<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2008-11-23 23:15:41"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C07SLm0137M12-GUJ3m/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C07SLm0137M12-GUJ3m/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-GUJ3m/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335343" ref_strand="+" ref_description="SGN-U335343        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr3:7701139-7703328 REVERSE | Aliases: MSD21.24, MSD21_24(evalue: 5e-07, score=52) genbank/nr: gi|42565097|ref|NP_566696.2| expressed protein [Arabidopsis thaliana] >gi|17381010|gb|AAL36317.1| unknown protein [Arabidopsis thaliana] >gi|20465875|gb|AAM20042.1| unknown protein [Arabidopsis thaliana] (evalue: 4e-05, score=52)">
      <seq>tcctcgaaggctgcgattcgctgtccctatttgtcaatttcatatttatttccatcaaaaacttggactacaaagtcacggtggagaccgccggaaaagctgaaagctcgattcatcggtcaccggaaactcaaccgacgaagacaactaggaggaggtggaggagccaaatttgctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-GUJ3m/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="4427" stop="3649"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4127" g_stop="3949" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="179" r_length="179" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-U335343" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>179</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335343" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4127" e_stop="3949"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTCGAAGGCTGCGATTCGCTGTCCCTATTTGTCAATTTCATATTTATTTCCATCAAAAACTTGGACTACAAAGTCACGGTGGAGACCGCCGGAAAAGCTGAAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGA</genome_strand>
        <mrna_strand>TCCTCGAAGGCTGCGATTCGCTGTCCCTATTTGTCAATTTCATATTTATTTCCATCAAAAACTTGGACTACAAAGTCACGGTGGAGACCGCCGGAAAAGCTGAAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-GUJ3m/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U326092" ref_strand="+" ref_description="SGN-U326092        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: | Symbol: None | cyclin family protein, similar to cyclin 2 (Trypanosoma brucei) GI:7339572, cyclin 6 (Trypanosoma cruzi) GI:12005317; contains Pfam profile PF00134: Cyclin, N-terminal domain | chr3:7703878-7704836 REVERSE | Aliases: MEK6.1(evalue: 2e-56, score=216) genbank/nr: gi|52627113|gb|AAU84683.1| At3g21870 [Arabidopsis thaliana] >gi|48310144|gb|AAT41762.1| At3g21870 [Arabidopsis thaliana] >gi|9294285|dbj|BAB02187.1| PREG1-like negative regulator-like protein [Arabidopsis thaliana] >gi|15233185|ref|NP_188825.1| cyclin family protein [Arabidopsis thaliana] (evalue: 1e-54, score=216)">
      <seq>catacatcagttccattaatttagatgcttcacgagggtggcagtgacgaattccaccgccggccggacccgagcgcggacgatgtagccacccctcgggtcctaaccatcttgtcgtatgtgctcgaaaagctcgtagcaaggaatgatcaattgttattattaggccgccaggttggtcatgataatgaactcatgagcaacggggcaggcggcccacggagggtactagggaagaattttaatgcgtttcatggggttcgagcgccgaatataagtatacccaagtatttagagaggttatataagtatacgaattgtagcccgtcttgttttgtggtgggatatgtgtatattgatagattggggcataagtatccagattctctattggtttctttgaatgtgcataggctgcttgttactagtgttatggttgcttccaaaatgctcgatgatgcacactataacaatgcattctatgcccgagttggaggagtaagcaatgcggaattaaacaagttggagttggagctacttttcttgttagattttggagtaaatatgagtgcacgagttttcgaaagttattgccagtatttggagagggaaatgttgagcaatggaccaaccctcaagattgaaaagtcagctattaatagcattactactagtactgtagatgatgccactgaaatttcagtagaagacattgatcatacttcttcaccatcacaattgttagattaaatttacgtgacaacaataaattctaatgaaattattcaataaaatgtaaaagtacttgtctctatgttactctttctatattcggataaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-GUJ3m/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="6695" stop="4634"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6395" g_stop="5935" g_length="461"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="461" r_length="461" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="5934" i_stop="5311" i_length="624">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5310" g_stop="4925" g_length="386"/>
          <reference_exon_boundary r_type="cDNA" r_start="462" r_stop="847" r_length="386" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-U326092" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>847</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U326092" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6395" e_stop="5935"/>
          <exon e_start="5310" e_stop="4925"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAACATCAGTTCCATTAATTTAGATGCTTCACGAGGGTGGCAGTGACGAATTCCACCGCCGGCCGGACCCGAGCGCGGACGATGTAGCCACCCCTCGGGTCCTAACCATCTTGTCGTATGTGCTCGAAAAGCTCGTAGCAAGGAATGATCAATTGTTATTATTAGGCCGCCAGGTTGGTCATGATAATGAACTCATGAGCAACGGGGCAGGCGGCCCACGGAGGGTACTAGGGAAGAATTTTAATGCGTTTCATGGGGTTCGAGCGCCGAATATAAGTATACCCAAGTATTTAGAGAGGTTATATAAGTATACGAATTGTAGCCCGTCTTGTTTTGTGGTGGGATATGTGTATATTGATAGATTGGGGCATAAGTATCCAGATTCTCTATTGGTTTCTTTGAATGTGCATAGGCTGCTTGTTACTAGTGTTATGGTTGCTTCCAAAATGCTCGATGATGCGTAAGTACTTCTCTCTGCTTTCTCTAGACATGTTCGATAAATATTATTTGAATCTGTTTGAATTTATTTAACTTAATTTGAAGTATGATAATCAAGTTAATTAATATTAAGTGTGAATTCAGATATAGAATCTTTTATTTCTTATATCTTATTGTAACTTTCAAAAGATTAAATTCATTACCTAATTTTCAATCATTAATTGCTTTTGTATTCTTGTTACTTTATTTTAATATCATAGATTTAATGTCATTTTAAGAAGTGCTGTAATATAACATATATATGTATGCAACATCTTGTATAGTGTGTGTTTGGGGGAGGGGAATGTGGAGTGACTAAAGGGCTTGATATCCCTTTTTAGAACTACACAAGGTTAACTTATAAGTGCAAACTACCTATTTATTGAAATAACTTAGTAATAAAGAAATAGACTTCATGCTTTTGGTTCGGGTCGATGAAATTGTAAAATTATACGATTTATCATCGAAGGGTATAATAATACTACCCTTGGGACAATTGTGAGGAATAGTTATTTCACAACAATCATCTGATTTCTCTTCTTTTGTTTCGCCTTTTCAGAAAATATAGAGTCACTTTAATTCTTTTTGTTGTTAACATGTATTTCAGACACTATAACAATGCATTCTATGCCCGAGTTGGAGGAGTAAGCAATGCGGAATTAAACAAGTTGGAGTTGGAGCTACTTTTCTTGTTAGATTTTGGAGTAAATATGAGTGCACGAGTTTTCGAAAGTTATTGCCAGTATTTGGAGAGGGAAATGTTGAGCAATGGACCAACCCTCAAGATTGAAAAGTCAGCTATTAATAGCATTACTACTAGTACTGTAGATGATGCCACTGAAATTTCAGTAGAAGACATTGATCATACTTCTTCACCATCACAATTGTTAGATTAAATTTACGTGACAACAATAAATTCTAATGAAATTATTCAATAAAATGTAAAAGTACTTGTCTCTATGTTACTCTTTCTATATTCGTATAGCTGATCTT</genome_strand>
        <mrna_strand>CATACATCAGTTCCATTAATTTAGATGCTTCACGAGGGTGGCAGTGACGAATTCCACCGCCGGCCGGACCCGAGCGCGGACGATGTAGCCACCCCTCGGGTCCTAACCATCTTGTCGTATGTGCTCGAAAAGCTCGTAGCAAGGAATGATCAATTGTTATTATTAGGCCGCCAGGTTGGTCATGATAATGAACTCATGAGCAACGGGGCAGGCGGCCCACGGAGGGTACTAGGGAAGAATTTTAATGCGTTTCATGGGGTTCGAGCGCCGAATATAAGTATACCCAAGTATTTAGAGAGGTTATATAAGTATACGAATTGTAGCCCGTCTTGTTTTGTGGTGGGATATGTGTATATTGATAGATTGGGGCATAAGTATCCAGATTCTCTATTGGTTTCTTTGAATGTGCATAGGCTGCTTGTTACTAGTGTTATGGTTGCTTCCAAAATGCTCGATGATGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACTATAACAATGCATTCTATGCCCGAGTTGGAGGAGTAAGCAATGCGGAATTAAACAAGTTGGAGTTGGAGCTACTTTTCTTGTTAGATTTTGGAGTAAATATGAGTGCACGAGTTTTCGAAAGTTATTGCCAGTATTTGGAGAGGGAAATGTTGAGCAATGGACCAACCCTCAAGATTGAAAAGTCAGCTATTAATAGCATTACTACTAGTACTGTAGATGATGCCACTGAAATTTCAGTAGAAGACATTGATCATACTTCTTCACCATCACAATTGTTAGATTAAATTTACGTGACAACAATAAATTCTAATGAAATTATTCAATAAAATGTAAAAGTACTTGTCTCTATGTTACTCTTTCTATATTCGGATAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-GUJ3m/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U332164" ref_strand="+" ref_description="SGN-U332164        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | fringe-related protein, weak similarity to Fringe (Schistocerca gregaria)(GI:6573138);Fringe encodes an extracellular protein that regulates Notch signalling. | chr4:8703075-8705378 REVERSE | Aliases: DL3665C, FCAALL.244(evalue: 2e-11, score=65.5) genbank/nr: hypothetical(evalue: 9e-10, score=65.5)">
      <seq>aatgcctatggttccaagattcattcgtacacaaaatcgtctcaaagatcttctcttaatcttctccacacttgttatcttctacctcatcttccttcttcatcacatccagacccccaaaacttccttcaatccaaatcccaatttctccaaaaccctttcaacttccactaatctttcaatctcacacctcttcttctcaattgccgcttcttcttcctctttctctaaccgtctctcttacattaacctctggtacaaacccaattccacaaacgccgtcgttttccttgacgacccgatttccatttctaccctctctgattcatcacccccaattcttgtttcatcggatacttctaagtttccttattcattcccggcgggccgtcgatcggcgattcggattgctcgtattgttaaagatacttttgatttggctaaaaatgtgaactttaatgatacccgctggattgtttttggggatgatgatactgatttcgttacggata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-GUJ3m/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="29388" stop="30499"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29688" g_stop="30199" g_length="512"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="512" r_length="512" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-U332164" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>512</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U332164" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29688" e_stop="30199"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGCCTATGGTTCCAAGATTCATTCATACACAAAATCGTCTCAAAGATCTTCTCTTAATCTTCTCCACACTTGTTATCTTCTACCTCATCTTCCTTCTTCATCACATCCAGACCCCCAAAACTTCCTTCAATCCAAATCCCAATTTCTCCAAAACCCTTTCAACTTCCACTAATCTTTCAATCTCACACCTCTTCTTCTCAATTGCCGCTTCTTCTTCCTCTTTCTCTAACCGTCTCTCTTACATTAACCTCTGGTACAAACCCAATTCCACAAACGCCGTCGTTTTCCTTGACGACCCGATTTCCATTTCTACCCTCTCTGTTTCATCACCCCCAATTCTTGTTTCATCGGATACTTCTAAGTTTCCTTATTCATTCCCGGCGGGCCGTCGTTCGGCGATTCGGATTGCTCGTATTGTTAAAGATACTTTTGATTTGGTTAAAAATGTGAACTTTAATGATACCCGTTGGTTTGTTTTTGGGGATGATGATACTGTTTTCTTTACGGATA</genome_strand>
        <mrna_strand>AATGCCTATGGTTCCAAGATTCATTCGTACACAAAATCGTCTCAAAGATCTTCTCTTAATCTTCTCCACACTTGTTATCTTCTACCTCATCTTCCTTCTTCATCACATCCAGACCCCCAAAACTTCCTTCAATCCAAATCCCAATTTCTCCAAAACCCTTTCAACTTCCACTAATCTTTCAATCTCACACCTCTTCTTCTCAATTGCCGCTTCTTCTTCCTCTTTCTCTAACCGTCTCTCTTACATTAACCTCTGGTACAAACCCAATTCCACAAACGCCGTCGTTTTCCTTGACGACCCGATTTCCATTTCTACCCTCTCTGATTCATCACCCCCAATTCTTGTTTCATCGGATACTTCTAAGTTTCCTTATTCATTCCCGGCGGGCCGTCGATCGGCGATTCGGATTGCTCGTATTGTTAAAGATACTTTTGATTTGGCTAAAAATGTGAACTTTAATGATACCCGCTGGATTGTTTTTGGGGATGATGATACTGATTTCGTTACGGATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-GUJ3m/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U327851" ref_strand="+" ref_description="SGN-U327851        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | fringe-related protein, weak similarity to Fringe (Schistocerca gregaria)(GI:6573138);Fringe encodes an extracellular protein that regulates Notch signalling. | chr4:8703075-8705378 REVERSE | Aliases: DL3665C, FCAALL.244(evalue: 9e-87, score=316) genbank/nr: hypothetical(evalue: 6e-85, score=316)">
      <seq>gatgatgatactgttttctttacggataatttggttagagttttgtcgaaatatgattgtgagaagtggtattatgttgggtataattcggagagttttgagcaaaatgagaagtattcatttgatatggcatttggagggggtgggtttgcacttagtgctccattggctaaggttttagctagggttttggattcttgtttgattaggtaccctcatttgtatggaagtgattccaggattttttcttgtgtagctgagctcggagtacatttgactcatgaacctggattccaccaggttgatgtccgaggaaatctgtttggtatccttgctgcacatccattatcacctttgttatcacttcatcacttggacgtcgtggagccactttttcctggcatgactaggattcaagcagtggaccatcttttccaagctgtccatgctgatccagctaggattttggaacaaactgtgtgctatgacaagtccaatttactgaccgtttcagttgcatggggttatgccgttcaggtgtttgaagggaatcaacttcttccagatcttctctcgctgcagcgaacatttacaccatggaaaaggggtaaaaatgtttctggcagctatatgctcaacactagagtcaatcctagtgatccatgcaaaaaacctgatgtcttcttcttgaaaaagtgctttctag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-GUJ3m/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="29872" stop="32036"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30172" g_stop="30471" g_length="300"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="300" r_length="300" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30472" i_stop="31329" i_length="858">
            <donor d_prob="0.951" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31330" g_stop="31736" g_length="407"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="706" r_length="406" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-U327851" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>707</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U327851" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30172" e_stop="30471"/>
          <exon e_start="31330" e_stop="31736"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGATGATACTGTTTTCTTTACGGATAATTTGGTTAGAGTTTTGTCGAAATATGATTGTGAGAAGTGGTATTATGTTGGGTATAATTCGGAGAGTTTTGAGCAAAATGAGAAGTATTCATTTGATATGGCATTTGGAGGGGGTGGGTTTGCACTTAGTGCTCCATTGGCTAAGGTTTTAGCTAGGGTTTTGGATTCTTGTTTGATTAGGTACCCTCATTTGTATGGAAGTGATTCCAGGATTTTTTCTTGTGTAGCTGAGCTCGGAGTACATTTGACTCATGAACCTGGATTCCACCAGGTGACTTTTCGTACACTCTACCCTCTCTAGACTCCTGTTGTGGGATTAAACGGGGTATGTTGTAGTTGTTGTGTCTGGGGTTTGGATTTCATTAACAAAACTTGAACTATAAACTAATAGAACAAGATGAATTTTGAAGCTGGTTTTCATGAGATAACCTTAAGGTTCATTTGTTAGATGTATGTATTCCTAATTTAGTGAAAATATGAGGCAAATGATAAAGCATGTTAGTACTATGTGAAATTTTGTCAAGTTTGCGTATCACTGGCAAATGTTTGAACTTTTGATATCTTTTGTTGATTTGATTAGCAGCATATTGAACGATGGCCAATCTGTTTAGCATGTTATCAAAGAACATAGCTGTTTTTTTTCCGTCAATTGTAGTTCTGCAATTGTGATGATAGTTGAAATAAGGCTCGTTTTGATACAAATAGTGTTTAATGTTTTTTATGTTTATACACCCTCCATCCTAAATTATGTGACAGTTTGAGTGTGCAGGGAGTTTAAGAAAGAACAACTTTTGAAACTTGTGGTCGCAAATAAGCCATATATATTTACTATCTCATTAAGGGTAAAATGAGAATTTTATAGTTAAGTTGTTACTAAATATAGAGAAGTGTTATTCTTTTTTGGGAAAGACTAAAAAGGAAATACTATATATTGGATGAGGGAGTAGTTTGGCATGCTACCTTATTGTGAGCTTACGAGTAACCTCACTTAACCTCAAATATTTTCTTTGCTAATGGAAGTTTAATGAACTGGCCTTTTGAGGGTGCTCATGTGAGTATATAAGCTACCTAGGATGTTCTTGATTTTAGTTTTGTGTTATTAAGTCGAAATTGCTTTCATTATAAATAGGTTGATGTCCGAGGAAATCTGTTTGGTATCCTTGCTGCACATCCATTATCACCTTTGTTATCACTTCATCACTTGGACGTCGTGGAGCCACTTTTTCCTGGCATGACTAGGATTCAAGCAGTGGACCATCTTTTCCAAGCTGTCCATGCTGATCCAGCTAGGATTTTGGAACAAACTGTGTGCTATGACAAGTCCAATTTACTGACCGTTTCAGTTGCATGGGGTTATGCCGTTCAGGTGTTTGAAGGGAATCAACTTCTTCCAGATCTTCTCTCGCTGCAGCGAACATTTACACCATGGAAAAGGGGTAAAAATGTTTCTGCAAGCTATATGCTCAACACTAGAGTCAATCCTAGTGATCCATGCAAAAAACCTGATGTCTTCTTCTTGAAAAAGGTGCTTTCTAG</genome_strand>
        <mrna_strand>GATGATGATACTGTTTTCTTTACGGATAATTTGGTTAGAGTTTTGTCGAAATATGATTGTGAGAAGTGGTATTATGTTGGGTATAATTCGGAGAGTTTTGAGCAAAATGAGAAGTATTCATTTGATATGGCATTTGGAGGGGGTGGGTTTGCACTTAGTGCTCCATTGGCTAAGGTTTTAGCTAGGGTTTTGGATTCTTGTTTGATTAGGTACCCTCATTTGTATGGAAGTGATTCCAGGATTTTTTCTTGTGTAGCTGAGCTCGGAGTACATTTGACTCATGAACCTGGATTCCACCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATGTCCGAGGAAATCTGTTTGGTATCCTTGCTGCACATCCATTATCACCTTTGTTATCACTTCATCACTTGGACGTCGTGGAGCCACTTTTTCCTGGCATGACTAGGATTCAAGCAGTGGACCATCTTTTCCAAGCTGTCCATGCTGATCCAGCTAGGATTTTGGAACAAACTGTGTGCTATGACAAGTCCAATTTACTGACCGTTTCAGTTGCATGGGGTTATGCCGTTCAGGTGTTTGAAGGGAATCAACTTCTTCCAGATCTTCTCTCGCTGCAGCGAACATTTACACCATGGAAAAGGGGTAAAAATGTTTCTGGCAGCTATATGCTCAACACTAGAGTCAATCCTAGTGATCCATGCAAAAAACCTGATGTCTTCTTCTTGAAAAA-GTGCTTTCTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-GUJ3m/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U344226" ref_strand="+" ref_description="SGN-U344226        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: hypothetical(evalue: 2e-07, score=59.3)">
      <seq>ttattgtagatgaccaattttttcttcgaatacgaaattaaattacaatacacacaaaaaaaatatttgaattttttttatttaaactaaggaatgaaagaaaaaaacaaaataagaataagaaactcaaattattataataaaagaagtcaaaaaataatttttgtatgaaaaaattaaaatataccttgaactttgatagaagaatcatatatatccctaaatattttttttaaaaaaaaattagaagtaacaaatataaatttaaaactaattttttaactttcgttaaatgaagggtatatgtgagccattttctaacggcaggggtatatgtgagccgtttgtataacgataagggcatatatgaaccacttttattacgagggatatatcagctctaaatgacaaagttgagaggtatatcagacccttttccctattttttaaaatttcatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-GUJ3m/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="40429" stop="41466"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40729" g_stop="41171" g_length="443"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="442" r_length="442" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-U344226" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>443</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U344226" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40729" e_stop="41171"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTGTAGATGACCAAATTTTTTCTTCGAATACGAAATTAAATTACAATATACACACAAAAAATAGTTTATTTTTTTTTATTTAAACTAAGGAATGAAAGAAAAAAAACAAAATAAGAATAAGAAACTCAAATAATTATAATAAAAGAAGTCAAAAAATAATTTTTGTATGAAAAAAATTAAAATATACCTTGAACTTTGATAGAAGAATCATATATACCCCTAAATAATTTTTTT-TTTAAAAA-TAGAAGTAACAAATATAAATTTAAAACTAATTTTTTAACTTCCGTTAAATGAAGGGTATATGTGAGCCATTTTGTAACGGCAGGGGTATATGTGAGCCGTTTGTATAACGATAAGGGCATATATGAGCCACTTTTATAACGAGGGGTATATCAGCTCTAAATGACAAAGTTGAGGAGTACATCAGACCCTTTTATTTA</genome_strand>
        <mrna_strand>TTATTGTAGATGACC-AATTTTTTCTTCGAATACGAAATTAAATTACAATACACACAAAAAAAATATTTGAATTTTTTTTATTTAAACTAAGGAATGAAAG-AAAAAAACAAAATAAGAATAAGAAACTCAAATTATTATAATAAAAGAAGTCAAAAAATAATTTTTGTATG-AAAAAATTAAAATATACCTTGAACTTTGATAGAAGAATCATATATATCCCTAAATATTTTTTTTAAAAAAAAATTAGAAGTAACAAATATAAATTTAAAACTAATTTTTTAACTTTCGTTAAATGAAGGGTATATGTGAGCCATTTTCTAACGGCAGGGGTATATGTGAGCCGTTTGTATAACGATAAGGGCATATATGAACCACTTTTATTACGAGGGATATATCAGCTCTAAATGACAAAGTTGAGAGGTATATCAGACCCTTTTCCCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-GUJ3m/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U319630" ref_strand="+" ref_description="SGN-U319630        Tomato 200607 #1 [12 ESTs aligned] arabidopsis/peptide: | Symbol: None | basic helix-loop-helix (bHLH) family protein, similar to unknown protein (pir :B71406) | chr5:22234286-22236830 FORWARD | Aliases: K5F14.2, K5F14_2(evalue: 8e-63, score=237) genbank/nr: Prefoldin;(evalue: 1e-64, score=249)">
      <seq>tggttttgtagtgtgcagagcaaaagggaagggggaaatttgaagaagggaattaggtcatggaggtcgattctagtgggaatcctaattggttatttgattatgagttgatgacggatattacttctgctgcatctgttaccgtcgctgagtttcagtctccggctactattgatttcagctggcctgctcaaacgatctatgcttcttctaatctcattactgaaacagattacacatttgcggattcagaagttagcaaggaggcaagctcacgaaagcggttaaaaagtgaatgttgcagctctccgagatctaaggcatgcagagagaaattgcggagggacagactgaatgagaggttcctcgcattgagctctgtccttgatcctggaaggccaccaaaaactgagaaagttgcaattctaagtgatgctcaaaggatgctgattgagctgcgaactgaaacccagaagctgaaggagtcaaatgaggagctgcaagagaagataaaagaacttaaggcagagaagaatgagctccgagatgaaaagcaaaggctaaaggaagaaaaggataatttggagcagcaggttaaaagcttagcttctaaagcaggatttctctcccatccttctgccatgggagctgcatttactgcacaaggacaagttgctgcaggcaacaaattgatgcctttcattggttatcccagtgttgcgatgtggcaattcatgcaacctgctgttgttgacacatctcaagatcatgtgctccgtcctccagttgcttaagctggatttgccaggtgacttgctactggagctttgttctttttgttgctcctgtgagtgctaaaagtgacaaacaactgagacaatttgctggttgtatttgtatgtctagcttttatgtatgtgtcagtcttgatggtttgcttaatcatgtatatggcgggtgtatactcacccgaaaaacaattatgtattatgattccctagatgggattccttctgaaataattaaacttggttgtatgcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-GUJ3m/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="48399" stop="43561"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48099" g_stop="47880" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="220" r_length="220" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47879" i_stop="46830" i_length="1050">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46829" g_stop="46767" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="283" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46766" i_stop="44828" i_length="1939">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44827" g_stop="44750" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="361" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44749" i_stop="44667" i_length="83">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.657" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="44666" g_stop="44504" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="362" r_stop="524" r_length="163" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="44503" i_stop="44385" i_length="119">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.679" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="44384" g_stop="43859" g_length="526"/>
          <reference_exon_boundary r_type="cDNA" r_start="525" r_stop="1050" r_length="526" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-U319630" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>1050</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U319630" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48099" e_stop="47880"/>
          <exon e_start="46829" e_stop="46767"/>
          <exon e_start="44827" e_stop="44750"/>
          <exon e_start="44666" e_stop="44504"/>
          <exon e_start="44384" e_stop="43859"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTTTTGTAGTGTGCAGAGCAAAAGGGAAGGGGGAAATTTGAAGAAGGGAATTAGGTCATGGAGGTCGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATGACGGATATTACTTCTGCTGCATCTGTTACCGTCGCTGAGTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACGATCTATGCTTCTTCTAATCTCATGTGAGTCTGCTCTTCCGCCCTTTTTTAATTCTTGTCAATTTGTTGTACAATTACTCTCATGGTCATTTTTTTTCTTTTCGAATGAGGCTTATATGGTTTGAACACGTGAAAAGGAGAGACAGTGACTTGAGTTGAAGGAGAAGTAAAGGGAGGCTGAAGAAATATTTGGAGAGGTGATTACACAAGACTTGATGCATCTTTAGATTACGAGGGGATGACCTTAGATAGGGATATGGAGGTCATGGATAGTGGTAGATGGGTTATTGGTAGTTGAGTGTTGTCTTACTTACGGAGGGATAGACTTGGTGGTAGTTTGGAGCATAGTATGTGCTTCTCCTTTCATAGCACTAGTATTAGTATTGCTTTGAATTGCTTTCCTTTCCTTTATTTGAACTGAGGATCTAGTGGAAACAATCTCTCTACCTCCACAAAGGTAGGGTAAGGTCTGCCTACACACTACTCTCTACATACTCCACTTGTGGGATTGCACTGAGATTGTTGTTGTTGTTGAATTTTAAAGAACAATAAAGAAAGTTTTATGTTAGGATTACAACTTCTCTTTTGACTTAAAACATGTGAGCTTTGTATATTAAATTCATTGAAATCGAGATGAAGGGGAAGGCGGAAGGTTGTGGTAAATTTGACACCTAGTTTCAAATAATCTTATCATAGAGTAGGAGGTAGCTTCAACAAGGAATTGTCACTTCAGCCAGTCTGTAGTTTGAAAAGTTGTTCCTTTCGAGCATAAGGAAAAAGTGCCTATCACTTTGTGTTGAGGTTATAGATTCCTCTCTAGATTACATTACTTTAAGATATAGAAAGACTGAAATTATGTTCGGTAAATATGTTTAGTAGGATTTATATCTATCAGCTTTTCCACCAAGGTTATTGTTAGTAATAACTATGAAAGACAAATGTCTAATCTTATGGGTGCGTACATGTTTAATGTCTCGAAAGGATGATGCAAAGTAGTGGGACATCAACACTTTACTGAAGCTGGTGCTTTGCTTTTACCATATCCATATTCTGATGGTCATCTATCTCTTTCAGTACTGAAACAGATTACACATTTGCGGATTCAGAAGTTAGCAAGGAGGCAAGCTCACGAAAGCGGTAAATAAATTATCCATTTCTTTTATATCATGGTTTGATAGGTTTGATGAACTCTTTTTATTACATTCTTCTTGTTTTAGAGATCTGGATCTGTTTATATATCCTATGTTCTAGTAAGGAGAAAACCTATTTGGCTATGGTTGTCCACTCTTAAATGTACTCATTTAAGAATTTTTCTTTCAAAATATGTGTATCCTACAACTATGTCACAGGCTAAAATGAAGTCTTGAATAGCCTTTCCTCCATTATTCCTAATATAACCATATCCCCCATGTATTGGGTCAAAACTGTCGTTATCTTTACCTACATGACCATTTAGATCTCCACAAATAAAAATCTGTTGGTCGTCTGGAATACCTTGAACCAAGGTGCCCATATCTTCCAAATATTTAGTTTTTGTTTCCACATCTAGTCCTATTTAGGGAGAATAGGTGGTAATGATATTCATTGTTTGATTTCACATGCAAGACTTAATGAGATAACTCAATCCTCACCACACTTTCCCTCTACAACCTTGTCTTTAACTCTTGGTTTTAGAATAATTGAAGTCCACGCTTTATTTGCGCTTTGTGTTTAAAACCCCCAACTGATCTTAGAGCTTTTTTGCTCTTTTTGCTTTTGATAACACTGCACACCACAACTCTCCTCCTTTATATGGGTTTGAGACCGGCCATTTGAGCAAAAGCTCATACAGGCTCTTCCTCCCAATCACTCCTTTCAGTTTTATGTTTGTCTATCACTGAGGAGAAGTTCGTTGATTACTCAAGAAACCTATTTTCCTTGCGAGATTCTTGGTTGTAGACTTGTAGTCTAGTAAATTTGTCAGCACAATGATATCCTGATATATCAGACAAAACAGCTGCCTAGTTTCTTTATACTTCTTCTCTTTTCCTTTTTTACGAAAAAGCTATTGTTTATTCTTGTTGCTGAGAGTAAGATAATTTATTAATGATCTCAATACTAATAATTACAAAATAGGGTTTCTATGCAGTATCTTTCATGCCCGGTTCTCTTGCTAATCATCCTACTGAACTCAGGCATGAATATCAGATAATGTGACATATCGAAAAATTTTACATTCTGTTTCCTATTTTATGGAGAACCCATTTAGAGTACCAATCTGGTGTGGATTGGTGTTTTCTTGTTTCAAGTCTGTATAAGAGTTTTACTATTATAAGTGATAATTTCCATTTGAAGGACTATCATCTCAAATTTGAACTGTCTATGTGGAAATCTCTGTTTCAGGTTTGACAATCCAATCTATCTAATTGCTAAAAGGAAATCTCAACATTTGATAGAGCTTTGTAGATATCTTCAATTAATATGCAGCCTTTCCAATAGTCAGTTATGAAAATTTAGCTTCAATATACTGCATCCTATCTATTAGTATTCTTACATCACACCTTTTTTCAATTGTCTCATTCTGTTGGCGATTCTAAGATGGACACAGCTTATTTAGTTTCCAGAGTAAAATTCCTTTCATTATGGGCTCAAAGTAAACAGATAGTTTTTAGCAACTTTAGGATGACTGTACATGTGATTCTTGTTCTTCTATATCTATGTAGATCATCAAATGAGAAATAATGAAATTCACTTTCACAATGTTGAACCTGAACAAAATTTTCTTTATTTTAGAGTTGTGTATCACATAAATTTCTCATAGGATTCCTATGGGTCATGATCATACCATTGCTAGCCATCCTTGTCTATATCCTTGTCCAGTGTCATTAGTTCCAATGAAAATATCCTTCAAAAGGTTGGCCATTAAAGTGAGTTGCTAATAGCACTCCCCTGCATCCCCAAGAAACAAGAAAATGAAAAAGAAAGTTTCTTTATTAAAACTGGTTGTTTCAGATAGCATTTTCTAAACAAAGAACAATGCTGTTTGAACTGGTATCATTCATTTCTTTCTTGTATATCTACTTAACTGTACGTACAGGTTAAAAAGTGAATGTTGCAGCTCTCCGAGATCTAAGGCATGCAGAGAGAAATTGCGGAGGGACAGACTGAATGAGAGGCATGATCTCTCCTTCTAGATCTCTTTCTTTTGACAAATTCACTTTCTTATGAATTCTCACATCCAAATCTGACATCATATAGGTTCCTCGCATTGAGCTCTGTCCTTGATCCTGGAAGGCCACCAAAAACTGAGAAAGTTGCAATTCTAAGTGATGCTCAAAGGATGCTGATTGAGCTGCGAACTGAAACCCAGAAGCTGAAGGAGTCAAATGAGGAGCTGCAAGAGAAGATAAAAGAACTTAAGGTGTAGTTTTAATTCTAGTGCCACTGAATGTCAGCTGTACTCTCTGATCTTCCATCTGTGCTAGTTTTCTTTGGCTCTCTGTTGAGGCACTTATAAAAGAAAAACCTATGTCTATTCAGGCAGAGAAGAATGAGCTCCGAGATGAAAAGCAAAGGCTAAAGGAAGAAAAGGATAATTTGGAGCAGCAGGTTAAAAGCTTAGCTTCTAAAGCAGGATTTCTCTCCCATCCTTCTGCCATGGGAGCTGCATTTACTGCACAAGGACAAGTTGCTGCAGGCAACAAATTGATGCCTTTCATTGGTTATCCCAGTGTTGCGATGTGGCAATTCATGCAACCTGCTGTTGTTGACACATCTCAAGATCATGTGCTCCGTCCTCCAGTTGCTTAAGCTGGATTTGCCAGGTGACTTGCTACTGGAGCTTTGCTCTTTTTGTTGCTCCTGTGAGTGCTAAAAGTGACAAACAACTGAGACAATTTGCTGGTTGTATTTGTATGTCTAGCTTTTATGTATGTGTCAGTCTTGATGGTTTGCTTAATCATGTATATGGCGGGTGTATACTCACCCGAAAAACAATTATGTATTATGATTCCCTAGATGGGATTCCTTCTGAAATAATTAAACTTGGTTGTATGCACATTATACC</genome_strand>
        <mrna_strand>TGGTTTTGTAGTGTGCAGAGCAAAAGGGAAGGGGGAAATTTGAAGAAGGGAATTAGGTCATGGAGGTCGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATGACGGATATTACTTCTGCTGCATCTGTTACCGTCGCTGAGTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACGATCTATGCTTCTTCTAATCTCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGAAACAGATTACACATTTGCGGATTCAGAAGTTAGCAAGGAGGCAAGCTCACGAAAGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAAAAGTGAATGTTGCAGCTCTCCGAGATCTAAGGCATGCAGAGAGAAATTGCGGAGGGACAGACTGAATGAGAG...................................................................................GTTCCTCGCATTGAGCTCTGTCCTTGATCCTGGAAGGCCACCAAAAACTGAGAAAGTTGCAATTCTAAGTGATGCTCAAAGGATGCTGATTGAGCTGCGAACTGAAACCCAGAAGCTGAAGGAGTCAAATGAGGAGCTGCAAGAGAAGATAAAAGAACTTAAG.......................................................................................................................GCAGAGAAGAATGAGCTCCGAGATGAAAAGCAAAGGCTAAAGGAAGAAAAGGATAATTTGGAGCAGCAGGTTAAAAGCTTAGCTTCTAAAGCAGGATTTCTCTCCCATCCTTCTGCCATGGGAGCTGCATTTACTGCACAAGGACAAGTTGCTGCAGGCAACAAATTGATGCCTTTCATTGGTTATCCCAGTGTTGCGATGTGGCAATTCATGCAACCTGCTGTTGTTGACACATCTCAAGATCATGTGCTCCGTCCTCCAGTTGCTTAAGCTGGATTTGCCAGGTGACTTGCTACTGGAGCTTTGTTCTTTTTGTTGCTCCTGTGAGTGCTAAAAGTGACAAACAACTGAGACAATTTGCTGGTTGTATTTGTATGTCTAGCTTTTATGTATGTGTCAGTCTTGATGGTTTGCTTAATCATGTATATGGCGGGTGTATACTCACCCGAAAAACAATTATGTATTATGATTCCCTAGATGGGATTCCTTCTGAAATAATTAAACTTGGTTGTATGCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-GUJ3m/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U336882" ref_strand="+" ref_description="SGN-U336882        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: Endonuclease/exonuclease/phosphatase(evalue: 3e-09, score=65.5)">
      <seq>cctcgtgcctttaaatttgaagaagggaattaggtcatgggggtcgattctagtgggaatcctaattggttatttgattatgagttgatgacggatattacttctgctgcatctgttaccgtcgctgagtttcagtctccggctactattgatttcagctggcctgctcaaacgatctatgcttcttctaatctcattactgaaacagattacacatttgcggattcagaagttagcaaggaggcaagctcacgaaagcggtaaataaattatccatttcttttatatcatggtttgataggtttgatgaactctttttattacattcttcttgttttagagatctggatctgtttatatatcctatgttctagtaaggagaaaacctatttggctatggttgtccactcttaaatgtactcatttaagaatttttctttcaaaatatgtgtatcctacaactatgtcacaggctaaaatgaagtcttgaatagcctttcctccattattcctaatataaccatatcccccatgtattgggtcaaaactgtcgttatctttacctacatgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-GUJ3m/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="-" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="48364" stop="46155"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48076" g_stop="47880" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="197" r_length="197" r_score="0.939"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47879" i_stop="46830" i_length="1050">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46829" g_stop="46455" g_length="375"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="572" r_length="375" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="-" ref_id="SGN-U336882" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>572</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U336882" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48076" e_stop="47880"/>
          <exon e_start="46829" e_stop="46455"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGGAAGGGGGAAATTTGAAGAAGGGAATTAGGTCATGGAGGTCGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATGACGGATATTACTTCTGCTGCATCTGTTACCGTCGCTGAGTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACGATCTATGCTTCTTCTAATCTCATGTGAGTCTGCTCTTCCGCCCTTTTTTAATTCTTGTCAATTTGTTGTACAATTACTCTCATGGTCATTTTTTTTCTTTTCGAATGAGGCTTATATGGTTTGAACACGTGAAAAGGAGAGACAGTGACTTGAGTTGAAGGAGAAGTAAAGGGAGGCTGAAGAAATATTTGGAGAGGTGATTACACAAGACTTGATGCATCTTTAGATTACGAGGGGATGACCTTAGATAGGGATATGGAGGTCATGGATAGTGGTAGATGGGTTATTGGTAGTTGAGTGTTGTCTTACTTACGGAGGGATAGACTTGGTGGTAGTTTGGAGCATAGTATGTGCTTCTCCTTTCATAGCACTAGTATTAGTATTGCTTTGAATTGCTTTCCTTTCCTTTATTTGAACTGAGGATCTAGTGGAAACAATCTCTCTACCTCCACAAAGGTAGGGTAAGGTCTGCCTACACACTACTCTCTACATACTCCACTTGTGGGATTGCACTGAGATTGTTGTTGTTGTTGAATTTTAAAGAACAATAAAGAAAGTTTTATGTTAGGATTACAACTTCTCTTTTGACTTAAAACATGTGAGCTTTGTATATTAAATTCATTGAAATCGAGATGAAGGGGAAGGCGGAAGGTTGTGGTAAATTTGACACCTAGTTTCAAATAATCTTATCATAGAGTAGGAGGTAGCTTCAACAAGGAATTGTCACTTCAGCCAGTCTGTAGTTTGAAAAGTTGTTCCTTTCGAGCATAAGGAAAAAGTGCCTATCACTTTGTGTTGAGGTTATAGATTCCTCTCTAGATTACATTACTTTAAGATATAGAAAGACTGAAATTATGTTCGGTAAATATGTTTAGTAGGATTTATATCTATCAGCTTTTCCACCAAGGTTATTGTTAGTAATAACTATGAAAGACAAATGTCTAATCTTATGGGTGCGTACATGTTTAATGTCTCGAAAGGATGATGCAAAGTAGTGGGACATCAACACTTTACTGAAGCTGGTGCTTTGCTTTTACCATATCCATATTCTGATGGTCATCTATCTCTTTCAGTACTGAAACAGATTACACATTTGCGGATTCAGAAGTTAGCAAGGAGGCAAGCTCACGAAAGCGGTAAATAAATTATCCATTTCTTTTATATCATGGTTTGATAGGTTTGATGAACTCTTTTTATTACATTCTTCTTGTTTTAGAGATCTGGATCTGTTTATATATCCTATGTTCTAGTAAGGAGAAAACCTATTTGGCTATGGTTGTCCACTCTTAAATGTACTCATTTAAGAATTTTTCTTTCAAAATATGTGTATCCTACAACTATGTCACAGGCTAAAATGAAGTCTTGAATAGCCTTTCCTCCATTATTCCTAATATAACCATATCCCCCATGTATTGGGTCAAAACTGTCGTTATCTTTACCTACATGAC</genome_strand>
        <mrna_strand>CCTCGTGCCTTTAAATTTGAAGAAGGGAATTAGGTCATGGGGGTCGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATGACGGATATTACTTCTGCTGCATCTGTTACCGTCGCTGAGTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACGATCTATGCTTCTTCTAATCTCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGAAACAGATTACACATTTGCGGATTCAGAAGTTAGCAAGGAGGCAAGCTCACGAAAGCGGTAAATAAATTATCCATTTCTTTTATATCATGGTTTGATAGGTTTGATGAACTCTTTTTATTACATTCTTCTTGTTTTAGAGATCTGGATCTGTTTATATATCCTATGTTCTAGTAAGGAGAAAACCTATTTGGCTATGGTTGTCCACTCTTAAATGTACTCATTTAAGAATTTTTCTTTCAAAATATGTGTATCCTACAACTATGTCACAGGCTAAAATGAAGTCTTGAATAGCCTTTCCTCCATTATTCCTAATATAACCATATCCCCCATGTATTGGGTCAAAACTGTCGTTATCTTTACCTACATGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-GUJ3m/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U322975" ref_strand="+" ref_description="SGN-U322975        Tomato 200607 #1 [3 ESTs aligned]">
      <seq>tttttcaaaatcaaattttgggatccacacatataaaaatattgcagtccacaaaaaagtgttccataaggattatttgattctttgtgatgaatgtcttttaccttagatattttaaacattttttcttttgcaatgttgaaattaatattgttgtaaattttttaaagcccagaaacaggaaatttgttgatattttagatgaatatcagtacgtctagcattggaacttcaaatttaggtgttttacctgaggtaatgggatttccacaccaaaaattgttgattaagaaatttcatttggcaagaaagcaacttctccggcaaaatattacattttcttgtaatcgaaagactggaattactcgagccattgcaccagaagcaacaaaggtaataaattttcctctgttcttttaatttggagtcttttgtgtgcctgttttgttgagaggtgattagacagcacacagcataactgtgtgaggatatgacctagataggagtttttggatgttgaggattaggtaaaaagattagtagctagtcgagcatcgtctagtttaccttctatgttttgttattattgatttcttaatattttcactcttcgattgtagtattacatgttgttttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-GUJ3m/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="70899" stop="72134"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71199" g_stop="71834" g_length="636"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="637" r_length="637" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-U322975" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>636</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U322975" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71199" e_stop="71834"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTCAAAATCAAATTTTGGGATCCACACATATAAAAATATTGCAGTCCACAAAAAAGTGTTCCATAAGGATTATTTGATTCTTTGTGATGAATGTCTTTTACCTTAGATATTTTAAACATTTTTTCTTTTGCAATGTTGAAATTAATATTGTTGTAAATTTTTTAAAGCCCAGAAACAGGAAATTTGTTGATATTTTAGATGAATATCAGTACGTCTAGCATTGGAACTTCAAATTTAGGTGTTTTACCTGAGGTAATGGGATTTCCACACCAAAAATTGTTGATTAAGAAATTTCATTTGGCAAGAAAACAACTTCTCCGGCAAAATATTACATTTTCTTGTAATCGAAAGACTGGAATTACTCGAGCCATTGCACCAGAAGCAACAAAGGTAATAAATTTTCCTCTGTTCTTTTAATTTGGAGTCTTTTGTGTGCCTGTTTTGTTGAGAGGTGATTAGACAGCACACAGCATAACTGTGTGAGGATATGACCTAGATAGGAGTTTTTGGATGTTGAGGATTAGGTAAAAAGATTAGTAGCTAGTCGAGCATCGTCTAGTTTACCTTCTATGTTTTGTTATTATTGATTTCTTAATA-TTTCACTCTTCGATTGTAGTATTACATGTTGTTTTC</genome_strand>
        <mrna_strand>TTTTTCAAAATCAAATTTTGGGATCCACACATATAAAAATATTGCAGTCCACAAAAAAGTGTTCCATAAGGATTATTTGATTCTTTGTGATGAATGTCTTTTACCTTAGATATTTTAAACATTTTTTCTTTTGCAATGTTGAAATTAATATTGTTGTAAATTTTTTAAAGCCCAGAAACAGGAAATTTGTTGATATTTTAGATGAATATCAGTACGTCTAGCATTGGAACTTCAAATTTAGGTGTTTTACCTGAGGTAATGGGATTTCCACACCAAAAATTGTTGATTAAGAAATTTCATTTGGCAAGAAAGCAACTTCTCCGGCAAAATATTACATTTTCTTGTAATCGAAAGACTGGAATTACTCGAGCCATTGCACCAGAAGCAACAAAGGTAATAAATTTTCCTCTGTTCTTTTAATTTGGAGTCTTTTGTGTGCCTGTTTTGTTGAGAGGTGATTAGACAGCACACAGCATAACTGTGTGAGGATATGACCTAGATAGGAGTTTTTGGATGTTGAGGATTAGGTAAAAAGATTAGTAGCTAGTCGAGCATCGTCTAGTTTACCTTCTATGTTTTGTTATTATTGATTTCTTAATATTTTCACTCTTCGATTGTAGTATTACATGTTGTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-GUJ3m/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U322976" ref_strand="+" ref_description="SGN-U322976        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: AT2G32290.1 | Symbol: None | beta-amylase, putative / 1,4-alpha-D-glucan maltohydrolase, putative, similar to beta-amylase GI:13560977 from (Castanea crenata) | chr2:13721624-13724006 REVERSE | Aliases: T32F6.19, T32F6_19 (evalue: 5e-174, score=607) genbank/nr: gi|62122633|dbj|BAD93290.1| beta-amylase [Glycine max] (evalue: 0, score=644)">
      <seq>agcagtgtccctttagccaactatgtgcctgtttatgtaatgcttccattagatgttatttcaattgacaatgtttttcgggaccaagttaagtgtgagaagcagttcaaggaactgagagaagccggtgttgatgggatcatggtggatgtctggtggggaattgtagaggccaatggccccgggctatatgattggtctgcgtataggagtttgttccaacttgttcaaaagattggcctcaaaatacaagctattatgttattccaccaatgtggtggcaatataggagatgatgttttcattcctatacccaaatgggtactagctatcggagaaaacaaccctgatattttctatactaatcggactggtacaaggaacaaagaatgcctctcacttgccgtggataaccaacctctatttgaaggtcgaactgctatccagatttacagcgactacatgaggagctttagagagaacatgtccgacttcttggaagctggaagcatagtagacatagaggtaggacttggtcctgccggtgagcttagatatccatcgtacactcagtctcaaggatggaaattccccggcattggagaatttcagtgctatgacaagtacatgagaacagatttcaagggggcagcaacaaaggcaggccactcagagtgggatcttccagatgatgcaggaacatataataatgtacccgccgaaacaggattctttggaccaaatggtacataccttaccgagaaagggaagttctttttgacctggtactctagcaagctactgcttcacggagatcagatccttgatgaagcaaacaaagctttcctgggatgcaaagtgaagctatcagctaaagtagctggaattcactggtggtacaaagatgccagccatgctgcagagctaacagcgggattttataatttggacaatcgagatggctatagaccaatagcaaggatgttatcgagacactatggtacctttaatttcacttgccttgagatgaggaattcagaacatccagcttatgctaagtctggccctcaagagctagttcaacaggttttgagtgttggctgggaagagaacattgatgtagcaggtgagaatgcgcttgcaagatatgacggctatgcctacaaccaaatccttctcaacgctagaccaaatggtatncacaaaacggtccaccaaaactaaaaatggctgggctgact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-GUJ3m/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="72214" stop="75071"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72515" g_stop="72562" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="48" r_length="48" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72563" i_stop="72657" i_length="95">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72658" g_stop="73057" g_length="400"/>
          <reference_exon_boundary r_type="cDNA" r_start="49" r_stop="447" r_length="399" r_score="0.985"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73058" i_stop="73156" i_length="99">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.827" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73157" g_stop="73321" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="448" r_stop="612" r_length="165" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="73322" i_stop="73608" i_length="287">
            <donor d_prob="0.932" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="73609" g_stop="73872" g_length="264"/>
          <reference_exon_boundary r_type="cDNA" r_start="613" r_stop="876" r_length="264" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="73873" i_stop="73983" i_length="111">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.835" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="73984" g_stop="74193" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="877" r_stop="1086" r_length="210" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="74194" i_stop="74615" i_length="422">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="74616" g_stop="74771" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="1087" r_stop="1241" r_length="155" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-U322976" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>1243</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U322976" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72515" e_stop="72562"/>
          <exon e_start="72658" e_stop="73057"/>
          <exon e_start="73157" e_stop="73321"/>
          <exon e_start="73609" e_stop="73872"/>
          <exon e_start="73984" e_stop="74193"/>
          <exon e_start="74616" e_stop="74771"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCACTGTCCCTTTAGCCAACTATGTGCCTGTTTATGTAATGCTTCCAGTAAGTCATAAACCTGTCGTCGATCATGAAACTGCATTGATGCAGATGCTAGTTTTAACACTTCCCGTTTCTTCTTTTCTGCTGGTGACAAACAGTTAGATGTTATTTCAATTGACAATGTATTTCGGGACCAAGTTAAGTGTGAGAAGCAGTTCAAGGAACTGAGAGAAGCGGGTGTTGATGGGATCATGGTGGATGTCTGGTGGGGAATAGTAGAGGCCAATGGCCCCGGGCTATATGATTGGTCTGCGTATAGGAGTTTGTTCCAACTTGTTCAAAAGATTGGCCTCAAAATACAAGCTATTATGTCATTCCACCAATGTGGTGGCAATATAGGAGATGATGTTTTCATTCCTATACCCAAATGGGTACTAGCTATCGGAGAAAACAACCCTGATATTTTCTATACTAATCGGACTGGTACAAGGAACAAAGAATGCCTCTCACTTGCCGTGGATAACCAACCTCTATTTGAAGGGTCGAACTGCTATTCAGCTAACTCTCAGAAGGATCAATCCCAATTTTATGCTCAGATACGGATAGACGTATTGTATTATGAGCTTAGGCTCTAACTAAAATTCCTGATGCATTTAGATTTACAGCGACTACATGAGGAGCTTTAGAGAGAACATGTCCGACTTCTTGGAAGCTGGAAGCATAGTAGACATAGAGGTAGGACTTGGTCCTGCCGGTGAGCTTAGATATCCATCGTACACTCAGTCTCAAGGATGGAAATTCCCCGGCATTGGAGAATTTCAGGTGAGACTTGGCTCAAGCTGTTACTTAAAGATCAACCACTTTGTGACTCGAGATTCTTAACTTCTTATTCATTTTGATACTTCCGAGTGTATTTGTCTAAGCTTATAAACTGGTCAGACTGGCTTATAAGCATTATTTTTATGCGTTTGGCAAATACTCGAAAGTGCTTATAAGTTGGTCACCCCCAACTTATGTTTTGTCAGATTATAAACACTTTTAGTTTGATCAAAATATTTATTGTTTTATCCTTACAATCCACTGATCAAAATGGGCTCTAAATGTTGCAGTGCTATGACAAGTACATGAGAACAGATTTCAAGGGGGCAGCAACAAAGGCAGGCCACTCAGAGTGGGATCTTCCAGATGATGCAGGAACATATAATAATGTACCCGCCGAAACAGGATTCTTTGGACCAAATGGTACATACCTTACCGAGAAAGGGAAGTTCTTTTTGACCTGGTACTCTAGCAAGCTACTGCTTCACGGAGATCAGATCCTTGATGAAGCAAACAAAGCTTTCCTGGGATGCAAAGTGAAGCTATCAGCTAAAGCAAGTCTTCATCCACCTGGAAATTCTTTAGTCTTGGCATTATTGATCCCATTAGAGTTTTGACAGCACAAGCTAACAGAATTGTCCCTTCTGTCAATTTTGCTCGAGCAGGTAGCTGGAATTCACTGGTGGTACAAAGATGCCAGCCATGCTGCAGAGCTAACAGCGGGATTTTATAATTTGGACAATCGAGATGGCTATAGACCAATAGCAAGGATGTTATCGAGACACTATGGTACCTTTAATTTCACTTGCCTTGAGATGAGGAATTCAGAACATCCAGCTTATGCTAAGTCTGGCCCTCAAGAGCTAGTTCAACAGGTTAGAAAAGAGAGTTGCATGTTTTATACCATTTTAGCATCCAGTCTAGATCTTGGACAAACTGTGACTTTAACCTTATACTCCCTCCGTCCCAATTTAAGTGTCCTAGTTTAACTGTGCACTAAGTTTATGAAAGGGGAGACACTGACTCTTTTGGTCTTAAATTAAAGATGCATGTGTGTATCCCTTTGATTTTTGGTCTTAGACCTGCCATGTAGAATGTTGGAACTGGAAAGGTTACTAAATATAGAAAGAGACGCTTTTTTTGGGACAGATCAAAAGGAAAATAAGACAACTTAAACTTGGGACGGAGGGAGTACCAGTTCTGAGAGACCTAATTTTACAGAGGAAAGACTAACATTTTTTCGTGAACAACTAGCTAAGGACTGCTATTCACCAAGACTTTACCTGATTATGTACAGGTTTTGAGTGTTGGCTGGAAAGAGAACATTGATGTAGCAGGTGAGAATGCGCTTGCAAGATATGACGGCTATGCCTACAACCAAATCCTTCTCAACGCTAGACCAAATGGTATCAACAAAAACGGTCCACCAAAACTAAAAATGGCTGGGCTGACT</genome_strand>
        <mrna_strand>AGCAGTGTCCCTTTAGCCAACTATGTGCCTGTTTATGTAATGCTTCCA...............................................................................................TTAGATGTTATTTCAATTGACAATGTTTTTCGGGACCAAGTTAAGTGTGAGAAGCAGTTCAAGGAACTGAGAGAAGCCGGTGTTGATGGGATCATGGTGGATGTCTGGTGGGGAATTGTAGAGGCCAATGGCCCCGGGCTATATGATTGGTCTGCGTATAGGAGTTTGTTCCAACTTGTTCAAAAGATTGGCCTCAAAATACAAGCTATTATGTTATTCCACCAATGTGGTGGCAATATAGGAGATGATGTTTTCATTCCTATACCCAAATGGGTACTAGCTATCGGAGAAAACAACCCTGATATTTTCTATACTAATCGGACTGGTACAAGGAACAAAGAATGCCTCTCACTTGCCGTGGATAACCAACCTCTATTTGAA-GGTCGAACTGCTATCCAG...................................................................................................ATTTACAGCGACTACATGAGGAGCTTTAGAGAGAACATGTCCGACTTCTTGGAAGCTGGAAGCATAGTAGACATAGAGGTAGGACTTGGTCCTGCCGGTGAGCTTAGATATCCATCGTACACTCAGTCTCAAGGATGGAAATTCCCCGGCATTGGAGAATTTCAG...............................................................................................................................................................................................................................................................................................TGCTATGACAAGTACATGAGAACAGATTTCAAGGGGGCAGCAACAAAGGCAGGCCACTCAGAGTGGGATCTTCCAGATGATGCAGGAACATATAATAATGTACCCGCCGAAACAGGATTCTTTGGACCAAATGGTACATACCTTACCGAGAAAGGGAAGTTCTTTTTGACCTGGTACTCTAGCAAGCTACTGCTTCACGGAGATCAGATCCTTGATGAAGCAAACAAAGCTTTCCTGGGATGCAAAGTGAAGCTATCAGCTAAA...............................................................................................................GTAGCTGGAATTCACTGGTGGTACAAAGATGCCAGCCATGCTGCAGAGCTAACAGCGGGATTTTATAATTTGGACAATCGAGATGGCTATAGACCAATAGCAAGGATGTTATCGAGACACTATGGTACCTTTAATTTCACTTGCCTTGAGATGAGGAATTCAGAACATCCAGCTTATGCTAAGTCTGGCCCTCAAGAGCTAGTTCAACAG......................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGAGTGTTGGCTGGGAAGAGAACATTGATGTAGCAGGTGAGAATGCGCTTGCAAGATATGACGGCTATGCCTACAACCAAATCCTTCTCAACGCTAGACCAAATGGTATNCAC-AAAACGGTCCACCAAAACTAAAAATGGCTGGGCTGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-GUJ3m/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U321983" ref_strand="+" ref_description="SGN-U321983        Tomato 200607 #1 [8 ESTs aligned] arabidopsis/peptide: | Symbol: None | MADS-box family protein, MADS-box protein AGL66 | chr1:29320106-29321961 REVERSE | Aliases: F28K19.20, F28K19_20(evalue: 3e-18, score=89.4) genbank/nr: gi|51536054|dbj|BAD38180.1| putative MADS-box protein [Oryza sativa (japonica cultivar-group)] (evalue: 1e-17, score=94)">
      <seq>aattcattttgcttcactctaatacactaaactagaagcttctctctaaaactcacatgcagtggatcggaaaaagttccactgctgttttcatctccaaagctaaggcgaaaatattagaatttttcatctaaaagctcccaagctaacttcatgcttctctccaagcgatttttttcgaagtagagtactacggatccaaaagatttcatttcaatctaccaaaatcaagttctagtttgcatcttctcatgggtcgcaataagattgtgatgaagaaaattgaggattcaacatcccgtaaacagttctattcaaatcgcaaggatagcattgtgaagaagtcaaatgagctggcggttgtatgtggtacagatgtggggttgttgatgttttctccatctggtcagctgactacctattctagcaaagaaagtattgaggacatcatgatcgaagctatgaacaagtctgtgaatccgcgacccataccaaatctaaatgaacagcttttgatgcagagtctcaaacagtcaaaatctgaaggccaaatggttggaaaaatagctattgctgaggctcatgagaagaagcttaatgagctcaaagaaacactaagggaggcacaacagaaaataaggtattgcaatccgcaagtggagaatatcagctcagtccaagaagctgaagcatatgagcagttccttaggagtaatatggaacagattcaacaatcaaaagcaaaactcttaggtgtccaaggattagtccatagaaatgaatatcctgcggtcaacacagaggatacggctgctgcaggaaccagtagtggatggatgttttgaggaatcaggccggatcgcggtggagaagtagctgcgggtgtccaacagctgcagcagaaatataattatgttatattaagaacttagtagaataaataacttgcaccaatcaagcatgcaaaagtatgaataatgttgcatctgactattgtgaatttcacttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-GUJ3m/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="83814" stop="90673"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84114" g_stop="84345" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="232" r_length="232" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="84346" i_stop="88007" i_length="3662">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.728" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88008" g_stop="88211" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="233" r_stop="436" r_length="204" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88212" i_stop="88304" i_length="93">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="88305" g_stop="88352" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="484" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="88353" i_stop="88462" i_length="110">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="88463" g_stop="88487" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="485" r_stop="509" r_length="25" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="88488" i_stop="88584" i_length="97">
            <donor d_prob="0.996" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="88585" g_stop="88646" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="510" r_stop="571" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="88647" i_stop="88833" i_length="187">
            <donor d_prob="0.698" d_score="1.00"/>
            <acceptor a_prob="0.795" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="88834" g_stop="88840" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="572" r_stop="578" r_length="7" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="88841" i_stop="88967" i_length="127">
            <donor d_prob="0.989" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="88968" g_stop="89029" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="579" r_stop="640" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="89030" i_stop="89120" i_length="91">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="89121" g_stop="89220" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="641" r_stop="740" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="89221" i_stop="89341" i_length="121">
            <donor d_prob="0.942" d_score="1.00"/>
            <acceptor a_prob="0.753" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="89342" g_stop="89392" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="741" r_stop="791" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="89393" i_stop="89488" i_length="96">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="89489" g_stop="89516" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="792" r_stop="819" r_length="28" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="89517" i_stop="90183" i_length="667">
            <donor d_prob="0.989" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="90184" g_stop="90373" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="820" r_stop="1009" r_length="190" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-U321983" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1009</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U321983" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84114" e_stop="84345"/>
          <exon e_start="88008" e_stop="88211"/>
          <exon e_start="88305" e_stop="88352"/>
          <exon e_start="88463" e_stop="88487"/>
          <exon e_start="88585" e_stop="88646"/>
          <exon e_start="88834" e_stop="88840"/>
          <exon e_start="88968" e_stop="89029"/>
          <exon e_start="89121" e_stop="89220"/>
          <exon e_start="89342" e_stop="89392"/>
          <exon e_start="89489" e_stop="89516"/>
          <exon e_start="90184" e_stop="90373"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTCATTTTGCTTCACTCTAATACACTAAACTAGAAGCTTCTCTCTAAAACTCACATGCAGTGGATCGGAAAAAGTTCCACTGCTGTTTTCATCTCCAAAGCTAAGGCGAAAATATTAGAATTTTTCATCTAAAAGCTCCCAAGCTAACTTCATGCTTCTCTCCAAGCGATTTTTTTCGAAGTAGAGTACTACGGATCCAAAAGATTTCATTTCAATCTACCAAAATCAAGGTTAATCTACCAGATCTTTGCTTAGATAACTTGTTCAATGATTATTGTGGTTTTAAGTTTAGCTCATTTTTTCTTTTTTGAAGAGGATGAGTGTATGTCCTTATTATGTTTCTTCTCTATGGCTTGTTGAAGTTAAATTTTCTACAAGTGATGTTTGTTCTAAAATCGAGGCTAATCTTCAAATTTCAAGCTCTATGAGTTTAATCTGCAAATTTCAAGCTCTGTGTTTAGGTTAATTGGGTAAAACATTTTTTGCAAATCAAATCTCTGCTTAGATAACTTGGTCGATGATCATTGCGGTTTTAAGTTTAGTTCATTTTTTCTTTTTTCATTAGTTATATTTCTTCTCAGGTGCTTTTCATGTTGTTAGCCTTTTTGTTTATGATGGTTGTGTTTGGATCAACTTTGCACACCCACACCCATATATATATATATATATATATATATATATATATATATATATATTTAGCGATTGGTGGGTAAACCTGGCACCAATGCTGGAGAAGATGAGTGTATGTCCTTATTATGTTTCTTCTCTCTAGCTTGTTGAAGTTAAATTTTCTGCAAGTGATGTTTGTTCTAACTTCTAAAATTCCTTCCTTGTACATCCGTCTATGATGGATGCAAATATAGAAACTTGACAACAAATAGACAAGGGAATCGATGCATTACACCTATGTTTACTAGGTTTTGGCATTGAGTTTGTGTGAATAATGAGAAATGATTGGAGCTCTTTGAAATTTTGAGAAGTACCGGGAAGAATCAAACAAGAAAAAAGAAACTTCGTTGGGAAGAAAATATTGAATGTTGTAGTATTAGGGGCAAATTTAATGTGTGGAGTAAGACAAATGCGGGAAAGAGAAAATCAAAGCATAGAAGAATTTTGCTGATGATAACAGAAAGTGATGGGAGCTCTTTGAAGCTTTGGGAAGTATCCAGGGAAATTTAGTTTGTCGAGTAAGAAGAATGCGGAAAAGAGAGAGAAAGAACAAACAAGAAACTTGCCGATGATAAAGGAAAGTAATAGGAGCTCTTTAAGCCTTGGGAAGTATACAGGACAATTTAACACATGGATTAATACAAATATGGATAGGATAGTGAAAGAGTTCCGATATCGTTTTTAATCTCGAAAGAACACACATCATACGTATAAACTTTCCTTGAATTGAGAATGTTTTCAGGTAGATTAGCTGTTAAACTATAACCAAGAAATGGAATTGCCCTGTCGAAGCATTTATTGCCATATGGGAAAGGGTCAATGGAAAGGGAAGACTTGGCGCCAAGCACTAGCTTGACAACATTCCACAAATACTCGAGAAGATGGTGGCATTGATGGCCAACAATGGACCTAGTGCCATGCCACACAATGACAAGTGTGCTACGGTGGGAAGACAAATTTGAGTTATTCCAATGCAAATGATCATTGCTTTTCACAAGGGGCTTACATAACTTTATTTGAACAAAGATCCAAATATTTTTTTGAGGTGCTCACCGCTTAAGGTAGTTGAGTGTGAGTTTTTGAAAGTTGACCTTTTCTGGCTTATATGATTTCACCTTACATTCACTATCCGAAAGTTCAGTAATTCAACTTATGGACTCTATGAACCTCTGTGCTTGTCATTTTCATAAACGGTCAATTAAAAGGGACGTCTTTCAAAATTCCTTCTGGTATATAACCAATTATTTGCTTGCACCAAATGCATGTGTTTATATGTTGCGGAAGGTGAAGCTTCAGATAAGTATACTTGGTCATGTCATTTAGTAGTAGTTATTGAAGTATTCTGTCTTGTTCAATGTTGTTCTCCTTTGTAATCTAGATTATTCTTTGCTTGTACATCCATATCTATGTGATTTTTAGATACTAAAGAACAAATCAGGTATGTATGTAGGTAGGTAGGTAGGTATATTTCTATGTATATATGTATGTAGGTAGGTGGTTAGGTAACCTATATTTGACAAGTATCAATTCGATATTTAAAATCTTAGCAAGAATCTAGAGTAATTATAAATTTGTAATGCGTGGAGTAAAAGGAATGCCAAAAAGAGAGACAATTTGCAATAATAATAATAATAATGTAACACAAAAGGCAATGTTTGCGACAAATATAACTTCCATAGAAGTTGTGGACGTGTTTCAGGTAGATCAAGTGTTTAACTATTGTCAAGCAAGTGGAATTACAATATAGAAACATTTGAAAAGAAGAGGAAAAACATCTTCCTGCTGCCAATTGGCTTGATAACGATGCACAAATGCATGTCTGAGAAAATGCTAGTTTTGACGGTAACCTGCTATATGATATAGTGGGAAGACAAGTTTGTGTTACTTCAATTCTAAAGACAATTGCTTTAAGAAGGGAGTTAGCGTAGAATTATTTGGGCAATGATGATAGAAGTTTGCGTCTTGAGTAGTGAGTTTGTGAAGGTCGAGGTTTGCTGGCTTTTATGACTGTCTTAGTCCACATTAATTAATCTAAAGCTTGCCCGTTTCGCTCATAAGTTCACCATTCAGTATGAGCTGATATTTGATTATATGGTATAATCAGGATCAAAGGGGGCCATGCTAAAGTCTTGAGCTATAATTTGAATAGGTATATGAAGAACTCAATGTGTGAATTGCCTCATCTCGGGGTTTGGTATAGTGGTCGGAGCACATCATGTTATGAATTGAGTGCACGATTCGAGTTTGAATCCTACCACAAAAAAGTCCTGTATTCAAAAGAGAAGGGATCCTAGGAGTCTCTAACTATGTGTCATTGAACCTCGCAGATTTCTCAGTTATTAAAAAAAAAACGAACAGAATATATGGACATCAATTTTTCATTGAAGCTGTGAACATATATTTTATTGTTAGGTCAAGGGTAAAGCTGATAGACGAGAGTGGAGGAAGTCACTCAGCCAAATGATATGACCTGTTTTTTTCTTATACTATTTTATAGGTATAGCATTATTAAGTATCATGTTTCATCATTAGTTGGGCGGATGTACGCCATAAGTTATGGGTTCGGCAGTATCCAGTAGCTTTGTTTCAAACTCTATATATTTGTGTCAAAACATTCACGTAATAATTAAAATCTCATGGTCCCATTTATTGTCATGTATTAGAATTCAGAACCAATAAACTAAACATCTTTATTTCGACTTTGACCTAGATGTCTTAGTTTCTCTGTGGTCTAAGTTTTACTGATGTATTATCATAGTTCTTTTTAATGTGATCTTCTCATAAACCTTACACTCATCTTGAGATATAAAAATATAAATTCGTCTATACATTGAAATTATATCATATTGCCTTTAAATTTCTAGGTAAGGTGATAAATAGTACTTCTCTAATATCATTATTGGAAAGAAAGAGCTTAGGAGTCATTGTTATTTTCCATTCATAATGTTATAGCCCAAATATTTATGTTCATTAACTGTTATTTTCCATTCTGCAGATTACCGCCCACAGAAAAAATCTAGTATTGACTAAAGATTAGCGCTGAAAGTTGTTTTCTTCACAAAATCTTTCTATCTGATTAAATATTAGATTTTCTAAACTGGTTTGACTTAAGACTAACATGTTAACGCATTAAATTCTTTGACCTATTTTTTTCCTTTTATTTTCTTTGTTGATCTATATATTTCTCAGTTCATTGACGAACAACTTTGCATCTAACTTCCAGTTCTAGTTTGCATCTTCTCATGGGTCGCAATAAGATTGTGATGAAGAAAATTGAGGATTCAACATCCCGTAAACAGTTCTATTCAAATCGCAAGGATAGCATTGTGAAGAAGTCAAATGAGCTGGCGGTTGTATGTGGTACAGATGTGGGGTTGTTGATGTTTTCTCCATCTGGTCAGCTGACTACCTATTCTAGCAAAGAAAGGTTAATGAAATTTCTAGAATGATCTTCTTTGATTGAACATTTTACGTTTCCTTTATGATACAAAATGTGATATGATTTCTTTTGATTGCTTAGTATTGAGGACATCATGATCGAAGCTATGAACAAGTCTGTGAATCCGCGGTATGTTTATAATTTCAATATGCCAAATCCATGAACTAGACTATGCCAATTCCATTTAACTGACTATCTCAAATGCTTTTTTGTCGTCCCAATTGACATGATTGTTGAAGACCCATACCAAATCTAAATGAACAGGTATTAATCAAGTTTTATACATCTTTTACTGATCAACAGCCTCTACCGGCAAGTCCTTGGAGTTCCGTCGGACCTTAACATGAGGTTTATTTTGCAGCTTTTGATGCAGAGTCTCAAACAGTCAAAATCTGAAGGCCAAATGGTTGGAAAAATAGCTATGTATGACACTCTCCTTTGGGACTCTGTTTATGTGTATTAGTCTATTAGTTCGTCCGAGCGGATTCATGACTTCTCTCTTTCTTTACTCTTTTTTTTTTTTTGGTTGGTATTTTCTACATTATTGAATTATTTTTGTCATTTTTTGCTGGGTATATTACGATGCTGATGATTGATCAACGTGCTTTAGTGCTGAGGTAAGATCTGATGCTTCCACGCACATTAGTGTATACATAGGGTGATCTTACACCAGTAGTTATAAGCTTATATTTTTTATTACTGAAACTCGTAAATTGATATATTTTTCATGTATTTCCATATTAGGCTCATGAGAAGAAGCTTAATGAGCTCAAAGAAACACTAAGGGAGGCACAACAGAAAATAAGGTTCTTGTCTTTCTTTTTTTGTCGTGCATCTCTTTTTTGATATTCTATTTCTAAAAAAGGAATAATATTTTTCTTCCTTGGATGGGGGCAGGTATTGCAATCCGCAAGTGGAGAATATCAGCTCAGTCCAAGAAGCTGAAGCATATGAGCAGTTCCTTAGGAGTAATATGGAACAGATTCAACAATCAAAAGTGAGCATATCTCAAGGCTAATGCAATTTTTTACTTCTATTTCAATAATAATAAAAAAATAGTAGCAGTTGGTTAGTTGAATTAGGACCAGCATGATCATGCTTTGTACATTTCTTATCAGGCAAAACTCTTAGGTGTCCAAGGATTAGTCCATAGAAATGAATATCCTGCGGTAAGCCATTTTTTATTGTTTTCATATTTGGAAGGATGTTTAACTGATTTACCGGCATCCAGTATGGAAAGTAACTGTTAGCATTATTATTTATAGGTCAACACAGAGGATACGGCTGCTGCAGGTAAAAAATGTTCATATTTAAATGCTTACTGGTAACTCTTTTGAGTGATCTATATATGTTCTATTTACCTAAAGTTGTCTATCTCTGAATAAGAAGAAAACGACATTACTATATCTTCAGATTGCAAAACATGAAATGATTGAAAGAATGTTCTTCTCTCGCTCCCAAAAGTTAATGAAAGTCCCAAGAGGTCTCCACTCATCATGAGGTTCAATAGTGTTCCGCTCACCCTCCAGCATGACTCAGACCCTCAAAATACCGGTTTAGGAGGTCGTTTGACCATCTAATTTGCAGTGATAAAATTTTAGTACACATATTAGTGGTGTACCGTGTATATAAGTAAAATGAAACATATCTTGGACACCCTTTTAAATAACGAGTTGTGCTATTTCTGGACACCTTTTATAATAATTCACATATCTACACTTAATACTTCAGCAAGTTTTGGTAAACTAGATGTCCAAATGGTATATATATTAGTATATATATACAATAACATCTATACATCAGTCTCAAACAAGTTGATATCGGAATAAGTACTTCATTTAGACTCATTTGATTATACCATCACCGTACTAATAAGTGAACTAAATCTATAGCAACTTTTTATTTTTATTTTCAAACATTTGCGTGTAATCTGCTGAATCTTGCTTGTCTGGATTTGTAGGAACCAGTAGTGGATGGATGTTTTGAGGAATCAGGCCGGATCGCGGTGGAGAAGTAGCTGCGGGTGTCCAACAGCTGCAGCAGAAATATAATTATGTTATATTAAGAACTTAGTAGAATAAATAACTTGCACCAATCAAGCATGCAAAAGTATGAATAATGTTGCATCTGACTATTGTGAATTCAACTTT</genome_strand>
        <mrna_strand>AATTCATTTTGCTTCACTCTAATACACTAAACTAGAAGCTTCTCTCTAAAACTCACATGCAGTGGATCGGAAAAAGTTCCACTGCTGTTTTCATCTCCAAAGCTAAGGCGAAAATATTAGAATTTTTCATCTAAAAGCTCCCAAGCTAACTTCATGCTTCTCTCCAAGCGATTTTTTTCGAAGTAGAGTACTACGGATCCAAAAGATTTCATTTCAATCTACCAAAATCAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGTTTGCATCTTCTCATGGGTCGCAATAAGATTGTGATGAAGAAAATTGAGGATTCAACATCCCGTAAACAGTTCTATTCAAATCGCAAGGATAGCATTGTGAAGAAGTCAAATGAGCTGGCGGTTGTATGTGGTACAGATGTGGGGTTGTTGATGTTTTCTCCATCTGGTCAGCTGACTACCTATTCTAGCAAAGAAAG.............................................................................................TATTGAGGACATCATGATCGAAGCTATGAACAAGTCTGTGAATCCGCG..............................................................................................................ACCCATACCAAATCTAAATGAACAG.................................................................................................CTTTTGATGCAGAGTCTCAAACAGTCAAAATCTGAAGGCCAAATGGTTGGAAAAATAGCTAT...........................................................................................................................................................................................TGCTGAG...............................................................................................................................GCTCATGAGAAGAAGCTTAATGAGCTCAAAGAAACACTAAGGGAGGCACAACAGAAAATAAG...........................................................................................GTATTGCAATCCGCAAGTGGAGAATATCAGCTCAGTCCAAGAAGCTGAAGCATATGAGCAGTTCCTTAGGAGTAATATGGAACAGATTCAACAATCAAAA.........................................................................................................................GCAAAACTCTTAGGTGTCCAAGGATTAGTCCATAGAAATGAATATCCTGCG................................................................................................GTCAACACAGAGGATACGGCTGCTGCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCAGTAGTGGATGGATGTTTTGAGGAATCAGGCCGGATCGCGGTGGAGAAGTAGCTGCGGGTGTCCAACAGCTGCAGCAGAAATATAATTATGTTATATTAAGAACTTAGTAGAATAAATAACTTGCACCAATCAAGCATGCAAAAGTATGAATAATGTTGCATCTGACTATTGTGAATTTCACTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-GUJ3m/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U323092" ref_strand="+" ref_description="SGN-U323092        Tomato 200607 #1 [6 ESTs aligned] arabidopsis/peptide: | Symbol: None | MADS-box family protein, MADS-box protein AGL66 | chr1:29320106-29321961 REVERSE | Aliases: F28K19.20, F28K19_20(evalue: 4e-19, score=92.8) genbank/nr: gi|51536054|dbj|BAD38180.1| putative MADS-box protein [Oryza sativa (japonica cultivar-group)] (evalue: 5e-18, score=95.5)">
      <seq>gccagaggcaaaatttcatgtgaaacctaaatatccatagccctccgatctgaagcctctgatatccttccatgggtctaatgtaatccgaaggcataactcaactagtatgtggatggacagtacattgcctccggtctatttgatgttataattctcctaccattaagttcaattttaagtgtccaagtccacaatatgtagagtgtcctcttccttttatggagttatggtctaatagccaaagaggaaaaagaacatcaagaaggaaaagctctatgtggtattgaggattctcatcaaattaaaatggatactctctcctaatagaaaagttaacgaacaattaatcatgagggaacttcatggcatttgtagcctaacttgaataagtttcttggattggcttgacctaaatagaaggaagctcgagctacattgcaaaagcttttatcagcttgtgatgaagaaaattgaggatccaacatcccgtcaacagttctattcaaagcgcaaggataccatccttaagaagtccaatgagttggctgttttatgtgatgtggatgttggtcttctaatgttttctccagccggcgaagtgactagctattctagcaaagaacgtcttgaggatgtcatgctccttgctatgaacaaggctggtgaactgaacaagctatctcctgaaaatccaaatgaacaggctttgatggactctctcacacaatcaaaacatgaagccgaaatggtggagaagatagcgattgttgaggctcatgaggagaagcttaatggggtcaaagaaagactaagtgaagcacaacagaaaataaggtattacgaaccacaagtggagagtatcaactctgtccaagaagctgatgcatatgagaagttcattttgagtgctctggaactgattcaactatcaaaggcaaaactcttgggtgaccaggaatttctccagagaaatgaaaatgttgcggtgtcttctgtcaacgcagaggctatggctgctgaaggaaccagtgggggatggatgtattgaggaaacaggccggatcacggcggggaagtagctgaggatgtccaacagctatagcaggaataatagttatactagtttataggttaagaacttagtagaataaataacttgcccctatcaggcaagcaaaagtatgaataatgttgcatttgtctattgtgaatgcaactatttgaatatggcatctgaatatggcatcaaaacatagctattgtgttttgaaataaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-GUJ3m/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="91311" stop="105873"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91611" g_stop="91684" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="74" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91685" i_stop="91785" i_length="101">
            <donor d_prob="0.772" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91786" g_stop="91859" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="75" r_stop="148" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91860" i_stop="91979" i_length="120">
            <donor d_prob="0.855" d_score="1.00"/>
            <acceptor a_prob="0.299" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91980" g_stop="92013" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="149" r_stop="182" r_length="34" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="92014" i_stop="92480" i_length="467">
            <donor d_prob="0.962" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="92481" g_stop="92608" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="183" r_stop="310" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="92609" i_stop="92699" i_length="91">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.884" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="92700" g_stop="92846" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="457" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="92847" i_stop="103667" i_length="10821">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="103668" g_stop="103837" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="458" r_stop="627" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="103838" i_stop="103921" i_length="84">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="103922" g_stop="103975" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="628" r_stop="681" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="103976" i_stop="104072" i_length="97">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="104073" g_stop="104097" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="682" r_stop="706" r_length="25" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="104098" i_stop="104173" i_length="76">
            <donor d_prob="0.553" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="104174" g_stop="104235" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="707" r_stop="768" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="104236" i_stop="104430" i_length="195">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.377" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="104431" g_stop="104437" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="769" r_stop="775" r_length="7" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="104438" i_stop="104541" i_length="104">
            <donor d_prob="0.926" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="104542" g_stop="104603" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="776" r_stop="837" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="104604" i_stop="104705" i_length="102">
            <donor d_prob="0.866" d_score="1.00"/>
            <acceptor a_prob="0.855" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="104706" g_stop="104805" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="838" r_stop="937" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="104806" i_stop="104886" i_length="81">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="104887" g_stop="104937" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="938" r_stop="988" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="104938" i_stop="105016" i_length="79">
            <donor d_prob="0.894" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="105017" g_stop="105053" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="989" r_stop="1025" r_length="37" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="105054" i_stop="105313" i_length="260">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="105314" g_stop="105572" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="1026" r_stop="1284" r_length="259" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1285" polyA_stop="1295"/>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-U323092" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1284</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U323092" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91611" e_stop="91684"/>
          <exon e_start="91786" e_stop="91859"/>
          <exon e_start="91980" e_stop="92013"/>
          <exon e_start="92481" e_stop="92608"/>
          <exon e_start="92700" e_stop="92846"/>
          <exon e_start="103668" e_stop="103837"/>
          <exon e_start="103922" e_stop="103975"/>
          <exon e_start="104073" e_stop="104097"/>
          <exon e_start="104174" e_stop="104235"/>
          <exon e_start="104431" e_stop="104437"/>
          <exon e_start="104542" e_stop="104603"/>
          <exon e_start="104706" e_stop="104805"/>
          <exon e_start="104887" e_stop="104937"/>
          <exon e_start="105017" e_stop="105053"/>
          <exon e_start="105314" e_stop="105572"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCAGAGGCAAAATTTCATGTGAAACCTAAATATCCATAGCCCTCCGATCTGAAGCCTCTGATATCCTTCCATGGTAGTCTCTCTATCCCTCAGATCATGTTTCCATCGAAGCTCCTCTTGTTGTTGAGTATAAAAAAATTTAAGGTTTTGATTTCTCTGTCCCTGTTTTTTTAGGGTCTAATGTAATCCGAAGGCATAACTCAACTAGTATGTGGATGGACAGTACATTGCCTCCGGTCTATTTGATGGTCCGTTACTCAAACACTCCGATTGTTTCAATCGGGTTGATTTGATTATCATTTTCATTCAGTTTTTGAAGTTTTTATCAAATGTGACATTGAGTTCTGCTTGGTTGAACGTTTTGGCAGTTATAATTCTCCTACCATTAAGTTCAATTTTAAGGTAATCTTCATTGATTTTTATGCTCTGTTTTGTCCCATTGTTTAGATGGAATTTATAATTCTCCCACTGTTAAGTTCACTTCTAGCTAATTTTTGTTGATTTATGGGAAAAAAGCTCAGGTGTCATGTACTCTTAGCTTTGTAAAAAGTGATATTGTATTTTGAGAGTGTCGGGTTCGTTCGGTTTTCATTTGATTCAGTTCTGAAGATTTAAGTGTTCTGTTATGCTCGGTTTGGTTGTAGTTTTAGCAATTTCACTACTATTAAGTTCAGTTTTAAGATGATATTCCTTGATTTTTCTTCTTTGTTTTTATCTATTGCTGGATGGAACTGCATACTTTTCTGCCTATCATGCTCAATTCTAGCTATTTTTCGTTGATTTATGAGCTCATTTTTTGCTATTTTTGGGTGCTATTTCCCATATGATTTTTGTAGAAAATGATACATTTTGCTTTGATATTTTGCGAGTGTCCAAGTCCACAATATGTAGAGTGTCCTCTTCCTTTTATGGAGTTATGGTCTAATAGCCAAAGAGGAAAAAGAACATCAAGAAGGAAAAGCTCTATGTGGTATTGAGGATTCTCATCAAATTAAAAGTAAGTCATAAATTCAAGTTGTAATAGGAAATGTCTAACTATATAGTTATGGTGAGCCTCTGAGCATTGTGTAACTGATACATTGGTGCAGTGGATACTCTCTCCTAATAGAAAAGTTAACGAACAATTAATCATGAGGGAACTTCATGGCATTTGTAGCCTAACTTGAATAAGTTTCTTGGATTGGCTTGACCTAAATAGAAGGAAGCTCGAGCTACATTGCAAAAGCTTTTATCAGGTATGCCCTTGATTTTCATACATGTACTACCTGTGCTTAGATGGAGGTAGATCGTACGTATTTCAAAACCCTGAGAATAAAACTGGATATAGAGTATGTGAAATTTTATTCAGATGAATAAGTATAAAGGATAACCTTCGATATACAAGGTCATATTTTCAAATTGAATGACATGTACAATAGCCCTCTTAAACACTTTTTGAACACATATTAGGTGTTTAGCAAATATCAAAAAAGGAAAGAGACATTCTTTTTTAGACGGACTACAAGGGAATGTAAGACAAACAAATTGAAACGGAAGGAGGAAGTAATTTCTTTCATATTAATGAACCTGTTAGTATTGGGTATCAGGGGACAATATCTTTCCCAGTAATTGTTTTTAAGACATCCCCATAAATTGAATTGATTTTATGACACAATGGAAGCCACTACTTGTAGTTTGTTTAGATTGATAAATACTCCTTGGAAATCTCTGTGAATTGTATGATTTTAGTACTAACGTTCGCTAAAGATTCCAAAACCTTTTGAGATTACAACACCAAAAATCATTAGCCTATCTTGTTGCTTAGCTCATGAATTGGCAGAATTGCAGAAGGACTAAGTATCACTTGTTGTGAAAGATTCCAAATCTCCTATTAATTGTGAATAGAGGATACAGATTAGTAGGCATAGCTTTTGGGTGAAGTAGCTTATGGGCGGAATATATGCTGAATAGAAGGAAAATGATTAAATTTGAGGCTTGAGACACAAAGAGGAAGAGGTTGGGATATGATAGGCTTAGAAAAATTGATTTTTTTTAAAAAAGGCTCCCACACACGAATCCCAATGTAATTTTTAAATCAACTCCCAACCTTTAACCCCACCCGCGATTCTTCTGTTCAAAGGAAGCCTCCCTCCCTCTTTCTTTTCTGAAAATCTCCTTCCACCAAAGCCTCTTCGAGACACCCGCGGCTCAATCCCAAAAAGAGTCATCACCAGAAAGTCCCTCACGCACTCGCATGCGCCACCACTTCTTCTCAGTCTTCGACGTCACGTGAGGCACGCGCCGGCGCGTGAGTCGACAAAACTCAAAATTCCTTCTTTTTTGTCGTTCGATCCAGGCCACAAGGGATTTCACCTCCCACTCCTCTTTCGTTTAAAGCACTTTCGTCTCTTTTCTTCAATTTTAAGGGGAGAGATGGATAGCATAATCTTTTTCAAATTAGGGTAAGTCTTATGACTTAACTGATAACGAGCTAGCCTCTGATTCTAGGTTTAAATGGGTAGAGAGTGTTGCATGGTATGTGAGAAAAATGAATTTGAGTAGAGTAGCTCTACAGTGGCTATGCAGAAGATTCAATGAAGCTTCAGAAATCAAAGGAAAATTCTTCAAAACTTGGAGATGCAGAGATTTAACTACTCTTATTTATTTCTCTTTGAAGTACAATAAATATGGTAGATTTATGTGTGTTATTACTGTTAAAGGAGAGATGACCTCTTCTTCTCAGACTTCGACGTCACACGCGACACGCGCTGGTGTGTGAGTCGACAAAACTCAGAATCCCTTCTTTTTTTGTGGTTCAATCCAGGCCACAAGGGATTTCACCTCCCACTCCGCTTCCGTTTAAAGCACTTTCTTTTCTTTTCTTCAATTTTCAGGGGGGAAATGGACAACATAATCTTTTTCAAATTAGGGAGTAAGTCTTATGACTTAACTAATACCAAGCTAGCCTCAGATTCTAGGTTTGAATGGGTAGAGAGTGTTGGGCGGTATGTGAGAAAAATGAAGTTGAGTAGAGTAGCTCTACATTTCCTATGCAGAAGATTTAATGAAGCTTCAGAATTCAAAGGAAAATACTTCAAAACTTGGAGATGCAGAGATTTAACTATTATTTATTGCTCTTTGAAGTACAATAAATATGGTAGATTTATGTCTGTTATTATTGTTAAGGGAGAGCTGACCACTTCTTCTCAGACTTTGACGTCACGCGCTACACGCGTCGGCGCGTGAGTCGACAAAACTCAGAATTCCTTCTTTTTTGTGGTTCGCTCCACGCCACAAGGGATTTCACCTCCCACTTCACTTTCGTTTAAATTACTTTCGTCTCTTTTCTTCAATTTTCAGGGGAGAGGTGGATAGCATAATCTATTTCAAATTAGGGGGTAAGTCTTATGACTTAACTGATAACGAGCTAGCCTCTGATTCTAGGTTTAAATGAGCGGAGAGTGTTGCATGATATGTGAGAAAAAATGAAGTTGAGTAGAGTAGCTCTACAGTTGCCATGCAGAAGATTTAATGAAGCTTCATAAATCAAAGGAAAATCCTTCAAAACTTGGAGATGCAGAGATTTAACTACTCTTATTTATTGCTCTTTGAAGTACAATAAATATGGTAGATTTATTTATGTTATTACTGTTAAAGGAGAGATGACCTCTTCTTCTCAGACTTCGACGTCACACGCGACACGCGCTGGTGTGTGAGTCGACAAAACTCAGAATCCCTTCTTTTTTTGTGGTTCAATCCAGGCCACAAGGGATTTCACCTCCCACTCCGCTTCCGTTTAAAGCACTTTCTTTTCTTTTCTTCAATTTTCAGGGGGGAAATGGACAACATAATTTTTTTCAAATTAGGGAGTAAGTCTTATGACTTAACTAATACCAAGCTAGCCTCAGATTCTAGGTTTGAATGGGTAGAGAGTGTTGGGCGGTATGTGAGAAAAATGAAGTTGAGTAGAGTAGCTCTACATTTCCTATGCAGAAGATTTAATGAAGCTTCAGAATTCAAAGGAAAATACTTCAAAACTTGGAGATGCAAAGATTTAACTATTATTTATTGCTCTTTGAAGTACAATAAATATGGTAGATTTATGTCTGTTATTATTGTTAAGGGAGAGCTGACCACTTCTTCTCAGACTTCGACGTCACGCGCTACACGCGTCGGCGCGTGAGTCGACAAAACTCAGAATTCCTTCTTTTTTGTGGTTCGCTCCACGCCACAAGGGATTTCACCTCCCACTTCACTTTCGTTTAAATTACTTTCTTTTCTTTTCTTCAATTTTCAGGGGAGAGGTGGATAACAAAATCTATTTCAAATTAGGGGGTAAGTCTTATGACTTAACTGATAACGAGCTAGCTCTGATTCTAGGTTTGAATGAGCGGAGAGTGTTGCGTGATATGTGAGAAAAAATGAAGTTGAGTAGAGTAGCTCTACAGTTGCTATGCAGAAGATTTAATGAAGCTTCATAAATCAAAGGAAAATCCTTCAAAACTTGGAGATGCAAAGATTTAACTACTCTTATTTATTGCTCTTTCAAGTACAATAAATATGGTAGATTTATGTCTGTTATTACTGTAAAAGGAGAGATGACCCCTTCTTCTAAGACTTCGACGTCACGCGCGGACAACTTTCGCGCGTGAGTCGACAAAACTCAGAGTTCCTTTTTTTTTGGTTCGATCCAGACCACAAGGGATTTCACCTCTCATTTCACTTTCGTTTAAAGTACTTTCTTTTCTTTTCTTCAATTTTTAGGGGAGAGATGGATAACAAAATCTTTTTCAAATTATGGGGTAATTCTTAAGACTTAAATGATAACGAGCTAGCTCTGATTCTAGGTTTGAATGGGTGGAGGGTGTTGCACGGTATGTGAGAAAAATGAAGTTGAGTAGAGTAGCTCTACAATGGCTATGCAGAAGATTTAATGAAGCTTCAGAAATTAAAGGAAAATCCTTCAAAACTTGGAGATGCAGAGATTTAACTACTCTTATTTATTGCTCTTTGAAGTACAACAAATATGGTAGATTTATGTCTGTTATTACTGTTAAAGGAGAGATGACCTCTTCTTCTCAGACTTTGACGTCACACGCGACACGCGCTGGTGCGTGAGTTGACAAAACTCAGAATCCCTTCTTTTTTTGTGGTTCAATCCAGGCCACAAGGGATTTCACCTCCCACTCCGCTTTCGTTTAAAGCACTTTCTTTTCTTTTCTTCAATTTTCAGGGGGGAAATGGACAACATAATCTTTTTCAAATTAGGGGGTAAGTCTTATGACTTAACTAATACCAAGCTAGCCTCAAATTCTAGGTCTGAATGGGTGGAGAGTGTTGGGCGGTATGTGAGAAAAATGAAGTTGAGTAGAGTAGCTCTACATTTCTTATGCAGAAGATTTAGTGAAGCTTCAGAATTCAAAGGAAAATACTTCAAAACTTGGAGATGCAGAGATTTAACTATTATTTATTGCTCTTTGAAGTATAATAAATATGGTAGATTTATGTCTGTTATTATTGTTAAGGGAGAGCTGACCACTTATTCTCAAACTTCGACGTCACGCGCCGGTGCGTGAGTCGACAAAACTCAGAATTCCTTCTTTTTTGTGGTTCGCTCCAGGCCACAAGGGATTTCACCTCCCACTTCGCTTTCGTTTAAAGTACTTTCTATTCTTTTCTTCAATTTTCAGGGGAGAGATGGATAACAAAATCTATTTCAAATTGAGGGGTAAGTCTTATGACTTAAATGAAACGAGCTAGCTCTGATTCTAGGTTTGAATGGGCGGAGAGTGTTGCGCGGTATGTGAGAAAAATGAAGTTGAGTAGAGTAGCTCTACAGTGGCTATGCAGGAGATTTAATGAAGCTTCATAATTCAAAGGAAAATCCTTCAAAACTTGGAGATGCAGAGATTTAACTACTCTTATTTATTGCTCTTTGAAGTACAATAAATATGGTAGATTTATGTATGTTATTACTGTTAAAGGAGAGATGACCCCTTCTTCTCAGACTTCGACGTCACGCGCGACACGCTTCCGCGCGTGAGTCGACAAAACTCAGAGTTCCTTTTTTTATTGGTTCGATCCAGGCCACAAGGGATTTCACCTCCCAATTCGCTTTCGTTTGAAGCACTTTCGTCTGTTTTCTTCAATTTTTAGGGGAGAGATGGATAACAAAATCTTTTTCAAATTAGGGGTAAGTCTTATGACTTAACTGATAACGAGCTAGCTCAAATTTTAGGTTTGAATGGGCGGAGAGTGTCGCGCAGTATGTGAGAAAAATGAAGTTGAGTAGAGTAGTTCTACAGTGGCTATGCAGACGATTTAATGAAACTTCAGAAATCAAAGGAAAATCCTTCAAAACTTGGAGATGCAGAGATTTAACTACTCTTATTTATTGCTCTTTGAAGTACAATAAATATGGTAGATTTATGTCTTTTATTACTGTTAAAGGAGAGATGACCCCTTCATCTCAGACTTTGACGTCACGCGCGACACGCTTCCGCGCGTGAGTCGACAAAACTCAGAGTTCCCTTTTTTTTGGTTCGATCCAAGCCACAAGGGATGTAACCTCCCACTTCGCTTTCGTTTAAAGTACTTTCTTTTCTTTTCATCAATTTTTAGGGGAGAGATGGATAACAAAATCTTTTTCAAATTAAGGGGTAAGTCTTATGACTTATCTGATAACGAGCTAGCTCTCATTCTAGGTTTGAATGGGCGGAGAGTGTAGCACGGTATGTGAGAAAAATGAAGTTGAGTAGAGTAGCTCTACAGTGGCTATGTAGAAGATTTAATGAAGCTTCTGAAATCAAAGGAAAATCCTTCAAAACTTTGAGATGCAGAGATTTAACTACTCTTGTTTATTGCTCTTTGAAGTACAATAAATAGGCAGATTTATGTCTGTTATTACTGTTAAGAGAGAGCTGACCACTTCTTCAAGACTTCGATGTCACGCGCGACACGCGCCGACGCGTGAGTTGATAAAACTCAGAATTCCTTCTTTTTTGGGGTTCGATCCAGGCCACAAGGGATTTCACCTCCCACTCCGCTTTCGTTTAAAGCACTTTCTTTTCTTTTCTTCAATTTTCAGGGGAGAGATGTATAACAAAATCTTTTTCAAATTAGGGGGTAAGTCTTATGACTTAACTAATACCAAGCTAGCCTCAGATTCTAGGTTTGAATGGGTGGAGAGTGTTGGGCGGTATGTGAGAAAAATGAAGTTGAGTAGAGTAGCTCTACATTTCCTATGCATAAGATTTAATGAAGCTTCATAAATCGAAGGAAAATCCTTCAAAACTTGGAGATGCAAATTAGTGAATAATCACCAAATGTCCTTTATTCAAGGAAGACAAATTATGGATGTCGTGTCAATAGCAAGTGAGTGTGTAGATTCAAGGATTAAAGGAGAGATCCCAATAATTATGAGCAAGCTTGATATAGAAAAGGCATATGATCATGTCAATTGGGAGTTTCTACTTAATATCTTGAGGCAGATGGGATTTGGAGACAAATGACTTAAATGGATAGGTTTTTGCATCAAAACTGTCAGGTTCTTCATACTTGTTAATGGAGAACCTTATGAAGAGTCTGTTGGTCTTTTTCCCTCTGAGAGAGTAGAGAGGATTACAACAGGGACATCCTCTCTCTTCTTTCTTATTTATTTTAGCTATGGAGGGTCTTAACAGTATGATTAGAGTGGCCAATCAAAAGGACTAGATAAAGGGTTTCAACATTGGTAATCAATTAGGGGTCATTTTGCAAATAAGTCACCTTTATATGCAAATGACACACTAATATTTTGTGATGCAAAGGCAGAACAAGTTAGTTACATTAGAGTTGTTTTGGTGATTTCTGAGGCCATCTCTGGATTGGCTGTGAACTGGGGGAGAAGCAGCATCTTCCAAGTCAAGGAAGTGACAAATATTCAGATGTTGGCAAAAATTTTGCAATGCAAGATAGAGCACTTACCAATTACTTACCTGGGAATGCCTTTGGGGAATAATCACAAGGTTTTGTTTATTTGGGATGGAATCATTGAGAAGACAGTGAAGAGGTTGGCTAATTTGAAGGCAAACTATCTGTCTCTGGGAGGAAGAGTCCCTCTGATCAATTCGGTCCTAGATGCGTTGCCTACATATATTATGTCACTTTTCCCTTTACCAACAAAAGGTAGAAGAGAGATTGGATAAGTTGAAGTGTAATTTCCTATGGTCGGGGAACAAAGAAGGCAAAAAATACACTTAGTTAAATGACAGACAACCTTACTGAGCAAGAAGACTGGGGGTCTTCCCATAATAAAATGAAGAGTCTTGAATAAAAGTCTACTTTCTAAATGGCTTTGGAGATTCGTGGTTGAAAATCAGGCATTATGGAGAAGAGCAATTCTCAACAAGTATGGGTAGACCAAGGAGTGGGTGTCTAATGTAGTAGATAGCACGTATGGGGTATCAATTTAGATATCAATCAGAAATTTATGGGATAGTCTAAACTCTAAAGAAGAATTTAGTGGTCAAGGTAGGAGAGGGTAGCAAAATATTTTTTTTGGAAGGACAAGTTAATTGGACAAGAGTGTCTAAACTTAGTCTTCCCCGATCTCTTTTCGTTTTGTACCAACCTTGAGGCTAAAATTGCTGAGATTTGGTCTCCTCAGGAAAAGAACCTCACATTTAGGAGAAATCTAAATGATTGGGAAGTGGATAGAATTGCTGAACTGCTACTCAAATTAGGTGAATTCATGGGCCTTACTACAGAAGCAGATGGTATAAGATGAAAACATGACTCTGATGGCAAATTCTCTTTGCGTCGAGTATATAGGAGAGAGGTCATGACTCACTTCGGGGAATTCATGGTCCATGGAAACAAATATGGAAAGGCAACACCCCAACCAAGGTGAAATGCTTCACCTGGTTGGTCACTAAAAGGGCATGTCTCACTCAGGAAAAACTCAAGAAAAGAGGCTTTCAGATTGTCTCCAGAAGTGTTTTTTGGTCATGAGAAGGAAGAAACTAACAACCACTTATTCCTACACTGTAAGGTTATTGTTTAGGTGTGGCGCATGGTCTACAACATTTCTCAAAAGCCCTAGGTGATGCCAGAATATACTGCTGATCTTTTGAGCTGCTGGATAAGGAGGGGGGAGAGAGACCCAAAAAAGATGGTGGGCTATTTGGAGAGAAAGAAACCTTAGGTTCCATGAGAATATTACTAACAATATGCAGAAAGTTAAAGAAAATTGCATCAACATGTTTTTTTGGTGTAAATAAGAGGTATAGAAGTAGTAGATCAGTTGATAGATTTCCTAGGATCAATGTAATTATAGTTTTAGCTTGCAACTTTTTGGAGGTAGCCAGCATACCCTTAATGCTGAAGAGTACAACTTTAACTTTGTCAAAAAAAAAAACAAGAGGAAGAGGTTGGGGTTGAGCGTAATGGGCTTCAAAGCAACTACTTTAGGTGATATTAATGATGTTAAATGGTTGATGTGGTTGAGAAGCCTCTGAGTAATTTTTCGAGGTGCAATTTACGAGTTGATAGTGATTCTCTCTTTCTATTTTGACATCAGAGGAACATGATCCGTGAGGCAACAACATTTTTGTTGGATGTTCTGACTTCTGAAGCCTAACCTTCCAGAGCATGGTTACCTGCAGACTAAGGTATTTGTTCCCTTCTCATTAAGGGACATCTTTATGCTTATACATTTTTCTTTGGTAAATACTAGCCATGAAATATTTTTGGCCCTTTTCATTGTCATTATGATTACAACAACTATGCCTCAAGAAGTTAACTTGGTAAGAAACTTATTGATGATAATAGAAAGTGACTGAAGCTCTTTAAAATATTAGAAAGTATCAAAACAAACAAGAAACTTCTTGATGATAATGGGAAGTGAACTTTGAATGTTGGGAAGTATTGGGGGCAATTTAGTGAGTGGAGTAAGACGAATGTGGAAAAGAGGAAATCAAGGCAAAGAAGAAACTTGTTGATGATAATAAAAAGTAATTGGAGCTTTTTGGGCCTTGTTGAAGTATCCAGGACAATTTAAGACATTTAGTATTATGAATGTGGCAAAGAAGTGGAATTTCAATTTAGAAATATTAGAGGAGTAAAAAGTGAGACATCTTCCTGCAGCCAATATGCACAAATGTTGAGTAAATGATTGTTGGGATTTATGGAGTTCTGATGATTGATAAAGAATGATGAAATACGTCGTCAACATGGTCTAAAGGTACAATATCATGAGCAATTGAATTCGGACAAACATTTAAAATAAATAAAAACAAGAATGCAAAAATCAAGAAATGGATAATGCCAATTTCATGATAAAACTCAAGGAAACAAAGTAGTGAAGAATTAAAGAGAAAGAATCAATGAGTTTGATTTGAAGAGGGAGTCTAAAGAGAAAAGGAGTTTAATTGAAGAAGTAGTACTCACTTGAAGTAGAATTTTAAGTCAAAAGAGTTTAAGTCAATGTGGAGTTTAAGGTGAAGTATAGTTCTATGAAGAATTGTTCTTTAATAGCGGTGAATTCGTTCAAAATAGTTGTGCACTTATCGATCAAAAAGGACAATTGAAATAATTGACTTCGTAAGTGTTATCAGCAAATTGAAGGAACACATTGAAGAACCTGGTCCTATTAGAGTTGATGCATTGGGAGTTCTTCTTTGTTATTGAGTCTTGATGAGTTCTAAACTGAATTAAGAGTGTTGTCTTCAAGTTGGGATAGCTCGAAGAGTTGGGAACACATACCTTGGAGGTTTGTATTGAAGTTTAGGAATTAAAGTTAGTTTCTAGGATTGTAGGAGTTAATAATCTAAATATACAAGCTTAGGAATTAGAAGTTCCTCGGATTGCAAGACTAGTAATATGAATCCATAATTTGAAATTTAGGAATTAAAGTTAGTTCCTTAGGTTATAGAGTTTGTAATCTTAAACGATTAAGGCTCATTGATTTAGTGAAGTTGGAGTTAAATCCTATAGGGGTACAATTCATGGTTTTTTACACCTTTTGAGTTGGGCATTCTTCACATAAAAATATTGCGTGCTTTTTGTTTACTATTCTTCTTACTTTATTTGAACATGTTAGGAAACTTGTTTTACCGCAATCAAGTCTCAAGGGCCAAGAGCTTATATGGGCCGCGCTTATATGCCTAGTTTTAAATGGGCTTAAAAAATCCTATATCAATCCTATCCCAATAACGAGTTGGGTTGGGCCGGCCCATGGGCTAAGCCTATTTTGACGGCTCTACTCAGTAGCTTTTGATTTTTAACTCTATATTTGTGTCAAAAAAAATCAACATAATATGTACAGCTAATATATCCCGGTTCCAATCATTGACTTGACTTAAAATTCAGAACAAATAAACTTAAAATTTCAATCCAACTTTGACTTAGATATCTTAGGTTTTTTTATGGTGCAATGCCATAGATTCATTTTACTGATGTATTATTTTAGTTCTTATACTTCTCTTCAAAATATAAATTCTTCTGTATGTTATAATTATCTCATATAGCCATTATAATTCTAGGGAAAATGATATATAGGAGTTGACTAATATCATTATGTAAAAGAAAGAGCTTAGGAGTTACTGCTATTTTCCACTAAGCAAGTTAAAGCCCACAGATTTCTGTTAATTAATTGTGTAGAAAAATTTTAGTGTTGACTAAGACTAGCGTTGAAACTAGTTTTCTTCTCAAAATCTTTTGAAATGTGATTCAATATTACATTTTCTACCTATTATACCCTCAATTTATTACTTTGAAAAAAATAAAACTTTTTTGAAATCTTGAGTTTTTATTTCATCTACTTCATAATTAATAGGGGTAAAATGGTAAACTCACTATGTCAATTATTGTTTTATTAATAGATATGTCAATTGAATGGAAAAGTAATTAAGGATAGCGCGAGTATTAGATTGCGAGTGTTTTGACTTGCAAATAAGTCAACACATTAAATGCTTTGACTTTTTTTTTTCCTTTTGCTTTTTTTGTTGATCTATATATTTCGTAGTTCACTGAAGAACAACCCTGCATCTAACTTCCAGTTCTTGTTTAATTTGCATTGTTCCATGGGTCGCACTAAGCTTGTGATGAAGAAAATTGAGGATCCAACATCCCGTCAACAGTTCTATTCAAAGCGCAAGGATACCATCCTTAAGAAGTCCAATGAGTTGGCTGTTTTATGTGATGTGGATGTTGGTCTTCTAATGTTTTCTCCAGCCGGCGAAGTGACTAGCTATTCTAGCAAAGAACGGTGAGTGAAATTTCTACGATGAACATTATATACGTTTCCTTTATAGTACATATTTTCATATGATTTTTTTTTTTGGTTGTTTAGTCTTGAGGATGTCATGCTCCTTGCTATGAACAAGGCTGGTGAACTGAACAAGCTGTATGTTTATTTCAATATGTCAGATACATGAATTAGACTTTGCCAATTCTAGTTTAACTGACCATTGATCTAAGTTTTTTTTTTGTTGTTGTTGAAGATCTCCTGAAAATCCAAATGAACAGGTACTGAGTTTTACGCATTGATCAGCAGTCTCTTCCGATAAGTCCTTGGAATTTCATCTGATCTTTTATTTTGCAGGCTTTGATGGACTCTCTCACACAATCAAAACATGAAGCCGAAATGGTGGAGAAGATAGCGATGTATACCACTCTCCTCTTGCACTCTGTGTATATATATTAGTCTATTAGTTTGTCAGAGCAGATACATGACTTCTCGAGTTCATTTCTTTTGCTTTTTGCTTTTTTTTTTTTGTATGGTATTTTCTACATGATTGAATAATTTTTTTCTTTTGTTGGGTATTTTTACGATGCTGATGATTGATCAACGTGCTTTAGTGTTGAGGTAAGATTAATATGTAGAAAGGGAATCACCTTCCGCCAATATTTGTTATTACTGAAAACTCGTAAATTGATATAGTTTTTTTTTTTTATGTATTTTCAAAACAGGCTCATGAGGAGAAGCTTAATGGGGTCAAAGAAAGACTAAGTGAAGCACAACAGAAAATAAGGTTGAAGAGTTGCTGACTCTATATTTCCTTCCTGTCTCTCTTTTTTTGATATTCTAAAAGATTTCCCTCTTTTATAATGATTTTTTCCGTTGGATCGAGTAGGTATTACGAACCACAAGTGGAGAGTATCAACTCTGTCCAAGAAGCTGATGCATATGAGAAGTTCATTTTGAGTGCTCTGGAACTGATTCAACTATCAAAGGTGAGCATATCTCCAGATGCAAATTTTTGTACTTCGATTTCTTAGGACTAGCATGATCATGTTTTGTACTCTTCTTACCAGGCAAAACTCTTGGGTGACCAGGAATTTCTCCAGAGAAATGAAAATGTTGCGGTAAGATTTTGGAAGGATGGTTAACTGTTTTTCGAACATCTATTATGGAAAGTTAACTGTTTGCATTATAATTTTTTAGGTGTCTTCTGTCAACGCAGAGGCTATGGCTGCTGAAGGTAACGAATCTTCATATTCAAATACTTAGTGGTAACTCTTTTGAGTGTATATGTAGTGTAAATTTGGGCCATTTTTGGTAAACTAGATGGCTGAATGGTATATATGTTAGTAAATATATACAATAACTTTTACCCCTCAGTCTCAAACAAATTGATGTCGGAATTGGTACTTCTTCATTTAAAACTCATTTCATACCATCATCTATAGCCACTTTTTTCCAAAGAGGAATCTATTGAATCTTGCTTCTCTGGATTTGTAGGAACCAGTGGGGGATGGATGTATTGAGGAAACAGGCCGGATCACGGCGGGGAAGTAGCTGAGGATGTCCAACAGCTATAGCAGGAATAATAGTTATACTAGTTTATAGGTTAAGAACTTAGTAGAATAAATAACTTGCCCCTATCAGGCAAGCAAAAGTATGAATAATGTTGCATTTGTCTATTGTGAATGCAACTATTTGAATATGGCATCTGAATATGGCATCAAAACATAGCTATTGTGTTTTGAAATAGAAAACA</genome_strand>
        <mrna_strand>GCCAGAGGCAAAATTTCATGTGAAACCTAAATATCCATAGCCCTCCGATCTGAAGCCTCTGATATCCTTCCATG.....................................................................................................GGTCTAATGTAATCCGAAGGCATAACTCAACTAGTATGTGGATGGACAGTACATTGCCTCCGGTCTATTTGATG........................................................................................................................TTATAATTCTCCTACCATTAAGTTCAATTTTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCAAGTCCACAATATGTAGAGTGTCCTCTTCCTTTTATGGAGTTATGGTCTAATAGCCAAAGAGGAAAAAGAACATCAAGAAGGAAAAGCTCTATGTGGTATTGAGGATTCTCATCAAATTAAAA...........................................................................................TGGATACTCTCTCCTAATAGAAAAGTTAACGAACAATTAATCATGAGGGAACTTCATGGCATTTGTAGCCTAACTTGAATAAGTTTCTTGGATTGGCTTGACCTAAATAGAAGGAAGCTCGAGCTACATTGCAAAAGCTTTTATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................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......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTGATGAAGAAAATTGAGGATCCAACATCCCGTCAACAGTTCTATTCAAAGCGCAAGGATACCATCCTTAAGAAGTCCAATGAGTTGGCTGTTTTATGTGATGTGGATGTTGGTCTTCTAATGTTTTCTCCAGCCGGCGAAGTGACTAGCTATTCTAGCAAAGAACG....................................................................................TCTTGAGGATGTCATGCTCCTTGCTATGAACAAGGCTGGTGAACTGAACAAGCT.................................................................................................ATCTCCTGAAAATCCAAATGAACAG............................................................................GCTTTGATGGACTCTCTCACACAATCAAAACATGAAGCCGAAATGGTGGAGAAGATAGCGAT...................................................................................................................................................................................................TGTTGAG........................................................................................................GCTCATGAGGAGAAGCTTAATGGGGTCAAAGAAAGACTAAGTGAAGCACAACAGAAAATAAG......................................................................................................GTATTACGAACCACAAGTGGAGAGTATCAACTCTGTCCAAGAAGCTGATGCATATGAGAAGTTCATTTTGAGTGCTCTGGAACTGATTCAACTATCAAAG.................................................................................GCAAAACTCTTGGGTGACCAGGAATTTCTCCAGAGAAATGAAAATGTTGCG...............................................................................GTGTCTTCTGTCAACGCAGAGGCTATGGCTGCTGAAG....................................................................................................................................................................................................................................................................GAACCAGTGGGGGATGGATGTATTGAGGAAACAGGCCGGATCACGGCGGGGAAGTAGCTGAGGATGTCCAACAGCTATAGCAGGAATAATAGTTATACTAGTTTATAGGTTAAGAACTTAGTAGAATAAATAACTTGCCCCTATCAGGCAAGCAAAAGTATGAATAATGTTGCATTTGTCTATTGTGAATGCAACTATTTGAATATGGCATCTGAATATGGCATCAAAACATAGCTATTGTGTTTTGAAATAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-GUJ3m/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U337769" ref_strand="+" ref_description="SGN-U337769        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>aaaatttcatgtgaaacctaaatatccatagccctccgatctgaagcctctgatatccttccatgggtctaatgtaatccgaaggcataactcaactagtatgtggatggacagtacattgcctccggtctatttgatggtccgttactcaaacactccgattgtttcaatcgggttgatttgattatcattttcattcagtttttgaagtttttatcaaatgtgacattgagttctgcttggttgaacgttttggcagttataattctcctaccattaagttcaattttaaggtaatcttcattgatttttatgctctgttttgtcccattgtttagatggaatttataattctcccactgttaagttcacttctagctaatttttgttgatttatgggaaaaaagctcaggtgtcatgtactcttagctttgtaaaaagtgatattgtattttgagagtgtcgggttcgttcggttttcatttgattcagttctgaagatttaagtgttctgttatgctcggtttggttgtagttttagcaatttcactacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-GUJ3m/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="91320" stop="92575"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91620" g_stop="91684" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="65" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91685" i_stop="91785" i_length="101">
            <donor d_prob="0.772" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91786" g_stop="92275" g_length="490"/>
          <reference_exon_boundary r_type="cDNA" r_start="66" r_stop="555" r_length="490" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-U337769" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>555</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U337769" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91620" e_stop="91684"/>
          <exon e_start="91786" e_stop="92275"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATTTCATGTGAAACCTAAATATCCATAGCCCTCCGATCTGAAGCCTCTGATATCCTTCCATGGTAGTCTCTCTATCCCTCAGATCATGTTTCCATCGAAGCTCCTCTTGTTGTTGAGTATAAAAAAATTTAAGGTTTTGATTTCTCTGTCCCTGTTTTTTTAGGGTCTAATGTAATCCGAAGGCATAACTCAACTAGTATGTGGATGGACAGTACATTGCCTCCGGTCTATTTGATGGTCCGTTACTCAAACACTCCGATTGTTTCAATCGGGTTGATTTGATTATCATTTTCATTCAGTTTTTGAAGTTTTTATCAAATGTGACATTGAGTTCTGCTTGGTTGAACGTTTTGGCAGTTATAATTCTCCTACCATTAAGTTCAATTTTAAGGTAATCTTCATTGATTTTTATGCTCTGTTTTGTCCCATTGTTTAGATGGAATTTATAATTCTCCCACTGTTAAGTTCACTTCTAGCTAATTTTTGTTGATTTATGGGAAAAAAGCTCAGGTGTCATGTACTCTTAGCTTTGTAAAAAGTGATATTGTATTTTGAGAGTGTCGGGTTCGTTCGGTTTTCATTTGATTCAGTTCTGAAGATTTAAGTGTTCTGTTATGCTCGGTTTGGTTGTAGTTTTAGCAATTTCACTACTA</genome_strand>
        <mrna_strand>AAAATTTCATGTGAAACCTAAATATCCATAGCCCTCCGATCTGAAGCCTCTGATATCCTTCCATG.....................................................................................................GGTCTAATGTAATCCGAAGGCATAACTCAACTAGTATGTGGATGGACAGTACATTGCCTCCGGTCTATTTGATGGTCCGTTACTCAAACACTCCGATTGTTTCAATCGGGTTGATTTGATTATCATTTTCATTCAGTTTTTGAAGTTTTTATCAAATGTGACATTGAGTTCTGCTTGGTTGAACGTTTTGGCAGTTATAATTCTCCTACCATTAAGTTCAATTTTAAGGTAATCTTCATTGATTTTTATGCTCTGTTTTGTCCCATTGTTTAGATGGAATTTATAATTCTCCCACTGTTAAGTTCACTTCTAGCTAATTTTTGTTGATTTATGGGAAAAAAGCTCAGGTGTCATGTACTCTTAGCTTTGTAAAAAGTGATATTGTATTTTGAGAGTGTCGGGTTCGTTCGGTTTTCATTTGATTCAGTTCTGAAGATTTAAGTGTTCTGTTATGCTCGGTTTGGTTGTAGTTTTAGCAATTTCACTACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-GUJ3m/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U344111" ref_strand="+" ref_description="SGN-U344111        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | formin homology 2 domain-containing protein / FH2 domain-containing protein, contains formin homology 2 domain, Pfam:PF02181 | chr5:22214855-22219249 REVERSE | Aliases: None(evalue: 2e-53, score=206) genbank/nr: gi|24954845|gb|AAN64319.1| formin I2I isoform; I-2Int4 [Lycopersicon esculentum](evalue: 4e-111, score=404)">
      <seq>cacgaggcagcacgtaaattaagagagaaccaaagcactaccagtgtacagacagaagatcttgtagaagatcctgctcaggagtcggcagattatcatcgtaaccttggtcttcagatggtttctggtttaagcaacgagcttgagaatgtaagaaaagcttcacttattgacggcgagaacttaagtgcagctgtcatgaagcttaatcactcactcatgaaaactaaagagtttctggacactgatatgagaagtttggaggatgaaagtaagttccgtgatacactcacaaattttatccaacatgcggaacaggacattacttgcatactagaagaagagaaaaagataatgtctttggttaagagcacaggagattacttccatggaaattcagggaaggatgaaggcttgcgtctcttttcagtcgttagtgatttcttgattatgttggacaaggcatgtacagtggtgagaaactcaacgaagttaccagttaagattcctaaaaaagggacattaacatctccttcccaagaatcctgtcctgagtctttgcaagacatacgtaaacaactatttcctgcaatccaggagcgacagatgcactattctagttcagacgacgagagctcaagcccgtagctgtctatttaggtgtcagagtactttggagctaatatggcttggataatagtccacagaagtatgtatttaacgactatatgaggcctaaggtgtgcctcctacacccagttagcaaacacatgctctacgagatagagtgaatagacattttgcttcaatgatctcttcgagtcctagcactagcggtaggaagaatggctatagtatagatgccatagtagttattgcatggtctactacaacgatccacagagttaaaccacagcctctcactgtctgtagtcacctttatctataacaatccaaatatcgagatggtaatggtactgaaatctcctaaatatttgttaaattatatttagtatgtattggaagttagaccagattcgtatagtttcagcttctttttctcgtcaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-GUJ3m/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="114399" stop="116150"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="114698" g_stop="115356" g_length="659"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="660" r_length="660" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="115357" i_stop="115440" i_length="84">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="115441" g_stop="115849" g_length="409"/>
          <reference_exon_boundary r_type="cDNA" r_start="661" r_stop="1069" r_length="409" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1070" polyA_stop="1085"/>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-U344111" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>1068</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U344111" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="114698" e_stop="115356"/>
          <exon e_start="115441" e_stop="115849"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAGAG-CAGCACGTAAATTAAGAGAGAACCAAAGCACTACCAGTGTACAGACAGAAGATCTTGTAGAAGATCCTGCTCAGGAGTCGGCAGATTATCATCGTAACCTTGGTCTTCAGATGGTTTCTGGTTTAAGCAACGAGCTTGAGAATGTAAGAAAAGCTTCACTTATTGACGGCGAGAACTTAAGTGCAGCTGTCATGAAGCTTAATCACTCACTCATGAAAACTAAAGAGTTTCTGGACACTGATATGAGAAGTTTGGAGGATGAAAGTAAGTTCCGTGATACACTCACAAATTTTATCCAACATGCGGAACAGGACATTACTTGCATACTAGAAGAAGAGAAAAAGATAATGTCTTTGGTTAAGAGCACAGGAGATTACTTCCATGGAAATTCAGGGAAGGATGAAGGCTTGCGTCTCTTTTCAGTCGTTAGTGATTTCTTGATTATGTTGGACAAGGCATGTACAGTGGTGAGAAACTCAACGAAGTTACCAGTTAAGATTCCTAAAAAAGGGACATTAACATCTCCTTCCCAAGAATCCTGTCCTGAGTCTTTGCAAGACATACGTAAACAACTATTTCCTGCAATCCAGGAGCGACAGATGCACTATTCTAGTTCAGACGACGAGAGCTCAAGCCCGTAGCTGTCTATTTAGGTATGTCTATTTGTAAAACTGATTTCCCATGAAAGTAATGTAAAGAGGGCTGATGAATCATAACTTTGCTGTTTTGATGTGTAGGTGTCAGAGTACTTTGGAGCTAATATGGCTTGGATAATAGTCCACAGAAGTATGTATTTAACGACTATATGAGGCCTAAGGTGTGCCTCCTACACCCAGTTAGCAAACACATGCTCTACGAGATAGAGTGAATAGACATTTTGCTTCAATGATCTCTTCGAGTCCTAGCACTAGCGGTAGGAAGAATGGCTATAGTATAGATGCCATAGTAGTTATTGCATGGTCTACTACAACGATCCACAGAGTTAAACCACAGCCTCTCACTGTCTGTAGTCACCTTTATCTATAACAATCCAAATATCGAGATGGTAATGGTACTGAAATCTCCTAAATATTTGTTAAATTATATTTAGTATGTATTGGAAGTTAGACCAGATTCGTATAGTTTCAGCTTCTTTTTCTCGTCAAG</genome_strand>
        <mrna_strand>CACGAGGCAGCACGTAAATTAAGAGAGAACCAAAGCACTACCAGTGTACAGACAGAAGATCTTGTAGAAGATCCTGCTCAGGAGTCGGCAGATTATCATCGTAACCTTGGTCTTCAGATGGTTTCTGGTTTAAGCAACGAGCTTGAGAATGTAAGAAAAGCTTCACTTATTGACGGCGAGAACTTAAGTGCAGCTGTCATGAAGCTTAATCACTCACTCATGAAAACTAAAGAGTTTCTGGACACTGATATGAGAAGTTTGGAGGATGAAAGTAAGTTCCGTGATACACTCACAAATTTTATCCAACATGCGGAACAGGACATTACTTGCATACTAGAAGAAGAGAAAAAGATAATGTCTTTGGTTAAGAGCACAGGAGATTACTTCCATGGAAATTCAGGGAAGGATGAAGGCTTGCGTCTCTTTTCAGTCGTTAGTGATTTCTTGATTATGTTGGACAAGGCATGTACAGTGGTGAGAAACTCAACGAAGTTACCAGTTAAGATTCCTAAAAAAGGGACATTAACATCTCCTTCCCAAGAATCCTGTCCTGAGTCTTTGCAAGACATACGTAAACAACTATTTCCTGCAATCCAGGAGCGACAGATGCACTATTCTAGTTCAGACGACGAGAGCTCAAGCCCGTAGCTGTCTATTTAG....................................................................................GTGTCAGAGTACTTTGGAGCTAATATGGCTTGGATAATAGTCCACAGAAGTATGTATTTAACGACTATATGAGGCCTAAGGTGTGCCTCCTACACCCAGTTAGCAAACACATGCTCTACGAGATAGAGTGAATAGACATTTTGCTTCAATGATCTCTTCGAGTCCTAGCACTAGCGGTAGGAAGAATGGCTATAGTATAGATGCCATAGTAGTTATTGCATGGTCTACTACAACGATCCACAGAGTTAAACCACAGCCTCTCACTGTCTGTAGTCACCTTTATCTATAACAATCCAAATATCGAGATGGTAATGGTACTGAAATCTCCTAAATATTTGTTAAATTATATTTAGTATGTATTGGAAGTTAGACCAGATTCGTATAGTTTCAGCTTCTTTTTCTCGTCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-GUJ3m/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U316533" ref_strand="+" ref_description="SGN-U316533        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, contains Pfam profile: PF04504 protein of unknown function, DUF573 | chr4:171497-172843 REVERSE | Aliases: A_IG005I10.6, A_IG005I10_6, F5I10.6, F5I10_6(evalue: 1e-16, score=85.1) genbank/nr: gi|14268476|emb|CAC39398.1| storekeeper protein [Solanum tuberosum](evalue: 2e-67, score=259)">
      <seq>gaacactcgaatcgactgcgaagtctaatgcaaaaggcgaagacaaggaataacgcgattccacttcaaattcggatgctgacccatcttcactttcagtatcagaagaagattagggtatgtgtagagttattaactgatttttgagtgataaatctctttttgaccgaatgattaattttgaatccttcaccatttttttccaaattcacatctaattaagaacgagaaatcacacgaaaaaaagaatttccaattaaaataactaataagatgtgattgttccgtccttcgaccagtagtgactcataaatttcactcggaatacatgtctaaatggggaaagtgattatccaactgtagaagggcgcggcaatcgattaatacattcgctttttgtataaattgagaaaaaccctacacaaagctttcatctttttgactctgcttcagcactcacccatacacatagctgatggccgaatagctctcttttcttgctttcagaaacaatggcccccaaaaccaaatcccgcttagtagaccagcctccttctgcatcgtcctctgaagaacaagaattggtggaggaatcccaggaagaagaagaagaacaatcgagggaggaagaaggagaagaagaatcaggggaagaaactgaagaacccaagacagcacatcctgttgtaaagagatccagcactcagaaactccaattttcttctgattccggcagcgagagtgggtcaggatccgaatccggacattccctgccttccccttctgcattggacttcaccatcaagcccagtgttcctgctaaagctgccaccccatcgaagccagcagcaaagaggccgcaagatacccagacagagaaagggaggaagaagcccaagattgcagaagaagaggagaaaaaatcagctgctactcctcgcaatctatggagcgatgacgaccagcttgctctactcaaaggtattgctgaatacaaggcggtaaaaggtgtggaacctattgccgatatgtctgcttttcatgaattcatcagggggaagttgcaggttgaagcttcaaataagagactccgagacaaggtaaggaggttaaagacgaaatatttgactaatgtgaaagatagtgaggagccagttttcatgaagggtcaggattatctagtttttgagcattcaaagaggatttggggtgcccctggaactagtaatggagttagcactaatggcacagctaaaattactgttgaggttaacaagagctctgaacctaagagaagtgctaaagtcagcaaacccaaggatgatgagaaacataaggaagaagagaaacaggttgctgtaaaagaggtggttaaggaggatatagttaagggtgatcaacaggatttccagtctgaatttccacatttgactgcttcatttgaaagtatggctggcatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-GUJ3m/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="124706" stop="126765"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125006" g_stop="126465" g_length="1460"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1461" r_length="1461" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-U316533" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1460</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U316533" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125006" e_stop="126465"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACACTCGAATCGACTGCGAAGTCTAATGCAAAAGGCGAAGACAAGGAATAACGCGATTCCACTTCAAATTCGGATGCTGACCCATCTTCACTTTCAGTATCAGAAGAAGATTAGGGTATGTGTAGAGTTATTAACTGATTTTTGAGTGATAAATCTCTTTTTGACCGAATGATTAATTTTGAATCCTTCACCATTTTTTTCCAAATTCACATCTAATTAAGAACGAGAAATCACACGAAAAAAAGAATTTCCAATTAAAATAACTAATAAGATGTGATTGTTCCGTCCTTCGACCAGTAGTGACTCATAAATTTCACTCGGAATACATGTCTAAATGGGGAAAGTGATTATCCAACTGTAGAAGGGCGCGGCAATCGATTAATACATTCGCTTTTTGTATAAATTGAGAAAAACCCTACACAAAGCTTTCATCTTTTTGTCTCTGCTTCAGCACTCA-CCATAGACATAGCTGTTGGCCGAATAGCTCTCTTTTCTTGCTTTCAGAAACAATGGCCCCCAAAACCAAATCCCGCTTAGTAGACCAGCCTCCTTCTGCATCGTCCTCTGAAGAACAAGAATTGGTGGAGGAATCCCAGGAAGAAGAAGAAGAACAATCGAGGGAGGAAGAAGGAGAAGAAGAATCAGGGGAAGAAACTGAAGAACCCAAGACAGCACATCCTGTTGTAAAGAGATCCAGCACTCAGAAACTCCAATTTTCTTCTGATTCCGGCAGCGAGAGTGGGTCAGGATCCGAATCCGGACATTCCCTGCCTTCCCCTTCTGCATTGGACTTCACCATCAAGCCCAGTGTTCCTGCTAAAGCTGCCACCCCATCGAAGCCAGCAGCAAAGAGGCCGCAAGATACCCAGACAGAGAAAGGGAGGAAGAAGCCCAAGATTGCAGAAGAAGAGGAGAAAAAATCAGCTGCTACTCCTCGCAATCTATGGAGCGATGACGACCAGCTTGCTCTACTCAAAGGTATTGCTGAATACAAGGCGGTAAAAGGTGTGGAACCTATTGCCGATATGTCTGCTTTTCATGAATTCATCAGGGGGAAGTTGCAGGTTGAAGCTTCAAATAAGAGACTCCGAGACAAGGTAAGGAGGTTAAAGACGAAATATTTGACTAATGTGAAAGATAGTGAGGAGCCAGTTTTCATGAAGGGTCAGGATTATCTAGTTTTTGAGCATTCAAAGAGGATTTGGGGTGCCCCTGGAACTAGTAATGGAGTTAGCACTAATGGCACAGCTAAAATTACTGTTGAGGTTAACAAGAGCTCTGAACCTAAGAGAAGTGCTAAAGTCAGCAAACCCAAGGATGATGAGAAACATAAGGAAGAAGAGAAACAGGTTGCTGTAAAAGAGGTGGTTAAGGAGGATATAGTTAAGGGTGATCAACAGGATTTCCAGTCTGAATTTCCACATTTGACTGCTTCATTTGAAAGTATGGCTGGCATGT</genome_strand>
        <mrna_strand>GAACACTCGAATCGACTGCGAAGTCTAATGCAAAAGGCGAAGACAAGGAATAACGCGATTCCACTTCAAATTCGGATGCTGACCCATCTTCACTTTCAGTATCAGAAGAAGATTAGGGTATGTGTAGAGTTATTAACTGATTTTTGAGTGATAAATCTCTTTTTGACCGAATGATTAATTTTGAATCCTTCACCATTTTTTTCCAAATTCACATCTAATTAAGAACGAGAAATCACACGAAAAAAAGAATTTCCAATTAAAATAACTAATAAGATGTGATTGTTCCGTCCTTCGACCAGTAGTGACTCATAAATTTCACTCGGAATACATGTCTAAATGGGGAAAGTGATTATCCAACTGTAGAAGGGCGCGGCAATCGATTAATACATTCGCTTTTTGTATAAATTGAGAAAAACCCTACACAAAGCTTTCATCTTTTTGACTCTGCTTCAGCACTCACCCATACACATAGCTGATGGCCGAATAGCTCTCTTTTCTTGCTTTCAGAAACAATGGCCCCCAAAACCAAATCCCGCTTAGTAGACCAGCCTCCTTCTGCATCGTCCTCTGAAGAACAAGAATTGGTGGAGGAATCCCAGGAAGAAGAAGAAGAACAATCGAGGGAGGAAGAAGGAGAAGAAGAATCAGGGGAAGAAACTGAAGAACCCAAGACAGCACATCCTGTTGTAAAGAGATCCAGCACTCAGAAACTCCAATTTTCTTCTGATTCCGGCAGCGAGAGTGGGTCAGGATCCGAATCCGGACATTCCCTGCCTTCCCCTTCTGCATTGGACTTCACCATCAAGCCCAGTGTTCCTGCTAAAGCTGCCACCCCATCGAAGCCAGCAGCAAAGAGGCCGCAAGATACCCAGACAGAGAAAGGGAGGAAGAAGCCCAAGATTGCAGAAGAAGAGGAGAAAAAATCAGCTGCTACTCCTCGCAATCTATGGAGCGATGACGACCAGCTTGCTCTACTCAAAGGTATTGCTGAATACAAGGCGGTAAAAGGTGTGGAACCTATTGCCGATATGTCTGCTTTTCATGAATTCATCAGGGGGAAGTTGCAGGTTGAAGCTTCAAATAAGAGACTCCGAGACAAGGTAAGGAGGTTAAAGACGAAATATTTGACTAATGTGAAAGATAGTGAGGAGCCAGTTTTCATGAAGGGTCAGGATTATCTAGTTTTTGAGCATTCAAAGAGGATTTGGGGTGCCCCTGGAACTAGTAATGGAGTTAGCACTAATGGCACAGCTAAAATTACTGTTGAGGTTAACAAGAGCTCTGAACCTAAGAGAAGTGCTAAAGTCAGCAAACCCAAGGATGATGAGAAACATAAGGAAGAAGAGAAACAGGTTGCTGTAAAAGAGGTGGTTAAGGAGGATATAGTTAAGGGTGATCAACAGGATTTCCAGTCTGAATTTCCACATTTGACTGCTTCATTTGAAAGTATGGCTGGCATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLm0137M12-GUJ3m/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U316532" ref_strand="+" ref_description="SGN-U316532        Tomato 200607 #1 [8 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, contains Pfam profile: PF04504 protein of unknown function, DUF573 | chr4:171497-172843 REVERSE | Aliases: A_IG005I10.6, A_IG005I10_6, F5I10.6, F5I10_6(evalue: 3e-21, score=100) genbank/nr: gi|14268476|emb|CAC39398.1| storekeeper protein [Solanum tuberosum](evalue: 4e-109, score=398)">
      <seq>tttttgtctttgcttcatcactcaccatagacaccgacgacggccgaatagctctctcttcttgctttcagaaacaatggcccccaaaaccaaatcccgcttagtagaccaacctccttctgcatcatcttctgaagaacaagaattggtggaggaatgccaggaagaagaagaacaacaacaacaatcgagggaagaaactgaagaagaagaagaacctccagttgtgaagagatccatcactcagaaaccagtcaaaaccgctcagaagctccaattttcttctgagtccgacagcgagaatgggtcaggttccgaatcgaaaaaatcggatcattccccgccttccccttttgtatcagatttcaccattaagccgattgtttctgccccatcgaaatcagcaggaaagaggccgcaagaagcccagaaagagaaagggaggaagaagcccaagattgctgaagaagaggataaaaaatcagctgctactcctcgcagtctatggagcgatgacgaccagcttgctctgctcaaaggtattgctgaatacaagacggtaaaaggcatggaacctaatgcggatatgacagcttttcatgaattcattagaggaaagttgcaggttgaggtttcaaagagtcaactcagtgaaaagataaagaggttaaagaagaaattttttactaatgcggaaggtgatgaggagccagttttcatgaagggtcaggattttttagtttttcagcattcaaagaggatttggggtgcccctggaactagtagtggagttaaggagattgttaccaatagcactaatggcaaagctaaaaagactgttgaggctaagaagagttctgaacctaagaaaagtggtaaagttagcaaacacaaggatgatgaggaacataaggaagaagagaaacaggttgctgttaaagaggtggttaaagaggatatagttaagggtgatcaacaggatttccaatccgaatatccacgtttggctgcatcatttgaaagtatgtctggcatgtttactatttacccaaatggaacaagttttttgaaggaaaagatgagtttgattgctcctgacaaggctaaagtattggaggagaagtggaagaaactggaggatgatgaagctgccttgatggtgaagcgcttagatttgattgcggagcattacagattggtggttgatgcaatgagaggtaactagatgctgatggatgatgtttctatttcgaaccgacaagttctgatactgttttggtggacttttagattttgtttcatgtagtcttgtttctcaaggcaatttcttctcgcgttgatgtactaatgtttagtcggcgaggtagatttagtttttcaggttgattcatacattttattgcttctttagttttactagtgaactgtttggatgatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLm0137M12-GUJ3m/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07SLm0137M12.2" temp_strand="+" temp_description="C07SLm0137M12.2  AC212659.2 htgs_phase:2 submitted_to_sgn_as:gi|205277517|gb|AC212659.2| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07SLm0137M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces">
        <position start="136088" stop="138126"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="136388" g_stop="137826" g_length="1439"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1439" r_length="1439" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLm0137M12.2" gen_strand="+" ref_id="SGN-U316532" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1439</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLm0137M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U316532" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="136388" e_stop="137826"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTGTCTTTGCTTCATCACTCACCATAGACACCGACGACGGCCGAATAGCTCTCTCTTCTTGCTTTCAGAAACAATGGCCCCCAAAACCAAATCCCGCTTAGTAGACCAACCTCCTTCTGCATCATCTTCTGAAGAACAAGAATTGGTGGAGGAATGCCAGGAAGAAGAAGAACAACAACAACAATCGAGGGAAGAAACTGAAGAAGAAGAAGAACCTCCAGTTGTGAAGAGATCCATCACTCAGAAACCAGTCAAAACCGCTCAGAAGCTCCAATTTTCTTCTGAGTCCGACAGCGAGAATGGGTCAGGTTCCGAATCGAAAAAATCGGATCATTCCCCGCCTTCCCCTTTTGTATCAGATTTCACCATTAAGCCGATTGTTTCTGCCCCATCGAAATCAGCAGGAAAGAGGCCGCAAGAAGCCCAGAAAGAGAAAGGGAGGAAGAAGCCCAAGATTGCTGAAGAAGAGGATAAAAAATCAGCTGCTACTCCTCGCAGTCTATGGAGCGATGACGACCAGCTTGCTCTGCTCAAAGGTATTGCTGAATACAAGACGGTAAAAGGCATGGAACCTAATGCGGATATGACAGCTTTTCATGAATTCATTAGAGGAAAGTTGCAGGTTGAGGTTTCAAAGAGTCAACTCAGTGAAAAGATAAAGAGGTTAAAGAAGAAATTTTTTACTAATGCGAAAGGTGATGAGGAGCCAGTTTTCATGAAGGGTCAGGATTTTTTAGTTTTTCAGCATTCAAAGAGGATTTGGGGTGCCCCTGGAACTAGTAGTGGAGTTAAGGAGATTGTTACCAATAGCACTAATGGCAAAGCTAAAAAGACTGTTGAGGCTAAGAAGAGTTCTGAACCTAAGAAAAGTGGTAAAGTTAGCAAACACAAGGATGATGAGGAACATAAGGAAGAAGAGAAACAGGTTGCTGTTAAAGAGGTGGTTAAAGAGGATATAGTTAAGGGTGATCAACAGGATTTCCAATCCGAATATCCACGTTTGGCTGCATCATTTGAAAGTATGTCTGGCATGTTTACTATTTACCCAAATGGAACAAGTTTTTTGAAGGAAAAGATGAGTTTGATTGCTCCTGACAAGGCTAAAGTATTGGAGGAGAAGTGGAAGAAACTGGAGGATGATGAAGCTGCCTTGATGGTGAAGCGCTTAGATTTGATTGCGGAGCATTACAGATTGGTGGTTGATGCAATGAGAGGTAACTAGATGCTGATGGATGATGTTTCTATTTCGAACCGACAAGTTCTGATACTGTTTTGGTGGACTTTTAGATTTTGTTTCATGTAGTCTTGTTTCTCAAGGCAATTTCTTCTCGCGTTGATGTACTAATGTTTAGTCGGCGAGGTAGATTTAGTTTTTCAGGTTGATTCATACATTTTATTGCTTCTTTAGTTTTACTAGTGAACTGTTTGGATGATGA</genome_strand>
        <mrna_strand>TTTTTGTCTTTGCTTCATCACTCACCATAGACACCGACGACGGCCGAATAGCTCTCTCTTCTTGCTTTCAGAAACAATGGCCCCCAAAACCAAATCCCGCTTAGTAGACCAACCTCCTTCTGCATCATCTTCTGAAGAACAAGAATTGGTGGAGGAATGCCAGGAAGAAGAAGAACAACAACAACAATCGAGGGAAGAAACTGAAGAAGAAGAAGAACCTCCAGTTGTGAAGAGATCCATCACTCAGAAACCAGTCAAAACCGCTCAGAAGCTCCAATTTTCTTCTGAGTCCGACAGCGAGAATGGGTCAGGTTCCGAATCGAAAAAATCGGATCATTCCCCGCCTTCCCCTTTTGTATCAGATTTCACCATTAAGCCGATTGTTTCTGCCCCATCGAAATCAGCAGGAAAGAGGCCGCAAGAAGCCCAGAAAGAGAAAGGGAGGAAGAAGCCCAAGATTGCTGAAGAAGAGGATAAAAAATCAGCTGCTACTCCTCGCAGTCTATGGAGCGATGACGACCAGCTTGCTCTGCTCAAAGGTATTGCTGAATACAAGACGGTAAAAGGCATGGAACCTAATGCGGATATGACAGCTTTTCATGAATTCATTAGAGGAAAGTTGCAGGTTGAGGTTTCAAAGAGTCAACTCAGTGAAAAGATAAAGAGGTTAAAGAAGAAATTTTTTACTAATGCGGAAGGTGATGAGGAGCCAGTTTTCATGAAGGGTCAGGATTTTTTAGTTTTTCAGCATTCAAAGAGGATTTGGGGTGCCCCTGGAACTAGTAGTGGAGTTAAGGAGATTGTTACCAATAGCACTAATGGCAAAGCTAAAAAGACTGTTGAGGCTAAGAAGAGTTCTGAACCTAAGAAAAGTGGTAAAGTTAGCAAACACAAGGATGATGAGGAACATAAGGAAGAAGAGAAACAGGTTGCTGTTAAAGAGGTGGTTAAAGAGGATATAGTTAAGGGTGATCAACAGGATTTCCAATCCGAATATCCACGTTTGGCTGCATCATTTGAAAGTATGTCTGGCATGTTTACTATTTACCCAAATGGAACAAGTTTTTTGAAGGAAAAGATGAGTTTGATTGCTCCTGACAAGGCTAAAGTATTGGAGGAGAAGTGGAAGAAACTGGAGGATGATGAAGCTGCCTTGATGGTGAAGCGCTTAGATTTGATTGCGGAGCATTACAGATTGGTGGTTGATGCAATGAGAGGTAACTAGATGCTGATGGATGATGTTTCTATTTCGAACCGACAAGTTCTGATACTGTTTTGGTGGACTTTTAGATTTTGTTTCATGTAGTCTTGTTTCTCAAGGCAATTTCTTCTCGCGTTGATGTACTAATGTTTAGTCGGCGAGGTAGATTTAGTTTTTCAGGTTGATTCATACATTTTATTGCTTCTTTAGTTTTACTAGTGAACTGTTTGGATGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>15</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="4127" PGL_stop="3949"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="4127" e_stop="3949"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="4127" e_stop="3949" e_length="179"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4127" stop="3949"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335343" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCCTCGAAGGCTGCGATTCGCTGTCCCTATTTGTCAATTTCATATTTATTTCCATCAAAAACTTGGACTACAAAGTCACGGTGGAGACCGCCGGAAAAGCTGAAAGCTCGATTCATCGGTCACCGGAAACTCAACCGACGAAGACAACTAGGAGGAGGTGGAGGAGCCAAATTTGCTGA</gDNA_template>
            <first_frame> S  S  K  A  A  I  R  C  P  Y  L  S  I  S  Y  L  F  P  S  K  T  W  T  T  K  S  R  W  R  P  P  E  K  L  K  A  R  F  I  G  H  R  K  L  N  R  R  R  Q  L  G  G  G  G  G  A  K  F  A   </first_frame>
            <second_frame>  P  R  R  L  R  F  A  V  P  I  C  Q  F  H  I  Y  F  H  Q  K  L  G  L  Q  S  H  G  G  D  R  R  K  S  *  K  L  D  S  S  V  T  G  N  S  T  D  E  D  N  *  E  E  V  E  E  P  N  L  L  </second_frame>
            <third_frame>   L  E  G  C  D  S  L  S  L  F  V  N  F  I  F  I  S  I  K  N  L  D  Y  K  V  T  V  E  T  A  G  K  A  E  S  S  I  H  R  S  P  E  T  Q  P  T  K  T  T  R  R  R  W  R  S  Q  I  C  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07SLm0137M12.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="6395" PGL_stop="4925"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="6395" e_stop="5935"/>
            <exon e_start="5310" e_stop="4925"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.993" e_score="0.998"/>
          <exon-only e_score="0.977"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="6395" e_stop="5935" e_length="461"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.993">
            <gDNA_intron_boundary i_start="5934" i_stop="5311" i_length="624"/>
          </intron>
          <exon e_serial="2" e_score="0.977">
            <gDNA_exon_boundary e_start="5310" e_stop="4925" e_length="386"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6395" stop="5935"/>
              <exon start="5310" stop="4925"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U326092" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAAACATCAGTTCCATTAATTTAGATGCTTCACGAGGGTGGCAGTGACGAATTCCACCGCCGGCCGGACCCGAGCGCGGACGATGTAGCCACCCCTCGGGTCCTAACCATCTTGTCGTATGTGCTCGAAAAGCTCGTAGCAAGGAATGATCAATTGTTATTATTAGGCCGCCAGGTTGGTCATGATAATGAACTCATGAGCAACGGGGCAGGCGGCCCACGGAGGGTACTAGGGAAGAATTTTAATGCGTTTCATGGGGTTCGAGCGCCGAATATAAGTATACCCAAGTATTTAGAGAGGTTATATAAGTATACGAATTGTAGCCCGTCTTGTTTTGTGGTGGGATATGTGTATATTGATAGATTGGGGCATAAGTATCCAGATTCTCTATTGGTTTCTTTGAATGTGCATAGGCTGCTTGTTACTAGTGTTATGGTTGCTTCCAAAATGCTCGATGATGC : ACACTATAACAATGCATTCTATGCCCGAGTTGGAGGAGTAAGCAATGCGGAATTAAACAAGTTGGAGTTGGAGCTACTTTTCTTGTTAGATTTTGGAGTAAATATGAGTGCACGAGTTTTCGAAAGTTATTGCCAGTATTTGGAGAGGGAAATGTTGAGCAATGGACCAACCCTCAAGATTGAAAAGTCAGCTATTAATAGCATTACTACTAGTACTGTAGATGATGCCACTGAAATTTCAGTAGAAGACATTGATCATACTTCTTCACCATCACAATTGTTAGATTAAATTTACGTGACAACAATAAATTCTAATGAAATTATTCAATAAAATGTAAAAGTACTTGTCTCTATGTTACTCTTTCTATATTCGTATAGCTGATCTT</gDNA_template>
            <first_frame> Q  T  S  V  P  L  I  *  M  L  H  E  G  G  S  D  E  F  H  R  R  P  D  P  S  A  D  D  V  A  T  P  R  V  L  T  I  L  S  Y  V  L  E  K  L  V  A  R  N  D  Q  L  L  L  L  G  R  Q  V  G  H  D  N  E  L  M  S  N  G  A  G  G  P  R  R  V  L  G  K  N  F  N  A  F  H  G  V  R  A  P  N  I  S  I  P  K  Y  L  E  R  L  Y  K  Y  T  N  C  S  P  S  C  F  V  V  G  Y  V  Y  I  D  R  L  G  H  K  Y  P  D  S  L  L  V  S  L  N  V  H  R  L  L  V  T  S  V  M  V  A  S  K  M  L  D  D  A :   H  Y  N  N  A  F  Y  A  R  V  G  G  V  S  N  A  E  L  N  K  L  E  L  E  L  L  F  L  L  D  F  G  V  N  M  S  A  R  V  F  E  S  Y  C  Q  Y  L  E  R  E  M  L  S  N  G  P  T  L  K  I  E  K  S  A  I  N  S  I  T  T  S  T  V  D  D  A  T  E  I  S  V  E  D  I  D  H  T  S  S  P  S  Q  L  L  D  *  I  Y  V  T  T  I  N  S  N  E  I  I  Q  *  N  V  K  V  L  V  S  M  L  L  F  L  Y  S  Y  S  *  S  </first_frame>
            <second_frame>  K  H  Q  F  H  *  F  R  C  F  T  R  V  A  V  T  N  S  T  A  G  R  T  R  A  R  T  M  *  P  P  L  G  S  *  P  S  C  R  M  C  S  K  S  S  *  Q  G  M  I  N  C  Y  Y  *  A  A  R  L  V  M  I  M  N  S  *  A  T  G  Q  A  A  H  G  G  Y  *  G  R  I  L  M  R  F  M  G  F  E  R  R  I  *  V  Y  P  S  I  *  R  G  Y  I  S  I  R  I  V  A  R  L  V  L  W  W  D  M  C  I  L  I  D  W  G  I  S  I  Q  I  L  Y  W  F  L  *  M  C  I  G  C  L  L  L  V  L  W  L  L  P  K  C  S  M  M   : H  T  I  T  M  H  S  M  P  E  L  E  E  *  A  M  R  N  *  T  S  W  S  W  S  Y  F  S  C  *  I  L  E  *  I  *  V  H  E  F  S  K  V  I  A  S  I  W  R  G  K  C  *  A  M  D  Q  P  S  R  L  K  S  Q  L  L  I  A  L  L  L  V  L  *  M  M  P  L  K  F  Q  *  K  T  L  I  I  L  L  H  H  H  N  C  *  I  K  F  T  *  Q  Q  *  I  L  M  K  L  F  N  K  M  *  K  Y  L  S  L  C  Y  S  F  Y  I  R  I  A  D  L </second_frame>
            <third_frame>   N  I  S  S  I  N  L  D  A  S  R  G  W  Q  *  R  I  P  P  P  A  G  P  E  R  G  R  C  S  H  P  S  G  P  N  H  L  V  V  C  A  R  K  A  R  S  K  E  *  S  I  V  I  I  R  P  P  G  W  S  *  *  *  T  H  E  Q  R  G  R  R  P  T  E  G  T  R  E  E  F  *  C  V  S  W  G  S  S  A  E  Y  K  Y  T  Q  V  F  R  E  V  I  *  V  Y  E  L  *  P  V  L  F  C  G  G  I  C  V  Y  *  *  I  G  A  *  V  S  R  F  S  I  G  F  F  E  C  A  *  A  A  C  Y  *  C  Y  G  C  F  Q  N  A  R  *  C  :  T  L  *  Q  C  I  L  C  P  S  W  R  S  K  Q  C  G  I  K  Q  V  G  V  G  A  T  F  L  V  R  F  W  S  K  Y  E  C  T  S  F  R  K  L  L  P  V  F  G  E  G  N  V  E  Q  W  T  N  P  Q  D  *  K  V  S  Y  *  *  H  Y  Y  *  Y  C  R  *  C  H  *  N  F  S  R  R  H  *  S  Y  F  F  T  I  T  I  V  R  L  N  L  R  D  N  N  K  F  *  *  N  Y  S  I  K  C  K  S  T  C  L  Y  V  T  L  S  I  F  V  *  L  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="6371" stop="5935"/>
                    <exon start="5310" stop="5022"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>723</number_coding_nucleotides>
                  <number_encoded_amino_acids>241</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MLHEGGSDEFHRRPDPSADDVATPRVLTILSYVLEKLVARNDQLLLLGRQVGHDNELMSNGAGGPRRVLGKNFNAFHGVRAPNISIPKYLERLYKYTNCSPSCFVVGYVYIDRLGHKYPDSLLVSLNVHRLLVTSVMVASKMLDDAHYNNAFYARVGGVSNAELNKLELELLFLLDFGVNMSARVFESYCQYLEREMLSNGPTLKIEKSAINSITTSTVDDATEISVEDIDHTSSPSQLLD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="29688" PGL_stop="31736"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="29688" e_stop="30471"/>
            <exon e_start="31330" e_stop="31736"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.951" acc_prob="0.997" e_score="0.984"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.984">
            <gDNA_exon_boundary e_start="29688" e_stop="30471" e_length="784"/>
          </exon>
          <intron i_serial="1" don_prob="0.951" acc_prob="0.997">
            <gDNA_intron_boundary i_start="30472" i_stop="31329" i_length="858"/>
          </intron>
          <exon e_serial="2" e_score="0.993">
            <gDNA_exon_boundary e_start="31330" e_stop="31736" e_length="407"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29688" stop="30199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U332164" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30172" stop="30471"/>
              <exon start="31330" stop="31736"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U327851" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATGCCTATGGTTCCAAGATTCATTCATACACAAAATCGTCTCAAAGATCTTCTCTTAATCTTCTCCACACTTGTTATCTTCTACCTCATCTTCCTTCTTCATCACATCCAGACCCCCAAAACTTCCTTCAATCCAAATCCCAATTTCTCCAAAACCCTTTCAACTTCCACTAATCTTTCAATCTCACACCTCTTCTTCTCAATTGCCGCTTCTTCTTCCTCTTTCTCTAACCGTCTCTCTTACATTAACCTCTGGTACAAACCCAATTCCACAAACGCCGTCGTTTTCCTTGACGACCCGATTTCCATTTCTACCCTCTCTGTTTCATCACCCCCAATTCTTGTTTCATCGGATACTTCTAAGTTTCCTTATTCATTCCCGGCGGGCCGTCGTTCGGCGATTCGGATTGCTCGTATTGTTAAAGATACTTTTGATTTGGTTAAAAATGTGAACTTTAATGATACCCGTTGGTTTGTTTTTGGGGATGATGATACTGTTTTCTTTACGGATAATTTGGTTAGAGTTTTGTCGAAATATGATTGTGAGAAGTGGTATTATGTTGGGTATAATTCGGAGAGTTTTGAGCAAAATGAGAAGTATTCATTTGATATGGCATTTGGAGGGGGTGGGTTTGCACTTAGTGCTCCATTGGCTAAGGTTTTAGCTAGGGTTTTGGATTCTTGTTTGATTAGGTACCCTCATTTGTATGGAAGTGATTCCAGGATTTTTTCTTGTGTAGCTGAGCTCGGAGTACATTTGACTCATGAACCTGGATTCCACCAG : GTTGATGTCCGAGGAAATCTGTTTGGTATCCTTGCTGCACATCCATTATCACCTTTGTTATCACTTCATCACTTGGACGTCGTGGAGCCACTTTTTCCTGGCATGACTAGGATTCAAGCAGTGGACCATCTTTTCCAAGCTGTCCATGCTGATCCAGCTAGGATTTTGGAACAAACTGTGTGCTATGACAAGTCCAATTTACTGACCGTTTCAGTTGCATGGGGTTATGCCGTTCAGGTGTTTGAAGGGAATCAACTTCTTCCAGATCTTCTCTCGCTGCAGCGAACATTTACACCATGGAAAAGGGGTAAAAATGTTTCTGCAAGCTATATGCTCAACACTAGAGTCAATCCTAGTGATCCATGCAAAAAACCTGATGTCTTCTTCTTGAAAAAGGTGCTTTCTAG</gDNA_template>
            <first_frame> N  A  Y  G  S  K  I  H  S  Y  T  K  S  S  Q  R  S  S  L  N  L  L  H  T  C  Y  L  L  P  H  L  P  S  S  S  H  P  D  P  Q  N  F  L  Q  S  K  S  Q  F  L  Q  N  P  F  N  F  H  *  S  F  N  L  T  P  L  L  L  N  C  R  F  F  F  L  F  L  *  P  S  L  L  H  *  P  L  V  Q  T  Q  F  H  K  R  R  R  F  P  *  R  P  D  F  H  F  Y  P  L  C  F  I  T  P  N  S  C  F  I  G  Y  F  *  V  S  L  F  I  P  G  G  P  S  F  G  D  S  D  C  S  Y  C  *  R  Y  F  *  F  G  *  K  C  E  L  *  *  Y  P  L  V  C  F  W  G  *  *  Y  C  F  L  Y  G  *  F  G  *  S  F  V  E  I  *  L  *  E  V  V  L  C  W  V  *  F  G  E  F  *  A  K  *  E  V  F  I  *  Y  G  I  W  R  G  W  V  C  T  *  C  S  I  G  *  G  F  S  *  G  F  G  F  L  F  D  *  V  P  S  F  V  W  K  *  F  Q  D  F  F  L  C  S  *  A  R  S  T  F  D  S  *  T  W  I  P  P   : G  *  C  P  R  K  S  V  W  Y  P  C  C  T  S  I  I  T  F  V  I  T  S  S  L  G  R  R  G  A  T  F  S  W  H  D  *  D  S  S  S  G  P  S  F  P  S  C  P  C  *  S  S  *  D  F  G  T  N  C  V  L  *  Q  V  Q  F  T  D  R  F  S  C  M  G  L  C  R  S  G  V  *  R  E  S  T  S  S  R  S  S  L  A  A  A  N  I  Y  T  M  E  K  G  *  K  C  F  C  K  L  Y  A  Q  H  *  S  Q  S  *  *  S  M  Q  K  T  *  C  L  L  L  E  K  G  A  F  * </first_frame>
            <second_frame>  M  P  M  V  P  R  F  I  H  T  Q  N  R  L  K  D  L  L  L  I  F  S  T  L  V  I  F  Y  L  I  F  L  L  H  H  I  Q  T  P  K  T  S  F  N  P  N  P  N  F  S  K  T  L  S  T  S  T  N  L  S  I  S  H  L  F  F  S  I  A  A  S  S  S  S  F  S  N  R  L  S  Y  I  N  L  W  Y  K  P  N  S  T  N  A  V  V  F  L  D  D  P  I  S  I  S  T  L  S  V  S  S  P  P  I  L  V  S  S  D  T  S  K  F  P  Y  S  F  P  A  G  R  R  S  A  I  R  I  A  R  I  V  K  D  T  F  D  L  V  K  N  V  N  F  N  D  T  R  W  F  V  F  G  D  D  D  T  V  F  F  T  D  N  L  V  R  V  L  S  K  Y  D  C  E  K  W  Y  Y  V  G  Y  N  S  E  S  F  E  Q  N  E  K  Y  S  F  D  M  A  F  G  G  G  G  F  A  L  S  A  P  L  A  K  V  L  A  R  V  L  D  S  C  L  I  R  Y  P  H  L  Y  G  S  D  S  R  I  F  S  C  V  A  E  L  G  V  H  L  T  H  E  P  G  F  H  Q  :  V  D  V  R  G  N  L  F  G  I  L  A  A  H  P  L  S  P  L  L  S  L  H  H  L  D  V  V  E  P  L  F  P  G  M  T  R  I  Q  A  V  D  H  L  F  Q  A  V  H  A  D  P  A  R  I  L  E  Q  T  V  C  Y  D  K  S  N  L  L  T  V  S  V  A  W  G  Y  A  V  Q  V  F  E  G  N  Q  L  L  P  D  L  L  S  L  Q  R  T  F  T  P  W  K  R  G  K  N  V  S  A  S  Y  M  L  N  T  R  V  N  P  S  D  P  C  K  K  P  D  V  F  F  L  K  K  V  L  S   </second_frame>
            <third_frame>   C  L  W  F  Q  D  S  F  I  H  K  I  V  S  K  I  F  S  *  S  S  P  H  L  L  S  S  T  S  S  S  F  F  I  T  S  R  P  P  K  L  P  S  I  Q  I  P  I  S  P  K  P  F  Q  L  P  L  I  F  Q  S  H  T  S  S  S  Q  L  P  L  L  L  P  L  S  L  T  V  S  L  T  L  T  S  G  T  N  P  I  P  Q  T  P  S  F  S  L  T  T  R  F  P  F  L  P  S  L  F  H  H  P  Q  F  L  F  H  R  I  L  L  S  F  L  I  H  S  R  R  A  V  V  R  R  F  G  L  L  V  L  L  K  I  L  L  I  W  L  K  M  *  T  L  M  I  P  V  G  L  F  L  G  M  M  I  L  F  S  L  R  I  I  W  L  E  F  C  R  N  M  I  V  R  S  G  I  M  L  G  I  I  R  R  V  L  S  K  M  R  S  I  H  L  I  W  H  L  E  G  V  G  L  H  L  V  L  H  W  L  R  F  *  L  G  F  W  I  L  V  *  L  G  T  L  I  C  M  E  V  I  P  G  F  F  L  V  *  L  S  S  E  Y  I  *  L  M  N  L  D  S  T  R :   L  M  S  E  E  I  C  L  V  S  L  L  H  I  H  Y  H  L  C  Y  H  F  I  T  W  T  S  W  S  H  F  F  L  A  *  L  G  F  K  Q  W  T  I  F  S  K  L  S  M  L  I  Q  L  G  F  W  N  K  L  C  A  M  T  S  P  I  Y  *  P  F  Q  L  H  G  V  M  P  F  R  C  L  K  G  I  N  F  F  Q  I  F  S  R  C  S  E  H  L  H  H  G  K  G  V  K  M  F  L  Q  A  I  C  S  T  L  E  S  I  L  V  I  H  A  K  N  L  M  S  S  S  *  K  R  C  F  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29689" stop="30471"/>
                    <exon start="31330" stop="31734"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1188</number_coding_nucleotides>
                  <number_encoded_amino_acids>396</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MPMVPRFIHTQNRLKDLLLIFSTLVIFYLIFLLHHIQTPKTSFNPNPNFSKTLSTSTNLSISHLFFSIAASSSSFSNRLSYINLWYKPNSTNAVVFLDDPISISTLSVSSPPILVSSDTSKFPYSFPAGRRSAIRIARIVKDTFDLVKNVNFNDTRWFVFGDDDTVFFTDNLVRVLSKYDCEKWYYVGYNSESFEQNEKYSFDMAFGGGGFALSAPLAKVLARVLDSCLIRYPHLYGSDSRIFSCVAELGVHLTHEPGFHQVDVRGNLFGILAAHPLSPLLSLHHLDVVEPLFPGMTRIQAVDHLFQAVHADPARILEQTVCYDKSNLLTVSVAWGYAVQVFEGNQLLPDLLSLQRTFTPWKRGKNVSASYMLNTRVNPSDPCKKPDVFFLKKVLS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="40729" PGL_stop="41171"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="40729" e_stop="41171"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.935"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.935">
            <gDNA_exon_boundary e_start="40729" e_stop="41171" e_length="443"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40729" stop="41171"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U344226" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTATTGTAGATGACCAAATTTTTTCTTCGAATACGAAATTAAATTACAATATACACACAAAAAATAGTTTATTTTTTTTTATTTAAACTAAGGAATGAAAGAAAAAAAACAAAATAAGAATAAGAAACTCAAATAATTATAATAAAAGAAGTCAAAAAATAATTTTTGTATGAAAAAAATTAAAATATACCTTGAACTTTGATAGAAGAATCATATATACCCCTAAATAATTTTTTTTTTAAAAATAGAAGTAACAAATATAAATTTAAAACTAATTTTTTAACTTCCGTTAAATGAAGGGTATATGTGAGCCATTTTGTAACGGCAGGGGTATATGTGAGCCGTTTGTATAACGATAAGGGCATATATGAGCCACTTTTATAACGAGGGGTATATCAGCTCTAAATGACAAAGTTGAGGAGTACATCAGACCCTTTTATTTA</gDNA_template>
            <first_frame> L  L  *  M  T  K  F  F  L  R  I  R  N  *  I  T  I  Y  T  Q  K  I  V  Y  F  F  L  F  K  L  R  N  E  R  K  K  T  K  *  E  *  E  T  Q  I  I  I  I  K  E  V  K  K  *  F  L  Y  E  K  N  *  N  I  P  *  T  L  I  E  E  S  Y  I  P  L  N  N  F  F  F  K  N  R  S  N  K  Y  K  F  K  T  N  F  L  T  S  V  K  *  R  V  Y  V  S  H  F  V  T  A  G  V  Y  V  S  R  L  Y  N  D  K  G  I  Y  E  P  L  L  *  R  G  V  Y  Q  L  *  M  T  K  L  R  S  T  S  D  P  F  I   </first_frame>
            <second_frame>  Y  C  R  *  P  N  F  F  F  E  Y  E  I  K  L  Q  Y  T  H  K  K  *  F  I  F  F  Y  L  N  *  G  M  K  E  K  K  Q  N  K  N  K  K  L  K  *  L  *  *  K  K  S  K  N  N  F  C  M  K  K  I  K  I  Y  L  E  L  *  *  K  N  H  I  Y  P  *  I  I  F  F  L  K  I  E  V  T  N  I  N  L  K  L  I  F  *  L  P  L  N  E  G  Y  M  *  A  I  L  *  R  Q  G  Y  M  *  A  V  C  I  T  I  R  A  Y  M  S  H  F  Y  N  E  G  Y  I  S  S  K  *  Q  S  *  G  V  H  Q  T  L  L  F  </second_frame>
            <third_frame>   I  V  D  D  Q  I  F  S  S  N  T  K  L  N  Y  N  I  H  T  K  N  S  L  F  F  F  I  *  T  K  E  *  K  K  K  N  K  I  R  I  R  N  S  N  N  Y  N  K  R  S  Q  K  I  I  F  V  *  K  K  L  K  Y  T  L  N  F  D  R  R  I  I  Y  T  P  K  *  F  F  F  *  K  *  K  *  Q  I  *  I  *  N  *  F  F  N  F  R  *  M  K  G  I  C  E  P  F  C  N  G  R  G  I  C  E  P  F  V  *  R  *  G  H  I  *  A  T  F  I  T  R  G  I  S  A  L  N  D  K  V  E  E  Y  I  R  P  F  Y  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07SLm0137M12.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="48099" PGL_stop="43859"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="48099" e_stop="47880"/>
            <exon e_start="46829" e_stop="46767"/>
            <exon e_start="44827" e_stop="44750"/>
            <exon e_start="44666" e_stop="44504"/>
            <exon e_start="44384" e_stop="43859"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.657" e_score="1.000"/>
          <exon-intron don_prob="0.964" acc_prob="0.679" e_score="1.000"/>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="48099" e_stop="47880" e_length="220"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.991">
            <gDNA_intron_boundary i_start="47879" i_stop="46830" i_length="1050"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="46829" e_stop="46767" e_length="63"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.997">
            <gDNA_intron_boundary i_start="46766" i_stop="44828" i_length="1939"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="44827" e_stop="44750" e_length="78"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.657">
            <gDNA_intron_boundary i_start="44749" i_stop="44667" i_length="83"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="44666" e_stop="44504" e_length="163"/>
          </exon>
          <intron i_serial="4" don_prob="0.964" acc_prob="0.679">
            <gDNA_intron_boundary i_start="44503" i_stop="44385" i_length="119"/>
          </intron>
          <exon e_serial="5" e_score="0.987">
            <gDNA_exon_boundary e_start="44384" e_stop="43859" e_length="526"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48099" stop="47880"/>
              <exon start="46829" stop="46767"/>
              <exon start="44827" stop="44750"/>
              <exon start="44666" stop="44504"/>
              <exon start="44384" stop="43859"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U319630" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGGTTTTGTAGTGTGCAGAGCAAAAGGGAAGGGGGAAATTTGAAGAAGGGAATTAGGTCATGGAGGTCGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATGACGGATATTACTTCTGCTGCATCTGTTACCGTCGCTGAGTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACGATCTATGCTTCTTCTAATCTCAT : TACTGAAACAGATTACACATTTGCGGATTCAGAAGTTAGCAAGGAGGCAAGCTCACGAAAGCG : GTTAAAAAGTGAATGTTGCAGCTCTCCGAGATCTAAGGCATGCAGAGAGAAATTGCGGAGGGACAGACTGAATGAGAG : GTTCCTCGCATTGAGCTCTGTCCTTGATCCTGGAAGGCCACCAAAAACTGAGAAAGTTGCAATTCTAAGTGATGCTCAAAGGATGCTGATTGAGCTGCGAACTGAAACCCAGAAGCTGAAGGAGTCAAATGAGGAGCTGCAAGAGAAGATAAAAGAACTTAAG : GCAGAGAAGAATGAGCTCCGAGATGAAAAGCAAAGGCTAAAGGAAGAAAAGGATAATTTGGAGCAGCAGGTTAAAAGCTTAGCTTCTAAAGCAGGATTTCTCTCCCATCCTTCTGCCATGGGAGCTGCATTTACTGCACAAGGACAAGTTGCTGCAGGCAACAAATTGATGCCTTTCATTGGTTATCCCAGTGTTGCGATGTGGCAATTCATGCAACCTGCTGTTGTTGACACATCTCAAGATCATGTGCTCCGTCCTCCAGTTGCTTAAGCTGGATTTGCCAGGTGACTTGCTACTGGAGCTTTGCTCTTTTTGTTGCTCCTGTGAGTGCTAAAAGTGACAAACAACTGAGACAATTTGCTGGTTGTATTTGTATGTCTAGCTTTTATGTATGTGTCAGTCTTGATGGTTTGCTTAATCATGTATATGGCGGGTGTATACTCACCCGAAAAACAATTATGTATTATGATTCCCTAGATGGGATTCCTTCTGAAATAATTAAACTTGGTTGTATGCACATTATACC</gDNA_template>
            <first_frame> W  F  C  S  V  Q  S  K  R  E  G  G  N  L  K  K  G  I  R  S  W  R  S  I  L  V  G  I  L  I  G  Y  L  I  M  S  *  *  R  I  L  L  L  L  H  L  L  P  S  L  S  F  S  L  R  L  L  L  I  S  A  G  L  L  K  R  S  M  L  L  L  I  S   : L  L  K  Q  I  T  H  L  R  I  Q  K  L  A  R  R  Q  A  H  E  S   : G  *  K  V  N  V  A  A  L  R  D  L  R  H  A  E  R  N  C  G  G  T  D  *  M  R   : G  S  S  H  *  A  L  S  L  I  L  E  G  H  Q  K  L  R  K  L  Q  F  *  V  M  L  K  G  C  *  L  S  C  E  L  K  P  R  S  *  R  S  Q  M  R  S  C  K  R  R  *  K  N  L  R :   Q  R  R  M  S  S  E  M  K  S  K  G  *  R  K  K  R  I  I  W  S  S  R  L  K  A  *  L  L  K  Q  D  F  S  P  I  L  L  P  W  E  L  H  L  L  H  K  D  K  L  L  Q  A  T  N  *  C  L  S  L  V  I  P  V  L  R  C  G  N  S  C  N  L  L  L  L  T  H  L  K  I  M  C  S  V  L  Q  L  L  K  L  D  L  P  G  D  L  L  L  E  L  C  S  F  C  C  S  C  E  C  *  K  *  Q  T  T  E  T  I  C  W  L  Y  L  Y  V  *  L  L  C  M  C  Q  S  *  W  F  A  *  S  C  I  W  R  V  Y  T  H  P  K  N  N  Y  V  L  *  F  P  R  W  D  S  F  *  N  N  *  T  W  L  Y  A  H  Y  T </first_frame>
            <second_frame>  G  F  V  V  C  R  A  K  G  K  G  E  I  *  R  R  E  L  G  H  G  G  R  F  *  W  E  S  *  L  V  I  *  L  *  V  D  D  G  Y  Y  F  C  C  I  C  Y  R  R  *  V  S  V  S  G  Y  Y  *  F  Q  L  A  C  S  N  D  L  C  F  F  *  S  H  :  Y  *  N  R  L  H  I  C  G  F  R  S  *  Q  G  G  K  L  T  K  A  :  V  K  K  *  M  L  Q  L  S  E  I  *  G  M  Q  R  E  I  A  E  G  Q  T  E  *  E  :  V  P  R  I  E  L  C  P  *  S  W  K  A  T  K  N  *  E  S  C  N  S  K  *  C  S  K  D  A  D  *  A  A  N  *  N  P  E  A  E  G  V  K  *  G  A  A  R  E  D  K  R  T  *   : G  R  E  E  *  A  P  R  *  K  A  K  A  K  G  R  K  G  *  F  G  A  A  G  *  K  L  S  F  *  S  R  I  S  L  P  S  F  C  H  G  S  C  I  Y  C  T  R  T  S  C  C  R  Q  Q  I  D  A  F  H  W  L  S  Q  C  C  D  V  A  I  H  A  T  C  C  C  *  H  I  S  R  S  C  A  P  S  S  S  C  L  S  W  I  C  Q  V  T  C  Y  W  S  F  A  L  F  V  A  P  V  S  A  K  S  D  K  Q  L  R  Q  F  A  G  C  I  C  M  S  S  F  Y  V  C  V  S  L  D  G  L  L  N  H  V  Y  G  G  C  I  L  T  R  K  T  I  M  Y  Y  D  S  L  D  G  I  P  S  E  I  I  K  L  G  C  M  H  I  I   </second_frame>
            <third_frame>   V  L  *  C  A  E  Q  K  G  R  G  K  F  E  E  G  N  *  V  M  E  V  D  S  S  G  N  P  N  W  L  F  D  Y  E  L  M  T  D  I  T  S  A  A  S  V  T  V  A  E  F  Q  S  P  A  T  I  D  F  S  W  P  A  Q  T  I  Y  A  S  S  N  L  I :   T  E  T  D  Y  T  F  A  D  S  E  V  S  K  E  A  S  S  R  K  R :   L  K  S  E  C  C  S  S  P  R  S  K  A  C  R  E  K  L  R  R  D  R  L  N  E  R :   F  L  A  L  S  S  V  L  D  P  G  R  P  P  K  T  E  K  V  A  I  L  S  D  A  Q  R  M  L  I  E  L  R  T  E  T  Q  K  L  K  E  S  N  E  E  L  Q  E  K  I  K  E  L  K  :  A  E  K  N  E  L  R  D  E  K  Q  R  L  K  E  E  K  D  N  L  E  Q  Q  V  K  S  L  A  S  K  A  G  F  L  S  H  P  S  A  M  G  A  A  F  T  A  Q  G  Q  V  A  A  G  N  K  L  M  P  F  I  G  Y  P  S  V  A  M  W  Q  F  M  Q  P  A  V  V  D  T  S  Q  D  H  V  L  R  P  P  V  A  *  A  G  F  A  R  *  L  A  T  G  A  L  L  F  L  L  L  L  *  V  L  K  V  T  N  N  *  D  N  L  L  V  V  F  V  C  L  A  F  M  Y  V  S  V  L  M  V  C  L  I  M  Y  M  A  G  V  Y  S  P  E  K  Q  L  C  I  M  I  P  *  M  G  F  L  L  K  *  L  N  L  V  V  C  T  L  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="48043" stop="47880"/>
                    <exon start="46829" stop="46767"/>
                    <exon start="44827" stop="44750"/>
                    <exon start="44666" stop="44504"/>
                    <exon start="44384" stop="44115"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>735</number_coding_nucleotides>
                  <number_encoded_amino_acids>245</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VMEVDSSGNPNWLFDYELMTDITSAASVTVAEFQSPATIDFSWPAQTIYASSNLITETDYTFADSEVSKEASSRKRLKSECCSSPRSKACREKLRRDRLNERFLALSSVLDPGRPPKTEKVAILSDAQRMLIELRTETQKLKESNEELQEKIKELKAEKNELRDEKQRLKEEKDNLEQQVKSLASKAGFLSHPSAMGAAFTAQGQVAAGNKLMPFIGYPSVAMWQFMQPAVVDTSQDHVLRPPVA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="48076" e_stop="47880"/>
            <exon e_start="46829" e_stop="46455"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.991" e_score="0.939"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.939">
            <gDNA_exon_boundary e_start="48076" e_stop="47880" e_length="197"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.991">
            <gDNA_intron_boundary i_start="47879" i_stop="46830" i_length="1050"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="46829" e_stop="46455" e_length="375"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48076" stop="47880"/>
              <exon start="46829" stop="46455"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U336882" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGGGAAGGGGGAAATTTGAAGAAGGGAATTAGGTCATGGAGGTCGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATGACGGATATTACTTCTGCTGCATCTGTTACCGTCGCTGAGTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACGATCTATGCTTCTTCTAATCTCAT : TACTGAAACAGATTACACATTTGCGGATTCAGAAGTTAGCAAGGAGGCAAGCTCACGAAAGCGGTAAATAAATTATCCATTTCTTTTATATCATGGTTTGATAGGTTTGATGAACTCTTTTTATTACATTCTTCTTGTTTTAGAGATCTGGATCTGTTTATATATCCTATGTTCTAGTAAGGAGAAAACCTATTTGGCTATGGTTGTCCACTCTTAAATGTACTCATTTAAGAATTTTTCTTTCAAAATATGTGTATCCTACAACTATGTCACAGGCTAAAATGAAGTCTTGAATAGCCTTTCCTCCATTATTCCTAATATAACCATATCCCCCATGTATTGGGTCAAAACTGTCGTTATCTTTACCTACATGAC</gDNA_template>
            <first_frame> K  G  R  G  K  F  E  E  G  N  *  V  M  E  V  D  S  S  G  N  P  N  W  L  F  D  Y  E  L  M  T  D  I  T  S  A  A  S  V  T  V  A  E  F  Q  S  P  A  T  I  D  F  S  W  P  A  Q  T  I  Y  A  S  S  N  L  I :   T  E  T  D  Y  T  F  A  D  S  E  V  S  K  E  A  S  S  R  K  R  *  I  N  Y  P  F  L  L  Y  H  G  L  I  G  L  M  N  S  F  Y  Y  I  L  L  V  L  E  I  W  I  C  L  Y  I  L  C  S  S  K  E  K  T  Y  L  A  M  V  V  H  S  *  M  Y  S  F  K  N  F  S  F  K  I  C  V  S  Y  N  Y  V  T  G  *  N  E  V  L  N  S  L  S  S  I  I  P  N  I  T  I  S  P  M  Y  W  V  K  T  V  V  I  F  T  Y  M   </first_frame>
            <second_frame>  R  E  G  G  N  L  K  K  G  I  R  S  W  R  S  I  L  V  G  I  L  I  G  Y  L  I  M  S  *  *  R  I  L  L  L  L  H  L  L  P  S  L  S  F  S  L  R  L  L  L  I  S  A  G  L  L  K  R  S  M  L  L  L  I  S   : L  L  K  Q  I  T  H  L  R  I  Q  K  L  A  R  R  Q  A  H  E  S  G  K  *  I  I  H  F  F  Y  I  M  V  *  *  V  *  *  T  L  F  I  T  F  F  L  F  *  R  S  G  S  V  Y  I  S  Y  V  L  V  R  R  K  P  I  W  L  W  L  S  T  L  K  C  T  H  L  R  I  F  L  S  K  Y  V  Y  P  T  T  M  S  Q  A  K  M  K  S  *  I  A  F  P  P  L  F  L  I  *  P  Y  P  P  C  I  G  S  K  L  S  L  S  L  P  T  *  </second_frame>
            <third_frame>   G  K  G  E  I  *  R  R  E  L  G  H  G  G  R  F  *  W  E  S  *  L  V  I  *  L  *  V  D  D  G  Y  Y  F  C  C  I  C  Y  R  R  *  V  S  V  S  G  Y  Y  *  F  Q  L  A  C  S  N  D  L  C  F  F  *  S  H  :  Y  *  N  R  L  H  I  C  G  F  R  S  *  Q  G  G  K  L  T  K  A  V  N  K  L  S  I  S  F  I  S  W  F  D  R  F  D  E  L  F  L  L  H  S  S  C  F  R  D  L  D  L  F  I  Y  P  M  F  *  *  G  E  N  L  F  G  Y  G  C  P  L  L  N  V  L  I  *  E  F  F  F  Q  N  M  C  I  L  Q  L  C  H  R  L  K  *  S  L  E  *  P  F  L  H  Y  S  *  Y  N  H  I  P  H  V  L  G  Q  N  C  R  Y  L  Y  L  H  D </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="-"/>
                <serials PGL_serial="5" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="48043" stop="47880"/>
                    <exon start="46829" stop="46763"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VMEVDSSGNPNWLFDYELMTDITSAASVTVAEFQSPATIDFSWPAQTIYASSNLITETDYTFADSEVSKEASSRKR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="71199" PGL_stop="71834"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="71199" e_stop="71834"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="71199" e_stop="71834" e_length="636"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71199" stop="71834"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U322975" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTTCAAAATCAAATTTTGGGATCCACACATATAAAAATATTGCAGTCCACAAAAAAGTGTTCCATAAGGATTATTTGATTCTTTGTGATGAATGTCTTTTACCTTAGATATTTTAAACATTTTTTCTTTTGCAATGTTGAAATTAATATTGTTGTAAATTTTTTAAAGCCCAGAAACAGGAAATTTGTTGATATTTTAGATGAATATCAGTACGTCTAGCATTGGAACTTCAAATTTAGGTGTTTTACCTGAGGTAATGGGATTTCCACACCAAAAATTGTTGATTAAGAAATTTCATTTGGCAAGAAAACAACTTCTCCGGCAAAATATTACATTTTCTTGTAATCGAAAGACTGGAATTACTCGAGCCATTGCACCAGAAGCAACAAAGGTAATAAATTTTCCTCTGTTCTTTTAATTTGGAGTCTTTTGTGTGCCTGTTTTGTTGAGAGGTGATTAGACAGCACACAGCATAACTGTGTGAGGATATGACCTAGATAGGAGTTTTTGGATGTTGAGGATTAGGTAAAAAGATTAGTAGCTAGTCGAGCATCGTCTAGTTTACCTTCTATGTTTTGTTATTATTGATTTCTTAATATTTCACTCTTCGATTGTAGTATTACATGTTGTTTTC</gDNA_template>
            <first_frame> F  F  K  I  K  F  W  D  P  H  I  *  K  Y  C  S  P  Q  K  S  V  P  *  G  L  F  D  S  L  *  *  M  S  F  T  L  D  I  L  N  I  F  S  F  A  M  L  K  L  I  L  L  *  I  F  *  S  P  E  T  G  N  L  L  I  F  *  M  N  I  S  T  S  S  I  G  T  S  N  L  G  V  L  P  E  V  M  G  F  P  H  Q  K  L  L  I  K  K  F  H  L  A  R  K  Q  L  L  R  Q  N  I  T  F  S  C  N  R  K  T  G  I  T  R  A  I  A  P  E  A  T  K  V  I  N  F  P  L  F  F  *  F  G  V  F  C  V  P  V  L  L  R  G  D  *  T  A  H  S  I  T  V  *  G  Y  D  L  D  R  S  F  W  M  L  R  I  R  *  K  D  *  *  L  V  E  H  R  L  V  Y  L  L  C  F  V  I  I  D  F  L  I  F  H  S  S  I  V  V  L  H  V  V  F </first_frame>
            <second_frame>  F  S  K  S  N  F  G  I  H  T  Y  K  N  I  A  V  H  K  K  V  F  H  K  D  Y  L  I  L  C  D  E  C  L  L  P  *  I  F  *  T  F  F  L  L  Q  C  *  N  *  Y  C  C  K  F  F  K  A  Q  K  Q  E  I  C  *  Y  F  R  *  I  S  V  R  L  A  L  E  L  Q  I  *  V  F  Y  L  R  *  W  D  F  H  T  K  N  C  *  L  R  N  F  I  W  Q  E  N  N  F  S  G  K  I  L  H  F  L  V  I  E  R  L  E  L  L  E  P  L  H  Q  K  Q  Q  R  *  *  I  F  L  C  S  F  N  L  E  S  F  V  C  L  F  C  *  E  V  I  R  Q  H  T  A  *  L  C  E  D  M  T  *  I  G  V  F  G  C  *  G  L  G  K  K  I  S  S  *  S  S  I  V  *  F  T  F  Y  V  L  L  L  L  I  S  *  Y  F  T  L  R  L  *  Y  Y  M  L  F   </second_frame>
            <third_frame>   F  Q  N  Q  I  L  G  S  T  H  I  K  I  L  Q  S  T  K  K  C  S  I  R  I  I  *  F  F  V  M  N  V  F  Y  L  R  Y  F  K  H  F  F  F  C  N  V  E  I  N  I  V  V  N  F  L  K  P  R  N  R  K  F  V  D  I  L  D  E  Y  Q  Y  V  *  H  W  N  F  K  F  R  C  F  T  *  G  N  G  I  S  T  P  K  I  V  D  *  E  I  S  F  G  K  K  T  T  S  P  A  K  Y  Y  I  F  L  *  S  K  D  W  N  Y  S  S  H  C  T  R  S  N  K  G  N  K  F  S  S  V  L  L  I  W  S  L  L  C  A  C  F  V  E  R  *  L  D  S  T  Q  H  N  C  V  R  I  *  P  R  *  E  F  L  D  V  E  D  *  V  K  R  L  V  A  S  R  A  S  S  S  L  P  S  M  F  C  Y  Y  *  F  L  N  I  S  L  F  D  C  S  I  T  C  C  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71400" stop="71618"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MNISTSSIGTSNLGVLPEVMGFPHQKLLIKKFHLARKQLLRQNITFSCNRKTGITRAIAPEATKVINFPLFF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="72515" PGL_stop="74771"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="72515" e_stop="72562"/>
            <exon e_start="72658" e_stop="73057"/>
            <exon e_start="73157" e_stop="73321"/>
            <exon e_start="73609" e_stop="73872"/>
            <exon e_start="73984" e_stop="74193"/>
            <exon e_start="74616" e_stop="74771"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.979"/>
          <exon-intron don_prob="0.000" acc_prob="0.827" e_score="0.985"/>
          <exon-intron don_prob="0.932" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.835" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.995" e_score="1.000"/>
          <exon-only e_score="0.974"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.979">
            <gDNA_exon_boundary e_start="72515" e_stop="72562" e_length="48"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="72563" i_stop="72657" i_length="95"/>
          </intron>
          <exon e_serial="2" e_score="0.985">
            <gDNA_exon_boundary e_start="72658" e_stop="73057" e_length="400"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.827">
            <gDNA_intron_boundary i_start="73058" i_stop="73156" i_length="99"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="73157" e_stop="73321" e_length="165"/>
          </exon>
          <intron i_serial="3" don_prob="0.932" acc_prob="0.999">
            <gDNA_intron_boundary i_start="73322" i_stop="73608" i_length="287"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="73609" e_stop="73872" e_length="264"/>
          </exon>
          <intron i_serial="4" don_prob="0.987" acc_prob="0.835">
            <gDNA_intron_boundary i_start="73873" i_stop="73983" i_length="111"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="73984" e_stop="74193" e_length="210"/>
          </exon>
          <intron i_serial="5" don_prob="0.991" acc_prob="0.995">
            <gDNA_intron_boundary i_start="74194" i_stop="74615" i_length="422"/>
          </intron>
          <exon e_serial="6" e_score="0.974">
            <gDNA_exon_boundary e_start="74616" e_stop="74771" e_length="156"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72515" stop="72562"/>
              <exon start="72658" stop="73057"/>
              <exon start="73157" stop="73321"/>
              <exon start="73609" stop="73872"/>
              <exon start="73984" stop="74193"/>
              <exon start="74616" stop="74771"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U322976" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGCACTGTCCCTTTAGCCAACTATGTGCCTGTTTATGTAATGCTTCCA : TTAGATGTTATTTCAATTGACAATGTATTTCGGGACCAAGTTAAGTGTGAGAAGCAGTTCAAGGAACTGAGAGAAGCGGGTGTTGATGGGATCATGGTGGATGTCTGGTGGGGAATAGTAGAGGCCAATGGCCCCGGGCTATATGATTGGTCTGCGTATAGGAGTTTGTTCCAACTTGTTCAAAAGATTGGCCTCAAAATACAAGCTATTATGTCATTCCACCAATGTGGTGGCAATATAGGAGATGATGTTTTCATTCCTATACCCAAATGGGTACTAGCTATCGGAGAAAACAACCCTGATATTTTCTATACTAATCGGACTGGTACAAGGAACAAAGAATGCCTCTCACTTGCCGTGGATAACCAACCTCTATTTGAAGGGTCGAACTGCTATTCAG : ATTTACAGCGACTACATGAGGAGCTTTAGAGAGAACATGTCCGACTTCTTGGAAGCTGGAAGCATAGTAGACATAGAGGTAGGACTTGGTCCTGCCGGTGAGCTTAGATATCCATCGTACACTCAGTCTCAAGGATGGAAATTCCCCGGCATTGGAGAATTTCAG : TGCTATGACAAGTACATGAGAACAGATTTCAAGGGGGCAGCAACAAAGGCAGGCCACTCAGAGTGGGATCTTCCAGATGATGCAGGAACATATAATAATGTACCCGCCGAAACAGGATTCTTTGGACCAAATGGTACATACCTTACCGAGAAAGGGAAGTTCTTTTTGACCTGGTACTCTAGCAAGCTACTGCTTCACGGAGATCAGATCCTTGATGAAGCAAACAAAGCTTTCCTGGGATGCAAAGTGAAGCTATCAGCTAAA : GTAGCTGGAATTCACTGGTGGTACAAAGATGCCAGCCATGCTGCAGAGCTAACAGCGGGATTTTATAATTTGGACAATCGAGATGGCTATAGACCAATAGCAAGGATGTTATCGAGACACTATGGTACCTTTAATTTCACTTGCCTTGAGATGAGGAATTCAGAACATCCAGCTTATGCTAAGTCTGGCCCTCAAGAGCTAGTTCAACAG : GTTTTGAGTGTTGGCTGGAAAGAGAACATTGATGTAGCAGGTGAGAATGCGCTTGCAAGATATGACGGCTATGCCTACAACCAAATCCTTCTCAACGCTAGACCAAATGGTATCAACAAAAACGGTCCACCAAAACTAAAAATGGCTGGGCTGACT</gDNA_template>
            <first_frame> S  T  V  P  L  A  N  Y  V  P  V  Y  V  M  L  P  :  L  D  V  I  S  I  D  N  V  F  R  D  Q  V  K  C  E  K  Q  F  K  E  L  R  E  A  G  V  D  G  I  M  V  D  V  W  W  G  I  V  E  A  N  G  P  G  L  Y  D  W  S  A  Y  R  S  L  F  Q  L  V  Q  K  I  G  L  K  I  Q  A  I  M  S  F  H  Q  C  G  G  N  I  G  D  D  V  F  I  P  I  P  K  W  V  L  A  I  G  E  N  N  P  D  I  F  Y  T  N  R  T  G  T  R  N  K  E  C  L  S  L  A  V  D  N  Q  P  L  F  E  G  S  N  C  Y  S   : D  L  Q  R  L  H  E  E  L  *  R  E  H  V  R  L  L  G  S  W  K  H  S  R  H  R  G  R  T  W  S  C  R  *  A  *  I  S  I  V  H  S  V  S  R  M  E  I  P  R  H  W  R  I  S   : V  L  *  Q  V  H  E  N  R  F  Q  G  G  S  N  K  G  R  P  L  R  V  G  S  S  R  *  C  R  N  I  *  *  C  T  R  R  N  R  I  L  W  T  K  W  Y  I  P  Y  R  E  R  E  V  L  F  D  L  V  L  *  Q  A  T  A  S  R  R  S  D  P  *  *  S  K  Q  S  F  P  G  M  Q  S  E  A  I  S  *   : S  S  W  N  S  L  V  V  Q  R  C  Q  P  C  C  R  A  N  S  G  I  L  *  F  G  Q  S  R  W  L  *  T  N  S  K  D  V  I  E  T  L  W  Y  L  *  F  H  L  P  *  D  E  E  F  R  T  S  S  L  C  *  V  W  P  S  R  A  S  S  T   : G  F  E  C  W  L  E  R  E  H  *  C  S  R  *  E  C  A  C  K  I  *  R  L  C  L  Q  P  N  P  S  Q  R  *  T  K  W  Y  Q  Q  K  R  S  T  K  T  K  N  G  W  A  D  </first_frame>
            <second_frame>  A  L  S  L  *  P  T  M  C  L  F  M  *  C  F  H :   *  M  L  F  Q  L  T  M  Y  F  G  T  K  L  S  V  R  S  S  S  R  N  *  E  K  R  V  L  M  G  S  W  W  M  S  G  G  E  *  *  R  P  M  A  P  G  Y  M  I  G  L  R  I  G  V  C  S  N  L  F  K  R  L  A  S  K  Y  K  L  L  C  H  S  T  N  V  V  A  I  *  E  M  M  F  S  F  L  Y  P  N  G  Y  *  L  S  E  K  T  T  L  I  F  S  I  L  I  G  L  V  Q  G  T  K  N  A  S  H  L  P  W  I  T  N  L  Y  L  K  G  R  T  A  I  Q  :  I  Y  S  D  Y  M  R  S  F  R  E  N  M  S  D  F  L  E  A  G  S  I  V  D  I  E  V  G  L  G  P  A  G  E  L  R  Y  P  S  Y  T  Q  S  Q  G  W  K  F  P  G  I  G  E  F  Q  :  C  Y  D  K  Y  M  R  T  D  F  K  G  A  A  T  K  A  G  H  S  E  W  D  L  P  D  D  A  G  T  Y  N  N  V  P  A  E  T  G  F  F  G  P  N  G  T  Y  L  T  E  K  G  K  F  F  L  T  W  Y  S  S  K  L  L  L  H  G  D  Q  I  L  D  E  A  N  K  A  F  L  G  C  K  V  K  L  S  A  K  :  V  A  G  I  H  W  W  Y  K  D  A  S  H  A  A  E  L  T  A  G  F  Y  N  L  D  N  R  D  G  Y  R  P  I  A  R  M  L  S  R  H  Y  G  T  F  N  F  T  C  L  E  M  R  N  S  E  H  P  A  Y  A  K  S  G  P  Q  E  L  V  Q  Q  :  V  L  S  V  G  W  K  E  N  I  D  V  A  G  E  N  A  L  A  R  Y  D  G  Y  A  Y  N  Q  I  L  L  N  A  R  P  N  G  I  N  K  N  G  P  P  K  L  K  M  A  G  L  T </second_frame>
            <third_frame>   H  C  P  F  S  Q  L  C  A  C  L  C  N  A  S   : I  R  C  Y  F  N  *  Q  C  I  S  G  P  S  *  V  *  E  A  V  Q  G  T  E  R  S  G  C  *  W  D  H  G  G  C  L  V  G  N  S  R  G  Q  W  P  R  A  I  *  L  V  C  V  *  E  F  V  P  T  C  S  K  D  W  P  Q  N  T  S  Y  Y  V  I  P  P  M  W  W  Q  Y  R  R  *  C  F  H  S  Y  T  Q  M  G  T  S  Y  R  R  K  Q  P  *  Y  F  L  Y  *  S  D  W  Y  K  E  Q  R  M  P  L  T  C  R  G  *  P  T  S  I  *  R  V  E  L  L  F  R :   F  T  A  T  T  *  G  A  L  E  R  T  C  P  T  S  W  K  L  E  A  *  *  T  *  R  *  D  L  V  L  P  V  S  L  D  I  H  R  T  L  S  L  K  D  G  N  S  P  A  L  E  N  F  S :   A  M  T  S  T  *  E  Q  I  S  R  G  Q  Q  Q  R  Q  A  T  Q  S  G  I  F  Q  M  M  Q  E  H  I  I  M  Y  P  P  K  Q  D  S  L  D  Q  M  V  H  T  L  P  R  K  G  S  S  F  *  P  G  T  L  A  S  Y  C  F  T  E  I  R  S  L  M  K  Q  T  K  L  S  W  D  A  K  *  S  Y  Q  L  K :   *  L  E  F  T  G  G  T  K  M  P  A  M  L  Q  S  *  Q  R  D  F  I  I  W  T  I  E  M  A  I  D  Q  *  Q  G  C  Y  R  D  T  M  V  P  L  I  S  L  A  L  R  *  G  I  Q  N  I  Q  L  M  L  S  L  A  L  K  S  *  F  N  R :   F  *  V  L  A  G  K  R  T  L  M  *  Q  V  R  M  R  L  Q  D  M  T  A  M  P  T  T  K  S  F  S  T  L  D  Q  M  V  S  T  K  T  V  H  Q  N  *  K  W  L  G  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="72938" stop="73057"/>
                    <exon start="73157" stop="73321"/>
                    <exon start="73609" stop="73872"/>
                    <exon start="73984" stop="74193"/>
                    <exon start="74616" stop="74771"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>915</number_coding_nucleotides>
                  <number_encoded_amino_acids>305</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSEKTTLIFSILIGLVQGTKNASHLPWITNLYLKGRTAIQIYSDYMRSFRENMSDFLEAGSIVDIEVGLGPAGELRYPSYTQSQGWKFPGIGEFQCYDKYMRTDFKGAATKAGHSEWDLPDDAGTYNNVPAETGFFGPNGTYLTEKGKFFLTWYSSKLLLHGDQILDEANKAFLGCKVKLSAKVAGIHWWYKDASHAAELTAGFYNLDNRDGYRPIARMLSRHYGTFNFTCLEMRNSEHPAYAKSGPQELVQQVLSVGWKENIDVAGENALARYDGYAYNQILLNARPNGINKNGPPKLKMAGLT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="84114" PGL_stop="90373"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="84114" e_stop="84345"/>
            <exon e_start="88008" e_stop="88211"/>
            <exon e_start="88305" e_stop="88352"/>
            <exon e_start="88463" e_stop="88487"/>
            <exon e_start="88585" e_stop="88646"/>
            <exon e_start="88834" e_stop="88840"/>
            <exon e_start="88968" e_stop="89029"/>
            <exon e_start="89121" e_stop="89220"/>
            <exon e_start="89342" e_stop="89392"/>
            <exon e_start="89489" e_stop="89516"/>
            <exon e_start="90184" e_stop="90373"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.945" acc_prob="0.728" e_score="1.000"/>
          <exon-intron don_prob="0.965" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.698" acc_prob="0.795" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.942" acc_prob="0.753" e_score="1.000"/>
          <exon-intron don_prob="0.971" acc_prob="0.958" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="84114" e_stop="84345" e_length="232"/>
          </exon>
          <intron i_serial="1" don_prob="0.945" acc_prob="0.728">
            <gDNA_intron_boundary i_start="84346" i_stop="88007" i_length="3662"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="88008" e_stop="88211" e_length="204"/>
          </exon>
          <intron i_serial="2" don_prob="0.965" acc_prob="0.997">
            <gDNA_intron_boundary i_start="88212" i_stop="88304" i_length="93"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="88305" e_stop="88352" e_length="48"/>
          </exon>
          <intron i_serial="3" don_prob="0.985" acc_prob="0.000">
            <gDNA_intron_boundary i_start="88353" i_stop="88462" i_length="110"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="88463" e_stop="88487" e_length="25"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.000">
            <gDNA_intron_boundary i_start="88488" i_stop="88584" i_length="97"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="88585" e_stop="88646" e_length="62"/>
          </exon>
          <intron i_serial="5" don_prob="0.698" acc_prob="0.795">
            <gDNA_intron_boundary i_start="88647" i_stop="88833" i_length="187"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="88834" e_stop="88840" e_length="7"/>
          </exon>
          <intron i_serial="6" don_prob="0.989" acc_prob="1.000">
            <gDNA_intron_boundary i_start="88841" i_stop="88967" i_length="127"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="88968" e_stop="89029" e_length="62"/>
          </exon>
          <intron i_serial="7" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="89030" i_stop="89120" i_length="91"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="89121" e_stop="89220" e_length="100"/>
          </exon>
          <intron i_serial="8" don_prob="0.942" acc_prob="0.753">
            <gDNA_intron_boundary i_start="89221" i_stop="89341" i_length="121"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="89342" e_stop="89392" e_length="51"/>
          </exon>
          <intron i_serial="9" don_prob="0.971" acc_prob="0.958">
            <gDNA_intron_boundary i_start="89393" i_stop="89488" i_length="96"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="89489" e_stop="89516" e_length="28"/>
          </exon>
          <intron i_serial="10" don_prob="0.989" acc_prob="1.000">
            <gDNA_intron_boundary i_start="89517" i_stop="90183" i_length="667"/>
          </intron>
          <exon e_serial="11" e_score="0.989">
            <gDNA_exon_boundary e_start="90184" e_stop="90373" e_length="190"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84114" stop="84345"/>
              <exon start="88008" stop="88211"/>
              <exon start="88305" stop="88352"/>
              <exon start="88463" stop="88487"/>
              <exon start="88585" stop="88646"/>
              <exon start="88834" stop="88840"/>
              <exon start="88968" stop="89029"/>
              <exon start="89121" stop="89220"/>
              <exon start="89342" stop="89392"/>
              <exon start="89489" stop="89516"/>
              <exon start="90184" stop="90373"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U321983" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATTCATTTTGCTTCACTCTAATACACTAAACTAGAAGCTTCTCTCTAAAACTCACATGCAGTGGATCGGAAAAAGTTCCACTGCTGTTTTCATCTCCAAAGCTAAGGCGAAAATATTAGAATTTTTCATCTAAAAGCTCCCAAGCTAACTTCATGCTTCTCTCCAAGCGATTTTTTTCGAAGTAGAGTACTACGGATCCAAAAGATTTCATTTCAATCTACCAAAATCAAG : TTCTAGTTTGCATCTTCTCATGGGTCGCAATAAGATTGTGATGAAGAAAATTGAGGATTCAACATCCCGTAAACAGTTCTATTCAAATCGCAAGGATAGCATTGTGAAGAAGTCAAATGAGCTGGCGGTTGTATGTGGTACAGATGTGGGGTTGTTGATGTTTTCTCCATCTGGTCAGCTGACTACCTATTCTAGCAAAGAAAG : TATTGAGGACATCATGATCGAAGCTATGAACAAGTCTGTGAATCCGCG : ACCCATACCAAATCTAAATGAACAG : CTTTTGATGCAGAGTCTCAAACAGTCAAAATCTGAAGGCCAAATGGTTGGAAAAATAGCTAT : TGCTGAG : GCTCATGAGAAGAAGCTTAATGAGCTCAAAGAAACACTAAGGGAGGCACAACAGAAAATAAG : GTATTGCAATCCGCAAGTGGAGAATATCAGCTCAGTCCAAGAAGCTGAAGCATATGAGCAGTTCCTTAGGAGTAATATGGAACAGATTCAACAATCAAAA : GCAAAACTCTTAGGTGTCCAAGGATTAGTCCATAGAAATGAATATCCTGCG : GTCAACACAGAGGATACGGCTGCTGCAG : GAACCAGTAGTGGATGGATGTTTTGAGGAATCAGGCCGGATCGCGGTGGAGAAGTAGCTGCGGGTGTCCAACAGCTGCAGCAGAAATATAATTATGTTATATTAAGAACTTAGTAGAATAAATAACTTGCACCAATCAAGCATGCAAAAGTATGAATAATGTTGCATCTGACTATTGTGAATTCAACTTT</gDNA_template>
            <first_frame> N  S  F  C  F  T  L  I  H  *  T  R  S  F  S  L  K  L  T  C  S  G  S  E  K  V  P  L  L  F  S  S  P  K  L  R  R  K  Y  *  N  F  S  S  K  S  S  Q  A  N  F  M  L  L  S  K  R  F  F  S  K  *  S  T  T  D  P  K  D  F  I  S  I  Y  Q  N  Q   : V  L  V  C  I  F  S  W  V  A  I  R  L  *  *  R  K  L  R  I  Q  H  P  V  N  S  S  I  Q  I  A  R  I  A  L  *  R  S  Q  M  S  W  R  L  Y  V  V  Q  M  W  G  C  *  C  F  L  H  L  V  S  *  L  P  I  L  A  K  K   : V  L  R  T  S  *  S  K  L  *  T  S  L  *  I  R   : D  P  Y  Q  I  *  M  N  S :   F  *  C  R  V  S  N  S  Q  N  L  K  A  K  W  L  E  K  *  L   : L  L  R :   L  M  R  R  S  L  M  S  S  K  K  H  *  G  R  H  N  R  K  *   : G  I  A  I  R  K  W  R  I  S  A  Q  S  K  K  L  K  H  M  S  S  S  L  G  V  I  W  N  R  F  N  N  Q  K :   Q  N  S  *  V  S  K  D  *  S  I  E  M  N  I  L  R :   S  T  Q  R  I  R  L  L  Q  :  E  P  V  V  D  G  C  F  E  E  S  G  R  I  A  V  E  K  *  L  R  V  S  N  S  C  S  R  N  I  I  M  L  Y  *  E  L  S  R  I  N  N  L  H  Q  S  S  M  Q  K  Y  E  *  C  C  I  *  L  L  *  I  Q  L  </first_frame>
            <second_frame>  I  H  F  A  S  L  *  Y  T  K  L  E  A  S  L  *  N  S  H  A  V  D  R  K  K  F  H  C  C  F  H  L  Q  S  *  G  E  N  I  R  I  F  H  L  K  A  P  K  L  T  S  C  F  S  P  S  D  F  F  R  S  R  V  L  R  I  Q  K  I  S  F  Q  S  T  K  I  K  :  F  *  F  A  S  S  H  G  S  Q  *  D  C  D  E  E  N  *  G  F  N  I  P  *  T  V  L  F  K  S  Q  G  *  H  C  E  E  V  K  *  A  G  G  C  M  W  Y  R  C  G  V  V  D  V  F  S  I  W  S  A  D  Y  L  F  *  Q  R  K  :  Y  *  G  H  H  D  R  S  Y  E  Q  V  C  E  S  A  :  T  H  T  K  S  K  *  T   : A  F  D  A  E  S  Q  T  V  K  I  *  R  P  N  G  W  K  N  S  Y  :  C  *   : G  S  *  E  E  A  *  *  A  Q  R  N  T  K  G  G  T  T  E  N  K  :  V  L  Q  S  A  S  G  E  Y  Q  L  S  P  R  S  *  S  I  *  A  V  P  *  E  *  Y  G  T  D  S  T  I  K   : S  K  T  L  R  C  P  R  I  S  P  *  K  *  I  S  C   : G  Q  H  R  G  Y  G  C  C  R :   N  Q  *  W  M  D  V  L  R  N  Q  A  G  S  R  W  R  S  S  C  G  C  P  T  A  A  A  E  I  *  L  C  Y  I  K  N  L  V  E  *  I  T  C  T  N  Q  A  C  K  S  M  N  N  V  A  S  D  Y  C  E  F  N  F </second_frame>
            <third_frame>   F  I  L  L  H  S  N  T  L  N  *  K  L  L  S  K  T  H  M  Q  W  I  G  K  S  S  T  A  V  F  I  S  K  A  K  A  K  I  L  E  F  F  I  *  K  L  P  S  *  L  H  A  S  L  Q  A  I  F  F  E  V  E  Y  Y  G  S  K  R  F  H  F  N  L  P  K  S  S :   S  S  L  H  L  L  M  G  R  N  K  I  V  M  K  K  I  E  D  S  T  S  R  K  Q  F  Y  S  N  R  K  D  S  I  V  K  K  S  N  E  L  A  V  V  C  G  T  D  V  G  L  L  M  F  S  P  S  G  Q  L  T  T  Y  S  S  K  E  S :   I  E  D  I  M  I  E  A  M  N  K  S  V  N  P  R :   P  I  P  N  L  N  E  Q  :  L  L  M  Q  S  L  K  Q  S  K  S  E  G  Q  M  V  G  K  I  A  I :   A  E  :  A  H  E  K  K  L  N  E  L  K  E  T  L  R  E  A  Q  Q  K  I  R :   Y  C  N  P  Q  V  E  N  I  S  S  V  Q  E  A  E  A  Y  E  Q  F  L  R  S  N  M  E  Q  I  Q  Q  S  K  :  A  K  L  L  G  V  Q  G  L  V  H  R  N  E  Y  P  A  :  V  N  T  E  D  T  A  A  A   : G  T  S  S  G  W  M  F  *  G  I  R  P  D  R  G  G  E  V  A  A  G  V  Q  Q  L  Q  Q  K  Y  N  Y  V  I  L  R  T  *  *  N  K  *  L  A  P  I  K  H  A  K  V  *  I  M  L  H  L  T  I  V  N  S  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="84263" stop="84345"/>
                    <exon start="88008" stop="88211"/>
                    <exon start="88305" stop="88352"/>
                    <exon start="88463" stop="88487"/>
                    <exon start="88585" stop="88646"/>
                    <exon start="88834" stop="88840"/>
                    <exon start="88968" stop="89029"/>
                    <exon start="89121" stop="89220"/>
                    <exon start="89342" stop="89392"/>
                    <exon start="89489" stop="89516"/>
                    <exon start="90184" stop="90209"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>693</number_coding_nucleotides>
                  <number_encoded_amino_acids>231</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LHASLQAIFFEVEYYGSKRFHFNLPKSSSSLHLLMGRNKIVMKKIEDSTSRKQFYSNRKDSIVKKSNELAVVCGTDVGLLMFSPSGQLTTYSSKESIEDIMIEAMNKSVNPRPIPNLNEQLLMQSLKQSKSEGQMVGKIAIAEAHEKKLNELKETLREAQQKIRYCNPQVENISSVQEAEAYEQFLRSNMEQIQQSKAKLLGVQGLVHRNEYPAVNTEDTAAAGTSSGWMF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="91611" PGL_stop="105572"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="91611" e_stop="91684"/>
            <exon e_start="91786" e_stop="91859"/>
            <exon e_start="91980" e_stop="92013"/>
            <exon e_start="92481" e_stop="92608"/>
            <exon e_start="92700" e_stop="92846"/>
            <exon e_start="103668" e_stop="103837"/>
            <exon e_start="103922" e_stop="103975"/>
            <exon e_start="104073" e_stop="104097"/>
            <exon e_start="104174" e_stop="104235"/>
            <exon e_start="104431" e_stop="104437"/>
            <exon e_start="104542" e_stop="104603"/>
            <exon e_start="104706" e_stop="104805"/>
            <exon e_start="104887" e_stop="104937"/>
            <exon e_start="105017" e_stop="105053"/>
            <exon e_start="105314" e_stop="105572"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.772" acc_prob="0.962" e_score="1.000"/>
          <exon-intron don_prob="0.855" acc_prob="0.299" e_score="1.000"/>
          <exon-intron don_prob="0.962" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.957" acc_prob="0.884" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.553" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.967" acc_prob="0.377" e_score="1.000"/>
          <exon-intron don_prob="0.926" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.866" acc_prob="0.855" e_score="1.000"/>
          <exon-intron don_prob="0.979" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.894" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="91611" e_stop="91684" e_length="74"/>
          </exon>
          <intron i_serial="1" don_prob="0.772" acc_prob="0.962">
            <gDNA_intron_boundary i_start="91685" i_stop="91785" i_length="101"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="91786" e_stop="91859" e_length="74"/>
          </exon>
          <intron i_serial="2" don_prob="0.855" acc_prob="0.299">
            <gDNA_intron_boundary i_start="91860" i_stop="91979" i_length="120"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="91980" e_stop="92013" e_length="34"/>
          </exon>
          <intron i_serial="3" don_prob="0.962" acc_prob="0.000">
            <gDNA_intron_boundary i_start="92014" i_stop="92480" i_length="467"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="92481" e_stop="92608" e_length="128"/>
          </exon>
          <intron i_serial="4" don_prob="0.957" acc_prob="0.884">
            <gDNA_intron_boundary i_start="92609" i_stop="92699" i_length="91"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="92700" e_stop="92846" e_length="147"/>
          </exon>
          <intron i_serial="5" don_prob="0.985" acc_prob="0.000">
            <gDNA_intron_boundary i_start="92847" i_stop="103667" i_length="10821"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="103668" e_stop="103837" e_length="170"/>
          </exon>
          <intron i_serial="6" don_prob="0.994" acc_prob="1.000">
            <gDNA_intron_boundary i_start="103838" i_stop="103921" i_length="84"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="103922" e_stop="103975" e_length="54"/>
          </exon>
          <intron i_serial="7" don_prob="0.997" acc_prob="0.990">
            <gDNA_intron_boundary i_start="103976" i_stop="104072" i_length="97"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="104073" e_stop="104097" e_length="25"/>
          </exon>
          <intron i_serial="8" don_prob="0.553" acc_prob="0.997">
            <gDNA_intron_boundary i_start="104098" i_stop="104173" i_length="76"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="104174" e_stop="104235" e_length="62"/>
          </exon>
          <intron i_serial="9" don_prob="0.967" acc_prob="0.377">
            <gDNA_intron_boundary i_start="104236" i_stop="104430" i_length="195"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="104431" e_stop="104437" e_length="7"/>
          </exon>
          <intron i_serial="10" don_prob="0.926" acc_prob="1.000">
            <gDNA_intron_boundary i_start="104438" i_stop="104541" i_length="104"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="104542" e_stop="104603" e_length="62"/>
          </exon>
          <intron i_serial="11" don_prob="0.866" acc_prob="0.855">
            <gDNA_intron_boundary i_start="104604" i_stop="104705" i_length="102"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="104706" e_stop="104805" e_length="100"/>
          </exon>
          <intron i_serial="12" don_prob="0.979" acc_prob="0.972">
            <gDNA_intron_boundary i_start="104806" i_stop="104886" i_length="81"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="104887" e_stop="104937" e_length="51"/>
          </exon>
          <intron i_serial="13" don_prob="0.894" acc_prob="1.000">
            <gDNA_intron_boundary i_start="104938" i_stop="105016" i_length="79"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="105017" e_stop="105053" e_length="37"/>
          </exon>
          <intron i_serial="14" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="105054" i_stop="105313" i_length="260"/>
          </intron>
          <exon e_serial="15" e_score="0.992">
            <gDNA_exon_boundary e_start="105314" e_stop="105572" e_length="259"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91611" stop="91684"/>
              <exon start="91786" stop="91859"/>
              <exon start="91980" stop="92013"/>
              <exon start="92481" stop="92608"/>
              <exon start="92700" stop="92846"/>
              <exon start="103668" stop="103837"/>
              <exon start="103922" stop="103975"/>
              <exon start="104073" stop="104097"/>
              <exon start="104174" stop="104235"/>
              <exon start="104431" stop="104437"/>
              <exon start="104542" stop="104603"/>
              <exon start="104706" stop="104805"/>
              <exon start="104887" stop="104937"/>
              <exon start="105017" stop="105053"/>
              <exon start="105314" stop="105572"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U323092" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCCAGAGGCAAAATTTCATGTGAAACCTAAATATCCATAGCCCTCCGATCTGAAGCCTCTGATATCCTTCCATG : GGTCTAATGTAATCCGAAGGCATAACTCAACTAGTATGTGGATGGACAGTACATTGCCTCCGGTCTATTTGATG : TTATAATTCTCCTACCATTAAGTTCAATTTTAAG : TGTCCAAGTCCACAATATGTAGAGTGTCCTCTTCCTTTTATGGAGTTATGGTCTAATAGCCAAAGAGGAAAAAGAACATCAAGAAGGAAAAGCTCTATGTGGTATTGAGGATTCTCATCAAATTAAAA : TGGATACTCTCTCCTAATAGAAAAGTTAACGAACAATTAATCATGAGGGAACTTCATGGCATTTGTAGCCTAACTTGAATAAGTTTCTTGGATTGGCTTGACCTAAATAGAAGGAAGCTCGAGCTACATTGCAAAAGCTTTTATCAG : CTTGTGATGAAGAAAATTGAGGATCCAACATCCCGTCAACAGTTCTATTCAAAGCGCAAGGATACCATCCTTAAGAAGTCCAATGAGTTGGCTGTTTTATGTGATGTGGATGTTGGTCTTCTAATGTTTTCTCCAGCCGGCGAAGTGACTAGCTATTCTAGCAAAGAACG : TCTTGAGGATGTCATGCTCCTTGCTATGAACAAGGCTGGTGAACTGAACAAGCT : ATCTCCTGAAAATCCAAATGAACAG : GCTTTGATGGACTCTCTCACACAATCAAAACATGAAGCCGAAATGGTGGAGAAGATAGCGAT : TGTTGAG : GCTCATGAGGAGAAGCTTAATGGGGTCAAAGAAAGACTAAGTGAAGCACAACAGAAAATAAG : GTATTACGAACCACAAGTGGAGAGTATCAACTCTGTCCAAGAAGCTGATGCATATGAGAAGTTCATTTTGAGTGCTCTGGAACTGATTCAACTATCAAAG : GCAAAACTCTTGGGTGACCAGGAATTTCTCCAGAGAAATGAAAATGTTGCG : GTGTCTTCTGTCAACGCAGAGGCTATGGCTGCTGAAG : GAACCAGTGGGGGATGGATGTATTGAGGAAACAGGCCGGATCACGGCGGGGAAGTAGCTGAGGATGTCCAACAGCTATAGCAGGAATAATAGTTATACTAGTTTATAGGTTAAGAACTTAGTAGAATAAATAACTTGCCCCTATCAGGCAAGCAAAAGTATGAATAATGTTGCATTTGTCTATTGTGAATGCAACTATTTGAATATGGCATCTGAATATGGCATCAAAACATAGCTATTGTGTTTTGAAATAGAAAACA</gDNA_template>
            <first_frame> A  R  G  K  I  S  C  E  T  *  I  S  I  A  L  R  S  E  A  S  D  I  L  P  W :   V  *  C  N  P  K  A  *  L  N  *  Y  V  D  G  Q  Y  I  A  S  G  L  F  D   : V  I  I  L  L  P  L  S  S  I  L  S :   V  Q  V  H  N  M  *  S  V  L  F  L  L  W  S  Y  G  L  I  A  K  E  E  K  E  H  Q  E  G  K  A  L  C  G  I  E  D  S  H  Q  I  K   : M  D  T  L  S  *  *  K  S  *  R  T  I  N  H  E  G  T  S  W  H  L  *  P  N  L  N  K  F  L  G  L  A  *  P  K  *  K  E  A  R  A  T  L  Q  K  L  L  S   : A  C  D  E  E  N  *  G  S  N  I  P  S  T  V  L  F  K  A  Q  G  Y  H  P  *  E  V  Q  *  V  G  C  F  M  *  C  G  C  W  S  S  N  V  F  S  S  R  R  S  D  *  L  F  *  Q  R  T  :  S  *  G  C  H  A  P  C  Y  E  Q  G  W  *  T  E  Q  A  :  I  S  *  K  S  K  *  T   : G  F  D  G  L  S  H  T  I  K  T  *  S  R  N  G  G  E  D  S  D  :  C  *   : G  S  *  G  E  A  *  W  G  Q  R  K  T  K  *  S  T  T  E  N  K  :  V  L  R  T  T  S  G  E  Y  Q  L  C  P  R  S  *  C  I  *  E  V  H  F  E  C  S  G  T  D  S  T  I  K   : G  K  T  L  G  *  P  G  I  S  P  E  K  *  K  C  C   : G  V  F  C  Q  R  R  G  Y  G  C  *  R :   N  Q  W  G  M  D  V  L  R  K  Q  A  G  S  R  R  G  S  S  *  G  C  P  T  A  I  A  G  I  I  V  I  L  V  Y  R  L  R  T  *  *  N  K  *  L  A  P  I  R  Q  A  K  V  *  I  M  L  H  L  S  I  V  N  A  T  I  *  I  W  H  L  N  M  A  S  K  H  S  Y  C  V  L  K  *  K  T </first_frame>
            <second_frame>  P  E  A  K  F  H  V  K  P  K  Y  P  *  P  S  D  L  K  P  L  I  S  F  H   : G  S  N  V  I  R  R  H  N  S  T  S  M  W  M  D  S  T  L  P  P  V  Y  L  M  :  L  *  F  S  Y  H  *  V  Q  F  *   : V  S  K  S  T  I  C  R  V  S  S  S  F  Y  G  V  M  V  *  *  P  K  R  K  K  N  I  K  K  E  K  L  Y  V  V  L  R  I  L  I  K  L  K  :  W  I  L  S  P  N  R  K  V  N  E  Q  L  I  M  R  E  L  H  G  I  C  S  L  T  *  I  S  F  L  D  W  L  D  L  N  R  R  K  L  E  L  H  C  K  S  F  Y  Q  :  L  V  M  K  K  I  E  D  P  T  S  R  Q  Q  F  Y  S  K  R  K  D  T  I  L  K  K  S  N  E  L  A  V  L  C  D  V  D  V  G  L  L  M  F  S  P  A  G  E  V  T  S  Y  S  S  K  E  R :   L  E  D  V  M  L  L  A  M  N  K  A  G  E  L  N  K  L :   S  P  E  N  P  N  E  Q  :  A  L  M  D  S  L  T  Q  S  K  H  E  A  E  M  V  E  K  I  A  I :   V  E  :  A  H  E  E  K  L  N  G  V  K  E  R  L  S  E  A  Q  Q  K  I  R :   Y  Y  E  P  Q  V  E  S  I  N  S  V  Q  E  A  D  A  Y  E  K  F  I  L  S  A  L  E  L  I  Q  L  S  K  :  A  K  L  L  G  D  Q  E  F  L  Q  R  N  E  N  V  A  :  V  S  S  V  N  A  E  A  M  A  A  E   : G  T  S  G  G  W  M  Y  *  G  N  R  P  D  H  G  G  E  V  A  E  D  V  Q  Q  L  *  Q  E  *  *  L  Y  *  F  I  G  *  E  L  S  R  I  N  N  L  P  L  S  G  K  Q  K  Y  E  *  C  C  I  C  L  L  *  M  Q  L  F  E  Y  G  I  *  I  W  H  Q  N  I  A  I  V  F  *  N  R  K   </second_frame>
            <third_frame>   Q  R  Q  N  F  M  *  N  L  N  I  H  S  P  P  I  *  S  L  *  Y  P  S  M  :  G  L  M  *  S  E  G  I  T  Q  L  V  C  G  W  T  V  H  C  L  R  S  I  *  C :   Y  N  S  P  T  I  K  F  N  F  K  :  C  P  S  P  Q  Y  V  E  C  P  L  P  F  M  E  L  W  S  N  S  Q  R  G  K  R  T  S  R  R  K  S  S  M  W  Y  *  G  F  S  S  N  *  N :   G  Y  S  L  L  I  E  K  L  T  N  N  *  S  *  G  N  F  M  A  F  V  A  *  L  E  *  V  S  W  I  G  L  T  *  I  E  G  S  S  S  Y  I  A  K  A  F  I  S :   L  *  *  R  K  L  R  I  Q  H  P  V  N  S  S  I  Q  S  A  R  I  P  S  L  R  S  P  M  S  W  L  F  Y  V  M  W  M  L  V  F  *  C  F  L  Q  P  A  K  *  L  A  I  L  A  K  N   : V  L  R  M  S  C  S  L  L  *  T  R  L  V  N  *  T  S   : Y  L  L  K  I  Q  M  N  R :   L  *  W  T  L  S  H  N  Q  N  M  K  P  K  W  W  R  R  *  R   : L  L  R :   L  M  R  R  S  L  M  G  S  K  K  D  *  V  K  H  N  R  K  *   : G  I  T  N  H  K  W  R  V  S  T  L  S  K  K  L  M  H  M  R  S  S  F  *  V  L  W  N  *  F  N  Y  Q  R :   Q  N  S  W  V  T  R  N  F  S  R  E  M  K  M  L  R :   C  L  L  S  T  Q  R  L  W  L  L  K  :  E  P  V  G  D  G  C  I  E  E  T  G  R  I  T  A  G  K  *  L  R  M  S  N  S  Y  S  R  N  N  S  Y  T  S  L  *  V  K  N  L  V  E  *  I  T  C  P  Y  Q  A  S  K  S  M  N  N  V  A  F  V  Y  C  E  C  N  Y  L  N  M  A  S  E  Y  G  I  K  T  *  L  L  C  F  E  I  E  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92778" stop="92846"/>
                    <exon start="103668" stop="103837"/>
                    <exon start="103922" stop="103975"/>
                    <exon start="104073" stop="104097"/>
                    <exon start="104174" stop="104235"/>
                    <exon start="104431" stop="104437"/>
                    <exon start="104542" stop="104603"/>
                    <exon start="104706" stop="104805"/>
                    <exon start="104887" stop="104937"/>
                    <exon start="105017" stop="105053"/>
                    <exon start="105314" stop="105339"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>660</number_coding_nucleotides>
                  <number_encoded_amino_acids>220</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ISFLDWLDLNRRKLELHCKSFYQLVMKKIEDPTSRQQFYSKRKDTILKKSNELAVLCDVDVGLLMFSPAGEVTSYSSKERLEDVMLLAMNKAGELNKLSPENPNEQALMDSLTQSKHEAEMVEKIAIVEAHEEKLNGVKERLSEAQQKIRYYEPQVESINSVQEADAYEKFILSALELIQLSKAKLLGDQEFLQRNENVAVSSVNAEAMAAEGTSGGWMY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="91620" e_stop="91684"/>
            <exon e_start="91786" e_stop="92275"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.772" acc_prob="0.962" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="91620" e_stop="91684" e_length="65"/>
          </exon>
          <intron i_serial="1" don_prob="0.772" acc_prob="0.962">
            <gDNA_intron_boundary i_start="91685" i_stop="91785" i_length="101"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="91786" e_stop="92275" e_length="490"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91620" stop="91684"/>
              <exon start="91786" stop="92275"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U337769" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAATTTCATGTGAAACCTAAATATCCATAGCCCTCCGATCTGAAGCCTCTGATATCCTTCCATG : GGTCTAATGTAATCCGAAGGCATAACTCAACTAGTATGTGGATGGACAGTACATTGCCTCCGGTCTATTTGATGGTCCGTTACTCAAACACTCCGATTGTTTCAATCGGGTTGATTTGATTATCATTTTCATTCAGTTTTTGAAGTTTTTATCAAATGTGACATTGAGTTCTGCTTGGTTGAACGTTTTGGCAGTTATAATTCTCCTACCATTAAGTTCAATTTTAAGGTAATCTTCATTGATTTTTATGCTCTGTTTTGTCCCATTGTTTAGATGGAATTTATAATTCTCCCACTGTTAAGTTCACTTCTAGCTAATTTTTGTTGATTTATGGGAAAAAAGCTCAGGTGTCATGTACTCTTAGCTTTGTAAAAAGTGATATTGTATTTTGAGAGTGTCGGGTTCGTTCGGTTTTCATTTGATTCAGTTCTGAAGATTTAAGTGTTCTGTTATGCTCGGTTTGGTTGTAGTTTTAGCAATTTCACTACTA</gDNA_template>
            <first_frame> K  I  S  C  E  T  *  I  S  I  A  L  R  S  E  A  S  D  I  L  P  W :   V  *  C  N  P  K  A  *  L  N  *  Y  V  D  G  Q  Y  I  A  S  G  L  F  D  G  P  L  L  K  H  S  D  C  F  N  R  V  D  L  I  I  I  F  I  Q  F  L  K  F  L  S  N  V  T  L  S  S  A  W  L  N  V  L  A  V  I  I  L  L  P  L  S  S  I  L  R  *  S  S  L  I  F  M  L  C  F  V  P  L  F  R  W  N  L  *  F  S  H  C  *  V  H  F  *  L  I  F  V  D  L  W  E  K  S  S  G  V  M  Y  S  *  L  C  K  K  *  Y  C  I  L  R  V  S  G  S  F  G  F  H  L  I  Q  F  *  R  F  K  C  S  V  M  L  G  L  V  V  V  L  A  I  S  L  L </first_frame>
            <second_frame>  K  F  H  V  K  P  K  Y  P  *  P  S  D  L  K  P  L  I  S  F  H   : G  S  N  V  I  R  R  H  N  S  T  S  M  W  M  D  S  T  L  P  P  V  Y  L  M  V  R  Y  S  N  T  P  I  V  S  I  G  L  I  *  L  S  F  S  F  S  F  *  S  F  Y  Q  M  *  H  *  V  L  L  G  *  T  F  W  Q  L  *  F  S  Y  H  *  V  Q  F  *  G  N  L  H  *  F  L  C  S  V  L  S  H  C  L  D  G  I  Y  N  S  P  T  V  K  F  T  S  S  *  F  L  L  I  Y  G  K  K  A  Q  V  S  C  T  L  S  F  V  K  S  D  I  V  F  *  E  C  R  V  R  S  V  F  I  *  F  S  S  E  D  L  S  V  L  L  C  S  V  W  L  *  F  *  Q  F  H  Y   </second_frame>
            <third_frame>   N  F  M  *  N  L  N  I  H  S  P  P  I  *  S  L  *  Y  P  S  M  :  G  L  M  *  S  E  G  I  T  Q  L  V  C  G  W  T  V  H  C  L  R  S  I  *  W  S  V  T  Q  T  L  R  L  F  Q  S  G  *  F  D  Y  H  F  H  S  V  F  E  V  F  I  K  C  D  I  E  F  C  L  V  E  R  F  G  S  Y  N  S  P  T  I  K  F  N  F  K  V  I  F  I  D  F  Y  A  L  F  C  P  I  V  *  M  E  F  I  I  L  P  L  L  S  S  L  L  A  N  F  C  *  F  M  G  K  K  L  R  C  H  V  L  L  A  L  *  K  V  I  L  Y  F  E  S  V  G  F  V  R  F  S  F  D  S  V  L  K  I  *  V  F  C  Y  A  R  F  G  C  S  F  S  N  F  T  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="91820" stop="92017"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YVDGQYIASGLFDGPLLKHSDCFNRVDLIIIFIQFLKFLSNVTLSSAWLNVLAVIILLPLSSILR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="114698" PGL_stop="115849"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="114698" e_stop="115356"/>
            <exon e_start="115441" e_stop="115849"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.989" acc_prob="0.993" e_score="0.994"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="114698" e_stop="115356" e_length="659"/>
          </exon>
          <intron i_serial="1" don_prob="0.989" acc_prob="0.993">
            <gDNA_intron_boundary i_start="115357" i_stop="115440" i_length="84"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="115441" e_stop="115849" e_length="409"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="114698" stop="115356"/>
              <exon start="115441" stop="115849"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U344111" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAAGAGCAGCACGTAAATTAAGAGAGAACCAAAGCACTACCAGTGTACAGACAGAAGATCTTGTAGAAGATCCTGCTCAGGAGTCGGCAGATTATCATCGTAACCTTGGTCTTCAGATGGTTTCTGGTTTAAGCAACGAGCTTGAGAATGTAAGAAAAGCTTCACTTATTGACGGCGAGAACTTAAGTGCAGCTGTCATGAAGCTTAATCACTCACTCATGAAAACTAAAGAGTTTCTGGACACTGATATGAGAAGTTTGGAGGATGAAAGTAAGTTCCGTGATACACTCACAAATTTTATCCAACATGCGGAACAGGACATTACTTGCATACTAGAAGAAGAGAAAAAGATAATGTCTTTGGTTAAGAGCACAGGAGATTACTTCCATGGAAATTCAGGGAAGGATGAAGGCTTGCGTCTCTTTTCAGTCGTTAGTGATTTCTTGATTATGTTGGACAAGGCATGTACAGTGGTGAGAAACTCAACGAAGTTACCAGTTAAGATTCCTAAAAAAGGGACATTAACATCTCCTTCCCAAGAATCCTGTCCTGAGTCTTTGCAAGACATACGTAAACAACTATTTCCTGCAATCCAGGAGCGACAGATGCACTATTCTAGTTCAGACGACGAGAGCTCAAGCCCGTAGCTGTCTATTTAG : GTGTCAGAGTACTTTGGAGCTAATATGGCTTGGATAATAGTCCACAGAAGTATGTATTTAACGACTATATGAGGCCTAAGGTGTGCCTCCTACACCCAGTTAGCAAACACATGCTCTACGAGATAGAGTGAATAGACATTTTGCTTCAATGATCTCTTCGAGTCCTAGCACTAGCGGTAGGAAGAATGGCTATAGTATAGATGCCATAGTAGTTATTGCATGGTCTACTACAACGATCCACAGAGTTAAACCACAGCCTCTCACTGTCTGTAGTCACCTTTATCTATAACAATCCAAATATCGAGATGGTAATGGTACTGAAATCTCCTAAATATTTGTTAAATTATATTTAGTATGTATTGGAAGTTAGACCAGATTCGTATAGTTTCAGCTTCTTTTTCTCGTCAAG</gDNA_template>
            <first_frame> *  E  Q  H  V  N  *  E  R  T  K  A  L  P  V  Y  R  Q  K  I  L  *  K  I  L  L  R  S  R  Q  I  I  I  V  T  L  V  F  R  W  F  L  V  *  A  T  S  L  R  M  *  E  K  L  H  L  L  T  A  R  T  *  V  Q  L  S  *  S  L  I  T  H  S  *  K  L  K  S  F  W  T  L  I  *  E  V  W  R  M  K  V  S  S  V  I  H  S  Q  I  L  S  N  M  R  N  R  T  L  L  A  Y  *  K  K  R  K  R  *  C  L  W  L  R  A  Q  E  I  T  S  M  E  I  Q  G  R  M  K  A  C  V  S  F  Q  S  L  V  I  S  *  L  C  W  T  R  H  V  Q  W  *  E  T  Q  R  S  Y  Q  L  R  F  L  K  K  G  H  *  H  L  L  P  K  N  P  V  L  S  L  C  K  T  Y  V  N  N  Y  F  L  Q  S  R  S  D  R  C  T  I  L  V  Q  T  T  R  A  Q  A  R  S  C  L  F  R :   C  Q  S  T  L  E  L  I  W  L  G  *  *  S  T  E  V  C  I  *  R  L  Y  E  A  *  G  V  P  P  T  P  S  *  Q  T  H  A  L  R  D  R  V  N  R  H  F  A  S  M  I  S  S  S  P  S  T  S  G  R  K  N  G  Y  S  I  D  A  I  V  V  I  A  W  S  T  T  T  I  H  R  V  K  P  Q  P  L  T  V  C  S  H  L  Y  L  *  Q  S  K  Y  R  D  G  N  G  T  E  I  S  *  I  F  V  K  L  Y  L  V  C  I  G  S  *  T  R  F  V  *  F  Q  L  L  F  L  V  K </first_frame>
            <second_frame>  K  S  S  T  *  I  K  R  E  P  K  H  Y  Q  C  T  D  R  R  S  C  R  R  S  C  S  G  V  G  R  L  S  S  *  P  W  S  S  D  G  F  W  F  K  Q  R  A  *  E  C  K  K  S  F  T  Y  *  R  R  E  L  K  C  S  C  H  E  A  *  S  L  T  H  E  N  *  R  V  S  G  H  *  Y  E  K  F  G  G  *  K  *  V  P  *  Y  T  H  K  F  Y  P  T  C  G  T  G  H  Y  L  H  T  R  R  R  E  K  D  N  V  F  G  *  E  H  R  R  L  L  P  W  K  F  R  E  G  *  R  L  A  S  L  F  S  R  *  *  F  L  D  Y  V  G  Q  G  M  Y  S  G  E  K  L  N  E  V  T  S  *  D  S  *  K  R  D  I  N  I  S  F  P  R  I  L  S  *  V  F  A  R  H  T  *  T  T  I  S  C  N  P  G  A  T  D  A  L  F  *  F  R  R  R  E  L  K  P  V  A  V  Y  L   : G  V  R  V  L  W  S  *  Y  G  L  D  N  S  P  Q  K  Y  V  F  N  D  Y  M  R  P  K  V  C  L  L  H  P  V  S  K  H  M  L  Y  E  I  E  *  I  D  I  L  L  Q  *  S  L  R  V  L  A  L  A  V  G  R  M  A  I  V  *  M  P  *  *  L  L  H  G  L  L  Q  R  S  T  E  L  N  H  S  L  S  L  S  V  V  T  F  I  Y  N  N  P  N  I  E  M  V  M  V  L  K  S  P  K  Y  L  L  N  Y  I  *  Y  V  L  E  V  R  P  D  S  Y  S  F  S  F  F  F  S  S   </second_frame>
            <third_frame>   R  A  A  R  K  L  R  E  N  Q  S  T  T  S  V  Q  T  E  D  L  V  E  D  P  A  Q  E  S  A  D  Y  H  R  N  L  G  L  Q  M  V  S  G  L  S  N  E  L  E  N  V  R  K  A  S  L  I  D  G  E  N  L  S  A  A  V  M  K  L  N  H  S  L  M  K  T  K  E  F  L  D  T  D  M  R  S  L  E  D  E  S  K  F  R  D  T  L  T  N  F  I  Q  H  A  E  Q  D  I  T  C  I  L  E  E  E  K  K  I  M  S  L  V  K  S  T  G  D  Y  F  H  G  N  S  G  K  D  E  G  L  R  L  F  S  V  V  S  D  F  L  I  M  L  D  K  A  C  T  V  V  R  N  S  T  K  L  P  V  K  I  P  K  K  G  T  L  T  S  P  S  Q  E  S  C  P  E  S  L  Q  D  I  R  K  Q  L  F  P  A  I  Q  E  R  Q  M  H  Y  S  S  S  D  D  E  S  S  S  P  *  L  S  I  *  :  V  S  E  Y  F  G  A  N  M  A  W  I  I  V  H  R  S  M  Y  L  T  T  I  *  G  L  R  C  A  S  Y  T  Q  L  A  N  T  C  S  T  R  *  S  E  *  T  F  C  F  N  D  L  F  E  S  *  H  *  R  *  E  E  W  L  *  Y  R  C  H  S  S  Y  C  M  V  Y  Y  N  D  P  Q  S  *  T  T  A  S  H  C  L  *  S  P  L  S  I  T  I  Q  I  S  R  W  *  W  Y  *  N  L  L  N  I  C  *  I  I  F  S  M  Y  W  K  L  D  Q  I  R  I  V  S  A  S  F  S  R  Q  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="114700" stop="115344"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>642</number_coding_nucleotides>
                  <number_encoded_amino_acids>214</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RAARKLRENQSTTSVQTEDLVEDPAQESADYHRNLGLQMVSGLSNELENVRKASLIDGENLSAAVMKLNHSLMKTKEFLDTDMRSLEDESKFRDTLTNFIQHAEQDITCILEEEKKIMSLVKSTGDYFHGNSGKDEGLRLFSVVSDFLIMLDKACTVVRNSTKLPVKIPKKGTLTSPSQESCPESLQDIRKQLFPAIQERQMHYSSSDDESSSP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="125006" PGL_stop="126465"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="125006" e_stop="126465"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="125006" e_stop="126465" e_length="1460"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125006" stop="126465"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U316533" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAACACTCGAATCGACTGCGAAGTCTAATGCAAAAGGCGAAGACAAGGAATAACGCGATTCCACTTCAAATTCGGATGCTGACCCATCTTCACTTTCAGTATCAGAAGAAGATTAGGGTATGTGTAGAGTTATTAACTGATTTTTGAGTGATAAATCTCTTTTTGACCGAATGATTAATTTTGAATCCTTCACCATTTTTTTCCAAATTCACATCTAATTAAGAACGAGAAATCACACGAAAAAAAGAATTTCCAATTAAAATAACTAATAAGATGTGATTGTTCCGTCCTTCGACCAGTAGTGACTCATAAATTTCACTCGGAATACATGTCTAAATGGGGAAAGTGATTATCCAACTGTAGAAGGGCGCGGCAATCGATTAATACATTCGCTTTTTGTATAAATTGAGAAAAACCCTACACAAAGCTTTCATCTTTTTGTCTCTGCTTCAGCACTCACCATAGACATAGCTGTTGGCCGAATAGCTCTCTTTTCTTGCTTTCAGAAACAATGGCCCCCAAAACCAAATCCCGCTTAGTAGACCAGCCTCCTTCTGCATCGTCCTCTGAAGAACAAGAATTGGTGGAGGAATCCCAGGAAGAAGAAGAAGAACAATCGAGGGAGGAAGAAGGAGAAGAAGAATCAGGGGAAGAAACTGAAGAACCCAAGACAGCACATCCTGTTGTAAAGAGATCCAGCACTCAGAAACTCCAATTTTCTTCTGATTCCGGCAGCGAGAGTGGGTCAGGATCCGAATCCGGACATTCCCTGCCTTCCCCTTCTGCATTGGACTTCACCATCAAGCCCAGTGTTCCTGCTAAAGCTGCCACCCCATCGAAGCCAGCAGCAAAGAGGCCGCAAGATACCCAGACAGAGAAAGGGAGGAAGAAGCCCAAGATTGCAGAAGAAGAGGAGAAAAAATCAGCTGCTACTCCTCGCAATCTATGGAGCGATGACGACCAGCTTGCTCTACTCAAAGGTATTGCTGAATACAAGGCGGTAAAAGGTGTGGAACCTATTGCCGATATGTCTGCTTTTCATGAATTCATCAGGGGGAAGTTGCAGGTTGAAGCTTCAAATAAGAGACTCCGAGACAAGGTAAGGAGGTTAAAGACGAAATATTTGACTAATGTGAAAGATAGTGAGGAGCCAGTTTTCATGAAGGGTCAGGATTATCTAGTTTTTGAGCATTCAAAGAGGATTTGGGGTGCCCCTGGAACTAGTAATGGAGTTAGCACTAATGGCACAGCTAAAATTACTGTTGAGGTTAACAAGAGCTCTGAACCTAAGAGAAGTGCTAAAGTCAGCAAACCCAAGGATGATGAGAAACATAAGGAAGAAGAGAAACAGGTTGCTGTAAAAGAGGTGGTTAAGGAGGATATAGTTAAGGGTGATCAACAGGATTTCCAGTCTGAATTTCCACATTTGACTGCTTCATTTGAAAGTATGGCTGGCATGT</gDNA_template>
            <first_frame> E  H  S  N  R  L  R  S  L  M  Q  K  A  K  T  R  N  N  A  I  P  L  Q  I  R  M  L  T  H  L  H  F  Q  Y  Q  K  K  I  R  V  C  V  E  L  L  T  D  F  *  V  I  N  L  F  L  T  E  *  L  I  L  N  P  S  P  F  F  S  K  F  T  S  N  *  E  R  E  I  T  R  K  K  E  F  P  I  K  I  T  N  K  M  *  L  F  R  P  S  T  S  S  D  S  *  I  S  L  G  I  H  V  *  M  G  K  V  I  I  Q  L  *  K  G  A  A  I  D  *  Y  I  R  F  L  Y  K  L  R  K  T  L  H  K  A  F  I  F  L  S  L  L  Q  H  S  P  *  T  *  L  L  A  E  *  L  S  F  L  A  F  R  N  N  G  P  Q  N  Q  I  P  L  S  R  P  A  S  F  C  I  V  L  *  R  T  R  I  G  G  G  I  P  G  R  R  R  R  T  I  E  G  G  R  R  R  R  R  I  R  G  R  N  *  R  T  Q  D  S  T  S  C  C  K  E  I  Q  H  S  E  T  P  I  F  F  *  F  R  Q  R  E  W  V  R  I  R  I  R  T  F  P  A  F  P  F  C  I  G  L  H  H  Q  A  Q  C  S  C  *  S  C  H  P  I  E  A  S  S  K  E  A  A  R  Y  P  D  R  E  R  E  E  E  A  Q  D  C  R  R  R  G  E  K  I  S  C  Y  S  S  Q  S  M  E  R  *  R  P  A  C  S  T  Q  R  Y  C  *  I  Q  G  G  K  R  C  G  T  Y  C  R  Y  V  C  F  S  *  I  H  Q  G  E  V  A  G  *  S  F  K  *  E  T  P  R  Q  G  K  E  V  K  D  E  I  F  D  *  C  E  R  *  *  G  A  S  F  H  E  G  S  G  L  S  S  F  *  A  F  K  E  D  L  G  C  P  W  N  *  *  W  S  *  H  *  W  H  S  *  N  Y  C  *  G  *  Q  E  L  *  T  *  E  K  C  *  S  Q  Q  T  Q  G  *  *  E  T  *  G  R  R  E  T  G  C  C  K  R  G  G  *  G  G  Y  S  *  G  *  S  T  G  F  P  V  *  I  S  T  F  D  C  F  I  *  K  Y  G  W  H   </first_frame>
            <second_frame>  N  T  R  I  D  C  E  V  *  C  K  R  R  R  Q  G  I  T  R  F  H  F  K  F  G  C  *  P  I  F  T  F  S  I  R  R  R  L  G  Y  V  *  S  Y  *  L  I  F  E  *  *  I  S  F  *  P  N  D  *  F  *  I  L  H  H  F  F  P  N  S  H  L  I  K  N  E  K  S  H  E  K  K  N  F  Q  L  K  *  L  I  R  C  D  C  S  V  L  R  P  V  V  T  H  K  F  H  S  E  Y  M  S  K  W  G  K  *  L  S  N  C  R  R  A  R  Q  S  I  N  T  F  A  F  C  I  N  *  E  K  P  Y  T  K  L  S  S  F  C  L  C  F  S  T  H  H  R  H  S  C  W  P  N  S  S  L  F  L  L  S  E  T  M  A  P  K  T  K  S  R  L  V  D  Q  P  P  S  A  S  S  S  E  E  Q  E  L  V  E  E  S  Q  E  E  E  E  E  Q  S  R  E  E  E  G  E  E  E  S  G  E  E  T  E  E  P  K  T  A  H  P  V  V  K  R  S  S  T  Q  K  L  Q  F  S  S  D  S  G  S  E  S  G  S  G  S  E  S  G  H  S  L  P  S  P  S  A  L  D  F  T  I  K  P  S  V  P  A  K  A  A  T  P  S  K  P  A  A  K  R  P  Q  D  T  Q  T  E  K  G  R  K  K  P  K  I  A  E  E  E  E  K  K  S  A  A  T  P  R  N  L  W  S  D  D  D  Q  L  A  L  L  K  G  I  A  E  Y  K  A  V  K  G  V  E  P  I  A  D  M  S  A  F  H  E  F  I  R  G  K  L  Q  V  E  A  S  N  K  R  L  R  D  K  V  R  R  L  K  T  K  Y  L  T  N  V  K  D  S  E  E  P  V  F  M  K  G  Q  D  Y  L  V  F  E  H  S  K  R  I  W  G  A  P  G  T  S  N  G  V  S  T  N  G  T  A  K  I  T  V  E  V  N  K  S  S  E  P  K  R  S  A  K  V  S  K  P  K  D  D  E  K  H  K  E  E  E  K  Q  V  A  V  K  E  V  V  K  E  D  I  V  K  G  D  Q  Q  D  F  Q  S  E  F  P  H  L  T  A  S  F  E  S  M  A  G  M  </second_frame>
            <third_frame>   T  L  E  S  T  A  K  S  N  A  K  G  E  D  K  E  *  R  D  S  T  S  N  S  D  A  D  P  S  S  L  S  V  S  E  E  D  *  G  M  C  R  V  I  N  *  F  L  S  D  K  S  L  F  D  R  M  I  N  F  E  S  F  T  I  F  F  Q  I  H  I  *  L  R  T  R  N  H  T  K  K  R  I  S  N  *  N  N  *  *  D  V  I  V  P  S  F  D  Q  *  *  L  I  N  F  T  R  N  T  C  L  N  G  E  S  D  Y  P  T  V  E  G  R  G  N  R  L  I  H  S  L  F  V  *  I  E  K  N  P  T  Q  S  F  H  L  F  V  S  A  S  A  L  T  I  D  I  A  V  G  R  I  A  L  F  S  C  F  Q  K  Q  W  P  P  K  P  N  P  A  *  *  T  S  L  L  L  H  R  P  L  K  N  K  N  W  W  R  N  P  R  K  K  K  K  N  N  R  G  R  K  K  E  K  K  N  Q  G  K  K  L  K  N  P  R  Q  H  I  L  L  *  R  D  P  A  L  R  N  S  N  F  L  L  I  P  A  A  R  V  G  Q  D  P  N  P  D  I  P  C  L  P  L  L  H  W  T  S  P  S  S  P  V  F  L  L  K  L  P  P  H  R  S  Q  Q  Q  R  G  R  K  I  P  R  Q  R  K  G  G  R  S  P  R  L  Q  K  K  R  R  K  N  Q  L  L  L  L  A  I  Y  G  A  M  T  T  S  L  L  Y  S  K  V  L  L  N  T  R  R  *  K  V  W  N  L  L  P  I  C  L  L  F  M  N  S  S  G  G  S  C  R  L  K  L  Q  I  R  D  S  E  T  R  *  G  G  *  R  R  N  I  *  L  M  *  K  I  V  R  S  Q  F  S  *  R  V  R  I  I  *  F  L  S  I  Q  R  G  F  G  V  P  L  E  L  V  M  E  L  A  L  M  A  Q  L  K  L  L  L  R  L  T  R  A  L  N  L  R  E  V  L  K  S  A  N  P  R  M  M  R  N  I  R  K  K  R  N  R  L  L  *  K  R  W  L  R  R  I  *  L  R  V  I  N  R  I  S  S  L  N  F  H  I  *  L  L  H  L  K  V  W  L  A  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125415" stop="126464"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1050</number_coding_nucleotides>
                  <number_encoded_amino_acids>350</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EKPYTKLSSFCLCFSTHHRHSCWPNSSLFLLSETMAPKTKSRLVDQPPSASSSEEQELVEESQEEEEEQSREEEGEEESGEETEEPKTAHPVVKRSSTQKLQFSSDSGSESGSGSESGHSLPSPSALDFTIKPSVPAKAATPSKPAAKRPQDTQTEKGRKKPKIAEEEEKKSAATPRNLWSDDDQLALLKGIAEYKAVKGVEPIADMSAFHEFIRGKLQVEASNKRLRDKVRRLKTKYLTNVKDSEEPVFMKGQDYLVFEHSKRIWGAPGTSNGVSTNGTAKITVEVNKSSEPKRSAKVSKPKDDEKHKEEEKQVAVKEVVKEDIVKGDQQDFQSEFPHLTASFESMAGM</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="136388" PGL_stop="137826"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="136388" e_stop="137826"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="136388" e_stop="137826" e_length="1439"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="136388" stop="137826"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U316532" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTTGTCTTTGCTTCATCACTCACCATAGACACCGACGACGGCCGAATAGCTCTCTCTTCTTGCTTTCAGAAACAATGGCCCCCAAAACCAAATCCCGCTTAGTAGACCAACCTCCTTCTGCATCATCTTCTGAAGAACAAGAATTGGTGGAGGAATGCCAGGAAGAAGAAGAACAACAACAACAATCGAGGGAAGAAACTGAAGAAGAAGAAGAACCTCCAGTTGTGAAGAGATCCATCACTCAGAAACCAGTCAAAACCGCTCAGAAGCTCCAATTTTCTTCTGAGTCCGACAGCGAGAATGGGTCAGGTTCCGAATCGAAAAAATCGGATCATTCCCCGCCTTCCCCTTTTGTATCAGATTTCACCATTAAGCCGATTGTTTCTGCCCCATCGAAATCAGCAGGAAAGAGGCCGCAAGAAGCCCAGAAAGAGAAAGGGAGGAAGAAGCCCAAGATTGCTGAAGAAGAGGATAAAAAATCAGCTGCTACTCCTCGCAGTCTATGGAGCGATGACGACCAGCTTGCTCTGCTCAAAGGTATTGCTGAATACAAGACGGTAAAAGGCATGGAACCTAATGCGGATATGACAGCTTTTCATGAATTCATTAGAGGAAAGTTGCAGGTTGAGGTTTCAAAGAGTCAACTCAGTGAAAAGATAAAGAGGTTAAAGAAGAAATTTTTTACTAATGCGAAAGGTGATGAGGAGCCAGTTTTCATGAAGGGTCAGGATTTTTTAGTTTTTCAGCATTCAAAGAGGATTTGGGGTGCCCCTGGAACTAGTAGTGGAGTTAAGGAGATTGTTACCAATAGCACTAATGGCAAAGCTAAAAAGACTGTTGAGGCTAAGAAGAGTTCTGAACCTAAGAAAAGTGGTAAAGTTAGCAAACACAAGGATGATGAGGAACATAAGGAAGAAGAGAAACAGGTTGCTGTTAAAGAGGTGGTTAAAGAGGATATAGTTAAGGGTGATCAACAGGATTTCCAATCCGAATATCCACGTTTGGCTGCATCATTTGAAAGTATGTCTGGCATGTTTACTATTTACCCAAATGGAACAAGTTTTTTGAAGGAAAAGATGAGTTTGATTGCTCCTGACAAGGCTAAAGTATTGGAGGAGAAGTGGAAGAAACTGGAGGATGATGAAGCTGCCTTGATGGTGAAGCGCTTAGATTTGATTGCGGAGCATTACAGATTGGTGGTTGATGCAATGAGAGGTAACTAGATGCTGATGGATGATGTTTCTATTTCGAACCGACAAGTTCTGATACTGTTTTGGTGGACTTTTAGATTTTGTTTCATGTAGTCTTGTTTCTCAAGGCAATTTCTTCTCGCGTTGATGTACTAATGTTTAGTCGGCGAGGTAGATTTAGTTTTTCAGGTTGATTCATACATTTTATTGCTTCTTTAGTTTTACTAGTGAACTGTTTGGATGATGA</gDNA_template>
            <first_frame> F  L  S  L  L  H  H  S  P  *  T  P  T  T  A  E  *  L  S  L  L  A  F  R  N  N  G  P  Q  N  Q  I  P  L  S  R  P  T  S  F  C  I  I  F  *  R  T  R  I  G  G  G  M  P  G  R  R  R  T  T  T  T  I  E  G  R  N  *  R  R  R  R  T  S  S  C  E  E  I  H  H  S  E  T  S  Q  N  R  S  E  A  P  I  F  F  *  V  R  Q  R  E  W  V  R  F  R  I  E  K  I  G  S  F  P  A  F  P  F  C  I  R  F  H  H  *  A  D  C  F  C  P  I  E  I  S  R  K  E  A  A  R  S  P  E  R  E  R  E  E  E  A  Q  D  C  *  R  R  G  *  K  I  S  C  Y  S  S  Q  S  M  E  R  *  R  P  A  C  S  A  Q  R  Y  C  *  I  Q  D  G  K  R  H  G  T  *  C  G  Y  D  S  F  S  *  I  H  *  R  K  V  A  G  *  G  F  K  E  S  T  Q  *  K  D  K  E  V  K  E  E  I  F  Y  *  C  E  R  *  *  G  A  S  F  H  E  G  S  G  F  F  S  F  S  A  F  K  E  D  L  G  C  P  W  N  *  *  W  S  *  G  D  C  Y  Q  *  H  *  W  Q  S  *  K  D  C  *  G  *  E  E  F  *  T  *  E  K  W  *  S  *  Q  T  Q  G  *  *  G  T  *  G  R  R  E  T  G  C  C  *  R  G  G  *  R  G  Y  S  *  G  *  S  T  G  F  P  I  R  I  S  T  F  G  C  I  I  *  K  Y  V  W  H  V  Y  Y  L  P  K  W  N  K  F  F  E  G  K  D  E  F  D  C  S  *  Q  G  *  S  I  G  G  E  V  E  E  T  G  G  *  *  S  C  L  D  G  E  A  L  R  F  D  C  G  A  L  Q  I  G  G  *  C  N  E  R  *  L  D  A  D  G  *  C  F  Y  F  E  P  T  S  S  D  T  V  L  V  D  F  *  I  L  F  H  V  V  L  F  L  K  A  I  S  S  R  V  D  V  L  M  F  S  R  R  G  R  F  S  F  S  G  *  F  I  H  F  I  A  S  L  V  L  L  V  N  C  L  D  D   </first_frame>
            <second_frame>  F  C  L  C  F  I  T  H  H  R  H  R  R  R  P  N  S  S  L  F  L  L  S  E  T  M  A  P  K  T  K  S  R  L  V  D  Q  P  P  S  A  S  S  S  E  E  Q  E  L  V  E  E  C  Q  E  E  E  E  Q  Q  Q  Q  S  R  E  E  T  E  E  E  E  E  P  P  V  V  K  R  S  I  T  Q  K  P  V  K  T  A  Q  K  L  Q  F  S  S  E  S  D  S  E  N  G  S  G  S  E  S  K  K  S  D  H  S  P  P  S  P  F  V  S  D  F  T  I  K  P  I  V  S  A  P  S  K  S  A  G  K  R  P  Q  E  A  Q  K  E  K  G  R  K  K  P  K  I  A  E  E  E  D  K  K  S  A  A  T  P  R  S  L  W  S  D  D  D  Q  L  A  L  L  K  G  I  A  E  Y  K  T  V  K  G  M  E  P  N  A  D  M  T  A  F  H  E  F  I  R  G  K  L  Q  V  E  V  S  K  S  Q  L  S  E  K  I  K  R  L  K  K  K  F  F  T  N  A  K  G  D  E  E  P  V  F  M  K  G  Q  D  F  L  V  F  Q  H  S  K  R  I  W  G  A  P  G  T  S  S  G  V  K  E  I  V  T  N  S  T  N  G  K  A  K  K  T  V  E  A  K  K  S  S  E  P  K  K  S  G  K  V  S  K  H  K  D  D  E  E  H  K  E  E  E  K  Q  V  A  V  K  E  V  V  K  E  D  I  V  K  G  D  Q  Q  D  F  Q  S  E  Y  P  R  L  A  A  S  F  E  S  M  S  G  M  F  T  I  Y  P  N  G  T  S  F  L  K  E  K  M  S  L  I  A  P  D  K  A  K  V  L  E  E  K  W  K  K  L  E  D  D  E  A  A  L  M  V  K  R  L  D  L  I  A  E  H  Y  R  L  V  V  D  A  M  R  G  N  *  M  L  M  D  D  V  S  I  S  N  R  Q  V  L  I  L  F  W  W  T  F  R  F  C  F  M  *  S  C  F  S  R  Q  F  L  L  A  L  M  Y  *  C  L  V  G  E  V  D  L  V  F  Q  V  D  S  Y  I  L  L  L  L  *  F  Y  *  *  T  V  W  M  M  </second_frame>
            <third_frame>   F  V  F  A  S  S  L  T  I  D  T  D  D  G  R  I  A  L  S  S  C  F  Q  K  Q  W  P  P  K  P  N  P  A  *  *  T  N  L  L  L  H  H  L  L  K  N  K  N  W  W  R  N  A  R  K  K  K  N  N  N  N  N  R  G  K  K  L  K  K  K  K  N  L  Q  L  *  R  D  P  S  L  R  N  Q  S  K  P  L  R  S  S  N  F  L  L  S  P  T  A  R  M  G  Q  V  P  N  R  K  N  R  I  I  P  R  L  P  L  L  Y  Q  I  S  P  L  S  R  L  F  L  P  H  R  N  Q  Q  E  R  G  R  K  K  P  R  K  R  K  G  G  R  S  P  R  L  L  K  K  R  I  K  N  Q  L  L  L  L  A  V  Y  G  A  M  T  T  S  L  L  C  S  K  V  L  L  N  T  R  R  *  K  A  W  N  L  M  R  I  *  Q  L  F  M  N  S  L  E  E  S  C  R  L  R  F  Q  R  V  N  S  V  K  R  *  R  G  *  R  R  N  F  L  L  M  R  K  V  M  R  S  Q  F  S  *  R  V  R  I  F  *  F  F  S  I  Q  R  G  F  G  V  P  L  E  L  V  V  E  L  R  R  L  L  P  I  A  L  M  A  K  L  K  R  L  L  R  L  R  R  V  L  N  L  R  K  V  V  K  L  A  N  T  R  M  M  R  N  I  R  K  K  R  N  R  L  L  L  K  R  W  L  K  R  I  *  L  R  V  I  N  R  I  S  N  P  N  I  H  V  W  L  H  H  L  K  V  C  L  A  C  L  L  F  T  Q  M  E  Q  V  F  *  R  K  R  *  V  *  L  L  L  T  R  L  K  Y  W  R  R  S  G  R  N  W  R  M  M  K  L  P  *  W  *  S  A  *  I  *  L  R  S  I  T  D  W  W  L  M  Q  *  E  V  T  R  C  *  W  M  M  F  L  F  R  T  D  K  F  *  Y  C  F  G  G  L  L  D  F  V  S  C  S  L  V  S  Q  G  N  F  F  S  R  *  C  T  N  V  *  S  A  R  *  I  *  F  F  R  L  I  H  T  F  Y  C  F  F  S  F  T  S  E  L  F  G  *  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLm0137M12.2" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="136389" stop="137612"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1221</number_coding_nucleotides>
                  <number_encoded_amino_acids>407</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FCLCFITHHRHRRRPNSSLFLLSETMAPKTKSRLVDQPPSASSSEEQELVEECQEEEEQQQQSREETEEEEEPPVVKRSITQKPVKTAQKLQFSSESDSENGSGSESKKSDHSPPSPFVSDFTIKPIVSAPSKSAGKRPQEAQKEKGRKKPKIAEEEDKKSAATPRSLWSDDDQLALLKGIAEYKTVKGMEPNADMTAFHEFIRGKLQVEVSKSQLSEKIKRLKKKFFTNAKGDEEPVFMKGQDFLVFQHSKRIWGAPGTSSGVKEIVTNSTNGKAKKTVEAKKSSEPKKSGKVSKHKDDEEHKEEEKQVAVKEVVKEDIVKGDQQDFQSEYPRLAASFESMSGMFTIYPNGTSFLKEKMSLIAPDKAKVLEEKWKKLEDDEAALMVKRLDLIAEHYRLVVDAMRGN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 26 chains have been computed
$ 
$ memory statistics:
$ 32264 bytes spliced alignments in total
$ 15 spliced alignments have been stored
$ 2150 bytes was the average size of a spliced alignment
$ 19856 bytes predicted gene locations in total
$ 12 predicted gene locations have been stored
$ 1654 bytes was the average size of a predicted gene location
$ 3 megabytes was the average size of the backtrace matrix
$ 31 backtrace matrices have been allocated
$ 
$ date finished: 2008-11-23 23:16:33
-->
