCTCTAATAAATTTTATCACTTACCCAAAAAAGGTGAAAAAAAGGAGGATCAGAATTGTTTCTTTGTGCGATAAAGTTCTCAGTTGATTTTAACATGTGTTTGTCGTCTCATTTCAACGGCAAGGTTTAGCTGCTGGTGATTGTGTCGCATATTCTCCGTTGAACTATCTTTTGAAGTTTTATTTTCATTGTAATGTGACACTGCTTCTCTTTTTCCTCGTATAACCACCGGCTAACTAGCTGCTGAAACTTTTACTTTTAGCTTATTCTTGCAATAGCTATTGGAAAATCACCTTTGAGAGAAATAATGGAGAAAATATTATTGAATTGCTCATCTAAATTGTTACATGAAGACCCTATTTATAGACACTACATTGGAAATCTTTTCTAACTAGAATTCCTATTCTAAGTAAGAAATACTTATTTCTATTCTAACACTCCCCCTCAAGCTGGTGCATACAAATTATATGCACCTAGCTTGTTACAGATGTAATTAATACGAGGACATGTGAGAGACTTAGTGAACATATCCGCAAGCTGATCATTTGACTTCACAAATTTTGTAACAATATCTCCTGAGAGTATCTTTTCTCTGAGAAAGTGACAGTCAATCTCAATGTGCTTAGTCCTTTCATGAAACACTGGATTTGATGCGATATGAAGAGCCGCTTGATTATCACACAAAAGTTCCATCTGATCAATTTTGCCGAATTTTAGTTCTCCCAGTAATTATTTGTGCCAAACTAACTCACAAGTTGCTGTCGCTATTGCTCGATATTCTGATTCTGCACTAGATTGAGAAGCCACATTTTGTTTCTTACTCTTCCACGACACCAAATTACCTCCAACTAAAACACAATATCCGGATGTCAAACGTCTGTTAGAGGGTAATCCTGCCCAATCAGTGTCTGTATATCCAATAATATGCTCATGACCTTGATCCTCAAAGAGTAGTCCTTTGCCGGGGGCTGACTTTATATATCGAAGAATATGAACAACTGCTTCCCAATGACTATCACAAGGGGAAGTCATAAACTGACTTACAACACTCACGGGAAAAGAGATGCCTGGTCTAGTCACTATGAGATAATTCAACTTTCCAACAAGTCGTCTATACCTTTAAGGATTACTAAGTGGCTCCACCTGTCTCGGAAGAAGTTTAACATTCGGATCCATCGGAGTGTCAATAGGTGTACATCCCATCATTCCTGTCTCCTCAAGAATGTCTAAGGCATACTTGTGTTTAGAGATAACAATGCCTGATCTAGATTGAGCAACCTCAATACCTAGAAAATACTTCAATCTACCAAGGTCTTTTGTCTGAAAGTGCTTAAAAAGATGTTGCTTTATATCGGTGATATAGTCTTGATCATTATCAGTGGTAACAATATCATCAACATAAACAACCAAATAGATACATCGACCTGGTGCAGAATGTCGATAAAACACAAAGTGATTTGATCCATTACGAGTCATGCCAAACTTCTGAATTACTGTGCTAAACTTCCCAAACCAAGCTCGAGGAGACTGTTTCAGACCATAGAGTGACCTACGCAATCGACATACAAGGCTACTAGACTCCCCCTGAGCAACAAAACTAGGTGGTTGCTCCATATAGACTTCTTCCTCAAGATCACTAGCAGAAAAGCATTCTTTATGTCCAACTGATAAAGAGGACAATGACGAACAACAACCATAGATTAGAAAAAGACGAACATATGCTATTTTAGCCACAGGAGCAAAAGTGTCACTATAATCTAGCCCAAATATCTGAGTATACCCTTTGGCGACAAGGAGAACCTTAAGTCGATCAACCTAACCATCTAGACCAATTTTGACTGCATAAACCCAATGACAACCAACAGTAGATTTACATGCAGGAAGGGAGACAAGCTCCCAAGTATCACTCTTATGTAAAGCAGACATCTCATCAACCATAGCCTGCCTCCATCTAGAATGAGAAAGTGCTTCACCTATAGTCTTAGGAATGGAAATAGAGGACAATGACGACACAAAGGCATAATGGGTGATGATATATGATGATAACTTAAGAAGGTAAATGCGGGTTAGTATTTCGAGTAGATTGTATACCTTTTTGAAGTGCAAGCGGTGGGCTAGGTAGAGGCAAGTCCGCAGTAGGAGCAGGGTCTGGCGCATGACATGAATCATCTGGGACTAGGGTTGGATGTGGACGACGATGATAAGTTAGTAGTGGTGGCACTGCAACTGGAGATGTAGACGTAACTGTAGATCCCTCAAAGGTTGGCACAGGTAAAATTTGAGGTATGGGTAAGACCATAGAGACATCACTACGATCAGAAGATGTATAATAAGGCTGAGACTCAAAAAATGTAACATCAACAGACATAAGGTATCGGTGAAGAACATGTGAATAACAACGATATCCTTTTTGAACTCTAGAGTAACCAAGAAAGACACATTTGAGGCACGAGGAGCTAATTTATCTTTTCCTGGGGCTAAATTATGAAGAAAGCATGTACTCCAAACGACACGAGAGGGGATAGGATAAAGATGTGACTGAGGAAACAATATGGAATATGGAACATGATTTTGAATATAAGAAGAGGGCATTCTGTTAATTTAATAATAAGCAGAAAGGACTGCATCGCCCCAAAAATGCATCGAAACATGGCAATTCTATGAGGAGAGTGCGAGCAGTCTCTATGAGATATGCCTATTCTTTCTTTCTGCGACACCATTTTGTTGAGGAGTGTATGGACAAGATGTTTGGTGAATGATTCCGTGGTGAGACATAAATTCCTGAAATTGGGGTGATAAGTATACTAAGGCATTATCACTACGGAATGTACGAATAGAAACACCAAACTGATTTTGTATTTCAGCAAAGAAAACTTTGAAAATAGAAAATAACTCAGAACGATCTTTCATTAAGAAAACCCAAGTGCATCTCGAATAATCATCAATGAAACTAACAAAATAACGAAATCCTAAGGGGGAACTGACTCTACTAGTACCCCAAATATTAGAATGAACTAATGAAAAAATAGACTCTGAACGACCCTCAGTACTACGAGAAAATGTAGCACGAGTGTGTTTCCCAAATTGACACGACTCACAATCTAATGTGGATAAACCAGACAAACTAGGTACCATCTTTTTCAATTTGGATAGACTTGAGTGTCCCAAACGTTTGTGAATTAGATCTGAGGAATCTGTAACGGAGCATGCTATTAAAGAATTAGAAGAGGTAAGATAGTAAAGGCCTTGTGATTCATATCTTGTTCCAATAGTCTGTCCTGTACTGCGGTCCTGCATGACAAAGAAATGATCAAAAAAATTATGCTACAATGTAGGGCTTTCGTCAAACGACTAACCGATGCTAGATTAAAAGGAGAACCAGGGACATAAAGAACAGAGTCAAGAGTGACAGAAGATATGGGTTTGGCTTTTCCAACCCCTTTTGGTTTTGTTTGTATCCCATTGGCTAATGTAATAGATGAAAGAGATTATGAATAGATTATATCAGATAAAAGTGATTTATTACCAGTGATATGATCAGAAGCCCCCGATTCTATGACCCATGATCCAATAGTGTTAGACTGTGATATACTAGTACAAAATATTACCCGCAACAGAAACATTAGGTTTTGCAATCGAAACTACTTGTAGAGACGTTTGTTTATTTGCACAATACGGAAAAAACTCTATATATTCCTTTAGAACAACAGGATCATAACTGGGTGATCCACCATGCAAAATAAAACATATGTCACGAGTGTGTCCAGGTTTATGACATGACTACACTTAGATCGAGATTTTTCAAAAAATTCTCTCCCCCGTCTATTCTCCATGGATTTGTATGTACGCTTGGAACTGCCAGAAGCTGCTACACAAGTCTGAAAATATTGGAAGCTGCCGAAATCTGCCCGCAGTGGCCTGAAAAATTCTGATATTGCCGGAATTTTGCTGGGAACTGCCCAAAAAAAATCACCGGAACCCTAATTTCGGTGATCGGATCTAGAGATAACTGTATGGTTCTTACCGAAAACACTGGACGACCCTAACAGAAGAGAGAAACTCGAAAAAAAGAAGAGAGACCCGAGCAGCACTCACGCGCCGGAAGCTGCCCAAAAATCACCGCAACCCTAATTTCGGTGATCGAATCTAAATAAAAATGGTCAAAAACAGTATAGTCTGGGTCGGAATGGCTGGACGACCCCACCTGTCGAAAAAAATCTCAAAGACTATGGACGGAAAAGTCCTCACGCGCCGGCGAGTGAGCCAGATCTCGCCGGAATCTGCCACCTTCGATCGGCGCGTGAGGGCGCGTGCGGTGCTGTTTTCTGGTGGTTCTTGCTGGGGTTTGGTCGCGGGAGGTTTCCTAGCCTCGTGTTGGTGTTGGTTTTCGCACAACACCCACTAAATAAAAAATGATAAAATCAGTCCCAAACGTCACCGGAAATTGAATTGTTTGTTTCTCACCAATGCCCTGATACCATGAGAGAAATAATGGAGAAAATATTATTGAATTGCGCATCTAAATTGTTACATGAAGACCCTATTTATAGACACTACATTGAAAACCTTTTCCAACTAGAATTCCTATTGTAATTCCTATTCTAAGTAAGAAATATTTATTCCTATTCTAACAACCTCTATCCTGGATTTGATCTTCTATTTTGTGTTTGTGGCCCTCATCATGTCAAATTATATTGTTTGTAGTAAAAGAGAAGAATTGTTTGTACGTACTACATGTGTCTATTTCATGTCTATTGAAAGTTATTCCTTTTGATTAATTAAATCAACATTAGTGGCTATCTTAATGTTTATATTCTACAACGACTTGAGCTAGTATTTTTCTTACAGAATGCTCTGTTAACAGAGCAACAATCAGCAGCCATACAAGCACTTTCCCATGCAGTTGCCGAGAGACCTTTCCCGTCCAATTTGGTGAGTTTTTCCTTCTTGGTTGGTTTCAGAATATATCTATCTCTAACTCAATTACCTGAAATATGTTTTTATTTCAATTTCCAGGACCAAGTTTCTGGACATGATAACAGCCTCTCTGTTTCAACAAAGCTTAG</genome_strand>
        <mrna_strand>TGGTATCAGTAATTGACTAGTTACTACACAGTCCGTTTCCCCCTCATTTTTCATCAATTCTGTTTCGTTTTACTTTTTACACGAACAGAAACAGTTGCAAAGTAGTGGAAGAAGAGAGTGATGATAATACTATGGCGGCAACGACAAGGCCGGGGGTTCTCAAGTCCGAAGCTGTTTCCAAAGGCTATAATTTCGCTTCTACTTGGGAACAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCTCTGTTAACAGAGCAACAATCAGCAGCCATACAAGCACTTTCCCATGCAGTTGCCGAGAGACCTTTCCCGTCCAATTTG....................................................................................GACCAAGTTTCTGGACATGATAACAGCCTCTCTGTTTCAACAAAGCTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E487611" ref_strand="+" ref_description="SGN-E487611 [cSTE-26-G17]">
      <seq>gtgaagcactttctcattctggatggaggcaggctatggttgatgagatgtctgctttacataagagtggtacttgggagcttgtctcccttcctgcaggtaaatctactgttggttgtcgttgggtttatgctatcaaaattggtccagacggtcaggttgatcgacttaaggctcgccttgttgccaaagggtatactcagatatttgggctagattatagtgacacttttgctcctgtggctaaaattgcatctgttcgtctttttctatctatggttgccgttcgtcattggcctcttcatcagttggacattaagaatgcttttctgcatggttatcttgaggaagaagtctatatggagcaaccacctggttttgttgctcagggggagtctagtagccttgtatgtcgattgcgcaggtcactctatggtctaaaacagtctcctcgagcttggtttgggaagttcagcacagtaattcaggagtttggcatgactcgtagtggagctgatcactctgtgttttatcggcattctgcaccaagtcaatgtatctatttggttgtttatgttgatgatattgttatcaccggtaatgatcaagatggtatcaccgatttgaagcaacatctctttaagcacttccagactaaagaccttggcagattgaagtattttctangtattgaggttgctcagtctagatcaggtattgttatttctcaacgcaagtatgccttagacattcttgaggagacaggaatgatggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="74678" stop="76052"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74978" g_stop="75752" g_length="775"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="775" r_length="775" r_score="0.929"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E487611" ref_strand="+">
        <total_alignment_score>0.929</total_alignment_score>
        <cumulative_length_of_scored_exons>775</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E487611" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74978" e_stop="75752"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAAGCACTTTCTCATTCTAGATGGAGGCAGGCTATGGTTGATGAGATGTCTGCTTTACATAAGAGTGATACTTGGGAGCTTGTCTCCCTTCCTGCATGTAAATCTACTGTTGGTTGTCATTGGGTTTATGCAGTCAAAATTGGTCTAGATGGTTAGGTTGATCGACTTAAGGTTCTCCTTGTCGCCAAAGGGTATACTCAGATATTTGGGCTAGATTATAGTGACACTTTTGCTCCTGTGGCTAAAATAGCATATGTTCGTCTTTTTCTAATCTATGGTTGTTGTTCGTCATTGTCCTCTTTATCAGTTGGACATAAAGAATGCTTTTCTGC-TAGTGATCTTGAGGAAGAAGTCTATATGGAGCAACCACCTAGTTTTGTTGCTCAGGGGGAGTCTAGTAGCCTTGTATGTCGATTGCGTAGGTCACTCTATGGTCTGAAACAGTCTCCTCGAGCTTGGTTTGGGAAGTTTAGCACAGTAATTCAGAAGTTTGGCATGACTCGTAATGGATCAAATCACTTTGTGTTTTATCGACATTCTGCACCAGGTCGATGTATCTATTTGGTTGTTTATGTTGATGATATTGTTACCACTGATAATGATCAAGACTATATCACCGATATAAAGCAACATCTTTTTAAGCACTTTCAGACAAAAGACCTTGGTAGATTGAAGTATTTTCTAGGTATTGAGGTTGCTCAATCTAGATCAGGCATTGTTATCTCTAAACACAAGTATGCCTTAGACATTCTTGAGGAGACAGGAATGATGGG</genome_strand>
        <mrna_strand>GTGAAGCACTTTCTCATTCTGGATGGAGGCAGGCTATGGTTGATGAGATGTCTGCTTTACATAAGAGTGGTACTTGGGAGCTTGTCTCCCTTCCTGCAGGTAAATCTACTGTTGGTTGTCGTTGGGTTTATGCTATCAAAATTGGTCCAGACGGTCAGGTTGATCGACTTAAGGCTCGCCTTGTTGCCAAAGGGTATACTCAGATATTTGGGCTAGATTATAGTGACACTTTTGCTCCTGTGGCTAAAATTGCATCTGTTCGTCTTTTTCT-ATCTATGGTTGCCGTTCGTCATTGGCCTCTTCATCAGTTGGACATTAAGAATGCTTTTCTGCATGGTTATCTTGAGGAAGAAGTCTATATGGAGCAACCACCTGGTTTTGTTGCTCAGGGGGAGTCTAGTAGCCTTGTATGTCGATTGCGCAGGTCACTCTATGGTCTAAAACAGTCTCCTCGAGCTTGGTTTGGGAAGTTCAGCACAGTAATTCAGGAGTTTGGCATGACTCGTAGTGGAGCTGATCACTCTGTGTTTTATCGGCATTCTGCACCAAGTCAATGTATCTATTTGGTTGTTTATGTTGATGATATTGTTATCACCGGTAATGATCAAGATGGTATCACCGATTTGAAGCAACATCTCTTTAAGCACTTCCAGACTAAAGACCTTGGCAGATTGAAGTATTTTCTANGTATTGAGGTTGCTCAGTCTAGATCAGGTATTGTTATTTCTCAACGCAAGTATGCCTTAGACATTCTTGAGGAGACAGGAATGATGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E427595" ref_strand="+" ref_description="SGN-E427595 [STM-48-D14]">
      <seq>gtgaagcactttctcattctggatggaggcaggctatggttgatgagatgtctgctttacataagagtggtacttgggagcttgtctcccttcctgcaggtaaatctactgttggttgtcgttgggtttatgctatcaaaattggtccagacggtcaggttgatcgacttaaggctcgccttgttgccaaagggtatactcagatatttgggctagattatagtgacacttttgctcctgtggctaaaattgcatctgttcgtctttttctatctatggttgccgttcgtcattggcctcttcatcagttggacattaagaatgcttttctgcatggttatcttgaggaagaagtctatatggagcaaccacctggttttgttgctcanggggagtctagtagccttgtatgtcgattgcgcaggtcactctatggtctaaaacagtctcctcgagcttggtttgggaagttcagcacagtaattcaggagtttggcatgactcgtagtggagctgatcactctgtgttttatcggcattctgcaccaagtcaatgtatctattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="74678" stop="75842"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74978" g_stop="75542" g_length="565"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="565" r_length="565" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E427595" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>565</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E427595" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74978" e_stop="75542"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAAGCACTTTCTCATTCTAGATGGAGGCAGGCTATGGTTGATGAGATGTCTGCTTTACATAAGAGTGATACTTGGGAGCTTGTCTCCCTTCCTGCATGTAAATCTACTGTTGGTTGTCATTGGGTTTATGCAGTCAAAATTGGTCTAGATGGTTAGGTTGATCGACTTAAGGTTCTCCTTGTCGCCAAAGGGTATACTCAGATATTTGGGCTAGATTATAGTGACACTTTTGCTCCTGTGGCTAAAATAGCATATGTTCGTCTTTTTCTAATCTATGGTTGTTGTTCGTCATTGTCCTCTTTATCAGTTGGACATAAAGAATGCTTTTCTGC-TAGTGATCTTGAGGAAGAAGTCTATATGGAGCAACCACCTAGTTTTGTTGCTCAGGGGGAGTCTAGTAGCCTTGTATGTCGATTGCGTAGGTCACTCTATGGTCTGAAACAGTCTCCTCGAGCTTGGTTTGGGAAGTTTAGCACAGTAATTCAGAAGTTTGGCATGACTCGTAATGGATCAAATCACTTTGTGTTTTATCGACATTCTGCACCAGGTCGATGTATCTATTT</genome_strand>
        <mrna_strand>GTGAAGCACTTTCTCATTCTGGATGGAGGCAGGCTATGGTTGATGAGATGTCTGCTTTACATAAGAGTGGTACTTGGGAGCTTGTCTCCCTTCCTGCAGGTAAATCTACTGTTGGTTGTCGTTGGGTTTATGCTATCAAAATTGGTCCAGACGGTCAGGTTGATCGACTTAAGGCTCGCCTTGTTGCCAAAGGGTATACTCAGATATTTGGGCTAGATTATAGTGACACTTTTGCTCCTGTGGCTAAAATTGCATCTGTTCGTCTTTTTCT-ATCTATGGTTGCCGTTCGTCATTGGCCTCTTCATCAGTTGGACATTAAGAATGCTTTTCTGCATGGTTATCTTGAGGAAGAAGTCTATATGGAGCAACCACCTGGTTTTGTTGCTCANGGGGAGTCTAGTAGCCTTGTATGTCGATTGCGCAGGTCACTCTATGGTCTAAAACAGTCTCCTCGAGCTTGGTTTGGGAAGTTCAGCACAGTAATTCAGGAGTTTGGCATGACTCGTAGTGGAGCTGATCACTCTGTGTTTTATCGGCATTCTGCACCAAGTCAATGTATCTATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E744601" ref_strand="+" ref_description="SGN-E744601 [GI|1143809]">
      <seq>gaattcggcacgagatttttggcggctcctcacgcctttgaaatatttccttttgcctccattcttccattctcagtgagcatcaagaaaattagcaatggagcagcagcacaggaatcagaagtcgatgcaagaccaaaatgatgaaatcgaggatgttcaacacggcccttttccagttgaacaacttcaggcatcagggattgcagctctagatgtaaaaaaactcaaggatgctggtctatgtacagttgaatctgttgtttatgctccaagaaaggaacttctgcagataaaaggaattagtgaagctaaagttgacaagattattgaggcagcttcaaaattagtgcctttgggattcactagtgccagccaactccatgcacagaggcttgaaatcatacagataacttctggatcgaaagaacttgacaagatattagaaggaggaatcgaaactggatctattactgaaatttacggagagttccgatgtggaaagactcagctgtgtcacacactatgcgtgacttgtcaacttccattagatcagggaggtggtgaagggaaagcaatgtacattgatgctgagggtactttcagaccacaaagacttttacaaattgcagacaggtatggattgaatggtcctgatgtcctggagaatgtagcctatgctcgagcttataataccgatcatcaatcaagacttttgcttgaggcagcctcaatgatggtggagaccaggtttgctctcatgattgtggacagtgctactgccctttatagaactgacttctctgggagaggagagttgtctgccaggcagatgcatcttgcaaagtttctgagaagccttcagaagttagcagatgagtttggtgttgctgttgttattacgaaccaagttgttgctcaagtggatggttctgctgtatttgctgggcctcaaataaaacccattggtggcaacatcatggcacatgcttctacgacgagactagctctgaggaagggtagggccgaggagcggatttgtaaagtagtcagttcgccatgcttagctgaagcagaagcaagatttcaaatttctgttgaaggagtcactgatgtaaaggactaaatgtgtgatcagcacattgtttactactagtactattttttgtttcctacttggtgtacgattttgtcatcgttttgaaggttagttaaccataaaaagaagtatgctatatgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="-" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="90449" stop="86297"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90147" g_stop="89968" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="14" r_stop="193" r_length="180" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89967" i_stop="88689" i_length="1279">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.021" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88688" g_stop="88544" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="194" r_stop="338" r_length="145" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88543" i_stop="88414" i_length="130">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.952" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="88413" g_stop="88303" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="339" r_stop="449" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="88302" i_stop="88219" i_length="84">
            <donor d_prob="0.894" d_score="1.00"/>
            <acceptor a_prob="0.172" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="88218" g_stop="88127" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="450" r_stop="541" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="88126" i_stop="88036" i_length="91">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="88035" g_stop="87941" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="542" r_stop="636" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="87940" i_stop="87857" i_length="84">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="87856" g_stop="87743" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="637" r_stop="750" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="87742" i_stop="87321" i_length="422">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="87320" g_stop="87191" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="751" r_stop="880" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="87190" i_stop="87040" i_length="151">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="87039" g_stop="86918" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="881" r_stop="1002" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="86917" i_stop="86837" i_length="81">
            <donor d_prob="0.948" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="86836" g_stop="86598" g_length="239"/>
          <reference_exon_boundary r_type="cDNA" r_start="1003" r_stop="1241" r_length="239" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="-" ref_id="SGN-E744601" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1228</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E744601" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90147" e_stop="89968"/>
          <exon e_start="88688" e_stop="88544"/>
          <exon e_start="88413" e_stop="88303"/>
          <exon e_start="88218" e_stop="88127"/>
          <exon e_start="88035" e_stop="87941"/>
          <exon e_start="87856" e_stop="87743"/>
          <exon e_start="87320" e_stop="87191"/>
          <exon e_start="87039" e_stop="86918"/>
          <exon e_start="86836" e_stop="86598"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTTTTGGCGGCTCCTCACGCCTTTGAAATATTTCCTTTTGCCTCCATTCTTCCATTCTCAGTGAGCATCAAGAAAATTAGCAATGGAGCAGCAGCACAGGAATCAGAAGTCGATGCAAGACCAAAATGATGAAATCGAGGATGTTCAACACGGCCCTTTTCCAGTTGAACAACTTCAGGTTTCCCCCCTTTTCTTCTCTTAATTGAGGAGTTAATTCAATCCTTTTTATATATCAAGTGTCCTAAATCTTGGATTGGGGTAGTTGTTTTGGTGATAGTGATTGTTTATGATTTCAGATTCAGTGTAGCTGGGTCTGATCTTGAATCTTGAATTGTACTTCGTAGGTTAAATGTTGAATCTTGAAATGTGGTTCTGGGTTGAATCTTGAATGGTAAAAAACTGAATTTTGTGAAACAGCTTTTTTTCAAGGTTGAATCTCATCTGCCTCGCTTATGGGAAATGCTTTTTTTTGTTTTGGGGTTTTCTATACTGTCCCCTTTTTGGCTTCTTGGAATGGGTTCGCTATCATAGTGCTCTTGTGGATTATTTCAAGCTAATATTTTTACAGTTATATCTATCTGTCCTTTACTGCCTTAGTTTTGAAGCTAAATGTTGTAGAATGCTTTGTGAAATGGGTTCTCGAAGCGATACCACTGATCTTGAAAACCTGGATGAGTGTTTTTTTGGTATGATGTTTCGATGGAGTCATGGAGCCCTGCGACAAGCCTAAGTTTAGTATTTAAGTGGAGAATGGTAGAGGAGTGACCCATCATTCCTGAGTTCGAATGCTATTGTTGGCAATAAGGGTTGGCTCAAAACAAATTTCTAGGTCATCAATTAAAAAAAACGATGTTGCTACAATGGTTTTGCTGCCCGTAATTACAACCAGTTTTCATTAGAAATTTGTAGGTTACTATCAGAGTGTACAGAATTGAGGGCACCATGAAAAGCTGCTTCTAGAAAGGCACTTGACACAAAATGATTTACATCATGACGCATGATATGGAGGGTCCAATAGGTGGGCGTTGATGGTCAGATATTTTAGTGTGCATCTGGGTTATGCGGTTGGCTTATCAGCTTTGCTCCTTACAAGATTTTATCAGTTTAGATCTTTTTTTGAAGAATTTTAAGTCTCGAGTGATTAACATTTACAGTAACTCAGATAAGTACTTATCATAAGTTTCTCATACTGCAGATTTTAAAAAGATTTACACGAAGTGAAACCTAAACTCTTGAGGATTTTTTAATCTTACTGGTAGTACATAAAAGCTGGACTAGGCATTTCCTAGATTTTTTTCTTGGAATTGTTAATATTTAAGAGGCAATATCTTTGAGTATCTTTTTCCAGTCTAGCTTGTAGTATAGTTGTTTCTGTTGAATGACACCCTGTAATTCTTCCAACTTTTAAAGGAAATGGTCCATTAGTTACTGAGGCATATAGCTTTTTTGTCCTCAAGGCATCAGGGATTGCAGCTCTAGATGTAAAAAAACTCAAGGATGCTGGTCTATGTACAGTTGAATCTGTTGTTTATGCTCCAAGAAAGGAACTTCTGCAGATAAAAGGAATTAGTGAAGCTAAAGTTGACAAGATTATTGAGGCAGGCATGTCTCTCTTCATTTAACTGCCATTGCCAGTGCTGATGTTTTTTCCCCTTACCTTCTTTTTTCACCCATTTCTGCAATTTTTTATCAGCAATCGGTACTAAATCTTTTTAATGCTGCATATGAACAGCTTCAAAATTAGTGCCTTTGGGATTCACTAGTGCCAGCCAACTCCATGCACAGAGGCTTGAAATCATACAGATAACTTCTGGATCGAAAGAACTTGACAAGATATTAGAAGGTAGTTATTTATCTAATTTGTGAACTTCTAGAACCGGAATTTGACCTGGCATCACAACCTCATACTTTTTTTGTCACTTGTCAGGAGGAATCGAAACTGGATCTATTACTGAAATTTACGGAGAGTTCCGATGTGGAAAGACTCAGCTGTGTCACACACTATGCGTGACTTGTCAAGTACGATAACATAGACATTTTTTTAATTTTAAAATCCCATAATAAAGTGCACAAGATTCATTCAAATATCATTCTTTATCTGTTATTTCAGCTTCCATTAGATCAGGGAGGTGGTGAAGGGAAAGCAATGTACATTGATGCTGAGGGTACTTTCAGACCACAAAGACTTTTACAAATTGCAGACAGGTCTTCTACTAGTAACTCAACTCACATGTTTTTCTGGTATTATGAAGTTCAAACTGTTGTCATCAGTGGGGTTAAATGCTGCAGGTATGGATTGAATGGTCCTGATGTCCTGGAGAATGTAGCCTATGCTCGAGCTTATAATACCGATCATCAATCAAGACTTTTGCTTGAGGCAGCCTCAATGATGGTGGAGACCAGGTTAACTTTCTCCATATTCCACTGCTCATTTATGAAAAAAATTTCTCATGCTTCTCAGTGGCTGTGATACTTTGAGCAAGAAAATGTGCTTAGATTATATCTTTTAGAGAATATTCCAACTCTTGATTGAGTATGTTGAAGGGTTCTAGTTTGAAGCAGCTCTCAATTTGTTTGATTATGGATGTCCATCTTACATCTAATGCATGTTTGGATACATCTTGGATCTGTTTGAAGTGTGCTCTCACCTGTTTCAAACAAATAAATCTTTTTGAAGTGTTCTAGAATTCAAAAAAAAATTTGCTTCCTGAATATAGTGAAAATCTTGAATTTGTGGCTTCCTTAGTTATTTGGGTTCATCTCATCAAAGCATAAAAAAGATCTCTGATAGAAGCTTAACTTTGAAAACTGTTTTGATCAAGCAGGTTTGCTCTCATGATTGTGGACAGTGCTACTGCCCTTTATAGAACTGACTTCTCTGGGAGAGGAGAGTTGTCTGCCAGGCAGATGCATCTTGCAAAGTTTCTGAGAAGCCTTCAGAAGTTAGCAGATGAGGTATTTAGCATGTCCCTCATTTGTGCATATTATCCAAAATGGAGTCTCCTCCTTCCTATTTTTCTCTCTTTGGTGGTGGTTAATGTTTTAGAATTAGATTAGGGGTTCTTGACTTACTTTTTCTATCTATCCTTTACTTTTACACTTGCAGTTTGGTGTTGCTGTTGTTATTACGAACCAAGTTGTTGCTCAAGTGGATGGTTCTGCTGTATTTGCTGGGCCTCAAATAAAACCCATTGGTGGCAACATCATGGCACATGCTTCTACGACGAGGTACGCATAATAGTACAACTATAACTTGCAGGCGCAGCTTATCTTGATAGCTGATATTTTACTCTCTTCAAATTCTGACAGACTAGCTCTGAGGAAGGGTAGGGCCGAGGAGCGGATTTGTAAAGTAGTCAGTTCGCCATGCTTAGCTGAAGCAGAAGCAAGATTTCAAATTTCTGTTGAAGGAGTCACTGATGTAAAGGACTAAATGTGTGATCAGCACATTGTTTACTACTAGTACTATTTTTTGTTTCCTACTTGGTGTACGATTTTGTCATCGTTTTGAAGGTTAGTTAACCATAAAAAGAAGTATGCTATATGAA</genome_strand>
        <mrna_strand>GATTTTTGGCGGCTCCTCACGCCTTTGAAATATTTCCTTTTGCCTCCATTCTTCCATTCTCAGTGAGCATCAAGAAAATTAGCAATGGAGCAGCAGCACAGGAATCAGAAGTCGATGCAAGACCAAAATGATGAAATCGAGGATGTTCAACACGGCCCTTTTCCAGTTGAACAACTTCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCAGGGATTGCAGCTCTAGATGTAAAAAAACTCAAGGATGCTGGTCTATGTACAGTTGAATCTGTTGTTTATGCTCCAAGAAAGGAACTTCTGCAGATAAAAGGAATTAGTGAAGCTAAAGTTGACAAGATTATTGAGGCAG..................................................................................................................................CTTCAAAATTAGTGCCTTTGGGATTCACTAGTGCCAGCCAACTCCATGCACAGAGGCTTGAAATCATACAGATAACTTCTGGATCGAAAGAACTTGACAAGATATTAGAAG....................................................................................GAGGAATCGAAACTGGATCTATTACTGAAATTTACGGAGAGTTCCGATGTGGAAAGACTCAGCTGTGTCACACACTATGCGTGACTTGTCAA...........................................................................................CTTCCATTAGATCAGGGAGGTGGTGAAGGGAAAGCAATGTACATTGATGCTGAGGGTACTTTCAGACCACAAAGACTTTTACAAATTGCAGACAG....................................................................................GTATGGATTGAATGGTCCTGATGTCCTGGAGAATGTAGCCTATGCTCGAGCTTATAATACCGATCATCAATCAAGACTTTTGCTTGAGGCAGCCTCAATGATGGTGGAGACCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGCTCTCATGATTGTGGACAGTGCTACTGCCCTTTATAGAACTGACTTCTCTGGGAGAGGAGAGTTGTCTGCCAGGCAGATGCATCTTGCAAAGTTTCTGAGAAGCCTTCAGAAGTTAGCAGATGAG.......................................................................................................................................................TTTGGTGTTGCTGTTGTTATTACGAACCAAGTTGTTGCTCAAGTGGATGGTTCTGCTGTATTTGCTGGGCCTCAAATAAAACCCATTGGTGGCAACATCATGGCACATGCTTCTACGACGAG.................................................................................ACTAGCTCTGAGGAAGGGTAGGGCCGAGGAGCGGATTTGTAAAGTAGTCAGTTCGCCATGCTTAGCTGAAGCAGAAGCAAGATTTCAAATTTCTGTTGAAGGAGTCACTGATGTAAAGGACTAAATGTGTGATCAGCACATTGTTTACTACTAGTACTATTTTTTGTTTCCTACTTGGTGTACGATTTTGTCATCGTTTTGAAGGTTAGTTAACCATAAAAAGAAGTATGCTATATGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E315132" ref_strand="+" ref_description="SGN-E315132 [cTOA-24-E14]">
      <seq>cctttgaaatatttccttttgcctccattcttccattctcagtgagcatcaagaaaattagcaatggagcagcagcacaggaatcagaagtcgatgcaagaccaaaatgatgaaatcgaggatgttcaacacggcccttttccagttgaacaacttcaggcatcagggattgcagctctagatgtaaaaaaactcaaggatgctggtctatgtacagttgaatctgttgtttatgctccaagaaaggaacttctgcagataaaaggaattagtgaagctaaagttgacaagattattgaggcagcttcaaaattagtgcctttgggattcactagtgccagccaactccatgcacagaggcttgaaatcatacagataacttctggatcgaaagaacttgacaagatattagaaggaggaatcgaaactggatctattactgaaatttacggagagttccgatgtggaaagactcagctgtggcacacactatgcgtgacttgtcaacttccattagatcagggaggtggtgaagggaaagcaatgtacattgatgctganggtactttcagaccacaaagacttttacaaattgcagacaggtatggattgaatggtcctgatgtcctggagaatgtagcctatgctcgagcttataataccgatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="-" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="90426" stop="87492"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90126" g_stop="89968" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="159" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89967" i_stop="88689" i_length="1279">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.021" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88688" g_stop="88544" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="160" r_stop="304" r_length="145" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88543" i_stop="88414" i_length="130">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.952" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="88413" g_stop="88303" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="415" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="88302" i_stop="88219" i_length="84">
            <donor d_prob="0.894" d_score="1.00"/>
            <acceptor a_prob="0.172" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="88218" g_stop="88127" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="416" r_stop="507" r_length="92" r_score="0.989"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="88126" i_stop="88036" i_length="91">
            <donor d_prob="0.954" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="88035" g_stop="87941" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="508" r_stop="602" r_length="95" r_score="0.989"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="87940" i_stop="87857" i_length="84">
            <donor d_prob="0.957" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="87856" g_stop="87792" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="603" r_stop="667" r_length="65" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="-" ref_id="SGN-E315132" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>667</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E315132" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90126" e_stop="89968"/>
          <exon e_start="88688" e_stop="88544"/>
          <exon e_start="88413" e_stop="88303"/>
          <exon e_start="88218" e_stop="88127"/>
          <exon e_start="88035" e_stop="87941"/>
          <exon e_start="87856" e_stop="87792"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTTTGAAATATTTCCTTTTGCCTCCATTCTTCCATTCTCAGTGAGCATCAAGAAAATTAGCAATGGAGCAGCAGCACAGGAATCAGAAGTCGATGCAAGACCAAAATGATGAAATCGAGGATGTTCAACACGGCCCTTTTCCAGTTGAACAACTTCAGGTTTCCCCCCTTTTCTTCTCTTAATTGAGGAGTTAATTCAATCCTTTTTATATATCAAGTGTCCTAAATCTTGGATTGGGGTAGTTGTTTTGGTGATAGTGATTGTTTATGATTTCAGATTCAGTGTAGCTGGGTCTGATCTTGAATCTTGAATTGTACTTCGTAGGTTAAATGTTGAATCTTGAAATGTGGTTCTGGGTTGAATCTTGAATGGTAAAAAACTGAATTTTGTGAAACAGCTTTTTTTCAAGGTTGAATCTCATCTGCCTCGCTTATGGGAAATGCTTTTTTTTGTTTTGGGGTTTTCTATACTGTCCCCTTTTTGGCTTCTTGGAATGGGTTCGCTATCATAGTGCTCTTGTGGATTATTTCAAGCTAATATTTTTACAGTTATATCTATCTGTCCTTTACTGCCTTAGTTTTGAAGCTAAATGTTGTAGAATGCTTTGTGAAATGGGTTCTCGAAGCGATACCACTGATCTTGAAAACCTGGATGAGTGTTTTTTTGGTATGATGTTTCGATGGAGTCATGGAGCCCTGCGACAAGCCTAAGTTTAGTATTTAAGTGGAGAATGGTAGAGGAGTGACCCATCATTCCTGAGTTCGAATGCTATTGTTGGCAATAAGGGTTGGCTCAAAACAAATTTCTAGGTCATCAATTAAAAAAAACGATGTTGCTACAATGGTTTTGCTGCCCGTAATTACAACCAGTTTTCATTAGAAATTTGTAGGTTACTATCAGAGTGTACAGAATTGAGGGCACCATGAAAAGCTGCTTCTAGAAAGGCACTTGACACAAAATGATTTACATCATGACGCATGATATGGAGGGTCCAATAGGTGGGCGTTGATGGTCAGATATTTTAGTGTGCATCTGGGTTATGCGGTTGGCTTATCAGCTTTGCTCCTTACAAGATTTTATCAGTTTAGATCTTTTTTTGAAGAATTTTAAGTCTCGAGTGATTAACATTTACAGTAACTCAGATAAGTACTTATCATAAGTTTCTCATACTGCAGATTTTAAAAAGATTTACACGAAGTGAAACCTAAACTCTTGAGGATTTTTTAATCTTACTGGTAGTACATAAAAGCTGGACTAGGCATTTCCTAGATTTTTTTCTTGGAATTGTTAATATTTAAGAGGCAATATCTTTGAGTATCTTTTTCCAGTCTAGCTTGTAGTATAGTTGTTTCTGTTGAATGACACCCTGTAATTCTTCCAACTTTTAAAGGAAATGGTCCATTAGTTACTGAGGCATATAGCTTTTTTGTCCTCAAGGCATCAGGGATTGCAGCTCTAGATGTAAAAAAACTCAAGGATGCTGGTCTATGTACAGTTGAATCTGTTGTTTATGCTCCAAGAAAGGAACTTCTGCAGATAAAAGGAATTAGTGAAGCTAAAGTTGACAAGATTATTGAGGCAGGCATGTCTCTCTTCATTTAACTGCCATTGCCAGTGCTGATGTTTTTTCCCCTTACCTTCTTTTTTCACCCATTTCTGCAATTTTTTATCAGCAATCGGTACTAAATCTTTTTAATGCTGCATATGAACAGCTTCAAAATTAGTGCCTTTGGGATTCACTAGTGCCAGCCAACTCCATGCACAGAGGCTTGAAATCATACAGATAACTTCTGGATCGAAAGAACTTGACAAGATATTAGAAGGTAGTTATTTATCTAATTTGTGAACTTCTAGAACCGGAATTTGACCTGGCATCACAACCTCATACTTTTTTTGTCACTTGTCAGGAGGAATCGAAACTGGATCTATTACTGAAATTTACGGAGAGTTCCGATGTGGAAAGACTCAGCTGTGTCACACACTATGCGTGACTTGTCAAGTACGATAACATAGACATTTTTTTAATTTTAAAATCCCATAATAAAGTGCACAAGATTCATTCAAATATCATTCTTTATCTGTTATTTCAGCTTCCATTAGATCAGGGAGGTGGTGAAGGGAAAGCAATGTACATTGATGCTGAGGGTACTTTCAGACCACAAAGACTTTTACAAATTGCAGACAGGTCTTCTACTAGTAACTCAACTCACATGTTTTTCTGGTATTATGAAGTTCAAACTGTTGTCATCAGTGGGGTTAAATGCTGCAGGTATGGATTGAATGGTCCTGATGTCCTGGAGAATGTAGCCTATGCTCGAGCTTATAATACCGATC</genome_strand>
        <mrna_strand>CCTTTGAAATATTTCCTTTTGCCTCCATTCTTCCATTCTCAGTGAGCATCAAGAAAATTAGCAATGGAGCAGCAGCACAGGAATCAGAAGTCGATGCAAGACCAAAATGATGAAATCGAGGATGTTCAACACGGCCCTTTTCCAGTTGAACAACTTCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCAGGGATTGCAGCTCTAGATGTAAAAAAACTCAAGGATGCTGGTCTATGTACAGTTGAATCTGTTGTTTATGCTCCAAGAAAGGAACTTCTGCAGATAAAAGGAATTAGTGAAGCTAAAGTTGACAAGATTATTGAGGCAG..................................................................................................................................CTTCAAAATTAGTGCCTTTGGGATTCACTAGTGCCAGCCAACTCCATGCACAGAGGCTTGAAATCATACAGATAACTTCTGGATCGAAAGAACTTGACAAGATATTAGAAG....................................................................................GAGGAATCGAAACTGGATCTATTACTGAAATTTACGGAGAGTTCCGATGTGGAAAGACTCAGCTGTGGCACACACTATGCGTGACTTGTCAA...........................................................................................CTTCCATTAGATCAGGGAGGTGGTGAAGGGAAAGCAATGTACATTGATGCTGANGGTACTTTCAGACCACAAAGACTTTTACAAATTGCAGACAG....................................................................................GTATGGATTGAATGGTCCTGATGTCCTGGAGAATGTAGCCTATGCTCGAGCTTATAATACCGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E261046" ref_strand="+" ref_description="SGN-E261046 [cLEG-55-B6]">
      <seq>tccaatggaaataatggtattgaatacaaatgtaacaagatcaatgcagtgcaacattgaatggaatggtgatgttggatttgaaatgttagaaggggtatacaagcatactgtgaacttgggtcaacaaaaatgtagttgaagatcatgggaattaaaaggtatcccatgtgcacatggtatagcagcaatgaactacttgaacatggatgcatcacaagcaatatctagttcgtatagaaaagacacaaatatgaagacatattctcatttcattcaaccagtcccaaacatggaaatgtggcctgaaagtagaaacccaatggttaaaccacctaaggcaagacaaatgcctggtaggtcaccaaagaatagaagaagagaaattggtgaagtgagaaaagctggaaagttgccaagaatggggacactaatgacatattcactttgcaaaggaccaaatcataacaagagaaattgtccaaaaaatcctaaacctatgtctacaccaacacccactcaagagtccaccactggaaaaaaagtggtagaggttattatgaaagaacaagcactagtaagacaggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0008H22-AT0N3/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0008H22.2" temp_strand="+" temp_description="C07SLe0008H22.2  AC212643.2 htgs_phase:2 submitted_to_sgn_as:gi|167832402|gb|AC212643.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLe0008H22, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces">
        <position start="100260" stop="101537"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100560" g_stop="101085" g_length="526"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="526" r_length="526" r_score="0.949"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101086" i_stop="101174" i_length="89">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101175" g_stop="101237" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="527" r_stop="588" r_length="62" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0008H22.2" gen_strand="+" ref_id="SGN-E261046" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>589</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0008H22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E261046" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100560" e_stop="101085"/>
          <exon e_start="101175" e_stop="101237"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCAATGGCAATGATGGTATTCAATACAAATGTAACAAGATCAATGCAGTGCAACATTGAATGGAATGGTGATGTTGGATTTGAAGTGTTAGAAGTGGTATACAAGCATACTGTGAACTTGGGTCAACAAAAATGTAATTGCAGATCATGGGAATTAAAAGGTATCCCATGTGCACATGGTATAGCAACAATCAACCACTTGAACATAGATGCATCACAAGCAATATCTAGTTGGTATAGAAAAGACACATATATGAAGACATATTCTTATTTCACTCAACCAGTCCCAAACATGGAAATGTGGCTTGAAAGTAGAAACCTAATGGTTGAACCACCTGAGGCAAGATAAATGCCTGGTAGGCCACCAAAGAACAGAAGAAGAGAAATTGGTGAAGTGAGAAAAGTTGGAAAGTTGCCAAGAATGGGGACAGTAATGACATGTTCACTTTGTAAAGGACCAAATCATAACAAGAGAAATTGTCCAAAAAATCCTAAACCTAAGTCTACACCAACACCCACTCAAGAGGTACATTCATATTAATTTGCTTTTAGAAATTATGTTAGATTACTTATTAAATTTAATGTCTTGTTGTGTTCTTTTTCCAATCATATTAGTCCACCATTGGAAAAAAGAGGGGTAGAGGTCATTATGAAAGAACAAGCACCAGTAAGACTGGT</genome_strand>
        <mrna_strand>TCCAATGGAAATAATGGTATTGAATACAAATGTAACAAGATCAATGCAGTGCAACATTGAATGGAATGGTGATGTTGGATTTGAAATGTTAGAAGGGGTATACAAGCATACTGTGAACTTGGGTCAACAAAAATGTAGTTGAAGATCATGGGAATTAAAAGGTATCCCATGTGCACATGGTATAGCAGCAATGAACTACTTGAACATGGATGCATCACAAGCAATATCTAGTTCGTATAGAAAAGACACAAATATGAAGACATATTCTCATTTCATTCAACCAGTCCCAAACATGGAAATGTGGCCTGAAAGTAGAAACCCAATGGTTAAACCACCTAAGGCAAGACAAATGCCTGGTAGGTCACCAAAGAATAGAAGAAGAGAAATTGGTGAAGTGAGAAAAGCTGGAAAGTTGCCAAGAATGGGGACACTAATGACATATTCACTTTGCAAAGGACCAAATCATAACAAGAGAAATTGTCCAAAAAATCCTAAACCTATGTCTACACCAACACCCACTCAAGAG.........................................................................................TCCACCACTGGAAAAAA-AGTGGTAGAGGTTATTATGAAAGAACAAGCACTAGTAAGACAGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>58</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="16378" PGL_stop="30205"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="16378" e_stop="16562"/>
            <exon e_start="16662" e_stop="16993"/>
            <exon e_start="19703" e_stop="19826"/>
            <exon e_start="19912" e_stop="20070"/>
            <exon e_start="21200" e_stop="22702"/>
            <exon e_start="27695" e_stop="27961"/>
            <exon e_start="28377" e_stop="29077"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.913" e_score="1.000"/>
          <exon-intron don_prob="0.569" acc_prob="0.915" e_score="0.997"/>
          <exon-intron don_prob="0.996" acc_prob="0.672" e_score="1.000"/>
          <exon-intron don_prob="0.758" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.997" e_score="0.996"/>
          <exon-intron don_prob="0.970" acc_prob="0.981" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="16378" e_stop="16562" e_length="185"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.913">
            <gDNA_intron_boundary i_start="16563" i_stop="16661" i_length="99"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="16662" e_stop="16993" e_length="332"/>
          </exon>
          <intron i_serial="2" don_prob="0.569" acc_prob="0.915">
            <gDNA_intron_boundary i_start="16994" i_stop="19702" i_length="2709"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="19703" e_stop="19826" e_length="124"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.672">
            <gDNA_intron_boundary i_start="19827" i_stop="19911" i_length="85"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="19912" e_stop="20070" e_length="159"/>
          </exon>
          <intron i_serial="4" don_prob="0.758" acc_prob="0.999">
            <gDNA_intron_boundary i_start="20071" i_stop="21199" i_length="1129"/>
          </intron>
          <exon e_serial="5" e_score="0.996">
            <gDNA_exon_boundary e_start="21200" e_stop="22702" e_length="1503"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.997">
            <gDNA_intron_boundary i_start="22703" i_stop="27694" i_length="4992"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="27695" e_stop="27961" e_length="267"/>
          </exon>
          <intron i_serial="6" don_prob="0.970" acc_prob="0.981">
            <gDNA_intron_boundary i_start="27962" i_stop="28376" i_length="415"/>
          </intron>
          <exon e_serial="7" e_score="0.997">
            <gDNA_exon_boundary e_start="28377" e_stop="29077" e_length="701"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16378" stop="16562"/>
              <exon start="16662" stop="16993"/>
              <exon start="19703" stop="19775"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369112" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16378" stop="16562"/>
              <exon start="16662" stop="16930"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246289" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16822" stop="16993"/>
              <exon start="19703" stop="19826"/>
              <exon start="19912" stop="20070"/>
              <exon start="21200" stop="21558"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703519" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16892" stop="16993"/>
              <exon start="19703" stop="19826"/>
              <exon start="19912" stop="20070"/>
              <exon start="21200" stop="21648"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E701704" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16906" stop="16993"/>
              <exon start="19703" stop="19826"/>
              <exon start="19912" stop="20070"/>
              <exon start="21200" stop="21567"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E263582" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19920" stop="20070"/>
              <exon start="21200" stop="21581"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293047" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21214" stop="21902"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E576695" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21376" stop="22164"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261101" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21380" stop="21637"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264225" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21469" stop="22129"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248090" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21469" stop="21995"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244238" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21749" stop="22428"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E556203" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21810" stop="22188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252657" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21822" stop="22514"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333991" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21895" stop="22678"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459449" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21895" stop="22677"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459418" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21919" stop="22702"/>
              <exon start="27695" stop="27739"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E602914" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22064" stop="22602"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E570570" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22093" stop="22702"/>
              <exon start="27695" stop="27777"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575819" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22190" stop="22653"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22253" stop="22702"/>
              <exon start="27695" stop="27961"/>
              <exon start="28377" stop="28419"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704949" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22348" stop="22702"/>
              <exon start="27695" stop="27961"/>
              <exon start="28377" stop="28639"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707731" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22476" stop="22702"/>
              <exon start="27695" stop="27961"/>
              <exon start="28377" stop="28605"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E433992" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22476" stop="22702"/>
              <exon start="27695" stop="27938"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404541" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22670" stop="22702"/>
              <exon start="27695" stop="27961"/>
              <exon start="28377" stop="28934"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E699849" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27713" stop="27961"/>
              <exon start="28377" stop="28718"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E394967" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27714" stop="27961"/>
              <exon start="28377" stop="28759"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249579" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27729" stop="27961"/>
              <exon start="28377" stop="29077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E701018" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28490" stop="29036"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244298" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAGGGTCACTACAGCAAGATTATCCTTCCTCACCTTCCGACCAACTGATTATTGTAGTATGCCTTTCAACACGCTGTGTTTGGAAAGGAACTGTTTGTGAGCCACCTCATATTTCTCGAATAAAATTTTATGGGATTACCGATATGCCTTTGGGACGGTTTTTACGAGACCGGTTGTTTGATGAG : AATTTTAGGTGTCCCTCATGTGAAATGCCTCCAGAAGCACATGTTCGTTGCTATACTCATCGGCAAGGCAGCCTCACAATTTCTGTAAAGAAGCTACCTGAATGTATCTTGCCAGGAGAACAGGAAGGAAAGATATGGATGTGGCACAGATGTCTGCGATGTCCTCGGGACAATGGTTTCCCTCCTCCAACCAGGAGGGTAGTAATGTCTAATGCTGCTTGGGGGTTGTCATTTGGGAAATTTTTGGAACTCAGTTTTTCAAATCATGCAGCAGCGAGCAGGGTTGCAAGTTGTGGTCATCTTCTTCACCGGGACTGTCTCCGGTTCTATGG : GTTTGGGAAAATGGTAGCTTGTTTTCGATATGCTCCTGTTCATGTTTATTCTGTCTTTCTCCCACCTCCAAAACTCGAATTTAGCTATGATAATCAGGAGTGGATTCAGAAAGAAGGTGATGAG : GTGCGCAGAAGGGCTAATGCGTTGTTTGCTGAGGTGTCCAAAGTTCTTCATGTCAAGTTGGAAAAATTCTCTGTTGATAGCAGCTTGAAAGCACCCAAGACAAGTGAGCAGATCACAGAGATGGAAGAAATATTAGAGAAGGAGAAAACTGAGTTTGAG : GGATTATTACGCAAGGCACTTAGCAGGGAGATCAAAGTTGGTCAGCCTACAGTTGACATCCTTGAGATAAATCAACTGAGAAGGCAGTTGGTTTTTCATGCTTATCTATGGGACAGACGTTTGATACATCTTTCCAGTTCTCATGGTAAAAATTCCCGAACTCCGGGCAGTTTGACACAACTGAAGGAGAAACCCCTCAGCTCTAGTGAGGAACTTCCTGAAAGGACTGCAATTTTGAGACCTGGAAAAAGTTTGGGGAGCTATGATTCAGCTCTTCAGAATGTGAAGACTGAAATAACATCTAGTGAAGGAAGACATGGTCAGATTCCTGATGGGGTTCACGAAAGATTGACTACTGATGAGAACCTAACTCACGGGAAAGACTGCGAGATTTTCTGTGCTATAAGAAATACAGGAGATGGTAATGTACTGGAACCTGGAAAAAATGTCAGACGTGTTCTTTCAGATGCAAAGTTCCCGTCTGTGGGAAGTTTATCCGACACTCTTGATGCTGCATGGACCGGTGAAAGCCACCTGGCTATTAAAGAGCATAACAGTGCATTTCCAGGTTCGTTCGTTGTAGATTCTACTGCTTTGACTGGAGTTTCAGCAAATACAGATGTCGAAAGGTCTCTGTGTGACAAAAATGGGGCTGAAATACCTCATTTATCTGCTAAGTCTGACAACACAGATTACCTGACCTGGGCAACGGCACATTTCTCAAATTTCTATCGTTCGTTCAACAAGAATATCACAGCAAATCCACAATATGTTGCTAAATTGAATGAGCATAATCCTGTTTATATCTTGTCGTTTAGCGAATTGCTACATCAAGGTGGTGCCAGGCTTCTTACAGCTGTTGGTGAAAATGACATTGTTATTCCAGTTTATGATGATGAGCCGACAAGTATCATCTCATATGCACTTGTCTCACCAGATTACCGCAATCAAATGTCAGATGAATCTCAAAACCTGAAAGAAAATCACAAGTTTTCAGCTTCTTTGTCATTTCTGGATTCATTAAATCTACTTCCGCTTCACTCTGTGGATGGAGTAGTTTCGGAATCTCCAAGAAGTTTTGGATCTACCAACGAAAGCATGTCATCGGGTTATAGTTCTCGCAGCTCAAACATGGATCCACCAGCATATATTAATGCTTTGCATGCCCGAATATCTTTCTCAGATGATGGCCCTCCTGGAAAGGTTAAGTACACAGTCACCTGCTATTATGCGAAGCAATTCGAGACCTTGAGAAAGTCTTGTTGCCCCAATGAATCAGACTTTATACGTTCCCTTAGCCGATGCAAAAAATGGGGTGCTCAGGGTGGGAAGAGCAATGTTTTCTTTGCCAAAACCTTGGACGACCGATTTATCATCAAGCAGGTAACGAAGACAGAGTTGGAGTCATTTATCAAGTTTGCACCAGCTTACTTTAAGTATTTATCTGACTCAATAGCTAGTGGGAGCCCAACTTGCTTGGCAAAGATTCTGGGGATCTACCAG : GTTACATCAAAGCATCTCAAAGGTGGGAAAGAATCAAGAATGGATGTGCTTGTTATGGAAAATCTTCTTTTTAAGCGCAACATCACTAGACTGTATGACCTCAAAGGGTCGTCTCGATCACGCTATAATCCAGATTCAAGTGGAAGTAACAAAGTTTTACTTGATCAGAACTTGATTGAAGCAATGCCAACTTCTCCGATTTTTGTGGGAACGCAAGCTAAGCGGCTGCTGCAGAGAGCTGTGTGGAATGATACTTCATTTCTAGCG : TCAATAGATGTGATGGATTACTCATTACTAGTTGGGGTGGATGAGAAGAAGCAGGAACTGGTGCTTGGTATTATTGATTTCATGAGACAGTATACGTGGGACAAGCATCTCGAGACTTGGGTAAAGGCTTCAGGTATTCTAGGTGGGCCGAAGAATGCAGCCCCAACGGTGATTTCTCCAAAGCAATACAAAATAAGATTCAGGAAAGCAATGTCTACATACTTTCTGATGGTGCCAGATGAGTGGCCTACATGAAGTGATACCCCAAGTATCAGTGCAGAAAAATTGCCCCGGCCGGTCTTGGTATAATTTTATCCATCCTTTCTTATGCCATCAAGTTTTGTGTATTTTGTGCAGGAATGTTGGGTAGTTGCTTTATCATTAGAGGATTACTTTTGTTTTTCCAAAGTAGTAGTATTACAGAGTTATTTCCATACAAAGAATTTGTTAGTTTCTGGGCGTTCCGCCAGTTGTACAGTCAATAGTCGGTCTTCGTTTCTTTTTATCCCACATTCTGATGCTCAATGGAAGCTCTTGGTATATTCATGTGTTTACATGAGAATTGAGACTCTTTTGACAAGGGCTGCCGTGGTAGCAGTAAAGATCAATGTAATTTGATCTTGTAAGTCCTACAATCGGATGGTTTCAAATAAGCTGCACTCGCGACATTTTGATTTTCAGGCACCTATGCAATGAGTTGT</gDNA_template>
            <first_frame> *  G  H  Y  S  K  I  I  L  P  H  L  P  T  N  *  L  L  *  Y  A  F  Q  H  A  V  F  G  K  E  L  F  V  S  H  L  I  F  L  E  *  N  F  M  G  L  P  I  C  L  W  D  G  F  Y  E  T  G  C  L  M  R :   I  L  G  V  P  H  V  K  C  L  Q  K  H  M  F  V  A  I  L  I  G  K  A  A  S  Q  F  L  *  R  S  Y  L  N  V  S  C  Q  E  N  R  K  E  R  Y  G  C  G  T  D  V  C  D  V  L  G  T  M  V  S  L  L  Q  P  G  G  *  *  C  L  M  L  L  G  G  C  H  L  G  N  F  W  N  S  V  F  Q  I  M  Q  Q  R  A  G  L  Q  V  V  V  I  F  F  T  G  T  V  S  G  S  M   : G  L  G  K  W  *  L  V  F  D  M  L  L  F  M  F  I  L  S  F  S  H  L  Q  N  S  N  L  A  M  I  I  R  S  G  F  R  K  K  V  M  R :   C  A  E  G  L  M  R  C  L  L  R  C  P  K  F  F  M  S  S  W  K  N  S  L  L  I  A  A  *  K  H  P  R  Q  V  S  R  S  Q  R  W  K  K  Y  *  R  R  R  K  L  S  L  R :   D  Y  Y  A  R  H  L  A  G  R  S  K  L  V  S  L  Q  L  T  S  L  R  *  I  N  *  E  G  S  W  F  F  M  L  I  Y  G  T  D  V  *  Y  I  F  P  V  L  M  V  K  I  P  E  L  R  A  V  *  H  N  *  R  R  N  P  S  A  L  V  R  N  F  L  K  G  L  Q  F  *  D  L  E  K  V  W  G  A  M  I  Q  L  F  R  M  *  R  L  K  *  H  L  V  K  E  D  M  V  R  F  L  M  G  F  T  K  D  *  L  L  M  R  T  *  L  T  G  K  T  A  R  F  S  V  L  *  E  I  Q  E  M  V  M  Y  W  N  L  E  K  M  S  D  V  F  F  Q  M  Q  S  S  R  L  W  E  V  Y  P  T  L  L  M  L  H  G  P  V  K  A  T  W  L  L  K  S  I  T  V  H  F  Q  V  R  S  L  *  I  L  L  L  *  L  E  F  Q  Q  I  Q  M  S  K  G  L  C  V  T  K  M  G  L  K  Y  L  I  Y  L  L  S  L  T  T  Q  I  T  *  P  G  Q  R  H  I  S  Q  I  S  I  V  R  S  T  R  I  S  Q  Q  I  H  N  M  L  L  N  *  M  S  I  I  L  F  I  S  C  R  L  A  N  C  Y  I  K  V  V  P  G  F  L  Q  L  L  V  K  M  T  L  L  F  Q  F  M  M  M  S  R  Q  V  S  S  H  M  H  L  S  H  Q  I  T  A  I  K  C  Q  M  N  L  K  T  *  K  K  I  T  S  F  Q  L  L  C  H  F  W  I  H  *  I  Y  F  R  F  T  L  W  M  E  *  F  R  N  L  Q  E  V  L  D  L  P  T  K  A  C  H  R  V  I  V  L  A  A  Q  T  W  I  H  Q  H  I  L  M  L  C  M  P  E  Y  L  S  Q  M  M  A  L  L  E  R  L  S  T  Q  S  P  A  I  M  R  S  N  S  R  P  *  E  S  L  V  A  P  M  N  Q  T  L  Y  V  P  L  A  D  A  K  N  G  V  L  R  V  G  R  A  M  F  S  L  P  K  P  W  T  T  D  L  S  S  S  R  *  R  R  Q  S  W  S  H  L  S  S  L  H  Q  L  T  L  S  I  Y  L  T  Q  *  L  V  G  A  Q  L  A  W  Q  R  F  W  G  S  T  R :   L  H  Q  S  I  S  K  V  G  K  N  Q  E  W  M  C  L  L  W  K  I  F  F  L  S  A  T  S  L  D  C  M  T  S  K  G  R  L  D  H  A  I  I  Q  I  Q  V  E  V  T  K  F  Y  L  I  R  T  *  L  K  Q  C  Q  L  L  R  F  L  W  E  R  K  L  S  G  C  C  R  E  L  C  G  M  I  L  H  F  *  R :   Q  *  M  *  W  I  T  H  Y  *  L  G  W  M  R  R  S  R  N  W  C  L  V  L  L  I  S  *  D  S  I  R  G  T  S  I  S  R  L  G  *  R  L  Q  V  F  *  V  G  R  R  M  Q  P  Q  R  *  F  L  Q  S  N  T  K  *  D  S  G  K  Q  C  L  H  T  F  *  W  C  Q  M  S  G  L  H  E  V  I  P  Q  V  S  V  Q  K  N  C  P  G  R  S  W  Y  N  F  I  H  P  F  L  C  H  Q  V  L  C  I  L  C  R  N  V  G  *  L  L  Y  H  *  R  I  T  F  V  F  P  K  *  *  Y  Y  R  V  I  S  I  Q  R  I  C  *  F  L  G  V  P  P  V  V  Q  S  I  V  G  L  R  F  F  L  S  H  I  L  M  L  N  G  S  S  W  Y  I  H  V  F  T  *  E  L  R  L  F  *  Q  G  L  P  W  *  Q  *  R  S  M  *  F  D  L  V  S  P  T  I  G  W  F  Q  I  S  C  T  R  D  I  L  I  F  R  H  L  C  N  E  L  </first_frame>
            <second_frame>  R  V  T  T  A  R  L  S  F  L  T  F  R  P  T  D  Y  C  S  M  P  F  N  T  L  C  L  E  R  N  C  L  *  A  T  S  Y  F  S  N  K  I  L  W  D  Y  R  Y  A  F  G  T  V  F  T  R  P  V  V  *  *   : E  F  *  V  S  L  M  *  N  A  S  R  S  T  C  S  L  L  Y  S  S  A  R  Q  P  H  N  F  C  K  E  A  T  *  M  Y  L  A  R  R  T  G  R  K  D  M  D  V  A  Q  M  S  A  M  S  S  G  Q  W  F  P  S  S  N  Q  E  G  S  N  V  *  C  C  L  G  V  V  I  W  E  I  F  G  T  Q  F  F  K  S  C  S  S  E  Q  G  C  K  L  W  S  S  S  S  P  G  L  S  P  V  L  W  :  V  W  E  N  G  S  L  F  S  I  C  S  C  S  C  L  F  C  L  S  P  T  S  K  T  R  I  *  L  *  *  S  G  V  D  S  E  R  R  *  *   : G  A  Q  K  G  *  C  V  V  C  *  G  V  Q  S  S  S  C  Q  V  G  K  I  L  C  *  *  Q  L  E  S  T  Q  D  K  *  A  D  H  R  D  G  R  N  I  R  E  G  E  N  *  V  *   : G  I  I  T  Q  G  T  *  Q  G  D  Q  S  W  S  A  Y  S  *  H  P  *  D  K  S  T  E  K  A  V  G  F  S  C  L  S  M  G  Q  T  F  D  T  S  F  Q  F  S  W  *  K  F  P  N  S  G  Q  F  D  T  T  E  G  E  T  P  Q  L  *  *  G  T  S  *  K  D  C  N  F  E  T  W  K  K  F  G  E  L  *  F  S  S  S  E  C  E  D  *  N  N  I  *  *  R  K  T  W  S  D  S  *  W  G  S  R  K  I  D  Y  *  *  E  P  N  S  R  E  R  L  R  D  F  L  C  Y  K  K  Y  R  R  W  *  C  T  G  T  W  K  K  C  Q  T  C  S  F  R  C  K  V  P  V  C  G  K  F  I  R  H  S  *  C  C  M  D  R  *  K  P  P  G  Y  *  R  A  *  Q  C  I  S  R  F  V  R  C  R  F  Y  C  F  D  W  S  F  S  K  Y  R  C  R  K  V  S  V  *  Q  K  W  G  *  N  T  S  F  I  C  *  V  *  Q  H  R  L  P  D  L  G  N  G  T  F  L  K  F  L  S  F  V  Q  Q  E  Y  H  S  K  S  T  I  C  C  *  I  E  *  A  *  S  C  L  Y  L  V  V  *  R  I  A  T  S  R  W  C  Q  A  S  Y  S  C  W  *  K  *  H  C  Y  S  S  L  *  *  *  A  D  K  Y  H  L  I  C  T  C  L  T  R  L  P  Q  S  N  V  R  *  I  S  K  P  E  R  K  S  Q  V  F  S  F  F  V  I  S  G  F  I  K  S  T  S  A  S  L  C  G  W  S  S  F  G  I  S  K  K  F  W  I  Y  Q  R  K  H  V  I  G  L  *  F  S  Q  L  K  H  G  S  T  S  I  Y  *  C  F  A  C  P  N  I  F  L  R  *  W  P  S  W  K  G  *  V  H  S  H  L  L  L  C  E  A  I  R  D  L  E  K  V  L  L  P  Q  *  I  R  L  Y  T  F  P  *  P  M  Q  K  M  G  C  S  G  W  E  E  Q  C  F  L  C  Q  N  L  G  R  P  I  Y  H  Q  A  G  N  E  D  R  V  G  V  I  Y  Q  V  C  T  S  L  L  *  V  F  I  *  L  N  S  *  W  E  P  N  L  L  G  K  D  S  G  D  L  P   : G  Y  I  K  A  S  Q  R  W  E  R  I  K  N  G  C  A  C  Y  G  K  S  S  F  *  A  Q  H  H  *  T  V  *  P  Q  R  V  V  S  I  T  L  *  S  R  F  K  W  K  *  Q  S  F  T  *  S  E  L  D  *  S  N  A  N  F  S  D  F  C  G  N  A  S  *  A  A  A  A  E  S  C  V  E  *  Y  F  I  S  S   : V  N  R  C  D  G  L  L  I  T  S  W  G  G  *  E  E  A  G  T  G  A  W  Y  Y  *  F  H  E  T  V  Y  V  G  Q  A  S  R  D  L  G  K  G  F  R  Y  S  R  W  A  E  E  C  S  P  N  G  D  F  S  K  A  I  Q  N  K  I  Q  E  S  N  V  Y  I  L  S  D  G  A  R  *  V  A  Y  M  K  *  Y  P  K  Y  Q  C  R  K  I  A  P  A  G  L  G  I  I  L  S  I  L  S  Y  A  I  K  F  C  V  F  C  A  G  M  L  G  S  C  F  I  I  R  G  L  L  L  F  F  Q  S  S  S  I  T  E  L  F  P  Y  K  E  F  V  S  F  W  A  F  R  Q  L  Y  S  Q  *  S  V  F  V  S  F  Y  P  T  F  *  C  S  M  E  A  L  G  I  F  M  C  L  H  E  N  *  D  S  F  D  K  G  C  R  G  S  S  K  D  Q  C  N  L  I  L  *  V  L  Q  S  D  G  F  K  *  A  A  L  A  T  F  *  F  S  G  T  Y  A  M  S  C </second_frame>
            <third_frame>   G  S  L  Q  Q  D  Y  P  S  S  P  S  D  Q  L  I  I  V  V  C  L  S  T  R  C  V  W  K  G  T  V  C  E  P  P  H  I  S  R  I  K  F  Y  G  I  T  D  M  P  L  G  R  F  L  R  D  R  L  F  D  E  :  N  F  R  C  P  S  C  E  M  P  P  E  A  H  V  R  C  Y  T  H  R  Q  G  S  L  T  I  S  V  K  K  L  P  E  C  I  L  P  G  E  Q  E  G  K  I  W  M  W  H  R  C  L  R  C  P  R  D  N  G  F  P  P  P  T  R  R  V  V  M  S  N  A  A  W  G  L  S  F  G  K  F  L  E  L  S  F  S  N  H  A  A  A  S  R  V  A  S  C  G  H  L  L  H  R  D  C  L  R  F  Y  G :   F  G  K  M  V  A  C  F  R  Y  A  P  V  H  V  Y  S  V  F  L  P  P  P  K  L  E  F  S  Y  D  N  Q  E  W  I  Q  K  E  G  D  E  :  V  R  R  R  A  N  A  L  F  A  E  V  S  K  V  L  H  V  K  L  E  K  F  S  V  D  S  S  L  K  A  P  K  T  S  E  Q  I  T  E  M  E  E  I  L  E  K  E  K  T  E  F  E  :  G  L  L  R  K  A  L  S  R  E  I  K  V  G  Q  P  T  V  D  I  L  E  I  N  Q  L  R  R  Q  L  V  F  H  A  Y  L  W  D  R  R  L  I  H  L  S  S  S  H  G  K  N  S  R  T  P  G  S  L  T  Q  L  K  E  K  P  L  S  S  S  E  E  L  P  E  R  T  A  I  L  R  P  G  K  S  L  G  S  Y  D  S  A  L  Q  N  V  K  T  E  I  T  S  S  E  G  R  H  G  Q  I  P  D  G  V  H  E  R  L  T  T  D  E  N  L  T  H  G  K  D  C  E  I  F  C  A  I  R  N  T  G  D  G  N  V  L  E  P  G  K  N  V  R  R  V  L  S  D  A  K  F  P  S  V  G  S  L  S  D  T  L  D  A  A  W  T  G  E  S  H  L  A  I  K  E  H  N  S  A  F  P  G  S  F  V  V  D  S  T  A  L  T  G  V  S  A  N  T  D  V  E  R  S  L  C  D  K  N  G  A  E  I  P  H  L  S  A  K  S  D  N  T  D  Y  L  T  W  A  T  A  H  F  S  N  F  Y  R  S  F  N  K  N  I  T  A  N  P  Q  Y  V  A  K  L  N  E  H  N  P  V  Y  I  L  S  F  S  E  L  L  H  Q  G  G  A  R  L  L  T  A  V  G  E  N  D  I  V  I  P  V  Y  D  D  E  P  T  S  I  I  S  Y  A  L  V  S  P  D  Y  R  N  Q  M  S  D  E  S  Q  N  L  K  E  N  H  K  F  S  A  S  L  S  F  L  D  S  L  N  L  L  P  L  H  S  V  D  G  V  V  S  E  S  P  R  S  F  G  S  T  N  E  S  M  S  S  G  Y  S  S  R  S  S  N  M  D  P  P  A  Y  I  N  A  L  H  A  R  I  S  F  S  D  D  G  P  P  G  K  V  K  Y  T  V  T  C  Y  Y  A  K  Q  F  E  T  L  R  K  S  C  C  P  N  E  S  D  F  I  R  S  L  S  R  C  K  K  W  G  A  Q  G  G  K  S  N  V  F  F  A  K  T  L  D  D  R  F  I  I  K  Q  V  T  K  T  E  L  E  S  F  I  K  F  A  P  A  Y  F  K  Y  L  S  D  S  I  A  S  G  S  P  T  C  L  A  K  I  L  G  I  Y  Q  :  V  T  S  K  H  L  K  G  G  K  E  S  R  M  D  V  L  V  M  E  N  L  L  F  K  R  N  I  T  R  L  Y  D  L  K  G  S  S  R  S  R  Y  N  P  D  S  S  G  S  N  K  V  L  L  D  Q  N  L  I  E  A  M  P  T  S  P  I  F  V  G  T  Q  A  K  R  L  L  Q  R  A  V  W  N  D  T  S  F  L  A  :  S  I  D  V  M  D  Y  S  L  L  V  G  V  D  E  K  K  Q  E  L  V  L  G  I  I  D  F  M  R  Q  Y  T  W  D  K  H  L  E  T  W  V  K  A  S  G  I  L  G  G  P  K  N  A  A  P  T  V  I  S  P  K  Q  Y  K  I  R  F  R  K  A  M  S  T  Y  F  L  M  V  P  D  E  W  P  T  *  S  D  T  P  S  I  S  A  E  K  L  P  R  P  V  L  V  *  F  Y  P  S  F  L  M  P  S  S  F  V  Y  F  V  Q  E  C  W  V  V  A  L  S  L  E  D  Y  F  C  F  S  K  V  V  V  L  Q  S  Y  F  H  T  K  N  L  L  V  S  G  R  S  A  S  C  T  V  N  S  R  S  S  F  L  F  I  P  H  S  D  A  Q  W  K  L  L  V  Y  S  C  V  Y  M  R  I  E  T  L  L  T  R  A  A  V  V  A  V  K  I  N  V  I  *  S  C  K  S  Y  N  R  M  V  S  N  K  L  H  S  R  H  F  D  F  Q  A  P  M  Q  *  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLe0008H22.2" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16380" stop="16562"/>
                    <exon start="16662" stop="16993"/>
                    <exon start="19703" stop="19826"/>
                    <exon start="19912" stop="20070"/>
                    <exon start="21200" stop="22702"/>
                    <exon start="27695" stop="27961"/>
                    <exon start="28377" stop="28631"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>2820</number_coding_nucleotides>
                  <number_encoded_amino_acids>940</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GSLQQDYPSSPSDQLIIVVCLSTRCVWKGTVCEPPHISRIKFYGITDMPLGRFLRDRLFDENFRCPSCEMPPEAHVRCYTHRQGSLTISVKKLPECILPGEQEGKIWMWHRCLRCPRDNGFPPPTRRVVMSNAAWGLSFGKFLELSFSNHAAASRVASCGHLLHRDCLRFYGFGKMVACFRYAPVHVYSVFLPPPKLEFSYDNQEWIQKEGDEVRRRANALFAEVSKVLHVKLEKFSVDSSLKAPKTSEQITEMEEILEKEKTEFEGLLRKALSREIKVGQPTVDILEINQLRRQLVFHAYLWDRRLIHLSSSHGKNSRTPGSLTQLKEKPLSSSEELPERTAILRPGKSLGSYDSALQNVKTEITSSEGRHGQIPDGVHERLTTDENLTHGKDCEIFCAIRNTGDGNVLEPGKNVRRVLSDAKFPSVGSLSDTLDAAWTGESHLAIKEHNSAFPGSFVVDSTALTGVSANTDVERSLCDKNGAEIPHLSAKSDNTDYLTWATAHFSNFYRSFNKNITANPQYVAKLNEHNPVYILSFSELLHQGGARLLTAVGENDIVIPVYDDEPTSIISYALVSPDYRNQMSDESQNLKENHKFSASLSFLDSLNLLPLHSVDGVVSESPRSFGSTNESMSSGYSSRSSNMDPPAYINALHARISFSDDGPPGKVKYTVTCYYAKQFETLRKSCCPNESDFIRSLSRCKKWGAQGGKSNVFFAKTLDDRFIIKQVTKTELESFIKFAPAYFKYLSDSIASGSPTCLAKILGIYQVTSKHLKGGKESRMDVLVMENLLFKRNITRLYDLKGSSRSRYNPDSSGSNKVLLDQNLIEAMPTSPIFVGTQAKRLLQRAVWNDTSFLASIDVMDYSLLVGVDEKKQELVLGIIDFMRQYTWDKHLETWVKASGILGGPKNAAPTVISPKQYKIRFRKAMSTYFLMVPDEWPT*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07SLe0008H22.2" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28686" stop="28994"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>306</number_coding_nucleotides>
                  <number_encoded_amino_acids>102</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FYPSFLMPSSFVYFVQECWVVALSLEDYFCFSKVVVLQSYFHTKNLLVSGRSASCTVNSRSSFLFIPHSDAQWKLLVYSCVYMRIETLLTRAAVVAVKINVI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="16378" e_stop="16562"/>
            <exon e_start="16662" e_stop="16993"/>
            <exon e_start="19703" e_stop="19826"/>
            <exon e_start="19912" e_stop="20070"/>
            <exon e_start="21200" e_stop="22702"/>
            <exon e_start="27695" e_stop="27961"/>
            <exon e_start="28377" e_stop="28913"/>
            <exon e_start="30143" e_stop="30205"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.913" e_score="1.000"/>
          <exon-intron don_prob="0.569" acc_prob="0.915" e_score="0.997"/>
          <exon-intron don_prob="0.996" acc_prob="0.672" e_score="1.000"/>
          <exon-intron don_prob="0.758" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.997" e_score="0.996"/>
          <exon-intron don_prob="0.970" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.245" e_score="1.000"/>
          <exon-only e_score="0.587"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="16378" e_stop="16562" e_length="185"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.913">
            <gDNA_intron_boundary i_start="16563" i_stop="16661" i_length="99"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="16662" e_stop="16993" e_length="332"/>
          </exon>
          <intron i_serial="2" don_prob="0.569" acc_prob="0.915">
            <gDNA_intron_boundary i_start="16994" i_stop="19702" i_length="2709"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="19703" e_stop="19826" e_length="124"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.672">
            <gDNA_intron_boundary i_start="19827" i_stop="19911" i_length="85"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="19912" e_stop="20070" e_length="159"/>
          </exon>
          <intron i_serial="4" don_prob="0.758" acc_prob="0.999">
            <gDNA_intron_boundary i_start="20071" i_stop="21199" i_length="1129"/>
          </intron>
          <exon e_serial="5" e_score="0.996">
            <gDNA_exon_boundary e_start="21200" e_stop="22702" e_length="1503"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.997">
            <gDNA_intron_boundary i_start="22703" i_stop="27694" i_length="4992"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="27695" e_stop="27961" e_length="267"/>
          </exon>
          <intron i_serial="6" don_prob="0.970" acc_prob="0.981">
            <gDNA_intron_boundary i_start="27962" i_stop="28376" i_length="415"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="28377" e_stop="28913" e_length="537"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.245">
            <gDNA_intron_boundary i_start="28914" i_stop="30142" i_length="1229"/>
          </intron>
          <exon e_serial="8" e_score="0.587">
            <gDNA_exon_boundary e_start="30143" e_stop="30205" e_length="63"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16378" stop="16562"/>
              <exon start="16662" stop="16993"/>
              <exon start="19703" stop="19775"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369112" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16378" stop="16562"/>
              <exon start="16662" stop="16930"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246289" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16822" stop="16993"/>
              <exon start="19703" stop="19826"/>
              <exon start="19912" stop="20070"/>
              <exon start="21200" stop="21558"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703519" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16892" stop="16993"/>
              <exon start="19703" stop="19826"/>
              <exon start="19912" stop="20070"/>
              <exon start="21200" stop="21648"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E701704" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16906" stop="16993"/>
              <exon start="19703" stop="19826"/>
              <exon start="19912" stop="20070"/>
              <exon start="21200" stop="21567"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E263582" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19920" stop="20070"/>
              <exon start="21200" stop="21581"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293047" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21214" stop="21902"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E576695" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21376" stop="22164"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261101" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21380" stop="21637"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264225" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21469" stop="22129"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248090" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21469" stop="21995"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244238" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21749" stop="22428"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E556203" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21810" stop="22188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252657" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21822" stop="22514"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333991" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21895" stop="22678"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459449" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21895" stop="22677"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459418" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21919" stop="22702"/>
              <exon start="27695" stop="27739"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E602914" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22064" stop="22602"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E570570" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22093" stop="22702"/>
              <exon start="27695" stop="27777"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575819" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22190" stop="22653"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22253" stop="22702"/>
              <exon start="27695" stop="27961"/>
              <exon start="28377" stop="28419"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704949" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22348" stop="22702"/>
              <exon start="27695" stop="27961"/>
              <exon start="28377" stop="28639"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707731" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22476" stop="22702"/>
              <exon start="27695" stop="27961"/>
              <exon start="28377" stop="28605"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E433992" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22476" stop="22702"/>
              <exon start="27695" stop="27938"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404541" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27713" stop="27961"/>
              <exon start="28377" stop="28718"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E394967" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27714" stop="27961"/>
              <exon start="28377" stop="28759"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249579" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28475" stop="28913"/>
              <exon start="30143" stop="30205"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249945" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAGGGTCACTACAGCAAGATTATCCTTCCTCACCTTCCGACCAACTGATTATTGTAGTATGCCTTTCAACACGCTGTGTTTGGAAAGGAACTGTTTGTGAGCCACCTCATATTTCTCGAATAAAATTTTATGGGATTACCGATATGCCTTTGGGACGGTTTTTACGAGACCGGTTGTTTGATGAG : AATTTTAGGTGTCCCTCATGTGAAATGCCTCCAGAAGCACATGTTCGTTGCTATACTCATCGGCAAGGCAGCCTCACAATTTCTGTAAAGAAGCTACCTGAATGTATCTTGCCAGGAGAACAGGAAGGAAAGATATGGATGTGGCACAGATGTCTGCGATGTCCTCGGGACAATGGTTTCCCTCCTCCAACCAGGAGGGTAGTAATGTCTAATGCTGCTTGGGGGTTGTCATTTGGGAAATTTTTGGAACTCAGTTTTTCAAATCATGCAGCAGCGAGCAGGGTTGCAAGTTGTGGTCATCTTCTTCACCGGGACTGTCTCCGGTTCTATGG : GTTTGGGAAAATGGTAGCTTGTTTTCGATATGCTCCTGTTCATGTTTATTCTGTCTTTCTCCCACCTCCAAAACTCGAATTTAGCTATGATAATCAGGAGTGGATTCAGAAAGAAGGTGATGAG : GTGCGCAGAAGGGCTAATGCGTTGTTTGCTGAGGTGTCCAAAGTTCTTCATGTCAAGTTGGAAAAATTCTCTGTTGATAGCAGCTTGAAAGCACCCAAGACAAGTGAGCAGATCACAGAGATGGAAGAAATATTAGAGAAGGAGAAAACTGAGTTTGAG : GGATTATTACGCAAGGCACTTAGCAGGGAGATCAAAGTTGGTCAGCCTACAGTTGACATCCTTGAGATAAATCAACTGAGAAGGCAGTTGGTTTTTCATGCTTATCTATGGGACAGACGTTTGATACATCTTTCCAGTTCTCATGGTAAAAATTCCCGAACTCCGGGCAGTTTGACACAACTGAAGGAGAAACCCCTCAGCTCTAGTGAGGAACTTCCTGAAAGGACTGCAATTTTGAGACCTGGAAAAAGTTTGGGGAGCTATGATTCAGCTCTTCAGAATGTGAAGACTGAAATAACATCTAGTGAAGGAAGACATGGTCAGATTCCTGATGGGGTTCACGAAAGATTGACTACTGATGAGAACCTAACTCACGGGAAAGACTGCGAGATTTTCTGTGCTATAAGAAATACAGGAGATGGTAATGTACTGGAACCTGGAAAAAATGTCAGACGTGTTCTTTCAGATGCAAAGTTCCCGTCTGTGGGAAGTTTATCCGACACTCTTGATGCTGCATGGACCGGTGAAAGCCACCTGGCTATTAAAGAGCATAACAGTGCATTTCCAGGTTCGTTCGTTGTAGATTCTACTGCTTTGACTGGAGTTTCAGCAAATACAGATGTCGAAAGGTCTCTGTGTGACAAAAATGGGGCTGAAATACCTCATTTATCTGCTAAGTCTGACAACACAGATTACCTGACCTGGGCAACGGCACATTTCTCAAATTTCTATCGTTCGTTCAACAAGAATATCACAGCAAATCCACAATATGTTGCTAAATTGAATGAGCATAATCCTGTTTATATCTTGTCGTTTAGCGAATTGCTACATCAAGGTGGTGCCAGGCTTCTTACAGCTGTTGGTGAAAATGACATTGTTATTCCAGTTTATGATGATGAGCCGACAAGTATCATCTCATATGCACTTGTCTCACCAGATTACCGCAATCAAATGTCAGATGAATCTCAAAACCTGAAAGAAAATCACAAGTTTTCAGCTTCTTTGTCATTTCTGGATTCATTAAATCTACTTCCGCTTCACTCTGTGGATGGAGTAGTTTCGGAATCTCCAAGAAGTTTTGGATCTACCAACGAAAGCATGTCATCGGGTTATAGTTCTCGCAGCTCAAACATGGATCCACCAGCATATATTAATGCTTTGCATGCCCGAATATCTTTCTCAGATGATGGCCCTCCTGGAAAGGTTAAGTACACAGTCACCTGCTATTATGCGAAGCAATTCGAGACCTTGAGAAAGTCTTGTTGCCCCAATGAATCAGACTTTATACGTTCCCTTAGCCGATGCAAAAAATGGGGTGCTCAGGGTGGGAAGAGCAATGTTTTCTTTGCCAAAACCTTGGACGACCGATTTATCATCAAGCAGGTAACGAAGACAGAGTTGGAGTCATTTATCAAGTTTGCACCAGCTTACTTTAAGTATTTATCTGACTCAATAGCTAGTGGGAGCCCAACTTGCTTGGCAAAGATTCTGGGGATCTACCAG : GTTACATCAAAGCATCTCAAAGGTGGGAAAGAATCAAGAATGGATGTGCTTGTTATGGAAAATCTTCTTTTTAAGCGCAACATCACTAGACTGTATGACCTCAAAGGGTCGTCTCGATCACGCTATAATCCAGATTCAAGTGGAAGTAACAAAGTTTTACTTGATCAGAACTTGATTGAAGCAATGCCAACTTCTCCGATTTTTGTGGGAACGCAAGCTAAGCGGCTGCTGCAGAGAGCTGTGTGGAATGATACTTCATTTCTAGCG : TCAATAGATGTGATGGATTACTCATTACTAGTTGGGGTGGATGAGAAGAAGCAGGAACTGGTGCTTGGTATTATTGATTTCATGAGACAGTATACGTGGGACAAGCATCTCGAGACTTGGGTAAAGGCTTCAGGTATTCTAGGTGGGCCGAAGAATGCAGCCCCAACGGTGATTTCTCCAAAGCAATACAAAATAAGATTCAGGAAAGCAATGTCTACATACTTTCTGATGGTGCCAGATGAGTGGCCTACATGAAGTGATACCCCAAGTATCAGTGCAGAAAAATTGCCCCGGCCGGTCTTGGTATAATTTTATCCATCCTTTCTTATGCCATCAAGTTTTGTGTATTTTGTGCAGGAATGTTGGGTAGTTGCTTTATCATTAGAGGATTACTTTTGTTTTTCCAAAGTAGTAGTATTACAGAGTTATTTCCATACAAAGAATTTGTTAGTTTCTGGGCGTTCCGCCAGTTGTACAGTCAATAGTCGGTCTTCGTTTCTTTTTATCCCACATTCTGATGCTCAATGGAAGCTCTTG : GTAAAGGAAAATCAAGAAGAAGTCAAAGGCTACTTAGTGAGGTTGATACTTCGAATATGAAAG</gDNA_template>
            <first_frame> *  G  H  Y  S  K  I  I  L  P  H  L  P  T  N  *  L  L  *  Y  A  F  Q  H  A  V  F  G  K  E  L  F  V  S  H  L  I  F  L  E  *  N  F  M  G  L  P  I  C  L  W  D  G  F  Y  E  T  G  C  L  M  R :   I  L  G  V  P  H  V  K  C  L  Q  K  H  M  F  V  A  I  L  I  G  K  A  A  S  Q  F  L  *  R  S  Y  L  N  V  S  C  Q  E  N  R  K  E  R  Y  G  C  G  T  D  V  C  D  V  L  G  T  M  V  S  L  L  Q  P  G  G  *  *  C  L  M  L  L  G  G  C  H  L  G  N  F  W  N  S  V  F  Q  I  M  Q  Q  R  A  G  L  Q  V  V  V  I  F  F  T  G  T  V  S  G  S  M   : G  L  G  K  W  *  L  V  F  D  M  L  L  F  M  F  I  L  S  F  S  H  L  Q  N  S  N  L  A  M  I  I  R  S  G  F  R  K  K  V  M  R :   C  A  E  G  L  M  R  C  L  L  R  C  P  K  F  F  M  S  S  W  K  N  S  L  L  I  A  A  *  K  H  P  R  Q  V  S  R  S  Q  R  W  K  K  Y  *  R  R  R  K  L  S  L  R :   D  Y  Y  A  R  H  L  A  G  R  S  K  L  V  S  L  Q  L  T  S  L  R  *  I  N  *  E  G  S  W  F  F  M  L  I  Y  G  T  D  V  *  Y  I  F  P  V  L  M  V  K  I  P  E  L  R  A  V  *  H  N  *  R  R  N  P  S  A  L  V  R  N  F  L  K  G  L  Q  F  *  D  L  E  K  V  W  G  A  M  I  Q  L  F  R  M  *  R  L  K  *  H  L  V  K  E  D  M  V  R  F  L  M  G  F  T  K  D  *  L  L  M  R  T  *  L  T  G  K  T  A  R  F  S  V  L  *  E  I  Q  E  M  V  M  Y  W  N  L  E  K  M  S  D  V  F  F  Q  M  Q  S  S  R  L  W  E  V  Y  P  T  L  L  M  L  H  G  P  V  K  A  T  W  L  L  K  S  I  T  V  H  F  Q  V  R  S  L  *  I  L  L  L  *  L  E  F  Q  Q  I  Q  M  S  K  G  L  C  V  T  K  M  G  L  K  Y  L  I  Y  L  L  S  L  T  T  Q  I  T  *  P  G  Q  R  H  I  S  Q  I  S  I  V  R  S  T  R  I  S  Q  Q  I  H  N  M  L  L  N  *  M  S  I  I  L  F  I  S  C  R  L  A  N  C  Y  I  K  V  V  P  G  F  L  Q  L  L  V  K  M  T  L  L  F  Q  F  M  M  M  S  R  Q  V  S  S  H  M  H  L  S  H  Q  I  T  A  I  K  C  Q  M  N  L  K  T  *  K  K  I  T  S  F  Q  L  L  C  H  F  W  I  H  *  I  Y  F  R  F  T  L  W  M  E  *  F  R  N  L  Q  E  V  L  D  L  P  T  K  A  C  H  R  V  I  V  L  A  A  Q  T  W  I  H  Q  H  I  L  M  L  C  M  P  E  Y  L  S  Q  M  M  A  L  L  E  R  L  S  T  Q  S  P  A  I  M  R  S  N  S  R  P  *  E  S  L  V  A  P  M  N  Q  T  L  Y  V  P  L  A  D  A  K  N  G  V  L  R  V  G  R  A  M  F  S  L  P  K  P  W  T  T  D  L  S  S  S  R  *  R  R  Q  S  W  S  H  L  S  S  L  H  Q  L  T  L  S  I  Y  L  T  Q  *  L  V  G  A  Q  L  A  W  Q  R  F  W  G  S  T  R :   L  H  Q  S  I  S  K  V  G  K  N  Q  E  W  M  C  L  L  W  K  I  F  F  L  S  A  T  S  L  D  C  M  T  S  K  G  R  L  D  H  A  I  I  Q  I  Q  V  E  V  T  K  F  Y  L  I  R  T  *  L  K  Q  C  Q  L  L  R  F  L  W  E  R  K  L  S  G  C  C  R  E  L  C  G  M  I  L  H  F  *  R :   Q  *  M  *  W  I  T  H  Y  *  L  G  W  M  R  R  S  R  N  W  C  L  V  L  L  I  S  *  D  S  I  R  G  T  S  I  S  R  L  G  *  R  L  Q  V  F  *  V  G  R  R  M  Q  P  Q  R  *  F  L  Q  S  N  T  K  *  D  S  G  K  Q  C  L  H  T  F  *  W  C  Q  M  S  G  L  H  E  V  I  P  Q  V  S  V  Q  K  N  C  P  G  R  S  W  Y  N  F  I  H  P  F  L  C  H  Q  V  L  C  I  L  C  R  N  V  G  *  L  L  Y  H  *  R  I  T  F  V  F  P  K  *  *  Y  Y  R  V  I  S  I  Q  R  I  C  *  F  L  G  V  P  P  V  V  Q  S  I  V  G  L  R  F  F  L  S  H  I  L  M  L  N  G  S  S  W :   *  R  K  I  K  K  K  S  K  A  T  *  *  G  *  Y  F  E  Y  E   </first_frame>
            <second_frame>  R  V  T  T  A  R  L  S  F  L  T  F  R  P  T  D  Y  C  S  M  P  F  N  T  L  C  L  E  R  N  C  L  *  A  T  S  Y  F  S  N  K  I  L  W  D  Y  R  Y  A  F  G  T  V  F  T  R  P  V  V  *  *   : E  F  *  V  S  L  M  *  N  A  S  R  S  T  C  S  L  L  Y  S  S  A  R  Q  P  H  N  F  C  K  E  A  T  *  M  Y  L  A  R  R  T  G  R  K  D  M  D  V  A  Q  M  S  A  M  S  S  G  Q  W  F  P  S  S  N  Q  E  G  S  N  V  *  C  C  L  G  V  V  I  W  E  I  F  G  T  Q  F  F  K  S  C  S  S  E  Q  G  C  K  L  W  S  S  S  S  P  G  L  S  P  V  L  W  :  V  W  E  N  G  S  L  F  S  I  C  S  C  S  C  L  F  C  L  S  P  T  S  K  T  R  I  *  L  *  *  S  G  V  D  S  E  R  R  *  *   : G  A  Q  K  G  *  C  V  V  C  *  G  V  Q  S  S  S  C  Q  V  G  K  I  L  C  *  *  Q  L  E  S  T  Q  D  K  *  A  D  H  R  D  G  R  N  I  R  E  G  E  N  *  V  *   : G  I  I  T  Q  G  T  *  Q  G  D  Q  S  W  S  A  Y  S  *  H  P  *  D  K  S  T  E  K  A  V  G  F  S  C  L  S  M  G  Q  T  F  D  T  S  F  Q  F  S  W  *  K  F  P  N  S  G  Q  F  D  T  T  E  G  E  T  P  Q  L  *  *  G  T  S  *  K  D  C  N  F  E  T  W  K  K  F  G  E  L  *  F  S  S  S  E  C  E  D  *  N  N  I  *  *  R  K  T  W  S  D  S  *  W  G  S  R  K  I  D  Y  *  *  E  P  N  S  R  E  R  L  R  D  F  L  C  Y  K  K  Y  R  R  W  *  C  T  G  T  W  K  K  C  Q  T  C  S  F  R  C  K  V  P  V  C  G  K  F  I  R  H  S  *  C  C  M  D  R  *  K  P  P  G  Y  *  R  A  *  Q  C  I  S  R  F  V  R  C  R  F  Y  C  F  D  W  S  F  S  K  Y  R  C  R  K  V  S  V  *  Q  K  W  G  *  N  T  S  F  I  C  *  V  *  Q  H  R  L  P  D  L  G  N  G  T  F  L  K  F  L  S  F  V  Q  Q  E  Y  H  S  K  S  T  I  C  C  *  I  E  *  A  *  S  C  L  Y  L  V  V  *  R  I  A  T  S  R  W  C  Q  A  S  Y  S  C  W  *  K  *  H  C  Y  S  S  L  *  *  *  A  D  K  Y  H  L  I  C  T  C  L  T  R  L  P  Q  S  N  V  R  *  I  S  K  P  E  R  K  S  Q  V  F  S  F  F  V  I  S  G  F  I  K  S  T  S  A  S  L  C  G  W  S  S  F  G  I  S  K  K  F  W  I  Y  Q  R  K  H  V  I  G  L  *  F  S  Q  L  K  H  G  S  T  S  I  Y  *  C  F  A  C  P  N  I  F  L  R  *  W  P  S  W  K  G  *  V  H  S  H  L  L  L  C  E  A  I  R  D  L  E  K  V  L  L  P  Q  *  I  R  L  Y  T  F  P  *  P  M  Q  K  M  G  C  S  G  W  E  E  Q  C  F  L  C  Q  N  L  G  R  P  I  Y  H  Q  A  G  N  E  D  R  V  G  V  I  Y  Q  V  C  T  S  L  L  *  V  F  I  *  L  N  S  *  W  E  P  N  L  L  G  K  D  S  G  D  L  P   : G  Y  I  K  A  S  Q  R  W  E  R  I  K  N  G  C  A  C  Y  G  K  S  S  F  *  A  Q  H  H  *  T  V  *  P  Q  R  V  V  S  I  T  L  *  S  R  F  K  W  K  *  Q  S  F  T  *  S  E  L  D  *  S  N  A  N  F  S  D  F  C  G  N  A  S  *  A  A  A  A  E  S  C  V  E  *  Y  F  I  S  S   : V  N  R  C  D  G  L  L  I  T  S  W  G  G  *  E  E  A  G  T  G  A  W  Y  Y  *  F  H  E  T  V  Y  V  G  Q  A  S  R  D  L  G  K  G  F  R  Y  S  R  W  A  E  E  C  S  P  N  G  D  F  S  K  A  I  Q  N  K  I  Q  E  S  N  V  Y  I  L  S  D  G  A  R  *  V  A  Y  M  K  *  Y  P  K  Y  Q  C  R  K  I  A  P  A  G  L  G  I  I  L  S  I  L  S  Y  A  I  K  F  C  V  F  C  A  G  M  L  G  S  C  F  I  I  R  G  L  L  L  F  F  Q  S  S  S  I  T  E  L  F  P  Y  K  E  F  V  S  F  W  A  F  R  Q  L  Y  S  Q  *  S  V  F  V  S  F  Y  P  T  F  *  C  S  M  E  A  L   : G  K  G  K  S  R  R  S  Q  R  L  L  S  E  V  D  T  S  N  M  K  </second_frame>
            <third_frame>   G  S  L  Q  Q  D  Y  P  S  S  P  S  D  Q  L  I  I  V  V  C  L  S  T  R  C  V  W  K  G  T  V  C  E  P  P  H  I  S  R  I  K  F  Y  G  I  T  D  M  P  L  G  R  F  L  R  D  R  L  F  D  E  :  N  F  R  C  P  S  C  E  M  P  P  E  A  H  V  R  C  Y  T  H  R  Q  G  S  L  T  I  S  V  K  K  L  P  E  C  I  L  P  G  E  Q  E  G  K  I  W  M  W  H  R  C  L  R  C  P  R  D  N  G  F  P  P  P  T  R  R  V  V  M  S  N  A  A  W  G  L  S  F  G  K  F  L  E  L  S  F  S  N  H  A  A  A  S  R  V  A  S  C  G  H  L  L  H  R  D  C  L  R  F  Y  G :   F  G  K  M  V  A  C  F  R  Y  A  P  V  H  V  Y  S  V  F  L  P  P  P  K  L  E  F  S  Y  D  N  Q  E  W  I  Q  K  E  G  D  E  :  V  R  R  R  A  N  A  L  F  A  E  V  S  K  V  L  H  V  K  L  E  K  F  S  V  D  S  S  L  K  A  P  K  T  S  E  Q  I  T  E  M  E  E  I  L  E  K  E  K  T  E  F  E  :  G  L  L  R  K  A  L  S  R  E  I  K  V  G  Q  P  T  V  D  I  L  E  I  N  Q  L  R  R  Q  L  V  F  H  A  Y  L  W  D  R  R  L  I  H  L  S  S  S  H  G  K  N  S  R  T  P  G  S  L  T  Q  L  K  E  K  P  L  S  S  S  E  E  L  P  E  R  T  A  I  L  R  P  G  K  S  L  G  S  Y  D  S  A  L  Q  N  V  K  T  E  I  T  S  S  E  G  R  H  G  Q  I  P  D  G  V  H  E  R  L  T  T  D  E  N  L  T  H  G  K  D  C  E  I  F  C  A  I  R  N  T  G  D  G  N  V  L  E  P  G  K  N  V  R  R  V  L  S  D  A  K  F  P  S  V  G  S  L  S  D  T  L  D  A  A  W  T  G  E  S  H  L  A  I  K  E  H  N  S  A  F  P  G  S  F  V  V  D  S  T  A  L  T  G  V  S  A  N  T  D  V  E  R  S  L  C  D  K  N  G  A  E  I  P  H  L  S  A  K  S  D  N  T  D  Y  L  T  W  A  T  A  H  F  S  N  F  Y  R  S  F  N  K  N  I  T  A  N  P  Q  Y  V  A  K  L  N  E  H  N  P  V  Y  I  L  S  F  S  E  L  L  H  Q  G  G  A  R  L  L  T  A  V  G  E  N  D  I  V  I  P  V  Y  D  D  E  P  T  S  I  I  S  Y  A  L  V  S  P  D  Y  R  N  Q  M  S  D  E  S  Q  N  L  K  E  N  H  K  F  S  A  S  L  S  F  L  D  S  L  N  L  L  P  L  H  S  V  D  G  V  V  S  E  S  P  R  S  F  G  S  T  N  E  S  M  S  S  G  Y  S  S  R  S  S  N  M  D  P  P  A  Y  I  N  A  L  H  A  R  I  S  F  S  D  D  G  P  P  G  K  V  K  Y  T  V  T  C  Y  Y  A  K  Q  F  E  T  L  R  K  S  C  C  P  N  E  S  D  F  I  R  S  L  S  R  C  K  K  W  G  A  Q  G  G  K  S  N  V  F  F  A  K  T  L  D  D  R  F  I  I  K  Q  V  T  K  T  E  L  E  S  F  I  K  F  A  P  A  Y  F  K  Y  L  S  D  S  I  A  S  G  S  P  T  C  L  A  K  I  L  G  I  Y  Q  :  V  T  S  K  H  L  K  G  G  K  E  S  R  M  D  V  L  V  M  E  N  L  L  F  K  R  N  I  T  R  L  Y  D  L  K  G  S  S  R  S  R  Y  N  P  D  S  S  G  S  N  K  V  L  L  D  Q  N  L  I  E  A  M  P  T  S  P  I  F  V  G  T  Q  A  K  R  L  L  Q  R  A  V  W  N  D  T  S  F  L  A  :  S  I  D  V  M  D  Y  S  L  L  V  G  V  D  E  K  K  Q  E  L  V  L  G  I  I  D  F  M  R  Q  Y  T  W  D  K  H  L  E  T  W  V  K  A  S  G  I  L  G  G  P  K  N  A  A  P  T  V  I  S  P  K  Q  Y  K  I  R  F  R  K  A  M  S  T  Y  F  L  M  V  P  D  E  W  P  T  *  S  D  T  P  S  I  S  A  E  K  L  P  R  P  V  L  V  *  F  Y  P  S  F  L  M  P  S  S  F  V  Y  F  V  Q  E  C  W  V  V  A  L  S  L  E  D  Y  F  C  F  S  K  V  V  V  L  Q  S  Y  F  H  T  K  N  L  L  V  S  G  R  S  A  S  C  T  V  N  S  R  S  S  F  L  F  I  P  H  S  D  A  Q  W  K  L  L  :  V  K  E  N  Q  E  E  V  K  G  Y  L  V  R  L  I  L  R  I  *  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLe0008H22.2" strand="+"/>
                <serials PGL_serial="1" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16380" stop="16562"/>
                    <exon start="16662" stop="16993"/>
                    <exon start="19703" stop="19826"/>
                    <exon start="19912" stop="20070"/>
                    <exon start="21200" stop="22702"/>
                    <exon start="27695" stop="27961"/>
                    <exon start="28377" stop="28631"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>2820</number_coding_nucleotides>
                  <number_encoded_amino_acids>940</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GSLQQDYPSSPSDQLIIVVCLSTRCVWKGTVCEPPHISRIKFYGITDMPLGRFLRDRLFDENFRCPSCEMPPEAHVRCYTHRQGSLTISVKKLPECILPGEQEGKIWMWHRCLRCPRDNGFPPPTRRVVMSNAAWGLSFGKFLELSFSNHAAASRVASCGHLLHRDCLRFYGFGKMVACFRYAPVHVYSVFLPPPKLEFSYDNQEWIQKEGDEVRRRANALFAEVSKVLHVKLEKFSVDSSLKAPKTSEQITEMEEILEKEKTEFEGLLRKALSREIKVGQPTVDILEINQLRRQLVFHAYLWDRRLIHLSSSHGKNSRTPGSLTQLKEKPLSSSEELPERTAILRPGKSLGSYDSALQNVKTEITSSEGRHGQIPDGVHERLTTDENLTHGKDCEIFCAIRNTGDGNVLEPGKNVRRVLSDAKFPSVGSLSDTLDAAWTGESHLAIKEHNSAFPGSFVVDSTALTGVSANTDVERSLCDKNGAEIPHLSAKSDNTDYLTWATAHFSNFYRSFNKNITANPQYVAKLNEHNPVYILSFSELLHQGGARLLTAVGENDIVIPVYDDEPTSIISYALVSPDYRNQMSDESQNLKENHKFSASLSFLDSLNLLPLHSVDGVVSESPRSFGSTNESMSSGYSSRSSNMDPPAYINALHARISFSDDGPPGKVKYTVTCYYAKQFETLRKSCCPNESDFIRSLSRCKKWGAQGGKSNVFFAKTLDDRFIIKQVTKTELESFIKFAPAYFKYLSDSIASGSPTCLAKILGIYQVTSKHLKGGKESRMDVLVMENLLFKRNITRLYDLKGSSRSRYNPDSSGSNKVLLDQNLIEAMPTSPIFVGTQAKRLLQRAVWNDTSFLASIDVMDYSLLVGVDEKKQELVLGIIDFMRQYTWDKHLETWVKASGILGGPKNAAPTVISPKQYKIRFRKAMSTYFLMVPDEWPT*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07SLe0008H22.2" strand="+"/>
                <serials PGL_serial="1" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28686" stop="28913"/>
                    <exon start="30143" stop="30202"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>285</number_coding_nucleotides>
                  <number_encoded_amino_acids>95</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FYPSFLMPSSFVYFVQECWVVALSLEDYFCFSKVVVLQSYFHTKNLLVSGRSASCTVNSRSSFLFIPHSDAQWKLLVKENQEEVKGYLVRLILRI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="16378" e_stop="16562"/>
            <exon e_start="16662" e_stop="16993"/>
            <exon e_start="19703" e_stop="19826"/>
            <exon e_start="19912" e_stop="20070"/>
            <exon e_start="21200" e_stop="22702"/>
            <exon e_start="27695" e_stop="27961"/>
            <exon e_start="28377" e_stop="28880"/>
            <exon e_start="29462" e_stop="29486"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.913" e_score="1.000"/>
          <exon-intron don_prob="0.569" acc_prob="0.915" e_score="0.997"/>
          <exon-intron don_prob="0.996" acc_prob="0.672" e_score="1.000"/>
          <exon-intron don_prob="0.758" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.997" e_score="0.996"/>
          <exon-intron don_prob="0.970" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.988"/>
          <exon-only e_score="0.720"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="16378" e_stop="16562" e_length="185"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.913">
            <gDNA_intron_boundary i_start="16563" i_stop="16661" i_length="99"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="16662" e_stop="16993" e_length="332"/>
          </exon>
          <intron i_serial="2" don_prob="0.569" acc_prob="0.915">
            <gDNA_intron_boundary i_start="16994" i_stop="19702" i_length="2709"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="19703" e_stop="19826" e_length="124"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.672">
            <gDNA_intron_boundary i_start="19827" i_stop="19911" i_length="85"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="19912" e_stop="20070" e_length="159"/>
          </exon>
          <intron i_serial="4" don_prob="0.758" acc_prob="0.999">
            <gDNA_intron_boundary i_start="20071" i_stop="21199" i_length="1129"/>
          </intron>
          <exon e_serial="5" e_score="0.996">
            <gDNA_exon_boundary e_start="21200" e_stop="22702" e_length="1503"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.997">
            <gDNA_intron_boundary i_start="22703" i_stop="27694" i_length="4992"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="27695" e_stop="27961" e_length="267"/>
          </exon>
          <intron i_serial="6" don_prob="0.970" acc_prob="0.981">
            <gDNA_intron_boundary i_start="27962" i_stop="28376" i_length="415"/>
          </intron>
          <exon e_serial="7" e_score="0.988">
            <gDNA_exon_boundary e_start="28377" e_stop="28880" e_length="504"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="28881" i_stop="29461" i_length="581"/>
          </intron>
          <exon e_serial="8" e_score="0.720">
            <gDNA_exon_boundary e_start="29462" e_stop="29486" e_length="25"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16378" stop="16562"/>
              <exon start="16662" stop="16993"/>
              <exon start="19703" stop="19775"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369112" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16378" stop="16562"/>
              <exon start="16662" stop="16930"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246289" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16822" stop="16993"/>
              <exon start="19703" stop="19826"/>
              <exon start="19912" stop="20070"/>
              <exon start="21200" stop="21558"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703519" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16892" stop="16993"/>
              <exon start="19703" stop="19826"/>
              <exon start="19912" stop="20070"/>
              <exon start="21200" stop="21648"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E701704" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16906" stop="16993"/>
              <exon start="19703" stop="19826"/>
              <exon start="19912" stop="20070"/>
              <exon start="21200" stop="21567"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E263582" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19920" stop="20070"/>
              <exon start="21200" stop="21581"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293047" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21214" stop="21902"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E576695" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21376" stop="22164"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261101" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21380" stop="21637"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264225" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21469" stop="22129"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248090" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21469" stop="21995"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244238" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21749" stop="22428"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E556203" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21810" stop="22188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252657" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21822" stop="22514"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333991" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21895" stop="22678"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459449" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21895" stop="22677"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459418" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21919" stop="22702"/>
              <exon start="27695" stop="27739"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E602914" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22064" stop="22602"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E570570" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22093" stop="22702"/>
              <exon start="27695" stop="27777"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575819" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22190" stop="22653"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22253" stop="22702"/>
              <exon start="27695" stop="27961"/>
              <exon start="28377" stop="28419"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704949" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22348" stop="22702"/>
              <exon start="27695" stop="27961"/>
              <exon start="28377" stop="28639"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707731" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22476" stop="22702"/>
              <exon start="27695" stop="27961"/>
              <exon start="28377" stop="28605"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E433992" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22476" stop="22702"/>
              <exon start="27695" stop="27938"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404541" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27713" stop="27961"/>
              <exon start="28377" stop="28718"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E394967" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27714" stop="27961"/>
              <exon start="28377" stop="28759"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249579" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27877" stop="27961"/>
              <exon start="28377" stop="28880"/>
              <exon start="29462" stop="29486"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369111" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAGGGTCACTACAGCAAGATTATCCTTCCTCACCTTCCGACCAACTGATTATTGTAGTATGCCTTTCAACACGCTGTGTTTGGAAAGGAACTGTTTGTGAGCCACCTCATATTTCTCGAATAAAATTTTATGGGATTACCGATATGCCTTTGGGACGGTTTTTACGAGACCGGTTGTTTGATGAG : AATTTTAGGTGTCCCTCATGTGAAATGCCTCCAGAAGCACATGTTCGTTGCTATACTCATCGGCAAGGCAGCCTCACAATTTCTGTAAAGAAGCTACCTGAATGTATCTTGCCAGGAGAACAGGAAGGAAAGATATGGATGTGGCACAGATGTCTGCGATGTCCTCGGGACAATGGTTTCCCTCCTCCAACCAGGAGGGTAGTAATGTCTAATGCTGCTTGGGGGTTGTCATTTGGGAAATTTTTGGAACTCAGTTTTTCAAATCATGCAGCAGCGAGCAGGGTTGCAAGTTGTGGTCATCTTCTTCACCGGGACTGTCTCCGGTTCTATGG : GTTTGGGAAAATGGTAGCTTGTTTTCGATATGCTCCTGTTCATGTTTATTCTGTCTTTCTCCCACCTCCAAAACTCGAATTTAGCTATGATAATCAGGAGTGGATTCAGAAAGAAGGTGATGAG : GTGCGCAGAAGGGCTAATGCGTTGTTTGCTGAGGTGTCCAAAGTTCTTCATGTCAAGTTGGAAAAATTCTCTGTTGATAGCAGCTTGAAAGCACCCAAGACAAGTGAGCAGATCACAGAGATGGAAGAAATATTAGAGAAGGAGAAAACTGAGTTTGAG : GGATTATTACGCAAGGCACTTAGCAGGGAGATCAAAGTTGGTCAGCCTACAGTTGACATCCTTGAGATAAATCAACTGAGAAGGCAGTTGGTTTTTCATGCTTATCTATGGGACAGACGTTTGATACATCTTTCCAGTTCTCATGGTAAAAATTCCCGAACTCCGGGCAGTTTGACACAACTGAAGGAGAAACCCCTCAGCTCTAGTGAGGAACTTCCTGAAAGGACTGCAATTTTGAGACCTGGAAAAAGTTTGGGGAGCTATGATTCAGCTCTTCAGAATGTGAAGACTGAAATAACATCTAGTGAAGGAAGACATGGTCAGATTCCTGATGGGGTTCACGAAAGATTGACTACTGATGAGAACCTAACTCACGGGAAAGACTGCGAGATTTTCTGTGCTATAAGAAATACAGGAGATGGTAATGTACTGGAACCTGGAAAAAATGTCAGACGTGTTCTTTCAGATGCAAAGTTCCCGTCTGTGGGAAGTTTATCCGACACTCTTGATGCTGCATGGACCGGTGAAAGCCACCTGGCTATTAAAGAGCATAACAGTGCATTTCCAGGTTCGTTCGTTGTAGATTCTACTGCTTTGACTGGAGTTTCAGCAAATACAGATGTCGAAAGGTCTCTGTGTGACAAAAATGGGGCTGAAATACCTCATTTATCTGCTAAGTCTGACAACACAGATTACCTGACCTGGGCAACGGCACATTTCTCAAATTTCTATCGTTCGTTCAACAAGAATATCACAGCAAATCCACAATATGTTGCTAAATTGAATGAGCATAATCCTGTTTATATCTTGTCGTTTAGCGAATTGCTACATCAAGGTGGTGCCAGGCTTCTTACAGCTGTTGGTGAAAATGACATTGTTATTCCAGTTTATGATGATGAGCCGACAAGTATCATCTCATATGCACTTGTCTCACCAGATTACCGCAATCAAATGTCAGATGAATCTCAAAACCTGAAAGAAAATCACAAGTTTTCAGCTTCTTTGTCATTTCTGGATTCATTAAATCTACTTCCGCTTCACTCTGTGGATGGAGTAGTTTCGGAATCTCCAAGAAGTTTTGGATCTACCAACGAAAGCATGTCATCGGGTTATAGTTCTCGCAGCTCAAACATGGATCCACCAGCATATATTAATGCTTTGCATGCCCGAATATCTTTCTCAGATGATGGCCCTCCTGGAAAGGTTAAGTACACAGTCACCTGCTATTATGCGAAGCAATTCGAGACCTTGAGAAAGTCTTGTTGCCCCAATGAATCAGACTTTATACGTTCCCTTAGCCGATGCAAAAAATGGGGTGCTCAGGGTGGGAAGAGCAATGTTTTCTTTGCCAAAACCTTGGACGACCGATTTATCATCAAGCAGGTAACGAAGACAGAGTTGGAGTCATTTATCAAGTTTGCACCAGCTTACTTTAAGTATTTATCTGACTCAATAGCTAGTGGGAGCCCAACTTGCTTGGCAAAGATTCTGGGGATCTACCAG : GTTACATCAAAGCATCTCAAAGGTGGGAAAGAATCAAGAATGGATGTGCTTGTTATGGAAAATCTTCTTTTTAAGCGCAACATCACTAGACTGTATGACCTCAAAGGGTCGTCTCGATCACGCTATAATCCAGATTCAAGTGGAAGTAACAAAGTTTTACTTGATCAGAACTTGATTGAAGCAATGCCAACTTCTCCGATTTTTGTGGGAACGCAAGCTAAGCGGCTGCTGCAGAGAGCTGTGTGGAATGATACTTCATTTCTAGCG : TCAATAGATGTGATGGATTACTCATTACTAGTTGGGGTGGATGAGAAGAAGCAGGAACTGGTGCTTGGTATTATTGATTTCATGAGACAGTATACGTGGGACAAGCATCTCGAGACTTGGGTAAAGGCTTCAGGTATTCTAGGTGGGCCGAAGAATGCAGCCCCAACGGTGATTTCTCCAAAGCAATACAAAATAAGATTCAGGAAAGCAATGTCTACATACTTTCTGATGGTGCCAGATGAGTGGCCTACATGAAGTGATACCCCAAGTATCAGTGCAGAAAAATTGCCCCGGCCGGTCTTGGTATAATTTTATCCATCCTTTCTTATGCCATCAAGTTTTGTGTATTTTGTGCAGGAATGTTGGGTAGTTGCTTTATCATTAGAGGATTACTTTTGTTTTTCCAAAGTAGTAGTATTACAGAGTTATTTCCATACAAAGAATTTGTTAGTTTCTGGGCGTTCCGCCAGTTGTACAGTCAATAGTCGGTCTTCGTTTCTTTTT : AAAAATAAAATAAAATACGAGAACA</gDNA_template>
            <first_frame> *  G  H  Y  S  K  I  I  L  P  H  L  P  T  N  *  L  L  *  Y  A  F  Q  H  A  V  F  G  K  E  L  F  V  S  H  L  I  F  L  E  *  N  F  M  G  L  P  I  C  L  W  D  G  F  Y  E  T  G  C  L  M  R :   I  L  G  V  P  H  V  K  C  L  Q  K  H  M  F  V  A  I  L  I  G  K  A  A  S  Q  F  L  *  R  S  Y  L  N  V  S  C  Q  E  N  R  K  E  R  Y  G  C  G  T  D  V  C  D  V  L  G  T  M  V  S  L  L  Q  P  G  G  *  *  C  L  M  L  L  G  G  C  H  L  G  N  F  W  N  S  V  F  Q  I  M  Q  Q  R  A  G  L  Q  V  V  V  I  F  F  T  G  T  V  S  G  S  M   : G  L  G  K  W  *  L  V  F  D  M  L  L  F  M  F  I  L  S  F  S  H  L  Q  N  S  N  L  A  M  I  I  R  S  G  F  R  K  K  V  M  R :   C  A  E  G  L  M  R  C  L  L  R  C  P  K  F  F  M  S  S  W  K  N  S  L  L  I  A  A  *  K  H  P  R  Q  V  S  R  S  Q  R  W  K  K  Y  *  R  R  R  K  L  S  L  R :   D  Y  Y  A  R  H  L  A  G  R  S  K  L  V  S  L  Q  L  T  S  L  R  *  I  N  *  E  G  S  W  F  F  M  L  I  Y  G  T  D  V  *  Y  I  F  P  V  L  M  V  K  I  P  E  L  R  A  V  *  H  N  *  R  R  N  P  S  A  L  V  R  N  F  L  K  G  L  Q  F  *  D  L  E  K  V  W  G  A  M  I  Q  L  F  R  M  *  R  L  K  *  H  L  V  K  E  D  M  V  R  F  L  M  G  F  T  K  D  *  L  L  M  R  T  *  L  T  G  K  T  A  R  F  S  V  L  *  E  I  Q  E  M  V  M  Y  W  N  L  E  K  M  S  D  V  F  F  Q  M  Q  S  S  R  L  W  E  V  Y  P  T  L  L  M  L  H  G  P  V  K  A  T  W  L  L  K  S  I  T  V  H  F  Q  V  R  S  L  *  I  L  L  L  *  L  E  F  Q  Q  I  Q  M  S  K  G  L  C  V  T  K  M  G  L  K  Y  L  I  Y  L  L  S  L  T  T  Q  I  T  *  P  G  Q  R  H  I  S  Q  I  S  I  V  R  S  T  R  I  S  Q  Q  I  H  N  M  L  L  N  *  M  S  I  I  L  F  I  S  C  R  L  A  N  C  Y  I  K  V  V  P  G  F  L  Q  L  L  V  K  M  T  L  L  F  Q  F  M  M  M  S  R  Q  V  S  S  H  M  H  L  S  H  Q  I  T  A  I  K  C  Q  M  N  L  K  T  *  K  K  I  T  S  F  Q  L  L  C  H  F  W  I  H  *  I  Y  F  R  F  T  L  W  M  E  *  F  R  N  L  Q  E  V  L  D  L  P  T  K  A  C  H  R  V  I  V  L  A  A  Q  T  W  I  H  Q  H  I  L  M  L  C  M  P  E  Y  L  S  Q  M  M  A  L  L  E  R  L  S  T  Q  S  P  A  I  M  R  S  N  S  R  P  *  E  S  L  V  A  P  M  N  Q  T  L  Y  V  P  L  A  D  A  K  N  G  V  L  R  V  G  R  A  M  F  S  L  P  K  P  W  T  T  D  L  S  S  S  R  *  R  R  Q  S  W  S  H  L  S  S  L  H  Q  L  T  L  S  I  Y  L  T  Q  *  L  V  G  A  Q  L  A  W  Q  R  F  W  G  S  T  R :   L  H  Q  S  I  S  K  V  G  K  N  Q  E  W  M  C  L  L  W  K  I  F  F  L  S  A  T  S  L  D  C  M  T  S  K  G  R  L  D  H  A  I  I  Q  I  Q  V  E  V  T  K  F  Y  L  I  R  T  *  L  K  Q  C  Q  L  L  R  F  L  W  E  R  K  L  S  G  C  C  R  E  L  C  G  M  I  L  H  F  *  R :   Q  *  M  *  W  I  T  H  Y  *  L  G  W  M  R  R  S  R  N  W  C  L  V  L  L  I  S  *  D  S  I  R  G  T  S  I  S  R  L  G  *  R  L  Q  V  F  *  V  G  R  R  M  Q  P  Q  R  *  F  L  Q  S  N  T  K  *  D  S  G  K  Q  C  L  H  T  F  *  W  C  Q  M  S  G  L  H  E  V  I  P  Q  V  S  V  Q  K  N  C  P  G  R  S  W  Y  N  F  I  H  P  F  L  C  H  Q  V  L  C  I  L  C  R  N  V  G  *  L  L  Y  H  *  R  I  T  F  V  F  P  K  *  *  Y  Y  R  V  I  S  I  Q  R  I  C  *  F  L  G  V  P  P  V  V  Q  S  I  V  G  L  R  F  F  L :   K  I  K  *  N  T  R  T </first_frame>
            <second_frame>  R  V  T  T  A  R  L  S  F  L  T  F  R  P  T  D  Y  C  S  M  P  F  N  T  L  C  L  E  R  N  C  L  *  A  T  S  Y  F  S  N  K  I  L  W  D  Y  R  Y  A  F  G  T  V  F  T  R  P  V  V  *  *   : E  F  *  V  S  L  M  *  N  A  S  R  S  T  C  S  L  L  Y  S  S  A  R  Q  P  H  N  F  C  K  E  A  T  *  M  Y  L  A  R  R  T  G  R  K  D  M  D  V  A  Q  M  S  A  M  S  S  G  Q  W  F  P  S  S  N  Q  E  G  S  N  V  *  C  C  L  G  V  V  I  W  E  I  F  G  T  Q  F  F  K  S  C  S  S  E  Q  G  C  K  L  W  S  S  S  S  P  G  L  S  P  V  L  W  :  V  W  E  N  G  S  L  F  S  I  C  S  C  S  C  L  F  C  L  S  P  T  S  K  T  R  I  *  L  *  *  S  G  V  D  S  E  R  R  *  *   : G  A  Q  K  G  *  C  V  V  C  *  G  V  Q  S  S  S  C  Q  V  G  K  I  L  C  *  *  Q  L  E  S  T  Q  D  K  *  A  D  H  R  D  G  R  N  I  R  E  G  E  N  *  V  *   : G  I  I  T  Q  G  T  *  Q  G  D  Q  S  W  S  A  Y  S  *  H  P  *  D  K  S  T  E  K  A  V  G  F  S  C  L  S  M  G  Q  T  F  D  T  S  F  Q  F  S  W  *  K  F  P  N  S  G  Q  F  D  T  T  E  G  E  T  P  Q  L  *  *  G  T  S  *  K  D  C  N  F  E  T  W  K  K  F  G  E  L  *  F  S  S  S  E  C  E  D  *  N  N  I  *  *  R  K  T  W  S  D  S  *  W  G  S  R  K  I  D  Y  *  *  E  P  N  S  R  E  R  L  R  D  F  L  C  Y  K  K  Y  R  R  W  *  C  T  G  T  W  K  K  C  Q  T  C  S  F  R  C  K  V  P  V  C  G  K  F  I  R  H  S  *  C  C  M  D  R  *  K  P  P  G  Y  *  R  A  *  Q  C  I  S  R  F  V  R  C  R  F  Y  C  F  D  W  S  F  S  K  Y  R  C  R  K  V  S  V  *  Q  K  W  G  *  N  T  S  F  I  C  *  V  *  Q  H  R  L  P  D  L  G  N  G  T  F  L  K  F  L  S  F  V  Q  Q  E  Y  H  S  K  S  T  I  C  C  *  I  E  *  A  *  S  C  L  Y  L  V  V  *  R  I  A  T  S  R  W  C  Q  A  S  Y  S  C  W  *  K  *  H  C  Y  S  S  L  *  *  *  A  D  K  Y  H  L  I  C  T  C  L  T  R  L  P  Q  S  N  V  R  *  I  S  K  P  E  R  K  S  Q  V  F  S  F  F  V  I  S  G  F  I  K  S  T  S  A  S  L  C  G  W  S  S  F  G  I  S  K  K  F  W  I  Y  Q  R  K  H  V  I  G  L  *  F  S  Q  L  K  H  G  S  T  S  I  Y  *  C  F  A  C  P  N  I  F  L  R  *  W  P  S  W  K  G  *  V  H  S  H  L  L  L  C  E  A  I  R  D  L  E  K  V  L  L  P  Q  *  I  R  L  Y  T  F  P  *  P  M  Q  K  M  G  C  S  G  W  E  E  Q  C  F  L  C  Q  N  L  G  R  P  I  Y  H  Q  A  G  N  E  D  R  V  G  V  I  Y  Q  V  C  T  S  L  L  *  V  F  I  *  L  N  S  *  W  E  P  N  L  L  G  K  D  S  G  D  L  P   : G  Y  I  K  A  S  Q  R  W  E  R  I  K  N  G  C  A  C  Y  G  K  S  S  F  *  A  Q  H  H  *  T  V  *  P  Q  R  V  V  S  I  T  L  *  S  R  F  K  W  K  *  Q  S  F  T  *  S  E  L  D  *  S  N  A  N  F  S  D  F  C  G  N  A  S  *  A  A  A  A  E  S  C  V  E  *  Y  F  I  S  S   : V  N  R  C  D  G  L  L  I  T  S  W  G  G  *  E  E  A  G  T  G  A  W  Y  Y  *  F  H  E  T  V  Y  V  G  Q  A  S  R  D  L  G  K  G  F  R  Y  S  R  W  A  E  E  C  S  P  N  G  D  F  S  K  A  I  Q  N  K  I  Q  E  S  N  V  Y  I  L  S  D  G  A  R  *  V  A  Y  M  K  *  Y  P  K  Y  Q  C  R  K  I  A  P  A  G  L  G  I  I  L  S  I  L  S  Y  A  I  K  F  C  V  F  C  A  G  M  L  G  S  C  F  I  I  R  G  L  L  L  F  F  Q  S  S  S  I  T  E  L  F  P  Y  K  E  F  V  S  F  W  A  F  R  Q  L  Y  S  Q  *  S  V  F  V  S  F   : *  K  *  N  K  I  R  E   </second_frame>
            <third_frame>   G  S  L  Q  Q  D  Y  P  S  S  P  S  D  Q  L  I  I  V  V  C  L  S  T  R  C  V  W  K  G  T  V  C  E  P  P  H  I  S  R  I  K  F  Y  G  I  T  D  M  P  L  G  R  F  L  R  D  R  L  F  D  E  :  N  F  R  C  P  S  C  E  M  P  P  E  A  H  V  R  C  Y  T  H  R  Q  G  S  L  T  I  S  V  K  K  L  P  E  C  I  L  P  G  E  Q  E  G  K  I  W  M  W  H  R  C  L  R  C  P  R  D  N  G  F  P  P  P  T  R  R  V  V  M  S  N  A  A  W  G  L  S  F  G  K  F  L  E  L  S  F  S  N  H  A  A  A  S  R  V  A  S  C  G  H  L  L  H  R  D  C  L  R  F  Y  G :   F  G  K  M  V  A  C  F  R  Y  A  P  V  H  V  Y  S  V  F  L  P  P  P  K  L  E  F  S  Y  D  N  Q  E  W  I  Q  K  E  G  D  E  :  V  R  R  R  A  N  A  L  F  A  E  V  S  K  V  L  H  V  K  L  E  K  F  S  V  D  S  S  L  K  A  P  K  T  S  E  Q  I  T  E  M  E  E  I  L  E  K  E  K  T  E  F  E  :  G  L  L  R  K  A  L  S  R  E  I  K  V  G  Q  P  T  V  D  I  L  E  I  N  Q  L  R  R  Q  L  V  F  H  A  Y  L  W  D  R  R  L  I  H  L  S  S  S  H  G  K  N  S  R  T  P  G  S  L  T  Q  L  K  E  K  P  L  S  S  S  E  E  L  P  E  R  T  A  I  L  R  P  G  K  S  L  G  S  Y  D  S  A  L  Q  N  V  K  T  E  I  T  S  S  E  G  R  H  G  Q  I  P  D  G  V  H  E  R  L  T  T  D  E  N  L  T  H  G  K  D  C  E  I  F  C  A  I  R  N  T  G  D  G  N  V  L  E  P  G  K  N  V  R  R  V  L  S  D  A  K  F  P  S  V  G  S  L  S  D  T  L  D  A  A  W  T  G  E  S  H  L  A  I  K  E  H  N  S  A  F  P  G  S  F  V  V  D  S  T  A  L  T  G  V  S  A  N  T  D  V  E  R  S  L  C  D  K  N  G  A  E  I  P  H  L  S  A  K  S  D  N  T  D  Y  L  T  W  A  T  A  H  F  S  N  F  Y  R  S  F  N  K  N  I  T  A  N  P  Q  Y  V  A  K  L  N  E  H  N  P  V  Y  I  L  S  F  S  E  L  L  H  Q  G  G  A  R  L  L  T  A  V  G  E  N  D  I  V  I  P  V  Y  D  D  E  P  T  S  I  I  S  Y  A  L  V  S  P  D  Y  R  N  Q  M  S  D  E  S  Q  N  L  K  E  N  H  K  F  S  A  S  L  S  F  L  D  S  L  N  L  L  P  L  H  S  V  D  G  V  V  S  E  S  P  R  S  F  G  S  T  N  E  S  M  S  S  G  Y  S  S  R  S  S  N  M  D  P  P  A  Y  I  N  A  L  H  A  R  I  S  F  S  D  D  G  P  P  G  K  V  K  Y  T  V  T  C  Y  Y  A  K  Q  F  E  T  L  R  K  S  C  C  P  N  E  S  D  F  I  R  S  L  S  R  C  K  K  W  G  A  Q  G  G  K  S  N  V  F  F  A  K  T  L  D  D  R  F  I  I  K  Q  V  T  K  T  E  L  E  S  F  I  K  F  A  P  A  Y  F  K  Y  L  S  D  S  I  A  S  G  S  P  T  C  L  A  K  I  L  G  I  Y  Q  :  V  T  S  K  H  L  K  G  G  K  E  S  R  M  D  V  L  V  M  E  N  L  L  F  K  R  N  I  T  R  L  Y  D  L  K  G  S  S  R  S  R  Y  N  P  D  S  S  G  S  N  K  V  L  L  D  Q  N  L  I  E  A  M  P  T  S  P  I  F  V  G  T  Q  A  K  R  L  L  Q  R  A  V  W  N  D  T  S  F  L  A  :  S  I  D  V  M  D  Y  S  L  L  V  G  V  D  E  K  K  Q  E  L  V  L  G  I  I  D  F  M  R  Q  Y  T  W  D  K  H  L  E  T  W  V  K  A  S  G  I  L  G  G  P  K  N  A  A  P  T  V  I  S  P  K  Q  Y  K  I  R  F  R  K  A  M  S  T  Y  F  L  M  V  P  D  E  W  P  T  *  S  D  T  P  S  I  S  A  E  K  L  P  R  P  V  L  V  *  F  Y  P  S  F  L  M  P  S  S  F  V  Y  F  V  Q  E  C  W  V  V  A  L  S  L  E  D  Y  F  C  F  S  K  V  V  V  L  Q  S  Y  F  H  T  K  N  L  L  V  S  G  R  S  A  S  C  T  V  N  S  R  S  S  F  L  F  :  K  N  K  I  K  Y  E  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLe0008H22.2" strand="+"/>
                <serials PGL_serial="1" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16380" stop="16562"/>
                    <exon start="16662" stop="16993"/>
                    <exon start="19703" stop="19826"/>
                    <exon start="19912" stop="20070"/>
                    <exon start="21200" stop="22702"/>
                    <exon start="27695" stop="27961"/>
                    <exon start="28377" stop="28631"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>2820</number_coding_nucleotides>
                  <number_encoded_amino_acids>940</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GSLQQDYPSSPSDQLIIVVCLSTRCVWKGTVCEPPHISRIKFYGITDMPLGRFLRDRLFDENFRCPSCEMPPEAHVRCYTHRQGSLTISVKKLPECILPGEQEGKIWMWHRCLRCPRDNGFPPPTRRVVMSNAAWGLSFGKFLELSFSNHAAASRVASCGHLLHRDCLRFYGFGKMVACFRYAPVHVYSVFLPPPKLEFSYDNQEWIQKEGDEVRRRANALFAEVSKVLHVKLEKFSVDSSLKAPKTSEQITEMEEILEKEKTEFEGLLRKALSREIKVGQPTVDILEINQLRRQLVFHAYLWDRRLIHLSSSHGKNSRTPGSLTQLKEKPLSSSEELPERTAILRPGKSLGSYDSALQNVKTEITSSEGRHGQIPDGVHERLTTDENLTHGKDCEIFCAIRNTGDGNVLEPGKNVRRVLSDAKFPSVGSLSDTLDAAWTGESHLAIKEHNSAFPGSFVVDSTALTGVSANTDVERSLCDKNGAEIPHLSAKSDNTDYLTWATAHFSNFYRSFNKNITANPQYVAKLNEHNPVYILSFSELLHQGGARLLTAVGENDIVIPVYDDEPTSIISYALVSPDYRNQMSDESQNLKENHKFSASLSFLDSLNLLPLHSVDGVVSESPRSFGSTNESMSSGYSSRSSNMDPPAYINALHARISFSDDGPPGKVKYTVTCYYAKQFETLRKSCCPNESDFIRSLSRCKKWGAQGGKSNVFFAKTLDDRFIIKQVTKTELESFIKFAPAYFKYLSDSIASGSPTCLAKILGIYQVTSKHLKGGKESRMDVLVMENLLFKRNITRLYDLKGSSRSRYNPDSSGSNKVLLDQNLIEAMPTSPIFVGTQAKRLLQRAVWNDTSFLASIDVMDYSLLVGVDEKKQELVLGIIDFMRQYTWDKHLETWVKASGILGGPKNAAPTVISPKQYKIRFRKAMSTYFLMVPDEWPT*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07SLe0008H22.2" strand="+"/>
                <serials PGL_serial="1" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28637" stop="28861"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YPKYQCRKIAPAGLGIILSILSYAIKFCVFCAGMLGSCFIIRGLLLFFQSSSITELFPYKEFVSFWAFRQLYSQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="26885" e_stop="27161"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="26885" e_stop="27161" e_length="277"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26885" stop="27161"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249673" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTATTAGAGAAGTCCAACAATTTAATGAAGTGTTGCTTGTTCATTGTTCATCTGAGAACTAGCTAGCTGACATTTTCACCAAGTCATTGCCAAAGGAAAGGTTTGAAGATCCGAGGCAAAGAATTAGTGTTTGCCACAAAAATGCCAAGGAGGAGTGTTAGACAATTGACATTTTTTCAGCTTATTATTATTTTTACTATTTTTTACTTATTTCAATTTAGTGCTTCCTATTTTCTAGTAGACTTAGTCAACTTTAGTTGCTCAACTTTCTGAAG</gDNA_template>
            <first_frame> F  Y  *  R  S  P  T  I  *  *  S  V  A  C  S  L  F  I  *  E  L  A  S  *  H  F  H  Q  V  I  A  K  G  K  V  *  R  S  E  A  K  N  *  C  L  P  Q  K  C  Q  G  G  V  L  D  N  *  H  F  F  S  L  L  L  F  L  L  F  F  T  Y  F  N  L  V  L  P  I  F  *  *  T  *  S  T  L  V  A  Q  L  S  E  </first_frame>
            <second_frame>  F  I  R  E  V  Q  Q  F  N  E  V  L  L  V  H  C  S  S  E  N  *  L  A  D  I  F  T  K  S  L  P  K  E  R  F  E  D  P  R  Q  R  I  S  V  C  H  K  N  A  K  E  E  C  *  T  I  D  I  F  S  A  Y  Y  Y  F  Y  Y  F  L  L  I  S  I  *  C  F  L  F  S  S  R  L  S  Q  L  *  L  L  N  F  L  K </second_frame>
            <third_frame>   L  L  E  K  S  N  N  L  M  K  C  C  L  F  I  V  H  L  R  T  S  *  L  T  F  S  P  S  H  C  Q  R  K  G  L  K  I  R  G  K  E  L  V  F  A  T  K  M  P  R  R  S  V  R  Q  L  T  F  F  Q  L  I  I  I  F  T  I  F  Y  L  F  Q  F  S  A  S  Y  F  L  V  D  L  V  N  F  S  C  S  T  F  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLe0008H22.2" strand="+"/>
                <serials PGL_serial="1" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26953" stop="27159"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LTFSPSHCQRKGLKIRGKELVFATKMPRRSVRQLTFFQLIIIFTIFYLFQFSASYFLVDLVNFSCSTF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="29584" PGL_stop="28694"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="29584" e_stop="29574"/>
            <exon e_start="29139" e_stop="28694"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.190" acc_prob="0.000" e_score="0.727"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.727">
            <gDNA_exon_boundary e_start="29584" e_stop="29574" e_length="11"/>
          </exon>
          <intron i_serial="1" don_prob="0.190" acc_prob="0.000">
            <gDNA_intron_boundary i_start="29573" i_stop="29140" i_length="434"/>
          </intron>
          <exon e_serial="2" e_score="0.989">
            <gDNA_exon_boundary e_start="29139" e_stop="28694" e_length="446"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29584" stop="29574"/>
              <exon start="29139" stop="28694"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218230" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29584" stop="29574"/>
              <exon start="29139" stop="28695"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218013" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29584" stop="29574"/>
              <exon start="29139" stop="28737"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218089" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29584" stop="29574"/>
              <exon start="29139" stop="28895"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217874" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTTTTTTGAT : ATAATAATTGATCAACCTATACCGTGTGCAAAATAGGAAGGAGGCGAAGAATCGCGACAAGTACAACTCATTGCATAGGTGCCTGAAAATCAAAATGTCGCGAGTGCAGCTTATTTGAAACCATCCGATTGTAGGACTTACAAGATCAAATTACATTGATCTTTACTGCTACCACGGCAGCCCTTGTCAAAAGAGTCTCAATTCTCATGTAAACACATGAATATACCAAGAGCTTCCATTGAGCATCAGAATGTGGGATAAAAAGAAACGAAGACCGACTATTGACTGTACAACTGGCGGAACGCCCAGAAACTAACAAATTCTTTGTATGGAAATAACTCTGTAATACTACTACTTTGGAAAAACAAAAGTAATCCTCTAATGATAAAGCAACTACCCAACATTCCTGCACAAAATACACAAAACTTGATGGCATAAGAAAGGAT</gDNA_template>
            <first_frame> S  F  L  I :   *  *  L  I  N  L  Y  R  V  Q  N  R  K  E  A  K  N  R  D  K  Y  N  S  L  H  R  C  L  K  I  K  M  S  R  V  Q  L  I  *  N  H  P  I  V  G  L  T  R  S  N  Y  I  D  L  Y  C  Y  H  G  S  P  C  Q  K  S  L  N  S  H  V  N  T  *  I  Y  Q  E  L  P  L  S  I  R  M  W  D  K  K  K  R  R  P  T  I  D  C  T  T  G  G  T  P  R  N  *  Q  I  L  C  M  E  I  T  L  *  Y  Y  Y  F  G  K  T  K  V  I  L  *  *  *  S  N  Y  P  T  F  L  H  K  I  H  K  T  *  W  H  K  K  G  </first_frame>
            <second_frame>  L  F  *   : Y  N  N  *  S  T  Y  T  V  C  K  I  G  R  R  R  R  I  A  T  S  T  T  H  C  I  G  A  *  K  S  K  C  R  E  C  S  L  F  E  T  I  R  L  *  D  L  Q  D  Q  I  T  L  I  F  T  A  T  T  A  A  L  V  K  R  V  S  I  L  M  *  T  H  E  Y  T  K  S  F  H  *  A  S  E  C  G  I  K  R  N  E  D  R  L  L  T  V  Q  L  A  E  R  P  E  T  N  K  F  F  V  W  K  *  L  C  N  T  T  T  L  E  K  Q  K  *  S  S  N  D  K  A  T  T  Q  H  S  C  T  K  Y  T  K  L  D  G  I  R  K  D </second_frame>
            <third_frame>   F  F  D  :  I  I  I  D  Q  P  I  P  C  A  K  *  E  G  G  E  E  S  R  Q  V  Q  L  I  A  *  V  P  E  N  Q  N  V  A  S  A  A  Y  L  K  P  S  D  C  R  T  Y  K  I  K  L  H  *  S  L  L  L  P  R  Q  P  L  S  K  E  S  Q  F  S  C  K  H  M  N  I  P  R  A  S  I  E  H  Q  N  V  G  *  K  E  T  K  T  D  Y  *  L  Y  N  W  R  N  A  Q  K  L  T  N  S  L  Y  G  N  N  S  V  I  L  L  L  W  K  N  K  S  N  P  L  M  I  K  Q  L  P  N  I  P  A  Q  N  T  Q  N  L  M  A  *  E  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07SLe0008H22.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="38475" PGL_stop="38825"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="38475" e_stop="38825"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.943"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.943">
            <gDNA_exon_boundary e_start="38475" e_stop="38825" e_length="351"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38475" stop="38825"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347153" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AACGGTAAATCCAGACCTATAAGGAGGAAACACAGTAATGTAAGATCGTATTTGACAAATGGTACCATTAATGTTGATTATGTCAAATCTTGTGATAATCTTGCAGATCCTCTTACGAAGGCCTTAACAAGAGAAAAGTCCTGGAGCACATCGAGGGGGATGGGATTGAAGCCTACAAATCCTTGAGTCATATATGAGGAAACACAACCTGGGGAATAGATATCCTATAACCACGTTCAAAGGGAAAAACTAATCATATGATGACTTTTTGTGAAAAATGCACTATTTTTCCCCTCCCTATGATGTGAGTGCATTGTTTCCTGTAGTTTGTGAAGGTTGAGTTGATAAAAA</gDNA_template>
            <first_frame> N  G  K  S  R  P  I  R  R  K  H  S  N  V  R  S  Y  L  T  N  G  T  I  N  V  D  Y  V  K  S  C  D  N  L  A  D  P  L  T  K  A  L  T  R  E  K  S  W  S  T  S  R  G  M  G  L  K  P  T  N  P  *  V  I  Y  E  E  T  Q  P  G  E  *  I  S  Y  N  H  V  Q  R  E  K  L  I  I  *  *  L  F  V  K  N  A  L  F  F  P  S  L  *  C  E  C  I  V  S  C  S  L  *  R  L  S  *  *  K </first_frame>
            <second_frame>  T  V  N  P  D  L  *  G  G  N  T  V  M  *  D  R  I  *  Q  M  V  P  L  M  L  I  M  S  N  L  V  I  I  L  Q  I  L  L  R  R  P  *  Q  E  K  S  P  G  A  H  R  G  G  W  D  *  S  L  Q  I  L  E  S  Y  M  R  K  H  N  L  G  N  R  Y  P  I  T  T  F  K  G  K  N  *  S  Y  D  D  F  L  *  K  M  H  Y  F  S  P  P  Y  D  V  S  A  L  F  P  V  V  C  E  G  *  V  D  K   </second_frame>
            <third_frame>   R  *  I  Q  T  Y  K  E  E  T  Q  *  C  K  I  V  F  D  K  W  Y  H  *  C  *  L  C  Q  I  L  *  *  S  C  R  S  S  Y  E  G  L  N  K  R  K  V  L  E  H  I  E  G  D  G  I  E  A  Y  K  S  L  S  H  I  *  G  N  T  T  W  G  I  D  I  L  *  P  R  S  K  G  K  T  N  H  M  M  T  F  C  E  K  C  T  I  F  P  L  P  M  M  *  V  H  C  F  L  *  F  V  K  V  E  L  I  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07SLe0008H22.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="46262" PGL_stop="46917"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="46262" e_stop="46917"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.916"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.916">
            <gDNA_exon_boundary e_start="46262" e_stop="46917" e_length="656"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46262" stop="46917"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E728374" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGATGATTAACCAGGTTCTTACTTATGTTAGCGGGTTATCTGATTAGGGACAGACACCTCCAGTGTTTTCTGCATCAGCACCTCAGGTTCCGGTAATACAACATGCAGCTGCTGTGGCTCCCCGCATGGATGCCTTATTGGAAGTAGGCATGTTTCCTCGATTGACTACAAGGTCTATAATGACGAGTAATCAACATGAACTTTTCACTAAATTCTTAAAGTTGAAACCTCCAGTCTTCAAGGGTGCTGAATCTGAGGATGCCTATGATTTTCTGGCTGATTGTCATGAGCTGCTACATAAGATGGACATAGTAGAATGATTCGGTGTTGAGTTTGTGACCTACCAGTTTTAGGGGAATGCCAAAATGTGGTGGCAGTCGTATGTTGAGTGTCAACCAGCACAGGCACCACCTATGACTTGGGCATCATTCTCTAGCTTATTTATGAAGAAATATATACCCTAGACTTTGAGGGACAAGAAGAGAGATGAGTTCCTGAGCCTACTGTAAGGCAGGATGTTTGTTACTACTTATGAGGCTAAATTTCGGGCACTATCCAGGTATGCCACCCAGCTTTGCTTCAGTCCACAAGAGCGGATTCGCCTTTTTGTGAAAGGATTGAGGTCAGATTTGCAGATCCCAGCCTTACAGGTAGCT</gDNA_template>
            <first_frame> R  *  L  T  R  F  L  L  M  L  A  G  Y  L  I  R  D  R  H  L  Q  C  F  L  H  Q  H  L  R  F  R  *  Y  N  M  Q  L  L  W  L  P  A  W  M  P  Y  W  K  *  A  C  F  L  D  *  L  Q  G  L  *  *  R  V  I  N  M  N  F  S  L  N  S  *  S  *  N  L  Q  S  S  R  V  L  N  L  R  M  P  M  I  F  W  L  I  V  M  S  C  Y  I  R  W  T  *  *  N  D  S  V  L  S  L  *  P  T  S  F  R  G  M  P  K  C  G  G  S  R  M  L  S  V  N  Q  H  R  H  H  L  *  L  G  H  H  S  L  A  Y  L  *  R  N  I  Y  P  R  L  *  G  T  R  R  E  M  S  S  *  A  Y  C  K  A  G  C  L  L  L  L  M  R  L  N  F  G  H  Y  P  G  M  P  P  S  F  A  S  V  H  K  S  G  F  A  F  L  *  K  D  *  G  Q  I  C  R  S  Q  P  Y  R  *   </first_frame>
            <second_frame>  D  D  *  P  G  S  Y  L  C  *  R  V  I  *  L  G  T  D  T  S  S  V  F  C  I  S  T  S  G  S  G  N  T  T  C  S  C  C  G  S  P  H  G  C  L  I  G  S  R  H  V  S  S  I  D  Y  K  V  Y  N  D  E  *  S  T  *  T  F  H  *  I  L  K  V  E  T  S  S  L  Q  G  C  *  I  *  G  C  L  *  F  S  G  *  L  S  *  A  A  T  *  D  G  H  S  R  M  I  R  C  *  V  C  D  L  P  V  L  G  E  C  Q  N  V  V  A  V  V  C  *  V  S  T  S  T  G  T  T  Y  D  L  G  I  I  L  *  L  I  Y  E  E  I  Y  T  L  D  F  E  G  Q  E  E  R  *  V  P  E  P  T  V  R  Q  D  V  C  Y  Y  L  *  G  *  I  S  G  T  I  Q  V  C  H  P  A  L  L  Q  S  T  R  A  D  S  P  F  C  E  R  I  E  V  R  F  A  D  P  S  L  T  G  S  </second_frame>
            <third_frame>   M  I  N  Q  V  L  T  Y  V  S  G  L  S  D  *  G  Q  T  P  P  V  F  S  A  S  A  P  Q  V  P  V  I  Q  H  A  A  A  V  A  P  R  M  D  A  L  L  E  V  G  M  F  P  R  L  T  T  R  S  I  M  T  S  N  Q  H  E  L  F  T  K  F  L  K  L  K  P  P  V  F  K  G  A  E  S  E  D  A  Y  D  F  L  A  D  C  H  E  L  L  H  K  M  D  I  V  E  *  F  G  V  E  F  V  T  Y  Q  F  *  G  N  A  K  M  W  W  Q  S  Y  V  E  C  Q  P  A  Q  A  P  P  M  T  W  A  S  F  S  S  L  F  M  K  K  Y  I  P  *  T  L  R  D  K  K  R  D  E  F  L  S  L  L  *  G  R  M  F  V  T  T  Y  E  A  K  F  R  A  L  S  R  Y  A  T  Q  L  C  F  S  P  Q  E  R  I  R  L  F  V  K  G  L  R  S  D  L  Q  I  P  A  L  Q  V  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLe0008H22.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="46309" stop="46581"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>270</number_coding_nucleotides>
                  <number_encoded_amino_acids>90</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GQTPPVFSASAPQVPVIQHAAAVAPRMDALLEVGMFPRLTTRSIMTSNQHELFTKFLKLKPPVFKGAESEDAYDFLADCHELLHKMDIVE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="60552" PGL_stop="60159"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="60552" e_stop="60159"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="60552" e_stop="60159" e_length="394"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60552" stop="60159"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E394130" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGGAGGTTCTGGGAACTTTGTGGCATGGAGGAAGGTTTTAACCCAGTTCAATTCATATACATCGATCCTACGGTGATTATAGATTATACATGTAAAGCTTTATTGAAGGAACAACTTAAAGTTTTGGCTTCTGGATTTATCGTCATCTGAAGAATCATCAATGCATCACTCTTGTTTCTGTGGTAACATTCAGTTTACGATGGTAGTTAGTAAGTAAATTGAAAGGCTTTGCGCCATTGGTGTCAGATTTTGGGTTTTCAAATTTCTTGTTGTACCCTAGATTTTACCGCTGCTTGATTAGTTTTACTACTCCCATCCTGTTCCATTTTACTTTGATTGTCATAGTTGACTTGACACAACTTAATTCAAAAATGAAAGCATTGATCTTAAACAT</gDNA_template>
            <first_frame> W  R  F  W  E  L  C  G  M  E  E  G  F  N  P  V  Q  F  I  Y  I  D  P  T  V  I  I  D  Y  T  C  K  A  L  L  K  E  Q  L  K  V  L  A  S  G  F  I  V  I  *  R  I  I  N  A  S  L  L  F  L  W  *  H  S  V  Y  D  G  S  *  *  V  N  *  K  A  L  R  H  W  C  Q  I  L  G  F  Q  I  S  C  C  T  L  D  F  T  A  A  *  L  V  L  L  L  P  S  C  S  I  L  L  *  L  S  *  L  T  *  H  N  L  I  Q  K  *  K  H  *  S  *  T  </first_frame>
            <second_frame>  G  G  S  G  N  F  V  A  W  R  K  V  L  T  Q  F  N  S  Y  T  S  I  L  R  *  L  *  I  I  H  V  K  L  Y  *  R  N  N  L  K  F  W  L  L  D  L  S  S  S  E  E  S  S  M  H  H  S  C  F  C  G  N  I  Q  F  T  M  V  V  S  K  *  I  E  R  L  C  A  I  G  V  R  F  W  V  F  K  F  L  V  V  P  *  I  L  P  L  L  D  *  F  Y  Y  S  H  P  V  P  F  Y  F  D  C  H  S  *  L  D  T  T  *  F  K  N  E  S  I  D  L  K  H </second_frame>
            <third_frame>   E  V  L  G  T  L  W  H  G  G  R  F  *  P  S  S  I  H  I  H  R  S  Y  G  D  Y  R  L  Y  M  *  S  F  I  E  G  T  T  *  S  F  G  F  W  I  Y  R  H  L  K  N  H  Q  C  I  T  L  V  S  V  V  T  F  S  L  R  W  *  L  V  S  K  L  K  G  F  A  P  L  V  S  D  F  G  F  S  N  F  L  L  Y  P  R  F  Y  R  C  L  I  S  F  T  T  P  I  L  F  H  F  T  L  I  V  I  V  D  L  T  Q  L  N  S  K  M  K  A  L  I  L  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07SLe0008H22.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="77644" PGL_stop="60753"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="77591" e_stop="77233"/>
            <exon e_start="72102" e_stop="72019"/>
            <exon e_start="71934" e_stop="71833"/>
            <exon e_start="70226" e_stop="70182"/>
            <exon e_start="70064" e_stop="69990"/>
            <exon e_start="69871" e_stop="69776"/>
            <exon e_start="69247" e_stop="69170"/>
            <exon e_start="68306" e_stop="68215"/>
            <exon e_start="67967" e_stop="67906"/>
            <exon e_start="67740" e_stop="67696"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.986" e_score="0.997"/>
          <exon-intron don_prob="0.992" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.997" e_score="0.990"/>
          <exon-intron don_prob="0.959" acc_prob="0.847" e_score="0.933"/>
          <exon-intron don_prob="0.914" acc_prob="0.917" e_score="0.960"/>
          <exon-intron don_prob="0.832" acc_prob="0.926" e_score="0.927"/>
          <exon-intron don_prob="0.920" acc_prob="0.998" e_score="0.987"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.946"/>
          <exon-intron don_prob="0.995" acc_prob="0.630" e_score="0.952"/>
          <exon-only e_score="0.933"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="77591" e_stop="77233" e_length="359"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.986">
            <gDNA_intron_boundary i_start="77232" i_stop="72103" i_length="5130"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="72102" e_stop="72019" e_length="84"/>
          </exon>
          <intron i_serial="2" don_prob="0.992" acc_prob="0.997">
            <gDNA_intron_boundary i_start="72018" i_stop="71935" i_length="84"/>
          </intron>
          <exon e_serial="3" e_score="0.990">
            <gDNA_exon_boundary e_start="71934" e_stop="71833" e_length="102"/>
          </exon>
          <intron i_serial="3" don_prob="0.980" acc_prob="0.997">
            <gDNA_intron_boundary i_start="71832" i_stop="70227" i_length="1606"/>
          </intron>
          <exon e_serial="4" e_score="0.933">
            <gDNA_exon_boundary e_start="70226" e_stop="70182" e_length="45"/>
          </exon>
          <intron i_serial="4" don_prob="0.959" acc_prob="0.847">
            <gDNA_intron_boundary i_start="70181" i_stop="70065" i_length="117"/>
          </intron>
          <exon e_serial="5" e_score="0.960">
            <gDNA_exon_boundary e_start="70064" e_stop="69990" e_length="75"/>
          </exon>
          <intron i_serial="5" don_prob="0.914" acc_prob="0.917">
            <gDNA_intron_boundary i_start="69989" i_stop="69872" i_length="118"/>
          </intron>
          <exon e_serial="6" e_score="0.927">
            <gDNA_exon_boundary e_start="69871" e_stop="69776" e_length="96"/>
          </exon>
          <intron i_serial="6" don_prob="0.832" acc_prob="0.926">
            <gDNA_intron_boundary i_start="69775" i_stop="69248" i_length="528"/>
          </intron>
          <exon e_serial="7" e_score="0.987">
            <gDNA_exon_boundary e_start="69247" e_stop="69170" e_length="78"/>
          </exon>
          <intron i_serial="7" don_prob="0.920" acc_prob="0.998">
            <gDNA_intron_boundary i_start="69169" i_stop="68307" i_length="863"/>
          </intron>
          <exon e_serial="8" e_score="0.946">
            <gDNA_exon_boundary e_start="68306" e_stop="68215" e_length="92"/>
          </exon>
          <intron i_serial="8" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="68214" i_stop="67968" i_length="247"/>
          </intron>
          <exon e_serial="9" e_score="0.952">
            <gDNA_exon_boundary e_start="67967" e_stop="67906" e_length="62"/>
          </exon>
          <intron i_serial="9" don_prob="0.995" acc_prob="0.630">
            <gDNA_intron_boundary i_start="67905" i_stop="67741" i_length="165"/>
          </intron>
          <exon e_serial="10" e_score="0.933">
            <gDNA_exon_boundary e_start="67740" e_stop="67696" e_length="45"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77591" stop="77233"/>
              <exon start="72102" stop="72019"/>
              <exon start="71934" stop="71874"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E394131" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77590" stop="77233"/>
              <exon start="72102" stop="72019"/>
              <exon start="71934" stop="71833"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E330382" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77444" stop="77233"/>
              <exon start="72102" stop="72019"/>
              <exon start="71934" stop="71885"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E330878" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77321" stop="77233"/>
              <exon start="72102" stop="72019"/>
              <exon start="71934" stop="71833"/>
              <exon start="70226" stop="70182"/>
              <exon start="70064" stop="69990"/>
              <exon start="69871" stop="69776"/>
              <exon start="69247" stop="69170"/>
              <exon start="68306" stop="68215"/>
              <exon start="67967" stop="67906"/>
              <exon start="67740" stop="67696"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E454663" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77321" stop="77233"/>
              <exon start="72102" stop="72019"/>
              <exon start="71934" stop="71833"/>
              <exon start="70226" stop="70182"/>
              <exon start="70064" stop="69990"/>
              <exon start="69871" stop="69776"/>
              <exon start="69247" stop="69170"/>
              <exon start="68306" stop="68215"/>
              <exon start="67967" stop="67906"/>
              <exon start="67740" stop="67711"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E454964" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCCAAAGCTAAGCCAGAGGATCATCCCAGATCTCCAACTTCATCGTTCAAATCACCCTTTTTTTCAACTTCGAAGTCGAAATTGCTTCCATTGAAGCTCCAAAATCCATATGGTGATGGCTACAATCATCTGTAGTATTGATTGTTTTGGTATCAGTAATTGACTAGTTACTACACAGTCCGTTTCCCCCTCATTTTTCATCAATTCTGTTTCGTTTTACTTTTTACACGAACAGAAACAGTTGCAAAGTAGTGGAAGAAGAGAGTGATGATAATACTATGGCGGCAACGACAAGGCCGGGGGTTCTCAAGTCCGAAGCTGTTTCCAAAGGCTATAATTTCGCTTCTACTTGGGAACAG : AATGCTCTGTTAACAGAGCAACAATCAGCAGCCATACAAGCACTTTCCCATGCAGTTGCCGAGAGACCTTTCCCGTCCAATTTG : GACCAAGTTTCTGGACATGATAACAGCCTCTCTGTTTCAACAAAGCTTAGTTCTCTAGAGGATTCAGGGGCCATTGAAGCAGTCCTAGTGAATACAAATCAG : TTTTATAAGTGGTTCGCGGATCTTGAAGCAGCCATGAAATTAGAG : TCTGAAGAAAAATATCAGCATTATGCCAGCACCTTAACAGAGCAGATTCAGACCTGCGATAGTATACTTCACCAG : GTGGATGAAACACTTGACTTGTTCAATGAGTTGCAATTGCAGCATCAAGCAGTGGCAACAAAGACAAGAACTCTTCATGATGCGTGCGATAGACTG : CTTTTGGAGAAGCAGAAAATAATTGAGTTTGCAGAATCACTTCACAATAAGCTCAATTACTTTGATGAATTGGAGAAT : GTTGCTACCACTTTTTATTCTCCTAGCATGAGCGTTGGTAGTACAAATTTTCTTCCATTGCTAAAGAGACTTGATGAGTGCATATCCTAAGT : AGAGTAGTAACCCACAATATGCAGAGTGCAGCATTTATTTGGTCAAGTTTCGACAACTTCAG : TCTCGAGCTCTGGGAATGATTCGCACTCACGTTCTTTCCGTTCTT</gDNA_template>
            <first_frame> P  K  A  K  P  E  D  H  P  R  S  P  T  S  S  F  K  S  P  F  F  S  T  S  K  S  K  L  L  P  L  K  L  Q  N  P  Y  G  D  G  Y  N  H  L  *  Y  *  L  F  W  Y  Q  *  L  T  S  Y  Y  T  V  R  F  P  L  I  F  H  Q  F  C  F  V  L  L  F  T  R  T  E  T  V  A  K  *  W  K  K  R  V  M  I  I  L  W  R  Q  R  Q  G  R  G  F  S  S  P  K  L  F  P  K  A  I  I  S  L  L  L  G  N  R :   M  L  C  *  Q  S  N  N  Q  Q  P  Y  K  H  F  P  M  Q  L  P  R  D  L  S  R  P  I  W :   T  K  F  L  D  M  I  T  A  S  L  F  Q  Q  S  L  V  L  *  R  I  Q  G  P  L  K  Q  S  *  *  I  Q  I  S :   F  I  S  G  S  R  I  L  K  Q  P  *  N  *  S :   L  K  K  N  I  S  I  M  P  A  P  *  Q  S  R  F  R  P  A  I  V  Y  F  T  R :   W  M  K  H  L  T  C  S  M  S  C  N  C  S  I  K  Q  W  Q  Q  R  Q  E  L  F  M  M  R  A  I  D  C :   F  W  R  S  R  K  *  L  S  L  Q  N  H  F  T  I  S  S  I  T  L  M  N  W  R  M :   L  L  P  L  F  I  L  L  A  *  A  L  V  V  Q  I  F  F  H  C  *  R  D  L  M  S  A  Y  P  K   : *  S  S  N  P  Q  Y  A  E  C  S  I  Y  L  V  K  F  R  Q  L  Q  :  S  R  A  L  G  M  I  R  T  H  V  L  S  V  L </first_frame>
            <second_frame>  P  K  L  S  Q  R  I  I  P  D  L  Q  L  H  R  S  N  H  P  F  F  Q  L  R  S  R  N  C  F  H  *  S  S  K  I  H  M  V  M  A  T  I  I  C  S  I  D  C  F  G  I  S  N  *  L  V  T  T  Q  S  V  S  P  S  F  F  I  N  S  V  S  F  Y  F  L  H  E  Q  K  Q  L  Q  S  S  G  R  R  E  *  *  *  Y  Y  G  G  N  D  K  A  G  G  S  Q  V  R  S  C  F  Q  R  L  *  F  R  F  Y  L  G  T   : E  C  S  V  N  R  A  T  I  S  S  H  T  S  T  F  P  C  S  C  R  E  T  F  P  V  Q  F   : G  P  S  F  W  T  *  *  Q  P  L  C  F  N  K  A  *  F  S  R  G  F  R  G  H  *  S  S  P  S  E  Y  K  S   : V  L  *  V  V  R  G  S  *  S  S  H  E  I  R   : V  *  R  K  I  S  A  L  C  Q  H  L  N  R  A  D  S  D  L  R  *  Y  T  S  P   : G  G  *  N  T  *  L  V  Q  *  V  A  I  A  A  S  S  S  G  N  K  D  K  N  S  S  *  C  V  R  *  T   : A  F  G  E  A  E  N  N  *  V  C  R  I  T  S  Q  *  A  Q  L  L  *  *  I  G  E   : C  C  Y  H  F  L  F  S  *  H  E  R  W  *  Y  K  F  S  S  I  A  K  E  T  *  *  V  H  I  L  S  :  R  V  V  T  H  N  M  Q  S  A  A  F  I  W  S  S  F  D  N  F  S :   L  E  L  W  E  *  F  A  L  T  F  F  P  F   </second_frame>
            <third_frame>   Q  S  *  A  R  G  S  S  Q  I  S  N  F  I  V  Q  I  T  L  F  F  N  F  E  V  E  I  A  S  I  E  A  P  K  S  I  W  *  W  L  Q  S  S  V  V  L  I  V  L  V  S  V  I  D  *  L  L  H  S  P  F  P  P  H  F  S  S  I  L  F  R  F  T  F  Y  T  N  R  N  S  C  K  V  V  E  E  E  S  D  D  N  T  M  A  A  T  T  R  P  G  V  L  K  S  E  A  V  S  K  G  Y  N  F  A  S  T  W  E  Q  :  N  A  L  L  T  E  Q  Q  S  A  A  I  Q  A  L  S  H  A  V  A  E  R  P  F  P  S  N  L  :  D  Q  V  S  G  H  D  N  S  L  S  V  S  T  K  L  S  S  L  E  D  S  G  A  I  E  A  V  L  V  N  T  N  Q  :  F  Y  K  W  F  A  D  L  E  A  A  M  K  L  E  :  S  E  E  K  Y  Q  H  Y  A  S  T  L  T  E  Q  I  Q  T  C  D  S  I  L  H  Q  :  V  D  E  T  L  D  L  F  N  E  L  Q  L  Q  H  Q  A  V  A  T  K  T  R  T  L  H  D  A  C  D  R  L  :  L  L  E  K  Q  K  I  I  E  F  A  E  S  L  H  N  K  L  N  Y  F  D  E  L  E  N  :  V  A  T  T  F  Y  S  P  S  M  S  V  G  S  T  N  F  L  P  L  L  K  R  L  D  E  C  I  S  *  V :   E  *  *  P  T  I  C  R  V  Q  H  L  F  G  Q  V  S  T  T  S   : V  S  S  S  G  N  D  S  H  S  R  S  F  R  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLe0008H22.2" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="77424" stop="77233"/>
                    <exon start="72102" stop="72019"/>
                    <exon start="71934" stop="71833"/>
                    <exon start="70226" stop="70182"/>
                    <exon start="70064" stop="69990"/>
                    <exon start="69871" stop="69776"/>
                    <exon start="69247" stop="69170"/>
                    <exon start="68306" stop="68217"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>759</number_coding_nucleotides>
                  <number_encoded_amino_acids>253</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLHSPFPPHFSSILFRFTFYTNRNSCKVVEEESDDNTMAATTRPGVLKSEAVSKGYNFASTWEQNALLTEQQSAAIQALSHAVAERPFPSNLDQVSGHDNSLSVSTKLSSLEDSGAIEAVLVNTNQFYKWFADLEAAMKLESEEKYQHYASTLTEQIQTCDSILHQVDETLDLFNELQLQHQAVATKTRTLHDACDRLLLEKQKIIEFAESLHNKLNYFDELENVATTFYSPSMSVGSTNFLPLLKRLDECIS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="68167" e_stop="67906"/>
            <exon e_start="67740" e_stop="67678"/>
            <exon e_start="67596" e_stop="67495"/>
            <exon e_start="67326" e_stop="67222"/>
            <exon e_start="67111" e_stop="67019"/>
            <exon e_start="66481" e_stop="66393"/>
            <exon e_start="62576" e_stop="62357"/>
            <exon e_start="61166" e_stop="61079"/>
            <exon e_start="60944" e_stop="60753"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.630" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.924" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.906" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.836" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.887" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="68167" e_stop="67906" e_length="262"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.630">
            <gDNA_intron_boundary i_start="67905" i_stop="67741" i_length="165"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="67740" e_stop="67678" e_length="63"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.924">
            <gDNA_intron_boundary i_start="67677" i_stop="67597" i_length="81"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="67596" e_stop="67495" e_length="102"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.000">
            <gDNA_intron_boundary i_start="67494" i_stop="67327" i_length="168"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="67326" e_stop="67222" e_length="105"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.990">
            <gDNA_intron_boundary i_start="67221" i_stop="67112" i_length="110"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="67111" e_stop="67019" e_length="93"/>
          </exon>
          <intron i_serial="5" don_prob="0.931" acc_prob="0.906">
            <gDNA_intron_boundary i_start="67018" i_stop="66482" i_length="537"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="66481" e_stop="66393" e_length="89"/>
          </exon>
          <intron i_serial="6" don_prob="0.980" acc_prob="0.836">
            <gDNA_intron_boundary i_start="66392" i_stop="62577" i_length="3816"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="62576" e_stop="62357" e_length="220"/>
          </exon>
          <intron i_serial="7" don_prob="0.997" acc_prob="0.995">
            <gDNA_intron_boundary i_start="62356" i_stop="61167" i_length="1190"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="61166" e_stop="61079" e_length="88"/>
          </exon>
          <intron i_serial="8" don_prob="0.995" acc_prob="0.887">
            <gDNA_intron_boundary i_start="61078" i_stop="60945" i_length="134"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="60944" e_stop="60753" e_length="192"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68167" stop="67906"/>
              <exon start="67740" stop="67678"/>
              <exon start="67596" stop="67495"/>
              <exon start="67326" stop="67222"/>
              <exon start="67111" stop="67019"/>
              <exon start="66481" stop="66393"/>
              <exon start="62576" stop="62537"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E687822" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68164" stop="67906"/>
              <exon start="67740" stop="67678"/>
              <exon start="67596" stop="67495"/>
              <exon start="67326" stop="67222"/>
              <exon start="67111" stop="67019"/>
              <exon start="66481" stop="66433"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327185" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67594" stop="67495"/>
              <exon start="67326" stop="67222"/>
              <exon start="67111" stop="67019"/>
              <exon start="66481" stop="66393"/>
              <exon start="62576" stop="62422"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266187" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62576" stop="62357"/>
              <exon start="61166" stop="61079"/>
              <exon start="60944" stop="60753"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235821" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CACTGCAATGTTGTACCATCCATGCTTTTCTTTGGTTATTTGTGAAGTTTACTATGTGGACATGTCTAGAGTCACAGGTTTCTTCTAGGGATATGACTTCTTTTATCAAGATTAAGTTCTATTGAGTTAAGCTTGTAAATCTATGCATAAGAGCACAAATAACCTTTGTGTTTCTCCTCTGCATCACTGAAGATATGTAGAGAGTAGTAACCCACAATATGCAGAGTGCAGCATTTATTTGGTCAAGTTTCGACAACTTCAG : TCTCGAGCTCTGGGAATGATTCGCACTCACGTTCTTTCCGTTCTTAGAAGCACTTCTTCTCAG : GTTCAGGCTGCAATAAGAAGCAGCGGTGGTAACAAGACATCTTTTGCCGAGGGTATAGAGCCATCTATAATATATGTACGATTCAAGGCTGCAGCAAATGAG : CTTAAGCCTATCCTGGAGGAAATTGAAAGCAGAACACCTAGAAAAGAGTATATTCAACTTCTTGAAGAATGCCACAAACTCTATTGCGAACAGCGCCTTTCCTTG : ATAAGAGGTATAGTGCAACAGCGGATCTCTGAATTTTCTAGGAAAGAAGCATTGTCGTCTTTAACTAGATCTGGATGTGCATATTTAATGCAG : GTGTGTCAGCTGGAGCATCAACTCTTCAATCACTTCTTTCCATCATCTTCAGAGGACATTTCGAGTTTGACTCCTCTTGTAGATCCTCT : GTGTACTTTCCTCTATGATACATCGCGTCCTAAACTTATTCACGAAACAAACCTGGATGTTCTTTGTGAACTGGTTAATATCCTCAAAGTTGAAGTTCTAGGAGAACAGCTGAGCAGACGGAGGAAGTCATTGGCTGGGTTACCTCCAACGCTAGACAGGATTCTAGCTAATGTTCATGAACGATTAACTTTTCGTGCTCGCACCTATATCCGTGATGAG : ATTGCAAATTATCTTCCTTCAGACGAGGATCTGGGATTACCCTAAGAAGTTGGAGCAATCTGTTTCAGCAGAACTGGATTCACCATCT : AAGTTTGCATTCTCTTGTGAAGGTTGCAGTTTGATATATGGAGGTTCTGTAAATCAATATCTTGCTCAAGGGTGTGAACTGACTATTCTTGACCTGTGATTCTAGTTGGATGCATATATTCCATTTTTATATTTGTGCAGGACTAATATATTAGAAGCACACGTTTAGGTGCTATCCCTTCTGAAAAAAGAA</gDNA_template>
            <first_frame> H  C  N  V  V  P  S  M  L  F  F  G  Y  L  *  S  L  L  C  G  H  V  *  S  H  R  F  L  L  G  I  *  L  L  L  S  R  L  S  S  I  E  L  S  L  *  I  Y  A  *  E  H  K  *  P  L  C  F  S  S  A  S  L  K  I  C  R  E  *  *  P  T  I  C  R  V  Q  H  L  F  G  Q  V  S  T  T  S   : V  S  S  S  G  N  D  S  H  S  R  S  F  R  S  *  K  H  F  F  S   : G  S  G  C  N  K  K  Q  R  W  *  Q  D  I  F  C  R  G  Y  R  A  I  Y  N  I  C  T  I  Q  G  C  S  K  *   : A  *  A  Y  P  G  G  N  *  K  Q  N  T  *  K  R  V  Y  S  T  S  *  R  M  P  Q  T  L  L  R  T  A  P  F  L   : D  K  R  Y  S  A  T  A  D  L  *  I  F  *  E  R  S  I  V  V  F  N  *  I  W  M  C  I  F  N  A   : G  V  S  A  G  A  S  T  L  Q  S  L  L  S  I  I  F  R  G  H  F  E  F  D  S  S  C  R  S  S  :  V  Y  F  P  L  *  Y  I  A  S  *  T  Y  S  R  N  K  P  G  C  S  L  *  T  G  *  Y  P  Q  S  *  S  S  R  R  T  A  E  Q  T  E  E  V  I  G  W  V  T  S  N  A  R  Q  D  S  S  *  C  S  *  T  I  N  F  S  C  S  H  L  Y  P  *  *   : D  C  K  L  S  S  F  R  R  G  S  G  I  T  L  R  S  W  S  N  L  F  Q  Q  N  W  I  H  H  L :   S  L  H  S  L  V  K  V  A  V  *  Y  M  E  V  L  *  I  N  I  L  L  K  G  V  N  *  L  F  L  T  C  D  S  S  W  M  H  I  F  H  F  Y  I  C  A  G  L  I  Y  *  K  H  T  F  R  C  Y  P  F  *  K  K   </first_frame>
            <second_frame>  T  A  M  L  Y  H  P  C  F  S  L  V  I  C  E  V  Y  Y  V  D  M  S  R  V  T  G  F  F  *  G  Y  D  F  F  Y  Q  D  *  V  L  L  S  *  A  C  K  S  M  H  K  S  T  N  N  L  C  V  S  P  L  H  H  *  R  Y  V  E  S  S  N  P  Q  Y  A  E  C  S  I  Y  L  V  K  F  R  Q  L  Q  :  S  R  A  L  G  M  I  R  T  H  V  L  S  V  L  R  S  T  S  S  Q  :  V  Q  A  A  I  R  S  S  G  G  N  K  T  S  F  A  E  G  I  E  P  S  I  I  Y  V  R  F  K  A  A  A  N  E  :  L  K  P  I  L  E  E  I  E  S  R  T  P  R  K  E  Y  I  Q  L  L  E  E  C  H  K  L  Y  C  E  Q  R  L  S  L  :  I  R  G  I  V  Q  Q  R  I  S  E  F  S  R  K  E  A  L  S  S  L  T  R  S  G  C  A  Y  L  M  Q  :  V  C  Q  L  E  H  Q  L  F  N  H  F  F  P  S  S  S  E  D  I  S  S  L  T  P  L  V  D  P  L :   C  T  F  L  Y  D  T  S  R  P  K  L  I  H  E  T  N  L  D  V  L  C  E  L  V  N  I  L  K  V  E  V  L  G  E  Q  L  S  R  R  R  K  S  L  A  G  L  P  P  T  L  D  R  I  L  A  N  V  H  E  R  L  T  F  R  A  R  T  Y  I  R  D  E  :  I  A  N  Y  L  P  S  D  E  D  L  G  L  P  *  E  V  G  A  I  C  F  S  R  T  G  F  T  I   : *  V  C  I  L  L  *  R  L  Q  F  D  I  W  R  F  C  K  S  I  S  C  S  R  V  *  T  D  Y  S  *  P  V  I  L  V  G  C  I  Y  S  I  F  I  F  V  Q  D  *  Y  I  R  S  T  R  L  G  A  I  P  S  E  K  R  </second_frame>
            <third_frame>   L  Q  C  C  T  I  H  A  F  L  W  L  F  V  K  F  T  M  W  T  C  L  E  S  Q  V  S  S  R  D  M  T  S  F  I  K  I  K  F  Y  *  V  K  L  V  N  L  C  I  R  A  Q  I  T  F  V  F  L  L  C  I  T  E  D  M  *  R  V  V  T  H  N  M  Q  S  A  A  F  I  W  S  S  F  D  N  F  S :   L  E  L  W  E  *  F  A  L  T  F  F  P  F  L  E  A  L  L  L  R :   F  R  L  Q  *  E  A  A  V  V  T  R  H  L  L  P  R  V  *  S  H  L  *  Y  M  Y  D  S  R  L  Q  Q  M  S :   L  S  L  S  W  R  K  L  K  A  E  H  L  E  K  S  I  F  N  F  L  K  N  A  T  N  S  I  A  N  S  A  F  P  * :   *  E  V  *  C  N  S  G  S  L  N  F  L  G  K  K  H  C  R  L  *  L  D  L  D  V  H  I  *  C  R :   C  V  S  W  S  I  N  S  S  I  T  S  F  H  H  L  Q  R  T  F  R  V  *  L  L  L  *  I  L   : C  V  L  S  S  M  I  H  R  V  L  N  L  F  T  K  Q  T  W  M  F  F  V  N  W  L  I  S  S  K  L  K  F  *  E  N  S  *  A  D  G  G  S  H  W  L  G  Y  L  Q  R  *  T  G  F  *  L  M  F  M  N  D  *  L  F  V  L  A  P  I  S  V  M  R :   L  Q  I  I  F  L  Q  T  R  I  W  D  Y  P  K  K  L  E  Q  S  V  S  A  E  L  D  S  P  S  :  K  F  A  F  S  C  E  G  C  S  L  I  Y  G  G  S  V  N  Q  Y  L  A  Q  G  C  E  L  T  I  L  D  L  *  F  *  L  D  A  Y  I  P  F  L  Y  L  C  R  T  N  I  L  E  A  H  V  *  V  L  S  L  L  K  K  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLe0008H22.2" strand="-"/>
                <serials PGL_serial="6" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67977" stop="67906"/>
                    <exon start="67740" stop="67678"/>
                    <exon start="67596" stop="67495"/>
                    <exon start="67326" stop="67222"/>
                    <exon start="67111" stop="67019"/>
                    <exon start="66481" stop="66393"/>
                    <exon start="62576" stop="62357"/>
                    <exon start="61166" stop="61122"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>786</number_coding_nucleotides>
                  <number_encoded_amino_acids>262</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RYVESSNPQYAECSIYLVKFRQLQSRALGMIRTHVLSVLRSTSSQVQAAIRSSGGNKTSFAEGIEPSIIYVRFKAAANELKPILEEIESRTPRKEYIQLLEECHKLYCEQRLSLIRGIVQQRISEFSRKEALSSLTRSGCAYLMQVCQLEHQLFNHFFPSSSEDISSLTPLVDPLCTFLYDTSRPKLIHETNLDVLCELVNILKVEVLGEQLSRRRKSLAGLPPTLDRILANVHERLTFRARTYIRDEIANYLPSDEDLGLP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="68167" e_stop="67906"/>
            <exon e_start="67740" e_stop="67678"/>
            <exon e_start="67596" e_stop="67495"/>
            <exon e_start="67326" e_stop="67222"/>
            <exon e_start="67111" e_stop="67019"/>
            <exon e_start="66481" e_stop="66393"/>
            <exon e_start="62576" e_stop="62357"/>
            <exon e_start="61986" e_stop="61966"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.630" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.924" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.906" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.836" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.969" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="68167" e_stop="67906" e_length="262"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.630">
            <gDNA_intron_boundary i_start="67905" i_stop="67741" i_length="165"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="67740" e_stop="67678" e_length="63"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.924">
            <gDNA_intron_boundary i_start="67677" i_stop="67597" i_length="81"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="67596" e_stop="67495" e_length="102"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.000">
            <gDNA_intron_boundary i_start="67494" i_stop="67327" i_length="168"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="67326" e_stop="67222" e_length="105"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.990">
            <gDNA_intron_boundary i_start="67221" i_stop="67112" i_length="110"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="67111" e_stop="67019" e_length="93"/>
          </exon>
          <intron i_serial="5" don_prob="0.931" acc_prob="0.906">
            <gDNA_intron_boundary i_start="67018" i_stop="66482" i_length="537"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="66481" e_stop="66393" e_length="89"/>
          </exon>
          <intron i_serial="6" don_prob="0.980" acc_prob="0.836">
            <gDNA_intron_boundary i_start="66392" i_stop="62577" i_length="3816"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="62576" e_stop="62357" e_length="220"/>
          </exon>
          <intron i_serial="7" don_prob="0.997" acc_prob="0.969">
            <gDNA_intron_boundary i_start="62356" i_stop="61987" i_length="370"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="61986" e_stop="61966" e_length="21"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68167" stop="67906"/>
              <exon start="67740" stop="67678"/>
              <exon start="67596" stop="67495"/>
              <exon start="67326" stop="67222"/>
              <exon start="67111" stop="67019"/>
              <exon start="66481" stop="66393"/>
              <exon start="62576" stop="62537"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E687822" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68164" stop="67906"/>
              <exon start="67740" stop="67678"/>
              <exon start="67596" stop="67495"/>
              <exon start="67326" stop="67222"/>
              <exon start="67111" stop="67019"/>
              <exon start="66481" stop="66433"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327185" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67594" stop="67495"/>
              <exon start="67326" stop="67222"/>
              <exon start="67111" stop="67019"/>
              <exon start="66481" stop="66393"/>
              <exon start="62576" stop="62357"/>
              <exon start="61986" stop="61966"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265693" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67594" stop="67495"/>
              <exon start="67326" stop="67222"/>
              <exon start="67111" stop="67019"/>
              <exon start="66481" stop="66393"/>
              <exon start="62576" stop="62422"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266187" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CACTGCAATGTTGTACCATCCATGCTTTTCTTTGGTTATTTGTGAAGTTTACTATGTGGACATGTCTAGAGTCACAGGTTTCTTCTAGGGATATGACTTCTTTTATCAAGATTAAGTTCTATTGAGTTAAGCTTGTAAATCTATGCATAAGAGCACAAATAACCTTTGTGTTTCTCCTCTGCATCACTGAAGATATGTAGAGAGTAGTAACCCACAATATGCAGAGTGCAGCATTTATTTGGTCAAGTTTCGACAACTTCAG : TCTCGAGCTCTGGGAATGATTCGCACTCACGTTCTTTCCGTTCTTAGAAGCACTTCTTCTCAG : GTTCAGGCTGCAATAAGAAGCAGCGGTGGTAACAAGACATCTTTTGCCGAGGGTATAGAGCCATCTATAATATATGTACGATTCAAGGCTGCAGCAAATGAG : CTTAAGCCTATCCTGGAGGAAATTGAAAGCAGAACACCTAGAAAAGAGTATATTCAACTTCTTGAAGAATGCCACAAACTCTATTGCGAACAGCGCCTTTCCTTG : ATAAGAGGTATAGTGCAACAGCGGATCTCTGAATTTTCTAGGAAAGAAGCATTGTCGTCTTTAACTAGATCTGGATGTGCATATTTAATGCAG : GTGTGTCAGCTGGAGCATCAACTCTTCAATCACTTCTTTCCATCATCTTCAGAGGACATTTCGAGTTTGACTCCTCTTGTAGATCCTCT : GTGTACTTTCCTCTATGATACATCGCGTCCTAAACTTATTCACGAAACAAACCTGGATGTTCTTTGTGAACTGGTTAATATCCTCAAAGTTGAAGTTCTAGGAGAACAGCTGAGCAGACGGAGGAAGTCATTGGCTGGGTTACCTCCAACGCTAGACAGGATTCTAGCTAATGTTCATGAACGATTAACTTTTCGTGCTCGCACCTATATCCGTGATGAG : GTTATCATGATAGCTTTCTCG</gDNA_template>
            <first_frame> H  C  N  V  V  P  S  M  L  F  F  G  Y  L  *  S  L  L  C  G  H  V  *  S  H  R  F  L  L  G  I  *  L  L  L  S  R  L  S  S  I  E  L  S  L  *  I  Y  A  *  E  H  K  *  P  L  C  F  S  S  A  S  L  K  I  C  R  E  *  *  P  T  I  C  R  V  Q  H  L  F  G  Q  V  S  T  T  S   : V  S  S  S  G  N  D  S  H  S  R  S  F  R  S  *  K  H  F  F  S   : G  S  G  C  N  K  K  Q  R  W  *  Q  D  I  F  C  R  G  Y  R  A  I  Y  N  I  C  T  I  Q  G  C  S  K  *   : A  *  A  Y  P  G  G  N  *  K  Q  N  T  *  K  R  V  Y  S  T  S  *  R  M  P  Q  T  L  L  R  T  A  P  F  L   : D  K  R  Y  S  A  T  A  D  L  *  I  F  *  E  R  S  I  V  V  F  N  *  I  W  M  C  I  F  N  A   : G  V  S  A  G  A  S  T  L  Q  S  L  L  S  I  I  F  R  G  H  F  E  F  D  S  S  C  R  S  S  :  V  Y  F  P  L  *  Y  I  A  S  *  T  Y  S  R  N  K  P  G  C  S  L  *  T  G  *  Y  P  Q  S  *  S  S  R  R  T  A  E  Q  T  E  E  V  I  G  W  V  T  S  N  A  R  Q  D  S  S  *  C  S  *  T  I  N  F  S  C  S  H  L  Y  P  *  *   : G  Y  H  D  S  F  L  </first_frame>
            <second_frame>  T  A  M  L  Y  H  P  C  F  S  L  V  I  C  E  V  Y  Y  V  D  M  S  R  V  T  G  F  F  *  G  Y  D  F  F  Y  Q  D  *  V  L  L  S  *  A  C  K  S  M  H  K  S  T  N  N  L  C  V  S  P  L  H  H  *  R  Y  V  E  S  S  N  P  Q  Y  A  E  C  S  I  Y  L  V  K  F  R  Q  L  Q  :  S  R  A  L  G  M  I  R  T  H  V  L  S  V  L  R  S  T  S  S  Q  :  V  Q  A  A  I  R  S  S  G  G  N  K  T  S  F  A  E  G  I  E  P  S  I  I  Y  V  R  F  K  A  A  A  N  E  :  L  K  P  I  L  E  E  I  E  S  R  T  P  R  K  E  Y  I  Q  L  L  E  E  C  H  K  L  Y  C  E  Q  R  L  S  L  :  I  R  G  I  V  Q  Q  R  I  S  E  F  S  R  K  E  A  L  S  S  L  T  R  S  G  C  A  Y  L  M  Q  :  V  C  Q  L  E  H  Q  L  F  N  H  F  F  P  S  S  S  E  D  I  S  S  L  T  P  L  V  D  P  L :   C  T  F  L  Y  D  T  S  R  P  K  L  I  H  E  T  N  L  D  V  L  C  E  L  V  N  I  L  K  V  E  V  L  G  E  Q  L  S  R  R  R  K  S  L  A  G  L  P  P  T  L  D  R  I  L  A  N  V  H  E  R  L  T  F  R  A  R  T  Y  I  R  D  E  :  V  I  M  I  A  F  S </second_frame>
            <third_frame>   L  Q  C  C  T  I  H  A  F  L  W  L  F  V  K  F  T  M  W  T  C  L  E  S  Q  V  S  S  R  D  M  T  S  F  I  K  I  K  F  Y  *  V  K  L  V  N  L  C  I  R  A  Q  I  T  F  V  F  L  L  C  I  T  E  D  M  *  R  V  V  T  H  N  M  Q  S  A  A  F  I  W  S  S  F  D  N  F  S :   L  E  L  W  E  *  F  A  L  T  F  F  P  F  L  E  A  L  L  L  R :   F  R  L  Q  *  E  A  A  V  V  T  R  H  L  L  P  R  V  *  S  H  L  *  Y  M  Y  D  S  R  L  Q  Q  M  S :   L  S  L  S  W  R  K  L  K  A  E  H  L  E  K  S  I  F  N  F  L  K  N  A  T  N  S  I  A  N  S  A  F  P  * :   *  E  V  *  C  N  S  G  S  L  N  F  L  G  K  K  H  C  R  L  *  L  D  L  D  V  H  I  *  C  R :   C  V  S  W  S  I  N  S  S  I  T  S  F  H  H  L  Q  R  T  F  R  V  *  L  L  L  *  I  L   : C  V  L  S  S  M  I  H  R  V  L  N  L  F  T  K  Q  T  W  M  F  F  V  N  W  L  I  S  S  K  L  K  F  *  E  N  S  *  A  D  G  G  S  H  W  L  G  Y  L  Q  R  *  T  G  F  *  L  M  F  M  N  D  *  L  F  V  L  A  P  I  S  V  M  R :   L  S  *  *  L  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLe0008H22.2" strand="-"/>
                <serials PGL_serial="6" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67977" stop="67906"/>
                    <exon start="67740" stop="67678"/>
                    <exon start="67596" stop="67495"/>
                    <exon start="67326" stop="67222"/>
                    <exon start="67111" stop="67019"/>
                    <exon start="66481" stop="66393"/>
                    <exon start="62576" stop="62357"/>
                    <exon start="61986" stop="61966"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>765</number_coding_nucleotides>
                  <number_encoded_amino_acids>255</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RYVESSNPQYAECSIYLVKFRQLQSRALGMIRTHVLSVLRSTSSQVQAAIRSSGGNKTSFAEGIEPSIIYVRFKAAANELKPILEEIESRTPRKEYIQLLEECHKLYCEQRLSLIRGIVQQRISEFSRKEALSSLTRSGCAYLMQVCQLEHQLFNHFFPSSSEDISSLTPLVDPLCTFLYDTSRPKLIHETNLDVLCELVNILKVEVLGEQLSRRRKSLAGLPPTLDRILANVHERLTFRARTYIRDEVIMIAFS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="77598" e_stop="77233"/>
            <exon e_start="72102" e_stop="72019"/>
            <exon e_start="71934" e_stop="71833"/>
            <exon e_start="70226" e_stop="70182"/>
            <exon e_start="70064" e_stop="69990"/>
            <exon e_start="69871" e_stop="69757"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.986" e_score="0.997"/>
          <exon-intron don_prob="0.992" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.959" acc_prob="0.847" e_score="1.000"/>
          <exon-intron don_prob="0.914" acc_prob="0.917" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="77598" e_stop="77233" e_length="366"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.986">
            <gDNA_intron_boundary i_start="77232" i_stop="72103" i_length="5130"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="72102" e_stop="72019" e_length="84"/>
          </exon>
          <intron i_serial="2" don_prob="0.992" acc_prob="0.997">
            <gDNA_intron_boundary i_start="72018" i_stop="71935" i_length="84"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="71934" e_stop="71833" e_length="102"/>
          </exon>
          <intron i_serial="3" don_prob="0.980" acc_prob="0.997">
            <gDNA_intron_boundary i_start="71832" i_stop="70227" i_length="1606"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="70226" e_stop="70182" e_length="45"/>
          </exon>
          <intron i_serial="4" don_prob="0.959" acc_prob="0.847">
            <gDNA_intron_boundary i_start="70181" i_stop="70065" i_length="117"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="70064" e_stop="69990" e_length="75"/>
          </exon>
          <intron i_serial="5" don_prob="0.914" acc_prob="0.917">
            <gDNA_intron_boundary i_start="69989" i_stop="69872" i_length="118"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="69871" e_stop="69757" e_length="115"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77598" stop="77233"/>
              <exon start="72102" stop="72019"/>
              <exon start="71934" stop="71833"/>
              <exon start="70226" stop="70182"/>
              <exon start="70064" stop="69990"/>
              <exon start="69871" stop="69757"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E719677" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77591" stop="77233"/>
              <exon start="72102" stop="72019"/>
              <exon start="71934" stop="71874"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E394131" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77590" stop="77233"/>
              <exon start="72102" stop="72019"/>
              <exon start="71934" stop="71833"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E330382" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77444" stop="77233"/>
              <exon start="72102" stop="72019"/>
              <exon start="71934" stop="71885"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E330878" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGGAAAACCCAAAGCTAAGCCAGAGGATCATCCCAGATCTCCAACTTCATCGTTCAAATCACCCTTTTTTTCAACTTCGAAGTCGAAATTGCTTCCATTGAAGCTCCAAAATCCATATGGTGATGGCTACAATCATCTGTAGTATTGATTGTTTTGGTATCAGTAATTGACTAGTTACTACACAGTCCGTTTCCCCCTCATTTTTCATCAATTCTGTTTCGTTTTACTTTTTACACGAACAGAAACAGTTGCAAAGTAGTGGAAGAAGAGAGTGATGATAATACTATGGCGGCAACGACAAGGCCGGGGGTTCTCAAGTCCGAAGCTGTTTCCAAAGGCTATAATTTCGCTTCTACTTGGGAACAG : AATGCTCTGTTAACAGAGCAACAATCAGCAGCCATACAAGCACTTTCCCATGCAGTTGCCGAGAGACCTTTCCCGTCCAATTTG : GACCAAGTTTCTGGACATGATAACAGCCTCTCTGTTTCAACAAAGCTTAGTTCTCTAGAGGATTCAGGGGCCATTGAAGCAGTCCTAGTGAATACAAATCAG : TTTTATAAGTGGTTCGCGGATCTTGAAGCAGCCATGAAATTAGAG : TCTGAAGAAAAATATCAGCATTATGCCAGCACCTTAACAGAGCAGATTCAGACCTGCGATAGTATACTTCACCAG : GTGGATGAAACACTTGACTTGTTCAATGAGTTGCAATTGCAGCATCAAGCAGTGGCAACAAAGACAAGAACTCTTCATGATGCGTGCGATAGACTGGTGTGTCAACCCATTTCTC</gDNA_template>
            <first_frame> R  K  T  Q  S  *  A  R  G  S  S  Q  I  S  N  F  I  V  Q  I  T  L  F  F  N  F  E  V  E  I  A  S  I  E  A  P  K  S  I  W  *  W  L  Q  S  S  V  V  L  I  V  L  V  S  V  I  D  *  L  L  H  S  P  F  P  P  H  F  S  S  I  L  F  R  F  T  F  Y  T  N  R  N  S  C  K  V  V  E  E  E  S  D  D  N  T  M  A  A  T  T  R  P  G  V  L  K  S  E  A  V  S  K  G  Y  N  F  A  S  T  W  E  Q  :  N  A  L  L  T  E  Q  Q  S  A  A  I  Q  A  L  S  H  A  V  A  E  R  P  F  P  S  N  L  :  D  Q  V  S  G  H  D  N  S  L  S  V  S  T  K  L  S  S  L  E  D  S  G  A  I  E  A  V  L  V  N  T  N  Q  :  F  Y  K  W  F  A  D  L  E  A  A  M  K  L  E  :  S  E  E  K  Y  Q  H  Y  A  S  T  L  T  E  Q  I  Q  T  C  D  S  I  L  H  Q  :  V  D  E  T  L  D  L  F  N  E  L  Q  L  Q  H  Q  A  V  A  T  K  T  R  T  L  H  D  A  C  D  R  L  V  C  Q  P  I  S  </first_frame>
            <second_frame>  G  K  P  K  A  K  P  E  D  H  P  R  S  P  T  S  S  F  K  S  P  F  F  S  T  S  K  S  K  L  L  P  L  K  L  Q  N  P  Y  G  D  G  Y  N  H  L  *  Y  *  L  F  W  Y  Q  *  L  T  S  Y  Y  T  V  R  F  P  L  I  F  H  Q  F  C  F  V  L  L  F  T  R  T  E  T  V  A  K  *  W  K  K  R  V  M  I  I  L  W  R  Q  R  Q  G  R  G  F  S  S  P  K  L  F  P  K  A  I  I  S  L  L  L  G  N  R :   M  L  C  *  Q  S  N  N  Q  Q  P  Y  K  H  F  P  M  Q  L  P  R  D  L  S  R  P  I  W :   T  K  F  L  D  M  I  T  A  S  L  F  Q  Q  S  L  V  L  *  R  I  Q  G  P  L  K  Q  S  *  *  I  Q  I  S :   F  I  S  G  S  R  I  L  K  Q  P  *  N  *  S :   L  K  K  N  I  S  I  M  P  A  P  *  Q  S  R  F  R  P  A  I  V  Y  F  T  R :   W  M  K  H  L  T  C  S  M  S  C  N  C  S  I  K  Q  W  Q  Q  R  Q  E  L  F  M  M  R  A  I  D  W  C  V  N  P  F  L </second_frame>
            <third_frame>   E  N  P  K  L  S  Q  R  I  I  P  D  L  Q  L  H  R  S  N  H  P  F  F  Q  L  R  S  R  N  C  F  H  *  S  S  K  I  H  M  V  M  A  T  I  I  C  S  I  D  C  F  G  I  S  N  *  L  V  T  T  Q  S  V  S  P  S  F  F  I  N  S  V  S  F  Y  F  L  H  E  Q  K  Q  L  Q  S  S  G  R  R  E  *  *  *  Y  Y  G  G  N  D  K  A  G  G  S  Q  V  R  S  C  F  Q  R  L  *  F  R  F  Y  L  G  T   : E  C  S  V  N  R  A  T  I  S  S  H  T  S  T  F  P  C  S  C  R  E  T  F  P  V  Q  F   : G  P  S  F  W  T  *  *  Q  P  L  C  F  N  K  A  *  F  S  R  G  F  R  G  H  *  S  S  P  S  E  Y  K  S   : V  L  *  V  V  R  G  S  *  S  S  H  E  I  R   : V  *  R  K  I  S  A  L  C  Q  H  L  N  R  A  D  S  D  L  R  *  Y  T  S  P   : G  G  *  N  T  *  L  V  Q  *  V  A  I  A  A  S  S  S  G  N  K  D  K  N  S  S  *  C  V  R  *  T  G  V  S  T  H  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLe0008H22.2" strand="-"/>
                <serials PGL_serial="6" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="77424" stop="77233"/>
                    <exon start="72102" stop="72019"/>
                    <exon start="71934" stop="71833"/>
                    <exon start="70226" stop="70182"/>
                    <exon start="70064" stop="69990"/>
                    <exon start="69871" stop="69758"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>612</number_coding_nucleotides>
                  <number_encoded_amino_acids>204</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLHSPFPPHFSSILFRFTFYTNRNSCKVVEEESDDNTMAATTRPGVLKSEAVSKGYNFASTWEQNALLTEQQSAAIQALSHAVAERPFPSNLDQVSGHDNSLSVSTKLSSLEDSGAIEAVLVNTNQFYKWFADLEAAMKLESEEKYQHYASTLTEQIQTCDSILHQVDETLDLFNELQLQHQAVATKTRTLHDACDRLVCQPIS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="67778" e_stop="67678"/>
            <exon e_start="67596" e_stop="67495"/>
            <exon e_start="67326" e_stop="67222"/>
            <exon e_start="67111" e_stop="67019"/>
            <exon e_start="66481" e_stop="66393"/>
            <exon e_start="62576" e_stop="62357"/>
            <exon e_start="61986" e_stop="61966"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.924" e_score="0.861"/>
          <exon-intron don_prob="0.997" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.906" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.836" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.969" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.861">
            <gDNA_exon_boundary e_start="67778" e_stop="67678" e_length="101"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.924">
            <gDNA_intron_boundary i_start="67677" i_stop="67597" i_length="81"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="67596" e_stop="67495" e_length="102"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.000">
            <gDNA_intron_boundary i_start="67494" i_stop="67327" i_length="168"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="67326" e_stop="67222" e_length="105"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.990">
            <gDNA_intron_boundary i_start="67221" i_stop="67112" i_length="110"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="67111" e_stop="67019" e_length="93"/>
          </exon>
          <intron i_serial="4" don_prob="0.931" acc_prob="0.906">
            <gDNA_intron_boundary i_start="67018" i_stop="66482" i_length="537"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="66481" e_stop="66393" e_length="89"/>
          </exon>
          <intron i_serial="5" don_prob="0.980" acc_prob="0.836">
            <gDNA_intron_boundary i_start="66392" i_stop="62577" i_length="3816"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="62576" e_stop="62357" e_length="220"/>
          </exon>
          <intron i_serial="6" don_prob="0.997" acc_prob="0.969">
            <gDNA_intron_boundary i_start="62356" i_stop="61987" i_length="370"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="61986" e_stop="61966" e_length="21"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67778" stop="67678"/>
              <exon start="67596" stop="67495"/>
              <exon start="67326" stop="67222"/>
              <exon start="67111" stop="67019"/>
              <exon start="66481" stop="66393"/>
              <exon start="62576" stop="62496"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249802" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67594" stop="67495"/>
              <exon start="67326" stop="67222"/>
              <exon start="67111" stop="67019"/>
              <exon start="66481" stop="66393"/>
              <exon start="62576" stop="62357"/>
              <exon start="61986" stop="61966"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265693" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67594" stop="67495"/>
              <exon start="67326" stop="67222"/>
              <exon start="67111" stop="67019"/>
              <exon start="66481" stop="66393"/>
              <exon start="62576" stop="62422"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266187" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="5" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCTCTCTGTCTGTGTTACCTTGGCCCCCTTGTAACAGTCTCGAGCTCTGGGAATGATTCGCACTCACGTTCTTTCCGTTCTTAGAAGCACTTCTTCTCAG : GTTCAGGCTGCAATAAGAAGCAGCGGTGGTAACAAGACATCTTTTGCCGAGGGTATAGAGCCATCTATAATATATGTACGATTCAAGGCTGCAGCAAATGAG : CTTAAGCCTATCCTGGAGGAAATTGAAAGCAGAACACCTAGAAAAGAGTATATTCAACTTCTTGAAGAATGCCACAAACTCTATTGCGAACAGCGCCTTTCCTTG : ATAAGAGGTATAGTGCAACAGCGGATCTCTGAATTTTCTAGGAAAGAAGCATTGTCGTCTTTAACTAGATCTGGATGTGCATATTTAATGCAG : GTGTGTCAGCTGGAGCATCAACTCTTCAATCACTTCTTTCCATCATCTTCAGAGGACATTTCGAGTTTGACTCCTCTTGTAGATCCTCT : GTGTACTTTCCTCTATGATACATCGCGTCCTAAACTTATTCACGAAACAAACCTGGATGTTCTTTGTGAACTGGTTAATATCCTCAAAGTTGAAGTTCTAGGAGAACAGCTGAGCAGACGGAGGAAGTCATTGGCTGGGTTACCTCCAACGCTAGACAGGATTCTAGCTAATGTTCATGAACGATTAACTTTTCGTGCTCGCACCTATATCCGTGATGAG : GTTATCATGATAGCTTTCTCG</gDNA_template>
            <first_frame> F  S  L  S  V  L  P  W  P  P  C  N  S  L  E  L  W  E  *  F  A  L  T  F  F  P  F  L  E  A  L  L  L  R :   F  R  L  Q  *  E  A  A  V  V  T  R  H  L  L  P  R  V  *  S  H  L  *  Y  M  Y  D  S  R  L  Q  Q  M  S :   L  S  L  S  W  R  K  L  K  A  E  H  L  E  K  S  I  F  N  F  L  K  N  A  T  N  S  I  A  N  S  A  F  P  * :   *  E  V  *  C  N  S  G  S  L  N  F  L  G  K  K  H  C  R  L  *  L  D  L  D  V  H  I  *  C  R :   C  V  S  W  S  I  N  S  S  I  T  S  F  H  H  L  Q  R  T  F  R  V  *  L  L  L  *  I  L   : C  V  L  S  S  M  I  H  R  V  L  N  L  F  T  K  Q  T  W  M  F  F  V  N  W  L  I  S  S  K  L  K  F  *  E  N  S  *  A  D  G  G  S  H  W  L  G  Y  L  Q  R  *  T  G  F  *  L  M  F  M  N  D  *  L  F  V  L  A  P  I  S  V  M  R :   L  S  *  *  L  S   </first_frame>
            <second_frame>  S  L  C  L  C  Y  L  G  P  L  V  T  V  S  S  S  G  N  D  S  H  S  R  S  F  R  S  *  K  H  F  F  S   : G  S  G  C  N  K  K  Q  R  W  *  Q  D  I  F  C  R  G  Y  R  A  I  Y  N  I  C  T  I  Q  G  C  S  K  *   : A  *  A  Y  P  G  G  N  *  K  Q  N  T  *  K  R  V  Y  S  T  S  *  R  M  P  Q  T  L  L  R  T  A  P  F  L   : D  K  R  Y  S  A  T  A  D  L  *  I  F  *  E  R  S  I  V  V  F  N  *  I  W  M  C  I  F  N  A   : G  V  S  A  G  A  S  T  L  Q  S  L  L  S  I  I  F  R  G  H  F  E  F  D  S  S  C  R  S  S  :  V  Y  F  P  L  *  Y  I  A  S  *  T  Y  S  R  N  K  P  G  C  S  L  *  T  G  *  Y  P  Q  S  *  S  S  R  R  T  A  E  Q  T  E  E  V  I  G  W  V  T  S  N  A  R  Q  D  S  S  *  C  S  *  T  I  N  F  S  C  S  H  L  Y  P  *  *   : G  Y  H  D  S  F  L  </second_frame>
            <third_frame>   L  S  V  C  V  T  L  A  P  L  *  Q  S  R  A  L  G  M  I  R  T  H  V  L  S  V  L  R  S  T  S  S  Q  :  V  Q  A  A  I  R  S  S  G  G  N  K  T  S  F  A  E  G  I  E  P  S  I  I  Y  V  R  F  K  A  A  A  N  E  :  L  K  P  I  L  E  E  I  E  S  R  T  P  R  K  E  Y  I  Q  L  L  E  E  C  H  K  L  Y  C  E  Q  R  L  S  L  :  I  R  G  I  V  Q  Q  R  I  S  E  F  S  R  K  E  A  L  S  S  L  T  R  S  G  C  A  Y  L  M  Q  :  V  C  Q  L  E  H  Q  L  F  N  H  F  F  P  S  S  S  E  D  I  S  S  L  T  P  L  V  D  P  L :   C  T  F  L  Y  D  T  S  R  P  K  L  I  H  E  T  N  L  D  V  L  C  E  L  V  N  I  L  K  V  E  V  L  G  E  Q  L  S  R  R  R  K  S  L  A  G  L  P  P  T  L  D  R  I  L  A  N  V  H  E  R  L  T  F  R  A  R  T  Y  I  R  D  E  :  V  I  M  I  A  F  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLe0008H22.2" strand="-"/>
                <serials PGL_serial="6" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67743" stop="67678"/>
                    <exon start="67596" stop="67495"/>
                    <exon start="67326" stop="67222"/>
                    <exon start="67111" stop="67019"/>
                    <exon start="66481" stop="66393"/>
                    <exon start="62576" stop="62357"/>
                    <exon start="61986" stop="61966"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>696</number_coding_nucleotides>
                  <number_encoded_amino_acids>232</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QSRALGMIRTHVLSVLRSTSSQVQAAIRSSGGNKTSFAEGIEPSIIYVRFKAAANELKPILEEIESRTPRKEYIQLLEECHKLYCEQRLSLIRGIVQQRISEFSRKEALSSLTRSGCAYLMQVCQLEHQLFNHFFPSSSEDISSLTPLVDPLCTFLYDTSRPKLIHETNLDVLCELVNILKVEVLGEQLSRRRKSLAGLPPTLDRILANVHERLTFRARTYIRDEVIMIAFS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
          <exon_coordinates>
            <exon e_start="77644" e_stop="77480"/>
            <exon e_start="77356" e_stop="77233"/>
            <exon e_start="72102" e_stop="72019"/>
            <exon e_start="71934" e_stop="71833"/>
            <exon e_start="70226" e_stop="70182"/>
            <exon e_start="70064" e_stop="69990"/>
            <exon e_start="69871" e_stop="69776"/>
            <exon e_start="69247" e_stop="69170"/>
            <exon e_start="68306" e_stop="68215"/>
            <exon e_start="67967" e_stop="67906"/>
            <exon e_start="67740" e_stop="67696"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.968" acc_prob="0.887" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.959" acc_prob="0.847" e_score="1.000"/>
          <exon-intron don_prob="0.914" acc_prob="0.917" e_score="0.960"/>
          <exon-intron don_prob="0.832" acc_prob="0.926" e_score="0.927"/>
          <exon-intron don_prob="0.920" acc_prob="0.998" e_score="0.987"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.946"/>
          <exon-intron don_prob="0.995" acc_prob="0.630" e_score="0.952"/>
          <exon-only e_score="0.933"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="77644" e_stop="77480" e_length="165"/>
          </exon>
          <intron i_serial="1" don_prob="0.968" acc_prob="0.887">
            <gDNA_intron_boundary i_start="77479" i_stop="77357" i_length="123"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="77356" e_stop="77233" e_length="124"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.986">
            <gDNA_intron_boundary i_start="77232" i_stop="72103" i_length="5130"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="72102" e_stop="72019" e_length="84"/>
          </exon>
          <intron i_serial="3" don_prob="0.992" acc_prob="0.997">
            <gDNA_intron_boundary i_start="72018" i_stop="71935" i_length="84"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="71934" e_stop="71833" e_length="102"/>
          </exon>
          <intron i_serial="4" don_prob="0.980" acc_prob="0.997">
            <gDNA_intron_boundary i_start="71832" i_stop="70227" i_length="1606"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="70226" e_stop="70182" e_length="45"/>
          </exon>
          <intron i_serial="5" don_prob="0.959" acc_prob="0.847">
            <gDNA_intron_boundary i_start="70181" i_stop="70065" i_length="117"/>
          </intron>
          <exon e_serial="6" e_score="0.960">
            <gDNA_exon_boundary e_start="70064" e_stop="69990" e_length="75"/>
          </exon>
          <intron i_serial="6" don_prob="0.914" acc_prob="0.917">
            <gDNA_intron_boundary i_start="69989" i_stop="69872" i_length="118"/>
          </intron>
          <exon e_serial="7" e_score="0.927">
            <gDNA_exon_boundary e_start="69871" e_stop="69776" e_length="96"/>
          </exon>
          <intron i_serial="7" don_prob="0.832" acc_prob="0.926">
            <gDNA_intron_boundary i_start="69775" i_stop="69248" i_length="528"/>
          </intron>
          <exon e_serial="8" e_score="0.987">
            <gDNA_exon_boundary e_start="69247" e_stop="69170" e_length="78"/>
          </exon>
          <intron i_serial="8" don_prob="0.920" acc_prob="0.998">
            <gDNA_intron_boundary i_start="69169" i_stop="68307" i_length="863"/>
          </intron>
          <exon e_serial="9" e_score="0.946">
            <gDNA_exon_boundary e_start="68306" e_stop="68215" e_length="92"/>
          </exon>
          <intron i_serial="9" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="68214" i_stop="67968" i_length="247"/>
          </intron>
          <exon e_serial="10" e_score="0.952">
            <gDNA_exon_boundary e_start="67967" e_stop="67906" e_length="62"/>
          </exon>
          <intron i_serial="10" don_prob="0.995" acc_prob="0.630">
            <gDNA_intron_boundary i_start="67905" i_stop="67741" i_length="165"/>
          </intron>
          <exon e_serial="11" e_score="0.933">
            <gDNA_exon_boundary e_start="67740" e_stop="67696" e_length="45"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77644" stop="77480"/>
              <exon start="77356" stop="77233"/>
              <exon start="72102" stop="72019"/>
              <exon start="71934" stop="71833"/>
              <exon start="70226" stop="70182"/>
              <exon start="70064" stop="70041"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329746" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77321" stop="77233"/>
              <exon start="72102" stop="72019"/>
              <exon start="71934" stop="71833"/>
              <exon start="70226" stop="70182"/>
              <exon start="70064" stop="69990"/>
              <exon start="69871" stop="69776"/>
              <exon start="69247" stop="69170"/>
              <exon start="68306" stop="68215"/>
              <exon start="67967" stop="67906"/>
              <exon start="67740" stop="67696"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E454663" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77321" stop="77233"/>
              <exon start="72102" stop="72019"/>
              <exon start="71934" stop="71833"/>
              <exon start="70226" stop="70182"/>
              <exon start="70064" stop="69990"/>
              <exon start="69871" stop="69776"/>
              <exon start="69247" stop="69170"/>
              <exon start="68306" stop="68215"/>
              <exon start="67967" stop="67906"/>
              <exon start="67740" stop="67711"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E454964" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="6" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGAATTTTGAAGAAAAGGAACGTCGTTACTGTAATTTTCATATGAGCGGAAAACCCAAAGCTAAGCCAGAGGATCATCCCAGATCTCCAACTTCATCGTTCAAATCACCCTTTTTTTCAACTTCGAAGTCGAAATTGCTTCCATTGAAGCTCCAAAATCCATATG : AAACAGTTGCAAAGTAGTGGAAGAAGAGAGTGATGATAATACTATGGCGGCAACGACAAGGCCGGGGGTTCTCAAGTCCGAAGCTGTTTCCAAAGGCTATAATTTCGCTTCTACTTGGGAACAG : AATGCTCTGTTAACAGAGCAACAATCAGCAGCCATACAAGCACTTTCCCATGCAGTTGCCGAGAGACCTTTCCCGTCCAATTTG : GACCAAGTTTCTGGACATGATAACAGCCTCTCTGTTTCAACAAAGCTTAGTTCTCTAGAGGATTCAGGGGCCATTGAAGCAGTCCTAGTGAATACAAATCAG : TTTTATAAGTGGTTCGCGGATCTTGAAGCAGCCATGAAATTAGAG : TCTGAAGAAAAATATCAGCATTATGCCAGCACCTTAACAGAGCAGATTCAGACCTGCGATAGTATACTTCACCAG : GTGGATGAAACACTTGACTTGTTCAATGAGTTGCAATTGCAGCATCAAGCAGTGGCAACAAAGACAAGAACTCTTCATGATGCGTGCGATAGACTG : CTTTTGGAGAAGCAGAAAATAATTGAGTTTGCAGAATCACTTCACAATAAGCTCAATTACTTTGATGAATTGGAGAAT : GTTGCTACCACTTTTTATTCTCCTAGCATGAGCGTTGGTAGTACAAATTTTCTTCCATTGCTAAAGAGACTTGATGAGTGCATATCCTAAGT : AGAGTAGTAACCCACAATATGCAGAGTGCAGCATTTATTTGGTCAAGTTTCGACAACTTCAG : TCTCGAGCTCTGGGAATGATTCGCACTCACGTTCTTTCCGTTCTT</gDNA_template>
            <first_frame> *  I  L  K  K  R  N  V  V  T  V  I  F  I  *  A  E  N  P  K  L  S  Q  R  I  I  P  D  L  Q  L  H  R  S  N  H  P  F  F  Q  L  R  S  R  N  C  F  H  *  S  S  K  I  H  M  :  K  Q  L  Q  S  S  G  R  R  E  *  *  *  Y  Y  G  G  N  D  K  A  G  G  S  Q  V  R  S  C  F  Q  R  L  *  F  R  F  Y  L  G  T   : E  C  S  V  N  R  A  T  I  S  S  H  T  S  T  F  P  C  S  C  R  E  T  F  P  V  Q  F   : G  P  S  F  W  T  *  *  Q  P  L  C  F  N  K  A  *  F  S  R  G  F  R  G  H  *  S  S  P  S  E  Y  K  S   : V  L  *  V  V  R  G  S  *  S  S  H  E  I  R   : V  *  R  K  I  S  A  L  C  Q  H  L  N  R  A  D  S  D  L  R  *  Y  T  S  P   : G  G  *  N  T  *  L  V  Q  *  V  A  I  A  A  S  S  S  G  N  K  D  K  N  S  S  *  C  V  R  *  T   : A  F  G  E  A  E  N  N  *  V  C  R  I  T  S  Q  *  A  Q  L  L  *  *  I  G  E   : C  C  Y  H  F  L  F  S  *  H  E  R  W  *  Y  K  F  S  S  I  A  K  E  T  *  *  V  H  I  L  S  :  R  V  V  T  H  N  M  Q  S  A  A  F  I  W  S  S  F  D  N  F  S :   L  E  L  W  E  *  F  A  L  T  F  F  P  F   </first_frame>
            <second_frame>  E  F  *  R  K  G  T  S  L  L  *  F  S  Y  E  R  K  T  Q  S  *  A  R  G  S  S  Q  I  S  N  F  I  V  Q  I  T  L  F  F  N  F  E  V  E  I  A  S  I  E  A  P  K  S  I  * :   N  S  C  K  V  V  E  E  E  S  D  D  N  T  M  A  A  T  T  R  P  G  V  L  K  S  E  A  V  S  K  G  Y  N  F  A  S  T  W  E  Q  :  N  A  L  L  T  E  Q  Q  S  A  A  I  Q  A  L  S  H  A  V  A  E  R  P  F  P  S  N  L  :  D  Q  V  S  G  H  D  N  S  L  S  V  S  T  K  L  S  S  L  E  D  S  G  A  I  E  A  V  L  V  N  T  N  Q  :  F  Y  K  W  F  A  D  L  E  A  A  M  K  L  E  :  S  E  E  K  Y  Q  H  Y  A  S  T  L  T  E  Q  I  Q  T  C  D  S  I  L  H  Q  :  V  D  E  T  L  D  L  F  N  E  L  Q  L  Q  H  Q  A  V  A  T  K  T  R  T  L  H  D  A  C  D  R  L  :  L  L  E  K  Q  K  I  I  E  F  A  E  S  L  H  N  K  L  N  Y  F  D  E  L  E  N  :  V  A  T  T  F  Y  S  P  S  M  S  V  G  S  T  N  F  L  P  L  L  K  R  L  D  E  C  I  S  *  V :   E  *  *  P  T  I  C  R  V  Q  H  L  F  G  Q  V  S  T  T  S   : V  S  S  S  G  N  D  S  H  S  R  S  F  R  S  </second_frame>
            <third_frame>   N  F  E  E  K  E  R  R  Y  C  N  F  H  M  S  G  K  P  K  A  K  P  E  D  H  P  R  S  P  T  S  S  F  K  S  P  F  F  S  T  S  K  S  K  L  L  P  L  K  L  Q  N  P  Y   : E  T  V  A  K  *  W  K  K  R  V  M  I  I  L  W  R  Q  R  Q  G  R  G  F  S  S  P  K  L  F  P  K  A  I  I  S  L  L  L  G  N  R :   M  L  C  *  Q  S  N  N  Q  Q  P  Y  K  H  F  P  M  Q  L  P  R  D  L  S  R  P  I  W :   T  K  F  L  D  M  I  T  A  S  L  F  Q  Q  S  L  V  L  *  R  I  Q  G  P  L  K  Q  S  *  *  I  Q  I  S :   F  I  S  G  S  R  I  L  K  Q  P  *  N  *  S :   L  K  K  N  I  S  I  M  P  A  P  *  Q  S  R  F  R  P  A  I  V  Y  F  T  R :   W  M  K  H  L  T  C  S  M  S  C  N  C  S  I  K  Q  W  Q  Q  R  Q  E  L  F  M  M  R  A  I  D  C :   F  W  R  S  R  K  *  L  S  L  Q  N  H  F  T  I  S  S  I  T  L  M  N  W  R  M :   L  L  P  L  F  I  L  L  A  *  A  L  V  V  Q  I  F  F  H  C  *  R  D  L  M  S  A  Y  P  K   : *  S  S  N  P  Q  Y  A  E  C  S  I  Y  L  V  K  F  R  Q  L  Q  :  S  R  A  L  G  M  I  R  T  H  V  L  S  V  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLe0008H22.2" strand="-"/>
                <serials PGL_serial="6" AGS_serial="6" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="77355" stop="77233"/>
                    <exon start="72102" stop="72019"/>
                    <exon start="71934" stop="71833"/>
                    <exon start="70226" stop="70182"/>
                    <exon start="70064" stop="69990"/>
                    <exon start="69871" stop="69776"/>
                    <exon start="69247" stop="69170"/>
                    <exon start="68306" stop="68217"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>690</number_coding_nucleotides>
                  <number_encoded_amino_acids>230</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NSCKVVEEESDDNTMAATTRPGVLKSEAVSKGYNFASTWEQNALLTEQQSAAIQALSHAVAERPFPSNLDQVSGHDNSLSVSTKLSSLEDSGAIEAVLVNTNQFYKWFADLEAAMKLESEEKYQHYASTLTEQIQTCDSILHQVDETLDLFNELQLQHQAVATKTRTLHDACDRLLLEKQKIIEFAESLHNKLNYFDELENVATTFYSPSMSVGSTNFLPLLKRLDECIS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="7">
          <exon_coordinates>
            <exon e_start="68857" e_stop="68389"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.968"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.968">
            <gDNA_exon_boundary e_start="68857" e_stop="68389" e_length="469"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68857" stop="68389"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E330789" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="7" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTAAATAAAGCTTTGGTTCTAGATTGTTTTCTTCCTCATGTTACAAATGAGTCACCCAAAGCTATTCTGTCTTGGCTTTTCCAATCTAGTTCTTTTGGATTATTTTGATGTTCTTGCTTAGCGAGTTATTTATTTAAGATGATTTTTTTAATCTCGTCTTTTGGTCAACTCTTCTTTCTCCTATTTATGTGCTTGGTGGTTTCTAAAGGAAAACTTTTTCACTTGTGAGATTGAGAATGAGAGTTCCTGTTTTAATTTTTTTTTTTTGGAACTGAGAGTTCCTTTTTTTAAATTCCTTAAAGAGGAATAGCTTTTCACTCTCTACTGTACATATTCTTGATTTAATCATGACCATTAGACTAAAATTTTCTAATTCCTTTTTGTTTAATTACATCTAATTGGTGTATCAACTTGATTTGTCTTGTGCTAAATTTTCTCTTCAAGTCCTGCTCTTCTCCTACTTGAACTT</gDNA_template>
            <first_frame> V  N  K  A  L  V  L  D  C  F  L  P  H  V  T  N  E  S  P  K  A  I  L  S  W  L  F  Q  S  S  S  F  G  L  F  *  C  S  C  L  A  S  Y  L  F  K  M  I  F  L  I  S  S  F  G  Q  L  F  F  L  L  F  M  C  L  V  V  S  K  G  K  L  F  H  L  *  D  *  E  *  E  F  L  F  *  F  F  F  F  G  T  E  S  S  F  F  *  I  P  *  R  G  I  A  F  H  S  L  L  Y  I  F  L  I  *  S  *  P  L  D  *  N  F  L  I  P  F  C  L  I  T  S  N  W  C  I  N  L  I  C  L  V  L  N  F  L  F  K  S  C  S  S  P  T  *  T  </first_frame>
            <second_frame>  *  I  K  L  W  F  *  I  V  F  F  L  M  L  Q  M  S  H  P  K  L  F  C  L  G  F  S  N  L  V  L  L  D  Y  F  D  V  L  A  *  R  V  I  Y  L  R  *  F  F  *  S  R  L  L  V  N  S  S  F  S  Y  L  C  A  W  W  F  L  K  E  N  F  F  T  C  E  I  E  N  E  S  S  C  F  N  F  F  F  L  E  L  R  V  P  F  F  K  F  L  K  E  E  *  L  F  T  L  Y  C  T  Y  S  *  F  N  H  D  H  *  T  K  I  F  *  F  L  F  V  *  L  H  L  I  G  V  S  T  *  F  V  L  C  *  I  F  S  S  S  P  A  L  L  L  L  E  L </second_frame>
            <third_frame>   K  *  S  F  G  S  R  L  F  S  S  S  C  Y  K  *  V  T  Q  S  Y  S  V  L  A  F  P  I  *  F  F  W  I  I  L  M  F  L  L  S  E  L  F  I  *  D  D  F  F  N  L  V  F  W  S  T  L  L  S  P  I  Y  V  L  G  G  F  *  R  K  T  F  S  L  V  R  L  R  M  R  V  P  V  L  I  F  F  F  W  N  *  E  F  L  F  L  N  S  L  K  R  N  S  F  S  L  S  T  V  H  I  L  D  L  I  M  T  I  R  L  K  F  S  N  S  F  L  F  N  Y  I  *  L  V  Y  Q  L  D  L  S  C  A  K  F  S  L  Q  V  L  L  F  S  Y  L  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07SLe0008H22.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="74978" PGL_stop="75752"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="74978" e_stop="75752"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.929"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.929">
            <gDNA_exon_boundary e_start="74978" e_stop="75752" e_length="775"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74978" stop="75752"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E487611" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74978" stop="75542"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E427595" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTGAAGCACTTTCTCATTCTAGATGGAGGCAGGCTATGGTTGATGAGATGTCTGCTTTACATAAGAGTGATACTTGGGAGCTTGTCTCCCTTCCTGCATGTAAATCTACTGTTGGTTGTCATTGGGTTTATGCAGTCAAAATTGGTCTAGATGGTTAGGTTGATCGACTTAAGGTTCTCCTTGTCGCCAAAGGGTATACTCAGATATTTGGGCTAGATTATAGTGACACTTTTGCTCCTGTGGCTAAAATAGCATATGTTCGTCTTTTTCTAATCTATGGTTGTTGTTCGTCATTGTCCTCTTTATCAGTTGGACATAAAGAATGCTTTTCTGCTAGTGATCTTGAGGAAGAAGTCTATATGGAGCAACCACCTAGTTTTGTTGCTCAGGGGGAGTCTAGTAGCCTTGTATGTCGATTGCGTAGGTCACTCTATGGTCTGAAACAGTCTCCTCGAGCTTGGTTTGGGAAGTTTAGCACAGTAATTCAGAAGTTTGGCATGACTCGTAATGGATCAAATCACTTTGTGTTTTATCGACATTCTGCACCAGGTCGATGTATCTATTTGGTTGTTTATGTTGATGATATTGTTACCACTGATAATGATCAAGACTATATCACCGATATAAAGCAACATCTTTTTAAGCACTTTCAGACAAAAGACCTTGGTAGATTGAAGTATTTTCTAGGTATTGAGGTTGCTCAATCTAGATCAGGCATTGTTATCTCTAAACACAAGTATGCCTTAGACATTCTTGAGGAGACAGGAATGATGGG</gDNA_template>
            <first_frame> V  K  H  F  L  I  L  D  G  G  R  L  W  L  M  R  C  L  L  Y  I  R  V  I  L  G  S  L  S  P  F  L  H  V  N  L  L  L  V  V  I  G  F  M  Q  S  K  L  V  *  M  V  R  L  I  D  L  R  F  S  L  S  P  K  G  I  L  R  Y  L  G  *  I  I  V  T  L  L  L  L  W  L  K  *  H  M  F  V  F  F  *  S  M  V  V  V  R  H  C  P  L  Y  Q  L  D  I  K  N  A  F  L  L  V  I  L  R  K  K  S  I  W  S  N  H  L  V  L  L  L  R  G  S  L  V  A  L  Y  V  D  C  V  G  H  S  M  V  *  N  S  L  L  E  L  G  L  G  S  L  A  Q  *  F  R  S  L  A  *  L  V  M  D  Q  I  T  L  C  F  I  D  I  L  H  Q  V  D  V  S  I  W  L  F  M  L  M  I  L  L  P  L  I  M  I  K  T  I  S  P  I  *  S  N  I  F  L  S  T  F  R  Q  K  T  L  V  D  *  S  I  F  *  V  L  R  L  L  N  L  D  Q  A  L  L  S  L  N  T  S  M  P  *  T  F  L  R  R  Q  E  *  W  </first_frame>
            <second_frame>  *  S  T  F  S  F  *  M  E  A  G  Y  G  *  *  D  V  C  F  T  *  E  *  Y  L  G  A  C  L  P  S  C  M  *  I  Y  C  W  L  S  L  G  L  C  S  Q  N  W  S  R  W  L  G  *  S  T  *  G  S  P  C  R  Q  R  V  Y  S  D  I  W  A  R  L  *  *  H  F  C  S  C  G  *  N  S  I  C  S  S  F  S  N  L  W  L  L  F  V  I  V  L  F  I  S  W  T  *  R  M  L  F  C  *  *  S  *  G  R  S  L  Y  G  A  T  T  *  F  C  C  S  G  G  V  *  *  P  C  M  S  I  A  *  V  T  L  W  S  E  T  V  S  S  S  L  V  W  E  V  *  H  S  N  S  E  V  W  H  D  S  *  W  I  K  S  L  C  V  L  S  T  F  C  T  R  S  M  Y  L  F  G  C  L  C  *  *  Y  C  Y  H  *  *  *  S  R  L  Y  H  R  Y  K  A  T  S  F  *  A  L  S  D  K  R  P  W  *  I  E  V  F  S  R  Y  *  G  C  S  I  *  I  R  H  C  Y  L  *  T  Q  V  C  L  R  H  S  *  G  D  R  N  D  G </second_frame>
            <third_frame>   E  A  L  S  H  S  R  W  R  Q  A  M  V  D  E  M  S  A  L  H  K  S  D  T  W  E  L  V  S  L  P  A  C  K  S  T  V  G  C  H  W  V  Y  A  V  K  I  G  L  D  G  *  V  D  R  L  K  V  L  L  V  A  K  G  Y  T  Q  I  F  G  L  D  Y  S  D  T  F  A  P  V  A  K  I  A  Y  V  R  L  F  L  I  Y  G  C  C  S  S  L  S  S  L  S  V  G  H  K  E  C  F  S  A  S  D  L  E  E  E  V  Y  M  E  Q  P  P  S  F  V  A  Q  G  E  S  S  S  L  V  C  R  L  R  R  S  L  Y  G  L  K  Q  S  P  R  A  W  F  G  K  F  S  T  V  I  Q  K  F  G  M  T  R  N  G  S  N  H  F  V  F  Y  R  H  S  A  P  G  R  C  I  Y  L  V  V  Y  V  D  D  I  V  T  T  D  N  D  Q  D  Y  I  T  D  I  K  Q  H  L  F  K  H  F  Q  T  K  D  L  G  R  L  K  Y  F  L  G  I  E  V  A  Q  S  R  S  G  I  V  I  S  K  H  K  Y  A  L  D  I  L  E  E  T  G  M  M   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLe0008H22.2" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75136" stop="75750"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>615</number_coding_nucleotides>
                  <number_encoded_amino_acids>205</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VDRLKVLLVAKGYTQIFGLDYSDTFAPVAKIAYVRLFLIYGCCSSLSSLSVGHKECFSASDLEEEVYMEQPPSFVAQGESSSLVCRLRRSLYGLKQSPRAWFGKFSTVIQKFGMTRNGSNHFVFYRHSAPGRCIYLVVYVDDIVTTDNDQDYITDIKQHLFKHFQTKDLGRLKYFLGIEVAQSRSGIVISKHKYALDILEETGMM</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="90147" PGL_stop="86598"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="90147" e_stop="89968"/>
            <exon e_start="88688" e_stop="88544"/>
            <exon e_start="88413" e_stop="88303"/>
            <exon e_start="88218" e_stop="88127"/>
            <exon e_start="88035" e_stop="87941"/>
            <exon e_start="87856" e_stop="87743"/>
            <exon e_start="87320" e_stop="87191"/>
            <exon e_start="87039" e_stop="86918"/>
            <exon e_start="86836" e_stop="86598"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.021" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.952" e_score="1.000"/>
          <exon-intron don_prob="0.894" acc_prob="0.172" e_score="1.000"/>
          <exon-intron don_prob="0.954" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.957" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.941" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.948" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="90147" e_stop="89968" e_length="180"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.021">
            <gDNA_intron_boundary i_start="89967" i_stop="88689" i_length="1279"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="88688" e_stop="88544" e_length="145"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.952">
            <gDNA_intron_boundary i_start="88543" i_stop="88414" i_length="130"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="88413" e_stop="88303" e_length="111"/>
          </exon>
          <intron i_serial="3" don_prob="0.894" acc_prob="0.172">
            <gDNA_intron_boundary i_start="88302" i_stop="88219" i_length="84"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="88218" e_stop="88127" e_length="92"/>
          </exon>
          <intron i_serial="4" don_prob="0.954" acc_prob="0.999">
            <gDNA_intron_boundary i_start="88126" i_stop="88036" i_length="91"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="88035" e_stop="87941" e_length="95"/>
          </exon>
          <intron i_serial="5" don_prob="0.957" acc_prob="1.000">
            <gDNA_intron_boundary i_start="87940" i_stop="87857" i_length="84"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="87856" e_stop="87743" e_length="114"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.981">
            <gDNA_intron_boundary i_start="87742" i_stop="87321" i_length="422"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="87320" e_stop="87191" e_length="130"/>
          </exon>
          <intron i_serial="7" don_prob="0.941" acc_prob="0.996">
            <gDNA_intron_boundary i_start="87190" i_stop="87040" i_length="151"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="87039" e_stop="86918" e_length="122"/>
          </exon>
          <intron i_serial="8" don_prob="0.948" acc_prob="0.000">
            <gDNA_intron_boundary i_start="86917" i_stop="86837" i_length="81"/>
          </intron>
          <exon e_serial="9" e_score="0.996">
            <gDNA_exon_boundary e_start="86836" e_stop="86598" e_length="239"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90147" stop="89968"/>
              <exon start="88688" stop="88544"/>
              <exon start="88413" stop="88303"/>
              <exon start="88218" stop="88127"/>
              <exon start="88035" stop="87941"/>
              <exon start="87856" stop="87743"/>
              <exon start="87320" stop="87191"/>
              <exon start="87039" stop="86918"/>
              <exon start="86836" stop="86598"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744601" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90126" stop="89968"/>
              <exon start="88688" stop="88544"/>
              <exon start="88413" stop="88303"/>
              <exon start="88218" stop="88127"/>
              <exon start="88035" stop="87941"/>
              <exon start="87856" stop="87792"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315132" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TATTTTTGGCGGCTCCTCACGCCTTTGAAATATTTCCTTTTGCCTCCATTCTTCCATTCTCAGTGAGCATCAAGAAAATTAGCAATGGAGCAGCAGCACAGGAATCAGAAGTCGATGCAAGACCAAAATGATGAAATCGAGGATGTTCAACACGGCCCTTTTCCAGTTGAACAACTTCAG : GCATCAGGGATTGCAGCTCTAGATGTAAAAAAACTCAAGGATGCTGGTCTATGTACAGTTGAATCTGTTGTTTATGCTCCAAGAAAGGAACTTCTGCAGATAAAAGGAATTAGTGAAGCTAAAGTTGACAAGATTATTGAGGCAG : CTTCAAAATTAGTGCCTTTGGGATTCACTAGTGCCAGCCAACTCCATGCACAGAGGCTTGAAATCATACAGATAACTTCTGGATCGAAAGAACTTGACAAGATATTAGAAG : GAGGAATCGAAACTGGATCTATTACTGAAATTTACGGAGAGTTCCGATGTGGAAAGACTCAGCTGTGTCACACACTATGCGTGACTTGTCAA : CTTCCATTAGATCAGGGAGGTGGTGAAGGGAAAGCAATGTACATTGATGCTGAGGGTACTTTCAGACCACAAAGACTTTTACAAATTGCAGACAG : GTATGGATTGAATGGTCCTGATGTCCTGGAGAATGTAGCCTATGCTCGAGCTTATAATACCGATCATCAATCAAGACTTTTGCTTGAGGCAGCCTCAATGATGGTGGAGACCAG : GTTTGCTCTCATGATTGTGGACAGTGCTACTGCCCTTTATAGAACTGACTTCTCTGGGAGAGGAGAGTTGTCTGCCAGGCAGATGCATCTTGCAAAGTTTCTGAGAAGCCTTCAGAAGTTAGCAGATGAG : TTTGGTGTTGCTGTTGTTATTACGAACCAAGTTGTTGCTCAAGTGGATGGTTCTGCTGTATTTGCTGGGCCTCAAATAAAACCCATTGGTGGCAACATCATGGCACATGCTTCTACGACGAG : ACTAGCTCTGAGGAAGGGTAGGGCCGAGGAGCGGATTTGTAAAGTAGTCAGTTCGCCATGCTTAGCTGAAGCAGAAGCAAGATTTCAAATTTCTGTTGAAGGAGTCACTGATGTAAAGGACTAAATGTGTGATCAGCACATTGTTTACTACTAGTACTATTTTTTGTTTCCTACTTGGTGTACGATTTTGTCATCGTTTTGAAGGTTAGTTAACCATAAAAAGAAGTATGCTATATGAA</gDNA_template>
            <first_frame> Y  F  W  R  L  L  T  P  L  K  Y  F  L  L  P  P  F  F  H  S  Q  *  A  S  R  K  L  A  M  E  Q  Q  H  R  N  Q  K  S  M  Q  D  Q  N  D  E  I  E  D  V  Q  H  G  P  F  P  V  E  Q  L  Q  :  A  S  G  I  A  A  L  D  V  K  K  L  K  D  A  G  L  C  T  V  E  S  V  V  Y  A  P  R  K  E  L  L  Q  I  K  G  I  S  E  A  K  V  D  K  I  I  E  A   : A  S  K  L  V  P  L  G  F  T  S  A  S  Q  L  H  A  Q  R  L  E  I  I  Q  I  T  S  G  S  K  E  L  D  K  I  L  E   : G  G  I  E  T  G  S  I  T  E  I  Y  G  E  F  R  C  G  K  T  Q  L  C  H  T  L  C  V  T  C  Q  :  L  P  L  D  Q  G  G  G  E  G  K  A  M  Y  I  D  A  E  G  T  F  R  P  Q  R  L  L  Q  I  A  D  R :   Y  G  L  N  G  P  D  V  L  E  N  V  A  Y  A  R  A  Y  N  T  D  H  Q  S  R  L  L  L  E  A  A  S  M  M  V  E  T  R :   F  A  L  M  I  V  D  S  A  T  A  L  Y  R  T  D  F  S  G  R  G  E  L  S  A  R  Q  M  H  L  A  K  F  L  R  S  L  Q  K  L  A  D  E  :  F  G  V  A  V  V  I  T  N  Q  V  V  A  Q  V  D  G  S  A  V  F  A  G  P  Q  I  K  P  I  G  G  N  I  M  A  H  A  S  T  T  R :   L  A  L  R  K  G  R  A  E  E  R  I  C  K  V  V  S  S  P  C  L  A  E  A  E  A  R  F  Q  I  S  V  E  G  V  T  D  V  K  D  *  M  C  D  Q  H  I  V  Y  Y  *  Y  Y  F  L  F  P  T  W  C  T  I  L  S  S  F  *  R  L  V  N  H  K  K  K  Y  A  I  *  </first_frame>
            <second_frame>  I  F  G  G  S  S  R  L  *  N  I  S  F  C  L  H  S  S  I  L  S  E  H  Q  E  N  *  Q  W  S  S  S  T  G  I  R  S  R  C  K  T  K  M  M  K  S  R  M  F  N  T  A  L  F  Q  L  N  N  F  R :   H  Q  G  L  Q  L  *  M  *  K  N  S  R  M  L  V  Y  V  Q  L  N  L  L  F  M  L  Q  E  R  N  F  C  R  *  K  E  L  V  K  L  K  L  T  R  L  L  R  Q  :  L  Q  N  *  C  L  W  D  S  L  V  P  A  N  S  M  H  R  G  L  K  S  Y  R  *  L  L  D  R  K  N  L  T  R  Y  *  K  :  E  E  S  K  L  D  L  L  L  K  F  T  E  S  S  D  V  E  R  L  S  C  V  T  H  Y  A  *  L  V  N :   F  H  *  I  R  E  V  V  K  G  K  Q  C  T  L  M  L  R  V  L  S  D  H  K  D  F  Y  K  L  Q  T   : G  M  D  *  M  V  L  M  S  W  R  M  *  P  M  L  E  L  I  I  P  I  I  N  Q  D  F  C  L  R  Q  P  Q  *  W  W  R  P   : G  L  L  S  *  L  W  T  V  L  L  P  F  I  E  L  T  S  L  G  E  E  S  C  L  P  G  R  C  I  L  Q  S  F  *  E  A  F  R  S  *  Q  M  S :   L  V  L  L  L  L  L  R  T  K  L  L  L  K  W  M  V  L  L  Y  L  L  G  L  K  *  N  P  L  V  A  T  S  W  H  M  L  L  R  R   : D  *  L  *  G  R  V  G  P  R  S  G  F  V  K  *  S  V  R  H  A  *  L  K  Q  K  Q  D  F  K  F  L  L  K  E  S  L  M  *  R  T  K  C  V  I  S  T  L  F  T  T  S  T  I  F  C  F  L  L  G  V  R  F  C  H  R  F  E  G  *  L  T  I  K  R  S  M  L  Y  E </second_frame>
            <third_frame>   F  L  A  A  P  H  A  F  E  I  F  P  F  A  S  I  L  P  F  S  V  S  I  K  K  I  S  N  G  A  A  A  Q  E  S  E  V  D  A  R  P  K  *  *  N  R  G  C  S  T  R  P  F  S  S  *  T  T  S   : G  I  R  D  C  S  S  R  C  K  K  T  Q  G  C  W  S  M  Y  S  *  I  C  C  L  C  S  K  K  G  T  S  A  D  K  R  N  *  *  S  *  S  *  Q  D  Y  *  G  S :   F  K  I  S  A  F  G  I  H  *  C  Q  P  T  P  C  T  E  A  *  N  H  T  D  N  F  W  I  E  R  T  *  Q  D  I  R  R :   R  N  R  N  W  I  Y  Y  *  N  L  R  R  V  P  M  W  K  D  S  A  V  S  H  T  M  R  D  L  S   : T  S  I  R  S  G  R  W  *  R  E  S  N  V  H  *  C  *  G  Y  F  Q  T  T  K  T  F  T  N  C  R  Q  :  V  W  I  E  W  S  *  C  P  G  E  C  S  L  C  S  S  L  *  Y  R  S  S  I  K  T  F  A  *  G  S  L  N  D  G  G  D  Q  :  V  C  S  H  D  C  G  Q  C  Y  C  P  L  *  N  *  L  L  W  E  R  R  V  V  C  Q  A  D  A  S  C  K  V  S  E  K  P  S  E  V  S  R  *   : V  W  C  C  C  C  Y  Y  E  P  S  C  C  S  S  G  W  F  C  C  I  C  W  A  S  N  K  T  H  W  W  Q  H  H  G  T  C  F  Y  D  E  :  T  S  S  E  E  G  *  G  R  G  A  D  L  *  S  S  Q  F  A  M  L  S  *  S  R  S  K  I  S  N  F  C  *  R  S  H  *  C  K  G  L  N  V  *  S  A  H  C  L  L  L  V  L  F  F  V  S  Y  L  V  Y  D  F  V  I  V  L  K  V  S  *  P  *  K  E  V  C  Y  M   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLe0008H22.2" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90081" stop="89968"/>
                    <exon start="88688" stop="88544"/>
                    <exon start="88413" stop="88303"/>
                    <exon start="88218" stop="88127"/>
                    <exon start="88035" stop="87941"/>
                    <exon start="87856" stop="87743"/>
                    <exon start="87320" stop="87191"/>
                    <exon start="87039" stop="86918"/>
                    <exon start="86836" stop="86713"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1044</number_coding_nucleotides>
                  <number_encoded_amino_acids>348</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ASRKLAMEQQHRNQKSMQDQNDEIEDVQHGPFPVEQLQASGIAALDVKKLKDAGLCTVESVVYAPRKELLQIKGISEAKVDKIIEAASKLVPLGFTSASQLHAQRLEIIQITSGSKELDKILEGGIETGSITEIYGEFRCGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRYGLNGPDVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAVFAGPQIKPIGGNIMAHASTTRLALRKGRAEERICKVVSSPCLAEAEARFQISVEGVTDVKD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="100560" PGL_stop="101237"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="100560" e_stop="101085"/>
            <exon e_start="101175" e_stop="101237"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.992" e_score="0.949"/>
          <exon-only e_score="0.905"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.949">
            <gDNA_exon_boundary e_start="100560" e_stop="101085" e_length="526"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.992">
            <gDNA_intron_boundary i_start="101086" i_stop="101174" i_length="89"/>
          </intron>
          <exon e_serial="2" e_score="0.905">
            <gDNA_exon_boundary e_start="101175" e_stop="101237" e_length="63"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100560" stop="101085"/>
              <exon start="101175" stop="101237"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261046" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCCAATGGCAATGATGGTATTCAATACAAATGTAACAAGATCAATGCAGTGCAACATTGAATGGAATGGTGATGTTGGATTTGAAGTGTTAGAAGTGGTATACAAGCATACTGTGAACTTGGGTCAACAAAAATGTAATTGCAGATCATGGGAATTAAAAGGTATCCCATGTGCACATGGTATAGCAACAATCAACCACTTGAACATAGATGCATCACAAGCAATATCTAGTTGGTATAGAAAAGACACATATATGAAGACATATTCTTATTTCACTCAACCAGTCCCAAACATGGAAATGTGGCTTGAAAGTAGAAACCTAATGGTTGAACCACCTGAGGCAAGATAAATGCCTGGTAGGCCACCAAAGAACAGAAGAAGAGAAATTGGTGAAGTGAGAAAAGTTGGAAAGTTGCCAAGAATGGGGACAGTAATGACATGTTCACTTTGTAAAGGACCAAATCATAACAAGAGAAATTGTCCAAAAAATCCTAAACCTAAGTCTACACCAACACCCACTCAAGAG : TCCACCATTGGAAAAAAGAGGGGTAGAGGTCATTATGAAAGAACAAGCACCAGTAAGACTGGT</gDNA_template>
            <first_frame> S  N  G  N  D  G  I  Q  Y  K  C  N  K  I  N  A  V  Q  H  *  M  E  W  *  C  W  I  *  S  V  R  S  G  I  Q  A  Y  C  E  L  G  S  T  K  M  *  L  Q  I  M  G  I  K  R  Y  P  M  C  T  W  Y  S  N  N  Q  P  L  E  H  R  C  I  T  S  N  I  *  L  V  *  K  R  H  I  Y  E  D  I  F  L  F  H  S  T  S  P  K  H  G  N  V  A  *  K  *  K  P  N  G  *  T  T  *  G  K  I  N  A  W  *  A  T  K  E  Q  K  K  R  N  W  *  S  E  K  S  W  K  V  A  K  N  G  D  S  N  D  M  F  T  L  *  R  T  K  S  *  Q  E  K  L  S  K  K  S  *  T  *  V  Y  T  N  T  H  S  R   : V  H  H  W  K  K  E  G  *  R  S  L  *  K  N  K  H  Q  *  D  W  </first_frame>
            <second_frame>  P  M  A  M  M  V  F  N  T  N  V  T  R  S  M  Q  C  N  I  E  W  N  G  D  V  G  F  E  V  L  E  V  V  Y  K  H  T  V  N  L  G  Q  Q  K  C  N  C  R  S  W  E  L  K  G  I  P  C  A  H  G  I  A  T  I  N  H  L  N  I  D  A  S  Q  A  I  S  S  W  Y  R  K  D  T  Y  M  K  T  Y  S  Y  F  T  Q  P  V  P  N  M  E  M  W  L  E  S  R  N  L  M  V  E  P  P  E  A  R  *  M  P  G  R  P  P  K  N  R  R  R  E  I  G  E  V  R  K  V  G  K  L  P  R  M  G  T  V  M  T  C  S  L  C  K  G  P  N  H  N  K  R  N  C  P  K  N  P  K  P  K  S  T  P  T  P  T  Q  E  :  S  T  I  G  K  K  R  G  R  G  H  Y  E  R  T  S  T  S  K  T  G </second_frame>
            <third_frame>   Q  W  Q  *  W  Y  S  I  Q  M  *  Q  D  Q  C  S  A  T  L  N  G  M  V  M  L  D  L  K  C  *  K  W  Y  T  S  I  L  *  T  W  V  N  K  N  V  I  A  D  H  G  N  *  K  V  S  H  V  H  M  V  *  Q  Q  S  T  T  *  T  *  M  H  H  K  Q  Y  L  V  G  I  E  K  T  H  I  *  R  H  I  L  I  S  L  N  Q  S  Q  T  W  K  C  G  L  K  V  E  T  *  W  L  N  H  L  R  Q  D  K  C  L  V  G  H  Q  R  T  E  E  E  K  L  V  K  *  E  K  L  E  S  C  Q  E  W  G  Q  *  *  H  V  H  F  V  K  D  Q  I  I  T  R  E  I  V  Q  K  I  L  N  L  S  L  H  Q  H  P  L  K  S :   P  P  L  E  K  R  G  V  E  V  I  M  K  E  Q  A  P  V  R  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLe0008H22.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="100561" stop="100908"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>345</number_coding_nucleotides>
                  <number_encoded_amino_acids>115</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PMAMMVFNTNVTRSMQCNIEWNGDVGFEVLEVVYKHTVNLGQQKCNCRSWELKGIPCAHGIATINHLNIDASQAISSWYRKDTYMKTYSYFTQPVPNMEMWLESRNLMVEPPEAR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07SLe0008H22.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="100909" stop="101085"/>
                    <exon start="101175" stop="101237"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MPGRPPKNRRREIGEVRKVGKLPRMGTVMTCSLCKGPNHNKRNCPKNPKPKSTPTPTQESTIGKKRGRGHYERTSTSKTG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 188 chains have been computed
$ 
$ memory statistics:
$ 557776 bytes spliced alignments in total
$ 58 spliced alignments have been stored
$ 9616 bytes was the average size of a spliced alignment
$ 18704 bytes predicted gene locations in total
$ 9 predicted gene locations have been stored
$ 2078 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 222 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-06 23:35:14
-->
