<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2008-11-13 23:09:44"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E308055" ref_strand="+" ref_description="SGN-E308055 [cLEY-14-J11]">
      <seq>acggtggagaccgccttataaagctgaaagctcgattcatcggtcaccggaaactcaaccgacgaagacaactaggaggaggtggaggagccaaatttgctgaatttgatatatgattactacaagtaacatgggtgattcctccaaggacgatttccttcagctcatcaagcgattcggcgcttttttgaccgtgaagatttctaatatcttccacacactggattcaagatctgtgggggccatagcaggtcttgcagttgctatagtttttacctggagagtgtggagatcacctagtggaccacaaaggagaattcctaagcgacaaggtacgacgcctagtagttctggtgtaagcactcattcaagtgcaaatgtggaaacttcaggagttatctcttcttcggaggattcaaatgctcaaaatgttattgatgagttctttcagccagtaaagccaacacttgcacaggtagttaggcaaaggctgagtgaagggaggaaggtgacatgttngttgctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="4350" stop="946"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4050" g_stop="3829" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="223" r_length="223" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3828" i_stop="1630" i_length="2199">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1629" g_stop="1393" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="460" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="1392" i_stop="1310" i_length="83">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="1309" g_stop="1262" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="461" r_stop="508" r_length="48" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E308055" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>507</cumulative_length_of_scored_exons>
        <coverage percentage="0.964" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E308055" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4050" e_stop="3829"/>
          <exon e_start="1629" e_stop="1393"/>
          <exon e_start="1309" e_stop="1262"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGGTGGAGACCGCCGGA-AAAGCTGAAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGAATTTGATATATGATTACTACAAGTAACATGGGTGATTCCTCCAAGGACGATTTCCTTCAGCTCATCAAGCGATTCGGCGCTTTTTTGACCGTGAAGATTTCTAATATCTTCCACACACTGGTTATTTCTCTTTCTCTTTCCCTATCTCCAGTTTTAACATCTCTTAATTGTGAATTAAGCACTGAACAATTTTAATTGATAAATCATGTTTACTGGAAAAAAAATGAGTTGAAGTTTGAGTTGTAATAGGAGATTGAAATTCGTGCTGAGAATTCCTAAATTGGCTCACATGATTACAAGCAAGGGCTTTGCTACGCACAATTTCTTGTAAGGGGAACTATAAGTTGACGCTAGATGTTATAATTGAAATTACCTTTTGCTAATTATACTGGGATATACAACTTGTTACTAGATGCATACTGTACTTAGGCAGCTTTAATCATGTTAAAATAAGAATAAGATCTATTGATGTTGTTTTTCAATTTTAGGAGAAACATTTCCACTAGACAAAAAGTAAGGTTCGAATACTTGGAATTCAGTTACTTATCTTAATGTTCTATAAACTTGAAAATTCTATCTGGAATGTGCTAGCTAGGTCACTGAATATATTTTAGAAGTAGCATTTGTGACCGGTATCATGAATGTCTGGCTTATTATATGAGTTGAGAGACACTTGAATTGGGGAATGGAGATTATCAAGGGTTTAATTATGTAATGATGTAGAGATGATTCTGATCAAATATCTATAACAATCATAACTCAAATGTCATAATATTGATCTTAACAGTTATATAATTGCAATCAATCTCTTGTCTCTTCAAAATTATGGTGTTTGTGGATAAAGTTTTGTTGAAATCTTGGTTACACTTTGTCCTCAAGTTTCAGCCAAGTTGTTATTTCTGGTTGTAGTTCCAATAAAACTTCTCACAACTTTCTCATGTTGAAGATAAATTGCATTTCATTATTTGATAGGCATTTGATTTTCTTTAGTCTGTGCTTCTTCTCTGCCACTATTGGTCTCTCTATTGTCTTTCATCCTCCAGTTCTTGTTCTCTTGTTTGCTTTGTCCTCACATAATTGTTTCTTGGTCATCTTAACATGTTCACATGTTTAAGCGGTCCTTTCAAATTGCCAAATCTGTTCTCTTTTTTTCCTCACTACAGCCTACACGTAACCTCTCCTCTACTCTAATCCTGGTATGTTTATTAGGCTATCACAGTGACCCCTGTGCTGATTTGGAAGTGTAGACTGAGATTCTAGTAGCTAGTGTAAGCAGTTAAAGCTGCCGAGAAATGGTTGTAAGAGAAGCTGAGGGTGGAGGAGAAAAGAAGTGAGGGAAGAAGTTTGGAAACACAGGTTTCAAACCATGTGCCGGAATTTCTCAGTTGTAAAATTAGAAGGTGAGAAACACGGGCTTATCTCATAACATTGCTGGTTTGGAGTTGAGTCTCACAGGTTAAGAGATTGGGTGAAGTTACGATTTCCAACTATTTCTTGACTATGATATTGATACTTAATGTAGCTTTGTTTGTCATTAGCAAATTGCAATAGAATTTGTAGTTACCGTTATCTATTAATTACCATATCCTGAAGCCTGAAGGTCACCCACAGGATGATGTTTCTCAAGGAGAAATGTCTAGTTTGCTTGGTTACTTTGACTTTCCATTTTCAATTAAAGAAGTATACAACTTCAGTTCCATTGTTTGAGATTTGGTTTAGGCCAATTTGGATGGCTCCCTGTTTACCTTTCCTGATTTTTTTCTGGACCGTCCCAATGTCCCTTTTTTCTGGGTTGTGCTTTCCTGGCAAGTGCACTCTTTTGCAATTCTCAGATTAAACATCATCAGAAATGAATGAAAAATGATAGATATTGAAGGAAAAAAACTAAACAAGTCTACAATCAAATGGTATGAAGAGTTAACCTCTAATCAGATATTACATAACACTGTAATAACTACCTTGGTCTAGGATTGCTCGAAAGATATACTTCTAAAAGTGTGGCTCTGCAAATCATCCATGCATCTAGCAGCATTTGGGAGCAGTGCATGTAATATAGGATGCTATAAAGCAACATTTTTAAAGTGTGAGTGGTCAAATCATTCAAACCACTTGCAGAGTTGGGAAAAGCAGTGGGTGTTAACTTAGCAATTTGTGTTCTCCACTATCCAATAACTGTTTTGTCCGGAACCTTACAAATAAAGACCTTTTCTGATATAAGTTGTGGTATAATCTTCAATTTGCTTCATCCCAGGAGGATCTATCAAAATGTTCTGCCTTTTTTTATATAATATGATGGTAACAGCAATCCGCTGAATGCAGGATTCAAGATCTGTGGGGGCCATAGCAGGTCTTGCAGTTGCTATAGTTTTTACCTGGAGAGTGTGGAGATCACCTAGTGGACCACAAAGGAGAATTCCTAAGCGACAAGGTACGACGCCTAGTAGTTCTGGTGTAAGCACTCATTCAAGTGCAAATGTGGAAACTTCAGGAGTTATCTCTTCTTCGGAGGATTCAAATGCTCAAAATGTTATTGATGAGTTCTTTCAGCCAGTAAAGGTAGATAGCAATCCTTCTCCACTCTGAGCAGAATAAACGAAATGTTATTAGTGTATAATTAACATTTTCTTGTGATTTTGCAGCCAACACTTGCACAGGTAGTTAGGCAAAGGCTGAGTGAAGGGAGGAAG</genome_strand>
        <mrna_strand>ACGGTGGAGACCGCCTTATAAAGCTGAAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGAATTTGATATATGATTACTACAAGTAACATGGGTGATTCCTCCAAGGACGATTTCCTTCAGCTCATCAAGCGATTCGGCGCTTTTTTGACCGTGAAGATTTCTAATATCTTCCACACACTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCAAGATCTGTGGGGGCCATAGCAGGTCTTGCAGTTGCTATAGTTTTTACCTGGAGAGTGTGGAGATCACCTAGTGGACCACAAAGGAGAATTCCTAAGCGACAAGGTACGACGCCTAGTAGTTCTGGTGTAAGCACTCATTCAAGTGCAAATGTGGAAACTTCAGGAGTTATCTCTTCTTCGGAGGATTCAAATGCTCAAAATGTTATTGATGAGTTCTTTCAGCCAGTAAAG...................................................................................CCAACACTTGCACAGGTAGTTAGGCAAAGGCTGAGTGAAGGGAGGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E236549" ref_strand="+" ref_description="SGN-E236549 [cLED-13-C10]">
      <seq>cgccggaaaagctgaaagctcgattcatcggtcaccggaaactcaaccgacgaagacaactaggaggaggtggaggagccaaatttgctgaatttgatatatgattactacaagtaacatgggtgattcctccaaggacgatttccttcagctcatcaagcgattcggcgcttttttgaccgtgaagatttctaatatcttccacacactggattcaagatctgtgggggccatagcaggtcttgcagttgctatagtttttacctggagagtgtggagatcacctagtggaccacaaaggagaattcctaagcgacaaggtacgacgcctagtagttctggtgtaagcactcattcaagtgcaaatgtggaaacttcaggagttatctcttcttcggaggattcaaatgctcaaaatgttattgatgagttctttcagccagtaaagccaacacttgcacaggtagttaggcaaaggctgagtgaagggaggaaggtgacatgtaggttgcttggagtgatccttgaggaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="4339" stop="930"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4039" g_stop="3829" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="211" r_length="211" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3828" i_stop="1630" i_length="2199">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1629" g_stop="1393" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="212" r_stop="448" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="1392" i_stop="1310" i_length="83">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="1309" g_stop="1262" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="449" r_stop="496" r_length="48" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E236549" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>496</cumulative_length_of_scored_exons>
        <coverage percentage="0.929" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E236549" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4039" e_stop="3829"/>
          <exon e_start="1629" e_stop="1393"/>
          <exon e_start="1309" e_stop="1262"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCCGGAAAAGCTGAAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGAATTTGATATATGATTACTACAAGTAACATGGGTGATTCCTCCAAGGACGATTTCCTTCAGCTCATCAAGCGATTCGGCGCTTTTTTGACCGTGAAGATTTCTAATATCTTCCACACACTGGTTATTTCTCTTTCTCTTTCCCTATCTCCAGTTTTAACATCTCTTAATTGTGAATTAAGCACTGAACAATTTTAATTGATAAATCATGTTTACTGGAAAAAAAATGAGTTGAAGTTTGAGTTGTAATAGGAGATTGAAATTCGTGCTGAGAATTCCTAAATTGGCTCACATGATTACAAGCAAGGGCTTTGCTACGCACAATTTCTTGTAAGGGGAACTATAAGTTGACGCTAGATGTTATAATTGAAATTACCTTTTGCTAATTATACTGGGATATACAACTTGTTACTAGATGCATACTGTACTTAGGCAGCTTTAATCATGTTAAAATAAGAATAAGATCTATTGATGTTGTTTTTCAATTTTAGGAGAAACATTTCCACTAGACAAAAAGTAAGGTTCGAATACTTGGAATTCAGTTACTTATCTTAATGTTCTATAAACTTGAAAATTCTATCTGGAATGTGCTAGCTAGGTCACTGAATATATTTTAGAAGTAGCATTTGTGACCGGTATCATGAATGTCTGGCTTATTATATGAGTTGAGAGACACTTGAATTGGGGAATGGAGATTATCAAGGGTTTAATTATGTAATGATGTAGAGATGATTCTGATCAAATATCTATAACAATCATAACTCAAATGTCATAATATTGATCTTAACAGTTATATAATTGCAATCAATCTCTTGTCTCTTCAAAATTATGGTGTTTGTGGATAAAGTTTTGTTGAAATCTTGGTTACACTTTGTCCTCAAGTTTCAGCCAAGTTGTTATTTCTGGTTGTAGTTCCAATAAAACTTCTCACAACTTTCTCATGTTGAAGATAAATTGCATTTCATTATTTGATAGGCATTTGATTTTCTTTAGTCTGTGCTTCTTCTCTGCCACTATTGGTCTCTCTATTGTCTTTCATCCTCCAGTTCTTGTTCTCTTGTTTGCTTTGTCCTCACATAATTGTTTCTTGGTCATCTTAACATGTTCACATGTTTAAGCGGTCCTTTCAAATTGCCAAATCTGTTCTCTTTTTTTCCTCACTACAGCCTACACGTAACCTCTCCTCTACTCTAATCCTGGTATGTTTATTAGGCTATCACAGTGACCCCTGTGCTGATTTGGAAGTGTAGACTGAGATTCTAGTAGCTAGTGTAAGCAGTTAAAGCTGCCGAGAAATGGTTGTAAGAGAAGCTGAGGGTGGAGGAGAAAAGAAGTGAGGGAAGAAGTTTGGAAACACAGGTTTCAAACCATGTGCCGGAATTTCTCAGTTGTAAAATTAGAAGGTGAGAAACACGGGCTTATCTCATAACATTGCTGGTTTGGAGTTGAGTCTCACAGGTTAAGAGATTGGGTGAAGTTACGATTTCCAACTATTTCTTGACTATGATATTGATACTTAATGTAGCTTTGTTTGTCATTAGCAAATTGCAATAGAATTTGTAGTTACCGTTATCTATTAATTACCATATCCTGAAGCCTGAAGGTCACCCACAGGATGATGTTTCTCAAGGAGAAATGTCTAGTTTGCTTGGTTACTTTGACTTTCCATTTTCAATTAAAGAAGTATACAACTTCAGTTCCATTGTTTGAGATTTGGTTTAGGCCAATTTGGATGGCTCCCTGTTTACCTTTCCTGATTTTTTTCTGGACCGTCCCAATGTCCCTTTTTTCTGGGTTGTGCTTTCCTGGCAAGTGCACTCTTTTGCAATTCTCAGATTAAACATCATCAGAAATGAATGAAAAATGATAGATATTGAAGGAAAAAAACTAAACAAGTCTACAATCAAATGGTATGAAGAGTTAACCTCTAATCAGATATTACATAACACTGTAATAACTACCTTGGTCTAGGATTGCTCGAAAGATATACTTCTAAAAGTGTGGCTCTGCAAATCATCCATGCATCTAGCAGCATTTGGGAGCAGTGCATGTAATATAGGATGCTATAAAGCAACATTTTTAAAGTGTGAGTGGTCAAATCATTCAAACCACTTGCAGAGTTGGGAAAAGCAGTGGGTGTTAACTTAGCAATTTGTGTTCTCCACTATCCAATAACTGTTTTGTCCGGAACCTTACAAATAAAGACCTTTTCTGATATAAGTTGTGGTATAATCTTCAATTTGCTTCATCCCAGGAGGATCTATCAAAATGTTCTGCCTTTTTTTATATAATATGATGGTAACAGCAATCCGCTGAATGCAGGATTCAAGATCTGTGGGGGCCATAGCAGGTCTTGCAGTTGCTATAGTTTTTACCTGGAGAGTGTGGAGATCACCTAGTGGACCACAAAGGAGAATTCCTAAGCGACAAGGTACGACGCCTAGTAGTTCTGGTGTAAGCACTCATTCAAGTGCAAATGTGGAAACTTCAGGAGTTATCTCTTCTTCGGAGGATTCAAATGCTCAAAATGTTATTGATGAGTTCTTTCAGCCAGTAAAGGTAGATAGCAATCCTTCTCCACTCTGAGCAGAATAAACGAAATGTTATTAGTGTATAATTAACATTTTCTTGTGATTTTGCAGCCAACACTTGCACAGGTAGTTAGGCAAAGGCTGAGTGAAGGGAGGAAG</genome_strand>
        <mrna_strand>CGCCGGAAAAGCTGAAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGAATTTGATATATGATTACTACAAGTAACATGGGTGATTCCTCCAAGGACGATTTCCTTCAGCTCATCAAGCGATTCGGCGCTTTTTTGACCGTGAAGATTTCTAATATCTTCCACACACTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCAAGATCTGTGGGGGCCATAGCAGGTCTTGCAGTTGCTATAGTTTTTACCTGGAGAGTGTGGAGATCACCTAGTGGACCACAAAGGAGAATTCCTAAGCGACAAGGTACGACGCCTAGTAGTTCTGGTGTAAGCACTCATTCAAGTGCAAATGTGGAAACTTCAGGAGTTATCTCTTCTTCGGAGGATTCAAATGCTCAAAATGTTATTGATGAGTTCTTTCAGCCAGTAAAG...................................................................................CCAACACTTGCACAGGTAGTTAGGCAAAGGCTGAGTGAAGGGAGGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E241892" ref_strand="+" ref_description="SGN-E241892 [cLED-27-J17]">
      <seq>cgccggaaaagctgaaagctcgattcatcggtcaccggaaactcaaccgacgaagacaactaggaggaggtggaggagccaaatttgctgaatttgatatatgattactacaagtaacatgggtgattcctccaaggacgatttccttcagctcatcaagcgattcggcgcttttttgaccgtgaagatttctaatatcttccacacactggattcaagatctgtgggggccatagcaggtcttgcagttgctatagtttttacctggagagtgtggagatcacctagtggaccacaaaggagaattcctaagcgacaaggtacgacgcctagtagttctggtgtaagcactcattcaagtgcaaatgtggaaacttcaggagttatctcttcttcggaggattcaaatgctcaaaatgttattgatgagttctttcagccagtaaagccaacacttgcacaggtagttaggcaaaggctgagtgaagggaggaaggtgacatgtaagttgcttggagtgatccttgaggaaactagccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="4339" stop="954"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4039" g_stop="3829" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="211" r_length="211" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3828" i_stop="1630" i_length="2199">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1629" g_stop="1393" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="212" r_stop="448" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="1392" i_stop="1310" i_length="83">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="1309" g_stop="1262" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="449" r_stop="496" r_length="48" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E241892" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>496</cumulative_length_of_scored_exons>
        <coverage percentage="0.919" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E241892" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4039" e_stop="3829"/>
          <exon e_start="1629" e_stop="1393"/>
          <exon e_start="1309" e_stop="1262"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCCGGAAAAGCTGAAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGAATTTGATATATGATTACTACAAGTAACATGGGTGATTCCTCCAAGGACGATTTCCTTCAGCTCATCAAGCGATTCGGCGCTTTTTTGACCGTGAAGATTTCTAATATCTTCCACACACTGGTTATTTCTCTTTCTCTTTCCCTATCTCCAGTTTTAACATCTCTTAATTGTGAATTAAGCACTGAACAATTTTAATTGATAAATCATGTTTACTGGAAAAAAAATGAGTTGAAGTTTGAGTTGTAATAGGAGATTGAAATTCGTGCTGAGAATTCCTAAATTGGCTCACATGATTACAAGCAAGGGCTTTGCTACGCACAATTTCTTGTAAGGGGAACTATAAGTTGACGCTAGATGTTATAATTGAAATTACCTTTTGCTAATTATACTGGGATATACAACTTGTTACTAGATGCATACTGTACTTAGGCAGCTTTAATCATGTTAAAATAAGAATAAGATCTATTGATGTTGTTTTTCAATTTTAGGAGAAACATTTCCACTAGACAAAAAGTAAGGTTCGAATACTTGGAATTCAGTTACTTATCTTAATGTTCTATAAACTTGAAAATTCTATCTGGAATGTGCTAGCTAGGTCACTGAATATATTTTAGAAGTAGCATTTGTGACCGGTATCATGAATGTCTGGCTTATTATATGAGTTGAGAGACACTTGAATTGGGGAATGGAGATTATCAAGGGTTTAATTATGTAATGATGTAGAGATGATTCTGATCAAATATCTATAACAATCATAACTCAAATGTCATAATATTGATCTTAACAGTTATATAATTGCAATCAATCTCTTGTCTCTTCAAAATTATGGTGTTTGTGGATAAAGTTTTGTTGAAATCTTGGTTACACTTTGTCCTCAAGTTTCAGCCAAGTTGTTATTTCTGGTTGTAGTTCCAATAAAACTTCTCACAACTTTCTCATGTTGAAGATAAATTGCATTTCATTATTTGATAGGCATTTGATTTTCTTTAGTCTGTGCTTCTTCTCTGCCACTATTGGTCTCTCTATTGTCTTTCATCCTCCAGTTCTTGTTCTCTTGTTTGCTTTGTCCTCACATAATTGTTTCTTGGTCATCTTAACATGTTCACATGTTTAAGCGGTCCTTTCAAATTGCCAAATCTGTTCTCTTTTTTTCCTCACTACAGCCTACACGTAACCTCTCCTCTACTCTAATCCTGGTATGTTTATTAGGCTATCACAGTGACCCCTGTGCTGATTTGGAAGTGTAGACTGAGATTCTAGTAGCTAGTGTAAGCAGTTAAAGCTGCCGAGAAATGGTTGTAAGAGAAGCTGAGGGTGGAGGAGAAAAGAAGTGAGGGAAGAAGTTTGGAAACACAGGTTTCAAACCATGTGCCGGAATTTCTCAGTTGTAAAATTAGAAGGTGAGAAACACGGGCTTATCTCATAACATTGCTGGTTTGGAGTTGAGTCTCACAGGTTAAGAGATTGGGTGAAGTTACGATTTCCAACTATTTCTTGACTATGATATTGATACTTAATGTAGCTTTGTTTGTCATTAGCAAATTGCAATAGAATTTGTAGTTACCGTTATCTATTAATTACCATATCCTGAAGCCTGAAGGTCACCCACAGGATGATGTTTCTCAAGGAGAAATGTCTAGTTTGCTTGGTTACTTTGACTTTCCATTTTCAATTAAAGAAGTATACAACTTCAGTTCCATTGTTTGAGATTTGGTTTAGGCCAATTTGGATGGCTCCCTGTTTACCTTTCCTGATTTTTTTCTGGACCGTCCCAATGTCCCTTTTTTCTGGGTTGTGCTTTCCTGGCAAGTGCACTCTTTTGCAATTCTCAGATTAAACATCATCAGAAATGAATGAAAAATGATAGATATTGAAGGAAAAAAACTAAACAAGTCTACAATCAAATGGTATGAAGAGTTAACCTCTAATCAGATATTACATAACACTGTAATAACTACCTTGGTCTAGGATTGCTCGAAAGATATACTTCTAAAAGTGTGGCTCTGCAAATCATCCATGCATCTAGCAGCATTTGGGAGCAGTGCATGTAATATAGGATGCTATAAAGCAACATTTTTAAAGTGTGAGTGGTCAAATCATTCAAACCACTTGCAGAGTTGGGAAAAGCAGTGGGTGTTAACTTAGCAATTTGTGTTCTCCACTATCCAATAACTGTTTTGTCCGGAACCTTACAAATAAAGACCTTTTCTGATATAAGTTGTGGTATAATCTTCAATTTGCTTCATCCCAGGAGGATCTATCAAAATGTTCTGCCTTTTTTTATATAATATGATGGTAACAGCAATCCGCTGAATGCAGGATTCAAGATCTGTGGGGGCCATAGCAGGTCTTGCAGTTGCTATAGTTTTTACCTGGAGAGTGTGGAGATCACCTAGTGGACCACAAAGGAGAATTCCTAAGCGACAAGGTACGACGCCTAGTAGTTCTGGTGTAAGCACTCATTCAAGTGCAAATGTGGAAACTTCAGGAGTTATCTCTTCTTCGGAGGATTCAAATGCTCAAAATGTTATTGATGAGTTCTTTCAGCCAGTAAAGGTAGATAGCAATCCTTCTCCACTCTGAGCAGAATAAACGAAATGTTATTAGTGTATAATTAACATTTTCTTGTGATTTTGCAGCCAACACTTGCACAGGTAGTTAGGCAAAGGCTGAGTGAAGGGAGGAAG</genome_strand>
        <mrna_strand>CGCCGGAAAAGCTGAAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGAATTTGATATATGATTACTACAAGTAACATGGGTGATTCCTCCAAGGACGATTTCCTTCAGCTCATCAAGCGATTCGGCGCTTTTTTGACCGTGAAGATTTCTAATATCTTCCACACACTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCAAGATCTGTGGGGGCCATAGCAGGTCTTGCAGTTGCTATAGTTTTTACCTGGAGAGTGTGGAGATCACCTAGTGGACCACAAAGGAGAATTCCTAAGCGACAAGGTACGACGCCTAGTAGTTCTGGTGTAAGCACTCATTCAAGTGCAAATGTGGAAACTTCAGGAGTTATCTCTTCTTCGGAGGATTCAAATGCTCAAAATGTTATTGATGAGTTCTTTCAGCCAGTAAAG...................................................................................CCAACACTTGCACAGGTAGTTAGGCAAAGGCTGAGTGAAGGGAGGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E207008" ref_strand="+" ref_description="SGN-E207008 [cLEC-33-H14]">
      <seq>tcgattcatcggtcaccggaaactcaaccgacgaagacaactaggaggaggtggaggagccaaatttgctgaatttgatatatgattactacaagtaacatgggtgattcctccaaggacgatttccttcagctcatcaagcgattcggcgcttttttgaccgtgaagatttctaatatcttccacacactggattcaagatctgtgggggccatagcaggtcttgcagttgctatagtttttacctggagagtgtggagatcacctagtggaccacaaaggagaattcctaagcgacaaggtacgacgcctagtagttctggtgtaagcactcattcaagtgcaaatgtggaaacttcaggagttatctcttcttcggaggattcaaatgctcaaaatgttattgatgagttctttcagccagtaaagccaacacttgcacaggtagttaggcaaaagctgagtgaagggaggaaggtgacatgtacgttgcttggagtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="4320" stop="954"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4020" g_stop="3829" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="192" r_length="192" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3828" i_stop="1630" i_length="2199">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1629" g_stop="1393" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="193" r_stop="429" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="1392" i_stop="1310" i_length="83">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="1309" g_stop="1262" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="430" r_stop="477" r_length="48" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E207008" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>477</cumulative_length_of_scored_exons>
        <coverage percentage="0.952" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E207008" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4020" e_stop="3829"/>
          <exon e_start="1629" e_stop="1393"/>
          <exon e_start="1309" e_stop="1262"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGAATTTGATATATGATTACTACAAGTAACATGGGTGATTCCTCCAAGGACGATTTCCTTCAGCTCATCAAGCGATTCGGCGCTTTTTTGACCGTGAAGATTTCTAATATCTTCCACACACTGGTTATTTCTCTTTCTCTTTCCCTATCTCCAGTTTTAACATCTCTTAATTGTGAATTAAGCACTGAACAATTTTAATTGATAAATCATGTTTACTGGAAAAAAAATGAGTTGAAGTTTGAGTTGTAATAGGAGATTGAAATTCGTGCTGAGAATTCCTAAATTGGCTCACATGATTACAAGCAAGGGCTTTGCTACGCACAATTTCTTGTAAGGGGAACTATAAGTTGACGCTAGATGTTATAATTGAAATTACCTTTTGCTAATTATACTGGGATATACAACTTGTTACTAGATGCATACTGTACTTAGGCAGCTTTAATCATGTTAAAATAAGAATAAGATCTATTGATGTTGTTTTTCAATTTTAGGAGAAACATTTCCACTAGACAAAAAGTAAGGTTCGAATACTTGGAATTCAGTTACTTATCTTAATGTTCTATAAACTTGAAAATTCTATCTGGAATGTGCTAGCTAGGTCACTGAATATATTTTAGAAGTAGCATTTGTGACCGGTATCATGAATGTCTGGCTTATTATATGAGTTGAGAGACACTTGAATTGGGGAATGGAGATTATCAAGGGTTTAATTATGTAATGATGTAGAGATGATTCTGATCAAATATCTATAACAATCATAACTCAAATGTCATAATATTGATCTTAACAGTTATATAATTGCAATCAATCTCTTGTCTCTTCAAAATTATGGTGTTTGTGGATAAAGTTTTGTTGAAATCTTGGTTACACTTTGTCCTCAAGTTTCAGCCAAGTTGTTATTTCTGGTTGTAGTTCCAATAAAACTTCTCACAACTTTCTCATGTTGAAGATAAATTGCATTTCATTATTTGATAGGCATTTGATTTTCTTTAGTCTGTGCTTCTTCTCTGCCACTATTGGTCTCTCTATTGTCTTTCATCCTCCAGTTCTTGTTCTCTTGTTTGCTTTGTCCTCACATAATTGTTTCTTGGTCATCTTAACATGTTCACATGTTTAAGCGGTCCTTTCAAATTGCCAAATCTGTTCTCTTTTTTTCCTCACTACAGCCTACACGTAACCTCTCCTCTACTCTAATCCTGGTATGTTTATTAGGCTATCACAGTGACCCCTGTGCTGATTTGGAAGTGTAGACTGAGATTCTAGTAGCTAGTGTAAGCAGTTAAAGCTGCCGAGAAATGGTTGTAAGAGAAGCTGAGGGTGGAGGAGAAAAGAAGTGAGGGAAGAAGTTTGGAAACACAGGTTTCAAACCATGTGCCGGAATTTCTCAGTTGTAAAATTAGAAGGTGAGAAACACGGGCTTATCTCATAACATTGCTGGTTTGGAGTTGAGTCTCACAGGTTAAGAGATTGGGTGAAGTTACGATTTCCAACTATTTCTTGACTATGATATTGATACTTAATGTAGCTTTGTTTGTCATTAGCAAATTGCAATAGAATTTGTAGTTACCGTTATCTATTAATTACCATATCCTGAAGCCTGAAGGTCACCCACAGGATGATGTTTCTCAAGGAGAAATGTCTAGTTTGCTTGGTTACTTTGACTTTCCATTTTCAATTAAAGAAGTATACAACTTCAGTTCCATTGTTTGAGATTTGGTTTAGGCCAATTTGGATGGCTCCCTGTTTACCTTTCCTGATTTTTTTCTGGACCGTCCCAATGTCCCTTTTTTCTGGGTTGTGCTTTCCTGGCAAGTGCACTCTTTTGCAATTCTCAGATTAAACATCATCAGAAATGAATGAAAAATGATAGATATTGAAGGAAAAAAACTAAACAAGTCTACAATCAAATGGTATGAAGAGTTAACCTCTAATCAGATATTACATAACACTGTAATAACTACCTTGGTCTAGGATTGCTCGAAAGATATACTTCTAAAAGTGTGGCTCTGCAAATCATCCATGCATCTAGCAGCATTTGGGAGCAGTGCATGTAATATAGGATGCTATAAAGCAACATTTTTAAAGTGTGAGTGGTCAAATCATTCAAACCACTTGCAGAGTTGGGAAAAGCAGTGGGTGTTAACTTAGCAATTTGTGTTCTCCACTATCCAATAACTGTTTTGTCCGGAACCTTACAAATAAAGACCTTTTCTGATATAAGTTGTGGTATAATCTTCAATTTGCTTCATCCCAGGAGGATCTATCAAAATGTTCTGCCTTTTTTTATATAATATGATGGTAACAGCAATCCGCTGAATGCAGGATTCAAGATCTGTGGGGGCCATAGCAGGTCTTGCAGTTGCTATAGTTTTTACCTGGAGAGTGTGGAGATCACCTAGTGGACCACAAAGGAGAATTCCTAAGCGACAAGGTACGACGCCTAGTAGTTCTGGTGTAAGCACTCATTCAAGTGCAAATGTGGAAACTTCAGGAGTTATCTCTTCTTCGGAGGATTCAAATGCTCAAAATGTTATTGATGAGTTCTTTCAGCCAGTAAAGGTAGATAGCAATCCTTCTCCACTCTGAGCAGAATAAACGAAATGTTATTAGTGTATAATTAACATTTTCTTGTGATTTTGCAGCCAACACTTGCACAGGTAGTTAGGCAAAGGCTGAGTGAAGGGAGGAAG</genome_strand>
        <mrna_strand>TCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGAATTTGATATATGATTACTACAAGTAACATGGGTGATTCCTCCAAGGACGATTTCCTTCAGCTCATCAAGCGATTCGGCGCTTTTTTGACCGTGAAGATTTCTAATATCTTCCACACACTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCAAGATCTGTGGGGGCCATAGCAGGTCTTGCAGTTGCTATAGTTTTTACCTGGAGAGTGTGGAGATCACCTAGTGGACCACAAAGGAGAATTCCTAAGCGACAAGGTACGACGCCTAGTAGTTCTGGTGTAAGCACTCATTCAAGTGCAAATGTGGAAACTTCAGGAGTTATCTCTTCTTCGGAGGATTCAAATGCTCAAAATGTTATTGATGAGTTCTTTCAGCCAGTAAAG...................................................................................CCAACACTTGCACAGGTAGTTAGGCAAAAGCTGAGTGAAGGGAGGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E300696" ref_strand="+" ref_description="SGN-E300696 [cLEW-8-G1]">
      <seq>gaggtggaggagccaaatttgctgaatttgatatatgattactacaagtaacatgggtgattcctacaaggacgatttgcttcagctcatcaagcgattcggcgcttttttgaccgtgaagatttctaatatcttccacacactggattcaagatctgtgggggccatagcaggtcttgcagttgctatagtttttacctggagagtgtggagatcacctagtggaccacaaaggagaattcctaagcgacaaggtacgacgcctagtagttctggtgtgagcactcattcaagtgcaaatgtggaaacttgaggagttatctcttcttcggaggattcaaatgctcaaaatgtcattgatgagttctttcagccagtaaagccaacacttgcacaggtagttaggcaaaggctgagtgaagggaggaaggtgacatgtaggttgcttggagtgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="4273" stop="944"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3973" g_stop="3829" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="145" r_length="145" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3828" i_stop="1630" i_length="2199">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1629" g_stop="1393" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="146" r_stop="382" r_length="237" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="1392" i_stop="1310" i_length="83">
            <donor d_prob="0.982" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="1309" g_stop="1262" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="430" r_length="48" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E300696" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>430</cumulative_length_of_scored_exons>
        <coverage percentage="0.943" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E300696" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3973" e_stop="3829"/>
          <exon e_start="1629" e_stop="1393"/>
          <exon e_start="1309" e_stop="1262"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGTGGAGGAGCCAAATTTGCTGAATTTGATATATGATTACTACAAGTAACATGGGTGATTCCTCCAAGGACGATTTCCTTCAGCTCATCAAGCGATTCGGCGCTTTTTTGACCGTGAAGATTTCTAATATCTTCCACACACTGGTTATTTCTCTTTCTCTTTCCCTATCTCCAGTTTTAACATCTCTTAATTGTGAATTAAGCACTGAACAATTTTAATTGATAAATCATGTTTACTGGAAAAAAAATGAGTTGAAGTTTGAGTTGTAATAGGAGATTGAAATTCGTGCTGAGAATTCCTAAATTGGCTCACATGATTACAAGCAAGGGCTTTGCTACGCACAATTTCTTGTAAGGGGAACTATAAGTTGACGCTAGATGTTATAATTGAAATTACCTTTTGCTAATTATACTGGGATATACAACTTGTTACTAGATGCATACTGTACTTAGGCAGCTTTAATCATGTTAAAATAAGAATAAGATCTATTGATGTTGTTTTTCAATTTTAGGAGAAACATTTCCACTAGACAAAAAGTAAGGTTCGAATACTTGGAATTCAGTTACTTATCTTAATGTTCTATAAACTTGAAAATTCTATCTGGAATGTGCTAGCTAGGTCACTGAATATATTTTAGAAGTAGCATTTGTGACCGGTATCATGAATGTCTGGCTTATTATATGAGTTGAGAGACACTTGAATTGGGGAATGGAGATTATCAAGGGTTTAATTATGTAATGATGTAGAGATGATTCTGATCAAATATCTATAACAATCATAACTCAAATGTCATAATATTGATCTTAACAGTTATATAATTGCAATCAATCTCTTGTCTCTTCAAAATTATGGTGTTTGTGGATAAAGTTTTGTTGAAATCTTGGTTACACTTTGTCCTCAAGTTTCAGCCAAGTTGTTATTTCTGGTTGTAGTTCCAATAAAACTTCTCACAACTTTCTCATGTTGAAGATAAATTGCATTTCATTATTTGATAGGCATTTGATTTTCTTTAGTCTGTGCTTCTTCTCTGCCACTATTGGTCTCTCTATTGTCTTTCATCCTCCAGTTCTTGTTCTCTTGTTTGCTTTGTCCTCACATAATTGTTTCTTGGTCATCTTAACATGTTCACATGTTTAAGCGGTCCTTTCAAATTGCCAAATCTGTTCTCTTTTTTTCCTCACTACAGCCTACACGTAACCTCTCCTCTACTCTAATCCTGGTATGTTTATTAGGCTATCACAGTGACCCCTGTGCTGATTTGGAAGTGTAGACTGAGATTCTAGTAGCTAGTGTAAGCAGTTAAAGCTGCCGAGAAATGGTTGTAAGAGAAGCTGAGGGTGGAGGAGAAAAGAAGTGAGGGAAGAAGTTTGGAAACACAGGTTTCAAACCATGTGCCGGAATTTCTCAGTTGTAAAATTAGAAGGTGAGAAACACGGGCTTATCTCATAACATTGCTGGTTTGGAGTTGAGTCTCACAGGTTAAGAGATTGGGTGAAGTTACGATTTCCAACTATTTCTTGACTATGATATTGATACTTAATGTAGCTTTGTTTGTCATTAGCAAATTGCAATAGAATTTGTAGTTACCGTTATCTATTAATTACCATATCCTGAAGCCTGAAGGTCACCCACAGGATGATGTTTCTCAAGGAGAAATGTCTAGTTTGCTTGGTTACTTTGACTTTCCATTTTCAATTAAAGAAGTATACAACTTCAGTTCCATTGTTTGAGATTTGGTTTAGGCCAATTTGGATGGCTCCCTGTTTACCTTTCCTGATTTTTTTCTGGACCGTCCCAATGTCCCTTTTTTCTGGGTTGTGCTTTCCTGGCAAGTGCACTCTTTTGCAATTCTCAGATTAAACATCATCAGAAATGAATGAAAAATGATAGATATTGAAGGAAAAAAACTAAACAAGTCTACAATCAAATGGTATGAAGAGTTAACCTCTAATCAGATATTACATAACACTGTAATAACTACCTTGGTCTAGGATTGCTCGAAAGATATACTTCTAAAAGTGTGGCTCTGCAAATCATCCATGCATCTAGCAGCATTTGGGAGCAGTGCATGTAATATAGGATGCTATAAAGCAACATTTTTAAAGTGTGAGTGGTCAAATCATTCAAACCACTTGCAGAGTTGGGAAAAGCAGTGGGTGTTAACTTAGCAATTTGTGTTCTCCACTATCCAATAACTGTTTTGTCCGGAACCTTACAAATAAAGACCTTTTCTGATATAAGTTGTGGTATAATCTTCAATTTGCTTCATCCCAGGAGGATCTATCAAAATGTTCTGCCTTTTTTTATATAATATGATGGTAACAGCAATCCGCTGAATGCAGGATTCAAGATCTGTGGGGGCCATAGCAGGTCTTGCAGTTGCTATAGTTTTTACCTGGAGAGTGTGGAGATCACCTAGTGGACCACAAAGGAGAATTCCTAAGCGACAAGGTACGACGCCTAGTAGTTCTGGTGTAAGCACTCATTCAAGTGCAAATGTGGAAACTTCAGGAGTTATCTCTTCTTCGGAGGATTCAAATGCTCAAAATGTTATTGATGAGTTCTTTCAGCCAGTAAAGGTAGATAGCAATCCTTCTCCACTCTGAGCAGAATAAACGAAATGTTATTAGTGTATAATTAACATTTTCTTGTGATTTTGCAGCCAACACTTGCACAGGTAGTTAGGCAAAGGCTGAGTGAAGGGAGGAAG</genome_strand>
        <mrna_strand>GAGGTGGAGGAGCCAAATTTGCTGAATTTGATATATGATTACTACAAGTAACATGGGTGATTCCTACAAGGACGATTTGCTTCAGCTCATCAAGCGATTCGGCGCTTTTTTGACCGTGAAGATTTCTAATATCTTCCACACACTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCAAGATCTGTGGGGGCCATAGCAGGTCTTGCAGTTGCTATAGTTTTTACCTGGAGAGTGTGGAGATCACCTAGTGGACCACAAAGGAGAATTCCTAAGCGACAAGGTACGACGCCTAGTAGTTCTGGTGTGAGCACTCATTCAAGTGCAAATGTGGAAACTTGAGGAGTTATCTCTTCTTCGGAGGATTCAAATGCTCAAAATGTCATTGATGAGTTCTTTCAGCCAGTAAAG...................................................................................CCAACACTTGCACAGGTAGTTAGGCAAAGGCTGAGTGAAGGGAGGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E240702" ref_strand="+" ref_description="SGN-E240702 [cLED-21-H24]">
      <seq>cgccggaaaagctttaagctcgattcatcggtcaccggaaactcaaccgacgaagacaactaggaggaggtggaggagccaaatttgctgaatttgatatatgattactacaagtaacatgggtgattcctccaaggacgatttccttcagctcatcaagcgattcggcgcttttttgaccgtgaagatttctaatatcttccacacactggattcaagatctgtgggggccatagcaggtcttgcagttgctatagtttttacctggagagtgtggagatcacctagtggaccacaaaggagaattcctaagcgacaaggtacgacgcctagtagttctggtgtaagcactcattcaagtgcaaatgtggaaacttcaggagttatctcttcttcggaggattcaaatgctcaaaatgttattgatgagttctttcagccagtaaagccaacacttgcacaggta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="4339" stop="992"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4039" g_stop="3829" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="211" r_length="211" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3828" i_stop="1630" i_length="2199">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1629" g_stop="1393" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="212" r_stop="448" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="1392" i_stop="1310" i_length="83">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="1309" g_stop="1292" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="449" r_stop="466" r_length="18" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E240702" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>466</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E240702" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4039" e_stop="3829"/>
          <exon e_start="1629" e_stop="1393"/>
          <exon e_start="1309" e_stop="1292"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCCGGAAAAGCTGAAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGAATTTGATATATGATTACTACAAGTAACATGGGTGATTCCTCCAAGGACGATTTCCTTCAGCTCATCAAGCGATTCGGCGCTTTTTTGACCGTGAAGATTTCTAATATCTTCCACACACTGGTTATTTCTCTTTCTCTTTCCCTATCTCCAGTTTTAACATCTCTTAATTGTGAATTAAGCACTGAACAATTTTAATTGATAAATCATGTTTACTGGAAAAAAAATGAGTTGAAGTTTGAGTTGTAATAGGAGATTGAAATTCGTGCTGAGAATTCCTAAATTGGCTCACATGATTACAAGCAAGGGCTTTGCTACGCACAATTTCTTGTAAGGGGAACTATAAGTTGACGCTAGATGTTATAATTGAAATTACCTTTTGCTAATTATACTGGGATATACAACTTGTTACTAGATGCATACTGTACTTAGGCAGCTTTAATCATGTTAAAATAAGAATAAGATCTATTGATGTTGTTTTTCAATTTTAGGAGAAACATTTCCACTAGACAAAAAGTAAGGTTCGAATACTTGGAATTCAGTTACTTATCTTAATGTTCTATAAACTTGAAAATTCTATCTGGAATGTGCTAGCTAGGTCACTGAATATATTTTAGAAGTAGCATTTGTGACCGGTATCATGAATGTCTGGCTTATTATATGAGTTGAGAGACACTTGAATTGGGGAATGGAGATTATCAAGGGTTTAATTATGTAATGATGTAGAGATGATTCTGATCAAATATCTATAACAATCATAACTCAAATGTCATAATATTGATCTTAACAGTTATATAATTGCAATCAATCTCTTGTCTCTTCAAAATTATGGTGTTTGTGGATAAAGTTTTGTTGAAATCTTGGTTACACTTTGTCCTCAAGTTTCAGCCAAGTTGTTATTTCTGGTTGTAGTTCCAATAAAACTTCTCACAACTTTCTCATGTTGAAGATAAATTGCATTTCATTATTTGATAGGCATTTGATTTTCTTTAGTCTGTGCTTCTTCTCTGCCACTATTGGTCTCTCTATTGTCTTTCATCCTCCAGTTCTTGTTCTCTTGTTTGCTTTGTCCTCACATAATTGTTTCTTGGTCATCTTAACATGTTCACATGTTTAAGCGGTCCTTTCAAATTGCCAAATCTGTTCTCTTTTTTTCCTCACTACAGCCTACACGTAACCTCTCCTCTACTCTAATCCTGGTATGTTTATTAGGCTATCACAGTGACCCCTGTGCTGATTTGGAAGTGTAGACTGAGATTCTAGTAGCTAGTGTAAGCAGTTAAAGCTGCCGAGAAATGGTTGTAAGAGAAGCTGAGGGTGGAGGAGAAAAGAAGTGAGGGAAGAAGTTTGGAAACACAGGTTTCAAACCATGTGCCGGAATTTCTCAGTTGTAAAATTAGAAGGTGAGAAACACGGGCTTATCTCATAACATTGCTGGTTTGGAGTTGAGTCTCACAGGTTAAGAGATTGGGTGAAGTTACGATTTCCAACTATTTCTTGACTATGATATTGATACTTAATGTAGCTTTGTTTGTCATTAGCAAATTGCAATAGAATTTGTAGTTACCGTTATCTATTAATTACCATATCCTGAAGCCTGAAGGTCACCCACAGGATGATGTTTCTCAAGGAGAAATGTCTAGTTTGCTTGGTTACTTTGACTTTCCATTTTCAATTAAAGAAGTATACAACTTCAGTTCCATTGTTTGAGATTTGGTTTAGGCCAATTTGGATGGCTCCCTGTTTACCTTTCCTGATTTTTTTCTGGACCGTCCCAATGTCCCTTTTTTCTGGGTTGTGCTTTCCTGGCAAGTGCACTCTTTTGCAATTCTCAGATTAAACATCATCAGAAATGAATGAAAAATGATAGATATTGAAGGAAAAAAACTAAACAAGTCTACAATCAAATGGTATGAAGAGTTAACCTCTAATCAGATATTACATAACACTGTAATAACTACCTTGGTCTAGGATTGCTCGAAAGATATACTTCTAAAAGTGTGGCTCTGCAAATCATCCATGCATCTAGCAGCATTTGGGAGCAGTGCATGTAATATAGGATGCTATAAAGCAACATTTTTAAAGTGTGAGTGGTCAAATCATTCAAACCACTTGCAGAGTTGGGAAAAGCAGTGGGTGTTAACTTAGCAATTTGTGTTCTCCACTATCCAATAACTGTTTTGTCCGGAACCTTACAAATAAAGACCTTTTCTGATATAAGTTGTGGTATAATCTTCAATTTGCTTCATCCCAGGAGGATCTATCAAAATGTTCTGCCTTTTTTTATATAATATGATGGTAACAGCAATCCGCTGAATGCAGGATTCAAGATCTGTGGGGGCCATAGCAGGTCTTGCAGTTGCTATAGTTTTTACCTGGAGAGTGTGGAGATCACCTAGTGGACCACAAAGGAGAATTCCTAAGCGACAAGGTACGACGCCTAGTAGTTCTGGTGTAAGCACTCATTCAAGTGCAAATGTGGAAACTTCAGGAGTTATCTCTTCTTCGGAGGATTCAAATGCTCAAAATGTTATTGATGAGTTCTTTCAGCCAGTAAAGGTAGATAGCAATCCTTCTCCACTCTGAGCAGAATAAACGAAATGTTATTAGTGTATAATTAACATTTTCTTGTGATTTTGCAGCCAACACTTGCACAGGTA</genome_strand>
        <mrna_strand>CGCCGGAAAAGCTTTAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGAATTTGATATATGATTACTACAAGTAACATGGGTGATTCCTCCAAGGACGATTTCCTTCAGCTCATCAAGCGATTCGGCGCTTTTTTGACCGTGAAGATTTCTAATATCTTCCACACACTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCAAGATCTGTGGGGGCCATAGCAGGTCTTGCAGTTGCTATAGTTTTTACCTGGAGAGTGTGGAGATCACCTAGTGGACCACAAAGGAGAATTCCTAAGCGACAAGGTACGACGCCTAGTAGTTCTGGTGTAAGCACTCATTCAAGTGCAAATGTGGAAACTTCAGGAGTTATCTCTTCTTCGGAGGATTCAAATGCTCAAAATGTTATTGATGAGTTCTTTCAGCCAGTAAAG...................................................................................CCAACACTTGCACAGGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E236130" ref_strand="+" ref_description="SGN-E236130 [cLED-16-O18]">
      <seq>cgccggaaaagctgaaagctcgattcatcggtcaccggaaactcaaccgacgaagacaactaggaggaggtggaggagccaaatttgctgaatttgatatatgattactacaagtaacatgggtgattcctccaaggacgatttccttcagctcatcaagcgattcggcgcttttttgaccgtgaagatttctaatatcttccacacactggattcaagatctgtgggggccatagcaggtcttgcagttgctatagtttttacctggagagtgtggagatcacctagtggaccacaaaggagaattcctaagcgacaaggtacgacgcctagtagttctggtgtaagcactcattcaagtgcaaatgtggaaacttcaggagttatctcttcttcggaggattcaaatgctcaaaatgttattgatgagttctttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="4339" stop="1103"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4039" g_stop="3829" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="211" r_length="211" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3828" i_stop="1630" i_length="2199">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1629" g_stop="1403" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="212" r_stop="438" r_length="227" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E236130" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>438</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E236130" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4039" e_stop="3829"/>
          <exon e_start="1629" e_stop="1403"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCCGGAAAAGCTGAAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGAATTTGATATATGATTACTACAAGTAACATGGGTGATTCCTCCAAGGACGATTTCCTTCAGCTCATCAAGCGATTCGGCGCTTTTTTGACCGTGAAGATTTCTAATATCTTCCACACACTGGTTATTTCTCTTTCTCTTTCCCTATCTCCAGTTTTAACATCTCTTAATTGTGAATTAAGCACTGAACAATTTTAATTGATAAATCATGTTTACTGGAAAAAAAATGAGTTGAAGTTTGAGTTGTAATAGGAGATTGAAATTCGTGCTGAGAATTCCTAAATTGGCTCACATGATTACAAGCAAGGGCTTTGCTACGCACAATTTCTTGTAAGGGGAACTATAAGTTGACGCTAGATGTTATAATTGAAATTACCTTTTGCTAATTATACTGGGATATACAACTTGTTACTAGATGCATACTGTACTTAGGCAGCTTTAATCATGTTAAAATAAGAATAAGATCTATTGATGTTGTTTTTCAATTTTAGGAGAAACATTTCCACTAGACAAAAAGTAAGGTTCGAATACTTGGAATTCAGTTACTTATCTTAATGTTCTATAAACTTGAAAATTCTATCTGGAATGTGCTAGCTAGGTCACTGAATATATTTTAGAAGTAGCATTTGTGACCGGTATCATGAATGTCTGGCTTATTATATGAGTTGAGAGACACTTGAATTGGGGAATGGAGATTATCAAGGGTTTAATTATGTAATGATGTAGAGATGATTCTGATCAAATATCTATAACAATCATAACTCAAATGTCATAATATTGATCTTAACAGTTATATAATTGCAATCAATCTCTTGTCTCTTCAAAATTATGGTGTTTGTGGATAAAGTTTTGTTGAAATCTTGGTTACACTTTGTCCTCAAGTTTCAGCCAAGTTGTTATTTCTGGTTGTAGTTCCAATAAAACTTCTCACAACTTTCTCATGTTGAAGATAAATTGCATTTCATTATTTGATAGGCATTTGATTTTCTTTAGTCTGTGCTTCTTCTCTGCCACTATTGGTCTCTCTATTGTCTTTCATCCTCCAGTTCTTGTTCTCTTGTTTGCTTTGTCCTCACATAATTGTTTCTTGGTCATCTTAACATGTTCACATGTTTAAGCGGTCCTTTCAAATTGCCAAATCTGTTCTCTTTTTTTCCTCACTACAGCCTACACGTAACCTCTCCTCTACTCTAATCCTGGTATGTTTATTAGGCTATCACAGTGACCCCTGTGCTGATTTGGAAGTGTAGACTGAGATTCTAGTAGCTAGTGTAAGCAGTTAAAGCTGCCGAGAAATGGTTGTAAGAGAAGCTGAGGGTGGAGGAGAAAAGAAGTGAGGGAAGAAGTTTGGAAACACAGGTTTCAAACCATGTGCCGGAATTTCTCAGTTGTAAAATTAGAAGGTGAGAAACACGGGCTTATCTCATAACATTGCTGGTTTGGAGTTGAGTCTCACAGGTTAAGAGATTGGGTGAAGTTACGATTTCCAACTATTTCTTGACTATGATATTGATACTTAATGTAGCTTTGTTTGTCATTAGCAAATTGCAATAGAATTTGTAGTTACCGTTATCTATTAATTACCATATCCTGAAGCCTGAAGGTCACCCACAGGATGATGTTTCTCAAGGAGAAATGTCTAGTTTGCTTGGTTACTTTGACTTTCCATTTTCAATTAAAGAAGTATACAACTTCAGTTCCATTGTTTGAGATTTGGTTTAGGCCAATTTGGATGGCTCCCTGTTTACCTTTCCTGATTTTTTTCTGGACCGTCCCAATGTCCCTTTTTTCTGGGTTGTGCTTTCCTGGCAAGTGCACTCTTTTGCAATTCTCAGATTAAACATCATCAGAAATGAATGAAAAATGATAGATATTGAAGGAAAAAAACTAAACAAGTCTACAATCAAATGGTATGAAGAGTTAACCTCTAATCAGATATTACATAACACTGTAATAACTACCTTGGTCTAGGATTGCTCGAAAGATATACTTCTAAAAGTGTGGCTCTGCAAATCATCCATGCATCTAGCAGCATTTGGGAGCAGTGCATGTAATATAGGATGCTATAAAGCAACATTTTTAAAGTGTGAGTGGTCAAATCATTCAAACCACTTGCAGAGTTGGGAAAAGCAGTGGGTGTTAACTTAGCAATTTGTGTTCTCCACTATCCAATAACTGTTTTGTCCGGAACCTTACAAATAAAGACCTTTTCTGATATAAGTTGTGGTATAATCTTCAATTTGCTTCATCCCAGGAGGATCTATCAAAATGTTCTGCCTTTTTTTATATAATATGATGGTAACAGCAATCCGCTGAATGCAGGATTCAAGATCTGTGGGGGCCATAGCAGGTCTTGCAGTTGCTATAGTTTTTACCTGGAGAGTGTGGAGATCACCTAGTGGACCACAAAGGAGAATTCCTAAGCGACAAGGTACGACGCCTAGTAGTTCTGGTGTAAGCACTCATTCAAGTGCAAATGTGGAAACTTCAGGAGTTATCTCTTCTTCGGAGGATTCAAATGCTCAAAATGTTATTGATGAGTTCTTTCA</genome_strand>
        <mrna_strand>CGCCGGAAAAGCTGAAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGAATTTGATATATGATTACTACAAGTAACATGGGTGATTCCTCCAAGGACGATTTCCTTCAGCTCATCAAGCGATTCGGCGCTTTTTTGACCGTGAAGATTTCTAATATCTTCCACACACTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCAAGATCTGTGGGGGCCATAGCAGGTCTTGCAGTTGCTATAGTTTTTACCTGGAGAGTGTGGAGATCACCTAGTGGACCACAAAGGAGAATTCCTAAGCGACAAGGTACGACGCCTAGTAGTTCTGGTGTAAGCACTCATTCAAGTGCAAATGTGGAAACTTCAGGAGTTATCTCTTCTTCGGAGGATTCAAATGCTCAAAATGTTATTGATGAGTTCTTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E339526" ref_strand="+" ref_description="SGN-E339526 [cTOE-16-A4]">
      <seq>aaaagctgaaagctcgattcatcggtcaccggaaactcaaccgacgaagacaactaggaggaggtggaggagccaaatttgctgaatttgatatatgattactacaagtaacatgggtgattcctccaaggacgatttccttcagctcatcaagcgattcggcgcttttttgaccgtgaagatttctaatatcttccacacactggattcaagatctgtgggggccatagcaggtcttgcagttgctatagtttttacctggagagtgtggagatcacctagtggaccacaaaggagaattcctaagcgacaaggtacgacgcctagtagttctggtgtaagcactcattcaagtgcaaatgtggaaacttcaggagttatctcttcttcggaggattcaaatgctcaaaatgttattgatgagttctttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="4333" stop="1104"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4033" g_stop="3829" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="205" r_length="205" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3828" i_stop="1630" i_length="2199">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1629" g_stop="1404" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="431" r_length="226" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E339526" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>431</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E339526" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4033" e_stop="3829"/>
          <exon e_start="1629" e_stop="1404"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGCTGAAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGAATTTGATATATGATTACTACAAGTAACATGGGTGATTCCTCCAAGGACGATTTCCTTCAGCTCATCAAGCGATTCGGCGCTTTTTTGACCGTGAAGATTTCTAATATCTTCCACACACTGGTTATTTCTCTTTCTCTTTCCCTATCTCCAGTTTTAACATCTCTTAATTGTGAATTAAGCACTGAACAATTTTAATTGATAAATCATGTTTACTGGAAAAAAAATGAGTTGAAGTTTGAGTTGTAATAGGAGATTGAAATTCGTGCTGAGAATTCCTAAATTGGCTCACATGATTACAAGCAAGGGCTTTGCTACGCACAATTTCTTGTAAGGGGAACTATAAGTTGACGCTAGATGTTATAATTGAAATTACCTTTTGCTAATTATACTGGGATATACAACTTGTTACTAGATGCATACTGTACTTAGGCAGCTTTAATCATGTTAAAATAAGAATAAGATCTATTGATGTTGTTTTTCAATTTTAGGAGAAACATTTCCACTAGACAAAAAGTAAGGTTCGAATACTTGGAATTCAGTTACTTATCTTAATGTTCTATAAACTTGAAAATTCTATCTGGAATGTGCTAGCTAGGTCACTGAATATATTTTAGAAGTAGCATTTGTGACCGGTATCATGAATGTCTGGCTTATTATATGAGTTGAGAGACACTTGAATTGGGGAATGGAGATTATCAAGGGTTTAATTATGTAATGATGTAGAGATGATTCTGATCAAATATCTATAACAATCATAACTCAAATGTCATAATATTGATCTTAACAGTTATATAATTGCAATCAATCTCTTGTCTCTTCAAAATTATGGTGTTTGTGGATAAAGTTTTGTTGAAATCTTGGTTACACTTTGTCCTCAAGTTTCAGCCAAGTTGTTATTTCTGGTTGTAGTTCCAATAAAACTTCTCACAACTTTCTCATGTTGAAGATAAATTGCATTTCATTATTTGATAGGCATTTGATTTTCTTTAGTCTGTGCTTCTTCTCTGCCACTATTGGTCTCTCTATTGTCTTTCATCCTCCAGTTCTTGTTCTCTTGTTTGCTTTGTCCTCACATAATTGTTTCTTGGTCATCTTAACATGTTCACATGTTTAAGCGGTCCTTTCAAATTGCCAAATCTGTTCTCTTTTTTTCCTCACTACAGCCTACACGTAACCTCTCCTCTACTCTAATCCTGGTATGTTTATTAGGCTATCACAGTGACCCCTGTGCTGATTTGGAAGTGTAGACTGAGATTCTAGTAGCTAGTGTAAGCAGTTAAAGCTGCCGAGAAATGGTTGTAAGAGAAGCTGAGGGTGGAGGAGAAAAGAAGTGAGGGAAGAAGTTTGGAAACACAGGTTTCAAACCATGTGCCGGAATTTCTCAGTTGTAAAATTAGAAGGTGAGAAACACGGGCTTATCTCATAACATTGCTGGTTTGGAGTTGAGTCTCACAGGTTAAGAGATTGGGTGAAGTTACGATTTCCAACTATTTCTTGACTATGATATTGATACTTAATGTAGCTTTGTTTGTCATTAGCAAATTGCAATAGAATTTGTAGTTACCGTTATCTATTAATTACCATATCCTGAAGCCTGAAGGTCACCCACAGGATGATGTTTCTCAAGGAGAAATGTCTAGTTTGCTTGGTTACTTTGACTTTCCATTTTCAATTAAAGAAGTATACAACTTCAGTTCCATTGTTTGAGATTTGGTTTAGGCCAATTTGGATGGCTCCCTGTTTACCTTTCCTGATTTTTTTCTGGACCGTCCCAATGTCCCTTTTTTCTGGGTTGTGCTTTCCTGGCAAGTGCACTCTTTTGCAATTCTCAGATTAAACATCATCAGAAATGAATGAAAAATGATAGATATTGAAGGAAAAAAACTAAACAAGTCTACAATCAAATGGTATGAAGAGTTAACCTCTAATCAGATATTACATAACACTGTAATAACTACCTTGGTCTAGGATTGCTCGAAAGATATACTTCTAAAAGTGTGGCTCTGCAAATCATCCATGCATCTAGCAGCATTTGGGAGCAGTGCATGTAATATAGGATGCTATAAAGCAACATTTTTAAAGTGTGAGTGGTCAAATCATTCAAACCACTTGCAGAGTTGGGAAAAGCAGTGGGTGTTAACTTAGCAATTTGTGTTCTCCACTATCCAATAACTGTTTTGTCCGGAACCTTACAAATAAAGACCTTTTCTGATATAAGTTGTGGTATAATCTTCAATTTGCTTCATCCCAGGAGGATCTATCAAAATGTTCTGCCTTTTTTTATATAATATGATGGTAACAGCAATCCGCTGAATGCAGGATTCAAGATCTGTGGGGGCCATAGCAGGTCTTGCAGTTGCTATAGTTTTTACCTGGAGAGTGTGGAGATCACCTAGTGGACCACAAAGGAGAATTCCTAAGCGACAAGGTACGACGCCTAGTAGTTCTGGTGTAAGCACTCATTCAAGTGCAAATGTGGAAACTTCAGGAGTTATCTCTTCTTCGGAGGATTCAAATGCTCAAAATGTTATTGATGAGTTCTTTC</genome_strand>
        <mrna_strand>AAAAGCTGAAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGAATTTGATATATGATTACTACAAGTAACATGGGTGATTCCTCCAAGGACGATTTCCTTCAGCTCATCAAGCGATTCGGCGCTTTTTTGACCGTGAAGATTTCTAATATCTTCCACACACTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCAAGATCTGTGGGGGCCATAGCAGGTCTTGCAGTTGCTATAGTTTTTACCTGGAGAGTGTGGAGATCACCTAGTGGACCACAAAGGAGAATTCCTAAGCGACAAGGTACGACGCCTAGTAGTTCTGGTGTAAGCACTCATTCAAGTGCAAATGTGGAAACTTCAGGAGTTATCTCTTCTTCGGAGGATTCAAATGCTCAAAATGTTATTGATGAGTTCTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E263480" ref_strand="+" ref_description="SGN-E263480 [cLEG-69-P22]">
      <seq>accgccggaaaagctgaaagctcgattcatcggtcaccggaaactcaaccgacgaagacaactaggaggaggtggaggagccaaatttgctgaatttgatatatgattactacaagtaacatgggtgattcctccaaggacgatttccttcagctcatcaagcgattcggcgcttttttgaccgtgaagatttctaatatcttccacacactggattcaagatctgtgggggccatagcaggtcttgcagttgctatagtttttacctggagagtgtggagatcacctagtggaccacaaaggagaattcctaagcgacaaggtacgacgcctagtagttctggtgtaagccctcattcaagtgcaaatgtggaaacttcccgaggtatctcttctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="4341" stop="1146"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4041" g_stop="3829" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="213" r_length="213" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3828" i_stop="1630" i_length="2199">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1629" g_stop="1446" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="214" r_stop="397" r_length="184" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E263480" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>397</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E263480" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4041" e_stop="3829"/>
          <exon e_start="1629" e_stop="1446"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCGCCGGAAAAGCTGAAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGAATTTGATATATGATTACTACAAGTAACATGGGTGATTCCTCCAAGGACGATTTCCTTCAGCTCATCAAGCGATTCGGCGCTTTTTTGACCGTGAAGATTTCTAATATCTTCCACACACTGGTTATTTCTCTTTCTCTTTCCCTATCTCCAGTTTTAACATCTCTTAATTGTGAATTAAGCACTGAACAATTTTAATTGATAAATCATGTTTACTGGAAAAAAAATGAGTTGAAGTTTGAGTTGTAATAGGAGATTGAAATTCGTGCTGAGAATTCCTAAATTGGCTCACATGATTACAAGCAAGGGCTTTGCTACGCACAATTTCTTGTAAGGGGAACTATAAGTTGACGCTAGATGTTATAATTGAAATTACCTTTTGCTAATTATACTGGGATATACAACTTGTTACTAGATGCATACTGTACTTAGGCAGCTTTAATCATGTTAAAATAAGAATAAGATCTATTGATGTTGTTTTTCAATTTTAGGAGAAACATTTCCACTAGACAAAAAGTAAGGTTCGAATACTTGGAATTCAGTTACTTATCTTAATGTTCTATAAACTTGAAAATTCTATCTGGAATGTGCTAGCTAGGTCACTGAATATATTTTAGAAGTAGCATTTGTGACCGGTATCATGAATGTCTGGCTTATTATATGAGTTGAGAGACACTTGAATTGGGGAATGGAGATTATCAAGGGTTTAATTATGTAATGATGTAGAGATGATTCTGATCAAATATCTATAACAATCATAACTCAAATGTCATAATATTGATCTTAACAGTTATATAATTGCAATCAATCTCTTGTCTCTTCAAAATTATGGTGTTTGTGGATAAAGTTTTGTTGAAATCTTGGTTACACTTTGTCCTCAAGTTTCAGCCAAGTTGTTATTTCTGGTTGTAGTTCCAATAAAACTTCTCACAACTTTCTCATGTTGAAGATAAATTGCATTTCATTATTTGATAGGCATTTGATTTTCTTTAGTCTGTGCTTCTTCTCTGCCACTATTGGTCTCTCTATTGTCTTTCATCCTCCAGTTCTTGTTCTCTTGTTTGCTTTGTCCTCACATAATTGTTTCTTGGTCATCTTAACATGTTCACATGTTTAAGCGGTCCTTTCAAATTGCCAAATCTGTTCTCTTTTTTTCCTCACTACAGCCTACACGTAACCTCTCCTCTACTCTAATCCTGGTATGTTTATTAGGCTATCACAGTGACCCCTGTGCTGATTTGGAAGTGTAGACTGAGATTCTAGTAGCTAGTGTAAGCAGTTAAAGCTGCCGAGAAATGGTTGTAAGAGAAGCTGAGGGTGGAGGAGAAAAGAAGTGAGGGAAGAAGTTTGGAAACACAGGTTTCAAACCATGTGCCGGAATTTCTCAGTTGTAAAATTAGAAGGTGAGAAACACGGGCTTATCTCATAACATTGCTGGTTTGGAGTTGAGTCTCACAGGTTAAGAGATTGGGTGAAGTTACGATTTCCAACTATTTCTTGACTATGATATTGATACTTAATGTAGCTTTGTTTGTCATTAGCAAATTGCAATAGAATTTGTAGTTACCGTTATCTATTAATTACCATATCCTGAAGCCTGAAGGTCACCCACAGGATGATGTTTCTCAAGGAGAAATGTCTAGTTTGCTTGGTTACTTTGACTTTCCATTTTCAATTAAAGAAGTATACAACTTCAGTTCCATTGTTTGAGATTTGGTTTAGGCCAATTTGGATGGCTCCCTGTTTACCTTTCCTGATTTTTTTCTGGACCGTCCCAATGTCCCTTTTTTCTGGGTTGTGCTTTCCTGGCAAGTGCACTCTTTTGCAATTCTCAGATTAAACATCATCAGAAATGAATGAAAAATGATAGATATTGAAGGAAAAAAACTAAACAAGTCTACAATCAAATGGTATGAAGAGTTAACCTCTAATCAGATATTACATAACACTGTAATAACTACCTTGGTCTAGGATTGCTCGAAAGATATACTTCTAAAAGTGTGGCTCTGCAAATCATCCATGCATCTAGCAGCATTTGGGAGCAGTGCATGTAATATAGGATGCTATAAAGCAACATTTTTAAAGTGTGAGTGGTCAAATCATTCAAACCACTTGCAGAGTTGGGAAAAGCAGTGGGTGTTAACTTAGCAATTTGTGTTCTCCACTATCCAATAACTGTTTTGTCCGGAACCTTACAAATAAAGACCTTTTCTGATATAAGTTGTGGTATAATCTTCAATTTGCTTCATCCCAGGAGGATCTATCAAAATGTTCTGCCTTTTTTTATATAATATGATGGTAACAGCAATCCGCTGAATGCAGGATTCAAGATCTGTGGGGGCCATAGCAGGTCTTGCAGTTGCTATAGTTTTTACCTGGAGAGTGTGGAGATCACCTAGTGGACCACAAAGGAGAATTCCTAAGCGACAAGGTACGACGCCTAGTAGTTCTGGTGTAAGCACTCATTCAAGTGCAAATGTGGAAACTTCAGGAGTTATCTCTTCTT</genome_strand>
        <mrna_strand>ACCGCCGGAAAAGCTGAAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGAATTTGATATATGATTACTACAAGTAACATGGGTGATTCCTCCAAGGACGATTTCCTTCAGCTCATCAAGCGATTCGGCGCTTTTTTGACCGTGAAGATTTCTAATATCTTCCACACACTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCAAGATCTGTGGGGGCCATAGCAGGTCTTGCAGTTGCTATAGTTTTTACCTGGAGAGTGTGGAGATCACCTAGTGGACCACAAAGGAGAATTCCTAAGCGACAAGGTACGACGCCTAGTAGTTCTGGTGTAAGCCCTCATTCAAGTGCAAATGTGGAAACTTCCCGAGGTATCTCTTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E326411" ref_strand="+" ref_description="SGN-E326411 [cTOC-14-C12]">
      <seq>cgattttctgtccctatttgtcaatttcgtatttggttccatcaaaaactgggactacaaagtcacggtggagaccgccggaaaagctgaaagctcgattcatcggtcaccggaaactcaaccgacgaagacaactaggaggaggtggaggagccaaatttgctgaatttgatatatgattactacaagtaacatgggtgattcctccaaggacgatttccttcagctcatcaagcgattcggcgcttttttgaccgtgaagatttctaatatcttccacacactggattcaagatctgtgggggccatagcacgtcttgcagttgctatagtttttacctggagagtgtggagatcacctagtggaccacaaaggagaattcctaagcgacaaggtacgacgcctagtagttctggtgtaagcactcattcaagtgcaaatgtggaaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="4414" stop="1165"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4114" g_stop="3829" g_length="286"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="286" r_length="286" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3828" i_stop="1630" i_length="2199">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1629" g_stop="1465" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="451" r_length="165" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E326411" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>451</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E326411" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4114" e_stop="3829"/>
          <exon e_start="1629" e_stop="1465"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGATTCGCTGTCCCTATTTGTCAATTTCATATTTATTTCCATCAAAAACTTGGACTACAAAGTCACGGTGGAGACCGCCGGAAAAGCTGAAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGAATTTGATATATGATTACTACAAGTAACATGGGTGATTCCTCCAAGGACGATTTCCTTCAGCTCATCAAGCGATTCGGCGCTTTTTTGACCGTGAAGATTTCTAATATCTTCCACACACTGGTTATTTCTCTTTCTCTTTCCCTATCTCCAGTTTTAACATCTCTTAATTGTGAATTAAGCACTGAACAATTTTAATTGATAAATCATGTTTACTGGAAAAAAAATGAGTTGAAGTTTGAGTTGTAATAGGAGATTGAAATTCGTGCTGAGAATTCCTAAATTGGCTCACATGATTACAAGCAAGGGCTTTGCTACGCACAATTTCTTGTAAGGGGAACTATAAGTTGACGCTAGATGTTATAATTGAAATTACCTTTTGCTAATTATACTGGGATATACAACTTGTTACTAGATGCATACTGTACTTAGGCAGCTTTAATCATGTTAAAATAAGAATAAGATCTATTGATGTTGTTTTTCAATTTTAGGAGAAACATTTCCACTAGACAAAAAGTAAGGTTCGAATACTTGGAATTCAGTTACTTATCTTAATGTTCTATAAACTTGAAAATTCTATCTGGAATGTGCTAGCTAGGTCACTGAATATATTTTAGAAGTAGCATTTGTGACCGGTATCATGAATGTCTGGCTTATTATATGAGTTGAGAGACACTTGAATTGGGGAATGGAGATTATCAAGGGTTTAATTATGTAATGATGTAGAGATGATTCTGATCAAATATCTATAACAATCATAACTCAAATGTCATAATATTGATCTTAACAGTTATATAATTGCAATCAATCTCTTGTCTCTTCAAAATTATGGTGTTTGTGGATAAAGTTTTGTTGAAATCTTGGTTACACTTTGTCCTCAAGTTTCAGCCAAGTTGTTATTTCTGGTTGTAGTTCCAATAAAACTTCTCACAACTTTCTCATGTTGAAGATAAATTGCATTTCATTATTTGATAGGCATTTGATTTTCTTTAGTCTGTGCTTCTTCTCTGCCACTATTGGTCTCTCTATTGTCTTTCATCCTCCAGTTCTTGTTCTCTTGTTTGCTTTGTCCTCACATAATTGTTTCTTGGTCATCTTAACATGTTCACATGTTTAAGCGGTCCTTTCAAATTGCCAAATCTGTTCTCTTTTTTTCCTCACTACAGCCTACACGTAACCTCTCCTCTACTCTAATCCTGGTATGTTTATTAGGCTATCACAGTGACCCCTGTGCTGATTTGGAAGTGTAGACTGAGATTCTAGTAGCTAGTGTAAGCAGTTAAAGCTGCCGAGAAATGGTTGTAAGAGAAGCTGAGGGTGGAGGAGAAAAGAAGTGAGGGAAGAAGTTTGGAAACACAGGTTTCAAACCATGTGCCGGAATTTCTCAGTTGTAAAATTAGAAGGTGAGAAACACGGGCTTATCTCATAACATTGCTGGTTTGGAGTTGAGTCTCACAGGTTAAGAGATTGGGTGAAGTTACGATTTCCAACTATTTCTTGACTATGATATTGATACTTAATGTAGCTTTGTTTGTCATTAGCAAATTGCAATAGAATTTGTAGTTACCGTTATCTATTAATTACCATATCCTGAAGCCTGAAGGTCACCCACAGGATGATGTTTCTCAAGGAGAAATGTCTAGTTTGCTTGGTTACTTTGACTTTCCATTTTCAATTAAAGAAGTATACAACTTCAGTTCCATTGTTTGAGATTTGGTTTAGGCCAATTTGGATGGCTCCCTGTTTACCTTTCCTGATTTTTTTCTGGACCGTCCCAATGTCCCTTTTTTCTGGGTTGTGCTTTCCTGGCAAGTGCACTCTTTTGCAATTCTCAGATTAAACATCATCAGAAATGAATGAAAAATGATAGATATTGAAGGAAAAAAACTAAACAAGTCTACAATCAAATGGTATGAAGAGTTAACCTCTAATCAGATATTACATAACACTGTAATAACTACCTTGGTCTAGGATTGCTCGAAAGATATACTTCTAAAAGTGTGGCTCTGCAAATCATCCATGCATCTAGCAGCATTTGGGAGCAGTGCATGTAATATAGGATGCTATAAAGCAACATTTTTAAAGTGTGAGTGGTCAAATCATTCAAACCACTTGCAGAGTTGGGAAAAGCAGTGGGTGTTAACTTAGCAATTTGTGTTCTCCACTATCCAATAACTGTTTTGTCCGGAACCTTACAAATAAAGACCTTTTCTGATATAAGTTGTGGTATAATCTTCAATTTGCTTCATCCCAGGAGGATCTATCAAAATGTTCTGCCTTTTTTTATATAATATGATGGTAACAGCAATCCGCTGAATGCAGGATTCAAGATCTGTGGGGGCCATAGCAGGTCTTGCAGTTGCTATAGTTTTTACCTGGAGAGTGTGGAGATCACCTAGTGGACCACAAAGGAGAATTCCTAAGCGACAAGGTACGACGCCTAGTAGTTCTGGTGTAAGCACTCATTCAAGTGCAAATGTGGAAACT</genome_strand>
        <mrna_strand>CGATTTTCTGTCCCTATTTGTCAATTTCGTATTTGGTTCCATCAAAAACTGGGACTACAAAGTCACGGTGGAGACCGCCGGAAAAGCTGAAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGAATTTGATATATGATTACTACAAGTAACATGGGTGATTCCTCCAAGGACGATTTCCTTCAGCTCATCAAGCGATTCGGCGCTTTTTTGACCGTGAAGATTTCTAATATCTTCCACACACTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCAAGATCTGTGGGGGCCATAGCACGTCTTGCAGTTGCTATAGTTTTTACCTGGAGAGTGTGGAGATCACCTAGTGGACCACAAAGGAGAATTCCTAAGCGACAAGGTACGACGCCTAGTAGTTCTGGTGTAAGCACTCATTCAAGTGCAAATGTGGAAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E244782" ref_strand="+" ref_description="SGN-E244782 [cLED-38-H14]">
      <seq>cgccggaaaagctgaaagctcgattcatcggtcaccggaaactcaaccgacgaagacaactaggaggaggtggaggagccaaatttgctgaatttgatatatgattactacaagtaacatgggtgattcctccaaggacgatttccttcagctcatcaagcgattcggcgcttttttgaccgtgaagatttctaatatcttccacacactggattcaagatctgtgggggccatagcaggtcttgcagttgctatagtttttacctggagagtgtggagatcacctagtggaccacaaaggagaattcctaagcgacaaggtacgacgcctagtagttctggtgtaagcactcattcaagtgcaaatgtggaaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="4339" stop="1165"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4039" g_stop="3829" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="211" r_length="211" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3828" i_stop="1630" i_length="2199">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1629" g_stop="1465" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="212" r_stop="376" r_length="165" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E244782" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>376</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E244782" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4039" e_stop="3829"/>
          <exon e_start="1629" e_stop="1465"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCCGGAAAAGCTGAAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGAATTTGATATATGATTACTACAAGTAACATGGGTGATTCCTCCAAGGACGATTTCCTTCAGCTCATCAAGCGATTCGGCGCTTTTTTGACCGTGAAGATTTCTAATATCTTCCACACACTGGTTATTTCTCTTTCTCTTTCCCTATCTCCAGTTTTAACATCTCTTAATTGTGAATTAAGCACTGAACAATTTTAATTGATAAATCATGTTTACTGGAAAAAAAATGAGTTGAAGTTTGAGTTGTAATAGGAGATTGAAATTCGTGCTGAGAATTCCTAAATTGGCTCACATGATTACAAGCAAGGGCTTTGCTACGCACAATTTCTTGTAAGGGGAACTATAAGTTGACGCTAGATGTTATAATTGAAATTACCTTTTGCTAATTATACTGGGATATACAACTTGTTACTAGATGCATACTGTACTTAGGCAGCTTTAATCATGTTAAAATAAGAATAAGATCTATTGATGTTGTTTTTCAATTTTAGGAGAAACATTTCCACTAGACAAAAAGTAAGGTTCGAATACTTGGAATTCAGTTACTTATCTTAATGTTCTATAAACTTGAAAATTCTATCTGGAATGTGCTAGCTAGGTCACTGAATATATTTTAGAAGTAGCATTTGTGACCGGTATCATGAATGTCTGGCTTATTATATGAGTTGAGAGACACTTGAATTGGGGAATGGAGATTATCAAGGGTTTAATTATGTAATGATGTAGAGATGATTCTGATCAAATATCTATAACAATCATAACTCAAATGTCATAATATTGATCTTAACAGTTATATAATTGCAATCAATCTCTTGTCTCTTCAAAATTATGGTGTTTGTGGATAAAGTTTTGTTGAAATCTTGGTTACACTTTGTCCTCAAGTTTCAGCCAAGTTGTTATTTCTGGTTGTAGTTCCAATAAAACTTCTCACAACTTTCTCATGTTGAAGATAAATTGCATTTCATTATTTGATAGGCATTTGATTTTCTTTAGTCTGTGCTTCTTCTCTGCCACTATTGGTCTCTCTATTGTCTTTCATCCTCCAGTTCTTGTTCTCTTGTTTGCTTTGTCCTCACATAATTGTTTCTTGGTCATCTTAACATGTTCACATGTTTAAGCGGTCCTTTCAAATTGCCAAATCTGTTCTCTTTTTTTCCTCACTACAGCCTACACGTAACCTCTCCTCTACTCTAATCCTGGTATGTTTATTAGGCTATCACAGTGACCCCTGTGCTGATTTGGAAGTGTAGACTGAGATTCTAGTAGCTAGTGTAAGCAGTTAAAGCTGCCGAGAAATGGTTGTAAGAGAAGCTGAGGGTGGAGGAGAAAAGAAGTGAGGGAAGAAGTTTGGAAACACAGGTTTCAAACCATGTGCCGGAATTTCTCAGTTGTAAAATTAGAAGGTGAGAAACACGGGCTTATCTCATAACATTGCTGGTTTGGAGTTGAGTCTCACAGGTTAAGAGATTGGGTGAAGTTACGATTTCCAACTATTTCTTGACTATGATATTGATACTTAATGTAGCTTTGTTTGTCATTAGCAAATTGCAATAGAATTTGTAGTTACCGTTATCTATTAATTACCATATCCTGAAGCCTGAAGGTCACCCACAGGATGATGTTTCTCAAGGAGAAATGTCTAGTTTGCTTGGTTACTTTGACTTTCCATTTTCAATTAAAGAAGTATACAACTTCAGTTCCATTGTTTGAGATTTGGTTTAGGCCAATTTGGATGGCTCCCTGTTTACCTTTCCTGATTTTTTTCTGGACCGTCCCAATGTCCCTTTTTTCTGGGTTGTGCTTTCCTGGCAAGTGCACTCTTTTGCAATTCTCAGATTAAACATCATCAGAAATGAATGAAAAATGATAGATATTGAAGGAAAAAAACTAAACAAGTCTACAATCAAATGGTATGAAGAGTTAACCTCTAATCAGATATTACATAACACTGTAATAACTACCTTGGTCTAGGATTGCTCGAAAGATATACTTCTAAAAGTGTGGCTCTGCAAATCATCCATGCATCTAGCAGCATTTGGGAGCAGTGCATGTAATATAGGATGCTATAAAGCAACATTTTTAAAGTGTGAGTGGTCAAATCATTCAAACCACTTGCAGAGTTGGGAAAAGCAGTGGGTGTTAACTTAGCAATTTGTGTTCTCCACTATCCAATAACTGTTTTGTCCGGAACCTTACAAATAAAGACCTTTTCTGATATAAGTTGTGGTATAATCTTCAATTTGCTTCATCCCAGGAGGATCTATCAAAATGTTCTGCCTTTTTTTATATAATATGATGGTAACAGCAATCCGCTGAATGCAGGATTCAAGATCTGTGGGGGCCATAGCAGGTCTTGCAGTTGCTATAGTTTTTACCTGGAGAGTGTGGAGATCACCTAGTGGACCACAAAGGAGAATTCCTAAGCGACAAGGTACGACGCCTAGTAGTTCTGGTGTAAGCACTCATTCAAGTGCAAATGTGGAAACT</genome_strand>
        <mrna_strand>CGCCGGAAAAGCTGAAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGAATTTGATATATGATTACTACAAGTAACATGGGTGATTCCTCCAAGGACGATTTCCTTCAGCTCATCAAGCGATTCGGCGCTTTTTTGACCGTGAAGATTTCTAATATCTTCCACACACTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCAAGATCTGTGGGGGCCATAGCAGGTCTTGCAGTTGCTATAGTTTTTACCTGGAGAGTGTGGAGATCACCTAGTGGACCACAAAGGAGAATTCCTAAGCGACAAGGTACGACGCCTAGTAGTTCTGGTGTAAGCACTCATTCAAGTGCAAATGTGGAAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E336808" ref_strand="+" ref_description="SGN-E336808 [cTOE-5-B19]">
      <seq>tgaaagctcgattcatcggtcaccggaaactcaaccgacgaagacaactaggaggaggtggaggagccaaatttgctgaatttgatatatgattactacaagtaacatgggtgattcctccaaggacgatttccttcagctcatcaagcgattcggcgcttttttgaccgtgaagatttctaatatcttccacacactggattcaagatctgtgggggccatagcaggtcttgcagttgctatagtttttacctggagagtgtggagatcacctagtggaccacaaaggagaattcctaagcgacaaggtacgacgcctagtagttctggtgtaagcactcatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="4327" stop="1185"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4027" g_stop="3829" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="199" r_length="199" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3828" i_stop="1630" i_length="2199">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1629" g_stop="1485" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="200" r_stop="344" r_length="145" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E336808" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>344</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E336808" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4027" e_stop="3829"/>
          <exon e_start="1629" e_stop="1485"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGAATTTGATATATGATTACTACAAGTAACATGGGTGATTCCTCCAAGGACGATTTCCTTCAGCTCATCAAGCGATTCGGCGCTTTTTTGACCGTGAAGATTTCTAATATCTTCCACACACTGGTTATTTCTCTTTCTCTTTCCCTATCTCCAGTTTTAACATCTCTTAATTGTGAATTAAGCACTGAACAATTTTAATTGATAAATCATGTTTACTGGAAAAAAAATGAGTTGAAGTTTGAGTTGTAATAGGAGATTGAAATTCGTGCTGAGAATTCCTAAATTGGCTCACATGATTACAAGCAAGGGCTTTGCTACGCACAATTTCTTGTAAGGGGAACTATAAGTTGACGCTAGATGTTATAATTGAAATTACCTTTTGCTAATTATACTGGGATATACAACTTGTTACTAGATGCATACTGTACTTAGGCAGCTTTAATCATGTTAAAATAAGAATAAGATCTATTGATGTTGTTTTTCAATTTTAGGAGAAACATTTCCACTAGACAAAAAGTAAGGTTCGAATACTTGGAATTCAGTTACTTATCTTAATGTTCTATAAACTTGAAAATTCTATCTGGAATGTGCTAGCTAGGTCACTGAATATATTTTAGAAGTAGCATTTGTGACCGGTATCATGAATGTCTGGCTTATTATATGAGTTGAGAGACACTTGAATTGGGGAATGGAGATTATCAAGGGTTTAATTATGTAATGATGTAGAGATGATTCTGATCAAATATCTATAACAATCATAACTCAAATGTCATAATATTGATCTTAACAGTTATATAATTGCAATCAATCTCTTGTCTCTTCAAAATTATGGTGTTTGTGGATAAAGTTTTGTTGAAATCTTGGTTACACTTTGTCCTCAAGTTTCAGCCAAGTTGTTATTTCTGGTTGTAGTTCCAATAAAACTTCTCACAACTTTCTCATGTTGAAGATAAATTGCATTTCATTATTTGATAGGCATTTGATTTTCTTTAGTCTGTGCTTCTTCTCTGCCACTATTGGTCTCTCTATTGTCTTTCATCCTCCAGTTCTTGTTCTCTTGTTTGCTTTGTCCTCACATAATTGTTTCTTGGTCATCTTAACATGTTCACATGTTTAAGCGGTCCTTTCAAATTGCCAAATCTGTTCTCTTTTTTTCCTCACTACAGCCTACACGTAACCTCTCCTCTACTCTAATCCTGGTATGTTTATTAGGCTATCACAGTGACCCCTGTGCTGATTTGGAAGTGTAGACTGAGATTCTAGTAGCTAGTGTAAGCAGTTAAAGCTGCCGAGAAATGGTTGTAAGAGAAGCTGAGGGTGGAGGAGAAAAGAAGTGAGGGAAGAAGTTTGGAAACACAGGTTTCAAACCATGTGCCGGAATTTCTCAGTTGTAAAATTAGAAGGTGAGAAACACGGGCTTATCTCATAACATTGCTGGTTTGGAGTTGAGTCTCACAGGTTAAGAGATTGGGTGAAGTTACGATTTCCAACTATTTCTTGACTATGATATTGATACTTAATGTAGCTTTGTTTGTCATTAGCAAATTGCAATAGAATTTGTAGTTACCGTTATCTATTAATTACCATATCCTGAAGCCTGAAGGTCACCCACAGGATGATGTTTCTCAAGGAGAAATGTCTAGTTTGCTTGGTTACTTTGACTTTCCATTTTCAATTAAAGAAGTATACAACTTCAGTTCCATTGTTTGAGATTTGGTTTAGGCCAATTTGGATGGCTCCCTGTTTACCTTTCCTGATTTTTTTCTGGACCGTCCCAATGTCCCTTTTTTCTGGGTTGTGCTTTCCTGGCAAGTGCACTCTTTTGCAATTCTCAGATTAAACATCATCAGAAATGAATGAAAAATGATAGATATTGAAGGAAAAAAACTAAACAAGTCTACAATCAAATGGTATGAAGAGTTAACCTCTAATCAGATATTACATAACACTGTAATAACTACCTTGGTCTAGGATTGCTCGAAAGATATACTTCTAAAAGTGTGGCTCTGCAAATCATCCATGCATCTAGCAGCATTTGGGAGCAGTGCATGTAATATAGGATGCTATAAAGCAACATTTTTAAAGTGTGAGTGGTCAAATCATTCAAACCACTTGCAGAGTTGGGAAAAGCAGTGGGTGTTAACTTAGCAATTTGTGTTCTCCACTATCCAATAACTGTTTTGTCCGGAACCTTACAAATAAAGACCTTTTCTGATATAAGTTGTGGTATAATCTTCAATTTGCTTCATCCCAGGAGGATCTATCAAAATGTTCTGCCTTTTTTTATATAATATGATGGTAACAGCAATCCGCTGAATGCAGGATTCAAGATCTGTGGGGGCCATAGCAGGTCTTGCAGTTGCTATAGTTTTTACCTGGAGAGTGTGGAGATCACCTAGTGGACCACAAAGGAGAATTCCTAAGCGACAAGGTACGACGCCTAGTAGTTCTGGTGTAAGCACTCATT</genome_strand>
        <mrna_strand>TGAAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGAATTTGATATATGATTACTACAAGTAACATGGGTGATTCCTCCAAGGACGATTTCCTTCAGCTCATCAAGCGATTCGGCGCTTTTTTGACCGTGAAGATTTCTAATATCTTCCACACACTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCAAGATCTGTGGGGGCCATAGCAGGTCTTGCAGTTGCTATAGTTTTTACCTGGAGAGTGTGGAGATCACCTAGTGGACCACAAAGGAGAATTCCTAAGCGACAAGGTACGACGCCTAGTAGTTCTGGTGTAAGCACTCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E204818" ref_strand="+" ref_description="SGN-E204818 [cLEC-14-I14]">
      <seq>tgaaagctcgattcatcggtcaccggaaactcaaccgacgaagacaactaggaggaggtggaggagccaaatttgctgaatttgatatatgattactacaagtaacatgggtgattcctccaaggacgatttccttcagctcatcaagcgattcggcgcttttttgaccgtgaagatttctaatatcttccacacactggattcaagatctgtgggggccatagcaggtcttgcagttgctatagtttttacctggagagtgtggagatcacctagtggaccacaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="4327" stop="1243"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4027" g_stop="3829" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="199" r_length="199" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3828" i_stop="1630" i_length="2199">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1629" g_stop="1543" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="200" r_stop="286" r_length="87" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E204818" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>286</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E204818" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4027" e_stop="3829"/>
          <exon e_start="1629" e_stop="1543"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGAATTTGATATATGATTACTACAAGTAACATGGGTGATTCCTCCAAGGACGATTTCCTTCAGCTCATCAAGCGATTCGGCGCTTTTTTGACCGTGAAGATTTCTAATATCTTCCACACACTGGTTATTTCTCTTTCTCTTTCCCTATCTCCAGTTTTAACATCTCTTAATTGTGAATTAAGCACTGAACAATTTTAATTGATAAATCATGTTTACTGGAAAAAAAATGAGTTGAAGTTTGAGTTGTAATAGGAGATTGAAATTCGTGCTGAGAATTCCTAAATTGGCTCACATGATTACAAGCAAGGGCTTTGCTACGCACAATTTCTTGTAAGGGGAACTATAAGTTGACGCTAGATGTTATAATTGAAATTACCTTTTGCTAATTATACTGGGATATACAACTTGTTACTAGATGCATACTGTACTTAGGCAGCTTTAATCATGTTAAAATAAGAATAAGATCTATTGATGTTGTTTTTCAATTTTAGGAGAAACATTTCCACTAGACAAAAAGTAAGGTTCGAATACTTGGAATTCAGTTACTTATCTTAATGTTCTATAAACTTGAAAATTCTATCTGGAATGTGCTAGCTAGGTCACTGAATATATTTTAGAAGTAGCATTTGTGACCGGTATCATGAATGTCTGGCTTATTATATGAGTTGAGAGACACTTGAATTGGGGAATGGAGATTATCAAGGGTTTAATTATGTAATGATGTAGAGATGATTCTGATCAAATATCTATAACAATCATAACTCAAATGTCATAATATTGATCTTAACAGTTATATAATTGCAATCAATCTCTTGTCTCTTCAAAATTATGGTGTTTGTGGATAAAGTTTTGTTGAAATCTTGGTTACACTTTGTCCTCAAGTTTCAGCCAAGTTGTTATTTCTGGTTGTAGTTCCAATAAAACTTCTCACAACTTTCTCATGTTGAAGATAAATTGCATTTCATTATTTGATAGGCATTTGATTTTCTTTAGTCTGTGCTTCTTCTCTGCCACTATTGGTCTCTCTATTGTCTTTCATCCTCCAGTTCTTGTTCTCTTGTTTGCTTTGTCCTCACATAATTGTTTCTTGGTCATCTTAACATGTTCACATGTTTAAGCGGTCCTTTCAAATTGCCAAATCTGTTCTCTTTTTTTCCTCACTACAGCCTACACGTAACCTCTCCTCTACTCTAATCCTGGTATGTTTATTAGGCTATCACAGTGACCCCTGTGCTGATTTGGAAGTGTAGACTGAGATTCTAGTAGCTAGTGTAAGCAGTTAAAGCTGCCGAGAAATGGTTGTAAGAGAAGCTGAGGGTGGAGGAGAAAAGAAGTGAGGGAAGAAGTTTGGAAACACAGGTTTCAAACCATGTGCCGGAATTTCTCAGTTGTAAAATTAGAAGGTGAGAAACACGGGCTTATCTCATAACATTGCTGGTTTGGAGTTGAGTCTCACAGGTTAAGAGATTGGGTGAAGTTACGATTTCCAACTATTTCTTGACTATGATATTGATACTTAATGTAGCTTTGTTTGTCATTAGCAAATTGCAATAGAATTTGTAGTTACCGTTATCTATTAATTACCATATCCTGAAGCCTGAAGGTCACCCACAGGATGATGTTTCTCAAGGAGAAATGTCTAGTTTGCTTGGTTACTTTGACTTTCCATTTTCAATTAAAGAAGTATACAACTTCAGTTCCATTGTTTGAGATTTGGTTTAGGCCAATTTGGATGGCTCCCTGTTTACCTTTCCTGATTTTTTTCTGGACCGTCCCAATGTCCCTTTTTTCTGGGTTGTGCTTTCCTGGCAAGTGCACTCTTTTGCAATTCTCAGATTAAACATCATCAGAAATGAATGAAAAATGATAGATATTGAAGGAAAAAAACTAAACAAGTCTACAATCAAATGGTATGAAGAGTTAACCTCTAATCAGATATTACATAACACTGTAATAACTACCTTGGTCTAGGATTGCTCGAAAGATATACTTCTAAAAGTGTGGCTCTGCAAATCATCCATGCATCTAGCAGCATTTGGGAGCAGTGCATGTAATATAGGATGCTATAAAGCAACATTTTTAAAGTGTGAGTGGTCAAATCATTCAAACCACTTGCAGAGTTGGGAAAAGCAGTGGGTGTTAACTTAGCAATTTGTGTTCTCCACTATCCAATAACTGTTTTGTCCGGAACCTTACAAATAAAGACCTTTTCTGATATAAGTTGTGGTATAATCTTCAATTTGCTTCATCCCAGGAGGATCTATCAAAATGTTCTGCCTTTTTTTATATAATATGATGGTAACAGCAATCCGCTGAATGCAGGATTCAAGATCTGTGGGGGCCATAGCAGGTCTTGCAGTTGCTATAGTTTTTACCTGGAGAGTGTGGAGATCACCTAGTGGACCACAA</genome_strand>
        <mrna_strand>TGAAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGAATTTGATATATGATTACTACAAGTAACATGGGTGATTCCTCCAAGGACGATTTCCTTCAGCTCATCAAGCGATTCGGCGCTTTTTTGACCGTGAAGATTTCTAATATCTTCCACACACTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCAAGATCTGTGGGGGCCATAGCAGGTCTTGCAGTTGCTATAGTTTTTACCTGGAGAGTGTGGAGATCACCTAGTGGACCACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E309835" ref_strand="+" ref_description="SGN-E309835 [cLEZ-10-E16]">
      <seq>tcacggtggagaccgccggaaaagctgaaagctcgattcatcggtcaccggaaactcaaccgacgaagacaactaggaggaggtggaggagccaaatttgctgaatttgatatatgattactacaagtaacatgggtgattcctccaaggacgatttccttcagctcatcaagcgattcggcgcttttttgaccgtgaagatttctaatatcttccacacactggattcaagatctgtgggggccatagcaggtcttgcagctgctatagcttttacctggagagtgtggagatcacctagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="4352" stop="1252"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4052" g_stop="3829" g_length="224"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="224" r_length="224" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3828" i_stop="1630" i_length="2199">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1629" g_stop="1552" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="302" r_length="78" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E309835" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>302</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E309835" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4052" e_stop="3829"/>
          <exon e_start="1629" e_stop="1552"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACGGTGGAGACCGCCGGAAAAGCTGAAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGAATTTGATATATGATTACTACAAGTAACATGGGTGATTCCTCCAAGGACGATTTCCTTCAGCTCATCAAGCGATTCGGCGCTTTTTTGACCGTGAAGATTTCTAATATCTTCCACACACTGGTTATTTCTCTTTCTCTTTCCCTATCTCCAGTTTTAACATCTCTTAATTGTGAATTAAGCACTGAACAATTTTAATTGATAAATCATGTTTACTGGAAAAAAAATGAGTTGAAGTTTGAGTTGTAATAGGAGATTGAAATTCGTGCTGAGAATTCCTAAATTGGCTCACATGATTACAAGCAAGGGCTTTGCTACGCACAATTTCTTGTAAGGGGAACTATAAGTTGACGCTAGATGTTATAATTGAAATTACCTTTTGCTAATTATACTGGGATATACAACTTGTTACTAGATGCATACTGTACTTAGGCAGCTTTAATCATGTTAAAATAAGAATAAGATCTATTGATGTTGTTTTTCAATTTTAGGAGAAACATTTCCACTAGACAAAAAGTAAGGTTCGAATACTTGGAATTCAGTTACTTATCTTAATGTTCTATAAACTTGAAAATTCTATCTGGAATGTGCTAGCTAGGTCACTGAATATATTTTAGAAGTAGCATTTGTGACCGGTATCATGAATGTCTGGCTTATTATATGAGTTGAGAGACACTTGAATTGGGGAATGGAGATTATCAAGGGTTTAATTATGTAATGATGTAGAGATGATTCTGATCAAATATCTATAACAATCATAACTCAAATGTCATAATATTGATCTTAACAGTTATATAATTGCAATCAATCTCTTGTCTCTTCAAAATTATGGTGTTTGTGGATAAAGTTTTGTTGAAATCTTGGTTACACTTTGTCCTCAAGTTTCAGCCAAGTTGTTATTTCTGGTTGTAGTTCCAATAAAACTTCTCACAACTTTCTCATGTTGAAGATAAATTGCATTTCATTATTTGATAGGCATTTGATTTTCTTTAGTCTGTGCTTCTTCTCTGCCACTATTGGTCTCTCTATTGTCTTTCATCCTCCAGTTCTTGTTCTCTTGTTTGCTTTGTCCTCACATAATTGTTTCTTGGTCATCTTAACATGTTCACATGTTTAAGCGGTCCTTTCAAATTGCCAAATCTGTTCTCTTTTTTTCCTCACTACAGCCTACACGTAACCTCTCCTCTACTCTAATCCTGGTATGTTTATTAGGCTATCACAGTGACCCCTGTGCTGATTTGGAAGTGTAGACTGAGATTCTAGTAGCTAGTGTAAGCAGTTAAAGCTGCCGAGAAATGGTTGTAAGAGAAGCTGAGGGTGGAGGAGAAAAGAAGTGAGGGAAGAAGTTTGGAAACACAGGTTTCAAACCATGTGCCGGAATTTCTCAGTTGTAAAATTAGAAGGTGAGAAACACGGGCTTATCTCATAACATTGCTGGTTTGGAGTTGAGTCTCACAGGTTAAGAGATTGGGTGAAGTTACGATTTCCAACTATTTCTTGACTATGATATTGATACTTAATGTAGCTTTGTTTGTCATTAGCAAATTGCAATAGAATTTGTAGTTACCGTTATCTATTAATTACCATATCCTGAAGCCTGAAGGTCACCCACAGGATGATGTTTCTCAAGGAGAAATGTCTAGTTTGCTTGGTTACTTTGACTTTCCATTTTCAATTAAAGAAGTATACAACTTCAGTTCCATTGTTTGAGATTTGGTTTAGGCCAATTTGGATGGCTCCCTGTTTACCTTTCCTGATTTTTTTCTGGACCGTCCCAATGTCCCTTTTTTCTGGGTTGTGCTTTCCTGGCAAGTGCACTCTTTTGCAATTCTCAGATTAAACATCATCAGAAATGAATGAAAAATGATAGATATTGAAGGAAAAAAACTAAACAAGTCTACAATCAAATGGTATGAAGAGTTAACCTCTAATCAGATATTACATAACACTGTAATAACTACCTTGGTCTAGGATTGCTCGAAAGATATACTTCTAAAAGTGTGGCTCTGCAAATCATCCATGCATCTAGCAGCATTTGGGAGCAGTGCATGTAATATAGGATGCTATAAAGCAACATTTTTAAAGTGTGAGTGGTCAAATCATTCAAACCACTTGCAGAGTTGGGAAAAGCAGTGGGTGTTAACTTAGCAATTTGTGTTCTCCACTATCCAATAACTGTTTTGTCCGGAACCTTACAAATAAAGACCTTTTCTGATATAAGTTGTGGTATAATCTTCAATTTGCTTCATCCCAGGAGGATCTATCAAAATGTTCTGCCTTTTTTTATATAATATGATGGTAACAGCAATCCGCTGAATGCAGGATTCAAGATCTGTGGGGGCCATAGCAGGTCTTGCAGTTGCTATAGTTTTTACCTGGAGAGTGTGGAGATCACCTAGT</genome_strand>
        <mrna_strand>TCACGGTGGAGACCGCCGGAAAAGCTGAAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGAATTTGATATATGATTACTACAAGTAACATGGGTGATTCCTCCAAGGACGATTTCCTTCAGCTCATCAAGCGATTCGGCGCTTTTTTGACCGTGAAGATTTCTAATATCTTCCACACACTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCAAGATCTGTGGGGGCCATAGCAGGTCTTGCAGCTGCTATAGCTTTTACCTGGAGAGTGTGGAGATCACCTAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E239961" ref_strand="+" ref_description="SGN-E239961 [cLED-29-H5]">
      <seq>cgccggaaaagctgaaagctcgattcatcggtcaccggaaactcaaccgacgaagacaactaggaggaggtggaggagccaaatttgctgaatttgatatatgattactacaagtaacatgggtgattcctccaaggacgatttccttcagctcatcaagcgattcggcgcttttttgaccgtgaagatttctaatatcttccacacactggattcaagatctgtgggggccatagcaggtcttgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="4339" stop="1294"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4039" g_stop="3829" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="211" r_length="211" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3828" i_stop="1630" i_length="2199">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1629" g_stop="1594" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="212" r_stop="247" r_length="36" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E239961" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>247</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E239961" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4039" e_stop="3829"/>
          <exon e_start="1629" e_stop="1594"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCCGGAAAAGCTGAAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGAATTTGATATATGATTACTACAAGTAACATGGGTGATTCCTCCAAGGACGATTTCCTTCAGCTCATCAAGCGATTCGGCGCTTTTTTGACCGTGAAGATTTCTAATATCTTCCACACACTGGTTATTTCTCTTTCTCTTTCCCTATCTCCAGTTTTAACATCTCTTAATTGTGAATTAAGCACTGAACAATTTTAATTGATAAATCATGTTTACTGGAAAAAAAATGAGTTGAAGTTTGAGTTGTAATAGGAGATTGAAATTCGTGCTGAGAATTCCTAAATTGGCTCACATGATTACAAGCAAGGGCTTTGCTACGCACAATTTCTTGTAAGGGGAACTATAAGTTGACGCTAGATGTTATAATTGAAATTACCTTTTGCTAATTATACTGGGATATACAACTTGTTACTAGATGCATACTGTACTTAGGCAGCTTTAATCATGTTAAAATAAGAATAAGATCTATTGATGTTGTTTTTCAATTTTAGGAGAAACATTTCCACTAGACAAAAAGTAAGGTTCGAATACTTGGAATTCAGTTACTTATCTTAATGTTCTATAAACTTGAAAATTCTATCTGGAATGTGCTAGCTAGGTCACTGAATATATTTTAGAAGTAGCATTTGTGACCGGTATCATGAATGTCTGGCTTATTATATGAGTTGAGAGACACTTGAATTGGGGAATGGAGATTATCAAGGGTTTAATTATGTAATGATGTAGAGATGATTCTGATCAAATATCTATAACAATCATAACTCAAATGTCATAATATTGATCTTAACAGTTATATAATTGCAATCAATCTCTTGTCTCTTCAAAATTATGGTGTTTGTGGATAAAGTTTTGTTGAAATCTTGGTTACACTTTGTCCTCAAGTTTCAGCCAAGTTGTTATTTCTGGTTGTAGTTCCAATAAAACTTCTCACAACTTTCTCATGTTGAAGATAAATTGCATTTCATTATTTGATAGGCATTTGATTTTCTTTAGTCTGTGCTTCTTCTCTGCCACTATTGGTCTCTCTATTGTCTTTCATCCTCCAGTTCTTGTTCTCTTGTTTGCTTTGTCCTCACATAATTGTTTCTTGGTCATCTTAACATGTTCACATGTTTAAGCGGTCCTTTCAAATTGCCAAATCTGTTCTCTTTTTTTCCTCACTACAGCCTACACGTAACCTCTCCTCTACTCTAATCCTGGTATGTTTATTAGGCTATCACAGTGACCCCTGTGCTGATTTGGAAGTGTAGACTGAGATTCTAGTAGCTAGTGTAAGCAGTTAAAGCTGCCGAGAAATGGTTGTAAGAGAAGCTGAGGGTGGAGGAGAAAAGAAGTGAGGGAAGAAGTTTGGAAACACAGGTTTCAAACCATGTGCCGGAATTTCTCAGTTGTAAAATTAGAAGGTGAGAAACACGGGCTTATCTCATAACATTGCTGGTTTGGAGTTGAGTCTCACAGGTTAAGAGATTGGGTGAAGTTACGATTTCCAACTATTTCTTGACTATGATATTGATACTTAATGTAGCTTTGTTTGTCATTAGCAAATTGCAATAGAATTTGTAGTTACCGTTATCTATTAATTACCATATCCTGAAGCCTGAAGGTCACCCACAGGATGATGTTTCTCAAGGAGAAATGTCTAGTTTGCTTGGTTACTTTGACTTTCCATTTTCAATTAAAGAAGTATACAACTTCAGTTCCATTGTTTGAGATTTGGTTTAGGCCAATTTGGATGGCTCCCTGTTTACCTTTCCTGATTTTTTTCTGGACCGTCCCAATGTCCCTTTTTTCTGGGTTGTGCTTTCCTGGCAAGTGCACTCTTTTGCAATTCTCAGATTAAACATCATCAGAAATGAATGAAAAATGATAGATATTGAAGGAAAAAAACTAAACAAGTCTACAATCAAATGGTATGAAGAGTTAACCTCTAATCAGATATTACATAACACTGTAATAACTACCTTGGTCTAGGATTGCTCGAAAGATATACTTCTAAAAGTGTGGCTCTGCAAATCATCCATGCATCTAGCAGCATTTGGGAGCAGTGCATGTAATATAGGATGCTATAAAGCAACATTTTTAAAGTGTGAGTGGTCAAATCATTCAAACCACTTGCAGAGTTGGGAAAAGCAGTGGGTGTTAACTTAGCAATTTGTGTTCTCCACTATCCAATAACTGTTTTGTCCGGAACCTTACAAATAAAGACCTTTTCTGATATAAGTTGTGGTATAATCTTCAATTTGCTTCATCCCAGGAGGATCTATCAAAATGTTCTGCCTTTTTTTATATAATATGATGGTAACAGCAATCCGCTGAATGCAGGATTCAAGATCTGTGGGGGCCATAGCAGGTCTTGCA</genome_strand>
        <mrna_strand>CGCCGGAAAAGCTGAAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGAATTTGATATATGATTACTACAAGTAACATGGGTGATTCCTCCAAGGACGATTTCCTTCAGCTCATCAAGCGATTCGGCGCTTTTTTGACCGTGAAGATTTCTAATATCTTCCACACACTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCAAGATCTGTGGGGGCCATAGCAGGTCTTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E228016" ref_strand="+" ref_description="SGN-E228016 [cLED-2-C11]">
      <seq>aaaagctgaaagctcgattcatcggtcaccggaaactcaaccgacgaagacagctaggaggaggtggaggagccaaatttgctgaatttgatctatgattactacaagtaacatgggtgattcctccaaagacgattttcttgaggtcatcaagcgatttggcgcttttttgaccgtgaagatttctaatatgtttcacacactggattcaagatctgagggggcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="4333" stop="3526"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4033" g_stop="3829" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="205" r_length="205" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E228016" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>205</cumulative_length_of_scored_exons>
        <coverage percentage="0.907" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E228016" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4033" e_stop="3829"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGCTGAAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGAATTTGATATATGATTACTACAAGTAACATGGGTGATTCCTCCAAGGACGATTTCCTTCAGCTCATCAAGCGATTCGGCGCTTTTTTGACCGTGAAGATTTCTAATATCTTCCACACACTG</genome_strand>
        <mrna_strand>AAAAGCTGAAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAGCTAGGAGGAGGTGGAGGAGCCAAATTTGCTGAATTTGATCTATGATTACTACAAGTAACATGGGTGATTCCTCCAAAGACGATTTTCTTGAGGTCATCAAGCGATTTGGCGCTTTTTTGACCGTGAAGATTTCTAATATGTTTCACACACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E245415" ref_strand="+" ref_description="SGN-E245415 [cLEF-53-J2]">
      <seq>tcctcgaaggctgcgattcgctgtccctatttgtcaatttcatatttatttccatcaaaaacttggactacaaagtcacggtggagaccgccggaaaagctgaaagctcgattcatcggtcaccggaaactcaaccgacgaagacaactaggaggaggtggaggagccaaatttgctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="4427" stop="3649"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4127" g_stop="3949" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="179" r_length="179" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E245415" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>179</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E245415" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4127" e_stop="3949"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTCGAAGGCTGCGATTCGCTGTCCCTATTTGTCAATTTCATATTTATTTCCATCAAAAACTTGGACTACAAAGTCACGGTGGAGACCGCCGGAAAAGCTGAAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGA</genome_strand>
        <mrna_strand>TCCTCGAAGGCTGCGATTCGCTGTCCCTATTTGTCAATTTCATATTTATTTCCATCAAAAACTTGGACTACAAAGTCACGGTGGAGACCGCCGGAAAAGCTGAAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E733157" ref_strand="+" ref_description="SGN-E733157 [LB04AE06]">
      <seq>catacatcagttccattaatttagatgcttcacgagggtggcagtgacgaattccaccgccggccggacccgagcgcggacgatgtagccacccctcgggtcctaaccatcttgtcgtatgtgctcgaaaagctcgtagcaaggaatgatcaattgttattattaggccgccaggttggtcatgataatgaactcatgagcaacggggcaggcggcccacggagggtactagggaagaattttaatgcgtttcatggggttcgagcgccgaatataagtatacccaagtatttagagaggttatataagtatacgaattgtagcccgtcttgttttgtggtgggatatgtgtatattgatagattggggcataagtatccagattctctattggtttctttgaatgtgcataggctgcttgttactagtgttatggttgcttccaaaatgctcgatgatgcacactataacaatgcattctatgcccgagttggaggagtaagcaatgcggaattaaacaagttggagttggagctacttttcttgttagattttggagtaaatatgagtgcacgagttttcgaaagttattgccagtatttggagagggaaatgttgagcaatggaccaaccctcaagattgaaaagtcagctattaatagcattactactagtactgtagatgatgccactgaaatttcagtagaagacattgatcatacttcttcaccatcacaattgttagattaaatttacgtgacaacaataaattctaatgaaattattcaataaaatgtaaaagtacttgtctctatgttactctttctatattcggataaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="6695" stop="4634"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6395" g_stop="5935" g_length="461"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="461" r_length="461" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="5934" i_stop="5311" i_length="624">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5310" g_stop="4925" g_length="386"/>
          <reference_exon_boundary r_type="cDNA" r_start="462" r_stop="847" r_length="386" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E733157" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>847</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E733157" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6395" e_stop="5935"/>
          <exon e_start="5310" e_stop="4925"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAACATCAGTTCCATTAATTTAGATGCTTCACGAGGGTGGCAGTGACGAATTCCACCGCCGGCCGGACCCGAGCGCGGACGATGTAGCCACCCCTCGGGTCCTAACCATCTTGTCGTATGTGCTCGAAAAGCTCGTAGCAAGGAATGATCAATTGTTATTATTAGGCCGCCAGGTTGGTCATGATAATGAACTCATGAGCAACGGGGCAGGCGGCCCACGGAGGGTACTAGGGAAGAATTTTAATGCGTTTCATGGGGTTCGAGCGCCGAATATAAGTATACCCAAGTATTTAGAGAGGTTATATAAGTATACGAATTGTAGCCCGTCTTGTTTTGTGGTGGGATATGTGTATATTGATAGATTGGGGCATAAGTATCCAGATTCTCTATTGGTTTCTTTGAATGTGCATAGGCTGCTTGTTACTAGTGTTATGGTTGCTTCCAAAATGCTCGATGATGCGTAAGTACTTCTCTCTGCTTTCTCTAGACATGTTCGATAAATATTATTTGAATCTGTTTGAATTTATTTAACTTAATTTGAAGTATGATAATCAAGTTAATTAATATTAAGTGTGAATTCAGATATAGAATCTTTTATTTCTTATATCTTATTGTAACTTTCAAAAGATTAAATTCATTACCTAATTTTCAATCATTAATTGCTTTTGTATTCTTGTTACTTTATTTTAATATCATAGATTTAATGTCATTTTAAGAAGTGCTGTAATATAACATATATATGTATGCAACATCTTGTATAGTGTGTGTTTGGGGGAGGGGAATGTGGAGTGACTAAAGGGCTTGATATCCCTTTTTAGAACTACACAAGGTTAACTTATAAGTGCAAACTACCTATTTATTGAAATAACTTAGTAATAAAGAAATAGACTTCATGCTTTTGGTTCGGGTCGATGAAATTGTAAAATTATACGATTTATCATCGAAGGGTATAATAATACTACCCTTGGGACAATTGTGAGGAATAGTTATTTCACAACAATCATCTGATTTCTCTTCTTTTGTTTCGCCTTTTCAGAAAATATAGAGTCACTTTAATTCTTTTTGTTGTTAACATGTATTTCAGACACTATAACAATGCATTCTATGCCCGAGTTGGAGGAGTAAGCAATGCGGAATTAAACAAGTTGGAGTTGGAGCTACTTTTCTTGTTAGATTTTGGAGTAAATATGAGTGCACGAGTTTTCGAAAGTTATTGCCAGTATTTGGAGAGGGAAATGTTGAGCAATGGACCAACCCTCAAGATTGAAAAGTCAGCTATTAATAGCATTACTACTAGTACTGTAGATGATGCCACTGAAATTTCAGTAGAAGACATTGATCATACTTCTTCACCATCACAATTGTTAGATTAAATTTACGTGACAACAATAAATTCTAATGAAATTATTCAATAAAATGTAAAAGTACTTGTCTCTATGTTACTCTTTCTATATTCGTATAGCTGATCTT</genome_strand>
        <mrna_strand>CATACATCAGTTCCATTAATTTAGATGCTTCACGAGGGTGGCAGTGACGAATTCCACCGCCGGCCGGACCCGAGCGCGGACGATGTAGCCACCCCTCGGGTCCTAACCATCTTGTCGTATGTGCTCGAAAAGCTCGTAGCAAGGAATGATCAATTGTTATTATTAGGCCGCCAGGTTGGTCATGATAATGAACTCATGAGCAACGGGGCAGGCGGCCCACGGAGGGTACTAGGGAAGAATTTTAATGCGTTTCATGGGGTTCGAGCGCCGAATATAAGTATACCCAAGTATTTAGAGAGGTTATATAAGTATACGAATTGTAGCCCGTCTTGTTTTGTGGTGGGATATGTGTATATTGATAGATTGGGGCATAAGTATCCAGATTCTCTATTGGTTTCTTTGAATGTGCATAGGCTGCTTGTTACTAGTGTTATGGTTGCTTCCAAAATGCTCGATGATGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACTATAACAATGCATTCTATGCCCGAGTTGGAGGAGTAAGCAATGCGGAATTAAACAAGTTGGAGTTGGAGCTACTTTTCTTGTTAGATTTTGGAGTAAATATGAGTGCACGAGTTTTCGAAAGTTATTGCCAGTATTTGGAGAGGGAAATGTTGAGCAATGGACCAACCCTCAAGATTGAAAAGTCAGCTATTAATAGCATTACTACTAGTACTGTAGATGATGCCACTGAAATTTCAGTAGAAGACATTGATCATACTTCTTCACCATCACAATTGTTAGATTAAATTTACGTGACAACAATAAATTCTAATGAAATTATTCAATAAAATGTAAAAGTACTTGTCTCTATGTTACTCTTTCTATATTCGGATAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E540370" ref_strand="+" ref_description="SGN-E540370 [TUS-60-J20](-)">
      <seq>gggtcctaaccatcttgttgtatgtgctcgaaaagctcgtagcaaggaatgatcaattgttatattaggccgccaggttggtcatgataatgaactcatgagcaacggggcaggcggcccacggagggtactagggaagaattttaatgcgtttcatggggttcgagcgccgaatataagtatacccaagtatttagagaggttatataagtatacgaattgtagcccgtcttgttttgtggtgggatatgtgtatattgatagattggggcataagtatccagattctctattggtttctttgaatgtgcataggctgcttgttactagtgttatggttgcttccaaaatgctcgatgatgcacactataacaatgcattctatgcccgagttggaggagtaagcaatgcggaattaaacaagttggagttggagctacttttcttgttagattttggagtaaatatgagtgcacgagttttcgaaagttattgccagtatttggagagggaaatgttgagcaatggaccaaccctcaagattgaaaagtcagctattaatagcattactactagtactgtagatgatgccactgaaatttcagtagaagacattgatcatacttcttcaccatcacaattgttagattaaatttacgtgacaacaataaattctaatgaaattattcaataaaatgtaaaagtaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="6598" stop="4668"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6298" g_stop="5935" g_length="364"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="363" r_length="363" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="5934" i_stop="5311" i_length="624">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5310" g_stop="4959" g_length="352"/>
          <reference_exon_boundary r_type="cDNA" r_start="364" r_stop="715" r_length="352" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E540370" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>716</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E540370" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6298" e_stop="5935"/>
          <exon e_start="5310" e_stop="4959"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGTCCTAACCATCTTGTCGTATGTGCTCGAAAAGCTCGTAGCAAGGAATGATCAATTGTTATTATTAGGCCGCCAGGTTGGTCATGATAATGAACTCATGAGCAACGGGGCAGGCGGCCCACGGAGGGTACTAGGGAAGAATTTTAATGCGTTTCATGGGGTTCGAGCGCCGAATATAAGTATACCCAAGTATTTAGAGAGGTTATATAAGTATACGAATTGTAGCCCGTCTTGTTTTGTGGTGGGATATGTGTATATTGATAGATTGGGGCATAAGTATCCAGATTCTCTATTGGTTTCTTTGAATGTGCATAGGCTGCTTGTTACTAGTGTTATGGTTGCTTCCAAAATGCTCGATGATGCGTAAGTACTTCTCTCTGCTTTCTCTAGACATGTTCGATAAATATTATTTGAATCTGTTTGAATTTATTTAACTTAATTTGAAGTATGATAATCAAGTTAATTAATATTAAGTGTGAATTCAGATATAGAATCTTTTATTTCTTATATCTTATTGTAACTTTCAAAAGATTAAATTCATTACCTAATTTTCAATCATTAATTGCTTTTGTATTCTTGTTACTTTATTTTAATATCATAGATTTAATGTCATTTTAAGAAGTGCTGTAATATAACATATATATGTATGCAACATCTTGTATAGTGTGTGTTTGGGGGAGGGGAATGTGGAGTGACTAAAGGGCTTGATATCCCTTTTTAGAACTACACAAGGTTAACTTATAAGTGCAAACTACCTATTTATTGAAATAACTTAGTAATAAAGAAATAGACTTCATGCTTTTGGTTCGGGTCGATGAAATTGTAAAATTATACGATTTATCATCGAAGGGTATAATAATACTACCCTTGGGACAATTGTGAGGAATAGTTATTTCACAACAATCATCTGATTTCTCTTCTTTTGTTTCGCCTTTTCAGAAAATATAGAGTCACTTTAATTCTTTTTGTTGTTAACATGTATTTCAGACACTATAACAATGCATTCTATGCCCGAGTTGGAGGAGTAAGCAATGCGGAATTAAACAAGTTGGAGTTGGAGCTACTTTTCTTGTTAGATTTTGGAGTAAATATGAGTGCACGAGTTTTCGAAAGTTATTGCCAGTATTTGGAGAGGGAAATGTTGAGCAATGGACCAACCCTCAAGATTGAAAAGTCAGCTATTAATAGCATTACTACTAGTACTGTAGATGATGCCACTGAAATTTCAGTAGAAGACATTGATCATACTTCTTCACCATCACAATTGTTAGATTAAATTTACGTGACAACAATAAATTCTAATGAAATTATTCAATAAAATGTAAAAGTACTTGTCTCT</genome_strand>
        <mrna_strand>GGGTCCTAACCATCTTGTTGTATGTGCTCGAAAAGCTCGTAGCAAGGAATGATCAATTGTTA-TATTAGGCCGCCAGGTTGGTCATGATAATGAACTCATGAGCAACGGGGCAGGCGGCCCACGGAGGGTACTAGGGAAGAATTTTAATGCGTTTCATGGGGTTCGAGCGCCGAATATAAGTATACCCAAGTATTTAGAGAGGTTATATAAGTATACGAATTGTAGCCCGTCTTGTTTTGTGGTGGGATATGTGTATATTGATAGATTGGGGCATAAGTATCCAGATTCTCTATTGGTTTCTTTGAATGTGCATAGGCTGCTTGTTACTAGTGTTATGGTTGCTTCCAAAATGCTCGATGATGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACTATAACAATGCATTCTATGCCCGAGTTGGAGGAGTAAGCAATGCGGAATTAAACAAGTTGGAGTTGGAGCTACTTTTCTTGTTAGATTTTGGAGTAAATATGAGTGCACGAGTTTTCGAAAGTTATTGCCAGTATTTGGAGAGGGAAATGTTGAGCAATGGACCAACCCTCAAGATTGAAAAGTCAGCTATTAATAGCATTACTACTAGTACTGTAGATGATGCCACTGAAATTTCAGTAGAAGACATTGATCATACTTCTTCACCATCACAATTGTTAGATTAAATTTACGTGACAACAATAAATTCTAATGAAATTATTCAATAAAATGTAAAAGTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E548374" ref_strand="+" ref_description="SGN-E548374 [TUS-60-J20]">
      <seq>cgaattccaccgccggccggacccgagcgcggacgatgtagccacccctcgggtcctaaccatcttgtcgtatgtgctcgaaaagctcgtagcaaggaatgatcaattgttattattaggccgccaggttggtcatgataatgaactcatgagcaacggggcaggcggcccacggagggtactagggaagaattttaatgcgtttcatggggttcgagcgccgaatataagtatacccaagtatttagagaggttatataagtatacgaattgtagcccgtcttgttttgtggtgggatatgtgtatattgatagattggggcataagtatccagattctctattggtttctttgaatgtgcataggctgcttgttactagtgttatggttgcttccaaaatgctcgatgatgcacactataacaatgcattctatgcccgagttggaggagtaagcaatgcggaattaaacaagttggagttggagctacttttcttgttagattttggagtaaatatgagtgcacgagttttcgaaagttattgccagtatttggagagggaaatgttgagcaatggaccaaccctncagattgaaaagtcagctattaatagcattactactagtactgtagatgatgccactgaaatttcagtagaagacattgatcatacttcttcaccatcacaattgttagattaaatttacgtgacaacaataaattctaatgaaattattcaataaaatgtaaaagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="6648" stop="4669"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6348" g_stop="5935" g_length="414"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="414" r_length="414" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="5934" i_stop="5311" i_length="624">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5310" g_stop="4969" g_length="342"/>
          <reference_exon_boundary r_type="cDNA" r_start="415" r_stop="756" r_length="342" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E548374" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>756</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E548374" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6348" e_stop="5935"/>
          <exon e_start="5310" e_stop="4969"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAATTCCACCGCCGGCCGGACCCGAGCGCGGACGATGTAGCCACCCCTCGGGTCCTAACCATCTTGTCGTATGTGCTCGAAAAGCTCGTAGCAAGGAATGATCAATTGTTATTATTAGGCCGCCAGGTTGGTCATGATAATGAACTCATGAGCAACGGGGCAGGCGGCCCACGGAGGGTACTAGGGAAGAATTTTAATGCGTTTCATGGGGTTCGAGCGCCGAATATAAGTATACCCAAGTATTTAGAGAGGTTATATAAGTATACGAATTGTAGCCCGTCTTGTTTTGTGGTGGGATATGTGTATATTGATAGATTGGGGCATAAGTATCCAGATTCTCTATTGGTTTCTTTGAATGTGCATAGGCTGCTTGTTACTAGTGTTATGGTTGCTTCCAAAATGCTCGATGATGCGTAAGTACTTCTCTCTGCTTTCTCTAGACATGTTCGATAAATATTATTTGAATCTGTTTGAATTTATTTAACTTAATTTGAAGTATGATAATCAAGTTAATTAATATTAAGTGTGAATTCAGATATAGAATCTTTTATTTCTTATATCTTATTGTAACTTTCAAAAGATTAAATTCATTACCTAATTTTCAATCATTAATTGCTTTTGTATTCTTGTTACTTTATTTTAATATCATAGATTTAATGTCATTTTAAGAAGTGCTGTAATATAACATATATATGTATGCAACATCTTGTATAGTGTGTGTTTGGGGGAGGGGAATGTGGAGTGACTAAAGGGCTTGATATCCCTTTTTAGAACTACACAAGGTTAACTTATAAGTGCAAACTACCTATTTATTGAAATAACTTAGTAATAAAGAAATAGACTTCATGCTTTTGGTTCGGGTCGATGAAATTGTAAAATTATACGATTTATCATCGAAGGGTATAATAATACTACCCTTGGGACAATTGTGAGGAATAGTTATTTCACAACAATCATCTGATTTCTCTTCTTTTGTTTCGCCTTTTCAGAAAATATAGAGTCACTTTAATTCTTTTTGTTGTTAACATGTATTTCAGACACTATAACAATGCATTCTATGCCCGAGTTGGAGGAGTAAGCAATGCGGAATTAAACAAGTTGGAGTTGGAGCTACTTTTCTTGTTAGATTTTGGAGTAAATATGAGTGCACGAGTTTTCGAAAGTTATTGCCAGTATTTGGAGAGGGAAATGTTGAGCAATGGACCAACCCTCAAGATTGAAAAGTCAGCTATTAATAGCATTACTACTAGTACTGTAGATGATGCCACTGAAATTTCAGTAGAAGACATTGATCATACTTCTTCACCATCACAATTGTTAGATTAAATTTACGTGACAACAATAAATTCTAATGAAATTATTCAATAAAATGTAAAAGT</genome_strand>
        <mrna_strand>CGAATTCCACCGCCGGCCGGACCCGAGCGCGGACGATGTAGCCACCCCTCGGGTCCTAACCATCTTGTCGTATGTGCTCGAAAAGCTCGTAGCAAGGAATGATCAATTGTTATTATTAGGCCGCCAGGTTGGTCATGATAATGAACTCATGAGCAACGGGGCAGGCGGCCCACGGAGGGTACTAGGGAAGAATTTTAATGCGTTTCATGGGGTTCGAGCGCCGAATATAAGTATACCCAAGTATTTAGAGAGGTTATATAAGTATACGAATTGTAGCCCGTCTTGTTTTGTGGTGGGATATGTGTATATTGATAGATTGGGGCATAAGTATCCAGATTCTCTATTGGTTTCTTTGAATGTGCATAGGCTGCTTGTTACTAGTGTTATGGTTGCTTCCAAAATGCTCGATGATGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACTATAACAATGCATTCTATGCCCGAGTTGGAGGAGTAAGCAATGCGGAATTAAACAAGTTGGAGTTGGAGCTACTTTTCTTGTTAGATTTTGGAGTAAATATGAGTGCACGAGTTTTCGAAAGTTATTGCCAGTATTTGGAGAGGGAAATGTTGAGCAATGGACCAACCCTNCAGATTGAAAAGTCAGCTATTAATAGCATTACTACTAGTACTGTAGATGATGCCACTGAAATTTCAGTAGAAGACATTGATCATACTTCTTCACCATCACAATTGTTAGATTAAATTTACGTGACAACAATAAATTCTAATGAAATTATTCAATAAAATGTAAAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E477368" ref_strand="+" ref_description="SGN-E477368 [cSTB-48-C5]">
      <seq>ggcagcgacgaattccaccgccggccggacccgatcgctgccgatgcagctacccctcgggtcctaaccatcttgtcttatgtgctcgaaaggctcgtagcacggaatgatcaattgctagtgttgggccgtcaggttgctcatgataatggactcatgagcaacggggaaggcggcccacagagcgtattaggaaagaattttaatgcgtttcatggggttcgagcaccgaatataagtataccgaagtatttggagaggttatacaagtatacgaattgtagcccgtcttgttttgtggtggggtatgtgtatattgatagattggggcataagtatccagattctctcttggtttctttgaatgtgcataggctgcttgttactagtgttatggttgcttccaaaatgctcgatgatgcacactacaacaatgcattttatgcccgagttggaggagtaagcaatgcagaattaaacaagttggagttggagctacttttcttgctagattttggagttaatgtgagtgcacgagttttcgaaagttattgccagtatttggagaaggaaatgttgagcaatggaccaaccctcaagattgaaaagtcagttattagcagtaccactagtactgttgatgatgccactgaaatttcagtagaagacactgatcata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="6656" stop="4787"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6356" g_stop="5935" g_length="422"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="422" r_length="422" r_score="0.936"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="5934" i_stop="5311" i_length="624">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5310" g_stop="5051" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="423" r_stop="679" r_length="257" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E477368" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>682</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E477368" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6356" e_stop="5935"/>
          <exon e_start="5310" e_stop="5051"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCAGTGACGAATTCCACCGCCGGCCGGACCCGAGCGCGGACGATGTAGCCACCCCTCGGGTCCTAACCATCTTGTCGTATGTGCTCGAAAAGCTCGTAGCAAGGAATGATCAATTGTTATTATTAGGCCGCCAGGTTGGTCATGATAATGAACTCATGAGCAACGGGGCAGGCGGCCCACGGAGGGTACTAGGGAAGAATTTTAATGCGTTTCATGGGGTTCGAGCGCCGAATATAAGTATACCCAAGTATTTAGAGAGGTTATATAAGTATACGAATTGTAGCCCGTCTTGTTTTGTGGTGGGATATGTGTATATTGATAGATTGGGGCATAAGTATCCAGATTCTCTATTGGTTTCTTTGAATGTGCATAGGCTGCTTGTTACTAGTGTTATGGTTGCTTCCAAAATGCTCGATGATGCGTAAGTACTTCTCTCTGCTTTCTCTAGACATGTTCGATAAATATTATTTGAATCTGTTTGAATTTATTTAACTTAATTTGAAGTATGATAATCAAGTTAATTAATATTAAGTGTGAATTCAGATATAGAATCTTTTATTTCTTATATCTTATTGTAACTTTCAAAAGATTAAATTCATTACCTAATTTTCAATCATTAATTGCTTTTGTATTCTTGTTACTTTATTTTAATATCATAGATTTAATGTCATTTTAAGAAGTGCTGTAATATAACATATATATGTATGCAACATCTTGTATAGTGTGTGTTTGGGGGAGGGGAATGTGGAGTGACTAAAGGGCTTGATATCCCTTTTTAGAACTACACAAGGTTAACTTATAAGTGCAAACTACCTATTTATTGAAATAACTTAGTAATAAAGAAATAGACTTCATGCTTTTGGTTCGGGTCGATGAAATTGTAAAATTATACGATTTATCATCGAAGGGTATAATAATACTACCCTTGGGACAATTGTGAGGAATAGTTATTTCACAACAATCATCTGATTTCTCTTCTTTTGTTTCGCCTTTTCAGAAAATATAGAGTCACTTTAATTCTTTTTGTTGTTAACATGTATTTCAGACACTATAACAATGCATTCTATGCCCGAGTTGGAGGAGTAAGCAATGCGGAATTAAACAAGTTGGAGTTGGAGCTACTTTTCTTGTTAGATTTTGGAGTAAATATGAGTGCACGAGTTTTCGAAAGTTATTGCCAGTATTTGGAGAGGGAAATGTTGAGCAATGGACCAACCCTCAAGATTGAAAAGTCAGCTATTAATAGCATTACTACTAGTACTGTAGATGATGCCACTGAAATTTCAGTAGAAGACATTGATCATA</genome_strand>
        <mrna_strand>GGCAGCGACGAATTCCACCGCCGGCCGGACCCGATCGCTGCCGATGCAGCTACCCCTCGGGTCCTAACCATCTTGTCTTATGTGCTCGAAAGGCTCGTAGCACGGAATGATCAATTGCTAGTGTTGGGCCGTCAGGTTGCTCATGATAATGGACTCATGAGCAACGGGGAAGGCGGCCCACAGAGCGTATTAGGAAAGAATTTTAATGCGTTTCATGGGGTTCGAGCACCGAATATAAGTATACCGAAGTATTTGGAGAGGTTATACAAGTATACGAATTGTAGCCCGTCTTGTTTTGTGGTGGGGTATGTGTATATTGATAGATTGGGGCATAAGTATCCAGATTCTCTCTTGGTTTCTTTGAATGTGCATAGGCTGCTTGTTACTAGTGTTATGGTTGCTTCCAAAATGCTCGATGATGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACTACAACAATGCATTTTATGCCCGAGTTGGAGGAGTAAGCAATGCAGAATTAAACAAGTTGGAGTTGGAGCTACTTTTCTTGCTAGATTTTGGAGTTAATGTGAGTGCACGAGTTTTCGAAAGTTATTGCCAGTATTTGGAGAAGGAAATGTTGAGCAATGGACCAACCCTCAAGATTGAAAAGTCAG---TTATTAGCAGTACCACTAGTACTGTTGATGATGCCACTGAAATTTCAGTAGAAGACACTGATCATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E287443" ref_strand="+" ref_description="SGN-E287443 [cLES-15-L3]">
      <seq>gaattccaccgccggccggacccgagcgcggacgatgtagccacccctcgggtcctaaccatcttgtcgtatgtgctcgaaaagctcgtagcaaggaatgatcaattgttattattaggccgccaggttggtcatgataatgaactcatgagcaacgggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="6647" stop="5888"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6347" g_stop="6188" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="160" r_length="160" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E287443" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>160</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E287443" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6347" e_stop="6188"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATTCCACCGCCGGCCGGACCCGAGCGCGGACGATGTAGCCACCCCTCGGGTCCTAACCATCTTGTCGTATGTGCTCGAAAAGCTCGTAGCAAGGAATGATCAATTGTTATTATTAGGCCGCCAGGTTGGTCATGATAATGAACTCATGAGCAACGGGG</genome_strand>
        <mrna_strand>GAATTCCACCGCCGGCCGGACCCGAGCGCGGACGATGTAGCCACCCCTCGGGTCCTAACCATCTTGTCGTATGTGCTCGAAAAGCTCGTAGCAAGGAATGATCAATTGTTATTATTAGGCCGCCAGGTTGGTCATGATAATGAACTCATGAGCAACGGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E623731" ref_strand="+" ref_description="SGN-E623731 [88827]">
      <seq>ttaaattacaaaaaattaaagatgtgtagtggaagaagagagggtgaagaagaaactacctcaatttcgtattgcaaagggccattgaaagagggagaatccataattaggtctacaatttcttgtgcgctctgtagttcaaggcctctgtttattgtgaagctgataatgcttttctttgccggaaatgcgatagatcggttcacgaagctaatttcttggctcagagacatataaggtgccttctttgcagcgtttgccggaaaacaacgtggcggtttctgatcggaacttcgtcggagctgattttgccgacgattgccggtttggaacagagaaacagaaggagaagtgcagattctgagacgatggactacagaacgacgccgcaagagcttttcctgtttatttgatatttaattatgtttagattttttttgtttaattccattattggatgatgcatttaatttaaattaattaagtgtacatactttgtatgtattacgttaattaataataaaaatatagtactaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="13964" stop="12866"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13663" g_stop="13173" g_length="491"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="486" r_length="486" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E623731" ref_strand="+">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>491</cumulative_length_of_scored_exons>
        <coverage percentage="0.903" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E623731" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13663" e_stop="13173"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAATTACAAACAAAAGTTAAAGATGTGTAGTGGAAGAAGAGAGGGTGACGAAAAAACTTCATCAACTTCATATTGCAAAGGGCCTTCGAAAGAGGGAGAATCGATAATTAGCTCTGCAATTACTTGTGCGCTCTGTAGTTCAGAGGCCTCTGTTTATTGTGAAGCTGATAATGCTTTTCTTTGCCGGAAATGTGATAGATCGGTTCACGGAGCTAATTTTTTGGCTCAGAGACATATAAGGTGCCTTCTTTGCAGCGTTTGCCGGAAAACAACGCGGCGGTTTCTGATCGGAACTTCGTCGGAGCTGATTTTGCCGACGATTGCCCGTTTGGAACAGAGAAACAGAAGCAGAAGTGCAGAGTCTGAGACGACGGACTACAGAACGACGCCGCAAGAGCTTTTTCTGTTTATTTGATATTTAATTATGTTTTGATTTTTTTTTGTTTAATTCCATTACTGGATGATGCATTTAATTTAAATTAATTAAGT</genome_strand>
        <mrna_strand>TTAAATTAC-AA-AAAA-TTAAAGATGTGTAGTGGAAGAAGAGAGGGTGAAGAAGAAACTACCTCAATTTCGTATTGCAAAGGGCCATTGAAAGAGGGAGAATCCATAATTAGGTCTACAATTTCTTGTGCGCTCTGTAGTTCA-AGGCCTCTGTTTATTGTGAAGCTGATAATGCTTTTCTTTGCCGGAAATGCGATAGATCGGTTCACGAAGCTAATTTCTTGGCTCAGAGACATATAAGGTGCCTTCTTTGCAGCGTTTGCCGGAAAACAACGTGGCGGTTTCTGATCGGAACTTCGTCGGAGCTGATTTTGCCGACGATTGCCGGTTTGGAACAGAGAAACAGAAGGAGAAGTGCAGATTCTGAGACGATGGACTACAGAACGACGCCGCAAGAGCTTTTCCTGTTTATTTGATATTTAATTATGTTTAGA-TTTTTTTTGTTTAATTCCATTATTGGATGATGCATTTAATTTAAATTAATTAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E745673" ref_strand="+" ref_description="SGN-E745673 [GI|47105197]">
      <seq>ggagaaccaaaaactgagatctgctcacaatacagttcgatttccatagttacaatcatcactatcataattttctccatgtttagttcatccaacacagtagaaatgcctatggttccaagattcattcatacacaaaatcgtctcaaagatcttctcttaatcttctccacacttgttatcttctacctcatcttccttcttcatcacatccagacccccaaaacttccttcaatccaaatcccaatttctccaaaaccctttcaacttccactaatctttcaatctcacacctcttcttctcaattgccgcttcttcttcctctttctctaaccgtctctcttacattaacctctggtacaaacccaattccacaaacgccgtcgttttccttgacgacccgatttccatttctaccctctctgtttcatcacccccaattcttgtttcatcggatacttctaagtttccttattcattcccggcgggccgtcgttcggcgattcggattgctcgtattgttaaagatacttttgatttggttaaaaatgtgaactttaatgatacccgttggtttgtttttggggatgatgatactgttttctttacggataatttggttagagttttgtcgaaatatgattgtgagaagtggtattatgttgggtataattcggagagttttgagcaaaatgagaagtattcatttgatatggcatttggagggggtgggtttgcacttagtgctccattggctaaggttttagctagggttttggattcttgtttgattaggtaccctcatttgtatggaagtgattccaggattttttcttgtgtagctgagctcggagtacatttgactcatgaacctggattccaccaggttgatgtccgaggaaatctgtttggtatccttgctgcacatccattatcacctttgttatcacttcatcacttggacgtcgtggagccactttttcctggcatgactaggattcaagcagtggaccatcttttccaagctgtccatgctgatccagctaggattttggaacaaactgtgtgctatgacaagtccaatttactgaccgtttcagttgcatggggttatgccgttcaggtgtttgaagggaatcaacttcttccagatcttctctcgctgcagcgaacatttacaccatggaaaaggggtaaaaatgtttctgcaagctatatgctcaacactagagtcaatcctagtgatccatgcaaaaaacctgatgtcttcttcttgaaaaaggtgctttctagtatagatggcgtatggactgagtatacaagacacagtgttgggaagtgtgttagaaaaaatcctacaaaaaagttggtaaatataagggtcttctcgcagaagttagacttcgatgttgaacagttgaaggcacctcgccgaccatgctgtgacatttcagcacctatcaatgagacgatgatagttggtattagacaatgtgggcatgatgagttgatctcaatgcagacttaaatgatacttaaaattgctcgacaaacggcctgtcaatccatggtttggacgagcggagggttatgcagtctcttgatagaactctctcttccgatttctgaattttataagatttatgcgattgttactcttacctcctgtattactaaggaactcttgtaggagggtgtcgtgtgttgcatctcttctggaaagagtagtaatcactcttttgaaaccttggttgctcgtcgattccatggatctcgtggcaaaagcaaggtctgtgcttataatttctctgggtgtattccgccataccacggattgaagttaatattgttgtgtttttatgaactatgattagtttaatttttgtgatttttttactggagaaagatgagcctagacaggcctcaggaaagtttagtaaggtggcatatattaattcaccagaaatgtagattaacccaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="29285" stop="34212"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29584" g_stop="30471" g_length="888"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="888" r_length="888" r_score="0.999"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30472" i_stop="31329" i_length="858">
            <donor d_prob="0.951" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31330" g_stop="31860" g_length="531"/>
          <reference_exon_boundary r_type="cDNA" r_start="889" r_stop="1419" r_length="531" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31861" i_stop="31993" i_length="133">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.863" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31994" g_stop="32215" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="1420" r_stop="1641" r_length="222" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="32216" i_stop="33564" i_length="1349">
            <donor d_prob="0.901" d_score="1.00"/>
            <acceptor a_prob="0.623" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="33565" g_stop="33906" g_length="342"/>
          <reference_exon_boundary r_type="cDNA" r_start="1642" r_stop="1983" r_length="342" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1984" polyA_stop="1996"/>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E745673" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1983</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E745673" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29584" e_stop="30471"/>
          <exon e_start="31330" e_stop="31860"/>
          <exon e_start="31994" e_stop="32215"/>
          <exon e_start="33565" e_stop="33906"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGAACCAAAAACTGAGATCTGCTCACAATACAGTTCGATTTCCATAGTTACAATCATCACTATCATAATTTTCTCCATGTTTAGTTCATCCAACACAGTAGAAATGCCTATGGTTCCAAGATTCATTCATACACAAAATCGTCTCAAAGATCTTCTCTTAATCTTCTCCACACTTGTTATCTTCTACCTCATCTTCCTTCTTCATCACATCCAGACCCCCAAAACTTCCTTCAATCCAAATCCCAATTTCTCCAAAACCCTTTCAACTTCCACTAATCTTTCAATCTCACACCTCTTCTTCTCAATTGCCGCTTCTTCTTCCTCTTTCTCTAACCGTCTCTCTTACATTAACCTCTGGTACAAACCCAATTCCACAAACGCCGTCGTTTTCCTTGACGACCCGATTTCCATTTCTACCCTCTCTGTTTCATCACCCCCAATTCTTGTTTCATCGGATACTTCTAAGTTTCCTTATTCATTCCCGGCGGGCCGTCGTTCGGCGATTCGGATTGCTCGTATTGTTAAAGATACTTTTGATTTGGTTAAAAATGTGAACTTTAATGATACCCGTTGGTTTGTTTTTGGGGATGATGATACTGTTTTCTTTACGGATAATTTGGTTAGAGTTTTGTCGAAATATGATTGTGAGAAGTGGTATTATGTTGGGTATAATTCGGAGAGTTTTGAGCAAAATGAGAAGTATTCATTTGATATGGCATTTGGAGGGGGTGGGTTTGCACTTAGTGCTCCATTGGCTAAGGTTTTAGCTAGGGTTTTGGATTCTTGTTTGATTAGGTACCCTCATTTGTATGGAAGTGATTCCAGGATTTTTTCTTGTGTAGCTGAGCTCGGAGTACATTTGACTCATGAACCTGGATTCCACCAGGTGACTTTTCGTACACTCTACCCTCTCTAGACTCCTGTTGTGGGATTAAACGGGGTATGTTGTAGTTGTTGTGTCTGGGGTTTGGATTTCATTAACAAAACTTGAACTATAAACTAATAGAACAAGATGAATTTTGAAGCTGGTTTTCATGAGATAACCTTAAGGTTCATTTGTTAGATGTATGTATTCCTAATTTAGTGAAAATATGAGGCAAATGATAAAGCATGTTAGTACTATGTGAAATTTTGTCAAGTTTGCGTATCACTGGCAAATGTTTGAACTTTTGATATCTTTTGTTGATTTGATTAGCAGCATATTGAACGATGGCCAATCTGTTTAGCATGTTATCAAAGAACATAGCTGTTTTTTTTCCGTCAATTGTAGTTCTGCAATTGTGATGATAGTTGAAATAAGGCTCGTTTTGATACAAATAGTGTTTAATGTTTTTTATGTTTATACACCCTCCATCCTAAATTATGTGACAGTTTGAGTGTGCAGGGAGTTTAAGAAAGAACAACTTTTGAAACTTGTGGTCGCAAATAAGCCATATATATTTACTATCTCATTAAGGGTAAAATGAGAATTTTATAGTTAAGTTGTTACTAAATATAGAGAAGTGTTATTCTTTTTTGGGAAAGACTAAAAAGGAAATACTATATATTGGATGAGGGAGTAGTTTGGCATGCTACCTTATTGTGAGCTTACGAGTAACCTCACTTAACCTCAAATATTTTCTTTGCTAATGGAAGTTTAATGAACTGGCCTTTTGAGGGTGCTCATGTGAGTATATAAGCTACCTAGGATGTTCTTGATTTTAGTTTTGTGTTATTAAGTCGAAATTGCTTTCATTATAAATAGGTTGATGTCCGAGGAAATCTGTTTGGTATCCTTGCTGCACATCCATTATCACCTTTGTTATCACTTCATCACTTGGACGTCGTGGAGCCACTTTTTCCTGGCATGACTAGGATTCAAGCAGTGGACCATCTTTTCCAAGCTGTCCATGCTGATCCAGCTAGGATTTTGGAACAAACTGTGTGCTATGACAAGTCCAATTTACTGACCGTTTCAGTTGCATGGGGTTATGCCGTTCAGGTGTTTGAAGGGAATCAACTTCTTCCAGATCTTCTCTCGCTGCAGCGAACATTTACACCATGGAAAAGGGGTAAAAATGTTTCTGCAAGCTATATGCTCAACACTAGAGTCAATCCTAGTGATCCATGCAAAAAACCTGATGTCTTCTTCTTGAAAAAGGTGCTTTCTAGTATAGATGGCGTATGGACTGAGTATACAAGACACAGTGTTGGGAAGTGTGTTAGAAAAAATCCTACAAAAAAGTTGGTAAATATAAGGGTCTTCTCGCAGAAGTTAGACTTCGATGTTGAACAGGTACTCTGCATGCCTATGGACCCAGGACTTTTTTACCTTGTCTTGTTATTATTACTGTGCCTTTTTTTGTGGTGTATTTCTGTCTCATGCTTCTTCTGCTGAATGTCTAATTTTCCTGATTTTCCTGAATCAGTTGAAGGCACCTCGCCGACCATGCTGTGACATTTCAGCACCTATCAATGAGACGATGATAGTTGGTATTAGACAATGTGGGCATGATGAGTTGATCTCAATGCAGACTTAAATGATACTTAAAATTGCTCGACAAACGGCCTGTCAATCCATGGTTTGGACGAGCGGAGGGTTATGCAGTCTCTTGATAGAACTCTCTCTTCCGATTTCTGAATTTTATAAGGTACCCTTTCTTGTTAGAAAGACATCACATGCCTTCTTTTTTCCACCTGTTATTGATTGCTTTGGTTCACAGAAGACTCTTTCTCCCAGTGCTATTTCTAAATCATATAAGGTCTTACTCTCGTATGCAATATTATTCGCCTAGTCGCAGAAGAATGTTGGCTGGCGTTGAAACTTGAAGTTAGTAACTCATATCGTCTGGTCTCTCTTGCTACCACGGTAGCACCTAGTGTGGTCAACACCAATCGCCTTAGGGCAACAAAGCTTACACTCATTCACATTGGTTCATCTTGCTATGCCTGAGGCCTCTTGCTCTTCTTAAGTAAAAGGTGGCTGGCCATTGTCAAAACCCAGGAATCCTAGTCCTATCAAATCCAAGAAATATGGGGCTTGCATGTCATCCATATCCATGTTGTCTTCAAAGAAACATCACATCATTAGTGTGTGATAAATATTAATGCATCTCAAACTTCTATTTCAGGGAGAAGAAAGACTCTCCGAATCTGTTAAAATAAATTTCTCCTAGAGAAATGATAACTACCAGAGGCACAGAAAGGATACATGGAACTTCATTGTGTTTGAGAGAGACGTAAACACATGACATTAGTTCCAACTTTCTATGAAACTTTGGCCGTGTTTGATTTCTCTCTGTCAAATTATTAGTTGCAAGATCCATAAATTTTAGAATATGAGCAACGAATAAACTAATTAGCTTTTGCTGATGCATTACTATTGAGTCTCTAAAAAATTAATAACAAAAGAAAAATCGTACTTAAAAGGTTTTGTATACAGAGTGTACAAAACTGTGGAAGGAAAATTGCAAAAATTACTGGTATCAATATAGGCTTGGCACGATAATCTTGTTGTAAGTACAAGGAAGCCACTAGAATAGTTGAATGGGGGTAACATTTATCTTAGTGGTATTTCATGCTTTTCATCCTAAGTATCTTTCAACTCCTTCCTTATAAATTATCTTTAGTTTAGAAAAGACTGCATTTTAGCTCCAAGAATCTCTGAGCAAACTGTGATGTAAAGCAAACATGTATGCGGAGATCTGAAATTGATATGTGTGGAACAATTATTCATGAATTTTGCTGGCTAGTGCTGCTTTATTTAGCAGACTCGGCAAACACCATCTTGTCTATTAAAGCTTGCCATTTTTTTCTTCTTTTATTAGTATTTTTCGAATTGAATGCCTTTCAAGACTTTTGTCTTAAGGTTTGAATTTCCTGTTATTTGAATAGTTGGTATAGAGCATCACTAAAATGTTCAGCTATTGTTGCCTTTTGTGCCTATTCCCGGGGATTTGAATTCTTAGTGAAGTTCATTCTCTTCTCCTTGGCATTGCAGATTTATGCGATTGTTACTCTTACCTCCTGTATTACTAAGGAACTCTTGTAGGAGGGTGTCGTGTGTTGCATCTCTTCTGGAAAGAGTAGTAATCACTCTTTTGAAACCTTGGTTGCTCGTCGATTCCATGGATCTCGTGGCAAAAGCAAGGTCTGTGCTTATAATTTCTCTGGGTGTATTCCGCCATACCACGGATTGAAGTTAATATTGTTGTGTTTTTATGAACTATGATTAGTTTAATTTTTGTGATTTTTTTACTGGAGAAAGATGAGCCTAGACAGGCCTCAGGAAAGTTTAGTAAGGTGGCATATATTAATTCACCAGAAATGTAGATTAACCCAG</genome_strand>
        <mrna_strand>GGAGAACCAAAAACTGAGATCTGCTCACAATACAGTTCGATTTCCATAGTTACAATCATCACTATCATAATTTTCTCCATGTTTAGTTCATCCAACACAGTAGAAATGCCTATGGTTCCAAGATTCATTCATACACAAAATCGTCTCAAAGATCTTCTCTTAATCTTCTCCACACTTGTTATCTTCTACCTCATCTTCCTTCTTCATCACATCCAGACCCCCAAAACTTCCTTCAATCCAAATCCCAATTTCTCCAAAACCCTTTCAACTTCCACTAATCTTTCAATCTCACACCTCTTCTTCTCAATTGCCGCTTCTTCTTCCTCTTTCTCTAACCGTCTCTCTTACATTAACCTCTGGTACAAACCCAATTCCACAAACGCCGTCGTTTTCCTTGACGACCCGATTTCCATTTCTACCCTCTCTGTTTCATCACCCCCAATTCTTGTTTCATCGGATACTTCTAAGTTTCCTTATTCATTCCCGGCGGGCCGTCGTTCGGCGATTCGGATTGCTCGTATTGTTAAAGATACTTTTGATTTGGTTAAAAATGTGAACTTTAATGATACCCGTTGGTTTGTTTTTGGGGATGATGATACTGTTTTCTTTACGGATAATTTGGTTAGAGTTTTGTCGAAATATGATTGTGAGAAGTGGTATTATGTTGGGTATAATTCGGAGAGTTTTGAGCAAAATGAGAAGTATTCATTTGATATGGCATTTGGAGGGGGTGGGTTTGCACTTAGTGCTCCATTGGCTAAGGTTTTAGCTAGGGTTTTGGATTCTTGTTTGATTAGGTACCCTCATTTGTATGGAAGTGATTCCAGGATTTTTTCTTGTGTAGCTGAGCTCGGAGTACATTTGACTCATGAACCTGGATTCCACCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATGTCCGAGGAAATCTGTTTGGTATCCTTGCTGCACATCCATTATCACCTTTGTTATCACTTCATCACTTGGACGTCGTGGAGCCACTTTTTCCTGGCATGACTAGGATTCAAGCAGTGGACCATCTTTTCCAAGCTGTCCATGCTGATCCAGCTAGGATTTTGGAACAAACTGTGTGCTATGACAAGTCCAATTTACTGACCGTTTCAGTTGCATGGGGTTATGCCGTTCAGGTGTTTGAAGGGAATCAACTTCTTCCAGATCTTCTCTCGCTGCAGCGAACATTTACACCATGGAAAAGGGGTAAAAATGTTTCTGCAAGCTATATGCTCAACACTAGAGTCAATCCTAGTGATCCATGCAAAAAACCTGATGTCTTCTTCTTGAAAAAGGTGCTTTCTAGTATAGATGGCGTATGGACTGAGTATACAAGACACAGTGTTGGGAAGTGTGTTAGAAAAAATCCTACAAAAAAGTTGGTAAATATAAGGGTCTTCTCGCAGAAGTTAGACTTCGATGTTGAACAG.....................................................................................................................................TTGAAGGCACCTCGCCGACCATGCTGTGACATTTCAGCACCTATCAATGAGACGATGATAGTTGGTATTAGACAATGTGGGCATGATGAGTTGATCTCAATGCAGACTTAAATGATACTTAAAATTGCTCGACAAACGGCCTGTCAATCCATGGTTTGGACGAGCGGAGGGTTATGCAGTCTCTTGATAGAACTCTCTCTTCCGATTTCTGAATTTTATAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTATGCGATTGTTACTCTTACCTCCTGTATTACTAAGGAACTCTTGTAGGAGGGTGTCGTGTGTTGCATCTCTTCTGGAAAGAGTAGTAATCACTCTTTTGAAACCTTGGTTGCTCGTCGATTCCATGGATCTCGTGGCAAAAGCAAGGTCTGTGCTTATAATTTCTCTGGGTGTATTCCGCCATACCACGGATTGAAGTTAATATTGTTGTGTTTTTATGAACTATGATTAGTTTAATTTTTGTGATTTTTTTACTGGAGAAAGATGAGCCTAGACAGGCCTCAGGAAAGTTTAGTAAGGTGGCATATATTAATTCACCAGAAATGTAGATTAACCCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E481347" ref_strand="+" ref_description="SGN-E481347 [cSTD-17-J20]">
      <seq>caaaaatctgagatcttctccaatacagttcgatttccatagtttcagtcatcactatcttagtttttttccatgttcagttcatccaacactgtagaaatgcctatggttccaagattcattcatacacaaaatcgcctcaaagatcttctcttaatcttctccacacttgttatcttctacctcatcttccttcttcatcacatccatacccccaaaacttccttcaatccaaatcccaatttctccaaaaccccttcaattcccactaatctttcaatctcacacctcttcttctcaattgccgcttcttcttcttctttctctaaccgtctctcttacattaacctctggtacaaacccaattccacaaacgccgttgttttccttgacgacccgatttccatttctaccctctctgtttcatctcccccaattcttgtttcatcggatacttccaagtttccttattctttcccggctggtcgtcgttcggcgattcggattgctcgtattgttaaagatacttttgatttggttaaaaatgtgaactttaatgatacccgttggtttgtttttggtgatgatgatactgttttctttacggataatttggttagagttttgtcaaaatatgattgtgagaagtggtattatgttggttataattcagagagttttgagcaaatgagaagtattcgtttgatatggcattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="29291" stop="30606"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29590" g_stop="30306" g_length="717"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="716" r_length="716" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E481347" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>717</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E481347" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29590" e_stop="30306"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAAAACTGAGATCTGCTCACAATACAGTTCGATTTCCATAGTTACAATCATCACTATCATA-ATTTTCTCCATGTTTAGTTCATCCAACACAGTAGAAATGCCTATGGTTCCAAGATTCATTCATACACAAAATCGTCTCAAAGATCTTCTCTTAATCTTCTCCACACTTGTTATCTTCTACCTCATCTTCCTTCTTCATCACATCCAGACCCCCAAAACTTCCTTCAATCCAAATCCCAATTTCTCCAAAACCCTTTCAACTTCCACTAATCTTTCAATCTCACACCTCTTCTTCTCAATTGCCGCTTCTTCTTCCTCTTTCTCTAACCGTCTCTCTTACATTAACCTCTGGTACAAACCCAATTCCACAAACGCCGTCGTTTTCCTTGACGACCCGATTTCCATTTCTACCCTCTCTGTTTCATCACCCCCAATTCTTGTTTCATCGGATACTTCTAAGTTTCCTTATTCATTCCCGGCGGGCCGTCGTTCGGCGATTCGGATTGCTCGTATTGTTAAAGATACTTTTGATTTGGTTAAAAATGTGAACTTTAATGATACCCGTTGGTTTGTTTTTGGGGATGATGATACTGTTTTCTTTACGGATAATTTGGTTAGAGTTTTGTCGAAATATGATTGTGAGAAGTGGTATTATGTTGGGTATAATTCGGAGAGTTTTGAGCAAAATGAGAAGTATTCATTTGATATGGCATTT</genome_strand>
        <mrna_strand>CAAAAATCTGAGATCTTCTC-CAATACAGTTCGATTTCCATAGTTTCAGTCATCACTATCTTAGTTTTTTTCCATGTTCAGTTCATCCAACACTGTAGAAATGCCTATGGTTCCAAGATTCATTCATACACAAAATCGCCTCAAAGATCTTCTCTTAATCTTCTCCACACTTGTTATCTTCTACCTCATCTTCCTTCTTCATCACATCCATACCCCCAAAACTTCCTTCAATCCAAATCCCAATTTCTCCAAAACCCCTTCAATTCCCACTAATCTTTCAATCTCACACCTCTTCTTCTCAATTGCCGCTTCTTCTTCTTCTTTCTCTAACCGTCTCTCTTACATTAACCTCTGGTACAAACCCAATTCCACAAACGCCGTTGTTTTCCTTGACGACCCGATTTCCATTTCTACCCTCTCTGTTTCATCTCCCCCAATTCTTGTTTCATCGGATACTTCCAAGTTTCCTTATTCTTTCCCGGCTGGTCGTCGTTCGGCGATTCGGATTGCTCGTATTGTTAAAGATACTTTTGATTTGGTTAAAAATGTGAACTTTAATGATACCCGTTGGTTTGTTTTTGGTGATGATGATACTGTTTTCTTTACGGATAATTTGGTTAGAGTTTTGTCAAAATATGATTGTGAGAAGTGGTATTATGTTGGTTATAATTCAGAGAGTTTTGAGC-AAATGAGAAGTATTCGTTTGATATGGCATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E428891" ref_strand="+" ref_description="SGN-E428891 [STM-51-I1]">
      <seq>caaaaatctgagatcttctcacaatacagttcgatttccatagtttcagtcatcactatcttagtttttttccatgttcagttcatccaacactgtagaaatgcctatggttccaagattcattcatacacaaaatcgcctcaaagatcttctcttaatcttctccacacttgttatcttctacctcatcttccttcttcatcacatccatacccccaaaacttccttcaatccaaatcccaatttctccaaaaccccttcaattcccactaatctttcaatctcacacctcttcttctcaattgccgcttcttcttcttctttctctaaccgtctctcttacattaacctctggtacaaacccaattccacaaacgccgttgttttccttgacgacccgatttccatttctaccctctctgtttcatctcccccaattcttgtttcatcggatacttccaagtttccttattctttcccggctggtcgtcgttcggcgattcggattgctcgtattgttaaagatacttttgatttggttaaaaatgtgaactttaatgatacccgttggttttgtttttggtgatgatgatactgttttctttac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="29291" stop="30494"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29590" g_stop="30194" g_length="605"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="607" r_length="607" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E428891" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>605</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E428891" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29590" e_stop="30194"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAAAACTGAGATCTGCTCACAATACAGTTCGATTTCCATAGTTACAATCATCACTATCATA-ATTTTCTCCATGTTTAGTTCATCCAACACAGTAGAAATGCCTATGGTTCCAAGATTCATTCATACACAAAATCGTCTCAAAGATCTTCTCTTAATCTTCTCCACACTTGTTATCTTCTACCTCATCTTCCTTCTTCATCACATCCAGACCCCCAAAACTTCCTTCAATCCAAATCCCAATTTCTCCAAAACCCTTTCAACTTCCACTAATCTTTCAATCTCACACCTCTTCTTCTCAATTGCCGCTTCTTCTTCCTCTTTCTCTAACCGTCTCTCTTACATTAACCTCTGGTACAAACCCAATTCCACAAACGCCGTCGTTTTCCTTGACGACCCGATTTCCATTTCTACCCTCTCTGTTTCATCACCCCCAATTCTTGTTTCATCGGATACTTCTAAGTTTCCTTATTCATTCCCGGCGGGCCGTCGTTCGGCGATTCGGATTGCTCGTATTGTTAAAGATACTTTTGATTTGGTTAAAAATGTGAACTTTAATGATACCCGTTGG-TTTGTTTTTGGGGATGATGATACTGTTTTCTTTAC</genome_strand>
        <mrna_strand>CAAAAATCTGAGATCTTCTCACAATACAGTTCGATTTCCATAGTTTCAGTCATCACTATCTTAGTTTTTTTCCATGTTCAGTTCATCCAACACTGTAGAAATGCCTATGGTTCCAAGATTCATTCATACACAAAATCGCCTCAAAGATCTTCTCTTAATCTTCTCCACACTTGTTATCTTCTACCTCATCTTCCTTCTTCATCACATCCATACCCCCAAAACTTCCTTCAATCCAAATCCCAATTTCTCCAAAACCCCTTCAATTCCCACTAATCTTTCAATCTCACACCTCTTCTTCTCAATTGCCGCTTCTTCTTCTTCTTTCTCTAACCGTCTCTCTTACATTAACCTCTGGTACAAACCCAATTCCACAAACGCCGTTGTTTTCCTTGACGACCCGATTTCCATTTCTACCCTCTCTGTTTCATCTCCCCCAATTCTTGTTTCATCGGATACTTCCAAGTTTCCTTATTCTTTCCCGGCTGGTCGTCGTTCGGCGATTCGGATTGCTCGTATTGTTAAAGATACTTTTGATTTGGTTAAAAATGTGAACTTTAATGATACCCGTTGGTTTTGTTTTTGGTGATGATGATACTGTTTTCTTTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E317093" ref_strand="+" ref_description="SGN-E317093 [cTOA-27-H13]">
      <seq>aaatgcctatggttccaagattcattcgtacacaaaatcgtctcaaagatcttctcttaatcttctccacacttgttatcttctaactcatcttccttcttcatcacatccagacccccaaaagttccttcaatccaaatcccaatttctccaaaaccctttcaacttccactaatctttcaatctcgcacctcttcttctcgattgccgcttcttcttcctctttctctaagcggctctcttacattaacctctggtacaaacccaattccacaaacgccgtcgtattccttgacgacccgatttcaatttctacactctctgattcatcacccccaattctagtttcatcagatacttctaagtttccttattcattcccagcgggccgtcgatcggcgattcagattgctcgtattgttaaagatacttttgatttggctaaaaatgtgaactttaatgatacccgctggattgtttgtggggatgatgatactgatttcgttacggata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="29387" stop="30499"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29687" g_stop="30199" g_length="513"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="513" r_length="513" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E317093" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>513</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E317093" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29687" e_stop="30199"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATGCCTATGGTTCCAAGATTCATTCATACACAAAATCGTCTCAAAGATCTTCTCTTAATCTTCTCCACACTTGTTATCTTCTACCTCATCTTCCTTCTTCATCACATCCAGACCCCCAAAACTTCCTTCAATCCAAATCCCAATTTCTCCAAAACCCTTTCAACTTCCACTAATCTTTCAATCTCACACCTCTTCTTCTCAATTGCCGCTTCTTCTTCCTCTTTCTCTAACCGTCTCTCTTACATTAACCTCTGGTACAAACCCAATTCCACAAACGCCGTCGTTTTCCTTGACGACCCGATTTCCATTTCTACCCTCTCTGTTTCATCACCCCCAATTCTTGTTTCATCGGATACTTCTAAGTTTCCTTATTCATTCCCGGCGGGCCGTCGTTCGGCGATTCGGATTGCTCGTATTGTTAAAGATACTTTTGATTTGGTTAAAAATGTGAACTTTAATGATACCCGTTGGTTTGTTTTTGGGGATGATGATACTGTTTTCTTTACGGATA</genome_strand>
        <mrna_strand>AAATGCCTATGGTTCCAAGATTCATTCGTACACAAAATCGTCTCAAAGATCTTCTCTTAATCTTCTCCACACTTGTTATCTTCTAACTCATCTTCCTTCTTCATCACATCCAGACCCCCAAAAGTTCCTTCAATCCAAATCCCAATTTCTCCAAAACCCTTTCAACTTCCACTAATCTTTCAATCTCGCACCTCTTCTTCTCGATTGCCGCTTCTTCTTCCTCTTTCTCTAAGCGGCTCTCTTACATTAACCTCTGGTACAAACCCAATTCCACAAACGCCGTCGTATTCCTTGACGACCCGATTTCAATTTCTACACTCTCTGATTCATCACCCCCAATTCTAGTTTCATCAGATACTTCTAAGTTTCCTTATTCATTCCCAGCGGGCCGTCGATCGGCGATTCAGATTGCTCGTATTGTTAAAGATACTTTTGATTTGGCTAAAAATGTGAACTTTAATGATACCCGCTGGATTGTTTGTGGGGATGATGATACTGATTTCGTTACGGATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E341575" ref_strand="+" ref_description="SGN-E341575 [cTOE-23-P23]">
      <seq>tacacaaaatcgtcttaaagatcttctcttaatcttctccacactggttatcttctacctcatcttccttcttcatcacatccagacccccaaaacttccttcaatccaaatcccaatttctccaaaaccctttcaacttccactaatctttcaatctcacacctcttcttctcaattgccgcttcttcttcctctttctctaaccgtctctcttacattaacctctggtacaaacccaattccacaaacgccgtcgttttccttgacgacccgatttccatttctaccctctctgtttcatcacccccaattcttgtttcatcggatacttctaagtttccttattcattcccggcgggccgtcgttcggcgattcggattgctcgtattgttaaagatacttttgatttgggtaaaaatgtgaactttaatgatacccgttggtttgtttttggggatgatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="29415" stop="30479"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29715" g_stop="30179" g_length="465"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="465" r_length="465" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E341575" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>465</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E341575" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29715" e_stop="30179"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACACAAAATCGTCTCAAAGATCTTCTCTTAATCTTCTCCACACTTGTTATCTTCTACCTCATCTTCCTTCTTCATCACATCCAGACCCCCAAAACTTCCTTCAATCCAAATCCCAATTTCTCCAAAACCCTTTCAACTTCCACTAATCTTTCAATCTCACACCTCTTCTTCTCAATTGCCGCTTCTTCTTCCTCTTTCTCTAACCGTCTCTCTTACATTAACCTCTGGTACAAACCCAATTCCACAAACGCCGTCGTTTTCCTTGACGACCCGATTTCCATTTCTACCCTCTCTGTTTCATCACCCCCAATTCTTGTTTCATCGGATACTTCTAAGTTTCCTTATTCATTCCCGGCGGGCCGTCGTTCGGCGATTCGGATTGCTCGTATTGTTAAAGATACTTTTGATTTGGTTAAAAATGTGAACTTTAATGATACCCGTTGGTTTGTTTTTGGGGATGATGA</genome_strand>
        <mrna_strand>TACACAAAATCGTCTTAAAGATCTTCTCTTAATCTTCTCCACACTGGTTATCTTCTACCTCATCTTCCTTCTTCATCACATCCAGACCCCCAAAACTTCCTTCAATCCAAATCCCAATTTCTCCAAAACCCTTTCAACTTCCACTAATCTTTCAATCTCACACCTCTTCTTCTCAATTGCCGCTTCTTCTTCCTCTTTCTCTAACCGTCTCTCTTACATTAACCTCTGGTACAAACCCAATTCCACAAACGCCGTCGTTTTCCTTGACGACCCGATTTCCATTTCTACCCTCTCTGTTTCATCACCCCCAATTCTTGTTTCATCGGATACTTCTAAGTTTCCTTATTCATTCCCGGCGGGCCGTCGTTCGGCGATTCGGATTGCTCGTATTGTTAAAGATACTTTTGATTTGGGTAAAAATGTGAACTTTAATGATACCCGTTGGTTTGTTTTTGGGGATGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E341639" ref_strand="+" ref_description="SGN-E341639 [cTOE-23-D19]">
      <seq>gatgatgatactgttttctttacggataatttggttagagttttgtcgaaatatgattgtgagaagtggtattatgttgggtataattcggagagttttgagcaaaatgagaagtattcatttgatatggcatttggagggggtgggtttgcacttagtgctccattggctaaggttttagctagggttttggattcttgtttgattaggtaccctcatttgtatggaagtgattccaggattttttcttgtgtagctgagctcggagtacatttgactcatgaacctggattccaccaggttgatgtccgaggaaatctgtttggtatccttgctgcacatccattatcacctttgttatcacttcatcacttggacgtcgtggagccactttttcctggcatgactaggattcaagcagtggaccatctttttcaagctgtccatgctgatccagctaggattttggaacaaactgtgtgctatgacaagttcaatttactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="29872" stop="31833"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30172" g_stop="30471" g_length="300"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="300" r_length="300" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30472" i_stop="31329" i_length="858">
            <donor d_prob="0.951" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31330" g_stop="31533" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="504" r_length="204" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E341639" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>504</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E341639" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30172" e_stop="30471"/>
          <exon e_start="31330" e_stop="31533"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGATGATACTGTTTTCTTTACGGATAATTTGGTTAGAGTTTTGTCGAAATATGATTGTGAGAAGTGGTATTATGTTGGGTATAATTCGGAGAGTTTTGAGCAAAATGAGAAGTATTCATTTGATATGGCATTTGGAGGGGGTGGGTTTGCACTTAGTGCTCCATTGGCTAAGGTTTTAGCTAGGGTTTTGGATTCTTGTTTGATTAGGTACCCTCATTTGTATGGAAGTGATTCCAGGATTTTTTCTTGTGTAGCTGAGCTCGGAGTACATTTGACTCATGAACCTGGATTCCACCAGGTGACTTTTCGTACACTCTACCCTCTCTAGACTCCTGTTGTGGGATTAAACGGGGTATGTTGTAGTTGTTGTGTCTGGGGTTTGGATTTCATTAACAAAACTTGAACTATAAACTAATAGAACAAGATGAATTTTGAAGCTGGTTTTCATGAGATAACCTTAAGGTTCATTTGTTAGATGTATGTATTCCTAATTTAGTGAAAATATGAGGCAAATGATAAAGCATGTTAGTACTATGTGAAATTTTGTCAAGTTTGCGTATCACTGGCAAATGTTTGAACTTTTGATATCTTTTGTTGATTTGATTAGCAGCATATTGAACGATGGCCAATCTGTTTAGCATGTTATCAAAGAACATAGCTGTTTTTTTTCCGTCAATTGTAGTTCTGCAATTGTGATGATAGTTGAAATAAGGCTCGTTTTGATACAAATAGTGTTTAATGTTTTTTATGTTTATACACCCTCCATCCTAAATTATGTGACAGTTTGAGTGTGCAGGGAGTTTAAGAAAGAACAACTTTTGAAACTTGTGGTCGCAAATAAGCCATATATATTTACTATCTCATTAAGGGTAAAATGAGAATTTTATAGTTAAGTTGTTACTAAATATAGAGAAGTGTTATTCTTTTTTGGGAAAGACTAAAAAGGAAATACTATATATTGGATGAGGGAGTAGTTTGGCATGCTACCTTATTGTGAGCTTACGAGTAACCTCACTTAACCTCAAATATTTTCTTTGCTAATGGAAGTTTAATGAACTGGCCTTTTGAGGGTGCTCATGTGAGTATATAAGCTACCTAGGATGTTCTTGATTTTAGTTTTGTGTTATTAAGTCGAAATTGCTTTCATTATAAATAGGTTGATGTCCGAGGAAATCTGTTTGGTATCCTTGCTGCACATCCATTATCACCTTTGTTATCACTTCATCACTTGGACGTCGTGGAGCCACTTTTTCCTGGCATGACTAGGATTCAAGCAGTGGACCATCTTTTCCAAGCTGTCCATGCTGATCCAGCTAGGATTTTGGAACAAACTGTGTGCTATGACAAGTCCAATTTACTG</genome_strand>
        <mrna_strand>GATGATGATACTGTTTTCTTTACGGATAATTTGGTTAGAGTTTTGTCGAAATATGATTGTGAGAAGTGGTATTATGTTGGGTATAATTCGGAGAGTTTTGAGCAAAATGAGAAGTATTCATTTGATATGGCATTTGGAGGGGGTGGGTTTGCACTTAGTGCTCCATTGGCTAAGGTTTTAGCTAGGGTTTTGGATTCTTGTTTGATTAGGTACCCTCATTTGTATGGAAGTGATTCCAGGATTTTTTCTTGTGTAGCTGAGCTCGGAGTACATTTGACTCATGAACCTGGATTCCACCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATGTCCGAGGAAATCTGTTTGGTATCCTTGCTGCACATCCATTATCACCTTTGTTATCACTTCATCACTTGGACGTCGTGGAGCCACTTTTTCCTGGCATGACTAGGATTCAAGCAGTGGACCATCTTTTTCAAGCTGTCCATGCTGATCCAGCTAGGATTTTGGAACAAACTGTGTGCTATGACAAGTTCAATTTACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E327792" ref_strand="+" ref_description="SGN-E327792 [cTOC-20-L5]">
      <seq>agaagtattcatttgatatggcatttggagggggtgggtttgcacttagtgctccattggctaaggttttagctagggttttggattcttgtttgattaggtaccctcatttgtatggaagtgattccaggattttttcttgtgtagctgagctcggagtacatttgactcatgaacctggattccaccaggttgatgtccgaggaaatctgtttggtatccttgctgcacatccattatcacctttgttatcacttcatcacttggacgtcgtggagccactttttcctggcatgactaggattcaagcagtggaccatcttttccaagctgtccatgctgatccagctaggattttggaacaaactgtgtgctatgacaagtccaatttactgaccgtttcagttgcatggggttatgccgttcaggtgtttgaagggaatcaacttcttccagatcttctctcgctgcagcgaacatttacaccatggaaaaggggtaaaaatgtttctggcagctatatgctcaacactagagtcaatcctagtgatccatgcaaaaaacctgatgtcttcttcttgaaaaagtgctttctag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="29981" stop="32036"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30281" g_stop="30471" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="191" r_length="191" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30472" i_stop="31329" i_length="858">
            <donor d_prob="0.951" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31330" g_stop="31736" g_length="407"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="597" r_length="406" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E327792" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>598</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E327792" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30281" e_stop="30471"/>
          <exon e_start="31330" e_stop="31736"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAGTATTCATTTGATATGGCATTTGGAGGGGGTGGGTTTGCACTTAGTGCTCCATTGGCTAAGGTTTTAGCTAGGGTTTTGGATTCTTGTTTGATTAGGTACCCTCATTTGTATGGAAGTGATTCCAGGATTTTTTCTTGTGTAGCTGAGCTCGGAGTACATTTGACTCATGAACCTGGATTCCACCAGGTGACTTTTCGTACACTCTACCCTCTCTAGACTCCTGTTGTGGGATTAAACGGGGTATGTTGTAGTTGTTGTGTCTGGGGTTTGGATTTCATTAACAAAACTTGAACTATAAACTAATAGAACAAGATGAATTTTGAAGCTGGTTTTCATGAGATAACCTTAAGGTTCATTTGTTAGATGTATGTATTCCTAATTTAGTGAAAATATGAGGCAAATGATAAAGCATGTTAGTACTATGTGAAATTTTGTCAAGTTTGCGTATCACTGGCAAATGTTTGAACTTTTGATATCTTTTGTTGATTTGATTAGCAGCATATTGAACGATGGCCAATCTGTTTAGCATGTTATCAAAGAACATAGCTGTTTTTTTTCCGTCAATTGTAGTTCTGCAATTGTGATGATAGTTGAAATAAGGCTCGTTTTGATACAAATAGTGTTTAATGTTTTTTATGTTTATACACCCTCCATCCTAAATTATGTGACAGTTTGAGTGTGCAGGGAGTTTAAGAAAGAACAACTTTTGAAACTTGTGGTCGCAAATAAGCCATATATATTTACTATCTCATTAAGGGTAAAATGAGAATTTTATAGTTAAGTTGTTACTAAATATAGAGAAGTGTTATTCTTTTTTGGGAAAGACTAAAAAGGAAATACTATATATTGGATGAGGGAGTAGTTTGGCATGCTACCTTATTGTGAGCTTACGAGTAACCTCACTTAACCTCAAATATTTTCTTTGCTAATGGAAGTTTAATGAACTGGCCTTTTGAGGGTGCTCATGTGAGTATATAAGCTACCTAGGATGTTCTTGATTTTAGTTTTGTGTTATTAAGTCGAAATTGCTTTCATTATAAATAGGTTGATGTCCGAGGAAATCTGTTTGGTATCCTTGCTGCACATCCATTATCACCTTTGTTATCACTTCATCACTTGGACGTCGTGGAGCCACTTTTTCCTGGCATGACTAGGATTCAAGCAGTGGACCATCTTTTCCAAGCTGTCCATGCTGATCCAGCTAGGATTTTGGAACAAACTGTGTGCTATGACAAGTCCAATTTACTGACCGTTTCAGTTGCATGGGGTTATGCCGTTCAGGTGTTTGAAGGGAATCAACTTCTTCCAGATCTTCTCTCGCTGCAGCGAACATTTACACCATGGAAAAGGGGTAAAAATGTTTCTGCAAGCTATATGCTCAACACTAGAGTCAATCCTAGTGATCCATGCAAAAAACCTGATGTCTTCTTCTTGAAAAAGGTGCTTTCTAG</genome_strand>
        <mrna_strand>AGAAGTATTCATTTGATATGGCATTTGGAGGGGGTGGGTTTGCACTTAGTGCTCCATTGGCTAAGGTTTTAGCTAGGGTTTTGGATTCTTGTTTGATTAGGTACCCTCATTTGTATGGAAGTGATTCCAGGATTTTTTCTTGTGTAGCTGAGCTCGGAGTACATTTGACTCATGAACCTGGATTCCACCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATGTCCGAGGAAATCTGTTTGGTATCCTTGCTGCACATCCATTATCACCTTTGTTATCACTTCATCACTTGGACGTCGTGGAGCCACTTTTTCCTGGCATGACTAGGATTCAAGCAGTGGACCATCTTTTCCAAGCTGTCCATGCTGATCCAGCTAGGATTTTGGAACAAACTGTGTGCTATGACAAGTCCAATTTACTGACCGTTTCAGTTGCATGGGGTTATGCCGTTCAGGTGTTTGAAGGGAATCAACTTCTTCCAGATCTTCTCTCGCTGCAGCGAACATTTACACCATGGAAAAGGGGTAAAAATGTTTCTGGCAGCTATATGCTCAACACTAGAGTCAATCCTAGTGATCCATGCAAAAAACCTGATGTCTTCTTCTTGAAAAA-GTGCTTTCTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E327391" ref_strand="+" ref_description="SGN-E327391 [cTOC-19-O15]">
      <seq>agaagtattcatttgatatggcatttggagggggtgggtttgcacttagtgctccattggctaaggttttagctagggttttggattcttgtttgattaggtaccctcatttgtatggaagtgattccaggattttttcttgtgtagctgagctcggagtacatttgactcatgaacctggattccaccaggttgatgtccgaggaaatctgattggtatccttgctgcacatccattatcacctttgttatcacttcatcagcttggacgtcgtggagccactttttcctggcatgactaggattcaagcagtggaccatcttttccaagctgtccatgctgatccagctatgattttggaactaactgtgtgctatgactagtccaatttactgaccgtttcagatgcatgggagtatgccgttcaagtgtttgaagggaatcgacttcttccagatcttctctcgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="29981" stop="31908"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30281" g_stop="30471" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="191" r_length="191" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30472" i_stop="31329" i_length="858">
            <donor d_prob="0.951" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31330" g_stop="31608" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="471" r_length="280" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E327391" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>470</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E327391" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30281" e_stop="30471"/>
          <exon e_start="31330" e_stop="31608"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAGTATTCATTTGATATGGCATTTGGAGGGGGTGGGTTTGCACTTAGTGCTCCATTGGCTAAGGTTTTAGCTAGGGTTTTGGATTCTTGTTTGATTAGGTACCCTCATTTGTATGGAAGTGATTCCAGGATTTTTTCTTGTGTAGCTGAGCTCGGAGTACATTTGACTCATGAACCTGGATTCCACCAGGTGACTTTTCGTACACTCTACCCTCTCTAGACTCCTGTTGTGGGATTAAACGGGGTATGTTGTAGTTGTTGTGTCTGGGGTTTGGATTTCATTAACAAAACTTGAACTATAAACTAATAGAACAAGATGAATTTTGAAGCTGGTTTTCATGAGATAACCTTAAGGTTCATTTGTTAGATGTATGTATTCCTAATTTAGTGAAAATATGAGGCAAATGATAAAGCATGTTAGTACTATGTGAAATTTTGTCAAGTTTGCGTATCACTGGCAAATGTTTGAACTTTTGATATCTTTTGTTGATTTGATTAGCAGCATATTGAACGATGGCCAATCTGTTTAGCATGTTATCAAAGAACATAGCTGTTTTTTTTCCGTCAATTGTAGTTCTGCAATTGTGATGATAGTTGAAATAAGGCTCGTTTTGATACAAATAGTGTTTAATGTTTTTTATGTTTATACACCCTCCATCCTAAATTATGTGACAGTTTGAGTGTGCAGGGAGTTTAAGAAAGAACAACTTTTGAAACTTGTGGTCGCAAATAAGCCATATATATTTACTATCTCATTAAGGGTAAAATGAGAATTTTATAGTTAAGTTGTTACTAAATATAGAGAAGTGTTATTCTTTTTTGGGAAAGACTAAAAAGGAAATACTATATATTGGATGAGGGAGTAGTTTGGCATGCTACCTTATTGTGAGCTTACGAGTAACCTCACTTAACCTCAAATATTTTCTTTGCTAATGGAAGTTTAATGAACTGGCCTTTTGAGGGTGCTCATGTGAGTATATAAGCTACCTAGGATGTTCTTGATTTTAGTTTTGTGTTATTAAGTCGAAATTGCTTTCATTATAAATAGGTTGATGTCCGAGGAAATCTGTTTGGTATCCTTGCTGCACATCCATTATCACCTTTGTTATCACTTCATCA-CTTGGACGTCGTGGAGCCACTTTTTCCTGGCATGACTAGGATTCAAGCAGTGGACCATCTTTTCCAAGCTGTCCATGCTGATCCAGCTAGGATTTTGGAACAAACTGTGTGCTATGACAAGTCCAATTTACTGACCGTTTCAGTTGCATGGGGTTATGCCGTTCAGGTGTTTGAAGGGAATCAACTTCTTCCAGATCTTCTCTCGCTG</genome_strand>
        <mrna_strand>AGAAGTATTCATTTGATATGGCATTTGGAGGGGGTGGGTTTGCACTTAGTGCTCCATTGGCTAAGGTTTTAGCTAGGGTTTTGGATTCTTGTTTGATTAGGTACCCTCATTTGTATGGAAGTGATTCCAGGATTTTTTCTTGTGTAGCTGAGCTCGGAGTACATTTGACTCATGAACCTGGATTCCACCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATGTCCGAGGAAATCTGATTGGTATCCTTGCTGCACATCCATTATCACCTTTGTTATCACTTCATCAGCTTGGACGTCGTGGAGCCACTTTTTCCTGGCATGACTAGGATTCAAGCAGTGGACCATCTTTTCCAAGCTGTCCATGCTGATCCAGCTATGATTTTGGAACTAACTGTGTGCTATGACTAGTCCAATTTACTGACCGTTTCAGATGCATGGGAGTATGCCGTTCAAGTGTTTGAAGGGAATCGACTTCTTCCAGATCTTCTCTCGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E428892" ref_strand="-" ref_description="SGN-E428892 [STM-51-I1]">
      <seq>caatgagacgatgatagttggtattagacaatgtgggcatgatgagttgatctcagtgcagacttaaaatgatacttaatgttgcttgacaaacggcctgtcaatccatggtttggatgagtggggggttatgcagtctcttgacagaactctctcttccgatttctgaattttataagatttatgccattgttactctacctcccgtactattaaggaactcttgtaggaggatgtcatgtgtgttgcatctcttctggaaagagtagtaatcactcttgagaaaccttggtggctcgtcgattccatggatctctggccataagcaagttctgtgcttatagtttctttgggtgtattccgccataccacggactgaagttgatattgttatgtttttatgaactatgattagtttaattttttgatttttttactggagaaagatgagcctagacagacctcaggaaagtttagttaaggtggcatatattaattcaccagaaatgtaacttatccagatcaaactgtggtttgaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="31738" stop="34229"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32038" g_stop="32215" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="179" r_length="179" r_score="0.944"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32216" i_stop="33564" i_length="1349">
            <donor d_prob="0.901" d_score="0.98"/>
            <acceptor a_prob="0.623" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="33565" g_stop="33929" g_length="365"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="543" r_length="364" r_score="0.910"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="544" polyA_stop="561"/>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E428892" ref_strand="-">
        <total_alignment_score>0.921</total_alignment_score>
        <cumulative_length_of_scored_exons>543</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E428892" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="32038" e_stop="32215"/>
          <exon e_start="33565" e_stop="33929"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATGAGACGATGATAGTTGGTATTAGACAATGTGGGCATGATGAGTTGATCTCAATGCAGACTT-AAATGATACTTAAAATTGCTCGACAAACGGCCTGTCAATCCATGGTTTGGACGAGCGGAGGGTTATGCAGTCTCTTGATAGAACTCTCTCTTCCGATTTCTGAATTTTATAAGGTACCCTTTCTTGTTAGAAAGACATCACATGCCTTCTTTTTTCCACCTGTTATTGATTGCTTTGGTTCACAGAAGACTCTTTCTCCCAGTGCTATTTCTAAATCATATAAGGTCTTACTCTCGTATGCAATATTATTCGCCTAGTCGCAGAAGAATGTTGGCTGGCGTTGAAACTTGAAGTTAGTAACTCATATCGTCTGGTCTCTCTTGCTACCACGGTAGCACCTAGTGTGGTCAACACCAATCGCCTTAGGGCAACAAAGCTTACACTCATTCACATTGGTTCATCTTGCTATGCCTGAGGCCTCTTGCTCTTCTTAAGTAAAAGGTGGCTGGCCATTGTCAAAACCCAGGAATCCTAGTCCTATCAAATCCAAGAAATATGGGGCTTGCATGTCATCCATATCCATGTTGTCTTCAAAGAAACATCACATCATTAGTGTGTGATAAATATTAATGCATCTCAAACTTCTATTTCAGGGAGAAGAAAGACTCTCCGAATCTGTTAAAATAAATTTCTCCTAGAGAAATGATAACTACCAGAGGCACAGAAAGGATACATGGAACTTCATTGTGTTTGAGAGAGACGTAAACACATGACATTAGTTCCAACTTTCTATGAAACTTTGGCCGTGTTTGATTTCTCTCTGTCAAATTATTAGTTGCAAGATCCATAAATTTTAGAATATGAGCAACGAATAAACTAATTAGCTTTTGCTGATGCATTACTATTGAGTCTCTAAAAAATTAATAACAAAAGAAAAATCGTACTTAAAAGGTTTTGTATACAGAGTGTACAAAACTGTGGAAGGAAAATTGCAAAAATTACTGGTATCAATATAGGCTTGGCACGATAATCTTGTTGTAAGTACAAGGAAGCCACTAGAATAGTTGAATGGGGGTAACATTTATCTTAGTGGTATTTCATGCTTTTCATCCTAAGTATCTTTCAACTCCTTCCTTATAAATTATCTTTAGTTTAGAAAAGACTGCATTTTAGCTCCAAGAATCTCTGAGCAAACTGTGATGTAAAGCAAACATGTATGCGGAGATCTGAAATTGATATGTGTGGAACAATTATTCATGAATTTTGCTGGCTAGTGCTGCTTTATTTAGCAGACTCGGCAAACACCATCTTGTCTATTAAAGCTTGCCATTTTTTTCTTCTTTTATTAGTATTTTTCGAATTGAATGCCTTTCAAGACTTTTGTCTTAAGGTTTGAATTTCCTGTTATTTGAATAGTTGGTATAGAGCATCACTAAAATGTTCAGCTATTGTTGCCTTTTGTGCCTATTCCCGGGGATTTGAATTCTTAGTGAAGTTCATTCTCTTCTCCTTGGCATTGCAGATTTATGCGATTGTTACTCTTACCTCCTGTATTACTAAGGAACTCTTGTAGGAGGGTGTC--GTGTGTTGCATCTCTTCTGGAAAGAGTAGTAATCACTCTTTTGAAACCTTGGTTGCTCGTCGATTCCATGGATCTCGTGGCAAAAGCAAGGTCTGTGCTTATAATTTCTCTGGGTGTATTCCGCCATACCACGGATTGAAGTTAATATTGTTGTGTTTTTATGAACTATGATTAGTTTAATTTTTGTGATTTTTTTACTGGAGAAAGATGAGCCTAGACAGGCCTCAGGAAAGTTTAG-TAAGGTGGCATATATTAATTCACCAGAAATGTAGATTAACCCAGATCAAACTGTGGTTTTGAAAACA</genome_strand>
        <mrna_strand>CAATGAGACGATGATAGTTGGTATTAGACAATGTGGGCATGATGAGTTGATCTCAGTGCAGACTTAAAATGATACTTAATGTTGCTTGACAAACGGCCTGTCAATCCATGGTTTGGATGAGTGGGGGGTTATGCAGTCTCTTGACAGAACTCTCTCTTCCGATTTCTGAATTTTATAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTATGCCATTGTTACTC-TACCTCCCGTACTATTAAGGAACTCTTGTAGGAGGATGTCATGTGTGTTGCATCTCTTCTGGAAAGAGTAGTAATCACTCTTGAGAAACCTTGGTGGCTCGTCGATTCCATGGATCTCTGGCCATAAGCAAGTTCTGTGCTTATAGTTTCTTTGGGTGTATTCCGCCATACCACGGACTGAAGTTGATATTGTTATGTTTTTATGAACTATGATTAGTTTAATTTTT-TGATTTTTTTACTGGAGAAAGATGAGCCTAGACAGACCTCAGGAAAGTTTAGTTAAGGTGGCATATATTAATTCACCAGAAATGTA-ACTTATCCAGATCAAACTGTGG-TTTGAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E243215" ref_strand="+" ref_description="SGN-E243215 [cLEE-2-E2]">
      <seq>ttattgtagatgaccaattttttcttcgaatacgaaattaaattacaatacacacaaaaaaaatatttgaattttttttatttaaactaaggaatgaaagaaaaaaacaaaataagaataagaaactcaaattattataataaaagaagtcaaaaaataatttttgtatgaaaaaattaaaatataccttgaactttgatagaagaatcatatatatccctaaatattttttttaaaaaaaaattagaagtaacaaatataaatttaaaactaattttttaactttcgttaaatgaagggtatatgtgagccattttctaacggcaggggtatatgtgagccgtttgtataacgataagggcatatatgaaccacttttattacgagggatatatcagctctaaatgacaaagttgagaggtatatcagacccttttccctattttttaaaatttcatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="40429" stop="41466"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40729" g_stop="41171" g_length="443"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="442" r_length="442" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E243215" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>443</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E243215" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40729" e_stop="41171"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTGTAGATGACCAAATTTTTTCTTCGAATACGAAATTAAATTACAATATACACACAAAAAATAGTTTATTTTTTTTTATTTAAACTAAGGAATGAAAGAAAAAAAACAAAATAAGAATAAGAAACTCAAATAATTATAATAAAAGAAGTCAAAAAATAATTTTTGTATGAAAAAAATTAAAATATACCTTGAACTTTGATAGAAGAATCATATATACCCCTAAATAATTTTTTT-TTTAAAAA-TAGAAGTAACAAATATAAATTTAAAACTAATTTTTTAACTTCCGTTAAATGAAGGGTATATGTGAGCCATTTTGTAACGGCAGGGGTATATGTGAGCCGTTTGTATAACGATAAGGGCATATATGAGCCACTTTTATAACGAGGGGTATATCAGCTCTAAATGACAAAGTTGAGGAGTACATCAGACCCTTTTATTTA</genome_strand>
        <mrna_strand>TTATTGTAGATGACC-AATTTTTTCTTCGAATACGAAATTAAATTACAATACACACAAAAAAAATATTTGAATTTTTTTTATTTAAACTAAGGAATGAAAG-AAAAAAACAAAATAAGAATAAGAAACTCAAATTATTATAATAAAAGAAGTCAAAAAATAATTTTTGTATG-AAAAAATTAAAATATACCTTGAACTTTGATAGAAGAATCATATATATCCCTAAATATTTTTTTTAAAAAAAAATTAGAAGTAACAAATATAAATTTAAAACTAATTTTTTAACTTTCGTTAAATGAAGGGTATATGTGAGCCATTTTCTAACGGCAGGGGTATATGTGAGCCGTTTGTATAACGATAAGGGCATATATGAACCACTTTTATTACGAGGGATATATCAGCTCTAAATGACAAAGTTGAGAGGTATATCAGACCCTTTTCCCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E457642" ref_strand="+" ref_description="SGN-E457642 [cPRO-3-E12]">
      <seq>gctaaaaatgttgatgagcttggctgctatagccatgctgcttggttcagccatggcaacaaattacacagtgggaggtcctaatggtggatgggatcaatctactgatgcccaagcatgggctgcatcgaaaactttcttcgttggagataatctgattttttcatattctccaagccattctgtgctagaagtcacaaaggctagttttgagacctgccagattacagctcctattgcaatttatactggagggatgacagtaatcactctagcttctgtaggcaagagatactttatatgtggaactggtggacattgtaatgtaggaggaatgaaactcgaaatcaacactcttcctaaggctaccccacccccacccccaccatccaaaccggctactccaccaacaccaacccccaaagctccaccaccaccaactcccatgactaaacccccagttgcttcccctccctcttcatcgccatctcccaagtcttcatcagcacactcacccagaaacatacataaaatttcccctgcaatgtcaccttccaagtcctcccatgctcacagcccagccatgcctcctactggcgttccaacatccccttctgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="42026" stop="43365"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42326" g_stop="42483" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="158" r_length="158" r_score="0.956"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42484" i_stop="42568" i_length="85">
            <donor d_prob="0.392" d_score="0.94"/>
            <acceptor a_prob="0.871" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42569" g_stop="42845" g_length="277"/>
          <reference_exon_boundary r_type="cDNA" r_start="159" r_stop="435" r_length="277" r_score="0.968"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42846" i_stop="42881" i_length="36">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
          <shorter_than_min_intron_len/>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42882" g_stop="43065" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="436" r_stop="619" r_length="184" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E457642" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>619</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E457642" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42326" e_stop="42483"/>
          <exon e_start="42569" e_stop="42845"/>
          <exon e_start="42882" e_stop="43065"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTAAGAATGTTGATGAGCTTGGCTGCTATAACCATGCTGCTTGGTTCAGCCATGGCAACAAATTACACAGTGGGAAGTCCTAATGGTGGATGGGACCAATCTACTGATGTTCAAGCATGGGCTGCATCGAAAACTTTCTTCGTCGGAGATAATCTGAGTAAGCCATGTAAAAGATAGACTATCTTTTTAGAACTTGTTGGCATCCATCCATCTAATGCCTTGTTTTGTGTTTTTCTTGACAGTTTTTTCATATTCTCTGAGCCATTCTGTGCTAGAAGTCACAAAGGCTGGTTTTGAGACCTGCCAGATTACAGCTCCTATTGCAATTTATACTGGAGGGATGACAGTAATCACTCTAGCTTCTGTAGGCAAGAAATACTTTATATGTGGAACTGGTGGACATTGTAATGTAGGAGGAATGAAACTCGAAATCAACACTCTTCCCAAGGCTACCCCACCCCCACCTCCACCAGCCAAACCGGTTACTCCACCAACACCAACCCCAAAAGCTCCACCACCGTCAACTCCACCACCATCAACTCCCAAAACTCCACCACCAACTCCCATGACTAAACCCCCAGTTGCTTCCCCTCCCTCTTTATCGCCATCTCCCAAGTCTTCATCAGCACCCTCACCCAGAAACATACATAAAATTTCCCCTGCAATGTCACCTTCCAAGTCCTCCCATGCTCACAGCCCAGCCATGCCTCCTACTGCCGTTCCAACATCCCCTTCTGTT</genome_strand>
        <mrna_strand>GCTAAAAATGTTGATGAGCTTGGCTGCTATAGCCATGCTGCTTGGTTCAGCCATGGCAACAAATTACACAGTGGGAGGTCCTAATGGTGGATGGGATCAATCTACTGATGCCCAAGCATGGGCTGCATCGAAAACTTTCTTCGTTGGAGATAATCTGA.....................................................................................TTTTTTCATATTCTCCAAGCCATTCTGTGCTAGAAGTCACAAAGGCTAGTTTTGAGACCTGCCAGATTACAGCTCCTATTGCAATTTATACTGGAGGGATGACAGTAATCACTCTAGCTTCTGTAGGCAAGAGATACTTTATATGTGGAACTGGTGGACATTGTAATGTAGGAGGAATGAAACTCGAAATCAACACTCTTCCTAAGGCTACCCCACCCCCACCCCCACCATCCAAACCGGCTACTCCACCAACACCAACCCCCAAAGCTCCACCACC....................................ACCAACTCCCATGACTAAACCCCCAGTTGCTTCCCCTCCCTCTTCATCGCCATCTCCCAAGTCTTCATCAGCACACTCACCCAGAAACATACATAAAATTTCCCCTGCAATGTCACCTTCCAAGTCCTCCCATGCTCACAGCCCAGCCATGCCTCCTACTGGCGTTCCAACATCCCCTTCTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E613532" ref_strand="+" ref_description="SGN-E613532 [63308]">
      <seq>ccgtcctccagttgcttaaactgaatttgccaggtgacttgctactggaactttgttctttttgttgctcctgtgagtgctaaaggtgacaaacaactgagacaatttgctggttgtatttatatgtctagcttttatgtatgagtcagtcttgatgatttgctaaatcatgtatatgacgggtatatactcacccgaaaaacagttacgtattatgattccctagatgggactccttctgaaataattaaacttggttgtatgcacattatacactgttttagctaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="44433" stop="43546"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44133" g_stop="43846" g_length="288"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="288" r_length="288" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E613532" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>288</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E613532" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44133" e_stop="43846"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGTCCTCCAGTTGCTTAAGCTGGATTTGCCAGGTGACTTGCTACTGGAGCTTTGCTCTTTTTGTTGCTCCTGTGAGTGCTAAAAGTGACAAACAACTGAGACAATTTGCTGGTTGTATTTGTATGTCTAGCTTTTATGTATGTGTCAGTCTTGATGGTTTGCTTAATCATGTATATGGCGGGTGTATACTCACCCGAAAAACAATTATGTATTATGATTCCCTAGATGGGATTCCTTCTGAAATAATTAAACTTGGTTGTATGCACATTATACCCTGTTTTAGCTAA</genome_strand>
        <mrna_strand>CCGTCCTCCAGTTGCTTAAACTGAATTTGCCAGGTGACTTGCTACTGGAACTTTGTTCTTTTTGTTGCTCCTGTGAGTGCTAAAGGTGACAAACAACTGAGACAATTTGCTGGTTGTATTTATATGTCTAGCTTTTATGTATGAGTCAGTCTTGATGATTTGCTAAATCATGTATATGACGGGTATATACTCACCCGAAAAACAGTTACGTATTATGATTCCCTAGATGGGACTCCTTCTGAAATAATTAAACTTGGTTGTATGCACATTATACACTGTTTTAGCTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E543991" ref_strand="+" ref_description="SGN-E543991 [TUS-66-B12]">
      <seq>ctgagaaagttgcaattctaagtgatgctcaaaggatgctgattgagctgcgaactgaaacccagaagctgaaggagtcaaatgaggagctgcaagagaagataaaagaacttaaggcagagaagaatgagctccgagatgaaaagcaaaggctaaaggaagaaaaggataatttggagcagcaggttaaaagcttagcttctaaagcaggatttctctcccatccttctgccatgggagctgcatttactgcacaaggacaagttgctgcaggcaacaaattgatgcctttcattggttatcccagtgttgcgatgtggcaattcatgcaacctgctgttgttgacacatctcaagatcatgtgctccgtcctccagttgcttaagctggatttgccaggtgacttgctactggagctttgttctttttgttgctcctgtgagtgctaaaagtgacaaacaactgagacaatttgctggttgtatttgtatgtctagcttttatgtatgtgtcagtcttgatggtttgcttaatcatgtatatggcgggtgtatactcacccgaaaaacaattatgtattatgattccctagatgggattccttctgaaataattaaacttggttgtatgcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="44919" stop="43561"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44619" g_stop="44504" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="116" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="44503" i_stop="44385" i_length="119">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.679" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="44384" g_stop="43859" g_length="526"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="642" r_length="526" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E543991" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>642</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E543991" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44619" e_stop="44504"/>
          <exon e_start="44384" e_stop="43859"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGAGAAAGTTGCAATTCTAAGTGATGCTCAAAGGATGCTGATTGAGCTGCGAACTGAAACCCAGAAGCTGAAGGAGTCAAATGAGGAGCTGCAAGAGAAGATAAAAGAACTTAAGGTGTAGTTTTAATTCTAGTGCCACTGAATGTCAGCTGTACTCTCTGATCTTCCATCTGTGCTAGTTTTCTTTGGCTCTCTGTTGAGGCACTTATAAAAGAAAAACCTATGTCTATTCAGGCAGAGAAGAATGAGCTCCGAGATGAAAAGCAAAGGCTAAAGGAAGAAAAGGATAATTTGGAGCAGCAGGTTAAAAGCTTAGCTTCTAAAGCAGGATTTCTCTCCCATCCTTCTGCCATGGGAGCTGCATTTACTGCACAAGGACAAGTTGCTGCAGGCAACAAATTGATGCCTTTCATTGGTTATCCCAGTGTTGCGATGTGGCAATTCATGCAACCTGCTGTTGTTGACACATCTCAAGATCATGTGCTCCGTCCTCCAGTTGCTTAAGCTGGATTTGCCAGGTGACTTGCTACTGGAGCTTTGCTCTTTTTGTTGCTCCTGTGAGTGCTAAAAGTGACAAACAACTGAGACAATTTGCTGGTTGTATTTGTATGTCTAGCTTTTATGTATGTGTCAGTCTTGATGGTTTGCTTAATCATGTATATGGCGGGTGTATACTCACCCGAAAAACAATTATGTATTATGATTCCCTAGATGGGATTCCTTCTGAAATAATTAAACTTGGTTGTATGCACATTATACC</genome_strand>
        <mrna_strand>CTGAGAAAGTTGCAATTCTAAGTGATGCTCAAAGGATGCTGATTGAGCTGCGAACTGAAACCCAGAAGCTGAAGGAGTCAAATGAGGAGCTGCAAGAGAAGATAAAAGAACTTAAG.......................................................................................................................GCAGAGAAGAATGAGCTCCGAGATGAAAAGCAAAGGCTAAAGGAAGAAAAGGATAATTTGGAGCAGCAGGTTAAAAGCTTAGCTTCTAAAGCAGGATTTCTCTCCCATCCTTCTGCCATGGGAGCTGCATTTACTGCACAAGGACAAGTTGCTGCAGGCAACAAATTGATGCCTTTCATTGGTTATCCCAGTGTTGCGATGTGGCAATTCATGCAACCTGCTGTTGTTGACACATCTCAAGATCATGTGCTCCGTCCTCCAGTTGCTTAAGCTGGATTTGCCAGGTGACTTGCTACTGGAGCTTTGTTCTTTTTGTTGCTCCTGTGAGTGCTAAAAGTGACAAACAACTGAGACAATTTGCTGGTTGTATTTGTATGTCTAGCTTTTATGTATGTGTCAGTCTTGATGGTTTGCTTAATCATGTATATGGCGGGTGTATACTCACCCGAAAAACAATTATGTATTATGATTCCCTAGATGGGATTCCTTCTGAAATAATTAAACTTGGTTGTATGCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E543990" ref_strand="+" ref_description="SGN-E543990 [TUS-66-B12](-)">
      <seq>gagaaagttgcaattctaagtgatgctcaaagaatgctgattgagctgcgaactgaaaccccgaagctgaaggagtcaaatgaggagctgcaagagaagataaaagaacttaaggcagagaagaatgagctccgagatgaaaagcaaaggctaaaggaagaaaaggataatttggagcagcaggttaaaagcttagcttctaaagcaggatttctctcccatccttctgccatgggagctgcatttactgcacaaggacaagttgctgcaggcaacaaattgatgcctttcattggttatcccagtgttgcgatgtggcaattcatgcaacctgctgttgttgacacatctcaagatcatgtgctccgtcctccagttgcttaagctggatttgccaggtgacttgctactggagctttgttctttttgttgctcctgtgagtgctaaaagtgacaaacaactgagacaatttgctggttgtatttgtatgtctagcttttatgtatgtgtcagtcttgatggtttgcttaatcatgtatatggcgggtgtatactcacccgaaaaacaattatgtattatgattccctagatgggattccttctgaaataattaaacttggttgtatgcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="44917" stop="43561"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44617" g_stop="44504" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="114" r_length="114" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="44503" i_stop="44385" i_length="119">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.679" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="44384" g_stop="43859" g_length="526"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="640" r_length="526" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E543990" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>640</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E543990" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44617" e_stop="44504"/>
          <exon e_start="44384" e_stop="43859"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAAAGTTGCAATTCTAAGTGATGCTCAAAGGATGCTGATTGAGCTGCGAACTGAAACCCAGAAGCTGAAGGAGTCAAATGAGGAGCTGCAAGAGAAGATAAAAGAACTTAAGGTGTAGTTTTAATTCTAGTGCCACTGAATGTCAGCTGTACTCTCTGATCTTCCATCTGTGCTAGTTTTCTTTGGCTCTCTGTTGAGGCACTTATAAAAGAAAAACCTATGTCTATTCAGGCAGAGAAGAATGAGCTCCGAGATGAAAAGCAAAGGCTAAAGGAAGAAAAGGATAATTTGGAGCAGCAGGTTAAAAGCTTAGCTTCTAAAGCAGGATTTCTCTCCCATCCTTCTGCCATGGGAGCTGCATTTACTGCACAAGGACAAGTTGCTGCAGGCAACAAATTGATGCCTTTCATTGGTTATCCCAGTGTTGCGATGTGGCAATTCATGCAACCTGCTGTTGTTGACACATCTCAAGATCATGTGCTCCGTCCTCCAGTTGCTTAAGCTGGATTTGCCAGGTGACTTGCTACTGGAGCTTTGCTCTTTTTGTTGCTCCTGTGAGTGCTAAAAGTGACAAACAACTGAGACAATTTGCTGGTTGTATTTGTATGTCTAGCTTTTATGTATGTGTCAGTCTTGATGGTTTGCTTAATCATGTATATGGCGGGTGTATACTCACCCGAAAAACAATTATGTATTATGATTCCCTAGATGGGATTCCTTCTGAAATAATTAAACTTGGTTGTATGCACATTATACC</genome_strand>
        <mrna_strand>GAGAAAGTTGCAATTCTAAGTGATGCTCAAAGAATGCTGATTGAGCTGCGAACTGAAACCCCGAAGCTGAAGGAGTCAAATGAGGAGCTGCAAGAGAAGATAAAAGAACTTAAG.......................................................................................................................GCAGAGAAGAATGAGCTCCGAGATGAAAAGCAAAGGCTAAAGGAAGAAAAGGATAATTTGGAGCAGCAGGTTAAAAGCTTAGCTTCTAAAGCAGGATTTCTCTCCCATCCTTCTGCCATGGGAGCTGCATTTACTGCACAAGGACAAGTTGCTGCAGGCAACAAATTGATGCCTTTCATTGGTTATCCCAGTGTTGCGATGTGGCAATTCATGCAACCTGCTGTTGTTGACACATCTCAAGATCATGTGCTCCGTCCTCCAGTTGCTTAAGCTGGATTTGCCAGGTGACTTGCTACTGGAGCTTTGTTCTTTTTGTTGCTCCTGTGAGTGCTAAAAGTGACAAACAACTGAGACAATTTGCTGGTTGTATTTGTATGTCTAGCTTTTATGTATGTGTCAGTCTTGATGGTTTGCTTAATCATGTATATGGCGGGTGTATACTCACCCGAAAAACAATTATGTATTATGATTCCCTAGATGGGATTCCTTCTGAAATAATTAAACTTGGTTGTATGCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E542120" ref_strand="+" ref_description="SGN-E542120 [TUS-63-E7](-)">
      <seq>gatgctcaaaggatgctgattgagctgcgaactgaaacccagaagctgaaggagtcaaatgaggagctgcaagagaagataaaagaacttaaggcagagaagaatgagctccgagatgaaaagcaaaggctaaaggaagaaaaggataatttggagcagcaggttaaaagcttagcttctaaagcaggatttctctcccatccttctgccatgggagctgcatttactgcacaaggacaagttgctgcaggcaacaaattgatgcctttcattggttatcccagtgttgcgatgtggcaattcatgcaacctgctgttgttgacacatctcaagatcatgtgctccgtcctccagttgcttaagctggatttgccaggtgacttgctactggagctttgttctttttgttgctcctgtgagtgctaaaagtgacaaacaactgagacaatttgctggttgtatttgtatgtctagcttttatgtatgtgtcagtcttgatggtttgcttaatcatgtatatggcgggtgtatactcacccgaaaaacaattatgtattatgattccctagatgggattccttctgaaataattaaacttggttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="44896" stop="43574"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44596" g_stop="44504" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="93" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="44503" i_stop="44385" i_length="119">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.679" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="44384" g_stop="43874" g_length="511"/>
          <reference_exon_boundary r_type="cDNA" r_start="94" r_stop="604" r_length="511" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E542120" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>604</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E542120" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44596" e_stop="44504"/>
          <exon e_start="44384" e_stop="43874"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGCTCAAAGGATGCTGATTGAGCTGCGAACTGAAACCCAGAAGCTGAAGGAGTCAAATGAGGAGCTGCAAGAGAAGATAAAAGAACTTAAGGTGTAGTTTTAATTCTAGTGCCACTGAATGTCAGCTGTACTCTCTGATCTTCCATCTGTGCTAGTTTTCTTTGGCTCTCTGTTGAGGCACTTATAAAAGAAAAACCTATGTCTATTCAGGCAGAGAAGAATGAGCTCCGAGATGAAAAGCAAAGGCTAAAGGAAGAAAAGGATAATTTGGAGCAGCAGGTTAAAAGCTTAGCTTCTAAAGCAGGATTTCTCTCCCATCCTTCTGCCATGGGAGCTGCATTTACTGCACAAGGACAAGTTGCTGCAGGCAACAAATTGATGCCTTTCATTGGTTATCCCAGTGTTGCGATGTGGCAATTCATGCAACCTGCTGTTGTTGACACATCTCAAGATCATGTGCTCCGTCCTCCAGTTGCTTAAGCTGGATTTGCCAGGTGACTTGCTACTGGAGCTTTGCTCTTTTTGTTGCTCCTGTGAGTGCTAAAAGTGACAAACAACTGAGACAATTTGCTGGTTGTATTTGTATGTCTAGCTTTTATGTATGTGTCAGTCTTGATGGTTTGCTTAATCATGTATATGGCGGGTGTATACTCACCCGAAAAACAATTATGTATTATGATTCCCTAGATGGGATTCCTTCTGAAATAATTAAACTTGGTTG</genome_strand>
        <mrna_strand>GATGCTCAAAGGATGCTGATTGAGCTGCGAACTGAAACCCAGAAGCTGAAGGAGTCAAATGAGGAGCTGCAAGAGAAGATAAAAGAACTTAAG.......................................................................................................................GCAGAGAAGAATGAGCTCCGAGATGAAAAGCAAAGGCTAAAGGAAGAAAAGGATAATTTGGAGCAGCAGGTTAAAAGCTTAGCTTCTAAAGCAGGATTTCTCTCCCATCCTTCTGCCATGGGAGCTGCATTTACTGCACAAGGACAAGTTGCTGCAGGCAACAAATTGATGCCTTTCATTGGTTATCCCAGTGTTGCGATGTGGCAATTCATGCAACCTGCTGTTGTTGACACATCTCAAGATCATGTGCTCCGTCCTCCAGTTGCTTAAGCTGGATTTGCCAGGTGACTTGCTACTGGAGCTTTGTTCTTTTTGTTGCTCCTGTGAGTGCTAAAAGTGACAAACAACTGAGACAATTTGCTGGTTGTATTTGTATGTCTAGCTTTTATGTATGTGTCAGTCTTGATGGTTTGCTTAATCATGTATATGGCGGGTGTATACTCACCCGAAAAACAATTATGTATTATGATTCCCTAGATGGGATTCCTTCTGAAATAATTAAACTTGGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E298312" ref_strand="+" ref_description="SGN-E298312 [cLET-41-O21]">
      <seq>aaaaactgagaaagtttcaattctaagtgatgctcaaaggatgctgattgatctgcgaactgaaacccaaaagctgaaggagtcaaatgaggagctgcaagagaagataaaagaacttaaggcacagaagaatgagctccgagatgaaaagcgaaggctaaaggaagaaaaggataatttggagcatcaggttaaaagcttaacttctaaagcaggatttctctcccatccttctgccatgggagctgcatttactgcacaaggacaagttgctgcaagcaacaaattgatgcctttcattggttatcccagcgtcgcgatgtggcaattcatgcaacctgctgttgttgacacatctcaagatcatgtgctccgtcctccagttgcttaagctggatgtgccaggtgactcgctactggagctttgttctttttgttgctcctgtgagtgctaaaagtgacaaacaactgagacaattcgctggttgtatttgtatgtctagcttttatgtatgtgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="44924" stop="43687"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44624" g_stop="44504" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="121" r_length="121" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="44503" i_stop="44385" i_length="119">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.679" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="44384" g_stop="43987" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="519" r_length="398" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E298312" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E298312" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44624" e_stop="44504"/>
          <exon e_start="44384" e_stop="43987"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAACTGAGAAAGTTGCAATTCTAAGTGATGCTCAAAGGATGCTGATTGAGCTGCGAACTGAAACCCAGAAGCTGAAGGAGTCAAATGAGGAGCTGCAAGAGAAGATAAAAGAACTTAAGGTGTAGTTTTAATTCTAGTGCCACTGAATGTCAGCTGTACTCTCTGATCTTCCATCTGTGCTAGTTTTCTTTGGCTCTCTGTTGAGGCACTTATAAAAGAAAAACCTATGTCTATTCAGGCAGAGAAGAATGAGCTCCGAGATGAAAAGCAAAGGCTAAAGGAAGAAAAGGATAATTTGGAGCAGCAGGTTAAAAGCTTAGCTTCTAAAGCAGGATTTCTCTCCCATCCTTCTGCCATGGGAGCTGCATTTACTGCACAAGGACAAGTTGCTGCAGGCAACAAATTGATGCCTTTCATTGGTTATCCCAGTGTTGCGATGTGGCAATTCATGCAACCTGCTGTTGTTGACACATCTCAAGATCATGTGCTCCGTCCTCCAGTTGCTTAAGCTGGATTTGCCAGGTGACTTGCTACTGGAGCTTTGCTCTTTTTGTTGCTCCTGTGAGTGCTAAAAGTGACAAACAACTGAGACAATTTGCTGGTTGTATTTGTATGTCTAGCTTTTATGTATGTGTC</genome_strand>
        <mrna_strand>AAAAACTGAGAAAGTTTCAATTCTAAGTGATGCTCAAAGGATGCTGATTGATCTGCGAACTGAAACCCAAAAGCTGAAGGAGTCAAATGAGGAGCTGCAAGAGAAGATAAAAGAACTTAAG.......................................................................................................................GCACAGAAGAATGAGCTCCGAGATGAAAAGCGAAGGCTAAAGGAAGAAAAGGATAATTTGGAGCATCAGGTTAAAAGCTTAACTTCTAAAGCAGGATTTCTCTCCCATCCTTCTGCCATGGGAGCTGCATTTACTGCACAAGGACAAGTTGCTGCAAGCAACAAATTGATGCCTTTCATTGGTTATCCCAGCGTCGCGATGTGGCAATTCATGCAACCTGCTGTTGTTGACACATCTCAAGATCATGTGCTCCGTCCTCCAGTTGCTTAAGCTGGATGTGCCAGGTGACTCGCTACTGGAGCTTTGTTCTTTTTGTTGCTCCTGTGAGTGCTAAAAGTGACAAACAACTGAGACAATTCGCTGGTTGTATTTGTATGTCTAGCTTTTATGTATGTGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E305275" ref_strand="+" ref_description="SGN-E305275 [cLEX-15-M4]">
      <seq>tgagaaagttgcaattctaagtgatgctcaaaggatgctgattgagctgcgaactgaaacccagaagctgaaggagtcaaatgaggagctgcaagagaagataaaagaacttaaggcagagaagaatgagctccgagatgaaaagcaaaggctaaaggaagaaaaggataatttggagcagcaggttaaaagcttagcttctaaagcaggatttctctcccatccttctgccatgggagctgcatttactgcacaaagacaagttgctgcaggcaacaaattgatgcctttcattggttatcccagtgttgcgatgtggcaattcatgcaacctgctgttgttgacacatctcaagatcatgtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="44918" stop="43835"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44618" g_stop="44504" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="115" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="44503" i_stop="44385" i_length="119">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.679" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="44384" g_stop="44135" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="365" r_length="250" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E305275" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>365</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E305275" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44618" e_stop="44504"/>
          <exon e_start="44384" e_stop="44135"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGAAAGTTGCAATTCTAAGTGATGCTCAAAGGATGCTGATTGAGCTGCGAACTGAAACCCAGAAGCTGAAGGAGTCAAATGAGGAGCTGCAAGAGAAGATAAAAGAACTTAAGGTGTAGTTTTAATTCTAGTGCCACTGAATGTCAGCTGTACTCTCTGATCTTCCATCTGTGCTAGTTTTCTTTGGCTCTCTGTTGAGGCACTTATAAAAGAAAAACCTATGTCTATTCAGGCAGAGAAGAATGAGCTCCGAGATGAAAAGCAAAGGCTAAAGGAAGAAAAGGATAATTTGGAGCAGCAGGTTAAAAGCTTAGCTTCTAAAGCAGGATTTCTCTCCCATCCTTCTGCCATGGGAGCTGCATTTACTGCACAAGGACAAGTTGCTGCAGGCAACAAATTGATGCCTTTCATTGGTTATCCCAGTGTTGCGATGTGGCAATTCATGCAACCTGCTGTTGTTGACACATCTCAAGATCATGTGC</genome_strand>
        <mrna_strand>TGAGAAAGTTGCAATTCTAAGTGATGCTCAAAGGATGCTGATTGAGCTGCGAACTGAAACCCAGAAGCTGAAGGAGTCAAATGAGGAGCTGCAAGAGAAGATAAAAGAACTTAAG.......................................................................................................................GCAGAGAAGAATGAGCTCCGAGATGAAAAGCAAAGGCTAAAGGAAGAAAAGGATAATTTGGAGCAGCAGGTTAAAAGCTTAGCTTCTAAAGCAGGATTTCTCTCCCATCCTTCTGCCATGGGAGCTGCATTTACTGCACAAAGACAAGTTGCTGCAGGCAACAAATTGATGCCTTTCATTGGTTATCCCAGTGTTGCGATGTGGCAATTCATGCAACCTGCTGTTGTTGACACATCTCAAGATCATGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E572507" ref_strand="+" ref_description="SGN-E572507 [31672]">
      <seq>gcaaaagggaagggagaaattgaaaaagggaattaggtcatggaggttgattctagtgggaatcctaattggttatttgattatgagttgatgacggatattacttctgctgcatctgttaccgtcgctgattttcagtctccggctactattgatttcagctggcctgctcaaacaatctatgcttcctctaatctcattgctgaaacagattacacatttgcggattcagaagtcagtaaggaggcaagctcacgaaagaggttaaaaagtgaatggtgcagctctccgagatctaaggcatgccgagagaaattgcggagggacagactgaatgagaggttcctcgaattgagctctgtccttggatcctggaaggccaccaaaaactgagaaagttgcaattctgagtgatgctcaaaggatgctgattgagctgcgaactgaaacccagaagctgaaggagtcaaatgaggagctgcaagagaagataaaagaacttaaggcagagaagaatgagctccgtgatgaaaagcaaaggctaaaggaagaaaaggagaatttggagcagcaagttacaagcttagcttctaaaccaggatttctctcccatccttctgccatgggagcttcatttactgcacaaaggacaagtcgctgccaggcaacaaatttgattgcctttcattggttatacccagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="48380" stop="43893"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48080" g_stop="47880" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="200" r_length="200" r_score="0.965"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47879" i_stop="46830" i_length="1050">
            <donor d_prob="0.996" d_score="0.96"/>
            <acceptor a_prob="0.991" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46829" g_stop="46767" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="201" r_stop="263" r_length="63" r_score="0.937"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46766" i_stop="44828" i_length="1939">
            <donor d_prob="0.997" d_score="0.94"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44827" g_stop="44750" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="264" r_stop="341" r_length="78" r_score="0.974"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44749" i_stop="44667" i_length="83">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.657" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="44666" g_stop="44504" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="342" r_stop="505" r_length="164" r_score="0.975"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="44503" i_stop="44385" i_length="119">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.679" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="44384" g_stop="44193" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="506" r_stop="702" r_length="197" r_score="0.911"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E572507" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>697</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E572507" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48080" e_stop="47880"/>
          <exon e_start="46829" e_stop="46767"/>
          <exon e_start="44827" e_stop="44750"/>
          <exon e_start="44666" e_stop="44504"/>
          <exon e_start="44384" e_stop="44193"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAAAGGGAAGGGGGAAATTTGAAGAAGGGAATTAGGTCATGGAGGTCGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATGACGGATATTACTTCTGCTGCATCTGTTACCGTCGCTGAGTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACGATCTATGCTTCTTCTAATCTCATGTGAGTCTGCTCTTCCGCCCTTTTTTAATTCTTGTCAATTTGTTGTACAATTACTCTCATGGTCATTTTTTTTCTTTTCGAATGAGGCTTATATGGTTTGAACACGTGAAAAGGAGAGACAGTGACTTGAGTTGAAGGAGAAGTAAAGGGAGGCTGAAGAAATATTTGGAGAGGTGATTACACAAGACTTGATGCATCTTTAGATTACGAGGGGATGACCTTAGATAGGGATATGGAGGTCATGGATAGTGGTAGATGGGTTATTGGTAGTTGAGTGTTGTCTTACTTACGGAGGGATAGACTTGGTGGTAGTTTGGAGCATAGTATGTGCTTCTCCTTTCATAGCACTAGTATTAGTATTGCTTTGAATTGCTTTCCTTTCCTTTATTTGAACTGAGGATCTAGTGGAAACAATCTCTCTACCTCCACAAAGGTAGGGTAAGGTCTGCCTACACACTACTCTCTACATACTCCACTTGTGGGATTGCACTGAGATTGTTGTTGTTGTTGAATTTTAAAGAACAATAAAGAAAGTTTTATGTTAGGATTACAACTTCTCTTTTGACTTAAAACATGTGAGCTTTGTATATTAAATTCATTGAAATCGAGATGAAGGGGAAGGCGGAAGGTTGTGGTAAATTTGACACCTAGTTTCAAATAATCTTATCATAGAGTAGGAGGTAGCTTCAACAAGGAATTGTCACTTCAGCCAGTCTGTAGTTTGAAAAGTTGTTCCTTTCGAGCATAAGGAAAAAGTGCCTATCACTTTGTGTTGAGGTTATAGATTCCTCTCTAGATTACATTACTTTAAGATATAGAAAGACTGAAATTATGTTCGGTAAATATGTTTAGTAGGATTTATATCTATCAGCTTTTCCACCAAGGTTATTGTTAGTAATAACTATGAAAGACAAATGTCTAATCTTATGGGTGCGTACATGTTTAATGTCTCGAAAGGATGATGCAAAGTAGTGGGACATCAACACTTTACTGAAGCTGGTGCTTTGCTTTTACCATATCCATATTCTGATGGTCATCTATCTCTTTCAGTACTGAAACAGATTACACATTTGCGGATTCAGAAGTTAGCAAGGAGGCAAGCTCACGAAAGCGGTAAATAAATTATCCATTTCTTTTATATCATGGTTTGATAGGTTTGATGAACTCTTTTTATTACATTCTTCTTGTTTTAGAGATCTGGATCTGTTTATATATCCTATGTTCTAGTAAGGAGAAAACCTATTTGGCTATGGTTGTCCACTCTTAAATGTACTCATTTAAGAATTTTTCTTTCAAAATATGTGTATCCTACAACTATGTCACAGGCTAAAATGAAGTCTTGAATAGCCTTTCCTCCATTATTCCTAATATAACCATATCCCCCATGTATTGGGTCAAAACTGTCGTTATCTTTACCTACATGACCATTTAGATCTCCACAAATAAAAATCTGTTGGTCGTCTGGAATACCTTGAACCAAGGTGCCCATATCTTCCAAATATTTAGTTTTTGTTTCCACATCTAGTCCTATTTAGGGAGAATAGGTGGTAATGATATTCATTGTTTGATTTCACATGCAAGACTTAATGAGATAACTCAATCCTCACCACACTTTCCCTCTACAACCTTGTCTTTAACTCTTGGTTTTAGAATAATTGAAGTCCACGCTTTATTTGCGCTTTGTGTTTAAAACCCCCAACTGATCTTAGAGCTTTTTTGCTCTTTTTGCTTTTGATAACACTGCACACCACAACTCTCCTCCTTTATATGGGTTTGAGACCGGCCATTTGAGCAAAAGCTCATACAGGCTCTTCCTCCCAATCACTCCTTTCAGTTTTATGTTTGTCTATCACTGAGGAGAAGTTCGTTGATTACTCAAGAAACCTATTTTCCTTGCGAGATTCTTGGTTGTAGACTTGTAGTCTAGTAAATTTGTCAGCACAATGATATCCTGATATATCAGACAAAACAGCTGCCTAGTTTCTTTATACTTCTTCTCTTTTCCTTTTTTACGAAAAAGCTATTGTTTATTCTTGTTGCTGAGAGTAAGATAATTTATTAATGATCTCAATACTAATAATTACAAAATAGGGTTTCTATGCAGTATCTTTCATGCCCGGTTCTCTTGCTAATCATCCTACTGAACTCAGGCATGAATATCAGATAATGTGACATATCGAAAAATTTTACATTCTGTTTCCTATTTTATGGAGAACCCATTTAGAGTACCAATCTGGTGTGGATTGGTGTTTTCTTGTTTCAAGTCTGTATAAGAGTTTTACTATTATAAGTGATAATTTCCATTTGAAGGACTATCATCTCAAATTTGAACTGTCTATGTGGAAATCTCTGTTTCAGGTTTGACAATCCAATCTATCTAATTGCTAAAAGGAAATCTCAACATTTGATAGAGCTTTGTAGATATCTTCAATTAATATGCAGCCTTTCCAATAGTCAGTTATGAAAATTTAGCTTCAATATACTGCATCCTATCTATTAGTATTCTTACATCACACCTTTTTTCAATTGTCTCATTCTGTTGGCGATTCTAAGATGGACACAGCTTATTTAGTTTCCAGAGTAAAATTCCTTTCATTATGGGCTCAAAGTAAACAGATAGTTTTTAGCAACTTTAGGATGACTGTACATGTGATTCTTGTTCTTCTATATCTATGTAGATCATCAAATGAGAAATAATGAAATTCACTTTCACAATGTTGAACCTGAACAAAATTTTCTTTATTTTAGAGTTGTGTATCACATAAATTTCTCATAGGATTCCTATGGGTCATGATCATACCATTGCTAGCCATCCTTGTCTATATCCTTGTCCAGTGTCATTAGTTCCAATGAAAATATCCTTCAAAAGGTTGGCCATTAAAGTGAGTTGCTAATAGCACTCCCCTGCATCCCCAAGAAACAAGAAAATGAAAAAGAAAGTTTCTTTATTAAAACTGGTTGTTTCAGATAGCATTTTCTAAACAAAGAACAATGCTGTTTGAACTGGTATCATTCATTTCTTTCTTGTATATCTACTTAACTGTACGTACAGGTTAAAAAGTGAATGTTGCAGCTCTCCGAGATCTAAGGCATGCAGAGAGAAATTGCGGAGGGACAGACTGAATGAGAGGCATGATCTCTCCTTCTAGATCTCTTTCTTTTGACAAATTCACTTTCTTATGAATTCTCACATCCAAATCTGACATCATATAGGTTCCTCGCATTGAGCTCTGTCCTT-GATCCTGGAAGGCCACCAAAAACTGAGAAAGTTGCAATTCTAAGTGATGCTCAAAGGATGCTGATTGAGCTGCGAACTGAAACCCAGAAGCTGAAGGAGTCAAATGAGGAGCTGCAAGAGAAGATAAAAGAACTTAAGGTGTAGTTTTAATTCTAGTGCCACTGAATGTCAGCTGTACTCTCTGATCTTCCATCTGTGCTAGTTTTCTTTGGCTCTCTGTTGAGGCACTTATAAAAGAAAAACCTATGTCTATTCAGGCAGAGAAGAATGAGCTCCGAGATGAAAAGCAAAGGCTAAAGGAAGAAAAGGATAATTTGGAGCAGCAGGTTAAAAGCTTAGCTTCTAAAGCAGGATTTCTCTCCCATCCTTCTGCCATGGGAGCTGCATTTACTGCAC-AAGGACAAGTTGCTG-CAGGCAACAAA-TTGA-TGCCTTTCATTGGTTAT-CCCAGT</genome_strand>
        <mrna_strand>GCAAAAGGGAAGGGAGAAAT-TGAAAAAGGGAATTAGGTCATGGAGGTTGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATGACGGATATTACTTCTGCTGCATCTGTTACCGTCGCTGATTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACAATCTATGCTTCCTCTAATCTCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGAAACAGATTACACATTTGCGGATTCAGAAGTCAGTAAGGAGGCAAGCTCACGAAAGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAAAAGTGAATGGTGCAGCTCTCCGAGATCTAAGGCATGCCGAGAGAAATTGCGGAGGGACAGACTGAATGAGAG...................................................................................GTTCCTCGAATTGAGCTCTGTCCTTGGATCCTGGAAGGCCACCAAAAACTGAGAAAGTTGCAATTCTGAGTGATGCTCAAAGGATGCTGATTGAGCTGCGAACTGAAACCCAGAAGCTGAAGGAGTCAAATGAGGAGCTGCAAGAGAAGATAAAAGAACTTAAG.......................................................................................................................GCAGAGAAGAATGAGCTCCGTGATGAAAAGCAAAGGCTAAAGGAAGAAAAGGAGAATTTGGAGCAGCAAGTTACAAGCTTAGCTTCTAAACCAGGATTTCTCTCCCATCCTTCTGCCATGGGAGCTTCATTTACTGCACAAAGGACAAGTCGCTGCCAGGCAACAAATTTGATTGCCTTTCATTGGTTATACCCAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E542116" ref_strand="+" ref_description="SGN-E542116 [TUS-63-E3]">
      <seq>gaagaagggaattaggtcatggaggtcgattctagtgggaatcctaattggttatttgattatgagttgatgacggatattacttctgctgcatctgttaccgtcgctgagtttcagtctccggctactattgatttcagctggcctgctcaaacgatctatgcttcttctaatctcattactgaaacagattacacatttgcggattcagaagttagcaaggaggcaagctcacgaaagcggttaaaaagtgaatgttgcagctctccgagatctaaggcatgcagagagaaattgcggagggacagactgaatgagaggttcctcgcattgagctctgtccttgatcctggaaggccaccaaaaactgagaaagttgcaattctaagtgatgctcaaaggatgctgattgagctgcgaactgaaacccagaagctgaaggagtcaaatgaggagctgcaagagaagataaaagaacttaaggcagagaagaatgagctccgagatgaaaagcaaaggctaaaggaagaaaaggataatttggagcagcaggttaaaagcttagcttctaaagcaggatttctctcccatccttctgccaggggagctgcatttactgcacaagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="48358" stop="43942"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48058" g_stop="47880" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="179" r_length="179" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47879" i_stop="46830" i_length="1050">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46829" g_stop="46767" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="242" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46766" i_stop="44828" i_length="1939">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44827" g_stop="44750" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="320" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44749" i_stop="44667" i_length="83">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.657" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="44666" g_stop="44504" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="483" r_length="163" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="44503" i_stop="44385" i_length="119">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.679" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="44384" g_stop="44242" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="484" r_stop="626" r_length="143" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E542116" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>626</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E542116" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48058" e_stop="47880"/>
          <exon e_start="46829" e_stop="46767"/>
          <exon e_start="44827" e_stop="44750"/>
          <exon e_start="44666" e_stop="44504"/>
          <exon e_start="44384" e_stop="44242"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGAAGGGAATTAGGTCATGGAGGTCGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATGACGGATATTACTTCTGCTGCATCTGTTACCGTCGCTGAGTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACGATCTATGCTTCTTCTAATCTCATGTGAGTCTGCTCTTCCGCCCTTTTTTAATTCTTGTCAATTTGTTGTACAATTACTCTCATGGTCATTTTTTTTCTTTTCGAATGAGGCTTATATGGTTTGAACACGTGAAAAGGAGAGACAGTGACTTGAGTTGAAGGAGAAGTAAAGGGAGGCTGAAGAAATATTTGGAGAGGTGATTACACAAGACTTGATGCATCTTTAGATTACGAGGGGATGACCTTAGATAGGGATATGGAGGTCATGGATAGTGGTAGATGGGTTATTGGTAGTTGAGTGTTGTCTTACTTACGGAGGGATAGACTTGGTGGTAGTTTGGAGCATAGTATGTGCTTCTCCTTTCATAGCACTAGTATTAGTATTGCTTTGAATTGCTTTCCTTTCCTTTATTTGAACTGAGGATCTAGTGGAAACAATCTCTCTACCTCCACAAAGGTAGGGTAAGGTCTGCCTACACACTACTCTCTACATACTCCACTTGTGGGATTGCACTGAGATTGTTGTTGTTGTTGAATTTTAAAGAACAATAAAGAAAGTTTTATGTTAGGATTACAACTTCTCTTTTGACTTAAAACATGTGAGCTTTGTATATTAAATTCATTGAAATCGAGATGAAGGGGAAGGCGGAAGGTTGTGGTAAATTTGACACCTAGTTTCAAATAATCTTATCATAGAGTAGGAGGTAGCTTCAACAAGGAATTGTCACTTCAGCCAGTCTGTAGTTTGAAAAGTTGTTCCTTTCGAGCATAAGGAAAAAGTGCCTATCACTTTGTGTTGAGGTTATAGATTCCTCTCTAGATTACATTACTTTAAGATATAGAAAGACTGAAATTATGTTCGGTAAATATGTTTAGTAGGATTTATATCTATCAGCTTTTCCACCAAGGTTATTGTTAGTAATAACTATGAAAGACAAATGTCTAATCTTATGGGTGCGTACATGTTTAATGTCTCGAAAGGATGATGCAAAGTAGTGGGACATCAACACTTTACTGAAGCTGGTGCTTTGCTTTTACCATATCCATATTCTGATGGTCATCTATCTCTTTCAGTACTGAAACAGATTACACATTTGCGGATTCAGAAGTTAGCAAGGAGGCAAGCTCACGAAAGCGGTAAATAAATTATCCATTTCTTTTATATCATGGTTTGATAGGTTTGATGAACTCTTTTTATTACATTCTTCTTGTTTTAGAGATCTGGATCTGTTTATATATCCTATGTTCTAGTAAGGAGAAAACCTATTTGGCTATGGTTGTCCACTCTTAAATGTACTCATTTAAGAATTTTTCTTTCAAAATATGTGTATCCTACAACTATGTCACAGGCTAAAATGAAGTCTTGAATAGCCTTTCCTCCATTATTCCTAATATAACCATATCCCCCATGTATTGGGTCAAAACTGTCGTTATCTTTACCTACATGACCATTTAGATCTCCACAAATAAAAATCTGTTGGTCGTCTGGAATACCTTGAACCAAGGTGCCCATATCTTCCAAATATTTAGTTTTTGTTTCCACATCTAGTCCTATTTAGGGAGAATAGGTGGTAATGATATTCATTGTTTGATTTCACATGCAAGACTTAATGAGATAACTCAATCCTCACCACACTTTCCCTCTACAACCTTGTCTTTAACTCTTGGTTTTAGAATAATTGAAGTCCACGCTTTATTTGCGCTTTGTGTTTAAAACCCCCAACTGATCTTAGAGCTTTTTTGCTCTTTTTGCTTTTGATAACACTGCACACCACAACTCTCCTCCTTTATATGGGTTTGAGACCGGCCATTTGAGCAAAAGCTCATACAGGCTCTTCCTCCCAATCACTCCTTTCAGTTTTATGTTTGTCTATCACTGAGGAGAAGTTCGTTGATTACTCAAGAAACCTATTTTCCTTGCGAGATTCTTGGTTGTAGACTTGTAGTCTAGTAAATTTGTCAGCACAATGATATCCTGATATATCAGACAAAACAGCTGCCTAGTTTCTTTATACTTCTTCTCTTTTCCTTTTTTACGAAAAAGCTATTGTTTATTCTTGTTGCTGAGAGTAAGATAATTTATTAATGATCTCAATACTAATAATTACAAAATAGGGTTTCTATGCAGTATCTTTCATGCCCGGTTCTCTTGCTAATCATCCTACTGAACTCAGGCATGAATATCAGATAATGTGACATATCGAAAAATTTTACATTCTGTTTCCTATTTTATGGAGAACCCATTTAGAGTACCAATCTGGTGTGGATTGGTGTTTTCTTGTTTCAAGTCTGTATAAGAGTTTTACTATTATAAGTGATAATTTCCATTTGAAGGACTATCATCTCAAATTTGAACTGTCTATGTGGAAATCTCTGTTTCAGGTTTGACAATCCAATCTATCTAATTGCTAAAAGGAAATCTCAACATTTGATAGAGCTTTGTAGATATCTTCAATTAATATGCAGCCTTTCCAATAGTCAGTTATGAAAATTTAGCTTCAATATACTGCATCCTATCTATTAGTATTCTTACATCACACCTTTTTTCAATTGTCTCATTCTGTTGGCGATTCTAAGATGGACACAGCTTATTTAGTTTCCAGAGTAAAATTCCTTTCATTATGGGCTCAAAGTAAACAGATAGTTTTTAGCAACTTTAGGATGACTGTACATGTGATTCTTGTTCTTCTATATCTATGTAGATCATCAAATGAGAAATAATGAAATTCACTTTCACAATGTTGAACCTGAACAAAATTTTCTTTATTTTAGAGTTGTGTATCACATAAATTTCTCATAGGATTCCTATGGGTCATGATCATACCATTGCTAGCCATCCTTGTCTATATCCTTGTCCAGTGTCATTAGTTCCAATGAAAATATCCTTCAAAAGGTTGGCCATTAAAGTGAGTTGCTAATAGCACTCCCCTGCATCCCCAAGAAACAAGAAAATGAAAAAGAAAGTTTCTTTATTAAAACTGGTTGTTTCAGATAGCATTTTCTAAACAAAGAACAATGCTGTTTGAACTGGTATCATTCATTTCTTTCTTGTATATCTACTTAACTGTACGTACAGGTTAAAAAGTGAATGTTGCAGCTCTCCGAGATCTAAGGCATGCAGAGAGAAATTGCGGAGGGACAGACTGAATGAGAGGCATGATCTCTCCTTCTAGATCTCTTTCTTTTGACAAATTCACTTTCTTATGAATTCTCACATCCAAATCTGACATCATATAGGTTCCTCGCATTGAGCTCTGTCCTTGATCCTGGAAGGCCACCAAAAACTGAGAAAGTTGCAATTCTAAGTGATGCTCAAAGGATGCTGATTGAGCTGCGAACTGAAACCCAGAAGCTGAAGGAGTCAAATGAGGAGCTGCAAGAGAAGATAAAAGAACTTAAGGTGTAGTTTTAATTCTAGTGCCACTGAATGTCAGCTGTACTCTCTGATCTTCCATCTGTGCTAGTTTTCTTTGGCTCTCTGTTGAGGCACTTATAAAAGAAAAACCTATGTCTATTCAGGCAGAGAAGAATGAGCTCCGAGATGAAAAGCAAAGGCTAAAGGAAGAAAAGGATAATTTGGAGCAGCAGGTTAAAAGCTTAGCTTCTAAAGCAGGATTTCTCTCCCATCCTTCTGCCATGGGAGCTGCATTTACTGCACAAGG</genome_strand>
        <mrna_strand>GAAGAAGGGAATTAGGTCATGGAGGTCGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATGACGGATATTACTTCTGCTGCATCTGTTACCGTCGCTGAGTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACGATCTATGCTTCTTCTAATCTCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGAAACAGATTACACATTTGCGGATTCAGAAGTTAGCAAGGAGGCAAGCTCACGAAAGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAAAAGTGAATGTTGCAGCTCTCCGAGATCTAAGGCATGCAGAGAGAAATTGCGGAGGGACAGACTGAATGAGAG...................................................................................GTTCCTCGCATTGAGCTCTGTCCTTGATCCTGGAAGGCCACCAAAAACTGAGAAAGTTGCAATTCTAAGTGATGCTCAAAGGATGCTGATTGAGCTGCGAACTGAAACCCAGAAGCTGAAGGAGTCAAATGAGGAGCTGCAAGAGAAGATAAAAGAACTTAAG.......................................................................................................................GCAGAGAAGAATGAGCTCCGAGATGAAAAGCAAAGGCTAAAGGAAGAAAAGGATAATTTGGAGCAGCAGGTTAAAAGCTTAGCTTCTAAAGCAGGATTTCTCTCCCATCCTTCTGCCAGGGGAGCTGCATTTACTGCACAAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E304221" ref_strand="+" ref_description="SGN-E304221 [cLEX-6-J15]">
      <seq>gaaatttgaagaagggaattaggtcatggaggtcgattctagtgggaatcctaattggttatttgattatgagttgatgacggatattacttctgctgcatctgttaccgtcgctgagtttcagtctccggctactattgatttcagctggcctgctcaaacgatctatgcttcttctaatctcattactgaaacagattacacatttgcggattcagaagttagcaaggaggcaagctcacgaaagcggttaaaaagtgaatgttgcagctctccgagatctaaggcatgcagagagaaattgcggagggacagactgaatgagaggttcctcgcattgagctctgtccttgatcctggaaggccaccaaaaactgagaaagttgcaattctaagtgatgctcaaaggatgctgattgagctgcgaactgaaacccagaagctgaaggagtcaaatgaggagctgcaagagaagataaaagaacttaaggcagagaagaatgagctccgagatgaaaagcaaaggctaaaggaagaaaaggataatttggagcagcaggttaaaagcttagcttctaaagcaggatttctctcccatccttctgccatgggagctgcatttact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="48365" stop="43950"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48065" g_stop="47880" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="186" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47879" i_stop="46830" i_length="1050">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46829" g_stop="46767" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="249" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46766" i_stop="44828" i_length="1939">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44827" g_stop="44750" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="250" r_stop="327" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44749" i_stop="44667" i_length="83">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.657" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="44666" g_stop="44504" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="328" r_stop="490" r_length="163" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="44503" i_stop="44385" i_length="119">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.679" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="44384" g_stop="44250" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="491" r_stop="625" r_length="135" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E304221" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>625</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E304221" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48065" e_stop="47880"/>
          <exon e_start="46829" e_stop="46767"/>
          <exon e_start="44827" e_stop="44750"/>
          <exon e_start="44666" e_stop="44504"/>
          <exon e_start="44384" e_stop="44250"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAATTTGAAGAAGGGAATTAGGTCATGGAGGTCGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATGACGGATATTACTTCTGCTGCATCTGTTACCGTCGCTGAGTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACGATCTATGCTTCTTCTAATCTCATGTGAGTCTGCTCTTCCGCCCTTTTTTAATTCTTGTCAATTTGTTGTACAATTACTCTCATGGTCATTTTTTTTCTTTTCGAATGAGGCTTATATGGTTTGAACACGTGAAAAGGAGAGACAGTGACTTGAGTTGAAGGAGAAGTAAAGGGAGGCTGAAGAAATATTTGGAGAGGTGATTACACAAGACTTGATGCATCTTTAGATTACGAGGGGATGACCTTAGATAGGGATATGGAGGTCATGGATAGTGGTAGATGGGTTATTGGTAGTTGAGTGTTGTCTTACTTACGGAGGGATAGACTTGGTGGTAGTTTGGAGCATAGTATGTGCTTCTCCTTTCATAGCACTAGTATTAGTATTGCTTTGAATTGCTTTCCTTTCCTTTATTTGAACTGAGGATCTAGTGGAAACAATCTCTCTACCTCCACAAAGGTAGGGTAAGGTCTGCCTACACACTACTCTCTACATACTCCACTTGTGGGATTGCACTGAGATTGTTGTTGTTGTTGAATTTTAAAGAACAATAAAGAAAGTTTTATGTTAGGATTACAACTTCTCTTTTGACTTAAAACATGTGAGCTTTGTATATTAAATTCATTGAAATCGAGATGAAGGGGAAGGCGGAAGGTTGTGGTAAATTTGACACCTAGTTTCAAATAATCTTATCATAGAGTAGGAGGTAGCTTCAACAAGGAATTGTCACTTCAGCCAGTCTGTAGTTTGAAAAGTTGTTCCTTTCGAGCATAAGGAAAAAGTGCCTATCACTTTGTGTTGAGGTTATAGATTCCTCTCTAGATTACATTACTTTAAGATATAGAAAGACTGAAATTATGTTCGGTAAATATGTTTAGTAGGATTTATATCTATCAGCTTTTCCACCAAGGTTATTGTTAGTAATAACTATGAAAGACAAATGTCTAATCTTATGGGTGCGTACATGTTTAATGTCTCGAAAGGATGATGCAAAGTAGTGGGACATCAACACTTTACTGAAGCTGGTGCTTTGCTTTTACCATATCCATATTCTGATGGTCATCTATCTCTTTCAGTACTGAAACAGATTACACATTTGCGGATTCAGAAGTTAGCAAGGAGGCAAGCTCACGAAAGCGGTAAATAAATTATCCATTTCTTTTATATCATGGTTTGATAGGTTTGATGAACTCTTTTTATTACATTCTTCTTGTTTTAGAGATCTGGATCTGTTTATATATCCTATGTTCTAGTAAGGAGAAAACCTATTTGGCTATGGTTGTCCACTCTTAAATGTACTCATTTAAGAATTTTTCTTTCAAAATATGTGTATCCTACAACTATGTCACAGGCTAAAATGAAGTCTTGAATAGCCTTTCCTCCATTATTCCTAATATAACCATATCCCCCATGTATTGGGTCAAAACTGTCGTTATCTTTACCTACATGACCATTTAGATCTCCACAAATAAAAATCTGTTGGTCGTCTGGAATACCTTGAACCAAGGTGCCCATATCTTCCAAATATTTAGTTTTTGTTTCCACATCTAGTCCTATTTAGGGAGAATAGGTGGTAATGATATTCATTGTTTGATTTCACATGCAAGACTTAATGAGATAACTCAATCCTCACCACACTTTCCCTCTACAACCTTGTCTTTAACTCTTGGTTTTAGAATAATTGAAGTCCACGCTTTATTTGCGCTTTGTGTTTAAAACCCCCAACTGATCTTAGAGCTTTTTTGCTCTTTTTGCTTTTGATAACACTGCACACCACAACTCTCCTCCTTTATATGGGTTTGAGACCGGCCATTTGAGCAAAAGCTCATACAGGCTCTTCCTCCCAATCACTCCTTTCAGTTTTATGTTTGTCTATCACTGAGGAGAAGTTCGTTGATTACTCAAGAAACCTATTTTCCTTGCGAGATTCTTGGTTGTAGACTTGTAGTCTAGTAAATTTGTCAGCACAATGATATCCTGATATATCAGACAAAACAGCTGCCTAGTTTCTTTATACTTCTTCTCTTTTCCTTTTTTACGAAAAAGCTATTGTTTATTCTTGTTGCTGAGAGTAAGATAATTTATTAATGATCTCAATACTAATAATTACAAAATAGGGTTTCTATGCAGTATCTTTCATGCCCGGTTCTCTTGCTAATCATCCTACTGAACTCAGGCATGAATATCAGATAATGTGACATATCGAAAAATTTTACATTCTGTTTCCTATTTTATGGAGAACCCATTTAGAGTACCAATCTGGTGTGGATTGGTGTTTTCTTGTTTCAAGTCTGTATAAGAGTTTTACTATTATAAGTGATAATTTCCATTTGAAGGACTATCATCTCAAATTTGAACTGTCTATGTGGAAATCTCTGTTTCAGGTTTGACAATCCAATCTATCTAATTGCTAAAAGGAAATCTCAACATTTGATAGAGCTTTGTAGATATCTTCAATTAATATGCAGCCTTTCCAATAGTCAGTTATGAAAATTTAGCTTCAATATACTGCATCCTATCTATTAGTATTCTTACATCACACCTTTTTTCAATTGTCTCATTCTGTTGGCGATTCTAAGATGGACACAGCTTATTTAGTTTCCAGAGTAAAATTCCTTTCATTATGGGCTCAAAGTAAACAGATAGTTTTTAGCAACTTTAGGATGACTGTACATGTGATTCTTGTTCTTCTATATCTATGTAGATCATCAAATGAGAAATAATGAAATTCACTTTCACAATGTTGAACCTGAACAAAATTTTCTTTATTTTAGAGTTGTGTATCACATAAATTTCTCATAGGATTCCTATGGGTCATGATCATACCATTGCTAGCCATCCTTGTCTATATCCTTGTCCAGTGTCATTAGTTCCAATGAAAATATCCTTCAAAAGGTTGGCCATTAAAGTGAGTTGCTAATAGCACTCCCCTGCATCCCCAAGAAACAAGAAAATGAAAAAGAAAGTTTCTTTATTAAAACTGGTTGTTTCAGATAGCATTTTCTAAACAAAGAACAATGCTGTTTGAACTGGTATCATTCATTTCTTTCTTGTATATCTACTTAACTGTACGTACAGGTTAAAAAGTGAATGTTGCAGCTCTCCGAGATCTAAGGCATGCAGAGAGAAATTGCGGAGGGACAGACTGAATGAGAGGCATGATCTCTCCTTCTAGATCTCTTTCTTTTGACAAATTCACTTTCTTATGAATTCTCACATCCAAATCTGACATCATATAGGTTCCTCGCATTGAGCTCTGTCCTTGATCCTGGAAGGCCACCAAAAACTGAGAAAGTTGCAATTCTAAGTGATGCTCAAAGGATGCTGATTGAGCTGCGAACTGAAACCCAGAAGCTGAAGGAGTCAAATGAGGAGCTGCAAGAGAAGATAAAAGAACTTAAGGTGTAGTTTTAATTCTAGTGCCACTGAATGTCAGCTGTACTCTCTGATCTTCCATCTGTGCTAGTTTTCTTTGGCTCTCTGTTGAGGCACTTATAAAAGAAAAACCTATGTCTATTCAGGCAGAGAAGAATGAGCTCCGAGATGAAAAGCAAAGGCTAAAGGAAGAAAAGGATAATTTGGAGCAGCAGGTTAAAAGCTTAGCTTCTAAAGCAGGATTTCTCTCCCATCCTTCTGCCATGGGAGCTGCATTTACT</genome_strand>
        <mrna_strand>GAAATTTGAAGAAGGGAATTAGGTCATGGAGGTCGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATGACGGATATTACTTCTGCTGCATCTGTTACCGTCGCTGAGTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACGATCTATGCTTCTTCTAATCTCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGAAACAGATTACACATTTGCGGATTCAGAAGTTAGCAAGGAGGCAAGCTCACGAAAGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAAAAGTGAATGTTGCAGCTCTCCGAGATCTAAGGCATGCAGAGAGAAATTGCGGAGGGACAGACTGAATGAGAG...................................................................................GTTCCTCGCATTGAGCTCTGTCCTTGATCCTGGAAGGCCACCAAAAACTGAGAAAGTTGCAATTCTAAGTGATGCTCAAAGGATGCTGATTGAGCTGCGAACTGAAACCCAGAAGCTGAAGGAGTCAAATGAGGAGCTGCAAGAGAAGATAAAAGAACTTAAG.......................................................................................................................GCAGAGAAGAATGAGCTCCGAGATGAAAAGCAAAGGCTAAAGGAAGAAAAGGATAATTTGGAGCAGCAGGTTAAAAGCTTAGCTTCTAAAGCAGGATTTCTCTCCCATCCTTCTGCCATGGGAGCTGCATTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E542123" ref_strand="+" ref_description="SGN-E542123 [TUS-63-E7]">
      <seq>gaagaagggaattaggtcatggaggtcgattctagtgggaatcctaattggttatttgattatgagttgatgacggatattacttctgctgcatctgttaccgtcgctgagtttcagtctccggctactattgatttcagctggcctgctcaaacgatctatgcttcttctaatctcattactgaaacagattacacatttgcggattcagaagttagcaaggaggcaagctcacgaaagcggttaaaaagtgaatgttgcagctctccgagatctaaggcatgcagagagaaattgcggagggacagactgaatgagaggttcctcgcattgagctctgtccttgatcctggaaggccaccaaaaactgagaaagttgcaattctaagtgatgctcaaaggatgctgattgagctgcgaactgaaacccagaagctgaaggagtcaaatgaggagctgcaagagaagataaaagaacttaaggcagagaagaatgagctccgagatgaaaagcaaaggctaaagggagaaaaggataatttggagcagcaagttaaaagcttaacttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="48358" stop="43998"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48058" g_stop="47880" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="179" r_length="179" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47879" i_stop="46830" i_length="1050">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46829" g_stop="46767" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="242" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46766" i_stop="44828" i_length="1939">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44827" g_stop="44750" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="320" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44749" i_stop="44667" i_length="83">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.657" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="44666" g_stop="44504" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="483" r_length="163" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="44503" i_stop="44385" i_length="119">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.679" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="44384" g_stop="44298" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="484" r_stop="570" r_length="87" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E542123" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>570</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E542123" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48058" e_stop="47880"/>
          <exon e_start="46829" e_stop="46767"/>
          <exon e_start="44827" e_stop="44750"/>
          <exon e_start="44666" e_stop="44504"/>
          <exon e_start="44384" e_stop="44298"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGAAGGGAATTAGGTCATGGAGGTCGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATGACGGATATTACTTCTGCTGCATCTGTTACCGTCGCTGAGTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACGATCTATGCTTCTTCTAATCTCATGTGAGTCTGCTCTTCCGCCCTTTTTTAATTCTTGTCAATTTGTTGTACAATTACTCTCATGGTCATTTTTTTTCTTTTCGAATGAGGCTTATATGGTTTGAACACGTGAAAAGGAGAGACAGTGACTTGAGTTGAAGGAGAAGTAAAGGGAGGCTGAAGAAATATTTGGAGAGGTGATTACACAAGACTTGATGCATCTTTAGATTACGAGGGGATGACCTTAGATAGGGATATGGAGGTCATGGATAGTGGTAGATGGGTTATTGGTAGTTGAGTGTTGTCTTACTTACGGAGGGATAGACTTGGTGGTAGTTTGGAGCATAGTATGTGCTTCTCCTTTCATAGCACTAGTATTAGTATTGCTTTGAATTGCTTTCCTTTCCTTTATTTGAACTGAGGATCTAGTGGAAACAATCTCTCTACCTCCACAAAGGTAGGGTAAGGTCTGCCTACACACTACTCTCTACATACTCCACTTGTGGGATTGCACTGAGATTGTTGTTGTTGTTGAATTTTAAAGAACAATAAAGAAAGTTTTATGTTAGGATTACAACTTCTCTTTTGACTTAAAACATGTGAGCTTTGTATATTAAATTCATTGAAATCGAGATGAAGGGGAAGGCGGAAGGTTGTGGTAAATTTGACACCTAGTTTCAAATAATCTTATCATAGAGTAGGAGGTAGCTTCAACAAGGAATTGTCACTTCAGCCAGTCTGTAGTTTGAAAAGTTGTTCCTTTCGAGCATAAGGAAAAAGTGCCTATCACTTTGTGTTGAGGTTATAGATTCCTCTCTAGATTACATTACTTTAAGATATAGAAAGACTGAAATTATGTTCGGTAAATATGTTTAGTAGGATTTATATCTATCAGCTTTTCCACCAAGGTTATTGTTAGTAATAACTATGAAAGACAAATGTCTAATCTTATGGGTGCGTACATGTTTAATGTCTCGAAAGGATGATGCAAAGTAGTGGGACATCAACACTTTACTGAAGCTGGTGCTTTGCTTTTACCATATCCATATTCTGATGGTCATCTATCTCTTTCAGTACTGAAACAGATTACACATTTGCGGATTCAGAAGTTAGCAAGGAGGCAAGCTCACGAAAGCGGTAAATAAATTATCCATTTCTTTTATATCATGGTTTGATAGGTTTGATGAACTCTTTTTATTACATTCTTCTTGTTTTAGAGATCTGGATCTGTTTATATATCCTATGTTCTAGTAAGGAGAAAACCTATTTGGCTATGGTTGTCCACTCTTAAATGTACTCATTTAAGAATTTTTCTTTCAAAATATGTGTATCCTACAACTATGTCACAGGCTAAAATGAAGTCTTGAATAGCCTTTCCTCCATTATTCCTAATATAACCATATCCCCCATGTATTGGGTCAAAACTGTCGTTATCTTTACCTACATGACCATTTAGATCTCCACAAATAAAAATCTGTTGGTCGTCTGGAATACCTTGAACCAAGGTGCCCATATCTTCCAAATATTTAGTTTTTGTTTCCACATCTAGTCCTATTTAGGGAGAATAGGTGGTAATGATATTCATTGTTTGATTTCACATGCAAGACTTAATGAGATAACTCAATCCTCACCACACTTTCCCTCTACAACCTTGTCTTTAACTCTTGGTTTTAGAATAATTGAAGTCCACGCTTTATTTGCGCTTTGTGTTTAAAACCCCCAACTGATCTTAGAGCTTTTTTGCTCTTTTTGCTTTTGATAACACTGCACACCACAACTCTCCTCCTTTATATGGGTTTGAGACCGGCCATTTGAGCAAAAGCTCATACAGGCTCTTCCTCCCAATCACTCCTTTCAGTTTTATGTTTGTCTATCACTGAGGAGAAGTTCGTTGATTACTCAAGAAACCTATTTTCCTTGCGAGATTCTTGGTTGTAGACTTGTAGTCTAGTAAATTTGTCAGCACAATGATATCCTGATATATCAGACAAAACAGCTGCCTAGTTTCTTTATACTTCTTCTCTTTTCCTTTTTTACGAAAAAGCTATTGTTTATTCTTGTTGCTGAGAGTAAGATAATTTATTAATGATCTCAATACTAATAATTACAAAATAGGGTTTCTATGCAGTATCTTTCATGCCCGGTTCTCTTGCTAATCATCCTACTGAACTCAGGCATGAATATCAGATAATGTGACATATCGAAAAATTTTACATTCTGTTTCCTATTTTATGGAGAACCCATTTAGAGTACCAATCTGGTGTGGATTGGTGTTTTCTTGTTTCAAGTCTGTATAAGAGTTTTACTATTATAAGTGATAATTTCCATTTGAAGGACTATCATCTCAAATTTGAACTGTCTATGTGGAAATCTCTGTTTCAGGTTTGACAATCCAATCTATCTAATTGCTAAAAGGAAATCTCAACATTTGATAGAGCTTTGTAGATATCTTCAATTAATATGCAGCCTTTCCAATAGTCAGTTATGAAAATTTAGCTTCAATATACTGCATCCTATCTATTAGTATTCTTACATCACACCTTTTTTCAATTGTCTCATTCTGTTGGCGATTCTAAGATGGACACAGCTTATTTAGTTTCCAGAGTAAAATTCCTTTCATTATGGGCTCAAAGTAAACAGATAGTTTTTAGCAACTTTAGGATGACTGTACATGTGATTCTTGTTCTTCTATATCTATGTAGATCATCAAATGAGAAATAATGAAATTCACTTTCACAATGTTGAACCTGAACAAAATTTTCTTTATTTTAGAGTTGTGTATCACATAAATTTCTCATAGGATTCCTATGGGTCATGATCATACCATTGCTAGCCATCCTTGTCTATATCCTTGTCCAGTGTCATTAGTTCCAATGAAAATATCCTTCAAAAGGTTGGCCATTAAAGTGAGTTGCTAATAGCACTCCCCTGCATCCCCAAGAAACAAGAAAATGAAAAAGAAAGTTTCTTTATTAAAACTGGTTGTTTCAGATAGCATTTTCTAAACAAAGAACAATGCTGTTTGAACTGGTATCATTCATTTCTTTCTTGTATATCTACTTAACTGTACGTACAGGTTAAAAAGTGAATGTTGCAGCTCTCCGAGATCTAAGGCATGCAGAGAGAAATTGCGGAGGGACAGACTGAATGAGAGGCATGATCTCTCCTTCTAGATCTCTTTCTTTTGACAAATTCACTTTCTTATGAATTCTCACATCCAAATCTGACATCATATAGGTTCCTCGCATTGAGCTCTGTCCTTGATCCTGGAAGGCCACCAAAAACTGAGAAAGTTGCAATTCTAAGTGATGCTCAAAGGATGCTGATTGAGCTGCGAACTGAAACCCAGAAGCTGAAGGAGTCAAATGAGGAGCTGCAAGAGAAGATAAAAGAACTTAAGGTGTAGTTTTAATTCTAGTGCCACTGAATGTCAGCTGTACTCTCTGATCTTCCATCTGTGCTAGTTTTCTTTGGCTCTCTGTTGAGGCACTTATAAAAGAAAAACCTATGTCTATTCAGGCAGAGAAGAATGAGCTCCGAGATGAAAAGCAAAGGCTAAAGGAAGAAAAGGATAATTTGGAGCAGCAGGTTAAAAGCTTAGCTTCT</genome_strand>
        <mrna_strand>GAAGAAGGGAATTAGGTCATGGAGGTCGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATGACGGATATTACTTCTGCTGCATCTGTTACCGTCGCTGAGTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACGATCTATGCTTCTTCTAATCTCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGAAACAGATTACACATTTGCGGATTCAGAAGTTAGCAAGGAGGCAAGCTCACGAAAGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAAAAGTGAATGTTGCAGCTCTCCGAGATCTAAGGCATGCAGAGAGAAATTGCGGAGGGACAGACTGAATGAGAG...................................................................................GTTCCTCGCATTGAGCTCTGTCCTTGATCCTGGAAGGCCACCAAAAACTGAGAAAGTTGCAATTCTAAGTGATGCTCAAAGGATGCTGATTGAGCTGCGAACTGAAACCCAGAAGCTGAAGGAGTCAAATGAGGAGCTGCAAGAGAAGATAAAAGAACTTAAG.......................................................................................................................GCAGAGAAGAATGAGCTCCGAGATGAAAAGCAAAGGCTAAAGGGAGAAAAGGATAATTTGGAGCAGCAAGTTAAAAGCTTAACTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E299974" ref_strand="+" ref_description="SGN-E299974 [cLEW-11-E16]">
      <seq>aagaagggaattaggtcatggaggtcgattctagtgggaatcctaattggttatttgattatgagttgatgacggatattacttctgctgcatctgttaccgtcgctgagtttcagtctccggctactattgatttcagctggcctgctcaaacgatctatgcttcttctaatctcattactgaaacagattacacatttgcggattcagaagttagcaaggaggcaagctcacgaaagcggttaaaaagtgaatgttgcagctctccgagatctaaggcatgcagagagaaattgcggagggacagactgaatgagaggttcctcgcattgagctctgtccttgatcctggaaggccaccaaaaactgagaaagttgcaattctaagtgatgctcaaaggatgctgattgagctgcgaactgaaacccagaagctgaaggagtcaaatgaggagctgcaagagaagataaaagaacttaaggcagagaagaatgagctccgagatgaaaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="48357" stop="44054"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48057" g_stop="47880" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="178" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47879" i_stop="46830" i_length="1050">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46829" g_stop="46767" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="241" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46766" i_stop="44828" i_length="1939">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44827" g_stop="44750" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="319" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44749" i_stop="44667" i_length="83">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.657" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="44666" g_stop="44504" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="482" r_length="163" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="44503" i_stop="44385" i_length="119">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.679" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="44384" g_stop="44354" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="483" r_stop="513" r_length="31" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E299974" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>513</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E299974" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48057" e_stop="47880"/>
          <exon e_start="46829" e_stop="46767"/>
          <exon e_start="44827" e_stop="44750"/>
          <exon e_start="44666" e_stop="44504"/>
          <exon e_start="44384" e_stop="44354"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAAGGGAATTAGGTCATGGAGGTCGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATGACGGATATTACTTCTGCTGCATCTGTTACCGTCGCTGAGTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACGATCTATGCTTCTTCTAATCTCATGTGAGTCTGCTCTTCCGCCCTTTTTTAATTCTTGTCAATTTGTTGTACAATTACTCTCATGGTCATTTTTTTTCTTTTCGAATGAGGCTTATATGGTTTGAACACGTGAAAAGGAGAGACAGTGACTTGAGTTGAAGGAGAAGTAAAGGGAGGCTGAAGAAATATTTGGAGAGGTGATTACACAAGACTTGATGCATCTTTAGATTACGAGGGGATGACCTTAGATAGGGATATGGAGGTCATGGATAGTGGTAGATGGGTTATTGGTAGTTGAGTGTTGTCTTACTTACGGAGGGATAGACTTGGTGGTAGTTTGGAGCATAGTATGTGCTTCTCCTTTCATAGCACTAGTATTAGTATTGCTTTGAATTGCTTTCCTTTCCTTTATTTGAACTGAGGATCTAGTGGAAACAATCTCTCTACCTCCACAAAGGTAGGGTAAGGTCTGCCTACACACTACTCTCTACATACTCCACTTGTGGGATTGCACTGAGATTGTTGTTGTTGTTGAATTTTAAAGAACAATAAAGAAAGTTTTATGTTAGGATTACAACTTCTCTTTTGACTTAAAACATGTGAGCTTTGTATATTAAATTCATTGAAATCGAGATGAAGGGGAAGGCGGAAGGTTGTGGTAAATTTGACACCTAGTTTCAAATAATCTTATCATAGAGTAGGAGGTAGCTTCAACAAGGAATTGTCACTTCAGCCAGTCTGTAGTTTGAAAAGTTGTTCCTTTCGAGCATAAGGAAAAAGTGCCTATCACTTTGTGTTGAGGTTATAGATTCCTCTCTAGATTACATTACTTTAAGATATAGAAAGACTGAAATTATGTTCGGTAAATATGTTTAGTAGGATTTATATCTATCAGCTTTTCCACCAAGGTTATTGTTAGTAATAACTATGAAAGACAAATGTCTAATCTTATGGGTGCGTACATGTTTAATGTCTCGAAAGGATGATGCAAAGTAGTGGGACATCAACACTTTACTGAAGCTGGTGCTTTGCTTTTACCATATCCATATTCTGATGGTCATCTATCTCTTTCAGTACTGAAACAGATTACACATTTGCGGATTCAGAAGTTAGCAAGGAGGCAAGCTCACGAAAGCGGTAAATAAATTATCCATTTCTTTTATATCATGGTTTGATAGGTTTGATGAACTCTTTTTATTACATTCTTCTTGTTTTAGAGATCTGGATCTGTTTATATATCCTATGTTCTAGTAAGGAGAAAACCTATTTGGCTATGGTTGTCCACTCTTAAATGTACTCATTTAAGAATTTTTCTTTCAAAATATGTGTATCCTACAACTATGTCACAGGCTAAAATGAAGTCTTGAATAGCCTTTCCTCCATTATTCCTAATATAACCATATCCCCCATGTATTGGGTCAAAACTGTCGTTATCTTTACCTACATGACCATTTAGATCTCCACAAATAAAAATCTGTTGGTCGTCTGGAATACCTTGAACCAAGGTGCCCATATCTTCCAAATATTTAGTTTTTGTTTCCACATCTAGTCCTATTTAGGGAGAATAGGTGGTAATGATATTCATTGTTTGATTTCACATGCAAGACTTAATGAGATAACTCAATCCTCACCACACTTTCCCTCTACAACCTTGTCTTTAACTCTTGGTTTTAGAATAATTGAAGTCCACGCTTTATTTGCGCTTTGTGTTTAAAACCCCCAACTGATCTTAGAGCTTTTTTGCTCTTTTTGCTTTTGATAACACTGCACACCACAACTCTCCTCCTTTATATGGGTTTGAGACCGGCCATTTGAGCAAAAGCTCATACAGGCTCTTCCTCCCAATCACTCCTTTCAGTTTTATGTTTGTCTATCACTGAGGAGAAGTTCGTTGATTACTCAAGAAACCTATTTTCCTTGCGAGATTCTTGGTTGTAGACTTGTAGTCTAGTAAATTTGTCAGCACAATGATATCCTGATATATCAGACAAAACAGCTGCCTAGTTTCTTTATACTTCTTCTCTTTTCCTTTTTTACGAAAAAGCTATTGTTTATTCTTGTTGCTGAGAGTAAGATAATTTATTAATGATCTCAATACTAATAATTACAAAATAGGGTTTCTATGCAGTATCTTTCATGCCCGGTTCTCTTGCTAATCATCCTACTGAACTCAGGCATGAATATCAGATAATGTGACATATCGAAAAATTTTACATTCTGTTTCCTATTTTATGGAGAACCCATTTAGAGTACCAATCTGGTGTGGATTGGTGTTTTCTTGTTTCAAGTCTGTATAAGAGTTTTACTATTATAAGTGATAATTTCCATTTGAAGGACTATCATCTCAAATTTGAACTGTCTATGTGGAAATCTCTGTTTCAGGTTTGACAATCCAATCTATCTAATTGCTAAAAGGAAATCTCAACATTTGATAGAGCTTTGTAGATATCTTCAATTAATATGCAGCCTTTCCAATAGTCAGTTATGAAAATTTAGCTTCAATATACTGCATCCTATCTATTAGTATTCTTACATCACACCTTTTTTCAATTGTCTCATTCTGTTGGCGATTCTAAGATGGACACAGCTTATTTAGTTTCCAGAGTAAAATTCCTTTCATTATGGGCTCAAAGTAAACAGATAGTTTTTAGCAACTTTAGGATGACTGTACATGTGATTCTTGTTCTTCTATATCTATGTAGATCATCAAATGAGAAATAATGAAATTCACTTTCACAATGTTGAACCTGAACAAAATTTTCTTTATTTTAGAGTTGTGTATCACATAAATTTCTCATAGGATTCCTATGGGTCATGATCATACCATTGCTAGCCATCCTTGTCTATATCCTTGTCCAGTGTCATTAGTTCCAATGAAAATATCCTTCAAAAGGTTGGCCATTAAAGTGAGTTGCTAATAGCACTCCCCTGCATCCCCAAGAAACAAGAAAATGAAAAAGAAAGTTTCTTTATTAAAACTGGTTGTTTCAGATAGCATTTTCTAAACAAAGAACAATGCTGTTTGAACTGGTATCATTCATTTCTTTCTTGTATATCTACTTAACTGTACGTACAGGTTAAAAAGTGAATGTTGCAGCTCTCCGAGATCTAAGGCATGCAGAGAGAAATTGCGGAGGGACAGACTGAATGAGAGGCATGATCTCTCCTTCTAGATCTCTTTCTTTTGACAAATTCACTTTCTTATGAATTCTCACATCCAAATCTGACATCATATAGGTTCCTCGCATTGAGCTCTGTCCTTGATCCTGGAAGGCCACCAAAAACTGAGAAAGTTGCAATTCTAAGTGATGCTCAAAGGATGCTGATTGAGCTGCGAACTGAAACCCAGAAGCTGAAGGAGTCAAATGAGGAGCTGCAAGAGAAGATAAAAGAACTTAAGGTGTAGTTTTAATTCTAGTGCCACTGAATGTCAGCTGTACTCTCTGATCTTCCATCTGTGCTAGTTTTCTTTGGCTCTCTGTTGAGGCACTTATAAAAGAAAAACCTATGTCTATTCAGGCAGAGAAGAATGAGCTCCGAGATGAAAAGC</genome_strand>
        <mrna_strand>AAGAAGGGAATTAGGTCATGGAGGTCGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATGACGGATATTACTTCTGCTGCATCTGTTACCGTCGCTGAGTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACGATCTATGCTTCTTCTAATCTCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGAAACAGATTACACATTTGCGGATTCAGAAGTTAGCAAGGAGGCAAGCTCACGAAAGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAAAAGTGAATGTTGCAGCTCTCCGAGATCTAAGGCATGCAGAGAGAAATTGCGGAGGGACAGACTGAATGAGAG...................................................................................GTTCCTCGCATTGAGCTCTGTCCTTGATCCTGGAAGGCCACCAAAAACTGAGAAAGTTGCAATTCTAAGTGATGCTCAAAGGATGCTGATTGAGCTGCGAACTGAAACCCAGAAGCTGAAGGAGTCAAATGAGGAGCTGCAAGAGAAGATAAAAGAACTTAAG.......................................................................................................................GCAGAGAAGAATGAGCTCCGAGATGAAAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E307381" ref_strand="+" ref_description="SGN-E307381 [cLEY-12-I5]">
      <seq>tggttttgtagtgtgcagagcaaaagggaagggggaaatttgaagaagggaattaggtcatggaggtcgattctagtgggaatcctaattggttatttgattatgagttgatgacggatattacttctgctgcatctgttaccgtcgctgagtttcagtctccggctactattgatttcagctggcctgctcaaacgatctatgcttcttctaatctcattactgaaacagattacacatttgcggattcagaagttagcaaggaggcaagctcacgaaagcggttaaaaagtgaatgttgcagctctccgagatctaaggcatgcagagagaaattgcggagggacagactgaatgagaggttcctcgcattgagctctgtccttgatcctggaaggccaccaaaaactgagaaagttgcaattctaagtgatgctcaaaggatgctgattgagctgcgaactgaaacccagaagctgaaggagtcaaatgaggagctgcaagagaagataaaagaacttaaggcagagaagaatgagctccgagatgaaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="48399" stop="44055"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48099" g_stop="47880" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="220" r_length="220" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47879" i_stop="46830" i_length="1050">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46829" g_stop="46767" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="283" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46766" i_stop="44828" i_length="1939">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44827" g_stop="44750" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="361" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44749" i_stop="44667" i_length="83">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.657" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="44666" g_stop="44504" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="362" r_stop="524" r_length="163" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="44503" i_stop="44385" i_length="119">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.679" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="44384" g_stop="44355" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="525" r_stop="554" r_length="30" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E307381" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E307381" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48099" e_stop="47880"/>
          <exon e_start="46829" e_stop="46767"/>
          <exon e_start="44827" e_stop="44750"/>
          <exon e_start="44666" e_stop="44504"/>
          <exon e_start="44384" e_stop="44355"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTTTTGTAGTGTGCAGAGCAAAAGGGAAGGGGGAAATTTGAAGAAGGGAATTAGGTCATGGAGGTCGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATGACGGATATTACTTCTGCTGCATCTGTTACCGTCGCTGAGTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACGATCTATGCTTCTTCTAATCTCATGTGAGTCTGCTCTTCCGCCCTTTTTTAATTCTTGTCAATTTGTTGTACAATTACTCTCATGGTCATTTTTTTTCTTTTCGAATGAGGCTTATATGGTTTGAACACGTGAAAAGGAGAGACAGTGACTTGAGTTGAAGGAGAAGTAAAGGGAGGCTGAAGAAATATTTGGAGAGGTGATTACACAAGACTTGATGCATCTTTAGATTACGAGGGGATGACCTTAGATAGGGATATGGAGGTCATGGATAGTGGTAGATGGGTTATTGGTAGTTGAGTGTTGTCTTACTTACGGAGGGATAGACTTGGTGGTAGTTTGGAGCATAGTATGTGCTTCTCCTTTCATAGCACTAGTATTAGTATTGCTTTGAATTGCTTTCCTTTCCTTTATTTGAACTGAGGATCTAGTGGAAACAATCTCTCTACCTCCACAAAGGTAGGGTAAGGTCTGCCTACACACTACTCTCTACATACTCCACTTGTGGGATTGCACTGAGATTGTTGTTGTTGTTGAATTTTAAAGAACAATAAAGAAAGTTTTATGTTAGGATTACAACTTCTCTTTTGACTTAAAACATGTGAGCTTTGTATATTAAATTCATTGAAATCGAGATGAAGGGGAAGGCGGAAGGTTGTGGTAAATTTGACACCTAGTTTCAAATAATCTTATCATAGAGTAGGAGGTAGCTTCAACAAGGAATTGTCACTTCAGCCAGTCTGTAGTTTGAAAAGTTGTTCCTTTCGAGCATAAGGAAAAAGTGCCTATCACTTTGTGTTGAGGTTATAGATTCCTCTCTAGATTACATTACTTTAAGATATAGAAAGACTGAAATTATGTTCGGTAAATATGTTTAGTAGGATTTATATCTATCAGCTTTTCCACCAAGGTTATTGTTAGTAATAACTATGAAAGACAAATGTCTAATCTTATGGGTGCGTACATGTTTAATGTCTCGAAAGGATGATGCAAAGTAGTGGGACATCAACACTTTACTGAAGCTGGTGCTTTGCTTTTACCATATCCATATTCTGATGGTCATCTATCTCTTTCAGTACTGAAACAGATTACACATTTGCGGATTCAGAAGTTAGCAAGGAGGCAAGCTCACGAAAGCGGTAAATAAATTATCCATTTCTTTTATATCATGGTTTGATAGGTTTGATGAACTCTTTTTATTACATTCTTCTTGTTTTAGAGATCTGGATCTGTTTATATATCCTATGTTCTAGTAAGGAGAAAACCTATTTGGCTATGGTTGTCCACTCTTAAATGTACTCATTTAAGAATTTTTCTTTCAAAATATGTGTATCCTACAACTATGTCACAGGCTAAAATGAAGTCTTGAATAGCCTTTCCTCCATTATTCCTAATATAACCATATCCCCCATGTATTGGGTCAAAACTGTCGTTATCTTTACCTACATGACCATTTAGATCTCCACAAATAAAAATCTGTTGGTCGTCTGGAATACCTTGAACCAAGGTGCCCATATCTTCCAAATATTTAGTTTTTGTTTCCACATCTAGTCCTATTTAGGGAGAATAGGTGGTAATGATATTCATTGTTTGATTTCACATGCAAGACTTAATGAGATAACTCAATCCTCACCACACTTTCCCTCTACAACCTTGTCTTTAACTCTTGGTTTTAGAATAATTGAAGTCCACGCTTTATTTGCGCTTTGTGTTTAAAACCCCCAACTGATCTTAGAGCTTTTTTGCTCTTTTTGCTTTTGATAACACTGCACACCACAACTCTCCTCCTTTATATGGGTTTGAGACCGGCCATTTGAGCAAAAGCTCATACAGGCTCTTCCTCCCAATCACTCCTTTCAGTTTTATGTTTGTCTATCACTGAGGAGAAGTTCGTTGATTACTCAAGAAACCTATTTTCCTTGCGAGATTCTTGGTTGTAGACTTGTAGTCTAGTAAATTTGTCAGCACAATGATATCCTGATATATCAGACAAAACAGCTGCCTAGTTTCTTTATACTTCTTCTCTTTTCCTTTTTTACGAAAAAGCTATTGTTTATTCTTGTTGCTGAGAGTAAGATAATTTATTAATGATCTCAATACTAATAATTACAAAATAGGGTTTCTATGCAGTATCTTTCATGCCCGGTTCTCTTGCTAATCATCCTACTGAACTCAGGCATGAATATCAGATAATGTGACATATCGAAAAATTTTACATTCTGTTTCCTATTTTATGGAGAACCCATTTAGAGTACCAATCTGGTGTGGATTGGTGTTTTCTTGTTTCAAGTCTGTATAAGAGTTTTACTATTATAAGTGATAATTTCCATTTGAAGGACTATCATCTCAAATTTGAACTGTCTATGTGGAAATCTCTGTTTCAGGTTTGACAATCCAATCTATCTAATTGCTAAAAGGAAATCTCAACATTTGATAGAGCTTTGTAGATATCTTCAATTAATATGCAGCCTTTCCAATAGTCAGTTATGAAAATTTAGCTTCAATATACTGCATCCTATCTATTAGTATTCTTACATCACACCTTTTTTCAATTGTCTCATTCTGTTGGCGATTCTAAGATGGACACAGCTTATTTAGTTTCCAGAGTAAAATTCCTTTCATTATGGGCTCAAAGTAAACAGATAGTTTTTAGCAACTTTAGGATGACTGTACATGTGATTCTTGTTCTTCTATATCTATGTAGATCATCAAATGAGAAATAATGAAATTCACTTTCACAATGTTGAACCTGAACAAAATTTTCTTTATTTTAGAGTTGTGTATCACATAAATTTCTCATAGGATTCCTATGGGTCATGATCATACCATTGCTAGCCATCCTTGTCTATATCCTTGTCCAGTGTCATTAGTTCCAATGAAAATATCCTTCAAAAGGTTGGCCATTAAAGTGAGTTGCTAATAGCACTCCCCTGCATCCCCAAGAAACAAGAAAATGAAAAAGAAAGTTTCTTTATTAAAACTGGTTGTTTCAGATAGCATTTTCTAAACAAAGAACAATGCTGTTTGAACTGGTATCATTCATTTCTTTCTTGTATATCTACTTAACTGTACGTACAGGTTAAAAAGTGAATGTTGCAGCTCTCCGAGATCTAAGGCATGCAGAGAGAAATTGCGGAGGGACAGACTGAATGAGAGGCATGATCTCTCCTTCTAGATCTCTTTCTTTTGACAAATTCACTTTCTTATGAATTCTCACATCCAAATCTGACATCATATAGGTTCCTCGCATTGAGCTCTGTCCTTGATCCTGGAAGGCCACCAAAAACTGAGAAAGTTGCAATTCTAAGTGATGCTCAAAGGATGCTGATTGAGCTGCGAACTGAAACCCAGAAGCTGAAGGAGTCAAATGAGGAGCTGCAAGAGAAGATAAAAGAACTTAAGGTGTAGTTTTAATTCTAGTGCCACTGAATGTCAGCTGTACTCTCTGATCTTCCATCTGTGCTAGTTTTCTTTGGCTCTCTGTTGAGGCACTTATAAAAGAAAAACCTATGTCTATTCAGGCAGAGAAGAATGAGCTCCGAGATGAAAAG</genome_strand>
        <mrna_strand>TGGTTTTGTAGTGTGCAGAGCAAAAGGGAAGGGGGAAATTTGAAGAAGGGAATTAGGTCATGGAGGTCGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATGACGGATATTACTTCTGCTGCATCTGTTACCGTCGCTGAGTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACGATCTATGCTTCTTCTAATCTCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGAAACAGATTACACATTTGCGGATTCAGAAGTTAGCAAGGAGGCAAGCTCACGAAAGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAAAAGTGAATGTTGCAGCTCTCCGAGATCTAAGGCATGCAGAGAGAAATTGCGGAGGGACAGACTGAATGAGAG...................................................................................GTTCCTCGCATTGAGCTCTGTCCTTGATCCTGGAAGGCCACCAAAAACTGAGAAAGTTGCAATTCTAAGTGATGCTCAAAGGATGCTGATTGAGCTGCGAACTGAAACCCAGAAGCTGAAGGAGTCAAATGAGGAGCTGCAAGAGAAGATAAAAGAACTTAAG.......................................................................................................................GCAGAGAAGAATGAGCTCCGAGATGAAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E466976" ref_strand="+" ref_description="SGN-E466976 [cPRO-26-N9]">
      <seq>gagaaattgaaagagggaattaggtcatggaggttgattctagtgggaatcctaattggttatttgattatgagttgataacggatattacttctgctgcttctgttaccgtcactgattttcagtctccggctactattgatttcagctggcctgctcaaacaatctatgcttcctctaatctcattgctgaaacagattacacatttgcggattcagaagtcagtaaggaggcaagctcacgaaagaggttaaaaagtgaatggtgcagctctccgagatctaaggcatgccgagagaaattgcggagggacagactgaatgagaggttcctcgaattgagctctgtccttgatcctggaaggccaccaaaaactgagaaagttgcaattctgagtgatgctcaaaggatgctgattgagctgcgaactgaaacccagaagctgaaggagtcaaatgaggagctgcaagagaagataaaagaacttaaggcagagaagaatgagctccgtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="48367" stop="44062"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48067" g_stop="47880" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="187" r_length="187" r_score="0.941"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47879" i_stop="46830" i_length="1050">
            <donor d_prob="0.996" d_score="0.96"/>
            <acceptor a_prob="0.991" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46829" g_stop="46767" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="250" r_length="63" r_score="0.937"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46766" i_stop="44828" i_length="1939">
            <donor d_prob="0.997" d_score="0.94"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44827" g_stop="44750" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="251" r_stop="328" r_length="78" r_score="0.974"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44749" i_stop="44667" i_length="83">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.657" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="44666" g_stop="44504" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="329" r_stop="491" r_length="163" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="44503" i_stop="44385" i_length="119">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.679" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="44384" g_stop="44362" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="492" r_stop="514" r_length="23" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E466976" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>515</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E466976" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48067" e_stop="47880"/>
          <exon e_start="46829" e_stop="46767"/>
          <exon e_start="44827" e_stop="44750"/>
          <exon e_start="44666" e_stop="44504"/>
          <exon e_start="44384" e_stop="44362"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGAAATTTGAAGAAGGGAATTAGGTCATGGAGGTCGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATGACGGATATTACTTCTGCTGCATCTGTTACCGTCGCTGAGTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACGATCTATGCTTCTTCTAATCTCATGTGAGTCTGCTCTTCCGCCCTTTTTTAATTCTTGTCAATTTGTTGTACAATTACTCTCATGGTCATTTTTTTTCTTTTCGAATGAGGCTTATATGGTTTGAACACGTGAAAAGGAGAGACAGTGACTTGAGTTGAAGGAGAAGTAAAGGGAGGCTGAAGAAATATTTGGAGAGGTGATTACACAAGACTTGATGCATCTTTAGATTACGAGGGGATGACCTTAGATAGGGATATGGAGGTCATGGATAGTGGTAGATGGGTTATTGGTAGTTGAGTGTTGTCTTACTTACGGAGGGATAGACTTGGTGGTAGTTTGGAGCATAGTATGTGCTTCTCCTTTCATAGCACTAGTATTAGTATTGCTTTGAATTGCTTTCCTTTCCTTTATTTGAACTGAGGATCTAGTGGAAACAATCTCTCTACCTCCACAAAGGTAGGGTAAGGTCTGCCTACACACTACTCTCTACATACTCCACTTGTGGGATTGCACTGAGATTGTTGTTGTTGTTGAATTTTAAAGAACAATAAAGAAAGTTTTATGTTAGGATTACAACTTCTCTTTTGACTTAAAACATGTGAGCTTTGTATATTAAATTCATTGAAATCGAGATGAAGGGGAAGGCGGAAGGTTGTGGTAAATTTGACACCTAGTTTCAAATAATCTTATCATAGAGTAGGAGGTAGCTTCAACAAGGAATTGTCACTTCAGCCAGTCTGTAGTTTGAAAAGTTGTTCCTTTCGAGCATAAGGAAAAAGTGCCTATCACTTTGTGTTGAGGTTATAGATTCCTCTCTAGATTACATTACTTTAAGATATAGAAAGACTGAAATTATGTTCGGTAAATATGTTTAGTAGGATTTATATCTATCAGCTTTTCCACCAAGGTTATTGTTAGTAATAACTATGAAAGACAAATGTCTAATCTTATGGGTGCGTACATGTTTAATGTCTCGAAAGGATGATGCAAAGTAGTGGGACATCAACACTTTACTGAAGCTGGTGCTTTGCTTTTACCATATCCATATTCTGATGGTCATCTATCTCTTTCAGTACTGAAACAGATTACACATTTGCGGATTCAGAAGTTAGCAAGGAGGCAAGCTCACGAAAGCGGTAAATAAATTATCCATTTCTTTTATATCATGGTTTGATAGGTTTGATGAACTCTTTTTATTACATTCTTCTTGTTTTAGAGATCTGGATCTGTTTATATATCCTATGTTCTAGTAAGGAGAAAACCTATTTGGCTATGGTTGTCCACTCTTAAATGTACTCATTTAAGAATTTTTCTTTCAAAATATGTGTATCCTACAACTATGTCACAGGCTAAAATGAAGTCTTGAATAGCCTTTCCTCCATTATTCCTAATATAACCATATCCCCCATGTATTGGGTCAAAACTGTCGTTATCTTTACCTACATGACCATTTAGATCTCCACAAATAAAAATCTGTTGGTCGTCTGGAATACCTTGAACCAAGGTGCCCATATCTTCCAAATATTTAGTTTTTGTTTCCACATCTAGTCCTATTTAGGGAGAATAGGTGGTAATGATATTCATTGTTTGATTTCACATGCAAGACTTAATGAGATAACTCAATCCTCACCACACTTTCCCTCTACAACCTTGTCTTTAACTCTTGGTTTTAGAATAATTGAAGTCCACGCTTTATTTGCGCTTTGTGTTTAAAACCCCCAACTGATCTTAGAGCTTTTTTGCTCTTTTTGCTTTTGATAACACTGCACACCACAACTCTCCTCCTTTATATGGGTTTGAGACCGGCCATTTGAGCAAAAGCTCATACAGGCTCTTCCTCCCAATCACTCCTTTCAGTTTTATGTTTGTCTATCACTGAGGAGAAGTTCGTTGATTACTCAAGAAACCTATTTTCCTTGCGAGATTCTTGGTTGTAGACTTGTAGTCTAGTAAATTTGTCAGCACAATGATATCCTGATATATCAGACAAAACAGCTGCCTAGTTTCTTTATACTTCTTCTCTTTTCCTTTTTTACGAAAAAGCTATTGTTTATTCTTGTTGCTGAGAGTAAGATAATTTATTAATGATCTCAATACTAATAATTACAAAATAGGGTTTCTATGCAGTATCTTTCATGCCCGGTTCTCTTGCTAATCATCCTACTGAACTCAGGCATGAATATCAGATAATGTGACATATCGAAAAATTTTACATTCTGTTTCCTATTTTATGGAGAACCCATTTAGAGTACCAATCTGGTGTGGATTGGTGTTTTCTTGTTTCAAGTCTGTATAAGAGTTTTACTATTATAAGTGATAATTTCCATTTGAAGGACTATCATCTCAAATTTGAACTGTCTATGTGGAAATCTCTGTTTCAGGTTTGACAATCCAATCTATCTAATTGCTAAAAGGAAATCTCAACATTTGATAGAGCTTTGTAGATATCTTCAATTAATATGCAGCCTTTCCAATAGTCAGTTATGAAAATTTAGCTTCAATATACTGCATCCTATCTATTAGTATTCTTACATCACACCTTTTTTCAATTGTCTCATTCTGTTGGCGATTCTAAGATGGACACAGCTTATTTAGTTTCCAGAGTAAAATTCCTTTCATTATGGGCTCAAAGTAAACAGATAGTTTTTAGCAACTTTAGGATGACTGTACATGTGATTCTTGTTCTTCTATATCTATGTAGATCATCAAATGAGAAATAATGAAATTCACTTTCACAATGTTGAACCTGAACAAAATTTTCTTTATTTTAGAGTTGTGTATCACATAAATTTCTCATAGGATTCCTATGGGTCATGATCATACCATTGCTAGCCATCCTTGTCTATATCCTTGTCCAGTGTCATTAGTTCCAATGAAAATATCCTTCAAAAGGTTGGCCATTAAAGTGAGTTGCTAATAGCACTCCCCTGCATCCCCAAGAAACAAGAAAATGAAAAAGAAAGTTTCTTTATTAAAACTGGTTGTTTCAGATAGCATTTTCTAAACAAAGAACAATGCTGTTTGAACTGGTATCATTCATTTCTTTCTTGTATATCTACTTAACTGTACGTACAGGTTAAAAAGTGAATGTTGCAGCTCTCCGAGATCTAAGGCATGCAGAGAGAAATTGCGGAGGGACAGACTGAATGAGAGGCATGATCTCTCCTTCTAGATCTCTTTCTTTTGACAAATTCACTTTCTTATGAATTCTCACATCCAAATCTGACATCATATAGGTTCCTCGCATTGAGCTCTGTCCTTGATCCTGGAAGGCCACCAAAAACTGAGAAAGTTGCAATTCTAAGTGATGCTCAAAGGATGCTGATTGAGCTGCGAACTGAAACCCAGAAGCTGAAGGAGTCAAATGAGGAGCTGCAAGAGAAGATAAAAGAACTTAAGGTGTAGTTTTAATTCTAGTGCCACTGAATGTCAGCTGTACTCTCTGATCTTCCATCTGTGCTAGTTTTCTTTGGCTCTCTGTTGAGGCACTTATAAAAGAAAAACCTATGTCTATTCAGGCAGAGAAGAATGAGCTCCGAGA</genome_strand>
        <mrna_strand>GAGAAATTGAAAG-AGGGAATTAGGTCATGGAGGTTGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATAACGGATATTACTTCTGCTGCTTCTGTTACCGTCACTGATTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACAATCTATGCTTCCTCTAATCTCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGAAACAGATTACACATTTGCGGATTCAGAAGTCAGTAAGGAGGCAAGCTCACGAAAGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAAAAGTGAATGGTGCAGCTCTCCGAGATCTAAGGCATGCCGAGAGAAATTGCGGAGGGACAGACTGAATGAGAG...................................................................................GTTCCTCGAATTGAGCTCTGTCCTTGATCCTGGAAGGCCACCAAAAACTGAGAAAGTTGCAATTCTGAGTGATGCTCAAAGGATGCTGATTGAGCTGCGAACTGAAACCCAGAAGCTGAAGGAGTCAAATGAGGAGCTGCAAGAGAAGATAAAAGAACTTAAG.......................................................................................................................GCAGAGAAGAATGAGCTCCGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E306977" ref_strand="+" ref_description="SGN-E306977 [cLEY-11-H23]">
      <seq>ttttgtagtgtgcagagcaaaagggaagggggaaatttgaagaagggaattaggtcatggaggtcgattctagtgggaatcctaattggttatttgattatgagttgatgacggatattacttctgctgcatctgttaccgtcgctgagtttcagtctccggctactattgatttcagctggcctgctcaaacgatctatgcttcttctaatctcattactgaaacagattacacatttgcggattcagaagttagcaaggaggcaagctcacgaaagcggttaaaaagtgaatgttgcagctctccgagatctaaggcatgcagagagaaattgcggagggacagactgaatgagaggttcctcgcattgagctctgtccttgatcctggaaggccaccaaaaactgagaaagttgcaattctaagtgatgctcaaaggatgctgattgagctgcgaactgaaacccagaagctgaaggagtcaaatgaggagctgcaagagaagataaaagaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="48396" stop="44208"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48096" g_stop="47880" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="217" r_length="217" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47879" i_stop="46830" i_length="1050">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46829" g_stop="46767" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="280" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46766" i_stop="44828" i_length="1939">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44827" g_stop="44750" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="358" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44749" i_stop="44667" i_length="83">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.657" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="44666" g_stop="44508" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="359" r_stop="517" r_length="159" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E306977" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>517</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E306977" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48096" e_stop="47880"/>
          <exon e_start="46829" e_stop="46767"/>
          <exon e_start="44827" e_stop="44750"/>
          <exon e_start="44666" e_stop="44508"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGTAGTGTGCAGAGCAAAAGGGAAGGGGGAAATTTGAAGAAGGGAATTAGGTCATGGAGGTCGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATGACGGATATTACTTCTGCTGCATCTGTTACCGTCGCTGAGTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACGATCTATGCTTCTTCTAATCTCATGTGAGTCTGCTCTTCCGCCCTTTTTTAATTCTTGTCAATTTGTTGTACAATTACTCTCATGGTCATTTTTTTTCTTTTCGAATGAGGCTTATATGGTTTGAACACGTGAAAAGGAGAGACAGTGACTTGAGTTGAAGGAGAAGTAAAGGGAGGCTGAAGAAATATTTGGAGAGGTGATTACACAAGACTTGATGCATCTTTAGATTACGAGGGGATGACCTTAGATAGGGATATGGAGGTCATGGATAGTGGTAGATGGGTTATTGGTAGTTGAGTGTTGTCTTACTTACGGAGGGATAGACTTGGTGGTAGTTTGGAGCATAGTATGTGCTTCTCCTTTCATAGCACTAGTATTAGTATTGCTTTGAATTGCTTTCCTTTCCTTTATTTGAACTGAGGATCTAGTGGAAACAATCTCTCTACCTCCACAAAGGTAGGGTAAGGTCTGCCTACACACTACTCTCTACATACTCCACTTGTGGGATTGCACTGAGATTGTTGTTGTTGTTGAATTTTAAAGAACAATAAAGAAAGTTTTATGTTAGGATTACAACTTCTCTTTTGACTTAAAACATGTGAGCTTTGTATATTAAATTCATTGAAATCGAGATGAAGGGGAAGGCGGAAGGTTGTGGTAAATTTGACACCTAGTTTCAAATAATCTTATCATAGAGTAGGAGGTAGCTTCAACAAGGAATTGTCACTTCAGCCAGTCTGTAGTTTGAAAAGTTGTTCCTTTCGAGCATAAGGAAAAAGTGCCTATCACTTTGTGTTGAGGTTATAGATTCCTCTCTAGATTACATTACTTTAAGATATAGAAAGACTGAAATTATGTTCGGTAAATATGTTTAGTAGGATTTATATCTATCAGCTTTTCCACCAAGGTTATTGTTAGTAATAACTATGAAAGACAAATGTCTAATCTTATGGGTGCGTACATGTTTAATGTCTCGAAAGGATGATGCAAAGTAGTGGGACATCAACACTTTACTGAAGCTGGTGCTTTGCTTTTACCATATCCATATTCTGATGGTCATCTATCTCTTTCAGTACTGAAACAGATTACACATTTGCGGATTCAGAAGTTAGCAAGGAGGCAAGCTCACGAAAGCGGTAAATAAATTATCCATTTCTTTTATATCATGGTTTGATAGGTTTGATGAACTCTTTTTATTACATTCTTCTTGTTTTAGAGATCTGGATCTGTTTATATATCCTATGTTCTAGTAAGGAGAAAACCTATTTGGCTATGGTTGTCCACTCTTAAATGTACTCATTTAAGAATTTTTCTTTCAAAATATGTGTATCCTACAACTATGTCACAGGCTAAAATGAAGTCTTGAATAGCCTTTCCTCCATTATTCCTAATATAACCATATCCCCCATGTATTGGGTCAAAACTGTCGTTATCTTTACCTACATGACCATTTAGATCTCCACAAATAAAAATCTGTTGGTCGTCTGGAATACCTTGAACCAAGGTGCCCATATCTTCCAAATATTTAGTTTTTGTTTCCACATCTAGTCCTATTTAGGGAGAATAGGTGGTAATGATATTCATTGTTTGATTTCACATGCAAGACTTAATGAGATAACTCAATCCTCACCACACTTTCCCTCTACAACCTTGTCTTTAACTCTTGGTTTTAGAATAATTGAAGTCCACGCTTTATTTGCGCTTTGTGTTTAAAACCCCCAACTGATCTTAGAGCTTTTTTGCTCTTTTTGCTTTTGATAACACTGCACACCACAACTCTCCTCCTTTATATGGGTTTGAGACCGGCCATTTGAGCAAAAGCTCATACAGGCTCTTCCTCCCAATCACTCCTTTCAGTTTTATGTTTGTCTATCACTGAGGAGAAGTTCGTTGATTACTCAAGAAACCTATTTTCCTTGCGAGATTCTTGGTTGTAGACTTGTAGTCTAGTAAATTTGTCAGCACAATGATATCCTGATATATCAGACAAAACAGCTGCCTAGTTTCTTTATACTTCTTCTCTTTTCCTTTTTTACGAAAAAGCTATTGTTTATTCTTGTTGCTGAGAGTAAGATAATTTATTAATGATCTCAATACTAATAATTACAAAATAGGGTTTCTATGCAGTATCTTTCATGCCCGGTTCTCTTGCTAATCATCCTACTGAACTCAGGCATGAATATCAGATAATGTGACATATCGAAAAATTTTACATTCTGTTTCCTATTTTATGGAGAACCCATTTAGAGTACCAATCTGGTGTGGATTGGTGTTTTCTTGTTTCAAGTCTGTATAAGAGTTTTACTATTATAAGTGATAATTTCCATTTGAAGGACTATCATCTCAAATTTGAACTGTCTATGTGGAAATCTCTGTTTCAGGTTTGACAATCCAATCTATCTAATTGCTAAAAGGAAATCTCAACATTTGATAGAGCTTTGTAGATATCTTCAATTAATATGCAGCCTTTCCAATAGTCAGTTATGAAAATTTAGCTTCAATATACTGCATCCTATCTATTAGTATTCTTACATCACACCTTTTTTCAATTGTCTCATTCTGTTGGCGATTCTAAGATGGACACAGCTTATTTAGTTTCCAGAGTAAAATTCCTTTCATTATGGGCTCAAAGTAAACAGATAGTTTTTAGCAACTTTAGGATGACTGTACATGTGATTCTTGTTCTTCTATATCTATGTAGATCATCAAATGAGAAATAATGAAATTCACTTTCACAATGTTGAACCTGAACAAAATTTTCTTTATTTTAGAGTTGTGTATCACATAAATTTCTCATAGGATTCCTATGGGTCATGATCATACCATTGCTAGCCATCCTTGTCTATATCCTTGTCCAGTGTCATTAGTTCCAATGAAAATATCCTTCAAAAGGTTGGCCATTAAAGTGAGTTGCTAATAGCACTCCCCTGCATCCCCAAGAAACAAGAAAATGAAAAAGAAAGTTTCTTTATTAAAACTGGTTGTTTCAGATAGCATTTTCTAAACAAAGAACAATGCTGTTTGAACTGGTATCATTCATTTCTTTCTTGTATATCTACTTAACTGTACGTACAGGTTAAAAAGTGAATGTTGCAGCTCTCCGAGATCTAAGGCATGCAGAGAGAAATTGCGGAGGGACAGACTGAATGAGAGGCATGATCTCTCCTTCTAGATCTCTTTCTTTTGACAAATTCACTTTCTTATGAATTCTCACATCCAAATCTGACATCATATAGGTTCCTCGCATTGAGCTCTGTCCTTGATCCTGGAAGGCCACCAAAAACTGAGAAAGTTGCAATTCTAAGTGATGCTCAAAGGATGCTGATTGAGCTGCGAACTGAAACCCAGAAGCTGAAGGAGTCAAATGAGGAGCTGCAAGAGAAGATAAAAGAACT</genome_strand>
        <mrna_strand>TTTTGTAGTGTGCAGAGCAAAAGGGAAGGGGGAAATTTGAAGAAGGGAATTAGGTCATGGAGGTCGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATGACGGATATTACTTCTGCTGCATCTGTTACCGTCGCTGAGTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACGATCTATGCTTCTTCTAATCTCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGAAACAGATTACACATTTGCGGATTCAGAAGTTAGCAAGGAGGCAAGCTCACGAAAGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAAAAGTGAATGTTGCAGCTCTCCGAGATCTAAGGCATGCAGAGAGAAATTGCGGAGGGACAGACTGAATGAGAG...................................................................................GTTCCTCGCATTGAGCTCTGTCCTTGATCCTGGAAGGCCACCAAAAACTGAGAAAGTTGCAATTCTAAGTGATGCTCAAAGGATGCTGATTGAGCTGCGAACTGAAACCCAGAAGCTGAAGGAGTCAAATGAGGAGCTGCAAGAGAAGATAAAAGAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E307279" ref_strand="+" ref_description="SGN-E307279 [cLEY-12-I6]">
      <seq>tggttttgtagtgtgcagagcaaaagggaagggggaaatttgaagaagggaattaggtcatggaggtcgattctagtgggaatcctaattggttatttgattatgagttgatgacggatattacttctgctgcatctgttaccgtcgctgagtttcagtctccggctactattgatttcagctggcctgctcaaacgatctatgcttcttctaatctcattactgaaacagattacacatttgcggattcagaagttagcaaggaggcaagctcacgaaagcggttaaaaagtgaatgttgcagctctccgagatctaaggcatgcagagagaaattgcggagggacagactgaatgagaggttcctcgcattgagctctgtccttgatcctggaaggcccccaaaaactgagaaagttgcaattctaagtgatgctcaaaggatgctgattgagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="48399" stop="44272"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48099" g_stop="47880" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="220" r_length="220" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47879" i_stop="46830" i_length="1050">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46829" g_stop="46767" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="283" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46766" i_stop="44828" i_length="1939">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44827" g_stop="44750" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="361" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44749" i_stop="44667" i_length="83">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.657" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="44666" g_stop="44572" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="362" r_stop="456" r_length="95" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E307279" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>456</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E307279" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48099" e_stop="47880"/>
          <exon e_start="46829" e_stop="46767"/>
          <exon e_start="44827" e_stop="44750"/>
          <exon e_start="44666" e_stop="44572"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTTTTGTAGTGTGCAGAGCAAAAGGGAAGGGGGAAATTTGAAGAAGGGAATTAGGTCATGGAGGTCGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATGACGGATATTACTTCTGCTGCATCTGTTACCGTCGCTGAGTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACGATCTATGCTTCTTCTAATCTCATGTGAGTCTGCTCTTCCGCCCTTTTTTAATTCTTGTCAATTTGTTGTACAATTACTCTCATGGTCATTTTTTTTCTTTTCGAATGAGGCTTATATGGTTTGAACACGTGAAAAGGAGAGACAGTGACTTGAGTTGAAGGAGAAGTAAAGGGAGGCTGAAGAAATATTTGGAGAGGTGATTACACAAGACTTGATGCATCTTTAGATTACGAGGGGATGACCTTAGATAGGGATATGGAGGTCATGGATAGTGGTAGATGGGTTATTGGTAGTTGAGTGTTGTCTTACTTACGGAGGGATAGACTTGGTGGTAGTTTGGAGCATAGTATGTGCTTCTCCTTTCATAGCACTAGTATTAGTATTGCTTTGAATTGCTTTCCTTTCCTTTATTTGAACTGAGGATCTAGTGGAAACAATCTCTCTACCTCCACAAAGGTAGGGTAAGGTCTGCCTACACACTACTCTCTACATACTCCACTTGTGGGATTGCACTGAGATTGTTGTTGTTGTTGAATTTTAAAGAACAATAAAGAAAGTTTTATGTTAGGATTACAACTTCTCTTTTGACTTAAAACATGTGAGCTTTGTATATTAAATTCATTGAAATCGAGATGAAGGGGAAGGCGGAAGGTTGTGGTAAATTTGACACCTAGTTTCAAATAATCTTATCATAGAGTAGGAGGTAGCTTCAACAAGGAATTGTCACTTCAGCCAGTCTGTAGTTTGAAAAGTTGTTCCTTTCGAGCATAAGGAAAAAGTGCCTATCACTTTGTGTTGAGGTTATAGATTCCTCTCTAGATTACATTACTTTAAGATATAGAAAGACTGAAATTATGTTCGGTAAATATGTTTAGTAGGATTTATATCTATCAGCTTTTCCACCAAGGTTATTGTTAGTAATAACTATGAAAGACAAATGTCTAATCTTATGGGTGCGTACATGTTTAATGTCTCGAAAGGATGATGCAAAGTAGTGGGACATCAACACTTTACTGAAGCTGGTGCTTTGCTTTTACCATATCCATATTCTGATGGTCATCTATCTCTTTCAGTACTGAAACAGATTACACATTTGCGGATTCAGAAGTTAGCAAGGAGGCAAGCTCACGAAAGCGGTAAATAAATTATCCATTTCTTTTATATCATGGTTTGATAGGTTTGATGAACTCTTTTTATTACATTCTTCTTGTTTTAGAGATCTGGATCTGTTTATATATCCTATGTTCTAGTAAGGAGAAAACCTATTTGGCTATGGTTGTCCACTCTTAAATGTACTCATTTAAGAATTTTTCTTTCAAAATATGTGTATCCTACAACTATGTCACAGGCTAAAATGAAGTCTTGAATAGCCTTTCCTCCATTATTCCTAATATAACCATATCCCCCATGTATTGGGTCAAAACTGTCGTTATCTTTACCTACATGACCATTTAGATCTCCACAAATAAAAATCTGTTGGTCGTCTGGAATACCTTGAACCAAGGTGCCCATATCTTCCAAATATTTAGTTTTTGTTTCCACATCTAGTCCTATTTAGGGAGAATAGGTGGTAATGATATTCATTGTTTGATTTCACATGCAAGACTTAATGAGATAACTCAATCCTCACCACACTTTCCCTCTACAACCTTGTCTTTAACTCTTGGTTTTAGAATAATTGAAGTCCACGCTTTATTTGCGCTTTGTGTTTAAAACCCCCAACTGATCTTAGAGCTTTTTTGCTCTTTTTGCTTTTGATAACACTGCACACCACAACTCTCCTCCTTTATATGGGTTTGAGACCGGCCATTTGAGCAAAAGCTCATACAGGCTCTTCCTCCCAATCACTCCTTTCAGTTTTATGTTTGTCTATCACTGAGGAGAAGTTCGTTGATTACTCAAGAAACCTATTTTCCTTGCGAGATTCTTGGTTGTAGACTTGTAGTCTAGTAAATTTGTCAGCACAATGATATCCTGATATATCAGACAAAACAGCTGCCTAGTTTCTTTATACTTCTTCTCTTTTCCTTTTTTACGAAAAAGCTATTGTTTATTCTTGTTGCTGAGAGTAAGATAATTTATTAATGATCTCAATACTAATAATTACAAAATAGGGTTTCTATGCAGTATCTTTCATGCCCGGTTCTCTTGCTAATCATCCTACTGAACTCAGGCATGAATATCAGATAATGTGACATATCGAAAAATTTTACATTCTGTTTCCTATTTTATGGAGAACCCATTTAGAGTACCAATCTGGTGTGGATTGGTGTTTTCTTGTTTCAAGTCTGTATAAGAGTTTTACTATTATAAGTGATAATTTCCATTTGAAGGACTATCATCTCAAATTTGAACTGTCTATGTGGAAATCTCTGTTTCAGGTTTGACAATCCAATCTATCTAATTGCTAAAAGGAAATCTCAACATTTGATAGAGCTTTGTAGATATCTTCAATTAATATGCAGCCTTTCCAATAGTCAGTTATGAAAATTTAGCTTCAATATACTGCATCCTATCTATTAGTATTCTTACATCACACCTTTTTTCAATTGTCTCATTCTGTTGGCGATTCTAAGATGGACACAGCTTATTTAGTTTCCAGAGTAAAATTCCTTTCATTATGGGCTCAAAGTAAACAGATAGTTTTTAGCAACTTTAGGATGACTGTACATGTGATTCTTGTTCTTCTATATCTATGTAGATCATCAAATGAGAAATAATGAAATTCACTTTCACAATGTTGAACCTGAACAAAATTTTCTTTATTTTAGAGTTGTGTATCACATAAATTTCTCATAGGATTCCTATGGGTCATGATCATACCATTGCTAGCCATCCTTGTCTATATCCTTGTCCAGTGTCATTAGTTCCAATGAAAATATCCTTCAAAAGGTTGGCCATTAAAGTGAGTTGCTAATAGCACTCCCCTGCATCCCCAAGAAACAAGAAAATGAAAAAGAAAGTTTCTTTATTAAAACTGGTTGTTTCAGATAGCATTTTCTAAACAAAGAACAATGCTGTTTGAACTGGTATCATTCATTTCTTTCTTGTATATCTACTTAACTGTACGTACAGGTTAAAAAGTGAATGTTGCAGCTCTCCGAGATCTAAGGCATGCAGAGAGAAATTGCGGAGGGACAGACTGAATGAGAGGCATGATCTCTCCTTCTAGATCTCTTTCTTTTGACAAATTCACTTTCTTATGAATTCTCACATCCAAATCTGACATCATATAGGTTCCTCGCATTGAGCTCTGTCCTTGATCCTGGAAGGCCACCAAAAACTGAGAAAGTTGCAATTCTAAGTGATGCTCAAAGGATGCTGATTGAGC</genome_strand>
        <mrna_strand>TGGTTTTGTAGTGTGCAGAGCAAAAGGGAAGGGGGAAATTTGAAGAAGGGAATTAGGTCATGGAGGTCGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATGACGGATATTACTTCTGCTGCATCTGTTACCGTCGCTGAGTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACGATCTATGCTTCTTCTAATCTCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGAAACAGATTACACATTTGCGGATTCAGAAGTTAGCAAGGAGGCAAGCTCACGAAAGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAAAAGTGAATGTTGCAGCTCTCCGAGATCTAAGGCATGCAGAGAGAAATTGCGGAGGGACAGACTGAATGAGAG...................................................................................GTTCCTCGCATTGAGCTCTGTCCTTGATCCTGGAAGGCCCCCAAAAACTGAGAAAGTTGCAATTCTAAGTGATGCTCAAAGGATGCTGATTGAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E431590" ref_strand="+" ref_description="SGN-E431590 [STM-55-B2]">
      <seq>gttccactctagttgcagtttcctcctcagcaacaaatagtataataccaatgaaaatgatgattgatgaatgatagctactagtttagtcaaaagcagcacaaatcatgctgctcttccttgtccatccaaaacagcgtttactttttgagttagaaaatgcatgtgcagagcaaaagggaagggagaaattgaaagagggaattaggtcatggaggttgattctagtgggaatcctaattggttatttgattatgagttgataacggatattacttctgctgcttctgttaccgtcactgattttcagtctccggctactattgatttcagctggcctgctcaaacaatctatgcttcctctaatctcattgctgaaacagattacacatttgcggattcagaagtcagtaaggaggcaagctcacgaaagaggttaaaaagtgaatggtgcagctctccgagatctaaagcatgccgagagaaattgccgaaggacagactgaatgaaaggttcctccaattgagctctgtccttgatcctgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="48721" stop="44333"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48421" g_stop="48258" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="164" r_length="164" r_score="0.933"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48257" i_stop="48089" i_length="169">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="48088" g_stop="47880" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="165" r_stop="372" r_length="208" r_score="0.947"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="47879" i_stop="46830" i_length="1050">
            <donor d_prob="0.996" d_score="0.96"/>
            <acceptor a_prob="0.991" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46829" g_stop="46767" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="373" r_stop="435" r_length="63" r_score="0.937"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="46766" i_stop="44828" i_length="1939">
            <donor d_prob="0.997" d_score="0.94"/>
            <acceptor a_prob="0.997" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="44827" g_stop="44750" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="436" r_stop="513" r_length="78" r_score="0.923"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="44749" i_stop="44667" i_length="83">
            <donor d_prob="1.000" d_score="0.90"/>
            <acceptor a_prob="0.657" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="44666" g_stop="44633" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="514" r_stop="547" r_length="34" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E431590" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>548</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E431590" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48421" e_stop="48258"/>
          <exon e_start="48088" e_stop="47880"/>
          <exon e_start="46829" e_stop="46767"/>
          <exon e_start="44827" e_stop="44750"/>
          <exon e_start="44666" e_stop="44633"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCCACTCTAGTTGCAGTTTCCTTCTCAGCAACAAATAGTATAATAGCAATGAAAACGATGATTGATGAACGATAGCTACATGTCTAGTGAAAAGTAGCACAAATCATGCTGCTCTTCCTAGTCCAGCCAAAACAGCGTTTACTTTTTGAGTTAGAAAATGCAGTAATGACGAAATACAACTTTGTTAATTCTTCCATTGATGCTGCCGTCAGTTCTCCTCCATCCATATCCACACAAAAAAAATACTTTGTTTTTTTGTTATATATATATATGATGTTGCTATTTCAACTGCTACTGTAGTAGATGATTGCTTATACTTGTGGTTTTGTAGTGTGCAGAGCAAAAGGGAAGGGGGAAATTTGAAGAAGGGAATTAGGTCATGGAGGTCGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATGACGGATATTACTTCTGCTGCATCTGTTACCGTCGCTGAGTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACGATCTATGCTTCTTCTAATCTCATGTGAGTCTGCTCTTCCGCCCTTTTTTAATTCTTGTCAATTTGTTGTACAATTACTCTCATGGTCATTTTTTTTCTTTTCGAATGAGGCTTATATGGTTTGAACACGTGAAAAGGAGAGACAGTGACTTGAGTTGAAGGAGAAGTAAAGGGAGGCTGAAGAAATATTTGGAGAGGTGATTACACAAGACTTGATGCATCTTTAGATTACGAGGGGATGACCTTAGATAGGGATATGGAGGTCATGGATAGTGGTAGATGGGTTATTGGTAGTTGAGTGTTGTCTTACTTACGGAGGGATAGACTTGGTGGTAGTTTGGAGCATAGTATGTGCTTCTCCTTTCATAGCACTAGTATTAGTATTGCTTTGAATTGCTTTCCTTTCCTTTATTTGAACTGAGGATCTAGTGGAAACAATCTCTCTACCTCCACAAAGGTAGGGTAAGGTCTGCCTACACACTACTCTCTACATACTCCACTTGTGGGATTGCACTGAGATTGTTGTTGTTGTTGAATTTTAAAGAACAATAAAGAAAGTTTTATGTTAGGATTACAACTTCTCTTTTGACTTAAAACATGTGAGCTTTGTATATTAAATTCATTGAAATCGAGATGAAGGGGAAGGCGGAAGGTTGTGGTAAATTTGACACCTAGTTTCAAATAATCTTATCATAGAGTAGGAGGTAGCTTCAACAAGGAATTGTCACTTCAGCCAGTCTGTAGTTTGAAAAGTTGTTCCTTTCGAGCATAAGGAAAAAGTGCCTATCACTTTGTGTTGAGGTTATAGATTCCTCTCTAGATTACATTACTTTAAGATATAGAAAGACTGAAATTATGTTCGGTAAATATGTTTAGTAGGATTTATATCTATCAGCTTTTCCACCAAGGTTATTGTTAGTAATAACTATGAAAGACAAATGTCTAATCTTATGGGTGCGTACATGTTTAATGTCTCGAAAGGATGATGCAAAGTAGTGGGACATCAACACTTTACTGAAGCTGGTGCTTTGCTTTTACCATATCCATATTCTGATGGTCATCTATCTCTTTCAGTACTGAAACAGATTACACATTTGCGGATTCAGAAGTTAGCAAGGAGGCAAGCTCACGAAAGCGGTAAATAAATTATCCATTTCTTTTATATCATGGTTTGATAGGTTTGATGAACTCTTTTTATTACATTCTTCTTGTTTTAGAGATCTGGATCTGTTTATATATCCTATGTTCTAGTAAGGAGAAAACCTATTTGGCTATGGTTGTCCACTCTTAAATGTACTCATTTAAGAATTTTTCTTTCAAAATATGTGTATCCTACAACTATGTCACAGGCTAAAATGAAGTCTTGAATAGCCTTTCCTCCATTATTCCTAATATAACCATATCCCCCATGTATTGGGTCAAAACTGTCGTTATCTTTACCTACATGACCATTTAGATCTCCACAAATAAAAATCTGTTGGTCGTCTGGAATACCTTGAACCAAGGTGCCCATATCTTCCAAATATTTAGTTTTTGTTTCCACATCTAGTCCTATTTAGGGAGAATAGGTGGTAATGATATTCATTGTTTGATTTCACATGCAAGACTTAATGAGATAACTCAATCCTCACCACACTTTCCCTCTACAACCTTGTCTTTAACTCTTGGTTTTAGAATAATTGAAGTCCACGCTTTATTTGCGCTTTGTGTTTAAAACCCCCAACTGATCTTAGAGCTTTTTTGCTCTTTTTGCTTTTGATAACACTGCACACCACAACTCTCCTCCTTTATATGGGTTTGAGACCGGCCATTTGAGCAAAAGCTCATACAGGCTCTTCCTCCCAATCACTCCTTTCAGTTTTATGTTTGTCTATCACTGAGGAGAAGTTCGTTGATTACTCAAGAAACCTATTTTCCTTGCGAGATTCTTGGTTGTAGACTTGTAGTCTAGTAAATTTGTCAGCACAATGATATCCTGATATATCAGACAAAACAGCTGCCTAGTTTCTTTATACTTCTTCTCTTTTCCTTTTTTACGAAAAAGCTATTGTTTATTCTTGTTGCTGAGAGTAAGATAATTTATTAATGATCTCAATACTAATAATTACAAAATAGGGTTTCTATGCAGTATCTTTCATGCCCGGTTCTCTTGCTAATCATCCTACTGAACTCAGGCATGAATATCAGATAATGTGACATATCGAAAAATTTTACATTCTGTTTCCTATTTTATGGAGAACCCATTTAGAGTACCAATCTGGTGTGGATTGGTGTTTTCTTGTTTCAAGTCTGTATAAGAGTTTTACTATTATAAGTGATAATTTCCATTTGAAGGACTATCATCTCAAATTTGAACTGTCTATGTGGAAATCTCTGTTTCAGGTTTGACAATCCAATCTATCTAATTGCTAAAAGGAAATCTCAACATTTGATAGAGCTTTGTAGATATCTTCAATTAATATGCAGCCTTTCCAATAGTCAGTTATGAAAATTTAGCTTCAATATACTGCATCCTATCTATTAGTATTCTTACATCACACCTTTTTTCAATTGTCTCATTCTGTTGGCGATTCTAAGATGGACACAGCTTATTTAGTTTCCAGAGTAAAATTCCTTTCATTATGGGCTCAAAGTAAACAGATAGTTTTTAGCAACTTTAGGATGACTGTACATGTGATTCTTGTTCTTCTATATCTATGTAGATCATCAAATGAGAAATAATGAAATTCACTTTCACAATGTTGAACCTGAACAAAATTTTCTTTATTTTAGAGTTGTGTATCACATAAATTTCTCATAGGATTCCTATGGGTCATGATCATACCATTGCTAGCCATCCTTGTCTATATCCTTGTCCAGTGTCATTAGTTCCAATGAAAATATCCTTCAAAAGGTTGGCCATTAAAGTGAGTTGCTAATAGCACTCCCCTGCATCCCCAAGAAACAAGAAAATGAAAAAGAAAGTTTCTTTATTAAAACTGGTTGTTTCAGATAGCATTTTCTAAACAAAGAACAATGCTGTTTGAACTGGTATCATTCATTTCTTTCTTGTATATCTACTTAACTGTACGTACAGGTTAAAAAGTGAATGTTGCAGCTCTCCGAGATCTAAGGCATGCAGAGAGAAATTGCGGAGGGACAGACTGAATGAGAGGCATGATCTCTCCTTCTAGATCTCTTTCTTTTGACAAATTCACTTTCTTATGAATTCTCACATCCAAATCTGACATCATATAGGTTCCTCGCATTGAGCTCTGTCCTTGATCCTGGA</genome_strand>
        <mrna_strand>GTTCCACTCTAGTTGCAGTTTCCTCCTCAGCAACAAATAGTATAATACCAATGAAAATGATGATTGATGAATGATAGCTACTAGTTTAGTCAAAAGCAGCACAAATCATGCTGCTCTTCCTTGTCCATCCAAAACAGCGTTTACTTTTTGAGTTAGAAAATGCA.........................................................................................................................................................................TGTGCAGAGCAAAAGGGAAGGGAGAAA-TTGAAAGAGGGAATTAGGTCATGGAGGTTGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATAACGGATATTACTTCTGCTGCTTCTGTTACCGTCACTGATTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACAATCTATGCTTCCTCTAATCTCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGAAACAGATTACACATTTGCGGATTCAGAAGTCAGTAAGGAGGCAAGCTCACGAAAGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAAAAGTGAATGGTGCAGCTCTCCGAGATCTAAAGCATGCCGAGAGAAATTGCCGAAGGACAGACTGAATGAAAG...................................................................................GTTCCTCCAATTGAGCTCTGTCCTTGATCCTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E459760" ref_strand="+" ref_description="SGN-E459760 [cPRO-28-J4]">
      <seq>caaaagggaagggagaaattgaaaaagggaattaggtcatggaggttgattctagtgggaatcctaattggttatttgattatgagttgataacggatattacttctgctgcttctgttaccgtcactgattttcagtctccggctactattgatttcagctggcctgctcaaacaatctatgcttcctctaatctcattgctgaaacagattacacatttgcggattcagaagtcagtaaggaggcaagctcacgaaagaggttaaaaagtgaatggtgcagctctccgagatctaaggcatgccgagagaaattgcggagggacagactgaatgagaggttcctcgaattgagctctgttcttgatcctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="48379" stop="44449"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48079" g_stop="47880" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="199" r_length="199" r_score="0.950"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47879" i_stop="46830" i_length="1050">
            <donor d_prob="0.996" d_score="0.96"/>
            <acceptor a_prob="0.991" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46829" g_stop="46767" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="200" r_stop="262" r_length="63" r_score="0.937"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46766" i_stop="44828" i_length="1939">
            <donor d_prob="0.997" d_score="0.94"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44827" g_stop="44750" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="263" r_stop="340" r_length="78" r_score="0.974"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44749" i_stop="44667" i_length="83">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.657" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="44666" g_stop="44634" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="341" r_stop="373" r_length="33" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E459760" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>374</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E459760" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48079" e_stop="47880"/>
          <exon e_start="46829" e_stop="46767"/>
          <exon e_start="44827" e_stop="44750"/>
          <exon e_start="44666" e_stop="44634"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAGGGAAGGGGGAAATTTGAAGAAGGGAATTAGGTCATGGAGGTCGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATGACGGATATTACTTCTGCTGCATCTGTTACCGTCGCTGAGTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACGATCTATGCTTCTTCTAATCTCATGTGAGTCTGCTCTTCCGCCCTTTTTTAATTCTTGTCAATTTGTTGTACAATTACTCTCATGGTCATTTTTTTTCTTTTCGAATGAGGCTTATATGGTTTGAACACGTGAAAAGGAGAGACAGTGACTTGAGTTGAAGGAGAAGTAAAGGGAGGCTGAAGAAATATTTGGAGAGGTGATTACACAAGACTTGATGCATCTTTAGATTACGAGGGGATGACCTTAGATAGGGATATGGAGGTCATGGATAGTGGTAGATGGGTTATTGGTAGTTGAGTGTTGTCTTACTTACGGAGGGATAGACTTGGTGGTAGTTTGGAGCATAGTATGTGCTTCTCCTTTCATAGCACTAGTATTAGTATTGCTTTGAATTGCTTTCCTTTCCTTTATTTGAACTGAGGATCTAGTGGAAACAATCTCTCTACCTCCACAAAGGTAGGGTAAGGTCTGCCTACACACTACTCTCTACATACTCCACTTGTGGGATTGCACTGAGATTGTTGTTGTTGTTGAATTTTAAAGAACAATAAAGAAAGTTTTATGTTAGGATTACAACTTCTCTTTTGACTTAAAACATGTGAGCTTTGTATATTAAATTCATTGAAATCGAGATGAAGGGGAAGGCGGAAGGTTGTGGTAAATTTGACACCTAGTTTCAAATAATCTTATCATAGAGTAGGAGGTAGCTTCAACAAGGAATTGTCACTTCAGCCAGTCTGTAGTTTGAAAAGTTGTTCCTTTCGAGCATAAGGAAAAAGTGCCTATCACTTTGTGTTGAGGTTATAGATTCCTCTCTAGATTACATTACTTTAAGATATAGAAAGACTGAAATTATGTTCGGTAAATATGTTTAGTAGGATTTATATCTATCAGCTTTTCCACCAAGGTTATTGTTAGTAATAACTATGAAAGACAAATGTCTAATCTTATGGGTGCGTACATGTTTAATGTCTCGAAAGGATGATGCAAAGTAGTGGGACATCAACACTTTACTGAAGCTGGTGCTTTGCTTTTACCATATCCATATTCTGATGGTCATCTATCTCTTTCAGTACTGAAACAGATTACACATTTGCGGATTCAGAAGTTAGCAAGGAGGCAAGCTCACGAAAGCGGTAAATAAATTATCCATTTCTTTTATATCATGGTTTGATAGGTTTGATGAACTCTTTTTATTACATTCTTCTTGTTTTAGAGATCTGGATCTGTTTATATATCCTATGTTCTAGTAAGGAGAAAACCTATTTGGCTATGGTTGTCCACTCTTAAATGTACTCATTTAAGAATTTTTCTTTCAAAATATGTGTATCCTACAACTATGTCACAGGCTAAAATGAAGTCTTGAATAGCCTTTCCTCCATTATTCCTAATATAACCATATCCCCCATGTATTGGGTCAAAACTGTCGTTATCTTTACCTACATGACCATTTAGATCTCCACAAATAAAAATCTGTTGGTCGTCTGGAATACCTTGAACCAAGGTGCCCATATCTTCCAAATATTTAGTTTTTGTTTCCACATCTAGTCCTATTTAGGGAGAATAGGTGGTAATGATATTCATTGTTTGATTTCACATGCAAGACTTAATGAGATAACTCAATCCTCACCACACTTTCCCTCTACAACCTTGTCTTTAACTCTTGGTTTTAGAATAATTGAAGTCCACGCTTTATTTGCGCTTTGTGTTTAAAACCCCCAACTGATCTTAGAGCTTTTTTGCTCTTTTTGCTTTTGATAACACTGCACACCACAACTCTCCTCCTTTATATGGGTTTGAGACCGGCCATTTGAGCAAAAGCTCATACAGGCTCTTCCTCCCAATCACTCCTTTCAGTTTTATGTTTGTCTATCACTGAGGAGAAGTTCGTTGATTACTCAAGAAACCTATTTTCCTTGCGAGATTCTTGGTTGTAGACTTGTAGTCTAGTAAATTTGTCAGCACAATGATATCCTGATATATCAGACAAAACAGCTGCCTAGTTTCTTTATACTTCTTCTCTTTTCCTTTTTTACGAAAAAGCTATTGTTTATTCTTGTTGCTGAGAGTAAGATAATTTATTAATGATCTCAATACTAATAATTACAAAATAGGGTTTCTATGCAGTATCTTTCATGCCCGGTTCTCTTGCTAATCATCCTACTGAACTCAGGCATGAATATCAGATAATGTGACATATCGAAAAATTTTACATTCTGTTTCCTATTTTATGGAGAACCCATTTAGAGTACCAATCTGGTGTGGATTGGTGTTTTCTTGTTTCAAGTCTGTATAAGAGTTTTACTATTATAAGTGATAATTTCCATTTGAAGGACTATCATCTCAAATTTGAACTGTCTATGTGGAAATCTCTGTTTCAGGTTTGACAATCCAATCTATCTAATTGCTAAAAGGAAATCTCAACATTTGATAGAGCTTTGTAGATATCTTCAATTAATATGCAGCCTTTCCAATAGTCAGTTATGAAAATTTAGCTTCAATATACTGCATCCTATCTATTAGTATTCTTACATCACACCTTTTTTCAATTGTCTCATTCTGTTGGCGATTCTAAGATGGACACAGCTTATTTAGTTTCCAGAGTAAAATTCCTTTCATTATGGGCTCAAAGTAAACAGATAGTTTTTAGCAACTTTAGGATGACTGTACATGTGATTCTTGTTCTTCTATATCTATGTAGATCATCAAATGAGAAATAATGAAATTCACTTTCACAATGTTGAACCTGAACAAAATTTTCTTTATTTTAGAGTTGTGTATCACATAAATTTCTCATAGGATTCCTATGGGTCATGATCATACCATTGCTAGCCATCCTTGTCTATATCCTTGTCCAGTGTCATTAGTTCCAATGAAAATATCCTTCAAAAGGTTGGCCATTAAAGTGAGTTGCTAATAGCACTCCCCTGCATCCCCAAGAAACAAGAAAATGAAAAAGAAAGTTTCTTTATTAAAACTGGTTGTTTCAGATAGCATTTTCTAAACAAAGAACAATGCTGTTTGAACTGGTATCATTCATTTCTTTCTTGTATATCTACTTAACTGTACGTACAGGTTAAAAAGTGAATGTTGCAGCTCTCCGAGATCTAAGGCATGCAGAGAGAAATTGCGGAGGGACAGACTGAATGAGAGGCATGATCTCTCCTTCTAGATCTCTTTCTTTTGACAAATTCACTTTCTTATGAATTCTCACATCCAAATCTGACATCATATAGGTTCCTCGCATTGAGCTCTGTCCTTGATCCTGG</genome_strand>
        <mrna_strand>CAAAAGGGAAGGGAGAAATT-GAAAAAGGGAATTAGGTCATGGAGGTTGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATAACGGATATTACTTCTGCTGCTTCTGTTACCGTCACTGATTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACAATCTATGCTTCCTCTAATCTCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGAAACAGATTACACATTTGCGGATTCAGAAGTCAGTAAGGAGGCAAGCTCACGAAAGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAAAAGTGAATGGTGCAGCTCTCCGAGATCTAAGGCATGCCGAGAGAAATTGCGGAGGGACAGACTGAATGAGAG...................................................................................GTTCCTCGAATTGAGCTCTGTTCTTGATCCTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E302129" ref_strand="+" ref_description="SGN-E302129 [cLEW-19-F11]">
      <seq>cctcgtgcctttaaatttgaagaagggaattaggtcatgggggtcgattctagtgggaatcctaattggttatttgattatgagttgatgacggatattacttctgctgcatctgttaccgtcgctgagtttcagtctccggctactattgatttcagctggcctgctcaaacgatctatgcttcttctaatctcattactgaaacagattacacatttgcggattcagaagttagcaaggaggcaagctcacgaaagcggtaaataaattatccatttcttttatatcatggtttgataggtttgatgaactctttttattacattcttcttgttttagagatctggatctgtttatatatcctatgttctagtaaggagaaaacctatttggctatggttgtccactcttaaatgtactcatttaagaatttttctttcaaaatatgtgtatcctacaactatgtcacaggctaaaatgaagtcttgaatagcctttcctccattattcctaatataaccatatcccccatgtattgggtcaaaactgtcgttatctttacctacatgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="48364" stop="46155"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48076" g_stop="47880" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="197" r_length="197" r_score="0.939"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47879" i_stop="46830" i_length="1050">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46829" g_stop="46455" g_length="375"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="572" r_length="375" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E302129" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>572</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E302129" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48076" e_stop="47880"/>
          <exon e_start="46829" e_stop="46455"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGGAAGGGGGAAATTTGAAGAAGGGAATTAGGTCATGGAGGTCGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATGACGGATATTACTTCTGCTGCATCTGTTACCGTCGCTGAGTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACGATCTATGCTTCTTCTAATCTCATGTGAGTCTGCTCTTCCGCCCTTTTTTAATTCTTGTCAATTTGTTGTACAATTACTCTCATGGTCATTTTTTTTCTTTTCGAATGAGGCTTATATGGTTTGAACACGTGAAAAGGAGAGACAGTGACTTGAGTTGAAGGAGAAGTAAAGGGAGGCTGAAGAAATATTTGGAGAGGTGATTACACAAGACTTGATGCATCTTTAGATTACGAGGGGATGACCTTAGATAGGGATATGGAGGTCATGGATAGTGGTAGATGGGTTATTGGTAGTTGAGTGTTGTCTTACTTACGGAGGGATAGACTTGGTGGTAGTTTGGAGCATAGTATGTGCTTCTCCTTTCATAGCACTAGTATTAGTATTGCTTTGAATTGCTTTCCTTTCCTTTATTTGAACTGAGGATCTAGTGGAAACAATCTCTCTACCTCCACAAAGGTAGGGTAAGGTCTGCCTACACACTACTCTCTACATACTCCACTTGTGGGATTGCACTGAGATTGTTGTTGTTGTTGAATTTTAAAGAACAATAAAGAAAGTTTTATGTTAGGATTACAACTTCTCTTTTGACTTAAAACATGTGAGCTTTGTATATTAAATTCATTGAAATCGAGATGAAGGGGAAGGCGGAAGGTTGTGGTAAATTTGACACCTAGTTTCAAATAATCTTATCATAGAGTAGGAGGTAGCTTCAACAAGGAATTGTCACTTCAGCCAGTCTGTAGTTTGAAAAGTTGTTCCTTTCGAGCATAAGGAAAAAGTGCCTATCACTTTGTGTTGAGGTTATAGATTCCTCTCTAGATTACATTACTTTAAGATATAGAAAGACTGAAATTATGTTCGGTAAATATGTTTAGTAGGATTTATATCTATCAGCTTTTCCACCAAGGTTATTGTTAGTAATAACTATGAAAGACAAATGTCTAATCTTATGGGTGCGTACATGTTTAATGTCTCGAAAGGATGATGCAAAGTAGTGGGACATCAACACTTTACTGAAGCTGGTGCTTTGCTTTTACCATATCCATATTCTGATGGTCATCTATCTCTTTCAGTACTGAAACAGATTACACATTTGCGGATTCAGAAGTTAGCAAGGAGGCAAGCTCACGAAAGCGGTAAATAAATTATCCATTTCTTTTATATCATGGTTTGATAGGTTTGATGAACTCTTTTTATTACATTCTTCTTGTTTTAGAGATCTGGATCTGTTTATATATCCTATGTTCTAGTAAGGAGAAAACCTATTTGGCTATGGTTGTCCACTCTTAAATGTACTCATTTAAGAATTTTTCTTTCAAAATATGTGTATCCTACAACTATGTCACAGGCTAAAATGAAGTCTTGAATAGCCTTTCCTCCATTATTCCTAATATAACCATATCCCCCATGTATTGGGTCAAAACTGTCGTTATCTTTACCTACATGAC</genome_strand>
        <mrna_strand>CCTCGTGCCTTTAAATTTGAAGAAGGGAATTAGGTCATGGGGGTCGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATGACGGATATTACTTCTGCTGCATCTGTTACCGTCGCTGAGTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACGATCTATGCTTCTTCTAATCTCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGAAACAGATTACACATTTGCGGATTCAGAAGTTAGCAAGGAGGCAAGCTCACGAAAGCGGTAAATAAATTATCCATTTCTTTTATATCATGGTTTGATAGGTTTGATGAACTCTTTTTATTACATTCTTCTTGTTTTAGAGATCTGGATCTGTTTATATATCCTATGTTCTAGTAAGGAGAAAACCTATTTGGCTATGGTTGTCCACTCTTAAATGTACTCATTTAAGAATTTTTCTTTCAAAATATGTGTATCCTACAACTATGTCACAGGCTAAAATGAAGTCTTGAATAGCCTTTCCTCCATTATTCCTAATATAACCATATCCCCCATGTATTGGGTCAAAACTGTCGTTATCTTTACCTACATGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E464632" ref_strand="+" ref_description="SGN-E464632 [cPRO-18-J11]">
      <seq>gttccactctagttgcagtttcctcctcagcaacaaatagtataataccaatgaaaatgatgattgatgaatgatagctactagtttagtcaaaagcagcacaaatcatgctgctcttccttgtccatccaaaacagcgtttactttttgagttagaaaatgcatgtgcagagcaaaagggaagggagaaattgaaagagggaattaggtcatggaggttgattctagtgggaatcctaattggttatttgattatgagttgataacggatattacttctgctgcttctgttaccgtcactgattttcagtctccggctactaatgatttcagctggcctgctcaaacaatctatgcttcctctaatctcattgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="48721" stop="47577"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48421" g_stop="48258" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="164" r_length="164" r_score="0.933"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48257" i_stop="48089" i_length="169">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="48088" g_stop="47880" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="165" r_stop="372" r_length="208" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E464632" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>373</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E464632" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48421" e_stop="48258"/>
          <exon e_start="48088" e_stop="47880"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCCACTCTAGTTGCAGTTTCCTTCTCAGCAACAAATAGTATAATAGCAATGAAAACGATGATTGATGAACGATAGCTACATGTCTAGTGAAAAGTAGCACAAATCATGCTGCTCTTCCTAGTCCAGCCAAAACAGCGTTTACTTTTTGAGTTAGAAAATGCAGTAATGACGAAATACAACTTTGTTAATTCTTCCATTGATGCTGCCGTCAGTTCTCCTCCATCCATATCCACACAAAAAAAATACTTTGTTTTTTTGTTATATATATATATGATGTTGCTATTTCAACTGCTACTGTAGTAGATGATTGCTTATACTTGTGGTTTTGTAGTGTGCAGAGCAAAAGGGAAGGGGGAAATTTGAAGAAGGGAATTAGGTCATGGAGGTCGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATGACGGATATTACTTCTGCTGCATCTGTTACCGTCGCTGAGTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACGATCTATGCTTCTTCTAATCTCAT</genome_strand>
        <mrna_strand>GTTCCACTCTAGTTGCAGTTTCCTCCTCAGCAACAAATAGTATAATACCAATGAAAATGATGATTGATGAATGATAGCTACTAGTTTAGTCAAAAGCAGCACAAATCATGCTGCTCTTCCTTGTCCATCCAAAACAGCGTTTACTTTTTGAGTTAGAAAATGCA.........................................................................................................................................................................TGTGCAGAGCAAAAGGGAAGGGAGAAA-TTGAAAGAGGGAATTAGGTCATGGAGGTTGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATAACGGATATTACTTCTGCTGCTTCTGTTACCGTCACTGATTTTCAGTCTCCGGCTACTAATGATTTCAGCTGGCCTGCTCAAACAATCTATGCTTCCTCTAATCTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E620275" ref_strand="+" ref_description="SGN-E620275 [70974]">
      <seq>aacagattgaaaaagcagaactaaaagttacaatactactaataacagcctaggttagctcatatatacaacaactactcagtaactcatcattttctttanccaaacccagaaaagtgaaaaaaagagaagaaaatgtgttatgtggggaaagcaaccaagatcttcatcttcattgtcactgttctagttgttactggtcttatattgggatttgggttacttaggcatcacaatcagaagggggaaaacaaatgttctggtgattcttgtgaccaaaatcagtaccaaagccccatcgtttacccaccacctaccacctccactaacaccaataacccaatttcaccattgccaatttcaactccttcacagcctaatactccaaatcctaacttaaccccaccancaccagataatcctacccctgaaactcctaatttaacaccaccggcgcctccagacaccgtggtctccactccgccgccgcttccgccgccagctgtctcattaactccgccggcaacattgagccctcccagccccgtgacggtgtcgccaggtccagtgcaatcttagatttttctgatcttctcatctgttacccttaatttcgattaacattttagtgttttgtatagaaaaatttggcatctcgctgctactggttttcggtagcagatttgattttttttgcagacaattttgtcctccattgtaatttttagtatgaatctgattcttgcttattctgctaagccattgaacaattttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="64476" stop="63168"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64155" g_stop="63451" g_length="705"/>
          <reference_exon_boundary r_type="cDNA" r_start="90" r_stop="775" r_length="686" r_score="0.906"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E620275" ref_strand="+">
        <total_alignment_score>0.906</total_alignment_score>
        <cumulative_length_of_scored_exons>705</cumulative_length_of_scored_exons>
        <coverage percentage="0.910" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E620275" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64155" e_stop="63451"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAATTTCTGAACCAAACCCAGAAAAGTGAAAAGAAGAAAGGAAAAAAAATGTGTTATGTGGGTAAAGCTACCAAGATCTTCATCTTCATTGTCACTGTTCTAGTTGTTACTGGTCTTATATTGGGATTTGGGTTACTTAGGCATCACAATCAGAAAGGGGAAAACAAATGTTCTGGTGATTCTTGTGACCAAAATCAGTACCAAAGCCCCATTGTTTACCCACCCCCTACCACCTCCACTAACACCAATAACCCAATTTCACCATTGCCAATTTCAACTCCTTCACAGCCAAATACTCCAAATCCTAACTTACCCCAACCACCACCACCACCCTCACCAGATAATCCTACCCCTGAAACACCTAATTTAACACCACCGCCGCCTCCAGACACCGTGGTCTCCACTCCGCCGCCGCTTCCGCCGCCAGCTGTCTCATTAACTCCGCCGCCAACATTGAGCCCTCCCAGCCCCGTAACGGTGTCGCCAGGTCCAGTGCAATCTTAGAGTTTTCTGA---TCT--TC-GTTACCATTAATTTCGATTAACATTTTAGTATTTTGTATAGAAAAATTTGGCATCTCGCTGCTACTGGTTTTTGGTAGCAGATTTGATTTTTTTTTTTTTGCAGACAATTTTGTTCTCCATTGTAATTTTTAGTATCATGAATCTGATTCTTGCTTATTCAGCTGAGATCATTGAACAATTTTT</genome_strand>
        <mrna_strand>TCATTTTCTTTANCCAAACCCAGAAAAGTGAAAA-AA-AGA-G-AAGAAAATGTGTTATGTGGGGAAAGCAACCAAGATCTTCATCTTCATTGTCACTGTTCTAGTTGTTACTGGTCTTATATTGGGATTTGGGTTACTTAGGCATCACAATCAGAAGGGGGAAAACAAATGTTCTGGTGATTCTTGTGACCAAAATCAGTACCAAAGCCCCATCGTTTACCCACCACCTACCACCTCCACTAACACCAATAACCCAATTTCACCATTGCCAATTTCAACTCCTTCACAGCCTAATACTCCAAATCCTAACTT------A--ACC-CCACCA---NCACCAGATAATCCTACCCCTGAAACTCCTAATTTAACACCACCGGCGCCTCCAGACACCGTGGTCTCCACTCCGCCGCCGCTTCCGCCGCCAGCTGTCTCATTAACTCCGCCGGCAACATTGAGCCCTCCCAGCCCCGTGACGGTGTCGCCAGGTCCAGTGCAATCTTAGATTTTTCTGATCTTCTCATCTGTTACCCTTAATTTCGATTAACATTTTAGTGTTTTGTATAGAAAAATTTGGCATCTCGCTGCTACTGGTTTTCGGTAGCAGATTTGA-----TTTTTTTTGCAGACAATTTTGTCCTCCATTGTAATTTTTAG--T-ATGAATCTGATTCTTGCTTATTCTGCTAAG-CCATTGAACAATTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E262879" ref_strand="+" ref_description="SGN-E262879 [cLEG-59-O10]">
      <seq>tttttcaaaatcaaattttgggatccacacatataaaaatattgcagtccacaaaaaagtgttccataaggattatttgattctttgtgatgaatgtcttttaccttagatattttaaacattttttcttttgcaatgttgaaattaatattgttgtaaattttttaaagcccagaaacaggaaatttgttgatattttagatgaatatcagtacgtctagcattggaacttcaaatttaggtgttttacctgaggtaatgggatttccacaccaaaaattgttgattaagaaatttcatttggcaagaaagcaacttctccggcaaaatattacattttcttgtaatcgaaagactggaattactcgagccattgcaccagaagcaacaaaggttacgggtccaacattgagcactgtccctttagccaactatgtgcctgtttatgtaatgcttccattagatgttatttcaattgacaatgtatttcgggaccnagttaagtgtgagaagcagttncaggaactgagagaaagcggtgttgatgggatcatggtggatgtctggtggggaaatagtagaggccaatgggccccgggctatatgattggtctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="70899" stop="73112"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71199" g_stop="71591" g_length="393"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="393" r_length="393" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71592" i_stop="72496" i_length="905">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72497" g_stop="72562" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="394" r_stop="459" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72563" i_stop="72657" i_length="95">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72658" g_stop="72812" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="460" r_stop="616" r_length="157" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E262879" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>614</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E262879" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71199" e_stop="71591"/>
          <exon e_start="72497" e_stop="72562"/>
          <exon e_start="72658" e_stop="72812"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTCAAAATCAAATTTTGGGATCCACACATATAAAAATATTGCAGTCCACAAAAAAGTGTTCCATAAGGATTATTTGATTCTTTGTGATGAATGTCTTTTACCTTAGATATTTTAAACATTTTTTCTTTTGCAATGTTGAAATTAATATTGTTGTAAATTTTTTAAAGCCCAGAAACAGGAAATTTGTTGATATTTTAGATGAATATCAGTACGTCTAGCATTGGAACTTCAAATTTAGGTGTTTTACCTGAGGTAATGGGATTTCCACACCAAAAATTGTTGATTAAGAAATTTCATTTGGCAAGAAAACAACTTCTCCGGCAAAATATTACATTTTCTTGTAATCGAAAGACTGGAATTACTCGAGCCATTGCACCAGAAGCAACAAAGGTAATAAATTTTCCTCTGTTCTTTTAATTTGGAGTCTTTTGTGTGCCTGTTTTGTTGAGAGGTGATTAGACAGCACACAGCATAACTGTGTGAGGATATGACCTAGATAGGAGTTTTTGGATGTTGAGGATTAGGTAAAAAGATTAGTAGCTAGTCGAGCATCGTCTAGTTTACCTTCTATGTTTTGTTATTATTGATTTCTTAATATTTCACTCTTCGATTGTAGTATTACATGTTGTTTTCTTTGATTTGATTGTTGTATTATTTGTTGTTGCTACTTCTCTTTTCTCCATTGTTTTTTGTACCTGTTTTAAGTCGAGGATCTATTGGAAATAGTCAGTCTAGCTATCTTGACTAGGTAGGACTAGGAGTAATGCTATGTATTCTCTATCTTCCAAGATGCTATTTGTGGGATTAGATTGGGTATGTTGTTGTTGTGTGCAGAGACTGTGAACGAGAAGTGATTTATGTGTGCGTTGAATGATTTTGGGCACTGATCATCTACCCTTATGATATGTGTCTATGGTAGTTGTATAAGAAACTGATAGCTTTTGTTAGTTTAGGAGTAGCATTTATCAATAGTAAAAAGCTTTCCTTAATGGTGGTAGTGCAGGTTGAAAATATTCTGTTATCGTCGAGGGGTCTGTAGTCATGTTTTTCTTAATCTAATCTTTGTTTTAAAGTGAATTCTGTTTGATAGTAATTCCTTGACAGTCCATTCTAGGCAAGTAGTATATTTTGACTTGGCTATTTCCGAAGATATCCAGGGAGGTAGAGAAACAATTATGCGTATAGTTTACAAAACAGAACGGAGATAAAATACCAAGTTGCAGCCTCTACATTGTCTTTAGAGACTTCGATATTTCATAGAAGAACGACTTCTCTTGGTTTCTCTTGTTATGCAGGTTACGGGTCCAACATTGAGCACTGTCCCTTTAGCCAACTATGTGCCTGTTTATGTAATGCTTCCAGTAAGTCATAAACCTGTCGTCGATCATGAAACTGCATTGATGCAGATGCTAGTTTTAACACTTCCCGTTTCTTCTTTTCTGCTGGTGACAAACAGTTAGATGTTATTTCAATTGACAATGTATTTCGGGACCAAGTTAAGTGTGAGAAGCAGTTCAAGGAACTGAGAGAAGCGGGTGTTGATGGGATCATGGTGGATGTCTGGTGGGG-AATAGTAGAGGCCAAT-GGCCCCGGGCTATATGATTGGTCTGC</genome_strand>
        <mrna_strand>TTTTTCAAAATCAAATTTTGGGATCCACACATATAAAAATATTGCAGTCCACAAAAAAGTGTTCCATAAGGATTATTTGATTCTTTGTGATGAATGTCTTTTACCTTAGATATTTTAAACATTTTTTCTTTTGCAATGTTGAAATTAATATTGTTGTAAATTTTTTAAAGCCCAGAAACAGGAAATTTGTTGATATTTTAGATGAATATCAGTACGTCTAGCATTGGAACTTCAAATTTAGGTGTTTTACCTGAGGTAATGGGATTTCCACACCAAAAATTGTTGATTAAGAAATTTCATTTGGCAAGAAAGCAACTTCTCCGGCAAAATATTACATTTTCTTGTAATCGAAAGACTGGAATTACTCGAGCCATTGCACCAGAAGCAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACGGGTCCAACATTGAGCACTGTCCCTTTAGCCAACTATGTGCCTGTTTATGTAATGCTTCCA...............................................................................................TTAGATGTTATTTCAATTGACAATGTATTTCGGGACCNAGTTAAGTGTGAGAAGCAGTTNCAGGAACTGAGAGAAAGCGGTGTTGATGGGATCATGGTGGATGTCTGGTGGGGAAATAGTAGAGGCCAATGGGCCCCGGGCTATATGATTGGTCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E248832" ref_strand="+" ref_description="SGN-E248832 [cLEF-49-G9]">
      <seq>aaaaatattgcagtccacaaaaaagtgttccataaagattatttgattctttgtgatgaatgtcttttaccttagatattttaaacattttttcttttgcaatgttgaaattaatattgttgtaaattttttaaagcccagaaacaggaaatttgttgatattttagatgaatatcagtacgtctagcattggaacttcaaatttaggtgttttacctgaggtaatgggatttccacaccaaaaattgttgattaagaaatttcatttggcaagaaagcaacttctccggcaaaatattacattttcttgtaatcgaaagactggaattactcgagccattgcaccagaagcaacaaaggtaataaattttcctctgttcttttaatttggagtcttttgtgtgcctgttttgttgagaggtgattagacagcacacagcataactgtgtgaggatatgacctanataggagtttttggatgttgaggattaggtaaaaagattagtagctagtcgagcatcgtctagtttaccttctatgttttgttattattgatttcttaatatttcactcttcgattgtagtattacatgttgttttctttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="70933" stop="72138"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71233" g_stop="71838" g_length="606"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="606" r_length="606" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E248832" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>606</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E248832" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71233" e_stop="71838"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAATATTGCAGTCCACAAAAAAGTGTTCCATAAGGATTATTTGATTCTTTGTGATGAATGTCTTTTACCTTAGATATTTTAAACATTTTTTCTTTTGCAATGTTGAAATTAATATTGTTGTAAATTTTTTAAAGCCCAGAAACAGGAAATTTGTTGATATTTTAGATGAATATCAGTACGTCTAGCATTGGAACTTCAAATTTAGGTGTTTTACCTGAGGTAATGGGATTTCCACACCAAAAATTGTTGATTAAGAAATTTCATTTGGCAAGAAAACAACTTCTCCGGCAAAATATTACATTTTCTTGTAATCGAAAGACTGGAATTACTCGAGCCATTGCACCAGAAGCAACAAAGGTAATAAATTTTCCTCTGTTCTTTTAATTTGGAGTCTTTTGTGTGCCTGTTTTGTTGAGAGGTGATTAGACAGCACACAGCATAACTGTGTGAGGATATGACCTAGATAGGAGTTTTTGGATGTTGAGGATTAGGTAAAAAGATTAGTAGCTAGTCGAGCATCGTCTAGTTTACCTTCTATGTTTTGTTATTATTGATTTCTTAATATTTCACTCTTCGATTGTAGTATTACATGTTGTTTTCTTTG</genome_strand>
        <mrna_strand>AAAAATATTGCAGTCCACAAAAAAGTGTTCCATAAAGATTATTTGATTCTTTGTGATGAATGTCTTTTACCTTAGATATTTTAAACATTTTTTCTTTTGCAATGTTGAAATTAATATTGTTGTAAATTTTTTAAAGCCCAGAAACAGGAAATTTGTTGATATTTTAGATGAATATCAGTACGTCTAGCATTGGAACTTCAAATTTAGGTGTTTTACCTGAGGTAATGGGATTTCCACACCAAAAATTGTTGATTAAGAAATTTCATTTGGCAAGAAAGCAACTTCTCCGGCAAAATATTACATTTTCTTGTAATCGAAAGACTGGAATTACTCGAGCCATTGCACCAGAAGCAACAAAGGTAATAAATTTTCCTCTGTTCTTTTAATTTGGAGTCTTTTGTGTGCCTGTTTTGTTGAGAGGTGATTAGACAGCACACAGCATAACTGTGTGAGGATATGACCTANATAGGAGTTTTTGGATGTTGAGGATTAGGTAAAAAGATTAGTAGCTAGTCGAGCATCGTCTAGTTTACCTTCTATGTTTTGTTATTATTGATTTCTTAATATTTCACTCTTCGATTGTAGTATTACATGTTGTTTTCTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E369565" ref_strand="+" ref_description="SGN-E369565 [TUS-25-H14]">
      <seq>aaaaatattgcagtccacaaaaaagtgttccataaggattatttgattctttgtgatgaatgtcttttaccttagatattttaaacattttttcttttgcaatgttgaaattaatattgttgtaaattttttaaagcccagaaacaggaaatttgttgatattttagatgaatatcagtacgtctagcattggaacttcaaatttaggtgttttacctgaggtaatgggatttccacaccaaaaattgttgattaagaaatttcatttggcaagaaagcaacttctccggcaaaatattacattttcttgtaatcgaaagactggaattactcgagccattgcaccagaagcaacaaaggtaataaattttcctctgttcttttaatttggagtcttttgtgtgcctgttttgttgagaggtgattagacagcacacagcataactgtgtgaggatatgacctagataggagtttttggatgttgaggattaggtaaaaagattagtagctagtcgagcatcgtctagtttaccttctatgttttgttattattgattttcttaatattttcactcttcgattgtagtattacatgttgttttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="70933" stop="72134"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71233" g_stop="71834" g_length="602"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="604" r_length="604" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E369565" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>602</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E369565" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71233" e_stop="71834"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAATATTGCAGTCCACAAAAAAGTGTTCCATAAGGATTATTTGATTCTTTGTGATGAATGTCTTTTACCTTAGATATTTTAAACATTTTTTCTTTTGCAATGTTGAAATTAATATTGTTGTAAATTTTTTAAAGCCCAGAAACAGGAAATTTGTTGATATTTTAGATGAATATCAGTACGTCTAGCATTGGAACTTCAAATTTAGGTGTTTTACCTGAGGTAATGGGATTTCCACACCAAAAATTGTTGATTAAGAAATTTCATTTGGCAAGAAAACAACTTCTCCGGCAAAATATTACATTTTCTTGTAATCGAAAGACTGGAATTACTCGAGCCATTGCACCAGAAGCAACAAAGGTAATAAATTTTCCTCTGTTCTTTTAATTTGGAGTCTTTTGTGTGCCTGTTTTGTTGAGAGGTGATTAGACAGCACACAGCATAACTGTGTGAGGATATGACCTAGATAGGAGTTTTTGGATGTTGAGGATTAGGTAAAAAGATTAGTAGCTAGTCGAGCATCGTCTAGTTTACCTTCTATGTTTTGTTATTATTGA-TTTCTTAATA-TTTCACTCTTCGATTGTAGTATTACATGTTGTTTTC</genome_strand>
        <mrna_strand>AAAAATATTGCAGTCCACAAAAAAGTGTTCCATAAGGATTATTTGATTCTTTGTGATGAATGTCTTTTACCTTAGATATTTTAAACATTTTTTCTTTTGCAATGTTGAAATTAATATTGTTGTAAATTTTTTAAAGCCCAGAAACAGGAAATTTGTTGATATTTTAGATGAATATCAGTACGTCTAGCATTGGAACTTCAAATTTAGGTGTTTTACCTGAGGTAATGGGATTTCCACACCAAAAATTGTTGATTAAGAAATTTCATTTGGCAAGAAAGCAACTTCTCCGGCAAAATATTACATTTTCTTGTAATCGAAAGACTGGAATTACTCGAGCCATTGCACCAGAAGCAACAAAGGTAATAAATTTTCCTCTGTTCTTTTAATTTGGAGTCTTTTGTGTGCCTGTTTTGTTGAGAGGTGATTAGACAGCACACAGCATAACTGTGTGAGGATATGACCTAGATAGGAGTTTTTGGATGTTGAGGATTAGGTAAAAAGATTAGTAGCTAGTCGAGCATCGTCTAGTTTACCTTCTATGTTTTGTTATTATTGATTTTCTTAATATTTTCACTCTTCGATTGTAGTATTACATGTTGTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E355733" ref_strand="+" ref_description="SGN-E355733 [cLHT-18-H3]">
      <seq>agcagtgtccctttagccaactatgtgcctgtttatgtaatgcttccattagatgttatttcaattgacaatgtttttcgggaccaagttaagtgtgagaagcagttcaaggaactgagagaagccggtgttgatgggatcatggtggatgtctggtggggaattgtagaggccaatggccccgggctatatgattggtctgcgtataggagtttgttccaacttgttcaaaagattggcctcaaaatacaagctattatgttattccaccaatgtggtggcaatataggagatgatgttttcattcctatacccaaatgggtactagctatcggagaaaacaaccctgatattttctatactaatcgtactggtacaaggaacaaagaatgcctctcacttgccgtggataaccaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="72215" stop="73327"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72515" g_stop="72562" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="48" r_length="48" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72563" i_stop="72657" i_length="95">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72658" g_stop="73027" g_length="370"/>
          <reference_exon_boundary r_type="cDNA" r_start="49" r_stop="418" r_length="370" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E355733" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>418</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E355733" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72515" e_stop="72562"/>
          <exon e_start="72658" e_stop="73027"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCACTGTCCCTTTAGCCAACTATGTGCCTGTTTATGTAATGCTTCCAGTAAGTCATAAACCTGTCGTCGATCATGAAACTGCATTGATGCAGATGCTAGTTTTAACACTTCCCGTTTCTTCTTTTCTGCTGGTGACAAACAGTTAGATGTTATTTCAATTGACAATGTATTTCGGGACCAAGTTAAGTGTGAGAAGCAGTTCAAGGAACTGAGAGAAGCGGGTGTTGATGGGATCATGGTGGATGTCTGGTGGGGAATAGTAGAGGCCAATGGCCCCGGGCTATATGATTGGTCTGCGTATAGGAGTTTGTTCCAACTTGTTCAAAAGATTGGCCTCAAAATACAAGCTATTATGTCATTCCACCAATGTGGTGGCAATATAGGAGATGATGTTTTCATTCCTATACCCAAATGGGTACTAGCTATCGGAGAAAACAACCCTGATATTTTCTATACTAATCGGACTGGTACAAGGAACAAAGAATGCCTCTCACTTGCCGTGGATAACCAAC</genome_strand>
        <mrna_strand>AGCAGTGTCCCTTTAGCCAACTATGTGCCTGTTTATGTAATGCTTCCA...............................................................................................TTAGATGTTATTTCAATTGACAATGTTTTTCGGGACCAAGTTAAGTGTGAGAAGCAGTTCAAGGAACTGAGAGAAGCCGGTGTTGATGGGATCATGGTGGATGTCTGGTGGGGAATTGTAGAGGCCAATGGCCCCGGGCTATATGATTGGTCTGCGTATAGGAGTTTGTTCCAACTTGTTCAAAAGATTGGCCTCAAAATACAAGCTATTATGTTATTCCACCAATGTGGTGGCAATATAGGAGATGATGTTTTCATTCCTATACCCAAATGGGTACTAGCTATCGGAGAAAACAACCCTGATATTTTCTATACTAATCGTACTGGTACAAGGAACAAAGAATGCCTCTCACTTGCCGTGGATAACCAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E342633" ref_strand="+" ref_description="SGN-E342633 [cTOF-7-D1]">
      <seq>tgatgttttcattcctatacccaaatgggtactagctatcggagaaaacaaccctgatattttctatactaatcggactggtacaaggaacaaagaatgcctctcacttgccgtggataaccaacctctatttgaaggtcgaactgctatccagatttacagcgactacatgaggagctttagagagaacatgtccgacttcttggaagctggaagcatagtagacatagaggtaggacttggtcctgccggtgagcttagatatccatcgtacactcagtctcaaggatggaaattccccggcattggagaatttcagtgctatgacaagtacatgagaacagatttcaagggggcagcaacaaaggcaggccactcagagtgggatcttccagatgatgcaggaacatataataatgtacccgccgaaacaggattctttggaccaaatggtacataccttaccgagaaagggaagttctttttgacctgntactctagcaagctactgcttcacggagatcagatccttgatgaagcaaacaaagctttcctgggatgcaaagtgaagctatcagctaaagtagctggaattcactggtggtacaaagatgccagccatgctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="72603" stop="74327"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72903" g_stop="73057" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="154" r_length="154" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73058" i_stop="73156" i_length="99">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.827" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="73157" g_stop="73321" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="319" r_length="165" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73322" i_stop="73608" i_length="287">
            <donor d_prob="0.932" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73609" g_stop="73872" g_length="264"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="583" r_length="264" r_score="0.996"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="73873" i_stop="73983" i_length="111">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.835" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="73984" g_stop="74027" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="584" r_stop="627" r_length="44" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E342633" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>628</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E342633" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72903" e_stop="73057"/>
          <exon e_start="73157" e_stop="73321"/>
          <exon e_start="73609" e_stop="73872"/>
          <exon e_start="73984" e_stop="74027"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATGTTTTCATTCCTATACCCAAATGGGTACTAGCTATCGGAGAAAACAACCCTGATATTTTCTATACTAATCGGACTGGTACAAGGAACAAAGAATGCCTCTCACTTGCCGTGGATAACCAACCTCTATTTGAAGGGTCGAACTGCTATTCAGCTAACTCTCAGAAGGATCAATCCCAATTTTATGCTCAGATACGGATAGACGTATTGTATTATGAGCTTAGGCTCTAACTAAAATTCCTGATGCATTTAGATTTACAGCGACTACATGAGGAGCTTTAGAGAGAACATGTCCGACTTCTTGGAAGCTGGAAGCATAGTAGACATAGAGGTAGGACTTGGTCCTGCCGGTGAGCTTAGATATCCATCGTACACTCAGTCTCAAGGATGGAAATTCCCCGGCATTGGAGAATTTCAGGTGAGACTTGGCTCAAGCTGTTACTTAAAGATCAACCACTTTGTGACTCGAGATTCTTAACTTCTTATTCATTTTGATACTTCCGAGTGTATTTGTCTAAGCTTATAAACTGGTCAGACTGGCTTATAAGCATTATTTTTATGCGTTTGGCAAATACTCGAAAGTGCTTATAAGTTGGTCACCCCCAACTTATGTTTTGTCAGATTATAAACACTTTTAGTTTGATCAAAATATTTATTGTTTTATCCTTACAATCCACTGATCAAAATGGGCTCTAAATGTTGCAGTGCTATGACAAGTACATGAGAACAGATTTCAAGGGGGCAGCAACAAAGGCAGGCCACTCAGAGTGGGATCTTCCAGATGATGCAGGAACATATAATAATGTACCCGCCGAAACAGGATTCTTTGGACCAAATGGTACATACCTTACCGAGAAAGGGAAGTTCTTTTTGACCTGGTACTCTAGCAAGCTACTGCTTCACGGAGATCAGATCCTTGATGAAGCAAACAAAGCTTTCCTGGGATGCAAAGTGAAGCTATCAGCTAAAGCAAGTCTTCATCCACCTGGAAATTCTTTAGTCTTGGCATTATTGATCCCATTAGAGTTTTGACAGCACAAGCTAACAGAATTGTCCCTTCTGTCAATTTTGCTCGAGCAGGTAGCTGGAATTCACTGGTGGTACAAAGATGCCAGCCATGCTGC</genome_strand>
        <mrna_strand>TGATGTTTTCATTCCTATACCCAAATGGGTACTAGCTATCGGAGAAAACAACCCTGATATTTTCTATACTAATCGGACTGGTACAAGGAACAAAGAATGCCTCTCACTTGCCGTGGATAACCAACCTCTATTTGAA-GGTCGAACTGCTATCCAG...................................................................................................ATTTACAGCGACTACATGAGGAGCTTTAGAGAGAACATGTCCGACTTCTTGGAAGCTGGAAGCATAGTAGACATAGAGGTAGGACTTGGTCCTGCCGGTGAGCTTAGATATCCATCGTACACTCAGTCTCAAGGATGGAAATTCCCCGGCATTGGAGAATTTCAG...............................................................................................................................................................................................................................................................................................TGCTATGACAAGTACATGAGAACAGATTTCAAGGGGGCAGCAACAAAGGCAGGCCACTCAGAGTGGGATCTTCCAGATGATGCAGGAACATATAATAATGTACCCGCCGAAACAGGATTCTTTGGACCAAATGGTACATACCTTACCGAGAAAGGGAAGTTCTTTTTGACCTGNTACTCTAGCAAGCTACTGCTTCACGGAGATCAGATCCTTGATGAAGCAAACAAAGCTTTCCTGGGATGCAAAGTGAAGCTATCAGCTAAA...............................................................................................................GTAGCTGGAATTCACTGGTGGTACAAAGATGCCAGCCATGCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E736106" ref_strand="+" ref_description="SGN-E736106 [LC04BE08]">
      <seq>gaaaatatcagggttgttttctatactaatcggactggtacaaggaacaaagaatgcctctcacttgccgtggataaccaacctctatttgaaggtcgaactgctatccagcgactacatgaggagctttagagagaacatgtccgacttcttggaagctggaagcatagtagacatagaggtaggacttggtcctgccggtgagcttagatatccatcgtacactcagtctcaaggatggaaattccccggcattggagaatttcagtgctatgacaagtacatgagaacagatttcaagggggcagcaacaaaggcaggccactcagagtgggatcttccagatgatgcaggaacatataataatgtacccgccgaaacaggattctttggaccaaatggtacataccttaccgagaaagggaagttctttttgacctggtactctagcaagctactgcttcacggagatcagatccttgatgaagcaaacaaagctttcctgggatgcaaagtgaagctatcagctaaagtagctggaattcactggtggtacaaagatgccagccatgctgcagagctaacagcgggattttataatttggacaatcgagatggctatagaccaatagcaaggatgttatcgagacactatggtacctttaatttcacttgccttgagatgaggaattcagaacatccagcttatgctaagtctggccctcaagagctagttcaacaggttttgagtgttggctgggaagagaacattgatgtagcaggtgagaatgcgcttgcaagatatgacggctatgcctacaaccaaatccttctcaacgctagaccaaatggtatncacaaaacggtccaccaaaactaaaaatggctgggctgact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="72658" stop="75071"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72946" g_stop="73057" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="111" r_length="111" r_score="0.920"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73058" i_stop="73164" i_length="107">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="73165" g_stop="73321" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="112" r_stop="268" r_length="157" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73322" i_stop="73608" i_length="287">
            <donor d_prob="0.932" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73609" g_stop="73872" g_length="264"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="532" r_length="264" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="73873" i_stop="73983" i_length="111">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.835" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="73984" g_stop="74193" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="533" r_stop="742" r_length="210" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="74194" i_stop="74615" i_length="422">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="74616" g_stop="74771" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="743" r_stop="897" r_length="155" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E736106" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>899</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E736106" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72946" e_stop="73057"/>
          <exon e_start="73165" e_stop="73321"/>
          <exon e_start="73609" e_stop="73872"/>
          <exon e_start="73984" e_stop="74193"/>
          <exon e_start="74616" e_stop="74771"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAACAACCCTGATATTTTCTATACTAATCGGACTGGTACAAGGAACAAAGAATGCCTCTCACTTGCCGTGGATAACCAACCTCTATTTGAAGGGTCGAACTGCTATTCAGCTAACTCTCAGAAGGATCAATCCCAATTTTATGCTCAGATACGGATAGACGTATTGTATTATGAGCTTAGGCTCTAACTAAAATTCCTGATGCATTTAGATTTACAGCGACTACATGAGGAGCTTTAGAGAGAACATGTCCGACTTCTTGGAAGCTGGAAGCATAGTAGACATAGAGGTAGGACTTGGTCCTGCCGGTGAGCTTAGATATCCATCGTACACTCAGTCTCAAGGATGGAAATTCCCCGGCATTGGAGAATTTCAGGTGAGACTTGGCTCAAGCTGTTACTTAAAGATCAACCACTTTGTGACTCGAGATTCTTAACTTCTTATTCATTTTGATACTTCCGAGTGTATTTGTCTAAGCTTATAAACTGGTCAGACTGGCTTATAAGCATTATTTTTATGCGTTTGGCAAATACTCGAAAGTGCTTATAAGTTGGTCACCCCCAACTTATGTTTTGTCAGATTATAAACACTTTTAGTTTGATCAAAATATTTATTGTTTTATCCTTACAATCCACTGATCAAAATGGGCTCTAAATGTTGCAGTGCTATGACAAGTACATGAGAACAGATTTCAAGGGGGCAGCAACAAAGGCAGGCCACTCAGAGTGGGATCTTCCAGATGATGCAGGAACATATAATAATGTACCCGCCGAAACAGGATTCTTTGGACCAAATGGTACATACCTTACCGAGAAAGGGAAGTTCTTTTTGACCTGGTACTCTAGCAAGCTACTGCTTCACGGAGATCAGATCCTTGATGAAGCAAACAAAGCTTTCCTGGGATGCAAAGTGAAGCTATCAGCTAAAGCAAGTCTTCATCCACCTGGAAATTCTTTAGTCTTGGCATTATTGATCCCATTAGAGTTTTGACAGCACAAGCTAACAGAATTGTCCCTTCTGTCAATTTTGCTCGAGCAGGTAGCTGGAATTCACTGGTGGTACAAAGATGCCAGCCATGCTGCAGAGCTAACAGCGGGATTTTATAATTTGGACAATCGAGATGGCTATAGACCAATAGCAAGGATGTTATCGAGACACTATGGTACCTTTAATTTCACTTGCCTTGAGATGAGGAATTCAGAACATCCAGCTTATGCTAAGTCTGGCCCTCAAGAGCTAGTTCAACAGGTTAGAAAAGAGAGTTGCATGTTTTATACCATTTTAGCATCCAGTCTAGATCTTGGACAAACTGTGACTTTAACCTTATACTCCCTCCGTCCCAATTTAAGTGTCCTAGTTTAACTGTGCACTAAGTTTATGAAAGGGGAGACACTGACTCTTTTGGTCTTAAATTAAAGATGCATGTGTGTATCCCTTTGATTTTTGGTCTTAGACCTGCCATGTAGAATGTTGGAACTGGAAAGGTTACTAAATATAGAAAGAGACGCTTTTTTTGGGACAGATCAAAAGGAAAATAAGACAACTTAAACTTGGGACGGAGGGAGTACCAGTTCTGAGAGACCTAATTTTACAGAGGAAAGACTAACATTTTTTCGTGAACAACTAGCTAAGGACTGCTATTCACCAAGACTTTACCTGATTATGTACAGGTTTTGAGTGTTGGCTGGAAAGAGAACATTGATGTAGCAGGTGAGAATGCGCTTGCAAGATATGACGGCTATGCCTACAACCAAATCCTTCTCAACGCTAGACCAAATGGTATCAACAAAAACGGTCCACCAAAACTAAAAATGGCTGGGCTGACT</genome_strand>
        <mrna_strand>GAAAATATCAGGGTTGTTTTCTATACTAATCGGACTGGTACAAGGAACAAAGAATGCCTCTCACTTGCCGTGGATAACCAACCTCTATTTGAA-GGTCGAACTGCTATCCAG...........................................................................................................CGACTACATGAGGAGCTTTAGAGAGAACATGTCCGACTTCTTGGAAGCTGGAAGCATAGTAGACATAGAGGTAGGACTTGGTCCTGCCGGTGAGCTTAGATATCCATCGTACACTCAGTCTCAAGGATGGAAATTCCCCGGCATTGGAGAATTTCAG...............................................................................................................................................................................................................................................................................................TGCTATGACAAGTACATGAGAACAGATTTCAAGGGGGCAGCAACAAAGGCAGGCCACTCAGAGTGGGATCTTCCAGATGATGCAGGAACATATAATAATGTACCCGCCGAAACAGGATTCTTTGGACCAAATGGTACATACCTTACCGAGAAAGGGAAGTTCTTTTTGACCTGGTACTCTAGCAAGCTACTGCTTCACGGAGATCAGATCCTTGATGAAGCAAACAAAGCTTTCCTGGGATGCAAAGTGAAGCTATCAGCTAAA...............................................................................................................GTAGCTGGAATTCACTGGTGGTACAAAGATGCCAGCCATGCTGCAGAGCTAACAGCGGGATTTTATAATTTGGACAATCGAGATGGCTATAGACCAATAGCAAGGATGTTATCGAGACACTATGGTACCTTTAATTTCACTTGCCTTGAGATGAGGAATTCAGAACATCCAGCTTATGCTAAGTCTGGCCCTCAAGAGCTAGTTCAACAG......................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGAGTGTTGGCTGGGAAGAGAACATTGATGTAGCAGGTGAGAATGCGCTTGCAAGATATGACGGCTATGCCTACAACCAAATCCTTCTCAACGCTAGACCAAATGGTATNCAC-AAAACGGTCCACCAAAACTAAAAATGGCTGGGCTGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E256751" ref_strand="+" ref_description="SGN-E256751 [cLEG-40-P6]">
      <seq>tcctgccggtgagcttagatatccatcgtacactcagtctcaaggatggaaattccccggcattggagaatttcagtgctatgacaagtacatgagaacagatttcaagggggcagcaacaaaggcaggccactcagagtgggatcttccagatgatgcaggaacatataataatgtacccgccgaaacaggattctttggaccaaatggtacataccttaccgagaaagggaagttctttttgacctggtactctagcaagctactgcttcacggagatcagatccttgatgaagcaaacaaagctttcctgggatgcaagtgaagctatcagctaaagtagctggaattcactggtggtgcaaagatgccagccatgctgcagagctaacagcgggattttataatttggacaatcgagatggctatagaccaatagcaaggatgttatcgagacactatggtacctttaatctcacttgccttgagatgaggaattcagaacatccagcttatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="72946" stop="74462"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73246" g_stop="73321" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="76" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73322" i_stop="73608" i_length="287">
            <donor d_prob="0.932" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="73609" g_stop="73872" g_length="264"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="339" r_length="263" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73873" i_stop="73983" i_length="111">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.835" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73984" g_stop="74162" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="340" r_stop="518" r_length="179" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E256751" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E256751" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73246" e_stop="73321"/>
          <exon e_start="73609" e_stop="73872"/>
          <exon e_start="73984" e_stop="74162"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTGCCGGTGAGCTTAGATATCCATCGTACACTCAGTCTCAAGGATGGAAATTCCCCGGCATTGGAGAATTTCAGGTGAGACTTGGCTCAAGCTGTTACTTAAAGATCAACCACTTTGTGACTCGAGATTCTTAACTTCTTATTCATTTTGATACTTCCGAGTGTATTTGTCTAAGCTTATAAACTGGTCAGACTGGCTTATAAGCATTATTTTTATGCGTTTGGCAAATACTCGAAAGTGCTTATAAGTTGGTCACCCCCAACTTATGTTTTGTCAGATTATAAACACTTTTAGTTTGATCAAAATATTTATTGTTTTATCCTTACAATCCACTGATCAAAATGGGCTCTAAATGTTGCAGTGCTATGACAAGTACATGAGAACAGATTTCAAGGGGGCAGCAACAAAGGCAGGCCACTCAGAGTGGGATCTTCCAGATGATGCAGGAACATATAATAATGTACCCGCCGAAACAGGATTCTTTGGACCAAATGGTACATACCTTACCGAGAAAGGGAAGTTCTTTTTGACCTGGTACTCTAGCAAGCTACTGCTTCACGGAGATCAGATCCTTGATGAAGCAAACAAAGCTTTCCTGGGATGCAAAGTGAAGCTATCAGCTAAAGCAAGTCTTCATCCACCTGGAAATTCTTTAGTCTTGGCATTATTGATCCCATTAGAGTTTTGACAGCACAAGCTAACAGAATTGTCCCTTCTGTCAATTTTGCTCGAGCAGGTAGCTGGAATTCACTGGTGGTACAAAGATGCCAGCCATGCTGCAGAGCTAACAGCGGGATTTTATAATTTGGACAATCGAGATGGCTATAGACCAATAGCAAGGATGTTATCGAGACACTATGGTACCTTTAATTTCACTTGCCTTGAGATGAGGAATTCAGAACATCCAGCTTATGC</genome_strand>
        <mrna_strand>TCCTGCCGGTGAGCTTAGATATCCATCGTACACTCAGTCTCAAGGATGGAAATTCCCCGGCATTGGAGAATTTCAG...............................................................................................................................................................................................................................................................................................TGCTATGACAAGTACATGAGAACAGATTTCAAGGGGGCAGCAACAAAGGCAGGCCACTCAGAGTGGGATCTTCCAGATGATGCAGGAACATATAATAATGTACCCGCCGAAACAGGATTCTTTGGACCAAATGGTACATACCTTACCGAGAAAGGGAAGTTCTTTTTGACCTGGTACTCTAGCAAGCTACTGCTTCACGGAGATCAGATCCTTGATGAAGCAAACAAAGCTTTCCTGGGATGC-AAGTGAAGCTATCAGCTAAA...............................................................................................................GTAGCTGGAATTCACTGGTGGTGCAAAGATGCCAGCCATGCTGCAGAGCTAACAGCGGGATTTTATAATTTGGACAATCGAGATGGCTATAGACCAATAGCAAGGATGTTATCGAGACACTATGGTACCTTTAATCTCACTTGCCTTGAGATGAGGAATTCAGAACATCCAGCTTATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E273681" ref_strand="+" ref_description="SGN-E273681 [cLEN-6-H20]">
      <seq>aattcattttgcttcactctaatacactaaactagaagcttctctctaaaactcacatgcagtggatcggaaaaagttccactgctgttttcatctccaaagctaaggcgaaaatattagaatttttcatctaaaagctcccaagctaacttcatgcttctctccaagcgatttttttcgaagtagagtactacggatccaaaagatttcatttcaatctaccaaaatcaagttctagtttgcatcttctcatgggtcgcaataagattgtgatgaagaaaattgaggattcaacatcccgtaaacagttctattcaaatcgcaaggatagcattgtgaagaagtcaaatgagctggcggttgtatgtggtacagatgtggggttgttgatgttttctccatctggtcagctgactacctattctagcaaagaaagtattgaggacatcatgatcgaagctatgaacaagtctgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="83814" stop="88644"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84114" g_stop="84345" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="232" r_length="232" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="84346" i_stop="88007" i_length="3662">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.728" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88008" g_stop="88211" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="233" r_stop="436" r_length="204" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88212" i_stop="88304" i_length="93">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="88305" g_stop="88344" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="476" r_length="40" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E273681" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>476</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E273681" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84114" e_stop="84345"/>
          <exon e_start="88008" e_stop="88211"/>
          <exon e_start="88305" e_stop="88344"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTCATTTTGCTTCACTCTAATACACTAAACTAGAAGCTTCTCTCTAAAACTCACATGCAGTGGATCGGAAAAAGTTCCACTGCTGTTTTCATCTCCAAAGCTAAGGCGAAAATATTAGAATTTTTCATCTAAAAGCTCCCAAGCTAACTTCATGCTTCTCTCCAAGCGATTTTTTTCGAAGTAGAGTACTACGGATCCAAAAGATTTCATTTCAATCTACCAAAATCAAGGTTAATCTACCAGATCTTTGCTTAGATAACTTGTTCAATGATTATTGTGGTTTTAAGTTTAGCTCATTTTTTCTTTTTTGAAGAGGATGAGTGTATGTCCTTATTATGTTTCTTCTCTATGGCTTGTTGAAGTTAAATTTTCTACAAGTGATGTTTGTTCTAAAATCGAGGCTAATCTTCAAATTTCAAGCTCTATGAGTTTAATCTGCAAATTTCAAGCTCTGTGTTTAGGTTAATTGGGTAAAACATTTTTTGCAAATCAAATCTCTGCTTAGATAACTTGGTCGATGATCATTGCGGTTTTAAGTTTAGTTCATTTTTTCTTTTTTCATTAGTTATATTTCTTCTCAGGTGCTTTTCATGTTGTTAGCCTTTTTGTTTATGATGGTTGTGTTTGGATCAACTTTGCACACCCACACCCATATATATATATATATATATATATATATATATATATATATATATTTAGCGATTGGTGGGTAAACCTGGCACCAATGCTGGAGAAGATGAGTGTATGTCCTTATTATGTTTCTTCTCTCTAGCTTGTTGAAGTTAAATTTTCTGCAAGTGATGTTTGTTCTAACTTCTAAAATTCCTTCCTTGTACATCCGTCTATGATGGATGCAAATATAGAAACTTGACAACAAATAGACAAGGGAATCGATGCATTACACCTATGTTTACTAGGTTTTGGCATTGAGTTTGTGTGAATAATGAGAAATGATTGGAGCTCTTTGAAATTTTGAGAAGTACCGGGAAGAATCAAACAAGAAAAAAGAAACTTCGTTGGGAAGAAAATATTGAATGTTGTAGTATTAGGGGCAAATTTAATGTGTGGAGTAAGACAAATGCGGGAAAGAGAAAATCAAAGCATAGAAGAATTTTGCTGATGATAACAGAAAGTGATGGGAGCTCTTTGAAGCTTTGGGAAGTATCCAGGGAAATTTAGTTTGTCGAGTAAGAAGAATGCGGAAAAGAGAGAGAAAGAACAAACAAGAAACTTGCCGATGATAAAGGAAAGTAATAGGAGCTCTTTAAGCCTTGGGAAGTATACAGGACAATTTAACACATGGATTAATACAAATATGGATAGGATAGTGAAAGAGTTCCGATATCGTTTTTAATCTCGAAAGAACACACATCATACGTATAAACTTTCCTTGAATTGAGAATGTTTTCAGGTAGATTAGCTGTTAAACTATAACCAAGAAATGGAATTGCCCTGTCGAAGCATTTATTGCCATATGGGAAAGGGTCAATGGAAAGGGAAGACTTGGCGCCAAGCACTAGCTTGACAACATTCCACAAATACTCGAGAAGATGGTGGCATTGATGGCCAACAATGGACCTAGTGCCATGCCACACAATGACAAGTGTGCTACGGTGGGAAGACAAATTTGAGTTATTCCAATGCAAATGATCATTGCTTTTCACAAGGGGCTTACATAACTTTATTTGAACAAAGATCCAAATATTTTTTTGAGGTGCTCACCGCTTAAGGTAGTTGAGTGTGAGTTTTTGAAAGTTGACCTTTTCTGGCTTATATGATTTCACCTTACATTCACTATCCGAAAGTTCAGTAATTCAACTTATGGACTCTATGAACCTCTGTGCTTGTCATTTTCATAAACGGTCAATTAAAAGGGACGTCTTTCAAAATTCCTTCTGGTATATAACCAATTATTTGCTTGCACCAAATGCATGTGTTTATATGTTGCGGAAGGTGAAGCTTCAGATAAGTATACTTGGTCATGTCATTTAGTAGTAGTTATTGAAGTATTCTGTCTTGTTCAATGTTGTTCTCCTTTGTAATCTAGATTATTCTTTGCTTGTACATCCATATCTATGTGATTTTTAGATACTAAAGAACAAATCAGGTATGTATGTAGGTAGGTAGGTAGGTATATTTCTATGTATATATGTATGTAGGTAGGTGGTTAGGTAACCTATATTTGACAAGTATCAATTCGATATTTAAAATCTTAGCAAGAATCTAGAGTAATTATAAATTTGTAATGCGTGGAGTAAAAGGAATGCCAAAAAGAGAGACAATTTGCAATAATAATAATAATAATGTAACACAAAAGGCAATGTTTGCGACAAATATAACTTCCATAGAAGTTGTGGACGTGTTTCAGGTAGATCAAGTGTTTAACTATTGTCAAGCAAGTGGAATTACAATATAGAAACATTTGAAAAGAAGAGGAAAAACATCTTCCTGCTGCCAATTGGCTTGATAACGATGCACAAATGCATGTCTGAGAAAATGCTAGTTTTGACGGTAACCTGCTATATGATATAGTGGGAAGACAAGTTTGTGTTACTTCAATTCTAAAGACAATTGCTTTAAGAAGGGAGTTAGCGTAGAATTATTTGGGCAATGATGATAGAAGTTTGCGTCTTGAGTAGTGAGTTTGTGAAGGTCGAGGTTTGCTGGCTTTTATGACTGTCTTAGTCCACATTAATTAATCTAAAGCTTGCCCGTTTCGCTCATAAGTTCACCATTCAGTATGAGCTGATATTTGATTATATGGTATAATCAGGATCAAAGGGGGCCATGCTAAAGTCTTGAGCTATAATTTGAATAGGTATATGAAGAACTCAATGTGTGAATTGCCTCATCTCGGGGTTTGGTATAGTGGTCGGAGCACATCATGTTATGAATTGAGTGCACGATTCGAGTTTGAATCCTACCACAAAAAAGTCCTGTATTCAAAAGAGAAGGGATCCTAGGAGTCTCTAACTATGTGTCATTGAACCTCGCAGATTTCTCAGTTATTAAAAAAAAAACGAACAGAATATATGGACATCAATTTTTCATTGAAGCTGTGAACATATATTTTATTGTTAGGTCAAGGGTAAAGCTGATAGACGAGAGTGGAGGAAGTCACTCAGCCAAATGATATGACCTGTTTTTTTCTTATACTATTTTATAGGTATAGCATTATTAAGTATCATGTTTCATCATTAGTTGGGCGGATGTACGCCATAAGTTATGGGTTCGGCAGTATCCAGTAGCTTTGTTTCAAACTCTATATATTTGTGTCAAAACATTCACGTAATAATTAAAATCTCATGGTCCCATTTATTGTCATGTATTAGAATTCAGAACCAATAAACTAAACATCTTTATTTCGACTTTGACCTAGATGTCTTAGTTTCTCTGTGGTCTAAGTTTTACTGATGTATTATCATAGTTCTTTTTAATGTGATCTTCTCATAAACCTTACACTCATCTTGAGATATAAAAATATAAATTCGTCTATACATTGAAATTATATCATATTGCCTTTAAATTTCTAGGTAAGGTGATAAATAGTACTTCTCTAATATCATTATTGGAAAGAAAGAGCTTAGGAGTCATTGTTATTTTCCATTCATAATGTTATAGCCCAAATATTTATGTTCATTAACTGTTATTTTCCATTCTGCAGATTACCGCCCACAGAAAAAATCTAGTATTGACTAAAGATTAGCGCTGAAAGTTGTTTTCTTCACAAAATCTTTCTATCTGATTAAATATTAGATTTTCTAAACTGGTTTGACTTAAGACTAACATGTTAACGCATTAAATTCTTTGACCTATTTTTTTCCTTTTATTTTCTTTGTTGATCTATATATTTCTCAGTTCATTGACGAACAACTTTGCATCTAACTTCCAGTTCTAGTTTGCATCTTCTCATGGGTCGCAATAAGATTGTGATGAAGAAAATTGAGGATTCAACATCCCGTAAACAGTTCTATTCAAATCGCAAGGATAGCATTGTGAAGAAGTCAAATGAGCTGGCGGTTGTATGTGGTACAGATGTGGGGTTGTTGATGTTTTCTCCATCTGGTCAGCTGACTACCTATTCTAGCAAAGAAAGGTTAATGAAATTTCTAGAATGATCTTCTTTGATTGAACATTTTACGTTTCCTTTATGATACAAAATGTGATATGATTTCTTTTGATTGCTTAGTATTGAGGACATCATGATCGAAGCTATGAACAAGTCTGTG</genome_strand>
        <mrna_strand>AATTCATTTTGCTTCACTCTAATACACTAAACTAGAAGCTTCTCTCTAAAACTCACATGCAGTGGATCGGAAAAAGTTCCACTGCTGTTTTCATCTCCAAAGCTAAGGCGAAAATATTAGAATTTTTCATCTAAAAGCTCCCAAGCTAACTTCATGCTTCTCTCCAAGCGATTTTTTTCGAAGTAGAGTACTACGGATCCAAAAGATTTCATTTCAATCTACCAAAATCAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGTTTGCATCTTCTCATGGGTCGCAATAAGATTGTGATGAAGAAAATTGAGGATTCAACATCCCGTAAACAGTTCTATTCAAATCGCAAGGATAGCATTGTGAAGAAGTCAAATGAGCTGGCGGTTGTATGTGGTACAGATGTGGGGTTGTTGATGTTTTCTCCATCTGGTCAGCTGACTACCTATTCTAGCAAAGAAAG.............................................................................................TATTGAGGACATCATGATCGAAGCTATGAACAAGTCTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E689255" ref_strand="+" ref_description="SGN-E689255 [t3_tus_80_M03]">
      <seq>cgttaaaactcacatgcagtggatcggaaaaagttccactgctgttttcatctccaaagctaaggcgaaaatattagaatttttcatctaaaagctcccaagctaacttcatgcttctctccaagcgatttttttcgaagtagagtactacggatccaaaagatttcatttcaatctaccaaaatcaagttctagtttgcatcttctcatgggtcgcaataagattgtgatgaagaaaattgaggattcaacatcccgtaaacagttctattcaaatcgcaaggatagcattgtgaagaagtcaaatgagctggcggttgtatgtggtacagatgtggggttgttgatgttttctccatctggtcagctgactacctattctagcaaagaaagtattgaggacatcatgatcgaagctatgaacaagtctgtgaatccgcgacccataccaaatctaaatgaacagcttttgatgcagagtctcaaacagtcaaaatctgaaggccaaatggttggaaaaatagctattgctgaggctcatgagaagaagcttaatgagctcaaagaaacactaagggaggcacaacagaaaataaggtattgcaatccgcaagtggagaatatcagctcagtccaagaagctgaagcatatgagcagttccttaggagtaatatggaacagattcaacaatcaaaagcaaaactcttaggtgtccaaggattagtccatagaaatgaatatcctgcggtcaacacagaggatacggctgctgcaggaaccagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="83860" stop="89825"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84157" g_stop="84345" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="189" r_length="189" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="84346" i_stop="88007" i_length="3662">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.728" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88008" g_stop="88211" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="393" r_length="204" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88212" i_stop="88304" i_length="93">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="88305" g_stop="88352" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="394" r_stop="441" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="88353" i_stop="88462" i_length="110">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="88463" g_stop="88487" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="442" r_stop="466" r_length="25" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="88488" i_stop="88584" i_length="97">
            <donor d_prob="0.996" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="88585" g_stop="88646" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="467" r_stop="528" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="88647" i_stop="88833" i_length="187">
            <donor d_prob="0.698" d_score="1.00"/>
            <acceptor a_prob="0.795" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="88834" g_stop="88840" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="529" r_stop="535" r_length="7" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="88841" i_stop="88967" i_length="127">
            <donor d_prob="0.989" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="88968" g_stop="89029" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="536" r_stop="597" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="89030" i_stop="89120" i_length="91">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="89121" g_stop="89220" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="598" r_stop="697" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="89221" i_stop="89341" i_length="121">
            <donor d_prob="0.942" d_score="1.00"/>
            <acceptor a_prob="0.753" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="89342" g_stop="89392" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="698" r_stop="748" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="89393" i_stop="89488" i_length="96">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="89489" g_stop="89516" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="749" r_stop="776" r_length="28" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E689255" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>776</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E689255" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84157" e_stop="84345"/>
          <exon e_start="88008" e_stop="88211"/>
          <exon e_start="88305" e_stop="88352"/>
          <exon e_start="88463" e_stop="88487"/>
          <exon e_start="88585" e_stop="88646"/>
          <exon e_start="88834" e_stop="88840"/>
          <exon e_start="88968" e_stop="89029"/>
          <exon e_start="89121" e_stop="89220"/>
          <exon e_start="89342" e_stop="89392"/>
          <exon e_start="89489" e_stop="89516"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTAAAACTCACATGCAGTGGATCGGAAAAAGTTCCACTGCTGTTTTCATCTCCAAAGCTAAGGCGAAAATATTAGAATTTTTCATCTAAAAGCTCCCAAGCTAACTTCATGCTTCTCTCCAAGCGATTTTTTTCGAAGTAGAGTACTACGGATCCAAAAGATTTCATTTCAATCTACCAAAATCAAGGTTAATCTACCAGATCTTTGCTTAGATAACTTGTTCAATGATTATTGTGGTTTTAAGTTTAGCTCATTTTTTCTTTTTTGAAGAGGATGAGTGTATGTCCTTATTATGTTTCTTCTCTATGGCTTGTTGAAGTTAAATTTTCTACAAGTGATGTTTGTTCTAAAATCGAGGCTAATCTTCAAATTTCAAGCTCTATGAGTTTAATCTGCAAATTTCAAGCTCTGTGTTTAGGTTAATTGGGTAAAACATTTTTTGCAAATCAAATCTCTGCTTAGATAACTTGGTCGATGATCATTGCGGTTTTAAGTTTAGTTCATTTTTTCTTTTTTCATTAGTTATATTTCTTCTCAGGTGCTTTTCATGTTGTTAGCCTTTTTGTTTATGATGGTTGTGTTTGGATCAACTTTGCACACCCACACCCATATATATATATATATATATATATATATATATATATATATATATTTAGCGATTGGTGGGTAAACCTGGCACCAATGCTGGAGAAGATGAGTGTATGTCCTTATTATGTTTCTTCTCTCTAGCTTGTTGAAGTTAAATTTTCTGCAAGTGATGTTTGTTCTAACTTCTAAAATTCCTTCCTTGTACATCCGTCTATGATGGATGCAAATATAGAAACTTGACAACAAATAGACAAGGGAATCGATGCATTACACCTATGTTTACTAGGTTTTGGCATTGAGTTTGTGTGAATAATGAGAAATGATTGGAGCTCTTTGAAATTTTGAGAAGTACCGGGAAGAATCAAACAAGAAAAAAGAAACTTCGTTGGGAAGAAAATATTGAATGTTGTAGTATTAGGGGCAAATTTAATGTGTGGAGTAAGACAAATGCGGGAAAGAGAAAATCAAAGCATAGAAGAATTTTGCTGATGATAACAGAAAGTGATGGGAGCTCTTTGAAGCTTTGGGAAGTATCCAGGGAAATTTAGTTTGTCGAGTAAGAAGAATGCGGAAAAGAGAGAGAAAGAACAAACAAGAAACTTGCCGATGATAAAGGAAAGTAATAGGAGCTCTTTAAGCCTTGGGAAGTATACAGGACAATTTAACACATGGATTAATACAAATATGGATAGGATAGTGAAAGAGTTCCGATATCGTTTTTAATCTCGAAAGAACACACATCATACGTATAAACTTTCCTTGAATTGAGAATGTTTTCAGGTAGATTAGCTGTTAAACTATAACCAAGAAATGGAATTGCCCTGTCGAAGCATTTATTGCCATATGGGAAAGGGTCAATGGAAAGGGAAGACTTGGCGCCAAGCACTAGCTTGACAACATTCCACAAATACTCGAGAAGATGGTGGCATTGATGGCCAACAATGGACCTAGTGCCATGCCACACAATGACAAGTGTGCTACGGTGGGAAGACAAATTTGAGTTATTCCAATGCAAATGATCATTGCTTTTCACAAGGGGCTTACATAACTTTATTTGAACAAAGATCCAAATATTTTTTTGAGGTGCTCACCGCTTAAGGTAGTTGAGTGTGAGTTTTTGAAAGTTGACCTTTTCTGGCTTATATGATTTCACCTTACATTCACTATCCGAAAGTTCAGTAATTCAACTTATGGACTCTATGAACCTCTGTGCTTGTCATTTTCATAAACGGTCAATTAAAAGGGACGTCTTTCAAAATTCCTTCTGGTATATAACCAATTATTTGCTTGCACCAAATGCATGTGTTTATATGTTGCGGAAGGTGAAGCTTCAGATAAGTATACTTGGTCATGTCATTTAGTAGTAGTTATTGAAGTATTCTGTCTTGTTCAATGTTGTTCTCCTTTGTAATCTAGATTATTCTTTGCTTGTACATCCATATCTATGTGATTTTTAGATACTAAAGAACAAATCAGGTATGTATGTAGGTAGGTAGGTAGGTATATTTCTATGTATATATGTATGTAGGTAGGTGGTTAGGTAACCTATATTTGACAAGTATCAATTCGATATTTAAAATCTTAGCAAGAATCTAGAGTAATTATAAATTTGTAATGCGTGGAGTAAAAGGAATGCCAAAAAGAGAGACAATTTGCAATAATAATAATAATAATGTAACACAAAAGGCAATGTTTGCGACAAATATAACTTCCATAGAAGTTGTGGACGTGTTTCAGGTAGATCAAGTGTTTAACTATTGTCAAGCAAGTGGAATTACAATATAGAAACATTTGAAAAGAAGAGGAAAAACATCTTCCTGCTGCCAATTGGCTTGATAACGATGCACAAATGCATGTCTGAGAAAATGCTAGTTTTGACGGTAACCTGCTATATGATATAGTGGGAAGACAAGTTTGTGTTACTTCAATTCTAAAGACAATTGCTTTAAGAAGGGAGTTAGCGTAGAATTATTTGGGCAATGATGATAGAAGTTTGCGTCTTGAGTAGTGAGTTTGTGAAGGTCGAGGTTTGCTGGCTTTTATGACTGTCTTAGTCCACATTAATTAATCTAAAGCTTGCCCGTTTCGCTCATAAGTTCACCATTCAGTATGAGCTGATATTTGATTATATGGTATAATCAGGATCAAAGGGGGCCATGCTAAAGTCTTGAGCTATAATTTGAATAGGTATATGAAGAACTCAATGTGTGAATTGCCTCATCTCGGGGTTTGGTATAGTGGTCGGAGCACATCATGTTATGAATTGAGTGCACGATTCGAGTTTGAATCCTACCACAAAAAAGTCCTGTATTCAAAAGAGAAGGGATCCTAGGAGTCTCTAACTATGTGTCATTGAACCTCGCAGATTTCTCAGTTATTAAAAAAAAAACGAACAGAATATATGGACATCAATTTTTCATTGAAGCTGTGAACATATATTTTATTGTTAGGTCAAGGGTAAAGCTGATAGACGAGAGTGGAGGAAGTCACTCAGCCAAATGATATGACCTGTTTTTTTCTTATACTATTTTATAGGTATAGCATTATTAAGTATCATGTTTCATCATTAGTTGGGCGGATGTACGCCATAAGTTATGGGTTCGGCAGTATCCAGTAGCTTTGTTTCAAACTCTATATATTTGTGTCAAAACATTCACGTAATAATTAAAATCTCATGGTCCCATTTATTGTCATGTATTAGAATTCAGAACCAATAAACTAAACATCTTTATTTCGACTTTGACCTAGATGTCTTAGTTTCTCTGTGGTCTAAGTTTTACTGATGTATTATCATAGTTCTTTTTAATGTGATCTTCTCATAAACCTTACACTCATCTTGAGATATAAAAATATAAATTCGTCTATACATTGAAATTATATCATATTGCCTTTAAATTTCTAGGTAAGGTGATAAATAGTACTTCTCTAATATCATTATTGGAAAGAAAGAGCTTAGGAGTCATTGTTATTTTCCATTCATAATGTTATAGCCCAAATATTTATGTTCATTAACTGTTATTTTCCATTCTGCAGATTACCGCCCACAGAAAAAATCTAGTATTGACTAAAGATTAGCGCTGAAAGTTGTTTTCTTCACAAAATCTTTCTATCTGATTAAATATTAGATTTTCTAAACTGGTTTGACTTAAGACTAACATGTTAACGCATTAAATTCTTTGACCTATTTTTTTCCTTTTATTTTCTTTGTTGATCTATATATTTCTCAGTTCATTGACGAACAACTTTGCATCTAACTTCCAGTTCTAGTTTGCATCTTCTCATGGGTCGCAATAAGATTGTGATGAAGAAAATTGAGGATTCAACATCCCGTAAACAGTTCTATTCAAATCGCAAGGATAGCATTGTGAAGAAGTCAAATGAGCTGGCGGTTGTATGTGGTACAGATGTGGGGTTGTTGATGTTTTCTCCATCTGGTCAGCTGACTACCTATTCTAGCAAAGAAAGGTTAATGAAATTTCTAGAATGATCTTCTTTGATTGAACATTTTACGTTTCCTTTATGATACAAAATGTGATATGATTTCTTTTGATTGCTTAGTATTGAGGACATCATGATCGAAGCTATGAACAAGTCTGTGAATCCGCGGTATGTTTATAATTTCAATATGCCAAATCCATGAACTAGACTATGCCAATTCCATTTAACTGACTATCTCAAATGCTTTTTTGTCGTCCCAATTGACATGATTGTTGAAGACCCATACCAAATCTAAATGAACAGGTATTAATCAAGTTTTATACATCTTTTACTGATCAACAGCCTCTACCGGCAAGTCCTTGGAGTTCCGTCGGACCTTAACATGAGGTTTATTTTGCAGCTTTTGATGCAGAGTCTCAAACAGTCAAAATCTGAAGGCCAAATGGTTGGAAAAATAGCTATGTATGACACTCTCCTTTGGGACTCTGTTTATGTGTATTAGTCTATTAGTTCGTCCGAGCGGATTCATGACTTCTCTCTTTCTTTACTCTTTTTTTTTTTTTGGTTGGTATTTTCTACATTATTGAATTATTTTTGTCATTTTTTGCTGGGTATATTACGATGCTGATGATTGATCAACGTGCTTTAGTGCTGAGGTAAGATCTGATGCTTCCACGCACATTAGTGTATACATAGGGTGATCTTACACCAGTAGTTATAAGCTTATATTTTTTATTACTGAAACTCGTAAATTGATATATTTTTCATGTATTTCCATATTAGGCTCATGAGAAGAAGCTTAATGAGCTCAAAGAAACACTAAGGGAGGCACAACAGAAAATAAGGTTCTTGTCTTTCTTTTTTTGTCGTGCATCTCTTTTTTGATATTCTATTTCTAAAAAAGGAATAATATTTTTCTTCCTTGGATGGGGGCAGGTATTGCAATCCGCAAGTGGAGAATATCAGCTCAGTCCAAGAAGCTGAAGCATATGAGCAGTTCCTTAGGAGTAATATGGAACAGATTCAACAATCAAAAGTGAGCATATCTCAAGGCTAATGCAATTTTTTACTTCTATTTCAATAATAATAAAAAAATAGTAGCAGTTGGTTAGTTGAATTAGGACCAGCATGATCATGCTTTGTACATTTCTTATCAGGCAAAACTCTTAGGTGTCCAAGGATTAGTCCATAGAAATGAATATCCTGCGGTAAGCCATTTTTTATTGTTTTCATATTTGGAAGGATGTTTAACTGATTTACCGGCATCCAGTATGGAAAGTAACTGTTAGCATTATTATTTATAGGTCAACACAGAGGATACGGCTGCTGCAG</genome_strand>
        <mrna_strand>CGTTAAAACTCACATGCAGTGGATCGGAAAAAGTTCCACTGCTGTTTTCATCTCCAAAGCTAAGGCGAAAATATTAGAATTTTTCATCTAAAAGCTCCCAAGCTAACTTCATGCTTCTCTCCAAGCGATTTTTTTCGAAGTAGAGTACTACGGATCCAAAAGATTTCATTTCAATCTACCAAAATCAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGTTTGCATCTTCTCATGGGTCGCAATAAGATTGTGATGAAGAAAATTGAGGATTCAACATCCCGTAAACAGTTCTATTCAAATCGCAAGGATAGCATTGTGAAGAAGTCAAATGAGCTGGCGGTTGTATGTGGTACAGATGTGGGGTTGTTGATGTTTTCTCCATCTGGTCAGCTGACTACCTATTCTAGCAAAGAAAG.............................................................................................TATTGAGGACATCATGATCGAAGCTATGAACAAGTCTGTGAATCCGCG..............................................................................................................ACCCATACCAAATCTAAATGAACAG.................................................................................................CTTTTGATGCAGAGTCTCAAACAGTCAAAATCTGAAGGCCAAATGGTTGGAAAAATAGCTAT...........................................................................................................................................................................................TGCTGAG...............................................................................................................................GCTCATGAGAAGAAGCTTAATGAGCTCAAAGAAACACTAAGGGAGGCACAACAGAAAATAAG...........................................................................................GTATTGCAATCCGCAAGTGGAGAATATCAGCTCAGTCCAAGAAGCTGAAGCATATGAGCAGTTCCTTAGGAGTAATATGGAACAGATTCAACAATCAAAA.........................................................................................................................GCAAAACTCTTAGGTGTCCAAGGATTAGTCCATAGAAATGAATATCCTGCG................................................................................................GTCAACACAGAGGATACGGCTGCTGCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E699721" ref_strand="+" ref_description="SGN-E699721 [FA11AB03]">
      <seq>ctaaaactcacatgcagtggatcggaaaaagttccactgctgttttcatctccaaagctaaggcgaaaatattagaatttttcatctaaaagctcccaagctaacttcatgcttctctccaagcgatttttttcgaagtagagtactacggatccaaaagatttcatttcaatctaccaaaatcaagttctagtttgcatcttctcatgggtcgcaataagattgtgatgaagaaaattgaggattcaacatcccgtaaacagttctattcaaatcgcaaggatagcattgtgaagaagtcaaatgagctggcggttgtatgtggtacagatgtggggttgttgatgttttctccatctggtcagctgactacctattctagcaaagaaagtattgaggacatcatgatcgaagctatgaacaagtctgtgaatccgcgacccataccaaatctaaatgaacagcttttgatgcagagtctcaaacagtcaaaatctgaaggccaaatggttggaaaaatagctattgctgaggctcatgagaagaagcttaatgagctcaaagaaacactaagggaggcacaacagaaaataaggtattgcaatccgcaagtggagaatatcagctcagtccaagaagctgaagcatatgagcagttccttaggagtaatatggaacagattcaacaatcaaaagcaaaactcttaggtgtccaaggattagtccatagaaatgaatatcctgcggtcaacacagaggatacggctgctgcaggaaccagtagtggatggatgttttgaggaatcaggccggatcgcggtggagaagtagctgcgggtgtccaacagctgcagcagaattataatatgttatattaagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="83859" stop="90591"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84159" g_stop="84345" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="187" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="84346" i_stop="88007" i_length="3662">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.728" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88008" g_stop="88211" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="391" r_length="204" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88212" i_stop="88304" i_length="93">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="88305" g_stop="88352" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="392" r_stop="439" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="88353" i_stop="88462" i_length="110">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="88463" g_stop="88487" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="440" r_stop="464" r_length="25" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="88488" i_stop="88584" i_length="97">
            <donor d_prob="0.996" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="88585" g_stop="88646" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="465" r_stop="526" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="88647" i_stop="88833" i_length="187">
            <donor d_prob="0.698" d_score="1.00"/>
            <acceptor a_prob="0.795" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="88834" g_stop="88840" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="527" r_stop="533" r_length="7" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="88841" i_stop="88967" i_length="127">
            <donor d_prob="0.989" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="88968" g_stop="89029" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="534" r_stop="595" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="89030" i_stop="89120" i_length="91">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="89121" g_stop="89220" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="596" r_stop="695" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="89221" i_stop="89341" i_length="121">
            <donor d_prob="0.942" d_score="1.00"/>
            <acceptor a_prob="0.753" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="89342" g_stop="89392" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="696" r_stop="746" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="89393" i_stop="89488" i_length="96">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="89489" g_stop="89516" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="747" r_stop="774" r_length="28" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="89517" i_stop="90183" i_length="667">
            <donor d_prob="0.989" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="90184" g_stop="90291" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="775" r_stop="881" r_length="107" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E699721" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>882</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E699721" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84159" e_stop="84345"/>
          <exon e_start="88008" e_stop="88211"/>
          <exon e_start="88305" e_stop="88352"/>
          <exon e_start="88463" e_stop="88487"/>
          <exon e_start="88585" e_stop="88646"/>
          <exon e_start="88834" e_stop="88840"/>
          <exon e_start="88968" e_stop="89029"/>
          <exon e_start="89121" e_stop="89220"/>
          <exon e_start="89342" e_stop="89392"/>
          <exon e_start="89489" e_stop="89516"/>
          <exon e_start="90184" e_stop="90291"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAAAACTCACATGCAGTGGATCGGAAAAAGTTCCACTGCTGTTTTCATCTCCAAAGCTAAGGCGAAAATATTAGAATTTTTCATCTAAAAGCTCCCAAGCTAACTTCATGCTTCTCTCCAAGCGATTTTTTTCGAAGTAGAGTACTACGGATCCAAAAGATTTCATTTCAATCTACCAAAATCAAGGTTAATCTACCAGATCTTTGCTTAGATAACTTGTTCAATGATTATTGTGGTTTTAAGTTTAGCTCATTTTTTCTTTTTTGAAGAGGATGAGTGTATGTCCTTATTATGTTTCTTCTCTATGGCTTGTTGAAGTTAAATTTTCTACAAGTGATGTTTGTTCTAAAATCGAGGCTAATCTTCAAATTTCAAGCTCTATGAGTTTAATCTGCAAATTTCAAGCTCTGTGTTTAGGTTAATTGGGTAAAACATTTTTTGCAAATCAAATCTCTGCTTAGATAACTTGGTCGATGATCATTGCGGTTTTAAGTTTAGTTCATTTTTTCTTTTTTCATTAGTTATATTTCTTCTCAGGTGCTTTTCATGTTGTTAGCCTTTTTGTTTATGATGGTTGTGTTTGGATCAACTTTGCACACCCACACCCATATATATATATATATATATATATATATATATATATATATATATTTAGCGATTGGTGGGTAAACCTGGCACCAATGCTGGAGAAGATGAGTGTATGTCCTTATTATGTTTCTTCTCTCTAGCTTGTTGAAGTTAAATTTTCTGCAAGTGATGTTTGTTCTAACTTCTAAAATTCCTTCCTTGTACATCCGTCTATGATGGATGCAAATATAGAAACTTGACAACAAATAGACAAGGGAATCGATGCATTACACCTATGTTTACTAGGTTTTGGCATTGAGTTTGTGTGAATAATGAGAAATGATTGGAGCTCTTTGAAATTTTGAGAAGTACCGGGAAGAATCAAACAAGAAAAAAGAAACTTCGTTGGGAAGAAAATATTGAATGTTGTAGTATTAGGGGCAAATTTAATGTGTGGAGTAAGACAAATGCGGGAAAGAGAAAATCAAAGCATAGAAGAATTTTGCTGATGATAACAGAAAGTGATGGGAGCTCTTTGAAGCTTTGGGAAGTATCCAGGGAAATTTAGTTTGTCGAGTAAGAAGAATGCGGAAAAGAGAGAGAAAGAACAAACAAGAAACTTGCCGATGATAAAGGAAAGTAATAGGAGCTCTTTAAGCCTTGGGAAGTATACAGGACAATTTAACACATGGATTAATACAAATATGGATAGGATAGTGAAAGAGTTCCGATATCGTTTTTAATCTCGAAAGAACACACATCATACGTATAAACTTTCCTTGAATTGAGAATGTTTTCAGGTAGATTAGCTGTTAAACTATAACCAAGAAATGGAATTGCCCTGTCGAAGCATTTATTGCCATATGGGAAAGGGTCAATGGAAAGGGAAGACTTGGCGCCAAGCACTAGCTTGACAACATTCCACAAATACTCGAGAAGATGGTGGCATTGATGGCCAACAATGGACCTAGTGCCATGCCACACAATGACAAGTGTGCTACGGTGGGAAGACAAATTTGAGTTATTCCAATGCAAATGATCATTGCTTTTCACAAGGGGCTTACATAACTTTATTTGAACAAAGATCCAAATATTTTTTTGAGGTGCTCACCGCTTAAGGTAGTTGAGTGTGAGTTTTTGAAAGTTGACCTTTTCTGGCTTATATGATTTCACCTTACATTCACTATCCGAAAGTTCAGTAATTCAACTTATGGACTCTATGAACCTCTGTGCTTGTCATTTTCATAAACGGTCAATTAAAAGGGACGTCTTTCAAAATTCCTTCTGGTATATAACCAATTATTTGCTTGCACCAAATGCATGTGTTTATATGTTGCGGAAGGTGAAGCTTCAGATAAGTATACTTGGTCATGTCATTTAGTAGTAGTTATTGAAGTATTCTGTCTTGTTCAATGTTGTTCTCCTTTGTAATCTAGATTATTCTTTGCTTGTACATCCATATCTATGTGATTTTTAGATACTAAAGAACAAATCAGGTATGTATGTAGGTAGGTAGGTAGGTATATTTCTATGTATATATGTATGTAGGTAGGTGGTTAGGTAACCTATATTTGACAAGTATCAATTCGATATTTAAAATCTTAGCAAGAATCTAGAGTAATTATAAATTTGTAATGCGTGGAGTAAAAGGAATGCCAAAAAGAGAGACAATTTGCAATAATAATAATAATAATGTAACACAAAAGGCAATGTTTGCGACAAATATAACTTCCATAGAAGTTGTGGACGTGTTTCAGGTAGATCAAGTGTTTAACTATTGTCAAGCAAGTGGAATTACAATATAGAAACATTTGAAAAGAAGAGGAAAAACATCTTCCTGCTGCCAATTGGCTTGATAACGATGCACAAATGCATGTCTGAGAAAATGCTAGTTTTGACGGTAACCTGCTATATGATATAGTGGGAAGACAAGTTTGTGTTACTTCAATTCTAAAGACAATTGCTTTAAGAAGGGAGTTAGCGTAGAATTATTTGGGCAATGATGATAGAAGTTTGCGTCTTGAGTAGTGAGTTTGTGAAGGTCGAGGTTTGCTGGCTTTTATGACTGTCTTAGTCCACATTAATTAATCTAAAGCTTGCCCGTTTCGCTCATAAGTTCACCATTCAGTATGAGCTGATATTTGATTATATGGTATAATCAGGATCAAAGGGGGCCATGCTAAAGTCTTGAGCTATAATTTGAATAGGTATATGAAGAACTCAATGTGTGAATTGCCTCATCTCGGGGTTTGGTATAGTGGTCGGAGCACATCATGTTATGAATTGAGTGCACGATTCGAGTTTGAATCCTACCACAAAAAAGTCCTGTATTCAAAAGAGAAGGGATCCTAGGAGTCTCTAACTATGTGTCATTGAACCTCGCAGATTTCTCAGTTATTAAAAAAAAAACGAACAGAATATATGGACATCAATTTTTCATTGAAGCTGTGAACATATATTTTATTGTTAGGTCAAGGGTAAAGCTGATAGACGAGAGTGGAGGAAGTCACTCAGCCAAATGATATGACCTGTTTTTTTCTTATACTATTTTATAGGTATAGCATTATTAAGTATCATGTTTCATCATTAGTTGGGCGGATGTACGCCATAAGTTATGGGTTCGGCAGTATCCAGTAGCTTTGTTTCAAACTCTATATATTTGTGTCAAAACATTCACGTAATAATTAAAATCTCATGGTCCCATTTATTGTCATGTATTAGAATTCAGAACCAATAAACTAAACATCTTTATTTCGACTTTGACCTAGATGTCTTAGTTTCTCTGTGGTCTAAGTTTTACTGATGTATTATCATAGTTCTTTTTAATGTGATCTTCTCATAAACCTTACACTCATCTTGAGATATAAAAATATAAATTCGTCTATACATTGAAATTATATCATATTGCCTTTAAATTTCTAGGTAAGGTGATAAATAGTACTTCTCTAATATCATTATTGGAAAGAAAGAGCTTAGGAGTCATTGTTATTTTCCATTCATAATGTTATAGCCCAAATATTTATGTTCATTAACTGTTATTTTCCATTCTGCAGATTACCGCCCACAGAAAAAATCTAGTATTGACTAAAGATTAGCGCTGAAAGTTGTTTTCTTCACAAAATCTTTCTATCTGATTAAATATTAGATTTTCTAAACTGGTTTGACTTAAGACTAACATGTTAACGCATTAAATTCTTTGACCTATTTTTTTCCTTTTATTTTCTTTGTTGATCTATATATTTCTCAGTTCATTGACGAACAACTTTGCATCTAACTTCCAGTTCTAGTTTGCATCTTCTCATGGGTCGCAATAAGATTGTGATGAAGAAAATTGAGGATTCAACATCCCGTAAACAGTTCTATTCAAATCGCAAGGATAGCATTGTGAAGAAGTCAAATGAGCTGGCGGTTGTATGTGGTACAGATGTGGGGTTGTTGATGTTTTCTCCATCTGGTCAGCTGACTACCTATTCTAGCAAAGAAAGGTTAATGAAATTTCTAGAATGATCTTCTTTGATTGAACATTTTACGTTTCCTTTATGATACAAAATGTGATATGATTTCTTTTGATTGCTTAGTATTGAGGACATCATGATCGAAGCTATGAACAAGTCTGTGAATCCGCGGTATGTTTATAATTTCAATATGCCAAATCCATGAACTAGACTATGCCAATTCCATTTAACTGACTATCTCAAATGCTTTTTTGTCGTCCCAATTGACATGATTGTTGAAGACCCATACCAAATCTAAATGAACAGGTATTAATCAAGTTTTATACATCTTTTACTGATCAACAGCCTCTACCGGCAAGTCCTTGGAGTTCCGTCGGACCTTAACATGAGGTTTATTTTGCAGCTTTTGATGCAGAGTCTCAAACAGTCAAAATCTGAAGGCCAAATGGTTGGAAAAATAGCTATGTATGACACTCTCCTTTGGGACTCTGTTTATGTGTATTAGTCTATTAGTTCGTCCGAGCGGATTCATGACTTCTCTCTTTCTTTACTCTTTTTTTTTTTTTGGTTGGTATTTTCTACATTATTGAATTATTTTTGTCATTTTTTGCTGGGTATATTACGATGCTGATGATTGATCAACGTGCTTTAGTGCTGAGGTAAGATCTGATGCTTCCACGCACATTAGTGTATACATAGGGTGATCTTACACCAGTAGTTATAAGCTTATATTTTTTATTACTGAAACTCGTAAATTGATATATTTTTCATGTATTTCCATATTAGGCTCATGAGAAGAAGCTTAATGAGCTCAAAGAAACACTAAGGGAGGCACAACAGAAAATAAGGTTCTTGTCTTTCTTTTTTTGTCGTGCATCTCTTTTTTGATATTCTATTTCTAAAAAAGGAATAATATTTTTCTTCCTTGGATGGGGGCAGGTATTGCAATCCGCAAGTGGAGAATATCAGCTCAGTCCAAGAAGCTGAAGCATATGAGCAGTTCCTTAGGAGTAATATGGAACAGATTCAACAATCAAAAGTGAGCATATCTCAAGGCTAATGCAATTTTTTACTTCTATTTCAATAATAATAAAAAAATAGTAGCAGTTGGTTAGTTGAATTAGGACCAGCATGATCATGCTTTGTACATTTCTTATCAGGCAAAACTCTTAGGTGTCCAAGGATTAGTCCATAGAAATGAATATCCTGCGGTAAGCCATTTTTTATTGTTTTCATATTTGGAAGGATGTTTAACTGATTTACCGGCATCCAGTATGGAAAGTAACTGTTAGCATTATTATTTATAGGTCAACACAGAGGATACGGCTGCTGCAGGTAAAAAATGTTCATATTTAAATGCTTACTGGTAACTCTTTTGAGTGATCTATATATGTTCTATTTACCTAAAGTTGTCTATCTCTGAATAAGAAGAAAACGACATTACTATATCTTCAGATTGCAAAACATGAAATGATTGAAAGAATGTTCTTCTCTCGCTCCCAAAAGTTAATGAAAGTCCCAAGAGGTCTCCACTCATCATGAGGTTCAATAGTGTTCCGCTCACCCTCCAGCATGACTCAGACCCTCAAAATACCGGTTTAGGAGGTCGTTTGACCATCTAATTTGCAGTGATAAAATTTTAGTACACATATTAGTGGTGTACCGTGTATATAAGTAAAATGAAACATATCTTGGACACCCTTTTAAATAACGAGTTGTGCTATTTCTGGACACCTTTTATAATAATTCACATATCTACACTTAATACTTCAGCAAGTTTTGGTAAACTAGATGTCCAAATGGTATATATATTAGTATATATATACAATAACATCTATACATCAGTCTCAAACAAGTTGATATCGGAATAAGTACTTCATTTAGACTCATTTGATTATACCATCACCGTACTAATAAGTGAACTAAATCTATAGCAACTTTTTATTTTTATTTTCAAACATTTGCGTGTAATCTGCTGAATCTTGCTTGTCTGGATTTGTAGGAACCAGTAGTGGATGGATGTTTTGAGGAATCAGGCCGGATCGCGGTGGAGAAGTAGCTGCGGGTGTCCAACAGCTGCAGCAGAAATATAATTATGTTATATTAAGAA</genome_strand>
        <mrna_strand>CTAAAACTCACATGCAGTGGATCGGAAAAAGTTCCACTGCTGTTTTCATCTCCAAAGCTAAGGCGAAAATATTAGAATTTTTCATCTAAAAGCTCCCAAGCTAACTTCATGCTTCTCTCCAAGCGATTTTTTTCGAAGTAGAGTACTACGGATCCAAAAGATTTCATTTCAATCTACCAAAATCAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGTTTGCATCTTCTCATGGGTCGCAATAAGATTGTGATGAAGAAAATTGAGGATTCAACATCCCGTAAACAGTTCTATTCAAATCGCAAGGATAGCATTGTGAAGAAGTCAAATGAGCTGGCGGTTGTATGTGGTACAGATGTGGGGTTGTTGATGTTTTCTCCATCTGGTCAGCTGACTACCTATTCTAGCAAAGAAAG.............................................................................................TATTGAGGACATCATGATCGAAGCTATGAACAAGTCTGTGAATCCGCG..............................................................................................................ACCCATACCAAATCTAAATGAACAG.................................................................................................CTTTTGATGCAGAGTCTCAAACAGTCAAAATCTGAAGGCCAAATGGTTGGAAAAATAGCTAT...........................................................................................................................................................................................TGCTGAG...............................................................................................................................GCTCATGAGAAGAAGCTTAATGAGCTCAAAGAAACACTAAGGGAGGCACAACAGAAAATAAG...........................................................................................GTATTGCAATCCGCAAGTGGAGAATATCAGCTCAGTCCAAGAAGCTGAAGCATATGAGCAGTTCCTTAGGAGTAATATGGAACAGATTCAACAATCAAAA.........................................................................................................................GCAAAACTCTTAGGTGTCCAAGGATTAGTCCATAGAAATGAATATCCTGCG................................................................................................GTCAACACAGAGGATACGGCTGCTGCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCAGTAGTGGATGGATGTTTTGAGGAATCAGGCCGGATCGCGGTGGAGAAGTAGCTGCGGGTGTCCAACAGCTGCAGCAGAATTATAA-TATGTTATATTAAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E325179" ref_strand="+" ref_description="SGN-E325179 [cTOC-13-F16]">
      <seq>taaaactcacatgcagtggatcggaaaaagttccactgctgttttcatctccaaagctaaggcgaaaatattagaatttttcatctaaaagctcccaagctaacttcatgcttctctccaagcgatttttttcgaagtagagtactacggatccaaaagatttcatttcaatctaccaaaatcaagttctagtttgcatcttctcatgggtcgcaataagattgtgatgaagaaaattgaggattcaacatcccgtaaacagttctattcaaatcgcaaggatagcattgtgaagaagtcaaatgagctggcggttgtatgtggtacagatgtggggttgttgatgttttctccatctggtcagctgactacctattctagcaaagaaagtattgaggacatcatgatcgaagctatgaacaagtctgtgaatccgcgacccataccaaatctaaatgaacagcttttgatgcagagtctcaaacagtcaaaatctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="83860" stop="88918"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84160" g_stop="84345" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="186" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="84346" i_stop="88007" i_length="3662">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.728" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88008" g_stop="88211" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="390" r_length="204" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88212" i_stop="88304" i_length="93">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="88305" g_stop="88352" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="391" r_stop="438" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="88353" i_stop="88462" i_length="110">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="88463" g_stop="88487" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="439" r_stop="463" r_length="25" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="88488" i_stop="88584" i_length="97">
            <donor d_prob="0.996" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="88585" g_stop="88618" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="464" r_stop="497" r_length="34" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E325179" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>497</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E325179" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84160" e_stop="84345"/>
          <exon e_start="88008" e_stop="88211"/>
          <exon e_start="88305" e_stop="88352"/>
          <exon e_start="88463" e_stop="88487"/>
          <exon e_start="88585" e_stop="88618"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAACTCACATGCAGTGGATCGGAAAAAGTTCCACTGCTGTTTTCATCTCCAAAGCTAAGGCGAAAATATTAGAATTTTTCATCTAAAAGCTCCCAAGCTAACTTCATGCTTCTCTCCAAGCGATTTTTTTCGAAGTAGAGTACTACGGATCCAAAAGATTTCATTTCAATCTACCAAAATCAAGGTTAATCTACCAGATCTTTGCTTAGATAACTTGTTCAATGATTATTGTGGTTTTAAGTTTAGCTCATTTTTTCTTTTTTGAAGAGGATGAGTGTATGTCCTTATTATGTTTCTTCTCTATGGCTTGTTGAAGTTAAATTTTCTACAAGTGATGTTTGTTCTAAAATCGAGGCTAATCTTCAAATTTCAAGCTCTATGAGTTTAATCTGCAAATTTCAAGCTCTGTGTTTAGGTTAATTGGGTAAAACATTTTTTGCAAATCAAATCTCTGCTTAGATAACTTGGTCGATGATCATTGCGGTTTTAAGTTTAGTTCATTTTTTCTTTTTTCATTAGTTATATTTCTTCTCAGGTGCTTTTCATGTTGTTAGCCTTTTTGTTTATGATGGTTGTGTTTGGATCAACTTTGCACACCCACACCCATATATATATATATATATATATATATATATATATATATATATATTTAGCGATTGGTGGGTAAACCTGGCACCAATGCTGGAGAAGATGAGTGTATGTCCTTATTATGTTTCTTCTCTCTAGCTTGTTGAAGTTAAATTTTCTGCAAGTGATGTTTGTTCTAACTTCTAAAATTCCTTCCTTGTACATCCGTCTATGATGGATGCAAATATAGAAACTTGACAACAAATAGACAAGGGAATCGATGCATTACACCTATGTTTACTAGGTTTTGGCATTGAGTTTGTGTGAATAATGAGAAATGATTGGAGCTCTTTGAAATTTTGAGAAGTACCGGGAAGAATCAAACAAGAAAAAAGAAACTTCGTTGGGAAGAAAATATTGAATGTTGTAGTATTAGGGGCAAATTTAATGTGTGGAGTAAGACAAATGCGGGAAAGAGAAAATCAAAGCATAGAAGAATTTTGCTGATGATAACAGAAAGTGATGGGAGCTCTTTGAAGCTTTGGGAAGTATCCAGGGAAATTTAGTTTGTCGAGTAAGAAGAATGCGGAAAAGAGAGAGAAAGAACAAACAAGAAACTTGCCGATGATAAAGGAAAGTAATAGGAGCTCTTTAAGCCTTGGGAAGTATACAGGACAATTTAACACATGGATTAATACAAATATGGATAGGATAGTGAAAGAGTTCCGATATCGTTTTTAATCTCGAAAGAACACACATCATACGTATAAACTTTCCTTGAATTGAGAATGTTTTCAGGTAGATTAGCTGTTAAACTATAACCAAGAAATGGAATTGCCCTGTCGAAGCATTTATTGCCATATGGGAAAGGGTCAATGGAAAGGGAAGACTTGGCGCCAAGCACTAGCTTGACAACATTCCACAAATACTCGAGAAGATGGTGGCATTGATGGCCAACAATGGACCTAGTGCCATGCCACACAATGACAAGTGTGCTACGGTGGGAAGACAAATTTGAGTTATTCCAATGCAAATGATCATTGCTTTTCACAAGGGGCTTACATAACTTTATTTGAACAAAGATCCAAATATTTTTTTGAGGTGCTCACCGCTTAAGGTAGTTGAGTGTGAGTTTTTGAAAGTTGACCTTTTCTGGCTTATATGATTTCACCTTACATTCACTATCCGAAAGTTCAGTAATTCAACTTATGGACTCTATGAACCTCTGTGCTTGTCATTTTCATAAACGGTCAATTAAAAGGGACGTCTTTCAAAATTCCTTCTGGTATATAACCAATTATTTGCTTGCACCAAATGCATGTGTTTATATGTTGCGGAAGGTGAAGCTTCAGATAAGTATACTTGGTCATGTCATTTAGTAGTAGTTATTGAAGTATTCTGTCTTGTTCAATGTTGTTCTCCTTTGTAATCTAGATTATTCTTTGCTTGTACATCCATATCTATGTGATTTTTAGATACTAAAGAACAAATCAGGTATGTATGTAGGTAGGTAGGTAGGTATATTTCTATGTATATATGTATGTAGGTAGGTGGTTAGGTAACCTATATTTGACAAGTATCAATTCGATATTTAAAATCTTAGCAAGAATCTAGAGTAATTATAAATTTGTAATGCGTGGAGTAAAAGGAATGCCAAAAAGAGAGACAATTTGCAATAATAATAATAATAATGTAACACAAAAGGCAATGTTTGCGACAAATATAACTTCCATAGAAGTTGTGGACGTGTTTCAGGTAGATCAAGTGTTTAACTATTGTCAAGCAAGTGGAATTACAATATAGAAACATTTGAAAAGAAGAGGAAAAACATCTTCCTGCTGCCAATTGGCTTGATAACGATGCACAAATGCATGTCTGAGAAAATGCTAGTTTTGACGGTAACCTGCTATATGATATAGTGGGAAGACAAGTTTGTGTTACTTCAATTCTAAAGACAATTGCTTTAAGAAGGGAGTTAGCGTAGAATTATTTGGGCAATGATGATAGAAGTTTGCGTCTTGAGTAGTGAGTTTGTGAAGGTCGAGGTTTGCTGGCTTTTATGACTGTCTTAGTCCACATTAATTAATCTAAAGCTTGCCCGTTTCGCTCATAAGTTCACCATTCAGTATGAGCTGATATTTGATTATATGGTATAATCAGGATCAAAGGGGGCCATGCTAAAGTCTTGAGCTATAATTTGAATAGGTATATGAAGAACTCAATGTGTGAATTGCCTCATCTCGGGGTTTGGTATAGTGGTCGGAGCACATCATGTTATGAATTGAGTGCACGATTCGAGTTTGAATCCTACCACAAAAAAGTCCTGTATTCAAAAGAGAAGGGATCCTAGGAGTCTCTAACTATGTGTCATTGAACCTCGCAGATTTCTCAGTTATTAAAAAAAAAACGAACAGAATATATGGACATCAATTTTTCATTGAAGCTGTGAACATATATTTTATTGTTAGGTCAAGGGTAAAGCTGATAGACGAGAGTGGAGGAAGTCACTCAGCCAAATGATATGACCTGTTTTTTTCTTATACTATTTTATAGGTATAGCATTATTAAGTATCATGTTTCATCATTAGTTGGGCGGATGTACGCCATAAGTTATGGGTTCGGCAGTATCCAGTAGCTTTGTTTCAAACTCTATATATTTGTGTCAAAACATTCACGTAATAATTAAAATCTCATGGTCCCATTTATTGTCATGTATTAGAATTCAGAACCAATAAACTAAACATCTTTATTTCGACTTTGACCTAGATGTCTTAGTTTCTCTGTGGTCTAAGTTTTACTGATGTATTATCATAGTTCTTTTTAATGTGATCTTCTCATAAACCTTACACTCATCTTGAGATATAAAAATATAAATTCGTCTATACATTGAAATTATATCATATTGCCTTTAAATTTCTAGGTAAGGTGATAAATAGTACTTCTCTAATATCATTATTGGAAAGAAAGAGCTTAGGAGTCATTGTTATTTTCCATTCATAATGTTATAGCCCAAATATTTATGTTCATTAACTGTTATTTTCCATTCTGCAGATTACCGCCCACAGAAAAAATCTAGTATTGACTAAAGATTAGCGCTGAAAGTTGTTTTCTTCACAAAATCTTTCTATCTGATTAAATATTAGATTTTCTAAACTGGTTTGACTTAAGACTAACATGTTAACGCATTAAATTCTTTGACCTATTTTTTTCCTTTTATTTTCTTTGTTGATCTATATATTTCTCAGTTCATTGACGAACAACTTTGCATCTAACTTCCAGTTCTAGTTTGCATCTTCTCATGGGTCGCAATAAGATTGTGATGAAGAAAATTGAGGATTCAACATCCCGTAAACAGTTCTATTCAAATCGCAAGGATAGCATTGTGAAGAAGTCAAATGAGCTGGCGGTTGTATGTGGTACAGATGTGGGGTTGTTGATGTTTTCTCCATCTGGTCAGCTGACTACCTATTCTAGCAAAGAAAGGTTAATGAAATTTCTAGAATGATCTTCTTTGATTGAACATTTTACGTTTCCTTTATGATACAAAATGTGATATGATTTCTTTTGATTGCTTAGTATTGAGGACATCATGATCGAAGCTATGAACAAGTCTGTGAATCCGCGGTATGTTTATAATTTCAATATGCCAAATCCATGAACTAGACTATGCCAATTCCATTTAACTGACTATCTCAAATGCTTTTTTGTCGTCCCAATTGACATGATTGTTGAAGACCCATACCAAATCTAAATGAACAGGTATTAATCAAGTTTTATACATCTTTTACTGATCAACAGCCTCTACCGGCAAGTCCTTGGAGTTCCGTCGGACCTTAACATGAGGTTTATTTTGCAGCTTTTGATGCAGAGTCTCAAACAGTCAAAATCTG</genome_strand>
        <mrna_strand>TAAAACTCACATGCAGTGGATCGGAAAAAGTTCCACTGCTGTTTTCATCTCCAAAGCTAAGGCGAAAATATTAGAATTTTTCATCTAAAAGCTCCCAAGCTAACTTCATGCTTCTCTCCAAGCGATTTTTTTCGAAGTAGAGTACTACGGATCCAAAAGATTTCATTTCAATCTACCAAAATCAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGTTTGCATCTTCTCATGGGTCGCAATAAGATTGTGATGAAGAAAATTGAGGATTCAACATCCCGTAAACAGTTCTATTCAAATCGCAAGGATAGCATTGTGAAGAAGTCAAATGAGCTGGCGGTTGTATGTGGTACAGATGTGGGGTTGTTGATGTTTTCTCCATCTGGTCAGCTGACTACCTATTCTAGCAAAGAAAG.............................................................................................TATTGAGGACATCATGATCGAAGCTATGAACAAGTCTGTGAATCCGCG..............................................................................................................ACCCATACCAAATCTAAATGAACAG.................................................................................................CTTTTGATGCAGAGTCTCAAACAGTCAAAATCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E325031" ref_strand="+" ref_description="SGN-E325031 [cTOC-13-M23]">
      <seq>aactcacatgcaggggatcggaaaaagttgcactgctgttttcatctccaaagctaaggcgaaaatattagaatttttcatctaaaagctcccaagctaacttcatgcttctctccaagcgatttttttcgaagtagagtactacggatccaaaagatttcatttcaatctaccaaaatcaagttctagtttgcatcttctcatgggtcgcaataagattgtgatgaagaaaattgaggattcaacatcccgtaaacagttctattcaaatcgcaaggatagcattgtgaagaagtcaaatgagctggcggttgtatgtggtacagatgtggggttgttgatgttttctccatctggtcagctgactacctattctagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="83863" stop="88503"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84163" g_stop="84345" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="183" r_length="183" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="84346" i_stop="88007" i_length="3662">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.728" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88008" g_stop="88203" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="379" r_length="196" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E325031" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>379</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E325031" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84163" e_stop="84345"/>
          <exon e_start="88008" e_stop="88203"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTCACATGCAGTGGATCGGAAAAAGTTCCACTGCTGTTTTCATCTCCAAAGCTAAGGCGAAAATATTAGAATTTTTCATCTAAAAGCTCCCAAGCTAACTTCATGCTTCTCTCCAAGCGATTTTTTTCGAAGTAGAGTACTACGGATCCAAAAGATTTCATTTCAATCTACCAAAATCAAGGTTAATCTACCAGATCTTTGCTTAGATAACTTGTTCAATGATTATTGTGGTTTTAAGTTTAGCTCATTTTTTCTTTTTTGAAGAGGATGAGTGTATGTCCTTATTATGTTTCTTCTCTATGGCTTGTTGAAGTTAAATTTTCTACAAGTGATGTTTGTTCTAAAATCGAGGCTAATCTTCAAATTTCAAGCTCTATGAGTTTAATCTGCAAATTTCAAGCTCTGTGTTTAGGTTAATTGGGTAAAACATTTTTTGCAAATCAAATCTCTGCTTAGATAACTTGGTCGATGATCATTGCGGTTTTAAGTTTAGTTCATTTTTTCTTTTTTCATTAGTTATATTTCTTCTCAGGTGCTTTTCATGTTGTTAGCCTTTTTGTTTATGATGGTTGTGTTTGGATCAACTTTGCACACCCACACCCATATATATATATATATATATATATATATATATATATATATATATTTAGCGATTGGTGGGTAAACCTGGCACCAATGCTGGAGAAGATGAGTGTATGTCCTTATTATGTTTCTTCTCTCTAGCTTGTTGAAGTTAAATTTTCTGCAAGTGATGTTTGTTCTAACTTCTAAAATTCCTTCCTTGTACATCCGTCTATGATGGATGCAAATATAGAAACTTGACAACAAATAGACAAGGGAATCGATGCATTACACCTATGTTTACTAGGTTTTGGCATTGAGTTTGTGTGAATAATGAGAAATGATTGGAGCTCTTTGAAATTTTGAGAAGTACCGGGAAGAATCAAACAAGAAAAAAGAAACTTCGTTGGGAAGAAAATATTGAATGTTGTAGTATTAGGGGCAAATTTAATGTGTGGAGTAAGACAAATGCGGGAAAGAGAAAATCAAAGCATAGAAGAATTTTGCTGATGATAACAGAAAGTGATGGGAGCTCTTTGAAGCTTTGGGAAGTATCCAGGGAAATTTAGTTTGTCGAGTAAGAAGAATGCGGAAAAGAGAGAGAAAGAACAAACAAGAAACTTGCCGATGATAAAGGAAAGTAATAGGAGCTCTTTAAGCCTTGGGAAGTATACAGGACAATTTAACACATGGATTAATACAAATATGGATAGGATAGTGAAAGAGTTCCGATATCGTTTTTAATCTCGAAAGAACACACATCATACGTATAAACTTTCCTTGAATTGAGAATGTTTTCAGGTAGATTAGCTGTTAAACTATAACCAAGAAATGGAATTGCCCTGTCGAAGCATTTATTGCCATATGGGAAAGGGTCAATGGAAAGGGAAGACTTGGCGCCAAGCACTAGCTTGACAACATTCCACAAATACTCGAGAAGATGGTGGCATTGATGGCCAACAATGGACCTAGTGCCATGCCACACAATGACAAGTGTGCTACGGTGGGAAGACAAATTTGAGTTATTCCAATGCAAATGATCATTGCTTTTCACAAGGGGCTTACATAACTTTATTTGAACAAAGATCCAAATATTTTTTTGAGGTGCTCACCGCTTAAGGTAGTTGAGTGTGAGTTTTTGAAAGTTGACCTTTTCTGGCTTATATGATTTCACCTTACATTCACTATCCGAAAGTTCAGTAATTCAACTTATGGACTCTATGAACCTCTGTGCTTGTCATTTTCATAAACGGTCAATTAAAAGGGACGTCTTTCAAAATTCCTTCTGGTATATAACCAATTATTTGCTTGCACCAAATGCATGTGTTTATATGTTGCGGAAGGTGAAGCTTCAGATAAGTATACTTGGTCATGTCATTTAGTAGTAGTTATTGAAGTATTCTGTCTTGTTCAATGTTGTTCTCCTTTGTAATCTAGATTATTCTTTGCTTGTACATCCATATCTATGTGATTTTTAGATACTAAAGAACAAATCAGGTATGTATGTAGGTAGGTAGGTAGGTATATTTCTATGTATATATGTATGTAGGTAGGTGGTTAGGTAACCTATATTTGACAAGTATCAATTCGATATTTAAAATCTTAGCAAGAATCTAGAGTAATTATAAATTTGTAATGCGTGGAGTAAAAGGAATGCCAAAAAGAGAGACAATTTGCAATAATAATAATAATAATGTAACACAAAAGGCAATGTTTGCGACAAATATAACTTCCATAGAAGTTGTGGACGTGTTTCAGGTAGATCAAGTGTTTAACTATTGTCAAGCAAGTGGAATTACAATATAGAAACATTTGAAAAGAAGAGGAAAAACATCTTCCTGCTGCCAATTGGCTTGATAACGATGCACAAATGCATGTCTGAGAAAATGCTAGTTTTGACGGTAACCTGCTATATGATATAGTGGGAAGACAAGTTTGTGTTACTTCAATTCTAAAGACAATTGCTTTAAGAAGGGAGTTAGCGTAGAATTATTTGGGCAATGATGATAGAAGTTTGCGTCTTGAGTAGTGAGTTTGTGAAGGTCGAGGTTTGCTGGCTTTTATGACTGTCTTAGTCCACATTAATTAATCTAAAGCTTGCCCGTTTCGCTCATAAGTTCACCATTCAGTATGAGCTGATATTTGATTATATGGTATAATCAGGATCAAAGGGGGCCATGCTAAAGTCTTGAGCTATAATTTGAATAGGTATATGAAGAACTCAATGTGTGAATTGCCTCATCTCGGGGTTTGGTATAGTGGTCGGAGCACATCATGTTATGAATTGAGTGCACGATTCGAGTTTGAATCCTACCACAAAAAAGTCCTGTATTCAAAAGAGAAGGGATCCTAGGAGTCTCTAACTATGTGTCATTGAACCTCGCAGATTTCTCAGTTATTAAAAAAAAAACGAACAGAATATATGGACATCAATTTTTCATTGAAGCTGTGAACATATATTTTATTGTTAGGTCAAGGGTAAAGCTGATAGACGAGAGTGGAGGAAGTCACTCAGCCAAATGATATGACCTGTTTTTTTCTTATACTATTTTATAGGTATAGCATTATTAAGTATCATGTTTCATCATTAGTTGGGCGGATGTACGCCATAAGTTATGGGTTCGGCAGTATCCAGTAGCTTTGTTTCAAACTCTATATATTTGTGTCAAAACATTCACGTAATAATTAAAATCTCATGGTCCCATTTATTGTCATGTATTAGAATTCAGAACCAATAAACTAAACATCTTTATTTCGACTTTGACCTAGATGTCTTAGTTTCTCTGTGGTCTAAGTTTTACTGATGTATTATCATAGTTCTTTTTAATGTGATCTTCTCATAAACCTTACACTCATCTTGAGATATAAAAATATAAATTCGTCTATACATTGAAATTATATCATATTGCCTTTAAATTTCTAGGTAAGGTGATAAATAGTACTTCTCTAATATCATTATTGGAAAGAAAGAGCTTAGGAGTCATTGTTATTTTCCATTCATAATGTTATAGCCCAAATATTTATGTTCATTAACTGTTATTTTCCATTCTGCAGATTACCGCCCACAGAAAAAATCTAGTATTGACTAAAGATTAGCGCTGAAAGTTGTTTTCTTCACAAAATCTTTCTATCTGATTAAATATTAGATTTTCTAAACTGGTTTGACTTAAGACTAACATGTTAACGCATTAAATTCTTTGACCTATTTTTTTCCTTTTATTTTCTTTGTTGATCTATATATTTCTCAGTTCATTGACGAACAACTTTGCATCTAACTTCCAGTTCTAGTTTGCATCTTCTCATGGGTCGCAATAAGATTGTGATGAAGAAAATTGAGGATTCAACATCCCGTAAACAGTTCTATTCAAATCGCAAGGATAGCATTGTGAAGAAGTCAAATGAGCTGGCGGTTGTATGTGGTACAGATGTGGGGTTGTTGATGTTTTCTCCATCTGGTCAGCTGACTACCTATTCTAGC</genome_strand>
        <mrna_strand>AACTCACATGCAGGGGATCGGAAAAAGTTGCACTGCTGTTTTCATCTCCAAAGCTAAGGCGAAAATATTAGAATTTTTCATCTAAAAGCTCCCAAGCTAACTTCATGCTTCTCTCCAAGCGATTTTTTTCGAAGTAGAGTACTACGGATCCAAAAGATTTCATTTCAATCTACCAAAATCAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGTTTGCATCTTCTCATGGGTCGCAATAAGATTGTGATGAAGAAAATTGAGGATTCAACATCCCGTAAACAGTTCTATTCAAATCGCAAGGATAGCATTGTGAAGAAGTCAAATGAGCTGGCGGTTGTATGTGGTACAGATGTGGGGTTGTTGATGTTTTCTCCATCTGGTCAGCTGACTACCTATTCTAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E698758" ref_strand="+" ref_description="SGN-E698758 [FA07CA06]">
      <seq>taaggcgaaaatattagaatttcttctctaaaagctcccaagctaacttcatgcttctctccaagcgatttttttcgaagtagagtactacggatccaaaagatttcatttcaatctaccaaaatcaagttctagtttgcatcttctcatgggtcgcaataagattgtgatgaagaaaattgaggattcaacatcccgtaaacagttctattcaaatcgcaaggatagcattgtgaagaagtcaaatgagctggcggttgtatgtggtacagatgtggggttgttgatgttttctccatctggtcagctgactacctattctagcaaagaaagtattgaggacatcatgatcgaagctatgaacaagtctgtgaatccgcgacccataccaaatctaaatgaacagcttttgatgcagagtctcaaacagtcaaaatctgaaggccaaatggttggaaaaatagctattgctgaggctcatgagaagaagcttaatgagctcaaagaaacactaagggaggcacaacagaaaataaggtattgcaatccgcaagtggagaatatcagctcagtccaagaagctgaagcatatgagcagttccttaggagtaatatggaacagattcaacaatcaaaagcaaaactcttaggtgtccaaggattagtccatagaaatgaatatcctgcggtcaacacagaggatacggctgctgcaggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="83917" stop="89820"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84217" g_stop="84345" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="129" r_length="129" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="84346" i_stop="88007" i_length="3662">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.728" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88008" g_stop="88211" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="333" r_length="204" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88212" i_stop="88304" i_length="93">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="88305" g_stop="88352" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="381" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="88353" i_stop="88462" i_length="110">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="88463" g_stop="88487" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="382" r_stop="406" r_length="25" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="88488" i_stop="88584" i_length="97">
            <donor d_prob="0.996" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="88585" g_stop="88646" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="407" r_stop="468" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="88647" i_stop="88833" i_length="187">
            <donor d_prob="0.698" d_score="1.00"/>
            <acceptor a_prob="0.795" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="88834" g_stop="88840" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="469" r_stop="475" r_length="7" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="88841" i_stop="88967" i_length="127">
            <donor d_prob="0.989" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="88968" g_stop="89029" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="476" r_stop="537" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="89030" i_stop="89120" i_length="91">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="89121" g_stop="89220" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="538" r_stop="637" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="89221" i_stop="89341" i_length="121">
            <donor d_prob="0.942" d_score="1.00"/>
            <acceptor a_prob="0.753" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="89342" g_stop="89392" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="638" r_stop="688" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="89393" i_stop="89488" i_length="96">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="89489" g_stop="89516" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="689" r_stop="716" r_length="28" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E698758" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>716</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E698758" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84217" e_stop="84345"/>
          <exon e_start="88008" e_stop="88211"/>
          <exon e_start="88305" e_stop="88352"/>
          <exon e_start="88463" e_stop="88487"/>
          <exon e_start="88585" e_stop="88646"/>
          <exon e_start="88834" e_stop="88840"/>
          <exon e_start="88968" e_stop="89029"/>
          <exon e_start="89121" e_stop="89220"/>
          <exon e_start="89342" e_stop="89392"/>
          <exon e_start="89489" e_stop="89516"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAGGCGAAAATATTAGAATTTTTCATCTAAAAGCTCCCAAGCTAACTTCATGCTTCTCTCCAAGCGATTTTTTTCGAAGTAGAGTACTACGGATCCAAAAGATTTCATTTCAATCTACCAAAATCAAGGTTAATCTACCAGATCTTTGCTTAGATAACTTGTTCAATGATTATTGTGGTTTTAAGTTTAGCTCATTTTTTCTTTTTTGAAGAGGATGAGTGTATGTCCTTATTATGTTTCTTCTCTATGGCTTGTTGAAGTTAAATTTTCTACAAGTGATGTTTGTTCTAAAATCGAGGCTAATCTTCAAATTTCAAGCTCTATGAGTTTAATCTGCAAATTTCAAGCTCTGTGTTTAGGTTAATTGGGTAAAACATTTTTTGCAAATCAAATCTCTGCTTAGATAACTTGGTCGATGATCATTGCGGTTTTAAGTTTAGTTCATTTTTTCTTTTTTCATTAGTTATATTTCTTCTCAGGTGCTTTTCATGTTGTTAGCCTTTTTGTTTATGATGGTTGTGTTTGGATCAACTTTGCACACCCACACCCATATATATATATATATATATATATATATATATATATATATATATTTAGCGATTGGTGGGTAAACCTGGCACCAATGCTGGAGAAGATGAGTGTATGTCCTTATTATGTTTCTTCTCTCTAGCTTGTTGAAGTTAAATTTTCTGCAAGTGATGTTTGTTCTAACTTCTAAAATTCCTTCCTTGTACATCCGTCTATGATGGATGCAAATATAGAAACTTGACAACAAATAGACAAGGGAATCGATGCATTACACCTATGTTTACTAGGTTTTGGCATTGAGTTTGTGTGAATAATGAGAAATGATTGGAGCTCTTTGAAATTTTGAGAAGTACCGGGAAGAATCAAACAAGAAAAAAGAAACTTCGTTGGGAAGAAAATATTGAATGTTGTAGTATTAGGGGCAAATTTAATGTGTGGAGTAAGACAAATGCGGGAAAGAGAAAATCAAAGCATAGAAGAATTTTGCTGATGATAACAGAAAGTGATGGGAGCTCTTTGAAGCTTTGGGAAGTATCCAGGGAAATTTAGTTTGTCGAGTAAGAAGAATGCGGAAAAGAGAGAGAAAGAACAAACAAGAAACTTGCCGATGATAAAGGAAAGTAATAGGAGCTCTTTAAGCCTTGGGAAGTATACAGGACAATTTAACACATGGATTAATACAAATATGGATAGGATAGTGAAAGAGTTCCGATATCGTTTTTAATCTCGAAAGAACACACATCATACGTATAAACTTTCCTTGAATTGAGAATGTTTTCAGGTAGATTAGCTGTTAAACTATAACCAAGAAATGGAATTGCCCTGTCGAAGCATTTATTGCCATATGGGAAAGGGTCAATGGAAAGGGAAGACTTGGCGCCAAGCACTAGCTTGACAACATTCCACAAATACTCGAGAAGATGGTGGCATTGATGGCCAACAATGGACCTAGTGCCATGCCACACAATGACAAGTGTGCTACGGTGGGAAGACAAATTTGAGTTATTCCAATGCAAATGATCATTGCTTTTCACAAGGGGCTTACATAACTTTATTTGAACAAAGATCCAAATATTTTTTTGAGGTGCTCACCGCTTAAGGTAGTTGAGTGTGAGTTTTTGAAAGTTGACCTTTTCTGGCTTATATGATTTCACCTTACATTCACTATCCGAAAGTTCAGTAATTCAACTTATGGACTCTATGAACCTCTGTGCTTGTCATTTTCATAAACGGTCAATTAAAAGGGACGTCTTTCAAAATTCCTTCTGGTATATAACCAATTATTTGCTTGCACCAAATGCATGTGTTTATATGTTGCGGAAGGTGAAGCTTCAGATAAGTATACTTGGTCATGTCATTTAGTAGTAGTTATTGAAGTATTCTGTCTTGTTCAATGTTGTTCTCCTTTGTAATCTAGATTATTCTTTGCTTGTACATCCATATCTATGTGATTTTTAGATACTAAAGAACAAATCAGGTATGTATGTAGGTAGGTAGGTAGGTATATTTCTATGTATATATGTATGTAGGTAGGTGGTTAGGTAACCTATATTTGACAAGTATCAATTCGATATTTAAAATCTTAGCAAGAATCTAGAGTAATTATAAATTTGTAATGCGTGGAGTAAAAGGAATGCCAAAAAGAGAGACAATTTGCAATAATAATAATAATAATGTAACACAAAAGGCAATGTTTGCGACAAATATAACTTCCATAGAAGTTGTGGACGTGTTTCAGGTAGATCAAGTGTTTAACTATTGTCAAGCAAGTGGAATTACAATATAGAAACATTTGAAAAGAAGAGGAAAAACATCTTCCTGCTGCCAATTGGCTTGATAACGATGCACAAATGCATGTCTGAGAAAATGCTAGTTTTGACGGTAACCTGCTATATGATATAGTGGGAAGACAAGTTTGTGTTACTTCAATTCTAAAGACAATTGCTTTAAGAAGGGAGTTAGCGTAGAATTATTTGGGCAATGATGATAGAAGTTTGCGTCTTGAGTAGTGAGTTTGTGAAGGTCGAGGTTTGCTGGCTTTTATGACTGTCTTAGTCCACATTAATTAATCTAAAGCTTGCCCGTTTCGCTCATAAGTTCACCATTCAGTATGAGCTGATATTTGATTATATGGTATAATCAGGATCAAAGGGGGCCATGCTAAAGTCTTGAGCTATAATTTGAATAGGTATATGAAGAACTCAATGTGTGAATTGCCTCATCTCGGGGTTTGGTATAGTGGTCGGAGCACATCATGTTATGAATTGAGTGCACGATTCGAGTTTGAATCCTACCACAAAAAAGTCCTGTATTCAAAAGAGAAGGGATCCTAGGAGTCTCTAACTATGTGTCATTGAACCTCGCAGATTTCTCAGTTATTAAAAAAAAAACGAACAGAATATATGGACATCAATTTTTCATTGAAGCTGTGAACATATATTTTATTGTTAGGTCAAGGGTAAAGCTGATAGACGAGAGTGGAGGAAGTCACTCAGCCAAATGATATGACCTGTTTTTTTCTTATACTATTTTATAGGTATAGCATTATTAAGTATCATGTTTCATCATTAGTTGGGCGGATGTACGCCATAAGTTATGGGTTCGGCAGTATCCAGTAGCTTTGTTTCAAACTCTATATATTTGTGTCAAAACATTCACGTAATAATTAAAATCTCATGGTCCCATTTATTGTCATGTATTAGAATTCAGAACCAATAAACTAAACATCTTTATTTCGACTTTGACCTAGATGTCTTAGTTTCTCTGTGGTCTAAGTTTTACTGATGTATTATCATAGTTCTTTTTAATGTGATCTTCTCATAAACCTTACACTCATCTTGAGATATAAAAATATAAATTCGTCTATACATTGAAATTATATCATATTGCCTTTAAATTTCTAGGTAAGGTGATAAATAGTACTTCTCTAATATCATTATTGGAAAGAAAGAGCTTAGGAGTCATTGTTATTTTCCATTCATAATGTTATAGCCCAAATATTTATGTTCATTAACTGTTATTTTCCATTCTGCAGATTACCGCCCACAGAAAAAATCTAGTATTGACTAAAGATTAGCGCTGAAAGTTGTTTTCTTCACAAAATCTTTCTATCTGATTAAATATTAGATTTTCTAAACTGGTTTGACTTAAGACTAACATGTTAACGCATTAAATTCTTTGACCTATTTTTTTCCTTTTATTTTCTTTGTTGATCTATATATTTCTCAGTTCATTGACGAACAACTTTGCATCTAACTTCCAGTTCTAGTTTGCATCTTCTCATGGGTCGCAATAAGATTGTGATGAAGAAAATTGAGGATTCAACATCCCGTAAACAGTTCTATTCAAATCGCAAGGATAGCATTGTGAAGAAGTCAAATGAGCTGGCGGTTGTATGTGGTACAGATGTGGGGTTGTTGATGTTTTCTCCATCTGGTCAGCTGACTACCTATTCTAGCAAAGAAAGGTTAATGAAATTTCTAGAATGATCTTCTTTGATTGAACATTTTACGTTTCCTTTATGATACAAAATGTGATATGATTTCTTTTGATTGCTTAGTATTGAGGACATCATGATCGAAGCTATGAACAAGTCTGTGAATCCGCGGTATGTTTATAATTTCAATATGCCAAATCCATGAACTAGACTATGCCAATTCCATTTAACTGACTATCTCAAATGCTTTTTTGTCGTCCCAATTGACATGATTGTTGAAGACCCATACCAAATCTAAATGAACAGGTATTAATCAAGTTTTATACATCTTTTACTGATCAACAGCCTCTACCGGCAAGTCCTTGGAGTTCCGTCGGACCTTAACATGAGGTTTATTTTGCAGCTTTTGATGCAGAGTCTCAAACAGTCAAAATCTGAAGGCCAAATGGTTGGAAAAATAGCTATGTATGACACTCTCCTTTGGGACTCTGTTTATGTGTATTAGTCTATTAGTTCGTCCGAGCGGATTCATGACTTCTCTCTTTCTTTACTCTTTTTTTTTTTTTGGTTGGTATTTTCTACATTATTGAATTATTTTTGTCATTTTTTGCTGGGTATATTACGATGCTGATGATTGATCAACGTGCTTTAGTGCTGAGGTAAGATCTGATGCTTCCACGCACATTAGTGTATACATAGGGTGATCTTACACCAGTAGTTATAAGCTTATATTTTTTATTACTGAAACTCGTAAATTGATATATTTTTCATGTATTTCCATATTAGGCTCATGAGAAGAAGCTTAATGAGCTCAAAGAAACACTAAGGGAGGCACAACAGAAAATAAGGTTCTTGTCTTTCTTTTTTTGTCGTGCATCTCTTTTTTGATATTCTATTTCTAAAAAAGGAATAATATTTTTCTTCCTTGGATGGGGGCAGGTATTGCAATCCGCAAGTGGAGAATATCAGCTCAGTCCAAGAAGCTGAAGCATATGAGCAGTTCCTTAGGAGTAATATGGAACAGATTCAACAATCAAAAGTGAGCATATCTCAAGGCTAATGCAATTTTTTACTTCTATTTCAATAATAATAAAAAAATAGTAGCAGTTGGTTAGTTGAATTAGGACCAGCATGATCATGCTTTGTACATTTCTTATCAGGCAAAACTCTTAGGTGTCCAAGGATTAGTCCATAGAAATGAATATCCTGCGGTAAGCCATTTTTTATTGTTTTCATATTTGGAAGGATGTTTAACTGATTTACCGGCATCCAGTATGGAAAGTAACTGTTAGCATTATTATTTATAGGTCAACACAGAGGATACGGCTGCTGCAG</genome_strand>
        <mrna_strand>TAAGGCGAAAATATTAGAATTTCTTCTCTAAAAGCTCCCAAGCTAACTTCATGCTTCTCTCCAAGCGATTTTTTTCGAAGTAGAGTACTACGGATCCAAAAGATTTCATTTCAATCTACCAAAATCAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGTTTGCATCTTCTCATGGGTCGCAATAAGATTGTGATGAAGAAAATTGAGGATTCAACATCCCGTAAACAGTTCTATTCAAATCGCAAGGATAGCATTGTGAAGAAGTCAAATGAGCTGGCGGTTGTATGTGGTACAGATGTGGGGTTGTTGATGTTTTCTCCATCTGGTCAGCTGACTACCTATTCTAGCAAAGAAAG.............................................................................................TATTGAGGACATCATGATCGAAGCTATGAACAAGTCTGTGAATCCGCG..............................................................................................................ACCCATACCAAATCTAAATGAACAG.................................................................................................CTTTTGATGCAGAGTCTCAAACAGTCAAAATCTGAAGGCCAAATGGTTGGAAAAATAGCTAT...........................................................................................................................................................................................TGCTGAG...............................................................................................................................GCTCATGAGAAGAAGCTTAATGAGCTCAAAGAAACACTAAGGGAGGCACAACAGAAAATAAG...........................................................................................GTATTGCAATCCGCAAGTGGAGAATATCAGCTCAGTCCAAGAAGCTGAAGCATATGAGCAGTTCCTTAGGAGTAATATGGAACAGATTCAACAATCAAAA.........................................................................................................................GCAAAACTCTTAGGTGTCCAAGGATTAGTCCATAGAAATGAATATCCTGCG................................................................................................GTCAACACAGAGGATACGGCTGCTGCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E299451" ref_strand="+" ref_description="SGN-E299451 [cLET-43-L23]">
      <seq>atattacaatttttcatctaaaagctcccaagctaacttcatgcttctctccaagcgatttttttcgaagtagagtactacggatccaaaagatttcatttcaatctaccaaaatcaagttctagtttgcatcttctcatgggtcgcaataagattgtgatgaagaaaattgaggattcaacatcccgtaaacagttctattcaaatcgcaaggatagcattgtgaagaagtcaaatgagctggcggttgtatgtggtacagatgtggggttgttgatgttttctccatctggtcagctgactacctattctagcaaagaaagtattgaggacatcatgatcgaagctatgaacaagtctgtgaatccgcgacccataccaaatctaaatgaacagcttttgatgcagagtctcaaacagtcaaaatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="83927" stop="88917"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84227" g_stop="84345" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="119" r_length="119" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="84346" i_stop="88007" i_length="3662">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.728" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88008" g_stop="88211" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="323" r_length="204" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88212" i_stop="88304" i_length="93">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="88305" g_stop="88352" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="371" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="88353" i_stop="88462" i_length="110">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="88463" g_stop="88487" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="396" r_length="25" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="88488" i_stop="88584" i_length="97">
            <donor d_prob="0.996" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="88585" g_stop="88617" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="397" r_stop="429" r_length="33" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E299451" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>429</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E299451" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84227" e_stop="84345"/>
          <exon e_start="88008" e_stop="88211"/>
          <exon e_start="88305" e_stop="88352"/>
          <exon e_start="88463" e_stop="88487"/>
          <exon e_start="88585" e_stop="88617"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATTAGAATTTTTCATCTAAAAGCTCCCAAGCTAACTTCATGCTTCTCTCCAAGCGATTTTTTTCGAAGTAGAGTACTACGGATCCAAAAGATTTCATTTCAATCTACCAAAATCAAGGTTAATCTACCAGATCTTTGCTTAGATAACTTGTTCAATGATTATTGTGGTTTTAAGTTTAGCTCATTTTTTCTTTTTTGAAGAGGATGAGTGTATGTCCTTATTATGTTTCTTCTCTATGGCTTGTTGAAGTTAAATTTTCTACAAGTGATGTTTGTTCTAAAATCGAGGCTAATCTTCAAATTTCAAGCTCTATGAGTTTAATCTGCAAATTTCAAGCTCTGTGTTTAGGTTAATTGGGTAAAACATTTTTTGCAAATCAAATCTCTGCTTAGATAACTTGGTCGATGATCATTGCGGTTTTAAGTTTAGTTCATTTTTTCTTTTTTCATTAGTTATATTTCTTCTCAGGTGCTTTTCATGTTGTTAGCCTTTTTGTTTATGATGGTTGTGTTTGGATCAACTTTGCACACCCACACCCATATATATATATATATATATATATATATATATATATATATATATTTAGCGATTGGTGGGTAAACCTGGCACCAATGCTGGAGAAGATGAGTGTATGTCCTTATTATGTTTCTTCTCTCTAGCTTGTTGAAGTTAAATTTTCTGCAAGTGATGTTTGTTCTAACTTCTAAAATTCCTTCCTTGTACATCCGTCTATGATGGATGCAAATATAGAAACTTGACAACAAATAGACAAGGGAATCGATGCATTACACCTATGTTTACTAGGTTTTGGCATTGAGTTTGTGTGAATAATGAGAAATGATTGGAGCTCTTTGAAATTTTGAGAAGTACCGGGAAGAATCAAACAAGAAAAAAGAAACTTCGTTGGGAAGAAAATATTGAATGTTGTAGTATTAGGGGCAAATTTAATGTGTGGAGTAAGACAAATGCGGGAAAGAGAAAATCAAAGCATAGAAGAATTTTGCTGATGATAACAGAAAGTGATGGGAGCTCTTTGAAGCTTTGGGAAGTATCCAGGGAAATTTAGTTTGTCGAGTAAGAAGAATGCGGAAAAGAGAGAGAAAGAACAAACAAGAAACTTGCCGATGATAAAGGAAAGTAATAGGAGCTCTTTAAGCCTTGGGAAGTATACAGGACAATTTAACACATGGATTAATACAAATATGGATAGGATAGTGAAAGAGTTCCGATATCGTTTTTAATCTCGAAAGAACACACATCATACGTATAAACTTTCCTTGAATTGAGAATGTTTTCAGGTAGATTAGCTGTTAAACTATAACCAAGAAATGGAATTGCCCTGTCGAAGCATTTATTGCCATATGGGAAAGGGTCAATGGAAAGGGAAGACTTGGCGCCAAGCACTAGCTTGACAACATTCCACAAATACTCGAGAAGATGGTGGCATTGATGGCCAACAATGGACCTAGTGCCATGCCACACAATGACAAGTGTGCTACGGTGGGAAGACAAATTTGAGTTATTCCAATGCAAATGATCATTGCTTTTCACAAGGGGCTTACATAACTTTATTTGAACAAAGATCCAAATATTTTTTTGAGGTGCTCACCGCTTAAGGTAGTTGAGTGTGAGTTTTTGAAAGTTGACCTTTTCTGGCTTATATGATTTCACCTTACATTCACTATCCGAAAGTTCAGTAATTCAACTTATGGACTCTATGAACCTCTGTGCTTGTCATTTTCATAAACGGTCAATTAAAAGGGACGTCTTTCAAAATTCCTTCTGGTATATAACCAATTATTTGCTTGCACCAAATGCATGTGTTTATATGTTGCGGAAGGTGAAGCTTCAGATAAGTATACTTGGTCATGTCATTTAGTAGTAGTTATTGAAGTATTCTGTCTTGTTCAATGTTGTTCTCCTTTGTAATCTAGATTATTCTTTGCTTGTACATCCATATCTATGTGATTTTTAGATACTAAAGAACAAATCAGGTATGTATGTAGGTAGGTAGGTAGGTATATTTCTATGTATATATGTATGTAGGTAGGTGGTTAGGTAACCTATATTTGACAAGTATCAATTCGATATTTAAAATCTTAGCAAGAATCTAGAGTAATTATAAATTTGTAATGCGTGGAGTAAAAGGAATGCCAAAAAGAGAGACAATTTGCAATAATAATAATAATAATGTAACACAAAAGGCAATGTTTGCGACAAATATAACTTCCATAGAAGTTGTGGACGTGTTTCAGGTAGATCAAGTGTTTAACTATTGTCAAGCAAGTGGAATTACAATATAGAAACATTTGAAAAGAAGAGGAAAAACATCTTCCTGCTGCCAATTGGCTTGATAACGATGCACAAATGCATGTCTGAGAAAATGCTAGTTTTGACGGTAACCTGCTATATGATATAGTGGGAAGACAAGTTTGTGTTACTTCAATTCTAAAGACAATTGCTTTAAGAAGGGAGTTAGCGTAGAATTATTTGGGCAATGATGATAGAAGTTTGCGTCTTGAGTAGTGAGTTTGTGAAGGTCGAGGTTTGCTGGCTTTTATGACTGTCTTAGTCCACATTAATTAATCTAAAGCTTGCCCGTTTCGCTCATAAGTTCACCATTCAGTATGAGCTGATATTTGATTATATGGTATAATCAGGATCAAAGGGGGCCATGCTAAAGTCTTGAGCTATAATTTGAATAGGTATATGAAGAACTCAATGTGTGAATTGCCTCATCTCGGGGTTTGGTATAGTGGTCGGAGCACATCATGTTATGAATTGAGTGCACGATTCGAGTTTGAATCCTACCACAAAAAAGTCCTGTATTCAAAAGAGAAGGGATCCTAGGAGTCTCTAACTATGTGTCATTGAACCTCGCAGATTTCTCAGTTATTAAAAAAAAAACGAACAGAATATATGGACATCAATTTTTCATTGAAGCTGTGAACATATATTTTATTGTTAGGTCAAGGGTAAAGCTGATAGACGAGAGTGGAGGAAGTCACTCAGCCAAATGATATGACCTGTTTTTTTCTTATACTATTTTATAGGTATAGCATTATTAAGTATCATGTTTCATCATTAGTTGGGCGGATGTACGCCATAAGTTATGGGTTCGGCAGTATCCAGTAGCTTTGTTTCAAACTCTATATATTTGTGTCAAAACATTCACGTAATAATTAAAATCTCATGGTCCCATTTATTGTCATGTATTAGAATTCAGAACCAATAAACTAAACATCTTTATTTCGACTTTGACCTAGATGTCTTAGTTTCTCTGTGGTCTAAGTTTTACTGATGTATTATCATAGTTCTTTTTAATGTGATCTTCTCATAAACCTTACACTCATCTTGAGATATAAAAATATAAATTCGTCTATACATTGAAATTATATCATATTGCCTTTAAATTTCTAGGTAAGGTGATAAATAGTACTTCTCTAATATCATTATTGGAAAGAAAGAGCTTAGGAGTCATTGTTATTTTCCATTCATAATGTTATAGCCCAAATATTTATGTTCATTAACTGTTATTTTCCATTCTGCAGATTACCGCCCACAGAAAAAATCTAGTATTGACTAAAGATTAGCGCTGAAAGTTGTTTTCTTCACAAAATCTTTCTATCTGATTAAATATTAGATTTTCTAAACTGGTTTGACTTAAGACTAACATGTTAACGCATTAAATTCTTTGACCTATTTTTTTCCTTTTATTTTCTTTGTTGATCTATATATTTCTCAGTTCATTGACGAACAACTTTGCATCTAACTTCCAGTTCTAGTTTGCATCTTCTCATGGGTCGCAATAAGATTGTGATGAAGAAAATTGAGGATTCAACATCCCGTAAACAGTTCTATTCAAATCGCAAGGATAGCATTGTGAAGAAGTCAAATGAGCTGGCGGTTGTATGTGGTACAGATGTGGGGTTGTTGATGTTTTCTCCATCTGGTCAGCTGACTACCTATTCTAGCAAAGAAAGGTTAATGAAATTTCTAGAATGATCTTCTTTGATTGAACATTTTACGTTTCCTTTATGATACAAAATGTGATATGATTTCTTTTGATTGCTTAGTATTGAGGACATCATGATCGAAGCTATGAACAAGTCTGTGAATCCGCGGTATGTTTATAATTTCAATATGCCAAATCCATGAACTAGACTATGCCAATTCCATTTAACTGACTATCTCAAATGCTTTTTTGTCGTCCCAATTGACATGATTGTTGAAGACCCATACCAAATCTAAATGAACAGGTATTAATCAAGTTTTATACATCTTTTACTGATCAACAGCCTCTACCGGCAAGTCCTTGGAGTTCCGTCGGACCTTAACATGAGGTTTATTTTGCAGCTTTTGATGCAGAGTCTCAAACAGTCAAAATCT</genome_strand>
        <mrna_strand>ATATTACAATTTTTCATCTAAAAGCTCCCAAGCTAACTTCATGCTTCTCTCCAAGCGATTTTTTTCGAAGTAGAGTACTACGGATCCAAAAGATTTCATTTCAATCTACCAAAATCAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGTTTGCATCTTCTCATGGGTCGCAATAAGATTGTGATGAAGAAAATTGAGGATTCAACATCCCGTAAACAGTTCTATTCAAATCGCAAGGATAGCATTGTGAAGAAGTCAAATGAGCTGGCGGTTGTATGTGGTACAGATGTGGGGTTGTTGATGTTTTCTCCATCTGGTCAGCTGACTACCTATTCTAGCAAAGAAAG.............................................................................................TATTGAGGACATCATGATCGAAGCTATGAACAAGTCTGTGAATCCGCG..............................................................................................................ACCCATACCAAATCTAAATGAACAG.................................................................................................CTTTTGATGCAGAGTCTCAAACAGTCAAAATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E705189" ref_strand="+" ref_description="SGN-E705189 [FA26BF12]">
      <seq>cgttaacttcatgcttctctccaagcgatttttttcgaagtagagtactacggatccaaaagatttcatttcaatctaccaaaatcaagttctagtttgcatcttctcatgggtcgcaataagattgtgatgaagaaaattgaggattcaacatcccgtaaacagttctattcaaatcgcaaggatagcattgtgaagaagtcaaatgagctggcggttgtatgtggtacagatgtggggttgttgatgttttctccatctggtcagctgactacctattctagcaaagaaagtattgaggacatcatgatcgaagctatgaacaagtctgtgaatccgcgacccataccaaatctaaatgaacagcttttgatgcagagtctcaaacagtcaaaatctgaaggccaaatggttggaaaaatagctattgctgaggctcatgagaagaagcttaatgagctcaaagaaacactaagggaggcacaacagaaaataaggtattgcaatccgcaagtggagaatatcagctcagtccaagaagctgaagcatatgagcagttccttaggagtaatatggaacagattcaacaatcaaaagcaaaactcttaggtgtccaaggattagtccatagaaatgaatatcctgcggtcaacacagaggatacggctgctgcaggaaccagtagtggatggatgttttgaggaatcaggccggatcgcggtggagaagtagctgcgggtgtccaacagctgcagcagaaatataattatgttatattaagaacttagtagaataaataacttgcaccaatcaagcatgcaaaagtatgaataatgttgcatctgactattgtgaatttcacttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="83958" stop="90673"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84257" g_stop="84345" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="89" r_length="89" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="84346" i_stop="88007" i_length="3662">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.728" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88008" g_stop="88211" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="90" r_stop="293" r_length="204" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88212" i_stop="88304" i_length="93">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="88305" g_stop="88352" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="341" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="88353" i_stop="88462" i_length="110">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="88463" g_stop="88487" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="342" r_stop="366" r_length="25" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="88488" i_stop="88584" i_length="97">
            <donor d_prob="0.996" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="88585" g_stop="88646" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="367" r_stop="428" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="88647" i_stop="88833" i_length="187">
            <donor d_prob="0.698" d_score="1.00"/>
            <acceptor a_prob="0.795" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="88834" g_stop="88840" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="429" r_stop="435" r_length="7" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="88841" i_stop="88967" i_length="127">
            <donor d_prob="0.989" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="88968" g_stop="89029" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="436" r_stop="497" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="89030" i_stop="89120" i_length="91">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="89121" g_stop="89220" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="498" r_stop="597" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="89221" i_stop="89341" i_length="121">
            <donor d_prob="0.942" d_score="1.00"/>
            <acceptor a_prob="0.753" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="89342" g_stop="89392" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="598" r_stop="648" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="89393" i_stop="89488" i_length="96">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="89489" g_stop="89516" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="649" r_stop="676" r_length="28" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="89517" i_stop="90183" i_length="667">
            <donor d_prob="0.989" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="90184" g_stop="90373" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="677" r_stop="866" r_length="190" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E705189" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>866</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E705189" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84257" e_stop="84345"/>
          <exon e_start="88008" e_stop="88211"/>
          <exon e_start="88305" e_stop="88352"/>
          <exon e_start="88463" e_stop="88487"/>
          <exon e_start="88585" e_stop="88646"/>
          <exon e_start="88834" e_stop="88840"/>
          <exon e_start="88968" e_stop="89029"/>
          <exon e_start="89121" e_stop="89220"/>
          <exon e_start="89342" e_stop="89392"/>
          <exon e_start="89489" e_stop="89516"/>
          <exon e_start="90184" e_stop="90373"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTAACTTCATGCTTCTCTCCAAGCGATTTTTTTCGAAGTAGAGTACTACGGATCCAAAAGATTTCATTTCAATCTACCAAAATCAAGGTTAATCTACCAGATCTTTGCTTAGATAACTTGTTCAATGATTATTGTGGTTTTAAGTTTAGCTCATTTTTTCTTTTTTGAAGAGGATGAGTGTATGTCCTTATTATGTTTCTTCTCTATGGCTTGTTGAAGTTAAATTTTCTACAAGTGATGTTTGTTCTAAAATCGAGGCTAATCTTCAAATTTCAAGCTCTATGAGTTTAATCTGCAAATTTCAAGCTCTGTGTTTAGGTTAATTGGGTAAAACATTTTTTGCAAATCAAATCTCTGCTTAGATAACTTGGTCGATGATCATTGCGGTTTTAAGTTTAGTTCATTTTTTCTTTTTTCATTAGTTATATTTCTTCTCAGGTGCTTTTCATGTTGTTAGCCTTTTTGTTTATGATGGTTGTGTTTGGATCAACTTTGCACACCCACACCCATATATATATATATATATATATATATATATATATATATATATATTTAGCGATTGGTGGGTAAACCTGGCACCAATGCTGGAGAAGATGAGTGTATGTCCTTATTATGTTTCTTCTCTCTAGCTTGTTGAAGTTAAATTTTCTGCAAGTGATGTTTGTTCTAACTTCTAAAATTCCTTCCTTGTACATCCGTCTATGATGGATGCAAATATAGAAACTTGACAACAAATAGACAAGGGAATCGATGCATTACACCTATGTTTACTAGGTTTTGGCATTGAGTTTGTGTGAATAATGAGAAATGATTGGAGCTCTTTGAAATTTTGAGAAGTACCGGGAAGAATCAAACAAGAAAAAAGAAACTTCGTTGGGAAGAAAATATTGAATGTTGTAGTATTAGGGGCAAATTTAATGTGTGGAGTAAGACAAATGCGGGAAAGAGAAAATCAAAGCATAGAAGAATTTTGCTGATGATAACAGAAAGTGATGGGAGCTCTTTGAAGCTTTGGGAAGTATCCAGGGAAATTTAGTTTGTCGAGTAAGAAGAATGCGGAAAAGAGAGAGAAAGAACAAACAAGAAACTTGCCGATGATAAAGGAAAGTAATAGGAGCTCTTTAAGCCTTGGGAAGTATACAGGACAATTTAACACATGGATTAATACAAATATGGATAGGATAGTGAAAGAGTTCCGATATCGTTTTTAATCTCGAAAGAACACACATCATACGTATAAACTTTCCTTGAATTGAGAATGTTTTCAGGTAGATTAGCTGTTAAACTATAACCAAGAAATGGAATTGCCCTGTCGAAGCATTTATTGCCATATGGGAAAGGGTCAATGGAAAGGGAAGACTTGGCGCCAAGCACTAGCTTGACAACATTCCACAAATACTCGAGAAGATGGTGGCATTGATGGCCAACAATGGACCTAGTGCCATGCCACACAATGACAAGTGTGCTACGGTGGGAAGACAAATTTGAGTTATTCCAATGCAAATGATCATTGCTTTTCACAAGGGGCTTACATAACTTTATTTGAACAAAGATCCAAATATTTTTTTGAGGTGCTCACCGCTTAAGGTAGTTGAGTGTGAGTTTTTGAAAGTTGACCTTTTCTGGCTTATATGATTTCACCTTACATTCACTATCCGAAAGTTCAGTAATTCAACTTATGGACTCTATGAACCTCTGTGCTTGTCATTTTCATAAACGGTCAATTAAAAGGGACGTCTTTCAAAATTCCTTCTGGTATATAACCAATTATTTGCTTGCACCAAATGCATGTGTTTATATGTTGCGGAAGGTGAAGCTTCAGATAAGTATACTTGGTCATGTCATTTAGTAGTAGTTATTGAAGTATTCTGTCTTGTTCAATGTTGTTCTCCTTTGTAATCTAGATTATTCTTTGCTTGTACATCCATATCTATGTGATTTTTAGATACTAAAGAACAAATCAGGTATGTATGTAGGTAGGTAGGTAGGTATATTTCTATGTATATATGTATGTAGGTAGGTGGTTAGGTAACCTATATTTGACAAGTATCAATTCGATATTTAAAATCTTAGCAAGAATCTAGAGTAATTATAAATTTGTAATGCGTGGAGTAAAAGGAATGCCAAAAAGAGAGACAATTTGCAATAATAATAATAATAATGTAACACAAAAGGCAATGTTTGCGACAAATATAACTTCCATAGAAGTTGTGGACGTGTTTCAGGTAGATCAAGTGTTTAACTATTGTCAAGCAAGTGGAATTACAATATAGAAACATTTGAAAAGAAGAGGAAAAACATCTTCCTGCTGCCAATTGGCTTGATAACGATGCACAAATGCATGTCTGAGAAAATGCTAGTTTTGACGGTAACCTGCTATATGATATAGTGGGAAGACAAGTTTGTGTTACTTCAATTCTAAAGACAATTGCTTTAAGAAGGGAGTTAGCGTAGAATTATTTGGGCAATGATGATAGAAGTTTGCGTCTTGAGTAGTGAGTTTGTGAAGGTCGAGGTTTGCTGGCTTTTATGACTGTCTTAGTCCACATTAATTAATCTAAAGCTTGCCCGTTTCGCTCATAAGTTCACCATTCAGTATGAGCTGATATTTGATTATATGGTATAATCAGGATCAAAGGGGGCCATGCTAAAGTCTTGAGCTATAATTTGAATAGGTATATGAAGAACTCAATGTGTGAATTGCCTCATCTCGGGGTTTGGTATAGTGGTCGGAGCACATCATGTTATGAATTGAGTGCACGATTCGAGTTTGAATCCTACCACAAAAAAGTCCTGTATTCAAAAGAGAAGGGATCCTAGGAGTCTCTAACTATGTGTCATTGAACCTCGCAGATTTCTCAGTTATTAAAAAAAAAACGAACAGAATATATGGACATCAATTTTTCATTGAAGCTGTGAACATATATTTTATTGTTAGGTCAAGGGTAAAGCTGATAGACGAGAGTGGAGGAAGTCACTCAGCCAAATGATATGACCTGTTTTTTTCTTATACTATTTTATAGGTATAGCATTATTAAGTATCATGTTTCATCATTAGTTGGGCGGATGTACGCCATAAGTTATGGGTTCGGCAGTATCCAGTAGCTTTGTTTCAAACTCTATATATTTGTGTCAAAACATTCACGTAATAATTAAAATCTCATGGTCCCATTTATTGTCATGTATTAGAATTCAGAACCAATAAACTAAACATCTTTATTTCGACTTTGACCTAGATGTCTTAGTTTCTCTGTGGTCTAAGTTTTACTGATGTATTATCATAGTTCTTTTTAATGTGATCTTCTCATAAACCTTACACTCATCTTGAGATATAAAAATATAAATTCGTCTATACATTGAAATTATATCATATTGCCTTTAAATTTCTAGGTAAGGTGATAAATAGTACTTCTCTAATATCATTATTGGAAAGAAAGAGCTTAGGAGTCATTGTTATTTTCCATTCATAATGTTATAGCCCAAATATTTATGTTCATTAACTGTTATTTTCCATTCTGCAGATTACCGCCCACAGAAAAAATCTAGTATTGACTAAAGATTAGCGCTGAAAGTTGTTTTCTTCACAAAATCTTTCTATCTGATTAAATATTAGATTTTCTAAACTGGTTTGACTTAAGACTAACATGTTAACGCATTAAATTCTTTGACCTATTTTTTTCCTTTTATTTTCTTTGTTGATCTATATATTTCTCAGTTCATTGACGAACAACTTTGCATCTAACTTCCAGTTCTAGTTTGCATCTTCTCATGGGTCGCAATAAGATTGTGATGAAGAAAATTGAGGATTCAACATCCCGTAAACAGTTCTATTCAAATCGCAAGGATAGCATTGTGAAGAAGTCAAATGAGCTGGCGGTTGTATGTGGTACAGATGTGGGGTTGTTGATGTTTTCTCCATCTGGTCAGCTGACTACCTATTCTAGCAAAGAAAGGTTAATGAAATTTCTAGAATGATCTTCTTTGATTGAACATTTTACGTTTCCTTTATGATACAAAATGTGATATGATTTCTTTTGATTGCTTAGTATTGAGGACATCATGATCGAAGCTATGAACAAGTCTGTGAATCCGCGGTATGTTTATAATTTCAATATGCCAAATCCATGAACTAGACTATGCCAATTCCATTTAACTGACTATCTCAAATGCTTTTTTGTCGTCCCAATTGACATGATTGTTGAAGACCCATACCAAATCTAAATGAACAGGTATTAATCAAGTTTTATACATCTTTTACTGATCAACAGCCTCTACCGGCAAGTCCTTGGAGTTCCGTCGGACCTTAACATGAGGTTTATTTTGCAGCTTTTGATGCAGAGTCTCAAACAGTCAAAATCTGAAGGCCAAATGGTTGGAAAAATAGCTATGTATGACACTCTCCTTTGGGACTCTGTTTATGTGTATTAGTCTATTAGTTCGTCCGAGCGGATTCATGACTTCTCTCTTTCTTTACTCTTTTTTTTTTTTTGGTTGGTATTTTCTACATTATTGAATTATTTTTGTCATTTTTTGCTGGGTATATTACGATGCTGATGATTGATCAACGTGCTTTAGTGCTGAGGTAAGATCTGATGCTTCCACGCACATTAGTGTATACATAGGGTGATCTTACACCAGTAGTTATAAGCTTATATTTTTTATTACTGAAACTCGTAAATTGATATATTTTTCATGTATTTCCATATTAGGCTCATGAGAAGAAGCTTAATGAGCTCAAAGAAACACTAAGGGAGGCACAACAGAAAATAAGGTTCTTGTCTTTCTTTTTTTGTCGTGCATCTCTTTTTTGATATTCTATTTCTAAAAAAGGAATAATATTTTTCTTCCTTGGATGGGGGCAGGTATTGCAATCCGCAAGTGGAGAATATCAGCTCAGTCCAAGAAGCTGAAGCATATGAGCAGTTCCTTAGGAGTAATATGGAACAGATTCAACAATCAAAAGTGAGCATATCTCAAGGCTAATGCAATTTTTTACTTCTATTTCAATAATAATAAAAAAATAGTAGCAGTTGGTTAGTTGAATTAGGACCAGCATGATCATGCTTTGTACATTTCTTATCAGGCAAAACTCTTAGGTGTCCAAGGATTAGTCCATAGAAATGAATATCCTGCGGTAAGCCATTTTTTATTGTTTTCATATTTGGAAGGATGTTTAACTGATTTACCGGCATCCAGTATGGAAAGTAACTGTTAGCATTATTATTTATAGGTCAACACAGAGGATACGGCTGCTGCAGGTAAAAAATGTTCATATTTAAATGCTTACTGGTAACTCTTTTGAGTGATCTATATATGTTCTATTTACCTAAAGTTGTCTATCTCTGAATAAGAAGAAAACGACATTACTATATCTTCAGATTGCAAAACATGAAATGATTGAAAGAATGTTCTTCTCTCGCTCCCAAAAGTTAATGAAAGTCCCAAGAGGTCTCCACTCATCATGAGGTTCAATAGTGTTCCGCTCACCCTCCAGCATGACTCAGACCCTCAAAATACCGGTTTAGGAGGTCGTTTGACCATCTAATTTGCAGTGATAAAATTTTAGTACACATATTAGTGGTGTACCGTGTATATAAGTAAAATGAAACATATCTTGGACACCCTTTTAAATAACGAGTTGTGCTATTTCTGGACACCTTTTATAATAATTCACATATCTACACTTAATACTTCAGCAAGTTTTGGTAAACTAGATGTCCAAATGGTATATATATTAGTATATATATACAATAACATCTATACATCAGTCTCAAACAAGTTGATATCGGAATAAGTACTTCATTTAGACTCATTTGATTATACCATCACCGTACTAATAAGTGAACTAAATCTATAGCAACTTTTTATTTTTATTTTCAAACATTTGCGTGTAATCTGCTGAATCTTGCTTGTCTGGATTTGTAGGAACCAGTAGTGGATGGATGTTTTGAGGAATCAGGCCGGATCGCGGTGGAGAAGTAGCTGCGGGTGTCCAACAGCTGCAGCAGAAATATAATTATGTTATATTAAGAACTTAGTAGAATAAATAACTTGCACCAATCAAGCATGCAAAAGTATGAATAATGTTGCATCTGACTATTGTGAATTCAACTTT</genome_strand>
        <mrna_strand>CGTTAACTTCATGCTTCTCTCCAAGCGATTTTTTTCGAAGTAGAGTACTACGGATCCAAAAGATTTCATTTCAATCTACCAAAATCAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGTTTGCATCTTCTCATGGGTCGCAATAAGATTGTGATGAAGAAAATTGAGGATTCAACATCCCGTAAACAGTTCTATTCAAATCGCAAGGATAGCATTGTGAAGAAGTCAAATGAGCTGGCGGTTGTATGTGGTACAGATGTGGGGTTGTTGATGTTTTCTCCATCTGGTCAGCTGACTACCTATTCTAGCAAAGAAAG.............................................................................................TATTGAGGACATCATGATCGAAGCTATGAACAAGTCTGTGAATCCGCG..............................................................................................................ACCCATACCAAATCTAAATGAACAG.................................................................................................CTTTTGATGCAGAGTCTCAAACAGTCAAAATCTGAAGGCCAAATGGTTGGAAAAATAGCTAT...........................................................................................................................................................................................TGCTGAG...............................................................................................................................GCTCATGAGAAGAAGCTTAATGAGCTCAAAGAAACACTAAGGGAGGCACAACAGAAAATAAG...........................................................................................GTATTGCAATCCGCAAGTGGAGAATATCAGCTCAGTCCAAGAAGCTGAAGCATATGAGCAGTTCCTTAGGAGTAATATGGAACAGATTCAACAATCAAAA.........................................................................................................................GCAAAACTCTTAGGTGTCCAAGGATTAGTCCATAGAAATGAATATCCTGCG................................................................................................GTCAACACAGAGGATACGGCTGCTGCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCAGTAGTGGATGGATGTTTTGAGGAATCAGGCCGGATCGCGGTGGAGAAGTAGCTGCGGGTGTCCAACAGCTGCAGCAGAAATATAATTATGTTATATTAAGAACTTAGTAGAATAAATAACTTGCACCAATCAAGCATGCAAAAGTATGAATAATGTTGCATCTGACTATTGTGAATTTCACTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E702917" ref_strand="+" ref_description="SGN-E702917 [FA20AC04]">
      <seq>gccagaggcaaaatttcatgtgaaacctaaatatccatagccctccgatctgaagcctctgatatccttccatgggtctaatgtaatccgaaggcataactcaactagtatgtggatggacagtacattgcctccggtctatttgatgttataattctcctaccattaagttcaattttaagtgtccaagtccacaatatgtagagtgtcctcttccttttatggagttatggtctaatagccaaagaggaaaaagaacatcaagaaggaaaagctctatgtggtattgaggattctcatcaaattaaaatggatactctctcctaatagaaaagttaacgaacaattaatcatgagggaacttcatggcatttgtagcctaacttgaataagtttcttggattggcttgacctaaatagaaggaagctcgagctacattgcaaaagcttttatcagcttgtgatgaagaaaattgaggatccaacatcccgtcaacagttctattcaaagcgcaaggataccatccttaagaagtccaatgagttggctgttttatgtgatgtggatgttggtcttctaatgttttctccagccggcgaagtgactagctattctagcaaagaacgtcttgaggatgtcatgctccttgctatgaacaaggctggtgaactgaacaagctatctcctgaaaatccaaatgaacaggctttgatggactctctcacacaatcaaaacatgaagccgaaatggtggagaagatagcgattgttgaggctcatgaggagaagcttaatggggtcaaagaaagactaagtgaagcacaacagaaaataaggtattacgaaccacaagtggagagtatcaactctgtccaagaagctgatgcata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="91311" stop="105059"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91611" g_stop="91684" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="74" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91685" i_stop="91785" i_length="101">
            <donor d_prob="0.772" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91786" g_stop="91859" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="75" r_stop="148" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91860" i_stop="91979" i_length="120">
            <donor d_prob="0.855" d_score="1.00"/>
            <acceptor a_prob="0.299" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91980" g_stop="92013" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="149" r_stop="182" r_length="34" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="92014" i_stop="92480" i_length="467">
            <donor d_prob="0.962" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="92481" g_stop="92608" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="183" r_stop="310" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="92609" i_stop="92699" i_length="91">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.884" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="92700" g_stop="92846" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="457" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="92847" i_stop="103667" i_length="10821">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="103668" g_stop="103837" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="458" r_stop="627" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="103838" i_stop="103921" i_length="84">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="103922" g_stop="103975" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="628" r_stop="681" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="103976" i_stop="104072" i_length="97">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="104073" g_stop="104097" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="682" r_stop="706" r_length="25" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="104098" i_stop="104173" i_length="76">
            <donor d_prob="0.553" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="104174" g_stop="104235" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="707" r_stop="768" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="104236" i_stop="104430" i_length="195">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.377" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="104431" g_stop="104437" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="769" r_stop="775" r_length="7" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="104438" i_stop="104541" i_length="104">
            <donor d_prob="0.926" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="104542" g_stop="104603" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="776" r_stop="837" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="104604" i_stop="104705" i_length="102">
            <donor d_prob="0.866" d_score="1.00"/>
            <acceptor a_prob="0.855" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="104706" g_stop="104759" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="838" r_stop="891" r_length="54" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E702917" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>891</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E702917" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91611" e_stop="91684"/>
          <exon e_start="91786" e_stop="91859"/>
          <exon e_start="91980" e_stop="92013"/>
          <exon e_start="92481" e_stop="92608"/>
          <exon e_start="92700" e_stop="92846"/>
          <exon e_start="103668" e_stop="103837"/>
          <exon e_start="103922" e_stop="103975"/>
          <exon e_start="104073" e_stop="104097"/>
          <exon e_start="104174" e_stop="104235"/>
          <exon e_start="104431" e_stop="104437"/>
          <exon e_start="104542" e_stop="104603"/>
          <exon e_start="104706" e_stop="104759"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCAGAGGCAAAATTTCATGTGAAACCTAAATATCCATAGCCCTCCGATCTGAAGCCTCTGATATCCTTCCATGGTAGTCTCTCTATCCCTCAGATCATGTTTCCATCGAAGCTCCTCTTGTTGTTGAGTATAAAAAAATTTAAGGTTTTGATTTCTCTGTCCCTGTTTTTTTAGGGTCTAATGTAATCCGAAGGCATAACTCAACTAGTATGTGGATGGACAGTACATTGCCTCCGGTCTATTTGATGGTCCGTTACTCAAACACTCCGATTGTTTCAATCGGGTTGATTTGATTATCATTTTCATTCAGTTTTTGAAGTTTTTATCAAATGTGACATTGAGTTCTGCTTGGTTGAACGTTTTGGCAGTTATAATTCTCCTACCATTAAGTTCAATTTTAAGGTAATCTTCATTGATTTTTATGCTCTGTTTTGTCCCATTGTTTAGATGGAATTTATAATTCTCCCACTGTTAAGTTCACTTCTAGCTAATTTTTGTTGATTTATGGGAAAAAAGCTCAGGTGTCATGTACTCTTAGCTTTGTAAAAAGTGATATTGTATTTTGAGAGTGTCGGGTTCGTTCGGTTTTCATTTGATTCAGTTCTGAAGATTTAAGTGTTCTGTTATGCTCGGTTTGGTTGTAGTTTTAGCAATTTCACTACTATTAAGTTCAGTTTTAAGATGATATTCCTTGATTTTTCTTCTTTGTTTTTATCTATTGCTGGATGGAACTGCATACTTTTCTGCCTATCATGCTCAATTCTAGCTATTTTTCGTTGATTTATGAGCTCATTTTTTGCTATTTTTGGGTGCTATTTCCCATATGATTTTTGTAGAAAATGATACATTTTGCTTTGATATTTTGCGAGTGTCCAAGTCCACAATATGTAGAGTGTCCTCTTCCTTTTATGGAGTTATGGTCTAATAGCCAAAGAGGAAAAAGAACATCAAGAAGGAAAAGCTCTATGTGGTATTGAGGATTCTCATCAAATTAAAAGTAAGTCATAAATTCAAGTTGTAATAGGAAATGTCTAACTATATAGTTATGGTGAGCCTCTGAGCATTGTGTAACTGATACATTGGTGCAGTGGATACTCTCTCCTAATAGAAAAGTTAACGAACAATTAATCATGAGGGAACTTCATGGCATTTGTAGCCTAACTTGAATAAGTTTCTTGGATTGGCTTGACCTAAATAGAAGGAAGCTCGAGCTACATTGCAAAAGCTTTTATCAGGTATGCCCTTGATTTTCATACATGTACTACCTGTGCTTAGATGGAGGTAGATCGTACGTATTTCAAAACCCTGAGAATAAAACTGGATATAGAGTATGTGAAATTTTATTCAGATGAATAAGTATAAAGGATAACCTTCGATATACAAGGTCATATTTTCAAATTGAATGACATGTACAATAGCCCTCTTAAACACTTTTTGAACACATATTAGGTGTTTAGCAAATATCAAAAAAGGAAAGAGACATTCTTTTTTAGACGGACTACAAGGGAATGTAAGACAAACAAATTGAAACGGAAGGAGGAAGTAATTTCTTTCATATTAATGAACCTGTTAGTATTGGGTATCAGGGGACAATATCTTTCCCAGTAATTGTTTTTAAGACATCCCCATAAATTGAATTGATTTTATGACACAATGGAAGCCACTACTTGTAGTTTGTTTAGATTGATAAATACTCCTTGGAAATCTCTGTGAATTGTATGATTTTAGTACTAACGTTCGCTAAAGATTCCAAAACCTTTTGAGATTACAACACCAAAAATCATTAGCCTATCTTGTTGCTTAGCTCATGAATTGGCAGAATTGCAGAAGGACTAAGTATCACTTGTTGTGAAAGATTCCAAATCTCCTATTAATTGTGAATAGAGGATACAGATTAGTAGGCATAGCTTTTGGGTGAAGTAGCTTATGGGCGGAATATATGCTGAATAGAAGGAAAATGATTAAATTTGAGGCTTGAGACACAAAGAGGAAGAGGTTGGGATATGATAGGCTTAGAAAAATTGATTTTTTTTAAAAAAGGCTCCCACACACGAATCCCAATGTAATTTTTAAATCAACTCCCAACCTTTAACCCCACCCGCGATTCTTCTGTTCAAAGGAAGCCTCCCTCCCTCTTTCTTTTCTGAAAATCTCCTTCCACCAAAGCCTCTTCGAGACACCCGCGGCTCAATCCCAAAAAGAGTCATCACCAGAAAGTCCCTCACGCACTCGCATGCGCCACCACTTCTTCTCAGTCTTCGACGTCACGTGAGGCACGCGCCGGCGCGTGAGTCGACAAAACTCAAAATTCCTTCTTTTTTGTCGTTCGATCCAGGCCACAAGGGATTTCACCTCCCACTCCTCTTTCGTTTAAAGCACTTTCGTCTCTTTTCTTCAATTTTAAGGGGAGAGATGGATAGCATAATCTTTTTCAAATTAGGGTAAGTCTTATGACTTAACTGATAACGAGCTAGCCTCTGATTCTAGGTTTAAATGGGTAGAGAGTGTTGCATGGTATGTGAGAAAAATGAATTTGAGTAGAGTAGCTCTACAGTGGCTATGCAGAAGATTCAATGAAGCTTCAGAAATCAAAGGAAAATTCTTCAAAACTTGGAGATGCAGAGATTTAACTACTCTTATTTATTTCTCTTTGAAGTACAATAAATATGGTAGATTTATGTGTGTTATTACTGTTAAAGGAGAGATGACCTCTTCTTCTCAGACTTCGACGTCACACGCGACACGCGCTGGTGTGTGAGTCGACAAAACTCAGAATCCCTTCTTTTTTTGTGGTTCAATCCAGGCCACAAGGGATTTCACCTCCCACTCCGCTTCCGTTTAAAGCACTTTCTTTTCTTTTCTTCAATTTTCAGGGGGGAAATGGACAACATAATCTTTTTCAAATTAGGGAGTAAGTCTTATGACTTAACTAATACCAAGCTAGCCTCAGATTCTAGGTTTGAATGGGTAGAGAGTGTTGGGCGGTATGTGAGAAAAATGAAGTTGAGTAGAGTAGCTCTACATTTCCTATGCAGAAGATTTAATGAAGCTTCAGAATTCAAAGGAAAATACTTCAAAACTTGGAGATGCAGAGATTTAACTATTATTTATTGCTCTTTGAAGTACAATAAATATGGTAGATTTATGTCTGTTATTATTGTTAAGGGAGAGCTGACCACTTCTTCTCAGACTTTGACGTCACGCGCTACACGCGTCGGCGCGTGAGTCGACAAAACTCAGAATTCCTTCTTTTTTGTGGTTCGCTCCACGCCACAAGGGATTTCACCTCCCACTTCACTTTCGTTTAAATTACTTTCGTCTCTTTTCTTCAATTTTCAGGGGAGAGGTGGATAGCATAATCTATTTCAAATTAGGGGGTAAGTCTTATGACTTAACTGATAACGAGCTAGCCTCTGATTCTAGGTTTAAATGAGCGGAGAGTGTTGCATGATATGTGAGAAAAAATGAAGTTGAGTAGAGTAGCTCTACAGTTGCCATGCAGAAGATTTAATGAAGCTTCATAAATCAAAGGAAAATCCTTCAAAACTTGGAGATGCAGAGATTTAACTACTCTTATTTATTGCTCTTTGAAGTACAATAAATATGGTAGATTTATTTATGTTATTACTGTTAAAGGAGAGATGACCTCTTCTTCTCAGACTTCGACGTCACACGCGACACGCGCTGGTGTGTGAGTCGACAAAACTCAGAATCCCTTCTTTTTTTGTGGTTCAATCCAGGCCACAAGGGATTTCACCTCCCACTCCGCTTCCGTTTAAAGCACTTTCTTTTCTTTTCTTCAATTTTCAGGGGGGAAATGGACAACATAATTTTTTTCAAATTAGGGAGTAAGTCTTATGACTTAACTAATACCAAGCTAGCCTCAGATTCTAGGTTTGAATGGGTAGAGAGTGTTGGGCGGTATGTGAGAAAAATGAAGTTGAGTAGAGTAGCTCTACATTTCCTATGCAGAAGATTTAATGAAGCTTCAGAATTCAAAGGAAAATACTTCAAAACTTGGAGATGCAAAGATTTAACTATTATTTATTGCTCTTTGAAGTACAATAAATATGGTAGATTTATGTCTGTTATTATTGTTAAGGGAGAGCTGACCACTTCTTCTCAGACTTCGACGTCACGCGCTACACGCGTCGGCGCGTGAGTCGACAAAACTCAGAATTCCTTCTTTTTTGTGGTTCGCTCCACGCCACAAGGGATTTCACCTCCCACTTCACTTTCGTTTAAATTACTTTCTTTTCTTTTCTTCAATTTTCAGGGGAGAGGTGGATAACAAAATCTATTTCAAATTAGGGGGTAAGTCTTATGACTTAACTGATAACGAGCTAGCTCTGATTCTAGGTTTGAATGAGCGGAGAGTGTTGCGTGATATGTGAGAAAAAATGAAGTTGAGTAGAGTAGCTCTACAGTTGCTATGCAGAAGATTTAATGAAGCTTCATAAATCAAAGGAAAATCCTTCAAAACTTGGAGATGCAAAGATTTAACTACTCTTATTTATTGCTCTTTCAAGTACAATAAATATGGTAGATTTATGTCTGTTATTACTGTAAAAGGAGAGATGACCCCTTCTTCTAAGACTTCGACGTCACGCGCGGACAACTTTCGCGCGTGAGTCGACAAAACTCAGAGTTCCTTTTTTTTTGGTTCGATCCAGACCACAAGGGATTTCACCTCTCATTTCACTTTCGTTTAAAGTACTTTCTTTTCTTTTCTTCAATTTTTAGGGGAGAGATGGATAACAAAATCTTTTTCAAATTATGGGGTAATTCTTAAGACTTAAATGATAACGAGCTAGCTCTGATTCTAGGTTTGAATGGGTGGAGGGTGTTGCACGGTATGTGAGAAAAATGAAGTTGAGTAGAGTAGCTCTACAATGGCTATGCAGAAGATTTAATGAAGCTTCAGAAATTAAAGGAAAATCCTTCAAAACTTGGAGATGCAGAGATTTAACTACTCTTATTTATTGCTCTTTGAAGTACAACAAATATGGTAGATTTATGTCTGTTATTACTGTTAAAGGAGAGATGACCTCTTCTTCTCAGACTTTGACGTCACACGCGACACGCGCTGGTGCGTGAGTTGACAAAACTCAGAATCCCTTCTTTTTTTGTGGTTCAATCCAGGCCACAAGGGATTTCACCTCCCACTCCGCTTTCGTTTAAAGCACTTTCTTTTCTTTTCTTCAATTTTCAGGGGGGAAATGGACAACATAATCTTTTTCAAATTAGGGGGTAAGTCTTATGACTTAACTAATACCAAGCTAGCCTCAAATTCTAGGTCTGAATGGGTGGAGAGTGTTGGGCGGTATGTGAGAAAAATGAAGTTGAGTAGAGTAGCTCTACATTTCTTATGCAGAAGATTTAGTGAAGCTTCAGAATTCAAAGGAAAATACTTCAAAACTTGGAGATGCAGAGATTTAACTATTATTTATTGCTCTTTGAAGTATAATAAATATGGTAGATTTATGTCTGTTATTATTGTTAAGGGAGAGCTGACCACTTATTCTCAAACTTCGACGTCACGCGCCGGTGCGTGAGTCGACAAAACTCAGAATTCCTTCTTTTTTGTGGTTCGCTCCAGGCCACAAGGGATTTCACCTCCCACTTCGCTTTCGTTTAAAGTACTTTCTATTCTTTTCTTCAATTTTCAGGGGAGAGATGGATAACAAAATCTATTTCAAATTGAGGGGTAAGTCTTATGACTTAAATGAAACGAGCTAGCTCTGATTCTAGGTTTGAATGGGCGGAGAGTGTTGCGCGGTATGTGAGAAAAATGAAGTTGAGTAGAGTAGCTCTACAGTGGCTATGCAGGAGATTTAATGAAGCTTCATAATTCAAAGGAAAATCCTTCAAAACTTGGAGATGCAGAGATTTAACTACTCTTATTTATTGCTCTTTGAAGTACAATAAATATGGTAGATTTATGTATGTTATTACTGTTAAAGGAGAGATGACCCCTTCTTCTCAGACTTCGACGTCACGCGCGACACGCTTCCGCGCGTGAGTCGACAAAACTCAGAGTTCCTTTTTTTATTGGTTCGATCCAGGCCACAAGGGATTTCACCTCCCAATTCGCTTTCGTTTGAAGCACTTTCGTCTGTTTTCTTCAATTTTTAGGGGAGAGATGGATAACAAAATCTTTTTCAAATTAGGGGTAAGTCTTATGACTTAACTGATAACGAGCTAGCTCAAATTTTAGGTTTGAATGGGCGGAGAGTGTCGCGCAGTATGTGAGAAAAATGAAGTTGAGTAGAGTAGTTCTACAGTGGCTATGCAGACGATTTAATGAAACTTCAGAAATCAAAGGAAAATCCTTCAAAACTTGGAGATGCAGAGATTTAACTACTCTTATTTATTGCTCTTTGAAGTACAATAAATATGGTAGATTTATGTCTTTTATTACTGTTAAAGGAGAGATGACCCCTTCATCTCAGACTTTGACGTCACGCGCGACACGCTTCCGCGCGTGAGTCGACAAAACTCAGAGTTCCCTTTTTTTTGGTTCGATCCAAGCCACAAGGGATGTAACCTCCCACTTCGCTTTCGTTTAAAGTACTTTCTTTTCTTTTCATCAATTTTTAGGGGAGAGATGGATAACAAAATCTTTTTCAAATTAAGGGGTAAGTCTTATGACTTATCTGATAACGAGCTAGCTCTCATTCTAGGTTTGAATGGGCGGAGAGTGTAGCACGGTATGTGAGAAAAATGAAGTTGAGTAGAGTAGCTCTACAGTGGCTATGTAGAAGATTTAATGAAGCTTCTGAAATCAAAGGAAAATCCTTCAAAACTTTGAGATGCAGAGATTTAACTACTCTTGTTTATTGCTCTTTGAAGTACAATAAATAGGCAGATTTATGTCTGTTATTACTGTTAAGAGAGAGCTGACCACTTCTTCAAGACTTCGATGTCACGCGCGACACGCGCCGACGCGTGAGTTGATAAAACTCAGAATTCCTTCTTTTTTGGGGTTCGATCCAGGCCACAAGGGATTTCACCTCCCACTCCGCTTTCGTTTAAAGCACTTTCTTTTCTTTTCTTCAATTTTCAGGGGAGAGATGTATAACAAAATCTTTTTCAAATTAGGGGGTAAGTCTTATGACTTAACTAATACCAAGCTAGCCTCAGATTCTAGGTTTGAATGGGTGGAGAGTGTTGGGCGGTATGTGAGAAAAATGAAGTTGAGTAGAGTAGCTCTACATTTCCTATGCATAAGATTTAATGAAGCTTCATAAATCGAAGGAAAATCCTTCAAAACTTGGAGATGCAAATTAGTGAATAATCACCAAATGTCCTTTATTCAAGGAAGACAAATTATGGATGTCGTGTCAATAGCAAGTGAGTGTGTAGATTCAAGGATTAAAGGAGAGATCCCAATAATTATGAGCAAGCTTGATATAGAAAAGGCATATGATCATGTCAATTGGGAGTTTCTACTTAATATCTTGAGGCAGATGGGATTTGGAGACAAATGACTTAAATGGATAGGTTTTTGCATCAAAACTGTCAGGTTCTTCATACTTGTTAATGGAGAACCTTATGAAGAGTCTGTTGGTCTTTTTCCCTCTGAGAGAGTAGAGAGGATTACAACAGGGACATCCTCTCTCTTCTTTCTTATTTATTTTAGCTATGGAGGGTCTTAACAGTATGATTAGAGTGGCCAATCAAAAGGACTAGATAAAGGGTTTCAACATTGGTAATCAATTAGGGGTCATTTTGCAAATAAGTCACCTTTATATGCAAATGACACACTAATATTTTGTGATGCAAAGGCAGAACAAGTTAGTTACATTAGAGTTGTTTTGGTGATTTCTGAGGCCATCTCTGGATTGGCTGTGAACTGGGGGAGAAGCAGCATCTTCCAAGTCAAGGAAGTGACAAATATTCAGATGTTGGCAAAAATTTTGCAATGCAAGATAGAGCACTTACCAATTACTTACCTGGGAATGCCTTTGGGGAATAATCACAAGGTTTTGTTTATTTGGGATGGAATCATTGAGAAGACAGTGAAGAGGTTGGCTAATTTGAAGGCAAACTATCTGTCTCTGGGAGGAAGAGTCCCTCTGATCAATTCGGTCCTAGATGCGTTGCCTACATATATTATGTCACTTTTCCCTTTACCAACAAAAGGTAGAAGAGAGATTGGATAAGTTGAAGTGTAATTTCCTATGGTCGGGGAACAAAGAAGGCAAAAAATACACTTAGTTAAATGACAGACAACCTTACTGAGCAAGAAGACTGGGGGTCTTCCCATAATAAAATGAAGAGTCTTGAATAAAAGTCTACTTTCTAAATGGCTTTGGAGATTCGTGGTTGAAAATCAGGCATTATGGAGAAGAGCAATTCTCAACAAGTATGGGTAGACCAAGGAGTGGGTGTCTAATGTAGTAGATAGCACGTATGGGGTATCAATTTAGATATCAATCAGAAATTTATGGGATAGTCTAAACTCTAAAGAAGAATTTAGTGGTCAAGGTAGGAGAGGGTAGCAAAATATTTTTTTTGGAAGGACAAGTTAATTGGACAAGAGTGTCTAAACTTAGTCTTCCCCGATCTCTTTTCGTTTTGTACCAACCTTGAGGCTAAAATTGCTGAGATTTGGTCTCCTCAGGAAAAGAACCTCACATTTAGGAGAAATCTAAATGATTGGGAAGTGGATAGAATTGCTGAACTGCTACTCAAATTAGGTGAATTCATGGGCCTTACTACAGAAGCAGATGGTATAAGATGAAAACATGACTCTGATGGCAAATTCTCTTTGCGTCGAGTATATAGGAGAGAGGTCATGACTCACTTCGGGGAATTCATGGTCCATGGAAACAAATATGGAAAGGCAACACCCCAACCAAGGTGAAATGCTTCACCTGGTTGGTCACTAAAAGGGCATGTCTCACTCAGGAAAAACTCAAGAAAAGAGGCTTTCAGATTGTCTCCAGAAGTGTTTTTTGGTCATGAGAAGGAAGAAACTAACAACCACTTATTCCTACACTGTAAGGTTATTGTTTAGGTGTGGCGCATGGTCTACAACATTTCTCAAAAGCCCTAGGTGATGCCAGAATATACTGCTGATCTTTTGAGCTGCTGGATAAGGAGGGGGGAGAGAGACCCAAAAAAGATGGTGGGCTATTTGGAGAGAAAGAAACCTTAGGTTCCATGAGAATATTACTAACAATATGCAGAAAGTTAAAGAAAATTGCATCAACATGTTTTTTTGGTGTAAATAAGAGGTATAGAAGTAGTAGATCAGTTGATAGATTTCCTAGGATCAATGTAATTATAGTTTTAGCTTGCAACTTTTTGGAGGTAGCCAGCATACCCTTAATGCTGAAGAGTACAACTTTAACTTTGTCAAAAAAAAAAACAAGAGGAAGAGGTTGGGGTTGAGCGTAATGGGCTTCAAAGCAACTACTTTAGGTGATATTAATGATGTTAAATGGTTGATGTGGTTGAGAAGCCTCTGAGTAATTTTTCGAGGTGCAATTTACGAGTTGATAGTGATTCTCTCTTTCTATTTTGACATCAGAGGAACATGATCCGTGAGGCAACAACATTTTTGTTGGATGTTCTGACTTCTGAAGCCTAACCTTCCAGAGCATGGTTACCTGCAGACTAAGGTATTTGTTCCCTTCTCATTAAGGGACATCTTTATGCTTATACATTTTTCTTTGGTAAATACTAGCCATGAAATATTTTTGGCCCTTTTCATTGTCATTATGATTACAACAACTATGCCTCAAGAAGTTAACTTGGTAAGAAACTTATTGATGATAATAGAAAGTGACTGAAGCTCTTTAAAATATTAGAAAGTATCAAAACAAACAAGAAACTTCTTGATGATAATGGGAAGTGAACTTTGAATGTTGGGAAGTATTGGGGGCAATTTAGTGAGTGGAGTAAGACGAATGTGGAAAAGAGGAAATCAAGGCAAAGAAGAAACTTGTTGATGATAATAAAAAGTAATTGGAGCTTTTTGGGCCTTGTTGAAGTATCCAGGACAATTTAAGACATTTAGTATTATGAATGTGGCAAAGAAGTGGAATTTCAATTTAGAAATATTAGAGGAGTAAAAAGTGAGACATCTTCCTGCAGCCAATATGCACAAATGTTGAGTAAATGATTGTTGGGATTTATGGAGTTCTGATGATTGATAAAGAATGATGAAATACGTCGTCAACATGGTCTAAAGGTACAATATCATGAGCAATTGAATTCGGACAAACATTTAAAATAAATAAAAACAAGAATGCAAAAATCAAGAAATGGATAATGCCAATTTCATGATAAAACTCAAGGAAACAAAGTAGTGAAGAATTAAAGAGAAAGAATCAATGAGTTTGATTTGAAGAGGGAGTCTAAAGAGAAAAGGAGTTTAATTGAAGAAGTAGTACTCACTTGAAGTAGAATTTTAAGTCAAAAGAGTTTAAGTCAATGTGGAGTTTAAGGTGAAGTATAGTTCTATGAAGAATTGTTCTTTAATAGCGGTGAATTCGTTCAAAATAGTTGTGCACTTATCGATCAAAAAGGACAATTGAAATAATTGACTTCGTAAGTGTTATCAGCAAATTGAAGGAACACATTGAAGAACCTGGTCCTATTAGAGTTGATGCATTGGGAGTTCTTCTTTGTTATTGAGTCTTGATGAGTTCTAAACTGAATTAAGAGTGTTGTCTTCAAGTTGGGATAGCTCGAAGAGTTGGGAACACATACCTTGGAGGTTTGTATTGAAGTTTAGGAATTAAAGTTAGTTTCTAGGATTGTAGGAGTTAATAATCTAAATATACAAGCTTAGGAATTAGAAGTTCCTCGGATTGCAAGACTAGTAATATGAATCCATAATTTGAAATTTAGGAATTAAAGTTAGTTCCTTAGGTTATAGAGTTTGTAATCTTAAACGATTAAGGCTCATTGATTTAGTGAAGTTGGAGTTAAATCCTATAGGGGTACAATTCATGGTTTTTTACACCTTTTGAGTTGGGCATTCTTCACATAAAAATATTGCGTGCTTTTTGTTTACTATTCTTCTTACTTTATTTGAACATGTTAGGAAACTTGTTTTACCGCAATCAAGTCTCAAGGGCCAAGAGCTTATATGGGCCGCGCTTATATGCCTAGTTTTAAATGGGCTTAAAAAATCCTATATCAATCCTATCCCAATAACGAGTTGGGTTGGGCCGGCCCATGGGCTAAGCCTATTTTGACGGCTCTACTCAGTAGCTTTTGATTTTTAACTCTATATTTGTGTCAAAAAAAATCAACATAATATGTACAGCTAATATATCCCGGTTCCAATCATTGACTTGACTTAAAATTCAGAACAAATAAACTTAAAATTTCAATCCAACTTTGACTTAGATATCTTAGGTTTTTTTATGGTGCAATGCCATAGATTCATTTTACTGATGTATTATTTTAGTTCTTATACTTCTCTTCAAAATATAAATTCTTCTGTATGTTATAATTATCTCATATAGCCATTATAATTCTAGGGAAAATGATATATAGGAGTTGACTAATATCATTATGTAAAAGAAAGAGCTTAGGAGTTACTGCTATTTTCCACTAAGCAAGTTAAAGCCCACAGATTTCTGTTAATTAATTGTGTAGAAAAATTTTAGTGTTGACTAAGACTAGCGTTGAAACTAGTTTTCTTCTCAAAATCTTTTGAAATGTGATTCAATATTACATTTTCTACCTATTATACCCTCAATTTATTACTTTGAAAAAAATAAAACTTTTTTGAAATCTTGAGTTTTTATTTCATCTACTTCATAATTAATAGGGGTAAAATGGTAAACTCACTATGTCAATTATTGTTTTATTAATAGATATGTCAATTGAATGGAAAAGTAATTAAGGATAGCGCGAGTATTAGATTGCGAGTGTTTTGACTTGCAAATAAGTCAACACATTAAATGCTTTGACTTTTTTTTTTCCTTTTGCTTTTTTTGTTGATCTATATATTTCGTAGTTCACTGAAGAACAACCCTGCATCTAACTTCCAGTTCTTGTTTAATTTGCATTGTTCCATGGGTCGCACTAAGCTTGTGATGAAGAAAATTGAGGATCCAACATCCCGTCAACAGTTCTATTCAAAGCGCAAGGATACCATCCTTAAGAAGTCCAATGAGTTGGCTGTTTTATGTGATGTGGATGTTGGTCTTCTAATGTTTTCTCCAGCCGGCGAAGTGACTAGCTATTCTAGCAAAGAACGGTGAGTGAAATTTCTACGATGAACATTATATACGTTTCCTTTATAGTACATATTTTCATATGATTTTTTTTTTTGGTTGTTTAGTCTTGAGGATGTCATGCTCCTTGCTATGAACAAGGCTGGTGAACTGAACAAGCTGTATGTTTATTTCAATATGTCAGATACATGAATTAGACTTTGCCAATTCTAGTTTAACTGACCATTGATCTAAGTTTTTTTTTTGTTGTTGTTGAAGATCTCCTGAAAATCCAAATGAACAGGTACTGAGTTTTACGCATTGATCAGCAGTCTCTTCCGATAAGTCCTTGGAATTTCATCTGATCTTTTATTTTGCAGGCTTTGATGGACTCTCTCACACAATCAAAACATGAAGCCGAAATGGTGGAGAAGATAGCGATGTATACCACTCTCCTCTTGCACTCTGTGTATATATATTAGTCTATTAGTTTGTCAGAGCAGATACATGACTTCTCGAGTTCATTTCTTTTGCTTTTTGCTTTTTTTTTTTTGTATGGTATTTTCTACATGATTGAATAATTTTTTTCTTTTGTTGGGTATTTTTACGATGCTGATGATTGATCAACGTGCTTTAGTGTTGAGGTAAGATTAATATGTAGAAAGGGAATCACCTTCCGCCAATATTTGTTATTACTGAAAACTCGTAAATTGATATAGTTTTTTTTTTTTATGTATTTTCAAAACAGGCTCATGAGGAGAAGCTTAATGGGGTCAAAGAAAGACTAAGTGAAGCACAACAGAAAATAAGGTTGAAGAGTTGCTGACTCTATATTTCCTTCCTGTCTCTCTTTTTTTGATATTCTAAAAGATTTCCCTCTTTTATAATGATTTTTTCCGTTGGATCGAGTAGGTATTACGAACCACAAGTGGAGAGTATCAACTCTGTCCAAGAAGCTGATGCATA</genome_strand>
        <mrna_strand>GCCAGAGGCAAAATTTCATGTGAAACCTAAATATCCATAGCCCTCCGATCTGAAGCCTCTGATATCCTTCCATG.....................................................................................................GGTCTAATGTAATCCGAAGGCATAACTCAACTAGTATGTGGATGGACAGTACATTGCCTCCGGTCTATTTGATG........................................................................................................................TTATAATTCTCCTACCATTAAGTTCAATTTTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCAAGTCCACAATATGTAGAGTGTCCTCTTCCTTTTATGGAGTTATGGTCTAATAGCCAAAGAGGAAAAAGAACATCAAGAAGGAAAAGCTCTATGTGGTATTGAGGATTCTCATCAAATTAAAA...........................................................................................TGGATACTCTCTCCTAATAGAAAAGTTAACGAACAATTAATCATGAGGGAACTTCATGGCATTTGTAGCCTAACTTGAATAAGTTTCTTGGATTGGCTTGACCTAAATAGAAGGAAGCTCGAGCTACATTGCAAAAGCTTTTATCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTGATGAAGAAAATTGAGGATCCAACATCCCGTCAACAGTTCTATTCAAAGCGCAAGGATACCATCCTTAAGAAGTCCAATGAGTTGGCTGTTTTATGTGATGTGGATGTTGGTCTTCTAATGTTTTCTCCAGCCGGCGAAGTGACTAGCTATTCTAGCAAAGAACG....................................................................................TCTTGAGGATGTCATGCTCCTTGCTATGAACAAGGCTGGTGAACTGAACAAGCT.................................................................................................ATCTCCTGAAAATCCAAATGAACAG............................................................................GCTTTGATGGACTCTCTCACACAATCAAAACATGAAGCCGAAATGGTGGAGAAGATAGCGAT...................................................................................................................................................................................................TGTTGAG........................................................................................................GCTCATGAGGAGAAGCTTAATGGGGTCAAAGAAAGACTAAGTGAAGCACAACAGAAAATAAG......................................................................................................GTATTACGAACCACAAGTGGAGAGTATCAACTCTGTCCAAGAAGCTGATGCATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E320913" ref_strand="+" ref_description="SGN-E320913 [cTOB-13-I15]">
      <seq>aaaatttcatgtgaaacctaaatatccatagccctccgatctgaagcctctgatatccttccatgggtctaatgtaatccgaaggcataactcaactagtatgtggatggacagtacattgcctccggtctatttgatggtccgttactcaaacactccgattgtttcaatcgggttgatttgattatcattttcattcagtttttgaagtttttatcaaatgtgacattgagttctgcttggttgaacgttttggcagttataattctcctaccattaagttcaattttaaggtaatcttcattgatttttatgctctgttttgtcccattgtttagatggaatttataattctcccactgttaagttcacttctagctaatttttgttgatttatgggaaaaaagctcaggtgtcatgtactcttagctttgtaaaaagtgatattgtattttgagagtgtcgggttcgttcggttttcatttgattcagttctgaagatttaagtgttctgttatgctcggtttggttgtagttttagcaatttcactacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="91320" stop="92575"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91620" g_stop="91684" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="65" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91685" i_stop="91785" i_length="101">
            <donor d_prob="0.772" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91786" g_stop="92275" g_length="490"/>
          <reference_exon_boundary r_type="cDNA" r_start="66" r_stop="555" r_length="490" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E320913" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>555</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E320913" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91620" e_stop="91684"/>
          <exon e_start="91786" e_stop="92275"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATTTCATGTGAAACCTAAATATCCATAGCCCTCCGATCTGAAGCCTCTGATATCCTTCCATGGTAGTCTCTCTATCCCTCAGATCATGTTTCCATCGAAGCTCCTCTTGTTGTTGAGTATAAAAAAATTTAAGGTTTTGATTTCTCTGTCCCTGTTTTTTTAGGGTCTAATGTAATCCGAAGGCATAACTCAACTAGTATGTGGATGGACAGTACATTGCCTCCGGTCTATTTGATGGTCCGTTACTCAAACACTCCGATTGTTTCAATCGGGTTGATTTGATTATCATTTTCATTCAGTTTTTGAAGTTTTTATCAAATGTGACATTGAGTTCTGCTTGGTTGAACGTTTTGGCAGTTATAATTCTCCTACCATTAAGTTCAATTTTAAGGTAATCTTCATTGATTTTTATGCTCTGTTTTGTCCCATTGTTTAGATGGAATTTATAATTCTCCCACTGTTAAGTTCACTTCTAGCTAATTTTTGTTGATTTATGGGAAAAAAGCTCAGGTGTCATGTACTCTTAGCTTTGTAAAAAGTGATATTGTATTTTGAGAGTGTCGGGTTCGTTCGGTTTTCATTTGATTCAGTTCTGAAGATTTAAGTGTTCTGTTATGCTCGGTTTGGTTGTAGTTTTAGCAATTTCACTACTA</genome_strand>
        <mrna_strand>AAAATTTCATGTGAAACCTAAATATCCATAGCCCTCCGATCTGAAGCCTCTGATATCCTTCCATG.....................................................................................................GGTCTAATGTAATCCGAAGGCATAACTCAACTAGTATGTGGATGGACAGTACATTGCCTCCGGTCTATTTGATGGTCCGTTACTCAAACACTCCGATTGTTTCAATCGGGTTGATTTGATTATCATTTTCATTCAGTTTTTGAAGTTTTTATCAAATGTGACATTGAGTTCTGCTTGGTTGAACGTTTTGGCAGTTATAATTCTCCTACCATTAAGTTCAATTTTAAGGTAATCTTCATTGATTTTTATGCTCTGTTTTGTCCCATTGTTTAGATGGAATTTATAATTCTCCCACTGTTAAGTTCACTTCTAGCTAATTTTTGTTGATTTATGGGAAAAAAGCTCAGGTGTCATGTACTCTTAGCTTTGTAAAAAGTGATATTGTATTTTGAGAGTGTCGGGTTCGTTCGGTTTTCATTTGATTCAGTTCTGAAGATTTAAGTGTTCTGTTATGCTCGGTTTGGTTGTAGTTTTAGCAATTTCACTACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E375059" ref_strand="+" ref_description="SGN-E375059 [TUS-36-A21]">
      <seq>tgcgagtgtccaagtccacaatatgtagagtgtcctcttccttttatggagttatggtctaatagccaaagaggaaaaagaacatcaagaaggaaaagctctatgtggtattgaggattctcatcaaattaaaatggatactctctcctaatagaaaagttaacgaacaattaatcatgagggaacttcatggcatttgtagcctaacttgaataagtttcttggattggcttgacctaaatagaaggaagctcgagctacattgcaaaagcttttatcagcttgtgatgaagaaaattgaggatccaacatcccgtcaacagttctattcaaagcgcaaggataccatccttaagaagtccaatgagttggctgttttatgtgatgtggatgttggtcttctaatgttttctccagccggcgaagtgactagctattctagcaaagaacgtcttgaggatgtcatgctccttgctatgaacaaggctggtgaactgaacaagctatctcctgaaaaatccaaatgatcaggctttgatggactctctcacacaatcaaaacatgaagccgaaatggtggagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="92175" stop="104526"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92475" g_stop="92608" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="134" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92609" i_stop="92699" i_length="91">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.884" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92700" g_stop="92846" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="135" r_stop="281" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92847" i_stop="103667" i_length="10821">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103668" g_stop="103837" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="451" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="103838" i_stop="103921" i_length="84">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103922" g_stop="103975" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="452" r_stop="505" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="103976" i_stop="104072" i_length="97">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="104073" g_stop="104097" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="506" r_stop="531" r_length="26" r_score="0.880"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="104098" i_stop="104173" i_length="76">
            <donor d_prob="0.553" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="104174" g_stop="104226" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="532" r_stop="584" r_length="53" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E375059" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>583</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E375059" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92475" e_stop="92608"/>
          <exon e_start="92700" e_stop="92846"/>
          <exon e_start="103668" e_stop="103837"/>
          <exon e_start="103922" e_stop="103975"/>
          <exon e_start="104073" e_stop="104097"/>
          <exon e_start="104174" e_stop="104226"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCGAGTGTCCAAGTCCACAATATGTAGAGTGTCCTCTTCCTTTTATGGAGTTATGGTCTAATAGCCAAAGAGGAAAAAGAACATCAAGAAGGAAAAGCTCTATGTGGTATTGAGGATTCTCATCAAATTAAAAGTAAGTCATAAATTCAAGTTGTAATAGGAAATGTCTAACTATATAGTTATGGTGAGCCTCTGAGCATTGTGTAACTGATACATTGGTGCAGTGGATACTCTCTCCTAATAGAAAAGTTAACGAACAATTAATCATGAGGGAACTTCATGGCATTTGTAGCCTAACTTGAATAAGTTTCTTGGATTGGCTTGACCTAAATAGAAGGAAGCTCGAGCTACATTGCAAAAGCTTTTATCAGGTATGCCCTTGATTTTCATACATGTACTACCTGTGCTTAGATGGAGGTAGATCGTACGTATTTCAAAACCCTGAGAATAAAACTGGATATAGAGTATGTGAAATTTTATTCAGATGAATAAGTATAAAGGATAACCTTCGATATACAAGGTCATATTTTCAAATTGAATGACATGTACAATAGCCCTCTTAAACACTTTTTGAACACATATTAGGTGTTTAGCAAATATCAAAAAAGGAAAGAGACATTCTTTTTTAGACGGACTACAAGGGAATGTAAGACAAACAAATTGAAACGGAAGGAGGAAGTAATTTCTTTCATATTAATGAACCTGTTAGTATTGGGTATCAGGGGACAATATCTTTCCCAGTAATTGTTTTTAAGACATCCCCATAAATTGAATTGATTTTATGACACAATGGAAGCCACTACTTGTAGTTTGTTTAGATTGATAAATACTCCTTGGAAATCTCTGTGAATTGTATGATTTTAGTACTAACGTTCGCTAAAGATTCCAAAACCTTTTGAGATTACAACACCAAAAATCATTAGCCTATCTTGTTGCTTAGCTCATGAATTGGCAGAATTGCAGAAGGACTAAGTATCACTTGTTGTGAAAGATTCCAAATCTCCTATTAATTGTGAATAGAGGATACAGATTAGTAGGCATAGCTTTTGGGTGAAGTAGCTTATGGGCGGAATATATGCTGAATAGAAGGAAAATGATTAAATTTGAGGCTTGAGACACAAAGAGGAAGAGGTTGGGATATGATAGGCTTAGAAAAATTGATTTTTTTTAAAAAAGGCTCCCACACACGAATCCCAATGTAATTTTTAAATCAACTCCCAACCTTTAACCCCACCCGCGATTCTTCTGTTCAAAGGAAGCCTCCCTCCCTCTTTCTTTTCTGAAAATCTCCTTCCACCAAAGCCTCTTCGAGACACCCGCGGCTCAATCCCAAAAAGAGTCATCACCAGAAAGTCCCTCACGCACTCGCATGCGCCACCACTTCTTCTCAGTCTTCGACGTCACGTGAGGCACGCGCCGGCGCGTGAGTCGACAAAACTCAAAATTCCTTCTTTTTTGTCGTTCGATCCAGGCCACAAGGGATTTCACCTCCCACTCCTCTTTCGTTTAAAGCACTTTCGTCTCTTTTCTTCAATTTTAAGGGGAGAGATGGATAGCATAATCTTTTTCAAATTAGGGTAAGTCTTATGACTTAACTGATAACGAGCTAGCCTCTGATTCTAGGTTTAAATGGGTAGAGAGTGTTGCATGGTATGTGAGAAAAATGAATTTGAGTAGAGTAGCTCTACAGTGGCTATGCAGAAGATTCAATGAAGCTTCAGAAATCAAAGGAAAATTCTTCAAAACTTGGAGATGCAGAGATTTAACTACTCTTATTTATTTCTCTTTGAAGTACAATAAATATGGTAGATTTATGTGTGTTATTACTGTTAAAGGAGAGATGACCTCTTCTTCTCAGACTTCGACGTCACACGCGACACGCGCTGGTGTGTGAGTCGACAAAACTCAGAATCCCTTCTTTTTTTGTGGTTCAATCCAGGCCACAAGGGATTTCACCTCCCACTCCGCTTCCGTTTAAAGCACTTTCTTTTCTTTTCTTCAATTTTCAGGGGGGAAATGGACAACATAATCTTTTTCAAATTAGGGAGTAAGTCTTATGACTTAACTAATACCAAGCTAGCCTCAGATTCTAGGTTTGAATGGGTAGAGAGTGTTGGGCGGTATGTGAGAAAAATGAAGTTGAGTAGAGTAGCTCTACATTTCCTATGCAGAAGATTTAATGAAGCTTCAGAATTCAAAGGAAAATACTTCAAAACTTGGAGATGCAGAGATTTAACTATTATTTATTGCTCTTTGAAGTACAATAAATATGGTAGATTTATGTCTGTTATTATTGTTAAGGGAGAGCTGACCACTTCTTCTCAGACTTTGACGTCACGCGCTACACGCGTCGGCGCGTGAGTCGACAAAACTCAGAATTCCTTCTTTTTTGTGGTTCGCTCCACGCCACAAGGGATTTCACCTCCCACTTCACTTTCGTTTAAATTACTTTCGTCTCTTTTCTTCAATTTTCAGGGGAGAGGTGGATAGCATAATCTATTTCAAATTAGGGGGTAAGTCTTATGACTTAACTGATAACGAGCTAGCCTCTGATTCTAGGTTTAAATGAGCGGAGAGTGTTGCATGATATGTGAGAAAAAATGAAGTTGAGTAGAGTAGCTCTACAGTTGCCATGCAGAAGATTTAATGAAGCTTCATAAATCAAAGGAAAATCCTTCAAAACTTGGAGATGCAGAGATTTAACTACTCTTATTTATTGCTCTTTGAAGTACAATAAATATGGTAGATTTATTTATGTTATTACTGTTAAAGGAGAGATGACCTCTTCTTCTCAGACTTCGACGTCACACGCGACACGCGCTGGTGTGTGAGTCGACAAAACTCAGAATCCCTTCTTTTTTTGTGGTTCAATCCAGGCCACAAGGGATTTCACCTCCCACTCCGCTTCCGTTTAAAGCACTTTCTTTTCTTTTCTTCAATTTTCAGGGGGGAAATGGACAACATAATTTTTTTCAAATTAGGGAGTAAGTCTTATGACTTAACTAATACCAAGCTAGCCTCAGATTCTAGGTTTGAATGGGTAGAGAGTGTTGGGCGGTATGTGAGAAAAATGAAGTTGAGTAGAGTAGCTCTACATTTCCTATGCAGAAGATTTAATGAAGCTTCAGAATTCAAAGGAAAATACTTCAAAACTTGGAGATGCAAAGATTTAACTATTATTTATTGCTCTTTGAAGTACAATAAATATGGTAGATTTATGTCTGTTATTATTGTTAAGGGAGAGCTGACCACTTCTTCTCAGACTTCGACGTCACGCGCTACACGCGTCGGCGCGTGAGTCGACAAAACTCAGAATTCCTTCTTTTTTGTGGTTCGCTCCACGCCACAAGGGATTTCACCTCCCACTTCACTTTCGTTTAAATTACTTTCTTTTCTTTTCTTCAATTTTCAGGGGAGAGGTGGATAACAAAATCTATTTCAAATTAGGGGGTAAGTCTTATGACTTAACTGATAACGAGCTAGCTCTGATTCTAGGTTTGAATGAGCGGAGAGTGTTGCGTGATATGTGAGAAAAAATGAAGTTGAGTAGAGTAGCTCTACAGTTGCTATGCAGAAGATTTAATGAAGCTTCATAAATCAAAGGAAAATCCTTCAAAACTTGGAGATGCAAAGATTTAACTACTCTTATTTATTGCTCTTTCAAGTACAATAAATATGGTAGATTTATGTCTGTTATTACTGTAAAAGGAGAGATGACCCCTTCTTCTAAGACTTCGACGTCACGCGCGGACAACTTTCGCGCGTGAGTCGACAAAACTCAGAGTTCCTTTTTTTTTGGTTCGATCCAGACCACAAGGGATTTCACCTCTCATTTCACTTTCGTTTAAAGTACTTTCTTTTCTTTTCTTCAATTTTTAGGGGAGAGATGGATAACAAAATCTTTTTCAAATTATGGGGTAATTCTTAAGACTTAAATGATAACGAGCTAGCTCTGATTCTAGGTTTGAATGGGTGGAGGGTGTTGCACGGTATGTGAGAAAAATGAAGTTGAGTAGAGTAGCTCTACAATGGCTATGCAGAAGATTTAATGAAGCTTCAGAAATTAAAGGAAAATCCTTCAAAACTTGGAGATGCAGAGATTTAACTACTCTTATTTATTGCTCTTTGAAGTACAACAAATATGGTAGATTTATGTCTGTTATTACTGTTAAAGGAGAGATGACCTCTTCTTCTCAGACTTTGACGTCACACGCGACACGCGCTGGTGCGTGAGTTGACAAAACTCAGAATCCCTTCTTTTTTTGTGGTTCAATCCAGGCCACAAGGGATTTCACCTCCCACTCCGCTTTCGTTTAAAGCACTTTCTTTTCTTTTCTTCAATTTTCAGGGGGGAAATGGACAACATAATCTTTTTCAAATTAGGGGGTAAGTCTTATGACTTAACTAATACCAAGCTAGCCTCAAATTCTAGGTCTGAATGGGTGGAGAGTGTTGGGCGGTATGTGAGAAAAATGAAGTTGAGTAGAGTAGCTCTACATTTCTTATGCAGAAGATTTAGTGAAGCTTCAGAATTCAAAGGAAAATACTTCAAAACTTGGAGATGCAGAGATTTAACTATTATTTATTGCTCTTTGAAGTATAATAAATATGGTAGATTTATGTCTGTTATTATTGTTAAGGGAGAGCTGACCACTTATTCTCAAACTTCGACGTCACGCGCCGGTGCGTGAGTCGACAAAACTCAGAATTCCTTCTTTTTTGTGGTTCGCTCCAGGCCACAAGGGATTTCACCTCCCACTTCGCTTTCGTTTAAAGTACTTTCTATTCTTTTCTTCAATTTTCAGGGGAGAGATGGATAACAAAATCTATTTCAAATTGAGGGGTAAGTCTTATGACTTAAATGAAACGAGCTAGCTCTGATTCTAGGTTTGAATGGGCGGAGAGTGTTGCGCGGTATGTGAGAAAAATGAAGTTGAGTAGAGTAGCTCTACAGTGGCTATGCAGGAGATTTAATGAAGCTTCATAATTCAAAGGAAAATCCTTCAAAACTTGGAGATGCAGAGATTTAACTACTCTTATTTATTGCTCTTTGAAGTACAATAAATATGGTAGATTTATGTATGTTATTACTGTTAAAGGAGAGATGACCCCTTCTTCTCAGACTTCGACGTCACGCGCGACACGCTTCCGCGCGTGAGTCGACAAAACTCAGAGTTCCTTTTTTTATTGGTTCGATCCAGGCCACAAGGGATTTCACCTCCCAATTCGCTTTCGTTTGAAGCACTTTCGTCTGTTTTCTTCAATTTTTAGGGGAGAGATGGATAACAAAATCTTTTTCAAATTAGGGGTAAGTCTTATGACTTAACTGATAACGAGCTAGCTCAAATTTTAGGTTTGAATGGGCGGAGAGTGTCGCGCAGTATGTGAGAAAAATGAAGTTGAGTAGAGTAGTTCTACAGTGGCTATGCAGACGATTTAATGAAACTTCAGAAATCAAAGGAAAATCCTTCAAAACTTGGAGATGCAGAGATTTAACTACTCTTATTTATTGCTCTTTGAAGTACAATAAATATGGTAGATTTATGTCTTTTATTACTGTTAAAGGAGAGATGACCCCTTCATCTCAGACTTTGACGTCACGCGCGACACGCTTCCGCGCGTGAGTCGACAAAACTCAGAGTTCCCTTTTTTTTGGTTCGATCCAAGCCACAAGGGATGTAACCTCCCACTTCGCTTTCGTTTAAAGTACTTTCTTTTCTTTTCATCAATTTTTAGGGGAGAGATGGATAACAAAATCTTTTTCAAATTAAGGGGTAAGTCTTATGACTTATCTGATAACGAGCTAGCTCTCATTCTAGGTTTGAATGGGCGGAGAGTGTAGCACGGTATGTGAGAAAAATGAAGTTGAGTAGAGTAGCTCTACAGTGGCTATGTAGAAGATTTAATGAAGCTTCTGAAATCAAAGGAAAATCCTTCAAAACTTTGAGATGCAGAGATTTAACTACTCTTGTTTATTGCTCTTTGAAGTACAATAAATAGGCAGATTTATGTCTGTTATTACTGTTAAGAGAGAGCTGACCACTTCTTCAAGACTTCGATGTCACGCGCGACACGCGCCGACGCGTGAGTTGATAAAACTCAGAATTCCTTCTTTTTTGGGGTTCGATCCAGGCCACAAGGGATTTCACCTCCCACTCCGCTTTCGTTTAAAGCACTTTCTTTTCTTTTCTTCAATTTTCAGGGGAGAGATGTATAACAAAATCTTTTTCAAATTAGGGGGTAAGTCTTATGACTTAACTAATACCAAGCTAGCCTCAGATTCTAGGTTTGAATGGGTGGAGAGTGTTGGGCGGTATGTGAGAAAAATGAAGTTGAGTAGAGTAGCTCTACATTTCCTATGCATAAGATTTAATGAAGCTTCATAAATCGAAGGAAAATCCTTCAAAACTTGGAGATGCAAATTAGTGAATAATCACCAAATGTCCTTTATTCAAGGAAGACAAATTATGGATGTCGTGTCAATAGCAAGTGAGTGTGTAGATTCAAGGATTAAAGGAGAGATCCCAATAATTATGAGCAAGCTTGATATAGAAAAGGCATATGATCATGTCAATTGGGAGTTTCTACTTAATATCTTGAGGCAGATGGGATTTGGAGACAAATGACTTAAATGGATAGGTTTTTGCATCAAAACTGTCAGGTTCTTCATACTTGTTAATGGAGAACCTTATGAAGAGTCTGTTGGTCTTTTTCCCTCTGAGAGAGTAGAGAGGATTACAACAGGGACATCCTCTCTCTTCTTTCTTATTTATTTTAGCTATGGAGGGTCTTAACAGTATGATTAGAGTGGCCAATCAAAAGGACTAGATAAAGGGTTTCAACATTGGTAATCAATTAGGGGTCATTTTGCAAATAAGTCACCTTTATATGCAAATGACACACTAATATTTTGTGATGCAAAGGCAGAACAAGTTAGTTACATTAGAGTTGTTTTGGTGATTTCTGAGGCCATCTCTGGATTGGCTGTGAACTGGGGGAGAAGCAGCATCTTCCAAGTCAAGGAAGTGACAAATATTCAGATGTTGGCAAAAATTTTGCAATGCAAGATAGAGCACTTACCAATTACTTACCTGGGAATGCCTTTGGGGAATAATCACAAGGTTTTGTTTATTTGGGATGGAATCATTGAGAAGACAGTGAAGAGGTTGGCTAATTTGAAGGCAAACTATCTGTCTCTGGGAGGAAGAGTCCCTCTGATCAATTCGGTCCTAGATGCGTTGCCTACATATATTATGTCACTTTTCCCTTTACCAACAAAAGGTAGAAGAGAGATTGGATAAGTTGAAGTGTAATTTCCTATGGTCGGGGAACAAAGAAGGCAAAAAATACACTTAGTTAAATGACAGACAACCTTACTGAGCAAGAAGACTGGGGGTCTTCCCATAATAAAATGAAGAGTCTTGAATAAAAGTCTACTTTCTAAATGGCTTTGGAGATTCGTGGTTGAAAATCAGGCATTATGGAGAAGAGCAATTCTCAACAAGTATGGGTAGACCAAGGAGTGGGTGTCTAATGTAGTAGATAGCACGTATGGGGTATCAATTTAGATATCAATCAGAAATTTATGGGATAGTCTAAACTCTAAAGAAGAATTTAGTGGTCAAGGTAGGAGAGGGTAGCAAAATATTTTTTTTGGAAGGACAAGTTAATTGGACAAGAGTGTCTAAACTTAGTCTTCCCCGATCTCTTTTCGTTTTGTACCAACCTTGAGGCTAAAATTGCTGAGATTTGGTCTCCTCAGGAAAAGAACCTCACATTTAGGAGAAATCTAAATGATTGGGAAGTGGATAGAATTGCTGAACTGCTACTCAAATTAGGTGAATTCATGGGCCTTACTACAGAAGCAGATGGTATAAGATGAAAACATGACTCTGATGGCAAATTCTCTTTGCGTCGAGTATATAGGAGAGAGGTCATGACTCACTTCGGGGAATTCATGGTCCATGGAAACAAATATGGAAAGGCAACACCCCAACCAAGGTGAAATGCTTCACCTGGTTGGTCACTAAAAGGGCATGTCTCACTCAGGAAAAACTCAAGAAAAGAGGCTTTCAGATTGTCTCCAGAAGTGTTTTTTGGTCATGAGAAGGAAGAAACTAACAACCACTTATTCCTACACTGTAAGGTTATTGTTTAGGTGTGGCGCATGGTCTACAACATTTCTCAAAAGCCCTAGGTGATGCCAGAATATACTGCTGATCTTTTGAGCTGCTGGATAAGGAGGGGGGAGAGAGACCCAAAAAAGATGGTGGGCTATTTGGAGAGAAAGAAACCTTAGGTTCCATGAGAATATTACTAACAATATGCAGAAAGTTAAAGAAAATTGCATCAACATGTTTTTTTGGTGTAAATAAGAGGTATAGAAGTAGTAGATCAGTTGATAGATTTCCTAGGATCAATGTAATTATAGTTTTAGCTTGCAACTTTTTGGAGGTAGCCAGCATACCCTTAATGCTGAAGAGTACAACTTTAACTTTGTCAAAAAAAAAAACAAGAGGAAGAGGTTGGGGTTGAGCGTAATGGGCTTCAAAGCAACTACTTTAGGTGATATTAATGATGTTAAATGGTTGATGTGGTTGAGAAGCCTCTGAGTAATTTTTCGAGGTGCAATTTACGAGTTGATAGTGATTCTCTCTTTCTATTTTGACATCAGAGGAACATGATCCGTGAGGCAACAACATTTTTGTTGGATGTTCTGACTTCTGAAGCCTAACCTTCCAGAGCATGGTTACCTGCAGACTAAGGTATTTGTTCCCTTCTCATTAAGGGACATCTTTATGCTTATACATTTTTCTTTGGTAAATACTAGCCATGAAATATTTTTGGCCCTTTTCATTGTCATTATGATTACAACAACTATGCCTCAAGAAGTTAACTTGGTAAGAAACTTATTGATGATAATAGAAAGTGACTGAAGCTCTTTAAAATATTAGAAAGTATCAAAACAAACAAGAAACTTCTTGATGATAATGGGAAGTGAACTTTGAATGTTGGGAAGTATTGGGGGCAATTTAGTGAGTGGAGTAAGACGAATGTGGAAAAGAGGAAATCAAGGCAAAGAAGAAACTTGTTGATGATAATAAAAAGTAATTGGAGCTTTTTGGGCCTTGTTGAAGTATCCAGGACAATTTAAGACATTTAGTATTATGAATGTGGCAAAGAAGTGGAATTTCAATTTAGAAATATTAGAGGAGTAAAAAGTGAGACATCTTCCTGCAGCCAATATGCACAAATGTTGAGTAAATGATTGTTGGGATTTATGGAGTTCTGATGATTGATAAAGAATGATGAAATACGTCGTCAACATGGTCTAAAGGTACAATATCATGAGCAATTGAATTCGGACAAACATTTAAAATAAATAAAAACAAGAATGCAAAAATCAAGAAATGGATAATGCCAATTTCATGATAAAACTCAAGGAAACAAAGTAGTGAAGAATTAAAGAGAAAGAATCAATGAGTTTGATTTGAAGAGGGAGTCTAAAGAGAAAAGGAGTTTAATTGAAGAAGTAGTACTCACTTGAAGTAGAATTTTAAGTCAAAAGAGTTTAAGTCAATGTGGAGTTTAAGGTGAAGTATAGTTCTATGAAGAATTGTTCTTTAATAGCGGTGAATTCGTTCAAAATAGTTGTGCACTTATCGATCAAAAAGGACAATTGAAATAATTGACTTCGTAAGTGTTATCAGCAAATTGAAGGAACACATTGAAGAACCTGGTCCTATTAGAGTTGATGCATTGGGAGTTCTTCTTTGTTATTGAGTCTTGATGAGTTCTAAACTGAATTAAGAGTGTTGTCTTCAAGTTGGGATAGCTCGAAGAGTTGGGAACACATACCTTGGAGGTTTGTATTGAAGTTTAGGAATTAAAGTTAGTTTCTAGGATTGTAGGAGTTAATAATCTAAATATACAAGCTTAGGAATTAGAAGTTCCTCGGATTGCAAGACTAGTAATATGAATCCATAATTTGAAATTTAGGAATTAAAGTTAGTTCCTTAGGTTATAGAGTTTGTAATCTTAAACGATTAAGGCTCATTGATTTAGTGAAGTTGGAGTTAAATCCTATAGGGGTACAATTCATGGTTTTTTACACCTTTTGAGTTGGGCATTCTTCACATAAAAATATTGCGTGCTTTTTGTTTACTATTCTTCTTACTTTATTTGAACATGTTAGGAAACTTGTTTTACCGCAATCAAGTCTCAAGGGCCAAGAGCTTATATGGGCCGCGCTTATATGCCTAGTTTTAAATGGGCTTAAAAAATCCTATATCAATCCTATCCCAATAACGAGTTGGGTTGGGCCGGCCCATGGGCTAAGCCTATTTTGACGGCTCTACTCAGTAGCTTTTGATTTTTAACTCTATATTTGTGTCAAAAAAAATCAACATAATATGTACAGCTAATATATCCCGGTTCCAATCATTGACTTGACTTAAAATTCAGAACAAATAAACTTAAAATTTCAATCCAACTTTGACTTAGATATCTTAGGTTTTTTTATGGTGCAATGCCATAGATTCATTTTACTGATGTATTATTTTAGTTCTTATACTTCTCTTCAAAATATAAATTCTTCTGTATGTTATAATTATCTCATATAGCCATTATAATTCTAGGGAAAATGATATATAGGAGTTGACTAATATCATTATGTAAAAGAAAGAGCTTAGGAGTTACTGCTATTTTCCACTAAGCAAGTTAAAGCCCACAGATTTCTGTTAATTAATTGTGTAGAAAAATTTTAGTGTTGACTAAGACTAGCGTTGAAACTAGTTTTCTTCTCAAAATCTTTTGAAATGTGATTCAATATTACATTTTCTACCTATTATACCCTCAATTTATTACTTTGAAAAAAATAAAACTTTTTTGAAATCTTGAGTTTTTATTTCATCTACTTCATAATTAATAGGGGTAAAATGGTAAACTCACTATGTCAATTATTGTTTTATTAATAGATATGTCAATTGAATGGAAAAGTAATTAAGGATAGCGCGAGTATTAGATTGCGAGTGTTTTGACTTGCAAATAAGTCAACACATTAAATGCTTTGACTTTTTTTTTTCCTTTTGCTTTTTTTGTTGATCTATATATTTCGTAGTTCACTGAAGAACAACCCTGCATCTAACTTCCAGTTCTTGTTTAATTTGCATTGTTCCATGGGTCGCACTAAGCTTGTGATGAAGAAAATTGAGGATCCAACATCCCGTCAACAGTTCTATTCAAAGCGCAAGGATACCATCCTTAAGAAGTCCAATGAGTTGGCTGTTTTATGTGATGTGGATGTTGGTCTTCTAATGTTTTCTCCAGCCGGCGAAGTGACTAGCTATTCTAGCAAAGAACGGTGAGTGAAATTTCTACGATGAACATTATATACGTTTCCTTTATAGTACATATTTTCATATGATTTTTTTTTTTGGTTGTTTAGTCTTGAGGATGTCATGCTCCTTGCTATGAACAAGGCTGGTGAACTGAACAAGCTGTATGTTTATTTCAATATGTCAGATACATGAATTAGACTTTGCCAATTCTAGTTTAACTGACCATTGATCTAAGTTTTTTTTTTGTTGTTGTTGAAGATCTCCTG-AAAATCCAAATGAACAGGTACTGAGTTTTACGCATTGATCAGCAGTCTCTTCCGATAAGTCCTTGGAATTTCATCTGATCTTTTATTTTGCAGGCTTTGATGGACTCTCTCACACAATCAAAACATGAAGCCGAAATGGTGGAGAA</genome_strand>
        <mrna_strand>TGCGAGTGTCCAAGTCCACAATATGTAGAGTGTCCTCTTCCTTTTATGGAGTTATGGTCTAATAGCCAAAGAGGAAAAAGAACATCAAGAAGGAAAAGCTCTATGTGGTATTGAGGATTCTCATCAAATTAAAA...........................................................................................TGGATACTCTCTCCTAATAGAAAAGTTAACGAACAATTAATCATGAGGGAACTTCATGGCATTTGTAGCCTAACTTGAATAAGTTTCTTGGATTGGCTTGACCTAAATAGAAGGAAGCTCGAGCTACATTGCAAAAGCTTTTATCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTGATGAAGAAAATTGAGGATCCAACATCCCGTCAACAGTTCTATTCAAAGCGCAAGGATACCATCCTTAAGAAGTCCAATGAGTTGGCTGTTTTATGTGATGTGGATGTTGGTCTTCTAATGTTTTCTCCAGCCGGCGAAGTGACTAGCTATTCTAGCAAAGAACG....................................................................................TCTTGAGGATGTCATGCTCCTTGCTATGAACAAGGCTGGTGAACTGAACAAGCT.................................................................................................ATCTCCTGAAAAATCCAAATGATCAG............................................................................GCTTTGATGGACTCTCTCACACAATCAAAACATGAAGCCGAAATGGTGGAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E228191" ref_strand="+" ref_description="SGN-E228191 [cLED-2-O1]">
      <seq>tgcgagtgtccaagtccacaatatgtaaagtgtcctcttccttttatggagttatggtctaatagcccaagaggaaaaagaacatcaagaacgaaaagctctatgtgggattgaggattctcatcaaattaaaatggatactctctcctaatagaaaagttaacgaacaattaatcatgacggaacttcatggcatttgctgcctaacttgcataaggttcttggatcggcttgacctaaatagaaggaacctcgagctacattgcaaaagcttttatcagcttgtgatgaacaaaattgaggatccaacatgccgtctacagttctattcaaagcgcaaggataccatgcttaagaagtccaatgagttggctgttttatgtgatgtggatgttggtcttctaacgtttgctccagccggcgatacgactatctattctagcaaagaacgtcttgaggatgtcatgctccttgctatgaacaaggctggtgaactgaacaagctatctcctgaaaatccaaatgaacaggctttgatggactctctcacacaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="92175" stop="104498"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92475" g_stop="92608" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="134" r_length="134" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92609" i_stop="92699" i_length="91">
            <donor d_prob="0.957" d_score="0.96"/>
            <acceptor a_prob="0.884" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92700" g_stop="92846" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="135" r_stop="281" r_length="147" r_score="0.952"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92847" i_stop="103667" i_length="10821">
            <donor d_prob="0.985" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103668" g_stop="103837" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="451" r_length="170" r_score="0.941"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="103838" i_stop="103921" i_length="84">
            <donor d_prob="0.994" d_score="0.88"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103922" g_stop="103975" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="452" r_stop="505" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="103976" i_stop="104072" i_length="97">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="104073" g_stop="104097" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="506" r_stop="530" r_length="25" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="104098" i_stop="104173" i_length="76">
            <donor d_prob="0.553" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="104174" g_stop="104198" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="531" r_stop="555" r_length="25" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E228191" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>555</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E228191" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92475" e_stop="92608"/>
          <exon e_start="92700" e_stop="92846"/>
          <exon e_start="103668" e_stop="103837"/>
          <exon e_start="103922" e_stop="103975"/>
          <exon e_start="104073" e_stop="104097"/>
          <exon e_start="104174" e_stop="104198"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCGAGTGTCCAAGTCCACAATATGTAGAGTGTCCTCTTCCTTTTATGGAGTTATGGTCTAATAGCCAAAGAGGAAAAAGAACATCAAGAAGGAAAAGCTCTATGTGGTATTGAGGATTCTCATCAAATTAAAAGTAAGTCATAAATTCAAGTTGTAATAGGAAATGTCTAACTATATAGTTATGGTGAGCCTCTGAGCATTGTGTAACTGATACATTGGTGCAGTGGATACTCTCTCCTAATAGAAAAGTTAACGAACAATTAATCATGAGGGAACTTCATGGCATTTGTAGCCTAACTTGAATAAGTTTCTTGGATTGGCTTGACCTAAATAGAAGGAAGCTCGAGCTACATTGCAAAAGCTTTTATCAGGTATGCCCTTGATTTTCATACATGTACTACCTGTGCTTAGATGGAGGTAGATCGTACGTATTTCAAAACCCTGAGAATAAAACTGGATATAGAGTATGTGAAATTTTATTCAGATGAATAAGTATAAAGGATAACCTTCGATATACAAGGTCATATTTTCAAATTGAATGACATGTACAATAGCCCTCTTAAACACTTTTTGAACACATATTAGGTGTTTAGCAAATATCAAAAAAGGAAAGAGACATTCTTTTTTAGACGGACTACAAGGGAATGTAAGACAAACAAATTGAAACGGAAGGAGGAAGTAATTTCTTTCATATTAATGAACCTGTTAGTATTGGGTATCAGGGGACAATATCTTTCCCAGTAATTGTTTTTAAGACATCCCCATAAATTGAATTGATTTTATGACACAATGGAAGCCACTACTTGTAGTTTGTTTAGATTGATAAATACTCCTTGGAAATCTCTGTGAATTGTATGATTTTAGTACTAACGTTCGCTAAAGATTCCAAAACCTTTTGAGATTACAACACCAAAAATCATTAGCCTATCTTGTTGCTTAGCTCATGAATTGGCAGAATTGCAGAAGGACTAAGTATCACTTGTTGTGAAAGATTCCAAATCTCCTATTAATTGTGAATAGAGGATACAGATTAGTAGGCATAGCTTTTGGGTGAAGTAGCTTATGGGCGGAATATATGCTGAATAGAAGGAAAATGATTAAATTTGAGGCTTGAGACACAAAGAGGAAGAGGTTGGGATATGATAGGCTTAGAAAAATTGATTTTTTTTAAAAAAGGCTCCCACACACGAATCCCAATGTAATTTTTAAATCAACTCCCAACCTTTAACCCCACCCGCGATTCTTCTGTTCAAAGGAAGCCTCCCTCCCTCTTTCTTTTCTGAAAATCTCCTTCCACCAAAGCCTCTTCGAGACACCCGCGGCTCAATCCCAAAAAGAGTCATCACCAGAAAGTCCCTCACGCACTCGCATGCGCCACCACTTCTTCTCAGTCTTCGACGTCACGTGAGGCACGCGCCGGCGCGTGAGTCGACAAAACTCAAAATTCCTTCTTTTTTGTCGTTCGATCCAGGCCACAAGGGATTTCACCTCCCACTCCTCTTTCGTTTAAAGCACTTTCGTCTCTTTTCTTCAATTTTAAGGGGAGAGATGGATAGCATAATCTTTTTCAAATTAGGGTAAGTCTTATGACTTAACTGATAACGAGCTAGCCTCTGATTCTAGGTTTAAATGGGTAGAGAGTGTTGCATGGTATGTGAGAAAAATGAATTTGAGTAGAGTAGCTCTACAGTGGCTATGCAGAAGATTCAATGAAGCTTCAGAAATCAAAGGAAAATTCTTCAAAACTTGGAGATGCAGAGATTTAACTACTCTTATTTATTTCTCTTTGAAGTACAATAAATATGGTAGATTTATGTGTGTTATTACTGTTAAAGGAGAGATGACCTCTTCTTCTCAGACTTCGACGTCACACGCGACACGCGCTGGTGTGTGAGTCGACAAAACTCAGAATCCCTTCTTTTTTTGTGGTTCAATCCAGGCCACAAGGGATTTCACCTCCCACTCCGCTTCCGTTTAAAGCACTTTCTTTTCTTTTCTTCAATTTTCAGGGGGGAAATGGACAACATAATCTTTTTCAAATTAGGGAGTAAGTCTTATGACTTAACTAATACCAAGCTAGCCTCAGATTCTAGGTTTGAATGGGTAGAGAGTGTTGGGCGGTATGTGAGAAAAATGAAGTTGAGTAGAGTAGCTCTACATTTCCTATGCAGAAGATTTAATGAAGCTTCAGAATTCAAAGGAAAATACTTCAAAACTTGGAGATGCAGAGATTTAACTATTATTTATTGCTCTTTGAAGTACAATAAATATGGTAGATTTATGTCTGTTATTATTGTTAAGGGAGAGCTGACCACTTCTTCTCAGACTTTGACGTCACGCGCTACACGCGTCGGCGCGTGAGTCGACAAAACTCAGAATTCCTTCTTTTTTGTGGTTCGCTCCACGCCACAAGGGATTTCACCTCCCACTTCACTTTCGTTTAAATTACTTTCGTCTCTTTTCTTCAATTTTCAGGGGAGAGGTGGATAGCATAATCTATTTCAAATTAGGGGGTAAGTCTTATGACTTAACTGATAACGAGCTAGCCTCTGATTCTAGGTTTAAATGAGCGGAGAGTGTTGCATGATATGTGAGAAAAAATGAAGTTGAGTAGAGTAGCTCTACAGTTGCCATGCAGAAGATTTAATGAAGCTTCATAAATCAAAGGAAAATCCTTCAAAACTTGGAGATGCAGAGATTTAACTACTCTTATTTATTGCTCTTTGAAGTACAATAAATATGGTAGATTTATTTATGTTATTACTGTTAAAGGAGAGATGACCTCTTCTTCTCAGACTTCGACGTCACACGCGACACGCGCTGGTGTGTGAGTCGACAAAACTCAGAATCCCTTCTTTTTTTGTGGTTCAATCCAGGCCACAAGGGATTTCACCTCCCACTCCGCTTCCGTTTAAAGCACTTTCTTTTCTTTTCTTCAATTTTCAGGGGGGAAATGGACAACATAATTTTTTTCAAATTAGGGAGTAAGTCTTATGACTTAACTAATACCAAGCTAGCCTCAGATTCTAGGTTTGAATGGGTAGAGAGTGTTGGGCGGTATGTGAGAAAAATGAAGTTGAGTAGAGTAGCTCTACATTTCCTATGCAGAAGATTTAATGAAGCTTCAGAATTCAAAGGAAAATACTTCAAAACTTGGAGATGCAAAGATTTAACTATTATTTATTGCTCTTTGAAGTACAATAAATATGGTAGATTTATGTCTGTTATTATTGTTAAGGGAGAGCTGACCACTTCTTCTCAGACTTCGACGTCACGCGCTACACGCGTCGGCGCGTGAGTCGACAAAACTCAGAATTCCTTCTTTTTTGTGGTTCGCTCCACGCCACAAGGGATTTCACCTCCCACTTCACTTTCGTTTAAATTACTTTCTTTTCTTTTCTTCAATTTTCAGGGGAGAGGTGGATAACAAAATCTATTTCAAATTAGGGGGTAAGTCTTATGACTTAACTGATAACGAGCTAGCTCTGATTCTAGGTTTGAATGAGCGGAGAGTGTTGCGTGATATGTGAGAAAAAATGAAGTTGAGTAGAGTAGCTCTACAGTTGCTATGCAGAAGATTTAATGAAGCTTCATAAATCAAAGGAAAATCCTTCAAAACTTGGAGATGCAAAGATTTAACTACTCTTATTTATTGCTCTTTCAAGTACAATAAATATGGTAGATTTATGTCTGTTATTACTGTAAAAGGAGAGATGACCCCTTCTTCTAAGACTTCGACGTCACGCGCGGACAACTTTCGCGCGTGAGTCGACAAAACTCAGAGTTCCTTTTTTTTTGGTTCGATCCAGACCACAAGGGATTTCACCTCTCATTTCACTTTCGTTTAAAGTACTTTCTTTTCTTTTCTTCAATTTTTAGGGGAGAGATGGATAACAAAATCTTTTTCAAATTATGGGGTAATTCTTAAGACTTAAATGATAACGAGCTAGCTCTGATTCTAGGTTTGAATGGGTGGAGGGTGTTGCACGGTATGTGAGAAAAATGAAGTTGAGTAGAGTAGCTCTACAATGGCTATGCAGAAGATTTAATGAAGCTTCAGAAATTAAAGGAAAATCCTTCAAAACTTGGAGATGCAGAGATTTAACTACTCTTATTTATTGCTCTTTGAAGTACAACAAATATGGTAGATTTATGTCTGTTATTACTGTTAAAGGAGAGATGACCTCTTCTTCTCAGACTTTGACGTCACACGCGACACGCGCTGGTGCGTGAGTTGACAAAACTCAGAATCCCTTCTTTTTTTGTGGTTCAATCCAGGCCACAAGGGATTTCACCTCCCACTCCGCTTTCGTTTAAAGCACTTTCTTTTCTTTTCTTCAATTTTCAGGGGGGAAATGGACAACATAATCTTTTTCAAATTAGGGGGTAAGTCTTATGACTTAACTAATACCAAGCTAGCCTCAAATTCTAGGTCTGAATGGGTGGAGAGTGTTGGGCGGTATGTGAGAAAAATGAAGTTGAGTAGAGTAGCTCTACATTTCTTATGCAGAAGATTTAGTGAAGCTTCAGAATTCAAAGGAAAATACTTCAAAACTTGGAGATGCAGAGATTTAACTATTATTTATTGCTCTTTGAAGTATAATAAATATGGTAGATTTATGTCTGTTATTATTGTTAAGGGAGAGCTGACCACTTATTCTCAAACTTCGACGTCACGCGCCGGTGCGTGAGTCGACAAAACTCAGAATTCCTTCTTTTTTGTGGTTCGCTCCAGGCCACAAGGGATTTCACCTCCCACTTCGCTTTCGTTTAAAGTACTTTCTATTCTTTTCTTCAATTTTCAGGGGAGAGATGGATAACAAAATCTATTTCAAATTGAGGGGTAAGTCTTATGACTTAAATGAAACGAGCTAGCTCTGATTCTAGGTTTGAATGGGCGGAGAGTGTTGCGCGGTATGTGAGAAAAATGAAGTTGAGTAGAGTAGCTCTACAGTGGCTATGCAGGAGATTTAATGAAGCTTCATAATTCAAAGGAAAATCCTTCAAAACTTGGAGATGCAGAGATTTAACTACTCTTATTTATTGCTCTTTGAAGTACAATAAATATGGTAGATTTATGTATGTTATTACTGTTAAAGGAGAGATGACCCCTTCTTCTCAGACTTCGACGTCACGCGCGACACGCTTCCGCGCGTGAGTCGACAAAACTCAGAGTTCCTTTTTTTATTGGTTCGATCCAGGCCACAAGGGATTTCACCTCCCAATTCGCTTTCGTTTGAAGCACTTTCGTCTGTTTTCTTCAATTTTTAGGGGAGAGATGGATAACAAAATCTTTTTCAAATTAGGGGTAAGTCTTATGACTTAACTGATAACGAGCTAGCTCAAATTTTAGGTTTGAATGGGCGGAGAGTGTCGCGCAGTATGTGAGAAAAATGAAGTTGAGTAGAGTAGTTCTACAGTGGCTATGCAGACGATTTAATGAAACTTCAGAAATCAAAGGAAAATCCTTCAAAACTTGGAGATGCAGAGATTTAACTACTCTTATTTATTGCTCTTTGAAGTACAATAAATATGGTAGATTTATGTCTTTTATTACTGTTAAAGGAGAGATGACCCCTTCATCTCAGACTTTGACGTCACGCGCGACACGCTTCCGCGCGTGAGTCGACAAAACTCAGAGTTCCCTTTTTTTTGGTTCGATCCAAGCCACAAGGGATGTAACCTCCCACTTCGCTTTCGTTTAAAGTACTTTCTTTTCTTTTCATCAATTTTTAGGGGAGAGATGGATAACAAAATCTTTTTCAAATTAAGGGGTAAGTCTTATGACTTATCTGATAACGAGCTAGCTCTCATTCTAGGTTTGAATGGGCGGAGAGTGTAGCACGGTATGTGAGAAAAATGAAGTTGAGTAGAGTAGCTCTACAGTGGCTATGTAGAAGATTTAATGAAGCTTCTGAAATCAAAGGAAAATCCTTCAAAACTTTGAGATGCAGAGATTTAACTACTCTTGTTTATTGCTCTTTGAAGTACAATAAATAGGCAGATTTATGTCTGTTATTACTGTTAAGAGAGAGCTGACCACTTCTTCAAGACTTCGATGTCACGCGCGACACGCGCCGACGCGTGAGTTGATAAAACTCAGAATTCCTTCTTTTTTGGGGTTCGATCCAGGCCACAAGGGATTTCACCTCCCACTCCGCTTTCGTTTAAAGCACTTTCTTTTCTTTTCTTCAATTTTCAGGGGAGAGATGTATAACAAAATCTTTTTCAAATTAGGGGGTAAGTCTTATGACTTAACTAATACCAAGCTAGCCTCAGATTCTAGGTTTGAATGGGTGGAGAGTGTTGGGCGGTATGTGAGAAAAATGAAGTTGAGTAGAGTAGCTCTACATTTCCTATGCATAAGATTTAATGAAGCTTCATAAATCGAAGGAAAATCCTTCAAAACTTGGAGATGCAAATTAGTGAATAATCACCAAATGTCCTTTATTCAAGGAAGACAAATTATGGATGTCGTGTCAATAGCAAGTGAGTGTGTAGATTCAAGGATTAAAGGAGAGATCCCAATAATTATGAGCAAGCTTGATATAGAAAAGGCATATGATCATGTCAATTGGGAGTTTCTACTTAATATCTTGAGGCAGATGGGATTTGGAGACAAATGACTTAAATGGATAGGTTTTTGCATCAAAACTGTCAGGTTCTTCATACTTGTTAATGGAGAACCTTATGAAGAGTCTGTTGGTCTTTTTCCCTCTGAGAGAGTAGAGAGGATTACAACAGGGACATCCTCTCTCTTCTTTCTTATTTATTTTAGCTATGGAGGGTCTTAACAGTATGATTAGAGTGGCCAATCAAAAGGACTAGATAAAGGGTTTCAACATTGGTAATCAATTAGGGGTCATTTTGCAAATAAGTCACCTTTATATGCAAATGACACACTAATATTTTGTGATGCAAAGGCAGAACAAGTTAGTTACATTAGAGTTGTTTTGGTGATTTCTGAGGCCATCTCTGGATTGGCTGTGAACTGGGGGAGAAGCAGCATCTTCCAAGTCAAGGAAGTGACAAATATTCAGATGTTGGCAAAAATTTTGCAATGCAAGATAGAGCACTTACCAATTACTTACCTGGGAATGCCTTTGGGGAATAATCACAAGGTTTTGTTTATTTGGGATGGAATCATTGAGAAGACAGTGAAGAGGTTGGCTAATTTGAAGGCAAACTATCTGTCTCTGGGAGGAAGAGTCCCTCTGATCAATTCGGTCCTAGATGCGTTGCCTACATATATTATGTCACTTTTCCCTTTACCAACAAAAGGTAGAAGAGAGATTGGATAAGTTGAAGTGTAATTTCCTATGGTCGGGGAACAAAGAAGGCAAAAAATACACTTAGTTAAATGACAGACAACCTTACTGAGCAAGAAGACTGGGGGTCTTCCCATAATAAAATGAAGAGTCTTGAATAAAAGTCTACTTTCTAAATGGCTTTGGAGATTCGTGGTTGAAAATCAGGCATTATGGAGAAGAGCAATTCTCAACAAGTATGGGTAGACCAAGGAGTGGGTGTCTAATGTAGTAGATAGCACGTATGGGGTATCAATTTAGATATCAATCAGAAATTTATGGGATAGTCTAAACTCTAAAGAAGAATTTAGTGGTCAAGGTAGGAGAGGGTAGCAAAATATTTTTTTTGGAAGGACAAGTTAATTGGACAAGAGTGTCTAAACTTAGTCTTCCCCGATCTCTTTTCGTTTTGTACCAACCTTGAGGCTAAAATTGCTGAGATTTGGTCTCCTCAGGAAAAGAACCTCACATTTAGGAGAAATCTAAATGATTGGGAAGTGGATAGAATTGCTGAACTGCTACTCAAATTAGGTGAATTCATGGGCCTTACTACAGAAGCAGATGGTATAAGATGAAAACATGACTCTGATGGCAAATTCTCTTTGCGTCGAGTATATAGGAGAGAGGTCATGACTCACTTCGGGGAATTCATGGTCCATGGAAACAAATATGGAAAGGCAACACCCCAACCAAGGTGAAATGCTTCACCTGGTTGGTCACTAAAAGGGCATGTCTCACTCAGGAAAAACTCAAGAAAAGAGGCTTTCAGATTGTCTCCAGAAGTGTTTTTTGGTCATGAGAAGGAAGAAACTAACAACCACTTATTCCTACACTGTAAGGTTATTGTTTAGGTGTGGCGCATGGTCTACAACATTTCTCAAAAGCCCTAGGTGATGCCAGAATATACTGCTGATCTTTTGAGCTGCTGGATAAGGAGGGGGGAGAGAGACCCAAAAAAGATGGTGGGCTATTTGGAGAGAAAGAAACCTTAGGTTCCATGAGAATATTACTAACAATATGCAGAAAGTTAAAGAAAATTGCATCAACATGTTTTTTTGGTGTAAATAAGAGGTATAGAAGTAGTAGATCAGTTGATAGATTTCCTAGGATCAATGTAATTATAGTTTTAGCTTGCAACTTTTTGGAGGTAGCCAGCATACCCTTAATGCTGAAGAGTACAACTTTAACTTTGTCAAAAAAAAAAACAAGAGGAAGAGGTTGGGGTTGAGCGTAATGGGCTTCAAAGCAACTACTTTAGGTGATATTAATGATGTTAAATGGTTGATGTGGTTGAGAAGCCTCTGAGTAATTTTTCGAGGTGCAATTTACGAGTTGATAGTGATTCTCTCTTTCTATTTTGACATCAGAGGAACATGATCCGTGAGGCAACAACATTTTTGTTGGATGTTCTGACTTCTGAAGCCTAACCTTCCAGAGCATGGTTACCTGCAGACTAAGGTATTTGTTCCCTTCTCATTAAGGGACATCTTTATGCTTATACATTTTTCTTTGGTAAATACTAGCCATGAAATATTTTTGGCCCTTTTCATTGTCATTATGATTACAACAACTATGCCTCAAGAAGTTAACTTGGTAAGAAACTTATTGATGATAATAGAAAGTGACTGAAGCTCTTTAAAATATTAGAAAGTATCAAAACAAACAAGAAACTTCTTGATGATAATGGGAAGTGAACTTTGAATGTTGGGAAGTATTGGGGGCAATTTAGTGAGTGGAGTAAGACGAATGTGGAAAAGAGGAAATCAAGGCAAAGAAGAAACTTGTTGATGATAATAAAAAGTAATTGGAGCTTTTTGGGCCTTGTTGAAGTATCCAGGACAATTTAAGACATTTAGTATTATGAATGTGGCAAAGAAGTGGAATTTCAATTTAGAAATATTAGAGGAGTAAAAAGTGAGACATCTTCCTGCAGCCAATATGCACAAATGTTGAGTAAATGATTGTTGGGATTTATGGAGTTCTGATGATTGATAAAGAATGATGAAATACGTCGTCAACATGGTCTAAAGGTACAATATCATGAGCAATTGAATTCGGACAAACATTTAAAATAAATAAAAACAAGAATGCAAAAATCAAGAAATGGATAATGCCAATTTCATGATAAAACTCAAGGAAACAAAGTAGTGAAGAATTAAAGAGAAAGAATCAATGAGTTTGATTTGAAGAGGGAGTCTAAAGAGAAAAGGAGTTTAATTGAAGAAGTAGTACTCACTTGAAGTAGAATTTTAAGTCAAAAGAGTTTAAGTCAATGTGGAGTTTAAGGTGAAGTATAGTTCTATGAAGAATTGTTCTTTAATAGCGGTGAATTCGTTCAAAATAGTTGTGCACTTATCGATCAAAAAGGACAATTGAAATAATTGACTTCGTAAGTGTTATCAGCAAATTGAAGGAACACATTGAAGAACCTGGTCCTATTAGAGTTGATGCATTGGGAGTTCTTCTTTGTTATTGAGTCTTGATGAGTTCTAAACTGAATTAAGAGTGTTGTCTTCAAGTTGGGATAGCTCGAAGAGTTGGGAACACATACCTTGGAGGTTTGTATTGAAGTTTAGGAATTAAAGTTAGTTTCTAGGATTGTAGGAGTTAATAATCTAAATATACAAGCTTAGGAATTAGAAGTTCCTCGGATTGCAAGACTAGTAATATGAATCCATAATTTGAAATTTAGGAATTAAAGTTAGTTCCTTAGGTTATAGAGTTTGTAATCTTAAACGATTAAGGCTCATTGATTTAGTGAAGTTGGAGTTAAATCCTATAGGGGTACAATTCATGGTTTTTTACACCTTTTGAGTTGGGCATTCTTCACATAAAAATATTGCGTGCTTTTTGTTTACTATTCTTCTTACTTTATTTGAACATGTTAGGAAACTTGTTTTACCGCAATCAAGTCTCAAGGGCCAAGAGCTTATATGGGCCGCGCTTATATGCCTAGTTTTAAATGGGCTTAAAAAATCCTATATCAATCCTATCCCAATAACGAGTTGGGTTGGGCCGGCCCATGGGCTAAGCCTATTTTGACGGCTCTACTCAGTAGCTTTTGATTTTTAACTCTATATTTGTGTCAAAAAAAATCAACATAATATGTACAGCTAATATATCCCGGTTCCAATCATTGACTTGACTTAAAATTCAGAACAAATAAACTTAAAATTTCAATCCAACTTTGACTTAGATATCTTAGGTTTTTTTATGGTGCAATGCCATAGATTCATTTTACTGATGTATTATTTTAGTTCTTATACTTCTCTTCAAAATATAAATTCTTCTGTATGTTATAATTATCTCATATAGCCATTATAATTCTAGGGAAAATGATATATAGGAGTTGACTAATATCATTATGTAAAAGAAAGAGCTTAGGAGTTACTGCTATTTTCCACTAAGCAAGTTAAAGCCCACAGATTTCTGTTAATTAATTGTGTAGAAAAATTTTAGTGTTGACTAAGACTAGCGTTGAAACTAGTTTTCTTCTCAAAATCTTTTGAAATGTGATTCAATATTACATTTTCTACCTATTATACCCTCAATTTATTACTTTGAAAAAAATAAAACTTTTTTGAAATCTTGAGTTTTTATTTCATCTACTTCATAATTAATAGGGGTAAAATGGTAAACTCACTATGTCAATTATTGTTTTATTAATAGATATGTCAATTGAATGGAAAAGTAATTAAGGATAGCGCGAGTATTAGATTGCGAGTGTTTTGACTTGCAAATAAGTCAACACATTAAATGCTTTGACTTTTTTTTTTCCTTTTGCTTTTTTTGTTGATCTATATATTTCGTAGTTCACTGAAGAACAACCCTGCATCTAACTTCCAGTTCTTGTTTAATTTGCATTGTTCCATGGGTCGCACTAAGCTTGTGATGAAGAAAATTGAGGATCCAACATCCCGTCAACAGTTCTATTCAAAGCGCAAGGATACCATCCTTAAGAAGTCCAATGAGTTGGCTGTTTTATGTGATGTGGATGTTGGTCTTCTAATGTTTTCTCCAGCCGGCGAAGTGACTAGCTATTCTAGCAAAGAACGGTGAGTGAAATTTCTACGATGAACATTATATACGTTTCCTTTATAGTACATATTTTCATATGATTTTTTTTTTTGGTTGTTTAGTCTTGAGGATGTCATGCTCCTTGCTATGAACAAGGCTGGTGAACTGAACAAGCTGTATGTTTATTTCAATATGTCAGATACATGAATTAGACTTTGCCAATTCTAGTTTAACTGACCATTGATCTAAGTTTTTTTTTTGTTGTTGTTGAAGATCTCCTGAAAATCCAAATGAACAGGTACTGAGTTTTACGCATTGATCAGCAGTCTCTTCCGATAAGTCCTTGGAATTTCATCTGATCTTTTATTTTGCAGGCTTTGATGGACTCTCTCACACAAT</genome_strand>
        <mrna_strand>TGCGAGTGTCCAAGTCCACAATATGTAAAGTGTCCTCTTCCTTTTATGGAGTTATGGTCTAATAGCCCAAGAGGAAAAAGAACATCAAGAACGAAAAGCTCTATGTGGGATTGAGGATTCTCATCAAATTAAAA...........................................................................................TGGATACTCTCTCCTAATAGAAAAGTTAACGAACAATTAATCATGACGGAACTTCATGGCATTTGCTGCCTAACTTGCATAAGGTTCTTGGATCGGCTTGACCTAAATAGAAGGAACCTCGAGCTACATTGCAAAAGCTTTTATCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTGATGAACAAAATTGAGGATCCAACATGCCGTCTACAGTTCTATTCAAAGCGCAAGGATACCATGCTTAAGAAGTCCAATGAGTTGGCTGTTTTATGTGATGTGGATGTTGGTCTTCTAACGTTTGCTCCAGCCGGCGATACGACTATCTATTCTAGCAAAGAACG....................................................................................TCTTGAGGATGTCATGCTCCTTGCTATGAACAAGGCTGGTGAACTGAACAAGCT.................................................................................................ATCTCCTGAAAATCCAAATGAACAG............................................................................GCTTTGATGGACTCTCTCACACAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E338846" ref_strand="+" ref_description="SGN-E338846 [cTOE-21-I1]">
      <seq>aagtttcttggattggcttgacctaaatagaaggaagctcgagctacattgcaaaagcttttatcagcttgtgatgaagaaaattgaggatccaacatcccgtcaacagttctattcaaagcgcaaggataccatccttaagaagtccaatgagttggctgttttatgtgatgtggatgttggtcttctaatgttttctccagccggcgaagtgactagctattctagcaaagaacgtcttgaggatgtcatgctccttgctatgaacaaggctggtgaactgaacaagctatctcctgaaaatccaaatgaacaggctttgatggactctctcacacaatcaaaacatgaagccgaaatggtggagaagatagcgattgttgaggctcatgaggagaaacttaatggggtcaaagaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="92480" stop="104876"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103449" g_stop="103517" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="65" r_length="65" r_score="0.551"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103518" i_stop="103665" i_length="148">
            <donor d_prob="0.978" d_score="0.58"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103666" g_stop="103837" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="66" r_stop="237" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="103838" i_stop="103921" i_length="84">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103922" g_stop="103975" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="291" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="103976" i_stop="104072" i_length="97">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="104073" g_stop="104097" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="316" r_length="25" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="104098" i_stop="104173" i_length="76">
            <donor d_prob="0.553" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="104174" g_stop="104235" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="378" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="104236" i_stop="104430" i_length="195">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.377" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="104431" g_stop="104437" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="379" r_stop="385" r_length="7" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="104438" i_stop="104541" i_length="104">
            <donor d_prob="0.926" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="104542" g_stop="104576" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="420" r_length="35" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E338846" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>424</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E338846" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103449" e_stop="103517"/>
          <exon e_start="103666" e_stop="103837"/>
          <exon e_start="103922" e_stop="103975"/>
          <exon e_start="104073" e_stop="104097"/>
          <exon e_start="104174" e_stop="104235"/>
          <exon e_start="104431" e_stop="104437"/>
          <exon e_start="104542" e_stop="104576"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGATATGTCAATTGAATGGAAAAGTAATTAAGGATAGCGCGAGTATTAGATTGCGAGTGTTTTGACTTGCAAATAAGTCAACACATTAAATGCTTTGACTTTTTTTTTTCCTTTTGCTTTTTTTGTTGATCTATATATTTCGTAGTTCACTGAAGAACAACCCTGCATCTAACTTCCAGTTCTTGTTTAATTTGCATTGTTCCATGGGTCGCACTAAGCTTGTGATGAAGAAAATTGAGGATCCAACATCCCGTCAACAGTTCTATTCAAAGCGCAAGGATACCATCCTTAAGAAGTCCAATGAGTTGGCTGTTTTATGTGATGTGGATGTTGGTCTTCTAATGTTTTCTCCAGCCGGCGAAGTGACTAGCTATTCTAGCAAAGAACGGTGAGTGAAATTTCTACGATGAACATTATATACGTTTCCTTTATAGTACATATTTTCATATGATTTTTTTTTTTGGTTGTTTAGTCTTGAGGATGTCATGCTCCTTGCTATGAACAAGGCTGGTGAACTGAACAAGCTGTATGTTTATTTCAATATGTCAGATACATGAATTAGACTTTGCCAATTCTAGTTTAACTGACCATTGATCTAAGTTTTTTTTTTGTTGTTGTTGAAGATCTCCTGAAAATCCAAATGAACAGGTACTGAGTTTTACGCATTGATCAGCAGTCTCTTCCGATAAGTCCTTGGAATTTCATCTGATCTTTTATTTTGCAGGCTTTGATGGACTCTCTCACACAATCAAAACATGAAGCCGAAATGGTGGAGAAGATAGCGATGTATACCACTCTCCTCTTGCACTCTGTGTATATATATTAGTCTATTAGTTTGTCAGAGCAGATACATGACTTCTCGAGTTCATTTCTTTTGCTTTTTGCTTTTTTTTTTTTGTATGGTATTTTCTACATGATTGAATAATTTTTTTCTTTTGTTGGGTATTTTTACGATGCTGATGATTGATCAACGTGCTTTAGTGTTGAGGTAAGATTAATATGTAGAAAGGGAATCACCTTCCGCCAATATTTGTTATTACTGAAAACTCGTAAATTGATATAGTTTTTTTTTTTTATGTATTTTCAAAACAGGCTCATGAGGAGAAGCTTAATGGGGTCAAAGAAAG</genome_strand>
        <mrna_strand>AAGTTTCTTGGATTGGCTTGACCTAAATAGAAGGA-AGCTCGAG--CTACATTGCAAAAGCTTTTA-TC....................................................................................................................................................AGCTTGTGATGAAGAAAATTGAGGATCCAACATCCCGTCAACAGTTCTATTCAAAGCGCAAGGATACCATCCTTAAGAAGTCCAATGAGTTGGCTGTTTTATGTGATGTGGATGTTGGTCTTCTAATGTTTTCTCCAGCCGGCGAAGTGACTAGCTATTCTAGCAAAGAACG....................................................................................TCTTGAGGATGTCATGCTCCTTGCTATGAACAAGGCTGGTGAACTGAACAAGCT.................................................................................................ATCTCCTGAAAATCCAAATGAACAG............................................................................GCTTTGATGGACTCTCTCACACAATCAAAACATGAAGCCGAAATGGTGGAGAAGATAGCGAT...................................................................................................................................................................................................TGTTGAG........................................................................................................GCTCATGAGGAGAAACTTAATGGGGTCAAAGAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E337626" ref_strand="+" ref_description="SGN-E337626 [cTOE-11-D10]">
      <seq>ttggattggcttgacctaaatagaaggaagctcgagctacattgcaaaagcttttatcagcttgtgatgaagaaaattgaggatccaacatcccgtcaacagttctattcaaagcgcaaggataccatccttaagaagtccaatgagttggctgttttatgtgatgtggatgttggtcttctaatgttttctccagccggcgaagtgactagctattctagcaaagaacgtcttgaggatgtcatgctccttgctatgaacaaggctggtgaactgaacaagctatctcctgaaaatccaaatgaacaggctttgatggactctctcacacaatcaaaacatgaagccgaaatggtggagaagatagcgattgttgaggctcatgaggagaagcttaatggggtcaaagaaagactaagtgaagcacaacagaaaataaggtattacgaaccacaagtggagagtatcaactctgtccaagaagctgatgcatatgagaagttcattttgagtgctctggaactga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="92487" stop="105091"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103456" g_stop="103517" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="58" r_length="58" r_score="0.565"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103518" i_stop="103665" i_length="148">
            <donor d_prob="0.978" d_score="0.58"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103666" g_stop="103837" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="230" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="103838" i_stop="103921" i_length="84">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103922" g_stop="103975" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="284" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="103976" i_stop="104072" i_length="97">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="104073" g_stop="104097" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="309" r_length="25" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="104098" i_stop="104173" i_length="76">
            <donor d_prob="0.553" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="104174" g_stop="104235" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="310" r_stop="371" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="104236" i_stop="104430" i_length="195">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.377" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="104431" g_stop="104437" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="378" r_length="7" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="104438" i_stop="104541" i_length="104">
            <donor d_prob="0.926" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="104542" g_stop="104603" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="379" r_stop="440" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="104604" i_stop="104705" i_length="102">
            <donor d_prob="0.866" d_score="1.00"/>
            <acceptor a_prob="0.855" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="104706" g_stop="104791" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="441" r_stop="526" r_length="86" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E337626" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>530</cumulative_length_of_scored_exons>
        <coverage percentage="1.008" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E337626" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103456" e_stop="103517"/>
          <exon e_start="103666" e_stop="103837"/>
          <exon e_start="103922" e_stop="103975"/>
          <exon e_start="104073" e_stop="104097"/>
          <exon e_start="104174" e_stop="104235"/>
          <exon e_start="104431" e_stop="104437"/>
          <exon e_start="104542" e_stop="104603"/>
          <exon e_start="104706" e_stop="104791"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCAATTGAATGGAAAAGTAATTAAGGATAGCGCGAGTATTAGATTGCGAGTGTTTTGACTTGCAAATAAGTCAACACATTAAATGCTTTGACTTTTTTTTTTCCTTTTGCTTTTTTTGTTGATCTATATATTTCGTAGTTCACTGAAGAACAACCCTGCATCTAACTTCCAGTTCTTGTTTAATTTGCATTGTTCCATGGGTCGCACTAAGCTTGTGATGAAGAAAATTGAGGATCCAACATCCCGTCAACAGTTCTATTCAAAGCGCAAGGATACCATCCTTAAGAAGTCCAATGAGTTGGCTGTTTTATGTGATGTGGATGTTGGTCTTCTAATGTTTTCTCCAGCCGGCGAAGTGACTAGCTATTCTAGCAAAGAACGGTGAGTGAAATTTCTACGATGAACATTATATACGTTTCCTTTATAGTACATATTTTCATATGATTTTTTTTTTTGGTTGTTTAGTCTTGAGGATGTCATGCTCCTTGCTATGAACAAGGCTGGTGAACTGAACAAGCTGTATGTTTATTTCAATATGTCAGATACATGAATTAGACTTTGCCAATTCTAGTTTAACTGACCATTGATCTAAGTTTTTTTTTTGTTGTTGTTGAAGATCTCCTGAAAATCCAAATGAACAGGTACTGAGTTTTACGCATTGATCAGCAGTCTCTTCCGATAAGTCCTTGGAATTTCATCTGATCTTTTATTTTGCAGGCTTTGATGGACTCTCTCACACAATCAAAACATGAAGCCGAAATGGTGGAGAAGATAGCGATGTATACCACTCTCCTCTTGCACTCTGTGTATATATATTAGTCTATTAGTTTGTCAGAGCAGATACATGACTTCTCGAGTTCATTTCTTTTGCTTTTTGCTTTTTTTTTTTTGTATGGTATTTTCTACATGATTGAATAATTTTTTTCTTTTGTTGGGTATTTTTACGATGCTGATGATTGATCAACGTGCTTTAGTGTTGAGGTAAGATTAATATGTAGAAAGGGAATCACCTTCCGCCAATATTTGTTATTACTGAAAACTCGTAAATTGATATAGTTTTTTTTTTTTATGTATTTTCAAAACAGGCTCATGAGGAGAAGCTTAATGGGGTCAAAGAAAGACTAAGTGAAGCACAACAGAAAATAAGGTTGAAGAGTTGCTGACTCTATATTTCCTTCCTGTCTCTCTTTTTTTGATATTCTAAAAGATTTCCCTCTTTTATAATGATTTTTTCCGTTGGATCGAGTAGGTATTACGAACCACAAGTGGAGAGTATCAACTCTGTCCAAGAAGCTGATGCATATGAGAAGTTCATTTTGAGTGCTCTGGAACTGA</genome_strand>
        <mrna_strand>TTGGATTGGCTTGACCTAAATAGAAGGA-AGCTCGAG--CTACATTGCAAAAGCTTTTA-TC....................................................................................................................................................AGCTTGTGATGAAGAAAATTGAGGATCCAACATCCCGTCAACAGTTCTATTCAAAGCGCAAGGATACCATCCTTAAGAAGTCCAATGAGTTGGCTGTTTTATGTGATGTGGATGTTGGTCTTCTAATGTTTTCTCCAGCCGGCGAAGTGACTAGCTATTCTAGCAAAGAACG....................................................................................TCTTGAGGATGTCATGCTCCTTGCTATGAACAAGGCTGGTGAACTGAACAAGCT.................................................................................................ATCTCCTGAAAATCCAAATGAACAG............................................................................GCTTTGATGGACTCTCTCACACAATCAAAACATGAAGCCGAAATGGTGGAGAAGATAGCGAT...................................................................................................................................................................................................TGTTGAG........................................................................................................GCTCATGAGGAGAAGCTTAATGGGGTCAAAGAAAGACTAAGTGAAGCACAACAGAAAATAAG......................................................................................................GTATTACGAACCACAAGTGGAGAGTATCAACTCTGTCCAAGAAGCTGATGCATATGAGAAGTTCATTTTGAGTGCTCTGGAACTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E375058" ref_strand="+" ref_description="SGN-E375058 [TUS-36-A21](-)">
      <seq>aatcaaaacataaagccgaaatggtggagaagatagcgattgttgaggctcatgaggagaagcttaatggggtcaaagaaagactaagtgaagcacaacagaaaataaggtattacgaaccacaagtggagagtatcaactctgtccaagaagctgatgcatatgagaagttcattttgagtgctctggaactgattcaactatcaaaggcaaaactcttgggtgaccaggaatttctccagagaaatgaaaatgttgcggtgtcttctgtcaacgcagaggctatggctgctgaaggaaccagtgggggatggatgtattgaggaaacaggccggatcacggcggggaagtagctgaggatgtccaacagctatagcaggaataatagttatactagtttataggttaagaacttagtagaataaataacttgcccctatcaggcaagcaaaagtatgaataatgttgcatttgtctattgtgaatgcaactatttgaatatggcatctgaatatggcatcaaaacatagctattgtgttttgaaataaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="103896" stop="105873"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104196" g_stop="104235" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="40" r_length="40" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104236" i_stop="104430" i_length="195">
            <donor d_prob="0.967" d_score="0.98"/>
            <acceptor a_prob="0.377" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104431" g_stop="104437" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="47" r_length="7" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104438" i_stop="104541" i_length="104">
            <donor d_prob="0.926" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104542" g_stop="104603" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="48" r_stop="109" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="104604" i_stop="104705" i_length="102">
            <donor d_prob="0.866" d_score="1.00"/>
            <acceptor a_prob="0.855" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="104706" g_stop="104805" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="110" r_stop="209" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="104806" i_stop="104886" i_length="81">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="104887" g_stop="104937" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="210" r_stop="260" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="104938" i_stop="105016" i_length="79">
            <donor d_prob="0.894" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="105017" g_stop="105053" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="261" r_stop="297" r_length="37" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="105054" i_stop="105313" i_length="260">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="105314" g_stop="105572" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="298" r_stop="556" r_length="259" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="557" polyA_stop="567"/>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E375058" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>556</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E375058" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104196" e_stop="104235"/>
          <exon e_start="104431" e_stop="104437"/>
          <exon e_start="104542" e_stop="104603"/>
          <exon e_start="104706" e_stop="104805"/>
          <exon e_start="104887" e_stop="104937"/>
          <exon e_start="105017" e_stop="105053"/>
          <exon e_start="105314" e_stop="105572"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCAAAACATGAAGCCGAAATGGTGGAGAAGATAGCGATGTATACCACTCTCCTCTTGCACTCTGTGTATATATATTAGTCTATTAGTTTGTCAGAGCAGATACATGACTTCTCGAGTTCATTTCTTTTGCTTTTTGCTTTTTTTTTTTTGTATGGTATTTTCTACATGATTGAATAATTTTTTTCTTTTGTTGGGTATTTTTACGATGCTGATGATTGATCAACGTGCTTTAGTGTTGAGGTAAGATTAATATGTAGAAAGGGAATCACCTTCCGCCAATATTTGTTATTACTGAAAACTCGTAAATTGATATAGTTTTTTTTTTTTATGTATTTTCAAAACAGGCTCATGAGGAGAAGCTTAATGGGGTCAAAGAAAGACTAAGTGAAGCACAACAGAAAATAAGGTTGAAGAGTTGCTGACTCTATATTTCCTTCCTGTCTCTCTTTTTTTGATATTCTAAAAGATTTCCCTCTTTTATAATGATTTTTTCCGTTGGATCGAGTAGGTATTACGAACCACAAGTGGAGAGTATCAACTCTGTCCAAGAAGCTGATGCATATGAGAAGTTCATTTTGAGTGCTCTGGAACTGATTCAACTATCAAAGGTGAGCATATCTCCAGATGCAAATTTTTGTACTTCGATTTCTTAGGACTAGCATGATCATGTTTTGTACTCTTCTTACCAGGCAAAACTCTTGGGTGACCAGGAATTTCTCCAGAGAAATGAAAATGTTGCGGTAAGATTTTGGAAGGATGGTTAACTGTTTTTCGAACATCTATTATGGAAAGTTAACTGTTTGCATTATAATTTTTTAGGTGTCTTCTGTCAACGCAGAGGCTATGGCTGCTGAAGGTAACGAATCTTCATATTCAAATACTTAGTGGTAACTCTTTTGAGTGTATATGTAGTGTAAATTTGGGCCATTTTTGGTAAACTAGATGGCTGAATGGTATATATGTTAGTAAATATATACAATAACTTTTACCCCTCAGTCTCAAACAAATTGATGTCGGAATTGGTACTTCTTCATTTAAAACTCATTTCATACCATCATCTATAGCCACTTTTTTCCAAAGAGGAATCTATTGAATCTTGCTTCTCTGGATTTGTAGGAACCAGTGGGGGATGGATGTATTGAGGAAACAGGCCGGATCACGGCGGGGAAGTAGCTGAGGATGTCCAACAGCTATAGCAGGAATAATAGTTATACTAGTTTATAGGTTAAGAACTTAGTAGAATAAATAACTTGCCCCTATCAGGCAAGCAAAAGTATGAATAATGTTGCATTTGTCTATTGTGAATGCAACTATTTGAATATGGCATCTGAATATGGCATCAAAACATAGCTATTGTGTTTTGAAATAGAAAACA</genome_strand>
        <mrna_strand>AATCAAAACATAAAGCCGAAATGGTGGAGAAGATAGCGAT...................................................................................................................................................................................................TGTTGAG........................................................................................................GCTCATGAGGAGAAGCTTAATGGGGTCAAAGAAAGACTAAGTGAAGCACAACAGAAAATAAG......................................................................................................GTATTACGAACCACAAGTGGAGAGTATCAACTCTGTCCAAGAAGCTGATGCATATGAGAAGTTCATTTTGAGTGCTCTGGAACTGATTCAACTATCAAAG.................................................................................GCAAAACTCTTGGGTGACCAGGAATTTCTCCAGAGAAATGAAAATGTTGCG...............................................................................GTGTCTTCTGTCAACGCAGAGGCTATGGCTGCTGAAG....................................................................................................................................................................................................................................................................GAACCAGTGGGGGATGGATGTATTGAGGAAACAGGCCGGATCACGGCGGGGAAGTAGCTGAGGATGTCCAACAGCTATAGCAGGAATAATAGTTATACTAGTTTATAGGTTAAGAACTTAGTAGAATAAATAACTTGCCCCTATCAGGCAAGCAAAAGTATGAATAATGTTGCATTTGTCTATTGTGAATGCAACTATTTGAATATGGCATCTGAATATGGCATCAAAACATAGCTATTGTGTTTTGAAATAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E746741" ref_strand="+" ref_description="SGN-E746741 [GI|24954844]">
      <seq>cacgaggcagcacgtaaattaagagagaaccaaagcactaccagtgtacagacagaagatcttgtagaagatcctgctcaggagtcggcagattatcatcgtaaccttggtcttcagatggtttctggtttaagcaacgagcttgagaatgtaagaaaagcttcacttattgacggcgagaacttaagtgcagctgtcatgaagcttaatcactcactcatgaaaactaaagagtttctggacactgatatgagaagtttggaggatgaaagtaagttccgtgatacactcacaaattttatccaacatgcggaacaggacattacttgcatactagaagaagagaaaaagataatgtctttggttaagagcacaggagattacttccatggaaattcagggaaggatgaaggcttgcgtctcttttcagtcgttagtgatttcttgattatgttggacaaggcatgtacagtggtgagaaactcaacgaagttaccagttaagattcctaaaaaagggacattaacatctccttcccaagaatcctgtcctgagtctttgcaagacatacgtaaacaactatttcctgcaatccaggagcgacagatgcactattctagttcagacgacgagagctcaagcccgtagctgtctatttaggtgtcagagtactttggagctaatatggcttggataatagtccacagaagtatgtatttaacgactatatgaggcctaaggtgtgcctcctacacccagttagcaaacacatgctctacgagatagagtgaatagacattttgcttcaatgatctcttcgagtcctagcactagcggtaggaagaatggctatagtatagatgccatagtagttattgcatggtctactacaacgatccacagagttaaaccacagcctctcactgtctgtagtcacctttatctataacaatccaaatatcgagatggtaatggtactgaaatctcctaaatatttgttaaattatatttagtatgtattggaagttagaccagattcgtatagtttcagcttctttttctcgtcaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="114399" stop="116150"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="114698" g_stop="115356" g_length="659"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="660" r_length="660" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="115357" i_stop="115440" i_length="84">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="115441" g_stop="115849" g_length="409"/>
          <reference_exon_boundary r_type="cDNA" r_start="661" r_stop="1069" r_length="409" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1070" polyA_stop="1085"/>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E746741" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>1068</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E746741" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="114698" e_stop="115356"/>
          <exon e_start="115441" e_stop="115849"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAGAG-CAGCACGTAAATTAAGAGAGAACCAAAGCACTACCAGTGTACAGACAGAAGATCTTGTAGAAGATCCTGCTCAGGAGTCGGCAGATTATCATCGTAACCTTGGTCTTCAGATGGTTTCTGGTTTAAGCAACGAGCTTGAGAATGTAAGAAAAGCTTCACTTATTGACGGCGAGAACTTAAGTGCAGCTGTCATGAAGCTTAATCACTCACTCATGAAAACTAAAGAGTTTCTGGACACTGATATGAGAAGTTTGGAGGATGAAAGTAAGTTCCGTGATACACTCACAAATTTTATCCAACATGCGGAACAGGACATTACTTGCATACTAGAAGAAGAGAAAAAGATAATGTCTTTGGTTAAGAGCACAGGAGATTACTTCCATGGAAATTCAGGGAAGGATGAAGGCTTGCGTCTCTTTTCAGTCGTTAGTGATTTCTTGATTATGTTGGACAAGGCATGTACAGTGGTGAGAAACTCAACGAAGTTACCAGTTAAGATTCCTAAAAAAGGGACATTAACATCTCCTTCCCAAGAATCCTGTCCTGAGTCTTTGCAAGACATACGTAAACAACTATTTCCTGCAATCCAGGAGCGACAGATGCACTATTCTAGTTCAGACGACGAGAGCTCAAGCCCGTAGCTGTCTATTTAGGTATGTCTATTTGTAAAACTGATTTCCCATGAAAGTAATGTAAAGAGGGCTGATGAATCATAACTTTGCTGTTTTGATGTGTAGGTGTCAGAGTACTTTGGAGCTAATATGGCTTGGATAATAGTCCACAGAAGTATGTATTTAACGACTATATGAGGCCTAAGGTGTGCCTCCTACACCCAGTTAGCAAACACATGCTCTACGAGATAGAGTGAATAGACATTTTGCTTCAATGATCTCTTCGAGTCCTAGCACTAGCGGTAGGAAGAATGGCTATAGTATAGATGCCATAGTAGTTATTGCATGGTCTACTACAACGATCCACAGAGTTAAACCACAGCCTCTCACTGTCTGTAGTCACCTTTATCTATAACAATCCAAATATCGAGATGGTAATGGTACTGAAATCTCCTAAATATTTGTTAAATTATATTTAGTATGTATTGGAAGTTAGACCAGATTCGTATAGTTTCAGCTTCTTTTTCTCGTCAAG</genome_strand>
        <mrna_strand>CACGAGGCAGCACGTAAATTAAGAGAGAACCAAAGCACTACCAGTGTACAGACAGAAGATCTTGTAGAAGATCCTGCTCAGGAGTCGGCAGATTATCATCGTAACCTTGGTCTTCAGATGGTTTCTGGTTTAAGCAACGAGCTTGAGAATGTAAGAAAAGCTTCACTTATTGACGGCGAGAACTTAAGTGCAGCTGTCATGAAGCTTAATCACTCACTCATGAAAACTAAAGAGTTTCTGGACACTGATATGAGAAGTTTGGAGGATGAAAGTAAGTTCCGTGATACACTCACAAATTTTATCCAACATGCGGAACAGGACATTACTTGCATACTAGAAGAAGAGAAAAAGATAATGTCTTTGGTTAAGAGCACAGGAGATTACTTCCATGGAAATTCAGGGAAGGATGAAGGCTTGCGTCTCTTTTCAGTCGTTAGTGATTTCTTGATTATGTTGGACAAGGCATGTACAGTGGTGAGAAACTCAACGAAGTTACCAGTTAAGATTCCTAAAAAAGGGACATTAACATCTCCTTCCCAAGAATCCTGTCCTGAGTCTTTGCAAGACATACGTAAACAACTATTTCCTGCAATCCAGGAGCGACAGATGCACTATTCTAGTTCAGACGACGAGAGCTCAAGCCCGTAGCTGTCTATTTAG....................................................................................GTGTCAGAGTACTTTGGAGCTAATATGGCTTGGATAATAGTCCACAGAAGTATGTATTTAACGACTATATGAGGCCTAAGGTGTGCCTCCTACACCCAGTTAGCAAACACATGCTCTACGAGATAGAGTGAATAGACATTTTGCTTCAATGATCTCTTCGAGTCCTAGCACTAGCGGTAGGAAGAATGGCTATAGTATAGATGCCATAGTAGTTATTGCATGGTCTACTACAACGATCCACAGAGTTAAACCACAGCCTCTCACTGTCTGTAGTCACCTTTATCTATAACAATCCAAATATCGAGATGGTAATGGTACTGAAATCTCCTAAATATTTGTTAAATTATATTTAGTATGTATTGGAAGTTAGACCAGATTCGTATAGTTTCAGCTTCTTTTTCTCGTCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E313426" ref_strand="+" ref_description="SGN-E313426 [cTOA-13-I2]">
      <seq>gaacactcgaatcgactgcgaagtctaatgcaaaaggcgaagacaaggaataacgcgattccacttcaaattcggatgctgacccatcttcactttcagtatcagaagaagattagggtatgtgtagagttattaactgatttttgagtgataaatctctttttgaccgaatgattaattttgaatccttcaccatttttttccaaattcacatctaattaagaacgagaaatcacacgaaaaaaagaatttccaattaaaataactaataagatgtgattgttccgtccttcgaccagtagtgactcataaatttcactcggaatacatgtctaaatggggaaagtgattatccaactgtagaagggcgcggcaatcgattaatacattcgctttttgtataaattgagaaaaaccctacacaaagctttcatctttttgtctctgcttcagcactcaccatagacatagctgttggccgaatagctctcttttcttgctttcagaaacaatggcccccaaaaccaaatcccgcttagtagaccagcctccttctgcatcgtcctctgaagaacaagaattggtggaggaatcccaggaagaagaagaagaacaatcga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="124706" stop="125925"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125006" g_stop="125625" g_length="620"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="620" r_length="620" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E313426" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>620</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E313426" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125006" e_stop="125625"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACACTCGAATCGACTGCGAAGTCTAATGCAAAAGGCGAAGACAAGGAATAACGCGATTCCACTTCAAATTCGGATGCTGACCCATCTTCACTTTCAGTATCAGAAGAAGATTAGGGTATGTGTAGAGTTATTAACTGATTTTTGAGTGATAAATCTCTTTTTGACCGAATGATTAATTTTGAATCCTTCACCATTTTTTTCCAAATTCACATCTAATTAAGAACGAGAAATCACACGAAAAAAAGAATTTCCAATTAAAATAACTAATAAGATGTGATTGTTCCGTCCTTCGACCAGTAGTGACTCATAAATTTCACTCGGAATACATGTCTAAATGGGGAAAGTGATTATCCAACTGTAGAAGGGCGCGGCAATCGATTAATACATTCGCTTTTTGTATAAATTGAGAAAAACCCTACACAAAGCTTTCATCTTTTTGTCTCTGCTTCAGCACTCACCATAGACATAGCTGTTGGCCGAATAGCTCTCTTTTCTTGCTTTCAGAAACAATGGCCCCCAAAACCAAATCCCGCTTAGTAGACCAGCCTCCTTCTGCATCGTCCTCTGAAGAACAAGAATTGGTGGAGGAATCCCAGGAAGAAGAAGAAGAACAATCGA</genome_strand>
        <mrna_strand>GAACACTCGAATCGACTGCGAAGTCTAATGCAAAAGGCGAAGACAAGGAATAACGCGATTCCACTTCAAATTCGGATGCTGACCCATCTTCACTTTCAGTATCAGAAGAAGATTAGGGTATGTGTAGAGTTATTAACTGATTTTTGAGTGATAAATCTCTTTTTGACCGAATGATTAATTTTGAATCCTTCACCATTTTTTTCCAAATTCACATCTAATTAAGAACGAGAAATCACACGAAAAAAAGAATTTCCAATTAAAATAACTAATAAGATGTGATTGTTCCGTCCTTCGACCAGTAGTGACTCATAAATTTCACTCGGAATACATGTCTAAATGGGGAAAGTGATTATCCAACTGTAGAAGGGCGCGGCAATCGATTAATACATTCGCTTTTTGTATAAATTGAGAAAAACCCTACACAAAGCTTTCATCTTTTTGTCTCTGCTTCAGCACTCACCATAGACATAGCTGTTGGCCGAATAGCTCTCTTTTCTTGCTTTCAGAAACAATGGCCCCCAAAACCAAATCCCGCTTAGTAGACCAGCCTCCTTCTGCATCGTCCTCTGAAGAACAAGAATTGGTGGAGGAATCCCAGGAAGAAGAAGAAGAACAATCGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E305391" ref_strand="+" ref_description="SGN-E305391 [cLEX-15-I1]">
      <seq>gttattcataaatttcacttggaatacacgtctaaatggggaaagtgattatccaatcgtagaagggcgcggcaatcgattaatacattggctttttgtataaattgacaaaaaccctacacaaagctttcatctttttgactctgcttcaacactcacccatacacacagttgacggccgaatagctctctcttcttgctttcacaaacaatggcccccaaaaccaaatcccgcttagtagaccagcctccttctgcatcatcctctgaagaacaagaattggtggaggaatcccacgaagaagaagaacaacaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="125007" stop="125921"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125307" g_stop="125621" g_length="315"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="316" r_length="316" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E305391" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>315</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E305391" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125307" e_stop="125621"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGACTCATAAATTTCACTCGGAATACATGTCTAAATGGGGAAAGTGATTATCCAACTGTAGAAGGGCGCGGCAATCGATTAATACATTCGCTTTTTGTATAAATTGAGAAAAACCCTACACAAAGCTTTCATCTTTTTGTCTCTGCTTCAGCACTCA-CCATAGACATAGCTGTTGGCCGAATAGCTCTCTTTTCTTGCTTTCAGAAACAATGGCCCCCAAAACCAAATCCCGCTTAGTAGACCAGCCTCCTTCTGCATCGTCCTCTGAAGAACAAGAATTGGTGGAGGAATCCCAGGAAGAAGAAGAAGAACAA</genome_strand>
        <mrna_strand>GTTATTCATAAATTTCACTTGGAATACACGTCTAAATGGGGAAAGTGATTATCCAATCGTAGAAGGGCGCGGCAATCGATTAATACATTGGCTTTTTGTATAAATTGACAAAAACCCTACACAAAGCTTTCATCTTTTTGACTCTGCTTCAACACTCACCCATACACACAGTTGACGGCCGAATAGCTCTCTCTTCTTGCTTTCACAAACAATGGCCCCCAAAACCAAATCCCGCTTAGTAGACCAGCCTCCTTCTGCATCATCCTCTGAAGAACAAGAATTGGTGGAGGAATCCCACGAAGAAGAAGAACAACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E703771" ref_strand="+" ref_description="SGN-E703771 [FA22BF12]">
      <seq>tcagcactcaccatagacatagctgttggccgaatagctctcttttcttgctttcagaaacaatggcccccaaaaccaaatcccgcttagtagaccagcctccttctgcatcgtcctctgaagaacaagaattggtggaggaatcccaggaagaagaagaagaacaatcgagggaggaagaaggagaagaagaatcaggggaagaaactgaagaacccaagacagcacatcctgttgtaaagagatccagcactcagaaactccaattttcttctgattccggcagcgagagtgggtcaggatccgaatccggacattccctgccttccccttctgcattggacttcaccatcaagcccagtgttcctgctaaagctgccaccccatcgaagccagcagcaaagaggccgcaagatacccagacagagaaagggaggaagaagcccaagattgcagaagaagaggagaaaaaatcagctgctactcctcgcaatctatggagcgatgacgaccagcttgctctactcaaaggtattgctgaatacaaggcggtaaaaggtgtggaacctattgccgatatgtctgcttttcatgaattcatcagggggaagttgcaggttgaagcttcaaataagagactccgagacaaggtaaggaggttaaagacgaaatatttgactaatgtgaaagatagtgaggagccagttttcatgaagggtcaggattatctagtttttgagcattcaaagaggatttggggtgcccctggaactagtaatggagttagcactaatggcacagctaaaattactgttgaggttaacaagagctctgaacctaagagaagtgctaaagtcagcaaacccaaggatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="125155" stop="126630"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125455" g_stop="126330" g_length="876"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="876" r_length="876" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E703771" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>876</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E703771" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125455" e_stop="126330"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGCACTCACCATAGACATAGCTGTTGGCCGAATAGCTCTCTTTTCTTGCTTTCAGAAACAATGGCCCCCAAAACCAAATCCCGCTTAGTAGACCAGCCTCCTTCTGCATCGTCCTCTGAAGAACAAGAATTGGTGGAGGAATCCCAGGAAGAAGAAGAAGAACAATCGAGGGAGGAAGAAGGAGAAGAAGAATCAGGGGAAGAAACTGAAGAACCCAAGACAGCACATCCTGTTGTAAAGAGATCCAGCACTCAGAAACTCCAATTTTCTTCTGATTCCGGCAGCGAGAGTGGGTCAGGATCCGAATCCGGACATTCCCTGCCTTCCCCTTCTGCATTGGACTTCACCATCAAGCCCAGTGTTCCTGCTAAAGCTGCCACCCCATCGAAGCCAGCAGCAAAGAGGCCGCAAGATACCCAGACAGAGAAAGGGAGGAAGAAGCCCAAGATTGCAGAAGAAGAGGAGAAAAAATCAGCTGCTACTCCTCGCAATCTATGGAGCGATGACGACCAGCTTGCTCTACTCAAAGGTATTGCTGAATACAAGGCGGTAAAAGGTGTGGAACCTATTGCCGATATGTCTGCTTTTCATGAATTCATCAGGGGGAAGTTGCAGGTTGAAGCTTCAAATAAGAGACTCCGAGACAAGGTAAGGAGGTTAAAGACGAAATATTTGACTAATGTGAAAGATAGTGAGGAGCCAGTTTTCATGAAGGGTCAGGATTATCTAGTTTTTGAGCATTCAAAGAGGATTTGGGGTGCCCCTGGAACTAGTAATGGAGTTAGCACTAATGGCACAGCTAAAATTACTGTTGAGGTTAACAAGAGCTCTGAACCTAAGAGAAGTGCTAAAGTCAGCAAACCCAAGGATGATG</genome_strand>
        <mrna_strand>TCAGCACTCACCATAGACATAGCTGTTGGCCGAATAGCTCTCTTTTCTTGCTTTCAGAAACAATGGCCCCCAAAACCAAATCCCGCTTAGTAGACCAGCCTCCTTCTGCATCGTCCTCTGAAGAACAAGAATTGGTGGAGGAATCCCAGGAAGAAGAAGAAGAACAATCGAGGGAGGAAGAAGGAGAAGAAGAATCAGGGGAAGAAACTGAAGAACCCAAGACAGCACATCCTGTTGTAAAGAGATCCAGCACTCAGAAACTCCAATTTTCTTCTGATTCCGGCAGCGAGAGTGGGTCAGGATCCGAATCCGGACATTCCCTGCCTTCCCCTTCTGCATTGGACTTCACCATCAAGCCCAGTGTTCCTGCTAAAGCTGCCACCCCATCGAAGCCAGCAGCAAAGAGGCCGCAAGATACCCAGACAGAGAAAGGGAGGAAGAAGCCCAAGATTGCAGAAGAAGAGGAGAAAAAATCAGCTGCTACTCCTCGCAATCTATGGAGCGATGACGACCAGCTTGCTCTACTCAAAGGTATTGCTGAATACAAGGCGGTAAAAGGTGTGGAACCTATTGCCGATATGTCTGCTTTTCATGAATTCATCAGGGGGAAGTTGCAGGTTGAAGCTTCAAATAAGAGACTCCGAGACAAGGTAAGGAGGTTAAAGACGAAATATTTGACTAATGTGAAAGATAGTGAGGAGCCAGTTTTCATGAAGGGTCAGGATTATCTAGTTTTTGAGCATTCAAAGAGGATTTGGGGTGCCCCTGGAACTAGTAATGGAGTTAGCACTAATGGCACAGCTAAAATTACTGTTGAGGTTAACAAGAGCTCTGAACCTAAGAGAAGTGCTAAAGTCAGCAAACCCAAGGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E445419" ref_strand="-" ref_description="SGN-E445419 [cSTA-45-B3]">
      <seq>cccgattccgcttccgaatcggatcctgacccattttcgcttccagactcagaagaaaattggggcttctgtggtgtctgaactagtttttgagaaatgggtttcttcacaactgaatgggctgtcttgggttcttcatcttcttcagtttcttcccctgattcttcttctccttcttcctccctcgattgttgttcttcttcttcctgggattcctccaccagttcttgttcttcagaggacgatgcagaaggaggctggtctactaagcgggatttggttttgggggccattgtttctgcaaacaagaagagagagctattcggccgtcagctgtgtctatggtgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="137012" stop="125161"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="136709" g_stop="136606" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="15" r_stop="118" r_length="104" r_score="0.798"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="136605" i_stop="129681" i_length="6925">
            <donor d_prob="0.983" d_score="0.72"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="129680" g_stop="129663" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="119" r_stop="135" r_length="17" r_score="0.444"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="129662" i_stop="126643" i_length="3020">
            <donor d_prob="0.986" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126642" g_stop="126638" g_length="5"/>
          <reference_exon_boundary r_type="cDNA" r_start="136" r_stop="140" r_length="5" r_score="0.800"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="126637" i_stop="125670" i_length="968">
            <donor d_prob="0.538" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="125669" g_stop="125461" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="141" r_stop="349" r_length="209" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E445419" ref_strand="-">
        <total_alignment_score>0.907</total_alignment_score>
        <cumulative_length_of_scored_exons>336</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E445419" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="136709" e_stop="136606"/>
          <exon e_start="129680" e_stop="129663"/>
          <exon e_start="126642" e_stop="126638"/>
          <exon e_start="125669" e_stop="125461"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGATTCGGAACCTGACCCATTCTCGCTGTCGGACTCAGAAGAAAATTGGAGCTTCTGAGCGGTTTTGACTGGTTTCTGAGTGATGGATCTCTTCACAACTGGAGGTTCTTCTTCTTCTTCAGTTTCTTCCCTCGATTGTTGTTGTTGTTCTTCTTCTTCCTGGCATTCCTCCACCAATTCTTGTTCTTCAGAAGATGATGCAGAAGGAGGTTGGTCTACTAAGCGGGATTTGGTTTTGGGGGCCATTGTTTCTGAAAGCAAGAAGAGAGAGCTATTCGGCCGTCGTCGGTGTCTATGGTGAGTGATGAAGCAAAGACAAAAAGATGAAAGGCCTTTGTGCAAGGGTTTGTACAAAAGGCCAATTTCTTATACGAATTGTATTATAATGCCGAGTATATGTTATTTGTAGGGAAAAAAAGGCATAATCATTTATATTATTATTTTATTTTTTATTTTTTATTTTATATATCATATATATTATATATATATATATATATTATTATAAGTGGAAAGTTTCAAAGTAAAAAATTGAATAACCATTTTGTCATTTTACTAAATTAAAATTAGATCATTTAATTAAATACAAATATTTTAATTGCATAATGACAAAATTTAAATCCTTTAGTTCTTTAATAATTAAATTATTATTTTTTTGATAAATGAGTACATTGATATTATTTTTAATCTTAATCATAATTCTCAGAGGAATTTGAAAAGTTATGATAGATAAAAACAATGTATACATCATCATATCATATCATTCATATATTATGTTATTATTGTTTTATTTTTTATTTATCATATATCACAATATATCCTATTATATAATTGTTATTATATTTTATATTATAAGTGGGAAGATGCTTAGTCTAAAATTGGATTAAGAAAAAAATCTTTTAACTTTTTAAATCTCATTATCATATTATTCTTATAAATAATGATTAGTTATTACTCTATAAGTGTGAAACTAGAAATCACTATTAAAGTTGAATGAGTTTTTAACTCTTCAAGAAATTATTATTAATAAGTTTCTTACACGTTGTCTTCTAATGACAATATTGTACATTTGAATTTGATTTAGAGAACATAAATCTCTTATCATACTTTGTATTTTCAAGTCTTTCTTTACATTGAGATTTTTCAGTTTTTGCTATCATTCAAATTATATTCTAAATTGATATTTAAGTGTTTGATCTCTCACATGAAAATATACTGTTAAATTTTGTTTTATGAACTTATGATGTAATTTATTCTTAGGTAAGATGATTCTTTTGCAGACATTGATTAGAACTTTTAGTAGAAATTGTGCCGATACAAATGAGGTATGTAACATGCCTCTCCAACAAATTTACATTTTTTTGCATGATTACTTTTTAATAAATTTGACATACATACGACTATTGTATTTTTAATTAGATTTTAATAACTTAATGCATGTGTATTTCACAAAGTAGAGCCTCCTTGATAACTTTAGTTTGATAATGACTTATTGAAATTTATTTTTCTTCAATCTCCTAGCTTCCGAGGTAAAAAGGATAACTAATGTTTTTCCCTCAACAACATAGAGCAAAAGAAATTGAGAAAATCTCTGAAGAAGACATATTCTAACAAATGAGGTAATTTAATTTAATATGAAGGAATACTTAAAAGTCAAATATGAATAATAAAGTTAGAGAAAAAAATGGATAAAAAATTAAAATACAGTAAGTAGGAAAAATAACCATGAACAAGCTATTGAAATTTTTTGTTCATACTACAAAGAACAATAAACTTACTATGTCATTTGAATGTAATATGGAGACAACAAATATACTTGTTACAAGTACATATGATAATACAAACTTTGGTACAAATTGAGAAGGTGTGTTCTGTATATATTGTCACTTTCTTAGAAAAGTAACAAACTAATATATTGTAGGTTTCGACCTAATAATATAATAAGGTAAATTATTTATCACATTTATTGTCCAAATTTGACAGGTTATCAGAATATCTAATTATTTGACATTTACATTTTACAATAAAGAAGTCATTTATATAGGTTGTCTATTTATTTCATTTAAATTTTTTCGTTAAATCATTTTTGAAATTCTTCAAAATGTGATTTTAATATTTTTAGTTAAAATTTCATTTTTGTTTGATGTGATTTTAATATAACTCTTACTATATATAATATTTTTGTGGAACTCATGTGCAAAGCACGTGTCCATGACTAGTAATTATTATAAGTGAGAAGCTTTTACTCCTATACTAAATACTTTTTAAAAAAAATCAAATATTATGAAATGCTAAAAGTCTACTTTCCTTTTTAATGAAATAGTAAAATATCTAAAAAATTTGAAAAGTCAGTCAATATATTAAATATAAATATTATTGGATGCTAGAAATTTACTTTTTTTTTTAATGAAATAGTAATGCCTGAGGACTTTGAGAAGTCGATTTTTCATTAAAACATAATAATAATAATATTATTATTATTATTATTATTATTATTATTATTAAAAATGAGAAGAAATTTAGAAAAAAGTTAAATTGTTGTTTTTCCACTACATTAGATTAAAATGTTACATAATATCAAACTTATTAAATATTCTATCAATAATTAAGAATATCATATTAAGTGTTTACAATAATATAAATAATATGTATTTAAGTATTATAAAACGGATAGATTAATGTAATATTTCAGAAATGTACTTGTCTAGTGAAGAGTCTATTAAGTTTTAAGAATATGTATTGGGGTACATAGACATCTCAATGCCCAATATTGAGTACTATTGCGCATGTTAGAGAATATTGGCTTAAGGGTGTTAGCCAATTTCTCTGTATTAACAAGTAACTTAAGATATACTTTGATGTTCAAATACTTCAATCCAAGTTTGTTTAGAAATTCTACCTACAATGAAGACCCTAAACTAAAATTTTTGATTTCACACATTAGGTACGAGACATCCAAGTGTCAAGCCTAGGTGCCATAACACATGATCATTTAAAATATGATCATGTAGATTAAGAAGTGCCCAAGGACATAGTGAGGATCCTTGGGACAAGAAGTGAACTTTCCAAGTGCAACTACAGAGTGCACGGTAACACATGTGCTTGAGAGACCAAGCGACCAAGCCCAACCGATTCGGTTAGGGCGGTTAAGGGGTCGGCACGCGTCAGGTCAAGCCACGTGGGGCCGAACTTCCTAACCAATCCTAGGCTCTAACTAACTTACCTAATTAGCTAACTAACCTAGGATTAACTAAAATGAACTAACTAGTGTGCCCGAAATCCTAAGACCTAACTGGATAACACTAGCCGAGTAACTAACTAAAGAAACATCCTAGTATCTAACCTAGGATGGTCCAAAGGGGTTGGTTATGGTCCTAGTGACTTAGGGGTACTTTAGTAATTATCTTAGGTCACTTAATGAATTAAATTAGCAGCTTAATTAATTAATTTAAATTCATGGTCAAACACGATAGCAAATTTTCAGAATTTGGCTAAGTCAGATGCTCTCCTATTTTTAGTCAATTTAGGAGGGGCATTTTGCTAATTAGCTAATTGATTTATTTAATTAAGTTATTTAGCTTAAGTTGAATTAGTCAATATTCAGTTCCTAAGACTTACGCTCACGTTTATCCAGTAGAAACCCACGACTGAAAAACAATGAATAAACGTGAGAAGAACGGAAAAATACTCTCAATTCTCCTTAGGCTATTTCAAAGCAATTCTTCAAGATTCTCGTGCAAAGTACAGAGTGATTTTCGTAGATTCAATTCTACAGTAAGGTATGAGTTTTCTCTCTTGGATTCCTTTCCCAGGGAGGCTTTTCAAACGTTTTGAAATCAAGAAAATCGAAACTAGGGTTGTTCCTAATGAAATAGTTGAATGTTCATCTCCCTAGTTCTCCCTATTTCCGATTCTAGTAGTATGTATAATGCAAATCTCGAGCATGTTGTTGGTATTTTTGGTTGCACCTATTTTGTTCATAACATTACCCCGAAAAAGATAGGCTTCAACGCAAGGCATTCAAATGTGCCCTTCAAGGGTATTCTCGTCTACAAAAAGGTTACAAATGCTTTGATCCCTCTACCAATAAGTACTTGACCTCGCAAATGCTATTTTCTTTCAAGATTTTTCTGTATTTTTCTCCTAATACAAAAAATAAGAAGGGCATAAAGAGCTTCCCATTCAAATATTTCAACCCACCTCCACCTCCGACTCTTAAGGTCTATTCCCAACGACCTCAACCTCCATATGAACTCGCTAATCCAGTTGATATTTCCAACTCTTTATTATTTAATATATTCTCAACACATCCCCTCACATGCGTGTGAGCGGGCCTAATCTTTTCACTGGTCAAGCACGTGAAAATTCTTTTTGATTTTTGGGTGGTGGTGAGATTCAATTTCAGCACATCTGTCTATTCTGATACCATACTAAAGTGTGTAACCATCGTATCTAAAAACTTGCGATTAGAGAAAAAACACCTTTTTTCGTATTATTATATTCTAAAACATAAACAATTTAGATATCTATTCAAAGTCTACCAGGAGAAAGGTACGACAGAGAGAGCCAAATAATGAGGGATGAAACGAATAGAAGCCTAACGGTTCCATGCGATTAAAACATAGTTCAGGATAGAATGATCGTGTAACAGGCTATTTATACGGCAGTAAATTGCATTTCTAAGATACTCAAACATGTTTATAAGACAAAAGTTGTCAAAGAACTGATATCAAAACAGATTTCTGAGCTTATAAAACCGGACACCCTTTTAGATGCAAGAAAACAGGAAGATATCAGTACTTATTACATCTAACAGAGTGCAGATAGCACATTTAGGAGATAAAGTTAGATGGCTTCCCCGTGTGTTAAAACCTCCAAAATGCACTGGTTTATAGGTTTGATAACATGATAACTAAGTGTCACGGAGAAAAAGTTTTCAATCCCTAAAGTCGTTTGAAATCCATGTAGACTTGATTAAAAACAGAAGACAATCAAACCAAGAGATCTACATGAGTTATGCCAAACAATTGAGATTAAACTAGTCAGTAAATACCATAGAGAGGTGTGGGAGATATAGGAAACCCCTAATTTGAATGCAATGGACCTGAACAAAACAAATGGATATTAGGAATTCATATGATAACTGACCTCTCGATGGTTTCTGAATTGAAACATAGTTGATTGAATGACGATAAATCCAAGTGTGTAGACACACACACACATATTAAAGGTGTATCTGTGTGCATTCATGCGCTGCAGAATATCTTCTCTGGGAAAGAGTAGAAATCAGCAGTTAAAGGAAACACCTAAGAAGCATTGCCTGTAAGAAATTTTTCCATCATAATTTAAGTTCTTTTAGATTTATAGCAGGACATAAAACCTATAGGATTGGACATCTGTCTAACACACCACTCCCACCCCAAATCAATTAACTGGTATGATAAGCTGGCATGAACAACAACTGAGAACAATGTGAATCAACACAAGCGGCAAAAACTGAGAAAGATCGCATTTAAATATATTTCCATCTGGAATAGGAAATGACATATTAAAAGGATGAACCAGAAGCAAACACAGCGGATATCATCCAAACCAGTTCATAGAAAAACTAAAAAGAAGCAATAAAATGTTTGAATCAACCCGATAAACTAAAGCTTCCTCACAGACTAAACACAAGTACATCAACGCGAGAAGAAATTGTCTTGAGAAACAAGACTACATCAAAACAAAATCTAAAACTCCACCGAAACAGAATCAGAACTTGTAGCACCGAATAAAACATGATCCATCCGCATCTAGTTACCTCTCATTGCATCAACCACCAATTTGAAATGCTCCGCAATCAAATCTAAGCGCTTCACCATCAAGGCAGCTTCGTCATCCTCCAGTTTCTTCCACTTCTCCTCCAACATTTCAGCCTTGTCTGTAGCAATCAAACTCATCTTCTCCTTCAAAAAGCTCGATCCATTCGGATACATTGTAGACATGCCAGCCATACTTCCAAATGATGCAGCCAAACGTGGATATTTGGATTGGAAATCCTGTTGATCACCCGTAACTATATCCTCCGTAACGACCTCTTTTACAGCAACCTTTTTTTCTTCTTCCATTTGTTTATGCAAAAGTTGTTTCCCACCGAAACAGCAGCAAAGAGGCGGCAAGAAAACCTAGAAAGAGAAAGGGGGGAAGAAGCCTGAAGATTGCAGAAGAAGTGTATCAATAAATAGAAAATTTCATAAAATAACTTACCATATTCTTAATTACATATATTTTGAATATAAATATACATTCCATAATTTTTCTTGCTCATTAAAGAAATTATTAATAGTTCAAACATTGAAGTAAGGATATCATTCGGTCAAGCTGGGACAATCTGATTCATAAAAATGTGGTCACACTGTAGTTGCGCTAACCATAGCTAATGTTAAGGGGTGAGAATGGGGCCAGGGAAAGGATGTTCGGTTTAGAACCATATCTTTGTTAGTGTAGTTAACGGGCTAAATGGGCCAGACTGGGTTTACAATTTGGATTTCGTGTTCTATTACTCTCTAATAATAGCATTGACATCTACATTTAATAGAACCAGTTGTTTAGTTCTTGTCACATTTTAAAAATGAGTCGCTACTTAAAAAAATATATATACATACAAATAACATATACAAGATATACATAAATAGCCCCCAAGGACTAGCTCGAGTGGCAAAAGGTGGAGGATTTGTGGCTTAGGTCGCAAGTTCAAGCCCCGCACCATGCAAAGTGAGGGTAGAAGGGCGGACCCATCATCCACCGAGTTTACAAGGTTTTGATTGGTCCAAAGGGTCACCGGACGGATTACTCATTATAAAAAAAAAAGGTTTAAGCGGTTAGAGAAAGCACACTTTTATTATTTAATTATATTCTCAAAATCATTCCATACCTTTAAACTCAATCTTTTTTGCATCTGAATGTCCATATAATCTTATTTCTATTAGCAAAATTTACAAAAACATGAAATGCATTGTAACCTTCTTTAATGATTCTGTTCTTGTGTAGGATCAGAGCATGGGACAGGTGAGTCATAGGGATTGTACCTACTCTTTATCCCAACACTCGATGTTGTTTCTTCTAAATTGCTCCATAGTCAATTGGGTTATCCAAGTCTCTTGAATTGTCAAAGATGGTCCCAAGTTTATCTAGTTTATCTTCGTTCAAATGTGAGTTGTGTTAGCTTGGTAAGCACAATCCTGCCCCTTTCCTAAAACACATCAATAAACGGGCCACCTCTATGTTTGCTACTGTTCATTCAAATATATGGCCTGCAAGTCATGTGATTTTTCCTTAGGATTTCATTATCTTGTTACTTTTATTGGCTACTTCAGAATAAGGCCTTCAAATGTGTCTTTCTCGCATATTCTAGTCTACAAAAAGGTTACATTTGGCTTTGATACCTCTATTAATAAGTGCTTGATCACTGCAAATGTTACTTTTTTTGAGACATCTCCGTATTTTTCTCCTAATACGGAAAATCAGAAGGCCATAACAGTCCTTCTCATTCAAACTATTCCAACCCCAGCTCCATCTCCAAATTTTAAGGTCTATTTCCGACGACCTCAACCTCCTTTTGAACTTGCTAATCAAGTTGTTATTTCTAACTCATATAAAGGTGCACAAAGCAATCTTGGTGACTCATTACCAGCTCCAACAATGTCTTCTGCTCAGAGAGAACACACTTATTATTAAGTTGTATTCTCAACATGCCCCCTCACGTGCGGGCGGACTGGCCTGATTTTTTCATGGGTCAGGCACCTAGATATTCATTTTGATTATTTGGGTGGCGGAGATATTCGATCTCAGGACCTCTGTCTGCTTTGATACCTTATTAACATATGTGACAATCTCATCAAAAAGACAGTTATTAAGCAGAACATACTTTTATTATTTAATTATATTTCAATAGAAACAATTTAGATATATATTCTGAGTCTATCAGGGAAAAAAGGTATGACAGAGAGATCCATATAAGGAGGGCTGAAACCAAAAGAATCATAGAACGGTTCCATGTGATAAAAACATAATTCAGGATAGAATAATTGTGTAACAGACTATTATACAGCAGTTAATTGCATTTATGAGATGCTCAAGGTATTCATAAGATAATGTTGTCAAAGAACTGATATTAAAACAGATTTAAGATCTTATAAAACTGGACAACACTAGACACAAGTTAATTGGAAAATGTCAAAACTTATTACATCTAATAGAGTGCAGGTGGCACATATAGAAGATATAAAGTTAGATGCTTTCCCCGTGTGTTAAGACCTCCAAAATACACTGGTTTAGAAGTTCGACAACACGATAACTAAGGCTTTTATCGGGAATCTTTCACATATAGCACTTAAAAATAATAAATTACTCCCCATAGCTATATTTTGATAATTACAATTTGTAACTACATGTTATATGGAGGAGAGGCGAGGGAGACTAGGAGAGAGAGAGGAGAGAGGCGAGAGAGGGGAAAAAGAGTGGGAGAAAGGTGAATTGTATATGTATATTGGTTAGATAATTGTATATTATACATATGTATTTGTATATATGGCAAGAGAGATTGGGAGAGAGAGGCGGGAGCCGAGCAAGACTGGGAGAGAGAGGAGAGAGGCGAGCGAGATCGAGAGAGGGAGGAGAGAGGCGAGCGAGAGAGGGCAGAGAGTGGGAGAGAGGTGAATTGTATATGTATATAATTGTATATAACTGTATATTATACATATACATTTGTATAAATGACAAGCGAGATTGGGAGAGGGAGGATATTTAGGGGAGCAAGATTGAGAGGAGGAGAGAGGCGAGCGAGAGACGGCAGAGAGCGAGAGAGATGAATTGAATATGTATATAGGTTATAAAATTGTATATTATACATATTTATTTGTATATCCTGGCGAATTATACATATACAAACATGACTAATTATACAAACTCGAAGTCAGCCCACGTAATTAATGTATAATGTTAGTCGCGAATGATAATTATAACAAACTATATCTATGATGAGTAATTAAATAGTATAAGTTTGATTAGCCGCATAATTTTCCCATGTTTAATAGGTGAACTAAAATCACATTGAAGAAATAGTTTACAATCCCTGAAGTTCTTTGAAATCTATGTAGACTTGGTTAAAAACAGAACACAATCAAACCAAGAGATCTACATGAGTTATGACAAATAGTTGAGATTAAACTAGTCAATAGATACCATAGAGAGATGTCTGGGAGATTAAGGCAACCCCTAATTTGTCTTTTAAGACCTAATTATTCAGTATAGTAATGCAATGGGCCTGAATAAAACGAATGGATATTGAGAATTCAAATGATAACTGACCTCAATGGTTTCAGAAGTGCAAGTGTGTTGACATGCACATACATATAAAGGTGTATGTGTGCACATTCATGCGCTGCAAAATATCTTCACTGGGAAAGAATAGAGAATAAGCAGTTAAAGGTAACACCTAAGAAGCAGGAAACAACTCTATACCAAAAGAAATATCTCGATGAAACTGTAACTAACCCACCACCACCTCCCCAAATCAATTAACTGGTATGATAAGCTGGCATGAACAACGATAGAGAACAAAGCGAATCAACACAAACTGCAAAAATTGAGAAAGATCACATTTAAATATATTGCCATCTGGTTTAGGAAATTACATATTACAAAGGATGAACCCGAACAGCTCCAGACATTCCACTTTAGCTATTAATAAGTTTGCTTCCACCGTATATGGCATATATGATAGGAATGTGTAGGCATTTCATTGCAACCCCTTAGTAAAGACAATCACTCCATACCACACTAACATATATAAGAAGCAACACAGCGGATATCATCAAACCAGTTCACTAGTAAAACTAAGCAATAAAATGTATGGATCAACTTGATAAACTAAATCTACCTCACGGACTAAACATAAGTACACCATCGCGAGAAGAAAACTGTCTTGAGAAACAAGACTATATGAAACAAAACCTAAAACTCCACCGAAACAGCATCGGAAGTTGTAGCATCGAATAGAACATGATCCATCAGCATCTAGTTTCCACTCATTGCATTGACCACCAATCTATAATGCTCCGCAATCAAATCTAAACGGTTCACCATCAAGGCAGCTTCGTCATCCTCCAGTTTCTTCCACTTCTTATCCAACACTTTAGCCTTGTCAGTAGCAATGGAACTCATCTTCTCCTTCAAAAAACTTGTTCCATTCGGATACATTGTCGACATGCCAGCCATACTTTCAAATGAAGCAGTCAAATGTGGAAATTCAGACTGGAAATCCTGTTGATCACCCTTAACTATATCCTCCTTAACCACCTCTTTTACAGCAACCTGTTTCTCTTCTTCCTTATGTTTCTCATCATCCTTGGGTTTGCTGACTTTAGCACTTCTCTTAGGTTCAGAGCTCTTGTTAACCTCAACAGTAATTTTAGCTGTGCCATTAGTGCTAACTCCATTACTAGTTCCAGGGGCACCCCAAATCCTCTTTGAATGCTCAAAAACTAGATAATCCTGACCCTTCATGAAAACTGGCTCCTCACTATCTTTCACATTAGTCAAATATTTCGTCTTTAACCTCCTTACCTTGTCTCGGAGTCTCTTATTTGAAGCTTCAACCTGCAACTTCCCCCTGATGAATTCATGAAAAGCAGACATATCGGCAATAGGTTCCACACCTTTTACCGCCTTGTATTCAGCAATACCTTTGAGTAGAGCAAGCTGGTCGTCATCGCTCCATAGATTGCGAGGAGTAGCAGCTGATTTTTTCTCCTCTTCTTCTGCAATCTTGGGCTTCTTCCTCCCTTTCTCTGTCTGGGTATCTTGCGGCCTCTTTGCTGCTGGCTTCGATGGGGTGGCAGCTTTAGCAGGAACACTGGGCTTGATGGTGAAGTCCAATGCAGAAGGGGAAGGCAGGGAATGTCCGGATTCGGATCCTGACCCACTCTCGCTGCCGGAATCAGAAGAAAATTGGAGTTTCTGAGTGCTGGATCTCTTTACAACAGGATGTGCTGTCTTGGGTTCTTCAGTTTCTTCCCCTGATTCTTCTTCTCCTTCTTCCTCCCTCGATTGTTCTTCTTCTTCTTCCTGGGATTCCTCCACCAATTCTTGTTCTTCAGAGGACGATGCAGAAGGAGGCTGGTCTACTAAGCGGGATTTGGTTTTGGGGGCCATTGTTTCTGAAAGCAAGAAAAGAGAGCTATTCGGCCAACAGCTATGTCTATGGTGAG</genome_strand>
        <mrna_strand>CGAATCGGATCCTGACCCATTTTCGCTTCCAGACTCAGAAGAAAATTGGGGCTTCTGTGGTGTCTGAACTAGTTTTTGAGAAATGGGTTTCTTCACAACTGAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCTG-TCTTGGGTTCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTCAGTTTCTTCCCCTGATTCTTCTTCTCCTTCTTCCTCCCTCGATTGTTGTTCTTCTTCTTCCTGGGATTCCTCCACCAGTTCTTGTTCTTCAGAGGACGATGCAGAAGGAGGCTGGTCTACTAAGCGGGATTTGGTTTTGGGGGCCATTGTTTCTGCAAACAAGAAGAGAGAGCTATTCGGCCGTCAGCTGTGTCTATGGTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E274041" ref_strand="+" ref_description="SGN-E274041 [cLEN-8-H7]">
      <seq>gagactccgagacaaggtaaggaggttaaagacgaaatatttgactaatgtgaaagatagtgaggagccagttttcatgaagggtcaggattatctagtttttgagcattcaaagaggatttggggtgcccctggaactagtaatggagttagcactaatggcacagctaaaattactgttgaggttaacaagagctctgaacctaagagaagtgctaaagtcagcaaacccaaggatgatgagaaacataaggaagaagagaaacaggttgctgtaaaagaggtggttaaggaggatatagttaagggtgatcaacaggatttccagtctgaatttccacatttgactgcttcatttgaaagtatggctggcatgtcgacaatgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="125789" stop="126775"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="126089" g_stop="126475" g_length="387"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="387" r_length="387" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E274041" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>387</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E274041" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="126089" e_stop="126475"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGACTCCGAGACAAGGTAAGGAGGTTAAAGACGAAATATTTGACTAATGTGAAAGATAGTGAGGAGCCAGTTTTCATGAAGGGTCAGGATTATCTAGTTTTTGAGCATTCAAAGAGGATTTGGGGTGCCCCTGGAACTAGTAATGGAGTTAGCACTAATGGCACAGCTAAAATTACTGTTGAGGTTAACAAGAGCTCTGAACCTAAGAGAAGTGCTAAAGTCAGCAAACCCAAGGATGATGAGAAACATAAGGAAGAAGAGAAACAGGTTGCTGTAAAAGAGGTGGTTAAGGAGGATATAGTTAAGGGTGATCAACAGGATTTCCAGTCTGAATTTCCACATTTGACTGCTTCATTTGAAAGTATGGCTGGCATGTCGACAATGTA</genome_strand>
        <mrna_strand>GAGACTCCGAGACAAGGTAAGGAGGTTAAAGACGAAATATTTGACTAATGTGAAAGATAGTGAGGAGCCAGTTTTCATGAAGGGTCAGGATTATCTAGTTTTTGAGCATTCAAAGAGGATTTGGGGTGCCCCTGGAACTAGTAATGGAGTTAGCACTAATGGCACAGCTAAAATTACTGTTGAGGTTAACAAGAGCTCTGAACCTAAGAGAAGTGCTAAAGTCAGCAAACCCAAGGATGATGAGAAACATAAGGAAGAAGAGAAACAGGTTGCTGTAAAAGAGGTGGTTAAGGAGGATATAGTTAAGGGTGATCAACAGGATTTCCAGTCTGAATTTCCACATTTGACTGCTTCATTTGAAAGTATGGCTGGCATGTCGACAATGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E746382" ref_strand="+" ref_description="SGN-E746382 [GI|47105580]">
      <seq>ggcacaaaggcctttcatctttttgtctttgcttcatcactcaccatagacaccgacgacggccgaatagctctctcttcttgctttcagaaacaatggcccccaaaaccaaatcccgcttagtagaccaacctccttctgcatcatcttctgaagaacaagaattggtggaggaatgccaggaagaagaagaacaacaacaacaatcgagggaagaaactgaagaagaagaagaacctccagttgtgaagagatccatcactcagaaaccagtcaaaaccgctcagaagctccaattttcttctgagtccgacagcgagaatgggtcaggttccgaatcgaaaaaatcggatcattccccgccttccccttttgtatcagatttcaccattaagccgattgtttctgccccatcgaaatcagcaggaaagaggccgcaagaagcccagaaagagaaagggaggaagaagcccaagattgctgaagaagaggataaaaaatcagctgctactcctcgcagtctatggagcgatgacgaccagcttgctctgctcaaaggtattgctgaatacaagacggtaaaaggcatggaacctaatgcggatatgacagcttttcatgaattcattagaggaaagttgcaggttgaggtttcaaagagtcaactcagtgaaaagataaagaggttaaagaagaaattttttactaatgcgaaaggtgatgaggagccagttttcatgaagggtcaggattttttagtttttcagcattcaaagaggatttggggtgcccctggaactagtagtggagttaaggagattgttaccaatagcactaatggcaaagctaaaaagactgttgaggctaagaagagttctgaacctaagaaaagtggtaaagttagcaaacacaaggatgatgaggaacataaggaagaagagaaacaggttgctgttaaagaggtggttaaagaggatatagttaagggtgatcaacaggatttccaatccgaatatccacgtttggctgcatcatttgaaagtatgtctggcatgtttactatttacccaaatggaacaagttttttgaaggaaaagatgagtttgattgctcctgacaaggctaaagtattggaggagaagtggaagaaactggaggatgatgaagctgccttgatggtgaagcgcttagatttgattgcggagcattacagattggtggttgatgcaatgagaggtaactagatgctgatggatgatgtttctatttcgaaccgacaagttctgatactgttttggtggacttttagattttgtttcatgtagtcttgtttctcaaggcaatttcttctcgcgttgatgtactaatgtttagtcggcgaggtagatttagtttttcaggttgattcatacattttattgcttctttagttttactagtgaactgtttggatgatgcaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="136070" stop="138128"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="136369" g_stop="137825" g_length="1457"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1457" r_length="1457" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1459" polyA_stop="1476"/>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E746382" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1457</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E746382" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="136369" e_stop="137825"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCACAAAGGCCTTTCATCTTTTTGTCTTTGCTTCATCACTCACCATAGACACCGACGACGGCCGAATAGCTCTCTCTTCTTGCTTTCAGAAACAATGGCCCCCAAAACCAAATCCCGCTTAGTAGACCAACCTCCTTCTGCATCATCTTCTGAAGAACAAGAATTGGTGGAGGAATGCCAGGAAGAAGAAGAACAACAACAACAATCGAGGGAAGAAACTGAAGAAGAAGAAGAACCTCCAGTTGTGAAGAGATCCATCACTCAGAAACCAGTCAAAACCGCTCAGAAGCTCCAATTTTCTTCTGAGTCCGACAGCGAGAATGGGTCAGGTTCCGAATCGAAAAAATCGGATCATTCCCCGCCTTCCCCTTTTGTATCAGATTTCACCATTAAGCCGATTGTTTCTGCCCCATCGAAATCAGCAGGAAAGAGGCCGCAAGAAGCCCAGAAAGAGAAAGGGAGGAAGAAGCCCAAGATTGCTGAAGAAGAGGATAAAAAATCAGCTGCTACTCCTCGCAGTCTATGGAGCGATGACGACCAGCTTGCTCTGCTCAAAGGTATTGCTGAATACAAGACGGTAAAAGGCATGGAACCTAATGCGGATATGACAGCTTTTCATGAATTCATTAGAGGAAAGTTGCAGGTTGAGGTTTCAAAGAGTCAACTCAGTGAAAAGATAAAGAGGTTAAAGAAGAAATTTTTTACTAATGCGAAAGGTGATGAGGAGCCAGTTTTCATGAAGGGTCAGGATTTTTTAGTTTTTCAGCATTCAAAGAGGATTTGGGGTGCCCCTGGAACTAGTAGTGGAGTTAAGGAGATTGTTACCAATAGCACTAATGGCAAAGCTAAAAAGACTGTTGAGGCTAAGAAGAGTTCTGAACCTAAGAAAAGTGGTAAAGTTAGCAAACACAAGGATGATGAGGAACATAAGGAAGAAGAGAAACAGGTTGCTGTTAAAGAGGTGGTTAAAGAGGATATAGTTAAGGGTGATCAACAGGATTTCCAATCCGAATATCCACGTTTGGCTGCATCATTTGAAAGTATGTCTGGCATGTTTACTATTTACCCAAATGGAACAAGTTTTTTGAAGGAAAAGATGAGTTTGATTGCTCCTGACAAGGCTAAAGTATTGGAGGAGAAGTGGAAGAAACTGGAGGATGATGAAGCTGCCTTGATGGTGAAGCGCTTAGATTTGATTGCGGAGCATTACAGATTGGTGGTTGATGCAATGAGAGGTAACTAGATGCTGATGGATGATGTTTCTATTTCGAACCGACAAGTTCTGATACTGTTTTGGTGGACTTTTAGATTTTGTTTCATGTAGTCTTGTTTCTCAAGGCAATTTCTTCTCGCGTTGATGTACTAATGTTTAGTCGGCGAGGTAGATTTAGTTTTTCAGGTTGATTCATACATTTTATTGCTTCTTTAGTTTTACTAGTGAACTGTTTGGATGATG</genome_strand>
        <mrna_strand>GGCACAAAGGCCTTTCATCTTTTTGTCTTTGCTTCATCACTCACCATAGACACCGACGACGGCCGAATAGCTCTCTCTTCTTGCTTTCAGAAACAATGGCCCCCAAAACCAAATCCCGCTTAGTAGACCAACCTCCTTCTGCATCATCTTCTGAAGAACAAGAATTGGTGGAGGAATGCCAGGAAGAAGAAGAACAACAACAACAATCGAGGGAAGAAACTGAAGAAGAAGAAGAACCTCCAGTTGTGAAGAGATCCATCACTCAGAAACCAGTCAAAACCGCTCAGAAGCTCCAATTTTCTTCTGAGTCCGACAGCGAGAATGGGTCAGGTTCCGAATCGAAAAAATCGGATCATTCCCCGCCTTCCCCTTTTGTATCAGATTTCACCATTAAGCCGATTGTTTCTGCCCCATCGAAATCAGCAGGAAAGAGGCCGCAAGAAGCCCAGAAAGAGAAAGGGAGGAAGAAGCCCAAGATTGCTGAAGAAGAGGATAAAAAATCAGCTGCTACTCCTCGCAGTCTATGGAGCGATGACGACCAGCTTGCTCTGCTCAAAGGTATTGCTGAATACAAGACGGTAAAAGGCATGGAACCTAATGCGGATATGACAGCTTTTCATGAATTCATTAGAGGAAAGTTGCAGGTTGAGGTTTCAAAGAGTCAACTCAGTGAAAAGATAAAGAGGTTAAAGAAGAAATTTTTTACTAATGCGAAAGGTGATGAGGAGCCAGTTTTCATGAAGGGTCAGGATTTTTTAGTTTTTCAGCATTCAAAGAGGATTTGGGGTGCCCCTGGAACTAGTAGTGGAGTTAAGGAGATTGTTACCAATAGCACTAATGGCAAAGCTAAAAAGACTGTTGAGGCTAAGAAGAGTTCTGAACCTAAGAAAAGTGGTAAAGTTAGCAAACACAAGGATGATGAGGAACATAAGGAAGAAGAGAAACAGGTTGCTGTTAAAGAGGTGGTTAAAGAGGATATAGTTAAGGGTGATCAACAGGATTTCCAATCCGAATATCCACGTTTGGCTGCATCATTTGAAAGTATGTCTGGCATGTTTACTATTTACCCAAATGGAACAAGTTTTTTGAAGGAAAAGATGAGTTTGATTGCTCCTGACAAGGCTAAAGTATTGGAGGAGAAGTGGAAGAAACTGGAGGATGATGAAGCTGCCTTGATGGTGAAGCGCTTAGATTTGATTGCGGAGCATTACAGATTGGTGGTTGATGCAATGAGAGGTAACTAGATGCTGATGGATGATGTTTCTATTTCGAACCGACAAGTTCTGATACTGTTTTGGTGGACTTTTAGATTTTGTTTCATGTAGTCTTGTTTCTCAAGGCAATTTCTTCTCGCGTTGATGTACTAATGTTTAGTCGGCGAGGTAGATTTAGTTTTTCAGGTTGATTCATACATTTTATTGCTTCTTTAGTTTTACTAGTGAACTGTTTGGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E347389" ref_strand="+" ref_description="SGN-E347389 [cTOF-33-N14]">
      <seq>actcaccatagacaccgacgacggccgaatagctctctcttcttgctttcagaaacaatggcccccaaaaccaaatcccgcttagtagaccaacctccttctgcatcatcttctgaagaacaagaattggtggaggaatgccaggaagaagaagaacaacaacaacaatcgagggaagaaactgaagaagaagaagaacctccagttgtgaagagatccatcactcagaaaccagtcaaaaccgctcagaagctccaattttcttctgagtccgacagcgagaatgggtcaggttccgaatcgaaaaaatcggatcattccccgccttccccttttgtatcagatttcaccattaagccgattgtttctgccccatcgaaatcagcaggaaagaggccgcaagaagcccagaaagagaaagggaggaagaagcccaagattgctgaagaagaggataaaaaatcagctgctactcctcgcagtctatggagcgatgacgaccagcttgctctgctcaaaggtattgctgaatacaagacggtaaaaggcatggaacctaatgcggatatgacagcttttcatgaattcattagaggaaagttgcaggttgaggtttcaaagagtcaactcagtgaaaagataaagaggttaaagaagaaattttttactaatgccgaaggtgatgaggagccagttttcatgaaaggtcangattttttagtttttcagcattca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="136107" stop="137441"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="136407" g_stop="137141" g_length="735"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="735" r_length="735" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E347389" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>735</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E347389" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="136407" e_stop="137141"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTCACCATAGACACCGACGACGGCCGAATAGCTCTCTCTTCTTGCTTTCAGAAACAATGGCCCCCAAAACCAAATCCCGCTTAGTAGACCAACCTCCTTCTGCATCATCTTCTGAAGAACAAGAATTGGTGGAGGAATGCCAGGAAGAAGAAGAACAACAACAACAATCGAGGGAAGAAACTGAAGAAGAAGAAGAACCTCCAGTTGTGAAGAGATCCATCACTCAGAAACCAGTCAAAACCGCTCAGAAGCTCCAATTTTCTTCTGAGTCCGACAGCGAGAATGGGTCAGGTTCCGAATCGAAAAAATCGGATCATTCCCCGCCTTCCCCTTTTGTATCAGATTTCACCATTAAGCCGATTGTTTCTGCCCCATCGAAATCAGCAGGAAAGAGGCCGCAAGAAGCCCAGAAAGAGAAAGGGAGGAAGAAGCCCAAGATTGCTGAAGAAGAGGATAAAAAATCAGCTGCTACTCCTCGCAGTCTATGGAGCGATGACGACCAGCTTGCTCTGCTCAAAGGTATTGCTGAATACAAGACGGTAAAAGGCATGGAACCTAATGCGGATATGACAGCTTTTCATGAATTCATTAGAGGAAAGTTGCAGGTTGAGGTTTCAAAGAGTCAACTCAGTGAAAAGATAAAGAGGTTAAAGAAGAAATTTTTTACTAATGCGAAAGGTGATGAGGAGCCAGTTTTCATGAAGGGTCAGGATTTTTTAGTTTTTCAGCATTCA</genome_strand>
        <mrna_strand>ACTCACCATAGACACCGACGACGGCCGAATAGCTCTCTCTTCTTGCTTTCAGAAACAATGGCCCCCAAAACCAAATCCCGCTTAGTAGACCAACCTCCTTCTGCATCATCTTCTGAAGAACAAGAATTGGTGGAGGAATGCCAGGAAGAAGAAGAACAACAACAACAATCGAGGGAAGAAACTGAAGAAGAAGAAGAACCTCCAGTTGTGAAGAGATCCATCACTCAGAAACCAGTCAAAACCGCTCAGAAGCTCCAATTTTCTTCTGAGTCCGACAGCGAGAATGGGTCAGGTTCCGAATCGAAAAAATCGGATCATTCCCCGCCTTCCCCTTTTGTATCAGATTTCACCATTAAGCCGATTGTTTCTGCCCCATCGAAATCAGCAGGAAAGAGGCCGCAAGAAGCCCAGAAAGAGAAAGGGAGGAAGAAGCCCAAGATTGCTGAAGAAGAGGATAAAAAATCAGCTGCTACTCCTCGCAGTCTATGGAGCGATGACGACCAGCTTGCTCTGCTCAAAGGTATTGCTGAATACAAGACGGTAAAAGGCATGGAACCTAATGCGGATATGACAGCTTTTCATGAATTCATTAGAGGAAAGTTGCAGGTTGAGGTTTCAAAGAGTCAACTCAGTGAAAAGATAAAGAGGTTAAAGAAGAAATTTTTTACTAATGCCGAAGGTGATGAGGAGCCAGTTTTCATGAAAGGTCANGATTTTTTAGTTTTTCAGCATTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E347680" ref_strand="+" ref_description="SGN-E347680 [cTOF-26-A5]">
      <seq>actcaccatagacaccgacgacggccgaatagctctctcttcttgctttcagaaacaatggcccccaaaaccaaatcccgcttagtagaccaacctccttctgcatcatcttctgaagaacaagaattggtggaggaatgccaggaagaagaagaacaacaacaacaatcgagggaagaaactgaagaagaagaagaacctccagttgtgaagagatccatcactcagaaaccagtcaaaaccgctcagaagctccaattttcttctgagtccgacagcgagaatgggtcaggttccgaatcgaaaaaatcggatcattccccgccttccccttttgtatcagatttcaccattaagccgattgtttctgccccatcgaaatcagcaggaaagaggccgcaagaagcccagaaagagaaagggaggaagaagcccaagattgctgaagaagaggataaaaaatcagctgctactcctcgcagtctatggagcgatgacgaccagcttgctctgctcaaaggtattgctgaatacaagacggtaaaaggcatggaacctaatgcggatatgancagctttcatgaattcattagaggaaagttgcaggttgagggttcaaagagtcaactcagtgaaaagataaggaggttaagaagaaatnttttactaatgcggaaggtgatgaagagccaggtttcataagggtcaggattttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="136107" stop="137424"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="136407" g_stop="137125" g_length="719"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="717" r_length="717" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E347680" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>719</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E347680" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="136407" e_stop="137125"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTCACCATAGACACCGACGACGGCCGAATAGCTCTCTCTTCTTGCTTTCAGAAACAATGGCCCCCAAAACCAAATCCCGCTTAGTAGACCAACCTCCTTCTGCATCATCTTCTGAAGAACAAGAATTGGTGGAGGAATGCCAGGAAGAAGAAGAACAACAACAACAATCGAGGGAAGAAACTGAAGAAGAAGAAGAACCTCCAGTTGTGAAGAGATCCATCACTCAGAAACCAGTCAAAACCGCTCAGAAGCTCCAATTTTCTTCTGAGTCCGACAGCGAGAATGGGTCAGGTTCCGAATCGAAAAAATCGGATCATTCCCCGCCTTCCCCTTTTGTATCAGATTTCACCATTAAGCCGATTGTTTCTGCCCCATCGAAATCAGCAGGAAAGAGGCCGCAAGAAGCCCAGAAAGAGAAAGGGAGGAAGAAGCCCAAGATTGCTGAAGAAGAGGATAAAAAATCAGCTGCTACTCCTCGCAGTCTATGGAGCGATGACGACCAGCTTGCTCTGCTCAAAGGTATTGCTGAATACAAGACGGTAAAAGGCATGGAACCTAATGCGGATATGA-CAGCTTTTCATGAATTCATTAGAGGAAAGTTGCAGGTTGAGGTTTCAAAGAGTCAACTCAGTGAAAAGATAAAGAGGTTAAAGAAGAAATTTTTTACTAATGCGAAAGGTGATGAGGAGCCAGTTTTCATGAAGGGTCAGGATTTTTT</genome_strand>
        <mrna_strand>ACTCACCATAGACACCGACGACGGCCGAATAGCTCTCTCTTCTTGCTTTCAGAAACAATGGCCCCCAAAACCAAATCCCGCTTAGTAGACCAACCTCCTTCTGCATCATCTTCTGAAGAACAAGAATTGGTGGAGGAATGCCAGGAAGAAGAAGAACAACAACAACAATCGAGGGAAGAAACTGAAGAAGAAGAAGAACCTCCAGTTGTGAAGAGATCCATCACTCAGAAACCAGTCAAAACCGCTCAGAAGCTCCAATTTTCTTCTGAGTCCGACAGCGAGAATGGGTCAGGTTCCGAATCGAAAAAATCGGATCATTCCCCGCCTTCCCCTTTTGTATCAGATTTCACCATTAAGCCGATTGTTTCTGCCCCATCGAAATCAGCAGGAAAGAGGCCGCAAGAAGCCCAGAAAGAGAAAGGGAGGAAGAAGCCCAAGATTGCTGAAGAAGAGGATAAAAAATCAGCTGCTACTCCTCGCAGTCTATGGAGCGATGACGACCAGCTTGCTCTGCTCAAAGGTATTGCTGAATACAAGACGGTAAAAGGCATGGAACCTAATGCGGATATGANCAGC-TTTCATGAATTCATTAGAGGAAAGTTGCAGGTTGAGGGTTCAAAGAGTCAACTCAGTGAAAAGATAAGGAGGTT-AAGAAGAAATNTTTTACTAATGCGGAAGGTGATGAAGAGCCAGGTTTCAT-AAGGGTCAGGATTTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E323100" ref_strand="+" ref_description="SGN-E323100 [cTOB-28-O24]">
      <seq>cgacgacggccgaatagctctctcttcttgctttcagaaacaatggcccccaaaaccaaatcccgcttagtagaccaacctccttctgcatcatcttctgaagaacaagaattggtggaggaatgccaggaagaagaagaacaacaacaacaatcgagggaagaaactgaagaagaagaagaacctccagttgtgaagagatccatcactcagaaaccagtcaaaaccgctcagaagctccaattttcttctgagtccgacagcgagaatgggtcaggttccgaatcgaaaaaatcggatcattccccgccttccccttttgtatcagatttcaccattaagccgattgtttctgccccatcgaaatcagcaggaaagaggccgcaagaagcccagaaagagaaagggaggaagaagcccaagattgctgaagaagaagataaaaaatcagctgctactcctcgcagtctatggagcgatgacgaccagcttgctctgctcaaagtattgctgaatacnagacggtaaaaggcatggaacctaatgcggatatgacagcttttcatgaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="136122" stop="137293"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="136422" g_stop="136993" g_length="572"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="571" r_length="571" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E323100" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>572</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E323100" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="136422" e_stop="136993"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGACGACGGCCGAATAGCTCTCTCTTCTTGCTTTCAGAAACAATGGCCCCCAAAACCAAATCCCGCTTAGTAGACCAACCTCCTTCTGCATCATCTTCTGAAGAACAAGAATTGGTGGAGGAATGCCAGGAAGAAGAAGAACAACAACAACAATCGAGGGAAGAAACTGAAGAAGAAGAAGAACCTCCAGTTGTGAAGAGATCCATCACTCAGAAACCAGTCAAAACCGCTCAGAAGCTCCAATTTTCTTCTGAGTCCGACAGCGAGAATGGGTCAGGTTCCGAATCGAAAAAATCGGATCATTCCCCGCCTTCCCCTTTTGTATCAGATTTCACCATTAAGCCGATTGTTTCTGCCCCATCGAAATCAGCAGGAAAGAGGCCGCAAGAAGCCCAGAAAGAGAAAGGGAGGAAGAAGCCCAAGATTGCTGAAGAAGAGGATAAAAAATCAGCTGCTACTCCTCGCAGTCTATGGAGCGATGACGACCAGCTTGCTCTGCTCAAAGGTATTGCTGAATACAAGACGGTAAAAGGCATGGAACCTAATGCGGATATGACAGCTTTTCATGAATT</genome_strand>
        <mrna_strand>CGACGACGGCCGAATAGCTCTCTCTTCTTGCTTTCAGAAACAATGGCCCCCAAAACCAAATCCCGCTTAGTAGACCAACCTCCTTCTGCATCATCTTCTGAAGAACAAGAATTGGTGGAGGAATGCCAGGAAGAAGAAGAACAACAACAACAATCGAGGGAAGAAACTGAAGAAGAAGAAGAACCTCCAGTTGTGAAGAGATCCATCACTCAGAAACCAGTCAAAACCGCTCAGAAGCTCCAATTTTCTTCTGAGTCCGACAGCGAGAATGGGTCAGGTTCCGAATCGAAAAAATCGGATCATTCCCCGCCTTCCCCTTTTGTATCAGATTTCACCATTAAGCCGATTGTTTCTGCCCCATCGAAATCAGCAGGAAAGAGGCCGCAAGAAGCCCAGAAAGAGAAAGGGAGGAAGAAGCCCAAGATTGCTGAAGAAGAAGATAAAAAATCAGCTGCTACTCCTCGCAGTCTATGGAGCGATGACGACCAGCTTGCTCTGCTCAAA-GTATTGCTGAATACNAGACGGTAAAAGGCATGGAACCTAATGCGGATATGACAGCTTTTCATGAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E300878" ref_strand="+" ref_description="SGN-E300878 [cLEW-8-P7]">
      <seq>ctctctcttcttgctttcagaaacaatggcccccaaaaccaaatcccgcttagtagaccaacctccttctgcatcatcttctgaagaacaagaattggtggaggaatgccaggaagaagaagaacaacaacaacaatcgagggaagaaactgaggaagaagaagaacctccagttgtgaagagatccatcactcagaaaccagtcaaaaccgctcagaagctccaattttcttctgagtccgacagcgagaatgggtcacgttccgaatcgaaaaaatcggatcattccccgccttccccttttgtatcagatttcaccattaagccgattgtatctgccccatcgaaatcagcaggaaagaggccgcaagaagcccacaaagagaaagggaggaagaagcccaagattgctgaagaagaggataaaaaatcagctgctactcctcgcagtctatggagcgatgacgaccagcttgctctgctcaaaagtattgctgaatacaagacggtgaaaggcatggaacctaatgcggatatgacagcttttcatgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="136139" stop="137291"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="136439" g_stop="136991" g_length="553"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="553" r_length="553" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E300878" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E300878" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="136439" e_stop="136991"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTCTCTTCTTGCTTTCAGAAACAATGGCCCCCAAAACCAAATCCCGCTTAGTAGACCAACCTCCTTCTGCATCATCTTCTGAAGAACAAGAATTGGTGGAGGAATGCCAGGAAGAAGAAGAACAACAACAACAATCGAGGGAAGAAACTGAAGAAGAAGAAGAACCTCCAGTTGTGAAGAGATCCATCACTCAGAAACCAGTCAAAACCGCTCAGAAGCTCCAATTTTCTTCTGAGTCCGACAGCGAGAATGGGTCAGGTTCCGAATCGAAAAAATCGGATCATTCCCCGCCTTCCCCTTTTGTATCAGATTTCACCATTAAGCCGATTGTTTCTGCCCCATCGAAATCAGCAGGAAAGAGGCCGCAAGAAGCCCAGAAAGAGAAAGGGAGGAAGAAGCCCAAGATTGCTGAAGAAGAGGATAAAAAATCAGCTGCTACTCCTCGCAGTCTATGGAGCGATGACGACCAGCTTGCTCTGCTCAAAGGTATTGCTGAATACAAGACGGTAAAAGGCATGGAACCTAATGCGGATATGACAGCTTTTCATGAA</genome_strand>
        <mrna_strand>CTCTCTCTTCTTGCTTTCAGAAACAATGGCCCCCAAAACCAAATCCCGCTTAGTAGACCAACCTCCTTCTGCATCATCTTCTGAAGAACAAGAATTGGTGGAGGAATGCCAGGAAGAAGAAGAACAACAACAACAATCGAGGGAAGAAACTGAGGAAGAAGAAGAACCTCCAGTTGTGAAGAGATCCATCACTCAGAAACCAGTCAAAACCGCTCAGAAGCTCCAATTTTCTTCTGAGTCCGACAGCGAGAATGGGTCACGTTCCGAATCGAAAAAATCGGATCATTCCCCGCCTTCCCCTTTTGTATCAGATTTCACCATTAAGCCGATTGTATCTGCCCCATCGAAATCAGCAGGAAAGAGGCCGCAAGAAGCCCACAAAGAGAAAGGGAGGAAGAAGCCCAAGATTGCTGAAGAAGAGGATAAAAAATCAGCTGCTACTCCTCGCAGTCTATGGAGCGATGACGACCAGCTTGCTCTGCTCAAAAGTATTGCTGAATACAAGACGGTGAAAGGCATGGAACCTAATGCGGATATGACAGCTTTTCATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E432698" ref_strand="+" ref_description="SGN-E432698 [STM-57-M16]">
      <seq>tcttttttttagtaaaactaaataagcaataacatgtattaatcaacctgaaaaactaaatctacctcgcggactaaacataagtacatcaacgcgagaagaaattgtcttgagaaacaagattatatgaaacaaaatccaaaactccaccaaaacagtatcagaacttgtagcatcgaatagaaacatgatccatcagcatctagttacctcgcattgcatcaaccaccaatccgtaatgctccgcaatcaaatctaagcgcttcaccatcaaggcagcttcatcatcctccagtttcttccacttctcctccagcagtttagccttgtcaggagcaatcaaactcatcttctccttcaaaaaacttgttccattagggtacattgtaaacatgccagacatactttcaaatgatgcagccaaacgtggatattcggactggaaatcctgtggatcacccttaactatatcctccttaaccacctcttttacagcaacctgattctcttcttccttatgtttctcatcatccttgggtttgctaactttagcactgctcttaggttcagaattcttcttaacctcaacagtctttttagctttgccattagtgctattggtaacaatttccttaactccatcactagtttcaggggcaccccaaattctctttgaatgctcaaaaactaaaaactcctgacccttcatgaaaactggttcctcaccacctttcgcattagtcnaaaaattcttctttaacctctttagcttttcacggagttgactctttgaaacctcaaccagcaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="138106" stop="136705"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="137815" g_stop="137005" g_length="811"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="810" r_length="810" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-E432698" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>811</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E432698" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="137815" e_stop="137005"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAGTTCACTAGTAAAACTAAAGAAGCAATAAAATGTATGAATCAACCTGAAAAACTAAATCTACCTCGCCGACTAAACATTAGTACATCAACGCGAGAAGAAATTGCCTTGAGAAACAAGACTACATGAAACAAAATCTAAAAGTCCACCAAAACAGTATCAGAACTTGTCGGTTCGAAATAGAAACATCATCCATCAGCATCTAGTTACCTCTCATTGCATCAACCACCAATCTGTAATGCTCCGCAATCAAATCTAAGCGCTTCACCATCAAGGCAGCTTCATCATCCTCCAGTTTCTTCCACTTCTCCTCCAATACTTTAGCCTTGTCAGGAGCAATCAAACTCATCTTTTCCTTCAAAAAACTTGTTCCATTTGGGTAAATAGTAAACATGCCAGACATACTTTCAAATGATGCAGCCAAACGTGGATATTCGGATTGGAAATCCTGTTGATCACCCTTAACTATATCCTCTTTAACCACCTCTTTAACAGCAACCTGTTTCTCTTCTTCCTTATGTTCCTCATCATCCTTGTGTTTGCTAACTTTACCACTTTTCTTAGGTTCAGAACTCTTCTTAGCCTCAACAGTCTTTTTAGCTTTGCCATTAGTGCTATTGGTAACAATCTCCTTAACTCCACTACTAGTTCCAGGGGCACCCCAAATCCTCTTTGAATGCTGAAAAACTAAAAAATCCTGACCCTTCATGAAAACTGGCTCCTCATCACCTTTCGCATTAGTAAAAAATTTCTTCTTTAACCTCTTTATCTTTTCACTGAGTTGACTCTTTGAAACCTCAACCTGCAACT</genome_strand>
        <mrna_strand>TCTTTTTTTTAGTAAAACTAAATAAGCAATAACATGTATTAATCAACCTGAAAAACTAAATCTACCTCGCGGACTAAACATAAGTACATCAACGCGAGAAGAAATTGTCTTGAGAAACAAGATTATATGAAACAAAATCCAAAACTCCACCAAAACAGTATCAGAACTTGTAGCATCG-AATAGAAACATGATCCATCAGCATCTAGTTACCTCGCATTGCATCAACCACCAATCCGTAATGCTCCGCAATCAAATCTAAGCGCTTCACCATCAAGGCAGCTTCATCATCCTCCAGTTTCTTCCACTTCTCCTCCAGCAGTTTAGCCTTGTCAGGAGCAATCAAACTCATCTTCTCCTTCAAAAAACTTGTTCCATTAGGGTACATTGTAAACATGCCAGACATACTTTCAAATGATGCAGCCAAACGTGGATATTCGGACTGGAAATCCTGTGGATCACCCTTAACTATATCCTCCTTAACCACCTCTTTTACAGCAACCTGATTCTCTTCTTCCTTATGTTTCTCATCATCCTTGGGTTTGCTAACTTTAGCACTGCTCTTAGGTTCAGAATTCTTCTTAACCTCAACAGTCTTTTTAGCTTTGCCATTAGTGCTATTGGTAACAATTTCCTTAACTCCATCACTAGTTTCAGGGGCACCCCAAATTCTCTTTGAATGCTCAAAAACTAAAAACTCCTGACCCTTCATGAAAACTGGTTCCTCACCACCTTTCGCATTAGTCNAAAAATTCTTCTTTAACCTCTTTAGCTTTTCACGGAGTTGACTCTTTGAAACCTCAACCAGCAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E556431" ref_strand="+" ref_description="SGN-E556431 [cTSD-3-H19]">
      <seq>gaggatttggggtgcccctggaactagtagtggagttaaggagattgttaccaatagcactaatggcaaagctaaaaagactgttgaggctaagaagagttctgaacctaagaaaagtggtaaagttagcaaacacaaggatgatgaggaacataaggaagaagagaaacaggttgctgttaaagaggtggttaaagaggatatagttaagggtgatcaacaggatttccaatccgaatatccacgtttggctgcatcatttgaaagtatgtctggcatgtttactatttacccaaatggaacaagttttttgaaggaaaagatgagtttgattgctcctgacaaggctaaagtattggaggagaagtggaagaaactggaggatgatgaagctgccttgatggtgaagcgcttagatttgattgcggagcattacagattggtggttgatgcaatgagaggtaactagatgctgatggatgatgtttctatttcgaaccgacaagttctgatactgttttggtggacttttagattttgtttcatgtagtcttgtttctcaaggcaatttcttctcgcgttgatgtactaatgtttagtcggcgaggtagatttagtttttcaggttgattcatacattttattgcttctttagttttactagtgaactgtttggatgatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="136844" stop="138126"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="137144" g_stop="137826" g_length="683"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="683" r_length="683" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E556431" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>683</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E556431" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="137144" e_stop="137826"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGATTTGGGGTGCCCCTGGAACTAGTAGTGGAGTTAAGGAGATTGTTACCAATAGCACTAATGGCAAAGCTAAAAAGACTGTTGAGGCTAAGAAGAGTTCTGAACCTAAGAAAAGTGGTAAAGTTAGCAAACACAAGGATGATGAGGAACATAAGGAAGAAGAGAAACAGGTTGCTGTTAAAGAGGTGGTTAAAGAGGATATAGTTAAGGGTGATCAACAGGATTTCCAATCCGAATATCCACGTTTGGCTGCATCATTTGAAAGTATGTCTGGCATGTTTACTATTTACCCAAATGGAACAAGTTTTTTGAAGGAAAAGATGAGTTTGATTGCTCCTGACAAGGCTAAAGTATTGGAGGAGAAGTGGAAGAAACTGGAGGATGATGAAGCTGCCTTGATGGTGAAGCGCTTAGATTTGATTGCGGAGCATTACAGATTGGTGGTTGATGCAATGAGAGGTAACTAGATGCTGATGGATGATGTTTCTATTTCGAACCGACAAGTTCTGATACTGTTTTGGTGGACTTTTAGATTTTGTTTCATGTAGTCTTGTTTCTCAAGGCAATTTCTTCTCGCGTTGATGTACTAATGTTTAGTCGGCGAGGTAGATTTAGTTTTTCAGGTTGATTCATACATTTTATTGCTTCTTTAGTTTTACTAGTGAACTGTTTGGATGATGA</genome_strand>
        <mrna_strand>GAGGATTTGGGGTGCCCCTGGAACTAGTAGTGGAGTTAAGGAGATTGTTACCAATAGCACTAATGGCAAAGCTAAAAAGACTGTTGAGGCTAAGAAGAGTTCTGAACCTAAGAAAAGTGGTAAAGTTAGCAAACACAAGGATGATGAGGAACATAAGGAAGAAGAGAAACAGGTTGCTGTTAAAGAGGTGGTTAAAGAGGATATAGTTAAGGGTGATCAACAGGATTTCCAATCCGAATATCCACGTTTGGCTGCATCATTTGAAAGTATGTCTGGCATGTTTACTATTTACCCAAATGGAACAAGTTTTTTGAAGGAAAAGATGAGTTTGATTGCTCCTGACAAGGCTAAAGTATTGGAGGAGAAGTGGAAGAAACTGGAGGATGATGAAGCTGCCTTGATGGTGAAGCGCTTAGATTTGATTGCGGAGCATTACAGATTGGTGGTTGATGCAATGAGAGGTAACTAGATGCTGATGGATGATGTTTCTATTTCGAACCGACAAGTTCTGATACTGTTTTGGTGGACTTTTAGATTTTGTTTCATGTAGTCTTGTTTCTCAAGGCAATTTCTTCTCGCGTTGATGTACTAATGTTTAGTCGGCGAGGTAGATTTAGTTTTTCAGGTTGATTCATACATTTTATTGCTTCTTTAGTTTTACTAGTGAACTGTTTGGATGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E551899" ref_strand="+" ref_description="SGN-E551899 [cTSB-2-D16]">
      <seq>gaggatttggggtgcccctggaactagtagtggagttaaggagattgttaccaatagcactaatggcaaagctaaaaagactgttgaggctaagaagagttctgaacctaagaaaagtggtaaagttagcaaacacaaggatgatgaggaacataaggaagaagagaaacaggttgctgttaaagaggtggttaaagaggatatagttaagggtgatcaacaggatttccaatccgaatatccacgtttggctgcatcatttgaaagtatgtctggcatgtttactatttacccaaatggaacaagttttttgaaggaaaagatgagtttgattgctcctgacaaggctaaagtattggaggagaagtggaagaaactggaggatgatgaagctgccttgatggtgaagcgcttagatttgattgcggagcattacagattggtggttgatgcaatgagaggtaactagatgctgatggatgatgtttctatttcgaaccgacaagttctgatactgttttggtggacttttagattttgtttcatgtagtcttgtttctcaaggcaatttcttctcgcgttgatgtactaatgtttagtcggcgaggtagatttagtttttcaggttgattcatacattttattgcttctttagttttactagtgaactgtttggatgatgaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaatccggggggggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="136844" stop="138128"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="137144" g_stop="137825" g_length="682"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="682" r_length="682" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="693" polyA_stop="732"/>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E551899" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>682</cumulative_length_of_scored_exons>
        <coverage percentage="0.918" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E551899" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="137144" e_stop="137825"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGATTTGGGGTGCCCCTGGAACTAGTAGTGGAGTTAAGGAGATTGTTACCAATAGCACTAATGGCAAAGCTAAAAAGACTGTTGAGGCTAAGAAGAGTTCTGAACCTAAGAAAAGTGGTAAAGTTAGCAAACACAAGGATGATGAGGAACATAAGGAAGAAGAGAAACAGGTTGCTGTTAAAGAGGTGGTTAAAGAGGATATAGTTAAGGGTGATCAACAGGATTTCCAATCCGAATATCCACGTTTGGCTGCATCATTTGAAAGTATGTCTGGCATGTTTACTATTTACCCAAATGGAACAAGTTTTTTGAAGGAAAAGATGAGTTTGATTGCTCCTGACAAGGCTAAAGTATTGGAGGAGAAGTGGAAGAAACTGGAGGATGATGAAGCTGCCTTGATGGTGAAGCGCTTAGATTTGATTGCGGAGCATTACAGATTGGTGGTTGATGCAATGAGAGGTAACTAGATGCTGATGGATGATGTTTCTATTTCGAACCGACAAGTTCTGATACTGTTTTGGTGGACTTTTAGATTTTGTTTCATGTAGTCTTGTTTCTCAAGGCAATTTCTTCTCGCGTTGATGTACTAATGTTTAGTCGGCGAGGTAGATTTAGTTTTTCAGGTTGATTCATACATTTTATTGCTTCTTTAGTTTTACTAGTGAACTGTTTGGATGATG</genome_strand>
        <mrna_strand>GAGGATTTGGGGTGCCCCTGGAACTAGTAGTGGAGTTAAGGAGATTGTTACCAATAGCACTAATGGCAAAGCTAAAAAGACTGTTGAGGCTAAGAAGAGTTCTGAACCTAAGAAAAGTGGTAAAGTTAGCAAACACAAGGATGATGAGGAACATAAGGAAGAAGAGAAACAGGTTGCTGTTAAAGAGGTGGTTAAAGAGGATATAGTTAAGGGTGATCAACAGGATTTCCAATCCGAATATCCACGTTTGGCTGCATCATTTGAAAGTATGTCTGGCATGTTTACTATTTACCCAAATGGAACAAGTTTTTTGAAGGAAAAGATGAGTTTGATTGCTCCTGACAAGGCTAAAGTATTGGAGGAGAAGTGGAAGAAACTGGAGGATGATGAAGCTGCCTTGATGGTGAAGCGCTTAGATTTGATTGCGGAGCATTACAGATTGGTGGTTGATGCAATGAGAGGTAACTAGATGCTGATGGATGATGTTTCTATTTCGAACCGACAAGTTCTGATACTGTTTTGGTGGACTTTTAGATTTTGTTTCATGTAGTCTTGTTTCTCAAGGCAATTTCTTCTCGCGTTGATGTACTAATGTTTAGTCGGCGAGGTAGATTTAGTTTTTCAGGTTGATTCATACATTTTATTGCTTCTTTAGTTTTACTAGTGAACTGTTTGGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E279440" ref_strand="+" ref_description="SGN-E279440 [cLER-11-D18]">
      <seq>taaagttagcaaacacaaggatgatgaggaacataaggaagaagagaaacaggttgctgttaaagaggtggttaaagaggatatagttaagggtgatcaacaggatttccaatccgaatatccacgtttggctgcatcatttgaaagtatgtctggcatgtttactatttacccaaatggaacaagttttttgaaggaaaagatgagtttgattgctcctgacaaggctaaagtattggaggagaagtggaagaaactggaggatgatgaagctgccttgatggtgaagcgcttagatttgattgcggagcattacagattggtggttgatgcaatgagaggtaactagatgctgatggatgatgtttctatttcgaaccgacaagttctgatactgttttggtggacttttagattttgtttcatgtagtcttgtttctcaaggcaatttcttctcgcgttgatgtactaatgtttagtcggcgaggtagatttagtttttcaggttgattcatacattttattgcttctttagttttactagtgaactgtttggatgatgaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="136964" stop="138128"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="137264" g_stop="137825" g_length="562"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="562" r_length="562" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="563" polyA_stop="573"/>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E279440" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>562</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E279440" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="137264" e_stop="137825"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAGTTAGCAAACACAAGGATGATGAGGAACATAAGGAAGAAGAGAAACAGGTTGCTGTTAAAGAGGTGGTTAAAGAGGATATAGTTAAGGGTGATCAACAGGATTTCCAATCCGAATATCCACGTTTGGCTGCATCATTTGAAAGTATGTCTGGCATGTTTACTATTTACCCAAATGGAACAAGTTTTTTGAAGGAAAAGATGAGTTTGATTGCTCCTGACAAGGCTAAAGTATTGGAGGAGAAGTGGAAGAAACTGGAGGATGATGAAGCTGCCTTGATGGTGAAGCGCTTAGATTTGATTGCGGAGCATTACAGATTGGTGGTTGATGCAATGAGAGGTAACTAGATGCTGATGGATGATGTTTCTATTTCGAACCGACAAGTTCTGATACTGTTTTGGTGGACTTTTAGATTTTGTTTCATGTAGTCTTGTTTCTCAAGGCAATTTCTTCTCGCGTTGATGTACTAATGTTTAGTCGGCGAGGTAGATTTAGTTTTTCAGGTTGATTCATACATTTTATTGCTTCTTTAGTTTTACTAGTGAACTGTTTGGATGATG</genome_strand>
        <mrna_strand>TAAAGTTAGCAAACACAAGGATGATGAGGAACATAAGGAAGAAGAGAAACAGGTTGCTGTTAAAGAGGTGGTTAAAGAGGATATAGTTAAGGGTGATCAACAGGATTTCCAATCCGAATATCCACGTTTGGCTGCATCATTTGAAAGTATGTCTGGCATGTTTACTATTTACCCAAATGGAACAAGTTTTTTGAAGGAAAAGATGAGTTTGATTGCTCCTGACAAGGCTAAAGTATTGGAGGAGAAGTGGAAGAAACTGGAGGATGATGAAGCTGCCTTGATGGTGAAGCGCTTAGATTTGATTGCGGAGCATTACAGATTGGTGGTTGATGCAATGAGAGGTAACTAGATGCTGATGGATGATGTTTCTATTTCGAACCGACAAGTTCTGATACTGTTTTGGTGGACTTTTAGATTTTGTTTCATGTAGTCTTGTTTCTCAAGGCAATTTCTTCTCGCGTTGATGTACTAATGTTTAGTCGGCGAGGTAGATTTAGTTTTTCAGGTTGATTCATACATTTTATTGCTTCTTTAGTTTTACTAGTGAACTGTTTGGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E243207" ref_strand="+" ref_description="SGN-E243207 [cLEE-2-A20]">
      <seq>aatggttcaagttttttgaaggagaagttgagtttgattgctactgacaaggctaaagagttggaggagaagtggaagaaactggaggatgatgaagctgccttgatggtgaagcgcttagatttcattgcagagcattacaaattggtggttgatgcaatgagaggtaactagatgctggtggatcatgtttttattggatgctataagttttgatactgtttcggttgagttttgcgttttgtttcatatagtcttgtttctcaagacaatttcttctcgcgttgatgtacttatgtttagtccgcgaggtagatttagtttttcaggttaattcatacatttttattgcttatctagttttactagtgaactggtttggatgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-Va1Ei/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="130444" stop="138123"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="137439" g_stop="137824" g_length="386"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="387" r_length="387" r_score="0.902"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-E243207" ref_strand="+">
        <total_alignment_score>0.902</total_alignment_score>
        <cumulative_length_of_scored_exons>386</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E243207" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="137439" e_stop="137824"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGGAACAAGTTTTTTGAAGGAAAAGATGAGTTTGATTGCTCCTGACAAGGCTAAAGTATTGGAGGAGAAGTGGAAGAAACTGGAGGATGATGAAGCTGCCTTGATGGTGAAGCGCTTAGATTTGATTGCGGAGCATTACAGATTGGTGGTTGATGCAATGAGAGGTAACTAGATGCTGATGGATGATGTTTCTATTTCGAACCGACAAGTTCTGATACTGTTTTGGTGGACTTTTAGATTTTGTTTCATGTAGTCTTGTTTCTCAAGGCAATTTCTTCTCGCGTTGATGTACTAATGTTTAGTCGGCGAGGTAGATTTAGTTTTTCAGGTTGATTCATACA-TTTTATTGCTTCTTTAGTTTTACTAGTGAACT-GTTTGGATGAT</genome_strand>
        <mrna_strand>AATGGTTCAAGTTTTTTGAAGGAGAAGTTGAGTTTGATTGCTACTGACAAGGCTAAAGAGTTGGAGGAGAAGTGGAAGAAACTGGAGGATGATGAAGCTGCCTTGATGGTGAAGCGCTTAGATTTCATTGCAGAGCATTACAAATTGGTGGTTGATGCAATGAGAGGTAACTAGATGCTGGTGGATCATGTTTTTA-TTGGATGCTATAAGTTTTGATACTGTTTCGGTTGAGTTTTGCGTTTTGTTTCATATAGTCTTGTTTCTCAAGACAATTTCTTCTCGCGTTGATGTACTTATGTTTAGTCCGCGAGGTAGATTTAGTTTTTCAGGTTAATTCATACATTTTTATTGCTTATCTAGTTTTACTAGTGAACTGGTTTGGATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>92</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="4127" PGL_stop="1262"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="4127" e_stop="3829"/>
            <exon e_start="1629" e_stop="1393"/>
            <exon e_start="1309" e_stop="1262"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.996" e_score="0.979"/>
          <exon-intron don_prob="0.982" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.979">
            <gDNA_exon_boundary e_start="4127" e_stop="3829" e_length="299"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.996">
            <gDNA_intron_boundary i_start="3828" i_stop="1630" i_length="2199"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="1629" e_stop="1393" e_length="237"/>
          </exon>
          <intron i_serial="2" don_prob="0.982" acc_prob="1.000">
            <gDNA_intron_boundary i_start="1392" i_stop="1310" i_length="83"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="1309" e_stop="1262" e_length="48"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4127" stop="3949"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245415" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4114" stop="3829"/>
              <exon start="1629" stop="1465"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E326411" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4052" stop="3829"/>
              <exon start="1629" stop="1552"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309835" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4050" stop="3829"/>
              <exon start="1629" stop="1393"/>
              <exon start="1309" stop="1262"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308055" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4041" stop="3829"/>
              <exon start="1629" stop="1446"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E263480" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4039" stop="3829"/>
              <exon start="1629" stop="1393"/>
              <exon start="1309" stop="1262"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236549" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4039" stop="3829"/>
              <exon start="1629" stop="1393"/>
              <exon start="1309" stop="1262"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241892" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4039" stop="3829"/>
              <exon start="1629" stop="1393"/>
              <exon start="1309" stop="1292"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240702" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4039" stop="3829"/>
              <exon start="1629" stop="1403"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236130" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4039" stop="3829"/>
              <exon start="1629" stop="1465"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244782" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4039" stop="3829"/>
              <exon start="1629" stop="1594"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239961" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4033" stop="3829"/>
              <exon start="1629" stop="1404"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339526" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4033" stop="3829"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228016" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4027" stop="3829"/>
              <exon start="1629" stop="1485"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E336808" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4027" stop="3829"/>
              <exon start="1629" stop="1543"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204818" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4020" stop="3829"/>
              <exon start="1629" stop="1393"/>
              <exon start="1309" stop="1262"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207008" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3973" stop="3829"/>
              <exon start="1629" stop="1393"/>
              <exon start="1309" stop="1262"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E300696" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCCTCGAAGGCTGCGATTCGCTGTCCCTATTTGTCAATTTCATATTTATTTCCATCAAAAACTTGGACTACAAAGTCACGGTGGAGACCGCCGGAAAAGCTGAAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGAATTTGATATATGATTACTACAAGTAACATGGGTGATTCCTCCAAGGACGATTTCCTTCAGCTCATCAAGCGATTCGGCGCTTTTTTGACCGTGAAGATTTCTAATATCTTCCACACACTG : GATTCAAGATCTGTGGGGGCCATAGCAGGTCTTGCAGTTGCTATAGTTTTTACCTGGAGAGTGTGGAGATCACCTAGTGGACCACAAAGGAGAATTCCTAAGCGACAAGGTACGACGCCTAGTAGTTCTGGTGTAAGCACTCATTCAAGTGCAAATGTGGAAACTTCAGGAGTTATCTCTTCTTCGGAGGATTCAAATGCTCAAAATGTTATTGATGAGTTCTTTCAGCCAGTAAAG : CCAACACTTGCACAGGTAGTTAGGCAAAGGCTGAGTGAAGGGAGGAAG</gDNA_template>
            <first_frame> S  S  K  A  A  I  R  C  P  Y  L  S  I  S  Y  L  F  P  S  K  T  W  T  T  K  S  R  W  R  P  P  E  K  L  K  A  R  F  I  G  H  R  K  L  N  R  R  R  Q  L  G  G  G  G  G  A  K  F  A  E  F  D  I  *  L  L  Q  V  T  W  V  I  P  P  R  T  I  S  F  S  S  S  S  D  S  A  L  F  *  P  *  R  F  L  I  S  S  T  H  W :   I  Q  D  L  W  G  P  *  Q  V  L  Q  L  L  *  F  L  P  G  E  C  G  D  H  L  V  D  H  K  G  E  F  L  S  D  K  V  R  R  L  V  V  L  V  *  A  L  I  Q  V  Q  M  W  K  L  Q  E  L  S  L  L  R  R  I  Q  M  L  K  M  L  L  M  S  S  F  S  Q  *  S :   Q  H  L  H  R  *  L  G  K  G  *  V  K  G  G   </first_frame>
            <second_frame>  P  R  R  L  R  F  A  V  P  I  C  Q  F  H  I  Y  F  H  Q  K  L  G  L  Q  S  H  G  G  D  R  R  K  S  *  K  L  D  S  S  V  T  G  N  S  T  D  E  D  N  *  E  E  V  E  E  P  N  L  L  N  L  I  Y  D  Y  Y  K  *  H  G  *  F  L  Q  G  R  F  P  S  A  H  Q  A  I  R  R  F  F  D  R  E  D  F  *  Y  L  P  H  T   : G  F  K  I  C  G  G  H  S  R  S  C  S  C  Y  S  F  Y  L  E  S  V  E  I  T  *  W  T  T  K  E  N  S  *  A  T  R  Y  D  A  *  *  F  W  C  K  H  S  F  K  C  K  C  G  N  F  R  S  Y  L  F  F  G  G  F  K  C  S  K  C  Y  *  *  V  L  S  A  S  K   : A  N  T  C  T  G  S  *  A  K  A  E  *  R  E  E  </second_frame>
            <third_frame>   L  E  G  C  D  S  L  S  L  F  V  N  F  I  F  I  S  I  K  N  L  D  Y  K  V  T  V  E  T  A  G  K  A  E  S  S  I  H  R  S  P  E  T  Q  P  T  K  T  T  R  R  R  W  R  S  Q  I  C  *  I  *  Y  M  I  T  T  S  N  M  G  D  S  S  K  D  D  F  L  Q  L  I  K  R  F  G  A  F  L  T  V  K  I  S  N  I  F  H  T  L  :  D  S  R  S  V  G  A  I  A  G  L  A  V  A  I  V  F  T  W  R  V  W  R  S  P  S  G  P  Q  R  R  I  P  K  R  Q  G  T  T  P  S  S  S  G  V  S  T  H  S  S  A  N  V  E  T  S  G  V  I  S  S  S  E  D  S  N  A  Q  N  V  I  D  E  F  F  Q  P  V  K  :  P  T  L  A  Q  V  V  R  Q  R  L  S  E  G  R  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3942" stop="3829"/>
                    <exon start="1629" stop="1393"/>
                    <exon start="1309" stop="1262"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>399</number_coding_nucleotides>
                  <number_encoded_amino_acids>133</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YMITTSNMGDSSKDDFLQLIKRFGAFLTVKISNIFHTLDSRSVGAIAGLAVAIVFTWRVWRSPSGPQRRIPKRQGTTPSSSGVSTHSSANVETSGVISSSEDSNAQNVIDEFFQPVKPTLAQVVRQRLSEGRK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="6395" PGL_stop="4925"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="6395" e_stop="5935"/>
            <exon e_start="5310" e_stop="4925"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.993" e_score="0.998"/>
          <exon-only e_score="0.977"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="6395" e_stop="5935" e_length="461"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.993">
            <gDNA_intron_boundary i_start="5934" i_stop="5311" i_length="624"/>
          </intron>
          <exon e_serial="2" e_score="0.977">
            <gDNA_exon_boundary e_start="5310" e_stop="4925" e_length="386"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6395" stop="5935"/>
              <exon start="5310" stop="4925"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733157" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6356" stop="5935"/>
              <exon start="5310" stop="5051"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E477368" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6348" stop="5935"/>
              <exon start="5310" stop="4969"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548374" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6347" stop="6188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287443" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6298" stop="5935"/>
              <exon start="5310" stop="4959"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540370" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAAACATCAGTTCCATTAATTTAGATGCTTCACGAGGGTGGCAGTGACGAATTCCACCGCCGGCCGGACCCGAGCGCGGACGATGTAGCCACCCCTCGGGTCCTAACCATCTTGTCGTATGTGCTCGAAAAGCTCGTAGCAAGGAATGATCAATTGTTATTATTAGGCCGCCAGGTTGGTCATGATAATGAACTCATGAGCAACGGGGCAGGCGGCCCACGGAGGGTACTAGGGAAGAATTTTAATGCGTTTCATGGGGTTCGAGCGCCGAATATAAGTATACCCAAGTATTTAGAGAGGTTATATAAGTATACGAATTGTAGCCCGTCTTGTTTTGTGGTGGGATATGTGTATATTGATAGATTGGGGCATAAGTATCCAGATTCTCTATTGGTTTCTTTGAATGTGCATAGGCTGCTTGTTACTAGTGTTATGGTTGCTTCCAAAATGCTCGATGATGC : ACACTATAACAATGCATTCTATGCCCGAGTTGGAGGAGTAAGCAATGCGGAATTAAACAAGTTGGAGTTGGAGCTACTTTTCTTGTTAGATTTTGGAGTAAATATGAGTGCACGAGTTTTCGAAAGTTATTGCCAGTATTTGGAGAGGGAAATGTTGAGCAATGGACCAACCCTCAAGATTGAAAAGTCAGCTATTAATAGCATTACTACTAGTACTGTAGATGATGCCACTGAAATTTCAGTAGAAGACATTGATCATACTTCTTCACCATCACAATTGTTAGATTAAATTTACGTGACAACAATAAATTCTAATGAAATTATTCAATAAAATGTAAAAGTACTTGTCTCTATGTTACTCTTTCTATATTCGTATAGCTGATCTT</gDNA_template>
            <first_frame> Q  T  S  V  P  L  I  *  M  L  H  E  G  G  S  D  E  F  H  R  R  P  D  P  S  A  D  D  V  A  T  P  R  V  L  T  I  L  S  Y  V  L  E  K  L  V  A  R  N  D  Q  L  L  L  L  G  R  Q  V  G  H  D  N  E  L  M  S  N  G  A  G  G  P  R  R  V  L  G  K  N  F  N  A  F  H  G  V  R  A  P  N  I  S  I  P  K  Y  L  E  R  L  Y  K  Y  T  N  C  S  P  S  C  F  V  V  G  Y  V  Y  I  D  R  L  G  H  K  Y  P  D  S  L  L  V  S  L  N  V  H  R  L  L  V  T  S  V  M  V  A  S  K  M  L  D  D  A :   H  Y  N  N  A  F  Y  A  R  V  G  G  V  S  N  A  E  L  N  K  L  E  L  E  L  L  F  L  L  D  F  G  V  N  M  S  A  R  V  F  E  S  Y  C  Q  Y  L  E  R  E  M  L  S  N  G  P  T  L  K  I  E  K  S  A  I  N  S  I  T  T  S  T  V  D  D  A  T  E  I  S  V  E  D  I  D  H  T  S  S  P  S  Q  L  L  D  *  I  Y  V  T  T  I  N  S  N  E  I  I  Q  *  N  V  K  V  L  V  S  M  L  L  F  L  Y  S  Y  S  *  S  </first_frame>
            <second_frame>  K  H  Q  F  H  *  F  R  C  F  T  R  V  A  V  T  N  S  T  A  G  R  T  R  A  R  T  M  *  P  P  L  G  S  *  P  S  C  R  M  C  S  K  S  S  *  Q  G  M  I  N  C  Y  Y  *  A  A  R  L  V  M  I  M  N  S  *  A  T  G  Q  A  A  H  G  G  Y  *  G  R  I  L  M  R  F  M  G  F  E  R  R  I  *  V  Y  P  S  I  *  R  G  Y  I  S  I  R  I  V  A  R  L  V  L  W  W  D  M  C  I  L  I  D  W  G  I  S  I  Q  I  L  Y  W  F  L  *  M  C  I  G  C  L  L  L  V  L  W  L  L  P  K  C  S  M  M   : H  T  I  T  M  H  S  M  P  E  L  E  E  *  A  M  R  N  *  T  S  W  S  W  S  Y  F  S  C  *  I  L  E  *  I  *  V  H  E  F  S  K  V  I  A  S  I  W  R  G  K  C  *  A  M  D  Q  P  S  R  L  K  S  Q  L  L  I  A  L  L  L  V  L  *  M  M  P  L  K  F  Q  *  K  T  L  I  I  L  L  H  H  H  N  C  *  I  K  F  T  *  Q  Q  *  I  L  M  K  L  F  N  K  M  *  K  Y  L  S  L  C  Y  S  F  Y  I  R  I  A  D  L </second_frame>
            <third_frame>   N  I  S  S  I  N  L  D  A  S  R  G  W  Q  *  R  I  P  P  P  A  G  P  E  R  G  R  C  S  H  P  S  G  P  N  H  L  V  V  C  A  R  K  A  R  S  K  E  *  S  I  V  I  I  R  P  P  G  W  S  *  *  *  T  H  E  Q  R  G  R  R  P  T  E  G  T  R  E  E  F  *  C  V  S  W  G  S  S  A  E  Y  K  Y  T  Q  V  F  R  E  V  I  *  V  Y  E  L  *  P  V  L  F  C  G  G  I  C  V  Y  *  *  I  G  A  *  V  S  R  F  S  I  G  F  F  E  C  A  *  A  A  C  Y  *  C  Y  G  C  F  Q  N  A  R  *  C  :  T  L  *  Q  C  I  L  C  P  S  W  R  S  K  Q  C  G  I  K  Q  V  G  V  G  A  T  F  L  V  R  F  W  S  K  Y  E  C  T  S  F  R  K  L  L  P  V  F  G  E  G  N  V  E  Q  W  T  N  P  Q  D  *  K  V  S  Y  *  *  H  Y  Y  *  Y  C  R  *  C  H  *  N  F  S  R  R  H  *  S  Y  F  F  T  I  T  I  V  R  L  N  L  R  D  N  N  K  F  *  *  N  Y  S  I  K  C  K  S  T  C  L  Y  V  T  L  S  I  F  V  *  L  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="6371" stop="5935"/>
                    <exon start="5310" stop="5022"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>723</number_coding_nucleotides>
                  <number_encoded_amino_acids>241</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MLHEGGSDEFHRRPDPSADDVATPRVLTILSYVLEKLVARNDQLLLLGRQVGHDNELMSNGAGGPRRVLGKNFNAFHGVRAPNISIPKYLERLYKYTNCSPSCFVVGYVYIDRLGHKYPDSLLVSLNVHRLLVTSVMVASKMLDDAHYNNAFYARVGGVSNAELNKLELELLFLLDFGVNMSARVFESYCQYLEREMLSNGPTLKIEKSAINSITTSTVDDATEISVEDIDHTSSPSQLLD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="13663" PGL_stop="13173"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="13663" e_stop="13173"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.941"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.941">
            <gDNA_exon_boundary e_start="13663" e_stop="13173" e_length="491"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13663" stop="13173"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E623731" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCAAATTACAAACAAAAGTTAAAGATGTGTAGTGGAAGAAGAGAGGGTGACGAAAAAACTTCATCAACTTCATATTGCAAAGGGCCTTCGAAAGAGGGAGAATCGATAATTAGCTCTGCAATTACTTGTGCGCTCTGTAGTTCAGAGGCCTCTGTTTATTGTGAAGCTGATAATGCTTTTCTTTGCCGGAAATGTGATAGATCGGTTCACGGAGCTAATTTTTTGGCTCAGAGACATATAAGGTGCCTTCTTTGCAGCGTTTGCCGGAAAACAACGCGGCGGTTTCTGATCGGAACTTCGTCGGAGCTGATTTTGCCGACGATTGCCCGTTTGGAACAGAGAAACAGAAGCAGAAGTGCAGAGTCTGAGACGACGGACTACAGAACGACGCCGCAAGAGCTTTTTCTGTTTATTTGATATTTAATTATGTTTTGATTTTTTTTTGTTTAATTCCATTACTGGATGATGCATTTAATTTAAATTAATTAAGT</gDNA_template>
            <first_frame> S  N  Y  K  Q  K  L  K  M  C  S  G  R  R  E  G  D  E  K  T  S  S  T  S  Y  C  K  G  P  S  K  E  G  E  S  I  I  S  S  A  I  T  C  A  L  C  S  S  E  A  S  V  Y  C  E  A  D  N  A  F  L  C  R  K  C  D  R  S  V  H  G  A  N  F  L  A  Q  R  H  I  R  C  L  L  C  S  V  C  R  K  T  T  R  R  F  L  I  G  T  S  S  E  L  I  L  P  T  I  A  R  L  E  Q  R  N  R  S  R  S  A  E  S  E  T  T  D  Y  R  T  T  P  Q  E  L  F  L  F  I  *  Y  L  I  M  F  *  F  F  F  V  *  F  H  Y  W  M  M  H  L  I  *  I  N  *   </first_frame>
            <second_frame>  Q  I  T  N  K  S  *  R  C  V  V  E  E  E  R  V  T  K  K  L  H  Q  L  H  I  A  K  G  L  R  K  R  E  N  R  *  L  A  L  Q  L  L  V  R  S  V  V  Q  R  P  L  F  I  V  K  L  I  M  L  F  F  A  G  N  V  I  D  R  F  T  E  L  I  F  W  L  R  D  I  *  G  A  F  F  A  A  F  A  G  K  Q  R  G  G  F  *  S  E  L  R  R  S  *  F  C  R  R  L  P  V  W  N  R  E  T  E  A  E  V  Q  S  L  R  R  R  T  T  E  R  R  R  K  S  F  F  C  L  F  D  I  *  L  C  F  D  F  F  L  F  N  S  I  T  G  *  C  I  *  F  K  L  I  K  </second_frame>
            <third_frame>   K  L  Q  T  K  V  K  D  V  *  W  K  K  R  G  *  R  K  N  F  I  N  F  I  L  Q  R  A  F  E  R  G  R  I  D  N  *  L  C  N  Y  L  C  A  L  *  F  R  G  L  C  L  L  *  S  *  *  C  F  S  L  P  E  M  *  *  I  G  S  R  S  *  F  F  G  S  E  T  Y  K  V  P  S  L  Q  R  L  P  E  N  N  A  A  V  S  D  R  N  F  V  G  A  D  F  A  D  D  C  P  F  G  T  E  K  Q  K  Q  K  C  R  V  *  D  D  G  L  Q  N  D  A  A  R  A  F  S  V  Y  L  I  F  N  Y  V  L  I  F  F  C  L  I  P  L  L  D  D  A  F  N  L  N  *  L  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="13663" stop="13247"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>414</number_coding_nucleotides>
                  <number_encoded_amino_acids>138</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SNYKQKLKMCSGRREGDEKTSSTSYCKGPSKEGESIISSAITCALCSSEASVYCEADNAFLCRKCDRSVHGANFLAQRHIRCLLCSVCRKTTRRFLIGTSSELILPTIARLEQRNRSRSAESETTDYRTTPQELFLFI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="29584" PGL_stop="33929"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="29584" e_stop="30471"/>
            <exon e_start="31330" e_stop="31860"/>
            <exon e_start="31994" e_stop="32215"/>
            <exon e_start="33565" e_stop="33929"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.951" acc_prob="0.997" e_score="0.999"/>
          <exon-intron don_prob="0.957" acc_prob="0.863" e_score="1.000"/>
          <exon-intron don_prob="0.901" acc_prob="0.623" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="29584" e_stop="30471" e_length="888"/>
          </exon>
          <intron i_serial="1" don_prob="0.951" acc_prob="0.997">
            <gDNA_intron_boundary i_start="30472" i_stop="31329" i_length="858"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="31330" e_stop="31860" e_length="531"/>
          </exon>
          <intron i_serial="2" don_prob="0.957" acc_prob="0.863">
            <gDNA_intron_boundary i_start="31861" i_stop="31993" i_length="133"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="31994" e_stop="32215" e_length="222"/>
          </exon>
          <intron i_serial="3" don_prob="0.901" acc_prob="0.623">
            <gDNA_intron_boundary i_start="32216" i_stop="33564" i_length="1349"/>
          </intron>
          <exon e_serial="4" e_score="0.997">
            <gDNA_exon_boundary e_start="33565" e_stop="33929" e_length="365"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29584" stop="30471"/>
              <exon start="31330" stop="31860"/>
              <exon start="31994" stop="32215"/>
              <exon start="33565" stop="33906"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745673" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29590" stop="30306"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E481347" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29590" stop="30194"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E428891" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29687" stop="30199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317093" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29715" stop="30179"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341575" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30172" stop="30471"/>
              <exon start="31330" stop="31533"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341639" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30281" stop="30471"/>
              <exon start="31330" stop="31736"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327792" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30281" stop="30471"/>
              <exon start="31330" stop="31608"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327391" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32038" stop="32215"/>
              <exon start="33565" stop="33929"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E428892" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAGAACCAAAAACTGAGATCTGCTCACAATACAGTTCGATTTCCATAGTTACAATCATCACTATCATAATTTTCTCCATGTTTAGTTCATCCAACACAGTAGAAATGCCTATGGTTCCAAGATTCATTCATACACAAAATCGTCTCAAAGATCTTCTCTTAATCTTCTCCACACTTGTTATCTTCTACCTCATCTTCCTTCTTCATCACATCCAGACCCCCAAAACTTCCTTCAATCCAAATCCCAATTTCTCCAAAACCCTTTCAACTTCCACTAATCTTTCAATCTCACACCTCTTCTTCTCAATTGCCGCTTCTTCTTCCTCTTTCTCTAACCGTCTCTCTTACATTAACCTCTGGTACAAACCCAATTCCACAAACGCCGTCGTTTTCCTTGACGACCCGATTTCCATTTCTACCCTCTCTGTTTCATCACCCCCAATTCTTGTTTCATCGGATACTTCTAAGTTTCCTTATTCATTCCCGGCGGGCCGTCGTTCGGCGATTCGGATTGCTCGTATTGTTAAAGATACTTTTGATTTGGTTAAAAATGTGAACTTTAATGATACCCGTTGGTTTGTTTTTGGGGATGATGATACTGTTTTCTTTACGGATAATTTGGTTAGAGTTTTGTCGAAATATGATTGTGAGAAGTGGTATTATGTTGGGTATAATTCGGAGAGTTTTGAGCAAAATGAGAAGTATTCATTTGATATGGCATTTGGAGGGGGTGGGTTTGCACTTAGTGCTCCATTGGCTAAGGTTTTAGCTAGGGTTTTGGATTCTTGTTTGATTAGGTACCCTCATTTGTATGGAAGTGATTCCAGGATTTTTTCTTGTGTAGCTGAGCTCGGAGTACATTTGACTCATGAACCTGGATTCCACCAG : GTTGATGTCCGAGGAAATCTGTTTGGTATCCTTGCTGCACATCCATTATCACCTTTGTTATCACTTCATCACTTGGACGTCGTGGAGCCACTTTTTCCTGGCATGACTAGGATTCAAGCAGTGGACCATCTTTTCCAAGCTGTCCATGCTGATCCAGCTAGGATTTTGGAACAAACTGTGTGCTATGACAAGTCCAATTTACTGACCGTTTCAGTTGCATGGGGTTATGCCGTTCAGGTGTTTGAAGGGAATCAACTTCTTCCAGATCTTCTCTCGCTGCAGCGAACATTTACACCATGGAAAAGGGGTAAAAATGTTTCTGCAAGCTATATGCTCAACACTAGAGTCAATCCTAGTGATCCATGCAAAAAACCTGATGTCTTCTTCTTGAAAAAGGTGCTTTCTAGTATAGATGGCGTATGGACTGAGTATACAAGACACAGTGTTGGGAAGTGTGTTAGAAAAAATCCTACAAAAAAGTTGGTAAATATAAGGGTCTTCTCGCAGAAGTTAGACTTCGATGTTGAACAG : TTGAAGGCACCTCGCCGACCATGCTGTGACATTTCAGCACCTATCAATGAGACGATGATAGTTGGTATTAGACAATGTGGGCATGATGAGTTGATCTCAATGCAGACTTAAATGATACTTAAAATTGCTCGACAAACGGCCTGTCAATCCATGGTTTGGACGAGCGGAGGGTTATGCAGTCTCTTGATAGAACTCTCTCTTCCGATTTCTGAATTTTATAAG : ATTTATGCGATTGTTACTCTTACCTCCTGTATTACTAAGGAACTCTTGTAGGAGGGTGTCGTGTGTTGCATCTCTTCTGGAAAGAGTAGTAATCACTCTTTTGAAACCTTGGTTGCTCGTCGATTCCATGGATCTCGTGGCAAAAGCAAGGTCTGTGCTTATAATTTCTCTGGGTGTATTCCGCCATACCACGGATTGAAGTTAATATTGTTGTGTTTTTATGAACTATGATTAGTTTAATTTTTGTGATTTTTTTACTGGAGAAAGATGAGCCTAGACAGGCCTCAGGAAAGTTTAGTAAGGTGGCATATATTAATTCACCAGAAATGTAGATTAACCCAGATCAAACTGTGGTTTTGAAAACA</gDNA_template>
            <first_frame> R  E  P  K  T  E  I  C  S  Q  Y  S  S  I  S  I  V  T  I  I  T  I  I  I  F  S  M  F  S  S  S  N  T  V  E  M  P  M  V  P  R  F  I  H  T  Q  N  R  L  K  D  L  L  L  I  F  S  T  L  V  I  F  Y  L  I  F  L  L  H  H  I  Q  T  P  K  T  S  F  N  P  N  P  N  F  S  K  T  L  S  T  S  T  N  L  S  I  S  H  L  F  F  S  I  A  A  S  S  S  S  F  S  N  R  L  S  Y  I  N  L  W  Y  K  P  N  S  T  N  A  V  V  F  L  D  D  P  I  S  I  S  T  L  S  V  S  S  P  P  I  L  V  S  S  D  T  S  K  F  P  Y  S  F  P  A  G  R  R  S  A  I  R  I  A  R  I  V  K  D  T  F  D  L  V  K  N  V  N  F  N  D  T  R  W  F  V  F  G  D  D  D  T  V  F  F  T  D  N  L  V  R  V  L  S  K  Y  D  C  E  K  W  Y  Y  V  G  Y  N  S  E  S  F  E  Q  N  E  K  Y  S  F  D  M  A  F  G  G  G  G  F  A  L  S  A  P  L  A  K  V  L  A  R  V  L  D  S  C  L  I  R  Y  P  H  L  Y  G  S  D  S  R  I  F  S  C  V  A  E  L  G  V  H  L  T  H  E  P  G  F  H  Q  :  V  D  V  R  G  N  L  F  G  I  L  A  A  H  P  L  S  P  L  L  S  L  H  H  L  D  V  V  E  P  L  F  P  G  M  T  R  I  Q  A  V  D  H  L  F  Q  A  V  H  A  D  P  A  R  I  L  E  Q  T  V  C  Y  D  K  S  N  L  L  T  V  S  V  A  W  G  Y  A  V  Q  V  F  E  G  N  Q  L  L  P  D  L  L  S  L  Q  R  T  F  T  P  W  K  R  G  K  N  V  S  A  S  Y  M  L  N  T  R  V  N  P  S  D  P  C  K  K  P  D  V  F  F  L  K  K  V  L  S  S  I  D  G  V  W  T  E  Y  T  R  H  S  V  G  K  C  V  R  K  N  P  T  K  K  L  V  N  I  R  V  F  S  Q  K  L  D  F  D  V  E  Q  :  L  K  A  P  R  R  P  C  C  D  I  S  A  P  I  N  E  T  M  I  V  G  I  R  Q  C  G  H  D  E  L  I  S  M  Q  T  *  M  I  L  K  I  A  R  Q  T  A  C  Q  S  M  V  W  T  S  G  G  L  C  S  L  L  I  E  L  S  L  P  I  S  E  F  Y  K  :  I  Y  A  I  V  T  L  T  S  C  I  T  K  E  L  L  *  E  G  V  V  C  C  I  S  S  G  K  S  S  N  H  S  F  E  T  L  V  A  R  R  F  H  G  S  R  G  K  S  K  V  C  A  Y  N  F  S  G  C  I  P  P  Y  H  G  L  K  L  I  L  L  C  F  Y  E  L  *  L  V  *  F  L  *  F  F  Y  W  R  K  M  S  L  D  R  P  Q  E  S  L  V  R  W  H  I  L  I  H  Q  K  C  R  L  T  Q  I  K  L  W  F  *  K   </first_frame>
            <second_frame>  E  N  Q  K  L  R  S  A  H  N  T  V  R  F  P  *  L  Q  S  S  L  S  *  F  S  P  C  L  V  H  P  T  Q  *  K  C  L  W  F  Q  D  S  F  I  H  K  I  V  S  K  I  F  S  *  S  S  P  H  L  L  S  S  T  S  S  S  F  F  I  T  S  R  P  P  K  L  P  S  I  Q  I  P  I  S  P  K  P  F  Q  L  P  L  I  F  Q  S  H  T  S  S  S  Q  L  P  L  L  L  P  L  S  L  T  V  S  L  T  L  T  S  G  T  N  P  I  P  Q  T  P  S  F  S  L  T  T  R  F  P  F  L  P  S  L  F  H  H  P  Q  F  L  F  H  R  I  L  L  S  F  L  I  H  S  R  R  A  V  V  R  R  F  G  L  L  V  L  L  K  I  L  L  I  W  L  K  M  *  T  L  M  I  P  V  G  L  F  L  G  M  M  I  L  F  S  L  R  I  I  W  L  E  F  C  R  N  M  I  V  R  S  G  I  M  L  G  I  I  R  R  V  L  S  K  M  R  S  I  H  L  I  W  H  L  E  G  V  G  L  H  L  V  L  H  W  L  R  F  *  L  G  F  W  I  L  V  *  L  G  T  L  I  C  M  E  V  I  P  G  F  F  L  V  *  L  S  S  E  Y  I  *  L  M  N  L  D  S  T  R :   L  M  S  E  E  I  C  L  V  S  L  L  H  I  H  Y  H  L  C  Y  H  F  I  T  W  T  S  W  S  H  F  F  L  A  *  L  G  F  K  Q  W  T  I  F  S  K  L  S  M  L  I  Q  L  G  F  W  N  K  L  C  A  M  T  S  P  I  Y  *  P  F  Q  L  H  G  V  M  P  F  R  C  L  K  G  I  N  F  F  Q  I  F  S  R  C  S  E  H  L  H  H  G  K  G  V  K  M  F  L  Q  A  I  C  S  T  L  E  S  I  L  V  I  H  A  K  N  L  M  S  S  S  *  K  R  C  F  L  V  *  M  A  Y  G  L  S  I  Q  D  T  V  L  G  S  V  L  E  K  I  L  Q  K  S  W  *  I  *  G  S  S  R  R  S  *  T  S  M  L  N  S :   *  R  H  L  A  D  H  A  V  T  F  Q  H  L  S  M  R  R  *  *  L  V  L  D  N  V  G  M  M  S  *  S  Q  C  R  L  K  *  Y  L  K  L  L  D  K  R  P  V  N  P  W  F  G  R  A  E  G  Y  A  V  S  *  *  N  S  L  F  R  F  L  N  F  I  R :   F  M  R  L  L  L  L  P  P  V  L  L  R  N  S  C  R  R  V  S  C  V  A  S  L  L  E  R  V  V  I  T  L  L  K  P  W  L  L  V  D  S  M  D  L  V  A  K  A  R  S  V  L  I  I  S  L  G  V  F  R  H  T  T  D  *  S  *  Y  C  C  V  F  M  N  Y  D  *  F  N  F  C  D  F  F  T  G  E  R  *  A  *  T  G  L  R  K  V  *  *  G  G  I  Y  *  F  T  R  N  V  D  *  P  R  S  N  C  G  F  E  N  </second_frame>
            <third_frame>   R  T  K  N  *  D  L  L  T  I  Q  F  D  F  H  S  Y  N  H  H  Y  H  N  F  L  H  V  *  F  I  Q  H  S  R  N  A  Y  G  S  K  I  H  S  Y  T  K  S  S  Q  R  S  S  L  N  L  L  H  T  C  Y  L  L  P  H  L  P  S  S  S  H  P  D  P  Q  N  F  L  Q  S  K  S  Q  F  L  Q  N  P  F  N  F  H  *  S  F  N  L  T  P  L  L  L  N  C  R  F  F  F  L  F  L  *  P  S  L  L  H  *  P  L  V  Q  T  Q  F  H  K  R  R  R  F  P  *  R  P  D  F  H  F  Y  P  L  C  F  I  T  P  N  S  C  F  I  G  Y  F  *  V  S  L  F  I  P  G  G  P  S  F  G  D  S  D  C  S  Y  C  *  R  Y  F  *  F  G  *  K  C  E  L  *  *  Y  P  L  V  C  F  W  G  *  *  Y  C  F  L  Y  G  *  F  G  *  S  F  V  E  I  *  L  *  E  V  V  L  C  W  V  *  F  G  E  F  *  A  K  *  E  V  F  I  *  Y  G  I  W  R  G  W  V  C  T  *  C  S  I  G  *  G  F  S  *  G  F  G  F  L  F  D  *  V  P  S  F  V  W  K  *  F  Q  D  F  F  L  C  S  *  A  R  S  T  F  D  S  *  T  W  I  P  P   : G  *  C  P  R  K  S  V  W  Y  P  C  C  T  S  I  I  T  F  V  I  T  S  S  L  G  R  R  G  A  T  F  S  W  H  D  *  D  S  S  S  G  P  S  F  P  S  C  P  C  *  S  S  *  D  F  G  T  N  C  V  L  *  Q  V  Q  F  T  D  R  F  S  C  M  G  L  C  R  S  G  V  *  R  E  S  T  S  S  R  S  S  L  A  A  A  N  I  Y  T  M  E  K  G  *  K  C  F  C  K  L  Y  A  Q  H  *  S  Q  S  *  *  S  M  Q  K  T  *  C  L  L  L  E  K  G  A  F  *  Y  R  W  R  M  D  *  V  Y  K  T  Q  C  W  E  V  C  *  K  K  S  Y  K  K  V  G  K  Y  K  G  L  L  A  E  V  R  L  R  C  *  T   : V  E  G  T  S  P  T  M  L  *  H  F  S  T  Y  Q  *  D  D  D  S  W  Y  *  T  M  W  A  *  *  V  D  L  N  A  D  L  N  D  T  *  N  C  S  T  N  G  L  S  I  H  G  L  D  E  R  R  V  M  Q  S  L  D  R  T  L  S  S  D  F  *  I  L  *   : D  L  C  D  C  Y  S  Y  L  L  Y  Y  *  G  T  L  V  G  G  C  R  V  L  H  L  F  W  K  E  *  *  S  L  F  *  N  L  G  C  S  S  I  P  W  I  S  W  Q  K  Q  G  L  C  L  *  F  L  W  V  Y  S  A  I  P  R  I  E  V  N  I  V  V  F  L  *  T  M  I  S  L  I  F  V  I  F  L  L  E  K  D  E  P  R  Q  A  S  G  K  F  S  K  V  A  Y  I  N  S  P  E  M  *  I  N  P  D  Q  T  V  V  L  K  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29584" stop="30471"/>
                    <exon start="31330" stop="31860"/>
                    <exon start="31994" stop="32104"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1527</number_coding_nucleotides>
                  <number_encoded_amino_acids>509</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>REPKTEICSQYSSISIVTIITIIIFSMFSSSNTVEMPMVPRFIHTQNRLKDLLLIFSTLVIFYLIFLLHHIQTPKTSFNPNPNFSKTLSTSTNLSISHLFFSIAASSSSFSNRLSYINLWYKPNSTNAVVFLDDPISISTLSVSSPPILVSSDTSKFPYSFPAGRRSAIRIARIVKDTFDLVKNVNFNDTRWFVFGDDDTVFFTDNLVRVLSKYDCEKWYYVGYNSESFEQNEKYSFDMAFGGGGFALSAPLAKVLARVLDSCLIRYPHLYGSDSRIFSCVAELGVHLTHEPGFHQVDVRGNLFGILAAHPLSPLLSLHHLDVVEPLFPGMTRIQAVDHLFQAVHADPARILEQTVCYDKSNLLTVSVAWGYAVQVFEGNQLLPDLLSLQRTFTPWKRGKNVSASYMLNTRVNPSDPCKKPDVFFLKKVLSSIDGVWTEYTRHSVGKCVRKNPTKKLVNIRVFSQKLDFDVEQLKAPRRPCCDISAPINETMIVGIRQCGHDELISMQT*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="32184" stop="32215"/>
                    <exon start="33565" stop="33763"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NSLFRFLNFIRFMRLLLLPPVLLRNSCRRVSCVASLLERVVITLLKPWLLVDSMDLVAKARSVLIISLGVFRHTTD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="40729" PGL_stop="41171"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="40729" e_stop="41171"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.935"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.935">
            <gDNA_exon_boundary e_start="40729" e_stop="41171" e_length="443"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40729" stop="41171"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243215" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTATTGTAGATGACCAAATTTTTTCTTCGAATACGAAATTAAATTACAATATACACACAAAAAATAGTTTATTTTTTTTTATTTAAACTAAGGAATGAAAGAAAAAAAACAAAATAAGAATAAGAAACTCAAATAATTATAATAAAAGAAGTCAAAAAATAATTTTTGTATGAAAAAAATTAAAATATACCTTGAACTTTGATAGAAGAATCATATATACCCCTAAATAATTTTTTTTTTAAAAATAGAAGTAACAAATATAAATTTAAAACTAATTTTTTAACTTCCGTTAAATGAAGGGTATATGTGAGCCATTTTGTAACGGCAGGGGTATATGTGAGCCGTTTGTATAACGATAAGGGCATATATGAGCCACTTTTATAACGAGGGGTATATCAGCTCTAAATGACAAAGTTGAGGAGTACATCAGACCCTTTTATTTA</gDNA_template>
            <first_frame> L  L  *  M  T  K  F  F  L  R  I  R  N  *  I  T  I  Y  T  Q  K  I  V  Y  F  F  L  F  K  L  R  N  E  R  K  K  T  K  *  E  *  E  T  Q  I  I  I  I  K  E  V  K  K  *  F  L  Y  E  K  N  *  N  I  P  *  T  L  I  E  E  S  Y  I  P  L  N  N  F  F  F  K  N  R  S  N  K  Y  K  F  K  T  N  F  L  T  S  V  K  *  R  V  Y  V  S  H  F  V  T  A  G  V  Y  V  S  R  L  Y  N  D  K  G  I  Y  E  P  L  L  *  R  G  V  Y  Q  L  *  M  T  K  L  R  S  T  S  D  P  F  I   </first_frame>
            <second_frame>  Y  C  R  *  P  N  F  F  F  E  Y  E  I  K  L  Q  Y  T  H  K  K  *  F  I  F  F  Y  L  N  *  G  M  K  E  K  K  Q  N  K  N  K  K  L  K  *  L  *  *  K  K  S  K  N  N  F  C  M  K  K  I  K  I  Y  L  E  L  *  *  K  N  H  I  Y  P  *  I  I  F  F  L  K  I  E  V  T  N  I  N  L  K  L  I  F  *  L  P  L  N  E  G  Y  M  *  A  I  L  *  R  Q  G  Y  M  *  A  V  C  I  T  I  R  A  Y  M  S  H  F  Y  N  E  G  Y  I  S  S  K  *  Q  S  *  G  V  H  Q  T  L  L  F  </second_frame>
            <third_frame>   I  V  D  D  Q  I  F  S  S  N  T  K  L  N  Y  N  I  H  T  K  N  S  L  F  F  F  I  *  T  K  E  *  K  K  K  N  K  I  R  I  R  N  S  N  N  Y  N  K  R  S  Q  K  I  I  F  V  *  K  K  L  K  Y  T  L  N  F  D  R  R  I  I  Y  T  P  K  *  F  F  F  *  K  *  K  *  Q  I  *  I  *  N  *  F  F  N  F  R  *  M  K  G  I  C  E  P  F  C  N  G  R  G  I  C  E  P  F  V  *  R  *  G  H  I  *  A  T  F  I  T  R  G  I  S  A  L  N  D  K  V  E  E  Y  I  R  P  F  Y  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07SLm0137M12.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="42326" PGL_stop="43065"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="42326" e_stop="42483"/>
            <exon e_start="42569" e_stop="42845"/>
            <exon e_start="42882" e_stop="43065"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.392" acc_prob="0.871" e_score="0.956"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.968"/>
          <exon-only e_score="0.984"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.956">
            <gDNA_exon_boundary e_start="42326" e_stop="42483" e_length="158"/>
          </exon>
          <intron i_serial="1" don_prob="0.392" acc_prob="0.871">
            <gDNA_intron_boundary i_start="42484" i_stop="42568" i_length="85"/>
          </intron>
          <exon e_serial="2" e_score="0.968">
            <gDNA_exon_boundary e_start="42569" e_stop="42845" e_length="277"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="42846" i_stop="42881" i_length="36"/>
          </intron>
          <exon e_serial="3" e_score="0.984">
            <gDNA_exon_boundary e_start="42882" e_stop="43065" e_length="184"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42326" stop="42483"/>
              <exon start="42569" stop="42845"/>
              <exon start="42882" stop="43065"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E457642" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCTAAGAATGTTGATGAGCTTGGCTGCTATAACCATGCTGCTTGGTTCAGCCATGGCAACAAATTACACAGTGGGAAGTCCTAATGGTGGATGGGACCAATCTACTGATGTTCAAGCATGGGCTGCATCGAAAACTTTCTTCGTCGGAGATAATCTGA : TTTTTTCATATTCTCTGAGCCATTCTGTGCTAGAAGTCACAAAGGCTGGTTTTGAGACCTGCCAGATTACAGCTCCTATTGCAATTTATACTGGAGGGATGACAGTAATCACTCTAGCTTCTGTAGGCAAGAAATACTTTATATGTGGAACTGGTGGACATTGTAATGTAGGAGGAATGAAACTCGAAATCAACACTCTTCCCAAGGCTACCCCACCCCCACCTCCACCAGCCAAACCGGTTACTCCACCAACACCAACCCCAAAAGCTCCACCACC : ACCAACTCCCATGACTAAACCCCCAGTTGCTTCCCCTCCCTCTTTATCGCCATCTCCCAAGTCTTCATCAGCACCCTCACCCAGAAACATACATAAAATTTCCCCTGCAATGTCACCTTCCAAGTCCTCCCATGCTCACAGCCCAGCCATGCCTCCTACTGCCGTTCCAACATCCCCTTCTGTT</gDNA_template>
            <first_frame> A  K  N  V  D  E  L  G  C  Y  N  H  A  A  W  F  S  H  G  N  K  L  H  S  G  K  S  *  W  W  M  G  P  I  Y  *  C  S  S  M  G  C  I  E  N  F  L  R  R  R  *  S  D :   F  F  I  F  S  E  P  F  C  A  R  S  H  K  G  W  F  *  D  L  P  D  Y  S  S  Y  C  N  L  Y  W  R  D  D  S  N  H  S  S  F  C  R  Q  E  I  L  Y  M  W  N  W  W  T  L  *  C  R  R  N  E  T  R  N  Q  H  S  S  Q  G  Y  P  T  P  T  S  T  S  Q  T  G  Y  S  T  N  T  N  P  K  S  S  T  T  :  T  N  S  H  D  *  T  P  S  C  F  P  S  L  F  I  A  I  S  Q  V  F  I  S  T  L  T  Q  K  H  T  *  N  F  P  C  N  V  T  F  Q  V  L  P  C  S  Q  P  S  H  A  S  Y  C  R  S  N  I  P  F  C  </first_frame>
            <second_frame>  L  R  M  L  M  S  L  A  A  I  T  M  L  L  G  S  A  M  A  T  N  Y  T  V  G  S  P  N  G  G  W  D  Q  S  T  D  V  Q  A  W  A  A  S  K  T  F  F  V  G  D  N  L   : I  F  S  Y  S  L  S  H  S  V  L  E  V  T  K  A  G  F  E  T  C  Q  I  T  A  P  I  A  I  Y  T  G  G  M  T  V  I  T  L  A  S  V  G  K  K  Y  F  I  C  G  T  G  G  H  C  N  V  G  G  M  K  L  E  I  N  T  L  P  K  A  T  P  P  P  P  P  P  A  K  P  V  T  P  P  T  P  T  P  K  A  P  P  P :   P  T  P  M  T  K  P  P  V  A  S  P  P  S  L  S  P  S  P  K  S  S  S  A  P  S  P  R  N  I  H  K  I  S  P  A  M  S  P  S  K  S  S  H  A  H  S  P  A  M  P  P  T  A  V  P  T  S  P  S  V </second_frame>
            <third_frame>   *  E  C  *  *  A  W  L  L  *  P  C  C  L  V  Q  P  W  Q  Q  I  T  Q  W  E  V  L  M  V  D  G  T  N  L  L  M  F  K  H  G  L  H  R  K  L  S  S  S  E  I  I  *  :  F  F  H  I  L  *  A  I  L  C  *  K  S  Q  R  L  V  L  R  P  A  R  L  Q  L  L  L  Q  F  I  L  E  G  *  Q  *  S  L  *  L  L  *  A  R  N  T  L  Y  V  E  L  V  D  I  V  M  *  E  E  *  N  S  K  S  T  L  F  P  R  L  P  H  P  H  L  H  Q  P  N  R  L  L  H  Q  H  Q  P  Q  K  L  H  H   : H  Q  L  P  *  L  N  P  Q  L  L  P  L  P  L  Y  R  H  L  P  S  L  H  Q  H  P  H  P  E  T  Y  I  K  F  P  L  Q  C  H  L  P  S  P  P  M  L  T  A  Q  P  C  L  L  L  P  F  Q  H  P  L  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="42327" stop="42483"/>
                    <exon start="42569" stop="42845"/>
                    <exon start="42882" stop="43065"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>618</number_coding_nucleotides>
                  <number_encoded_amino_acids>206</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LRMLMSLAAITMLLGSAMATNYTVGSPNGGWDQSTDVQAWAASKTFFVGDNLIFSYSLSHSVLEVTKAGFETCQITAPIAIYTGGMTVITLASVGKKYFICGTGGHCNVGGMKLEINTLPKATPPPPPPAKPVTPPTPTPKAPPPPTPMTKPPVASPPSLSPSPKSSSAPSPRNIHKISPAMSPSKSSHAHSPAMPPTAVPTSPSV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="48421" PGL_stop="43846"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="48099" e_stop="47880"/>
            <exon e_start="46829" e_stop="46767"/>
            <exon e_start="44827" e_stop="44750"/>
            <exon e_start="44666" e_stop="44504"/>
            <exon e_start="44384" e_stop="43846"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.657" e_score="1.000"/>
          <exon-intron don_prob="0.964" acc_prob="0.679" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="48099" e_stop="47880" e_length="220"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.991">
            <gDNA_intron_boundary i_start="47879" i_stop="46830" i_length="1050"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="46829" e_stop="46767" e_length="63"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.997">
            <gDNA_intron_boundary i_start="46766" i_stop="44828" i_length="1939"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="44827" e_stop="44750" e_length="78"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.657">
            <gDNA_intron_boundary i_start="44749" i_stop="44667" i_length="83"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="44666" e_stop="44504" e_length="163"/>
          </exon>
          <intron i_serial="4" don_prob="0.964" acc_prob="0.679">
            <gDNA_intron_boundary i_start="44503" i_stop="44385" i_length="119"/>
          </intron>
          <exon e_serial="5" e_score="0.998">
            <gDNA_exon_boundary e_start="44384" e_stop="43846" e_length="539"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48099" stop="47880"/>
              <exon start="46829" stop="46767"/>
              <exon start="44827" stop="44750"/>
              <exon start="44666" stop="44504"/>
              <exon start="44384" stop="44355"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307381" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48099" stop="47880"/>
              <exon start="46829" stop="46767"/>
              <exon start="44827" stop="44750"/>
              <exon start="44666" stop="44572"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307279" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48096" stop="47880"/>
              <exon start="46829" stop="46767"/>
              <exon start="44827" stop="44750"/>
              <exon start="44666" stop="44508"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306977" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48080" stop="47880"/>
              <exon start="46829" stop="46767"/>
              <exon start="44827" stop="44750"/>
              <exon start="44666" stop="44504"/>
              <exon start="44384" stop="44193"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E572507" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48079" stop="47880"/>
              <exon start="46829" stop="46767"/>
              <exon start="44827" stop="44750"/>
              <exon start="44666" stop="44634"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459760" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48067" stop="47880"/>
              <exon start="46829" stop="46767"/>
              <exon start="44827" stop="44750"/>
              <exon start="44666" stop="44504"/>
              <exon start="44384" stop="44362"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E466976" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48065" stop="47880"/>
              <exon start="46829" stop="46767"/>
              <exon start="44827" stop="44750"/>
              <exon start="44666" stop="44504"/>
              <exon start="44384" stop="44250"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E304221" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48058" stop="47880"/>
              <exon start="46829" stop="46767"/>
              <exon start="44827" stop="44750"/>
              <exon start="44666" stop="44504"/>
              <exon start="44384" stop="44242"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542116" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48058" stop="47880"/>
              <exon start="46829" stop="46767"/>
              <exon start="44827" stop="44750"/>
              <exon start="44666" stop="44504"/>
              <exon start="44384" stop="44298"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542123" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48057" stop="47880"/>
              <exon start="46829" stop="46767"/>
              <exon start="44827" stop="44750"/>
              <exon start="44666" stop="44504"/>
              <exon start="44384" stop="44354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E299974" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44624" stop="44504"/>
              <exon start="44384" stop="43987"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298312" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44619" stop="44504"/>
              <exon start="44384" stop="43859"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E543991" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44618" stop="44504"/>
              <exon start="44384" stop="44135"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E305275" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44617" stop="44504"/>
              <exon start="44384" stop="43859"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E543990" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44596" stop="44504"/>
              <exon start="44384" stop="43874"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542120" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44133" stop="43846"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E613532" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGGTTTTGTAGTGTGCAGAGCAAAAGGGAAGGGGGAAATTTGAAGAAGGGAATTAGGTCATGGAGGTCGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATGACGGATATTACTTCTGCTGCATCTGTTACCGTCGCTGAGTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACGATCTATGCTTCTTCTAATCTCAT : TACTGAAACAGATTACACATTTGCGGATTCAGAAGTTAGCAAGGAGGCAAGCTCACGAAAGCG : GTTAAAAAGTGAATGTTGCAGCTCTCCGAGATCTAAGGCATGCAGAGAGAAATTGCGGAGGGACAGACTGAATGAGAG : GTTCCTCGCATTGAGCTCTGTCCTTGATCCTGGAAGGCCACCAAAAACTGAGAAAGTTGCAATTCTAAGTGATGCTCAAAGGATGCTGATTGAGCTGCGAACTGAAACCCAGAAGCTGAAGGAGTCAAATGAGGAGCTGCAAGAGAAGATAAAAGAACTTAAG : GCAGAGAAGAATGAGCTCCGAGATGAAAAGCAAAGGCTAAAGGAAGAAAAGGATAATTTGGAGCAGCAGGTTAAAAGCTTAGCTTCTAAAGCAGGATTTCTCTCCCATCCTTCTGCCATGGGAGCTGCATTTACTGCACAAGGACAAGTTGCTGCAGGCAACAAATTGATGCCTTTCATTGGTTATCCCAGTGTTGCGATGTGGCAATTCATGCAACCTGCTGTTGTTGACACATCTCAAGATCATGTGCTCCGTCCTCCAGTTGCTTAAGCTGGATTTGCCAGGTGACTTGCTACTGGAGCTTTGCTCTTTTTGTTGCTCCTGTGAGTGCTAAAAGTGACAAACAACTGAGACAATTTGCTGGTTGTATTTGTATGTCTAGCTTTTATGTATGTGTCAGTCTTGATGGTTTGCTTAATCATGTATATGGCGGGTGTATACTCACCCGAAAAACAATTATGTATTATGATTCCCTAGATGGGATTCCTTCTGAAATAATTAAACTTGGTTGTATGCACATTATACCCTGTTTTAGCTAA</gDNA_template>
            <first_frame> W  F  C  S  V  Q  S  K  R  E  G  G  N  L  K  K  G  I  R  S  W  R  S  I  L  V  G  I  L  I  G  Y  L  I  M  S  *  *  R  I  L  L  L  L  H  L  L  P  S  L  S  F  S  L  R  L  L  L  I  S  A  G  L  L  K  R  S  M  L  L  L  I  S   : L  L  K  Q  I  T  H  L  R  I  Q  K  L  A  R  R  Q  A  H  E  S   : G  *  K  V  N  V  A  A  L  R  D  L  R  H  A  E  R  N  C  G  G  T  D  *  M  R   : G  S  S  H  *  A  L  S  L  I  L  E  G  H  Q  K  L  R  K  L  Q  F  *  V  M  L  K  G  C  *  L  S  C  E  L  K  P  R  S  *  R  S  Q  M  R  S  C  K  R  R  *  K  N  L  R :   Q  R  R  M  S  S  E  M  K  S  K  G  *  R  K  K  R  I  I  W  S  S  R  L  K  A  *  L  L  K  Q  D  F  S  P  I  L  L  P  W  E  L  H  L  L  H  K  D  K  L  L  Q  A  T  N  *  C  L  S  L  V  I  P  V  L  R  C  G  N  S  C  N  L  L  L  L  T  H  L  K  I  M  C  S  V  L  Q  L  L  K  L  D  L  P  G  D  L  L  L  E  L  C  S  F  C  C  S  C  E  C  *  K  *  Q  T  T  E  T  I  C  W  L  Y  L  Y  V  *  L  L  C  M  C  Q  S  *  W  F  A  *  S  C  I  W  R  V  Y  T  H  P  K  N  N  Y  V  L  *  F  P  R  W  D  S  F  *  N  N  *  T  W  L  Y  A  H  Y  T  L  F  *  L  </first_frame>
            <second_frame>  G  F  V  V  C  R  A  K  G  K  G  E  I  *  R  R  E  L  G  H  G  G  R  F  *  W  E  S  *  L  V  I  *  L  *  V  D  D  G  Y  Y  F  C  C  I  C  Y  R  R  *  V  S  V  S  G  Y  Y  *  F  Q  L  A  C  S  N  D  L  C  F  F  *  S  H  :  Y  *  N  R  L  H  I  C  G  F  R  S  *  Q  G  G  K  L  T  K  A  :  V  K  K  *  M  L  Q  L  S  E  I  *  G  M  Q  R  E  I  A  E  G  Q  T  E  *  E  :  V  P  R  I  E  L  C  P  *  S  W  K  A  T  K  N  *  E  S  C  N  S  K  *  C  S  K  D  A  D  *  A  A  N  *  N  P  E  A  E  G  V  K  *  G  A  A  R  E  D  K  R  T  *   : G  R  E  E  *  A  P  R  *  K  A  K  A  K  G  R  K  G  *  F  G  A  A  G  *  K  L  S  F  *  S  R  I  S  L  P  S  F  C  H  G  S  C  I  Y  C  T  R  T  S  C  C  R  Q  Q  I  D  A  F  H  W  L  S  Q  C  C  D  V  A  I  H  A  T  C  C  C  *  H  I  S  R  S  C  A  P  S  S  S  C  L  S  W  I  C  Q  V  T  C  Y  W  S  F  A  L  F  V  A  P  V  S  A  K  S  D  K  Q  L  R  Q  F  A  G  C  I  C  M  S  S  F  Y  V  C  V  S  L  D  G  L  L  N  H  V  Y  G  G  C  I  L  T  R  K  T  I  M  Y  Y  D  S  L  D  G  I  P  S  E  I  I  K  L  G  C  M  H  I  I  P  C  F  S  * </second_frame>
            <third_frame>   V  L  *  C  A  E  Q  K  G  R  G  K  F  E  E  G  N  *  V  M  E  V  D  S  S  G  N  P  N  W  L  F  D  Y  E  L  M  T  D  I  T  S  A  A  S  V  T  V  A  E  F  Q  S  P  A  T  I  D  F  S  W  P  A  Q  T  I  Y  A  S  S  N  L  I :   T  E  T  D  Y  T  F  A  D  S  E  V  S  K  E  A  S  S  R  K  R :   L  K  S  E  C  C  S  S  P  R  S  K  A  C  R  E  K  L  R  R  D  R  L  N  E  R :   F  L  A  L  S  S  V  L  D  P  G  R  P  P  K  T  E  K  V  A  I  L  S  D  A  Q  R  M  L  I  E  L  R  T  E  T  Q  K  L  K  E  S  N  E  E  L  Q  E  K  I  K  E  L  K  :  A  E  K  N  E  L  R  D  E  K  Q  R  L  K  E  E  K  D  N  L  E  Q  Q  V  K  S  L  A  S  K  A  G  F  L  S  H  P  S  A  M  G  A  A  F  T  A  Q  G  Q  V  A  A  G  N  K  L  M  P  F  I  G  Y  P  S  V  A  M  W  Q  F  M  Q  P  A  V  V  D  T  S  Q  D  H  V  L  R  P  P  V  A  *  A  G  F  A  R  *  L  A  T  G  A  L  L  F  L  L  L  L  *  V  L  K  V  T  N  N  *  D  N  L  L  V  V  F  V  C  L  A  F  M  Y  V  S  V  L  M  V  C  L  I  M  Y  M  A  G  V  Y  S  P  E  K  Q  L  C  I  M  I  P  *  M  G  F  L  L  K  *  L  N  L  V  V  C  T  L  Y  P  V  L  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="48043" stop="47880"/>
                    <exon start="46829" stop="46767"/>
                    <exon start="44827" stop="44750"/>
                    <exon start="44666" stop="44504"/>
                    <exon start="44384" stop="44115"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>735</number_coding_nucleotides>
                  <number_encoded_amino_acids>245</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VMEVDSSGNPNWLFDYELMTDITSAASVTVAEFQSPATIDFSWPAQTIYASSNLITETDYTFADSEVSKEASSRKRLKSECCSSPRSKACREKLRRDRLNERFLALSSVLDPGRPPKTEKVAILSDAQRMLIELRTETQKLKESNEELQEKIKELKAEKNELRDEKQRLKEEKDNLEQQVKSLASKAGFLSHPSAMGAAFTAQGQVAAGNKLMPFIGYPSVAMWQFMQPAVVDTSQDHVLRPPVA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="48421" e_stop="48258"/>
            <exon e_start="48088" e_stop="47880"/>
            <exon e_start="46829" e_stop="46767"/>
            <exon e_start="44827" e_stop="44750"/>
            <exon e_start="44666" e_stop="44504"/>
            <exon e_start="44384" e_stop="43846"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="1.000" e_score="0.933"/>
          <exon-intron don_prob="0.996" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.657" e_score="1.000"/>
          <exon-intron don_prob="0.964" acc_prob="0.679" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.933">
            <gDNA_exon_boundary e_start="48421" e_stop="48258" e_length="164"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="48257" i_stop="48089" i_length="169"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="48088" e_stop="47880" e_length="209"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.991">
            <gDNA_intron_boundary i_start="47879" i_stop="46830" i_length="1050"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="46829" e_stop="46767" e_length="63"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.997">
            <gDNA_intron_boundary i_start="46766" i_stop="44828" i_length="1939"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="44827" e_stop="44750" e_length="78"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.657">
            <gDNA_intron_boundary i_start="44749" i_stop="44667" i_length="83"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="44666" e_stop="44504" e_length="163"/>
          </exon>
          <intron i_serial="5" don_prob="0.964" acc_prob="0.679">
            <gDNA_intron_boundary i_start="44503" i_stop="44385" i_length="119"/>
          </intron>
          <exon e_serial="6" e_score="0.998">
            <gDNA_exon_boundary e_start="44384" e_stop="43846" e_length="539"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48421" stop="48258"/>
              <exon start="48088" stop="47880"/>
              <exon start="46829" stop="46767"/>
              <exon start="44827" stop="44750"/>
              <exon start="44666" stop="44633"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E431590" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48421" stop="48258"/>
              <exon start="48088" stop="47880"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464632" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48080" stop="47880"/>
              <exon start="46829" stop="46767"/>
              <exon start="44827" stop="44750"/>
              <exon start="44666" stop="44504"/>
              <exon start="44384" stop="44193"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E572507" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48079" stop="47880"/>
              <exon start="46829" stop="46767"/>
              <exon start="44827" stop="44750"/>
              <exon start="44666" stop="44634"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459760" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48067" stop="47880"/>
              <exon start="46829" stop="46767"/>
              <exon start="44827" stop="44750"/>
              <exon start="44666" stop="44504"/>
              <exon start="44384" stop="44362"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E466976" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48065" stop="47880"/>
              <exon start="46829" stop="46767"/>
              <exon start="44827" stop="44750"/>
              <exon start="44666" stop="44504"/>
              <exon start="44384" stop="44250"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E304221" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48058" stop="47880"/>
              <exon start="46829" stop="46767"/>
              <exon start="44827" stop="44750"/>
              <exon start="44666" stop="44504"/>
              <exon start="44384" stop="44242"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542116" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48058" stop="47880"/>
              <exon start="46829" stop="46767"/>
              <exon start="44827" stop="44750"/>
              <exon start="44666" stop="44504"/>
              <exon start="44384" stop="44298"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542123" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48057" stop="47880"/>
              <exon start="46829" stop="46767"/>
              <exon start="44827" stop="44750"/>
              <exon start="44666" stop="44504"/>
              <exon start="44384" stop="44354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E299974" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44624" stop="44504"/>
              <exon start="44384" stop="43987"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298312" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44619" stop="44504"/>
              <exon start="44384" stop="43859"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E543991" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44618" stop="44504"/>
              <exon start="44384" stop="44135"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E305275" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44617" stop="44504"/>
              <exon start="44384" stop="43859"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E543990" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44596" stop="44504"/>
              <exon start="44384" stop="43874"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542120" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44133" stop="43846"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E613532" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTCCACTCTAGTTGCAGTTTCCTTCTCAGCAACAAATAGTATAATAGCAATGAAAACGATGATTGATGAACGATAGCTACATGTCTAGTGAAAAGTAGCACAAATCATGCTGCTCTTCCTAGTCCAGCCAAAACAGCGTTTACTTTTTGAGTTAGAAAATGCA : TGTGCAGAGCAAAAGGGAAGGGGGAAATTTGAAGAAGGGAATTAGGTCATGGAGGTCGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATGACGGATATTACTTCTGCTGCATCTGTTACCGTCGCTGAGTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACGATCTATGCTTCTTCTAATCTCAT : TACTGAAACAGATTACACATTTGCGGATTCAGAAGTTAGCAAGGAGGCAAGCTCACGAAAGCG : GTTAAAAAGTGAATGTTGCAGCTCTCCGAGATCTAAGGCATGCAGAGAGAAATTGCGGAGGGACAGACTGAATGAGAG : GTTCCTCGCATTGAGCTCTGTCCTTGATCCTGGAAGGCCACCAAAAACTGAGAAAGTTGCAATTCTAAGTGATGCTCAAAGGATGCTGATTGAGCTGCGAACTGAAACCCAGAAGCTGAAGGAGTCAAATGAGGAGCTGCAAGAGAAGATAAAAGAACTTAAG : GCAGAGAAGAATGAGCTCCGAGATGAAAAGCAAAGGCTAAAGGAAGAAAAGGATAATTTGGAGCAGCAGGTTAAAAGCTTAGCTTCTAAAGCAGGATTTCTCTCCCATCCTTCTGCCATGGGAGCTGCATTTACTGCACAAGGACAAGTTGCTGCAGGCAACAAATTGATGCCTTTCATTGGTTATCCCAGTGTTGCGATGTGGCAATTCATGCAACCTGCTGTTGTTGACACATCTCAAGATCATGTGCTCCGTCCTCCAGTTGCTTAAGCTGGATTTGCCAGGTGACTTGCTACTGGAGCTTTGCTCTTTTTGTTGCTCCTGTGAGTGCTAAAAGTGACAAACAACTGAGACAATTTGCTGGTTGTATTTGTATGTCTAGCTTTTATGTATGTGTCAGTCTTGATGGTTTGCTTAATCATGTATATGGCGGGTGTATACTCACCCGAAAAACAATTATGTATTATGATTCCCTAGATGGGATTCCTTCTGAAATAATTAAACTTGGTTGTATGCACATTATACCCTGTTTTAGCTAA</gDNA_template>
            <first_frame> V  P  L  *  L  Q  F  P  S  Q  Q  Q  I  V  *  *  Q  *  K  R  *  L  M  N  D  S  Y  M  S  S  E  K  *  H  K  S  C  C  S  S  *  S  S  Q  N  S  V  Y  F  L  S  *  K  M  H :   V  Q  S  K  R  E  G  G  N  L  K  K  G  I  R  S  W  R  S  I  L  V  G  I  L  I  G  Y  L  I  M  S  *  *  R  I  L  L  L  L  H  L  L  P  S  L  S  F  S  L  R  L  L  L  I  S  A  G  L  L  K  R  S  M  L  L  L  I  S   : L  L  K  Q  I  T  H  L  R  I  Q  K  L  A  R  R  Q  A  H  E  S   : G  *  K  V  N  V  A  A  L  R  D  L  R  H  A  E  R  N  C  G  G  T  D  *  M  R   : G  S  S  H  *  A  L  S  L  I  L  E  G  H  Q  K  L  R  K  L  Q  F  *  V  M  L  K  G  C  *  L  S  C  E  L  K  P  R  S  *  R  S  Q  M  R  S  C  K  R  R  *  K  N  L  R :   Q  R  R  M  S  S  E  M  K  S  K  G  *  R  K  K  R  I  I  W  S  S  R  L  K  A  *  L  L  K  Q  D  F  S  P  I  L  L  P  W  E  L  H  L  L  H  K  D  K  L  L  Q  A  T  N  *  C  L  S  L  V  I  P  V  L  R  C  G  N  S  C  N  L  L  L  L  T  H  L  K  I  M  C  S  V  L  Q  L  L  K  L  D  L  P  G  D  L  L  L  E  L  C  S  F  C  C  S  C  E  C  *  K  *  Q  T  T  E  T  I  C  W  L  Y  L  Y  V  *  L  L  C  M  C  Q  S  *  W  F  A  *  S  C  I  W  R  V  Y  T  H  P  K  N  N  Y  V  L  *  F  P  R  W  D  S  F  *  N  N  *  T  W  L  Y  A  H  Y  T  L  F  *  L  </first_frame>
            <second_frame>  F  H  S  S  C  S  F  L  L  S  N  K  *  Y  N  S  N  E  N  D  D  *  *  T  I  A  T  C  L  V  K  S  S  T  N  H  A  A  L  P  S  P  A  K  T  A  F  T  F  *  V  R  K  C   : M  C  R  A  K  G  K  G  E  I  *  R  R  E  L  G  H  G  G  R  F  *  W  E  S  *  L  V  I  *  L  *  V  D  D  G  Y  Y  F  C  C  I  C  Y  R  R  *  V  S  V  S  G  Y  Y  *  F  Q  L  A  C  S  N  D  L  C  F  F  *  S  H  :  Y  *  N  R  L  H  I  C  G  F  R  S  *  Q  G  G  K  L  T  K  A  :  V  K  K  *  M  L  Q  L  S  E  I  *  G  M  Q  R  E  I  A  E  G  Q  T  E  *  E  :  V  P  R  I  E  L  C  P  *  S  W  K  A  T  K  N  *  E  S  C  N  S  K  *  C  S  K  D  A  D  *  A  A  N  *  N  P  E  A  E  G  V  K  *  G  A  A  R  E  D  K  R  T  *   : G  R  E  E  *  A  P  R  *  K  A  K  A  K  G  R  K  G  *  F  G  A  A  G  *  K  L  S  F  *  S  R  I  S  L  P  S  F  C  H  G  S  C  I  Y  C  T  R  T  S  C  C  R  Q  Q  I  D  A  F  H  W  L  S  Q  C  C  D  V  A  I  H  A  T  C  C  C  *  H  I  S  R  S  C  A  P  S  S  S  C  L  S  W  I  C  Q  V  T  C  Y  W  S  F  A  L  F  V  A  P  V  S  A  K  S  D  K  Q  L  R  Q  F  A  G  C  I  C  M  S  S  F  Y  V  C  V  S  L  D  G  L  L  N  H  V  Y  G  G  C  I  L  T  R  K  T  I  M  Y  Y  D  S  L  D  G  I  P  S  E  I  I  K  L  G  C  M  H  I  I  P  C  F  S  * </second_frame>
            <third_frame>   S  T  L  V  A  V  S  F  S  A  T  N  S  I  I  A  M  K  T  M  I  D  E  R  *  L  H  V  *  *  K  V  A  Q  I  M  L  L  F  L  V  Q  P  K  Q  R  L  L  F  E  L  E  N  A  :  C  A  E  Q  K  G  R  G  K  F  E  E  G  N  *  V  M  E  V  D  S  S  G  N  P  N  W  L  F  D  Y  E  L  M  T  D  I  T  S  A  A  S  V  T  V  A  E  F  Q  S  P  A  T  I  D  F  S  W  P  A  Q  T  I  Y  A  S  S  N  L  I :   T  E  T  D  Y  T  F  A  D  S  E  V  S  K  E  A  S  S  R  K  R :   L  K  S  E  C  C  S  S  P  R  S  K  A  C  R  E  K  L  R  R  D  R  L  N  E  R :   F  L  A  L  S  S  V  L  D  P  G  R  P  P  K  T  E  K  V  A  I  L  S  D  A  Q  R  M  L  I  E  L  R  T  E  T  Q  K  L  K  E  S  N  E  E  L  Q  E  K  I  K  E  L  K  :  A  E  K  N  E  L  R  D  E  K  Q  R  L  K  E  E  K  D  N  L  E  Q  Q  V  K  S  L  A  S  K  A  G  F  L  S  H  P  S  A  M  G  A  A  F  T  A  Q  G  Q  V  A  A  G  N  K  L  M  P  F  I  G  Y  P  S  V  A  M  W  Q  F  M  Q  P  A  V  V  D  T  S  Q  D  H  V  L  R  P  P  V  A  *  A  G  F  A  R  *  L  A  T  G  A  L  L  F  L  L  L  L  *  V  L  K  V  T  N  N  *  D  N  L  L  V  V  F  V  C  L  A  F  M  Y  V  S  V  L  M  V  C  L  I  M  Y  M  A  G  V  Y  S  P  E  K  Q  L  C  I  M  I  P  *  M  G  F  L  L  K  *  L  N  L  V  V  C  T  L  Y  P  V  L  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="-"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="48043" stop="47880"/>
                    <exon start="46829" stop="46767"/>
                    <exon start="44827" stop="44750"/>
                    <exon start="44666" stop="44504"/>
                    <exon start="44384" stop="44115"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>735</number_coding_nucleotides>
                  <number_encoded_amino_acids>245</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VMEVDSSGNPNWLFDYELMTDITSAASVTVAEFQSPATIDFSWPAQTIYASSNLITETDYTFADSEVSKEASSRKRLKSECCSSPRSKACREKLRRDRLNERFLALSSVLDPGRPPKTEKVAILSDAQRMLIELRTETQKLKESNEELQEKIKELKAEKNELRDEKQRLKEEKDNLEQQVKSLASKAGFLSHPSAMGAAFTAQGQVAAGNKLMPFIGYPSVAMWQFMQPAVVDTSQDHVLRPPVA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="48421" e_stop="48258"/>
            <exon e_start="48088" e_stop="47880"/>
            <exon e_start="46829" e_stop="46455"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="1.000" e_score="0.933"/>
          <exon-intron don_prob="0.996" acc_prob="0.991" e_score="0.943"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.933">
            <gDNA_exon_boundary e_start="48421" e_stop="48258" e_length="164"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="48257" i_stop="48089" i_length="169"/>
          </intron>
          <exon e_serial="2" e_score="0.943">
            <gDNA_exon_boundary e_start="48088" e_stop="47880" e_length="209"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.991">
            <gDNA_intron_boundary i_start="47879" i_stop="46830" i_length="1050"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="46829" e_stop="46455" e_length="375"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48421" stop="48258"/>
              <exon start="48088" stop="47880"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464632" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48076" stop="47880"/>
              <exon start="46829" stop="46455"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302129" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTCCACTCTAGTTGCAGTTTCCTTCTCAGCAACAAATAGTATAATAGCAATGAAAACGATGATTGATGAACGATAGCTACATGTCTAGTGAAAAGTAGCACAAATCATGCTGCTCTTCCTAGTCCAGCCAAAACAGCGTTTACTTTTTGAGTTAGAAAATGCA : TGTGCAGAGCAAAAGGGAAGGGGGAAATTTGAAGAAGGGAATTAGGTCATGGAGGTCGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATGACGGATATTACTTCTGCTGCATCTGTTACCGTCGCTGAGTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACGATCTATGCTTCTTCTAATCTCAT : TACTGAAACAGATTACACATTTGCGGATTCAGAAGTTAGCAAGGAGGCAAGCTCACGAAAGCGGTAAATAAATTATCCATTTCTTTTATATCATGGTTTGATAGGTTTGATGAACTCTTTTTATTACATTCTTCTTGTTTTAGAGATCTGGATCTGTTTATATATCCTATGTTCTAGTAAGGAGAAAACCTATTTGGCTATGGTTGTCCACTCTTAAATGTACTCATTTAAGAATTTTTCTTTCAAAATATGTGTATCCTACAACTATGTCACAGGCTAAAATGAAGTCTTGAATAGCCTTTCCTCCATTATTCCTAATATAACCATATCCCCCATGTATTGGGTCAAAACTGTCGTTATCTTTACCTACATGAC</gDNA_template>
            <first_frame> V  P  L  *  L  Q  F  P  S  Q  Q  Q  I  V  *  *  Q  *  K  R  *  L  M  N  D  S  Y  M  S  S  E  K  *  H  K  S  C  C  S  S  *  S  S  Q  N  S  V  Y  F  L  S  *  K  M  H :   V  Q  S  K  R  E  G  G  N  L  K  K  G  I  R  S  W  R  S  I  L  V  G  I  L  I  G  Y  L  I  M  S  *  *  R  I  L  L  L  L  H  L  L  P  S  L  S  F  S  L  R  L  L  L  I  S  A  G  L  L  K  R  S  M  L  L  L  I  S   : L  L  K  Q  I  T  H  L  R  I  Q  K  L  A  R  R  Q  A  H  E  S  G  K  *  I  I  H  F  F  Y  I  M  V  *  *  V  *  *  T  L  F  I  T  F  F  L  F  *  R  S  G  S  V  Y  I  S  Y  V  L  V  R  R  K  P  I  W  L  W  L  S  T  L  K  C  T  H  L  R  I  F  L  S  K  Y  V  Y  P  T  T  M  S  Q  A  K  M  K  S  *  I  A  F  P  P  L  F  L  I  *  P  Y  P  P  C  I  G  S  K  L  S  L  S  L  P  T  *  </first_frame>
            <second_frame>  F  H  S  S  C  S  F  L  L  S  N  K  *  Y  N  S  N  E  N  D  D  *  *  T  I  A  T  C  L  V  K  S  S  T  N  H  A  A  L  P  S  P  A  K  T  A  F  T  F  *  V  R  K  C   : M  C  R  A  K  G  K  G  E  I  *  R  R  E  L  G  H  G  G  R  F  *  W  E  S  *  L  V  I  *  L  *  V  D  D  G  Y  Y  F  C  C  I  C  Y  R  R  *  V  S  V  S  G  Y  Y  *  F  Q  L  A  C  S  N  D  L  C  F  F  *  S  H  :  Y  *  N  R  L  H  I  C  G  F  R  S  *  Q  G  G  K  L  T  K  A  V  N  K  L  S  I  S  F  I  S  W  F  D  R  F  D  E  L  F  L  L  H  S  S  C  F  R  D  L  D  L  F  I  Y  P  M  F  *  *  G  E  N  L  F  G  Y  G  C  P  L  L  N  V  L  I  *  E  F  F  F  Q  N  M  C  I  L  Q  L  C  H  R  L  K  *  S  L  E  *  P  F  L  H  Y  S  *  Y  N  H  I  P  H  V  L  G  Q  N  C  R  Y  L  Y  L  H  D </second_frame>
            <third_frame>   S  T  L  V  A  V  S  F  S  A  T  N  S  I  I  A  M  K  T  M  I  D  E  R  *  L  H  V  *  *  K  V  A  Q  I  M  L  L  F  L  V  Q  P  K  Q  R  L  L  F  E  L  E  N  A  :  C  A  E  Q  K  G  R  G  K  F  E  E  G  N  *  V  M  E  V  D  S  S  G  N  P  N  W  L  F  D  Y  E  L  M  T  D  I  T  S  A  A  S  V  T  V  A  E  F  Q  S  P  A  T  I  D  F  S  W  P  A  Q  T  I  Y  A  S  S  N  L  I :   T  E  T  D  Y  T  F  A  D  S  E  V  S  K  E  A  S  S  R  K  R  *  I  N  Y  P  F  L  L  Y  H  G  L  I  G  L  M  N  S  F  Y  Y  I  L  L  V  L  E  I  W  I  C  L  Y  I  L  C  S  S  K  E  K  T  Y  L  A  M  V  V  H  S  *  M  Y  S  F  K  N  F  S  F  K  I  C  V  S  Y  N  Y  V  T  G  *  N  E  V  L  N  S  L  S  S  I  I  P  N  I  T  I  S  P  M  Y  W  V  K  T  V  V  I  F  T  Y  M   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="-"/>
                <serials PGL_serial="7" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="48043" stop="47880"/>
                    <exon start="46829" stop="46763"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VMEVDSSGNPNWLFDYELMTDITSAASVTVAEFQSPATIDFSWPAQTIYASSNLITETDYTFADSEVSKEASSRKR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="64155" PGL_stop="63451"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="64155" e_stop="63451"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.906"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.906">
            <gDNA_exon_boundary e_start="64155" e_stop="63451" e_length="705"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64155" stop="63451"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E620275" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCAAATTTCTGAACCAAACCCAGAAAAGTGAAAAGAAGAAAGGAAAAAAAATGTGTTATGTGGGTAAAGCTACCAAGATCTTCATCTTCATTGTCACTGTTCTAGTTGTTACTGGTCTTATATTGGGATTTGGGTTACTTAGGCATCACAATCAGAAAGGGGAAAACAAATGTTCTGGTGATTCTTGTGACCAAAATCAGTACCAAAGCCCCATTGTTTACCCACCCCCTACCACCTCCACTAACACCAATAACCCAATTTCACCATTGCCAATTTCAACTCCTTCACAGCCAAATACTCCAAATCCTAACTTACCCCAACCACCACCACCACCCTCACCAGATAATCCTACCCCTGAAACACCTAATTTAACACCACCGCCGCCTCCAGACACCGTGGTCTCCACTCCGCCGCCGCTTCCGCCGCCAGCTGTCTCATTAACTCCGCCGCCAACATTGAGCCCTCCCAGCCCCGTAACGGTGTCGCCAGGTCCAGTGCAATCTTAGAGTTTTCTGATCTTCGTTACCATTAATTTCGATTAACATTTTAGTATTTTGTATAGAAAAATTTGGCATCTCGCTGCTACTGGTTTTTGGTAGCAGATTTGATTTTTTTTTTTTTGCAGACAATTTTGTTCTCCATTGTAATTTTTAGTATCATGAATCTGATTCTTGCTTATTCAGCTGAGATCATTGAACAATTTTT</gDNA_template>
            <first_frame> P  N  F  *  T  K  P  R  K  V  K  R  R  K  E  K  K  C  V  M  W  V  K  L  P  R  S  S  S  S  L  S  L  F  *  L  L  L  V  L  Y  W  D  L  G  Y  L  G  I  T  I  R  K  G  K  T  N  V  L  V  I  L  V  T  K  I  S  T  K  A  P  L  F  T  H  P  L  P  P  P  L  T  P  I  T  Q  F  H  H  C  Q  F  Q  L  L  H  S  Q  I  L  Q  I  L  T  Y  P  N  H  H  H  H  P  H  Q  I  I  L  P  L  K  H  L  I  *  H  H  R  R  L  Q  T  P  W  S  P  L  R  R  R  F  R  R  Q  L  S  H  *  L  R  R  Q  H  *  A  L  P  A  P  *  R  C  R  Q  V  Q  C  N  L  R  V  F  *  S  S  L  P  L  I  S  I  N  I  L  V  F  C  I  E  K  F  G  I  S  L  L  L  V  F  G  S  R  F  D  F  F  F  F  A  D  N  F  V  L  H  C  N  F  *  Y  H  E  S  D  S  C  L  F  S  *  D  H  *  T  I  F </first_frame>
            <second_frame>  Q  I  S  E  P  N  P  E  K  *  K  E  E  R  K  K  N  V  L  C  G  *  S  Y  Q  D  L  H  L  H  C  H  C  S  S  C  Y  W  S  Y  I  G  I  W  V  T  *  A  S  Q  S  E  R  G  K  Q  M  F  W  *  F  L  *  P  K  S  V  P  K  P  H  C  L  P  T  P  Y  H  L  H  *  H  Q  *  P  N  F  T  I  A  N  F  N  S  F  T  A  K  Y  S  K  S  *  L  T  P  T  T  T  T  T  L  T  R  *  S  Y  P  *  N  T  *  F  N  T  T  A  A  S  R  H  R  G  L  H  S  A  A  A  S  A  A  S  C  L  I  N  S  A  A  N  I  E  P  S  Q  P  R  N  G  V  A  R  S  S  A  I  L  E  F  S  D  L  R  Y  H  *  F  R  L  T  F  *  Y  F  V  *  K  N  L  A  S  R  C  Y  W  F  L  V  A  D  L  I  F  F  F  L  Q  T  I  L  F  S  I  V  I  F  S  I  M  N  L  I  L  A  Y  S  A  E  I  I  E  Q  F   </second_frame>
            <third_frame>   K  F  L  N  Q  T  Q  K  S  E  K  K  K  G  K  K  M  C  Y  V  G  K  A  T  K  I  F  I  F  I  V  T  V  L  V  V  T  G  L  I  L  G  F  G  L  L  R  H  H  N  Q  K  G  E  N  K  C  S  G  D  S  C  D  Q  N  Q  Y  Q  S  P  I  V  Y  P  P  P  T  T  S  T  N  T  N  N  P  I  S  P  L  P  I  S  T  P  S  Q  P  N  T  P  N  P  N  L  P  Q  P  P  P  P  P  S  P  D  N  P  T  P  E  T  P  N  L  T  P  P  P  P  P  D  T  V  V  S  T  P  P  P  L  P  P  P  A  V  S  L  T  P  P  P  T  L  S  P  P  S  P  V  T  V  S  P  G  P  V  Q  S  *  S  F  L  I  F  V  T  I  N  F  D  *  H  F  S  I  L  Y  R  K  I  W  H  L  A  A  T  G  F  W  *  Q  I  *  F  F  F  F  C  R  Q  F  C  S  P  L  *  F  L  V  S  *  I  *  F  L  L  I  Q  L  R  S  L  N  N  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="64153" stop="63650"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>501</number_coding_nucleotides>
                  <number_encoded_amino_acids>167</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KFLNQTQKSEKKKGKKMCYVGKATKIFIFIVTVLVVTGLILGFGLLRHHNQKGENKCSGDSCDQNQYQSPIVYPPPTTSTNTNNPISPLPISTPSQPNTPNPNLPQPPPPPSPDNPTPETPNLTPPPPPDTVVSTPPPLPPPAVSLTPPPTLSPPSPVTVSPGPVQS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="71199" PGL_stop="74771"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="71199" e_stop="71591"/>
            <exon e_start="72497" e_stop="72562"/>
            <exon e_start="72658" e_stop="73057"/>
            <exon e_start="73165" e_stop="73321"/>
            <exon e_start="73609" e_stop="73872"/>
            <exon e_start="73984" e_stop="74193"/>
            <exon e_start="74616" e_stop="74771"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="0.997"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.864" e_score="0.986"/>
          <exon-intron don_prob="0.932" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.835" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.995" e_score="1.000"/>
          <exon-only e_score="0.974"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="71199" e_stop="71591" e_length="393"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="71592" i_stop="72496" i_length="905"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="72497" e_stop="72562" e_length="66"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="72563" i_stop="72657" i_length="95"/>
          </intron>
          <exon e_serial="3" e_score="0.986">
            <gDNA_exon_boundary e_start="72658" e_stop="73057" e_length="400"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.864">
            <gDNA_intron_boundary i_start="73058" i_stop="73164" i_length="107"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="73165" e_stop="73321" e_length="157"/>
          </exon>
          <intron i_serial="4" don_prob="0.932" acc_prob="0.999">
            <gDNA_intron_boundary i_start="73322" i_stop="73608" i_length="287"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="73609" e_stop="73872" e_length="264"/>
          </exon>
          <intron i_serial="5" don_prob="0.987" acc_prob="0.835">
            <gDNA_intron_boundary i_start="73873" i_stop="73983" i_length="111"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="73984" e_stop="74193" e_length="210"/>
          </exon>
          <intron i_serial="6" don_prob="0.991" acc_prob="0.995">
            <gDNA_intron_boundary i_start="74194" i_stop="74615" i_length="422"/>
          </intron>
          <exon e_serial="7" e_score="0.974">
            <gDNA_exon_boundary e_start="74616" e_stop="74771" e_length="156"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71199" stop="71591"/>
              <exon start="72497" stop="72562"/>
              <exon start="72658" stop="72812"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262879" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72515" stop="72562"/>
              <exon start="72658" stop="73027"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355733" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72946" stop="73057"/>
              <exon start="73165" stop="73321"/>
              <exon start="73609" stop="73872"/>
              <exon start="73984" stop="74193"/>
              <exon start="74616" stop="74771"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E736106" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73246" stop="73321"/>
              <exon start="73609" stop="73872"/>
              <exon start="73984" stop="74162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256751" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTTCAAAATCAAATTTTGGGATCCACACATATAAAAATATTGCAGTCCACAAAAAAGTGTTCCATAAGGATTATTTGATTCTTTGTGATGAATGTCTTTTACCTTAGATATTTTAAACATTTTTTCTTTTGCAATGTTGAAATTAATATTGTTGTAAATTTTTTAAAGCCCAGAAACAGGAAATTTGTTGATATTTTAGATGAATATCAGTACGTCTAGCATTGGAACTTCAAATTTAGGTGTTTTACCTGAGGTAATGGGATTTCCACACCAAAAATTGTTGATTAAGAAATTTCATTTGGCAAGAAAACAACTTCTCCGGCAAAATATTACATTTTCTTGTAATCGAAAGACTGGAATTACTCGAGCCATTGCACCAGAAGCAACAAAG : GTTACGGGTCCAACATTGAGCACTGTCCCTTTAGCCAACTATGTGCCTGTTTATGTAATGCTTCCA : TTAGATGTTATTTCAATTGACAATGTATTTCGGGACCAAGTTAAGTGTGAGAAGCAGTTCAAGGAACTGAGAGAAGCGGGTGTTGATGGGATCATGGTGGATGTCTGGTGGGGAATAGTAGAGGCCAATGGCCCCGGGCTATATGATTGGTCTGCGTATAGGAGTTTGTTCCAACTTGTTCAAAAGATTGGCCTCAAAATACAAGCTATTATGTCATTCCACCAATGTGGTGGCAATATAGGAGATGATGTTTTCATTCCTATACCCAAATGGGTACTAGCTATCGGAGAAAACAACCCTGATATTTTCTATACTAATCGGACTGGTACAAGGAACAAAGAATGCCTCTCACTTGCCGTGGATAACCAACCTCTATTTGAAGGGTCGAACTGCTATTCAG : CGACTACATGAGGAGCTTTAGAGAGAACATGTCCGACTTCTTGGAAGCTGGAAGCATAGTAGACATAGAGGTAGGACTTGGTCCTGCCGGTGAGCTTAGATATCCATCGTACACTCAGTCTCAAGGATGGAAATTCCCCGGCATTGGAGAATTTCAG : TGCTATGACAAGTACATGAGAACAGATTTCAAGGGGGCAGCAACAAAGGCAGGCCACTCAGAGTGGGATCTTCCAGATGATGCAGGAACATATAATAATGTACCCGCCGAAACAGGATTCTTTGGACCAAATGGTACATACCTTACCGAGAAAGGGAAGTTCTTTTTGACCTGGTACTCTAGCAAGCTACTGCTTCACGGAGATCAGATCCTTGATGAAGCAAACAAAGCTTTCCTGGGATGCAAAGTGAAGCTATCAGCTAAA : GTAGCTGGAATTCACTGGTGGTACAAAGATGCCAGCCATGCTGCAGAGCTAACAGCGGGATTTTATAATTTGGACAATCGAGATGGCTATAGACCAATAGCAAGGATGTTATCGAGACACTATGGTACCTTTAATTTCACTTGCCTTGAGATGAGGAATTCAGAACATCCAGCTTATGCTAAGTCTGGCCCTCAAGAGCTAGTTCAACAG : GTTTTGAGTGTTGGCTGGAAAGAGAACATTGATGTAGCAGGTGAGAATGCGCTTGCAAGATATGACGGCTATGCCTACAACCAAATCCTTCTCAACGCTAGACCAAATGGTATCAACAAAAACGGTCCACCAAAACTAAAAATGGCTGGGCTGACT</gDNA_template>
            <first_frame> F  F  K  I  K  F  W  D  P  H  I  *  K  Y  C  S  P  Q  K  S  V  P  *  G  L  F  D  S  L  *  *  M  S  F  T  L  D  I  L  N  I  F  S  F  A  M  L  K  L  I  L  L  *  I  F  *  S  P  E  T  G  N  L  L  I  F  *  M  N  I  S  T  S  S  I  G  T  S  N  L  G  V  L  P  E  V  M  G  F  P  H  Q  K  L  L  I  K  K  F  H  L  A  R  K  Q  L  L  R  Q  N  I  T  F  S  C  N  R  K  T  G  I  T  R  A  I  A  P  E  A  T  K  :  V  T  G  P  T  L  S  T  V  P  L  A  N  Y  V  P  V  Y  V  M  L  P  :  L  D  V  I  S  I  D  N  V  F  R  D  Q  V  K  C  E  K  Q  F  K  E  L  R  E  A  G  V  D  G  I  M  V  D  V  W  W  G  I  V  E  A  N  G  P  G  L  Y  D  W  S  A  Y  R  S  L  F  Q  L  V  Q  K  I  G  L  K  I  Q  A  I  M  S  F  H  Q  C  G  G  N  I  G  D  D  V  F  I  P  I  P  K  W  V  L  A  I  G  E  N  N  P  D  I  F  Y  T  N  R  T  G  T  R  N  K  E  C  L  S  L  A  V  D  N  Q  P  L  F  E  G  S  N  C  Y  S   : A  T  T  *  G  A  L  E  R  T  C  P  T  S  W  K  L  E  A  *  *  T  *  R  *  D  L  V  L  P  V  S  L  D  I  H  R  T  L  S  L  K  D  G  N  S  P  A  L  E  N  F  S :   A  M  T  S  T  *  E  Q  I  S  R  G  Q  Q  Q  R  Q  A  T  Q  S  G  I  F  Q  M  M  Q  E  H  I  I  M  Y  P  P  K  Q  D  S  L  D  Q  M  V  H  T  L  P  R  K  G  S  S  F  *  P  G  T  L  A  S  Y  C  F  T  E  I  R  S  L  M  K  Q  T  K  L  S  W  D  A  K  *  S  Y  Q  L  K :   *  L  E  F  T  G  G  T  K  M  P  A  M  L  Q  S  *  Q  R  D  F  I  I  W  T  I  E  M  A  I  D  Q  *  Q  G  C  Y  R  D  T  M  V  P  L  I  S  L  A  L  R  *  G  I  Q  N  I  Q  L  M  L  S  L  A  L  K  S  *  F  N  R :   F  *  V  L  A  G  K  R  T  L  M  *  Q  V  R  M  R  L  Q  D  M  T  A  M  P  T  T  K  S  F  S  T  L  D  Q  M  V  S  T  K  T  V  H  Q  N  *  K  W  L  G  *   </first_frame>
            <second_frame>  F  S  K  S  N  F  G  I  H  T  Y  K  N  I  A  V  H  K  K  V  F  H  K  D  Y  L  I  L  C  D  E  C  L  L  P  *  I  F  *  T  F  F  L  L  Q  C  *  N  *  Y  C  C  K  F  F  K  A  Q  K  Q  E  I  C  *  Y  F  R  *  I  S  V  R  L  A  L  E  L  Q  I  *  V  F  Y  L  R  *  W  D  F  H  T  K  N  C  *  L  R  N  F  I  W  Q  E  N  N  F  S  G  K  I  L  H  F  L  V  I  E  R  L  E  L  L  E  P  L  H  Q  K  Q  Q  R :   L  R  V  Q  H  *  A  L  S  L  *  P  T  M  C  L  F  M  *  C  F  H :   *  M  L  F  Q  L  T  M  Y  F  G  T  K  L  S  V  R  S  S  S  R  N  *  E  K  R  V  L  M  G  S  W  W  M  S  G  G  E  *  *  R  P  M  A  P  G  Y  M  I  G  L  R  I  G  V  C  S  N  L  F  K  R  L  A  S  K  Y  K  L  L  C  H  S  T  N  V  V  A  I  *  E  M  M  F  S  F  L  Y  P  N  G  Y  *  L  S  E  K  T  T  L  I  F  S  I  L  I  G  L  V  Q  G  T  K  N  A  S  H  L  P  W  I  T  N  L  Y  L  K  G  R  T  A  I  Q  :  R  L  H  E  E  L  *  R  E  H  V  R  L  L  G  S  W  K  H  S  R  H  R  G  R  T  W  S  C  R  *  A  *  I  S  I  V  H  S  V  S  R  M  E  I  P  R  H  W  R  I  S   : V  L  *  Q  V  H  E  N  R  F  Q  G  G  S  N  K  G  R  P  L  R  V  G  S  S  R  *  C  R  N  I  *  *  C  T  R  R  N  R  I  L  W  T  K  W  Y  I  P  Y  R  E  R  E  V  L  F  D  L  V  L  *  Q  A  T  A  S  R  R  S  D  P  *  *  S  K  Q  S  F  P  G  M  Q  S  E  A  I  S  *   : S  S  W  N  S  L  V  V  Q  R  C  Q  P  C  C  R  A  N  S  G  I  L  *  F  G  Q  S  R  W  L  *  T  N  S  K  D  V  I  E  T  L  W  Y  L  *  F  H  L  P  *  D  E  E  F  R  T  S  S  L  C  *  V  W  P  S  R  A  S  S  T   : G  F  E  C  W  L  E  R  E  H  *  C  S  R  *  E  C  A  C  K  I  *  R  L  C  L  Q  P  N  P  S  Q  R  *  T  K  W  Y  Q  Q  K  R  S  T  K  T  K  N  G  W  A  D  </second_frame>
            <third_frame>   F  Q  N  Q  I  L  G  S  T  H  I  K  I  L  Q  S  T  K  K  C  S  I  R  I  I  *  F  F  V  M  N  V  F  Y  L  R  Y  F  K  H  F  F  F  C  N  V  E  I  N  I  V  V  N  F  L  K  P  R  N  R  K  F  V  D  I  L  D  E  Y  Q  Y  V  *  H  W  N  F  K  F  R  C  F  T  *  G  N  G  I  S  T  P  K  I  V  D  *  E  I  S  F  G  K  K  T  T  S  P  A  K  Y  Y  I  F  L  *  S  K  D  W  N  Y  S  S  H  C  T  R  S  N  K   : G  Y  G  S  N  I  E  H  C  P  F  S  Q  L  C  A  C  L  C  N  A  S   : I  R  C  Y  F  N  *  Q  C  I  S  G  P  S  *  V  *  E  A  V  Q  G  T  E  R  S  G  C  *  W  D  H  G  G  C  L  V  G  N  S  R  G  Q  W  P  R  A  I  *  L  V  C  V  *  E  F  V  P  T  C  S  K  D  W  P  Q  N  T  S  Y  Y  V  I  P  P  M  W  W  Q  Y  R  R  *  C  F  H  S  Y  T  Q  M  G  T  S  Y  R  R  K  Q  P  *  Y  F  L  Y  *  S  D  W  Y  K  E  Q  R  M  P  L  T  C  R  G  *  P  T  S  I  *  R  V  E  L  L  F  S :   D  Y  M  R  S  F  R  E  N  M  S  D  F  L  E  A  G  S  I  V  D  I  E  V  G  L  G  P  A  G  E  L  R  Y  P  S  Y  T  Q  S  Q  G  W  K  F  P  G  I  G  E  F  Q  :  C  Y  D  K  Y  M  R  T  D  F  K  G  A  A  T  K  A  G  H  S  E  W  D  L  P  D  D  A  G  T  Y  N  N  V  P  A  E  T  G  F  F  G  P  N  G  T  Y  L  T  E  K  G  K  F  F  L  T  W  Y  S  S  K  L  L  L  H  G  D  Q  I  L  D  E  A  N  K  A  F  L  G  C  K  V  K  L  S  A  K  :  V  A  G  I  H  W  W  Y  K  D  A  S  H  A  A  E  L  T  A  G  F  Y  N  L  D  N  R  D  G  Y  R  P  I  A  R  M  L  S  R  H  Y  G  T  F  N  F  T  C  L  E  M  R  N  S  E  H  P  A  Y  A  K  S  G  P  Q  E  L  V  Q  Q  :  V  L  S  V  G  W  K  E  N  I  D  V  A  G  E  N  A  L  A  R  Y  D  G  Y  A  Y  N  Q  I  L  L  N  A  R  P  N  G  I  N  K  N  G  P  P  K  L  K  M  A  G  L  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="73038" stop="73057"/>
                    <exon start="73165" stop="73321"/>
                    <exon start="73609" stop="73872"/>
                    <exon start="73984" stop="74193"/>
                    <exon start="74616" stop="74771"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>807</number_coding_nucleotides>
                  <number_encoded_amino_acids>269</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RVELLFSDYMRSFRENMSDFLEAGSIVDIEVGLGPAGELRYPSYTQSQGWKFPGIGEFQCYDKYMRTDFKGAATKAGHSEWDLPDDAGTYNNVPAETGFFGPNGTYLTEKGKFFLTWYSSKLLLHGDQILDEANKAFLGCKVKLSAKVAGIHWWYKDASHAAELTAGFYNLDNRDGYRPIARMLSRHYGTFNFTCLEMRNSEHPAYAKSGPQELVQQVLSVGWKENIDVAGENALARYDGYAYNQILLNARPNGINKNGPPKLKMAGLT</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71400" stop="71591"/>
                    <exon start="72497" stop="72562"/>
                    <exon start="72658" stop="73057"/>
                    <exon start="73165" stop="73175"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>666</number_coding_nucleotides>
                  <number_encoded_amino_acids>222</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MNISTSSIGTSNLGVLPEVMGFPHQKLLIKKFHLARKQLLRQNITFSCNRKTGITRAIAPEATKVTGPTLSTVPLANYVPVYVMLPLDVISIDNVFRDQVKCEKQFKELREAGVDGIMVDVWWGIVEANGPGLYDWSAYRSLFQLVQKIGLKIQAIMSFHQCGGNIGDDVFIPIPKWVLAIGENNPDIFYTNRTGTRNKECLSLAVDNQPLFEGSNCYSATT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="71199" e_stop="71591"/>
            <exon e_start="72497" e_stop="72562"/>
            <exon e_start="72658" e_stop="73057"/>
            <exon e_start="73157" e_stop="73321"/>
            <exon e_start="73609" e_stop="73872"/>
            <exon e_start="73984" e_stop="74162"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="0.997"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.827" e_score="0.986"/>
          <exon-intron don_prob="0.932" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.835" e_score="0.996"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="71199" e_stop="71591" e_length="393"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="71592" i_stop="72496" i_length="905"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="72497" e_stop="72562" e_length="66"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="72563" i_stop="72657" i_length="95"/>
          </intron>
          <exon e_serial="3" e_score="0.986">
            <gDNA_exon_boundary e_start="72658" e_stop="73057" e_length="400"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.827">
            <gDNA_intron_boundary i_start="73058" i_stop="73156" i_length="99"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="73157" e_stop="73321" e_length="165"/>
          </exon>
          <intron i_serial="4" don_prob="0.932" acc_prob="0.999">
            <gDNA_intron_boundary i_start="73322" i_stop="73608" i_length="287"/>
          </intron>
          <exon e_serial="5" e_score="0.996">
            <gDNA_exon_boundary e_start="73609" e_stop="73872" e_length="264"/>
          </exon>
          <intron i_serial="5" don_prob="0.987" acc_prob="0.835">
            <gDNA_intron_boundary i_start="73873" i_stop="73983" i_length="111"/>
          </intron>
          <exon e_serial="6" e_score="0.989">
            <gDNA_exon_boundary e_start="73984" e_stop="74162" e_length="179"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71199" stop="71591"/>
              <exon start="72497" stop="72562"/>
              <exon start="72658" stop="72812"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262879" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72515" stop="72562"/>
              <exon start="72658" stop="73027"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355733" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72903" stop="73057"/>
              <exon start="73157" stop="73321"/>
              <exon start="73609" stop="73872"/>
              <exon start="73984" stop="74027"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342633" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73246" stop="73321"/>
              <exon start="73609" stop="73872"/>
              <exon start="73984" stop="74162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256751" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTTCAAAATCAAATTTTGGGATCCACACATATAAAAATATTGCAGTCCACAAAAAAGTGTTCCATAAGGATTATTTGATTCTTTGTGATGAATGTCTTTTACCTTAGATATTTTAAACATTTTTTCTTTTGCAATGTTGAAATTAATATTGTTGTAAATTTTTTAAAGCCCAGAAACAGGAAATTTGTTGATATTTTAGATGAATATCAGTACGTCTAGCATTGGAACTTCAAATTTAGGTGTTTTACCTGAGGTAATGGGATTTCCACACCAAAAATTGTTGATTAAGAAATTTCATTTGGCAAGAAAACAACTTCTCCGGCAAAATATTACATTTTCTTGTAATCGAAAGACTGGAATTACTCGAGCCATTGCACCAGAAGCAACAAAG : GTTACGGGTCCAACATTGAGCACTGTCCCTTTAGCCAACTATGTGCCTGTTTATGTAATGCTTCCA : TTAGATGTTATTTCAATTGACAATGTATTTCGGGACCAAGTTAAGTGTGAGAAGCAGTTCAAGGAACTGAGAGAAGCGGGTGTTGATGGGATCATGGTGGATGTCTGGTGGGGAATAGTAGAGGCCAATGGCCCCGGGCTATATGATTGGTCTGCGTATAGGAGTTTGTTCCAACTTGTTCAAAAGATTGGCCTCAAAATACAAGCTATTATGTCATTCCACCAATGTGGTGGCAATATAGGAGATGATGTTTTCATTCCTATACCCAAATGGGTACTAGCTATCGGAGAAAACAACCCTGATATTTTCTATACTAATCGGACTGGTACAAGGAACAAAGAATGCCTCTCACTTGCCGTGGATAACCAACCTCTATTTGAAGGGTCGAACTGCTATTCAG : ATTTACAGCGACTACATGAGGAGCTTTAGAGAGAACATGTCCGACTTCTTGGAAGCTGGAAGCATAGTAGACATAGAGGTAGGACTTGGTCCTGCCGGTGAGCTTAGATATCCATCGTACACTCAGTCTCAAGGATGGAAATTCCCCGGCATTGGAGAATTTCAG : TGCTATGACAAGTACATGAGAACAGATTTCAAGGGGGCAGCAACAAAGGCAGGCCACTCAGAGTGGGATCTTCCAGATGATGCAGGAACATATAATAATGTACCCGCCGAAACAGGATTCTTTGGACCAAATGGTACATACCTTACCGAGAAAGGGAAGTTCTTTTTGACCTGGTACTCTAGCAAGCTACTGCTTCACGGAGATCAGATCCTTGATGAAGCAAACAAAGCTTTCCTGGGATGCAAAGTGAAGCTATCAGCTAAA : GTAGCTGGAATTCACTGGTGGTACAAAGATGCCAGCCATGCTGCAGAGCTAACAGCGGGATTTTATAATTTGGACAATCGAGATGGCTATAGACCAATAGCAAGGATGTTATCGAGACACTATGGTACCTTTAATTTCACTTGCCTTGAGATGAGGAATTCAGAACATCCAGCTTATGC</gDNA_template>
            <first_frame> F  F  K  I  K  F  W  D  P  H  I  *  K  Y  C  S  P  Q  K  S  V  P  *  G  L  F  D  S  L  *  *  M  S  F  T  L  D  I  L  N  I  F  S  F  A  M  L  K  L  I  L  L  *  I  F  *  S  P  E  T  G  N  L  L  I  F  *  M  N  I  S  T  S  S  I  G  T  S  N  L  G  V  L  P  E  V  M  G  F  P  H  Q  K  L  L  I  K  K  F  H  L  A  R  K  Q  L  L  R  Q  N  I  T  F  S  C  N  R  K  T  G  I  T  R  A  I  A  P  E  A  T  K  :  V  T  G  P  T  L  S  T  V  P  L  A  N  Y  V  P  V  Y  V  M  L  P  :  L  D  V  I  S  I  D  N  V  F  R  D  Q  V  K  C  E  K  Q  F  K  E  L  R  E  A  G  V  D  G  I  M  V  D  V  W  W  G  I  V  E  A  N  G  P  G  L  Y  D  W  S  A  Y  R  S  L  F  Q  L  V  Q  K  I  G  L  K  I  Q  A  I  M  S  F  H  Q  C  G  G  N  I  G  D  D  V  F  I  P  I  P  K  W  V  L  A  I  G  E  N  N  P  D  I  F  Y  T  N  R  T  G  T  R  N  K  E  C  L  S  L  A  V  D  N  Q  P  L  F  E  G  S  N  C  Y  S   : D  L  Q  R  L  H  E  E  L  *  R  E  H  V  R  L  L  G  S  W  K  H  S  R  H  R  G  R  T  W  S  C  R  *  A  *  I  S  I  V  H  S  V  S  R  M  E  I  P  R  H  W  R  I  S   : V  L  *  Q  V  H  E  N  R  F  Q  G  G  S  N  K  G  R  P  L  R  V  G  S  S  R  *  C  R  N  I  *  *  C  T  R  R  N  R  I  L  W  T  K  W  Y  I  P  Y  R  E  R  E  V  L  F  D  L  V  L  *  Q  A  T  A  S  R  R  S  D  P  *  *  S  K  Q  S  F  P  G  M  Q  S  E  A  I  S  *   : S  S  W  N  S  L  V  V  Q  R  C  Q  P  C  C  R  A  N  S  G  I  L  *  F  G  Q  S  R  W  L  *  T  N  S  K  D  V  I  E  T  L  W  Y  L  *  F  H  L  P  *  D  E  E  F  R  T  S  S  L  C </first_frame>
            <second_frame>  F  S  K  S  N  F  G  I  H  T  Y  K  N  I  A  V  H  K  K  V  F  H  K  D  Y  L  I  L  C  D  E  C  L  L  P  *  I  F  *  T  F  F  L  L  Q  C  *  N  *  Y  C  C  K  F  F  K  A  Q  K  Q  E  I  C  *  Y  F  R  *  I  S  V  R  L  A  L  E  L  Q  I  *  V  F  Y  L  R  *  W  D  F  H  T  K  N  C  *  L  R  N  F  I  W  Q  E  N  N  F  S  G  K  I  L  H  F  L  V  I  E  R  L  E  L  L  E  P  L  H  Q  K  Q  Q  R :   L  R  V  Q  H  *  A  L  S  L  *  P  T  M  C  L  F  M  *  C  F  H :   *  M  L  F  Q  L  T  M  Y  F  G  T  K  L  S  V  R  S  S  S  R  N  *  E  K  R  V  L  M  G  S  W  W  M  S  G  G  E  *  *  R  P  M  A  P  G  Y  M  I  G  L  R  I  G  V  C  S  N  L  F  K  R  L  A  S  K  Y  K  L  L  C  H  S  T  N  V  V  A  I  *  E  M  M  F  S  F  L  Y  P  N  G  Y  *  L  S  E  K  T  T  L  I  F  S  I  L  I  G  L  V  Q  G  T  K  N  A  S  H  L  P  W  I  T  N  L  Y  L  K  G  R  T  A  I  Q  :  I  Y  S  D  Y  M  R  S  F  R  E  N  M  S  D  F  L  E  A  G  S  I  V  D  I  E  V  G  L  G  P  A  G  E  L  R  Y  P  S  Y  T  Q  S  Q  G  W  K  F  P  G  I  G  E  F  Q  :  C  Y  D  K  Y  M  R  T  D  F  K  G  A  A  T  K  A  G  H  S  E  W  D  L  P  D  D  A  G  T  Y  N  N  V  P  A  E  T  G  F  F  G  P  N  G  T  Y  L  T  E  K  G  K  F  F  L  T  W  Y  S  S  K  L  L  L  H  G  D  Q  I  L  D  E  A  N  K  A  F  L  G  C  K  V  K  L  S  A  K  :  V  A  G  I  H  W  W  Y  K  D  A  S  H  A  A  E  L  T  A  G  F  Y  N  L  D  N  R  D  G  Y  R  P  I  A  R  M  L  S  R  H  Y  G  T  F  N  F  T  C  L  E  M  R  N  S  E  H  P  A  Y   </second_frame>
            <third_frame>   F  Q  N  Q  I  L  G  S  T  H  I  K  I  L  Q  S  T  K  K  C  S  I  R  I  I  *  F  F  V  M  N  V  F  Y  L  R  Y  F  K  H  F  F  F  C  N  V  E  I  N  I  V  V  N  F  L  K  P  R  N  R  K  F  V  D  I  L  D  E  Y  Q  Y  V  *  H  W  N  F  K  F  R  C  F  T  *  G  N  G  I  S  T  P  K  I  V  D  *  E  I  S  F  G  K  K  T  T  S  P  A  K  Y  Y  I  F  L  *  S  K  D  W  N  Y  S  S  H  C  T  R  S  N  K   : G  Y  G  S  N  I  E  H  C  P  F  S  Q  L  C  A  C  L  C  N  A  S   : I  R  C  Y  F  N  *  Q  C  I  S  G  P  S  *  V  *  E  A  V  Q  G  T  E  R  S  G  C  *  W  D  H  G  G  C  L  V  G  N  S  R  G  Q  W  P  R  A  I  *  L  V  C  V  *  E  F  V  P  T  C  S  K  D  W  P  Q  N  T  S  Y  Y  V  I  P  P  M  W  W  Q  Y  R  R  *  C  F  H  S  Y  T  Q  M  G  T  S  Y  R  R  K  Q  P  *  Y  F  L  Y  *  S  D  W  Y  K  E  Q  R  M  P  L  T  C  R  G  *  P  T  S  I  *  R  V  E  L  L  F  R :   F  T  A  T  T  *  G  A  L  E  R  T  C  P  T  S  W  K  L  E  A  *  *  T  *  R  *  D  L  V  L  P  V  S  L  D  I  H  R  T  L  S  L  K  D  G  N  S  P  A  L  E  N  F  S :   A  M  T  S  T  *  E  Q  I  S  R  G  Q  Q  Q  R  Q  A  T  Q  S  G  I  F  Q  M  M  Q  E  H  I  I  M  Y  P  P  K  Q  D  S  L  D  Q  M  V  H  T  L  P  R  K  G  S  S  F  *  P  G  T  L  A  S  Y  C  F  T  E  I  R  S  L  M  K  Q  T  K  L  S  W  D  A  K  *  S  Y  Q  L  K :   *  L  E  F  T  G  G  T  K  M  P  A  M  L  Q  S  *  Q  R  D  F  I  I  W  T  I  E  M  A  I  D  Q  *  Q  G  C  Y  R  D  T  M  V  P  L  I  S  L  A  L  R  *  G  I  Q  N  I  Q  L  M  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="72938" stop="73057"/>
                    <exon start="73157" stop="73321"/>
                    <exon start="73609" stop="73872"/>
                    <exon start="73984" stop="74160"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>726</number_coding_nucleotides>
                  <number_encoded_amino_acids>242</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSEKTTLIFSILIGLVQGTKNASHLPWITNLYLKGRTAIQIYSDYMRSFRENMSDFLEAGSIVDIEVGLGPAGELRYPSYTQSQGWKFPGIGEFQCYDKYMRTDFKGAATKAGHSEWDLPDDAGTYNNVPAETGFFGPNGTYLTEKGKFFLTWYSSKLLLHGDQILDEANKAFLGCKVKLSAKVAGIHWWYKDASHAAELTAGFYNLDNRDGYRPIARMLSRHYGTFNFTCLEMRNSEHPAY</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71400" stop="71591"/>
                    <exon start="72497" stop="72562"/>
                    <exon start="72658" stop="73057"/>
                    <exon start="73157" stop="73185"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>684</number_coding_nucleotides>
                  <number_encoded_amino_acids>228</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MNISTSSIGTSNLGVLPEVMGFPHQKLLIKKFHLARKQLLRQNITFSCNRKTGITRAIAPEATKVTGPTLSTVPLANYVPVYVMLPLDVISIDNVFRDQVKCEKQFKELREAGVDGIMVDVWWGIVEANGPGLYDWSAYRSLFQLVQKIGLKIQAIMSFHQCGGNIGDDVFIPIPKWVLAIGENNPDIFYTNRTGTRNKECLSLAVDNQPLFEGSNCYSDLQRLHEEL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="71233" e_stop="71838"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="71233" e_stop="71838" e_length="606"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71233" stop="71838"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248832" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71233" stop="71834"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369565" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAAATATTGCAGTCCACAAAAAAGTGTTCCATAAGGATTATTTGATTCTTTGTGATGAATGTCTTTTACCTTAGATATTTTAAACATTTTTTCTTTTGCAATGTTGAAATTAATATTGTTGTAAATTTTTTAAAGCCCAGAAACAGGAAATTTGTTGATATTTTAGATGAATATCAGTACGTCTAGCATTGGAACTTCAAATTTAGGTGTTTTACCTGAGGTAATGGGATTTCCACACCAAAAATTGTTGATTAAGAAATTTCATTTGGCAAGAAAACAACTTCTCCGGCAAAATATTACATTTTCTTGTAATCGAAAGACTGGAATTACTCGAGCCATTGCACCAGAAGCAACAAAGGTAATAAATTTTCCTCTGTTCTTTTAATTTGGAGTCTTTTGTGTGCCTGTTTTGTTGAGAGGTGATTAGACAGCACACAGCATAACTGTGTGAGGATATGACCTAGATAGGAGTTTTTGGATGTTGAGGATTAGGTAAAAAGATTAGTAGCTAGTCGAGCATCGTCTAGTTTACCTTCTATGTTTTGTTATTATTGATTTCTTAATATTTCACTCTTCGATTGTAGTATTACATGTTGTTTTCTTTG</gDNA_template>
            <first_frame> K  N  I  A  V  H  K  K  V  F  H  K  D  Y  L  I  L  C  D  E  C  L  L  P  *  I  F  *  T  F  F  L  L  Q  C  *  N  *  Y  C  C  K  F  F  K  A  Q  K  Q  E  I  C  *  Y  F  R  *  I  S  V  R  L  A  L  E  L  Q  I  *  V  F  Y  L  R  *  W  D  F  H  T  K  N  C  *  L  R  N  F  I  W  Q  E  N  N  F  S  G  K  I  L  H  F  L  V  I  E  R  L  E  L  L  E  P  L  H  Q  K  Q  Q  R  *  *  I  F  L  C  S  F  N  L  E  S  F  V  C  L  F  C  *  E  V  I  R  Q  H  T  A  *  L  C  E  D  M  T  *  I  G  V  F  G  C  *  G  L  G  K  K  I  S  S  *  S  S  I  V  *  F  T  F  Y  V  L  L  L  L  I  S  *  Y  F  T  L  R  L  *  Y  Y  M  L  F  S  L </first_frame>
            <second_frame>  K  I  L  Q  S  T  K  K  C  S  I  R  I  I  *  F  F  V  M  N  V  F  Y  L  R  Y  F  K  H  F  F  F  C  N  V  E  I  N  I  V  V  N  F  L  K  P  R  N  R  K  F  V  D  I  L  D  E  Y  Q  Y  V  *  H  W  N  F  K  F  R  C  F  T  *  G  N  G  I  S  T  P  K  I  V  D  *  E  I  S  F  G  K  K  T  T  S  P  A  K  Y  Y  I  F  L  *  S  K  D  W  N  Y  S  S  H  C  T  R  S  N  K  G  N  K  F  S  S  V  L  L  I  W  S  L  L  C  A  C  F  V  E  R  *  L  D  S  T  Q  H  N  C  V  R  I  *  P  R  *  E  F  L  D  V  E  D  *  V  K  R  L  V  A  S  R  A  S  S  S  L  P  S  M  F  C  Y  Y  *  F  L  N  I  S  L  F  D  C  S  I  T  C  C  F  L   </second_frame>
            <third_frame>   K  Y  C  S  P  Q  K  S  V  P  *  G  L  F  D  S  L  *  *  M  S  F  T  L  D  I  L  N  I  F  S  F  A  M  L  K  L  I  L  L  *  I  F  *  S  P  E  T  G  N  L  L  I  F  *  M  N  I  S  T  S  S  I  G  T  S  N  L  G  V  L  P  E  V  M  G  F  P  H  Q  K  L  L  I  K  K  F  H  L  A  R  K  Q  L  L  R  Q  N  I  T  F  S  C  N  R  K  T  G  I  T  R  A  I  A  P  E  A  T  K  V  I  N  F  P  L  F  F  *  F  G  V  F  C  V  P  V  L  L  R  G  D  *  T  A  H  S  I  T  V  *  G  Y  D  L  D  R  S  F  W  M  L  R  I  R  *  K  D  *  *  L  V  E  H  R  L  V  Y  L  L  C  F  V  I  I  D  F  L  I  F  H  S  S  I  V  V  L  H  V  V  F  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71400" stop="71618"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MNISTSSIGTSNLGVLPEVMGFPHQKLLIKKFHLARKQLLRQNITFSCNRKTGITRAIAPEATKVINFPLFF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="84114" PGL_stop="90373"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="84114" e_stop="84345"/>
            <exon e_start="88008" e_stop="88211"/>
            <exon e_start="88305" e_stop="88352"/>
            <exon e_start="88463" e_stop="88487"/>
            <exon e_start="88585" e_stop="88646"/>
            <exon e_start="88834" e_stop="88840"/>
            <exon e_start="88968" e_stop="89029"/>
            <exon e_start="89121" e_stop="89220"/>
            <exon e_start="89342" e_stop="89392"/>
            <exon e_start="89489" e_stop="89516"/>
            <exon e_start="90184" e_stop="90373"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.945" acc_prob="0.728" e_score="1.000"/>
          <exon-intron don_prob="0.965" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.698" acc_prob="0.795" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.942" acc_prob="0.753" e_score="1.000"/>
          <exon-intron don_prob="0.971" acc_prob="0.958" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="84114" e_stop="84345" e_length="232"/>
          </exon>
          <intron i_serial="1" don_prob="0.945" acc_prob="0.728">
            <gDNA_intron_boundary i_start="84346" i_stop="88007" i_length="3662"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="88008" e_stop="88211" e_length="204"/>
          </exon>
          <intron i_serial="2" don_prob="0.965" acc_prob="0.997">
            <gDNA_intron_boundary i_start="88212" i_stop="88304" i_length="93"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="88305" e_stop="88352" e_length="48"/>
          </exon>
          <intron i_serial="3" don_prob="0.985" acc_prob="0.000">
            <gDNA_intron_boundary i_start="88353" i_stop="88462" i_length="110"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="88463" e_stop="88487" e_length="25"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.000">
            <gDNA_intron_boundary i_start="88488" i_stop="88584" i_length="97"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="88585" e_stop="88646" e_length="62"/>
          </exon>
          <intron i_serial="5" don_prob="0.698" acc_prob="0.795">
            <gDNA_intron_boundary i_start="88647" i_stop="88833" i_length="187"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="88834" e_stop="88840" e_length="7"/>
          </exon>
          <intron i_serial="6" don_prob="0.989" acc_prob="1.000">
            <gDNA_intron_boundary i_start="88841" i_stop="88967" i_length="127"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="88968" e_stop="89029" e_length="62"/>
          </exon>
          <intron i_serial="7" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="89030" i_stop="89120" i_length="91"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="89121" e_stop="89220" e_length="100"/>
          </exon>
          <intron i_serial="8" don_prob="0.942" acc_prob="0.753">
            <gDNA_intron_boundary i_start="89221" i_stop="89341" i_length="121"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="89342" e_stop="89392" e_length="51"/>
          </exon>
          <intron i_serial="9" don_prob="0.971" acc_prob="0.958">
            <gDNA_intron_boundary i_start="89393" i_stop="89488" i_length="96"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="89489" e_stop="89516" e_length="28"/>
          </exon>
          <intron i_serial="10" don_prob="0.989" acc_prob="1.000">
            <gDNA_intron_boundary i_start="89517" i_stop="90183" i_length="667"/>
          </intron>
          <exon e_serial="11" e_score="0.989">
            <gDNA_exon_boundary e_start="90184" e_stop="90373" e_length="190"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84114" stop="84345"/>
              <exon start="88008" stop="88211"/>
              <exon start="88305" stop="88344"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273681" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84157" stop="84345"/>
              <exon start="88008" stop="88211"/>
              <exon start="88305" stop="88352"/>
              <exon start="88463" stop="88487"/>
              <exon start="88585" stop="88646"/>
              <exon start="88834" stop="88840"/>
              <exon start="88968" stop="89029"/>
              <exon start="89121" stop="89220"/>
              <exon start="89342" stop="89392"/>
              <exon start="89489" stop="89516"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E689255" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84159" stop="84345"/>
              <exon start="88008" stop="88211"/>
              <exon start="88305" stop="88352"/>
              <exon start="88463" stop="88487"/>
              <exon start="88585" stop="88646"/>
              <exon start="88834" stop="88840"/>
              <exon start="88968" stop="89029"/>
              <exon start="89121" stop="89220"/>
              <exon start="89342" stop="89392"/>
              <exon start="89489" stop="89516"/>
              <exon start="90184" stop="90291"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E699721" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84160" stop="84345"/>
              <exon start="88008" stop="88211"/>
              <exon start="88305" stop="88352"/>
              <exon start="88463" stop="88487"/>
              <exon start="88585" stop="88618"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325179" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84163" stop="84345"/>
              <exon start="88008" stop="88203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325031" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84217" stop="84345"/>
              <exon start="88008" stop="88211"/>
              <exon start="88305" stop="88352"/>
              <exon start="88463" stop="88487"/>
              <exon start="88585" stop="88646"/>
              <exon start="88834" stop="88840"/>
              <exon start="88968" stop="89029"/>
              <exon start="89121" stop="89220"/>
              <exon start="89342" stop="89392"/>
              <exon start="89489" stop="89516"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698758" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84227" stop="84345"/>
              <exon start="88008" stop="88211"/>
              <exon start="88305" stop="88352"/>
              <exon start="88463" stop="88487"/>
              <exon start="88585" stop="88617"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E299451" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84257" stop="84345"/>
              <exon start="88008" stop="88211"/>
              <exon start="88305" stop="88352"/>
              <exon start="88463" stop="88487"/>
              <exon start="88585" stop="88646"/>
              <exon start="88834" stop="88840"/>
              <exon start="88968" stop="89029"/>
              <exon start="89121" stop="89220"/>
              <exon start="89342" stop="89392"/>
              <exon start="89489" stop="89516"/>
              <exon start="90184" stop="90373"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E705189" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATTCATTTTGCTTCACTCTAATACACTAAACTAGAAGCTTCTCTCTAAAACTCACATGCAGTGGATCGGAAAAAGTTCCACTGCTGTTTTCATCTCCAAAGCTAAGGCGAAAATATTAGAATTTTTCATCTAAAAGCTCCCAAGCTAACTTCATGCTTCTCTCCAAGCGATTTTTTTCGAAGTAGAGTACTACGGATCCAAAAGATTTCATTTCAATCTACCAAAATCAAG : TTCTAGTTTGCATCTTCTCATGGGTCGCAATAAGATTGTGATGAAGAAAATTGAGGATTCAACATCCCGTAAACAGTTCTATTCAAATCGCAAGGATAGCATTGTGAAGAAGTCAAATGAGCTGGCGGTTGTATGTGGTACAGATGTGGGGTTGTTGATGTTTTCTCCATCTGGTCAGCTGACTACCTATTCTAGCAAAGAAAG : TATTGAGGACATCATGATCGAAGCTATGAACAAGTCTGTGAATCCGCG : ACCCATACCAAATCTAAATGAACAG : CTTTTGATGCAGAGTCTCAAACAGTCAAAATCTGAAGGCCAAATGGTTGGAAAAATAGCTAT : TGCTGAG : GCTCATGAGAAGAAGCTTAATGAGCTCAAAGAAACACTAAGGGAGGCACAACAGAAAATAAG : GTATTGCAATCCGCAAGTGGAGAATATCAGCTCAGTCCAAGAAGCTGAAGCATATGAGCAGTTCCTTAGGAGTAATATGGAACAGATTCAACAATCAAAA : GCAAAACTCTTAGGTGTCCAAGGATTAGTCCATAGAAATGAATATCCTGCG : GTCAACACAGAGGATACGGCTGCTGCAG : GAACCAGTAGTGGATGGATGTTTTGAGGAATCAGGCCGGATCGCGGTGGAGAAGTAGCTGCGGGTGTCCAACAGCTGCAGCAGAAATATAATTATGTTATATTAAGAACTTAGTAGAATAAATAACTTGCACCAATCAAGCATGCAAAAGTATGAATAATGTTGCATCTGACTATTGTGAATTCAACTTT</gDNA_template>
            <first_frame> N  S  F  C  F  T  L  I  H  *  T  R  S  F  S  L  K  L  T  C  S  G  S  E  K  V  P  L  L  F  S  S  P  K  L  R  R  K  Y  *  N  F  S  S  K  S  S  Q  A  N  F  M  L  L  S  K  R  F  F  S  K  *  S  T  T  D  P  K  D  F  I  S  I  Y  Q  N  Q   : V  L  V  C  I  F  S  W  V  A  I  R  L  *  *  R  K  L  R  I  Q  H  P  V  N  S  S  I  Q  I  A  R  I  A  L  *  R  S  Q  M  S  W  R  L  Y  V  V  Q  M  W  G  C  *  C  F  L  H  L  V  S  *  L  P  I  L  A  K  K   : V  L  R  T  S  *  S  K  L  *  T  S  L  *  I  R   : D  P  Y  Q  I  *  M  N  S :   F  *  C  R  V  S  N  S  Q  N  L  K  A  K  W  L  E  K  *  L   : L  L  R :   L  M  R  R  S  L  M  S  S  K  K  H  *  G  R  H  N  R  K  *   : G  I  A  I  R  K  W  R  I  S  A  Q  S  K  K  L  K  H  M  S  S  S  L  G  V  I  W  N  R  F  N  N  Q  K :   Q  N  S  *  V  S  K  D  *  S  I  E  M  N  I  L  R :   S  T  Q  R  I  R  L  L  Q  :  E  P  V  V  D  G  C  F  E  E  S  G  R  I  A  V  E  K  *  L  R  V  S  N  S  C  S  R  N  I  I  M  L  Y  *  E  L  S  R  I  N  N  L  H  Q  S  S  M  Q  K  Y  E  *  C  C  I  *  L  L  *  I  Q  L  </first_frame>
            <second_frame>  I  H  F  A  S  L  *  Y  T  K  L  E  A  S  L  *  N  S  H  A  V  D  R  K  K  F  H  C  C  F  H  L  Q  S  *  G  E  N  I  R  I  F  H  L  K  A  P  K  L  T  S  C  F  S  P  S  D  F  F  R  S  R  V  L  R  I  Q  K  I  S  F  Q  S  T  K  I  K  :  F  *  F  A  S  S  H  G  S  Q  *  D  C  D  E  E  N  *  G  F  N  I  P  *  T  V  L  F  K  S  Q  G  *  H  C  E  E  V  K  *  A  G  G  C  M  W  Y  R  C  G  V  V  D  V  F  S  I  W  S  A  D  Y  L  F  *  Q  R  K  :  Y  *  G  H  H  D  R  S  Y  E  Q  V  C  E  S  A  :  T  H  T  K  S  K  *  T   : A  F  D  A  E  S  Q  T  V  K  I  *  R  P  N  G  W  K  N  S  Y  :  C  *   : G  S  *  E  E  A  *  *  A  Q  R  N  T  K  G  G  T  T  E  N  K  :  V  L  Q  S  A  S  G  E  Y  Q  L  S  P  R  S  *  S  I  *  A  V  P  *  E  *  Y  G  T  D  S  T  I  K   : S  K  T  L  R  C  P  R  I  S  P  *  K  *  I  S  C   : G  Q  H  R  G  Y  G  C  C  R :   N  Q  *  W  M  D  V  L  R  N  Q  A  G  S  R  W  R  S  S  C  G  C  P  T  A  A  A  E  I  *  L  C  Y  I  K  N  L  V  E  *  I  T  C  T  N  Q  A  C  K  S  M  N  N  V  A  S  D  Y  C  E  F  N  F </second_frame>
            <third_frame>   F  I  L  L  H  S  N  T  L  N  *  K  L  L  S  K  T  H  M  Q  W  I  G  K  S  S  T  A  V  F  I  S  K  A  K  A  K  I  L  E  F  F  I  *  K  L  P  S  *  L  H  A  S  L  Q  A  I  F  F  E  V  E  Y  Y  G  S  K  R  F  H  F  N  L  P  K  S  S :   S  S  L  H  L  L  M  G  R  N  K  I  V  M  K  K  I  E  D  S  T  S  R  K  Q  F  Y  S  N  R  K  D  S  I  V  K  K  S  N  E  L  A  V  V  C  G  T  D  V  G  L  L  M  F  S  P  S  G  Q  L  T  T  Y  S  S  K  E  S :   I  E  D  I  M  I  E  A  M  N  K  S  V  N  P  R :   P  I  P  N  L  N  E  Q  :  L  L  M  Q  S  L  K  Q  S  K  S  E  G  Q  M  V  G  K  I  A  I :   A  E  :  A  H  E  K  K  L  N  E  L  K  E  T  L  R  E  A  Q  Q  K  I  R :   Y  C  N  P  Q  V  E  N  I  S  S  V  Q  E  A  E  A  Y  E  Q  F  L  R  S  N  M  E  Q  I  Q  Q  S  K  :  A  K  L  L  G  V  Q  G  L  V  H  R  N  E  Y  P  A  :  V  N  T  E  D  T  A  A  A   : G  T  S  S  G  W  M  F  *  G  I  R  P  D  R  G  G  E  V  A  A  G  V  Q  Q  L  Q  Q  K  Y  N  Y  V  I  L  R  T  *  *  N  K  *  L  A  P  I  K  H  A  K  V  *  I  M  L  H  L  T  I  V  N  S  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="84263" stop="84345"/>
                    <exon start="88008" stop="88211"/>
                    <exon start="88305" stop="88352"/>
                    <exon start="88463" stop="88487"/>
                    <exon start="88585" stop="88646"/>
                    <exon start="88834" stop="88840"/>
                    <exon start="88968" stop="89029"/>
                    <exon start="89121" stop="89220"/>
                    <exon start="89342" stop="89392"/>
                    <exon start="89489" stop="89516"/>
                    <exon start="90184" stop="90209"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>693</number_coding_nucleotides>
                  <number_encoded_amino_acids>231</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LHASLQAIFFEVEYYGSKRFHFNLPKSSSSLHLLMGRNKIVMKKIEDSTSRKQFYSNRKDSIVKKSNELAVVCGTDVGLLMFSPSGQLTTYSSKESIEDIMIEAMNKSVNPRPIPNLNEQLLMQSLKQSKSEGQMVGKIAIAEAHEKKLNELKETLREAQQKIRYCNPQVENISSVQEAEAYEQFLRSNMEQIQQSKAKLLGVQGLVHRNEYPAVNTEDTAAAGTSSGWMF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="91611" PGL_stop="105572"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="103449" e_stop="103517"/>
            <exon e_start="103666" e_stop="103837"/>
            <exon e_start="103922" e_stop="103975"/>
            <exon e_start="104073" e_stop="104097"/>
            <exon e_start="104174" e_stop="104235"/>
            <exon e_start="104431" e_stop="104437"/>
            <exon e_start="104542" e_stop="104603"/>
            <exon e_start="104706" e_stop="104805"/>
            <exon e_start="104887" e_stop="104937"/>
            <exon e_start="105017" e_stop="105053"/>
            <exon e_start="105314" e_stop="105572"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.978" acc_prob="0.000" e_score="0.565"/>
          <exon-intron don_prob="0.994" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.553" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.967" acc_prob="0.377" e_score="1.000"/>
          <exon-intron don_prob="0.926" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.866" acc_prob="0.855" e_score="1.000"/>
          <exon-intron don_prob="0.979" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.894" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.565">
            <gDNA_exon_boundary e_start="103449" e_stop="103517" e_length="69"/>
          </exon>
          <intron i_serial="1" don_prob="0.978" acc_prob="0.000">
            <gDNA_intron_boundary i_start="103518" i_stop="103665" i_length="148"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="103666" e_stop="103837" e_length="172"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="1.000">
            <gDNA_intron_boundary i_start="103838" i_stop="103921" i_length="84"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="103922" e_stop="103975" e_length="54"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.990">
            <gDNA_intron_boundary i_start="103976" i_stop="104072" i_length="97"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="104073" e_stop="104097" e_length="25"/>
          </exon>
          <intron i_serial="4" don_prob="0.553" acc_prob="0.997">
            <gDNA_intron_boundary i_start="104098" i_stop="104173" i_length="76"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="104174" e_stop="104235" e_length="62"/>
          </exon>
          <intron i_serial="5" don_prob="0.967" acc_prob="0.377">
            <gDNA_intron_boundary i_start="104236" i_stop="104430" i_length="195"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="104431" e_stop="104437" e_length="7"/>
          </exon>
          <intron i_serial="6" don_prob="0.926" acc_prob="1.000">
            <gDNA_intron_boundary i_start="104438" i_stop="104541" i_length="104"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="104542" e_stop="104603" e_length="62"/>
          </exon>
          <intron i_serial="7" don_prob="0.866" acc_prob="0.855">
            <gDNA_intron_boundary i_start="104604" i_stop="104705" i_length="102"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="104706" e_stop="104805" e_length="100"/>
          </exon>
          <intron i_serial="8" don_prob="0.979" acc_prob="0.972">
            <gDNA_intron_boundary i_start="104806" i_stop="104886" i_length="81"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="104887" e_stop="104937" e_length="51"/>
          </exon>
          <intron i_serial="9" don_prob="0.894" acc_prob="1.000">
            <gDNA_intron_boundary i_start="104938" i_stop="105016" i_length="79"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="105017" e_stop="105053" e_length="37"/>
          </exon>
          <intron i_serial="10" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="105054" i_stop="105313" i_length="260"/>
          </intron>
          <exon e_serial="11" e_score="0.992">
            <gDNA_exon_boundary e_start="105314" e_stop="105572" e_length="259"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103449" stop="103517"/>
              <exon start="103666" stop="103837"/>
              <exon start="103922" stop="103975"/>
              <exon start="104073" stop="104097"/>
              <exon start="104174" stop="104235"/>
              <exon start="104431" stop="104437"/>
              <exon start="104542" stop="104576"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338846" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103456" stop="103517"/>
              <exon start="103666" stop="103837"/>
              <exon start="103922" stop="103975"/>
              <exon start="104073" stop="104097"/>
              <exon start="104174" stop="104235"/>
              <exon start="104431" stop="104437"/>
              <exon start="104542" stop="104603"/>
              <exon start="104706" stop="104791"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337626" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104196" stop="104235"/>
              <exon start="104431" stop="104437"/>
              <exon start="104542" stop="104603"/>
              <exon start="104706" stop="104805"/>
              <exon start="104887" stop="104937"/>
              <exon start="105017" stop="105053"/>
              <exon start="105314" stop="105572"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375058" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAGATATGTCAATTGAATGGAAAAGTAATTAAGGATAGCGCGAGTATTAGATTGCGAGTGTTTTGACTT : AGCTTGTGATGAAGAAAATTGAGGATCCAACATCCCGTCAACAGTTCTATTCAAAGCGCAAGGATACCATCCTTAAGAAGTCCAATGAGTTGGCTGTTTTATGTGATGTGGATGTTGGTCTTCTAATGTTTTCTCCAGCCGGCGAAGTGACTAGCTATTCTAGCAAAGAACG : TCTTGAGGATGTCATGCTCCTTGCTATGAACAAGGCTGGTGAACTGAACAAGCT : ATCTCCTGAAAATCCAAATGAACAG : GCTTTGATGGACTCTCTCACACAATCAAAACATGAAGCCGAAATGGTGGAGAAGATAGCGAT : TGTTGAG : GCTCATGAGGAGAAGCTTAATGGGGTCAAAGAAAGACTAAGTGAAGCACAACAGAAAATAAG : GTATTACGAACCACAAGTGGAGAGTATCAACTCTGTCCAAGAAGCTGATGCATATGAGAAGTTCATTTTGAGTGCTCTGGAACTGATTCAACTATCAAAG : GCAAAACTCTTGGGTGACCAGGAATTTCTCCAGAGAAATGAAAATGTTGCG : GTGTCTTCTGTCAACGCAGAGGCTATGGCTGCTGAAG : GAACCAGTGGGGGATGGATGTATTGAGGAAACAGGCCGGATCACGGCGGGGAAGTAGCTGAGGATGTCCAACAGCTATAGCAGGAATAATAGTTATACTAGTTTATAGGTTAAGAACTTAGTAGAATAAATAACTTGCCCCTATCAGGCAAGCAAAAGTATGAATAATGTTGCATTTGTCTATTGTGAATGCAACTATTTGAATATGGCATCTGAATATGGCATCAAAACATAGCTATTGTGTTTTGAAATAGAAAACA</gDNA_template>
            <first_frame> *  I  C  Q  L  N  G  K  V  I  K  D  S  A  S  I  R  L  R  V  F  *  L  :  S  L  *  *  R  K  L  R  I  Q  H  P  V  N  S  S  I  Q  S  A  R  I  P  S  L  R  S  P  M  S  W  L  F  Y  V  M  W  M  L  V  F  *  C  F  L  Q  P  A  K  *  L  A  I  L  A  K  N   : V  L  R  M  S  C  S  L  L  *  T  R  L  V  N  *  T  S   : Y  L  L  K  I  Q  M  N  R :   L  *  W  T  L  S  H  N  Q  N  M  K  P  K  W  W  R  R  *  R   : L  L  R :   L  M  R  R  S  L  M  G  S  K  K  D  *  V  K  H  N  R  K  *   : G  I  T  N  H  K  W  R  V  S  T  L  S  K  K  L  M  H  M  R  S  S  F  *  V  L  W  N  *  F  N  Y  Q  R :   Q  N  S  W  V  T  R  N  F  S  R  E  M  K  M  L  R :   C  L  L  S  T  Q  R  L  W  L  L  K  :  E  P  V  G  D  G  C  I  E  E  T  G  R  I  T  A  G  K  *  L  R  M  S  N  S  Y  S  R  N  N  S  Y  T  S  L  *  V  K  N  L  V  E  *  I  T  C  P  Y  Q  A  S  K  S  M  N  N  V  A  F  V  Y  C  E  C  N  Y  L  N  M  A  S  E  Y  G  I  K  T  *  L  L  C  F  E  I  E  N  </first_frame>
            <second_frame>  R  Y  V  N  *  M  E  K  *  L  R  I  A  R  V  L  D  C  E  C  F  D  L :   A  C  D  E  E  N  *  G  S  N  I  P  S  T  V  L  F  K  A  Q  G  Y  H  P  *  E  V  Q  *  V  G  C  F  M  *  C  G  C  W  S  S  N  V  F  S  S  R  R  S  D  *  L  F  *  Q  R  T  :  S  *  G  C  H  A  P  C  Y  E  Q  G  W  *  T  E  Q  A  :  I  S  *  K  S  K  *  T   : G  F  D  G  L  S  H  T  I  K  T  *  S  R  N  G  G  E  D  S  D  :  C  *   : G  S  *  G  E  A  *  W  G  Q  R  K  T  K  *  S  T  T  E  N  K  :  V  L  R  T  T  S  G  E  Y  Q  L  C  P  R  S  *  C  I  *  E  V  H  F  E  C  S  G  T  D  S  T  I  K   : G  K  T  L  G  *  P  G  I  S  P  E  K  *  K  C  C   : G  V  F  C  Q  R  R  G  Y  G  C  *  R :   N  Q  W  G  M  D  V  L  R  K  Q  A  G  S  R  R  G  S  S  *  G  C  P  T  A  I  A  G  I  I  V  I  L  V  Y  R  L  R  T  *  *  N  K  *  L  A  P  I  R  Q  A  K  V  *  I  M  L  H  L  S  I  V  N  A  T  I  *  I  W  H  L  N  M  A  S  K  H  S  Y  C  V  L  K  *  K  T </second_frame>
            <third_frame>   D  M  S  I  E  W  K  S  N  *  G  *  R  E  Y  *  I  A  S  V  L  T   : *  L  V  M  K  K  I  E  D  P  T  S  R  Q  Q  F  Y  S  K  R  K  D  T  I  L  K  K  S  N  E  L  A  V  L  C  D  V  D  V  G  L  L  M  F  S  P  A  G  E  V  T  S  Y  S  S  K  E  R :   L  E  D  V  M  L  L  A  M  N  K  A  G  E  L  N  K  L :   S  P  E  N  P  N  E  Q  :  A  L  M  D  S  L  T  Q  S  K  H  E  A  E  M  V  E  K  I  A  I :   V  E  :  A  H  E  E  K  L  N  G  V  K  E  R  L  S  E  A  Q  Q  K  I  R :   Y  Y  E  P  Q  V  E  S  I  N  S  V  Q  E  A  D  A  Y  E  K  F  I  L  S  A  L  E  L  I  Q  L  S  K  :  A  K  L  L  G  D  Q  E  F  L  Q  R  N  E  N  V  A  :  V  S  S  V  N  A  E  A  M  A  A  E   : G  T  S  G  G  W  M  Y  *  G  N  R  P  D  H  G  G  E  V  A  E  D  V  Q  Q  L  *  Q  E  *  *  L  Y  *  F  I  G  *  E  L  S  R  I  N  N  L  P  L  S  G  K  Q  K  Y  E  *  C  C  I  C  L  L  *  M  Q  L  F  E  Y  G  I  *  I  W  H  Q  N  I  A  I  V  F  *  N  R  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="103668" stop="103837"/>
                    <exon start="103922" stop="103975"/>
                    <exon start="104073" stop="104097"/>
                    <exon start="104174" stop="104235"/>
                    <exon start="104431" stop="104437"/>
                    <exon start="104542" stop="104603"/>
                    <exon start="104706" stop="104805"/>
                    <exon start="104887" stop="104937"/>
                    <exon start="105017" stop="105053"/>
                    <exon start="105314" stop="105339"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>591</number_coding_nucleotides>
                  <number_encoded_amino_acids>197</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LVMKKIEDPTSRQQFYSKRKDTILKKSNELAVLCDVDVGLLMFSPAGEVTSYSSKERLEDVMLLAMNKAGELNKLSPENPNEQALMDSLTQSKHEAEMVEKIAIVEAHEEKLNGVKERLSEAQQKIRYYEPQVESINSVQEADAYEKFILSALELIQLSKAKLLGDQEFLQRNENVAVSSVNAEAMAAEGTSGGWMY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="92475" e_stop="92608"/>
            <exon e_start="92700" e_stop="92846"/>
            <exon e_start="103668" e_stop="103837"/>
            <exon e_start="103922" e_stop="103975"/>
            <exon e_start="104073" e_stop="104097"/>
            <exon e_start="104174" e_stop="104235"/>
            <exon e_start="104431" e_stop="104437"/>
            <exon e_start="104542" e_stop="104603"/>
            <exon e_start="104706" e_stop="104805"/>
            <exon e_start="104887" e_stop="104937"/>
            <exon e_start="105017" e_stop="105053"/>
            <exon e_start="105314" e_stop="105572"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.957" acc_prob="0.884" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.553" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.967" acc_prob="0.377" e_score="1.000"/>
          <exon-intron don_prob="0.926" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.866" acc_prob="0.855" e_score="1.000"/>
          <exon-intron don_prob="0.979" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.894" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="92475" e_stop="92608" e_length="134"/>
          </exon>
          <intron i_serial="1" don_prob="0.957" acc_prob="0.884">
            <gDNA_intron_boundary i_start="92609" i_stop="92699" i_length="91"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="92700" e_stop="92846" e_length="147"/>
          </exon>
          <intron i_serial="2" don_prob="0.985" acc_prob="0.000">
            <gDNA_intron_boundary i_start="92847" i_stop="103667" i_length="10821"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="103668" e_stop="103837" e_length="170"/>
          </exon>
          <intron i_serial="3" don_prob="0.994" acc_prob="1.000">
            <gDNA_intron_boundary i_start="103838" i_stop="103921" i_length="84"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="103922" e_stop="103975" e_length="54"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.990">
            <gDNA_intron_boundary i_start="103976" i_stop="104072" i_length="97"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="104073" e_stop="104097" e_length="25"/>
          </exon>
          <intron i_serial="5" don_prob="0.553" acc_prob="0.997">
            <gDNA_intron_boundary i_start="104098" i_stop="104173" i_length="76"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="104174" e_stop="104235" e_length="62"/>
          </exon>
          <intron i_serial="6" don_prob="0.967" acc_prob="0.377">
            <gDNA_intron_boundary i_start="104236" i_stop="104430" i_length="195"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="104431" e_stop="104437" e_length="7"/>
          </exon>
          <intron i_serial="7" don_prob="0.926" acc_prob="1.000">
            <gDNA_intron_boundary i_start="104438" i_stop="104541" i_length="104"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="104542" e_stop="104603" e_length="62"/>
          </exon>
          <intron i_serial="8" don_prob="0.866" acc_prob="0.855">
            <gDNA_intron_boundary i_start="104604" i_stop="104705" i_length="102"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="104706" e_stop="104805" e_length="100"/>
          </exon>
          <intron i_serial="9" don_prob="0.979" acc_prob="0.972">
            <gDNA_intron_boundary i_start="104806" i_stop="104886" i_length="81"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="104887" e_stop="104937" e_length="51"/>
          </exon>
          <intron i_serial="10" don_prob="0.894" acc_prob="1.000">
            <gDNA_intron_boundary i_start="104938" i_stop="105016" i_length="79"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="105017" e_stop="105053" e_length="37"/>
          </exon>
          <intron i_serial="11" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="105054" i_stop="105313" i_length="260"/>
          </intron>
          <exon e_serial="12" e_score="0.992">
            <gDNA_exon_boundary e_start="105314" e_stop="105572" e_length="259"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92475" stop="92608"/>
              <exon start="92700" stop="92846"/>
              <exon start="103668" stop="103837"/>
              <exon start="103922" stop="103975"/>
              <exon start="104073" stop="104097"/>
              <exon start="104174" stop="104226"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375059" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92475" stop="92608"/>
              <exon start="92700" stop="92846"/>
              <exon start="103668" stop="103837"/>
              <exon start="103922" stop="103975"/>
              <exon start="104073" stop="104097"/>
              <exon start="104174" stop="104198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228191" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104196" stop="104235"/>
              <exon start="104431" stop="104437"/>
              <exon start="104542" stop="104603"/>
              <exon start="104706" stop="104805"/>
              <exon start="104887" stop="104937"/>
              <exon start="105017" stop="105053"/>
              <exon start="105314" stop="105572"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375058" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGCGAGTGTCCAAGTCCACAATATGTAGAGTGTCCTCTTCCTTTTATGGAGTTATGGTCTAATAGCCAAAGAGGAAAAAGAACATCAAGAAGGAAAAGCTCTATGTGGTATTGAGGATTCTCATCAAATTAAAA : TGGATACTCTCTCCTAATAGAAAAGTTAACGAACAATTAATCATGAGGGAACTTCATGGCATTTGTAGCCTAACTTGAATAAGTTTCTTGGATTGGCTTGACCTAAATAGAAGGAAGCTCGAGCTACATTGCAAAAGCTTTTATCAG : CTTGTGATGAAGAAAATTGAGGATCCAACATCCCGTCAACAGTTCTATTCAAAGCGCAAGGATACCATCCTTAAGAAGTCCAATGAGTTGGCTGTTTTATGTGATGTGGATGTTGGTCTTCTAATGTTTTCTCCAGCCGGCGAAGTGACTAGCTATTCTAGCAAAGAACG : TCTTGAGGATGTCATGCTCCTTGCTATGAACAAGGCTGGTGAACTGAACAAGCT : ATCTCCTGAAAATCCAAATGAACAG : GCTTTGATGGACTCTCTCACACAATCAAAACATGAAGCCGAAATGGTGGAGAAGATAGCGAT : TGTTGAG : GCTCATGAGGAGAAGCTTAATGGGGTCAAAGAAAGACTAAGTGAAGCACAACAGAAAATAAG : GTATTACGAACCACAAGTGGAGAGTATCAACTCTGTCCAAGAAGCTGATGCATATGAGAAGTTCATTTTGAGTGCTCTGGAACTGATTCAACTATCAAAG : GCAAAACTCTTGGGTGACCAGGAATTTCTCCAGAGAAATGAAAATGTTGCG : GTGTCTTCTGTCAACGCAGAGGCTATGGCTGCTGAAG : GAACCAGTGGGGGATGGATGTATTGAGGAAACAGGCCGGATCACGGCGGGGAAGTAGCTGAGGATGTCCAACAGCTATAGCAGGAATAATAGTTATACTAGTTTATAGGTTAAGAACTTAGTAGAATAAATAACTTGCCCCTATCAGGCAAGCAAAAGTATGAATAATGTTGCATTTGTCTATTGTGAATGCAACTATTTGAATATGGCATCTGAATATGGCATCAAAACATAGCTATTGTGTTTTGAAATAGAAAACA</gDNA_template>
            <first_frame> C  E  C  P  S  P  Q  Y  V  E  C  P  L  P  F  M  E  L  W  S  N  S  Q  R  G  K  R  T  S  R  R  K  S  S  M  W  Y  *  G  F  S  S  N  *  N :   G  Y  S  L  L  I  E  K  L  T  N  N  *  S  *  G  N  F  M  A  F  V  A  *  L  E  *  V  S  W  I  G  L  T  *  I  E  G  S  S  S  Y  I  A  K  A  F  I  S :   L  *  *  R  K  L  R  I  Q  H  P  V  N  S  S  I  Q  S  A  R  I  P  S  L  R  S  P  M  S  W  L  F  Y  V  M  W  M  L  V  F  *  C  F  L  Q  P  A  K  *  L  A  I  L  A  K  N   : V  L  R  M  S  C  S  L  L  *  T  R  L  V  N  *  T  S   : Y  L  L  K  I  Q  M  N  R :   L  *  W  T  L  S  H  N  Q  N  M  K  P  K  W  W  R  R  *  R   : L  L  R :   L  M  R  R  S  L  M  G  S  K  K  D  *  V  K  H  N  R  K  *   : G  I  T  N  H  K  W  R  V  S  T  L  S  K  K  L  M  H  M  R  S  S  F  *  V  L  W  N  *  F  N  Y  Q  R :   Q  N  S  W  V  T  R  N  F  S  R  E  M  K  M  L  R :   C  L  L  S  T  Q  R  L  W  L  L  K  :  E  P  V  G  D  G  C  I  E  E  T  G  R  I  T  A  G  K  *  L  R  M  S  N  S  Y  S  R  N  N  S  Y  T  S  L  *  V  K  N  L  V  E  *  I  T  C  P  Y  Q  A  S  K  S  M  N  N  V  A  F  V  Y  C  E  C  N  Y  L  N  M  A  S  E  Y  G  I  K  T  *  L  L  C  F  E  I  E  N  </first_frame>
            <second_frame>  A  S  V  Q  V  H  N  M  *  S  V  L  F  L  L  W  S  Y  G  L  I  A  K  E  E  K  E  H  Q  E  G  K  A  L  C  G  I  E  D  S  H  Q  I  K   : M  D  T  L  S  *  *  K  S  *  R  T  I  N  H  E  G  T  S  W  H  L  *  P  N  L  N  K  F  L  G  L  A  *  P  K  *  K  E  A  R  A  T  L  Q  K  L  L  S   : A  C  D  E  E  N  *  G  S  N  I  P  S  T  V  L  F  K  A  Q  G  Y  H  P  *  E  V  Q  *  V  G  C  F  M  *  C  G  C  W  S  S  N  V  F  S  S  R  R  S  D  *  L  F  *  Q  R  T  :  S  *  G  C  H  A  P  C  Y  E  Q  G  W  *  T  E  Q  A  :  I  S  *  K  S  K  *  T   : G  F  D  G  L  S  H  T  I  K  T  *  S  R  N  G  G  E  D  S  D  :  C  *   : G  S  *  G  E  A  *  W  G  Q  R  K  T  K  *  S  T  T  E  N  K  :  V  L  R  T  T  S  G  E  Y  Q  L  C  P  R  S  *  C  I  *  E  V  H  F  E  C  S  G  T  D  S  T  I  K   : G  K  T  L  G  *  P  G  I  S  P  E  K  *  K  C  C   : G  V  F  C  Q  R  R  G  Y  G  C  *  R :   N  Q  W  G  M  D  V  L  R  K  Q  A  G  S  R  R  G  S  S  *  G  C  P  T  A  I  A  G  I  I  V  I  L  V  Y  R  L  R  T  *  *  N  K  *  L  A  P  I  R  Q  A  K  V  *  I  M  L  H  L  S  I  V  N  A  T  I  *  I  W  H  L  N  M  A  S  K  H  S  Y  C  V  L  K  *  K  T </second_frame>
            <third_frame>   R  V  S  K  S  T  I  C  R  V  S  S  S  F  Y  G  V  M  V  *  *  P  K  R  K  K  N  I  K  K  E  K  L  Y  V  V  L  R  I  L  I  K  L  K  :  W  I  L  S  P  N  R  K  V  N  E  Q  L  I  M  R  E  L  H  G  I  C  S  L  T  *  I  S  F  L  D  W  L  D  L  N  R  R  K  L  E  L  H  C  K  S  F  Y  Q  :  L  V  M  K  K  I  E  D  P  T  S  R  Q  Q  F  Y  S  K  R  K  D  T  I  L  K  K  S  N  E  L  A  V  L  C  D  V  D  V  G  L  L  M  F  S  P  A  G  E  V  T  S  Y  S  S  K  E  R :   L  E  D  V  M  L  L  A  M  N  K  A  G  E  L  N  K  L :   S  P  E  N  P  N  E  Q  :  A  L  M  D  S  L  T  Q  S  K  H  E  A  E  M  V  E  K  I  A  I :   V  E  :  A  H  E  E  K  L  N  G  V  K  E  R  L  S  E  A  Q  Q  K  I  R :   Y  Y  E  P  Q  V  E  S  I  N  S  V  Q  E  A  D  A  Y  E  K  F  I  L  S  A  L  E  L  I  Q  L  S  K  :  A  K  L  L  G  D  Q  E  F  L  Q  R  N  E  N  V  A  :  V  S  S  V  N  A  E  A  M  A  A  E   : G  T  S  G  G  W  M  Y  *  G  N  R  P  D  H  G  G  E  V  A  E  D  V  Q  Q  L  *  Q  E  *  *  L  Y  *  F  I  G  *  E  L  S  R  I  N  N  L  P  L  S  G  K  Q  K  Y  E  *  C  C  I  C  L  L  *  M  Q  L  F  E  Y  G  I  *  I  W  H  Q  N  I  A  I  V  F  *  N  R  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="+"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92778" stop="92846"/>
                    <exon start="103668" stop="103837"/>
                    <exon start="103922" stop="103975"/>
                    <exon start="104073" stop="104097"/>
                    <exon start="104174" stop="104235"/>
                    <exon start="104431" stop="104437"/>
                    <exon start="104542" stop="104603"/>
                    <exon start="104706" stop="104805"/>
                    <exon start="104887" stop="104937"/>
                    <exon start="105017" stop="105053"/>
                    <exon start="105314" stop="105339"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>660</number_coding_nucleotides>
                  <number_encoded_amino_acids>220</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ISFLDWLDLNRRKLELHCKSFYQLVMKKIEDPTSRQQFYSKRKDTILKKSNELAVLCDVDVGLLMFSPAGEVTSYSSKERLEDVMLLAMNKAGELNKLSPENPNEQALMDSLTQSKHEAEMVEKIAIVEAHEEKLNGVKERLSEAQQKIRYYEPQVESINSVQEADAYEKFILSALELIQLSKAKLLGDQEFLQRNENVAVSSVNAEAMAAEGTSGGWMY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="91611" e_stop="91684"/>
            <exon e_start="91786" e_stop="91859"/>
            <exon e_start="91980" e_stop="92013"/>
            <exon e_start="92481" e_stop="92608"/>
            <exon e_start="92700" e_stop="92846"/>
            <exon e_start="103668" e_stop="103837"/>
            <exon e_start="103922" e_stop="103975"/>
            <exon e_start="104073" e_stop="104097"/>
            <exon e_start="104174" e_stop="104235"/>
            <exon e_start="104431" e_stop="104437"/>
            <exon e_start="104542" e_stop="104603"/>
            <exon e_start="104706" e_stop="104805"/>
            <exon e_start="104887" e_stop="104937"/>
            <exon e_start="105017" e_stop="105053"/>
            <exon e_start="105314" e_stop="105572"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.772" acc_prob="0.962" e_score="1.000"/>
          <exon-intron don_prob="0.855" acc_prob="0.299" e_score="1.000"/>
          <exon-intron don_prob="0.962" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.957" acc_prob="0.884" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.553" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.967" acc_prob="0.377" e_score="1.000"/>
          <exon-intron don_prob="0.926" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.866" acc_prob="0.855" e_score="1.000"/>
          <exon-intron don_prob="0.979" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.894" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="91611" e_stop="91684" e_length="74"/>
          </exon>
          <intron i_serial="1" don_prob="0.772" acc_prob="0.962">
            <gDNA_intron_boundary i_start="91685" i_stop="91785" i_length="101"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="91786" e_stop="91859" e_length="74"/>
          </exon>
          <intron i_serial="2" don_prob="0.855" acc_prob="0.299">
            <gDNA_intron_boundary i_start="91860" i_stop="91979" i_length="120"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="91980" e_stop="92013" e_length="34"/>
          </exon>
          <intron i_serial="3" don_prob="0.962" acc_prob="0.000">
            <gDNA_intron_boundary i_start="92014" i_stop="92480" i_length="467"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="92481" e_stop="92608" e_length="128"/>
          </exon>
          <intron i_serial="4" don_prob="0.957" acc_prob="0.884">
            <gDNA_intron_boundary i_start="92609" i_stop="92699" i_length="91"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="92700" e_stop="92846" e_length="147"/>
          </exon>
          <intron i_serial="5" don_prob="0.985" acc_prob="0.000">
            <gDNA_intron_boundary i_start="92847" i_stop="103667" i_length="10821"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="103668" e_stop="103837" e_length="170"/>
          </exon>
          <intron i_serial="6" don_prob="0.994" acc_prob="1.000">
            <gDNA_intron_boundary i_start="103838" i_stop="103921" i_length="84"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="103922" e_stop="103975" e_length="54"/>
          </exon>
          <intron i_serial="7" don_prob="0.997" acc_prob="0.990">
            <gDNA_intron_boundary i_start="103976" i_stop="104072" i_length="97"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="104073" e_stop="104097" e_length="25"/>
          </exon>
          <intron i_serial="8" don_prob="0.553" acc_prob="0.997">
            <gDNA_intron_boundary i_start="104098" i_stop="104173" i_length="76"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="104174" e_stop="104235" e_length="62"/>
          </exon>
          <intron i_serial="9" don_prob="0.967" acc_prob="0.377">
            <gDNA_intron_boundary i_start="104236" i_stop="104430" i_length="195"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="104431" e_stop="104437" e_length="7"/>
          </exon>
          <intron i_serial="10" don_prob="0.926" acc_prob="1.000">
            <gDNA_intron_boundary i_start="104438" i_stop="104541" i_length="104"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="104542" e_stop="104603" e_length="62"/>
          </exon>
          <intron i_serial="11" don_prob="0.866" acc_prob="0.855">
            <gDNA_intron_boundary i_start="104604" i_stop="104705" i_length="102"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="104706" e_stop="104805" e_length="100"/>
          </exon>
          <intron i_serial="12" don_prob="0.979" acc_prob="0.972">
            <gDNA_intron_boundary i_start="104806" i_stop="104886" i_length="81"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="104887" e_stop="104937" e_length="51"/>
          </exon>
          <intron i_serial="13" don_prob="0.894" acc_prob="1.000">
            <gDNA_intron_boundary i_start="104938" i_stop="105016" i_length="79"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="105017" e_stop="105053" e_length="37"/>
          </exon>
          <intron i_serial="14" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="105054" i_stop="105313" i_length="260"/>
          </intron>
          <exon e_serial="15" e_score="0.992">
            <gDNA_exon_boundary e_start="105314" e_stop="105572" e_length="259"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91611" stop="91684"/>
              <exon start="91786" stop="91859"/>
              <exon start="91980" stop="92013"/>
              <exon start="92481" stop="92608"/>
              <exon start="92700" stop="92846"/>
              <exon start="103668" stop="103837"/>
              <exon start="103922" stop="103975"/>
              <exon start="104073" stop="104097"/>
              <exon start="104174" stop="104235"/>
              <exon start="104431" stop="104437"/>
              <exon start="104542" stop="104603"/>
              <exon start="104706" stop="104759"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E702917" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104196" stop="104235"/>
              <exon start="104431" stop="104437"/>
              <exon start="104542" stop="104603"/>
              <exon start="104706" stop="104805"/>
              <exon start="104887" stop="104937"/>
              <exon start="105017" stop="105053"/>
              <exon start="105314" stop="105572"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375058" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCCAGAGGCAAAATTTCATGTGAAACCTAAATATCCATAGCCCTCCGATCTGAAGCCTCTGATATCCTTCCATG : GGTCTAATGTAATCCGAAGGCATAACTCAACTAGTATGTGGATGGACAGTACATTGCCTCCGGTCTATTTGATG : TTATAATTCTCCTACCATTAAGTTCAATTTTAAG : TGTCCAAGTCCACAATATGTAGAGTGTCCTCTTCCTTTTATGGAGTTATGGTCTAATAGCCAAAGAGGAAAAAGAACATCAAGAAGGAAAAGCTCTATGTGGTATTGAGGATTCTCATCAAATTAAAA : TGGATACTCTCTCCTAATAGAAAAGTTAACGAACAATTAATCATGAGGGAACTTCATGGCATTTGTAGCCTAACTTGAATAAGTTTCTTGGATTGGCTTGACCTAAATAGAAGGAAGCTCGAGCTACATTGCAAAAGCTTTTATCAG : CTTGTGATGAAGAAAATTGAGGATCCAACATCCCGTCAACAGTTCTATTCAAAGCGCAAGGATACCATCCTTAAGAAGTCCAATGAGTTGGCTGTTTTATGTGATGTGGATGTTGGTCTTCTAATGTTTTCTCCAGCCGGCGAAGTGACTAGCTATTCTAGCAAAGAACG : TCTTGAGGATGTCATGCTCCTTGCTATGAACAAGGCTGGTGAACTGAACAAGCT : ATCTCCTGAAAATCCAAATGAACAG : GCTTTGATGGACTCTCTCACACAATCAAAACATGAAGCCGAAATGGTGGAGAAGATAGCGAT : TGTTGAG : GCTCATGAGGAGAAGCTTAATGGGGTCAAAGAAAGACTAAGTGAAGCACAACAGAAAATAAG : GTATTACGAACCACAAGTGGAGAGTATCAACTCTGTCCAAGAAGCTGATGCATATGAGAAGTTCATTTTGAGTGCTCTGGAACTGATTCAACTATCAAAG : GCAAAACTCTTGGGTGACCAGGAATTTCTCCAGAGAAATGAAAATGTTGCG : GTGTCTTCTGTCAACGCAGAGGCTATGGCTGCTGAAG : GAACCAGTGGGGGATGGATGTATTGAGGAAACAGGCCGGATCACGGCGGGGAAGTAGCTGAGGATGTCCAACAGCTATAGCAGGAATAATAGTTATACTAGTTTATAGGTTAAGAACTTAGTAGAATAAATAACTTGCCCCTATCAGGCAAGCAAAAGTATGAATAATGTTGCATTTGTCTATTGTGAATGCAACTATTTGAATATGGCATCTGAATATGGCATCAAAACATAGCTATTGTGTTTTGAAATAGAAAACA</gDNA_template>
            <first_frame> A  R  G  K  I  S  C  E  T  *  I  S  I  A  L  R  S  E  A  S  D  I  L  P  W :   V  *  C  N  P  K  A  *  L  N  *  Y  V  D  G  Q  Y  I  A  S  G  L  F  D   : V  I  I  L  L  P  L  S  S  I  L  S :   V  Q  V  H  N  M  *  S  V  L  F  L  L  W  S  Y  G  L  I  A  K  E  E  K  E  H  Q  E  G  K  A  L  C  G  I  E  D  S  H  Q  I  K   : M  D  T  L  S  *  *  K  S  *  R  T  I  N  H  E  G  T  S  W  H  L  *  P  N  L  N  K  F  L  G  L  A  *  P  K  *  K  E  A  R  A  T  L  Q  K  L  L  S   : A  C  D  E  E  N  *  G  S  N  I  P  S  T  V  L  F  K  A  Q  G  Y  H  P  *  E  V  Q  *  V  G  C  F  M  *  C  G  C  W  S  S  N  V  F  S  S  R  R  S  D  *  L  F  *  Q  R  T  :  S  *  G  C  H  A  P  C  Y  E  Q  G  W  *  T  E  Q  A  :  I  S  *  K  S  K  *  T   : G  F  D  G  L  S  H  T  I  K  T  *  S  R  N  G  G  E  D  S  D  :  C  *   : G  S  *  G  E  A  *  W  G  Q  R  K  T  K  *  S  T  T  E  N  K  :  V  L  R  T  T  S  G  E  Y  Q  L  C  P  R  S  *  C  I  *  E  V  H  F  E  C  S  G  T  D  S  T  I  K   : G  K  T  L  G  *  P  G  I  S  P  E  K  *  K  C  C   : G  V  F  C  Q  R  R  G  Y  G  C  *  R :   N  Q  W  G  M  D  V  L  R  K  Q  A  G  S  R  R  G  S  S  *  G  C  P  T  A  I  A  G  I  I  V  I  L  V  Y  R  L  R  T  *  *  N  K  *  L  A  P  I  R  Q  A  K  V  *  I  M  L  H  L  S  I  V  N  A  T  I  *  I  W  H  L  N  M  A  S  K  H  S  Y  C  V  L  K  *  K  T </first_frame>
            <second_frame>  P  E  A  K  F  H  V  K  P  K  Y  P  *  P  S  D  L  K  P  L  I  S  F  H   : G  S  N  V  I  R  R  H  N  S  T  S  M  W  M  D  S  T  L  P  P  V  Y  L  M  :  L  *  F  S  Y  H  *  V  Q  F  *   : V  S  K  S  T  I  C  R  V  S  S  S  F  Y  G  V  M  V  *  *  P  K  R  K  K  N  I  K  K  E  K  L  Y  V  V  L  R  I  L  I  K  L  K  :  W  I  L  S  P  N  R  K  V  N  E  Q  L  I  M  R  E  L  H  G  I  C  S  L  T  *  I  S  F  L  D  W  L  D  L  N  R  R  K  L  E  L  H  C  K  S  F  Y  Q  :  L  V  M  K  K  I  E  D  P  T  S  R  Q  Q  F  Y  S  K  R  K  D  T  I  L  K  K  S  N  E  L  A  V  L  C  D  V  D  V  G  L  L  M  F  S  P  A  G  E  V  T  S  Y  S  S  K  E  R :   L  E  D  V  M  L  L  A  M  N  K  A  G  E  L  N  K  L :   S  P  E  N  P  N  E  Q  :  A  L  M  D  S  L  T  Q  S  K  H  E  A  E  M  V  E  K  I  A  I :   V  E  :  A  H  E  E  K  L  N  G  V  K  E  R  L  S  E  A  Q  Q  K  I  R :   Y  Y  E  P  Q  V  E  S  I  N  S  V  Q  E  A  D  A  Y  E  K  F  I  L  S  A  L  E  L  I  Q  L  S  K  :  A  K  L  L  G  D  Q  E  F  L  Q  R  N  E  N  V  A  :  V  S  S  V  N  A  E  A  M  A  A  E   : G  T  S  G  G  W  M  Y  *  G  N  R  P  D  H  G  G  E  V  A  E  D  V  Q  Q  L  *  Q  E  *  *  L  Y  *  F  I  G  *  E  L  S  R  I  N  N  L  P  L  S  G  K  Q  K  Y  E  *  C  C  I  C  L  L  *  M  Q  L  F  E  Y  G  I  *  I  W  H  Q  N  I  A  I  V  F  *  N  R  K   </second_frame>
            <third_frame>   Q  R  Q  N  F  M  *  N  L  N  I  H  S  P  P  I  *  S  L  *  Y  P  S  M  :  G  L  M  *  S  E  G  I  T  Q  L  V  C  G  W  T  V  H  C  L  R  S  I  *  C :   Y  N  S  P  T  I  K  F  N  F  K  :  C  P  S  P  Q  Y  V  E  C  P  L  P  F  M  E  L  W  S  N  S  Q  R  G  K  R  T  S  R  R  K  S  S  M  W  Y  *  G  F  S  S  N  *  N :   G  Y  S  L  L  I  E  K  L  T  N  N  *  S  *  G  N  F  M  A  F  V  A  *  L  E  *  V  S  W  I  G  L  T  *  I  E  G  S  S  S  Y  I  A  K  A  F  I  S :   L  *  *  R  K  L  R  I  Q  H  P  V  N  S  S  I  Q  S  A  R  I  P  S  L  R  S  P  M  S  W  L  F  Y  V  M  W  M  L  V  F  *  C  F  L  Q  P  A  K  *  L  A  I  L  A  K  N   : V  L  R  M  S  C  S  L  L  *  T  R  L  V  N  *  T  S   : Y  L  L  K  I  Q  M  N  R :   L  *  W  T  L  S  H  N  Q  N  M  K  P  K  W  W  R  R  *  R   : L  L  R :   L  M  R  R  S  L  M  G  S  K  K  D  *  V  K  H  N  R  K  *   : G  I  T  N  H  K  W  R  V  S  T  L  S  K  K  L  M  H  M  R  S  S  F  *  V  L  W  N  *  F  N  Y  Q  R :   Q  N  S  W  V  T  R  N  F  S  R  E  M  K  M  L  R :   C  L  L  S  T  Q  R  L  W  L  L  K  :  E  P  V  G  D  G  C  I  E  E  T  G  R  I  T  A  G  K  *  L  R  M  S  N  S  Y  S  R  N  N  S  Y  T  S  L  *  V  K  N  L  V  E  *  I  T  C  P  Y  Q  A  S  K  S  M  N  N  V  A  F  V  Y  C  E  C  N  Y  L  N  M  A  S  E  Y  G  I  K  T  *  L  L  C  F  E  I  E  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="+"/>
                <serials PGL_serial="11" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92778" stop="92846"/>
                    <exon start="103668" stop="103837"/>
                    <exon start="103922" stop="103975"/>
                    <exon start="104073" stop="104097"/>
                    <exon start="104174" stop="104235"/>
                    <exon start="104431" stop="104437"/>
                    <exon start="104542" stop="104603"/>
                    <exon start="104706" stop="104805"/>
                    <exon start="104887" stop="104937"/>
                    <exon start="105017" stop="105053"/>
                    <exon start="105314" stop="105339"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>660</number_coding_nucleotides>
                  <number_encoded_amino_acids>220</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ISFLDWLDLNRRKLELHCKSFYQLVMKKIEDPTSRQQFYSKRKDTILKKSNELAVLCDVDVGLLMFSPAGEVTSYSSKERLEDVMLLAMNKAGELNKLSPENPNEQALMDSLTQSKHEAEMVEKIAIVEAHEEKLNGVKERLSEAQQKIRYYEPQVESINSVQEADAYEKFILSALELIQLSKAKLLGDQEFLQRNENVAVSSVNAEAMAAEGTSGGWMY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="91620" e_stop="91684"/>
            <exon e_start="91786" e_stop="92275"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.772" acc_prob="0.962" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="91620" e_stop="91684" e_length="65"/>
          </exon>
          <intron i_serial="1" don_prob="0.772" acc_prob="0.962">
            <gDNA_intron_boundary i_start="91685" i_stop="91785" i_length="101"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="91786" e_stop="92275" e_length="490"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91620" stop="91684"/>
              <exon start="91786" stop="92275"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E320913" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAATTTCATGTGAAACCTAAATATCCATAGCCCTCCGATCTGAAGCCTCTGATATCCTTCCATG : GGTCTAATGTAATCCGAAGGCATAACTCAACTAGTATGTGGATGGACAGTACATTGCCTCCGGTCTATTTGATGGTCCGTTACTCAAACACTCCGATTGTTTCAATCGGGTTGATTTGATTATCATTTTCATTCAGTTTTTGAAGTTTTTATCAAATGTGACATTGAGTTCTGCTTGGTTGAACGTTTTGGCAGTTATAATTCTCCTACCATTAAGTTCAATTTTAAGGTAATCTTCATTGATTTTTATGCTCTGTTTTGTCCCATTGTTTAGATGGAATTTATAATTCTCCCACTGTTAAGTTCACTTCTAGCTAATTTTTGTTGATTTATGGGAAAAAAGCTCAGGTGTCATGTACTCTTAGCTTTGTAAAAAGTGATATTGTATTTTGAGAGTGTCGGGTTCGTTCGGTTTTCATTTGATTCAGTTCTGAAGATTTAAGTGTTCTGTTATGCTCGGTTTGGTTGTAGTTTTAGCAATTTCACTACTA</gDNA_template>
            <first_frame> K  I  S  C  E  T  *  I  S  I  A  L  R  S  E  A  S  D  I  L  P  W :   V  *  C  N  P  K  A  *  L  N  *  Y  V  D  G  Q  Y  I  A  S  G  L  F  D  G  P  L  L  K  H  S  D  C  F  N  R  V  D  L  I  I  I  F  I  Q  F  L  K  F  L  S  N  V  T  L  S  S  A  W  L  N  V  L  A  V  I  I  L  L  P  L  S  S  I  L  R  *  S  S  L  I  F  M  L  C  F  V  P  L  F  R  W  N  L  *  F  S  H  C  *  V  H  F  *  L  I  F  V  D  L  W  E  K  S  S  G  V  M  Y  S  *  L  C  K  K  *  Y  C  I  L  R  V  S  G  S  F  G  F  H  L  I  Q  F  *  R  F  K  C  S  V  M  L  G  L  V  V  V  L  A  I  S  L  L </first_frame>
            <second_frame>  K  F  H  V  K  P  K  Y  P  *  P  S  D  L  K  P  L  I  S  F  H   : G  S  N  V  I  R  R  H  N  S  T  S  M  W  M  D  S  T  L  P  P  V  Y  L  M  V  R  Y  S  N  T  P  I  V  S  I  G  L  I  *  L  S  F  S  F  S  F  *  S  F  Y  Q  M  *  H  *  V  L  L  G  *  T  F  W  Q  L  *  F  S  Y  H  *  V  Q  F  *  G  N  L  H  *  F  L  C  S  V  L  S  H  C  L  D  G  I  Y  N  S  P  T  V  K  F  T  S  S  *  F  L  L  I  Y  G  K  K  A  Q  V  S  C  T  L  S  F  V  K  S  D  I  V  F  *  E  C  R  V  R  S  V  F  I  *  F  S  S  E  D  L  S  V  L  L  C  S  V  W  L  *  F  *  Q  F  H  Y   </second_frame>
            <third_frame>   N  F  M  *  N  L  N  I  H  S  P  P  I  *  S  L  *  Y  P  S  M  :  G  L  M  *  S  E  G  I  T  Q  L  V  C  G  W  T  V  H  C  L  R  S  I  *  W  S  V  T  Q  T  L  R  L  F  Q  S  G  *  F  D  Y  H  F  H  S  V  F  E  V  F  I  K  C  D  I  E  F  C  L  V  E  R  F  G  S  Y  N  S  P  T  I  K  F  N  F  K  V  I  F  I  D  F  Y  A  L  F  C  P  I  V  *  M  E  F  I  I  L  P  L  L  S  S  L  L  A  N  F  C  *  F  M  G  K  K  L  R  C  H  V  L  L  A  L  *  K  V  I  L  Y  F  E  S  V  G  F  V  R  F  S  F  D  S  V  L  K  I  *  V  F  C  Y  A  R  F  G  C  S  F  S  N  F  T  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="+"/>
                <serials PGL_serial="11" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="91820" stop="92017"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YVDGQYIASGLFDGPLLKHSDCFNRVDLIIIFIQFLKFLSNVTLSSAWLNVLAVIILLPLSSILR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="114698" PGL_stop="115849"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="114698" e_stop="115356"/>
            <exon e_start="115441" e_stop="115849"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.989" acc_prob="0.993" e_score="0.994"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="114698" e_stop="115356" e_length="659"/>
          </exon>
          <intron i_serial="1" don_prob="0.989" acc_prob="0.993">
            <gDNA_intron_boundary i_start="115357" i_stop="115440" i_length="84"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="115441" e_stop="115849" e_length="409"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="114698" stop="115356"/>
              <exon start="115441" stop="115849"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746741" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAAGAGCAGCACGTAAATTAAGAGAGAACCAAAGCACTACCAGTGTACAGACAGAAGATCTTGTAGAAGATCCTGCTCAGGAGTCGGCAGATTATCATCGTAACCTTGGTCTTCAGATGGTTTCTGGTTTAAGCAACGAGCTTGAGAATGTAAGAAAAGCTTCACTTATTGACGGCGAGAACTTAAGTGCAGCTGTCATGAAGCTTAATCACTCACTCATGAAAACTAAAGAGTTTCTGGACACTGATATGAGAAGTTTGGAGGATGAAAGTAAGTTCCGTGATACACTCACAAATTTTATCCAACATGCGGAACAGGACATTACTTGCATACTAGAAGAAGAGAAAAAGATAATGTCTTTGGTTAAGAGCACAGGAGATTACTTCCATGGAAATTCAGGGAAGGATGAAGGCTTGCGTCTCTTTTCAGTCGTTAGTGATTTCTTGATTATGTTGGACAAGGCATGTACAGTGGTGAGAAACTCAACGAAGTTACCAGTTAAGATTCCTAAAAAAGGGACATTAACATCTCCTTCCCAAGAATCCTGTCCTGAGTCTTTGCAAGACATACGTAAACAACTATTTCCTGCAATCCAGGAGCGACAGATGCACTATTCTAGTTCAGACGACGAGAGCTCAAGCCCGTAGCTGTCTATTTAG : GTGTCAGAGTACTTTGGAGCTAATATGGCTTGGATAATAGTCCACAGAAGTATGTATTTAACGACTATATGAGGCCTAAGGTGTGCCTCCTACACCCAGTTAGCAAACACATGCTCTACGAGATAGAGTGAATAGACATTTTGCTTCAATGATCTCTTCGAGTCCTAGCACTAGCGGTAGGAAGAATGGCTATAGTATAGATGCCATAGTAGTTATTGCATGGTCTACTACAACGATCCACAGAGTTAAACCACAGCCTCTCACTGTCTGTAGTCACCTTTATCTATAACAATCCAAATATCGAGATGGTAATGGTACTGAAATCTCCTAAATATTTGTTAAATTATATTTAGTATGTATTGGAAGTTAGACCAGATTCGTATAGTTTCAGCTTCTTTTTCTCGTCAAG</gDNA_template>
            <first_frame> *  E  Q  H  V  N  *  E  R  T  K  A  L  P  V  Y  R  Q  K  I  L  *  K  I  L  L  R  S  R  Q  I  I  I  V  T  L  V  F  R  W  F  L  V  *  A  T  S  L  R  M  *  E  K  L  H  L  L  T  A  R  T  *  V  Q  L  S  *  S  L  I  T  H  S  *  K  L  K  S  F  W  T  L  I  *  E  V  W  R  M  K  V  S  S  V  I  H  S  Q  I  L  S  N  M  R  N  R  T  L  L  A  Y  *  K  K  R  K  R  *  C  L  W  L  R  A  Q  E  I  T  S  M  E  I  Q  G  R  M  K  A  C  V  S  F  Q  S  L  V  I  S  *  L  C  W  T  R  H  V  Q  W  *  E  T  Q  R  S  Y  Q  L  R  F  L  K  K  G  H  *  H  L  L  P  K  N  P  V  L  S  L  C  K  T  Y  V  N  N  Y  F  L  Q  S  R  S  D  R  C  T  I  L  V  Q  T  T  R  A  Q  A  R  S  C  L  F  R :   C  Q  S  T  L  E  L  I  W  L  G  *  *  S  T  E  V  C  I  *  R  L  Y  E  A  *  G  V  P  P  T  P  S  *  Q  T  H  A  L  R  D  R  V  N  R  H  F  A  S  M  I  S  S  S  P  S  T  S  G  R  K  N  G  Y  S  I  D  A  I  V  V  I  A  W  S  T  T  T  I  H  R  V  K  P  Q  P  L  T  V  C  S  H  L  Y  L  *  Q  S  K  Y  R  D  G  N  G  T  E  I  S  *  I  F  V  K  L  Y  L  V  C  I  G  S  *  T  R  F  V  *  F  Q  L  L  F  L  V  K </first_frame>
            <second_frame>  K  S  S  T  *  I  K  R  E  P  K  H  Y  Q  C  T  D  R  R  S  C  R  R  S  C  S  G  V  G  R  L  S  S  *  P  W  S  S  D  G  F  W  F  K  Q  R  A  *  E  C  K  K  S  F  T  Y  *  R  R  E  L  K  C  S  C  H  E  A  *  S  L  T  H  E  N  *  R  V  S  G  H  *  Y  E  K  F  G  G  *  K  *  V  P  *  Y  T  H  K  F  Y  P  T  C  G  T  G  H  Y  L  H  T  R  R  R  E  K  D  N  V  F  G  *  E  H  R  R  L  L  P  W  K  F  R  E  G  *  R  L  A  S  L  F  S  R  *  *  F  L  D  Y  V  G  Q  G  M  Y  S  G  E  K  L  N  E  V  T  S  *  D  S  *  K  R  D  I  N  I  S  F  P  R  I  L  S  *  V  F  A  R  H  T  *  T  T  I  S  C  N  P  G  A  T  D  A  L  F  *  F  R  R  R  E  L  K  P  V  A  V  Y  L   : G  V  R  V  L  W  S  *  Y  G  L  D  N  S  P  Q  K  Y  V  F  N  D  Y  M  R  P  K  V  C  L  L  H  P  V  S  K  H  M  L  Y  E  I  E  *  I  D  I  L  L  Q  *  S  L  R  V  L  A  L  A  V  G  R  M  A  I  V  *  M  P  *  *  L  L  H  G  L  L  Q  R  S  T  E  L  N  H  S  L  S  L  S  V  V  T  F  I  Y  N  N  P  N  I  E  M  V  M  V  L  K  S  P  K  Y  L  L  N  Y  I  *  Y  V  L  E  V  R  P  D  S  Y  S  F  S  F  F  F  S  S   </second_frame>
            <third_frame>   R  A  A  R  K  L  R  E  N  Q  S  T  T  S  V  Q  T  E  D  L  V  E  D  P  A  Q  E  S  A  D  Y  H  R  N  L  G  L  Q  M  V  S  G  L  S  N  E  L  E  N  V  R  K  A  S  L  I  D  G  E  N  L  S  A  A  V  M  K  L  N  H  S  L  M  K  T  K  E  F  L  D  T  D  M  R  S  L  E  D  E  S  K  F  R  D  T  L  T  N  F  I  Q  H  A  E  Q  D  I  T  C  I  L  E  E  E  K  K  I  M  S  L  V  K  S  T  G  D  Y  F  H  G  N  S  G  K  D  E  G  L  R  L  F  S  V  V  S  D  F  L  I  M  L  D  K  A  C  T  V  V  R  N  S  T  K  L  P  V  K  I  P  K  K  G  T  L  T  S  P  S  Q  E  S  C  P  E  S  L  Q  D  I  R  K  Q  L  F  P  A  I  Q  E  R  Q  M  H  Y  S  S  S  D  D  E  S  S  S  P  *  L  S  I  *  :  V  S  E  Y  F  G  A  N  M  A  W  I  I  V  H  R  S  M  Y  L  T  T  I  *  G  L  R  C  A  S  Y  T  Q  L  A  N  T  C  S  T  R  *  S  E  *  T  F  C  F  N  D  L  F  E  S  *  H  *  R  *  E  E  W  L  *  Y  R  C  H  S  S  Y  C  M  V  Y  Y  N  D  P  Q  S  *  T  T  A  S  H  C  L  *  S  P  L  S  I  T  I  Q  I  S  R  W  *  W  Y  *  N  L  L  N  I  C  *  I  I  F  S  M  Y  W  K  L  D  Q  I  R  I  V  S  A  S  F  S  R  Q  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="114700" stop="115344"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>642</number_coding_nucleotides>
                  <number_encoded_amino_acids>214</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RAARKLRENQSTTSVQTEDLVEDPAQESADYHRNLGLQMVSGLSNELENVRKASLIDGENLSAAVMKLNHSLMKTKEFLDTDMRSLEDESKFRDTLTNFIQHAEQDITCILEEEKKIMSLVKSTGDYFHGNSGKDEGLRLFSVVSDFLIMLDKACTVVRNSTKLPVKIPKKGTLTSPSQESCPESLQDIRKQLFPAIQERQMHYSSSDDESSSP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="125006" PGL_stop="126475"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="125006" e_stop="126475"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="125006" e_stop="126475" e_length="1470"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125006" stop="125625"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313426" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125307" stop="125621"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E305391" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125455" stop="126330"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703771" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126089" stop="126475"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274041" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAACACTCGAATCGACTGCGAAGTCTAATGCAAAAGGCGAAGACAAGGAATAACGCGATTCCACTTCAAATTCGGATGCTGACCCATCTTCACTTTCAGTATCAGAAGAAGATTAGGGTATGTGTAGAGTTATTAACTGATTTTTGAGTGATAAATCTCTTTTTGACCGAATGATTAATTTTGAATCCTTCACCATTTTTTTCCAAATTCACATCTAATTAAGAACGAGAAATCACACGAAAAAAAGAATTTCCAATTAAAATAACTAATAAGATGTGATTGTTCCGTCCTTCGACCAGTAGTGACTCATAAATTTCACTCGGAATACATGTCTAAATGGGGAAAGTGATTATCCAACTGTAGAAGGGCGCGGCAATCGATTAATACATTCGCTTTTTGTATAAATTGAGAAAAACCCTACACAAAGCTTTCATCTTTTTGTCTCTGCTTCAGCACTCACCATAGACATAGCTGTTGGCCGAATAGCTCTCTTTTCTTGCTTTCAGAAACAATGGCCCCCAAAACCAAATCCCGCTTAGTAGACCAGCCTCCTTCTGCATCGTCCTCTGAAGAACAAGAATTGGTGGAGGAATCCCAGGAAGAAGAAGAAGAACAATCGAGGGAGGAAGAAGGAGAAGAAGAATCAGGGGAAGAAACTGAAGAACCCAAGACAGCACATCCTGTTGTAAAGAGATCCAGCACTCAGAAACTCCAATTTTCTTCTGATTCCGGCAGCGAGAGTGGGTCAGGATCCGAATCCGGACATTCCCTGCCTTCCCCTTCTGCATTGGACTTCACCATCAAGCCCAGTGTTCCTGCTAAAGCTGCCACCCCATCGAAGCCAGCAGCAAAGAGGCCGCAAGATACCCAGACAGAGAAAGGGAGGAAGAAGCCCAAGATTGCAGAAGAAGAGGAGAAAAAATCAGCTGCTACTCCTCGCAATCTATGGAGCGATGACGACCAGCTTGCTCTACTCAAAGGTATTGCTGAATACAAGGCGGTAAAAGGTGTGGAACCTATTGCCGATATGTCTGCTTTTCATGAATTCATCAGGGGGAAGTTGCAGGTTGAAGCTTCAAATAAGAGACTCCGAGACAAGGTAAGGAGGTTAAAGACGAAATATTTGACTAATGTGAAAGATAGTGAGGAGCCAGTTTTCATGAAGGGTCAGGATTATCTAGTTTTTGAGCATTCAAAGAGGATTTGGGGTGCCCCTGGAACTAGTAATGGAGTTAGCACTAATGGCACAGCTAAAATTACTGTTGAGGTTAACAAGAGCTCTGAACCTAAGAGAAGTGCTAAAGTCAGCAAACCCAAGGATGATGAGAAACATAAGGAAGAAGAGAAACAGGTTGCTGTAAAAGAGGTGGTTAAGGAGGATATAGTTAAGGGTGATCAACAGGATTTCCAGTCTGAATTTCCACATTTGACTGCTTCATTTGAAAGTATGGCTGGCATGTCGACAATGTA</gDNA_template>
            <first_frame> E  H  S  N  R  L  R  S  L  M  Q  K  A  K  T  R  N  N  A  I  P  L  Q  I  R  M  L  T  H  L  H  F  Q  Y  Q  K  K  I  R  V  C  V  E  L  L  T  D  F  *  V  I  N  L  F  L  T  E  *  L  I  L  N  P  S  P  F  F  S  K  F  T  S  N  *  E  R  E  I  T  R  K  K  E  F  P  I  K  I  T  N  K  M  *  L  F  R  P  S  T  S  S  D  S  *  I  S  L  G  I  H  V  *  M  G  K  V  I  I  Q  L  *  K  G  A  A  I  D  *  Y  I  R  F  L  Y  K  L  R  K  T  L  H  K  A  F  I  F  L  S  L  L  Q  H  S  P  *  T  *  L  L  A  E  *  L  S  F  L  A  F  R  N  N  G  P  Q  N  Q  I  P  L  S  R  P  A  S  F  C  I  V  L  *  R  T  R  I  G  G  G  I  P  G  R  R  R  R  T  I  E  G  G  R  R  R  R  R  I  R  G  R  N  *  R  T  Q  D  S  T  S  C  C  K  E  I  Q  H  S  E  T  P  I  F  F  *  F  R  Q  R  E  W  V  R  I  R  I  R  T  F  P  A  F  P  F  C  I  G  L  H  H  Q  A  Q  C  S  C  *  S  C  H  P  I  E  A  S  S  K  E  A  A  R  Y  P  D  R  E  R  E  E  E  A  Q  D  C  R  R  R  G  E  K  I  S  C  Y  S  S  Q  S  M  E  R  *  R  P  A  C  S  T  Q  R  Y  C  *  I  Q  G  G  K  R  C  G  T  Y  C  R  Y  V  C  F  S  *  I  H  Q  G  E  V  A  G  *  S  F  K  *  E  T  P  R  Q  G  K  E  V  K  D  E  I  F  D  *  C  E  R  *  *  G  A  S  F  H  E  G  S  G  L  S  S  F  *  A  F  K  E  D  L  G  C  P  W  N  *  *  W  S  *  H  *  W  H  S  *  N  Y  C  *  G  *  Q  E  L  *  T  *  E  K  C  *  S  Q  Q  T  Q  G  *  *  E  T  *  G  R  R  E  T  G  C  C  K  R  G  G  *  G  G  Y  S  *  G  *  S  T  G  F  P  V  *  I  S  T  F  D  C  F  I  *  K  Y  G  W  H  V  D  N  V </first_frame>
            <second_frame>  N  T  R  I  D  C  E  V  *  C  K  R  R  R  Q  G  I  T  R  F  H  F  K  F  G  C  *  P  I  F  T  F  S  I  R  R  R  L  G  Y  V  *  S  Y  *  L  I  F  E  *  *  I  S  F  *  P  N  D  *  F  *  I  L  H  H  F  F  P  N  S  H  L  I  K  N  E  K  S  H  E  K  K  N  F  Q  L  K  *  L  I  R  C  D  C  S  V  L  R  P  V  V  T  H  K  F  H  S  E  Y  M  S  K  W  G  K  *  L  S  N  C  R  R  A  R  Q  S  I  N  T  F  A  F  C  I  N  *  E  K  P  Y  T  K  L  S  S  F  C  L  C  F  S  T  H  H  R  H  S  C  W  P  N  S  S  L  F  L  L  S  E  T  M  A  P  K  T  K  S  R  L  V  D  Q  P  P  S  A  S  S  S  E  E  Q  E  L  V  E  E  S  Q  E  E  E  E  E  Q  S  R  E  E  E  G  E  E  E  S  G  E  E  T  E  E  P  K  T  A  H  P  V  V  K  R  S  S  T  Q  K  L  Q  F  S  S  D  S  G  S  E  S  G  S  G  S  E  S  G  H  S  L  P  S  P  S  A  L  D  F  T  I  K  P  S  V  P  A  K  A  A  T  P  S  K  P  A  A  K  R  P  Q  D  T  Q  T  E  K  G  R  K  K  P  K  I  A  E  E  E  E  K  K  S  A  A  T  P  R  N  L  W  S  D  D  D  Q  L  A  L  L  K  G  I  A  E  Y  K  A  V  K  G  V  E  P  I  A  D  M  S  A  F  H  E  F  I  R  G  K  L  Q  V  E  A  S  N  K  R  L  R  D  K  V  R  R  L  K  T  K  Y  L  T  N  V  K  D  S  E  E  P  V  F  M  K  G  Q  D  Y  L  V  F  E  H  S  K  R  I  W  G  A  P  G  T  S  N  G  V  S  T  N  G  T  A  K  I  T  V  E  V  N  K  S  S  E  P  K  R  S  A  K  V  S  K  P  K  D  D  E  K  H  K  E  E  E  K  Q  V  A  V  K  E  V  V  K  E  D  I  V  K  G  D  Q  Q  D  F  Q  S  E  F  P  H  L  T  A  S  F  E  S  M  A  G  M  S  T  M   </second_frame>
            <third_frame>   T  L  E  S  T  A  K  S  N  A  K  G  E  D  K  E  *  R  D  S  T  S  N  S  D  A  D  P  S  S  L  S  V  S  E  E  D  *  G  M  C  R  V  I  N  *  F  L  S  D  K  S  L  F  D  R  M  I  N  F  E  S  F  T  I  F  F  Q  I  H  I  *  L  R  T  R  N  H  T  K  K  R  I  S  N  *  N  N  *  *  D  V  I  V  P  S  F  D  Q  *  *  L  I  N  F  T  R  N  T  C  L  N  G  E  S  D  Y  P  T  V  E  G  R  G  N  R  L  I  H  S  L  F  V  *  I  E  K  N  P  T  Q  S  F  H  L  F  V  S  A  S  A  L  T  I  D  I  A  V  G  R  I  A  L  F  S  C  F  Q  K  Q  W  P  P  K  P  N  P  A  *  *  T  S  L  L  L  H  R  P  L  K  N  K  N  W  W  R  N  P  R  K  K  K  K  N  N  R  G  R  K  K  E  K  K  N  Q  G  K  K  L  K  N  P  R  Q  H  I  L  L  *  R  D  P  A  L  R  N  S  N  F  L  L  I  P  A  A  R  V  G  Q  D  P  N  P  D  I  P  C  L  P  L  L  H  W  T  S  P  S  S  P  V  F  L  L  K  L  P  P  H  R  S  Q  Q  Q  R  G  R  K  I  P  R  Q  R  K  G  G  R  S  P  R  L  Q  K  K  R  R  K  N  Q  L  L  L  L  A  I  Y  G  A  M  T  T  S  L  L  Y  S  K  V  L  L  N  T  R  R  *  K  V  W  N  L  L  P  I  C  L  L  F  M  N  S  S  G  G  S  C  R  L  K  L  Q  I  R  D  S  E  T  R  *  G  G  *  R  R  N  I  *  L  M  *  K  I  V  R  S  Q  F  S  *  R  V  R  I  I  *  F  L  S  I  Q  R  G  F  G  V  P  L  E  L  V  M  E  L  A  L  M  A  Q  L  K  L  L  L  R  L  T  R  A  L  N  L  R  E  V  L  K  S  A  N  P  R  M  M  R  N  I  R  K  K  R  N  R  L  L  *  K  R  W  L  R  R  I  *  L  R  V  I  N  R  I  S  S  L  N  F  H  I  *  L  L  H  L  K  V  W  L  A  C  R  Q  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125415" stop="126473"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1059</number_coding_nucleotides>
                  <number_encoded_amino_acids>353</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EKPYTKLSSFCLCFSTHHRHSCWPNSSLFLLSETMAPKTKSRLVDQPPSASSSEEQELVEESQEEEEEQSREEEGEEESGEETEEPKTAHPVVKRSSTQKLQFSSDSGSESGSGSESGHSLPSPSALDFTIKPSVPAKAATPSKPAAKRPQDTQTEKGRKKPKIAEEEEKKSAATPRNLWSDDDQLALLKGIAEYKAVKGVEPIADMSAFHEFIRGKLQVEASNKRLRDKVRRLKTKYLTNVKDSEEPVFMKGQDYLVFEHSKRIWGAPGTSNGVSTNGTAKITVEVNKSSEPKRSAKVSKPKDDEKHKEEEKQVAVKEVVKEDIVKGDQQDFQSEFPHLTASFESMAGMSTM</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="136709" PGL_stop="125461"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="136709" e_stop="136606"/>
            <exon e_start="129680" e_stop="129663"/>
            <exon e_start="126642" e_stop="126638"/>
            <exon e_start="125669" e_stop="125461"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.983" acc_prob="0.998" e_score="0.798"/>
          <exon-intron don_prob="0.986" acc_prob="0.000" e_score="0.444"/>
          <exon-intron don_prob="0.538" acc_prob="0.000" e_score="0.800"/>
          <exon-only e_score="0.962"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.798">
            <gDNA_exon_boundary e_start="136709" e_stop="136606" e_length="104"/>
          </exon>
          <intron i_serial="1" don_prob="0.983" acc_prob="0.998">
            <gDNA_intron_boundary i_start="136605" i_stop="129681" i_length="6925"/>
          </intron>
          <exon e_serial="2" e_score="0.444">
            <gDNA_exon_boundary e_start="129680" e_stop="129663" e_length="18"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.000">
            <gDNA_intron_boundary i_start="129662" i_stop="126643" i_length="3020"/>
          </intron>
          <exon e_serial="3" e_score="0.800">
            <gDNA_exon_boundary e_start="126642" e_stop="126638" e_length="5"/>
          </exon>
          <intron i_serial="3" don_prob="0.538" acc_prob="0.000">
            <gDNA_intron_boundary i_start="126637" i_stop="125670" i_length="968"/>
          </intron>
          <exon e_serial="4" e_score="0.962">
            <gDNA_exon_boundary e_start="125669" e_stop="125461" e_length="209"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="136709" stop="136606"/>
              <exon start="129680" stop="129663"/>
              <exon start="126642" stop="126638"/>
              <exon start="125669" stop="125461"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E445419" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGATTCGGAACCTGACCCATTCTCGCTGTCGGACTCAGAAGAAAATTGGAGCTTCTGAGCGGTTTTGACTGGTTTCTGAGTGATGGATCTCTTCACAACTGGAG : GATCAGAGCATGGGACAG : TCATT : TTCTTCAGTTTCTTCCCCTGATTCTTCTTCTCCTTCTTCCTCCCTCGATTGTTCTTCTTCTTCTTCCTGGGATTCCTCCACCAATTCTTGTTCTTCAGAGGACGATGCAGAAGGAGGCTGGTCTACTAAGCGGGATTTGGTTTTGGGGGCCATTGTTTCTGAAAGCAAGAAAAGAGAGCTATTCGGCCAACAGCTATGTCTATGGTGAG</gDNA_template>
            <first_frame> R  F  G  T  *  P  I  L  A  V  G  L  R  R  K  L  E  L  L  S  G  F  D  W  F  L  S  D  G  S  L  H  N  W  R :   I  R  A  W  D  S :   H   : F  L  Q  F  L  P  L  I  L  L  L  L  L  P  P  S  I  V  L  L  L  L  P  G  I  P  P  P  I  L  V  L  Q  R  T  M  Q  K  E  A  G  L  L  S  G  I  W  F  W  G  P  L  F  L  K  A  R  K  E  S  Y  S  A  N  S  Y  V  Y  G  E </first_frame>
            <second_frame>  D  S  E  P  D  P  F  S  L  S  D  S  E  E  N  W  S  F  *  A  V  L  T  G  F  *  V  M  D  L  F  T  T  G   : G  S  E  H  G  T   : V  I  :  F  F  S  F  F  P  *  F  F  F  S  F  F  L  P  R  L  F  F  F  F  F  L  G  F  L  H  Q  F  L  F  F  R  G  R  C  R  R  R  L  V  Y  *  A  G  F  G  F  G  G  H  C  F  *  K  Q  E  K  R  A  I  R  P  T  A  M  S  M  V   </second_frame>
            <third_frame>   I  R  N  L  T  H  S  R  C  R  T  Q  K  K  I  G  A  S  E  R  F  *  L  V  S  E  *  W  I  S  S  Q  L  E  :  D  Q  S  M  G  Q  :  S  F :   S  S  V  S  S  P  D  S  S  S  P  S  S  S  L  D  C  S  S  S  S  S  W  D  S  S  T  N  S  C  S  S  E  D  D  A  E  G  G  W  S  T  K  R  D  L  V  L  G  A  I  V  S  E  S  K  K  R  E  L  F  G  Q  Q  L  C  L  W  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="136694" stop="136606"/>
                    <exon start="129680" stop="129663"/>
                    <exon start="126642" stop="126638"/>
                    <exon start="125669" stop="125461"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>321</number_coding_nucleotides>
                  <number_encoded_amino_acids>107</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PILAVGLRRKLELLSGFDWFLSDGSLHNWRIRAWDSHFLQFLPLILLLLLPPSIVLLLLPGIPPPILVLQRTMQKEAGLLSGIWFWGPLFLKARKESYSANSYVYGE</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="136626" stop="136606"/>
                    <exon start="129680" stop="129663"/>
                    <exon start="126642" stop="126638"/>
                    <exon start="125669" stop="125462"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>249</number_coding_nucleotides>
                  <number_encoded_amino_acids>83</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>WISSQLEDQSMGQSFSSVSSPDSSSPSSSLDCSSSSSWDSSTNSCSSEDDAEGGWSTKRDLVLGAIVSESKKRELFGQQLCLW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="136369" PGL_stop="137826"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="136369" e_stop="137826"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="136369" e_stop="137826" e_length="1458"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="136369" stop="137825"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746382" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="136407" stop="137141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347389" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="136407" stop="137125"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347680" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="136422" stop="136993"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E323100" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="136439" stop="136991"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E300878" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="137144" stop="137826"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E556431" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="137144" stop="137825"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551899" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="137264" stop="137825"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279440" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="137439" stop="137824"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243207" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGCACAAAGGCCTTTCATCTTTTTGTCTTTGCTTCATCACTCACCATAGACACCGACGACGGCCGAATAGCTCTCTCTTCTTGCTTTCAGAAACAATGGCCCCCAAAACCAAATCCCGCTTAGTAGACCAACCTCCTTCTGCATCATCTTCTGAAGAACAAGAATTGGTGGAGGAATGCCAGGAAGAAGAAGAACAACAACAACAATCGAGGGAAGAAACTGAAGAAGAAGAAGAACCTCCAGTTGTGAAGAGATCCATCACTCAGAAACCAGTCAAAACCGCTCAGAAGCTCCAATTTTCTTCTGAGTCCGACAGCGAGAATGGGTCAGGTTCCGAATCGAAAAAATCGGATCATTCCCCGCCTTCCCCTTTTGTATCAGATTTCACCATTAAGCCGATTGTTTCTGCCCCATCGAAATCAGCAGGAAAGAGGCCGCAAGAAGCCCAGAAAGAGAAAGGGAGGAAGAAGCCCAAGATTGCTGAAGAAGAGGATAAAAAATCAGCTGCTACTCCTCGCAGTCTATGGAGCGATGACGACCAGCTTGCTCTGCTCAAAGGTATTGCTGAATACAAGACGGTAAAAGGCATGGAACCTAATGCGGATATGACAGCTTTTCATGAATTCATTAGAGGAAAGTTGCAGGTTGAGGTTTCAAAGAGTCAACTCAGTGAAAAGATAAAGAGGTTAAAGAAGAAATTTTTTACTAATGCGAAAGGTGATGAGGAGCCAGTTTTCATGAAGGGTCAGGATTTTTTAGTTTTTCAGCATTCAAAGAGGATTTGGGGTGCCCCTGGAACTAGTAGTGGAGTTAAGGAGATTGTTACCAATAGCACTAATGGCAAAGCTAAAAAGACTGTTGAGGCTAAGAAGAGTTCTGAACCTAAGAAAAGTGGTAAAGTTAGCAAACACAAGGATGATGAGGAACATAAGGAAGAAGAGAAACAGGTTGCTGTTAAAGAGGTGGTTAAAGAGGATATAGTTAAGGGTGATCAACAGGATTTCCAATCCGAATATCCACGTTTGGCTGCATCATTTGAAAGTATGTCTGGCATGTTTACTATTTACCCAAATGGAACAAGTTTTTTGAAGGAAAAGATGAGTTTGATTGCTCCTGACAAGGCTAAAGTATTGGAGGAGAAGTGGAAGAAACTGGAGGATGATGAAGCTGCCTTGATGGTGAAGCGCTTAGATTTGATTGCGGAGCATTACAGATTGGTGGTTGATGCAATGAGAGGTAACTAGATGCTGATGGATGATGTTTCTATTTCGAACCGACAAGTTCTGATACTGTTTTGGTGGACTTTTAGATTTTGTTTCATGTAGTCTTGTTTCTCAAGGCAATTTCTTCTCGCGTTGATGTACTAATGTTTAGTCGGCGAGGTAGATTTAGTTTTTCAGGTTGATTCATACATTTTATTGCTTCTTTAGTTTTACTAGTGAACTGTTTGGATGATGA</gDNA_template>
            <first_frame> C  T  K  A  F  H  L  F  V  F  A  S  S  L  T  I  D  T  D  D  G  R  I  A  L  S  S  C  F  Q  K  Q  W  P  P  K  P  N  P  A  *  *  T  N  L  L  L  H  H  L  L  K  N  K  N  W  W  R  N  A  R  K  K  K  N  N  N  N  N  R  G  K  K  L  K  K  K  K  N  L  Q  L  *  R  D  P  S  L  R  N  Q  S  K  P  L  R  S  S  N  F  L  L  S  P  T  A  R  M  G  Q  V  P  N  R  K  N  R  I  I  P  R  L  P  L  L  Y  Q  I  S  P  L  S  R  L  F  L  P  H  R  N  Q  Q  E  R  G  R  K  K  P  R  K  R  K  G  G  R  S  P  R  L  L  K  K  R  I  K  N  Q  L  L  L  L  A  V  Y  G  A  M  T  T  S  L  L  C  S  K  V  L  L  N  T  R  R  *  K  A  W  N  L  M  R  I  *  Q  L  F  M  N  S  L  E  E  S  C  R  L  R  F  Q  R  V  N  S  V  K  R  *  R  G  *  R  R  N  F  L  L  M  R  K  V  M  R  S  Q  F  S  *  R  V  R  I  F  *  F  F  S  I  Q  R  G  F  G  V  P  L  E  L  V  V  E  L  R  R  L  L  P  I  A  L  M  A  K  L  K  R  L  L  R  L  R  R  V  L  N  L  R  K  V  V  K  L  A  N  T  R  M  M  R  N  I  R  K  K  R  N  R  L  L  L  K  R  W  L  K  R  I  *  L  R  V  I  N  R  I  S  N  P  N  I  H  V  W  L  H  H  L  K  V  C  L  A  C  L  L  F  T  Q  M  E  Q  V  F  *  R  K  R  *  V  *  L  L  L  T  R  L  K  Y  W  R  R  S  G  R  N  W  R  M  M  K  L  P  *  W  *  S  A  *  I  *  L  R  S  I  T  D  W  W  L  M  Q  *  E  V  T  R  C  *  W  M  M  F  L  F  R  T  D  K  F  *  Y  C  F  G  G  L  L  D  F  V  S  C  S  L  V  S  Q  G  N  F  F  S  R  *  C  T  N  V  *  S  A  R  *  I  *  F  F  R  L  I  H  T  F  Y  C  F  F  S  F  T  S  E  L  F  G  *  * </first_frame>
            <second_frame>  A  Q  R  P  F  I  F  L  S  L  L  H  H  S  P  *  T  P  T  T  A  E  *  L  S  L  L  A  F  R  N  N  G  P  Q  N  Q  I  P  L  S  R  P  T  S  F  C  I  I  F  *  R  T  R  I  G  G  G  M  P  G  R  R  R  T  T  T  T  I  E  G  R  N  *  R  R  R  R  T  S  S  C  E  E  I  H  H  S  E  T  S  Q  N  R  S  E  A  P  I  F  F  *  V  R  Q  R  E  W  V  R  F  R  I  E  K  I  G  S  F  P  A  F  P  F  C  I  R  F  H  H  *  A  D  C  F  C  P  I  E  I  S  R  K  E  A  A  R  S  P  E  R  E  R  E  E  E  A  Q  D  C  *  R  R  G  *  K  I  S  C  Y  S  S  Q  S  M  E  R  *  R  P  A  C  S  A  Q  R  Y  C  *  I  Q  D  G  K  R  H  G  T  *  C  G  Y  D  S  F  S  *  I  H  *  R  K  V  A  G  *  G  F  K  E  S  T  Q  *  K  D  K  E  V  K  E  E  I  F  Y  *  C  E  R  *  *  G  A  S  F  H  E  G  S  G  F  F  S  F  S  A  F  K  E  D  L  G  C  P  W  N  *  *  W  S  *  G  D  C  Y  Q  *  H  *  W  Q  S  *  K  D  C  *  G  *  E  E  F  *  T  *  E  K  W  *  S  *  Q  T  Q  G  *  *  G  T  *  G  R  R  E  T  G  C  C  *  R  G  G  *  R  G  Y  S  *  G  *  S  T  G  F  P  I  R  I  S  T  F  G  C  I  I  *  K  Y  V  W  H  V  Y  Y  L  P  K  W  N  K  F  F  E  G  K  D  E  F  D  C  S  *  Q  G  *  S  I  G  G  E  V  E  E  T  G  G  *  *  S  C  L  D  G  E  A  L  R  F  D  C  G  A  L  Q  I  G  G  *  C  N  E  R  *  L  D  A  D  G  *  C  F  Y  F  E  P  T  S  S  D  T  V  L  V  D  F  *  I  L  F  H  V  V  L  F  L  K  A  I  S  S  R  V  D  V  L  M  F  S  R  R  G  R  F  S  F  S  G  *  F  I  H  F  I  A  S  L  V  L  L  V  N  C  L  D  D   </second_frame>
            <third_frame>   H  K  G  L  S  S  F  C  L  C  F  I  T  H  H  R  H  R  R  R  P  N  S  S  L  F  L  L  S  E  T  M  A  P  K  T  K  S  R  L  V  D  Q  P  P  S  A  S  S  S  E  E  Q  E  L  V  E  E  C  Q  E  E  E  E  Q  Q  Q  Q  S  R  E  E  T  E  E  E  E  E  P  P  V  V  K  R  S  I  T  Q  K  P  V  K  T  A  Q  K  L  Q  F  S  S  E  S  D  S  E  N  G  S  G  S  E  S  K  K  S  D  H  S  P  P  S  P  F  V  S  D  F  T  I  K  P  I  V  S  A  P  S  K  S  A  G  K  R  P  Q  E  A  Q  K  E  K  G  R  K  K  P  K  I  A  E  E  E  D  K  K  S  A  A  T  P  R  S  L  W  S  D  D  D  Q  L  A  L  L  K  G  I  A  E  Y  K  T  V  K  G  M  E  P  N  A  D  M  T  A  F  H  E  F  I  R  G  K  L  Q  V  E  V  S  K  S  Q  L  S  E  K  I  K  R  L  K  K  K  F  F  T  N  A  K  G  D  E  E  P  V  F  M  K  G  Q  D  F  L  V  F  Q  H  S  K  R  I  W  G  A  P  G  T  S  S  G  V  K  E  I  V  T  N  S  T  N  G  K  A  K  K  T  V  E  A  K  K  S  S  E  P  K  K  S  G  K  V  S  K  H  K  D  D  E  E  H  K  E  E  E  K  Q  V  A  V  K  E  V  V  K  E  D  I  V  K  G  D  Q  Q  D  F  Q  S  E  Y  P  R  L  A  A  S  F  E  S  M  S  G  M  F  T  I  Y  P  N  G  T  S  F  L  K  E  K  M  S  L  I  A  P  D  K  A  K  V  L  E  E  K  W  K  K  L  E  D  D  E  A  A  L  M  V  K  R  L  D  L  I  A  E  H  Y  R  L  V  V  D  A  M  R  G  N  *  M  L  M  D  D  V  S  I  S  N  R  Q  V  L  I  L  F  W  W  T  F  R  F  C  F  M  *  S  C  F  S  R  Q  F  L  L  A  L  M  Y  *  C  L  V  G  E  V  D  L  V  F  Q  V  D  S  Y  I  L  L  L  L  *  F  Y  *  *  T  V  W  M  M  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="136371" stop="137612"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1239</number_coding_nucleotides>
                  <number_encoded_amino_acids>413</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HKGLSSFCLCFITHHRHRRRPNSSLFLLSETMAPKTKSRLVDQPPSASSSEEQELVEECQEEEEQQQQSREETEEEEEPPVVKRSITQKPVKTAQKLQFSSESDSENGSGSESKKSDHSPPSPFVSDFTIKPIVSAPSKSAGKRPQEAQKEKGRKKPKIAEEEDKKSAATPRSLWSDDDQLALLKGIAEYKTVKGMEPNADMTAFHEFIRGKLQVEVSKSQLSEKIKRLKKKFFTNAKGDEEPVFMKGQDFLVFQHSKRIWGAPGTSSGVKEIVTNSTNGKAKKTVEAKKSSEPKKSGKVSKHKDDEEHKEEEKQVAVKEVVKEDIVKGDQQDFQSEYPRLAASFESMSGMFTIYPNGTSFLKEKMSLIAPDKAKVLEEKWKKLEDDEAALMVKRLDLIAEHYRLVVDAMRGN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="-" PGL_start="137815" PGL_stop="137005"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="137815" e_stop="137005"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.930"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.930">
            <gDNA_exon_boundary e_start="137815" e_stop="137005" e_length="811"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="137815" stop="137005"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E432698" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACAGTTCACTAGTAAAACTAAAGAAGCAATAAAATGTATGAATCAACCTGAAAAACTAAATCTACCTCGCCGACTAAACATTAGTACATCAACGCGAGAAGAAATTGCCTTGAGAAACAAGACTACATGAAACAAAATCTAAAAGTCCACCAAAACAGTATCAGAACTTGTCGGTTCGAAATAGAAACATCATCCATCAGCATCTAGTTACCTCTCATTGCATCAACCACCAATCTGTAATGCTCCGCAATCAAATCTAAGCGCTTCACCATCAAGGCAGCTTCATCATCCTCCAGTTTCTTCCACTTCTCCTCCAATACTTTAGCCTTGTCAGGAGCAATCAAACTCATCTTTTCCTTCAAAAAACTTGTTCCATTTGGGTAAATAGTAAACATGCCAGACATACTTTCAAATGATGCAGCCAAACGTGGATATTCGGATTGGAAATCCTGTTGATCACCCTTAACTATATCCTCTTTAACCACCTCTTTAACAGCAACCTGTTTCTCTTCTTCCTTATGTTCCTCATCATCCTTGTGTTTGCTAACTTTACCACTTTTCTTAGGTTCAGAACTCTTCTTAGCCTCAACAGTCTTTTTAGCTTTGCCATTAGTGCTATTGGTAACAATCTCCTTAACTCCACTACTAGTTCCAGGGGCACCCCAAATCCTCTTTGAATGCTGAAAAACTAAAAAATCCTGACCCTTCATGAAAACTGGCTCCTCATCACCTTTCGCATTAGTAAAAAATTTCTTCTTTAACCTCTTTATCTTTTCACTGAGTTGACTCTTTGAAACCTCAACCTGCAACT</gDNA_template>
            <first_frame> T  V  H  *  *  N  *  R  S  N  K  M  Y  E  S  T  *  K  T  K  S  T  S  P  T  K  H  *  Y  I  N  A  R  R  N  C  L  E  K  Q  D  Y  M  K  Q  N  L  K  V  H  Q  N  S  I  R  T  C  R  F  E  I  E  T  S  S  I  S  I  *  L  P  L  I  A  S  T  T  N  L  *  C  S  A  I  K  S  K  R  F  T  I  K  A  A  S  S  S  S  S  F  F  H  F  S  S  N  T  L  A  L  S  G  A  I  K  L  I  F  S  F  K  K  L  V  P  F  G  *  I  V  N  M  P  D  I  L  S  N  D  A  A  K  R  G  Y  S  D  W  K  S  C  *  S  P  L  T  I  S  S  L  T  T  S  L  T  A  T  C  F  S  S  S  L  C  S  S  S  S  L  C  L  L  T  L  P  L  F  L  G  S  E  L  F  L  A  S  T  V  F  L  A  L  P  L  V  L  L  V  T  I  S  L  T  P  L  L  V  P  G  A  P  Q  I  L  F  E  C  *  K  T  K  K  S  *  P  F  M  K  T  G  S  S  S  P  F  A  L  V  K  N  F  F  F  N  L  F  I  F  S  L  S  *  L  F  E  T  S  T  C  N  </first_frame>
            <second_frame>  Q  F  T  S  K  T  K  E  A  I  K  C  M  N  Q  P  E  K  L  N  L  P  R  R  L  N  I  S  T  S  T  R  E  E  I  A  L  R  N  K  T  T  *  N  K  I  *  K  S  T  K  T  V  S  E  L  V  G  S  K  *  K  H  H  P  S  A  S  S  Y  L  S  L  H  Q  P  P  I  C  N  A  P  Q  S  N  L  S  A  S  P  S  R  Q  L  H  H  P  P  V  S  S  T  S  P  P  I  L  *  P  C  Q  E  Q  S  N  S  S  F  P  S  K  N  L  F  H  L  G  K  *  *  T  C  Q  T  Y  F  Q  M  M  Q  P  N  V  D  I  R  I  G  N  P  V  D  H  P  *  L  Y  P  L  *  P  P  L  *  Q  Q  P  V  S  L  L  P  Y  V  P  H  H  P  C  V  C  *  L  Y  H  F  S  *  V  Q  N  S  S  *  P  Q  Q  S  F  *  L  C  H  *  C  Y  W  *  Q  S  P  *  L  H  Y  *  F  Q  G  H  P  K  S  S  L  N  A  E  K  L  K  N  P  D  P  S  *  K  L  A  P  H  H  L  S  H  *  *  K  I  S  S  L  T  S  L  S  F  H  *  V  D  S  L  K  P  Q  P  A  T </second_frame>
            <third_frame>   S  S  L  V  K  L  K  K  Q  *  N  V  *  I  N  L  K  N  *  I  Y  L  A  D  *  T  L  V  H  Q  R  E  K  K  L  P  *  E  T  R  L  H  E  T  K  S  K  S  P  P  K  Q  Y  Q  N  L  S  V  R  N  R  N  I  I  H  Q  H  L  V  T  S  H  C  I  N  H  Q  S  V  M  L  R  N  Q  I  *  A  L  H  H  Q  G  S  F  I  I  L  Q  F  L  P  L  L  L  Q  Y  F  S  L  V  R  S  N  Q  T  H  L  F  L  Q  K  T  C  S  I  W  V  N  S  K  H  A  R  H  T  F  K  *  C  S  Q  T  W  I  F  G  L  E  I  L  L  I  T  L  N  Y  I  L  F  N  H  L  F  N  S  N  L  F  L  F  F  L  M  F  L  I  I  L  V  F  A  N  F  T  T  F  L  R  F  R  T  L  L  S  L  N  S  L  F  S  F  A  I  S  A  I  G  N  N  L  L  N  S  T  T  S  S  R  G  T  P  N  P  L  *  M  L  K  N  *  K  I  L  T  L  H  E  N  W  L  L  I  T  F  R  I  S  K  K  F  L  L  *  P  L  Y  L  F  T  E  L  T  L  *  N  L  N  L  Q   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="-"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="137399" stop="137139"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>258</number_coding_nucleotides>
                  <number_encoded_amino_acids>86</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CSQTWIFGLEILLITLNYILFNHLFNSNLFLFFLMFLIILVFANFTTFLRFRTLLSLNSLFSFAISAIGNNLLNSTTSSRGTPNPL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="-"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="137359" stop="137132"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SPLTISSLTTSLTATCFSSSLCSSSSLCLLTLPLFLGSELFLASTVFLALPLVLLVTISLTPLLVPGAPQILFEC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 194 chains have been computed
$ 
$ memory statistics:
$ 254384 bytes spliced alignments in total
$ 92 spliced alignments have been stored
$ 2765 bytes was the average size of a spliced alignment
$ 26728 bytes predicted gene locations in total
$ 16 predicted gene locations have been stored
$ 1670 bytes was the average size of a predicted gene location
$ 2 megabytes was the average size of the backtrace matrix
$ 222 backtrace matrices have been allocated
$ 
$ date finished: 2008-11-13 23:15:19
-->
