<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-15 12:48:50"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E395398" ref_strand="+" ref_description="SGN-E395398 [TUS-16-E20](-)">
      <seq>ggggtggttactccatatcaaagaaaatagttatttcgaacaaccataaattagtttgaagtttgaaccatatagcgaacctgtgtagtttgtagatgttttattcacagcagcaagagatgggagataacttagtttgaagcatatagcaaacctcataaatccaagtgtctaagtatttatggtgatagttttaaaaattaccaaacatagtaaatccctaacaactattgattgattagggctgttataccaacttataatctaagctttattttacttgtatttgttgctcaagccactttgagctgattgaacaaaaccaattgctacacaagattgatttatgttgttatatatatatattgctctctaacatttacgttgcttcttatttgggagctacacttgaagaaagtgaaaattgagagcaattgggaagatattagcagtttatatctatgaagtttccttttaagagttctcttttattttcgatcaaacctcctatccaggggcggagctacagtgttatgtggggaaagagtttggacgaattcaattacttttctataacttctatatttgtattagaaaatcgaataactaaacaaaaatattttacataattggatgattcattggtaagtaagaggctaccacattaatcaatattttctccttttcagcaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="11247" stop="9954"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10947" g_stop="10257" g_length="691"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="691" r_length="691" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="692" polyA_stop="703"/>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E395398" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>691</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E395398" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10947" e_stop="10257"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGGTGGTTACTCCATATCAAAGAAAATAGTTATTTCGAACAACCATAAATTAGTTTGAAGTTTGAACCATATAGCGAACCTGTGTAGTTTGTAGATGTTTTATTCACAGCAGCAAGAGATGGGAGATAACTTAGTTTGAAGCATATAGCAAACCTCATAAATCCAAGTGTCTAAGTATTTATGGTGATAGTTTTAAAAATTACCAAACATAGTAAATCCCTAACAACTATTGATTGATTAGGGCTGTTATACCAACTTATAATCTAAGCTTTATTTTACTTGTATTTGTTGCTCAAGCCACTTTGAGCTGATTGAACAAAACCAATTGCTACACAAGATTGATTTATGTTGTTATATATATATATTGCTCTCTAACATTTACGTTGCTTCTTATTTGGGAGCTACACTTGAAGAAAGTGAAAATTGAGAGCAATTGGGAAGATATTAGCAGTTTATATCTATGAAGTTTCCTTTTAAGAGTTCTCTTTTATTTTCGATCAAACCTCCTATCCAGGGGCGGAGCTACAGTGTTATGTGGGGAAAGAGTTTGGACGAATTCAATTACTTTTCTATAACTTCTATATTTGTATTAGAAAATCGAATAACTAAACAAAAATATTTTACATAATTGGATGATTCATTGGTAAGTAAGAGGCTACCACATTAATCAATATTTTCTCCTTTTCAGCA</genome_strand>
        <mrna_strand>GGGGTGGTTACTCCATATCAAAGAAAATAGTTATTTCGAACAACCATAAATTAGTTTGAAGTTTGAACCATATAGCGAACCTGTGTAGTTTGTAGATGTTTTATTCACAGCAGCAAGAGATGGGAGATAACTTAGTTTGAAGCATATAGCAAACCTCATAAATCCAAGTGTCTAAGTATTTATGGTGATAGTTTTAAAAATTACCAAACATAGTAAATCCCTAACAACTATTGATTGATTAGGGCTGTTATACCAACTTATAATCTAAGCTTTATTTTACTTGTATTTGTTGCTCAAGCCACTTTGAGCTGATTGAACAAAACCAATTGCTACACAAGATTGATTTATGTTGTTATATATATATATTGCTCTCTAACATTTACGTTGCTTCTTATTTGGGAGCTACACTTGAAGAAAGTGAAAATTGAGAGCAATTGGGAAGATATTAGCAGTTTATATCTATGAAGTTTCCTTTTAAGAGTTCTCTTTTATTTTCGATCAAACCTCCTATCCAGGGGCGGAGCTACAGTGTTATGTGGGGAAAGAGTTTGGACGAATTCAATTACTTTTCTATAACTTCTATATTTGTATTAGAAAATCGAATAACTAAACAAAAATATTTTACATAATTGGATGATTCATTGGTAAGTAAGAGGCTACCACATTAATCAATATTTTCTCCTTTTCAGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E341238" ref_strand="+" ref_description="SGN-E341238 [cTOE-22-G8]">
      <seq>caatctctactaaaatcccttataaactctctatctattcctactcctgccttcctcccaaatcctttaaccccagatgatattcatccataaaactcatcagagataaatcctttaaccccagatgatattcatccataaaactcatcagagatttccagatctgtacagttgatgaccatggatcagtccattttcagatctttgattgaatggtttagattgattcaattaaagattgatgttcgcatatcctcgaagcagaaagtgaaaattgagagcaattgggaagatattagcagtttatatctatgaagtttccttttaagagttctcttttattttcgatcaaacctcctatccaggggcggagctacagtgttatgtggggaaagagtttggacgaattcaattacttttctataacttctatatttgtattagaaaatcgaataactaaacaaaaatattttacataattggatgattcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="12955" stop="10006"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12655" g_stop="12392" g_length="264"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="264" r_length="264" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12391" i_stop="10534" i_length="1858">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10533" g_stop="10306" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="265" r_stop="492" r_length="228" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E341238" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>492</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E341238" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12655" e_stop="12392"/>
          <exon e_start="10533" e_stop="10306"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATCTCTACTAAAATCCCTTATAAACTCTCTATCTATTCCTACTCCTGCCTTCCTCCCAAATCCTTTAACCCCAGATGATATTCATCCATAAAACTCATCAGAGATAAATCCTTTAACCCCAGATGATATTCATCCATAAAACTCATCAGAGATTTCCAGATCTGTACAGTTGATGACCATGGATCAGTCCATTTTCAGATCTTTGATTGAATGGTTTAGATTGATTCAATTAAAGATTGATGTTCGCATATCCTCGAAGCAGGTTCGAATCTTAATTTTTATAAACAATTATTGTTTAAGTTTATGTCTTTGCTTTCATCTTTATCTGTGTATACTGAGGATGAACCATATACTTGATGTTTATATCTACTAGTATTGTTTATGAAATAAAAGTGAAATTAATGAATATCTTGTGTTAGTTTGACTGGAGGCAGTTTTCAATCTACTTGATTTACTATTTTATGTCCCCTTATTTTTTGCATATCTTGTTTCCTTGCTTTGAACATCTAGACGAGTGAAGCAACGCTTAGATGGTTTAGGCATGTGTACAGGAAGCGCATAGACATCCGGTGAGAAAGTGCAATAGGTTGATAGCAAGGGGTAGAGATAAACAAAAAAAGTATTAATGAAGTGATTAGATATGACATAAAACAACTTTATTTTGTCAAGTACATGACTCTAGATAAGGAGTGAGGGTCGACTATTTGGGTAGAAGGTTAGTAGGTTGAAGTGTTATCCTGCATTGCAAAGGTTTATGCCTGTTAGGGTATGTTTTAGTACTTGTTACCCTTGTGATTCTTGTCATATGTCGTTTATTGTGTTTTAATTATCGCATTGTTTTATTGTTCTTATAGTTTTTTTCTTGTAAATTTCACACTACTTTCTTTTTAACTGTTACGTTTTCTTTATTGTTTTTATTTCTTTTACTTTGATTTGATGCGTACAGTCGAGAATTCTTCGAAAATAGTCTTTCTAGCTTCTTGAGGTAGTGGTGAGTTGCGTACACTATACACTCTCAGTCCCCACTTAGTGGAATTTCTCTGTGAATGTTGTTGTTGTATAGGATGTTGAATGAATGCAATTATGAAAGAAAAGAAAAATACAACAACAATATACATAGTGAAATTCCACAAGAAAGGTTTTGGAAGGGTAGAGTATATGTAGACCTTACCATTACCTCGTGGAGGTAGAAATGTTTTCAAAAGAGTCTCGGCTCAAGTGCAACAAATTCTAGTGCAAGAATTAATAAAACAATATAACAAAACATAATAATTACCAGGAAAGTGGTGGAAATCCTACAAGAATAACAAAATAATGCGATAATTAAAACTCTAGTAAAAACATATGACAATAGATGTTAAAAGCAAGAAGTACAATAATACGGCTAGTACAAGACAAACATAAACTCGTGAAAAGCAAGAGAACACTCCACTACCATCTACCCTAGTACCTATCCTCCAGACTCTCTTATCTAAGGTCATGTCCTCGACAACTTGAAGGTGTGTCATGTCATGTCTAATCACCTATCTCCAACACTTCTTTGACCTACCTCTCCCTATACCTAGTATGACCAGCCTTTTGCACTTCCTTAGTAAACGTGTGCACATCTCTTCACATTTCCAAACCATTTCAATCAGACTTTTTTTGTCAAAGAAAGTTACAAAGTGCAAAATAACACAATACCATACTCTATTTTTTTTTTGGAAGGGGTGGTTACTCCATATCAAAGAAAATAGTTATTTCGAACAACCATAAATTAGTTTGAAGTTTGAACCATATAGCGAACCTGTGTAGTTTGTAGATGTTTTATTCACAGCAGCAAGAGATGGGAGATAACTTAGTTTGAAGCATATAGCAAACCTCATAAATCCAAGTGTCTAAGTATTTATGGTGATAGTTTTAAAAATTACCAAACATAGTAAATCCCTAACAACTATTGATTGATTAGGGCTGTTATACCAACTTATAATCTAAGCTTTATTTTACTTGTATTTGTTGCTCAAGCCACTTTGAGCTGATTGAACAAAACCAATTGCTACACAAGATTGATTTATGTTGTTATATATATATATTGCTCTCTAACATTTACGTTGCTTCTTATTTGGGAGCTACACTTGAAGAAAGTGAAAATTGAGAGCAATTGGGAAGATATTAGCAGTTTATATCTATGAAGTTTCCTTTTAAGAGTTCTCTTTTATTTTCGATCAAACCTCCTATCCAGGGGCGGAGCTACAGTGTTATGTGGGGAAAGAGTTTGGACGAATTCAATTACTTTTCTATAACTTCTATATTTGTATTAGAAAATCGAATAACTAAACAAAAATATTTTACATAATTGGATGATTCAT</genome_strand>
        <mrna_strand>CAATCTCTACTAAAATCCCTTATAAACTCTCTATCTATTCCTACTCCTGCCTTCCTCCCAAATCCTTTAACCCCAGATGATATTCATCCATAAAACTCATCAGAGATAAATCCTTTAACCCCAGATGATATTCATCCATAAAACTCATCAGAGATTTCCAGATCTGTACAGTTGATGACCATGGATCAGTCCATTTTCAGATCTTTGATTGAATGGTTTAGATTGATTCAATTAAAGATTGATGTTCGCATATCCTCGAAGCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTGAAAATTGAGAGCAATTGGGAAGATATTAGCAGTTTATATCTATGAAGTTTCCTTTTAAGAGTTCTCTTTTATTTTCGATCAAACCTCCTATCCAGGGGCGGAGCTACAGTGTTATGTGGGGAAAGAGTTTGGACGAATTCAATTACTTTTCTATAACTTCTATATTTGTATTAGAAAATCGAATAACTAAACAAAAATATTTTACATAATTGGATGATTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E255167" ref_strand="+" ref_description="SGN-E255167 [cLEG-31-A6]">
      <seq>tgaaaagcaagagaacactccactaccatctaccctagtacctatcctccagactctcttatctaaggtcatgtcctcgacaacttgaaggtgtgtcatgtcatgtctaatcacctatctccaacacttctttgacctacctctccctatacctagtatgaccagccttttgcacttccttagtaaacgtgtgcacatctcttcacatttccaaaccatttcaatcagactttttttgtcaaagaaagttacaaagtgcaaaataacacaataccatactctattttttttttggaaggggtggttactccatatcaaagaaaatagttatttcgaacaaccataaattagtttgaagtttgaaccatatagcgaacctgtgtagtttgtagatgttttattcacagcagcaagagatgggagataacttagtttgaagcatatagcaaacctcataaatccaagtgtctaagtatttatggtgatagttttaaaaattaccaaacatagtaaatccctaacaactattgattgattagggctgttataccaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="11544" stop="10391"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11244" g_stop="10691" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="554" r_length="554" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E255167" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E255167" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11244" e_stop="10691"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAAAGCAAGAGAACACTCCACTACCATCTACCCTAGTACCTATCCTCCAGACTCTCTTATCTAAGGTCATGTCCTCGACAACTTGAAGGTGTGTCATGTCATGTCTAATCACCTATCTCCAACACTTCTTTGACCTACCTCTCCCTATACCTAGTATGACCAGCCTTTTGCACTTCCTTAGTAAACGTGTGCACATCTCTTCACATTTCCAAACCATTTCAATCAGACTTTTTTTGTCAAAGAAAGTTACAAAGTGCAAAATAACACAATACCATACTCTATTTTTTTTTTGGAAGGGGTGGTTACTCCATATCAAAGAAAATAGTTATTTCGAACAACCATAAATTAGTTTGAAGTTTGAACCATATAGCGAACCTGTGTAGTTTGTAGATGTTTTATTCACAGCAGCAAGAGATGGGAGATAACTTAGTTTGAAGCATATAGCAAACCTCATAAATCCAAGTGTCTAAGTATTTATGGTGATAGTTTTAAAAATTACCAAACATAGTAAATCCCTAACAACTATTGATTGATTAGGGCTGTTATACCAAC</genome_strand>
        <mrna_strand>TGAAAAGCAAGAGAACACTCCACTACCATCTACCCTAGTACCTATCCTCCAGACTCTCTTATCTAAGGTCATGTCCTCGACAACTTGAAGGTGTGTCATGTCATGTCTAATCACCTATCTCCAACACTTCTTTGACCTACCTCTCCCTATACCTAGTATGACCAGCCTTTTGCACTTCCTTAGTAAACGTGTGCACATCTCTTCACATTTCCAAACCATTTCAATCAGACTTTTTTTGTCAAAGAAAGTTACAAAGTGCAAAATAACACAATACCATACTCTATTTTTTTTTTGGAAGGGGTGGTTACTCCATATCAAAGAAAATAGTTATTTCGAACAACCATAAATTAGTTTGAAGTTTGAACCATATAGCGAACCTGTGTAGTTTGTAGATGTTTTATTCACAGCAGCAAGAGATGGGAGATAACTTAGTTTGAAGCATATAGCAAACCTCATAAATCCAAGTGTCTAAGTATTTATGGTGATAGTTTTAAAAATTACCAAACATAGTAAATCCCTAACAACTATTGATTGATTAGGGCTGTTATACCAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E341666" ref_strand="+" ref_description="SGN-E341666 [cTOE-23-J8]">
      <seq>tagaccttaccattacctcgtggaggtagaaatgttttcaaaagagtctcggctcaagtgcaacaaattctagtgcaagaattaataaaacaatataacaaaacataataattaccaggaaagtggtggaaatcctacaagaataacaaaataatgcgataattaaaactctagtaaaaacatatgacaatagatgttaaaagcaagaagtacaataatacggctagtacaagacaaacataaactcgtgaaaagcaagagaacactccactaccatctaccctagtacctatcctccagactctcttatctaaggtcatgtcctcgacaacttgaaggtgtgtcatgtcatgtctaatcacctatctccaacacttctttgacctacctctccctatacctagtatgaccagccttttgcacttccttagtaaacgtgtgcacatctcttcacatttccaaaccatttcaatcagactttttttgtcaaagaaagttacaaagtgcaaaataacacaataccatactctattttttttttggaaggggtggttactccatatcaaagaaaatagttatttcgaacaaccataaattagtttgaagtttgaaccatatagcgaacctgtgtagtttgtagatgttttattcacagcagcaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="11792" stop="10531"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11492" g_stop="10831" g_length="662"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="662" r_length="662" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E341666" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>662</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E341666" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11492" e_stop="10831"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGACCTTACCATTACCTCGTGGAGGTAGAAATGTTTTCAAAAGAGTCTCGGCTCAAGTGCAACAAATTCTAGTGCAAGAATTAATAAAACAATATAACAAAACATAATAATTACCAGGAAAGTGGTGGAAATCCTACAAGAATAACAAAATAATGCGATAATTAAAACTCTAGTAAAAACATATGACAATAGATGTTAAAAGCAAGAAGTACAATAATACGGCTAGTACAAGACAAACATAAACTCGTGAAAAGCAAGAGAACACTCCACTACCATCTACCCTAGTACCTATCCTCCAGACTCTCTTATCTAAGGTCATGTCCTCGACAACTTGAAGGTGTGTCATGTCATGTCTAATCACCTATCTCCAACACTTCTTTGACCTACCTCTCCCTATACCTAGTATGACCAGCCTTTTGCACTTCCTTAGTAAACGTGTGCACATCTCTTCACATTTCCAAACCATTTCAATCAGACTTTTTTTGTCAAAGAAAGTTACAAAGTGCAAAATAACACAATACCATACTCTATTTTTTTTTTGGAAGGGGTGGTTACTCCATATCAAAGAAAATAGTTATTTCGAACAACCATAAATTAGTTTGAAGTTTGAACCATATAGCGAACCTGTGTAGTTTGTAGATGTTTTATTCACAGCAGCAAG</genome_strand>
        <mrna_strand>TAGACCTTACCATTACCTCGTGGAGGTAGAAATGTTTTCAAAAGAGTCTCGGCTCAAGTGCAACAAATTCTAGTGCAAGAATTAATAAAACAATATAACAAAACATAATAATTACCAGGAAAGTGGTGGAAATCCTACAAGAATAACAAAATAATGCGATAATTAAAACTCTAGTAAAAACATATGACAATAGATGTTAAAAGCAAGAAGTACAATAATACGGCTAGTACAAGACAAACATAAACTCGTGAAAAGCAAGAGAACACTCCACTACCATCTACCCTAGTACCTATCCTCCAGACTCTCTTATCTAAGGTCATGTCCTCGACAACTTGAAGGTGTGTCATGTCATGTCTAATCACCTATCTCCAACACTTCTTTGACCTACCTCTCCCTATACCTAGTATGACCAGCCTTTTGCACTTCCTTAGTAAACGTGTGCACATCTCTTCACATTTCCAAACCATTTCAATCAGACTTTTTTTGTCAAAGAAAGTTACAAAGTGCAAAATAACACAATACCATACTCTATTTTTTTTTTGGAAGGGGTGGTTACTCCATATCAAAGAAAATAGTTATTTCGAACAACCATAAATTAGTTTGAAGTTTGAACCATATAGCGAACCTGTGTAGTTTGTAGATGTTTTATTCACAGCAGCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E207952" ref_strand="+" ref_description="SGN-E207952 [cLEC-34-L3]">
      <seq>aatatacatagtgaaattccacaagaaaggttttggaagggtagagtatatgtagaccttaccattacctcgtggaggtagaaatgttttcaaaagagtctcggctcaagtgcaacaaattctagtgcaagaattaataaaacaatataacaaaacataataattaccaggaaagtggtggaaatcctacaagaataacaaaataatgcgataattaaaactctagtaaaaacatatgacaatagatgttaaaagcaagaagtacaataatacggctagtacaagacaaacataaactcgtgaaaagcaagagaacactccactaccatctaccctagtacctatcctccagactctcttatctaaggtcatgtcctcgacaacttgaaggtgtgtcatgtcatgtctaatcacctatctccaacacttctttgacctacctctccctatacctagtatgaccagccttttgcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="11844" stop="10770"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11544" g_stop="11070" g_length="475"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="475" r_length="475" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E207952" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>475</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E207952" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11544" e_stop="11070"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATATACATAGTGAAATTCCACAAGAAAGGTTTTGGAAGGGTAGAGTATATGTAGACCTTACCATTACCTCGTGGAGGTAGAAATGTTTTCAAAAGAGTCTCGGCTCAAGTGCAACAAATTCTAGTGCAAGAATTAATAAAACAATATAACAAAACATAATAATTACCAGGAAAGTGGTGGAAATCCTACAAGAATAACAAAATAATGCGATAATTAAAACTCTAGTAAAAACATATGACAATAGATGTTAAAAGCAAGAAGTACAATAATACGGCTAGTACAAGACAAACATAAACTCGTGAAAAGCAAGAGAACACTCCACTACCATCTACCCTAGTACCTATCCTCCAGACTCTCTTATCTAAGGTCATGTCCTCGACAACTTGAAGGTGTGTCATGTCATGTCTAATCACCTATCTCCAACACTTCTTTGACCTACCTCTCCCTATACCTAGTATGACCAGCCTTTTGCAC</genome_strand>
        <mrna_strand>AATATACATAGTGAAATTCCACAAGAAAGGTTTTGGAAGGGTAGAGTATATGTAGACCTTACCATTACCTCGTGGAGGTAGAAATGTTTTCAAAAGAGTCTCGGCTCAAGTGCAACAAATTCTAGTGCAAGAATTAATAAAACAATATAACAAAACATAATAATTACCAGGAAAGTGGTGGAAATCCTACAAGAATAACAAAATAATGCGATAATTAAAACTCTAGTAAAAACATATGACAATAGATGTTAAAAGCAAGAAGTACAATAATACGGCTAGTACAAGACAAACATAAACTCGTGAAAAGCAAGAGAACACTCCACTACCATCTACCCTAGTACCTATCCTCCAGACTCTCTTATCTAAGGTCATGTCCTCGACAACTTGAAGGTGTGTCATGTCATGTCTAATCACCTATCTCCAACACTTCTTTGACCTACCTCTCCCTATACCTAGTATGACCAGCCTTTTGCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E334709" ref_strand="+" ref_description="SGN-E334709 [cTOD-23-L10]">
      <seq>tcgactatttgggtagaaggttagtaggttgaagtgttatcctgcattgcaaaggtttatgcctgttagggtatgttttagtacttgttacccttgtgattcttgtcatatgtcgtttattgtgttttaattatcgcattgttttattgttcttatagtttttttcttgtaaatttcacactactttctttttaactgttacgttttctttattgtttttatttcttttactttgatttgatgcgtacagtcgagaattcttcgaaaatagtctttctagcttcttgaggtagtggtgagttgcgtacactatacactctcagtccccacttagtggaatttctctgtgaatgttgttgttgtataggatgttgaatgaatgcaattatgaaagaaaagaaaaatacaacaacaatatacatagtgaaattccacaagaaaggttttggaagggtagagtatatgtagaccttaccattacctcgtggaggtagaaatgttttcaaaagagtctcggctcaagtgcaacaaattctagtgcaagaattaataaaacaatataacaaaacataataattaccnaggaaagtggtggaaatcctacaagaataacaaaataatgcga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="12257" stop="11034"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11957" g_stop="11334" g_length="624"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="625" r_length="625" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E334709" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>624</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E334709" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11957" e_stop="11334"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGACTATTTGGGTAGAAGGTTAGTAGGTTGAAGTGTTATCCTGCATTGCAAAGGTTTATGCCTGTTAGGGTATGTTTTAGTACTTGTTACCCTTGTGATTCTTGTCATATGTCGTTTATTGTGTTTTAATTATCGCATTGTTTTATTGTTCTTATAGTTTTTTTCTTGTAAATTTCACACTACTTTCTTTTTAACTGTTACGTTTTCTTTATTGTTTTTATTTCTTTTACTTTGATTTGATGCGTACAGTCGAGAATTCTTCGAAAATAGTCTTTCTAGCTTCTTGAGGTAGTGGTGAGTTGCGTACACTATACACTCTCAGTCCCCACTTAGTGGAATTTCTCTGTGAATGTTGTTGTTGTATAGGATGTTGAATGAATGCAATTATGAAAGAAAAGAAAAATACAACAACAATATACATAGTGAAATTCCACAAGAAAGGTTTTGGAAGGGTAGAGTATATGTAGACCTTACCATTACCTCGTGGAGGTAGAAATGTTTTCAAAAGAGTCTCGGCTCAAGTGCAACAAATTCTAGTGCAAGAATTAATAAAACAATATAACAAAACATAATAATTACC-AGGAAAGTGGTGGAAATCCTACAAGAATAACAAAATAATGCGA</genome_strand>
        <mrna_strand>TCGACTATTTGGGTAGAAGGTTAGTAGGTTGAAGTGTTATCCTGCATTGCAAAGGTTTATGCCTGTTAGGGTATGTTTTAGTACTTGTTACCCTTGTGATTCTTGTCATATGTCGTTTATTGTGTTTTAATTATCGCATTGTTTTATTGTTCTTATAGTTTTTTTCTTGTAAATTTCACACTACTTTCTTTTTAACTGTTACGTTTTCTTTATTGTTTTTATTTCTTTTACTTTGATTTGATGCGTACAGTCGAGAATTCTTCGAAAATAGTCTTTCTAGCTTCTTGAGGTAGTGGTGAGTTGCGTACACTATACACTCTCAGTCCCCACTTAGTGGAATTTCTCTGTGAATGTTGTTGTTGTATAGGATGTTGAATGAATGCAATTATGAAAGAAAAGAAAAATACAACAACAATATACATAGTGAAATTCCACAAGAAAGGTTTTGGAAGGGTAGAGTATATGTAGACCTTACCATTACCTCGTGGAGGTAGAAATGTTTTCAAAAGAGTCTCGGCTCAAGTGCAACAAATTCTAGTGCAAGAATTAATAAAACAATATAACAAAACATAATAATTACCNAGGAAAGTGGTGGAAATCCTACAAGAATAACAAAATAATGCGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E316488" ref_strand="+" ref_description="SGN-E316488 [cTOA-25-I23]">
      <seq>ataaaactcatcagagatttccagatctgtacagttgatgaccatggatcagtccattttcagatctttgattgaatggtttagattgattcaattaaagattgatgttcgcatatcctcgaagcaggttcgaatcttaatttttataaacaattattgtttaagtttatgtctttgctttcatctttatctgtgtatactgaggatgaaccatatacttgatgtttatatctactagtattgtttatgaaataaaagtgaaattaatgaatatcttgtgttagtttgactggaggcagttttcaatctacttgatttactattttatgtccccttattttttgcatatcttgtttccttgctttgaacatctagacgagtgaagcaacgcttagatggtttaggcatgtgtacaggaagcgcatagacatccggtgagaaagtgcaataggttgatagcaaggggtagagataaacaaaaaaagtattaatgaagtgattagatatgacataaaacaactttattttgtcaagtacatgactctagataaggagtgagggtcgactatttgggtagaaggttagtaggttgaagtgttatcctgcattgcaaaggtttatgcctgttanggtatgttttagtacttgttacccttgtgattcttgtcatatgtcgtttattgtgttttaattatcgcattgttttattggtcttatagtttttttcttgtaaatttcacactactttctttttaactgttacgntttctttattgtttttattcttttactttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="12818" stop="11422"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12518" g_stop="11722" g_length="797"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="796" r_length="796" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E316488" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>797</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E316488" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12518" e_stop="11722"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAAAACTCATCAGAGATTTCCAGATCTGTACAGTTGATGACCATGGATCAGTCCATTTTCAGATCTTTGATTGAATGGTTTAGATTGATTCAATTAAAGATTGATGTTCGCATATCCTCGAAGCAGGTTCGAATCTTAATTTTTATAAACAATTATTGTTTAAGTTTATGTCTTTGCTTTCATCTTTATCTGTGTATACTGAGGATGAACCATATACTTGATGTTTATATCTACTAGTATTGTTTATGAAATAAAAGTGAAATTAATGAATATCTTGTGTTAGTTTGACTGGAGGCAGTTTTCAATCTACTTGATTTACTATTTTATGTCCCCTTATTTTTTGCATATCTTGTTTCCTTGCTTTGAACATCTAGACGAGTGAAGCAACGCTTAGATGGTTTAGGCATGTGTACAGGAAGCGCATAGACATCCGGTGAGAAAGTGCAATAGGTTGATAGCAAGGGGTAGAGATAAACAAAAAAAGTATTAATGAAGTGATTAGATATGACATAAAACAACTTTATTTTGTCAAGTACATGACTCTAGATAAGGAGTGAGGGTCGACTATTTGGGTAGAAGGTTAGTAGGTTGAAGTGTTATCCTGCATTGCAAAGGTTTATGCCTGTTAGGGTATGTTTTAGTACTTGTTACCCTTGTGATTCTTGTCATATGTCGTTTATTGTGTTTTAATTATCGCATTGTTTTATTGTTCTTATAGTTTTTTTCTTGTAAATTTCACACTACTTTCTTTTTAACTGTTACGTTTTCTTTATTGTTTTTATTTCTTTTACTTTGA</genome_strand>
        <mrna_strand>ATAAAACTCATCAGAGATTTCCAGATCTGTACAGTTGATGACCATGGATCAGTCCATTTTCAGATCTTTGATTGAATGGTTTAGATTGATTCAATTAAAGATTGATGTTCGCATATCCTCGAAGCAGGTTCGAATCTTAATTTTTATAAACAATTATTGTTTAAGTTTATGTCTTTGCTTTCATCTTTATCTGTGTATACTGAGGATGAACCATATACTTGATGTTTATATCTACTAGTATTGTTTATGAAATAAAAGTGAAATTAATGAATATCTTGTGTTAGTTTGACTGGAGGCAGTTTTCAATCTACTTGATTTACTATTTTATGTCCCCTTATTTTTTGCATATCTTGTTTCCTTGCTTTGAACATCTAGACGAGTGAAGCAACGCTTAGATGGTTTAGGCATGTGTACAGGAAGCGCATAGACATCCGGTGAGAAAGTGCAATAGGTTGATAGCAAGGGGTAGAGATAAACAAAAAAAGTATTAATGAAGTGATTAGATATGACATAAAACAACTTTATTTTGTCAAGTACATGACTCTAGATAAGGAGTGAGGGTCGACTATTTGGGTAGAAGGTTAGTAGGTTGAAGTGTTATCCTGCATTGCAAAGGTTTATGCCTGTTANGGTATGTTTTAGTACTTGTTACCCTTGTGATTCTTGTCATATGTCGTTTATTGTGTTTTAATTATCGCATTGTTTTATTGGTCTTATAGTTTTTTTCTTGTAAATTTCACACTACTTTCTTTTTAACTGTTACGNTTTCTTTATTGTTTTTA-TTCTTTTACTTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E395399" ref_strand="+" ref_description="SGN-E395399 [TUS-16-E20]">
      <seq>agatttccagatctgtacagttgatgaccatggatcagtccattttcagatctttgattgaatggtttagattgattcaattaaagattgatgttcgcatatcctcgaagcaggttcgaatcttaatttttataaacaattattgtttaagtttatgtctttgctttcatctttatctgtgtatactgaggatgaaccatatacttgatgtttatatctactagtattgtttatgaaataaaagtgaaattaatgaatatcttgtgttagtttgactggaggcagttttcaatctacttgatttactattttatgtccccttattttttgcatatcttgtttccttgctttgaacatctagacgagtgaagcaacgcttagatggtttaggcatgtgtacaggaagcgcatagacatccggtgagaaagtgcaataggttgatagcaaggggtagagataaacaaaaaaagtattaatgaagtgattagatatgacataaaacaactttattttgtcaagtacatgactctagataaggagtgagggtcgactatttgggtagaaggttagtangttgaagtgttatcctgcattgcaaaggtttatgcctgttagggtatgttttagtacttgttacccttgtgattcttgtcatatgtcgtttattgtgttttaattat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="12804" stop="11524"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12504" g_stop="11824" g_length="681"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="681" r_length="681" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E395399" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>681</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E395399" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12504" e_stop="11824"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATTTCCAGATCTGTACAGTTGATGACCATGGATCAGTCCATTTTCAGATCTTTGATTGAATGGTTTAGATTGATTCAATTAAAGATTGATGTTCGCATATCCTCGAAGCAGGTTCGAATCTTAATTTTTATAAACAATTATTGTTTAAGTTTATGTCTTTGCTTTCATCTTTATCTGTGTATACTGAGGATGAACCATATACTTGATGTTTATATCTACTAGTATTGTTTATGAAATAAAAGTGAAATTAATGAATATCTTGTGTTAGTTTGACTGGAGGCAGTTTTCAATCTACTTGATTTACTATTTTATGTCCCCTTATTTTTTGCATATCTTGTTTCCTTGCTTTGAACATCTAGACGAGTGAAGCAACGCTTAGATGGTTTAGGCATGTGTACAGGAAGCGCATAGACATCCGGTGAGAAAGTGCAATAGGTTGATAGCAAGGGGTAGAGATAAACAAAAAAAGTATTAATGAAGTGATTAGATATGACATAAAACAACTTTATTTTGTCAAGTACATGACTCTAGATAAGGAGTGAGGGTCGACTATTTGGGTAGAAGGTTAGTAGGTTGAAGTGTTATCCTGCATTGCAAAGGTTTATGCCTGTTAGGGTATGTTTTAGTACTTGTTACCCTTGTGATTCTTGTCATATGTCGTTTATTGTGTTTTAATTAT</genome_strand>
        <mrna_strand>AGATTTCCAGATCTGTACAGTTGATGACCATGGATCAGTCCATTTTCAGATCTTTGATTGAATGGTTTAGATTGATTCAATTAAAGATTGATGTTCGCATATCCTCGAAGCAGGTTCGAATCTTAATTTTTATAAACAATTATTGTTTAAGTTTATGTCTTTGCTTTCATCTTTATCTGTGTATACTGAGGATGAACCATATACTTGATGTTTATATCTACTAGTATTGTTTATGAAATAAAAGTGAAATTAATGAATATCTTGTGTTAGTTTGACTGGAGGCAGTTTTCAATCTACTTGATTTACTATTTTATGTCCCCTTATTTTTTGCATATCTTGTTTCCTTGCTTTGAACATCTAGACGAGTGAAGCAACGCTTAGATGGTTTAGGCATGTGTACAGGAAGCGCATAGACATCCGGTGAGAAAGTGCAATAGGTTGATAGCAAGGGGTAGAGATAAACAAAAAAAGTATTAATGAAGTGATTAGATATGACATAAAACAACTTTATTTTGTCAAGTACATGACTCTAGATAAGGAGTGAGGGTCGACTATTTGGGTAGAAGGTTAGTANGTTGAAGTGTTATCCTGCATTGCAAAGGTTTATGCCTGTTAGGGTATGTTTTAGTACTTGTTACCCTTGTGATTCTTGTCATATGTCGTTTATTGTGTTTTAATTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E316412" ref_strand="+" ref_description="SGN-E316412 [cTOA-25-J5]">
      <seq>ataaaactcatcagagatttccagatctgtacagttgatgaccatggatcagtccattttcagatctttgattgaatggtttagattgattcaattaaagattgatgttcgcatatcctcgaagcaggttcgaatcttaatttttataaacaattattgtttaagtttatgtctttgctttcatctttatctgtgtatactgaggatgaaccatatacttgatgtttatatctactagtattgtttatgaaataaaagtgaaattaatgaatatcttgtgttagtttgactggaggcagttttcaatctacttgatttactattttatgtccccttattttttgcatatcttgtttccttgctttgaacatctagacgagtgaagcaacgcttagatggtttaggcatgtgtacaggaagcgcatagacatccggtgagaaagtgcaataggttgatagcaaggggtagagataaacaaaaaaagtattaatgaagtgattagatatgacataaaacaactttattttgtcaagtacatgactctagataaggagtgagggtcgactatttgggtagaaggttagtaggttgaagtgttatcctgcattgcaaaggtttatgcctgttagggtatgttttagtacttgttaccctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="12818" stop="11563"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12518" g_stop="11863" g_length="656"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="656" r_length="656" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E316412" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>656</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E316412" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12518" e_stop="11863"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAAAACTCATCAGAGATTTCCAGATCTGTACAGTTGATGACCATGGATCAGTCCATTTTCAGATCTTTGATTGAATGGTTTAGATTGATTCAATTAAAGATTGATGTTCGCATATCCTCGAAGCAGGTTCGAATCTTAATTTTTATAAACAATTATTGTTTAAGTTTATGTCTTTGCTTTCATCTTTATCTGTGTATACTGAGGATGAACCATATACTTGATGTTTATATCTACTAGTATTGTTTATGAAATAAAAGTGAAATTAATGAATATCTTGTGTTAGTTTGACTGGAGGCAGTTTTCAATCTACTTGATTTACTATTTTATGTCCCCTTATTTTTTGCATATCTTGTTTCCTTGCTTTGAACATCTAGACGAGTGAAGCAACGCTTAGATGGTTTAGGCATGTGTACAGGAAGCGCATAGACATCCGGTGAGAAAGTGCAATAGGTTGATAGCAAGGGGTAGAGATAAACAAAAAAAGTATTAATGAAGTGATTAGATATGACATAAAACAACTTTATTTTGTCAAGTACATGACTCTAGATAAGGAGTGAGGGTCGACTATTTGGGTAGAAGGTTAGTAGGTTGAAGTGTTATCCTGCATTGCAAAGGTTTATGCCTGTTAGGGTATGTTTTAGTACTTGTTACCCTT</genome_strand>
        <mrna_strand>ATAAAACTCATCAGAGATTTCCAGATCTGTACAGTTGATGACCATGGATCAGTCCATTTTCAGATCTTTGATTGAATGGTTTAGATTGATTCAATTAAAGATTGATGTTCGCATATCCTCGAAGCAGGTTCGAATCTTAATTTTTATAAACAATTATTGTTTAAGTTTATGTCTTTGCTTTCATCTTTATCTGTGTATACTGAGGATGAACCATATACTTGATGTTTATATCTACTAGTATTGTTTATGAAATAAAAGTGAAATTAATGAATATCTTGTGTTAGTTTGACTGGAGGCAGTTTTCAATCTACTTGATTTACTATTTTATGTCCCCTTATTTTTTGCATATCTTGTTTCCTTGCTTTGAACATCTAGACGAGTGAAGCAACGCTTAGATGGTTTAGGCATGTGTACAGGAAGCGCATAGACATCCGGTGAGAAAGTGCAATAGGTTGATAGCAAGGGGTAGAGATAAACAAAAAAAGTATTAATGAAGTGATTAGATATGACATAAAACAACTTTATTTTGTCAAGTACATGACTCTAGATAAGGAGTGAGGGTCGACTATTTGGGTAGAAGGTTAGTAGGTTGAAGTGTTATCCTGCATTGCAAAGGTTTATGCCTGTTAGGGTATGTTTTAGTACTTGTTACCCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E316550" ref_strand="+" ref_description="SGN-E316550 [cTOA-25-D19]">
      <seq>atctctactaaaatcccttataaactctctatctattcctactcctgccttcctcccaaatcctttaaccccagatgatattcatccataaaactcatcagagataaatcctttaaccccagatgatattcatccataaaactcatcagagatttccagatctgtacagttgatgaccatggatcagtccattttcagatctttgattgaatggtttagattgattcaattaaagattgatgttcgcatatcctcgaagcaggttcgaatcttaatttttataaacaattattgtttaagtttatgtctttgctttcatctttatctgtgtatactgaggatgaaccatatacttgatgtttatatctactagtattgtttatgaaataaaagtgaaattaatgaatatcttgtgttagtttgactggaggcagttttcaatctacttgatttactattttatgtccccttattttttgcatatcttgtttccttgctttgaacatctagacgagtgaagcaacgcttagatggtttaggcatgtgtacaggaagcgcatagacatccggtgagaaagtgcaataggttgatagcaaggggtagagataaacaaaaaaagtattaatgaagtgattagatatgacataaaacaactttattttgtcaagtacatgactctagataaggagtgagggtcgactatttgggtagaanggtagtanggttgagtgttatcctgcattgcaaagggttat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="12953" stop="11598"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12653" g_stop="11898" g_length="756"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="756" r_length="756" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E316550" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>756</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E316550" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12653" e_stop="11898"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTCTACTAAAATCCCTTATAAACTCTCTATCTATTCCTACTCCTGCCTTCCTCCCAAATCCTTTAACCCCAGATGATATTCATCCATAAAACTCATCAGAGATAAATCCTTTAACCCCAGATGATATTCATCCATAAAACTCATCAGAGATTTCCAGATCTGTACAGTTGATGACCATGGATCAGTCCATTTTCAGATCTTTGATTGAATGGTTTAGATTGATTCAATTAAAGATTGATGTTCGCATATCCTCGAAGCAGGTTCGAATCTTAATTTTTATAAACAATTATTGTTTAAGTTTATGTCTTTGCTTTCATCTTTATCTGTGTATACTGAGGATGAACCATATACTTGATGTTTATATCTACTAGTATTGTTTATGAAATAAAAGTGAAATTAATGAATATCTTGTGTTAGTTTGACTGGAGGCAGTTTTCAATCTACTTGATTTACTATTTTATGTCCCCTTATTTTTTGCATATCTTGTTTCCTTGCTTTGAACATCTAGACGAGTGAAGCAACGCTTAGATGGTTTAGGCATGTGTACAGGAAGCGCATAGACATCCGGTGAGAAAGTGCAATAGGTTGATAGCAAGGGGTAGAGATAAACAAAAAAAGTATTAATGAAGTGATTAGATATGACATAAAACAACTTTATTTTGTCAAGTACATGACTCTAGATAAGGAGTGAGGGTCGACTATTTGGGTAGAAGGTTAGTAGGTTGAAGTGTTATCCTGCATTGCAAAGGTTTAT</genome_strand>
        <mrna_strand>ATCTCTACTAAAATCCCTTATAAACTCTCTATCTATTCCTACTCCTGCCTTCCTCCCAAATCCTTTAACCCCAGATGATATTCATCCATAAAACTCATCAGAGATAAATCCTTTAACCCCAGATGATATTCATCCATAAAACTCATCAGAGATTTCCAGATCTGTACAGTTGATGACCATGGATCAGTCCATTTTCAGATCTTTGATTGAATGGTTTAGATTGATTCAATTAAAGATTGATGTTCGCATATCCTCGAAGCAGGTTCGAATCTTAATTTTTATAAACAATTATTGTTTAAGTTTATGTCTTTGCTTTCATCTTTATCTGTGTATACTGAGGATGAACCATATACTTGATGTTTATATCTACTAGTATTGTTTATGAAATAAAAGTGAAATTAATGAATATCTTGTGTTAGTTTGACTGGAGGCAGTTTTCAATCTACTTGATTTACTATTTTATGTCCCCTTATTTTTTGCATATCTTGTTTCCTTGCTTTGAACATCTAGACGAGTGAAGCAACGCTTAGATGGTTTAGGCATGTGTACAGGAAGCGCATAGACATCCGGTGAGAAAGTGCAATAGGTTGATAGCAAGGGGTAGAGATAAACAAAAAAAGTATTAATGAAGTGATTAGATATGACATAAAACAACTTTATTTTGTCAAGTACATGACTCTAGATAAGGAGTGAGGGTCGACTATTTGGGTAGAANGGTAGTANGGTTGAGTGTTATCCTGCATTGCAAAGGGTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E316583" ref_strand="+" ref_description="SGN-E316583 [cTOA-25-D4]">
      <seq>caatctctactaaaatcccttataaactctctatctattcctactcctgccttcctcccaaatcctttaaccccagatgatattcatccataaaactcatcagagataaatcctttaaccccagatgatattcatccataaaactcatcagagatttccagatctgtacagttgatgaccatggatcagtccattttcagatctttgattgaatggtttagattgattcaattaaagattgatgttcgcatatcctcgaagcaggttcgaatcttaatttttataaacaattattgtttaagtttatgtctttgctttcatctttatctgtgtatactgaggatgaaccatatacttgatgtttatatctactagtattgtttatgaaataaaagtgaaattaatgaatatcttgtgttagtttgactggaggcagttttcaatctacttgatttactattttatgtccccttattttttgcatatnctgtttccttggcttgaacatctagacgagtgaagcaacgcttagatgggttaggcatgtgtacaggaagcgcatagacatccggtgagaaagtggcataggttgatagcanggggtagagataaacaaaaaagtattaatgaagtgattagatatgacataaaacaactttattttgtcaagtacatgactctag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="12955" stop="11672"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12655" g_stop="11972" g_length="684"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="683" r_length="683" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E316583" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>684</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E316583" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12655" e_stop="11972"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATCTCTACTAAAATCCCTTATAAACTCTCTATCTATTCCTACTCCTGCCTTCCTCCCAAATCCTTTAACCCCAGATGATATTCATCCATAAAACTCATCAGAGATAAATCCTTTAACCCCAGATGATATTCATCCATAAAACTCATCAGAGATTTCCAGATCTGTACAGTTGATGACCATGGATCAGTCCATTTTCAGATCTTTGATTGAATGGTTTAGATTGATTCAATTAAAGATTGATGTTCGCATATCCTCGAAGCAGGTTCGAATCTTAATTTTTATAAACAATTATTGTTTAAGTTTATGTCTTTGCTTTCATCTTTATCTGTGTATACTGAGGATGAACCATATACTTGATGTTTATATCTACTAGTATTGTTTATGAAATAAAAGTGAAATTAATGAATATCTTGTGTTAGTTTGACTGGAGGCAGTTTTCAATCTACTTGATTTACTATTTTATGTCCCCTTATTTTTTGCATATCTTGTTTCCTTGCTTTGAACATCTAGACGAGTGAAGCAACGCTTAGATGGTTTAGGCATGTGTACAGGAAGCGCATAGACATCCGGTGAGAAAGTGCAATAGGTTGATAGCAAGGGGTAGAGATAAACAAAAAAAGTATTAATGAAGTGATTAGATATGACATAAAACAACTTTATTTTGTCAAGTACATGACTCTAG</genome_strand>
        <mrna_strand>CAATCTCTACTAAAATCCCTTATAAACTCTCTATCTATTCCTACTCCTGCCTTCCTCCCAAATCCTTTAACCCCAGATGATATTCATCCATAAAACTCATCAGAGATAAATCCTTTAACCCCAGATGATATTCATCCATAAAACTCATCAGAGATTTCCAGATCTGTACAGTTGATGACCATGGATCAGTCCATTTTCAGATCTTTGATTGAATGGTTTAGATTGATTCAATTAAAGATTGATGTTCGCATATCCTCGAAGCAGGTTCGAATCTTAATTTTTATAAACAATTATTGTTTAAGTTTATGTCTTTGCTTTCATCTTTATCTGTGTATACTGAGGATGAACCATATACTTGATGTTTATATCTACTAGTATTGTTTATGAAATAAAAGTGAAATTAATGAATATCTTGTGTTAGTTTGACTGGAGGCAGTTTTCAATCTACTTGATTTACTATTTTATGTCCCCTTATTTTTTGCATATNCTGTTTCCTTGGCTTGAACATCTAGACGAGTGAAGCAACGCTTAGATGGGTTAGGCATGTGTACAGGAAGCGCATAGACATCCGGTGAGAAAGTGGCATAGGTTGATAGCANGGGGTAGAGATAAAC-AAAAAAGTATTAATGAAGTGATTAGATATGACATAAAACAACTTTATTTTGTCAAGTACATGACTCTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E316392" ref_strand="+" ref_description="SGN-E316392 [cTOA-25-D5]">
      <seq>caatctctactaaaatcccttataaactctctatctattcctactcctgccttcctcccaaatcctttaaccccagatgatattcatccataaaactcatcagagataaatcctttaaccccagatgatattcatccataaaactcatcagagatttccagatctgtacagttgatgaccatggatcagtccattttcagatctttgattgaatggtttagattgattcaattaaagattgatgttcgcatatcctcgaagcaggttcgaatcttaatttttataaacaattattgtttaagtttatgtctttgctttcatctttatctgtgtatactgaggatgaaccatatacttgatgtttatatctactagtattgtttatgaaataaaagtgaaattaatgaatatcttgtgttagtttgactggaggcagttttcaatctacttgatttactattttatgtccccttattttttgcatatcttgtttccttgctttgaacatctagacgagtgaagcaacgcttagatggtttaggcatgtgtacaggaagcgcatagacatccggtgagaaagtgcaataggttgatagncaggggtagagatnaacaaaaaagtattaatgaagtgattagatatgacataaaacaactttattttgtcaagtacatgact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="12955" stop="11676"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12655" g_stop="11976" g_length="680"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="679" r_length="679" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E316392" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E316392" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12655" e_stop="11976"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATCTCTACTAAAATCCCTTATAAACTCTCTATCTATTCCTACTCCTGCCTTCCTCCCAAATCCTTTAACCCCAGATGATATTCATCCATAAAACTCATCAGAGATAAATCCTTTAACCCCAGATGATATTCATCCATAAAACTCATCAGAGATTTCCAGATCTGTACAGTTGATGACCATGGATCAGTCCATTTTCAGATCTTTGATTGAATGGTTTAGATTGATTCAATTAAAGATTGATGTTCGCATATCCTCGAAGCAGGTTCGAATCTTAATTTTTATAAACAATTATTGTTTAAGTTTATGTCTTTGCTTTCATCTTTATCTGTGTATACTGAGGATGAACCATATACTTGATGTTTATATCTACTAGTATTGTTTATGAAATAAAAGTGAAATTAATGAATATCTTGTGTTAGTTTGACTGGAGGCAGTTTTCAATCTACTTGATTTACTATTTTATGTCCCCTTATTTTTTGCATATCTTGTTTCCTTGCTTTGAACATCTAGACGAGTGAAGCAACGCTTAGATGGTTTAGGCATGTGTACAGGAAGCGCATAGACATCCGGTGAGAAAGTGCAATAGGTTGATAGCAAGGGGTAGAGATAAACAAAAAAAGTATTAATGAAGTGATTAGATATGACATAAAACAACTTTATTTTGTCAAGTACATGACT</genome_strand>
        <mrna_strand>CAATCTCTACTAAAATCCCTTATAAACTCTCTATCTATTCCTACTCCTGCCTTCCTCCCAAATCCTTTAACCCCAGATGATATTCATCCATAAAACTCATCAGAGATAAATCCTTTAACCCCAGATGATATTCATCCATAAAACTCATCAGAGATTTCCAGATCTGTACAGTTGATGACCATGGATCAGTCCATTTTCAGATCTTTGATTGAATGGTTTAGATTGATTCAATTAAAGATTGATGTTCGCATATCCTCGAAGCAGGTTCGAATCTTAATTTTTATAAACAATTATTGTTTAAGTTTATGTCTTTGCTTTCATCTTTATCTGTGTATACTGAGGATGAACCATATACTTGATGTTTATATCTACTAGTATTGTTTATGAAATAAAAGTGAAATTAATGAATATCTTGTGTTAGTTTGACTGGAGGCAGTTTTCAATCTACTTGATTTACTATTTTATGTCCCCTTATTTTTTGCATATCTTGTTTCCTTGCTTTGAACATCTAGACGAGTGAAGCAACGCTTAGATGGTTTAGGCATGTGTACAGGAAGCGCATAGACATCCGGTGAGAAAGTGCAATAGGTTGATAGNCAGGGGTAGAGATNAAC-AAAAAAGTATTAATGAAGTGATTAGATATGACATAAAACAACTTTATTTTGTCAAGTACATGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E205045" ref_strand="+" ref_description="SGN-E205045 [cLEC-16-P21]">
      <seq>gatttccagatctgtacagttgatgaccatggatcagggcattttcagatctttgattgaatggtttaaattgattcaattaaagattgatgttcgcatatcctcgaagcaggttcgaatcttaatttttataaacaattattgtttaagtttatgtctttgctttcatctttatctgtgtatactgaggatgaaccatatacttgatgtttatatctactagtattgtttatgaaataaaagtgaaattaatgaatatcttgtgttagtttgactggaggcagttttcaatctacttgatttactattttatgtccccttattttttgcatatcttgtttccttgctttgaacatctagacgagtgaagcaacgcttagatggtttaggcatgtgtacaggaagcgcatagacatccggtgagaaagtgcaataggttgatagcaaggggtagagataaacaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="12803" stop="11735"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12503" g_stop="12035" g_length="469"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="469" r_length="469" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E205045" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>469</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E205045" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12503" e_stop="12035"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTTCCAGATCTGTACAGTTGATGACCATGGATCAGTCCATTTTCAGATCTTTGATTGAATGGTTTAGATTGATTCAATTAAAGATTGATGTTCGCATATCCTCGAAGCAGGTTCGAATCTTAATTTTTATAAACAATTATTGTTTAAGTTTATGTCTTTGCTTTCATCTTTATCTGTGTATACTGAGGATGAACCATATACTTGATGTTTATATCTACTAGTATTGTTTATGAAATAAAAGTGAAATTAATGAATATCTTGTGTTAGTTTGACTGGAGGCAGTTTTCAATCTACTTGATTTACTATTTTATGTCCCCTTATTTTTTGCATATCTTGTTTCCTTGCTTTGAACATCTAGACGAGTGAAGCAACGCTTAGATGGTTTAGGCATGTGTACAGGAAGCGCATAGACATCCGGTGAGAAAGTGCAATAGGTTGATAGCAAGGGGTAGAGATAAACAAAAAAA</genome_strand>
        <mrna_strand>GATTTCCAGATCTGTACAGTTGATGACCATGGATCAGGGCATTTTCAGATCTTTGATTGAATGGTTTAAATTGATTCAATTAAAGATTGATGTTCGCATATCCTCGAAGCAGGTTCGAATCTTAATTTTTATAAACAATTATTGTTTAAGTTTATGTCTTTGCTTTCATCTTTATCTGTGTATACTGAGGATGAACCATATACTTGATGTTTATATCTACTAGTATTGTTTATGAAATAAAAGTGAAATTAATGAATATCTTGTGTTAGTTTGACTGGAGGCAGTTTTCAATCTACTTGATTTACTATTTTATGTCCCCTTATTTTTTGCATATCTTGTTTCCTTGCTTTGAACATCTAGACGAGTGAAGCAACGCTTAGATGGTTTAGGCATGTGTACAGGAAGCGCATAGACATCCGGTGAGAAAGTGCAATAGGTTGATAGCAAGGGGTAGAGATAAACAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E391604" ref_strand="+" ref_description="SGN-E391604 [TUS-16-C20]">
      <seq>agaccaaaattattttaagacaattcactttcaatttttagttcctttaaatattaaatttctcactcacatcaattttgtgtttcaaataatggaatagaaaaaaaatagaactttgttatgttcgtatttccttaatccagcaactaactctctccactgtttaactgaaaagatcccacgcattataaattaatagctagtgctaaagaaaattacacaaaagagagacggatctaagattcaatagaagtagtgaaatctaataccattatacatgtgatggttagaatggattgaaaaaaatagttgttgtttcgaagatagatctagtctcatttgctaagtaaaatagaatagtttagtatcttttcttttttgatataaacaacttttcatagaagatgtagatcaaagttgcaagctccctatgatctgcattttctattctaagtcgattataccaaaaaataaagattttaaaaaatttcatattacttttgtgaataaaattaatattaaatctattttcaaaatatctttcattttttttcttgcagactgaccatcatatccatgataatattaattagctttcaccattacttttgagttttagattctccacctatctcttctgtgtaacttactttcttgcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="+" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="16326" stop="17585"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16626" g_stop="17285" g_length="660"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="660" r_length="660" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="+" ref_id="SGN-E391604" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>660</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E391604" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16626" e_stop="17285"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACCAAAATTATTTTAAGACAATTCACTTTCAATTTTTAGTTCCTTTAAATATTAAATTTCTCACTCACATCAATTTTGTGTTTCAAATAATGGAATAGAAAAAAAATAGAACTTTGTTATGTTCGTATTTCCTTAATCCAGCAACTAACTCTCTCCACTGTTTAACTGAAAAGATCCCACGCATTATAAATTAATAGCTAGTGCTAAAGAAAATTACACAAAAGAGAGACGGATCTAAGATTCAATAGAAGTAGTGAAATCTAATACCATTATACATGTGATGGTTAGAATGGATTGAAAAAAATAGTTGTTGTTTCGAAGATAGATCTAGTCTCATTTGCTAAGTAAAATAGAATAGTTTAGTATCTTTTCTTTTTTGATATAAACAACTTTTCATAGAAGATGTAGATCAAAGTTGCAAGCTCCCTATGATCTGCATTTTCTATTCTAAGTCGATTATACCAAAAAATAAAGATTTTAAAAAATTTCATATTACTTTTGTGAATAAAATTAATATTAAATCTATTTTCAAAATATCTTTCATTTTTTTTCTTGCAGACTGACCATCATATCCATGATAATATTAATTAGCTTTCACCATTACTTTTGAGTTTTAGATTCTCCACCTATCTCTTCTGTGTAACTTACTTTCTTGCAA</genome_strand>
        <mrna_strand>AGACCAAAATTATTTTAAGACAATTCACTTTCAATTTTTAGTTCCTTTAAATATTAAATTTCTCACTCACATCAATTTTGTGTTTCAAATAATGGAATAGAAAAAAAATAGAACTTTGTTATGTTCGTATTTCCTTAATCCAGCAACTAACTCTCTCCACTGTTTAACTGAAAAGATCCCACGCATTATAAATTAATAGCTAGTGCTAAAGAAAATTACACAAAAGAGAGACGGATCTAAGATTCAATAGAAGTAGTGAAATCTAATACCATTATACATGTGATGGTTAGAATGGATTGAAAAAAATAGTTGTTGTTTCGAAGATAGATCTAGTCTCATTTGCTAAGTAAAATAGAATAGTTTAGTATCTTTTCTTTTTTGATATAAACAACTTTTCATAGAAGATGTAGATCAAAGTTGCAAGCTCCCTATGATCTGCATTTTCTATTCTAAGTCGATTATACCAAAAAATAAAGATTTTAAAAAATTTCATATTACTTTTGTGAATAAAATTAATATTAAATCTATTTTCAAAATATCTTTCATTTTTTTTCTTGCAGACTGACCATCATATCCATGATAATATTAATTAGCTTTCACCATTACTTTTGAGTTTTAGATTCTCCACCTATCTCTTCTGTGTAACTTACTTTCTTGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E204975" ref_strand="+" ref_description="SGN-E204975 [cLEC-16-I4]">
      <seq>ttttagttcctttaaatattaaatttctcactcacatcaattttgtgtttcaaataatggaatagaaaaaaaatagaactttgttatgttcgtatttccttaatccagcaactaactctctccactgtttaactgaaaagatcccacgcattataaattaatagctagtgctaaagaaaattacacaaaagagagacggatctaagattcaatagaagtagtgaaatctaataccattatacatgtgatggttagaatggattgaaaaaaatagttgttgtttcgaagatagatctagtctcatttgctaagtaaaatagaatagtttagtatcttttcttttttgatataaacaacttttcatagaagatgtagatcaaagttgcaagctccctatgatctgcattttctattctaagtcgattataccaaaaaataaagattttaaaaaatttcatattacttttgtgaataaaattaatattaaatctattttcaaaatatctttcattttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="+" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="16361" stop="17477"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16661" g_stop="17177" g_length="517"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="517" r_length="517" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="+" ref_id="SGN-E204975" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>517</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E204975" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16661" e_stop="17177"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTAGTTCCTTTAAATATTAAATTTCTCACTCACATCAATTTTGTGTTTCAAATAATGGAATAGAAAAAAAATAGAACTTTGTTATGTTCGTATTTCCTTAATCCAGCAACTAACTCTCTCCACTGTTTAACTGAAAAGATCCCACGCATTATAAATTAATAGCTAGTGCTAAAGAAAATTACACAAAAGAGAGACGGATCTAAGATTCAATAGAAGTAGTGAAATCTAATACCATTATACATGTGATGGTTAGAATGGATTGAAAAAAATAGTTGTTGTTTCGAAGATAGATCTAGTCTCATTTGCTAAGTAAAATAGAATAGTTTAGTATCTTTTCTTTTTTGATATAAACAACTTTTCATAGAAGATGTAGATCAAAGTTGCAAGCTCCCTATGATCTGCATTTTCTATTCTAAGTCGATTATACCAAAAAATAAAGATTTTAAAAAATTTCATATTACTTTTGTGAATAAAATTAATATTAAATCTATTTTCAAAATATCTTTCATTTTTTT</genome_strand>
        <mrna_strand>TTTTAGTTCCTTTAAATATTAAATTTCTCACTCACATCAATTTTGTGTTTCAAATAATGGAATAGAAAAAAAATAGAACTTTGTTATGTTCGTATTTCCTTAATCCAGCAACTAACTCTCTCCACTGTTTAACTGAAAAGATCCCACGCATTATAAATTAATAGCTAGTGCTAAAGAAAATTACACAAAAGAGAGACGGATCTAAGATTCAATAGAAGTAGTGAAATCTAATACCATTATACATGTGATGGTTAGAATGGATTGAAAAAAATAGTTGTTGTTTCGAAGATAGATCTAGTCTCATTTGCTAAGTAAAATAGAATAGTTTAGTATCTTTTCTTTTTTGATATAAACAACTTTTCATAGAAGATGTAGATCAAAGTTGCAAGCTCCCTATGATCTGCATTTTCTATTCTAAGTCGATTATACCAAAAAATAAAGATTTTAAAAAATTTCATATTACTTTTGTGAATAAAATTAATATTAAATCTATTTTCAAAATATCTTTCATTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E391603" ref_strand="+" ref_description="SGN-E391603 [TUS-16-C20](-)">
      <seq>tataaacaacttttcatagaagatgtagatcaaagttgcaagctccctatgatctgcattttctattctaagtcgattataccaaaaaataaagattttaaaaaatttcatattacttttgtgaataaaattaatattaaatctattttcaaaatatctttcattttttttcttgcagactgaccatcatatccatgataatattaattagctttcaccattacttttgagttttagattctccacctatctcttctgtgtaacttactttcttgcaaattattagtttataacgtttgaaatcttttgtgttgggcagtgttgagacggtgactgtttgttttaaggagataggaatagctattgactaatcatgcaagattgatttatgtagttatatattgttctctaacatttacattttttcttatttggagctttggatcggagcatacacttgaagaagcaattgggaagatgttagcagattatatatatgaaacctttttttaagagttctcttttactttcgatcaaacctcctgttcagcggtgaagctactggaatcatataatttttgtgtaaagacttataaaaataagtggattgtttattggtaaataaatacatgtttcattctcttttaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="+" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="16708" stop="17963"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17008" g_stop="17665" g_length="658"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="658" r_length="658" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="+" ref_id="SGN-E391603" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>658</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E391603" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17008" e_stop="17665"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATAAACAACTTTTCATAGAAGATGTAGATCAAAGTTGCAAGCTCCCTATGATCTGCATTTTCTATTCTAAGTCGATTATACCAAAAAATAAAGATTTTAAAAAATTTCATATTACTTTTGTGAATAAAATTAATATTAAATCTATTTTCAAAATATCTTTCATTTTTTTTCTTGCAGACTGACCATCATATCCATGATAATATTAATTAGCTTTCACCATTACTTTTGAGTTTTAGATTCTCCACCTATCTCTTCTGTGTAACTTACTTTCTTGCAAATTATTAGTTTATAACGTTTGAAATCTTTTGTGTTGGGCAGTGTTGAGACGGTGACTGTTTGTTTTAAGGAGATAGGAATAGCTATTGACTAATCATGCAAGATTGATTTATGTAGTTATATATTGTTCTCTAACATTTACATTTTTTCTTATTTGGAGCTTTGGATCGGAGCATACACTTGAAGAAGCAATTGGGAAGATGTTAGCAGATTATATATATGAAACCTTTTTTTAAGAGTTCTCTTTTACTTTCGATCAAACCTCCTGTTCAGCGGTGAAGCTACTGGAATCATATAATTTTTGTGTAAAGACTTATAAAAATAAGTGGATTGTTTATTGGTAAATAAATACATGTTTCATTCTCTTTTTAAATGAAAACC</genome_strand>
        <mrna_strand>TATAAACAACTTTTCATAGAAGATGTAGATCAAAGTTGCAAGCTCCCTATGATCTGCATTTTCTATTCTAAGTCGATTATACCAAAAAATAAAGATTTTAAAAAATTTCATATTACTTTTGTGAATAAAATTAATATTAAATCTATTTTCAAAATATCTTTCATTTTTTTTCTTGCAGACTGACCATCATATCCATGATAATATTAATTAGCTTTCACCATTACTTTTGAGTTTTAGATTCTCCACCTATCTCTTCTGTGTAACTTACTTTCTTGCAAATTATTAGTTTATAACGTTTGAAATCTTTTGTGTTGGGCAGTGTTGAGACGGTGACTGTTTGTTTTAAGGAGATAGGAATAGCTATTGACTAATCATGCAAGATTGATTTATGTAGTTATATATTGTTCTCTAACATTTACATTTTTTCTTATTTGGAGCTTTGGATCGGAGCATACACTTGAAGAAGCAATTGGGAAGATGTTAGCAGATTATATATATGAAACCTTTTTTTAAGAGTTCTCTTTTACTTTCGATCAAACCTCCTGTTCAGCGGTGAAGCTACTGGAATCATATAATTTTTGTGTAAAGACTTATAAAAATAAGTGGATTGTTTATTGGTAAATAAATACATGTTTCATTCTCTTTTAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E537608" ref_strand="+" ref_description="SGN-E537608 [TUS-56-E20](-)">
      <seq>gaaatacaaacgcccaaatcagagaaggaaacaatggaagtatcaagtggctttagcgtcaaaaatgatgaagttgtgaagctgatggaggaaattgagaagctgaaagaagaaaacagagttcaacaggagcttctatcgcagaaagatgaagagaaaagagaggtcatcaggcagctcagtttagctatggatttgctgagggaggaaaacattatgctgaggaagaagagtgttgctacgccaaaatcatctccaaagaaggaaaacatcttcgagtacaagacactaaaagaagggttccggaaagcatcatcatctccaaagaaggaaagcgtcattgagctcaagacattcaaggacgggttctggaagaggctcttcaattgatctccttattcagagactgcaatttgatatcattctatgttctagttgtgcagtattgtttcattctttatagtactaatttagttactatagtatgtaggattcataagttctcttatttcatttgctatttctagtactctctaaactcattcttgttgttattggtctgaccaatttgttgcagtatatgtaataaagtattactagtaattttcagttctaaaaaaaagaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="+" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="24163" stop="25379"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24463" g_stop="25088" g_length="626"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="626" r_length="626" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="+" ref_id="SGN-E537608" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>626</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E537608" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24463" e_stop="25088"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAATACAAACGCCCAAATCAGAGAAGGAAACAATGGAAGTATCAAGTGGCTTTAGCGTCAAAAATGATGAAGTTGTGAAGCTGATGGAGGAAATTGAGAAGCTGAAAGAAGAAAACAGAGTTCAACAGGAGCTTCTATCGCAGAAAGATGAAGAGAAAAGAGAGGTCATCAGGCAGCTCAGTTTAGCTATGGATTTGCTGAGGGAGGAAAACATTATGCTGAGGAAGAAGAGTGTTGCTACGCCAAAATCATCTCCAAAGAAGGAAAACATCTTCGAGTACAAGACACTAAAAGAAGGGTTCCGGAAAGCATCATCATCTCCAAAGAAGGAAAGCGTCATTGAGCTCAAGACATTCAAGGACGGGTTCTGGAAGAGGCTCTTCAATTGATCTCCTTATTCAGAGACTGCAATTTGATATCATTCTATGTTCTAGTTGTGCAGTATTGTTTCATTCTTTATAGTACTAATTTAGTTACTATAGTATGTAGGATTCATAAGTTCTCTTATTTCATTTGCTATTTCTAGTACTCTCTAAACTCATTCTTGTTGTTATTGGTCTGACCAATTTGTTGCAGTATATGTAATAAAGTATTACTAGTAATTTTCAGTTCTACATTCATGCAC</genome_strand>
        <mrna_strand>GAAATACAAACGCCCAAATCAGAGAAGGAAACAATGGAAGTATCAAGTGGCTTTAGCGTCAAAAATGATGAAGTTGTGAAGCTGATGGAGGAAATTGAGAAGCTGAAAGAAGAAAACAGAGTTCAACAGGAGCTTCTATCGCAGAAAGATGAAGAGAAAAGAGAGGTCATCAGGCAGCTCAGTTTAGCTATGGATTTGCTGAGGGAGGAAAACATTATGCTGAGGAAGAAGAGTGTTGCTACGCCAAAATCATCTCCAAAGAAGGAAAACATCTTCGAGTACAAGACACTAAAAGAAGGGTTCCGGAAAGCATCATCATCTCCAAAGAAGGAAAGCGTCATTGAGCTCAAGACATTCAAGGACGGGTTCTGGAAGAGGCTCTTCAATTGATCTCCTTATTCAGAGACTGCAATTTGATATCATTCTATGTTCTAGTTGTGCAGTATTGTTTCATTCTTTATAGTACTAATTTAGTTACTATAGTATGTAGGATTCATAAGTTCTCTTATTTCATTTGCTATTTCTAGTACTCTCTAAACTCATTCTTGTTGTTATTGGTCTGACCAATTTGTTGCAGTATATGTAATAAAGTATTACTAGTAATTTTCAGTTCTAAAAAAAAGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E547920" ref_strand="+" ref_description="SGN-E547920 [TUS-56-E20]">
      <seq>gaaatacaaacgcccaaatcagagaaggaaacaatggaagtatcaagtggctttagcgtcaaaaatgatgaagttgtgaagctgatggaggaaattgagaagctgaaagaagaaaacagagttcaacaggagcttctatcgcagaaagatgaagagaaaagagaggtcatcaggcagctcagtttagctatggatttgctgagggaggaaaacattatgctgaggaagaagagtgttgctacgccaaaatcatctccaaagaaggaaaacatcttcgagtacaagacactaaaagaagggttccggaaagcatcatcatctccaaagaaggaaagcgtcattgagctcaagacattcaaggacgggttctggaagaggctcttcaattgatctccttattcagagactgcaatttgatatcattctatgttctagttgtgcagtattgtttcattctttatagtactaatttagttactatagtatgtaggattcataagttctcttatttcatttgctatttctagtactctctaaactcattcttgttgttattggtctgaccaatttgttgcagtatatgtaataaagtattactagtaattttcagttctaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="+" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="24163" stop="25379"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24463" g_stop="25078" g_length="616"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="616" r_length="616" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="617" polyA_stop="626"/>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="+" ref_id="SGN-E547920" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>616</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E547920" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24463" e_stop="25078"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAATACAAACGCCCAAATCAGAGAAGGAAACAATGGAAGTATCAAGTGGCTTTAGCGTCAAAAATGATGAAGTTGTGAAGCTGATGGAGGAAATTGAGAAGCTGAAAGAAGAAAACAGAGTTCAACAGGAGCTTCTATCGCAGAAAGATGAAGAGAAAAGAGAGGTCATCAGGCAGCTCAGTTTAGCTATGGATTTGCTGAGGGAGGAAAACATTATGCTGAGGAAGAAGAGTGTTGCTACGCCAAAATCATCTCCAAAGAAGGAAAACATCTTCGAGTACAAGACACTAAAAGAAGGGTTCCGGAAAGCATCATCATCTCCAAAGAAGGAAAGCGTCATTGAGCTCAAGACATTCAAGGACGGGTTCTGGAAGAGGCTCTTCAATTGATCTCCTTATTCAGAGACTGCAATTTGATATCATTCTATGTTCTAGTTGTGCAGTATTGTTTCATTCTTTATAGTACTAATTTAGTTACTATAGTATGTAGGATTCATAAGTTCTCTTATTTCATTTGCTATTTCTAGTACTCTCTAAACTCATTCTTGTTGTTATTGGTCTGACCAATTTGTTGCAGTATATGTAATAAAGTATTACTAGTAATTTTCAGTTCTAC</genome_strand>
        <mrna_strand>GAAATACAAACGCCCAAATCAGAGAAGGAAACAATGGAAGTATCAAGTGGCTTTAGCGTCAAAAATGATGAAGTTGTGAAGCTGATGGAGGAAATTGAGAAGCTGAAAGAAGAAAACAGAGTTCAACAGGAGCTTCTATCGCAGAAAGATGAAGAGAAAAGAGAGGTCATCAGGCAGCTCAGTTTAGCTATGGATTTGCTGAGGGAGGAAAACATTATGCTGAGGAAGAAGAGTGTTGCTACGCCAAAATCATCTCCAAAGAAGGAAAACATCTTCGAGTACAAGACACTAAAAGAAGGGTTCCGGAAAGCATCATCATCTCCAAAGAAGGAAAGCGTCATTGAGCTCAAGACATTCAAGGACGGGTTCTGGAAGAGGCTCTTCAATTGATCTCCTTATTCAGAGACTGCAATTTGATATCATTCTATGTTCTAGTTGTGCAGTATTGTTTCATTCTTTATAGTACTAATTTAGTTACTATAGTATGTAGGATTCATAAGTTCTCTTATTTCATTTGCTATTTCTAGTACTCTCTAAACTCATTCTTGTTGTTATTGGTCTGACCAATTTGTTGCAGTATATGTAATAAAGTATTACTAGTAATTTTCAGTTCTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E266701" ref_strand="+" ref_description="SGN-E266701 [cLEI-5-F8]">
      <seq>aaatacaaacgcccaaatcagagaaggaaacaatggaagtatcaagtggctttagcgtcaaaaatgatgaagttgtgaagctgatggaggaaattgagaagctgaaagaagaaaacagagttcaacaggagcttctatcgcagaaagatgaagagaaaagagaggtcatcaggcagctcagtttagctatggatttgctgagggaggaaaacattatgctgaggaagaagagtgttgctacgccaaaatcatctccaaagaaggaaaacatcttcgagtacaagacactaaaagaagggttccggaaagcatcatcatctccaaagaaggaaagcgtcattgagctcaagacattcaaggacgggttctggaagaggctcttcaattgatctccttattcagagactgcaatttgatatcattctatgttctagttgtgcagtattgtttcattctttatagtactaatttagttactatagtatgtaggattcataagttctcttatttcatttgctatttctagtactctctaaactcattcttgctgttattggtctgaccaatttgttgcagtatatgtaataaagtattactagtaattttcagttctaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="+" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="24164" stop="25379"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24464" g_stop="25085" g_length="622"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="622" r_length="622" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="+" ref_id="SGN-E266701" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>622</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E266701" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24464" e_stop="25085"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATACAAACGCCCAAATCAGAGAAGGAAACAATGGAAGTATCAAGTGGCTTTAGCGTCAAAAATGATGAAGTTGTGAAGCTGATGGAGGAAATTGAGAAGCTGAAAGAAGAAAACAGAGTTCAACAGGAGCTTCTATCGCAGAAAGATGAAGAGAAAAGAGAGGTCATCAGGCAGCTCAGTTTAGCTATGGATTTGCTGAGGGAGGAAAACATTATGCTGAGGAAGAAGAGTGTTGCTACGCCAAAATCATCTCCAAAGAAGGAAAACATCTTCGAGTACAAGACACTAAAAGAAGGGTTCCGGAAAGCATCATCATCTCCAAAGAAGGAAAGCGTCATTGAGCTCAAGACATTCAAGGACGGGTTCTGGAAGAGGCTCTTCAATTGATCTCCTTATTCAGAGACTGCAATTTGATATCATTCTATGTTCTAGTTGTGCAGTATTGTTTCATTCTTTATAGTACTAATTTAGTTACTATAGTATGTAGGATTCATAAGTTCTCTTATTTCATTTGCTATTTCTAGTACTCTCTAAACTCATTCTTGTTGTTATTGGTCTGACCAATTTGTTGCAGTATATGTAATAAAGTATTACTAGTAATTTTCAGTTCTACATTCATG</genome_strand>
        <mrna_strand>AAATACAAACGCCCAAATCAGAGAAGGAAACAATGGAAGTATCAAGTGGCTTTAGCGTCAAAAATGATGAAGTTGTGAAGCTGATGGAGGAAATTGAGAAGCTGAAAGAAGAAAACAGAGTTCAACAGGAGCTTCTATCGCAGAAAGATGAAGAGAAAAGAGAGGTCATCAGGCAGCTCAGTTTAGCTATGGATTTGCTGAGGGAGGAAAACATTATGCTGAGGAAGAAGAGTGTTGCTACGCCAAAATCATCTCCAAAGAAGGAAAACATCTTCGAGTACAAGACACTAAAAGAAGGGTTCCGGAAAGCATCATCATCTCCAAAGAAGGAAAGCGTCATTGAGCTCAAGACATTCAAGGACGGGTTCTGGAAGAGGCTCTTCAATTGATCTCCTTATTCAGAGACTGCAATTTGATATCATTCTATGTTCTAGTTGTGCAGTATTGTTTCATTCTTTATAGTACTAATTTAGTTACTATAGTATGTAGGATTCATAAGTTCTCTTATTTCATTTGCTATTTCTAGTACTCTCTAAACTCATTCTTGCTGTTATTGGTCTGACCAATTTGTTGCAGTATATGTAATAAAGTATTACTAGTAATTTTCAGTTCTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E219084" ref_strand="+" ref_description="SGN-E219084 [cLEL-11-N18](-)">
      <seq>cgtctgtaggtttgaattgcccacagatgatcctgaatacgaagaggagcgcaagaagcgaggagcatgtgttactagcagtggttcttcgagctcaagtgaggcgccaggtgctgccgctgctgctgatgatagtagtcctagttgcctttgattgctgctttgtggtaaactcagccattggcattcttttttagctttgtctcttgcttcttttttggtatttggtgattgttttccagtgtaattccaccctctccgcatttcttgaatgtaataatctgtttatcttaatgctggtatgaattcgccatttgaatcctacatattatacaaactatattacttcttttagacaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="26098" stop="25132"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25798" g_stop="25425" g_length="374"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="374" r_length="374" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E219084" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>374</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E219084" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25798" e_stop="25425"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTCTGTAGGTTTGAATTGCCCACAGATGATCCTGAATACGAAGAGGAGCGCAAGAAGCGAGGAGCATGTGTTACTAGCAGTGGTTCTTCGAGCTCAAGTGAGGCGCCAGGTGCTGCCGCTGCTGCTGATGATAGTAGTCCTAGTTGCCTTTGATTGCTGCTTTGTGGTAAACTCAGCCATTGGCATTCTTTTTTAGCTTTGTCTCTTGCTTCTTTTTTGGTATTTGGTGATTGTTTTCCAGTGTAATTCCACCCTCTCCGCATTTCTTGAATGTAATAATCTGTTTATCTTAATGCTGGTATGAATTCGCCATTTGAATCCTACATATTATACAAACTATATTACTTCTTTTAGACAACAAAAAGACTCAATC</genome_strand>
        <mrna_strand>CGTCTGTAGGTTTGAATTGCCCACAGATGATCCTGAATACGAAGAGGAGCGCAAGAAGCGAGGAGCATGTGTTACTAGCAGTGGTTCTTCGAGCTCAAGTGAGGCGCCAGGTGCTGCCGCTGCTGCTGATGATAGTAGTCCTAGTTGCCTTTGATTGCTGCTTTGTGGTAAACTCAGCCATTGGCATTCTTTTTTAGCTTTGTCTCTTGCTTCTTTTTTGGTATTTGGTGATTGTTTTCCAGTGTAATTCCACCCTCTCCGCATTTCTTGAATGTAATAATCTGTTTATCTTAATGCTGGTATGAATTCGCCATTTGAATCCTACATATTATACAAACTATATTACTTCTTTTAGACAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E369329" ref_strand="+" ref_description="SGN-E369329 [TUS-25-G12](-)">
      <seq>ggctacgtgacttcgccgccagagctgccaatcggcgaaaccggattctggactgggcagagattctgatgggactggaagaccactctattgagctccggttacaagttcctgatggcgatggctacgtcgggaaccctggagactatgtggacgcagagggttatgaagctttactgcaaaccctagccgagagtgatggtggtggaagacgaggagctccaccagcttccaagagtgcaattgagggtctcaatacattggtgatcaaggaagagcaggaggtaatggcatgtgccatttgtaaagatgtagtgaatgtgggcgaaatggctaagaatttgccctgtggtcatggttaccatgatgattgtatagttcaatggttgggttcaaggaattcttgtcccgtctgtaggtttgaattgcccacagatgatcctgaatacgaagaggagcgcaagaagcgaggagcatgtgttactagcagtggttcttcgagctcaagtgaggcgccaggtgctgccgctgctgctgatgatagtagtcctagttgcctttgattgctgctttgtggtaaactcagccattggcattcttttttagctttgtctcttgcttcttttttggtatttggtgattgttttccagtgtaattccaccctctccgcatttcttgaatgtaataatctgtttatcttaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="26507" stop="25205"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26207" g_stop="25504" g_length="704"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="704" r_length="704" r_score="0.999"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25503" i_stop="25444" i_length="60">
            <donor d_prob="0.726" d_score="0.98"/>
            <acceptor a_prob="0.265" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25443" g_stop="25436" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="705" r_stop="712" r_length="8" r_score="0.750"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E369329" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>712</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E369329" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26207" e_stop="25504"/>
          <exon e_start="25443" e_stop="25436"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCTACGTGACTTCGCCGCCAGAGCTGCCAATCGGCGAAACCGGATTCTGGACTGGGCAGAGATTCTGATGGGACTGGAAGACCACTCTATTGAGCTCCGGTTACAAGTTCCTGATGGCGATGGCTACGTCGGGAACCCTGGAGACTATGTGGACGCAGAGGGTTATGAAGCTTTACTGCAAACCCTAGCCGAGAGTGATGGTGGTGGAAGACGAGGAGCTCCACCAGCTTCCAAGAGTGCAATTGAGGGTCTCAATACATTGGTGATCAAGGAAGAGCAGGAGGTAATGGCATGTGCCATTTGTAAAGATGTAGTGAATGTGGGCGAAATGGCTAAGAATTTGCCCTGTGGTCATGGTTACCATGATGATTGTATAGTTCAATGGTTGGGTTCAAGGAATTCTTGTCCCGTCTGTAGGTTTGAATTGCCCACAGATGATCCTGAATACGAAGAGGAGCGCAAGAAGCGAGGAGCATGTGTTACTAGCAGTGGTTCTTCGAGCTCAAGTGAGGCGCCAGGTGCTGCCGCTGCTGCTGATGATAGTAGTCCTAGTTGCCTTTGATTGCTGCTTTGTGGTAAACTCAGCCATTGGCATTCTTTTTTAGCTTTGTCTCTTGCTTCTTTTTTGGTATTTGGTGATTGTTTTCCAGTGTAATTCCACCCTCTCCGCATTTCTTGAATGTAATAATCTGTTTATCTTAATGCTGGTATGAATTCGCCATTTGAATCCTACATATTATACAAACTATATTACTTCTTTTAGACAACAAA</genome_strand>
        <mrna_strand>GGCTACGTGACTTCGCCGCCAGAGCTGCCAATCGGCGAAACCGGATTCTGGACTGGGCAGAGATTCTGATGGGACTGGAAGACCACTCTATTGAGCTCCGGTTACAAGTTCCTGATGGCGATGGCTACGTCGGGAACCCTGGAGACTATGTGGACGCAGAGGGTTATGAAGCTTTACTGCAAACCCTAGCCGAGAGTGATGGTGGTGGAAGACGAGGAGCTCCACCAGCTTCCAAGAGTGCAATTGAGGGTCTCAATACATTGGTGATCAAGGAAGAGCAGGAGGTAATGGCATGTGCCATTTGTAAAGATGTAGTGAATGTGGGCGAAATGGCTAAGAATTTGCCCTGTGGTCATGGTTACCATGATGATTGTATAGTTCAATGGTTGGGTTCAAGGAATTCTTGTCCCGTCTGTAGGTTTGAATTGCCCACAGATGATCCTGAATACGAAGAGGAGCGCAAGAAGCGAGGAGCATGTGTTACTAGCAGTGGTTCTTCGAGCTCAAGTGAGGCGCCAGGTGCTGCCGCTGCTGCTGATGATAGTAGTCCTAGTTGCCTTTGATTGCTGCTTTGTGGTAAACTCAGCCATTGGCATTCTTTTTTAGCTTTGTCTCTTGCTTCTTTTTTGGTATTTGGTGATTGTTTTCCAGTGTAATTCCACCCTCTCCGCATTTCTTGAATGTAATAATCTGTTTATCTTAAA............................................................AAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E371674" ref_strand="-" ref_description="SGN-E371674 [TUS-29-I24]">
      <seq>gctttactgcaaaccctagccgagagtgatggtggtggaagacgaggagctccaccagcttccaagagtgcaattgagggtctcaatacattggtgatcaaggaagagcaggaggtaatggcatgtgccatttgtaaagatgtagtgaatgtgggcgaaatggctaagaatttgccctgtggtcatggttaccatgatgattgtatagttcaatggttgggttcaaggaattcttgtcccgtctgtaggtttgaattgcccacagatgatcctgaatacgaagaggagcgcaagaagcgaggagcatgtgttactaacagtggttcttcgagctcaaatgaggcgccaggtgctgccgctgctgatgatgatagtagtcctagttgcctttgattgctgctttgtggtaaactcagccattggcattcttttttagctttgtctcttgcttcttttttggtatttggtgattgttttccagtgtaattccaccctctccgcatttcttgaatgtaataatctgtttatcttaatgctggtatgaattcgccatttaaaaaaaaaaaaaaaaaaaaactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="26337" stop="25180"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26037" g_stop="25481" g_length="557"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="557" r_length="557" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="558" polyA_stop="577"/>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E371674" ref_strand="-">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="0.962" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E371674" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="26037" e_stop="25481"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTTACTGCAAACCCTAGCCGAGAGTGATGGTGGTGGAAGACGAGGAGCTCCACCAGCTTCCAAGAGTGCAATTGAGGGTCTCAATACATTGGTGATCAAGGAAGAGCAGGAGGTAATGGCATGTGCCATTTGTAAAGATGTAGTGAATGTGGGCGAAATGGCTAAGAATTTGCCCTGTGGTCATGGTTACCATGATGATTGTATAGTTCAATGGTTGGGTTCAAGGAATTCTTGTCCCGTCTGTAGGTTTGAATTGCCCACAGATGATCCTGAATACGAAGAGGAGCGCAAGAAGCGAGGAGCATGTGTTACTAGCAGTGGTTCTTCGAGCTCAAGTGAGGCGCCAGGTGCTGCCGCTGCTGCTGATGATAGTAGTCCTAGTTGCCTTTGATTGCTGCTTTGTGGTAAACTCAGCCATTGGCATTCTTTTTTAGCTTTGTCTCTTGCTTCTTTTTTGGTATTTGGTGATTGTTTTCCAGTGTAATTCCACCCTCTCCGCATTTCTTGAATGTAATAATCTGTTTATCTTAATGCTGGTATGAATTCGCCATTTGA</genome_strand>
        <mrna_strand>GCTTTACTGCAAACCCTAGCCGAGAGTGATGGTGGTGGAAGACGAGGAGCTCCACCAGCTTCCAAGAGTGCAATTGAGGGTCTCAATACATTGGTGATCAAGGAAGAGCAGGAGGTAATGGCATGTGCCATTTGTAAAGATGTAGTGAATGTGGGCGAAATGGCTAAGAATTTGCCCTGTGGTCATGGTTACCATGATGATTGTATAGTTCAATGGTTGGGTTCAAGGAATTCTTGTCCCGTCTGTAGGTTTGAATTGCCCACAGATGATCCTGAATACGAAGAGGAGCGCAAGAAGCGAGGAGCATGTGTTACTAACAGTGGTTCTTCGAGCTCAAATGAGGCGCCAGGTGCTGCCGCTGCTGATGATGATAGTAGTCCTAGTTGCCTTTGATTGCTGCTTTGTGGTAAACTCAGCCATTGGCATTCTTTTTTAGCTTTGTCTCTTGCTTCTTTTTTGGTATTTGGTGATTGTTTTCCAGTGTAATTCCACCCTCTCCGCATTTCTTGAATGTAATAATCTGTTTATCTTAATGCTGGTATGAATTCGCCATTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E280508" ref_strand="-" ref_description="SGN-E280508 [cLER-1-K11]">
      <seq>gcttccaagagtgcaattgagggtctcaatacattggtgatcaaggaagagcaggaggtaatggcatgtgccatttgtaaagatgtagtgaatgtgggcgaaatggctaagaatttgccctgtggtcatggttaccatgatgattgtatagttcaatggttgggttcaaggaattcttgtcccgtctgtaggtttgaattgcccacagatgatcctgaatacgaagaggagcgcaagaagcgaggagcatgtgttactagcagtggttcttcgagctcaagtgaggcgccaggtgctgccgctgctgctgatgatagtagtcctagttgcctttgattgctgctttgtggtaaactcagccattggcattcttttttagctttgtctcttgcttcttttttggtatttggtgattgttttccagtgtaattccaccctctccgcatttcttgaatgtaataatctgtttatcttaatgctggtatgaattcgccatttgaaaaaaaaaaaaaaaaaaaactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="26280" stop="25180"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25980" g_stop="25481" g_length="500"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="500" r_length="500" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="501" polyA_stop="520"/>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E280508" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>500</cumulative_length_of_scored_exons>
        <coverage percentage="0.958" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E280508" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="25980" e_stop="25481"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTCCAAGAGTGCAATTGAGGGTCTCAATACATTGGTGATCAAGGAAGAGCAGGAGGTAATGGCATGTGCCATTTGTAAAGATGTAGTGAATGTGGGCGAAATGGCTAAGAATTTGCCCTGTGGTCATGGTTACCATGATGATTGTATAGTTCAATGGTTGGGTTCAAGGAATTCTTGTCCCGTCTGTAGGTTTGAATTGCCCACAGATGATCCTGAATACGAAGAGGAGCGCAAGAAGCGAGGAGCATGTGTTACTAGCAGTGGTTCTTCGAGCTCAAGTGAGGCGCCAGGTGCTGCCGCTGCTGCTGATGATAGTAGTCCTAGTTGCCTTTGATTGCTGCTTTGTGGTAAACTCAGCCATTGGCATTCTTTTTTAGCTTTGTCTCTTGCTTCTTTTTTGGTATTTGGTGATTGTTTTCCAGTGTAATTCCACCCTCTCCGCATTTCTTGAATGTAATAATCTGTTTATCTTAATGCTGGTATGAATTCGCCATTTGA</genome_strand>
        <mrna_strand>GCTTCCAAGAGTGCAATTGAGGGTCTCAATACATTGGTGATCAAGGAAGAGCAGGAGGTAATGGCATGTGCCATTTGTAAAGATGTAGTGAATGTGGGCGAAATGGCTAAGAATTTGCCCTGTGGTCATGGTTACCATGATGATTGTATAGTTCAATGGTTGGGTTCAAGGAATTCTTGTCCCGTCTGTAGGTTTGAATTGCCCACAGATGATCCTGAATACGAAGAGGAGCGCAAGAAGCGAGGAGCATGTGTTACTAGCAGTGGTTCTTCGAGCTCAAGTGAGGCGCCAGGTGCTGCCGCTGCTGCTGATGATAGTAGTCCTAGTTGCCTTTGATTGCTGCTTTGTGGTAAACTCAGCCATTGGCATTCTTTTTTAGCTTTGTCTCTTGCTTCTTTTTTGGTATTTGGTGATTGTTTTCCAGTGTAATTCCACCCTCTCCGCATTTCTTGAATGTAATAATCTGTTTATCTTAATGCTGGTATGAATTCGCCATTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E246069" ref_strand="+" ref_description="SGN-E246069 [cLEF-40-A13]">
      <seq>cctttttttttaagataaacagattattacattcaagaaatgcggagagggtggaattacactggaaaacaatcaccaaataccaaaaaagaagcaagagacaaagctaaaaaagaatgccaatggctgagtttaccacaaagcagcaatcaaaggcaactaggactactatcatcagcagcagcggcagcacctggcgcctcacttgagctcgaagaaccactgctagtaacacatgctcctcgcttcttgcgctcctcttcgtattcaggatcatctgtgggcaattcaaacctacagacgggacaagaattccttgaacccaaccattgaactatacaatcatcatggtaaccatgaccacagggcaaattcttagccatttcgcccacattcactacatctttacaaatggcacatgccattacctcctgctcttccttgatcaccaatgtattgagaccctcaattgcactcttggaagctggtggagctcctcgtcttccaccaccatcactctcggctagggtttgcagtaaagcttcataaccctctgcgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="+" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="25205" stop="26354"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25503" g_stop="26054" g_length="552"/>
          <reference_exon_boundary r_type="cDNA" r_start="8" r_stop="559" r_length="552" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="+" ref_id="SGN-E246069" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E246069" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25503" e_stop="26054"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTAAGATAAACAGATTATTACATTCAAGAAATGCGGAGAGGGTGGAATTACACTGGAAAACAATCACCAAATACCAAAAAAGAAGCAAGAGACAAAGCTAAAAAAGAATGCCAATGGCTGAGTTTACCACAAAGCAGCAATCAAAGGCAACTAGGACTACTATCATCAGCAGCAGCGGCAGCACCTGGCGCCTCACTTGAGCTCGAAGAACCACTGCTAGTAACACATGCTCCTCGCTTCTTGCGCTCCTCTTCGTATTCAGGATCATCTGTGGGCAATTCAAACCTACAGACGGGACAAGAATTCCTTGAACCCAACCATTGAACTATACAATCATCATGGTAACCATGACCACAGGGCAAATTCTTAGCCATTTCGCCCACATTCACTACATCTTTACAAATGGCACATGCCATTACCTCCTGCTCTTCCTTGATCACCAATGTATTGAGACCCTCAATTGCACTCTTGGAAGCTGGTGGAGCTCCTCGTCTTCCACCACCATCACTCTCGGCTAGGGTTTGCAGTAAAGCTTCATAACCCTCTGCGT</genome_strand>
        <mrna_strand>TTTTAAGATAAACAGATTATTACATTCAAGAAATGCGGAGAGGGTGGAATTACACTGGAAAACAATCACCAAATACCAAAAAAGAAGCAAGAGACAAAGCTAAAAAAGAATGCCAATGGCTGAGTTTACCACAAAGCAGCAATCAAAGGCAACTAGGACTACTATCATCAGCAGCAGCGGCAGCACCTGGCGCCTCACTTGAGCTCGAAGAACCACTGCTAGTAACACATGCTCCTCGCTTCTTGCGCTCCTCTTCGTATTCAGGATCATCTGTGGGCAATTCAAACCTACAGACGGGACAAGAATTCCTTGAACCCAACCATTGAACTATACAATCATCATGGTAACCATGACCACAGGGCAAATTCTTAGCCATTTCGCCCACATTCACTACATCTTTACAAATGGCACATGCCATTACCTCCTGCTCTTCCTTGATCACCAATGTATTGAGACCCTCAATTGCACTCTTGGAAGCTGGTGGAGCTCCTCGTCTTCCACCACCATCACTCTCGGCTAGGGTTTGCAGTAAAGCTTCATAACCCTCTGCGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E220572" ref_strand="+" ref_description="SGN-E220572 [cLEL-12-A23](-)">
      <seq>tttgccctgtggtcatggttaccatgatgattgtatagttcaatggttgggttcaaggaattcttgtcccgtctgtaggtttgaattgcccacagatgatcctgaatacgaagaggagcgcaagaagcgaggagcatgtgttactagcagtggttcttcgagctcaagttaggcgccaggtgctgccgctgctgctgatgatagtagtcctagttgcctttgattgatgctttgtggtaaactcagccattggcattcttttttagctttgtctcttgcttcttttttggtatttggtgattgttttccagtgtaattccaccctctccgcatttcttgcatgtaataatctgtttatcttaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="26167" stop="25205"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25867" g_stop="25504" g_length="364"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="364" r_length="364" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="365" polyA_stop="384"/>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E220572" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>364</cumulative_length_of_scored_exons>
        <coverage percentage="0.948" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E220572" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25867" e_stop="25504"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGCCCTGTGGTCATGGTTACCATGATGATTGTATAGTTCAATGGTTGGGTTCAAGGAATTCTTGTCCCGTCTGTAGGTTTGAATTGCCCACAGATGATCCTGAATACGAAGAGGAGCGCAAGAAGCGAGGAGCATGTGTTACTAGCAGTGGTTCTTCGAGCTCAAGTGAGGCGCCAGGTGCTGCCGCTGCTGCTGATGATAGTAGTCCTAGTTGCCTTTGATTGCTGCTTTGTGGTAAACTCAGCCATTGGCATTCTTTTTTAGCTTTGTCTCTTGCTTCTTTTTTGGTATTTGGTGATTGTTTTCCAGTGTAATTCCACCCTCTCCGCATTTCTTGAATGTAATAATCTGTTTATCTTAAT</genome_strand>
        <mrna_strand>TTTGCCCTGTGGTCATGGTTACCATGATGATTGTATAGTTCAATGGTTGGGTTCAAGGAATTCTTGTCCCGTCTGTAGGTTTGAATTGCCCACAGATGATCCTGAATACGAAGAGGAGCGCAAGAAGCGAGGAGCATGTGTTACTAGCAGTGGTTCTTCGAGCTCAAGTTAGGCGCCAGGTGCTGCCGCTGCTGCTGATGATAGTAGTCCTAGTTGCCTTTGATTGATGCTTTGTGGTAAACTCAGCCATTGGCATTCTTTTTTAGCTTTGTCTCTTGCTTCTTTTTTGGTATTTGGTGATTGTTTTCCAGTGTAATTCCACCCTCTCCGCATTTCTTGCATGTAATAATCTGTTTATCTTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E709221" ref_strand="+" ref_description="SGN-E709221 [FA51AC03]">
      <seq>cgacgtctccggctacgtgacttcgccgccagagctgccaatcggcgaaaccggattctggactgggcagagattctgatgggactggaagaccactctattgagctccggttacaagttcctgatggcgatggctacgtcgggaaccctggagactatgtggacgcagagggttatgaagctttactgcaaaccctagccgagagtgatggtggtggaagacgaggagctccaccagcttccaagagtgcaattgagggtctcaatacattggtgatcaaggaagagcaggaggtaatggcatgtgccatttgtaaagatgtagtgaatgtgggcgaaatggctaagaatttgccctgtggtcatggttaccatgatgattgtatagttcaatggttgggttcaaggaattcttgtcccgtctgtaggtttgaattgcccacagatgatcctgaatacgaagaggagcgcaagaagcgaggagcatgtgttactagcagtggttcttcgagctcaagtgaggcgccaggtgctgccgctgctgctgatgatagtagtcctagttgcctttgattgctgctttgtggtaaactcagccattggcattcttttttagctttgtctcttgcttcttttttggtatttggtgattgttttccagtgtaattccaccctctccgcatttcttgaatgtaataatctgtttatctta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="26517" stop="25206"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26217" g_stop="25506" g_length="712"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="712" r_length="712" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E709221" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>712</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E709221" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26217" e_stop="25506"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACGTCTCCGGCTACGTGACTTCGCCGCCAGAGCTGCCAATCGGCGAAACCGGATTCTGGACTGGGCAGAGATTCTGATGGGACTGGAAGACCACTCTATTGAGCTCCGGTTACAAGTTCCTGATGGCGATGGCTACGTCGGGAACCCTGGAGACTATGTGGACGCAGAGGGTTATGAAGCTTTACTGCAAACCCTAGCCGAGAGTGATGGTGGTGGAAGACGAGGAGCTCCACCAGCTTCCAAGAGTGCAATTGAGGGTCTCAATACATTGGTGATCAAGGAAGAGCAGGAGGTAATGGCATGTGCCATTTGTAAAGATGTAGTGAATGTGGGCGAAATGGCTAAGAATTTGCCCTGTGGTCATGGTTACCATGATGATTGTATAGTTCAATGGTTGGGTTCAAGGAATTCTTGTCCCGTCTGTAGGTTTGAATTGCCCACAGATGATCCTGAATACGAAGAGGAGCGCAAGAAGCGAGGAGCATGTGTTACTAGCAGTGGTTCTTCGAGCTCAAGTGAGGCGCCAGGTGCTGCCGCTGCTGCTGATGATAGTAGTCCTAGTTGCCTTTGATTGCTGCTTTGTGGTAAACTCAGCCATTGGCATTCTTTTTTAGCTTTGTCTCTTGCTTCTTTTTTGGTATTTGGTGATTGTTTTCCAGTGTAATTCCACCCTCTCCGCATTTCTTGAATGTAATAATCTGTTTATCTTA</genome_strand>
        <mrna_strand>CGACGTCTCCGGCTACGTGACTTCGCCGCCAGAGCTGCCAATCGGCGAAACCGGATTCTGGACTGGGCAGAGATTCTGATGGGACTGGAAGACCACTCTATTGAGCTCCGGTTACAAGTTCCTGATGGCGATGGCTACGTCGGGAACCCTGGAGACTATGTGGACGCAGAGGGTTATGAAGCTTTACTGCAAACCCTAGCCGAGAGTGATGGTGGTGGAAGACGAGGAGCTCCACCAGCTTCCAAGAGTGCAATTGAGGGTCTCAATACATTGGTGATCAAGGAAGAGCAGGAGGTAATGGCATGTGCCATTTGTAAAGATGTAGTGAATGTGGGCGAAATGGCTAAGAATTTGCCCTGTGGTCATGGTTACCATGATGATTGTATAGTTCAATGGTTGGGTTCAAGGAATTCTTGTCCCGTCTGTAGGTTTGAATTGCCCACAGATGATCCTGAATACGAAGAGGAGCGCAAGAAGCGAGGAGCATGTGTTACTAGCAGTGGTTCTTCGAGCTCAAGTGAGGCGCCAGGTGCTGCCGCTGCTGCTGATGATAGTAGTCCTAGTTGCCTTTGATTGCTGCTTTGTGGTAAACTCAGCCATTGGCATTCTTTTTTAGCTTTGTCTCTTGCTTCTTTTTTGGTATTTGGTGATTGTTTTCCAGTGTAATTCCACCCTCTCCGCATTTCTTGAATGTAATAATCTGTTTATCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E700592" ref_strand="+" ref_description="SGN-E700592 [FA13CC07]">
      <seq>caatggccgaggccccttcagtccctgcaccaaccgggtcggatcctgattactggtgctaccagtgtgagacacgagttgccgtcgaaaccctacccgatctccccgcctcatagctgaggcggcgcttgacaacgacgcgccccctcccccgccttctgagcacgctgatccttccgatgacgatttcctccgtgtcgagctggacggttggggaaacgacgaagaggaggaggaggatgatgatgaagaggaggaggaggatgatgataatggaatcggggttagaattggcgatgacagagaaaatcgcgggaatcgaagccaatctgaggatgacgatgatgatgatgttgatgatgatgaagaagttgagaatagggatgatgatgaagaggatcttcggagaaggcggagggatgtgctacgtctccggctacgtgacttcgccgccagagctgccaatcggcgaaaccggattctggactgggcagagattctgatgggactggaagaccactctattgagctccggttacaagttcctgatggcgatggctacgtcgggaaccctggagactatgtggacgcagagggttatgaagctttactgcaaaccctagccgagagtgatggtggtggaagacgaggagctccaccagcttccaagagtgcaattgagggtctcaatacattggtgatcaaggaagagcaggaggtaatggcatgtgccatttgtaaagatgtagtgaatgtgggcgaaatggctaagaatttgcccctgtggtcatggttaccatgatgattgtatagttcaatggttgggttcaaggaattctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="27080" stop="25503"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26780" g_stop="26674" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="107" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26673" i_stop="26535" i_length="139">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26534" g_stop="25803" g_length="732"/>
          <reference_exon_boundary r_type="cDNA" r_start="108" r_stop="840" r_length="733" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E700592" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>839</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E700592" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26780" e_stop="26674"/>
          <exon e_start="26534" e_stop="25803"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATGGCCGAGGCCCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAAGAGGAGGAGGAGGATGATGATGAAGAGGAGGAGGAGGATGATGATAATGGAATCGGGGTTAGAATTGGCGATGACAGAGAAAATCGCGGGAATCGAAGCCAATCTGAGGATGACGATGATGATGATGTTGATGATGATGAAGAAGTTGAGAATAGGGATGATGATGAAGAGGATCTTCGGAGAAGGCGGAGGGATGTGCTACGTCTCCGGCTACGTGACTTCGCCGCCAGAGCTGCCAATCGGCGAAACCGGATTCTGGACTGGGCAGAGATTCTGATGGGACTGGAAGACCACTCTATTGAGCTCCGGTTACAAGTTCCTGATGGCGATGGCTACGTCGGGAACCCTGGAGACTATGTGGACGCAGAGGGTTATGAAGCTTTACTGCAAACCCTAGCCGAGAGTGATGGTGGTGGAAGACGAGGAGCTCCACCAGCTTCCAAGAGTGCAATTGAGGGTCTCAATACATTGGTGATCAAGGAAGAGCAGGAGGTAATGGCATGTGCCATTTGTAAAGATGTAGTGAATGTGGGCGAAATGGCTAAGAATTTG-CCCTGTGGTCATGGTTACCATGATGATTGTATAGTTCAATGGTTGGGTTCAAGGAATTCTT</genome_strand>
        <mrna_strand>CAATGGCCGAGGCCCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCC...........................................................................................................................................GCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAAGAGGAGGAGGAGGATGATGATGAAGAGGAGGAGGAGGATGATGATAATGGAATCGGGGTTAGAATTGGCGATGACAGAGAAAATCGCGGGAATCGAAGCCAATCTGAGGATGACGATGATGATGATGTTGATGATGATGAAGAAGTTGAGAATAGGGATGATGATGAAGAGGATCTTCGGAGAAGGCGGAGGGATGTGCTACGTCTCCGGCTACGTGACTTCGCCGCCAGAGCTGCCAATCGGCGAAACCGGATTCTGGACTGGGCAGAGATTCTGATGGGACTGGAAGACCACTCTATTGAGCTCCGGTTACAAGTTCCTGATGGCGATGGCTACGTCGGGAACCCTGGAGACTATGTGGACGCAGAGGGTTATGAAGCTTTACTGCAAACCCTAGCCGAGAGTGATGGTGGTGGAAGACGAGGAGCTCCACCAGCTTCCAAGAGTGCAATTGAGGGTCTCAATACATTGGTGATCAAGGAAGAGCAGGAGGTAATGGCATGTGCCATTTGTAAAGATGTAGTGAATGTGGGCGAAATGGCTAAGAATTTGCCCCTGTGGTCATGGTTACCATGATGATTGTATAGTTCAATGGTTGGGTTCAAGGAATTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E708523" ref_strand="+" ref_description="SGN-E708523 [FA36AA08]">
      <seq>caactatggccgaggccccttcagtccctgcaccaaccgggtcggatcctgattactggtgctaccagtgtgagacacgagttgccgtcgaaaccctacccgatctccccgccgatgtcatttgtaacaactgtaagagtggcttcgtcgagtccataccctcacgtgttgtatctgtctcaccggtgacggcgtctactgatcagatcgatgaccctgctttcggcaatcagttcatccaggttctccgcctcatagctgaggcggcgcttgacaacgacgcgccccctcccccgccttctgagcacgctgatccttccgatgacgatttcctccgtgtcgagctggacggttggggaaacgacgaagaggaggaggaggatgatgatgaagaggaggaggaggatgatgataatggaatcggggttagaattggcgatgacagagaaaatcgcgggaatcgaagccaatctgaggatgacgatgatgatgatgttgatgatgatgaagaagttgagaatagggatgatgatgaagaggatcttcggagaaggcggagggatgtgctacgtctccggctacgtgacttcgccgccagagctgccaatcggcgaaaccggattctggactgggcagagattctgatgggactggaagaccactctattgagctccggttacaagttcctgatggcgatggctacgtcgggaaccctggagactatgtggacgcagagggttatgaagctttactgcaaaccctagccgagagtgatggtggtggaagacgaggagctccaccagcttccaagagtgcaattgagggtctncatacattggtgatcaaagaagaacaggaggtaatggcatgtgccatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="27083" stop="25606"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26783" g_stop="25906" g_length="878"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="878" r_length="878" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E708523" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>878</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E708523" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26783" e_stop="25906"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACAATGGCCGAGGCCCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAAGAGGAGGAGGAGGATGATGATGAAGAGGAGGAGGAGGATGATGATAATGGAATCGGGGTTAGAATTGGCGATGACAGAGAAAATCGCGGGAATCGAAGCCAATCTGAGGATGACGATGATGATGATGTTGATGATGATGAAGAAGTTGAGAATAGGGATGATGATGAAGAGGATCTTCGGAGAAGGCGGAGGGATGTGCTACGTCTCCGGCTACGTGACTTCGCCGCCAGAGCTGCCAATCGGCGAAACCGGATTCTGGACTGGGCAGAGATTCTGATGGGACTGGAAGACCACTCTATTGAGCTCCGGTTACAAGTTCCTGATGGCGATGGCTACGTCGGGAACCCTGGAGACTATGTGGACGCAGAGGGTTATGAAGCTTTACTGCAAACCCTAGCCGAGAGTGATGGTGGTGGAAGACGAGGAGCTCCACCAGCTTCCAAGAGTGCAATTGAGGGTCTCAATACATTGGTGATCAAGGAAGAGCAGGAGGTAATGGCATGTGCCATT</genome_strand>
        <mrna_strand>CAACTATGGCCGAGGCCCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAAGAGGAGGAGGAGGATGATGATGAAGAGGAGGAGGAGGATGATGATAATGGAATCGGGGTTAGAATTGGCGATGACAGAGAAAATCGCGGGAATCGAAGCCAATCTGAGGATGACGATGATGATGATGTTGATGATGATGAAGAAGTTGAGAATAGGGATGATGATGAAGAGGATCTTCGGAGAAGGCGGAGGGATGTGCTACGTCTCCGGCTACGTGACTTCGCCGCCAGAGCTGCCAATCGGCGAAACCGGATTCTGGACTGGGCAGAGATTCTGATGGGACTGGAAGACCACTCTATTGAGCTCCGGTTACAAGTTCCTGATGGCGATGGCTACGTCGGGAACCCTGGAGACTATGTGGACGCAGAGGGTTATGAAGCTTTACTGCAAACCCTAGCCGAGAGTGATGGTGGTGGAAGACGAGGAGCTCCACCAGCTTCCAAGAGTGCAATTGAGGGTCTNCATACATTGGTGATCAAAGAAGAACAGGAGGTAATGGCATGTGCCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E707318" ref_strand="+" ref_description="SGN-E707318 [FA32CF11]">
      <seq>caataatggccgaggccccttcagtccctgcaccaaccgggtcggatcctgattactggtgctaccagtgtgagacacgagttgccgtcgaaaccctacccgatctccccgccgatgtcatttgtaacaactgtaagagtggcttcgtcgagtccataccctcacgtgttgtatctgtctcaccggtgacggcgtctactgatcagatcgatgaccctgctttcggcaatcagttcatccaggttctccgcctcatagctgaggcggcgcttgacaacgacgcgccccctcccccgccttctgagcacgctgatccttccgatgacgatttcctccgtgtcgagctggacggttggggaaacgacgaagaggaggaggaggatgatgatgaagaggaggaggaggatgatgataatggaatcggggttagaattggcgatgacagagaaaatcgcgggaatcgaagccaatctgaggatgacgatgatgatgatgttgatgatgatgaagaagttgagaatagggatgatgatgaagaggatcttcggagaaggcggagggatgtgctacgtctccggctacgtgacttcgccgccagagctgccaatcggcgaaaccggattctggactgggcagagattctgatgggactggaagaccactctattgagctccggttacaagttcctgatggcgatggctacgtcgggaaccctggagactatgtggacgcagagggttatgaagctttactgcaaaccctagccgagagtgatggtggtggaagacgaggagctccaccagcttccaagagtgcaattgagggtctcaatacattggtgatcaaggaagagcaagaggtaatggcatgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="27083" stop="25611"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26783" g_stop="25911" g_length="873"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="873" r_length="873" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E707318" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>873</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E707318" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26783" e_stop="25911"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACAATGGCCGAGGCCCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAAGAGGAGGAGGAGGATGATGATGAAGAGGAGGAGGAGGATGATGATAATGGAATCGGGGTTAGAATTGGCGATGACAGAGAAAATCGCGGGAATCGAAGCCAATCTGAGGATGACGATGATGATGATGTTGATGATGATGAAGAAGTTGAGAATAGGGATGATGATGAAGAGGATCTTCGGAGAAGGCGGAGGGATGTGCTACGTCTCCGGCTACGTGACTTCGCCGCCAGAGCTGCCAATCGGCGAAACCGGATTCTGGACTGGGCAGAGATTCTGATGGGACTGGAAGACCACTCTATTGAGCTCCGGTTACAAGTTCCTGATGGCGATGGCTACGTCGGGAACCCTGGAGACTATGTGGACGCAGAGGGTTATGAAGCTTTACTGCAAACCCTAGCCGAGAGTGATGGTGGTGGAAGACGAGGAGCTCCACCAGCTTCCAAGAGTGCAATTGAGGGTCTCAATACATTGGTGATCAAGGAAGAGCAGGAGGTAATGGCATGTG</genome_strand>
        <mrna_strand>CAATAATGGCCGAGGCCCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAAGAGGAGGAGGAGGATGATGATGAAGAGGAGGAGGAGGATGATGATAATGGAATCGGGGTTAGAATTGGCGATGACAGAGAAAATCGCGGGAATCGAAGCCAATCTGAGGATGACGATGATGATGATGTTGATGATGATGAAGAAGTTGAGAATAGGGATGATGATGAAGAGGATCTTCGGAGAAGGCGGAGGGATGTGCTACGTCTCCGGCTACGTGACTTCGCCGCCAGAGCTGCCAATCGGCGAAACCGGATTCTGGACTGGGCAGAGATTCTGATGGGACTGGAAGACCACTCTATTGAGCTCCGGTTACAAGTTCCTGATGGCGATGGCTACGTCGGGAACCCTGGAGACTATGTGGACGCAGAGGGTTATGAAGCTTTACTGCAAACCCTAGCCGAGAGTGATGGTGGTGGAAGACGAGGAGCTCCACCAGCTTCCAAGAGTGCAATTGAGGGTCTCAATACATTGGTGATCAAGGAAGAGCAAGAGGTAATGGCATGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E703497" ref_strand="+" ref_description="SGN-E703497 [FA21CF11]">
      <seq>caaaagtctccaacaatggccgaggccccttcagtccctgcaccaaccgggtcggatcctgattactggtgctaccagtgtgagacacgagttgccgtcgaaaccctacccgatctccccgccgatgtcatttgtaacaactgtaagagtggcttcgtcgagtccataccctcacgtgttgtatctgtctcaccggtgacggcgtctactgatcagatcgatgaccctgctttcggcaatcagttcatccaggttctccgcctcatagctgaggcggcgcttgacaacgacgcgccccctcccccgccttctgagcacgctgatccttccgatgacgatttcctccgtgtcgagctggacggttggggaaacgacgaagaggaggaggaggatgatgatgaagaggaggaggaggatgatgataatggaatcggggttagaattggcgatgacagagaaaatcgcgggaatcgaagccaatctgaggatgacgatgatgatgatgttgatgatgatgaagaagttgagaatagggatgatgatgaagaggatcttcggagaaggcggagggatgtgctacgtctccggctacgtgacttcgccgccagagctgccaatcggcgaaaccggattctggactgggcagagattctgatgggactggaagaccactctattgagctccggttacaagttcctgatggcgatggctacgtcgggaaccctggagactatgtggacgcagagggttatgaagctttactgcaaaccctanccgagagtgatggtggtggaagacgaggagctccaccagcttcccagaagtgcattgagggtctcaatacattggtgatcaagga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="27093" stop="25634"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26793" g_stop="25934" g_length="860"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="860" r_length="860" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E703497" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>860</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E703497" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26793" e_stop="25934"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAGTCTCCAACAATGGCCGAGGCCCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAAGAGGAGGAGGAGGATGATGATGAAGAGGAGGAGGAGGATGATGATAATGGAATCGGGGTTAGAATTGGCGATGACAGAGAAAATCGCGGGAATCGAAGCCAATCTGAGGATGACGATGATGATGATGTTGATGATGATGAAGAAGTTGAGAATAGGGATGATGATGAAGAGGATCTTCGGAGAAGGCGGAGGGATGTGCTACGTCTCCGGCTACGTGACTTCGCCGCCAGAGCTGCCAATCGGCGAAACCGGATTCTGGACTGGGCAGAGATTCTGATGGGACTGGAAGACCACTCTATTGAGCTCCGGTTACAAGTTCCTGATGGCGATGGCTACGTCGGGAACCCTGGAGACTATGTGGACGCAGAGGGTTATGAAGCTTTACTGCAAACCCTAGCCGAGAGTGATGGTGGTGGAAGACGAGGAGCTCCACCAGCTTCCAAG-AGTGCAATTGAGGGTCTCAATACATTGGTGATCAAGGA</genome_strand>
        <mrna_strand>CAAAAGTCTCCAACAATGGCCGAGGCCCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAAGAGGAGGAGGAGGATGATGATGAAGAGGAGGAGGAGGATGATGATAATGGAATCGGGGTTAGAATTGGCGATGACAGAGAAAATCGCGGGAATCGAAGCCAATCTGAGGATGACGATGATGATGATGTTGATGATGATGAAGAAGTTGAGAATAGGGATGATGATGAAGAGGATCTTCGGAGAAGGCGGAGGGATGTGCTACGTCTCCGGCTACGTGACTTCGCCGCCAGAGCTGCCAATCGGCGAAACCGGATTCTGGACTGGGCAGAGATTCTGATGGGACTGGAAGACCACTCTATTGAGCTCCGGTTACAAGTTCCTGATGGCGATGGCTACGTCGGGAACCCTGGAGACTATGTGGACGCAGAGGGTTATGAAGCTTTACTGCAAACCCTANCCGAGAGTGATGGTGGTGGAAGACGAGGAGCTCCACCAGCTTCCCAGAAGTGC-ATTGAGGGTCTCAATACATTGGTGATCAAGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E707915" ref_strand="+" ref_description="SGN-E707915 [FA34BC10]">
      <seq>cacaatggccgaggccccttcagtccctgcaccaaccgggtcggatcctgattactggtgctaccagtgtgagacacgagttgccgtcgaaaccctacccgatctccccgccgatgtcatttgtaacaactgtaagagtggcttcgtcgagtccataccctcacgtgttgtatctgtctcaccggtgacggcgtctactgatcagatcgatgaccctgctttcggcaatcagttcatccaggttctccgcctcatagctgaggcggcgcttgacaacgacgcgccccctcccccgccttctgagcacgctgatccttccgatgacgatttcctccgtgtcgagctggacggttggggaaacgacgaagaggaggaggaggatgatgatgaagaggaggaggaggatgatgataatggaatcggggttagaattggcgatgacagagaaaatcgcgggaatcgaagccaatctgaggatgacgatgatgatgatgttgatgatgatgaagaagttgagaatagggatgatgatgaagaggatcttcggagaaggcggagggatgtgctacgtctccggctacgtgacttcgccgccagagctgccaatcggcgaaaccggattctggactgggcagagattctgatgggactggaagaccactctattgagctccggttacaagttcctgatggcgatggctacgtcgggaaccctggagactatgtggacgcagagggttatgaagctttactgcaaaccctanccgagagtgatggtggtggaagacgaggagctccaccagcttccaagagtgcaattgagggtctcaatacattggtgatcaagga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="27081" stop="25634"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26782" g_stop="25934" g_length="849"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="849" r_length="849" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E707915" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>849</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E707915" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26782" e_stop="25934"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAATGGCCGAGGCCCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAAGAGGAGGAGGAGGATGATGATGAAGAGGAGGAGGAGGATGATGATAATGGAATCGGGGTTAGAATTGGCGATGACAGAGAAAATCGCGGGAATCGAAGCCAATCTGAGGATGACGATGATGATGATGTTGATGATGATGAAGAAGTTGAGAATAGGGATGATGATGAAGAGGATCTTCGGAGAAGGCGGAGGGATGTGCTACGTCTCCGGCTACGTGACTTCGCCGCCAGAGCTGCCAATCGGCGAAACCGGATTCTGGACTGGGCAGAGATTCTGATGGGACTGGAAGACCACTCTATTGAGCTCCGGTTACAAGTTCCTGATGGCGATGGCTACGTCGGGAACCCTGGAGACTATGTGGACGCAGAGGGTTATGAAGCTTTACTGCAAACCCTAGCCGAGAGTGATGGTGGTGGAAGACGAGGAGCTCCACCAGCTTCCAAGAGTGCAATTGAGGGTCTCAATACATTGGTGATCAAGGA</genome_strand>
        <mrna_strand>CACAATGGCCGAGGCCCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAAGAGGAGGAGGAGGATGATGATGAAGAGGAGGAGGAGGATGATGATAATGGAATCGGGGTTAGAATTGGCGATGACAGAGAAAATCGCGGGAATCGAAGCCAATCTGAGGATGACGATGATGATGATGTTGATGATGATGAAGAAGTTGAGAATAGGGATGATGATGAAGAGGATCTTCGGAGAAGGCGGAGGGATGTGCTACGTCTCCGGCTACGTGACTTCGCCGCCAGAGCTGCCAATCGGCGAAACCGGATTCTGGACTGGGCAGAGATTCTGATGGGACTGGAAGACCACTCTATTGAGCTCCGGTTACAAGTTCCTGATGGCGATGGCTACGTCGGGAACCCTGGAGACTATGTGGACGCAGAGGGTTATGAAGCTTTACTGCAAACCCTANCCGAGAGTGATGGTGGTGGAAGACGAGGAGCTCCACCAGCTTCCAAGAGTGCAATTGAGGGTCTCAATACATTGGTGATCAAGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E702140" ref_strand="+" ref_description="SGN-E702140 [FA17DF07]">
      <seq>gccgaggccccttcagtccctgcaccaaccgggtcggatcctgattactggtgctaccagtgtgagacacgagttgccgtcgaaaccctacccgatctccccgccgatgtcatttgtaacaactgtaagagtggcttcgtcgagtccataccctcacgtgttgtatctgtctcaccggtgacggcgtctactgatcagatcgatgaccctgctttcggcaatcagttcatccaggttctccgcctcatagctgaggcggcgcttgacaacgacgcgccccctcccccgccttctgagcacgctgatccttccgatgacgatttcctccgtgtcgagctggacggttggggaaacgacgaagaggaggaggaggatgatgatgaagaggaggaggaggatgatgataatggaatcggggttagaattggcgatgacagagaaaatcgcgggaatcgaagccaatctgaggatgacgatgatgatgatgttgatgatgatgaagaagttgagaatagggatgatgatgaagaggatcttcggagaaggcggagggatgtgctacgtctccggctacgtgacttcgccgccagagctgccaatcggcgaaaccggattctggactgggcagagattctgatgggactggaagaccactctattgagctccggttacaagttcctgatggcgatggctacgtcgggaaccctggagactatgtggacgcagagggttatgaagctttactgcaaaccctanccgagagtgatggtggtgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="27075" stop="25699"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26775" g_stop="25999" g_length="777"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="777" r_length="777" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E702140" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>777</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E702140" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26775" e_stop="25999"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCGAGGCCCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAAGAGGAGGAGGAGGATGATGATGAAGAGGAGGAGGAGGATGATGATAATGGAATCGGGGTTAGAATTGGCGATGACAGAGAAAATCGCGGGAATCGAAGCCAATCTGAGGATGACGATGATGATGATGTTGATGATGATGAAGAAGTTGAGAATAGGGATGATGATGAAGAGGATCTTCGGAGAAGGCGGAGGGATGTGCTACGTCTCCGGCTACGTGACTTCGCCGCCAGAGCTGCCAATCGGCGAAACCGGATTCTGGACTGGGCAGAGATTCTGATGGGACTGGAAGACCACTCTATTGAGCTCCGGTTACAAGTTCCTGATGGCGATGGCTACGTCGGGAACCCTGGAGACTATGTGGACGCAGAGGGTTATGAAGCTTTACTGCAAACCCTAGCCGAGAGTGATGGTGGTGGA</genome_strand>
        <mrna_strand>GCCGAGGCCCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAAGAGGAGGAGGAGGATGATGATGAAGAGGAGGAGGAGGATGATGATAATGGAATCGGGGTTAGAATTGGCGATGACAGAGAAAATCGCGGGAATCGAAGCCAATCTGAGGATGACGATGATGATGATGTTGATGATGATGAAGAAGTTGAGAATAGGGATGATGATGAAGAGGATCTTCGGAGAAGGCGGAGGGATGTGCTACGTCTCCGGCTACGTGACTTCGCCGCCAGAGCTGCCAATCGGCGAAACCGGATTCTGGACTGGGCAGAGATTCTGATGGGACTGGAAGACCACTCTATTGAGCTCCGGTTACAAGTTCCTGATGGCGATGGCTACGTCGGGAACCCTGGAGACTATGTGGACGCAGAGGGTTATGAAGCTTTACTGCAAACCCTANCCGAGAGTGATGGTGGTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E703274" ref_strand="+" ref_description="SGN-E703274 [FA21AB11]">
      <seq>caaaagtctccaacaatggccgaggccccttcagtccctgcaccaaccgggtcggatcctgattactggtgctaccagtgtgagacacgagttgccgtcgaaaccctacccgatctccccgccgatgtcatttgtaacaactgtaagagtggcttcgtcgagtccataccctcacgtgttgtatctgtctcaccggtgacggcgtctactgatcagatcgatgaccctgctttcggcaatcagttcatccaggttctccgcctcatagctgaggcggcgcttgacaacgacgcgccccctcccccgccttctgagcacgctgatccttccgatgacgatttcctccgtgtcgagctggacggttggggaaacgacgaagaggaggaggaggatgatgatgaagaggaggaggaggatgatgataatggaatcggggttagaattggcgatgacagagaaaatcgcgggaatcgaagccaatctgaggatgacgatgatgatgatgttgatgatgatgaagaagttgagaatagggatgatgatgaagaggatcttcggagaaggcggagggatgtgctacgtctccggctacgtgacttcgccgccagagctgccaatcggcgaaaccggattctggactgggcagagattctgatgggactggaagaccactctattgagctccggttacaagttcctgatggcgatggctacgtcgggaaccctggagactatgtggacgcagagggttatgaagctttactgcaaaccctanccgagagtgatggtggtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="27093" stop="25701"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26793" g_stop="26001" g_length="793"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="793" r_length="793" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E703274" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>793</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E703274" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26793" e_stop="26001"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAGTCTCCAACAATGGCCGAGGCCCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAAGAGGAGGAGGAGGATGATGATGAAGAGGAGGAGGAGGATGATGATAATGGAATCGGGGTTAGAATTGGCGATGACAGAGAAAATCGCGGGAATCGAAGCCAATCTGAGGATGACGATGATGATGATGTTGATGATGATGAAGAAGTTGAGAATAGGGATGATGATGAAGAGGATCTTCGGAGAAGGCGGAGGGATGTGCTACGTCTCCGGCTACGTGACTTCGCCGCCAGAGCTGCCAATCGGCGAAACCGGATTCTGGACTGGGCAGAGATTCTGATGGGACTGGAAGACCACTCTATTGAGCTCCGGTTACAAGTTCCTGATGGCGATGGCTACGTCGGGAACCCTGGAGACTATGTGGACGCAGAGGGTTATGAAGCTTTACTGCAAACCCTAGCCGAGAGTGATGGTGGTG</genome_strand>
        <mrna_strand>CAAAAGTCTCCAACAATGGCCGAGGCCCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAAGAGGAGGAGGAGGATGATGATGAAGAGGAGGAGGAGGATGATGATAATGGAATCGGGGTTAGAATTGGCGATGACAGAGAAAATCGCGGGAATCGAAGCCAATCTGAGGATGACGATGATGATGATGTTGATGATGATGAAGAAGTTGAGAATAGGGATGATGATGAAGAGGATCTTCGGAGAAGGCGGAGGGATGTGCTACGTCTCCGGCTACGTGACTTCGCCGCCAGAGCTGCCAATCGGCGAAACCGGATTCTGGACTGGGCAGAGATTCTGATGGGACTGGAAGACCACTCTATTGAGCTCCGGTTACAAGTTCCTGATGGCGATGGCTACGTCGGGAACCCTGGAGACTATGTGGACGCAGAGGGTTATGAAGCTTTACTGCAAACCCTANCCGAGAGTGATGGTGGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E730367" ref_strand="+" ref_description="SGN-E730367 [LA23DF05]">
      <seq>cccttcagtcactgcaccaaccgcgtctgatcctgattactggtgctaccagtgtgagacacgagttgccgtcgaaaccctacccgatctccccgccgatgtcatttgtaacaactgtaagagtggcttcgtcgagtccataccctcacgtgttgtatctgtctcaccggtgacggcgtctactgatcagatcgatgaccctgctttcggcaatcagttcatccaggttctccgcctcatagctgaggcggcgcttgacaacgacgcgccccctcccccgccttctgagcacgctgatccttccgatgacgatttcctccgtgtcgagctggacggttggggaaacgacgaagaggaggaggaggatgatgatgaagaggaggaggaggatgatgataatggaatcggggttagaattggcgatgacagagaaaatcgcgggaatcgaagccaatctgaggatgacgatgatgatgatgttgatgatgatgaagaagttgagaatagggatgatgatgaagaggatcttcggagaaggcggagggatgtgctacgtctccggctacgtgacttcgccgccagagctgccaatcggcgaaaccggattctggactgggcagagattctgatgggactggaagaccactctattgagctccggttacaagctcctgatggcgatggcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="27067" stop="25781"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26767" g_stop="26081" g_length="687"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="687" r_length="687" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E730367" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>687</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E730367" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26767" e_stop="26081"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAAGAGGAGGAGGAGGATGATGATGAAGAGGAGGAGGAGGATGATGATAATGGAATCGGGGTTAGAATTGGCGATGACAGAGAAAATCGCGGGAATCGAAGCCAATCTGAGGATGACGATGATGATGATGTTGATGATGATGAAGAAGTTGAGAATAGGGATGATGATGAAGAGGATCTTCGGAGAAGGCGGAGGGATGTGCTACGTCTCCGGCTACGTGACTTCGCCGCCAGAGCTGCCAATCGGCGAAACCGGATTCTGGACTGGGCAGAGATTCTGATGGGACTGGAAGACCACTCTATTGAGCTCCGGTTACAAGTTCCTGATGGCGATGGCTA</genome_strand>
        <mrna_strand>CCCTTCAGTCACTGCACCAACCGCGTCTGATCCTGATTACTGGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAAGAGGAGGAGGAGGATGATGATGAAGAGGAGGAGGAGGATGATGATAATGGAATCGGGGTTAGAATTGGCGATGACAGAGAAAATCGCGGGAATCGAAGCCAATCTGAGGATGACGATGATGATGATGTTGATGATGATGAAGAAGTTGAGAATAGGGATGATGATGAAGAGGATCTTCGGAGAAGGCGGAGGGATGTGCTACGTCTCCGGCTACGTGACTTCGCCGCCAGAGCTGCCAATCGGCGAAACCGGATTCTGGACTGGGCAGAGATTCTGATGGGACTGGAAGACCACTCTATTGAGCTCCGGTTACAAGCTCCTGATGGCGATGGCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E299969" ref_strand="+" ref_description="SGN-E299969 [cLEW-11-C16]">
      <seq>tttgtaacaactgtaagagtggcttcgtcgagtccataccctcacgtgttgtatctgtctcaccggtgacggcgtctactgatcagatcgatgaccctgctttcggcaatcagttcatccaggttctccgcctcatagctgaggcggcgcttgacaacgacgcgccccctcccccgccttctgagcacgctgatccttccgatgacgatttcctccgtgtcgagctggacggttggggaaacgacgaagaggaggaggaggatgatgatgaagaggaggaggaggatgatgataatggaatcggggttagaattggcgatgacagagaaaatcgcgggaatcgaagccaatctgaggatgacgatgatgatgatgttgatgatgatgaagaagttgagaatagggatgatgatgaagaggatcttcggagaaggcggagggatgtgctacgtctccggctacgtgacttcgccgccagagctgccaatcggcgaaaccggattctggactgggcagagattctgatgggactggaagaccactctattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="26963" stop="25814"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26663" g_stop="26114" g_length="550"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="550" r_length="550" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E299969" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>550</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E299969" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26663" e_stop="26114"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAAGAGGAGGAGGAGGATGATGATGAAGAGGAGGAGGAGGATGATGATAATGGAATCGGGGTTAGAATTGGCGATGACAGAGAAAATCGCGGGAATCGAAGCCAATCTGAGGATGACGATGATGATGATGTTGATGATGATGAAGAAGTTGAGAATAGGGATGATGATGAAGAGGATCTTCGGAGAAGGCGGAGGGATGTGCTACGTCTCCGGCTACGTGACTTCGCCGCCAGAGCTGCCAATCGGCGAAACCGGATTCTGGACTGGGCAGAGATTCTGATGGGACTGGAAGACCACTCTATTGA</genome_strand>
        <mrna_strand>TTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAAGAGGAGGAGGAGGATGATGATGAAGAGGAGGAGGAGGATGATGATAATGGAATCGGGGTTAGAATTGGCGATGACAGAGAAAATCGCGGGAATCGAAGCCAATCTGAGGATGACGATGATGATGATGTTGATGATGATGAAGAAGTTGAGAATAGGGATGATGATGAAGAGGATCTTCGGAGAAGGCGGAGGGATGTGCTACGTCTCCGGCTACGTGACTTCGCCGCCAGAGCTGCCAATCGGCGAAACCGGATTCTGGACTGGGCAGAGATTCTGATGGGACTGGAAGACCACTCTATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E246463" ref_strand="+" ref_description="SGN-E246463 [cLEF-52-H3]">
      <seq>aagtctccaacaatggccgaggccccttcagtccctgcaccaaccgggtcggatcctgattactggtgctaccagtgtgagacacgagttgccgtcgaaaccctacccgatctccccgccgatgtcatttgtaacaactgtaagagtggcttcgtcgagtccataccctcacgtgttgtatctgtctcaccggtgacggcgtctactgatcagatcgatgaccctgctttcggcaatcagttcatccaggttctccgcctcatagctgaggcggcgcttgacaacgacgcgccccctcccccgccttctgagcacgctgatccttccgatgacgatttcctccgtgtcgagctggacggttggggaaacgacgaataggaggaggaggatgatgatgaagaggaggaggaggatgatgataatggaatcggggttagaattggcgatgacagagaaaatcgcgggaatcgaagccaatctgaggatgacgatgatgatgatgttgatgatgatgaagaagttgagaatagggatgatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="27090" stop="25950"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26790" g_stop="26250" g_length="541"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="541" r_length="541" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E246463" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>541</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246463" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26790" e_stop="26250"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTCTCCAACAATGGCCGAGGCCCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAAGAGGAGGAGGAGGATGATGATGAAGAGGAGGAGGAGGATGATGATAATGGAATCGGGGTTAGAATTGGCGATGACAGAGAAAATCGCGGGAATCGAAGCCAATCTGAGGATGACGATGATGATGATGTTGATGATGATGAAGAAGTTGAGAATAGGGATGATGATG</genome_strand>
        <mrna_strand>AAGTCTCCAACAATGGCCGAGGCCCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAATAGGAGGAGGAGGATGATGATGAAGAGGAGGAGGAGGATGATGATAATGGAATCGGGGTTAGAATTGGCGATGACAGAGAAAATCGCGGGAATCGAAGCCAATCTGAGGATGACGATGATGATGATGTTGATGATGATGAAGAAGTTGAGAATAGGGATGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E246391" ref_strand="+" ref_description="SGN-E246391 [cLEF-52-H15]">
      <seq>aagtctccaacaatggccgaggccccttcagtccctgcaccaaccgggtcggatcctgattactggtgctaccagtgtgagacacgagttgccgtcgaaaccctacccgatctccccgccgatgtcatttgtaacaactgtaagagtggcttcgtcgagtccataccctcacgtgttgtatctgtctcaccggtgacggcgtctactgatcagatcgatgaccctgctttcggcaatcagttcatccaggttctccgcctcatagctgaggcggcgcttgacaacgacgcgccccctcccccgccttctgagcacgctgatccttccgatgacgatttcctccgtgtcgagctggacggttggggaaacgacgaaaaggaggaggaggatgatgatgaagaggaggaggaggatgatgataatggaatcggggttagaattggcgatgacagagaaaatcgcgggaatcgaagccaatctgaggatgacgatgatgatgatgttgatgatgatgaagaagttgagaataaggatgatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="27090" stop="25951"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26790" g_stop="26251" g_length="540"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="540" r_length="540" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E246391" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>540</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246391" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26790" e_stop="26251"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTCTCCAACAATGGCCGAGGCCCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAAGAGGAGGAGGAGGATGATGATGAAGAGGAGGAGGAGGATGATGATAATGGAATCGGGGTTAGAATTGGCGATGACAGAGAAAATCGCGGGAATCGAAGCCAATCTGAGGATGACGATGATGATGATGTTGATGATGATGAAGAAGTTGAGAATAGGGATGATGAT</genome_strand>
        <mrna_strand>AAGTCTCCAACAATGGCCGAGGCCCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAAAAGGAGGAGGAGGATGATGATGAAGAGGAGGAGGAGGATGATGATAATGGAATCGGGGTTAGAATTGGCGATGACAGAGAAAATCGCGGGAATCGAAGCCAATCTGAGGATGACGATGATGATGATGTTGATGATGATGAAGAAGTTGAGAATAAGGATGATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E267861" ref_strand="+" ref_description="SGN-E267861 [cLEI-12-K18]">
      <seq>aacaatggccgaggccccttcagtccctgcaccaaccgggtcggatcctgattactggtgctaccagtgtgagacacgagttgccgtcgaaaccctacccgatctccccgccgatgtcatttgtaacaactgtaagagtggcttcgtcgagtccataccctcacgtgttgtatctgtctcaccggtgacggcgtctactgatcagatcgatgaccctgctttcggcaatcagttcatccaggttctccgcctcatagctgaggcggcgcttgacaacgacgcgccccctcccccgccttctgagcacgctgatccttccgatgacgatttcctccgtgtcgagctggacggttggggaaacgacgaagaggaggaggaggatgatgatgaagaggaggaggaggatgatgataatggaatcggggttagaattggcgatgacagagaaaatcgcgggaatcgaagccaatctgaggatgacgatgatgatgatgttgatgatgatggaaaagttgagaatagggatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="27082" stop="25954"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26782" g_stop="26254" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="529" r_length="529" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E267861" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E267861" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26782" e_stop="26254"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAATGGCCGAGGCCCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAAGAGGAGGAGGAGGATGATGATGAAGAGGAGGAGGAGGATGATGATAATGGAATCGGGGTTAGAATTGGCGATGACAGAGAAAATCGCGGGAATCGAAGCCAATCTGAGGATGACGATGATGATGATGTTGATGATGATGAAGAAGTTGAGAATAGGGATGAT</genome_strand>
        <mrna_strand>AACAATGGCCGAGGCCCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAAGAGGAGGAGGAGGATGATGATGAAGAGGAGGAGGAGGATGATGATAATGGAATCGGGGTTAGAATTGGCGATGACAGAGAAAATCGCGGGAATCGAAGCCAATCTGAGGATGACGATGATGATGATGTTGATGATGATGGAAAAGTTGAGAATAGGGATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E369330" ref_strand="+" ref_description="SGN-E369330 [TUS-25-G12]">
      <seq>tttttgttcccctaccaaaagtctccaacaatggccgaggccccttcagtccctgcaccaaccgggtcggatcctgattactggtgctaccagtgtgagacacgagttgccgtcgaaaccctacccgatctccccgccgatgtcatttgtaacaactgtaagagtggcttcgtcgagtccataccctcacgtgttgtatctgtctcaccggtgacggcgtctactgatcagatcgatgaccctgctttcggcaatcagttcatccaggttctccgcctcatagctgaggcggcgcttgacaacgacgcgccccctcccccgccttctgagcacgctgatccttccgatgacgatttcctccgtgtcgagctggacggttggggaaacgacgaagaggaggaggaggatgatgatgaagaggaggaggaggatgatgataatggaatcggggttagaattggcgatgacagagaaaatcgcgggaatcgaagccaatctgaggatgacgatgatgatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="27108" stop="25990"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26808" g_stop="26290" g_length="519"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="519" r_length="519" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E369330" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E369330" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26808" e_stop="26290"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTGTTCCCCTACCAAAAGTCTCCAACAATGGCCGAGGCCCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAAGAGGAGGAGGAGGATGATGATGAAGAGGAGGAGGAGGATGATGATAATGGAATCGGGGTTAGAATTGGCGATGACAGAGAAAATCGCGGGAATCGAAGCCAATCTGAGGATGACGATGATGATGAT</genome_strand>
        <mrna_strand>TTTTTGTTCCCCTACCAAAAGTCTCCAACAATGGCCGAGGCCCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAAGAGGAGGAGGAGGATGATGATGAAGAGGAGGAGGAGGATGATGATAATGGAATCGGGGTTAGAATTGGCGATGACAGAGAAAATCGCGGGAATCGAAGCCAATCTGAGGATGACGATGATGATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E555499" ref_strand="+" ref_description="SGN-E555499 [cTSC-4-G24]">
      <seq>tttttgttcccctaccaaaagtctccaacaatggccgaggccccttcagtccctgcaccaaccgggtcggatcctgattactggtgctaccagtgtgagacacgagttgccgtcgaaaccctacccgatctccccgccgatgtcatttgtaacaactgtaagagtggcttcgtcgagtccataccctcacgtgttgtatctgtctcaccggtgacggcgtctactgatcagatcgatgaccctgctttcggcaatcagttcatccaggttctccgcctcatagctgaggcggcgcttgacaacgacgcgccccctcccccgccttctgagcacgctgatccttccgatgacgatttcctccgtgtcgagctggacggttggggaaacgacgaagaggaggaggaggatgatgatgaagaggaggaggaggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="27108" stop="26077"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26808" g_stop="26377" g_length="432"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="432" r_length="432" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E555499" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>432</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E555499" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26808" e_stop="26377"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTGTTCCCCTACCAAAAGTCTCCAACAATGGCCGAGGCCCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAAGAGGAGGAGGAGGATGATGATGAAGAGGAGGAGGAGGAT</genome_strand>
        <mrna_strand>TTTTTGTTCCCCTACCAAAAGTCTCCAACAATGGCCGAGGCCCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAAGAGGAGGAGGAGGATGATGATGAAGAGGAGGAGGAGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E249117" ref_strand="+" ref_description="SGN-E249117 [cLEF-49-F14]">
      <seq>tttttgttcccctaccaaaagtctccaacaatgggcgaggccccttcagtccctgcaccaaccgggtcggatcctgattactggtgctaccagtgtgagacacgagttgccgtcgaaaccctacccgatctccccgccgatgtcatttgtaacaactgtaagagtggcttcgtcgagtccataccctcacgtgttgtatctgtctcaccggtgacggcgtctactgatcagatcgatgaccctgctttcggcaatcagttcatccaggttctccgcctcatagctgaggcggcgcttgacaacgacgcgccccctcccccgccttctgagcacgctgatccttccgatgacgatttcctccgtgtcgagctggacggttggggaaacgacgaagaggaggaggaggatgatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="27108" stop="26094"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26808" g_stop="26394" g_length="415"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="415" r_length="415" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E249117" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>415</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E249117" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26808" e_stop="26394"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTGTTCCCCTACCAAAAGTCTCCAACAATGGCCGAGGCCCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAAGAGGAGGAGGAGGATGATGATG</genome_strand>
        <mrna_strand>TTTTTGTTCCCCTACCAAAAGTCTCCAACAATGGGCGAGGCCCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAAGAGGAGGAGGAGGATGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E698588" ref_strand="+" ref_description="SGN-E698588 [FA06DF11]">
      <seq>ggtgctaccagtgtgagacacgagttgccgtcgaaaccctacccgatctccccgccgatgtcatttgtaacaactgtaacagtggcttcgtcgagtccataccctcacgtgttgtatctgtctcaccggcgacggcgtctactgatcacatcgatgaccctgctttcggcaatcagttcatccaggttctccgcctcatagctgaggcggcgcttgacaaccacgcgccccctcccccgccttctgaccacgctgatccttccgatgacgatttcctccgcgtccagctggacggttggggaaacgactaataggaggaggaggatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="27026" stop="26097"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26726" g_stop="26397" g_length="330"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="330" r_length="330" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E698588" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>330</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E698588" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26726" e_stop="26397"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAAGAGGAGGAGGAGGATGATG</genome_strand>
        <mrna_strand>GGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGTAACAACTGTAACAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGCGACGGCGTCTACTGATCACATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACCACGCGCCCCCTCCCCCGCCTTCTGACCACGCTGATCCTTCCGATGACGATTTCCTCCGCGTCCAGCTGGACGGTTGGGGAAACGACTAATAGGAGGAGGAGGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E284393" ref_strand="+" ref_description="SGN-E284393 [cLER-16-E12]">
      <seq>ggatatgggtatttagaatagcaaatgaaataagagtacttattagtcctcttttctgctttttgttcccctaccaaaagtctccaacaatggccgaggccccttcagtccctgcaccaaccgggtcggatcctgattactggtgctaccagtgtgagacacgagttgccgtcgaaaccctacccgatctccccgccgatgtcatttgtaacaactgtaagagtggcttcgtcgagtccataccctcacgtgttgtatctgtctcaccggtgacggcgtctactgatcagatcgatgaccctgccttcggcaatcagttcatccaggttctccgcctcatagctgaggcggcgcttgacaacgacgcgccccctaccccgccttctgagcacgctgatccttccgatgacgatttcctccgtgtcgagctggacggttggggaaacgacg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="27167" stop="26118"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26867" g_stop="26418" g_length="450"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="450" r_length="450" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E284393" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>450</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E284393" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26867" e_stop="26418"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATATGGGTATTTAGAATAGCAAATGAAATAAGAGTACTTATTAGTCCTCTTTTCTGCTTTTTGTTCCCCTACCAAAAGTCTCCAACAATGGCCGAGGCCCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACG</genome_strand>
        <mrna_strand>GGATATGGGTATTTAGAATAGCAAATGAAATAAGAGTACTTATTAGTCCTCTTTTCTGCTTTTTGTTCCCCTACCAAAAGTCTCCAACAATGGCCGAGGCCCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCCTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTACCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E545341" ref_strand="+" ref_description="SGN-E545341 [TUS-68-C6]">
      <seq>cttccaattatccttcaatcataacaccaactccctctccttcattccaaaattatcactaacattaatggcttccacttcaatatctacaagatttttcttaatttgtgttgttattaattttttttctttatcactagccttacacatatcaccatcttcttcaatttcagctgcccctgcattgttaccaaatccacctgctctgtctcctgatataagtcctctttttccttcaccaggtggctctgagcttgctcctactgattcttcattacccttaattccttctacccctagccctcctaatcctgatgctatgattgctcctggacctctttatatgccgttttcgcctacgcagtctctaccggtgtcctctgctgttgctctgttttcatctttatgtacaatggtggtgttgagtttgatgtccacctggtttacgcagctccttcgtgtgtgaaggttcaatgatgtttggttgtgaggtatttttgatgaagtttcacactgatttgtttactatgttatgatttatttatgtactatactcttggtagtgtataatttgtttgttgtattacattttcattgtcaaataacaacgaaataagcacaatttttttttgtttagtttnnnanananaaannnnnnnnnnn</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="31834" stop="30595"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31534" g_stop="30872" g_length="663"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="663" r_length="663" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E545341" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>663</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E545341" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31534" e_stop="30872"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCCAATTATCCTTCAATCATAACACCAACTCCCTCTCCTTCATTCCAAAATTATCACTAACATTAATGGCTTCCACTTCAATATCTACAAGATTTTTCTTAATTTGTGTTGTTATTAATTTTTTTTCTTTATCACTAGCCTTACACATATCACCATCTTCTTCAATTTCAGCTGCCCCTGCATTGTTACCAAATCCACCTGCTCTGTCTCCTGATATAAGTCCTCTTTTTCCTTCACCAGGTGGCTCTGAGCTTGCTCCTACTGATTCTTCATTACCCTTAATTCCTTCTACCCCTAGCCCTCCTAATCCTGATGCTATGATTGCTCCTGGACCTCTTTATATGCCGTTTTCGCCTACGCAGTCTCTACCGGTGTCCTCTGCTGTTGCTCTGTTTTCATCTTTATGTACAATGGTGGTGTTGAGTTTGATGTCCACCTGGTTTACGCAGCTCCTTCGTGTGTGAAGGTTCAATGATGTTTGGTTGTGAGGTATTTTTGATGAAGTTTCACACTGATTTGTTTACTATGTTATGATTTATTTATGTACTATACTCTTGGTAGTGTATAATTTGTTTGTTGTATTACATTTTCATTGTCAAATAACAACGAAATAAGCACAATTTTTTTTTGTTTAGTTTATCTCAAGATCTGTATTTTGGTT</genome_strand>
        <mrna_strand>CTTCCAATTATCCTTCAATCATAACACCAACTCCCTCTCCTTCATTCCAAAATTATCACTAACATTAATGGCTTCCACTTCAATATCTACAAGATTTTTCTTAATTTGTGTTGTTATTAATTTTTTTTCTTTATCACTAGCCTTACACATATCACCATCTTCTTCAATTTCAGCTGCCCCTGCATTGTTACCAAATCCACCTGCTCTGTCTCCTGATATAAGTCCTCTTTTTCCTTCACCAGGTGGCTCTGAGCTTGCTCCTACTGATTCTTCATTACCCTTAATTCCTTCTACCCCTAGCCCTCCTAATCCTGATGCTATGATTGCTCCTGGACCTCTTTATATGCCGTTTTCGCCTACGCAGTCTCTACCGGTGTCCTCTGCTGTTGCTCTGTTTTCATCTTTATGTACAATGGTGGTGTTGAGTTTGATGTCCACCTGGTTTACGCAGCTCCTTCGTGTGTGAAGGTTCAATGATGTTTGGTTGTGAGGTATTTTTGATGAAGTTTCACACTGATTTGTTTACTATGTTATGATTTATTTATGTACTATACTCTTGGTAGTGTATAATTTGTTTGTTGTATTACATTTTCATTGTCAAATAACAACGAAATAAGCACAATTTTTTTTTGTTTAGTTTNNNANANANAAANNNNNNNNNNN</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E309833" ref_strand="+" ref_description="SGN-E309833 [cLEZ-10-E10]">
      <seq>ttccaattatccttcaatcataacaccaactccctctccttcattccaaaattatcactaacattaatggcttccacttcaatatctacaagatttttcttaatttgtgttgttattaattttttttctttatcactagccttacacatatcaccatcttcttcaatttcagctgcccctgcattgttaccaaatccacctgctctgtctcctgatataagtcctctttttccttcaccaggtggctctgagcttgctcctactgattcttcattacccttaattccttctacccctagccctcctaatcctgatgctatgattgctcctggacctctttatatgccgttttcgcctacgcagtctctaccggtgtcctctgctgttgctctgttttcatctttatgtacaatggtggtgttgagtttgatgtccacctggtttacgcagctccttcgtgtgtgaaggttcaatgatgtttggttgtgaggtatttttgatgaagtttcacactgatttgcttactatgttatgatttatttatgtactatactcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="31833" stop="30676"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31533" g_stop="30976" g_length="558"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="558" r_length="558" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E309833" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>558</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E309833" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31533" e_stop="30976"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCAATTATCCTTCAATCATAACACCAACTCCCTCTCCTTCATTCCAAAATTATCACTAACATTAATGGCTTCCACTTCAATATCTACAAGATTTTTCTTAATTTGTGTTGTTATTAATTTTTTTTCTTTATCACTAGCCTTACACATATCACCATCTTCTTCAATTTCAGCTGCCCCTGCATTGTTACCAAATCCACCTGCTCTGTCTCCTGATATAAGTCCTCTTTTTCCTTCACCAGGTGGCTCTGAGCTTGCTCCTACTGATTCTTCATTACCCTTAATTCCTTCTACCCCTAGCCCTCCTAATCCTGATGCTATGATTGCTCCTGGACCTCTTTATATGCCGTTTTCGCCTACGCAGTCTCTACCGGTGTCCTCTGCTGTTGCTCTGTTTTCATCTTTATGTACAATGGTGGTGTTGAGTTTGATGTCCACCTGGTTTACGCAGCTCCTTCGTGTGTGAAGGTTCAATGATGTTTGGTTGTGAGGTATTTTTGATGAAGTTTCACACTGATTTGTTTACTATGTTATGATTTATTTATGTACTATACTCTTG</genome_strand>
        <mrna_strand>TTCCAATTATCCTTCAATCATAACACCAACTCCCTCTCCTTCATTCCAAAATTATCACTAACATTAATGGCTTCCACTTCAATATCTACAAGATTTTTCTTAATTTGTGTTGTTATTAATTTTTTTTCTTTATCACTAGCCTTACACATATCACCATCTTCTTCAATTTCAGCTGCCCCTGCATTGTTACCAAATCCACCTGCTCTGTCTCCTGATATAAGTCCTCTTTTTCCTTCACCAGGTGGCTCTGAGCTTGCTCCTACTGATTCTTCATTACCCTTAATTCCTTCTACCCCTAGCCCTCCTAATCCTGATGCTATGATTGCTCCTGGACCTCTTTATATGCCGTTTTCGCCTACGCAGTCTCTACCGGTGTCCTCTGCTGTTGCTCTGTTTTCATCTTTATGTACAATGGTGGTGTTGAGTTTGATGTCCACCTGGTTTACGCAGCTCCTTCGTGTGTGAAGGTTCAATGATGTTTGGTTGTGAGGTATTTTTGATGAAGTTTCACACTGATTTGCTTACTATGTTATGATTTATTTATGTACTATACTCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E208613" ref_strand="+" ref_description="SGN-E208613 [cLEC-39-E19]">
      <seq>aagaatgatcctaattgtccttgtatttttatgaaaaggtcttggtaagacaaaattttgtcttgacctacagattgttaatttgacaaataaaatatttgtctaacagtgcacatacactgaaaaattttgatgcaattttatgtggatatatcgcattcattgagtaccccaatgattatgagatcacttgtcataaatgatgattcagtttgatctcaaaagaaggatgatgagtttcttggtgatgaaactctatcttggtgcaatcagggcactagtgcatcttgctaacaatactcgaccagatatctgttttgcagtaagtctactggcaagattcagttcctccccaacaaaaagacattggaatggcgttaaacacatacttcgatatcttcgagggaccatggacatgggtttattctattccaatgaatccaaatcagaactgattggttacgcagatgcagggtattta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="40821" stop="39742"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40521" g_stop="40042" g_length="480"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="481" r_length="481" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E208613" ref_strand="+">
        <total_alignment_score>0.904</total_alignment_score>
        <cumulative_length_of_scored_exons>480</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E208613" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40521" e_stop="40042"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAATGACCCTAATAGTCCTTGTATTTTTATGAAAAGGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAGATTGATAATTTGACAAATGAAATATTTGTCTAATAGTGCACATACACTGAAAAGTTTTGATGCAATTATATATGGATAAATCGCATTCATTGAGTACCCCAATGATTATGAGATCACTTGACATAAATGATGATTCAGTTTGATCTCAAAAGAAGGATGATGAGTTTCTTGGTGAAGAAACTCTATCTTGGTGCAATCAGGGCACTAGTGCATCTTACTAACAATATTTGACTAGATATTTGTTTTCCAGTAAATTTACTGGCAAGATTCAGTTTCTCCCCAATAAAAGGACATTGAAATGGTGTTGAACACATGATTGAATATCCTCGAAGGACCATAGTTAT-GGCTTATTCTATTCCAAGGAATCCAAGATAAAATTGATTGGTTATGCAGATGCAGAATATTTA</genome_strand>
        <mrna_strand>AAGAATGATCCTAATTGTCCTTGTATTTTTATGAAAAGGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAGATTGTTAATTTGACAAATAAAATATTTGTCTAACAGTGCACATACACTGAAAAATTTTGATGCAATTTTATGTGGATATATCGCATTCATTGAGTACCCCAATGATTATGAGATCACTTGTCATAAATGATGATTCAGTTTGATCTCAAAAGAAGGATGATGAGTTTCTTGGTGATGAAACTCTATCTTGGTGCAATCAGGGCACTAGTGCATCTTGCTAACAATACTCGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGCGTTAAACACATACTTCGATATCTTCGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATCCAAATCAGAACTGATTGGTTACGCAGATGCAGGGTATTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E289962" ref_strand="+" ref_description="SGN-E289962 [cLET-9-B10]">
      <seq>ttgaaagaaacttatccaataaagcttcaagaattcttatatggattgaaatagtcaaggaagaaaaatggtacaaaagaatgaccctaattgtccttgtatttttatgaaaaggtcttggtaagacaaaattttgccttgacctacagattgataatttgacaaatgaaatatttgtctaacagtgcacatacactgaaaaattttgatgcaattttatatgaataaatcgcattcattgagtaccccaatgattatgagattacttgacataaatgatgattcagtttgatctcaaaagaaggatgatgagtttcttggtgatgaaactctatcttggtgcaatcagggcactagtgcatcttactaacaatattattccagatatttgttttgcagtaaatttact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="40897" stop="39889"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40597" g_stop="40189" g_length="409"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="409" r_length="409" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E289962" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>409</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E289962" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40597" e_stop="40189"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAAAGAAACTTTTCCAATAAAGCTTCAAGAATCCTTATATGGATTGAAATTGTCAAGGAAGAAAAAGGGTACAAAAGAATGACCCTAATAGTCCTTGTATTTTTATGAAAAGGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAGATTGATAATTTGACAAATGAAATATTTGTCTAATAGTGCACATACACTGAAAAGTTTTGATGCAATTATATATGGATAAATCGCATTCATTGAGTACCCCAATGATTATGAGATCACTTGACATAAATGATGATTCAGTTTGATCTCAAAAGAAGGATGATGAGTTTCTTGGTGAAGAAACTCTATCTTGGTGCAATCAGGGCACTAGTGCATCTTACTAACAATATTTGACTAGATATTTGTTTTCCAGTAAATTTACT</genome_strand>
        <mrna_strand>TTGAAAGAAACTTATCCAATAAAGCTTCAAGAATTCTTATATGGATTGAAATAGTCAAGGAAGAAAAATGGTACAAAAGAATGACCCTAATTGTCCTTGTATTTTTATGAAAAGGTCTTGGTAAGACAAAATTTTGCCTTGACCTACAGATTGATAATTTGACAAATGAAATATTTGTCTAACAGTGCACATACACTGAAAAATTTTGATGCAATTTTATATGAATAAATCGCATTCATTGAGTACCCCAATGATTATGAGATTACTTGACATAAATGATGATTCAGTTTGATCTCAAAAGAAGGATGATGAGTTTCTTGGTGATGAAACTCTATCTTGGTGCAATCAGGGCACTAGTGCATCTTACTAACAATATTATTCCAGATATTTGTTTTGCAGTAAATTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E391540" ref_strand="+" ref_description="SGN-E391540 [TUS-16-I1]">
      <seq>acgaggatcttgaattcaaatctgtcatatagtgtggacagattaatggttgaccaagtaaaatgcacaattcaagtatattttgtttcacttagaaaagtgacattttggactggtagtccataaatcaaggtataatgtcagtggggtacaaataaattattatgcaataatataaccgtaagatatcaaatacggtttgtgtcttggggcataaaggtttatcgcaaaaatcctgacattattggagatgttttctcctttggtggatgcaatgaggtttgttttgatctggcaacatatgaaaagcttgaatgcatgtaatgaataattgtaatgtctagctagacaatgaaggttatatgaaaatccttgaaacaatcgaggtgtctgaagcatacaagagtttgaaagaaactttttcaataaagcttcaagaatccttatatggattgaaatagtcaaggaagaaaagggtacaaaagaatgatcctaattgtccttgtatttttatgaaaaggtcttggtaagacaaaattttgtcttgacctacagattgttaatttgacaaataaaatatttgtctaacagtgcacatacactgaaaaattttgatgcaattttatgtggatatatcgcattcattgagtaccccaatgattatgagatcacttgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="41303" stop="40027"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41003" g_stop="40327" g_length="677"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="677" r_length="677" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E391540" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>677</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E391540" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41003" e_stop="40327"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGAGGATCTTCAATTCAAATCTGTCATATAGTGTGGATAGATAAATGGTTGGCCAAGTAAAATGCATAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATAATTATGCGATAGTATAACCGTAATATATCAAATACGGTTTGTGCCTTGGGGCATAAAGATTTATCACAAAAATCCTGACATTATTGGAGATGTTTTCTCTTTTGGTGGATGCAATGAGGTTTGTTTTGATCTGGCGAAATATGAAAA-CTTGAATGCATGTAATGAATAATTGTAATGTCTAGTTAGACAATGAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAACATATAAGAGTTTGAAAGAAACTTTTCCAATAAAGCTTCAAGAATCCTTATATGGATTGAAATTGTCAAGGAAGAAAAAGGGTACAAAAGAATGACCCTAATAGTCCTTGTATTTTTATGAAAAGGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAGATTGATAATTTGACAAATGAAATATTTGTCTAATAGTGCACATACACTGAAAAGTTTTGATGCAATTATATATGGATAAATCGCATTCATTGAGTACCCCAATGATTATGAGATCACTTGAC</genome_strand>
        <mrna_strand>ACGAGGATCTTGAATTCAAATCTGTCATATAGTGTGGACAGATTAATGGTTGACCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATTATTATGCAATAATATAACCGTAAGATATCAAATACGGTTTGTGTCTTGGGGCATAAAGGTTTATCGCAAAAATCCTGACATTATTGGAGATGTTTTCTCCTTTGGTGGATGCAATGAGGTTTGTTTTGATCTGGCAACATATGAAAAGCTTGAATGCATGTAATGAATAATTGTAATGTCTAGCTAGACAATGAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAGCATACAAGAGTTTGAAAGAAACTTTTTCAATAAAGCTTCAAGAATCCTTATATGGATTGAAATAGTCAAGGAAG-AAAAGGGTACAAAAGAATGATCCTAATTGTCCTTGTATTTTTATGAAAAGGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAGATTGTTAATTTGACAAATAAAATATTTGTCTAACAGTGCACATACACTGAAAAATTTTGATGCAATTTTATGTGGATATATCGCATTCATTGAGTACCCCAATGATTATGAGATCACTTGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E267707" ref_strand="+" ref_description="SGN-E267707 [cLEI-12-K2]">
      <seq>ttgaccaagtaaaatgcacaattcaagtatattttgtttcacttagaaaagtgacattttggactggtagtccataaatcaaggtataatgtcagtggggtacaaataaattattatgcaataatataaccgtaagatatcaaatacggtttgtgtcttggggcataaaggtttatcgcaaaaatcctgacattattggagatgttttctcctttggtggatgcaatgaggtttgttttgatctggcaacatatgaaaagcttgaatgcatgtaatgaataattgtaatgtctagctagacaatgaaggttatatgaaaatccttgaaacaatcgaggtgtctgaagcatacaagagtttgaaagaaactttttcaataaagcttcaagaatccttatatggattgaaatagtcaaggaagaaaagggtacaaaagaatgatcctaattgtccttgtatttttatgaaaaggtcttggtaagacaaaattttgtcttgacctacagattgttaatttgacaaataaaatatttgtctaacagtgcacatacactgaaaaattttgatgcaattttatgtgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="41254" stop="40073"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40954" g_stop="40373" g_length="582"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="582" r_length="582" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E267707" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>582</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E267707" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40954" e_stop="40373"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGCCAAGTAAAATGCATAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATAATTATGCGATAGTATAACCGTAATATATCAAATACGGTTTGTGCCTTGGGGCATAAAGATTTATCACAAAAATCCTGACATTATTGGAGATGTTTTCTCTTTTGGTGGATGCAATGAGGTTTGTTTTGATCTGGCGAAATATGAAAA-CTTGAATGCATGTAATGAATAATTGTAATGTCTAGTTAGACAATGAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAACATATAAGAGTTTGAAAGAAACTTTTCCAATAAAGCTTCAAGAATCCTTATATGGATTGAAATTGTCAAGGAAGAAAAAGGGTACAAAAGAATGACCCTAATAGTCCTTGTATTTTTATGAAAAGGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAGATTGATAATTTGACAAATGAAATATTTGTCTAATAGTGCACATACACTGAAAAGTTTTGATGCAATTATATATGGA</genome_strand>
        <mrna_strand>TTGACCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATTATTATGCAATAATATAACCGTAAGATATCAAATACGGTTTGTGTCTTGGGGCATAAAGGTTTATCGCAAAAATCCTGACATTATTGGAGATGTTTTCTCCTTTGGTGGATGCAATGAGGTTTGTTTTGATCTGGCAACATATGAAAAGCTTGAATGCATGTAATGAATAATTGTAATGTCTAGCTAGACAATGAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAGCATACAAGAGTTTGAAAGAAACTTTTTCAATAAAGCTTCAAGAATCCTTATATGGATTGAAATAGTCAAGGAAG-AAAAGGGTACAAAAGAATGATCCTAATTGTCCTTGTATTTTTATGAAAAGGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAGATTGTTAATTTGACAAATAAAATATTTGTCTAACAGTGCACATACACTGAAAAATTTTGATGCAATTTTATGTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E205808" ref_strand="+" ref_description="SGN-E205808 [cLEC-20-M21]">
      <seq>cgaggatcttgaattcaaatctgtcatatagtgtggacagattaatggttgaccaagtaaaatgcacaattcaagtatattttgtttcacttagaaaagtgacattttggactggtagtccataaatcaaggtataatgtcagtggggtacaaataaattattatgcaataatataaccgtaagatatcaaatacggtttgtgtcttggggcataaaggtttatcgcaaaaatcctgacattattggagatgttttctcctttggtggatgcaatgaggtttgttttgatctggcaacatatgaaaagcttgaatgcatgtaatgaataattgtaatgtctagctagacaatgaaggttatatgaaaatccttgaaacaatcgaggtgtctgaagcatacaagagtttgaaagaaactttttcaataaagcttcaagaatccttatatggattgaaatagtcaaggaagaaaagggtacaaaagaatgatcctaattgtccttgtatttttatgaaaaggtcttggtaagacaaaattttgtcttgacctacag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="41302" stop="40149"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41002" g_stop="40449" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="554" r_length="554" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E205808" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E205808" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41002" e_stop="40449"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAGGATCTTCAATTCAAATCTGTCATATAGTGTGGATAGATAAATGGTTGGCCAAGTAAAATGCATAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATAATTATGCGATAGTATAACCGTAATATATCAAATACGGTTTGTGCCTTGGGGCATAAAGATTTATCACAAAAATCCTGACATTATTGGAGATGTTTTCTCTTTTGGTGGATGCAATGAGGTTTGTTTTGATCTGGCGAAATATGAAAA-CTTGAATGCATGTAATGAATAATTGTAATGTCTAGTTAGACAATGAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAACATATAAGAGTTTGAAAGAAACTTTTCCAATAAAGCTTCAAGAATCCTTATATGGATTGAAATTGTCAAGGAAGAAAAAGGGTACAAAAGAATGACCCTAATAGTCCTTGTATTTTTATGAAAAGGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAG</genome_strand>
        <mrna_strand>CGAGGATCTTGAATTCAAATCTGTCATATAGTGTGGACAGATTAATGGTTGACCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATTATTATGCAATAATATAACCGTAAGATATCAAATACGGTTTGTGTCTTGGGGCATAAAGGTTTATCGCAAAAATCCTGACATTATTGGAGATGTTTTCTCCTTTGGTGGATGCAATGAGGTTTGTTTTGATCTGGCAACATATGAAAAGCTTGAATGCATGTAATGAATAATTGTAATGTCTAGCTAGACAATGAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAGCATACAAGAGTTTGAAAGAAACTTTTTCAATAAAGCTTCAAGAATCCTTATATGGATTGAAATAGTCAAGGAAG-AAAAGGGTACAAAAGAATGATCCTAATTGTCCTTGTATTTTTATGAAAAGGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E202657" ref_strand="+" ref_description="SGN-E202657 [cLEC-19-H1]">
      <seq>gatcttgaattcaaatctgtcatatagtgtggacagattaatggttgaccaagtaaaatgcacaattcaagtatattttgtttcacttaaaaaagtgacattttggactggtagtccataaatcaaggtataatgtcagtggggtacaaataaattattatgcaataatataaccgtaagatatcaaatacgggttgcttcttggggcataaaggtttatcgcaaaaatcctgacattattggagatgttttctcctttggtggatgcaatgaggtttgatttgatctggcaacatatgaaaagcttgaatgcatgtaatgaataattgtaatgtctagctagacaatgaaggttatatgaaaatccttgaaacaatcgaggtgtctgaagcatacaagagtttgaaagaaactttttcaataaagcttcaagaatccttatatggattgaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="41298" stop="40246"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40998" g_stop="40546" g_length="453"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="454" r_length="454" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E202657" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>453</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E202657" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40998" e_stop="40546"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCTTCAATTCAAATCTGTCATATAGTGTGGATAGATAAATGGTTGGCCAAGTAAAATGCATAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATAATTATGCGATAGTATAACCGTAATATATCAAATACGGTTTGTGCCTTGGGGCATAAAGATTTATCACAAAAATCCTGACATTATTGGAGATGTTTTCTCTTTTGGTGGATGCAATGAGGTTTGTTTTGATCTGGCGAAATATGAAAA-CTTGAATGCATGTAATGAATAATTGTAATGTCTAGTTAGACAATGAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAACATATAAGAGTTTGAAAGAAACTTTTCCAATAAAGCTTCAAGAATCCTTATATGGATTGAAAT</genome_strand>
        <mrna_strand>GATCTTGAATTCAAATCTGTCATATAGTGTGGACAGATTAATGGTTGACCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAAAAAAGTGACATTTTGGACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATTATTATGCAATAATATAACCGTAAGATATCAAATACGGGTTGCTTCTTGGGGCATAAAGGTTTATCGCAAAAATCCTGACATTATTGGAGATGTTTTCTCCTTTGGTGGATGCAATGAGGTTTGATTTGATCTGGCAACATATGAAAAGCTTGAATGCATGTAATGAATAATTGTAATGTCTAGCTAGACAATGAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAGCATACAAGAGTTTGAAAGAAACTTTTTCAATAAAGCTTCAAGAATCCTTATATGGATTGAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E273497" ref_strand="+" ref_description="SGN-E273497 [cLEN-3-J16]">
      <seq>ttcagacacctggattgtttcaaggattttcatataaccttcattacaatttttcattacatgcattcaagtttttcatatgttgccagatcaaaacaaacctcattgcatccaccaaaggagaaaacatctccaataatgtcaggatttttgcgataaacctttatgccccaaggcacaaaccgtatttgatatcttacggttatactatcacataataatttatttgtaccccactgacattataccttgatttatggactaccagtccaaaatgtcacttttctaagtgaaacaaaatatacttgaattgtgcattttacttggctaaccatttatctgttcacactatatgacagatttgaattcaagatcctcatcacaatttatatcattgagcgctacctcatatcaaagataccgtcgacggttatttgatatcgattccaacaagacataacttatcgagatctcttcaatttttttcattatttcaggtacctgaacctttttcaagattttatgaagtgttatgtcaatgtgctcctttatagcacttgcctcattatcatgaccatattgatcatttgctccttccttctttaaggaattttatatttggaatcaattggtctattacgctttcggcgtatcataaactctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="+" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="40310" stop="41583"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40610" g_stop="41283" g_length="674"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="664" r_length="664" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="+" ref_id="SGN-E273497" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>674</cumulative_length_of_scored_exons>
        <coverage percentage="1.015" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E273497" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40610" e_stop="41283"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAGACACCTCGATTGTTTCAAGGATTTTCATATAACCTTCATTGTCTAACTAGACATTACAATTATTCATTACATGCATTCAAG-TTTTCATATTTCGCCAGATCAAAACAAACCTCATTGCATCCACCAAAAGAGAAAACATCTCCAATAATGTCAGGATTTTTGTGATAAATCTTTATGCCCCAAGGCACAAACCGTATTTGATATATTACGGTTATACTATCGCATAATTATTTATTTGTACCCCACTGACATTATACCTTGATTTATGGACTACCAGTCCAAAATGTCACTTTTCTAAGTGAAACAAAATATACTTGAATTATGCATTTTACTTGGCCAACCATTTATCTATCCACACTATATGACAGATTTGAATTGAAGATCCTCGTCACAATTTATATCATTGAGCGCTACC-CATATCAAAGATACCGTCGACGGTTATTTGATATCCATTTCAACAAGACATAACTTATCGAGATCTCTTC-A--TTTTTCATTATTTCAGGTACCTGAACCTTTTTCAAGATTTTATGAAGTGTTATGTCAATGTGCTCTTTTATAGCGCTTGCCTCATTATCATGACCATATTGATCATTTGCTCCTTCCTTCTTCAAGGAATTTCATATTTGGAATCGATTGGTCAATTACGCTTCCGGCGTATTATAAACTCTG</genome_strand>
        <mrna_strand>TTCAGACACCTGGATTGTTTCAAGGATTTTCATATAACCTTCA---T-T-AC---A-A-T----TT-TTCATTACATGCATTCAAGTTTTTCATATGTTGCCAGATCAAAACAAACCTCATTGCATCCACCAAAGGAGAAAACATCTCCAATAATGTCAGGATTTTTGCGATAAACCTTTATGCCCCAAGGCACAAACCGTATTTGATATCTTACGGTTATACTATCACATAATAATTTATTTGTACCCCACTGACATTATACCTTGATTTATGGACTACCAGTCCAAAATGTCACTTTTCTAAGTGAAACAAAATATACTTGAATTGTGCATTTTACTTGGCTAACCATTTATCTGTTCACACTATATGACAGATTTGAATTCAAGATCCTCATCACAATTTATATCATTGAGCGCTACCTCATATCAAAGATACCGTCGACGGTTATTTGATATCGATTCCAACAAGACATAACTTATCGAGATCTCTTCAATTTTTTTCATTATTTCAGGTACCTGAACCTTTTTCAAGATTTTATGAAGTGTTATGTCAATGTGCTCCTTTATAGCACTTGCCTCATTATCATGACCATATTGATCATTTGCTCCTTCCTTCTTTAAGGAATTTTATATTTGGAATCAATTGGTCTATTACGCTTTCGGCGTATCATAAACTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E273387" ref_strand="+" ref_description="SGN-E273387 [cLEN-3-J20]">
      <seq>ttcagacacctggattgtttcaaggattttcatataaccttcattacaatttttcattacatgcattcaagtttttcatatgttgccagatcaaaacaaacctcattgcatccaccaaaggagaaaacatctccaataatgtcaggatttttgcgataaacctttatgccccaaggcacaaaccgtatttgatatcttacggttatactatcacataataatttatttgtaccccactgacattataccttgatttatggactaccagtccaaaatgtcacttttctaagtgaaacaaaatatacttgaattgtgcattttacttggctaaccatttatctgttcacactatatgacagatttgaattcaagatcctcatcacaattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="+" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="40310" stop="41311"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40610" g_stop="41011" g_length="402"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="388" r_length="388" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="+" ref_id="SGN-E273387" ref_strand="+">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>402</cumulative_length_of_scored_exons>
        <coverage percentage="1.036" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E273387" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40610" e_stop="41011"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAGACACCTCGATTGTTTCAAGGATTTTCATATAACCTTCATTGTCTAACTAGACATTACAATTATTCATTACATGCATTCAAG-TTTTCATATTTCGCCAGATCAAAACAAACCTCATTGCATCCACCAAAAGAGAAAACATCTCCAATAATGTCAGGATTTTTGTGATAAATCTTTATGCCCCAAGGCACAAACCGTATTTGATATATTACGGTTATACTATCGCATAATTATTTATTTGTACCCCACTGACATTATACCTTGATTTATGGACTACCAGTCCAAAATGTCACTTTTCTAAGTGAAACAAAATATACTTGAATTATGCATTTTACTTGGCCAACCATTTATCTATCCACACTATATGACAGATTTGAATTGAAGATCCTCGTCACAATTT</genome_strand>
        <mrna_strand>TTCAGACACCTGGATTGTTTCAAGGATTTTCATATAACCTTCA---T-T-AC---A-A-T----TT-TTCATTACATGCATTCAAGTTTTTCATATGTTGCCAGATCAAAACAAACCTCATTGCATCCACCAAAGGAGAAAACATCTCCAATAATGTCAGGATTTTTGCGATAAACCTTTATGCCCCAAGGCACAAACCGTATTTGATATCTTACGGTTATACTATCACATAATAATTTATTTGTACCCCACTGACATTATACCTTGATTTATGGACTACCAGTCCAAAATGTCACTTTTCTAAGTGAAACAAAATATACTTGAATTGTGCATTTTACTTGGCTAACCATTTATCTGTTCACACTATATGACAGATTTGAATTCAAGATCCTCATCACAATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E338242" ref_strand="+" ref_description="SGN-E338242 [cTOE-13-M11]">
      <seq>taatattttctttcttttagaattttagtaagttcttttataacacgttatcagcacgagtctctagctaattgagagtgagttttagttttttctttaactcatgttttggttgatctcgatatgagaatcaaggtattatttgcataagatcaggtatgtattttctaaaatattttatgatttagaataaaatagtattcagtcactagcaattatcaggaaccgaagacatatactactattggttgaatatgacatgctatataaaacttattaaatggaagaaggtataaaattttaatagcatgagtttgaatgttattttgattgttttgaaagactcaaagggtgagtcgtgttgtacttcggtctattataccgttggtcaagggtaagacgattgattcaagtttcatcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="44300" stop="43315"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44000" g_stop="43615" g_length="386"/>
          <reference_exon_boundary r_type="cDNA" r_start="36" r_stop="421" r_length="386" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E338242" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>386</cumulative_length_of_scored_exons>
        <coverage percentage="0.917" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E338242" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44000" e_stop="43615"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTATAACACGTTATCAGCACGTGTCTCTAGCCAATTAAGATTGAGTTTTAG-TTTTTCTTTAACTCATGTTTTGGTTGATCTCGTTATGAGAATCAAGGTATTATATGCATAAATTAAGGTATGTATTTTCTAGAATATTTTTATGATTTAGAATAAAAATAGTATTCAGTCACTAACAATTATCACGAACCGAAGACATATACTATTATTGGTTGAATATTACATGCTATATAAAACTTCTTAAATTGAAGAA-GTGTAAAATTTTAATAGCATGAGTTTGAATGTTATTTTGATTATTTTGAAAGACTCAAAGGGTGAGTCATGTTGTACTTCGGTCTATTATACCGTTGGTTAAGGGTAAGACGATGGATTCAAGTTTCATCG</genome_strand>
        <mrna_strand>TTTTATAACACGTTATCAGCACGAGTCTCTAGCTAATTGAGAGTGAGTTTTAGTTTTTTCTTTAACTCATGTTTTGGTTGATCTCGATATGAGAATCAAGGTATTATTTGCATAAGATCAGGTATGTATTTTCTAAAATA-TTTTATGATTTAGAAT-AAAATAGTATTCAGTCACTAGCAATTATCAGGAACCGAAGACATATACTACTATTGGTTGAATATGACATGCTATATAAAACTTATTAAATGGAAGAAGGTATAAAATTTTAATAGCATGAGTTTGAATGTTATTTTGATTGTTTTGAAAGACTCAAAGGGTGAGTCGTGTTGTACTTCGGTCTATTATACCGTTGGTCAAGGGTAAGACGATTGATTCAAGTTTCATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E334585" ref_strand="+" ref_description="SGN-E334585 [cTOD-23-K17]">
      <seq>actcctgacgaatgctcattgtgttgaacatggtacccaggttaaagtgaagagaaggggagatgacactaaatatgttgccaaggttctagctagaggagtggagtgtgacatagccttgctatctgtggaaagcaaggacttctggaaaggagctgaacccctctgctttggacacttgcctcatctgcaggatgctgtaactgttgtaggttatccacttggaggagataccatttctgtgacaaaaggggtggtatcaagagtagaggtcacatcatatgctcatggatcatctgagcttctgggcattcaaatagatgcagcaataaatcctggtaatagtgggggccctgcattcaatgatgatggagagtgcataggagtggcatttcaggtttacaggtcagatgacgttgagaatattggttatgttatcccagccatggtagtgtctcattttctggaagactacgaaaggaacgggaagtacagtggttttccttgccttggggtattgttgcaaaaattggagaatccagcactacgtgcctgcttgagagttccttcgaatganggcgtactcgtacggaaaatcgagcctacttctgatgttagcaatgtcgtgaaagaaggcgacgtgattgttagctttgatggtgttcgtgtcgggtgtgaagggacagtgccatttcgatncagtgaacgcattgcgtttcgctatctcatcagtcaaagttcactggtgatgtagctgaacttggtattattagagctgggaattcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="67479" stop="55195"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67179" g_stop="67140" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="40" r_length="40" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="67139" i_stop="65823" i_length="1317">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65822" g_stop="65778" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="85" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65777" i_stop="63362" i_length="2416">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63361" g_stop="63254" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="193" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="63253" i_stop="62654" i_length="600">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.902" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62653" g_stop="62576" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="194" r_stop="271" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62575" i_stop="61735" i_length="841">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="61734" g_stop="61668" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="272" r_stop="338" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="61667" i_stop="61449" i_length="219">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="61448" g_stop="61390" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="339" r_stop="397" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="61389" i_stop="60923" i_length="467">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="60922" g_stop="60823" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="398" r_stop="497" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="60822" i_stop="58780" i_length="2043">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="58779" g_stop="58700" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="498" r_stop="577" r_length="80" r_score="0.988"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="58699" i_stop="57755" i_length="945">
            <donor d_prob="0.756" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="57754" g_stop="57698" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="578" r_stop="634" r_length="57" r_score="0.982"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="57697" i_stop="56048" i_length="1650">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="56047" g_stop="55944" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="635" r_stop="737" r_length="103" r_score="0.971"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="55943" i_stop="55546" i_length="398">
            <donor d_prob="0.994" d_score="0.94"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="55545" g_stop="55495" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="738" r_stop="787" r_length="50" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E334585" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>789</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E334585" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67179" e_stop="67140"/>
          <exon e_start="65822" e_stop="65778"/>
          <exon e_start="63361" e_stop="63254"/>
          <exon e_start="62653" e_stop="62576"/>
          <exon e_start="61734" e_stop="61668"/>
          <exon e_start="61448" e_stop="61390"/>
          <exon e_start="60922" e_stop="60823"/>
          <exon e_start="58779" e_stop="58700"/>
          <exon e_start="57754" e_stop="57698"/>
          <exon e_start="56047" e_stop="55944"/>
          <exon e_start="55545" e_stop="55495"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTCCTGACGAATGCTCATTGTGTTGAACATGGTACCCAGGTAAAGTCTCACCTTTGCTATGTAGACAATATTCCCATTAACTGGCTTCTATGTGCCTGTTTCTGTCTCCTCCTTTCTTCGTTAAATGGAAGAAAAGCTGAAGTTTTCTCAATCTGCTTTTATTAGAACAACAATTTTTTTATCATAATGGAAACTTATTCTCTAGAAAACTTTTTTCTTCATTATATAATACAACGCCCTTAAACTAAAGCAAATGGTGTCATGAGAATTGATTATTAGGACCGCTAAATCATAATATTTTTGCTTTCTGATTACCAAGAAATCCTAAAGGGCTAATGGCACAAGGTTTGGAATTCAGTGGATAACAGGCCAATCCTCTATCCTTCTCCAATTATATATATGCTAGACTTTCTTTTGTGGTAGGGTCATCATATGTGCTTTCCCCACTAGAACGGGGAACTTTTTTGGTCATTGTCAAATACCAGGCTTCCGTTATTCTGTTTTGTTATGTGAACCGTTCTTTTTCTAGGTCGAGAGCATGTCTATGTTATCCAGAACCATGGTCTTCTGATCTAGGCTTACTTTTAGATTGGTACTGGATTTTGGGGGAAAATGTTTGGCATTCACTTTTATTCTTCTTTTTGTAAAAAGTGAATCTATGAAGTATAACTTACTTTTTTTGGTTATATTTCTACAAATAAGTTGTTATAGAAGAGAAAAAGATTGGAAGATGTGGAAGAGAAGAAGTAATTTGCAATCTGTCTTATTTACTCTTTCGGCTTTGCATGGTGCCTTCCACAAAATATGAGATTGCACTTCTTTTCTAGGTTTTTGAACTTTATTGTAGTTTTTCATCCTAGGCAACGTTTTTTTTTTGGTCAAAAGCTGCTGTAAAGGATATCTAAATGCATGGAAACAGTATGTGGCAAAAATGAAAATTTAGGTGCACTTTTTCTCTCTAATTACATGATAGGGGTGTTGGGACTACTCATGCAAAAGGAACTAGACATAAAAGAAAGTTGAGGCATTTAACTAAGTCTAGAGAAATGTAAGATGGCTTTAAAGAAACTTAAACAGGTCACATTTGGGTTATCTAAACCAGAAAAATATATCCCACCTAATCCACATCACCACGTGAAAATCCGTCGTTTTGGATAATTTGGACAAATCGTCATCCATTTTCAAGCCCTACTTTTATTATTCAGTGTTCTCTAAATGACATCCAACTTGCTAGTCTTAAGTGGAGGAGACCTCTTGCAAGTTTTGAAAATTTTTTCTTGCCCGCACTTTATCAATTTTTTTAGTATATGTAAATTTAAAAATGCACTTTTAGCTGAAGTATCTTTTTGGTGGCAGGTTAAAGTGAAGAGAAGGGGAGATGACACTAAATATGTTGCCAAGGTAAGCTTTTCATGTTAACTTGTGAATGCCTATATTACCTGGTAATCTTCTTCTTTTTTAATTGGTAGAAGTATGAAAGATGCAAACTTGGTGTGGTAGAGAAAAAAAAAATACTCAGCTCAACCGTTTGCTGATCTAGAACCTAGACATTCTGTTTGGGGTCTGGTAAGAGGAAATGTGACCCAACCCAATTAACTCAATTAGGGTGTTCGTGGTTCGGTTTGGATCGGATATTGATTAAATCAAAACCAAACCAATTTAGTCAGTTTTTTAAATTTCTAAAACCAAACCAAACCAACCGAAAAAAATAACCATTGGTTTTGGTTATTGTCGGTTTGTTTCAGTTTTTCTGGTTTATTCGGTTTGAAAGTAACAATTTTTTTGAGGATGTACGTATCTCGATAGACACAAATACCAAGTACATGAACAATTTACAGAAAAACTAATGTCGGTTCAGGCAAGCAATTAAGCAATATTCGTGTTATCATTACAAGAACAAAGTGATTTATTTAAGATAAAGTGTGACTATTTTATGTGAAGTACAGTTAGTAAAGACTAAAATGGATTTTGATGGACTTAGATTTGAGATTGTTATACCTTGGCTAAAGTGTTAGGCTTGAAAAAAATGGTAAAGTTAAAGCCTTAAGTTAATTAAAATTTAACAAAATATTTTTAATTTATCTATGAATAATATATAAATAATTATAAAATTTATGTATCTAATTTATCGGTTCGGTTTGGTTATTTTTGCGGTTGTTTTTAGTAAAACCAAAACCAAACCAAATATTATCGGTTTTCAAAATTTAAAAATCAAACCTAACCAAACTAAACCAGATATCGGTTTTTTTTAATCGGTTTGGTTCGGATTGCAGTTTGGTTTGGTTGTTAACCATAACCATGAACAACCCTAAACCCGATTACCATAGGGCTCATTGGGTTAGTTTAGTTAATTGATAATGAACATTTCCCGTCTGTTGGAACATCAATTTGGAGCTCCCAGCTAATTTCTTCAAAATTGCATTTGGCATTATTATTTCATTTATAAGATGGAATTTTATGTTTATGGAAAGTAAGATGTTGCTAAAGAATAAAAACTTTCTATTTTCTCTTAAATTTGTGGAGCTTCAATTAAGCTCTTTGATCAAAAGAATCAATTTTTATCAATGCCTAGATGAAGTGGTGCAGTTCCAGATTTTGTATAGTTACAATGTGAGAAAATAAAGCATAGAATTTTTATCTCTAATTAACCATACTGGATGTAAAAATAGGTACCAAACGGGCTTTCTTTACTTTTTTCAATGTGGTTTAGTCACAAGCTAAAATTAGTTGTTTATTATTTGAGTGTAAACACGATGGTGTGGTGAAGTTGTCTGCGTTAAGACTGTGCCTCAGCTTTAGGTGCTAACTACTGCTTAGAAGTTTATGTTTCAACTAGGTCTTGTGCTATTATTTTTAAAAAAAGAACTACAGGCTTCTCGTTATCAGTGTGCCCATTCCTTATCCTCTGCATATTCAAAAATCCTCCTCCTCTGGGAGCTCCTGAATGTTTTTTCTATTTCGAACAATTGTAGATTAATTAAATAGGTCCCTCCTAGTTATCAAAAATAAAATAAATTCAATAGGTTATTTCTTTTGTAAGTATAACAATAAATTGAATTTGCAGTCTTGACAATCAGTATGTACTTTAAGACGATGCATTTACTGATGTATGCTAATTATTAGATTATATGGAACAAAAAGTTGGTATGAATATTCCATAACAAGACTCTTTAATGATGTTGAGAATTGTAAAGATATGGCACACCTGGACCAACTCAACCCCCAAAACTAGCTTATGAAGAAGGATTGCCCAAGTTCATATGAGTAAACCACCAGTCCATTCCCAATCAGTGTGGGACTTTGACCCATTCTAACACTCCCTTCATGCCCAGGCCCAACTGGAGCTTGGACCGAGAGCCTAGTCGAGAATGAACCTAACTCTGGTACCATATAAAAATATGACATCTGATCCTGACTCAACCCCAAAAGCTAGCTCATGAGGGGAAGATTTCCCAAGTCCATGTAAGTAGACCACTGCCCAAGTCCATATAAGTAGACCACCAGTCCATTTCCCAATCAATGTGGCACTTTGACCCTCTCTAACAAGAATCTCTAGGTGAGTCTAGGCAGATAATTGGAAAATTAGTTTCTATAGATGAAAAGTTGGATCTAACTTTATATAATGTAATCAGTTTTTGGTTCCAGGAGTAATCTTTAACAAGATTTCTTTTATGTTGTTGAAAACCGGAAGCTAAGTGAGAGATGACCACATTAGCCAGATCCATCAAGAAGATTAATGTTTTTAGATGGAAGTCGTGTCAGAAGTGCTAAAATGTCGTTGAGTTTTAGTGCTTGATTTCAACATCTATTGATGCAGGTTCTAGCTAGAGGAGTGGAGTGTGACATAGCCTTGCTATCTGTGGAAAGCAAGGACTTCTGGAAAGGAGCTGAACCCCTCTGCTTTGGACACTTGCCTCATCTGCAGGTTCGTCTCACATTCATCTGTACAGATCAGTTCTGGTGCCAAGCATGTATTTTTCAAGATATTCTTTGTCGTTTATGTTAATTTGTTAGATGCAACGTTTACCAATCAAACTTAATTTTGGAGAAATATATAATGGATTTGCCAATGTCCTATAATCAGTTTGAGATTTTTCCTAATATGAATGATTCTGTGTCTTATTATGCCAGCAGTTTTATATTATGTTAGGCTTCAATTGAAGATTTAGTAGTTGACACTTAGTTTTTCCTTGAATATAATTATTGGTAACAAGTAAGAATAGTAAATCTACATGAGAGAACTTGCTAAATTTTTAGGAATAGTTTCTGGCTCATAATGAGTGTAAAAACCACTTAGTGCCATAGTTGTGCGTGTGTATAAATGCCACTTAGTGCCATAGTTGTGTGTGTGTATAAATGTTATTTAAGTTTGCTGAACTACTATCTTCTTCTTAAATTGCTGTATTTAATTGAATCTTAGTTGAATTCTTGACTTCTTTTTTAGTACCCAAACTTAAATCTGTCCTGTTCTGTTGCAATCTATAGAGGTGTCATTCTTAAGCTGGAAGTTACTTCTGACTTGCAGGATGCTGTAACTGTTGTAGGTTATCCACTTGGAGGAGATACCATTTCTGTGACAAAAGGGGTGGTATCAAGAGTAGAGGTTTGTGTTTGTATTGTTTGGTTTTCAGTTTAGTGTTGCATAAATTTATCTGTAAAACAAGGCAGTGACTGAACCTTTTTATCTTCATTGAAAGTTTGTATTGCTCTACTCACTAGTGCTGGTCAGTTGTCATTTCTGGGTACACCATCTCGAAAGCATGTTATGATTGCTATTTCTCTTACCTCATCAATTTTGAAGAGTAATGGTCAGCTAGAGTTTGAAGAACTGTGAAATCTTTACTCTGGACTCTGGAGCCTCCATAGATAGTACACGGTTTTCACAAAATTTATTGTATGGTATAGAAGCAATAAAGTGACCTATGCTCAGCATTTGTTTGATGATGAGCCTTTTGTGAATACACAGTTACCTTTATCTCAAAAAATAAATAAAATAGAAGCAATAAAGAGATACCACATAAATTGTTCCATCTCCTTCCAAAACTTGAACATATACTTAAAGCAGTTCGTTGACCATAGATGAGGTTCCTCAGCAGTAACTAAAATGAGCAAAATCTTTTTATTTCATTACATAGTCAACGGGCAAAATGAGATTTCATCAATGGCCTTCTGCAATTTAGCTTGTTGATGGAAGCTAGGCACGCAGGCAAATTCATTCTTCTTTGTGATAAGTACTTTTTGTTCCATTTTATTTTTCTTTTATGTTTTATTGTTTTGTTTCTTATATTGCCCACTTTCTTATAAGTGCTAGCAGCTTCCTTGGAGTTGGTTCTGAGTTGATATGTATATATATAGAGGAAATTGTTTGAAAATAAGACAATCTTCCCTTTGACTGTTCTCGTAATTGTTGAATGCTTAACTCATATATTGGTGTTCATCATTAGGTCACATCATATGCTCATGGATCATCTGAGCTTCTGGGCATTCAAATAGATGCAGCAATAAATCCTGGTAAGAATGGACATTGATGATATGGCTAGTCCTATTAAGCACTAATCATCCCCCATTAATTTGCTCCTATTAATATAACTTGTTTATACCTTGTAAAAAAAATTAAGGAAAAAGAAATTCTTACTTGTTTAATAACTTCTTGCATGTGCTGTACGCGGATTACGGGGCTCTGCTTTCTTGCTTTACTGTAGTTTCTGCTACTAATAGCAACTGTTTTAGGTAATAGTGGGGGCCCTGCATTCAATGATGATGGAGAGTGCATAGGAGTGGCATTTCAGGTAGTTTCTTATCAGAATTTGATAATGCTCTTGTCATGTTAATAAAATTCTGGCTTCTTTTTGGATTTTACCATTTGGTCTGTAAAATATAATGTATTTATCAAAATTCGAGTGCATCTTTTGCTTTTCAAGTTTCAAATTGTTTATGTCTACTTAATTGCCTTAGTTCGTCATTCTACGCTACTGTTATAATCATTGGTTGTGAAAGGCAATTTTTTAAGCTAGCTCGAAATCTTGCGCTCATCATTAATACTCTTTTTTTTACTTCTTTGAATATTTTCGTGATACATGTTCGACTTTAGAAGTTCAAATTTTTCTTTTGCATTCCCTGTTGAAAAAGATTTTTATCATCGTGCTGCTTCTTCACAAACTGCTGTGTCTTCTCTGGATTCTATATTTTATATCAGGTTCTTTTGCAAGTTTGTGCTTTCTTTAGGGTATATGTTTTCACACGACGAGTCCTTTAGGTTTACAGGTCAGATGACGTTGAGAATATTGGTTATGTTATCCCAGCCATGGTAGTGTCTCATTTTCTGGAAGACTACGAAAGGAACGGGAAGTACAGTGGTGAGTCTCTCTCCTTTTTTTGGAAAAATGTCTTCTATGTTGGAAAATTATCTAAATGTCTAGGATTCTGCAAACATTTTTCCAATTGCTTTTTCAATTTGGTATACAAGAATTTTGATTTTCCAAAATGACACCTATTAACCACTGGGTGAGTAACAGGGAAAGAACTTTCAAGTCAAACCGCTTGGGTTTGAATCATGTGGTTAGTCTTTTACATGCGCCAACCTAAATATCTGAAATTCTATTGAAGTTTGGAAAGAAAACTGACCTATTCAGAACCTGCAAATGAAGACTTCAATTAAGGTTTTTAACTTACTTTTTGTTAAGAGTGTCCGACATTGAGGAAATGGGTTATTGTATCCTTAAGGTTTTGAGCAATCGTTGCCTATGAGTTAGCCTTTTGGGTTGAATTAGGCCCAAAGTCTATTTTCTTTACATTGTATCAAAGCCAGACCTACCCATATTCTTGGTTTACTCAATTGTTGGGCGTGTTAAATTGTTTACGCTCCTAATGTATAGCTGTAGGCATGGGGGAGGGGTATTAAAGTGTCCTACATTGAGAGAATGTGATGTTGTCAGCCTTTCAGAGGGTAGGTTGCAAATGAGGGACCTAAGCATTTCATTTCTGAGCCATGGACGTTTATCTTGATGCTTCTTGGTTCTGCAATATAAGCAAGGGTGGCTTTATGAGGGATTTTTGCTAAAGAATTTCAAAAGTCGGTTTTCCATGTGCCCCTTTCTATACAACACTATCACAATTAGTCCAAGAAAAGTGTTTTCATCTTTACTAAGATGTTTTATTTCTTAAATATTTATAATAAAAATGATTTTGATTCATAATTCCTTTTTAAGTATTTCAGTTCTGACCATGGATGGACGTTTATCTAGACTAGAAGCAAGCTCTGATGCTTCTTGGTTCTACAAGATAAGCAAGGGTGGGTTTATGAGGGTTCTTTTGCTAATAGATTTGAAAAGTCGGTACTCCATGTGCCCATTCTATACAACACTATCACATTTAGAGCAAGCAAAGAGTTTTATCTTTTACTAAGACGTTTTATTTTCTTAGATATTTATAATCATAAATGATTTTGATTCATAATTCCTTTCTATGTAGTTTCTTAGTATTTAACTTTTCATCTTTAAAGATAGAAGAGTTGTGTCTGAATGCACACCGATAATAAATGATTTGACCCTCTTTCTCCAAATGCCTTCGTTATTTTCGATAAGATAAAGGGCCTCAACTGAGATTCAATTTCTGAGAGAGAAGGGGTGGGAGGGCAGGAGGCGAGCTGGGCCATTATTTTTCCTCAATGCCTTATTACAAAAGATGACTTCGTTTATTATGATTTATGTTTGCTGCTCTTAAATCTTAATTATTAAGCACAAAAGTAAATCTTTCTACTATGTAGTGGTTTGTGACCCTTCAAAACAATATAGAAACTAGTGCTAATTTATTCTTGCTTGTTCTTATGGTTCCTGCCAACTGCATGGCTGTAATAATTATGTAAAACATAGGCTGAAGTTTTAACCTGTAACTTTCAAACTTTTATTTGGTAAATTGTTTTACTAGTTATTAATTTGTTGATTTTTTTTTATAGTTGACTGCAAACCATCTATTCATTTTCTTAAAAAAATTAAAAAACCATACACAATTCATTTATGTGGTGCCTATTTTTGTTCTTCATTATTTTGGAGTATATTCATTTATAAACGACATTATTGCATAGTGAATTTTGCATTTAGTTGTTTTTGGAAGTCTAAAGATTATCTGCCAGCCAAATATCTAGTTAACGAAAAAAAAAAAATAGAAGAAATAATCATCACTTGAGCCAATTTTACAGAATTGCCATAACAACCCCCTCGCCCTCGCGAAGCTTCTTTTGTTTCTTCTTTCTTTTGCTTAAGCTGCGGCACAGTACAATTGTTTATCTAATTTGTTAGTCTCTTCCTTATGCTTTAAAGAACTACCAGTGCATCATATGATTTGGAAGCTTATTTGCTTGTAGGTTTTCAATAGCTTATCTAACAGTATTGTGATTTCAGGTTTTCCTTGCCTTGGGGTATTGTTGCAAAAATTGGAGAATCCAGCACTACGTGCCTGCTTGAGAGTTCCTTCGAATGAGGTCTGGATTTGTACCTAGATATATAAAGAAGTCCACATTAGTTGCATAAGCTTTTTATAACATATGTCTTTCTTTCTGGAGTTCCTTATCCTTTTCTCGGTAATTTTCTTTTGTGGAGGTAGGGGAAGAGAGGGAGGGTGGGAGGGACATATTTTTGAAGCAAACAAGACCATTTTTCTTCTATATTTAGCTGTTCGTTTGATCTTGTTTCCGAGTAGAACTCTATAATTCCTCAATCAACTTTGTTAATACTAGAGTGGAAATGGTTTCTGCAGCAACATGAATTGTGTGAGAGTGGAGGAAGGATCCAATGGTTAAGTTCCTACAAAGAGATAGGAAGGGGGTTGTCGTGGCTAGAATTCAGTAAATCTTTGCTTAAGGCCTTATATATGATAGAAAAAAGTGTATAATTGAATAAAACATTCATCTTCAGTTACACAGCCAGTAGCAAAGTAATTTAAAGAAAATAGAATAAGTGTCATTAGGCTGTTAATTTGGGAAAATTTATTTCATGGTAGGGATTGAGCTGAGCAAATATAGCTCTTCTTGATGATGAATCCTCTGGGCTCCAGCCAACATCTTTCTACACATAACTGAGCTTTCTTGAATGGAAAGATTGGAAATATCCTGTTTGAGTAACGTCAATAATATCCTCTTCTGCGACGTCTCCAGATCTCTTGAAGGATCGTTGTGTCTACTCCTTCAAATTGGTCAATCATGACAGTAGTTGATTTAATAACCTGTCAACTGAATCCATATCAGATTTTCTAATTTACGCCTCATCTGAAAGAAAACCTAGTTTGCATTGTCAACTGAAGATACCTTGGCTGATCATGTGTTTGAGAGTGTCAAATATAAATTATGTTGATAAATTTGTGTGGAGAGGGTTAATCACTAATCTCTAGACGCCCTTGTTTAATACATGCTGTGTAATTGGTTTTGCAGGGCGTACTCGTACGGAAAATCGAGCCTACTTCTGATGTTAGCAATGTCGTGAAAGAGGTACCGTCCATATATTACTGTTCACGAGTCTTTTCTAACTTTCTAAATATTTTGCTTTATGTGTGATTCTGCTCTTAAAGACATTTCAGTGTACTATTTCATTCTGTTATTACTTATTAATGTCCTCAGAACTTATAACCATTAATGGATGGAAGGACCACGAGTAGAAATGATGTTTGAATGAAAAGGGAGAGATTGATGTGTACCTTAGAAACGTAACATTGAGTTGTTTTTCATGAGAAGCTTGTTGAAAGTCATTGCTTAAAATAGAAGTCTATCATTTTTGGCATAAAACTGTAGTATGATAGTTTCTAGGTTGTTTTACTGCTTTTCATTCATGTCTGTCAATTAAATTAATGTATTACTCCCTCCGTCCCATTTTATGTGTGGTAGTTTGACTCAGCATTGACTTTAAGAAAGAAAATTTGACTTTTAAAACTTGTGGTCCAAAATACAAAATGAATGATAGAAATTTGTGTGGCTGAAAATCATTTCATTAAGGGTAAAATAGACATATTGATGGAATTTTACTTTTGGTGTTTATGGACAAAGAGGAACAAAAAATGTTTTGATGAAATTTCAACTTCTAGAGATCTTTTGCGAGGCAGATGTCTAGTTAGCCTTTTTAGTTGGTCCAAACTTACCCCTGGAAATAATTTAAAACTCTTTTGGATTTTGTTAGCTCTATAGCTAAGAAAGAGGCTACAAACCTTTCTTTTTTGTAAGCTTAACTGATCTATCCTTGTAAAGCTTGCATTTTCTTGATGCATTGAAATGAATCTACTTACTTAATCAAAAAAAATAAAAAATTAAAGGTAAAATAGACATTTTATAGTTAAACTGTTACTTAATATATAAATGTGTCATTCTATTCTTTTTGGGACTGACTAACAAAGAAAGTAAATCACATAAATTAGGACAGAGGGAGTAACCCTTAAGTGCTTGTACTGATTTTCTTACCGTAATTGGATTTTCTGTTTTCTTGGAGGAAGGATAAAACATTTACCATAATTGGTTTTTATATTGCCTAAAAGAAAATATTATTTTTTCATATTTGGCTAATCCTTTTCTTGAAGAAAAAGGTTTAGCACTAAGTAAATTAATGATCCTTCCTTCTCCCTTTACAACATCCACAGTATAGTCCTTACGAAAGTTATGGATTAGGGCTCCAGTCGTACCATTTGTATTATGTCATTCAACATTGATAAACATGCGCTTGGATGTAATTTCTGCTATTCATAAGTAAGCTCTCATTTAAAAGTGAAGATGGATTTCACGAGAATGTTGCATATAAATATCCTTTTGGAGTTTGGGGAGCATGGTGCACTATAGGTGTGTTTCTACAACTCATAAGTGATCTCCTCATGGGAAAGCGAAGATCACGCTATGAGAACGCGAGATTAGACAGGAGTATCCTTTCTGAGTTGTGGGATCATGTTACAAATGGATATAGGTATTGTCCCAGGACCAGCTTAATAACTTGTAGATGAAGAGTATAGTGTATATTTGACCATTTTAGTTAGTACTTAGTCCTACCTACTTCACATCTGTGTGTACCTGTCTCTTTGGAAGGTTTCGTTTTTCTATTATCATTAGGACGGTATTTTGGTATTGTCACATAGTTTAACAATACCTTGTTCATCTTTTCAGGGCGACGTGATTGTTAGCTTTGATGGTGTTCGTGTCGGGTGTGAAGGGACAGTGCCATTTCGATCAAGTGAACGCATTGCGTTTCGCTATCTCATCAGTCAAAAGTAAAACTTAATTACTTCTTAGATTTGTATTTAAGCACAATTCTATGTTGACAAAAATTATTCACTTCATTTCAGTTTGAATGGCTAACTTTGGAACTGCTTGTTAAGTGGTAATACCAATTTGTAAGACACTGCCTTGATGTTGCTCTGCTTTTTGCATCATTTGATTTTTCCTTGGCTAGTGGGATCATTGTCATTGTCTATACAATCAGGGTTAAATTGGAACATCCTTGCTCTTATTCTATTTCTCGGTGACCTTGAACTGTATATTGGTCAATGCACATAATCCACTGAATCCTTAGCATAATTTGAGTTTCCTCATGCTCCTTGCACATACCTCTTTGTAAAGTTTGCTCCTATACCTGTTTGTATGTTAACAAGGGCCTTGTCCTCTTCAGGTTCACTGGTGATGTAGCTGAACTTGGTATTATTAGAGCTGGGGAATTCCT</genome_strand>
        <mrna_strand>ACTCCTGACGAATGCTCATTGTGTTGAACATGGTACCCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAAGTGAAGAGAAGGGGAGATGACACTAAATATGTTGCCAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTAGCTAGAGGAGTGGAGTGTGACATAGCCTTGCTATCTGTGGAAAGCAAGGACTTCTGGAAAGGAGCTGAACCCCTCTGCTTTGGACACTTGCCTCATCTGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCTGTAACTGTTGTAGGTTATCCACTTGGAGGAGATACCATTTCTGTGACAAAAGGGGTGGTATCAAGAGTAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCACATCATATGCTCATGGATCATCTGAGCTTCTGGGCATTCAAATAGATGCAGCAATAAATCCTG...........................................................................................................................................................................................................................GTAATAGTGGGGGCCCTGCATTCAATGATGATGGAGAGTGCATAGGAGTGGCATTTCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTACAGGTCAGATGACGTTGAGAATATTGGTTATGTTATCCCAGCCATGGTAGTGTCTCATTTTCTGGAAGACTACGAAAGGAACGGGAAGTACAGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTCCTTGCCTTGGGGTATTGTTGCAAAAATTGGAGAATCCAGCACTACGTGCCTGCTTGAGAGTTCCTTCGAATGAN.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGTACTCGTACGGAAAATCGAGCCTACTTCTGATGTTAGCAATGTCGTGAAAGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGACGTGATTGTTAGCTTTGATGGTGTTCGTGTCGGGTGTGAAGGGACAGTGCCATTTCGATNCAGTGAACGCATTGCGTTTCGCTATCTCATCAGTC-AAA..............................................................................................................................................................................................................................................................................................................................................................................................................GTTCACTGGTGATGTAGCTGAACTTGGTATTATTAGAGCT-GGGAATTCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E730807" ref_strand="+" ref_description="SGN-E730807 [LA25BA11]">
      <seq>gataaatatttctaattagatttctctgaaaactacatctaactgaagaagaagaagccaacatgctgagattagcttcaaggggcggcatcaaatccaggggcctacttcaaactttcaataaagacttctccactcacattgagagaaaacttgaaggcaaggtggcgctgatcaccggagcagcaagtggaatcggaaaagaaaccgccgcgaaattcatcaacaacggtgccaaagttgtaatagcagatgtacaaaatcaggtcggccaagaaactgcctcggagctggggccaaacgcctcttttgtggtctgcgatgtcacaaaagaatccgacgtctccaatgcagtggatttcaccatctccagccacggaaaactcgacattatgtacaacaatgcaggtataccatgttgtactccacgttccatagctgatcttgacctcgatgcatttgatagagtcatggctatcaacgtccgtggggtgatagcagggattaaacacgcagctcgagtgatgatcccacgtaaaaccggttccatattgtgcacagctagtgtcacaggggtgataggaggtctagcgcaacctacatattcgacaaccaaatcctgtgtgatcggaatcatgagatcagttacagcagaactaagtcagaacggaatcagaatcaattgtgtatcgccctttgcaattccaactccgttctatatggatgagataaaattgcatttcccgaaattggaacctgaagttcttgttnaaatgttgcatcgcactagtgaaattgaaggagcctactgtgagccaattgatggggctaatgctgctctgtttttagctagtgatgatgccaagtat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="76322" stop="73165"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76022" g_stop="75941" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="82" r_length="82" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75940" i_stop="75465" i_length="476">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75464" g_stop="75399" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="83" r_stop="148" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75398" i_stop="74269" i_length="1130">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.799" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="74268" g_stop="74009" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="149" r_stop="408" r_length="260" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="74008" i_stop="73926" i_length="83">
            <donor d_prob="0.232" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="73925" g_stop="73465" g_length="461"/>
          <reference_exon_boundary r_type="cDNA" r_start="409" r_stop="869" r_length="461" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E730807" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>869</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E730807" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76022" e_stop="75941"/>
          <exon e_start="75464" e_stop="75399"/>
          <exon e_start="74268" e_stop="74009"/>
          <exon e_start="73925" e_stop="73465"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAAATATTTCTAATTAGATTTCTCTGAAAACTACATCTAACTGAAGAAGAAGAAGCCAACATGCTGAGATTAGCTTCAAGGTTAGTTTTCTCTCATCAATCCTTCAAAAAAAAAAAAAACACACAGAAAAGTTAAATTCATAATAAGTATAATCTTATATATTACAATTTGAATAACATAATTTAATAGCATACGAATCATCTAATTAAACTTTTAGATATCTGCCTATATATCAGCTAGACAAACAATAGAATAATATAGATATTGAAATTTTAGCTATAATATATGGTGTGTATATATATATATATATATAAAATCAATAATTCAGTTCTTTCTCAATCCACCTCTAGTTTGAAATTTGAATACAACTAGTTAGATGTGGGGGAAAAAATATTTCAATTGGTGATAATCAAATTTAATAGGCATTTAATCATAAACAATTTCAAGTATCATGATGTATTCATTTTTGTTTTTATTTTCTCTCATATTCTGCACCTTATCTTTACATCTCATTTTTTTTTTGTTTTCTTGTATTTAATTTTGAACCAATTAACAGGGGCGGCATCAAATCCAGGGGCCTACTTCAAACTTTCAATAAAGACTTCTCCACTCACATTGAGAGGTGTGTTTTCTCTTTCCGCTCCGTTTTATGTAACACAATTTAAATTATAAGTGTTAAATTATTTTATTTATAATGTAAAATTTTGAAATGATCTAGCTAGTCAACATGATTGCTGATCGTTGCATCTTTTCTTATGTTTTGCTCTTTGATAAAAATATGAATTGACTTTATTAGAAAGTGATTTTTTTTATTTTTGACGTACATATTATAGTTTGATTAAATTTAAATTTTATGTCGAAAAATCTTATAATTAAGATTAAAATACTCCCTATTAGAAAGAGAAGTAATAATACATCAAACTTGGCTATTTCAAAGTAAAATTTATATATTTTGAAATAATATAAAGATTGTTACATATATAAATAAAATTTAAAATATAAAGGATTTTAATTATTTTTTCTTTGATGTTTTTAATAATAATCGTAACACATTTTGAGAGTGAAGTATTATTCTTAAATGTCATATGACCGTAAAAAATGACAAGATCTTTTTGTGCTGCTCGAGCACATGTATAACATTTTATTTATTCGCATATAGTACATTGCATGTTAGGTATCATAATTTGAGTGGTAAAAGACAAGGAAAACCATGTATTTTTTTTTATCATATACTTTAGGAATATAAAGTTTATAGCTTTCCATTTTCAATTAAGATGCACATAACTTTTCATAAATAACCTTCTTATTTCAACTATTATCACTTTATATAAATACATTTTTCGATACTTACCCATATCATTACACATGCTTTAATTTTAGGAAATACACTTATATCATTATTAGAATCGAGTAATGTTTGAAATTAGTTTGGCGGACTTGTTAGTAGCTGTGATAATTTGTACATTGCAATCTAAAATTTCAAAATCCGGGATGAAAGCGTTGCGTATTTAGTAGCAATTTTTTTAGTTGGCCTTGGATTCAAGCCTCGAAATAAGAAAAAGTCTTGCTTGAAAGTGTTTTTTTCTTTTTAATCGATCTTCGTATCTCAAAATCAAATTATCCAATATTGATATCAAAATTGAACTAATATCTTTTGGATGGACCAAAATTTTGGGCCTAAATCCTTCCTTGCCGGTCCTGAGTATTCTGAATACAAAAGTTTGAAAATAAGTTTATTTTGTAAAATGCAAGAAAACTTGAAGGCAAGGTGGCGCTGATCACCGGAGCAGCAAGTGGAATCGGAAAAGAAACCGCCGCGAAATTCATCAACAACGGTGCCAAAGTTGTAATAGCAGATGTACAAAATCAGGTCGGCCAAGAAACTGCCTCGGAGCTGGGGCCAAACGCCTCTTTTGTGGTCTGCGATGTCACAAAAGAATCCGACGTCTCCAATGCAGTGGATTTCACCATCTCCAGCCACGGAAAACTCGACATTATGTACAACAATGCAGGTATTCAGAGGCCGAAGTCAACATACAGAGTAACTCATACTATTCTTGTCTCGAATATTCAATTGAATTTTAAAATTTTGTAGGTATACCATGTTGTACTCCACGTTCCATAGCTGATCTTGACCTCGATGCATTTGATAGAGTCATGGCTATCAACGTCCGTGGGGTGATAGCAGGGATTAAACACGCAGCTCGAGTGATGATCCCACGTAAAACCGGTTCCATATTGTGCACAGCTAGTGTCACAGGGGTGATAGGAGGTCTAGCGCAACCTACATATTCGACAACCAAATCCTGTGTGATCGGAATCATGAGATCAGTTACAGCAGAACTAAGTCAGAACGGAATCAGAATCAATTGTGTATCGCCCTTTGCAATTCCAACTCCGTTCTATATGGATGAGATAAAATTGCATTTCCCGAAATTGGAACCTGAAGTTCTTGTTAAAATGTTGCATCGCACTAGTGAATTGAAAGGAGCCTACTGTGAGCCAATTGATGTGGCTAATGCTGCTCTGTTTTTAGCTAGTGATGATGCCAAGTAT</genome_strand>
        <mrna_strand>GATAAATATTTCTAATTAGATTTCTCTGAAAACTACATCTAACTGAAGAAGAAGAAGCCAACATGCTGAGATTAGCTTCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCGGCATCAAATCCAGGGGCCTACTTCAAACTTTCAATAAAGACTTCTCCACTCACATTGAGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTTGAAGGCAAGGTGGCGCTGATCACCGGAGCAGCAAGTGGAATCGGAAAAGAAACCGCCGCGAAATTCATCAACAACGGTGCCAAAGTTGTAATAGCAGATGTACAAAATCAGGTCGGCCAAGAAACTGCCTCGGAGCTGGGGCCAAACGCCTCTTTTGTGGTCTGCGATGTCACAAAAGAATCCGACGTCTCCAATGCAGTGGATTTCACCATCTCCAGCCACGGAAAACTCGACATTATGTACAACAATGCAG...................................................................................GTATACCATGTTGTACTCCACGTTCCATAGCTGATCTTGACCTCGATGCATTTGATAGAGTCATGGCTATCAACGTCCGTGGGGTGATAGCAGGGATTAAACACGCAGCTCGAGTGATGATCCCACGTAAAACCGGTTCCATATTGTGCACAGCTAGTGTCACAGGGGTGATAGGAGGTCTAGCGCAACCTACATATTCGACAACCAAATCCTGTGTGATCGGAATCATGAGATCAGTTACAGCAGAACTAAGTCAGAACGGAATCAGAATCAATTGTGTATCGCCCTTTGCAATTCCAACTCCGTTCTATATGGATGAGATAAAATTGCATTTCCCGAAATTGGAACCTGAAGTTCTTGTTNAAATGTTGCATCGCACTAGTGAAATTGAAGGAGCCTACTGTGAGCCAATTGATGGGGCTAATGCTGCTCTGTTTTTAGCTAGTGATGATGCCAAGTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E546541" ref_strand="+" ref_description="SGN-E546541 [TUS-69-P9]">
      <seq>gaataaacatgctgagattagcttcaaggggtggcatcaaatcaagggccctgcttcaaactttcaataaagacttctccactcacgttgagagaaaacttgaaggcaaggtggcgctgatcaccggagcagcaagtggaatcggaaaagaaaccgccgcgaaattcatcaacaatggtgccaaagttgtaatagcagatgtacaaaatcaggttggccaagaaactgcctccgagctcgggccaaacgcctcttttgtggtttgcgatgtcacaaaagaatccgacgtctccaatgcagtggatttcaccatctccagccacggaaaactcgacattatgtacaacaatgcaggtataccatgttgtactccacggaccatagctgatcttgacctcgatgcatttgatcgagtcatggctatcaacgtccgtggggtgatagcagggattaaacacgcagctcgagtgatgatcccacgtaaaaccggttccatattgtgcacagctagcgtcacaggggtgataggaggtctagcgcagcctacatattcgacaaccaaatcctgtgtgatcggaatcatgagatcagttacagcagaactaagtcagaacggaatcagaatcaactgtgtatcgccctttgcattccaactccgttctatatggatgagataaaattgcatttcccgaaattggaacctgaaagtcttgnnntaaatgtgcatcgcactagtgaattgaaaggagcctactgtgagccaattgatgtggctaatgctgctctgtttttagcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="76263" stop="73182"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75969" g_stop="75941" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="28" r_length="28" r_score="0.897"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75940" i_stop="75465" i_length="476">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75464" g_stop="75399" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="94" r_length="66" r_score="0.924"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75398" i_stop="74269" i_length="1130">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.799" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="74268" g_stop="74009" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="354" r_length="260" r_score="0.981"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="74008" i_stop="73926" i_length="83">
            <donor d_prob="0.232" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="73925" g_stop="73482" g_length="444"/>
          <reference_exon_boundary r_type="cDNA" r_start="355" r_stop="797" r_length="443" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E546541" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>799</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E546541" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75969" e_stop="75941"/>
          <exon e_start="75464" e_stop="75399"/>
          <exon e_start="74268" e_stop="74009"/>
          <exon e_start="73925" e_stop="73482"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGCCAACATGCTGAGATTAGCTTCAAGGTTAGTTTTCTCTCATCAATCCTTCAAAAAAAAAAAAAACACACAGAAAAGTTAAATTCATAATAAGTATAATCTTATATATTACAATTTGAATAACATAATTTAATAGCATACGAATCATCTAATTAAACTTTTAGATATCTGCCTATATATCAGCTAGACAAACAATAGAATAATATAGATATTGAAATTTTAGCTATAATATATGGTGTGTATATATATATATATATATAAAATCAATAATTCAGTTCTTTCTCAATCCACCTCTAGTTTGAAATTTGAATACAACTAGTTAGATGTGGGGGAAAAAATATTTCAATTGGTGATAATCAAATTTAATAGGCATTTAATCATAAACAATTTCAAGTATCATGATGTATTCATTTTTGTTTTTATTTTCTCTCATATTCTGCACCTTATCTTTACATCTCATTTTTTTTTTGTTTTCTTGTATTTAATTTTGAACCAATTAACAGGGGCGGCATCAAATCCAGGGGCCTACTTCAAACTTTCAATAAAGACTTCTCCACTCACATTGAGAGGTGTGTTTTCTCTTTCCGCTCCGTTTTATGTAACACAATTTAAATTATAAGTGTTAAATTATTTTATTTATAATGTAAAATTTTGAAATGATCTAGCTAGTCAACATGATTGCTGATCGTTGCATCTTTTCTTATGTTTTGCTCTTTGATAAAAATATGAATTGACTTTATTAGAAAGTGATTTTTTTTATTTTTGACGTACATATTATAGTTTGATTAAATTTAAATTTTATGTCGAAAAATCTTATAATTAAGATTAAAATACTCCCTATTAGAAAGAGAAGTAATAATACATCAAACTTGGCTATTTCAAAGTAAAATTTATATATTTTGAAATAATATAAAGATTGTTACATATATAAATAAAATTTAAAATATAAAGGATTTTAATTATTTTTTCTTTGATGTTTTTAATAATAATCGTAACACATTTTGAGAGTGAAGTATTATTCTTAAATGTCATATGACCGTAAAAAATGACAAGATCTTTTTGTGCTGCTCGAGCACATGTATAACATTTTATTTATTCGCATATAGTACATTGCATGTTAGGTATCATAATTTGAGTGGTAAAAGACAAGGAAAACCATGTATTTTTTTTTATCATATACTTTAGGAATATAAAGTTTATAGCTTTCCATTTTCAATTAAGATGCACATAACTTTTCATAAATAACCTTCTTATTTCAACTATTATCACTTTATATAAATACATTTTTCGATACTTACCCATATCATTACACATGCTTTAATTTTAGGAAATACACTTATATCATTATTAGAATCGAGTAATGTTTGAAATTAGTTTGGCGGACTTGTTAGTAGCTGTGATAATTTGTACATTGCAATCTAAAATTTCAAAATCCGGGATGAAAGCGTTGCGTATTTAGTAGCAATTTTTTTAGTTGGCCTTGGATTCAAGCCTCGAAATAAGAAAAAGTCTTGCTTGAAAGTGTTTTTTTCTTTTTAATCGATCTTCGTATCTCAAAATCAAATTATCCAATATTGATATCAAAATTGAACTAATATCTTTTGGATGGACCAAAATTTTGGGCCTAAATCCTTCCTTGCCGGTCCTGAGTATTCTGAATACAAAAGTTTGAAAATAAGTTTATTTTGTAAAATGCAAGAAAACTTGAAGGCAAGGTGGCGCTGATCACCGGAGCAGCAAGTGGAATCGGAAAAGAAACCGCCGCGAAATTCATCAACAACGGTGCCAAAGTTGTAATAGCAGATGTACAAAATCAGGTCGGCCAAGAAACTGCCTCGGAGCTGGGGCCAAACGCCTCTTTTGTGGTCTGCGATGTCACAAAAGAATCCGACGTCTCCAATGCAGTGGATTTCACCATCTCCAGCCACGGAAAACTCGACATTATGTACAACAATGCAGGTATTCAGAGGCCGAAGTCAACATACAGAGTAACTCATACTATTCTTGTCTCGAATATTCAATTGAATTTTAAAATTTTGTAGGTATACCATGTTGTACTCCACGTTCCATAGCTGATCTTGACCTCGATGCATTTGATAGAGTCATGGCTATCAACGTCCGTGGGGTGATAGCAGGGATTAAACACGCAGCTCGAGTGATGATCCCACGTAAAACCGGTTCCATATTGTGCACAGCTAGTGTCACAGGGGTGATAGGAGGTCTAGCGCAACCTACATATTCGACAACCAAATCCTGTGTGATCGGAATCATGAGATCAGTTACAGCAGAACTAAGTCAGAACGGAATCAGAATCAATTGTGTATCGCCCTTTGCAATTCCAACTCCGTTCTATATGGATGAGATAAAATTGCATTTCCCGAAATTGGAACCTGAAGTTCTTGTTAAAATGTTGCATCGCACTAGTGAATTGAAAGGAGCCTACTGTGAGCCAATTGATGTGGCTAATGCTGCTCTGTTTTTAGCTA</genome_strand>
        <mrna_strand>GAA-TAAACATGCTGAGATTAGCTTCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTGGCATCAAATCAAGGGCCCTGCTTCAAACTTTCAATAAAGACTTCTCCACTCACGTTGAGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTTGAAGGCAAGGTGGCGCTGATCACCGGAGCAGCAAGTGGAATCGGAAAAGAAACCGCCGCGAAATTCATCAACAATGGTGCCAAAGTTGTAATAGCAGATGTACAAAATCAGGTTGGCCAAGAAACTGCCTCCGAGCTCGGGCCAAACGCCTCTTTTGTGGTTTGCGATGTCACAAAAGAATCCGACGTCTCCAATGCAGTGGATTTCACCATCTCCAGCCACGGAAAACTCGACATTATGTACAACAATGCAG...................................................................................GTATACCATGTTGTACTCCACGGACCATAGCTGATCTTGACCTCGATGCATTTGATCGAGTCATGGCTATCAACGTCCGTGGGGTGATAGCAGGGATTAAACACGCAGCTCGAGTGATGATCCCACGTAAAACCGGTTCCATATTGTGCACAGCTAGCGTCACAGGGGTGATAGGAGGTCTAGCGCAGCCTACATATTCGACAACCAAATCCTGTGTGATCGGAATCATGAGATCAGTTACAGCAGAACTAAGTCAGAACGGAATCAGAATCAACTGTGTATCGCCCTTTGC-ATTCCAACTCCGTTCTATATGGATGAGATAAAATTGCATTTCCCGAAATTGGAACCTGAAAGTCTTGNNNTAAATGTGCATCGCACTAGTGAATTGAAAGGAGCCTACTGTGAGCCAATTGATGTGGCTAATGCTGCTCTGTTTTTAGCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E317217" ref_strand="+" ref_description="SGN-E317217 [cTOA-28-E16]">
      <seq>aaatatttctaattagatttctctgaaaactacatctaactgaagaagaagaagccaacatgctgagattagcttcaaggggcggcatcaaatccaggggcctacttcaaactttcaataaagacttctccactcacattgagagaaaacttgaaggcaaggtggcgctgatcaccggagcagcaagtggaatcggaaaagaaaccgccgcgaaattcatcaacaacggtgccaaagttgtaatagcagatgtacaaaatcaggtcggccaagaaactgcctcggagctggggccaaacgcctcttttgtggtctgcgatgtcacaaaagaatccgacgtctccaatgcagtggatttcaccatctccagccacggaaaactcgacattatgtacaacaatgcaggtataccatgttgtactccacgttccatagctgatcttgacctcgatgcatttgatagagtcatggctatcaacgtccgtggggtgatagcagggattaaacacgcagctcgagtgatgatcccacgtaaaaccggttccatattgtgcacagctagtgtcacaggggtgataggaggtctagcgcaacctacatattcgacaaccaaatcctgtgtgatcggaatcatgagatcagttacagcagaactaagtcagaacggaatcagaatcaattgtgtatcgccctttgcaattcaactccgttctatatggatgagataaattgcatttcccgaattggaacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="76319" stop="73276"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76019" g_stop="75941" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75940" i_stop="75465" i_length="476">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75464" g_stop="75399" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="145" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75398" i_stop="74269" i_length="1130">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.799" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="74268" g_stop="74009" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="146" r_stop="405" r_length="260" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="74008" i_stop="73926" i_length="83">
            <donor d_prob="0.232" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="73925" g_stop="73576" g_length="350"/>
          <reference_exon_boundary r_type="cDNA" r_start="406" r_stop="752" r_length="347" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E317217" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>755</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E317217" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76019" e_stop="75941"/>
          <exon e_start="75464" e_stop="75399"/>
          <exon e_start="74268" e_stop="74009"/>
          <exon e_start="73925" e_stop="73576"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATATTTCTAATTAGATTTCTCTGAAAACTACATCTAACTGAAGAAGAAGAAGCCAACATGCTGAGATTAGCTTCAAGGTTAGTTTTCTCTCATCAATCCTTCAAAAAAAAAAAAAACACACAGAAAAGTTAAATTCATAATAAGTATAATCTTATATATTACAATTTGAATAACATAATTTAATAGCATACGAATCATCTAATTAAACTTTTAGATATCTGCCTATATATCAGCTAGACAAACAATAGAATAATATAGATATTGAAATTTTAGCTATAATATATGGTGTGTATATATATATATATATATAAAATCAATAATTCAGTTCTTTCTCAATCCACCTCTAGTTTGAAATTTGAATACAACTAGTTAGATGTGGGGGAAAAAATATTTCAATTGGTGATAATCAAATTTAATAGGCATTTAATCATAAACAATTTCAAGTATCATGATGTATTCATTTTTGTTTTTATTTTCTCTCATATTCTGCACCTTATCTTTACATCTCATTTTTTTTTTGTTTTCTTGTATTTAATTTTGAACCAATTAACAGGGGCGGCATCAAATCCAGGGGCCTACTTCAAACTTTCAATAAAGACTTCTCCACTCACATTGAGAGGTGTGTTTTCTCTTTCCGCTCCGTTTTATGTAACACAATTTAAATTATAAGTGTTAAATTATTTTATTTATAATGTAAAATTTTGAAATGATCTAGCTAGTCAACATGATTGCTGATCGTTGCATCTTTTCTTATGTTTTGCTCTTTGATAAAAATATGAATTGACTTTATTAGAAAGTGATTTTTTTTATTTTTGACGTACATATTATAGTTTGATTAAATTTAAATTTTATGTCGAAAAATCTTATAATTAAGATTAAAATACTCCCTATTAGAAAGAGAAGTAATAATACATCAAACTTGGCTATTTCAAAGTAAAATTTATATATTTTGAAATAATATAAAGATTGTTACATATATAAATAAAATTTAAAATATAAAGGATTTTAATTATTTTTTCTTTGATGTTTTTAATAATAATCGTAACACATTTTGAGAGTGAAGTATTATTCTTAAATGTCATATGACCGTAAAAAATGACAAGATCTTTTTGTGCTGCTCGAGCACATGTATAACATTTTATTTATTCGCATATAGTACATTGCATGTTAGGTATCATAATTTGAGTGGTAAAAGACAAGGAAAACCATGTATTTTTTTTTATCATATACTTTAGGAATATAAAGTTTATAGCTTTCCATTTTCAATTAAGATGCACATAACTTTTCATAAATAACCTTCTTATTTCAACTATTATCACTTTATATAAATACATTTTTCGATACTTACCCATATCATTACACATGCTTTAATTTTAGGAAATACACTTATATCATTATTAGAATCGAGTAATGTTTGAAATTAGTTTGGCGGACTTGTTAGTAGCTGTGATAATTTGTACATTGCAATCTAAAATTTCAAAATCCGGGATGAAAGCGTTGCGTATTTAGTAGCAATTTTTTTAGTTGGCCTTGGATTCAAGCCTCGAAATAAGAAAAAGTCTTGCTTGAAAGTGTTTTTTTCTTTTTAATCGATCTTCGTATCTCAAAATCAAATTATCCAATATTGATATCAAAATTGAACTAATATCTTTTGGATGGACCAAAATTTTGGGCCTAAATCCTTCCTTGCCGGTCCTGAGTATTCTGAATACAAAAGTTTGAAAATAAGTTTATTTTGTAAAATGCAAGAAAACTTGAAGGCAAGGTGGCGCTGATCACCGGAGCAGCAAGTGGAATCGGAAAAGAAACCGCCGCGAAATTCATCAACAACGGTGCCAAAGTTGTAATAGCAGATGTACAAAATCAGGTCGGCCAAGAAACTGCCTCGGAGCTGGGGCCAAACGCCTCTTTTGTGGTCTGCGATGTCACAAAAGAATCCGACGTCTCCAATGCAGTGGATTTCACCATCTCCAGCCACGGAAAACTCGACATTATGTACAACAATGCAGGTATTCAGAGGCCGAAGTCAACATACAGAGTAACTCATACTATTCTTGTCTCGAATATTCAATTGAATTTTAAAATTTTGTAGGTATACCATGTTGTACTCCACGTTCCATAGCTGATCTTGACCTCGATGCATTTGATAGAGTCATGGCTATCAACGTCCGTGGGGTGATAGCAGGGATTAAACACGCAGCTCGAGTGATGATCCCACGTAAAACCGGTTCCATATTGTGCACAGCTAGTGTCACAGGGGTGATAGGAGGTCTAGCGCAACCTACATATTCGACAACCAAATCCTGTGTGATCGGAATCATGAGATCAGTTACAGCAGAACTAAGTCAGAACGGAATCAGAATCAATTGTGTATCGCCCTTTGCAATTCCAACTCCGTTCTATATGGATGAGATAAAATTGCATTTCCCGAAATTGGAACCT</genome_strand>
        <mrna_strand>AAATATTTCTAATTAGATTTCTCTGAAAACTACATCTAACTGAAGAAGAAGAAGCCAACATGCTGAGATTAGCTTCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCGGCATCAAATCCAGGGGCCTACTTCAAACTTTCAATAAAGACTTCTCCACTCACATTGAGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTTGAAGGCAAGGTGGCGCTGATCACCGGAGCAGCAAGTGGAATCGGAAAAGAAACCGCCGCGAAATTCATCAACAACGGTGCCAAAGTTGTAATAGCAGATGTACAAAATCAGGTCGGCCAAGAAACTGCCTCGGAGCTGGGGCCAAACGCCTCTTTTGTGGTCTGCGATGTCACAAAAGAATCCGACGTCTCCAATGCAGTGGATTTCACCATCTCCAGCCACGGAAAACTCGACATTATGTACAACAATGCAG...................................................................................GTATACCATGTTGTACTCCACGTTCCATAGCTGATCTTGACCTCGATGCATTTGATAGAGTCATGGCTATCAACGTCCGTGGGGTGATAGCAGGGATTAAACACGCAGCTCGAGTGATGATCCCACGTAAAACCGGTTCCATATTGTGCACAGCTAGTGTCACAGGGGTGATAGGAGGTCTAGCGCAACCTACATATTCGACAACCAAATCCTGTGTGATCGGAATCATGAGATCAGTTACAGCAGAACTAAGTCAGAACGGAATCAGAATCAATTGTGTATCGCCCTTTGCAATT-CAACTCCGTTCTATATGGATGAGAT-AAATTGCATTTCCCG-AATTGGAACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E359431" ref_strand="+" ref_description="SGN-E359431 [cLHT-31-G6]">
      <seq>aataaacatgctgagattagcttcaaggggtggcatcaaatcaagggccctgcttcaaactttcaataaagacttctccactcacgttgagagaaaacttgaaggcaaggtggcgctgatcaccggagcagcaagtggaatcggaaaagaaaccgccgcgaaattcatcaacaatggtgccaaagttgtaatagcagatgtacaaaatcaggttggccaagaaactgcctccgagctcgggccaaacgcctcttttgtggtttgcgatgtcacaaaagaatccgacgtctccaatgcagtggatttcaccatctccagccacggaaaactcgacattatgtacaacaatgcaggtataccatgttgtactccacggaccatagctgatcttgacctcgatgcatttgatcgagtcatggctatcaacgtccgtggggtgatagcagggattaaacacgcagctcgagtgatgatcccacgtaaaaccggttccatattgtgcacagctagcgtcacaggggtgataggaggtctagcgcagcctacatattcgacaaccaaatcctgtgtgatcggaatcatgagatcagttacagcagaactaagtcagaacggaatcagaatcaactgtgtatcgccctttgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="76263" stop="73333"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75967" g_stop="75941" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="27" r_length="27" r_score="0.889"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75940" i_stop="75465" i_length="476">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75464" g_stop="75399" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="93" r_length="66" r_score="0.924"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75398" i_stop="74269" i_length="1130">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.799" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="74268" g_stop="74009" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="94" r_stop="353" r_length="260" r_score="0.981"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="74008" i_stop="73926" i_length="83">
            <donor d_prob="0.232" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="73925" g_stop="73633" g_length="293"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="646" r_length="293" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E359431" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>646</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E359431" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75967" e_stop="75941"/>
          <exon e_start="75464" e_stop="75399"/>
          <exon e_start="74268" e_stop="74009"/>
          <exon e_start="73925" e_stop="73633"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCCAACATGCTGAGATTAGCTTCAAGGTTAGTTTTCTCTCATCAATCCTTCAAAAAAAAAAAAAACACACAGAAAAGTTAAATTCATAATAAGTATAATCTTATATATTACAATTTGAATAACATAATTTAATAGCATACGAATCATCTAATTAAACTTTTAGATATCTGCCTATATATCAGCTAGACAAACAATAGAATAATATAGATATTGAAATTTTAGCTATAATATATGGTGTGTATATATATATATATATATAAAATCAATAATTCAGTTCTTTCTCAATCCACCTCTAGTTTGAAATTTGAATACAACTAGTTAGATGTGGGGGAAAAAATATTTCAATTGGTGATAATCAAATTTAATAGGCATTTAATCATAAACAATTTCAAGTATCATGATGTATTCATTTTTGTTTTTATTTTCTCTCATATTCTGCACCTTATCTTTACATCTCATTTTTTTTTTGTTTTCTTGTATTTAATTTTGAACCAATTAACAGGGGCGGCATCAAATCCAGGGGCCTACTTCAAACTTTCAATAAAGACTTCTCCACTCACATTGAGAGGTGTGTTTTCTCTTTCCGCTCCGTTTTATGTAACACAATTTAAATTATAAGTGTTAAATTATTTTATTTATAATGTAAAATTTTGAAATGATCTAGCTAGTCAACATGATTGCTGATCGTTGCATCTTTTCTTATGTTTTGCTCTTTGATAAAAATATGAATTGACTTTATTAGAAAGTGATTTTTTTTATTTTTGACGTACATATTATAGTTTGATTAAATTTAAATTTTATGTCGAAAAATCTTATAATTAAGATTAAAATACTCCCTATTAGAAAGAGAAGTAATAATACATCAAACTTGGCTATTTCAAAGTAAAATTTATATATTTTGAAATAATATAAAGATTGTTACATATATAAATAAAATTTAAAATATAAAGGATTTTAATTATTTTTTCTTTGATGTTTTTAATAATAATCGTAACACATTTTGAGAGTGAAGTATTATTCTTAAATGTCATATGACCGTAAAAAATGACAAGATCTTTTTGTGCTGCTCGAGCACATGTATAACATTTTATTTATTCGCATATAGTACATTGCATGTTAGGTATCATAATTTGAGTGGTAAAAGACAAGGAAAACCATGTATTTTTTTTTATCATATACTTTAGGAATATAAAGTTTATAGCTTTCCATTTTCAATTAAGATGCACATAACTTTTCATAAATAACCTTCTTATTTCAACTATTATCACTTTATATAAATACATTTTTCGATACTTACCCATATCATTACACATGCTTTAATTTTAGGAAATACACTTATATCATTATTAGAATCGAGTAATGTTTGAAATTAGTTTGGCGGACTTGTTAGTAGCTGTGATAATTTGTACATTGCAATCTAAAATTTCAAAATCCGGGATGAAAGCGTTGCGTATTTAGTAGCAATTTTTTTAGTTGGCCTTGGATTCAAGCCTCGAAATAAGAAAAAGTCTTGCTTGAAAGTGTTTTTTTCTTTTTAATCGATCTTCGTATCTCAAAATCAAATTATCCAATATTGATATCAAAATTGAACTAATATCTTTTGGATGGACCAAAATTTTGGGCCTAAATCCTTCCTTGCCGGTCCTGAGTATTCTGAATACAAAAGTTTGAAAATAAGTTTATTTTGTAAAATGCAAGAAAACTTGAAGGCAAGGTGGCGCTGATCACCGGAGCAGCAAGTGGAATCGGAAAAGAAACCGCCGCGAAATTCATCAACAACGGTGCCAAAGTTGTAATAGCAGATGTACAAAATCAGGTCGGCCAAGAAACTGCCTCGGAGCTGGGGCCAAACGCCTCTTTTGTGGTCTGCGATGTCACAAAAGAATCCGACGTCTCCAATGCAGTGGATTTCACCATCTCCAGCCACGGAAAACTCGACATTATGTACAACAATGCAGGTATTCAGAGGCCGAAGTCAACATACAGAGTAACTCATACTATTCTTGTCTCGAATATTCAATTGAATTTTAAAATTTTGTAGGTATACCATGTTGTACTCCACGTTCCATAGCTGATCTTGACCTCGATGCATTTGATAGAGTCATGGCTATCAACGTCCGTGGGGTGATAGCAGGGATTAAACACGCAGCTCGAGTGATGATCCCACGTAAAACCGGTTCCATATTGTGCACAGCTAGTGTCACAGGGGTGATAGGAGGTCTAGCGCAACCTACATATTCGACAACCAAATCCTGTGTGATCGGAATCATGAGATCAGTTACAGCAGAACTAAGTCAGAACGGAATCAGAATCAATTGTGTATCGCCCTTTGCA</genome_strand>
        <mrna_strand>AATAAACATGCTGAGATTAGCTTCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTGGCATCAAATCAAGGGCCCTGCTTCAAACTTTCAATAAAGACTTCTCCACTCACGTTGAGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTTGAAGGCAAGGTGGCGCTGATCACCGGAGCAGCAAGTGGAATCGGAAAAGAAACCGCCGCGAAATTCATCAACAATGGTGCCAAAGTTGTAATAGCAGATGTACAAAATCAGGTTGGCCAAGAAACTGCCTCCGAGCTCGGGCCAAACGCCTCTTTTGTGGTTTGCGATGTCACAAAAGAATCCGACGTCTCCAATGCAGTGGATTTCACCATCTCCAGCCACGGAAAACTCGACATTATGTACAACAATGCAG...................................................................................GTATACCATGTTGTACTCCACGGACCATAGCTGATCTTGACCTCGATGCATTTGATCGAGTCATGGCTATCAACGTCCGTGGGGTGATAGCAGGGATTAAACACGCAGCTCGAGTGATGATCCCACGTAAAACCGGTTCCATATTGTGCACAGCTAGCGTCACAGGGGTGATAGGAGGTCTAGCGCAGCCTACATATTCGACAACCAAATCCTGTGTGATCGGAATCATGAGATCAGTTACAGCAGAACTAAGTCAGAACGGAATCAGAATCAACTGTGTATCGCCCTTTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E322393" ref_strand="+" ref_description="SGN-E322393 [cTOB-24-F6]">
      <seq>aaatatttctaattagatttctctgaaaactacatctaactgaagaagaagaagccaacatngctgagattagcttcaaggggcggcatcaaatccaggggcctacttcaaactttcaataaagacttctccactcacattgagagaaaacttgaaggcaaggtggcgctgatcaccggagcagcaagtggaatcggaaaagaaaccgccgcgaaattcatcaacaacggtgccaaagttgtaatagcagatgtacaaaatcaggtcggccaagaaactgcctcggagctggggccaaacgcctcttttgtggtctgcgatgtcacaaaagaatccgacgtctccaatgcagtggatttcaccatctccagccacggaaaactcgacattatgtacaacaatgcaggtataccatgttgtactccacgttccatagctgatcttgacctcgatgcatttgatagagtcatggctatcaacgtccgtggggtgatagcagggattaaacacgcagctcgagtgatgatcccacngtaaaccggttccatattgtgcacagctagtgtcacaggggtgataggaggtctagcgcaacctacatattcgacaaccaaatcctgtgtgatcggaatcatgagatcagttacagcagaactaagtcagaacggaatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="-" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="76319" stop="73360"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76019" g_stop="75941" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="80" r_length="80" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75940" i_stop="75465" i_length="476">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75464" g_stop="75399" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="81" r_stop="146" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75398" i_stop="74269" i_length="1130">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.799" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="74268" g_stop="74009" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="147" r_stop="406" r_length="260" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="74008" i_stop="73926" i_length="83">
            <donor d_prob="0.232" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="73925" g_stop="73660" g_length="266"/>
          <reference_exon_boundary r_type="cDNA" r_start="407" r_stop="672" r_length="266" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="-" ref_id="SGN-E322393" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>671</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E322393" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76019" e_stop="75941"/>
          <exon e_start="75464" e_stop="75399"/>
          <exon e_start="74268" e_stop="74009"/>
          <exon e_start="73925" e_stop="73660"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATATTTCTAATTAGATTTCTCTGAAAACTACATCTAACTGAAGAAGAAGAAGCCAACAT-GCTGAGATTAGCTTCAAGGTTAGTTTTCTCTCATCAATCCTTCAAAAAAAAAAAAAACACACAGAAAAGTTAAATTCATAATAAGTATAATCTTATATATTACAATTTGAATAACATAATTTAATAGCATACGAATCATCTAATTAAACTTTTAGATATCTGCCTATATATCAGCTAGACAAACAATAGAATAATATAGATATTGAAATTTTAGCTATAATATATGGTGTGTATATATATATATATATATAAAATCAATAATTCAGTTCTTTCTCAATCCACCTCTAGTTTGAAATTTGAATACAACTAGTTAGATGTGGGGGAAAAAATATTTCAATTGGTGATAATCAAATTTAATAGGCATTTAATCATAAACAATTTCAAGTATCATGATGTATTCATTTTTGTTTTTATTTTCTCTCATATTCTGCACCTTATCTTTACATCTCATTTTTTTTTTGTTTTCTTGTATTTAATTTTGAACCAATTAACAGGGGCGGCATCAAATCCAGGGGCCTACTTCAAACTTTCAATAAAGACTTCTCCACTCACATTGAGAGGTGTGTTTTCTCTTTCCGCTCCGTTTTATGTAACACAATTTAAATTATAAGTGTTAAATTATTTTATTTATAATGTAAAATTTTGAAATGATCTAGCTAGTCAACATGATTGCTGATCGTTGCATCTTTTCTTATGTTTTGCTCTTTGATAAAAATATGAATTGACTTTATTAGAAAGTGATTTTTTTTATTTTTGACGTACATATTATAGTTTGATTAAATTTAAATTTTATGTCGAAAAATCTTATAATTAAGATTAAAATACTCCCTATTAGAAAGAGAAGTAATAATACATCAAACTTGGCTATTTCAAAGTAAAATTTATATATTTTGAAATAATATAAAGATTGTTACATATATAAATAAAATTTAAAATATAAAGGATTTTAATTATTTTTTCTTTGATGTTTTTAATAATAATCGTAACACATTTTGAGAGTGAAGTATTATTCTTAAATGTCATATGACCGTAAAAAATGACAAGATCTTTTTGTGCTGCTCGAGCACATGTATAACATTTTATTTATTCGCATATAGTACATTGCATGTTAGGTATCATAATTTGAGTGGTAAAAGACAAGGAAAACCATGTATTTTTTTTTATCATATACTTTAGGAATATAAAGTTTATAGCTTTCCATTTTCAATTAAGATGCACATAACTTTTCATAAATAACCTTCTTATTTCAACTATTATCACTTTATATAAATACATTTTTCGATACTTACCCATATCATTACACATGCTTTAATTTTAGGAAATACACTTATATCATTATTAGAATCGAGTAATGTTTGAAATTAGTTTGGCGGACTTGTTAGTAGCTGTGATAATTTGTACATTGCAATCTAAAATTTCAAAATCCGGGATGAAAGCGTTGCGTATTTAGTAGCAATTTTTTTAGTTGGCCTTGGATTCAAGCCTCGAAATAAGAAAAAGTCTTGCTTGAAAGTGTTTTTTTCTTTTTAATCGATCTTCGTATCTCAAAATCAAATTATCCAATATTGATATCAAAATTGAACTAATATCTTTTGGATGGACCAAAATTTTGGGCCTAAATCCTTCCTTGCCGGTCCTGAGTATTCTGAATACAAAAGTTTGAAAATAAGTTTATTTTGTAAAATGCAAGAAAACTTGAAGGCAAGGTGGCGCTGATCACCGGAGCAGCAAGTGGAATCGGAAAAGAAACCGCCGCGAAATTCATCAACAACGGTGCCAAAGTTGTAATAGCAGATGTACAAAATCAGGTCGGCCAAGAAACTGCCTCGGAGCTGGGGCCAAACGCCTCTTTTGTGGTCTGCGATGTCACAAAAGAATCCGACGTCTCCAATGCAGTGGATTTCACCATCTCCAGCCACGGAAAACTCGACATTATGTACAACAATGCAGGTATTCAGAGGCCGAAGTCAACATACAGAGTAACTCATACTATTCTTGTCTCGAATATTCAATTGAATTTTAAAATTTTGTAGGTATACCATGTTGTACTCCACGTTCCATAGCTGATCTTGACCTCGATGCATTTGATAGAGTCATGGCTATCAACGTCCGTGGGGTGATAGCAGGGATTAAACACGCAGCTCGAGTGATGATCCCACGTAAAACCGGTTCCATATTGTGCACAGCTAGTGTCACAGGGGTGATAGGAGGTCTAGCGCAACCTACATATTCGACAACCAAATCCTGTGTGATCGGAATCATGAGATCAGTTACAGCAGAACTAAGTCAGAACGGAATC</genome_strand>
        <mrna_strand>AAATATTTCTAATTAGATTTCTCTGAAAACTACATCTAACTGAAGAAGAAGAAGCCAACATNGCTGAGATTAGCTTCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCGGCATCAAATCCAGGGGCCTACTTCAAACTTTCAATAAAGACTTCTCCACTCACATTGAGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTTGAAGGCAAGGTGGCGCTGATCACCGGAGCAGCAAGTGGAATCGGAAAAGAAACCGCCGCGAAATTCATCAACAACGGTGCCAAAGTTGTAATAGCAGATGTACAAAATCAGGTCGGCCAAGAAACTGCCTCGGAGCTGGGGCCAAACGCCTCTTTTGTGGTCTGCGATGTCACAAAAGAATCCGACGTCTCCAATGCAGTGGATTTCACCATCTCCAGCCACGGAAAACTCGACATTATGTACAACAATGCAG...................................................................................GTATACCATGTTGTACTCCACGTTCCATAGCTGATCTTGACCTCGATGCATTTGATAGAGTCATGGCTATCAACGTCCGTGGGGTGATAGCAGGGATTAAACACGCAGCTCGAGTGATGATCCCACNGTAAACCGGTTCCATATTGTGCACAGCTAGTGTCACAGGGGTGATAGGAGGTCTAGCGCAACCTACATATTCGACAACCAAATCCTGTGTGATCGGAATCATGAGATCAGTTACAGCAGAACTAAGTCAGAACGGAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E745554" ref_strand="+" ref_description="SGN-E745554 [GI|47105900]">
      <seq>gaaccaaaagagaagcggaaaataataatacatccgcccctagtgaccgcagtcatctaaaccctccaccaatcacggcggcgcgtatactatcctgaactatcatcctatctgctccgccacttaagtgggcaatacagaggtttgcaaccacagctccaccgtttttactatgaattttgaggatgagaattttgaactgagagagattcagaggcttgaaggccacaccgataaggtttggagcgtcgcttggaaaccggctaccggaatcaatggtgtttcagctgtatttgcttcctgcagcggcgataaaaccgtacgaatctgggaagaggactccacaggctctttccagtgtcaggctgttttggaggaaacacatacacggactgttagatcatgtgcatggtcaccgtcgggcaaatttttggcaacagctagctttgatgccaccactgctatttgggaaaatgttggggttgactttgagtgtgtctccacgttggagggtcatgacaatgaagtgaaaagcgtttcttggaataattcgggctcactgcttgcgacatgtggacgagataagtcggtttggatatgggaagtgttgcctggaaatgagtttgactgtgtttcagtgttactaggccacacacaagatgttaagatggttcagtggaatccatctatggatactttgttctcatgtagttatgataacaccattaaggtttggatagaggatggcgatagtgatgattggcattgtattcaaactttgggtgaatctaatagtggacatacatctactgtctggtctctctctttcgatgctagtggagacaaaatggtttcttgcagtgatgaccttaccattaaggtatggactagcaaaatgcaggaaggggatcaaaatgcaccttgggaacatgtctgcaccctatctggatatcatgataggacaattttctcagttcattggtcaagggaaggaataattgctagtggagcagctgatgacgctatatgtttatttgttgagaataatgacaatgaggttgagggaccttcatttaaactacttctgaagaaagagaaggctcatgaaatggatgtaaattctgtgcaatggaactctggggataggaggcttcttgcttcggccagtgatgatgggactgtgaagatatgggagttggttcgtctctctggacagaagttgctgtgaacatagcttcacagcggatattagaaagcaatgcacatcattttccgatgtagaaacgtaatttacagtcatttcgagcctttatgaagtcttccagaaaatgttagctttagaaatgtgtttggaacaaagtgttagctttaggctttagaactgggtgtggaacacacatattgagatattgacatgttgagaacctccagcatttataagtttgtttttgaaaaatatattgtaatgagtaaagaagatatttggaattctcaattaataggctaaaaatagtaaactcactatagtaactaatcaatattttcttaataggtgtgtaaaatttaaatttgacaagtaaaaaaagatcgagggagtttgtaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="+" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="83726" stop="93544"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84025" g_stop="84388" g_length="364"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="364" r_length="364" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="84389" i_stop="85051" i_length="663">
            <donor d_prob="0.596" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="85052" g_stop="85198" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="365" r_stop="511" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="85199" i_stop="85504" i_length="306">
            <donor d_prob="0.813" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="85505" g_stop="85723" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="512" r_stop="730" r_length="219" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="85724" i_stop="85865" i_length="142">
            <donor d_prob="0.886" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="85866" g_stop="85930" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="731" r_stop="795" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="85931" i_stop="87446" i_length="1516">
            <donor d_prob="0.934" d_score="1.00"/>
            <acceptor a_prob="0.896" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="87447" g_stop="87512" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="796" r_stop="861" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="87513" i_stop="87629" i_length="117">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="87630" g_stop="87692" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="862" r_stop="924" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="87693" i_stop="89679" i_length="1987">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="89680" g_stop="89742" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="925" r_stop="987" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="89743" i_stop="90416" i_length="674">
            <donor d_prob="0.818" d_score="1.00"/>
            <acceptor a_prob="0.937" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="90417" g_stop="90486" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="988" r_stop="1057" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="90487" i_stop="91897" i_length="1411">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="91898" g_stop="91981" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1058" r_stop="1141" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="91982" i_stop="92784" i_length="803">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="92785" g_stop="93242" g_length="458"/>
          <reference_exon_boundary r_type="cDNA" r_start="1142" r_stop="1599" r_length="458" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1602" polyA_stop="1618"/>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="+" ref_id="SGN-E745554" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1599</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E745554" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84025" e_stop="84388"/>
          <exon e_start="85052" e_stop="85198"/>
          <exon e_start="85505" e_stop="85723"/>
          <exon e_start="85866" e_stop="85930"/>
          <exon e_start="87447" e_stop="87512"/>
          <exon e_start="87630" e_stop="87692"/>
          <exon e_start="89680" e_stop="89742"/>
          <exon e_start="90417" e_stop="90486"/>
          <exon e_start="91898" e_stop="91981"/>
          <exon e_start="92785" e_stop="93242"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACCAAAAGAGAAGCGGAAAATAATAATACATCCGCCCCTAGTGACCGCAGTCATCTAAACCCTCCACCAATCACGGCGGCGCGTATACTATCCTGAACTATCATCCTATCTGCTCCGCCACTTAAGTGGGCAATACAGAGGTTTGCAACCACAGCTCCACCGTTTTTACTATGAATTTTGAGGATGAGAATTTTGAACTGAGAGAGATTCAGAGGCTTGAAGGCCACACCGATAAGGTTTGGAGCGTCGCTTGGAAACCGGCTACCGGAATCAATGGTGTTTCAGCTGTATTTGCTTCCTGCAGCGGCGATAAAACCGTACGAATCTGGGAAGAGGACTCCACAGGCTCTTTCCAGTGTCAGGTTTGGTTTTTGTCTAGACATAAGCAAAATCAAAGCTTTTCATAAATTTGAAATTTTGATACTTGGAGTAGGTAGGAAATAAATTCTATGAGTAAATAAATATCACTTTCTGGTTTGACAATCGAATTTGCTCTACGATCAGTGGATCACTAAGTAAAGAGCTGCAATAAAAATTCAATTTTTTTTTCTAGTAATTAGTAATCTAAAATTTGTTAATAACTTGTTTACTATGAAGTATCAGTTTAATCCAAGAAAAACAAAAATTATGTAGTAGTAGAAATTAGTTCTTCACATGGAAGAAGTTTATGCGCTGGAACTATATTGACAAAGGAGTTACTTGTGAGAGTATCAGCTTCAAATCTGTTGTGTTAGGTTCTGCTTTAGTTCTTTGATCTTTATATTGAGATTTGGTAAGTTTCTCCTTTTATGAAGTATTATTTACTTATGGTAGTTAATTAAATTTATTGGAAAGCACACATGGGGTTGTGCAGCCACAGCCACAAAGCAAGGTGTACATTTTTTCCGTTTTCCTTGTTTCTTCTTCCTCTAGTAGTCTTTCCATGCTCAAGAAGTAACGTCATCTTCATCCTCTAGCTATAATGACTATTCAACCTGTAAGAATAAAAATCAAGCTGTAGTGACTATTTGAAGGAAATTTTGCAGGCTGTTTTGGAGGAAACACATACACGGACTGTTAGATCATGTGCATGGTCACCGTCGGGCAAATTTTTGGCAACAGCTAGCTTTGATGCCACCACTGCTATTTGGGAAAATGTTGGGGTTGACTTTGAGTGTGTCTCCACGTTGGAGGTACAGATACCTATTGGCTTCCGCCTCTCTTTCATTTTTATTACAGCGGCTCTAACAATAACCTCCACAAAGTAGGCAAAACTAATATCTTCTGTCCGTTAATATCTTTTGCATATCACAACATAAACTTCAGAAGAGAATTTGTTACCTGTGGAATTGTGCTTAATCCTTTAATTTGGCTGATATTGCTTTGTGATTCTAATTTACATTTACTTTTATATTTGACCTTTTTTCATTTTCTTTAATGGGCAACAAATCTACTTAACTCTTGTCTGTCTTCTTACTTTTCTTCCGGATAATGTTCAGGGTCATGACAATGAAGTGAAAAGCGTTTCTTGGAATAATTCGGGCTCACTGCTTGCGACATGTGGACGAGATAAGTCGGTTTGGATATGGGAAGTGTTGCCTGGAAATGAGTTTGACTGTGTTTCAGTGTTACTAGGCCACACACAAGATGTTAAGATGGTTCAGTGGAATCCATCTATGGATACTTTGTTCTCATGTAGTTATGATAACACCATTAAGGTATAAGGTTTAACTTTTCATCCCGCCCCCCATCTCTCTCTGTTTTAATACCCCTATTACAGGTATAGAATCGGTAGTCAACTTGTTTTTCATTCATATTTAAGTTATAATATCTAATCTCTAGTGGTTCTTGAAACTGCAGGTTTGGATAGAGGATGGCGATAGTGATGATTGGCATTGTATTCAAACTTTGGGTGAATCTAATAGGTAAGAGTCGTTATTGGGCAAAACAGAATCTTAAATTTATTGTTCCCCAGTATTGATTCAAATCCCATTCAAAAAACACTAGGGATTTGTTCCAGCGGCCGAGGTCTTAGTAATTAGAGTTCCCTAGCACCTGTATTGGCGGGAGATGGTAAGGGCCAGATGATTATTCGAGGTGTGCACAAGTCGGCTCAGACCACTGTTATAAAAAATGTTGAATCTTGAATTTATTGTATTTGCTAGTGGAGAAAAAATTGACCACTTAATTTGTTACTTTTGTCCAAAAAATAAAATAAAAAATGGACCACTTAAACTATGTCATCAAGGTGGTGATTGTATTCTTAGTGTTATAAGCCCTCTTTTATTTAGATTAGCCATATTTTATTGAAATGAGGTGACTTTCTTGGTGTGTAACATGAAGCTAATTTAATGTTGGTTATTAACACCTCCTCTGTCCGAAATTGACAAGTTTTGAGAATGAGAACTTCCTAATGATCATTTGCAGAATATGTGGGATCATAGGTTTTAAATCTTTCTAGGAATAAACAGATGGAAATCTTGCTTGGTAATTTACAAATAAGTTTATCATCATTCAAGAAGATCTCATTATAAGAGTCAATATGAAGTTAAATTTTTGGGGGAAAGAGATAGAGAAGAAGTTGGATAGGTGTCATAACATGGATGAATACTTGCATGCATTAGAGCAAGTGGACTTCTTTAGGCCCAAGTGTACGTTTTTTTTTTAGTTTCTTAGAGTGAAGTTTTTTATCCTTGTTTGTCCTAAAGAAGTTTGCATGTATGAGATTTGAAAGGAAGAGTAACTGTGTCAACAAGCCGAATCCTTTCTTGATGTAAAGGAACATGGGAAGAGATAGCTATGACATTCATTTACTAACTTATTCTTGAACTTGTGAAATTTATTTATTTGTGGGTGGGGAGATTATATGGGTATTGAAAAGCCGAAATATCTTCTTTCGAGCTGCTCTTACGAGTTTGCTCAGAAATGACAGGATAATGTTGTATGATAAATGGATGAAGTATTTTCAGTAATTCTGACCACCACCAGTTGATTGGATAAATAATGTTTGTGATCCCTCATTTATTTTCCCTTTTGGTGGTATATTTCTGTCTAGATAGTGTGTAAATATATCTTTTCTCCTGACAAACCTTTCATTATGCGATTATTTGGAAACTTCATATAATAGTCATCTGTTAGATTGCTGTTTTAGAGTGTCTGAATTCACTTGTAAAACCTTTTGTTTAAACTCTTGCACTCATCCTACTGACAGTGAAAAGGGGTCCATATGTACCCATATCAATGGAATGATTCAGGCATTTAAAAGTTCTGCTCTCAATTTTGTGCCGTCTTGACTGCTCTTTTACTGGTTTATCATATTTCCTCATTGGCCTAAAATGTCAGTGTATGGCCTATAAGAAGCAGTATGAGTGTTTTAGGGTATCAATAACTCTACTTAAAGATGTTTTGGGAGCTTATGTCACTACATGGTTGAACTTTCAGTGGACATACATCTACTGTCTGGTCTCTCTCTTTCGATGCTAGTGGAGACAAAATGGTTTCTTGCAGGTATGTTTTTCTTTCTGCTGAATTCATTTTAAACTATATGCTCTGAAGTCTCTTGAATAGGATAGTTGTTACAGTAACTACTTAAATAGAGTTTACATTGAATTCTGTGACTTGCAGTGATGACCTTACCATTAAGGTATGGACTAGCAAAATGCAGGAAGGGGATCAAAATGCACCTTGGTAAGTGTGATATTATCCTCCCTTTTCTAAGCATAATGTTATCCTATACAGTTGATTCATCCATAAGATAAGGAGTGGCACTACATGATGTAGGATTGGTATCAAACTGCACCCTGTGAACTAAGGGTTGATTGTCGATGATTTTTTTGGAAATCAGGTTAATTTGAAGTTCAAATTTTGCTTGGACATGCAATTTGAATCTCAAAAGGTGGTACTTTTTCTCGGAAACATGATAACCCCACAATTTGTGAAAATTATCAAAACTTTCCCAACACTTGTACAATCTTCCCAAATGAGCAAACCATAATTAGTAAACAAAGTATTGGAAGCACCACATTTATAGATCGTATATCTTCGTGTTCCTTTTATAAATAAGATAAATGCTTGCAATTACAAATGTTAAAATACACATAGTTTTACAAAGATCCATTGGCCCAATAAATCGACAAAAGTAATAACTAGCTATTCTTTAATATAGTCCTCCCCTCATGTATGGTATCGACAATCTCTTCACATCGAGCATGAGTCTTGTTAATTTAAAATTATGCTTATTTTTTTTGCAAAATATGAACTTATGGATCAAGTTTTAAATTTTTTTAAATTGAAATCACAAACTTGGAATTAAATTCCTACTCTTGGGAGAATTTGATATTTGAAATCATGATTTGAAGTTTAAGTTTGTTTAAATGTCATAACAAATGCTAATATCAAATCAAAATTTCAAATTTGAGCTTCAAATTGCATGGCCGAACGCCTACTAGTAATCAAGTGTGCAAGATATTAAAGCCTTCTGGGTGTATGATTTCTTCTGTTTCATGACTTTTACCTTTTTCTGGTTTATTAGTGTTTGTAGTTATGAAGTATTTACTTTTACATCCAAAACCAAAACGTTAAAAGATACTTTTTCGTATAAGGTATTGTAGCAGGGCGCCTCTATGTAGTTATGAACTATTTTATATCCTAAACCAACGTTAAAGAATATTTTTTCGTATAAGGTACTGCAGCAGGGTGCCTTAATGAGCCATCCTTATTTGTCTCTGGGCAATGTAATTAAGCAACAACATGCTCAGTTTTACGTGATTCAGCCGCCAATTAGACATGTAGATTCCAGTAAATCCTTTTGTATAAATATTATAATGCCAATTTGTTTCCAAAAGAAAGGGTTTGTATGATTCGAATATCAGTTAATGCATTAGGTGGACAATGATTTTTGTTCAGCTAAGACAACATTCATTGGTTTGTTCAAATTTTTCCTCATGCAGTCATGCCAAGAATGGTCCTCATTCGATTGGTGAACTTGTTCGATGTAGTTGTTCTTGTTGAAGTGTGTGATCGTCTCATCTAAAATTTTAAGCTGTTAGATAGACGATGCTTTTGTTTGTCTCTGGGCAATGTTATTAAGCAACAACATGCTCAGTTTTAAACGGTTCAGCCACCAATTAGCCATGTAAAATTCCAGTAAATTCCTTTTGTATAAATATTATAATGCCAATTTGTTTCCAAAAGAAAGGGTTTGTATAATTTGAATATCAATTAATGCATAAGGTGGACAATGATTTTTGTTCAGCTAAGACAACATTTATTGGTTTGTTCAAATTTTTCCTCATGCAGTCATGCCAAGAATGGTCTCATTCGATTGGTGAACTATGTTCGATGTAGTTGTTCTTGTTGAAGTGTATGATTGTCTCATCTAAATTTTTAAGCTGTTAGATAGAGCATGCTTTTATTTACTTACTTATGTCCTCAATACACGGACCTGATTCTTTTTCATGGCCAAGCATGTGGAAATTCTCTCTTTTTTTAAAAAAAATAATGGTCGGCGATGAGACTTGAACACCATGTTAAAGTGTGTGGCCATCTCGTTTAAAAGCTTAAACTTTTATAGAGAGGATACTTTTATTCACTTAATTATTATTTCAACAGTTCTCGGTAGTTACTATGTTTGCCAACTCCTGATTAGCAACCATCTCCTTTTTGTGCTTTTCAGGGAACATGTCTGCACCCTATCTGGATATCATGATAGGACAATTTTCTCAGTTCATTGGTCAAGGTAGCTTCTCTATGACCCTGTTTGGATGGGCATAAAGCTTCTTTTAAGTTCTTTTCAGCCTTTTGGAGTGTTGAGCAAAATTCATAGTAACTTTTAAGTTAAGTGCTTTTAAGCCAAAAGCAATAAGTTGGCAACTGTATTACTTCAGCTTAACAACTTTTTTGCTTTGATTAATCTGTTAACTTTTTTATCATAAATAATTATTTTTATCCAATATAAATTAACTCCAGGACTTGAAGCTTAAAAGCTACTTATATTCAGCCAATCAGAACAGGTTCTATATCTATTTTCTTATCATACTCATGCTAAGTATGCTTTCCCTTTTTGAAACCCCTAATATTACCTTTCTCTGATAAGGTTTTTCTTTTGTCTCTTTTTCTTAAAGTGTGTTTTTAGTTTGTTTTTTTTTTTTTTTTTTTGGGGGGTGGGGGGGGGGGTATCAATAAAATCTCTTGCATCTTTTTCCATAAATAAAGAGTTTTATACCTTGTGTGGTGCTGTCTAGATTTTATGTTTGATCAGTTTTATCAGGACTAGTATGCATGTTATTACCTTAGTTGCCTCGGGGGCAATTTGTAAACATTATATGAATTTTTCAGTAATGAGGGCTTGTAGTTATGATAATTTGCCCTGTCATCCTACAGTCTAACATACTTCATATGCTAAAATGTCAGGGAAGGAATAATTGCTAGTGGAGCAGCTGATGACGCTATATGTTTATTTGTTGAGAATAATGACAATGAGGTATTAAAACACCTTTATTGTCCCTTTTTCTTTTAATAATCATGTATTCCAGATATAATATCTACAATGGCGGATCCAAGAATTCACTACGGGATGTCAAATTTTGTAGTAAACCCACGAAAGAAGCCAAAAGGAGTCAATATATAGTATATACACATAAAAATATTTTTTTACCTAGCTACTCAGTGTAATTTTCTCTGAAGGGTGTCAATTGACACCCCTCGAATACATGTGGCTCCTACACTGATATCTAGCACAGTGGTGAATTTTGTCCTGCTCTGTTCTCACTTCCCCCAATCCTTCTCTTATTCACTCCAATTCTTTGGGGAGCTAGATTGTGGGGTGTTCTTCAGGGAAGTCATTGTTCACCCTCTGCTATGTGGTTCCTTGCTAAAATATTGACTTCTTGAGTTTTTGTGGGTTCTTTATTTCTTGTGAAGGAAGTAACTGGAGTGACTACTTCCTTTTTATTCTTTTTCTAGATGTTGGGTCTCTGTGAAAAGACCGACAGAGGTGAGTTTTCATTTGGTTACCTCAGGCTCCCTGTTTAAATACCATTAAGTTAGTAAATACAATTCAGGTGGATCTGTTATTCTGTCATAAAAGAAACTAAATAGCTCAGAGGACCGCTTCTTTTTCCTACAATTTTCAAGTTTTCCAGGCTAATGAGCAGATGACAGTGTCCCAGTTTCATGGGAAATAGGAATAACAACCTGGAGATTTCAGGTTCGGATCCCATCTAGAACACTAGGATTGTTCCCATTGACTTCAAGCCTTGCTGGCTGGATTACCTTGGCAGCATTTTCTTGCACGCTGAACAGGCTGCCTGATAGTAGTCGAGGTGCCAGCAAGCTTCCACAAACTCCAGCCATGTATATAAATATAAATGGGAGAAAAGAGAAGATTTACAGTAAAGGATCCTGATAACTGCGTAGGACAGTACTTGGTTCCTGACTTAGTGCCCGTTTGGATTGACTTATTTTATGTGTTTTTAAGCAGTTTTGAAGTGTTTGGGTAAAGTTAAAAAGTGCTTATAAGCACTTTTTTTAAAGATAAAATAACAAAAATAAGCCAAAAGTCATAAGTTAGAAATTCTAACTTATGGCTTTTGGCTTATAAGTCATAAGCCAATCCAAATAGGCCCTTAGTTCTTCTGGCCTAATCATCTATCCACTTGAATATCTTTGTTAAATTTTGATACATTGTCAGGAAGAAAAATATGTTAAATCAGGCTGAGTAGAAAATCCATTAGAGACGGCTGTAAAATTAGAAAAAATTGCCTCCATTAACTGTATTATAATTCTAAAAAGTCATATGAATGTTGTCGATATACAACTACTGCAAGTATTCTATTATCACCTCTTCCAACTCTCATTTGGCATAACAATAAAAATTTACTGTCTGATGGCAGGTTGAGGGACCTTCATTTAAACTACTTCTGAAGAAAGAGAAGGCTCATGAAATGGATGTAAATTCTGTGCAATGGAACTCTGGGGTAAGTCAATGGGGTACCAGACTCAGATTTTTGACATTTACTTGTTCATCTGTTGTTGCTTTGACTCTGTATTAGTCTCTGCTGCAAGATGATTTATTTTTTAGTAGAAGCCAAGATCACCTGAAAATTTCTTCAGCTTGTTAGGGCTGATAATCTGTTACCCATTCAATCCCTTGTTTAATTGCCACGTTGAAGTGTAACTAGTGTCTGACCTTTCCAACGTATCTTGGATTGGCGCTTGATGATGCAGTAATCTGCTTGTTTCGTATAGCAGTCTTACTGTGGATAAGACGAGTGGCACCTAAATTCGGACATGCTAGATTGAGAAAAGCTTATTAAGATGATGTTTCATTTTTTGATATATGAATTTGATGTCTGACCAATATTCCGTTTGAATCTCGACTTTCAAATCCACAATTCTAAATGGAGCCTTGGGTTATTGTGCGGTGAGATGGTATTACACATTATAAATGTTGGCATTACTGAGAACACATAAAAGCATTTAACTTTGTTAACCTCAGTTTTTCGTTACTTTCCGTTGACTTATGTGGCACATAATGTGTCAGAGCTGACTATTTGTGTCGGGTACGTCAAATATATTAGGCACTAAAATGATTGTTGTAAGGTTTTCAAGGAGATGAAATGTTTGTCTTCAGTTGTGTTCTCAAATATTCAATCTTAAACTGTTTCGTGTAGAGGCTATTTGAGTTTCATTTCTATGTCCCTCACAGCATGAAAATAAGATTCTCTTTGGTTAAATAAATGCTCTGCAGTATGTTTACGTTCTTCTGTCAATCATGCAGGATAGGAGGCTTCTTGCTTCGGCCAGTGATGATGGGACTGTGAAGATATGGGAGTTGGTTCGTCTCTCTGGACAGAAGTTGCTGTGAACATAGCTTCACAGCGGATATTAGAAAGCAATGCACATCATTTTCCGATGTAGAAACGTAATTTACAGTCATTTCGAGCCTTTATGAAGTCTTCCAGAAAATGTTAGCTTTAGAAATGTGTTTGGAACAAAGTGTTAGCTTTAGGCTTTAGAACTGGGTGTGGAACACACATATTGAGATATTGACATGTTGAGAACCTCCAGCATTTATAAGTTTGTTTTTGAAAAATATATTGTAATGAGTAAAGAAGATATTTGGAATTCTCAATTAATAGGCTAAAAATAGTAAACTCACTATAGTAACTAATCAATATTTTCTTAATAGGTGTGTAAAATTTAAATTTGACAAGTAAAAAAAGATCGAGGGAGTTT</genome_strand>
        <mrna_strand>GAACCAAAAGAGAAGCGGAAAATAATAATACATCCGCCCCTAGTGACCGCAGTCATCTAAACCCTCCACCAATCACGGCGGCGCGTATACTATCCTGAACTATCATCCTATCTGCTCCGCCACTTAAGTGGGCAATACAGAGGTTTGCAACCACAGCTCCACCGTTTTTACTATGAATTTTGAGGATGAGAATTTTGAACTGAGAGAGATTCAGAGGCTTGAAGGCCACACCGATAAGGTTTGGAGCGTCGCTTGGAAACCGGCTACCGGAATCAATGGTGTTTCAGCTGTATTTGCTTCCTGCAGCGGCGATAAAACCGTACGAATCTGGGAAGAGGACTCCACAGGCTCTTTCCAGTGTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTTTTGGAGGAAACACATACACGGACTGTTAGATCATGTGCATGGTCACCGTCGGGCAAATTTTTGGCAACAGCTAGCTTTGATGCCACCACTGCTATTTGGGAAAATGTTGGGGTTGACTTTGAGTGTGTCTCCACGTTGGAG..................................................................................................................................................................................................................................................................................................................GGTCATGACAATGAAGTGAAAAGCGTTTCTTGGAATAATTCGGGCTCACTGCTTGCGACATGTGGACGAGATAAGTCGGTTTGGATATGGGAAGTGTTGCCTGGAAATGAGTTTGACTGTGTTTCAGTGTTACTAGGCCACACACAAGATGTTAAGATGGTTCAGTGGAATCCATCTATGGATACTTTGTTCTCATGTAGTTATGATAACACCATTAAG..............................................................................................................................................GTTTGGATAGAGGATGGCGATAGTGATGATTGGCATTGTATTCAAACTTTGGGTGAATCTAATAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACATACATCTACTGTCTGGTCTCTCTCTTTCGATGCTAGTGGAGACAAAATGGTTTCTTGCAG.....................................................................................................................TGATGACCTTACCATTAAGGTATGGACTAGCAAAATGCAGGAAGGGGATCAAAATGCACCTTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACATGTCTGCACCCTATCTGGATATCATGATAGGACAATTTTCTCAGTTCATTGGTCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAGGAATAATTGCTAGTGGAGCAGCTGATGACGCTATATGTTTATTTGTTGAGAATAATGACAATGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGGGACCTTCATTTAAACTACTTCTGAAGAAAGAGAAGGCTCATGAAATGGATGTAAATTCTGTGCAATGGAACTCTGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAGGAGGCTTCTTGCTTCGGCCAGTGATGATGGGACTGTGAAGATATGGGAGTTGGTTCGTCTCTCTGGACAGAAGTTGCTGTGAACATAGCTTCACAGCGGATATTAGAAAGCAATGCACATCATTTTCCGATGTAGAAACGTAATTTACAGTCATTTCGAGCCTTTATGAAGTCTTCCAGAAAATGTTAGCTTTAGAAATGTGTTTGGAACAAAGTGTTAGCTTTAGGCTTTAGAACTGGGTGTGGAACACACATATTGAGATATTGACATGTTGAGAACCTCCAGCATTTATAAGTTTGTTTTTGAAAAATATATTGTAATGAGTAAAGAAGATATTTGGAATTCTCAATTAATAGGCTAAAAATAGTAAACTCACTATAGTAACTAATCAATATTTTCTTAATAGGTGTGTAAAATTTAAATTTGACAAGTAAAAAAAGATCGAGGGAGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E244375" ref_strand="+" ref_description="SGN-E244375 [cLEF-3-I18]">
      <seq>cgcccctagtgaccgcagtcatctaaaccctccaccaatcacggcggcgcgtatactatcctgaactatcatcctatctgctccgccacttaagtgggcaatacagaggtttgcaaccacagctccaccgtttttactatgaattttgaggatgagaattttgaactgagagagattcagaggcttgaaggccacaccgataaggtttggagcgtcgcttggaaaccggctaccggaatcaatggtgtttcagctgtatttgcttcctgcagcggcgataaaaccgtacgaatctgggaagaggactccacaggctctttccagtgtcaggctgttttggaggaaacacatacacggactgttagatcatgtgcatggtcaccgtcgggcaaatttttggcaacagctagctttgatgccaccactgctatttgggaaaatgttggggttgactttgagtgtgtctccacgttggagggtcatgacaatgaagtgaaaagccgtttctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="+" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="83759" stop="85835"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84059" g_stop="84388" g_length="330"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="330" r_length="330" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="84389" i_stop="85051" i_length="663">
            <donor d_prob="0.596" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="85052" g_stop="85198" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="331" r_stop="477" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="85199" i_stop="85504" i_length="306">
            <donor d_prob="0.813" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="85505" g_stop="85535" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="478" r_stop="509" r_length="32" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="+" ref_id="SGN-E244375" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>508</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E244375" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84059" e_stop="84388"/>
          <exon e_start="85052" e_stop="85198"/>
          <exon e_start="85505" e_stop="85535"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCCCCTAGTGACCGCAGTCATCTAAACCCTCCACCAATCACGGCGGCGCGTATACTATCCTGAACTATCATCCTATCTGCTCCGCCACTTAAGTGGGCAATACAGAGGTTTGCAACCACAGCTCCACCGTTTTTACTATGAATTTTGAGGATGAGAATTTTGAACTGAGAGAGATTCAGAGGCTTGAAGGCCACACCGATAAGGTTTGGAGCGTCGCTTGGAAACCGGCTACCGGAATCAATGGTGTTTCAGCTGTATTTGCTTCCTGCAGCGGCGATAAAACCGTACGAATCTGGGAAGAGGACTCCACAGGCTCTTTCCAGTGTCAGGTTTGGTTTTTGTCTAGACATAAGCAAAATCAAAGCTTTTCATAAATTTGAAATTTTGATACTTGGAGTAGGTAGGAAATAAATTCTATGAGTAAATAAATATCACTTTCTGGTTTGACAATCGAATTTGCTCTACGATCAGTGGATCACTAAGTAAAGAGCTGCAATAAAAATTCAATTTTTTTTTCTAGTAATTAGTAATCTAAAATTTGTTAATAACTTGTTTACTATGAAGTATCAGTTTAATCCAAGAAAAACAAAAATTATGTAGTAGTAGAAATTAGTTCTTCACATGGAAGAAGTTTATGCGCTGGAACTATATTGACAAAGGAGTTACTTGTGAGAGTATCAGCTTCAAATCTGTTGTGTTAGGTTCTGCTTTAGTTCTTTGATCTTTATATTGAGATTTGGTAAGTTTCTCCTTTTATGAAGTATTATTTACTTATGGTAGTTAATTAAATTTATTGGAAAGCACACATGGGGTTGTGCAGCCACAGCCACAAAGCAAGGTGTACATTTTTTCCGTTTTCCTTGTTTCTTCTTCCTCTAGTAGTCTTTCCATGCTCAAGAAGTAACGTCATCTTCATCCTCTAGCTATAATGACTATTCAACCTGTAAGAATAAAAATCAAGCTGTAGTGACTATTTGAAGGAAATTTTGCAGGCTGTTTTGGAGGAAACACATACACGGACTGTTAGATCATGTGCATGGTCACCGTCGGGCAAATTTTTGGCAACAGCTAGCTTTGATGCCACCACTGCTATTTGGGAAAATGTTGGGGTTGACTTTGAGTGTGTCTCCACGTTGGAGGTACAGATACCTATTGGCTTCCGCCTCTCTTTCATTTTTATTACAGCGGCTCTAACAATAACCTCCACAAAGTAGGCAAAACTAATATCTTCTGTCCGTTAATATCTTTTGCATATCACAACATAAACTTCAGAAGAGAATTTGTTACCTGTGGAATTGTGCTTAATCCTTTAATTTGGCTGATATTGCTTTGTGATTCTAATTTACATTTACTTTTATATTTGACCTTTTTTCATTTTCTTTAATGGGCAACAAATCTACTTAACTCTTGTCTGTCTTCTTACTTTTCTTCCGGATAATGTTCAGGGTCATGACAATGAAGTGAAAAG-CGTTTCTT</genome_strand>
        <mrna_strand>CGCCCCTAGTGACCGCAGTCATCTAAACCCTCCACCAATCACGGCGGCGCGTATACTATCCTGAACTATCATCCTATCTGCTCCGCCACTTAAGTGGGCAATACAGAGGTTTGCAACCACAGCTCCACCGTTTTTACTATGAATTTTGAGGATGAGAATTTTGAACTGAGAGAGATTCAGAGGCTTGAAGGCCACACCGATAAGGTTTGGAGCGTCGCTTGGAAACCGGCTACCGGAATCAATGGTGTTTCAGCTGTATTTGCTTCCTGCAGCGGCGATAAAACCGTACGAATCTGGGAAGAGGACTCCACAGGCTCTTTCCAGTGTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTTTTGGAGGAAACACATACACGGACTGTTAGATCATGTGCATGGTCACCGTCGGGCAAATTTTTGGCAACAGCTAGCTTTGATGCCACCACTGCTATTTGGGAAAATGTTGGGGTTGACTTTGAGTGTGTCTCCACGTTGGAG..................................................................................................................................................................................................................................................................................................................GGTCATGACAATGAAGTGAAAAGCCGTTTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E249437" ref_strand="+" ref_description="SGN-E249437 [cLEF-50-F16]">
      <seq>ctaaactttccaccaatcacggcggcgcgtatactatcctgaactatcatcctatctgctccgccacttaagtgggcaatacagaggtttgcaaccacagctccaccgtttttactatgaattttgaggatgagaattttgaactgatagagattcataggcttgaaggccacaccgataaggtttggagcgtcgcttggaaaccggctaccggaatcaatggtgtttcagctgtatttgcttcctgcagcggcgataaaaccgtactaatctgggaagaagactccacaggctctttccagtgtcaggctgttttggaggaaacacatacacggactgttagatcatgtgcatggtcaccgtcaggcaaatatttggcaacagctagctttgatgccaccactgctatttgggaaaatgttggggttgactttgagtgtgtctccacgttggaaggtcatgacaatgaagtgaaaagcgtttcttggaataattcgggctcactgcttgcgacatgtgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="+" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="83781" stop="85870"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84081" g_stop="84388" g_length="308"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="308" r_length="308" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="84389" i_stop="85051" i_length="663">
            <donor d_prob="0.596" d_score="0.96"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="85052" g_stop="85198" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="455" r_length="147" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="85199" i_stop="85504" i_length="306">
            <donor d_prob="0.813" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="85505" g_stop="85570" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="521" r_length="66" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="+" ref_id="SGN-E249437" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>521</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E249437" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84081" e_stop="84388"/>
          <exon e_start="85052" e_stop="85198"/>
          <exon e_start="85505" e_stop="85570"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAAACCCTCCACCAATCACGGCGGCGCGTATACTATCCTGAACTATCATCCTATCTGCTCCGCCACTTAAGTGGGCAATACAGAGGTTTGCAACCACAGCTCCACCGTTTTTACTATGAATTTTGAGGATGAGAATTTTGAACTGAGAGAGATTCAGAGGCTTGAAGGCCACACCGATAAGGTTTGGAGCGTCGCTTGGAAACCGGCTACCGGAATCAATGGTGTTTCAGCTGTATTTGCTTCCTGCAGCGGCGATAAAACCGTACGAATCTGGGAAGAGGACTCCACAGGCTCTTTCCAGTGTCAGGTTTGGTTTTTGTCTAGACATAAGCAAAATCAAAGCTTTTCATAAATTTGAAATTTTGATACTTGGAGTAGGTAGGAAATAAATTCTATGAGTAAATAAATATCACTTTCTGGTTTGACAATCGAATTTGCTCTACGATCAGTGGATCACTAAGTAAAGAGCTGCAATAAAAATTCAATTTTTTTTTCTAGTAATTAGTAATCTAAAATTTGTTAATAACTTGTTTACTATGAAGTATCAGTTTAATCCAAGAAAAACAAAAATTATGTAGTAGTAGAAATTAGTTCTTCACATGGAAGAAGTTTATGCGCTGGAACTATATTGACAAAGGAGTTACTTGTGAGAGTATCAGCTTCAAATCTGTTGTGTTAGGTTCTGCTTTAGTTCTTTGATCTTTATATTGAGATTTGGTAAGTTTCTCCTTTTATGAAGTATTATTTACTTATGGTAGTTAATTAAATTTATTGGAAAGCACACATGGGGTTGTGCAGCCACAGCCACAAAGCAAGGTGTACATTTTTTCCGTTTTCCTTGTTTCTTCTTCCTCTAGTAGTCTTTCCATGCTCAAGAAGTAACGTCATCTTCATCCTCTAGCTATAATGACTATTCAACCTGTAAGAATAAAAATCAAGCTGTAGTGACTATTTGAAGGAAATTTTGCAGGCTGTTTTGGAGGAAACACATACACGGACTGTTAGATCATGTGCATGGTCACCGTCGGGCAAATTTTTGGCAACAGCTAGCTTTGATGCCACCACTGCTATTTGGGAAAATGTTGGGGTTGACTTTGAGTGTGTCTCCACGTTGGAGGTACAGATACCTATTGGCTTCCGCCTCTCTTTCATTTTTATTACAGCGGCTCTAACAATAACCTCCACAAAGTAGGCAAAACTAATATCTTCTGTCCGTTAATATCTTTTGCATATCACAACATAAACTTCAGAAGAGAATTTGTTACCTGTGGAATTGTGCTTAATCCTTTAATTTGGCTGATATTGCTTTGTGATTCTAATTTACATTTACTTTTATATTTGACCTTTTTTCATTTTCTTTAATGGGCAACAAATCTACTTAACTCTTGTCTGTCTTCTTACTTTTCTTCCGGATAATGTTCAGGGTCATGACAATGAAGTGAAAAGCGTTTCTTGGAATAATTCGGGCTCACTGCTTGCGACATGTGGA</genome_strand>
        <mrna_strand>CTAAACTTTCCACCAATCACGGCGGCGCGTATACTATCCTGAACTATCATCCTATCTGCTCCGCCACTTAAGTGGGCAATACAGAGGTTTGCAACCACAGCTCCACCGTTTTTACTATGAATTTTGAGGATGAGAATTTTGAACTGATAGAGATTCATAGGCTTGAAGGCCACACCGATAAGGTTTGGAGCGTCGCTTGGAAACCGGCTACCGGAATCAATGGTGTTTCAGCTGTATTTGCTTCCTGCAGCGGCGATAAAACCGTACTAATCTGGGAAGAAGACTCCACAGGCTCTTTCCAGTGTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTTTTGGAGGAAACACATACACGGACTGTTAGATCATGTGCATGGTCACCGTCAGGCAAATATTTGGCAACAGCTAGCTTTGATGCCACCACTGCTATTTGGGAAAATGTTGGGGTTGACTTTGAGTGTGTCTCCACGTTGGAA..................................................................................................................................................................................................................................................................................................................GGTCATGACAATGAAGTGAAAAGCGTTTCTTGGAATAATTCGGGCTCACTGCTTGCGACATGTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E303508" ref_strand="+" ref_description="SGN-E303508 [cLEX-2-H13]">
      <seq>aatcacggcggcgcgtatactatcctgaactatcatcctatctgctccgccacttaagtgggcaatacagaggtttgcaaccacagctccaccgtttttactatgaattttgaggatgagaattttgaactgagagagattcagaggcttgaaggccacaccgataaggtttggagcgtcgcttggaaaccggctaccggaatcaatggtgtttcagctgtatttgcttcctgcagcggcgataaaaccgtacgaatctgggaagaggactccacaggctctttccagtgtcaggctgttttggaggaaacacatacacggactgttagatcatgtgcatggtcaccgtcgggcaaatttttggcaacagctagctttgatgccaccactgctat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="+" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="83795" stop="85452"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84095" g_stop="84388" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="294" r_length="294" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="84389" i_stop="85051" i_length="663">
            <donor d_prob="0.596" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="85052" g_stop="85152" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="395" r_length="101" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="+" ref_id="SGN-E303508" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>395</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E303508" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84095" e_stop="84388"/>
          <exon e_start="85052" e_stop="85152"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCACGGCGGCGCGTATACTATCCTGAACTATCATCCTATCTGCTCCGCCACTTAAGTGGGCAATACAGAGGTTTGCAACCACAGCTCCACCGTTTTTACTATGAATTTTGAGGATGAGAATTTTGAACTGAGAGAGATTCAGAGGCTTGAAGGCCACACCGATAAGGTTTGGAGCGTCGCTTGGAAACCGGCTACCGGAATCAATGGTGTTTCAGCTGTATTTGCTTCCTGCAGCGGCGATAAAACCGTACGAATCTGGGAAGAGGACTCCACAGGCTCTTTCCAGTGTCAGGTTTGGTTTTTGTCTAGACATAAGCAAAATCAAAGCTTTTCATAAATTTGAAATTTTGATACTTGGAGTAGGTAGGAAATAAATTCTATGAGTAAATAAATATCACTTTCTGGTTTGACAATCGAATTTGCTCTACGATCAGTGGATCACTAAGTAAAGAGCTGCAATAAAAATTCAATTTTTTTTTCTAGTAATTAGTAATCTAAAATTTGTTAATAACTTGTTTACTATGAAGTATCAGTTTAATCCAAGAAAAACAAAAATTATGTAGTAGTAGAAATTAGTTCTTCACATGGAAGAAGTTTATGCGCTGGAACTATATTGACAAAGGAGTTACTTGTGAGAGTATCAGCTTCAAATCTGTTGTGTTAGGTTCTGCTTTAGTTCTTTGATCTTTATATTGAGATTTGGTAAGTTTCTCCTTTTATGAAGTATTATTTACTTATGGTAGTTAATTAAATTTATTGGAAAGCACACATGGGGTTGTGCAGCCACAGCCACAAAGCAAGGTGTACATTTTTTCCGTTTTCCTTGTTTCTTCTTCCTCTAGTAGTCTTTCCATGCTCAAGAAGTAACGTCATCTTCATCCTCTAGCTATAATGACTATTCAACCTGTAAGAATAAAAATCAAGCTGTAGTGACTATTTGAAGGAAATTTTGCAGGCTGTTTTGGAGGAAACACATACACGGACTGTTAGATCATGTGCATGGTCACCGTCGGGCAAATTTTTGGCAACAGCTAGCTTTGATGCCACCACTGCTAT</genome_strand>
        <mrna_strand>AATCACGGCGGCGCGTATACTATCCTGAACTATCATCCTATCTGCTCCGCCACTTAAGTGGGCAATACAGAGGTTTGCAACCACAGCTCCACCGTTTTTACTATGAATTTTGAGGATGAGAATTTTGAACTGAGAGAGATTCAGAGGCTTGAAGGCCACACCGATAAGGTTTGGAGCGTCGCTTGGAAACCGGCTACCGGAATCAATGGTGTTTCAGCTGTATTTGCTTCCTGCAGCGGCGATAAAACCGTACGAATCTGGGAAGAGGACTCCACAGGCTCTTTCCAGTGTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTTTTGGAGGAAACACATACACGGACTGTTAGATCATGTGCATGGTCACCGTCGGGCAAATTTTTGGCAACAGCTAGCTTTGATGCCACCACTGCTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E725267" ref_strand="+" ref_description="SGN-E725267 [FC26CD05]">
      <seq>ccatggggatccgattcgatgctagtggagacaaaatggtttcttgcagtgatgaccttaccattaaggtatggactagcaaaatgcaggaaggggatcaaaatgcaccttgggaacatgtctgcaccctatctggatatcatgataggacaattttctcagttcattggtcaagggaaggaataattgctagtggagcagctgatgacgctatatgtttatttgttgagaataatgacaatgaggttgagggaccttcatttaaactacttctgaagaaagagaaggctcatgaaatggatgtaaattctgtgcaatggaactctggggataggaggcttcttgcttcggccagtgatgatgggactgtgaagatatgggagttggttcgtctctctggacagaagttgctgtgaacatagcttcacagcggatattagaaagcaatgcacatcattttccgatgtagaaacgtaatttacagtcatttcgagcctttatgaagtcttccagaaaatgttagctttagaaatgtgtttggaacaaagtgttagctttaggctttagaactgggtgtggaacacacatattgagatattgacatgttgagaacctccagcatttataagtttgtttttgaaaaatatattgtaatgagtaaagaagatatttggaattct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="+" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="87178" stop="93435"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87464" g_stop="87512" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="49" r_length="49" r_score="0.796"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="87513" i_stop="87629" i_length="117">
            <donor d_prob="1.000" d_score="0.80"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="87630" g_stop="87692" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="112" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="87693" i_stop="89679" i_length="1987">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89680" g_stop="89742" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="113" r_stop="175" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="89743" i_stop="90416" i_length="674">
            <donor d_prob="0.818" d_score="1.00"/>
            <acceptor a_prob="0.937" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="90417" g_stop="90486" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="245" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="90487" i_stop="91897" i_length="1411">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="91898" g_stop="91981" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="329" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="91982" i_stop="92784" i_length="803">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="92785" g_stop="93135" g_length="351"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="680" r_length="351" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="+" ref_id="SGN-E725267" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E725267" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87464" e_stop="87512"/>
          <exon e_start="87630" e_stop="87692"/>
          <exon e_start="89680" e_stop="89742"/>
          <exon e_start="90417" e_stop="90486"/>
          <exon e_start="91898" e_stop="91981"/>
          <exon e_start="92785" e_stop="93135"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGGTCTCTCTCTTTCGATGCTAGTGGAGACAAAATGGTTTCTTGCAGGTATGTTTTTCTTTCTGCTGAATTCATTTTAAACTATATGCTCTGAAGTCTCTTGAATAGGATAGTTGTTACAGTAACTACTTAAATAGAGTTTACATTGAATTCTGTGACTTGCAGTGATGACCTTACCATTAAGGTATGGACTAGCAAAATGCAGGAAGGGGATCAAAATGCACCTTGGTAAGTGTGATATTATCCTCCCTTTTCTAAGCATAATGTTATCCTATACAGTTGATTCATCCATAAGATAAGGAGTGGCACTACATGATGTAGGATTGGTATCAAACTGCACCCTGTGAACTAAGGGTTGATTGTCGATGATTTTTTTGGAAATCAGGTTAATTTGAAGTTCAAATTTTGCTTGGACATGCAATTTGAATCTCAAAAGGTGGTACTTTTTCTCGGAAACATGATAACCCCACAATTTGTGAAAATTATCAAAACTTTCCCAACACTTGTACAATCTTCCCAAATGAGCAAACCATAATTAGTAAACAAAGTATTGGAAGCACCACATTTATAGATCGTATATCTTCGTGTTCCTTTTATAAATAAGATAAATGCTTGCAATTACAAATGTTAAAATACACATAGTTTTACAAAGATCCATTGGCCCAATAAATCGACAAAAGTAATAACTAGCTATTCTTTAATATAGTCCTCCCCTCATGTATGGTATCGACAATCTCTTCACATCGAGCATGAGTCTTGTTAATTTAAAATTATGCTTATTTTTTTTGCAAAATATGAACTTATGGATCAAGTTTTAAATTTTTTTAAATTGAAATCACAAACTTGGAATTAAATTCCTACTCTTGGGAGAATTTGATATTTGAAATCATGATTTGAAGTTTAAGTTTGTTTAAATGTCATAACAAATGCTAATATCAAATCAAAATTTCAAATTTGAGCTTCAAATTGCATGGCCGAACGCCTACTAGTAATCAAGTGTGCAAGATATTAAAGCCTTCTGGGTGTATGATTTCTTCTGTTTCATGACTTTTACCTTTTTCTGGTTTATTAGTGTTTGTAGTTATGAAGTATTTACTTTTACATCCAAAACCAAAACGTTAAAAGATACTTTTTCGTATAAGGTATTGTAGCAGGGCGCCTCTATGTAGTTATGAACTATTTTATATCCTAAACCAACGTTAAAGAATATTTTTTCGTATAAGGTACTGCAGCAGGGTGCCTTAATGAGCCATCCTTATTTGTCTCTGGGCAATGTAATTAAGCAACAACATGCTCAGTTTTACGTGATTCAGCCGCCAATTAGACATGTAGATTCCAGTAAATCCTTTTGTATAAATATTATAATGCCAATTTGTTTCCAAAAGAAAGGGTTTGTATGATTCGAATATCAGTTAATGCATTAGGTGGACAATGATTTTTGTTCAGCTAAGACAACATTCATTGGTTTGTTCAAATTTTTCCTCATGCAGTCATGCCAAGAATGGTCCTCATTCGATTGGTGAACTTGTTCGATGTAGTTGTTCTTGTTGAAGTGTGTGATCGTCTCATCTAAAATTTTAAGCTGTTAGATAGACGATGCTTTTGTTTGTCTCTGGGCAATGTTATTAAGCAACAACATGCTCAGTTTTAAACGGTTCAGCCACCAATTAGCCATGTAAAATTCCAGTAAATTCCTTTTGTATAAATATTATAATGCCAATTTGTTTCCAAAAGAAAGGGTTTGTATAATTTGAATATCAATTAATGCATAAGGTGGACAATGATTTTTGTTCAGCTAAGACAACATTTATTGGTTTGTTCAAATTTTTCCTCATGCAGTCATGCCAAGAATGGTCTCATTCGATTGGTGAACTATGTTCGATGTAGTTGTTCTTGTTGAAGTGTATGATTGTCTCATCTAAATTTTTAAGCTGTTAGATAGAGCATGCTTTTATTTACTTACTTATGTCCTCAATACACGGACCTGATTCTTTTTCATGGCCAAGCATGTGGAAATTCTCTCTTTTTTTAAAAAAAATAATGGTCGGCGATGAGACTTGAACACCATGTTAAAGTGTGTGGCCATCTCGTTTAAAAGCTTAAACTTTTATAGAGAGGATACTTTTATTCACTTAATTATTATTTCAACAGTTCTCGGTAGTTACTATGTTTGCCAACTCCTGATTAGCAACCATCTCCTTTTTGTGCTTTTCAGGGAACATGTCTGCACCCTATCTGGATATCATGATAGGACAATTTTCTCAGTTCATTGGTCAAGGTAGCTTCTCTATGACCCTGTTTGGATGGGCATAAAGCTTCTTTTAAGTTCTTTTCAGCCTTTTGGAGTGTTGAGCAAAATTCATAGTAACTTTTAAGTTAAGTGCTTTTAAGCCAAAAGCAATAAGTTGGCAACTGTATTACTTCAGCTTAACAACTTTTTTGCTTTGATTAATCTGTTAACTTTTTTATCATAAATAATTATTTTTATCCAATATAAATTAACTCCAGGACTTGAAGCTTAAAAGCTACTTATATTCAGCCAATCAGAACAGGTTCTATATCTATTTTCTTATCATACTCATGCTAAGTATGCTTTCCCTTTTTGAAACCCCTAATATTACCTTTCTCTGATAAGGTTTTTCTTTTGTCTCTTTTTCTTAAAGTGTGTTTTTAGTTTGTTTTTTTTTTTTTTTTTTTGGGGGGTGGGGGGGGGGGTATCAATAAAATCTCTTGCATCTTTTTCCATAAATAAAGAGTTTTATACCTTGTGTGGTGCTGTCTAGATTTTATGTTTGATCAGTTTTATCAGGACTAGTATGCATGTTATTACCTTAGTTGCCTCGGGGGCAATTTGTAAACATTATATGAATTTTTCAGTAATGAGGGCTTGTAGTTATGATAATTTGCCCTGTCATCCTACAGTCTAACATACTTCATATGCTAAAATGTCAGGGAAGGAATAATTGCTAGTGGAGCAGCTGATGACGCTATATGTTTATTTGTTGAGAATAATGACAATGAGGTATTAAAACACCTTTATTGTCCCTTTTTCTTTTAATAATCATGTATTCCAGATATAATATCTACAATGGCGGATCCAAGAATTCACTACGGGATGTCAAATTTTGTAGTAAACCCACGAAAGAAGCCAAAAGGAGTCAATATATAGTATATACACATAAAAATATTTTTTTACCTAGCTACTCAGTGTAATTTTCTCTGAAGGGTGTCAATTGACACCCCTCGAATACATGTGGCTCCTACACTGATATCTAGCACAGTGGTGAATTTTGTCCTGCTCTGTTCTCACTTCCCCCAATCCTTCTCTTATTCACTCCAATTCTTTGGGGAGCTAGATTGTGGGGTGTTCTTCAGGGAAGTCATTGTTCACCCTCTGCTATGTGGTTCCTTGCTAAAATATTGACTTCTTGAGTTTTTGTGGGTTCTTTATTTCTTGTGAAGGAAGTAACTGGAGTGACTACTTCCTTTTTATTCTTTTTCTAGATGTTGGGTCTCTGTGAAAAGACCGACAGAGGTGAGTTTTCATTTGGTTACCTCAGGCTCCCTGTTTAAATACCATTAAGTTAGTAAATACAATTCAGGTGGATCTGTTATTCTGTCATAAAAGAAACTAAATAGCTCAGAGGACCGCTTCTTTTTCCTACAATTTTCAAGTTTTCCAGGCTAATGAGCAGATGACAGTGTCCCAGTTTCATGGGAAATAGGAATAACAACCTGGAGATTTCAGGTTCGGATCCCATCTAGAACACTAGGATTGTTCCCATTGACTTCAAGCCTTGCTGGCTGGATTACCTTGGCAGCATTTTCTTGCACGCTGAACAGGCTGCCTGATAGTAGTCGAGGTGCCAGCAAGCTTCCACAAACTCCAGCCATGTATATAAATATAAATGGGAGAAAAGAGAAGATTTACAGTAAAGGATCCTGATAACTGCGTAGGACAGTACTTGGTTCCTGACTTAGTGCCCGTTTGGATTGACTTATTTTATGTGTTTTTAAGCAGTTTTGAAGTGTTTGGGTAAAGTTAAAAAGTGCTTATAAGCACTTTTTTTAAAGATAAAATAACAAAAATAAGCCAAAAGTCATAAGTTAGAAATTCTAACTTATGGCTTTTGGCTTATAAGTCATAAGCCAATCCAAATAGGCCCTTAGTTCTTCTGGCCTAATCATCTATCCACTTGAATATCTTTGTTAAATTTTGATACATTGTCAGGAAGAAAAATATGTTAAATCAGGCTGAGTAGAAAATCCATTAGAGACGGCTGTAAAATTAGAAAAAATTGCCTCCATTAACTGTATTATAATTCTAAAAAGTCATATGAATGTTGTCGATATACAACTACTGCAAGTATTCTATTATCACCTCTTCCAACTCTCATTTGGCATAACAATAAAAATTTACTGTCTGATGGCAGGTTGAGGGACCTTCATTTAAACTACTTCTGAAGAAAGAGAAGGCTCATGAAATGGATGTAAATTCTGTGCAATGGAACTCTGGGGTAAGTCAATGGGGTACCAGACTCAGATTTTTGACATTTACTTGTTCATCTGTTGTTGCTTTGACTCTGTATTAGTCTCTGCTGCAAGATGATTTATTTTTTAGTAGAAGCCAAGATCACCTGAAAATTTCTTCAGCTTGTTAGGGCTGATAATCTGTTACCCATTCAATCCCTTGTTTAATTGCCACGTTGAAGTGTAACTAGTGTCTGACCTTTCCAACGTATCTTGGATTGGCGCTTGATGATGCAGTAATCTGCTTGTTTCGTATAGCAGTCTTACTGTGGATAAGACGAGTGGCACCTAAATTCGGACATGCTAGATTGAGAAAAGCTTATTAAGATGATGTTTCATTTTTTGATATATGAATTTGATGTCTGACCAATATTCCGTTTGAATCTCGACTTTCAAATCCACAATTCTAAATGGAGCCTTGGGTTATTGTGCGGTGAGATGGTATTACACATTATAAATGTTGGCATTACTGAGAACACATAAAAGCATTTAACTTTGTTAACCTCAGTTTTTCGTTACTTTCCGTTGACTTATGTGGCACATAATGTGTCAGAGCTGACTATTTGTGTCGGGTACGTCAAATATATTAGGCACTAAAATGATTGTTGTAAGGTTTTCAAGGAGATGAAATGTTTGTCTTCAGTTGTGTTCTCAAATATTCAATCTTAAACTGTTTCGTGTAGAGGCTATTTGAGTTTCATTTCTATGTCCCTCACAGCATGAAAATAAGATTCTCTTTGGTTAAATAAATGCTCTGCAGTATGTTTACGTTCTTCTGTCAATCATGCAGGATAGGAGGCTTCTTGCTTCGGCCAGTGATGATGGGACTGTGAAGATATGGGAGTTGGTTCGTCTCTCTGGACAGAAGTTGCTGTGAACATAGCTTCACAGCGGATATTAGAAAGCAATGCACATCATTTTCCGATGTAGAAACGTAATTTACAGTCATTTCGAGCCTTTATGAAGTCTTCCAGAAAATGTTAGCTTTAGAAATGTGTTTGGAACAAAGTGTTAGCTTTAGGCTTTAGAACTGGGTGTGGAACACACATATTGAGATATTGACATGTTGAGAACCTCCAGCATTTATAAGTTTGTTTTTGAAAAATATATTGTAATGAGTAAAGAAGATATTTGGAATTCT</genome_strand>
        <mrna_strand>CCATGGGGATCCGATTCGATGCTAGTGGAGACAAAATGGTTTCTTGCAG.....................................................................................................................TGATGACCTTACCATTAAGGTATGGACTAGCAAAATGCAGGAAGGGGATCAAAATGCACCTTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACATGTCTGCACCCTATCTGGATATCATGATAGGACAATTTTCTCAGTTCATTGGTCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAGGAATAATTGCTAGTGGAGCAGCTGATGACGCTATATGTTTATTTGTTGAGAATAATGACAATGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGGGACCTTCATTTAAACTACTTCTGAAGAAAGAGAAGGCTCATGAAATGGATGTAAATTCTGTGCAATGGAACTCTGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAGGAGGCTTCTTGCTTCGGCCAGTGATGATGGGACTGTGAAGATATGGGAGTTGGTTCGTCTCTCTGGACAGAAGTTGCTGTGAACATAGCTTCACAGCGGATATTAGAAAGCAATGCACATCATTTTCCGATGTAGAAACGTAATTTACAGTCATTTCGAGCCTTTATGAAGTCTTCCAGAAAATGTTAGCTTTAGAAATGTGTTTGGAACAAAGTGTTAGCTTTAGGCTTTAGAACTGGGTGTGGAACACACATATTGAGATATTGACATGTTGAGAACCTCCAGCATTTATAAGTTTGTTTTTGAAAAATATATTGTAATGAGTAAAGAAGATATTTGGAATTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E357796" ref_strand="+" ref_description="SGN-E357796 [cTOS-24-K11]">
      <seq>aaagagaaggctcatgaaatggatgtaaattctgtgcaatggaactctggggataggaggcttcttgcttcggccagtgatgatgggactgtgaagatatgggagttggttcgtctctctggacagaagttgctgtgaacatagcttcacagcggatattagaaagcaatgcacatcattttccgatgtagaaacgtaatttacagtcatttcgagcctttatgaagtcttccagaaaatgttagctttagaaatgtgtttggaacaaagtgttagctttaggctttagaactgggtgtggaacacacatattgagatattgacatgttgagaacctccagcatttataagtttgtttttgaaaaatatattgtaatgagtaaagaagatatttggaattctcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="+" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="91631" stop="93444"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91931" g_stop="91981" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="51" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91982" i_stop="92784" i_length="803">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92785" g_stop="93145" g_length="361"/>
          <reference_exon_boundary r_type="cDNA" r_start="52" r_stop="412" r_length="361" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="+" ref_id="SGN-E357796" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>412</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E357796" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91931" e_stop="91981"/>
          <exon e_start="92785" e_stop="93145"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGAGAAGGCTCATGAAATGGATGTAAATTCTGTGCAATGGAACTCTGGGGTAAGTCAATGGGGTACCAGACTCAGATTTTTGACATTTACTTGTTCATCTGTTGTTGCTTTGACTCTGTATTAGTCTCTGCTGCAAGATGATTTATTTTTTAGTAGAAGCCAAGATCACCTGAAAATTTCTTCAGCTTGTTAGGGCTGATAATCTGTTACCCATTCAATCCCTTGTTTAATTGCCACGTTGAAGTGTAACTAGTGTCTGACCTTTCCAACGTATCTTGGATTGGCGCTTGATGATGCAGTAATCTGCTTGTTTCGTATAGCAGTCTTACTGTGGATAAGACGAGTGGCACCTAAATTCGGACATGCTAGATTGAGAAAAGCTTATTAAGATGATGTTTCATTTTTTGATATATGAATTTGATGTCTGACCAATATTCCGTTTGAATCTCGACTTTCAAATCCACAATTCTAAATGGAGCCTTGGGTTATTGTGCGGTGAGATGGTATTACACATTATAAATGTTGGCATTACTGAGAACACATAAAAGCATTTAACTTTGTTAACCTCAGTTTTTCGTTACTTTCCGTTGACTTATGTGGCACATAATGTGTCAGAGCTGACTATTTGTGTCGGGTACGTCAAATATATTAGGCACTAAAATGATTGTTGTAAGGTTTTCAAGGAGATGAAATGTTTGTCTTCAGTTGTGTTCTCAAATATTCAATCTTAAACTGTTTCGTGTAGAGGCTATTTGAGTTTCATTTCTATGTCCCTCACAGCATGAAAATAAGATTCTCTTTGGTTAAATAAATGCTCTGCAGTATGTTTACGTTCTTCTGTCAATCATGCAGGATAGGAGGCTTCTTGCTTCGGCCAGTGATGATGGGACTGTGAAGATATGGGAGTTGGTTCGTCTCTCTGGACAGAAGTTGCTGTGAACATAGCTTCACAGCGGATATTAGAAAGCAATGCACATCATTTTCCGATGTAGAAACGTAATTTACAGTCATTTCGAGCCTTTATGAAGTCTTCCAGAAAATGTTAGCTTTAGAAATGTGTTTGGAACAAAGTGTTAGCTTTAGGCTTTAGAACTGGGTGTGGAACACACATATTGAGATATTGACATGTTGAGAACCTCCAGCATTTATAAGTTTGTTTTTGAAAAATATATTGTAATGAGTAAAGAAGATATTTGGAATTCTCAATTAATAG</genome_strand>
        <mrna_strand>AAAGAGAAGGCTCATGAAATGGATGTAAATTCTGTGCAATGGAACTCTGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAGGAGGCTTCTTGCTTCGGCCAGTGATGATGGGACTGTGAAGATATGGGAGTTGGTTCGTCTCTCTGGACAGAAGTTGCTGTGAACATAGCTTCACAGCGGATATTAGAAAGCAATGCACATCATTTTCCGATGTAGAAACGTAATTTACAGTCATTTCGAGCCTTTATGAAGTCTTCCAGAAAATGTTAGCTTTAGAAATGTGTTTGGAACAAAGTGTTAGCTTTAGGCTTTAGAACTGGGTGTGGAACACACATATTGAGATATTGACATGTTGAGAACCTCCAGCATTTATAAGTTTGTTTTTGAAAAATATATTGTAATGAGTAAAGAAGATATTTGGAATTCTCAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E691072" ref_strand="+" ref_description="SGN-E691072 [LH_Ea05C14]">
      <seq>ccgtatatatccaccgtcggagagattcaacaatgaaaatagcatagcatattcaccaacggggagattcagcagtgaacctgaaagagcatatccacgattccacactgaaagtgaaagagcatatccaccaacgtggagattaaacagtgaaaatgaaagagcatatccaccatatgctcctcaattaccaccagactacggcttgaaatatcaccatgttggggatgagcctaggtacccagctttagtctcatctcgctattcccttagggaaccatctgcacctcgtcgctgaacttctgctatctgcatccctcaaatatcttccatggctttggtaaagttatgcttatgaaactgatgaacttttggcctagttcagcgacaaggaacttgcatttctaagatgtgctgagggcaaagataaggtcaactatacatgtcttctctgatgggctctgtattataaatattacagtattccccattttcttcctgtacaaggggagaagcgtaatacctgaatcttgacacctcttttgtgttgtttcttatatttattatttgtgacatgaaggagaaacttgatgttgttgatttatttcatgaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="+" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="114910" stop="116121"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115204" g_stop="115829" g_length="626"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="621" r_length="621" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="+" ref_id="SGN-E691072" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>626</cumulative_length_of_scored_exons>
        <coverage percentage="1.008" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E691072" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115204" e_stop="115829"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAGCATATCCACCGACGGAGAGATTCAACAGTGAAAATAGAAGAGCATATTCACCAACGGGGAGATTCAGCAGTGAACCTGAAAGAGCATATCCACCAACGGTGAGATTCCACACTGAAAGTGAAAGAGCATATCCACCAACGTGGAGATTAAACAGTGAAAATGAAAGAGCATATCCACCATATGCTCCTCAATTACCACCAGACTACGGCTTGAAATATCACCATGTTGGGGATGAGCCTAGGTACCCAACTTTAGTCTCATCTCGCTATTCCCTTAGGGAACCTTCTGCACCTCGTCGCTGAACTTCTGCTATCTGCATCCCTCAAATATCTTCCATGGC-TT-GTAAAGTTATGCTTTTGAAACTGATGAACTTTAGGCCTAATTCATCGACAAGGAACTTGCATTTCTAAGAGGTGCTGAGGGCAAAGATAAGGTCAACTATACATGTCTTCTCTGATGGGCTCTGGATTATAAATATTACAGTATTCCCCATTTTCTTCCTGTACAAGGGGAGAAACGTAATACCTGAATCTTGACACCTCT--TGTGTTGTTTCTTATATTTATTATTTGTAACATAAAGGAGAAACTTGATGTTGTTGATTTATTTCATGCATTCTGATG</genome_strand>
        <mrna_strand>CCGTATATATCCACCGTCGGAGAGATTCAACAATGAAAATAGCATAGCATATTCACCAACGGGGAGATTCAGCAGTGAACCTGAAAGAGCATAT---CC-AC-G----ATTCCACACTGAAAGTGAAAGAGCATATCCACCAACGTGGAGATTAAACAGTGAAAATGAAAGAGCATATCCACCATATGCTCCTCAATTACCACCAGACTACGGCTTGAAATATCACCATGTTGGGGATGAGCCTAGGTACCCAGCTTTAGTCTCATCTCGCTATTCCCTTAGGGAACCATCTGCACCTCGTCGCTGAACTTCTGCTATCTGCATCCCTCAAATATCTTCCATGGCTTTGGTAAAGTTATGCTTATGAAACTGATGAACTTTTGGCCTAGTTCAGCGACAAGGAACTTGCATTTCTAAGATGTGCTGAGGGCAAAGATAAGGTCAACTATACATGTCTTCTCTGATGGGCTCTGTATTATAAATATTACAGTATTCCCCATTTTCTTCCTGTACAAGGGGAGAAGCGTAATACCTGAATCTTGACACCTCTTTTGTGTTGTTTCTTATATTTATTATTTGTGACATGAAGGAGAAACTTGATGTTGTTGATTTATTTCATGAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E691071" ref_strand="+" ref_description="SGN-E691071 [LH_Ea05C13]">
      <seq>cagtgtagcatatccaccgtcggagagattcaacaatgaaaatagaagagcatattcaccaacggggagattcagcagtgaacctgaaagagcatatccacgattccacactgaaagtgaaagagcatatccaccaacgtggagattaaacagtgaaaatgaaagagcatatccaccatatgctcctcaattaccaccagactacggcttgaaatatcaccatgttggggatgagcctaggtacccagctttagtctcatctcgctattcccttagggaaccatctgcacctcgtcgctgaacttctgctatctgcatccctcaaatatcttccatggctttggtaaagttatgcttatgaaactgatgaacttttggcctagttcagcgacaaggaacttgcatttctaagatgtgctgagggcaaagataaggtcaactatacatgtcttctctgatgggctctgtattataaatattacagtattccccattttcttcctgtacaaggggagaagcgtaatacctgaatcttgacacctcttttgtgttgtttcttatatttattatttgtgacatgaaggagaaacttgatgttgttgatttatttcatgaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="+" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="114907" stop="116121"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115207" g_stop="115829" g_length="623"/>
          <reference_exon_boundary r_type="cDNA" r_start="7" r_stop="624" r_length="618" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="+" ref_id="SGN-E691071" ref_strand="+">
        <total_alignment_score>0.939</total_alignment_score>
        <cumulative_length_of_scored_exons>623</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E691071" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115207" e_stop="115829"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCATATCCACCGACGGAGAGATTCAACAGTGAAAATAGAAGAGCATATTCACCAACGGGGAGATTCAGCAGTGAACCTGAAAGAGCATATCCACCAACGGTGAGATTCCACACTGAAAGTGAAAGAGCATATCCACCAACGTGGAGATTAAACAGTGAAAATGAAAGAGCATATCCACCATATGCTCCTCAATTACCACCAGACTACGGCTTGAAATATCACCATGTTGGGGATGAGCCTAGGTACCCAACTTTAGTCTCATCTCGCTATTCCCTTAGGGAACCTTCTGCACCTCGTCGCTGAACTTCTGCTATCTGCATCCCTCAAATATCTTCCATGGC-TT-GTAAAGTTATGCTTTTGAAACTGATGAACTTTAGGCCTAATTCATCGACAAGGAACTTGCATTTCTAAGAGGTGCTGAGGGCAAAGATAAGGTCAACTATACATGTCTTCTCTGATGGGCTCTGGATTATAAATATTACAGTATTCCCCATTTTCTTCCTGTACAAGGGGAGAAACGTAATACCTGAATCTTGACACCTCT--TGTGTTGTTTCTTATATTTATTATTTGTAACATAAAGGAGAAACTTGATGTTGTTGATTTATTTCATGCATTCTGATG</genome_strand>
        <mrna_strand>AGCATATCCACCGTCGGAGAGATTCAACAATGAAAATAGAAGAGCATATTCACCAACGGGGAGATTCAGCAGTGAACCTGAAAGAGCATAT---CC-AC---G--ATTCCACACTGAAAGTGAAAGAGCATATCCACCAACGTGGAGATTAAACAGTGAAAATGAAAGAGCATATCCACCATATGCTCCTCAATTACCACCAGACTACGGCTTGAAATATCACCATGTTGGGGATGAGCCTAGGTACCCAGCTTTAGTCTCATCTCGCTATTCCCTTAGGGAACCATCTGCACCTCGTCGCTGAACTTCTGCTATCTGCATCCCTCAAATATCTTCCATGGCTTTGGTAAAGTTATGCTTATGAAACTGATGAACTTTTGGCCTAGTTCAGCGACAAGGAACTTGCATTTCTAAGATGTGCTGAGGGCAAAGATAAGGTCAACTATACATGTCTTCTCTGATGGGCTCTGTATTATAAATATTACAGTATTCCCCATTTTCTTCCTGTACAAGGGGAGAAGCGTAATACCTGAATCTTGACACCTCTTTTGTGTTGTTTCTTATATTTATTATTTGTGACATGAAGGAGAAACTTGATGTTGTTGATTTATTTCATGAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E694912" ref_strand="+" ref_description="SGN-E694912 [LH_Ea05C14](-)">
      <seq>agcatatccaccgtcggagagattcaacaatgaaaatggaagagcatattcaccaacggggagattcagcagtgaacctgaaagagcatatccacgattccacactgaaagtgaaagagcatatccaccaacgtggagattaaacagtgaaaatgaaagagcatatcccccatatgctcctcaattaccaccagaatacggcttgaaatatcaccatgttggggatgagcctaggtacccagctttagtctcatctcgctattcccttagggaaccatttgcacctcgtcgctgaacttgtgctatctgcatccctcaaatatcttccatggctttggtaaagttatgcttatgaaactgatgaacttttggcctagttcagcgacaaggaacttgcatttataagatgtgctgagggcaaagataaggtcaactatacatgtcttgtgtgaagggttttgtattataaatattacagtattccccatttttttcctgtacaaggggagaagcgtaatacctgaatcttgaaagctcttttgtgttgtttcttatatttattatttgttacaaaggggagaaacttgacgttgttgattatttcagaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="+" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="114907" stop="116121"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115207" g_stop="115816" g_length="610"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="604" r_length="604" r_score="0.921"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="605" polyA_stop="620"/>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="+" ref_id="SGN-E694912" ref_strand="+">
        <total_alignment_score>0.921</total_alignment_score>
        <cumulative_length_of_scored_exons>610</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E694912" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115207" e_stop="115816"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCATATCCACCGACGGAGAGATTCAACAGTGAAAATAGAAGAGCATATTCACCAACGGGGAGATTCAGCAGTGAACCTGAAAGAGCATATCCACCAACGGTGAGATTCCACACTGAAAGTGAAAGAGCATATCCACCAACGTGGAGATTAAACAGTGAAAATGAAAGAGCATATCCACCATATGCTCCTCAATTACCACCAGACTACGGCTTGAAATATCACCATGTTGGGGATGAGCCTAGGTACCCAACTTTAGTCTCATCTCGCTATTCCCTTAGGGAACCTTCTGCACCTCGTCGCTGAACTTCTGCTATCTGCATCCCTCAAATATCTTCCATGGC-TT-GTAAAGTTATGCTTTTGAAACTGATGAACTTTAGGCCTAATTCATCGACAAGGAACTTGCATTTCTAAGAGGTGCTGAGGGCAAAGATAAGGTCAACTATACATGTCTTCTCTGATGGGCTCTGGATTATAAATATTACAGTATTCCCCATTTTCTTCCTGTACAAGGGGAGAAACGTAATACCTGAATCTTGACACCTC-TT-GTGTTGTTTCTTATATTTATTATTTGTAACATAAAGGAGAAACTTGATGTTGTTGATTTATTTC</genome_strand>
        <mrna_strand>AGCATATCCACCGTCGGAGAGATTCAACAATGAAAATGGAAGAGCATATTCACCAACGGGGAGATTCAGCAGTGAACCTGAAAGAGCATAT---CC-AC---G--ATTCCACACTGAAAGTGAAAGAGCATATCCACCAACGTGGAGATTAAACAGTGAAAATGAAAGAGCATATCCCCCATATGCTCCTCAATTACCACCAGAATACGGCTTGAAATATCACCATGTTGGGGATGAGCCTAGGTACCCAGCTTTAGTCTCATCTCGCTATTCCCTTAGGGAACCATTTGCACCTCGTCGCTGAACTTGTGCTATCTGCATCCCTCAAATATCTTCCATGGCTTTGGTAAAGTTATGCTTATGAAACTGATGAACTTTTGGCCTAGTTCAGCGACAAGGAACTTGCATTTATAAGATGTGCTGAGGGCAAAGATAAGGTCAACTATACATGTCTTGTGTGAAGGGTTTTGTATTATAAATATTACAGTATTCCCCATTTTTTTCCTGTACAAGGGGAGAAGCGTAATACCTGAATCTTGAAAGCTCTTTTGTGTTGTTTCTTATATTTATTATTTGTTACAAAGGGGAGAAACTTGACGTTGTTGA-TTATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E694911" ref_strand="+" ref_description="SGN-E694911 [LH_Ea05C13](-)">
      <seq>agcatatccaccgtcggagagattcaacaatgaaaatagaagagcatattcaccaacggggagattcagcagtgaacctgaaagagcatatccacgattccacactgaaagtgaaagagcatatccaccaacgtggagattaaacagtgaaaatgaaagagcatatccaccatatgctcctcaattaccaccagactacggcttgaaatatcaccatgttggggatgagcctaggtacccagctttagtctcatctcgctattcccttagggaaccatctgcacctcgtcgctgaacttctgctatctgcatccctcaaatatcttccatggctttggtaaagttatgcttatgaaactgatgaacttttggcctagttcagcgacaaggaacttgcatttctaagatgtgctgagggcaaagataaggtcaactatacatgtcttctctgatgggctctgtattataaatattacagtattccccattttcttcctgtacaaggggagaagcgtaatacctgaatcttgacgcctcttttgtgttgtttcttatatttattatttgtgacaagagggagaaacttgatgttgttgattatttcagaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="+" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="114907" stop="116121"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115207" g_stop="115816" g_length="610"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="604" r_length="604" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="605" polyA_stop="617"/>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="+" ref_id="SGN-E694911" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>610</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E694911" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115207" e_stop="115816"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCATATCCACCGACGGAGAGATTCAACAGTGAAAATAGAAGAGCATATTCACCAACGGGGAGATTCAGCAGTGAACCTGAAAGAGCATATCCACCAACGGTGAGATTCCACACTGAAAGTGAAAGAGCATATCCACCAACGTGGAGATTAAACAGTGAAAATGAAAGAGCATATCCACCATATGCTCCTCAATTACCACCAGACTACGGCTTGAAATATCACCATGTTGGGGATGAGCCTAGGTACCCAACTTTAGTCTCATCTCGCTATTCCCTTAGGGAACCTTCTGCACCTCGTCGCTGAACTTCTGCTATCTGCATCCCTCAAATATCTTCCATGGC-TT-GTAAAGTTATGCTTTTGAAACTGATGAACTTTAGGCCTAATTCATCGACAAGGAACTTGCATTTCTAAGAGGTGCTGAGGGCAAAGATAAGGTCAACTATACATGTCTTCTCTGATGGGCTCTGGATTATAAATATTACAGTATTCCCCATTTTCTTCCTGTACAAGGGGAGAAACGTAATACCTGAATCTTGACACCTC--TTGTGTTGTTTCTTATATTTATTATTTGTAACATAAAGGAGAAACTTGATGTTGTTGATTTATTTC</genome_strand>
        <mrna_strand>AGCATATCCACCGTCGGAGAGATTCAACAATGAAAATAGAAGAGCATATTCACCAACGGGGAGATTCAGCAGTGAACCTGAAAGAGCATAT---CC-AC-----GATTCCACACTGAAAGTGAAAGAGCATATCCACCAACGTGGAGATTAAACAGTGAAAATGAAAGAGCATATCCACCATATGCTCCTCAATTACCACCAGACTACGGCTTGAAATATCACCATGTTGGGGATGAGCCTAGGTACCCAGCTTTAGTCTCATCTCGCTATTCCCTTAGGGAACCATCTGCACCTCGTCGCTGAACTTCTGCTATCTGCATCCCTCAAATATCTTCCATGGCTTTGGTAAAGTTATGCTTATGAAACTGATGAACTTTTGGCCTAGTTCAGCGACAAGGAACTTGCATTTCTAAGATGTGCTGAGGGCAAAGATAAGGTCAACTATACATGTCTTCTCTGATGGGCTCTGTATTATAAATATTACAGTATTCCCCATTTTCTTCCTGTACAAGGGGAGAAGCGTAATACCTGAATCTTGACGCCTCTTTTGTGTTGTTTCTTATATTTATTATTTGTGACAAGAGGGAGAAACTTGATGTTGTTGA-TTATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E331496" ref_strand="+" ref_description="SGN-E331496 [cTOD-9-A24]">
      <seq>ggataatcaagaatggccggcgaatcgacgccggctaccgggaaaactctcccttcaggatccatggaggtgagggagagacgaaaatggggtgtttcagcctcagaggctgtgtcccattttggtacaagtggaatgtctgttgctgctgcaactgcaatcactcatcctttagatgttttgaaagttagattgcagatgcaacttgttggtcagagagggcctttggtcggaattgggaggctttctcttcaagtagttgaaagcgaaggactgaaatccttgtatctgggattggcaccttcattgatgaggtcagttctttatggtggtctccgtttaggattatacgaaccgtcaaaatatctctgtgaattggcttttgagtccaccaatatcttggtgaagattgcatctggagcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="+" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="116430" stop="118889"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116730" g_stop="116787" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="58" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="116788" i_stop="116952" i_length="165">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="116953" g_stop="117069" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="175" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="117070" i_stop="118224" i_length="1155">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="118225" g_stop="118286" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="237" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="118287" i_stop="118402" i_length="116">
            <donor d_prob="0.406" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="118403" g_stop="118589" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="424" r_length="187" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="+" ref_id="SGN-E331496" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>424</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E331496" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116730" e_stop="116787"/>
          <exon e_start="116953" e_stop="117069"/>
          <exon e_start="118225" e_stop="118286"/>
          <exon e_start="118403" e_stop="118589"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATAATCAAGAATGGCCGGCGAATCGACGCCGGCTACCGGGAAAACTCTCCCTTCAGGTTTGTGATTGAACCCCATTTCTATATACCCATTTAATATGTTGGGTTATCCATCAAAATTTGATTTTTATTTTTTTTTGGTTCAGAATAAGCATAGTTTGTTGTATGGGGAAATTTTTATTTTTTATTTTTATGAATTCTGATTTGGGTTCTTATTTTCCTCAGGATCCATGGAGGTGAGGGAGAGACGAAAATGGGGTGTTTCAGCCTCAGAGGCTGTGTCCCATTTTGGTACAAGTGGAATGTCTGTTGCTGCTGCAACTGCAATCACTCATCCTTTAGGTTCTTTCTTCACTTAATTTTATGCTTATTTATTGAATTTGGAAGTAATTTTGTTGCTTTGAGCTTGAAAGTAAAGGGTGGTATAAAGGAGAAAACTTTTTAGATGCAAATGTTGCCTAGCATTTTATTGATAGTGAGAAAATGATTTTTGGTTAGTTTTTGAAGATGAGTATCTCAAATTTGAAAAAATAATTTGTGAAGTCCAAATCGTAAAATTTTGAACTTTGTTTCAAGTGAAATGCTTGTTGAAACATGACTTCAACTTCAAATACTACTGCTTTTCTTTATCTCATATAACCAAAAAATGTTTATCTTGATATTTTGCTGCCGGCTTTTTCCTCTCTATCATGCTTTATTGCATTTGTTTTGAGCTGAGGTTTTACGGGAAACTACCTCTCTATCCCTCAAAGGTAGGGGTAAGGTTTGCGTACATCCTACCCTCCGCATACCCCACTTGCAGGATGGCGCTAGGTATGCTGTTGTTGTAAATACTACTTTTCTTATAAATACTCAATTTATGTCCAAGCAACTCCTTTGAATCAGCTATCACTTTGATTTTGCTTGACCAATTTAGTTGTAGAAAGTAATCCTTTGTTGCAACTAGACAAGACCAGATAAAATCAAATAGTACCGATCTATTGATGATGTGACTTCGGAGTTGCATAATGTAGTGCCACCCAAGAGGGTGAGAGAGAAGTTCAAAAAAGATTTTGGGTATTAAGTTGAAAGTCCTGTATTTTACTCGGGTGGTTTGTCATTCAATGTAATGACCTCTCCTTTAAAGAAGGAGAAAGAGAGTTCCCAATCACTGTTTATTTTTCTCATATAATTATTTAAAGTTCATGAGTTCTATATGATCACTACTTATTCTCAAAAACAAAGAGTTCTATATGATCACTACGCTTCTTAAGAATGTGCAAAGGGGACAAGCATTCAATTTTGGTGAACTAACTACATGAATGCCCTACGTTATCATATGTTGTTCCATGTACTTGAGTCTTTATAACTTTAATTGGAAGAGCAAAAACTGCAAGGATATGGAAGGAATGGGTGCACAACCTAATTCCTCCTCTCTCCACCCTGATTGTAGTTAGTTTTCAGTGAAAGGCGGTCTTGTACTAAATAAAGATGCATGATTGTGCTTATTGTGTGCAGATGTTTTGAAAGTTAGATTGCAGATGCAACTTGTTGGTCAGAGAGGGCCTTTGGTCGGAATTGTATGGCAGGAAGCTTAGGCTTTTACCTTTTATATCCCTTTTTATTATAGCTTAGAAAGATATATCTTGGTTAATAGCTGCACCTTATGTGATTTTTCCCATTGCATTGGTGTTAGGGGAGGCTTTCTCTTCAAGTAGTTGAAAGCGAAGGACTGAAATCCTTGTATCTGGGATTGGCACCTTCATTGATGAGGTCAGTTCTTTATGGTGGTCTCCGTTTAGGATTATACGAACCGTCAAAATATCTCTGTGAATTGGCTTTTGAGTCCACCAATATCTTGGTGAAGATTGCATCTGGAGCAT</genome_strand>
        <mrna_strand>GGATAATCAAGAATGGCCGGCGAATCGACGCCGGCTACCGGGAAAACTCTCCCTTCAG.....................................................................................................................................................................GATCCATGGAGGTGAGGGAGAGACGAAAATGGGGTGTTTCAGCCTCAGAGGCTGTGTCCCATTTTGGTACAAGTGGAATGTCTGTTGCTGCTGCAACTGCAATCACTCATCCTTTAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTTTGAAAGTTAGATTGCAGATGCAACTTGTTGGTCAGAGAGGGCCTTTGGTCGGAATT....................................................................................................................GGGAGGCTTTCTCTTCAAGTAGTTGAAAGCGAAGGACTGAAATCCTTGTATCTGGGATTGGCACCTTCATTGATGAGGTCAGTTCTTTATGGTGGTCTCCGTTTAGGATTATACGAACCGTCAAAATATCTCTGTGAATTGGCTTTTGAGTCCACCAATATCTTGGTGAAGATTGCATCTGGAGCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E338918" ref_strand="+" ref_description="SGN-E338918 [cTOE-21-B2]">
      <seq>ccaactttgccatctaaaaatcccctaattttccgaaatcagcgaagacccggcgcagaagaagaagaaaatatacagaaaaattgaagagatcgacagagttgtcgaagacttttagagagagaaagtgtgtttgtgagtgagagagagtgtgtgggttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="+" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="121646" stop="122406"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121946" g_stop="122106" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="161" r_length="161" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="+" ref_id="SGN-E338918" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>161</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E338918" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121946" e_stop="122106"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAACTTTGCCATCTAAAAATCCCCTAATTTTCCGAAATCAGCGAAGACCCGGCGCAGAAGAAGAAGAAAATATACAGAAAAATTGAAGAGATCGACAGAGTTGTCGAAGACTTTTAGAGAGAGAAAGTGTGTTTGTGAGTGAGAGAGAGTGTGTGGGTTG</genome_strand>
        <mrna_strand>CCAACTTTGCCATCTAAAAATCCCCTAATTTTCCGAAATCAGCGAAGACCCGGCGCAGAAGAAGAAGAAAATATACAGAAAAATTGAAGAGATCGACAGAGTTGTCGAAGACTTTTAGAGAGAGAAAGTGTGTTTGTGAGTGAGAGAGAGTGTGTGGGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E698831" ref_strand="+" ref_description="SGN-E698831 [FA07DA01]">
      <seq>caaagacaaaactacgcgtgcttctcgaggctgttgttttgtgatctgtccatctagagaagaagcggataaggcagttaatgcatgccacaacaaaaagacgctttccggggcttctagtccgttgcaagtgaagtatgctgatggcgagttggaaagactagagcacaagctttttgttggtatgcttccaaagaatgtctctgatcctgaagtatctgccttgttctctcaatatggagtcattaaagatttgcagattctcagaggttctcagcaaaccagtaaaggatgtgcttttctgaagtatgagaaaaaagaacaagcagttgcagcaatagatgccctccatggaaagcataagatggagggtgctactgtccctttggtagtcaagtgggcagatactgaaaaggaaaggcaggcccggagggctcagaaatctctatctcatgcttccgactctagacagcatccctctttgtttggagccctacctatgggttacatgccaccatacaatggctatggctatcagactcctggggcatatgggctcatgcagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="+" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="122145" stop="127882"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="122276" g_stop="122304" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="29" r_length="29" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="122305" i_stop="122471" i_length="167">
            <donor d_prob="0.959" d_score="0.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="122472" g_stop="122554" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="30" r_stop="112" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="122555" i_stop="124342" i_length="1788">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="124343" g_stop="124394" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="113" r_stop="164" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="124395" i_stop="124590" i_length="196">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="124591" g_stop="124716" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="165" r_stop="290" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="124717" i_stop="124801" i_length="85">
            <donor d_prob="0.862" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="124802" g_stop="124881" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="370" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="124882" i_stop="127088" i_length="2207">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.761" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="127089" g_stop="127256" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="371" r_stop="538" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="127257" i_stop="127554" i_length="298">
            <donor d_prob="0.936" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="127555" g_stop="127582" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="539" r_stop="566" r_length="28" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="+" ref_id="SGN-E698831" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>566</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E698831" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="122276" e_stop="122304"/>
          <exon e_start="122472" e_stop="122554"/>
          <exon e_start="124343" e_stop="124394"/>
          <exon e_start="124591" e_stop="124716"/>
          <exon e_start="124802" e_stop="124881"/>
          <exon e_start="127089" e_stop="127256"/>
          <exon e_start="127555" e_stop="127582"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAGACAAAACTACGCGTGCTTCTCGAGGTTCTCAAATTTATGTCACTCACTTCCTCTATCACTACTTCTCCGCCTGATTTCTGGATCGACAAATGTGCAATTGCAGCAATATGTTTTAAATTACGTTTACTTTGAGATTTGTACTCTCTAGATGCGTGATTACAGTCTTCAAACCCTAATTTTGCTGTTTTCAGGCTGTTGTTTTGTGATCTGTCCATCTAGAGAAGAAGCGGATAAGGCAGTTAATGCATGCCACAACAAAAAGACGCTTTCCGGGGTTAGTTTTCTTCTTTTTTTATATAATCATTCAGTACATACATTACCTTTTTTGCTTAATTAATTGAAGTAGATTTGCATTACAGTAATGTACCTTAATTAGTTAAAGAATTTTATTTTTTGTTACTTATATGCCGTGTAATCTCTGCATTGTTGATGTAAAAAACTGAACTTTTGATAATTGAGGATCTTTTCATCTCTGATTTTTGTGATGCGATGCCATGGAACTTCTGAGTTGTTCTCTAATTCTCTGCTTTCGATAATTAATTACCTCATTTTCCATGTTGTATAAACTATTACTAATTTTGTGCTTGTTCAAGTCTTTTGTACAATATTCTGAGACATAAAGTTTTTATTATATCTGACCCGTAATTGTTGATTTGACAGTTTGAGGTTGATCATGGCTGTGAAATTCAATTGTTTGACTATATATTTCAGAGGAATCTTATGGAATTTTCTGTCTTTCAACTTTCAGCTCGTAGAATGTAGGACCATCTGTTCTGTTATGGCACTATAAATGTCAAGTGATTGGACAACAAAAATCATAACATCATGGATGTAAAATACTCTCCATTGAGAAATTGTGACTTGACAGGACGTTCTGTGAGAAAAGGTTTTTTGGAATCTAGTGCAAATTGCTTTAACTCCTGAACTCTAGTAGGGAAGCAGATTACTTTTTTGAGGCTTAAGTCCTTCCCAGACTCCCAGTTGGGAGTGGGCATTATCAAGATTTGAATTCCGAGATCAAGCTTCACTGTGTTTCATTTGATATTTCCAAATAGTGGAAACTAGAAAAGAAGATGAGTGGTCAGTATTAACCAACTAAAATAACTTGCTCAGTATTTTGTACGACAAAATCTGCATGGGGAAAAATTTCTCCACAGTTTTTAGTTATAAATACAGCACCTGAGAATCTTACCAGTTTCAAAAAAAAGCGCCTCAGAATGAAGCAGCTGACTTACTGAGAGTACAGTGGCAGCTGTAAGAATTATTAGCAATACATATCAGGGGAGAAATAAGAATTGTATTGAGAAATTTGAACCGAGATAAGGATGAAGTATTTGGATATTACTTGACCTACCACCATCTGGGGTGTTGTATGGAAGGTGTGGCCCCTGTTCAAGTAAAAAGAAAGATATAGGGCTGCATAGGTTGATCTAATATGGATCTTATGTTTTTCACCAGTTCTCTGCTTCTTTTTATCTTCTTTTCAGTGAAGAACAAGAAGATATCCAAAAAAGAAAAAGAAAGAATGAGTACTGGAAGTTCTCTTTAGAGTAATCTATTTCTTACAAAGTTTCATGATTGGTTGAATGAACTAATAGAGCAATTAACCCAAATATATAAAGAAGATTGTAGTAGCAGAGTTATCACAGGGCTCTACCATAGAGATACTGATCAGAAGAATCCAAGAATAGTGGAGATAGTAGAGGTGTTTGGCATCTTAGATTGGTCATGAACCTGATTTATTCTAATGCACGTTAGATCCTTATGGTTTCCCACACTAACCTGACTATTAAACTTTATGCATGCCTCTAGTATATTTATCTCCTAACTAAGCATTTGAATTCTTGCATATTGTAGTGAAGTGATAAGTTTCACTGTTTCAATGCTGATCAAAGAAAAGCATTTCATGTATCTAAGTCATCATCTGGTTTTGTGTGGGAGTAGATATCTGTACCCATTAAGCTTGTTAAGGTTACATGTGTCTGCAGTTCTTTTATATCCGTATCACATGTTTGGCTGTATTTTTGTTAATAAGTCATGCTGGTTTCTGTTTCCAATTCAGGCTTCTAGTCCGTTGCAAGTGAAGTATGCTGATGGCGAGTTGGAAAGACTAGGTGTACTATAATTTAAATTCTCTTGTTATCATATTTGTTCTGACCTTTTCATATTTAAAATCCTCTTTTAATCTAAAGTTCTACTCTTACCATTGTCAGCATTATTCTTTTTGTGATTCAAAATAGAATAATAAATAACTTTTCCTCTCTTGTTTTCTTTTTTCTTTCGTTGTTCTTTTCCTTAACCTGATTCCAGAGCACAAGCTTTTTGTTGGTATGCTTCCAAAGAATGTCTCTGATCCTGAAGTATCTGCCTTGTTCTCTCAATATGGAGTCATTAAAGATTTGCAGATTCTCAGAGGTTCTCAGCAAACCAGTAAAGGTATATCTGGTATTACCTCTCTTAAGTTCAATGGTTTTGTGTCGGAGAAATTAATTCATCTCCTACATTATCTTCTTTCTTGAAGGATGTGCTTTTCTGAAGTATGAGAAAAAAGAACAAGCAGTTGCAGCAATAGATGCCCTCCATGGAAAGCATAAGATGGAGGTTTGTTTCAATCTGCAAGTTGACTGCTGATATGAGGCCTTTGAAATTGATTTTTCAGTATGCGTAGTGGCTATAAATGTCCAACATTTGTGCATAAAATGAATAGGATTTTATAAGTGCAGTGGTTTTAGTGTGGGCATTCTTTAAGCAGTTGTTCTGGTGATAGTCCTTCCTCTGGTGTTGTAGAACTTGTTAAACATTCAGGATGGGGATAACCTAATTAATACATTTGTCCTGCTGTCTTTGCAATGTTTGTGTAAGTACTCCTTGCAGGAATAGCATCTGTCATCATGAAAGCACCAATTGTTGTGGCTTTGGATTGGGGTCATTTGTCAATCAGCATTTGTCTGTGATGTGAATGGCTTATTTATGGTCCTGCTAGCAGGGCCAACACAATGGCCTATTTGCTGATATTCGCTGTTCAGAGGAGACATTATCCGGTGATTTTTTTTTCTAGGTCATTTCAACATGGCATTCGTGCTTGGAGTCGTTATGCCTTGAGGCTCTTGACTGAAATAATGAGATTTTGATTGCAATGGTCTGTTCAATTTTGTCTCATGCTCGGGGAATAATATTAAATTATTTTCTTGTTGAAACCGTGAAAGAAAACTTAAGGGCTGTTTGGAAAGCCACCCTGGTTATTGGATTTGGTATAATTGAGTGTATTTACACTGGCGTGTTTGGTTGGCTATGTAATTACTTTATTAGCACGTAACTGATTGCAATTGGCAGGGTTAATTACACTACACTGTGTAATTACAAGTTGATTACTTTTAATTTCTTTTTTTTATGTTTCTTTTTTTTTGTTTTAATTTATTTTTTATTTCTATTATTTTAAATTCTTTTTTTATTTTTATTATTCCAAAAAATTCTAAATGTTTTTGTTTGTTATTATTTATATTTCATTTTCTTCTCATTTTCAACCTTTACTTCATGTGATTCCATTCAATTTCTCGTATTATCTATTTTTTATGCTATGTTTACTTTTTTTTTCCACTAGCATATTTTTGTTAGTATTCTAATTTTTAAATTAAAGTAGAACTCATTGTAGAGTAAAGTTATAGACTTGCATTTTCCTTTTCTTATAAATCAATTTTGTGTACGTTATGTTGAAATATTATCTTTTAATTCATATTTGTATATGTTATGTTCAGTTGCAAGTCATTTATTTTTTAGTTAGAAGGTTATCTTTTTGTTTATTTTAATAATTTATGATATTTAATATTTTTATTTTTGATATAATTTTTTGGTCAAAGATGCATTTATTTATAGACATGTTGTACTTTTTTTTGTTTTTATGATTAATTCAGTGAAATATACTAATTTGAAAAATATAAATCAATTATTTTTTCATGTATTAGTTAAGAACATATATTTATTAATTAGTATATTTTCAAAAGATGATATTTACTTAAATATTTAATTTTGCATCATTTATAAAGTTTCTCATTTGTCTAATATAAATTTTAAATAACTAACTTCATTTTAACTCTAATATAATCTTATGATTGCAATTGTGCATCCAAATGTGTAAATTACACTGTGGCAAAGAAACAGGTTCGTGTAATTACTAGGTTGTGTAATTACCAGACTGGCCATTACCACCCTGGTAATTACATCAATTTCAATTACCAGGTGAATTTCCAAACAGGACCCTTAATTATCATGTTATGAGATTCAGCCTTTATTCCTACAGAGAGCTCATCCATTTAGGGAAATTTTTTATTCACAGCAGTTTGTCAATAGGCGGTATTCTCATCTAAAGTTAATACTGTAAATATTTGGTGGAAAATTTAATTTCGATATTTATGTGAATTTTTAACTTTTGAAATGCATATTTATAAATGTATTGCAGTGTTCCGCCATTTAGTAATTTTATGTGTTATTATGATGCTGGAGTAAGACTGGTTACTGCTATACCATTTGATGCACATGTACACTCTTGGCTGGACTATTTCTAAAATTTGAATACTTCACTAGAAGTTTATTGGAGTCGAGAGCAAGTGATGACATGGATCCATTATATTCATTTCTGTTGCAATTTTCCAATAACCTTACTATGAGACCTTAGTTTGTCTGGTGAACGGGTGCCAAAGCTTATTTAAGTAGATGTGATATTTCTCATTATGCGGCTTTCAAGTTTCACTTATTCATGGCATCCATTTACTGCAATATTGGTTATCAAATTAGTCAACGCTTTTATCCAGGGTGCTACTGTCCCTTTGGTAGTCAAGTGGGCAGATACTGAAAAGGAAAGGCAGGCCCGGAGGGCTCAGAAATCTCTATCTCATGCTTCCGACTCTAGACAGCATCCCTCTTTGTTTGGAGCCCTACCTATGGGTTACATGCCACCATACAATGGCTATGGCTATCAGGTTCATTGACTTGCATTCTCTAGTAAATTTGGTTTTCAAGCTTATTGCTTTGTATTTTGCTCTGAATACTCCTTTTTGTACTTTTTCAGTACCTTCTTGATACTAGTTTTCAGTTTCTTATTACAAAAGTTCTATTTGAATTGACATGCTGCTCTCCTGCAAATTCCAGCAATTATTACAATTTTCAATGTGAATTGAGATGATCATTTACCTTAATTTCATCATTCCTTCCTTTCCCATTCTGGTTTCGTTTATCAATTTAAAGGTCAGTTGCATAGTTAATATACTCACTTTGCAGACTCCTGGGGCATATGGGCTCATGCAGT</genome_strand>
        <mrna_strand>CAAAGACAAAACTACGCGTGCTTCTCGAG.......................................................................................................................................................................GCTGTTGTTTTGTGATCTGTCCATCTAGAGAAGAAGCGGATAAGGCAGTTAATGCATGCCACAACAAAAAGACGCTTTCCGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCTAGTCCGTTGCAAGTGAAGTATGCTGATGGCGAGTTGGAAAGACTAG....................................................................................................................................................................................................AGCACAAGCTTTTTGTTGGTATGCTTCCAAAGAATGTCTCTGATCCTGAAGTATCTGCCTTGTTCTCTCAATATGGAGTCATTAAAGATTTGCAGATTCTCAGAGGTTCTCAGCAAACCAGTAAAG.....................................................................................GATGTGCTTTTCTGAAGTATGAGAAAAAAGAACAAGCAGTTGCAGCAATAGATGCCCTCCATGGAAAGCATAAGATGGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGCTACTGTCCCTTTGGTAGTCAAGTGGGCAGATACTGAAAAGGAAAGGCAGGCCCGGAGGGCTCAGAAATCTCTATCTCATGCTTCCGACTCTAGACAGCATCCCTCTTTGTTTGGAGCCCTACCTATGGGTTACATGCCACCATACAATGGCTATGGCTATCAG..........................................................................................................................................................................................................................................................................................................ACTCCTGGGGCATATGGGCTCATGCAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E281503" ref_strand="-" ref_description="SGN-E281503 [cLEL-1-O22](-)">
      <seq>ggatccaaagaattcggcacgagagatgccctccatggatagcataagatggagggtgctactgtgggtttggtagtcaagtgggcagatatcgaaaaggaaaggcaggcccggagggctcagaaatctctatctcatgcttccgactctagacagcatccctctttgtttggagccctacctatgggttacatgccaccatacaatggctatggctatcagactcctggggcatatgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="+" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="124543" stop="127871"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="124828" g_stop="124881" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="54" r_length="54" r_score="0.722"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="124882" i_stop="127088" i_length="2207">
            <donor d_prob="0.992" d_score="0.76"/>
            <acceptor a_prob="0.761" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="127089" g_stop="127256" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="222" r_length="168" r_score="0.970"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="127257" i_stop="127554" i_length="298">
            <donor d_prob="0.936" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="127555" g_stop="127571" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="239" r_length="17" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="+" ref_id="SGN-E281503" ref_strand="-">
        <total_alignment_score>0.910</total_alignment_score>
        <cumulative_length_of_scored_exons>239</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E281503" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="124828" e_stop="124881"/>
          <exon e_start="127089" e_stop="127256"/>
          <exon e_start="127555" e_stop="127571"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGAACAAGCAGTTGCAGCAATAGATGCCCTCCATGGAAAGCATAAGATGGAGGTTTGTTTCAATCTGCAAGTTGACTGCTGATATGAGGCCTTTGAAATTGATTTTTCAGTATGCGTAGTGGCTATAAATGTCCAACATTTGTGCATAAAATGAATAGGATTTTATAAGTGCAGTGGTTTTAGTGTGGGCATTCTTTAAGCAGTTGTTCTGGTGATAGTCCTTCCTCTGGTGTTGTAGAACTTGTTAAACATTCAGGATGGGGATAACCTAATTAATACATTTGTCCTGCTGTCTTTGCAATGTTTGTGTAAGTACTCCTTGCAGGAATAGCATCTGTCATCATGAAAGCACCAATTGTTGTGGCTTTGGATTGGGGTCATTTGTCAATCAGCATTTGTCTGTGATGTGAATGGCTTATTTATGGTCCTGCTAGCAGGGCCAACACAATGGCCTATTTGCTGATATTCGCTGTTCAGAGGAGACATTATCCGGTGATTTTTTTTTCTAGGTCATTTCAACATGGCATTCGTGCTTGGAGTCGTTATGCCTTGAGGCTCTTGACTGAAATAATGAGATTTTGATTGCAATGGTCTGTTCAATTTTGTCTCATGCTCGGGGAATAATATTAAATTATTTTCTTGTTGAAACCGTGAAAGAAAACTTAAGGGCTGTTTGGAAAGCCACCCTGGTTATTGGATTTGGTATAATTGAGTGTATTTACACTGGCGTGTTTGGTTGGCTATGTAATTACTTTATTAGCACGTAACTGATTGCAATTGGCAGGGTTAATTACACTACACTGTGTAATTACAAGTTGATTACTTTTAATTTCTTTTTTTTATGTTTCTTTTTTTTTGTTTTAATTTATTTTTTATTTCTATTATTTTAAATTCTTTTTTTATTTTTATTATTCCAAAAAATTCTAAATGTTTTTGTTTGTTATTATTTATATTTCATTTTCTTCTCATTTTCAACCTTTACTTCATGTGATTCCATTCAATTTCTCGTATTATCTATTTTTTATGCTATGTTTACTTTTTTTTTCCACTAGCATATTTTTGTTAGTATTCTAATTTTTAAATTAAAGTAGAACTCATTGTAGAGTAAAGTTATAGACTTGCATTTTCCTTTTCTTATAAATCAATTTTGTGTACGTTATGTTGAAATATTATCTTTTAATTCATATTTGTATATGTTATGTTCAGTTGCAAGTCATTTATTTTTTAGTTAGAAGGTTATCTTTTTGTTTATTTTAATAATTTATGATATTTAATATTTTTATTTTTGATATAATTTTTTGGTCAAAGATGCATTTATTTATAGACATGTTGTACTTTTTTTTGTTTTTATGATTAATTCAGTGAAATATACTAATTTGAAAAATATAAATCAATTATTTTTTCATGTATTAGTTAAGAACATATATTTATTAATTAGTATATTTTCAAAAGATGATATTTACTTAAATATTTAATTTTGCATCATTTATAAAGTTTCTCATTTGTCTAATATAAATTTTAAATAACTAACTTCATTTTAACTCTAATATAATCTTATGATTGCAATTGTGCATCCAAATGTGTAAATTACACTGTGGCAAAGAAACAGGTTCGTGTAATTACTAGGTTGTGTAATTACCAGACTGGCCATTACCACCCTGGTAATTACATCAATTTCAATTACCAGGTGAATTTCCAAACAGGACCCTTAATTATCATGTTATGAGATTCAGCCTTTATTCCTACAGAGAGCTCATCCATTTAGGGAAATTTTTTATTCACAGCAGTTTGTCAATAGGCGGTATTCTCATCTAAAGTTAATACTGTAAATATTTGGTGGAAAATTTAATTTCGATATTTATGTGAATTTTTAACTTTTGAAATGCATATTTATAAATGTATTGCAGTGTTCCGCCATTTAGTAATTTTATGTGTTATTATGATGCTGGAGTAAGACTGGTTACTGCTATACCATTTGATGCACATGTACACTCTTGGCTGGACTATTTCTAAAATTTGAATACTTCACTAGAAGTTTATTGGAGTCGAGAGCAAGTGATGACATGGATCCATTATATTCATTTCTGTTGCAATTTTCCAATAACCTTACTATGAGACCTTAGTTTGTCTGGTGAACGGGTGCCAAAGCTTATTTAAGTAGATGTGATATTTCTCATTATGCGGCTTTCAAGTTTCACTTATTCATGGCATCCATTTACTGCAATATTGGTTATCAAATTAGTCAACGCTTTTATCCAGGGTGCTACTGTCCCTTTGGTAGTCAAGTGGGCAGATACTGAAAAGGAAAGGCAGGCCCGGAGGGCTCAGAAATCTCTATCTCATGCTTCCGACTCTAGACAGCATCCCTCTTTGTTTGGAGCCCTACCTATGGGTTACATGCCACCATACAATGGCTATGGCTATCAGGTTCATTGACTTGCATTCTCTAGTAAATTTGGTTTTCAAGCTTATTGCTTTGTATTTTGCTCTGAATACTCCTTTTTGTACTTTTTCAGTACCTTCTTGATACTAGTTTTCAGTTTCTTATTACAAAAGTTCTATTTGAATTGACATGCTGCTCTCCTGCAAATTCCAGCAATTATTACAATTTTCAATGTGAATTGAGATGATCATTTACCTTAATTTCATCATTCCTTCCTTTCCCATTCTGGTTTCGTTTATCAATTTAAAGGTCAGTTGCATAGTTAATATACTCACTTTGCAGACTCCTGGGGCATATGG</genome_strand>
        <mrna_strand>GGATCCAAAGAATTCGGCACGAGAGATGCCCTCCATGGATAGCATAAGATGGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGCTACTGTGGGTTTGGTAGTCAAGTGGGCAGATATCGAAAAGGAAAGGCAGGCCCGGAGGGCTCAGAAATCTCTATCTCATGCTTCCGACTCTAGACAGCATCCCTCTTTGTTTGGAGCCCTACCTATGGGTTACATGCCACCATACAATGGCTATGGCTATCAG..........................................................................................................................................................................................................................................................................................................ACTCCTGGGGCATATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E277743" ref_strand="-" ref_description="SGN-E277743 [cLEL-5-O12](-)">
      <seq>gcacgagagatgccctccatggaaagcataagatggagggtgctactgtccctttggtagtcaagtgggcagatactgaaaaggaaaggcaggcccggagggctcagaaatctctatctcatgcttccgactctagacagcatccctctttgtttggagccctacctatgggttacatgccaccatacaatggctatggctatcagactcctggggcatatgggctcatgcagtatcgtctaccatcaatgcaaaatcagtctgcatttcagaatatagtcccaccaataaaccaagcaagtgctctacgtgggaggtgcaccctgatctttcacctggaatttagtccaagaaattatgccatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="+" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="124543" stop="128011"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="124843" g_stop="124881" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="38" r_length="38" r_score="0.923"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="124882" i_stop="127088" i_length="2207">
            <donor d_prob="0.992" d_score="0.00"/>
            <acceptor a_prob="0.761" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="127089" g_stop="127256" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="39" r_stop="206" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="127257" i_stop="127554" i_length="298">
            <donor d_prob="0.936" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="127555" g_stop="127711" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="366" r_length="160" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="+" ref_id="SGN-E277743" ref_strand="-">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>364</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E277743" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="124843" e_stop="124881"/>
          <exon e_start="127089" e_stop="127256"/>
          <exon e_start="127555" e_stop="127711"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGCAATAGATGCCCTCCATGGAAAGCATAAGATGGAGGTTTGTTTCAATCTGCAAGTTGACTGCTGATATGAGGCCTTTGAAATTGATTTTTCAGTATGCGTAGTGGCTATAAATGTCCAACATTTGTGCATAAAATGAATAGGATTTTATAAGTGCAGTGGTTTTAGTGTGGGCATTCTTTAAGCAGTTGTTCTGGTGATAGTCCTTCCTCTGGTGTTGTAGAACTTGTTAAACATTCAGGATGGGGATAACCTAATTAATACATTTGTCCTGCTGTCTTTGCAATGTTTGTGTAAGTACTCCTTGCAGGAATAGCATCTGTCATCATGAAAGCACCAATTGTTGTGGCTTTGGATTGGGGTCATTTGTCAATCAGCATTTGTCTGTGATGTGAATGGCTTATTTATGGTCCTGCTAGCAGGGCCAACACAATGGCCTATTTGCTGATATTCGCTGTTCAGAGGAGACATTATCCGGTGATTTTTTTTTCTAGGTCATTTCAACATGGCATTCGTGCTTGGAGTCGTTATGCCTTGAGGCTCTTGACTGAAATAATGAGATTTTGATTGCAATGGTCTGTTCAATTTTGTCTCATGCTCGGGGAATAATATTAAATTATTTTCTTGTTGAAACCGTGAAAGAAAACTTAAGGGCTGTTTGGAAAGCCACCCTGGTTATTGGATTTGGTATAATTGAGTGTATTTACACTGGCGTGTTTGGTTGGCTATGTAATTACTTTATTAGCACGTAACTGATTGCAATTGGCAGGGTTAATTACACTACACTGTGTAATTACAAGTTGATTACTTTTAATTTCTTTTTTTTATGTTTCTTTTTTTTTGTTTTAATTTATTTTTTATTTCTATTATTTTAAATTCTTTTTTTATTTTTATTATTCCAAAAAATTCTAAATGTTTTTGTTTGTTATTATTTATATTTCATTTTCTTCTCATTTTCAACCTTTACTTCATGTGATTCCATTCAATTTCTCGTATTATCTATTTTTTATGCTATGTTTACTTTTTTTTTCCACTAGCATATTTTTGTTAGTATTCTAATTTTTAAATTAAAGTAGAACTCATTGTAGAGTAAAGTTATAGACTTGCATTTTCCTTTTCTTATAAATCAATTTTGTGTACGTTATGTTGAAATATTATCTTTTAATTCATATTTGTATATGTTATGTTCAGTTGCAAGTCATTTATTTTTTAGTTAGAAGGTTATCTTTTTGTTTATTTTAATAATTTATGATATTTAATATTTTTATTTTTGATATAATTTTTTGGTCAAAGATGCATTTATTTATAGACATGTTGTACTTTTTTTTGTTTTTATGATTAATTCAGTGAAATATACTAATTTGAAAAATATAAATCAATTATTTTTTCATGTATTAGTTAAGAACATATATTTATTAATTAGTATATTTTCAAAAGATGATATTTACTTAAATATTTAATTTTGCATCATTTATAAAGTTTCTCATTTGTCTAATATAAATTTTAAATAACTAACTTCATTTTAACTCTAATATAATCTTATGATTGCAATTGTGCATCCAAATGTGTAAATTACACTGTGGCAAAGAAACAGGTTCGTGTAATTACTAGGTTGTGTAATTACCAGACTGGCCATTACCACCCTGGTAATTACATCAATTTCAATTACCAGGTGAATTTCCAAACAGGACCCTTAATTATCATGTTATGAGATTCAGCCTTTATTCCTACAGAGAGCTCATCCATTTAGGGAAATTTTTTATTCACAGCAGTTTGTCAATAGGCGGTATTCTCATCTAAAGTTAATACTGTAAATATTTGGTGGAAAATTTAATTTCGATATTTATGTGAATTTTTAACTTTTGAAATGCATATTTATAAATGTATTGCAGTGTTCCGCCATTTAGTAATTTTATGTGTTATTATGATGCTGGAGTAAGACTGGTTACTGCTATACCATTTGATGCACATGTACACTCTTGGCTGGACTATTTCTAAAATTTGAATACTTCACTAGAAGTTTATTGGAGTCGAGAGCAAGTGATGACATGGATCCATTATATTCATTTCTGTTGCAATTTTCCAATAACCTTACTATGAGACCTTAGTTTGTCTGGTGAACGGGTGCCAAAGCTTATTTAAGTAGATGTGATATTTCTCATTATGCGGCTTTCAAGTTTCACTTATTCATGGCATCCATTTACTGCAATATTGGTTATCAAATTAGTCAACGCTTTTATCCAGGGTGCTACTGTCCCTTTGGTAGTCAAGTGGGCAGATACTGAAAAGGAAAGGCAGGCCCGGAGGGCTCAGAAATCTCTATCTCATGCTTCCGACTCTAGACAGCATCCCTCTTTGTTTGGAGCCCTACCTATGGGTTACATGCCACCATACAATGGCTATGGCTATCAGGTTCATTGACTTGCATTCTCTAGTAAATTTGGTTTTCAAGCTTATTGCTTTGTATTTTGCTCTGAATACTCCTTTTTGTACTTTTTCAGTACCTTCTTGATACTAGTTTTCAGTTTCTTATTACAAAAGTTCTATTTGAATTGACATGCTGCTCTCCTGCAAATTCCAGCAATTATTACAATTTTCAATGTGAATTGAGATGATCATTTACCTTAATTTCATCATTCCTTCCTTTCCCATTCTGGTTTCGTTTATCAATTTAAAGGTCAGTTGCATAGTTAATATACTCACTTTGCAGACTCCTGGGGCATATGGGCTCATGCAGTATCGTCTACCATCAATGCAAAATCAGTCTGCATTTCAGAATATAGTCCCACCAATAAACCAAGCAAGTGCTCTACGT-GGAGGTGCA-CCTGATCTTTCACCTGGAA-TTAGTCCAAGAAATTATGCCATGT</genome_strand>
        <mrna_strand>GCA-CGAGAGATGCCCTCCATGGAAAGCATAAGATGGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGCTACTGTCCCTTTGGTAGTCAAGTGGGCAGATACTGAAAAGGAAAGGCAGGCCCGGAGGGCTCAGAAATCTCTATCTCATGCTTCCGACTCTAGACAGCATCCCTCTTTGTTTGGAGCCCTACCTATGGGTTACATGCCACCATACAATGGCTATGGCTATCAG..........................................................................................................................................................................................................................................................................................................ACTCCTGGGGCATATGGGCTCATGCAGTATCGTCTACCATCAATGCAAAATCAGTCTGCATTTCAGAATATAGTCCCACCAATAAACCAAGCAAGTGCTCTACGTGGGAGGTGCACCCTGATCTTTCACCTGGAATTTAGTCCAAGAAATTATGCCATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E202734" ref_strand="+" ref_description="SGN-E202734 [cLEB-1-O23]">
      <seq>gcacgagagatgccctccatggaaagcataagatggagggtgctactgtccctttggtagtcaagtgggcagatactgaaaaggaaaggcaggcccggagggctcagaaatctctatctcatgcttccgactctagacagcatccctctttgtttggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0170H21-SOlMA/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C09HBa0170H21.1" temp_strand="+" temp_description="C09HBa0170H21.1  AC217788.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0170H21.seq upload_account_name:spain">
        <position start="124543" stop="127509"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="124843" g_stop="124881" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="38" r_length="38" r_score="0.923"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="124882" i_stop="127088" i_length="2207">
            <donor d_prob="0.992" d_score="0.00"/>
            <acceptor a_prob="0.761" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="127089" g_stop="127209" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="39" r_stop="159" r_length="121" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0170H21.1" gen_strand="+" ref_id="SGN-E202734" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>160</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0170H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E202734" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="124843" e_stop="124881"/>
          <exon e_start="127089" e_stop="127209"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGCAATAGATGCCCTCCATGGAAAGCATAAGATGGAGGTTTGTTTCAATCTGCAAGTTGACTGCTGATATGAGGCCTTTGAAATTGATTTTTCAGTATGCGTAGTGGCTATAAATGTCCAACATTTGTGCATAAAATGAATAGGATTTTATAAGTGCAGTGGTTTTAGTGTGGGCATTCTTTAAGCAGTTGTTCTGGTGATAGTCCTTCCTCTGGTGTTGTAGAACTTGTTAAACATTCAGGATGGGGATAACCTAATTAATACATTTGTCCTGCTGTCTTTGCAATGTTTGTGTAAGTACTCCTTGCAGGAATAGCATCTGTCATCATGAAAGCACCAATTGTTGTGGCTTTGGATTGGGGTCATTTGTCAATCAGCATTTGTCTGTGATGTGAATGGCTTATTTATGGTCCTGCTAGCAGGGCCAACACAATGGCCTATTTGCTGATATTCGCTGTTCAGAGGAGACATTATCCGGTGATTTTTTTTTCTAGGTCATTTCAACATGGCATTCGTGCTTGGAGTCGTTATGCCTTGAGGCTCTTGACTGAAATAATGAGATTTTGATTGCAATGGTCTGTTCAATTTTGTCTCATGCTCGGGGAATAATATTAAATTATTTTCTTGTTGAAACCGTGAAAGAAAACTTAAGGGCTGTTTGGAAAGCCACCCTGGTTATTGGATTTGGTATAATTGAGTGTATTTACACTGGCGTGTTTGGTTGGCTATGTAATTACTTTATTAGCACGTAACTGATTGCAATTGGCAGGGTTAATTACACTACACTGTGTAATTACAAGTTGATTACTTTTAATTTCTTTTTTTTATGTTTCTTTTTTTTTGTTTTAATTTATTTTTTATTTCTATTATTTTAAATTCTTTTTTTATTTTTATTATTCCAAAAAATTCTAAATGTTTTTGTTTGTTATTATTTATATTTCATTTTCTTCTCATTTTCAACCTTTACTTCATGTGATTCCATTCAATTTCTCGTATTATCTATTTTTTATGCTATGTTTACTTTTTTTTTCCACTAGCATATTTTTGTTAGTATTCTAATTTTTAAATTAAAGTAGAACTCATTGTAGAGTAAAGTTATAGACTTGCATTTTCCTTTTCTTATAAATCAATTTTGTGTACGTTATGTTGAAATATTATCTTTTAATTCATATTTGTATATGTTATGTTCAGTTGCAAGTCATTTATTTTTTAGTTAGAAGGTTATCTTTTTGTTTATTTTAATAATTTATGATATTTAATATTTTTATTTTTGATATAATTTTTTGGTCAAAGATGCATTTATTTATAGACATGTTGTACTTTTTTTTGTTTTTATGATTAATTCAGTGAAATATACTAATTTGAAAAATATAAATCAATTATTTTTTCATGTATTAGTTAAGAACATATATTTATTAATTAGTATATTTTCAAAAGATGATATTTACTTAAATATTTAATTTTGCATCATTTATAAAGTTTCTCATTTGTCTAATATAAATTTTAAATAACTAACTTCATTTTAACTCTAATATAATCTTATGATTGCAATTGTGCATCCAAATGTGTAAATTACACTGTGGCAAAGAAACAGGTTCGTGTAATTACTAGGTTGTGTAATTACCAGACTGGCCATTACCACCCTGGTAATTACATCAATTTCAATTACCAGGTGAATTTCCAAACAGGACCCTTAATTATCATGTTATGAGATTCAGCCTTTATTCCTACAGAGAGCTCATCCATTTAGGGAAATTTTTTATTCACAGCAGTTTGTCAATAGGCGGTATTCTCATCTAAAGTTAATACTGTAAATATTTGGTGGAAAATTTAATTTCGATATTTATGTGAATTTTTAACTTTTGAAATGCATATTTATAAATGTATTGCAGTGTTCCGCCATTTAGTAATTTTATGTGTTATTATGATGCTGGAGTAAGACTGGTTACTGCTATACCATTTGATGCACATGTACACTCTTGGCTGGACTATTTCTAAAATTTGAATACTTCACTAGAAGTTTATTGGAGTCGAGAGCAAGTGATGACATGGATCCATTATATTCATTTCTGTTGCAATTTTCCAATAACCTTACTATGAGACCTTAGTTTGTCTGGTGAACGGGTGCCAAAGCTTATTTAAGTAGATGTGATATTTCTCATTATGCGGCTTTCAAGTTTCACTTATTCATGGCATCCATTTACTGCAATATTGGTTATCAAATTAGTCAACGCTTTTATCCAGGGTGCTACTGTCCCTTTGGTAGTCAAGTGGGCAGATACTGAAAAGGAAAGGCAGGCCCGGAGGGCTCAGAAATCTCTATCTCATGCTTCCGACTCTAGACAGCATCCCTCTTTGTTTGGAG</genome_strand>
        <mrna_strand>GCA-CGAGAGATGCCCTCCATGGAAAGCATAAGATGGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGCTACTGTCCCTTTGGTAGTCAAGTGGGCAGATACTGAAAAGGAAAGGCAGGCCCGGAGGGCTCAGAAATCTCTATCTCATGCTTCCGACTCTAGACAGCATCCCTCTTTGTTTGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>76</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="12655" PGL_stop="10257"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="12655" e_stop="10257"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="12655" e_stop="10257" e_length="2399"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12655" stop="11972"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316583" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12655" stop="11976"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316392" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12653" stop="11898"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316550" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12518" stop="11722"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316488" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12518" stop="11863"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316412" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12504" stop="11824"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395399" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12503" stop="12035"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205045" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11957" stop="11334"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334709" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11544" stop="11070"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207952" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11492" stop="10831"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341666" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11244" stop="10691"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255167" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10947" stop="10257"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395398" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAATCTCTACTAAAATCCCTTATAAACTCTCTATCTATTCCTACTCCTGCCTTCCTCCCAAATCCTTTAACCCCAGATGATATTCATCCATAAAACTCATCAGAGATAAATCCTTTAACCCCAGATGATATTCATCCATAAAACTCATCAGAGATTTCCAGATCTGTACAGTTGATGACCATGGATCAGTCCATTTTCAGATCTTTGATTGAATGGTTTAGATTGATTCAATTAAAGATTGATGTTCGCATATCCTCGAAGCAGGTTCGAATCTTAATTTTTATAAACAATTATTGTTTAAGTTTATGTCTTTGCTTTCATCTTTATCTGTGTATACTGAGGATGAACCATATACTTGATGTTTATATCTACTAGTATTGTTTATGAAATAAAAGTGAAATTAATGAATATCTTGTGTTAGTTTGACTGGAGGCAGTTTTCAATCTACTTGATTTACTATTTTATGTCCCCTTATTTTTTGCATATCTTGTTTCCTTGCTTTGAACATCTAGACGAGTGAAGCAACGCTTAGATGGTTTAGGCATGTGTACAGGAAGCGCATAGACATCCGGTGAGAAAGTGCAATAGGTTGATAGCAAGGGGTAGAGATAAACAAAAAAAGTATTAATGAAGTGATTAGATATGACATAAAACAACTTTATTTTGTCAAGTACATGACTCTAGATAAGGAGTGAGGGTCGACTATTTGGGTAGAAGGTTAGTAGGTTGAAGTGTTATCCTGCATTGCAAAGGTTTATGCCTGTTAGGGTATGTTTTAGTACTTGTTACCCTTGTGATTCTTGTCATATGTCGTTTATTGTGTTTTAATTATCGCATTGTTTTATTGTTCTTATAGTTTTTTTCTTGTAAATTTCACACTACTTTCTTTTTAACTGTTACGTTTTCTTTATTGTTTTTATTTCTTTTACTTTGATTTGATGCGTACAGTCGAGAATTCTTCGAAAATAGTCTTTCTAGCTTCTTGAGGTAGTGGTGAGTTGCGTACACTATACACTCTCAGTCCCCACTTAGTGGAATTTCTCTGTGAATGTTGTTGTTGTATAGGATGTTGAATGAATGCAATTATGAAAGAAAAGAAAAATACAACAACAATATACATAGTGAAATTCCACAAGAAAGGTTTTGGAAGGGTAGAGTATATGTAGACCTTACCATTACCTCGTGGAGGTAGAAATGTTTTCAAAAGAGTCTCGGCTCAAGTGCAACAAATTCTAGTGCAAGAATTAATAAAACAATATAACAAAACATAATAATTACCAGGAAAGTGGTGGAAATCCTACAAGAATAACAAAATAATGCGATAATTAAAACTCTAGTAAAAACATATGACAATAGATGTTAAAAGCAAGAAGTACAATAATACGGCTAGTACAAGACAAACATAAACTCGTGAAAAGCAAGAGAACACTCCACTACCATCTACCCTAGTACCTATCCTCCAGACTCTCTTATCTAAGGTCATGTCCTCGACAACTTGAAGGTGTGTCATGTCATGTCTAATCACCTATCTCCAACACTTCTTTGACCTACCTCTCCCTATACCTAGTATGACCAGCCTTTTGCACTTCCTTAGTAAACGTGTGCACATCTCTTCACATTTCCAAACCATTTCAATCAGACTTTTTTTGTCAAAGAAAGTTACAAAGTGCAAAATAACACAATACCATACTCTATTTTTTTTTTGGAAGGGGTGGTTACTCCATATCAAAGAAAATAGTTATTTCGAACAACCATAAATTAGTTTGAAGTTTGAACCATATAGCGAACCTGTGTAGTTTGTAGATGTTTTATTCACAGCAGCAAGAGATGGGAGATAACTTAGTTTGAAGCATATAGCAAACCTCATAAATCCAAGTGTCTAAGTATTTATGGTGATAGTTTTAAAAATTACCAAACATAGTAAATCCCTAACAACTATTGATTGATTAGGGCTGTTATACCAACTTATAATCTAAGCTTTATTTTACTTGTATTTGTTGCTCAAGCCACTTTGAGCTGATTGAACAAAACCAATTGCTACACAAGATTGATTTATGTTGTTATATATATATATTGCTCTCTAACATTTACGTTGCTTCTTATTTGGGAGCTACACTTGAAGAAAGTGAAAATTGAGAGCAATTGGGAAGATATTAGCAGTTTATATCTATGAAGTTTCCTTTTAAGAGTTCTCTTTTATTTTCGATCAAACCTCCTATCCAGGGGCGGAGCTACAGTGTTATGTGGGGAAAGAGTTTGGACGAATTCAATTACTTTTCTATAACTTCTATATTTGTATTAGAAAATCGAATAACTAAACAAAAATATTTTACATAATTGGATGATTCATTGGTAAGTAAGAGGCTACCACATTAATCAATATTTTCTCCTTTTCAGCA</gDNA_template>
            <first_frame> Q  S  L  L  K  S  L  I  N  S  L  S  I  P  T  P  A  F  L  P  N  P  L  T  P  D  D  I  H  P  *  N  S  S  E  I  N  P  L  T  P  D  D  I  H  P  *  N  S  S  E  I  S  R  S  V  Q  L  M  T  M  D  Q  S  I  F  R  S  L  I  E  W  F  R  L  I  Q  L  K  I  D  V  R  I  S  S  K  Q  V  R  I  L  I  F  I  N  N  Y  C  L  S  L  C  L  C  F  H  L  Y  L  C  I  L  R  M  N  H  I  L  D  V  Y  I  Y  *  Y  C  L  *  N  K  S  E  I  N  E  Y  L  V  L  V  *  L  E  A  V  F  N  L  L  D  L  L  F  Y  V  P  L  F  F  A  Y  L  V  S  L  L  *  T  S  R  R  V  K  Q  R  L  D  G  L  G  M  C  T  G  S  A  *  T  S  G  E  K  V  Q  *  V  D  S  K  G  *  R  *  T  K  K  V  L  M  K  *  L  D  M  T  *  N  N  F  I  L  S  S  T  *  L  *  I  R  S  E  G  R  L  F  G  *  K  V  S  R  L  K  C  Y  P  A  L  Q  R  F  M  P  V  R  V  C  F  S  T  C  Y  P  C  D  S  C  H  M  S  F  I  V  F  *  L  S  H  C  F  I  V  L  I  V  F  F  L  *  I  S  H  Y  F  L  F  N  C  Y  V  F  F  I  V  F  I  S  F  T  L  I  *  C  V  Q  S  R  I  L  R  K  *  S  F  *  L  L  E  V  V  V  S  C  V  H  Y  T  L  S  V  P  T  *  W  N  F  S  V  N  V  V  V  V  *  D  V  E  *  M  Q  L  *  K  K  R  K  I  Q  Q  Q  Y  T  *  *  N  S  T  R  K  V  L  E  G  *  S  I  C  R  P  Y  H  Y  L  V  E  V  E  M  F  S  K  E  S  R  L  K  C  N  K  F  *  C  K  N  *  *  N  N  I  T  K  H  N  N  Y  Q  E  S  G  G  N  P  T  R  I  T  K  *  C  D  N  *  N  S  S  K  N  I  *  Q  *  M  L  K  A  R  S  T  I  I  R  L  V  Q  D  K  H  K  L  V  K  S  K  R  T  L  H  Y  H  L  P  *  Y  L  S  S  R  L  S  Y  L  R  S  C  P  R  Q  L  E  G  V  S  C  H  V  *  S  P  I  S  N  T  S  L  T  Y  L  S  L  Y  L  V  *  P  A  F  C  T  S  L  V  N  V  C  T  S  L  H  I  S  K  P  F  Q  S  D  F  F  C  Q  R  K  L  Q  S  A  K  *  H  N  T  I  L  Y  F  F  F  G  R  G  G  Y  S  I  S  K  K  I  V  I  S  N  N  H  K  L  V  *  S  L  N  H  I  A  N  L  C  S  L  *  M  F  Y  S  Q  Q  Q  E  M  G  D  N  L  V  *  S  I  *  Q  T  S  *  I  Q  V  S  K  Y  L  W  *  *  F  *  K  L  P  N  I  V  N  P  *  Q  L  L  I  D  *  G  C  Y  T  N  L  *  S  K  L  Y  F  T  C  I  C  C  S  S  H  F  E  L  I  E  Q  N  Q  L  L  H  K  I  D  L  C  C  Y  I  Y  I  L  L  S  N  I  Y  V  A  S  Y  L  G  A  T  L  E  E  S  E  N  *  E  Q  L  G  R  Y  *  Q  F  I  S  M  K  F  P  F  K  S  S  L  L  F  S  I  K  P  P  I  Q  G  R  S  Y  S  V  M  W  G  K  S  L  D  E  F  N  Y  F  S  I  T  S  I  F  V  L  E  N  R  I  T  K  Q  K  Y  F  T  *  L  D  D  S  L  V  S  K  R  L  P  H  *  S  I  F  S  P  F  Q   </first_frame>
            <second_frame>  N  L  Y  *  N  P  L  *  T  L  Y  L  F  L  L  L  P  S  S  Q  I  L  *  P  Q  M  I  F  I  H  K  T  H  Q  R  *  I  L  *  P  Q  M  I  F  I  H  K  T  H  Q  R  F  P  D  L  Y  S  *  *  P  W  I  S  P  F  S  D  L  *  L  N  G  L  D  *  F  N  *  R  L  M  F  A  Y  P  R  S  R  F  E  S  *  F  L  *  T  I  I  V  *  V  Y  V  F  A  F  I  F  I  C  V  Y  *  G  *  T  I  Y  L  M  F  I  S  T  S  I  V  Y  E  I  K  V  K  L  M  N  I  L  C  *  F  D  W  R  Q  F  S  I  Y  L  I  Y  Y  F  M  S  P  Y  F  L  H  I  L  F  P  C  F  E  H  L  D  E  *  S  N  A  *  M  V  *  A  C  V  Q  E  A  H  R  H  P  V  R  K  C  N  R  L  I  A  R  G  R  D  K  Q  K  K  Y  *  *  S  D  *  I  *  H  K  T  T  L  F  C  Q  V  H  D  S  R  *  G  V  R  V  D  Y  L  G  R  R  L  V  G  *  S  V  I  L  H  C  K  G  L  C  L  L  G  Y  V  L  V  L  V  T  L  V  I  L  V  I  C  R  L  L  C  F  N  Y  R  I  V  L  L  F  L  *  F  F  S  C  K  F  H  T  T  F  F  L  T  V  T  F  S  L  L  F  L  F  L  L  L  *  F  D  A  Y  S  R  E  F  F  E  N  S  L  S  S  F  L  R  *  W  *  V  A  Y  T  I  H  S  Q  S  P  L  S  G  I  S  L  *  M  L  L  L  Y  R  M  L  N  E  C  N  Y  E  R  K  E  K  Y  N  N  N  I  H  S  E  I  P  Q  E  R  F  W  K  G  R  V  Y  V  D  L  T  I  T  S  W  R  *  K  C  F  Q  K  S  L  G  S  S  A  T  N  S  S  A  R  I  N  K  T  I  *  Q  N  I  I  I  T  R  K  V  V  E  I  L  Q  E  *  Q  N  N  A  I  I  K  T  L  V  K  T  Y  D  N  R  C  *  K  Q  E  V  Q  *  Y  G  *  Y  K  T  N  I  N  S  *  K  A  R  E  H  S  T  T  I  Y  P  S  T  Y  P  P  D  S  L  I  *  G  H  V  L  D  N  L  K  V  C  H  V  M  S  N  H  L  S  P  T  L  L  *  P  T  S  P  Y  T  *  Y  D  Q  P  F  A  L  P  *  *  T  C  A  H  L  F  T  F  P  N  H  F  N  Q  T  F  F  V  K  E  S  Y  K  V  Q  N  N  T  I  P  Y  S  I  F  F  L  E  G  V  V  T  P  Y  Q  R  K  *  L  F  R  T  T  I  N  *  F  E  V  *  T  I  *  R  T  C  V  V  C  R  C  F  I  H  S  S  K  R  W  E  I  T  *  F  E  A  Y  S  K  P  H  K  S  K  C  L  S  I  Y  G  D  S  F  K  N  Y  Q  T  *  *  I  P  N  N  Y  *  L  I  R  A  V  I  P  T  Y  N  L  S  F  I  L  L  V  F  V  A  Q  A  T  L  S  *  L  N  K  T  N  C  Y  T  R  L  I  Y  V  V  I  Y  I  Y  C  S  L  T  F  T  L  L  L  I  W  E  L  H  L  K  K  V  K  I  E  S  N  W  E  D  I  S  S  L  Y  L  *  S  F  L  L  R  V  L  F  Y  F  R  S  N  L  L  S  R  G  G  A  T  V  L  C  G  E  R  V  W  T  N  S  I  T  F  L  *  L  L  Y  L  Y  *  K  I  E  *  L  N  K  N  I  L  H  N  W  M  I  H  W  *  V  R  G  Y  H  I  N  Q  Y  F  L  L  F  S  </second_frame>
            <third_frame>   I  S  T  K  I  P  Y  K  L  S  I  Y  S  Y  S  C  L  P  P  K  S  F  N  P  R  *  Y  S  S  I  K  L  I  R  D  K  S  F  N  P  R  *  Y  S  S  I  K  L  I  R  D  F  Q  I  C  T  V  D  D  H  G  S  V  H  F  Q  I  F  D  *  M  V  *  I  D  S  I  K  D  *  C  S  H  I  L  E  A  G  S  N  L  N  F  Y  K  Q  L  L  F  K  F  M  S  L  L  S  S  L  S  V  Y  T  E  D  E  P  Y  T  *  C  L  Y  L  L  V  L  F  M  K  *  K  *  N  *  *  I  S  C  V  S  L  T  G  G  S  F  Q  S  T  *  F  T  I  L  C  P  L  I  F  C  I  S  C  F  L  A  L  N  I  *  T  S  E  A  T  L  R  W  F  R  H  V  Y  R  K  R  I  D  I  R  *  E  S  A  I  G  *  *  Q  G  V  E  I  N  K  K  S  I  N  E  V  I  R  Y  D  I  K  Q  L  Y  F  V  K  Y  M  T  L  D  K  E  *  G  S  T  I  W  V  E  G  *  *  V  E  V  L  S  C  I  A  K  V  Y  A  C  *  G  M  F  *  Y  L  L  P  L  *  F  L  S  Y  V  V  Y  C  V  L  I  I  A  L  F  Y  C  S  Y  S  F  F  L  V  N  F  T  L  L  S  F  *  L  L  R  F  L  Y  C  F  Y  F  F  Y  F  D  L  M  R  T  V  E  N  S  S  K  I  V  F  L  A  S  *  G  S  G  E  L  R  T  L  Y  T  L  S  P  H  L  V  E  F  L  C  E  C  C  C  C  I  G  C  *  M  N  A  I  M  K  E  K  K  N  T  T  T  I  Y  I  V  K  F  H  K  K  G  F  G  R  V  E  Y  M  *  T  L  P  L  P  R  G  G  R  N  V  F  K  R  V  S  A  Q  V  Q  Q  I  L  V  Q  E  L  I  K  Q  Y  N  K  T  *  *  L  P  G  K  W  W  K  S  Y  K  N  N  K  I  M  R  *  L  K  L  *  *  K  H  M  T  I  D  V  K  S  K  K  Y  N  N  T  A  S  T  R  Q  T  *  T  R  E  K  Q  E  N  T  P  L  P  S  T  L  V  P  I  L  Q  T  L  L  S  K  V  M  S  S  T  T  *  R  C  V  M  S  C  L  I  T  Y  L  Q  H  F  F  D  L  P  L  P  I  P  S  M  T  S  L  L  H  F  L  S  K  R  V  H  I  S  S  H  F  Q  T  I  S  I  R  L  F  L  S  K  K  V  T  K  C  K  I  T  Q  Y  H  T  L  F  F  F  W  K  G  W  L  L  H  I  K  E  N  S  Y  F  E  Q  P  *  I  S  L  K  F  E  P  Y  S  E  P  V  *  F  V  D  V  L  F  T  A  A  R  D  G  R  *  L  S  L  K  H  I  A  N  L  I  N  P  S  V  *  V  F  M  V  I  V  L  K  I  T  K  H  S  K  S  L  T  T  I  D  *  L  G  L  L  Y  Q  L  I  I  *  A  L  F  Y  L  Y  L  L  L  K  P  L  *  A  D  *  T  K  P  I  A  T  Q  D  *  F  M  L  L  Y  I  Y  I  A  L  *  H  L  R  C  F  L  F  G  S  Y  T  *  R  K  *  K  L  R  A  I  G  K  I  L  A  V  Y  I  Y  E  V  S  F  *  E  F  S  F  I  F  D  Q  T  S  Y  P  G  A  E  L  Q  C  Y  V  G  K  E  F  G  R  I  Q  L  L  F  Y  N  F  Y  I  C  I  R  K  S  N  N  *  T  K  I  F  Y  I  I  G  *  F  I  G  K  *  E  A  T  T  L  I  N  I  F  S  F  S  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0170H21.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="11156" stop="10899"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RCVMSCLITYLQHFFDLPLPIPSMTSLLHFLSKRVHISSHFQTISIRLFLSKKVTKCKITQYHTLFFFWKGWLLHIKENSYFEQP*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0170H21.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="12514" stop="12281"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>231</number_coding_nucleotides>
                  <number_encoded_amino_acids>77</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NSSEISRSVQLMTMDQSIFRSLIEWFRLIQLKIDVRISSKQVRILIFINNYCLSLCLCFHLYLCILRMNHILDVYIY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="12655" e_stop="12392"/>
            <exon e_start="10533" e_stop="10306"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="12655" e_stop="12392" e_length="264"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.000">
            <gDNA_intron_boundary i_start="12391" i_stop="10534" i_length="1858"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="10533" e_stop="10306" e_length="228"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12655" stop="12392"/>
              <exon start="10533" stop="10306"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341238" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAATCTCTACTAAAATCCCTTATAAACTCTCTATCTATTCCTACTCCTGCCTTCCTCCCAAATCCTTTAACCCCAGATGATATTCATCCATAAAACTCATCAGAGATAAATCCTTTAACCCCAGATGATATTCATCCATAAAACTCATCAGAGATTTCCAGATCTGTACAGTTGATGACCATGGATCAGTCCATTTTCAGATCTTTGATTGAATGGTTTAGATTGATTCAATTAAAGATTGATGTTCGCATATCCTCGAAGCAG : AAAGTGAAAATTGAGAGCAATTGGGAAGATATTAGCAGTTTATATCTATGAAGTTTCCTTTTAAGAGTTCTCTTTTATTTTCGATCAAACCTCCTATCCAGGGGCGGAGCTACAGTGTTATGTGGGGAAAGAGTTTGGACGAATTCAATTACTTTTCTATAACTTCTATATTTGTATTAGAAAATCGAATAACTAAACAAAAATATTTTACATAATTGGATGATTCAT</gDNA_template>
            <first_frame> Q  S  L  L  K  S  L  I  N  S  L  S  I  P  T  P  A  F  L  P  N  P  L  T  P  D  D  I  H  P  *  N  S  S  E  I  N  P  L  T  P  D  D  I  H  P  *  N  S  S  E  I  S  R  S  V  Q  L  M  T  M  D  Q  S  I  F  R  S  L  I  E  W  F  R  L  I  Q  L  K  I  D  V  R  I  S  S  K  Q  :  K  V  K  I  E  S  N  W  E  D  I  S  S  L  Y  L  *  S  F  L  L  R  V  L  F  Y  F  R  S  N  L  L  S  R  G  G  A  T  V  L  C  G  E  R  V  W  T  N  S  I  T  F  L  *  L  L  Y  L  Y  *  K  I  E  *  L  N  K  N  I  L  H  N  W  M  I  H </first_frame>
            <second_frame>  N  L  Y  *  N  P  L  *  T  L  Y  L  F  L  L  L  P  S  S  Q  I  L  *  P  Q  M  I  F  I  H  K  T  H  Q  R  *  I  L  *  P  Q  M  I  F  I  H  K  T  H  Q  R  F  P  D  L  Y  S  *  *  P  W  I  S  P  F  S  D  L  *  L  N  G  L  D  *  F  N  *  R  L  M  F  A  Y  P  R  S  R :   K  *  K  L  R  A  I  G  K  I  L  A  V  Y  I  Y  E  V  S  F  *  E  F  S  F  I  F  D  Q  T  S  Y  P  G  A  E  L  Q  C  Y  V  G  K  E  F  G  R  I  Q  L  L  F  Y  N  F  Y  I  C  I  R  K  S  N  N  *  T  K  I  F  Y  I  I  G  *  F   </second_frame>
            <third_frame>   I  S  T  K  I  P  Y  K  L  S  I  Y  S  Y  S  C  L  P  P  K  S  F  N  P  R  *  Y  S  S  I  K  L  I  R  D  K  S  F  N  P  R  *  Y  S  S  I  K  L  I  R  D  F  Q  I  C  T  V  D  D  H  G  S  V  H  F  Q  I  F  D  *  M  V  *  I  D  S  I  K  D  *  C  S  H  I  L  E  A   : E  S  E  N  *  E  Q  L  G  R  Y  *  Q  F  I  S  M  K  F  P  F  K  S  S  L  L  F  S  I  K  P  P  I  Q  G  R  S  Y  S  V  M  W  G  K  S  L  D  E  F  N  Y  F  S  I  T  S  I  F  V  L  E  N  R  I  T  K  Q  K  Y  F  T  *  L  D  D  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C09HBa0170H21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="16626" PGL_stop="17665"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="16626" e_stop="17665"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="16626" e_stop="17665" e_length="1040"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16626" stop="17285"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391604" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16661" stop="17177"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204975" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17008" stop="17665"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391603" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGACCAAAATTATTTTAAGACAATTCACTTTCAATTTTTAGTTCCTTTAAATATTAAATTTCTCACTCACATCAATTTTGTGTTTCAAATAATGGAATAGAAAAAAAATAGAACTTTGTTATGTTCGTATTTCCTTAATCCAGCAACTAACTCTCTCCACTGTTTAACTGAAAAGATCCCACGCATTATAAATTAATAGCTAGTGCTAAAGAAAATTACACAAAAGAGAGACGGATCTAAGATTCAATAGAAGTAGTGAAATCTAATACCATTATACATGTGATGGTTAGAATGGATTGAAAAAAATAGTTGTTGTTTCGAAGATAGATCTAGTCTCATTTGCTAAGTAAAATAGAATAGTTTAGTATCTTTTCTTTTTTGATATAAACAACTTTTCATAGAAGATGTAGATCAAAGTTGCAAGCTCCCTATGATCTGCATTTTCTATTCTAAGTCGATTATACCAAAAAATAAAGATTTTAAAAAATTTCATATTACTTTTGTGAATAAAATTAATATTAAATCTATTTTCAAAATATCTTTCATTTTTTTTCTTGCAGACTGACCATCATATCCATGATAATATTAATTAGCTTTCACCATTACTTTTGAGTTTTAGATTCTCCACCTATCTCTTCTGTGTAACTTACTTTCTTGCAAATTATTAGTTTATAACGTTTGAAATCTTTTGTGTTGGGCAGTGTTGAGACGGTGACTGTTTGTTTTAAGGAGATAGGAATAGCTATTGACTAATCATGCAAGATTGATTTATGTAGTTATATATTGTTCTCTAACATTTACATTTTTTCTTATTTGGAGCTTTGGATCGGAGCATACACTTGAAGAAGCAATTGGGAAGATGTTAGCAGATTATATATATGAAACCTTTTTTTAAGAGTTCTCTTTTACTTTCGATCAAACCTCCTGTTCAGCGGTGAAGCTACTGGAATCATATAATTTTTGTGTAAAGACTTATAAAAATAAGTGGATTGTTTATTGGTAAATAAATACATGTTTCATTCTCTTTTTAAATGAAAACC</gDNA_template>
            <first_frame> R  P  K  L  F  *  D  N  S  L  S  I  F  S  S  F  K  Y  *  I  S  H  S  H  Q  F  C  V  S  N  N  G  I  E  K  K  *  N  F  V  M  F  V  F  P  *  S  S  N  *  L  S  P  L  F  N  *  K  D  P  T  H  Y  K  L  I  A  S  A  K  E  N  Y  T  K  E  R  R  I  *  D  S  I  E  V  V  K  S  N  T  I  I  H  V  M  V  R  M  D  *  K  K  *  L  L  F  R  R  *  I  *  S  H  L  L  S  K  I  E  *  F  S  I  F  S  F  L  I  *  T  T  F  H  R  R  C  R  S  K  L  Q  A  P  Y  D  L  H  F  L  F  *  V  D  Y  T  K  K  *  R  F  *  K  I  S  Y  Y  F  C  E  *  N  *  Y  *  I  Y  F  Q  N  I  F  H  F  F  S  C  R  L  T  I  I  S  M  I  I  L  I  S  F  H  H  Y  F  *  V  L  D  S  P  P  I  S  S  V  *  L  T  F  L  Q  I  I  S  L  *  R  L  K  S  F  V  L  G  S  V  E  T  V  T  V  C  F  K  E  I  G  I  A  I  D  *  S  C  K  I  D  L  C  S  Y  I  L  F  S  N  I  Y  I  F  S  Y  L  E  L  W  I  G  A  Y  T  *  R  S  N  W  E  D  V  S  R  L  Y  I  *  N  L  F  L  R  V  L  F  Y  F  R  S  N  L  L  F  S  G  E  A  T  G  I  I  *  F  L  C  K  D  L  *  K  *  V  D  C  L  L  V  N  K  Y  M  F  H  S  L  F  K  *  K   </first_frame>
            <second_frame>  D  Q  N  Y  F  K  T  I  H  F  Q  F  L  V  P  L  N  I  K  F  L  T  H  I  N  F  V  F  Q  I  M  E  *  K  K  N  R  T  L  L  C  S  Y  F  L  N  P  A  T  N  S  L  H  C  L  T  E  K  I  P  R  I  I  N  *  *  L  V  L  K  K  I  T  Q  K  R  D  G  S  K  I  Q  *  K  *  *  N  L  I  P  L  Y  M  *  W  L  E  W  I  E  K  N  S  C  C  F  E  D  R  S  S  L  I  C  *  V  K  *  N  S  L  V  S  F  L  F  *  Y  K  Q  L  F  I  E  D  V  D  Q  S  C  K  L  P  M  I  C  I  F  Y  S  K  S  I  I  P  K  N  K  D  F  K  K  F  H  I  T  F  V  N  K  I  N  I  K  S  I  F  K  I  S  F  I  F  F  L  A  D  *  P  S  Y  P  *  *  Y  *  L  A  F  T  I  T  F  E  F  *  I  L  H  L  S  L  L  C  N  L  L  S  C  K  L  L  V  Y  N  V  *  N  L  L  C  W  A  V  L  R  R  *  L  F  V  L  R  R  *  E  *  L  L  T  N  H  A  R  L  I  Y  V  V  I  Y  C  S  L  T  F  T  F  F  L  I  W  S  F  G  S  E  H  T  L  E  E  A  I  G  K  M  L  A  D  Y  I  Y  E  T  F  F  *  E  F  S  F  T  F  D  Q  T  S  C  S  A  V  K  L  L  E  S  Y  N  F  C  V  K  T  Y  K  N  K  W  I  V  Y  W  *  I  N  T  C  F  I  L  F  L  N  E  N  </second_frame>
            <third_frame>   T  K  I  I  L  R  Q  F  T  F  N  F  *  F  L  *  I  L  N  F  S  L  T  S  I  L  C  F  K  *  W  N  R  K  K  I  E  L  C  Y  V  R  I  S  L  I  Q  Q  L  T  L  S  T  V  *  L  K  R  S  H  A  L  *  I  N  S  *  C  *  R  K  L  H  K  R  E  T  D  L  R  F  N  R  S  S  E  I  *  Y  H  Y  T  C  D  G  *  N  G  L  K  K  I  V  V  V  S  K  I  D  L  V  S  F  A  K  *  N  R  I  V  *  Y  L  F  F  F  D  I  N  N  F  S  *  K  M  *  I  K  V  A  S  S  L  *  S  A  F  S  I  L  S  R  L  Y  Q  K  I  K  I  L  K  N  F  I  L  L  L  *  I  K  L  I  L  N  L  F  S  K  Y  L  S  F  F  F  L  Q  T  D  H  H  I  H  D  N  I  N  *  L  S  P  L  L  L  S  F  R  F  S  T  Y  L  F  C  V  T  Y  F  L  A  N  Y  *  F  I  T  F  E  I  F  C  V  G  Q  C  *  D  G  D  C  L  F  *  G  D  R  N  S  Y  *  L  I  M  Q  D  *  F  M  *  L  Y  I  V  L  *  H  L  H  F  F  L  F  G  A  L  D  R  S  I  H  L  K  K  Q  L  G  R  C  *  Q  I  I  Y  M  K  P  F  F  K  S  S  L  L  L  S  I  K  P  P  V  Q  R  *  S  Y  W  N  H  I  I  F  V  *  R  L  I  K  I  S  G  L  F  I  G  K  *  I  H  V  S  F  S  F  *  M  K  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C09HBa0170H21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="24463" PGL_stop="25088"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="24463" e_stop="25088"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="24463" e_stop="25088" e_length="626"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24463" stop="25088"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E537608" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24463" stop="25078"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E547920" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24464" stop="25085"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266701" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAATACAAACGCCCAAATCAGAGAAGGAAACAATGGAAGTATCAAGTGGCTTTAGCGTCAAAAATGATGAAGTTGTGAAGCTGATGGAGGAAATTGAGAAGCTGAAAGAAGAAAACAGAGTTCAACAGGAGCTTCTATCGCAGAAAGATGAAGAGAAAAGAGAGGTCATCAGGCAGCTCAGTTTAGCTATGGATTTGCTGAGGGAGGAAAACATTATGCTGAGGAAGAAGAGTGTTGCTACGCCAAAATCATCTCCAAAGAAGGAAAACATCTTCGAGTACAAGACACTAAAAGAAGGGTTCCGGAAAGCATCATCATCTCCAAAGAAGGAAAGCGTCATTGAGCTCAAGACATTCAAGGACGGGTTCTGGAAGAGGCTCTTCAATTGATCTCCTTATTCAGAGACTGCAATTTGATATCATTCTATGTTCTAGTTGTGCAGTATTGTTTCATTCTTTATAGTACTAATTTAGTTACTATAGTATGTAGGATTCATAAGTTCTCTTATTTCATTTGCTATTTCTAGTACTCTCTAAACTCATTCTTGTTGTTATTGGTCTGACCAATTTGTTGCAGTATATGTAATAAAGTATTACTAGTAATTTTCAGTTCTACATTCATGCAC</gDNA_template>
            <first_frame> E  I  Q  T  P  K  S  E  K  E  T  M  E  V  S  S  G  F  S  V  K  N  D  E  V  V  K  L  M  E  E  I  E  K  L  K  E  E  N  R  V  Q  Q  E  L  L  S  Q  K  D  E  E  K  R  E  V  I  R  Q  L  S  L  A  M  D  L  L  R  E  E  N  I  M  L  R  K  K  S  V  A  T  P  K  S  S  P  K  K  E  N  I  F  E  Y  K  T  L  K  E  G  F  R  K  A  S  S  S  P  K  K  E  S  V  I  E  L  K  T  F  K  D  G  F  W  K  R  L  F  N  *  S  P  Y  S  E  T  A  I  *  Y  H  S  M  F  *  L  C  S  I  V  S  F  F  I  V  L  I  *  L  L  *  Y  V  G  F  I  S  S  L  I  S  F  A  I  S  S  T  L  *  T  H  S  C  C  Y  W  S  D  Q  F  V  A  V  Y  V  I  K  Y  Y  *  *  F  S  V  L  H  S  C   </first_frame>
            <second_frame>  K  Y  K  R  P  N  Q  R  R  K  Q  W  K  Y  Q  V  A  L  A  S  K  M  M  K  L  *  S  *  W  R  K  L  R  S  *  K  K  K  T  E  F  N  R  S  F  Y  R  R  K  M  K  R  K  E  R  S  S  G  S  S  V  *  L  W  I  C  *  G  R  K  T  L  C  *  G  R  R  V  L  L  R  Q  N  H  L  Q  R  R  K  T  S  S  S  T  R  H  *  K  K  G  S  G  K  H  H  H  L  Q  R  R  K  A  S  L  S  S  R  H  S  R  T  G  S  G  R  G  S  S  I  D  L  L  I  Q  R  L  Q  F  D  I  I  L  C  S  S  C  A  V  L  F  H  S  L  *  Y  *  F  S  Y  Y  S  M  *  D  S  *  V  L  L  F  H  L  L  F  L  V  L  S  K  L  I  L  V  V  I  G  L  T  N  L  L  Q  Y  M  *  *  S  I  T  S  N  F  Q  F  Y  I  H  A  </second_frame>
            <third_frame>   N  T  N  A  Q  I  R  E  G  N  N  G  S  I  K  W  L  *  R  Q  K  *  *  S  C  E  A  D  G  G  N  *  E  A  E  R  R  K  Q  S  S  T  G  A  S  I  A  E  R  *  R  E  K  R  G  H  Q  A  A  Q  F  S  Y  G  F  A  E  G  G  K  H  Y  A  E  E  E  E  C  C  Y  A  K  I  I  S  K  E  G  K  H  L  R  V  Q  D  T  K  R  R  V  P  E  S  I  I  I  S  K  E  G  K  R  H  *  A  Q  D  I  Q  G  R  V  L  E  E  A  L  Q  L  I  S  L  F  R  D  C  N  L  I  S  F  Y  V  L  V  V  Q  Y  C  F  I  L  Y  S  T  N  L  V  T  I  V  C  R  I  H  K  F  S  Y  F  I  C  Y  F  *  Y  S  L  N  S  F  L  L  L  L  V  *  P  I  C  C  S  I  C  N  K  V  L  L  V  I  F  S  S  T  F  M  H </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0170H21.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24463" stop="24852"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>387</number_coding_nucleotides>
                  <number_encoded_amino_acids>129</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EIQTPKSEKETMEVSSGFSVKNDEVVKLMEEIEKLKEENRVQQELLSQKDEEKREVIRQLSLAMDLLREENIMLRKKSVATPKSSPKKENIFEYKTLKEGFRKASSSPKKESVIELKTFKDGFWKRLFN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="26867" PGL_stop="25425"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="26867" e_stop="25425"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="26867" e_stop="25425" e_length="1443"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26867" stop="26418"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284393" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26808" stop="26290"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369330" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26808" stop="26377"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E555499" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26808" stop="26394"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249117" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26793" stop="25934"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703497" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26793" stop="26001"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703274" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26790" stop="26250"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246463" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26790" stop="26251"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246391" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26783" stop="25906"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E708523" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26783" stop="25911"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707318" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26782" stop="25934"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707915" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26782" stop="26254"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267861" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26775" stop="25999"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E702140" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26767" stop="26081"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E730367" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26726" stop="26397"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698588" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26663" stop="26114"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E299969" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26217" stop="25506"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E709221" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26037" stop="25481"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E371674" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25980" stop="25481"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280508" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25867" stop="25504"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220572" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25798" stop="25425"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E219084" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGATATGGGTATTTAGAATAGCAAATGAAATAAGAGTACTTATTAGTCCTCTTTTCTGCTTTTTGTTCCCCTACCAAAAGTCTCCAACAATGGCCGAGGCCCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAAGAGGAGGAGGAGGATGATGATGAAGAGGAGGAGGAGGATGATGATAATGGAATCGGGGTTAGAATTGGCGATGACAGAGAAAATCGCGGGAATCGAAGCCAATCTGAGGATGACGATGATGATGATGTTGATGATGATGAAGAAGTTGAGAATAGGGATGATGATGAAGAGGATCTTCGGAGAAGGCGGAGGGATGTGCTACGTCTCCGGCTACGTGACTTCGCCGCCAGAGCTGCCAATCGGCGAAACCGGATTCTGGACTGGGCAGAGATTCTGATGGGACTGGAAGACCACTCTATTGAGCTCCGGTTACAAGTTCCTGATGGCGATGGCTACGTCGGGAACCCTGGAGACTATGTGGACGCAGAGGGTTATGAAGCTTTACTGCAAACCCTAGCCGAGAGTGATGGTGGTGGAAGACGAGGAGCTCCACCAGCTTCCAAGAGTGCAATTGAGGGTCTCAATACATTGGTGATCAAGGAAGAGCAGGAGGTAATGGCATGTGCCATTTGTAAAGATGTAGTGAATGTGGGCGAAATGGCTAAGAATTTGCCCTGTGGTCATGGTTACCATGATGATTGTATAGTTCAATGGTTGGGTTCAAGGAATTCTTGTCCCGTCTGTAGGTTTGAATTGCCCACAGATGATCCTGAATACGAAGAGGAGCGCAAGAAGCGAGGAGCATGTGTTACTAGCAGTGGTTCTTCGAGCTCAAGTGAGGCGCCAGGTGCTGCCGCTGCTGCTGATGATAGTAGTCCTAGTTGCCTTTGATTGCTGCTTTGTGGTAAACTCAGCCATTGGCATTCTTTTTTAGCTTTGTCTCTTGCTTCTTTTTTGGTATTTGGTGATTGTTTTCCAGTGTAATTCCACCCTCTCCGCATTTCTTGAATGTAATAATCTGTTTATCTTAATGCTGGTATGAATTCGCCATTTGAATCCTACATATTATACAAACTATATTACTTCTTTTAGACAACAAAAAGACTCAATC</gDNA_template>
            <first_frame> G  Y  G  Y  L  E  *  Q  M  K  *  E  Y  L  L  V  L  F  S  A  F  C  S  P  T  K  S  L  Q  Q  W  P  R  P  L  Q  S  L  H  Q  P  G  R  I  L  I  T  G  A  T  S  V  R  H  E  L  P  S  K  P  Y  P  I  S  P  P  M  S  F  V  T  T  V  R  V  A  S  S  S  P  Y  P  H  V  L  Y  L  S  H  R  *  R  R  L  L  I  R  S  M  T  L  L  S  A  I  S  S  S  R  F  S  A  S  *  L  R  R  R  L  T  T  T  R  P  L  P  R  L  L  S  T  L  I  L  P  M  T  I  S  S  V  S  S  W  T  V  G  E  T  T  K  R  R  R  R  M  M  M  K  R  R  R  R  M  M  I  M  E  S  G  L  E  L  A  M  T  E  K  I  A  G  I  E  A  N  L  R  M  T  M  M  M  M  L  M  M  M  K  K  L  R  I  G  M  M  M  K  R  I  F  G  E  G  G  G  M  C  Y  V  S  G  Y  V  T  S  P  P  E  L  P  I  G  E  T  G  F  W  T  G  Q  R  F  *  W  D  W  K  T  T  L  L  S  S  G  Y  K  F  L  M  A  M  A  T  S  G  T  L  E  T  M  W  T  Q  R  V  M  K  L  Y  C  K  P  *  P  R  V  M  V  V  E  D  E  E  L  H  Q  L  P  R  V  Q  L  R  V  S  I  H  W  *  S  R  K  S  R  R  *  W  H  V  P  F  V  K  M  *  *  M  W  A  K  W  L  R  I  C  P  V  V  M  V  T  M  M  I  V  *  F  N  G  W  V  Q  G  I  L  V  P  S  V  G  L  N  C  P  Q  M  I  L  N  T  K  R  S  A  R  S  E  E  H  V  L  L  A  V  V  L  R  A  Q  V  R  R  Q  V  L  P  L  L  L  M  I  V  V  L  V  A  F  D  C  C  F  V  V  N  S  A  I  G  I  L  F  *  L  C  L  L  L  L  F  W  Y  L  V  I  V  F  Q  C  N  S  T  L  S  A  F  L  E  C  N  N  L  F  I  L  M  L  V  *  I  R  H  L  N  P  T  Y  Y  T  N  Y  I  T  S  F  R  Q  Q  K  D  S  I </first_frame>
            <second_frame>  D  M  G  I  *  N  S  K  *  N  K  S  T  Y  *  S  S  F  L  L  F  V  P  L  P  K  V  S  N  N  G  R  G  P  F  S  P  C  T  N  R  V  G  S  *  L  L  V  L  P  V  *  D  T  S  C  R  R  N  P  T  R  S  P  R  R  C  H  L  *  Q  L  *  E  W  L  R  R  V  H  T  L  T  C  C  I  C  L  T  G  D  G  V  Y  *  S  D  R  *  P  C  F  R  Q  S  V  H  P  G  S  P  P  H  S  *  G  G  A  *  Q  R  R  A  P  S  P  A  F  *  A  R  *  S  F  R  *  R  F  P  P  C  R  A  G  R  L  G  K  R  R  R  G  G  G  G  *  *  *  R  G  G  G  G  *  *  *  W  N  R  G  *  N  W  R  *  Q  R  K  S  R  E  S  K  P  I  *  G  *  R  *  *  *  C  *  *  *  *  R  S  *  E  *  G  *  *  *  R  G  S  S  E  K  A  E  G  C  A  T  S  P  A  T  *  L  R  R  Q  S  C  Q  S  A  K  P  D  S  G  L  G  R  D  S  D  G  T  G  R  P  L  Y  *  A  P  V  T  S  S  *  W  R  W  L  R  R  E  P  W  R  L  C  G  R  R  G  L  *  S  F  T  A  N  P  S  R  E  *  W  W  W  K  T  R  S  S  T  S  F  Q  E  C  N  *  G  S  Q  Y  I  G  D  Q  G  R  A  G  G  N  G  M  C  H  L  *  R  C  S  E  C  G  R  N  G  *  E  F  A  L  W  S  W  L  P  *  *  L  Y  S  S  M  V  G  F  K  E  F  L  S  R  L  *  V  *  I  A  H  R  *  S  *  I  R  R  G  A  Q  E  A  R  S  M  C  Y  *  Q  W  F  F  E  L  K  *  G  A  R  C  C  R  C  C  *  *  *  *  S  *  L  P  L  I  A  A  L  W  *  T  Q  P  L  A  F  F  F  S  F  V  S  C  F  F  F  G  I  W  *  L  F  S  S  V  I  P  P  S  P  H  F  L  N  V  I  I  C  L  S  *  C  W  Y  E  F  A  I  *  I  L  H  I  I  Q  T  I  L  L  L  L  D  N  K  K  T  Q   </second_frame>
            <third_frame>   I  W  V  F  R  I  A  N  E  I  R  V  L  I  S  P  L  F  C  F  L  F  P  Y  Q  K  S  P  T  M  A  E  A  P  S  V  P  A  P  T  G  S  D  P  D  Y  W  C  Y  Q  C  E  T  R  V  A  V  E  T  L  P  D  L  P  A  D  V  I  C  N  N  C  K  S  G  F  V  E  S  I  P  S  R  V  V  S  V  S  P  V  T  A  S  T  D  Q  I  D  D  P  A  F  G  N  Q  F  I  Q  V  L  R  L  I  A  E  A  A  L  D  N  D  A  P  P  P  P  P  S  E  H  A  D  P  S  D  D  D  F  L  R  V  E  L  D  G  W  G  N  D  E  E  E  E  E  D  D  D  E  E  E  E  E  D  D  D  N  G  I  G  V  R  I  G  D  D  R  E  N  R  G  N  R  S  Q  S  E  D  D  D  D  D  D  V  D  D  D  E  E  V  E  N  R  D  D  D  E  E  D  L  R  R  R  R  R  D  V  L  R  L  R  L  R  D  F  A  A  R  A  A  N  R  R  N  R  I  L  D  W  A  E  I  L  M  G  L  E  D  H  S  I  E  L  R  L  Q  V  P  D  G  D  G  Y  V  G  N  P  G  D  Y  V  D  A  E  G  Y  E  A  L  L  Q  T  L  A  E  S  D  G  G  G  R  R  G  A  P  P  A  S  K  S  A  I  E  G  L  N  T  L  V  I  K  E  E  Q  E  V  M  A  C  A  I  C  K  D  V  V  N  V  G  E  M  A  K  N  L  P  C  G  H  G  Y  H  D  D  C  I  V  Q  W  L  G  S  R  N  S  C  P  V  C  R  F  E  L  P  T  D  D  P  E  Y  E  E  E  R  K  K  R  G  A  C  V  T  S  S  G  S  S  S  S  S  E  A  P  G  A  A  A  A  A  D  D  S  S  P  S  C  L  *  L  L  L  C  G  K  L  S  H  W  H  S  F  L  A  L  S  L  A  S  F  L  V  F  G  D  C  F  P  V  *  F  H  P  L  R  I  S  *  M  *  *  S  V  Y  L  N  A  G  M  N  S  P  F  E  S  Y  I  L  Y  K  L  Y  Y  F  F  *  T  T  K  R  L  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0170H21.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26865" stop="25645"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1218</number_coding_nucleotides>
                  <number_encoded_amino_acids>406</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IWVFRIANEIRVLISPLFCFLFPYQKSPTMAEAPSVPAPTGSDPDYWCYQCETRVAVETLPDLPADVICNNCKSGFVESIPSRVVSVSPVTASTDQIDDPAFGNQFIQVLRLIAEAALDNDAPPPPPSEHADPSDDDFLRVELDGWGNDEEEEEDDDEEEEEDDDNGIGVRIGDDRENRGNRSQSEDDDDDDVDDDEEVENRDDDEEDLRRRRRDVLRLRLRDFAARAANRRNRILDWAEILMGLEDHSIELRLQVPDGDGYVGNPGDYVDAEGYEALLQTLAESDGGGRRGAPPASKSAIEGLNTLVIKEEQEVMACAICKDVVNVGEMAKNLPCGHGYHDDCIVQWLGSRNSCPVCRFELPTDDPEYEEERKKRGACVTSSGSSSSSEAPGAAAAADDSSPSCL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="26867" e_stop="25504"/>
            <exon e_start="25443" e_stop="25436"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.726" acc_prob="0.265" e_score="0.998"/>
          <exon-only e_score="0.750"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="26867" e_stop="25504" e_length="1364"/>
          </exon>
          <intron i_serial="1" don_prob="0.726" acc_prob="0.265">
            <gDNA_intron_boundary i_start="25503" i_stop="25444" i_length="60"/>
          </intron>
          <exon e_serial="2" e_score="0.750">
            <gDNA_exon_boundary e_start="25443" e_stop="25436" e_length="8"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26867" stop="26418"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284393" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26808" stop="26290"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369330" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26808" stop="26377"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E555499" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26808" stop="26394"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249117" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26793" stop="25934"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703497" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26793" stop="26001"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703274" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26790" stop="26250"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246463" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26790" stop="26251"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246391" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26783" stop="25906"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E708523" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26783" stop="25911"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707318" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26782" stop="25934"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707915" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26782" stop="26254"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267861" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26775" stop="25999"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E702140" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26767" stop="26081"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E730367" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26726" stop="26397"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698588" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26663" stop="26114"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E299969" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26217" stop="25506"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E709221" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26207" stop="25504"/>
              <exon start="25443" stop="25436"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369329" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25867" stop="25504"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220572" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGATATGGGTATTTAGAATAGCAAATGAAATAAGAGTACTTATTAGTCCTCTTTTCTGCTTTTTGTTCCCCTACCAAAAGTCTCCAACAATGGCCGAGGCCCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCCGCCGATGTCATTTGTAACAACTGTAAGAGTGGCTTCGTCGAGTCCATACCCTCACGTGTTGTATCTGTCTCACCGGTGACGGCGTCTACTGATCAGATCGATGACCCTGCTTTCGGCAATCAGTTCATCCAGGTTCTCCGCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAAGAGGAGGAGGAGGATGATGATGAAGAGGAGGAGGAGGATGATGATAATGGAATCGGGGTTAGAATTGGCGATGACAGAGAAAATCGCGGGAATCGAAGCCAATCTGAGGATGACGATGATGATGATGTTGATGATGATGAAGAAGTTGAGAATAGGGATGATGATGAAGAGGATCTTCGGAGAAGGCGGAGGGATGTGCTACGTCTCCGGCTACGTGACTTCGCCGCCAGAGCTGCCAATCGGCGAAACCGGATTCTGGACTGGGCAGAGATTCTGATGGGACTGGAAGACCACTCTATTGAGCTCCGGTTACAAGTTCCTGATGGCGATGGCTACGTCGGGAACCCTGGAGACTATGTGGACGCAGAGGGTTATGAAGCTTTACTGCAAACCCTAGCCGAGAGTGATGGTGGTGGAAGACGAGGAGCTCCACCAGCTTCCAAGAGTGCAATTGAGGGTCTCAATACATTGGTGATCAAGGAAGAGCAGGAGGTAATGGCATGTGCCATTTGTAAAGATGTAGTGAATGTGGGCGAAATGGCTAAGAATTTGCCCTGTGGTCATGGTTACCATGATGATTGTATAGTTCAATGGTTGGGTTCAAGGAATTCTTGTCCCGTCTGTAGGTTTGAATTGCCCACAGATGATCCTGAATACGAAGAGGAGCGCAAGAAGCGAGGAGCATGTGTTACTAGCAGTGGTTCTTCGAGCTCAAGTGAGGCGCCAGGTGCTGCCGCTGCTGCTGATGATAGTAGTCCTAGTTGCCTTTGATTGCTGCTTTGTGGTAAACTCAGCCATTGGCATTCTTTTTTAGCTTTGTCTCTTGCTTCTTTTTTGGTATTTGGTGATTGTTTTCCAGTGTAATTCCACCCTCTCCGCATTTCTTGAATGTAATAATCTGTTTATCTTAAT : ACAACAAA</gDNA_template>
            <first_frame> G  Y  G  Y  L  E  *  Q  M  K  *  E  Y  L  L  V  L  F  S  A  F  C  S  P  T  K  S  L  Q  Q  W  P  R  P  L  Q  S  L  H  Q  P  G  R  I  L  I  T  G  A  T  S  V  R  H  E  L  P  S  K  P  Y  P  I  S  P  P  M  S  F  V  T  T  V  R  V  A  S  S  S  P  Y  P  H  V  L  Y  L  S  H  R  *  R  R  L  L  I  R  S  M  T  L  L  S  A  I  S  S  S  R  F  S  A  S  *  L  R  R  R  L  T  T  T  R  P  L  P  R  L  L  S  T  L  I  L  P  M  T  I  S  S  V  S  S  W  T  V  G  E  T  T  K  R  R  R  R  M  M  M  K  R  R  R  R  M  M  I  M  E  S  G  L  E  L  A  M  T  E  K  I  A  G  I  E  A  N  L  R  M  T  M  M  M  M  L  M  M  M  K  K  L  R  I  G  M  M  M  K  R  I  F  G  E  G  G  G  M  C  Y  V  S  G  Y  V  T  S  P  P  E  L  P  I  G  E  T  G  F  W  T  G  Q  R  F  *  W  D  W  K  T  T  L  L  S  S  G  Y  K  F  L  M  A  M  A  T  S  G  T  L  E  T  M  W  T  Q  R  V  M  K  L  Y  C  K  P  *  P  R  V  M  V  V  E  D  E  E  L  H  Q  L  P  R  V  Q  L  R  V  S  I  H  W  *  S  R  K  S  R  R  *  W  H  V  P  F  V  K  M  *  *  M  W  A  K  W  L  R  I  C  P  V  V  M  V  T  M  M  I  V  *  F  N  G  W  V  Q  G  I  L  V  P  S  V  G  L  N  C  P  Q  M  I  L  N  T  K  R  S  A  R  S  E  E  H  V  L  L  A  V  V  L  R  A  Q  V  R  R  Q  V  L  P  L  L  L  M  I  V  V  L  V  A  F  D  C  C  F  V  V  N  S  A  I  G  I  L  F  *  L  C  L  L  L  L  F  W  Y  L  V  I  V  F  Q  C  N  S  T  L  S  A  F  L  E  C  N  N  L  F  I  L  I :   Q  Q  </first_frame>
            <second_frame>  D  M  G  I  *  N  S  K  *  N  K  S  T  Y  *  S  S  F  L  L  F  V  P  L  P  K  V  S  N  N  G  R  G  P  F  S  P  C  T  N  R  V  G  S  *  L  L  V  L  P  V  *  D  T  S  C  R  R  N  P  T  R  S  P  R  R  C  H  L  *  Q  L  *  E  W  L  R  R  V  H  T  L  T  C  C  I  C  L  T  G  D  G  V  Y  *  S  D  R  *  P  C  F  R  Q  S  V  H  P  G  S  P  P  H  S  *  G  G  A  *  Q  R  R  A  P  S  P  A  F  *  A  R  *  S  F  R  *  R  F  P  P  C  R  A  G  R  L  G  K  R  R  R  G  G  G  G  *  *  *  R  G  G  G  G  *  *  *  W  N  R  G  *  N  W  R  *  Q  R  K  S  R  E  S  K  P  I  *  G  *  R  *  *  *  C  *  *  *  *  R  S  *  E  *  G  *  *  *  R  G  S  S  E  K  A  E  G  C  A  T  S  P  A  T  *  L  R  R  Q  S  C  Q  S  A  K  P  D  S  G  L  G  R  D  S  D  G  T  G  R  P  L  Y  *  A  P  V  T  S  S  *  W  R  W  L  R  R  E  P  W  R  L  C  G  R  R  G  L  *  S  F  T  A  N  P  S  R  E  *  W  W  W  K  T  R  S  S  T  S  F  Q  E  C  N  *  G  S  Q  Y  I  G  D  Q  G  R  A  G  G  N  G  M  C  H  L  *  R  C  S  E  C  G  R  N  G  *  E  F  A  L  W  S  W  L  P  *  *  L  Y  S  S  M  V  G  F  K  E  F  L  S  R  L  *  V  *  I  A  H  R  *  S  *  I  R  R  G  A  Q  E  A  R  S  M  C  Y  *  Q  W  F  F  E  L  K  *  G  A  R  C  C  R  C  C  *  *  *  *  S  *  L  P  L  I  A  A  L  W  *  T  Q  P  L  A  F  F  F  S  F  V  S  C  F  F  F  G  I  W  *  L  F  S  S  V  I  P  P  S  P  H  F  L  N  V  I  I  C  L  S  *   : Y  N  K </second_frame>
            <third_frame>   I  W  V  F  R  I  A  N  E  I  R  V  L  I  S  P  L  F  C  F  L  F  P  Y  Q  K  S  P  T  M  A  E  A  P  S  V  P  A  P  T  G  S  D  P  D  Y  W  C  Y  Q  C  E  T  R  V  A  V  E  T  L  P  D  L  P  A  D  V  I  C  N  N  C  K  S  G  F  V  E  S  I  P  S  R  V  V  S  V  S  P  V  T  A  S  T  D  Q  I  D  D  P  A  F  G  N  Q  F  I  Q  V  L  R  L  I  A  E  A  A  L  D  N  D  A  P  P  P  P  P  S  E  H  A  D  P  S  D  D  D  F  L  R  V  E  L  D  G  W  G  N  D  E  E  E  E  E  D  D  D  E  E  E  E  E  D  D  D  N  G  I  G  V  R  I  G  D  D  R  E  N  R  G  N  R  S  Q  S  E  D  D  D  D  D  D  V  D  D  D  E  E  V  E  N  R  D  D  D  E  E  D  L  R  R  R  R  R  D  V  L  R  L  R  L  R  D  F  A  A  R  A  A  N  R  R  N  R  I  L  D  W  A  E  I  L  M  G  L  E  D  H  S  I  E  L  R  L  Q  V  P  D  G  D  G  Y  V  G  N  P  G  D  Y  V  D  A  E  G  Y  E  A  L  L  Q  T  L  A  E  S  D  G  G  G  R  R  G  A  P  P  A  S  K  S  A  I  E  G  L  N  T  L  V  I  K  E  E  Q  E  V  M  A  C  A  I  C  K  D  V  V  N  V  G  E  M  A  K  N  L  P  C  G  H  G  Y  H  D  D  C  I  V  Q  W  L  G  S  R  N  S  C  P  V  C  R  F  E  L  P  T  D  D  P  E  Y  E  E  E  R  K  K  R  G  A  C  V  T  S  S  G  S  S  S  S  S  E  A  P  G  A  A  A  A  A  D  D  S  S  P  S  C  L  *  L  L  L  C  G  K  L  S  H  W  H  S  F  L  A  L  S  L  A  S  F  L  V  F  G  D  C  F  P  V  *  F  H  P  L  R  I  S  *  M  *  *  S  V  Y  L  N  :  T  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0170H21.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26865" stop="25645"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1218</number_coding_nucleotides>
                  <number_encoded_amino_acids>406</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IWVFRIANEIRVLISPLFCFLFPYQKSPTMAEAPSVPAPTGSDPDYWCYQCETRVAVETLPDLPADVICNNCKSGFVESIPSRVVSVSPVTASTDQIDDPAFGNQFIQVLRLIAEAALDNDAPPPPPSEHADPSDDDFLRVELDGWGNDEEEEEDDDEEEEEDDDNGIGVRIGDDRENRGNRSQSEDDDDDDVDDDEEVENRDDDEEDLRRRRRDVLRLRLRDFAARAANRRNRILDWAEILMGLEDHSIELRLQVPDGDGYVGNPGDYVDAEGYEALLQTLAESDGGGRRGAPPASKSAIEGLNTLVIKEEQEVMACAICKDVVNVGEMAKNLPCGHGYHDDCIVQWLGSRNSCPVCRFELPTDDPEYEEERKKRGACVTSSGSSSSSEAPGAAAAADDSSPSCL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="26780" e_stop="26674"/>
            <exon e_start="26534" e_stop="25425"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="26780" e_stop="26674" e_length="107"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="26673" i_stop="26535" i_length="139"/>
          </intron>
          <exon e_serial="2" e_score="0.999">
            <gDNA_exon_boundary e_start="26534" e_stop="25425" e_length="1110"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26780" stop="26674"/>
              <exon start="26534" stop="25803"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E700592" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26217" stop="25506"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E709221" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26037" stop="25481"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E371674" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25980" stop="25481"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280508" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25867" stop="25504"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220572" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25798" stop="25425"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E219084" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAATGGCCGAGGCCCCTTCAGTCCCTGCACCAACCGGGTCGGATCCTGATTACTGGTGCTACCAGTGTGAGACACGAGTTGCCGTCGAAACCCTACCCGATCTCCCC : GCCTCATAGCTGAGGCGGCGCTTGACAACGACGCGCCCCCTCCCCCGCCTTCTGAGCACGCTGATCCTTCCGATGACGATTTCCTCCGTGTCGAGCTGGACGGTTGGGGAAACGACGAAGAGGAGGAGGAGGATGATGATGAAGAGGAGGAGGAGGATGATGATAATGGAATCGGGGTTAGAATTGGCGATGACAGAGAAAATCGCGGGAATCGAAGCCAATCTGAGGATGACGATGATGATGATGTTGATGATGATGAAGAAGTTGAGAATAGGGATGATGATGAAGAGGATCTTCGGAGAAGGCGGAGGGATGTGCTACGTCTCCGGCTACGTGACTTCGCCGCCAGAGCTGCCAATCGGCGAAACCGGATTCTGGACTGGGCAGAGATTCTGATGGGACTGGAAGACCACTCTATTGAGCTCCGGTTACAAGTTCCTGATGGCGATGGCTACGTCGGGAACCCTGGAGACTATGTGGACGCAGAGGGTTATGAAGCTTTACTGCAAACCCTAGCCGAGAGTGATGGTGGTGGAAGACGAGGAGCTCCACCAGCTTCCAAGAGTGCAATTGAGGGTCTCAATACATTGGTGATCAAGGAAGAGCAGGAGGTAATGGCATGTGCCATTTGTAAAGATGTAGTGAATGTGGGCGAAATGGCTAAGAATTTGCCCTGTGGTCATGGTTACCATGATGATTGTATAGTTCAATGGTTGGGTTCAAGGAATTCTTGTCCCGTCTGTAGGTTTGAATTGCCCACAGATGATCCTGAATACGAAGAGGAGCGCAAGAAGCGAGGAGCATGTGTTACTAGCAGTGGTTCTTCGAGCTCAAGTGAGGCGCCAGGTGCTGCCGCTGCTGCTGATGATAGTAGTCCTAGTTGCCTTTGATTGCTGCTTTGTGGTAAACTCAGCCATTGGCATTCTTTTTTAGCTTTGTCTCTTGCTTCTTTTTTGGTATTTGGTGATTGTTTTCCAGTGTAATTCCACCCTCTCCGCATTTCTTGAATGTAATAATCTGTTTATCTTAATGCTGGTATGAATTCGCCATTTGAATCCTACATATTATACAAACTATATTACTTCTTTTAGACAACAAAAAGACTCAATC</gDNA_template>
            <first_frame> Q  W  P  R  P  L  Q  S  L  H  Q  P  G  R  I  L  I  T  G  A  T  S  V  R  H  E  L  P  S  K  P  Y  P  I  S  P :   P  H  S  *  G  G  A  *  Q  R  R  A  P  S  P  A  F  *  A  R  *  S  F  R  *  R  F  P  P  C  R  A  G  R  L  G  K  R  R  R  G  G  G  G  *  *  *  R  G  G  G  G  *  *  *  W  N  R  G  *  N  W  R  *  Q  R  K  S  R  E  S  K  P  I  *  G  *  R  *  *  *  C  *  *  *  *  R  S  *  E  *  G  *  *  *  R  G  S  S  E  K  A  E  G  C  A  T  S  P  A  T  *  L  R  R  Q  S  C  Q  S  A  K  P  D  S  G  L  G  R  D  S  D  G  T  G  R  P  L  Y  *  A  P  V  T  S  S  *  W  R  W  L  R  R  E  P  W  R  L  C  G  R  R  G  L  *  S  F  T  A  N  P  S  R  E  *  W  W  W  K  T  R  S  S  T  S  F  Q  E  C  N  *  G  S  Q  Y  I  G  D  Q  G  R  A  G  G  N  G  M  C  H  L  *  R  C  S  E  C  G  R  N  G  *  E  F  A  L  W  S  W  L  P  *  *  L  Y  S  S  M  V  G  F  K  E  F  L  S  R  L  *  V  *  I  A  H  R  *  S  *  I  R  R  G  A  Q  E  A  R  S  M  C  Y  *  Q  W  F  F  E  L  K  *  G  A  R  C  C  R  C  C  *  *  *  *  S  *  L  P  L  I  A  A  L  W  *  T  Q  P  L  A  F  F  F  S  F  V  S  C  F  F  F  G  I  W  *  L  F  S  S  V  I  P  P  S  P  H  F  L  N  V  I  I  C  L  S  *  C  W  Y  E  F  A  I  *  I  L  H  I  I  Q  T  I  L  L  L  L  D  N  K  K  T  Q   </first_frame>
            <second_frame>  N  G  R  G  P  F  S  P  C  T  N  R  V  G  S  *  L  L  V  L  P  V  *  D  T  S  C  R  R  N  P  T  R  S  P   : R  L  I  A  E  A  A  L  D  N  D  A  P  P  P  P  P  S  E  H  A  D  P  S  D  D  D  F  L  R  V  E  L  D  G  W  G  N  D  E  E  E  E  E  D  D  D  E  E  E  E  E  D  D  D  N  G  I  G  V  R  I  G  D  D  R  E  N  R  G  N  R  S  Q  S  E  D  D  D  D  D  D  V  D  D  D  E  E  V  E  N  R  D  D  D  E  E  D  L  R  R  R  R  R  D  V  L  R  L  R  L  R  D  F  A  A  R  A  A  N  R  R  N  R  I  L  D  W  A  E  I  L  M  G  L  E  D  H  S  I  E  L  R  L  Q  V  P  D  G  D  G  Y  V  G  N  P  G  D  Y  V  D  A  E  G  Y  E  A  L  L  Q  T  L  A  E  S  D  G  G  G  R  R  G  A  P  P  A  S  K  S  A  I  E  G  L  N  T  L  V  I  K  E  E  Q  E  V  M  A  C  A  I  C  K  D  V  V  N  V  G  E  M  A  K  N  L  P  C  G  H  G  Y  H  D  D  C  I  V  Q  W  L  G  S  R  N  S  C  P  V  C  R  F  E  L  P  T  D  D  P  E  Y  E  E  E  R  K  K  R  G  A  C  V  T  S  S  G  S  S  S  S  S  E  A  P  G  A  A  A  A  A  D  D  S  S  P  S  C  L  *  L  L  L  C  G  K  L  S  H  W  H  S  F  L  A  L  S  L  A  S  F  L  V  F  G  D  C  F  P  V  *  F  H  P  L  R  I  S  *  M  *  *  S  V  Y  L  N  A  G  M  N  S  P  F  E  S  Y  I  L  Y  K  L  Y  Y  F  F  *  T  T  K  R  L  N  </second_frame>
            <third_frame>   M  A  E  A  P  S  V  P  A  P  T  G  S  D  P  D  Y  W  C  Y  Q  C  E  T  R  V  A  V  E  T  L  P  D  L  P  :  A  S  *  L  R  R  R  L  T  T  T  R  P  L  P  R  L  L  S  T  L  I  L  P  M  T  I  S  S  V  S  S  W  T  V  G  E  T  T  K  R  R  R  R  M  M  M  K  R  R  R  R  M  M  I  M  E  S  G  L  E  L  A  M  T  E  K  I  A  G  I  E  A  N  L  R  M  T  M  M  M  M  L  M  M  M  K  K  L  R  I  G  M  M  M  K  R  I  F  G  E  G  G  G  M  C  Y  V  S  G  Y  V  T  S  P  P  E  L  P  I  G  E  T  G  F  W  T  G  Q  R  F  *  W  D  W  K  T  T  L  L  S  S  G  Y  K  F  L  M  A  M  A  T  S  G  T  L  E  T  M  W  T  Q  R  V  M  K  L  Y  C  K  P  *  P  R  V  M  V  V  E  D  E  E  L  H  Q  L  P  R  V  Q  L  R  V  S  I  H  W  *  S  R  K  S  R  R  *  W  H  V  P  F  V  K  M  *  *  M  W  A  K  W  L  R  I  C  P  V  V  M  V  T  M  M  I  V  *  F  N  G  W  V  Q  G  I  L  V  P  S  V  G  L  N  C  P  Q  M  I  L  N  T  K  R  S  A  R  S  E  E  H  V  L  L  A  V  V  L  R  A  Q  V  R  R  Q  V  L  P  L  L  L  M  I  V  V  L  V  A  F  D  C  C  F  V  V  N  S  A  I  G  I  L  F  *  L  C  L  L  L  L  F  W  Y  L  V  I  V  F  Q  C  N  S  T  L  S  A  F  L  E  C  N  N  L  F  I  L  M  L  V  *  I  R  H  L  N  P  T  Y  Y  T  N  Y  I  T  S  F  R  Q  Q  K  D  S  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0170H21.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26710" stop="26674"/>
                    <exon start="26534" stop="25645"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>924</number_coding_nucleotides>
                  <number_encoded_amino_acids>308</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DTSCRRNPTRSPRLIAEAALDNDAPPPPPSEHADPSDDDFLRVELDGWGNDEEEEEDDDEEEEEDDDNGIGVRIGDDRENRGNRSQSEDDDDDDVDDDEEVENRDDDEEDLRRRRRDVLRLRLRDFAARAANRRNRILDWAEILMGLEDHSIELRLQVPDGDGYVGNPGDYVDAEGYEALLQTLAESDGGGRRGAPPASKSAIEGLNTLVIKEEQEVMACAICKDVVNVGEMAKNLPCGHGYHDDCIVQWLGSRNSCPVCRFELPTDDPEYEEERKKRGACVTSSGSSSSSEAPGAAAAADDSSPSCL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="25503" PGL_stop="26054"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="25503" e_stop="26054"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="25503" e_stop="26054" e_length="552"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25503" stop="26054"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246069" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CATTAAGATAAACAGATTATTACATTCAAGAAATGCGGAGAGGGTGGAATTACACTGGAAAACAATCACCAAATACCAAAAAAGAAGCAAGAGACAAAGCTAAAAAAGAATGCCAATGGCTGAGTTTACCACAAAGCAGCAATCAAAGGCAACTAGGACTACTATCATCAGCAGCAGCGGCAGCACCTGGCGCCTCACTTGAGCTCGAAGAACCACTGCTAGTAACACATGCTCCTCGCTTCTTGCGCTCCTCTTCGTATTCAGGATCATCTGTGGGCAATTCAAACCTACAGACGGGACAAGAATTCCTTGAACCCAACCATTGAACTATACAATCATCATGGTAACCATGACCACAGGGCAAATTCTTAGCCATTTCGCCCACATTCACTACATCTTTACAAATGGCACATGCCATTACCTCCTGCTCTTCCTTGATCACCAATGTATTGAGACCCTCAATTGCACTCTTGGAAGCTGGTGGAGCTCCTCGTCTTCCACCACCATCACTCTCGGCTAGGGTTTGCAGTAAAGCTTCATAACCCTCTGCGT</gDNA_template>
            <first_frame> H  *  D  K  Q  I  I  T  F  K  K  C  G  E  G  G  I  T  L  E  N  N  H  Q  I  P  K  K  K  Q  E  T  K  L  K  K  N  A  N  G  *  V  Y  H  K  A  A  I  K  G  N  *  D  Y  Y  H  Q  Q  Q  R  Q  H  L  A  P  H  L  S  S  K  N  H  C  *  *  H  M  L  L  A  S  C  A  P  L  R  I  Q  D  H  L  W  A  I  Q  T  Y  R  R  D  K  N  S  L  N  P  T  I  E  L  Y  N  H  H  G  N  H  D  H  R  A  N  S  *  P  F  R  P  H  S  L  H  L  Y  K  W  H  M  P  L  P  P  A  L  P  *  S  P  M  Y  *  D  P  Q  L  H  S  W  K  L  V  E  L  L  V  F  H  H  H  H  S  R  L  G  F  A  V  K  L  H  N  P  L  R </first_frame>
            <second_frame>  I  K  I  N  R  L  L  H  S  R  N  A  E  R  V  E  L  H  W  K  T  I  T  K  Y  Q  K  R  S  K  R  Q  S  *  K  R  M  P  M  A  E  F  T  T  K  Q  Q  S  K  A  T  R  T  T  I  I  S  S  S  G  S  T  W  R  L  T  *  A  R  R  T  T  A  S  N  T  C  S  S  L  L  A  L  L  F  V  F  R  I  I  C  G  Q  F  K  P  T  D  G  T  R  I  P  *  T  Q  P  L  N  Y  T  I  I  M  V  T  M  T  T  G  Q  I  L  S  H  F  A  H  I  H  Y  I  F  T  N  G  T  C  H  Y  L  L  L  F  L  D  H  Q  C  I  E  T  L  N  C  T  L  G  S  W  W  S  S  S  S  S  T  T  I  T  L  G  *  G  L  Q  *  S  F  I  T  L  C   </second_frame>
            <third_frame>   L  R  *  T  D  Y  Y  I  Q  E  M  R  R  G  W  N  Y  T  G  K  Q  S  P  N  T  K  K  E  A  R  D  K  A  K  K  E  C  Q  W  L  S  L  P  Q  S  S  N  Q  R  Q  L  G  L  L  S  S  A  A  A  A  A  P  G  A  S  L  E  L  E  E  P  L  L  V  T  H  A  P  R  F  L  R  S  S  S  Y  S  G  S  S  V  G  N  S  N  L  Q  T  G  Q  E  F  L  E  P  N  H  *  T  I  Q  S  S  W  *  P  *  P  Q  G  K  F  L  A  I  S  P  T  F  T  T  S  L  Q  M  A  H  A  I  T  S  C  S  S  L  I  T  N  V  L  R  P  S  I  A  L  L  E  A  G  G  A  P  R  L  P  P  P  S  L  S  A  R  V  C  S  K  A  S  *  P  S  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0170H21.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="25514" stop="25828"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>312</number_coding_nucleotides>
                  <number_encoded_amino_acids>104</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TDYYIQEMRRGWNYTGKQSPNTKKEARDKAKKECQWLSLPQSSNQRQLGLLSSAAAAAPGASLELEEPLLVTHAPRFLRSSSYSGSSVGNSNLQTGQEFLEPNH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0170H21.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="25816" stop="26022"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TQPLNYTIIMVTMTTGQILSHFAHIHYIFTNGTCHYLLLFLDHQCIETLNCTLGSWWSSSSSTTITLG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="31534" PGL_stop="30872"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="31534" e_stop="30872"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.967"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.967">
            <gDNA_exon_boundary e_start="31534" e_stop="30872" e_length="663"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31534" stop="30872"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31533" stop="30976"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309833" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTTCCAATTATCCTTCAATCATAACACCAACTCCCTCTCCTTCATTCCAAAATTATCACTAACATTAATGGCTTCCACTTCAATATCTACAAGATTTTTCTTAATTTGTGTTGTTATTAATTTTTTTTCTTTATCACTAGCCTTACACATATCACCATCTTCTTCAATTTCAGCTGCCCCTGCATTGTTACCAAATCCACCTGCTCTGTCTCCTGATATAAGTCCTCTTTTTCCTTCACCAGGTGGCTCTGAGCTTGCTCCTACTGATTCTTCATTACCCTTAATTCCTTCTACCCCTAGCCCTCCTAATCCTGATGCTATGATTGCTCCTGGACCTCTTTATATGCCGTTTTCGCCTACGCAGTCTCTACCGGTGTCCTCTGCTGTTGCTCTGTTTTCATCTTTATGTACAATGGTGGTGTTGAGTTTGATGTCCACCTGGTTTACGCAGCTCCTTCGTGTGTGAAGGTTCAATGATGTTTGGTTGTGAGGTATTTTTGATGAAGTTTCACACTGATTTGTTTACTATGTTATGATTTATTTATGTACTATACTCTTGGTAGTGTATAATTTGTTTGTTGTATTACATTTTCATTGTCAAATAACAACGAAATAAGCACAATTTTTTTTTGTTTAGTTTATCTCAAGATCTGTATTTTGGTT</gDNA_template>
            <first_frame> L  P  I  I  L  Q  S  *  H  Q  L  P  L  L  H  S  K  I  I  T  N  I  N  G  F  H  F  N  I  Y  K  I  F  L  N  L  C  C  Y  *  F  F  F  F  I  T  S  L  T  H  I  T  I  F  F  N  F  S  C  P  C  I  V  T  K  S  T  C  S  V  S  *  Y  K  S  S  F  S  F  T  R  W  L  *  A  C  S  Y  *  F  F  I  T  L  N  S  F  Y  P  *  P  S  *  S  *  C  Y  D  C  S  W  T  S  L  Y  A  V  F  A  Y  A  V  S  T  G  V  L  C  C  C  S  V  F  I  F  M  Y  N  G  G  V  E  F  D  V  H  L  V  Y  A  A  P  S  C  V  K  V  Q  *  C  L  V  V  R  Y  F  *  *  S  F  T  L  I  C  L  L  C  Y  D  L  F  M  Y  Y  T  L  G  S  V  *  F  V  C  C  I  T  F  S  L  S  N  N  N  E  I  S  T  I  F  F  C  L  V  Y  L  K  I  C  I  L  V </first_frame>
            <second_frame>  F  Q  L  S  F  N  H  N  T  N  S  L  S  F  I  P  K  L  S  L  T  L  M  A  S  T  S  I  S  T  R  F  F  L  I  C  V  V  I  N  F  F  S  L  S  L  A  L  H  I  S  P  S  S  S  I  S  A  A  P  A  L  L  P  N  P  P  A  L  S  P  D  I  S  P  L  F  P  S  P  G  G  S  E  L  A  P  T  D  S  S  L  P  L  I  P  S  T  P  S  P  P  N  P  D  A  M  I  A  P  G  P  L  Y  M  P  F  S  P  T  Q  S  L  P  V  S  S  A  V  A  L  F  S  S  L  C  T  M  V  V  L  S  L  M  S  T  W  F  T  Q  L  L  R  V  *  R  F  N  D  V  W  L  *  G  I  F  D  E  V  S  H  *  F  V  Y  Y  V  M  I  Y  L  C  T  I  L  L  V  V  Y  N  L  F  V  V  L  H  F  H  C  Q  I  T  T  K  *  A  Q  F  F  F  V  *  F  I  S  R  S  V  F  W   </second_frame>
            <third_frame>   S  N  Y  P  S  I  I  T  P  T  P  S  P  S  F  Q  N  Y  H  *  H  *  W  L  P  L  Q  Y  L  Q  D  F  S  *  F  V  L  L  L  I  F  F  L  Y  H  *  P  Y  T  Y  H  H  L  L  Q  F  Q  L  P  L  H  C  Y  Q  I  H  L  L  C  L  L  I  *  V  L  F  F  L  H  Q  V  A  L  S  L  L  L  L  I  L  H  Y  P  *  F  L  L  P  L  A  L  L  I  L  M  L  *  L  L  L  D  L  F  I  C  R  F  R  L  R  S  L  Y  R  C  P  L  L  L  L  C  F  H  L  Y  V  Q  W  W  C  *  V  *  C  P  P  G  L  R  S  S  F  V  C  E  G  S  M  M  F  G  C  E  V  F  L  M  K  F  H  T  D  L  F  T  M  L  *  F  I  Y  V  L  Y  S  W  *  C  I  I  C  L  L  Y  Y  I  F  I  V  K  *  Q  R  N  K  H  N  F  F  L  F  S  L  S  Q  D  L  Y  F  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0170H21.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="31533" stop="31069"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>462</number_coding_nucleotides>
                  <number_encoded_amino_acids>154</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FQLSFNHNTNSLSFIPKLSLTLMASTSISTRFFLICVVINFFSLSLALHISPSSSISAAPALLPNPPALSPDISPLFPSPGGSELAPTDSSLPLIPSTPSPPNPDAMIAPGPLYMPFSPTQSLPVSSAVALFSSLCTMVVLSLMSTWFTQLLRV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="41003" PGL_stop="40042"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="41003" e_stop="40042"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.951"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.951">
            <gDNA_exon_boundary e_start="41003" e_stop="40042" e_length="962"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41003" stop="40327"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391540" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41002" stop="40449"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205808" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40998" stop="40546"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202657" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40954" stop="40373"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267707" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40597" stop="40189"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289962" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40521" stop="40042"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208613" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACGAGGATCTTCAATTCAAATCTGTCATATAGTGTGGATAGATAAATGGTTGGCCAAGTAAAATGCATAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATAATTATGCGATAGTATAACCGTAATATATCAAATACGGTTTGTGCCTTGGGGCATAAAGATTTATCACAAAAATCCTGACATTATTGGAGATGTTTTCTCTTTTGGTGGATGCAATGAGGTTTGTTTTGATCTGGCGAAATATGAAAACTTGAATGCATGTAATGAATAATTGTAATGTCTAGTTAGACAATGAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAACATATAAGAGTTTGAAAGAAACTTTTCCAATAAAGCTTCAAGAATCCTTATATGGATTGAAATTGTCAAGGAAGAAAAAGGGTACAAAAGAATGACCCTAATAGTCCTTGTATTTTTATGAAAAGGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAGATTGATAATTTGACAAATGAAATATTTGTCTAATAGTGCACATACACTGAAAAGTTTTGATGCAATTATATATGGATAAATCGCATTCATTGAGTACCCCAATGATTATGAGATCACTTGACATAAATGATGATTCAGTTTGATCTCAAAAGAAGGATGATGAGTTTCTTGGTGAAGAAACTCTATCTTGGTGCAATCAGGGCACTAGTGCATCTTACTAACAATATTTGACTAGATATTTGTTTTCCAGTAAATTTACTGGCAAGATTCAGTTTCTCCCCAATAAAAGGACATTGAAATGGTGTTGAACACATGATTGAATATCCTCGAAGGACCATAGTTATGGCTTATTCTATTCCAAGGAATCCAAGATAAAATTGATTGGTTATGCAGATGCAGAATATTTA</gDNA_template>
            <first_frame> T  R  I  F  N  S  N  L  S  Y  S  V  D  R  *  M  V  G  Q  V  K  C  I  I  Q  V  Y  F  V  S  L  R  K  V  T  F  W  T  G  S  P  *  I  K  V  *  C  Q  W  G  T  N  K  *  L  C  D  S  I  T  V  I  Y  Q  I  R  F  V  P  W  G  I  K  I  Y  H  K  N  P  D  I  I  G  D  V  F  S  F  G  G  C  N  E  V  C  F  D  L  A  K  Y  E  N  L  N  A  C  N  E  *  L  *  C  L  V  R  Q  *  R  L  Y  E  N  P  *  N  N  R  G  V  *  N  I  *  E  F  E  R  N  F  S  N  K  A  S  R  I  L  I  W  I  E  I  V  K  E  E  K  G  Y  K  R  M  T  L  I  V  L  V  F  L  *  K  G  L  G  K  T  K  F  C  L  D  L  Q  I  D  N  L  T  N  E  I  F  V  *  *  C  T  Y  T  E  K  F  *  C  N  Y  I  W  I  N  R  I  H  *  V  P  Q  *  L  *  D  H  L  T  *  M  M  I  Q  F  D  L  K  R  R  M  M  S  F  L  V  K  K  L  Y  L  G  A  I  R  A  L  V  H  L  T  N  N  I  *  L  D  I  C  F  P  V  N  L  L  A  R  F  S  F  S  P  I  K  G  H  *  N  G  V  E  H  M  I  E  Y  P  R  R  T  I  V  M  A  Y  S  I  P  R  N  P  R  *  N  *  L  V  M  Q  M  Q  N  I   </first_frame>
            <second_frame>  R  G  S  S  I  Q  I  C  H  I  V  W  I  D  K  W  L  A  K  *  N  A  *  F  K  Y  I  L  F  H  L  E  K  *  H  F  G  L  V  V  H  K  S  R  Y  N  V  S  G  V  Q  I  N  N  Y  A  I  V  *  P  *  Y  I  K  Y  G  L  C  L  G  A  *  R  F  I  T  K  I  L  T  L  L  E  M  F  S  L  L  V  D  A  M  R  F  V  L  I  W  R  N  M  K  T  *  M  H  V  M  N  N  C  N  V  *  L  D  N  E  G  Y  M  K  I  L  E  T  I  E  V  S  E  T  Y  K  S  L  K  E  T  F  P  I  K  L  Q  E  S  L  Y  G  L  K  L  S  R  K  K  K  G  T  K  E  *  P  *  *  S  L  Y  F  Y  E  K  V  L  V  R  Q  N  F  V  L  T  Y  R  L  I  I  *  Q  M  K  Y  L  S  N  S  A  H  T  L  K  S  F  D  A  I  I  Y  G  *  I  A  F  I  E  Y  P  N  D  Y  E  I  T  *  H  K  *  *  F  S  L  I  S  K  E  G  *  *  V  S  W  *  R  N  S  I  L  V  Q  S  G  H  *  C  I  L  L  T  I  F  D  *  I  F  V  F  Q  *  I  Y  W  Q  D  S  V  S  P  Q  *  K  D  I  E  M  V  L  N  T  *  L  N  I  L  E  G  P  *  L  W  L  I  L  F  Q  G  I  Q  D  K  I  D  W  L  C  R  C  R  I  F  </second_frame>
            <third_frame>   E  D  L  Q  F  K  S  V  I  *  C  G  *  I  N  G  W  P  S  K  M  H  N  S  S  I  F  C  F  T  *  K  S  D  I  L  D  W  *  S  I  N  Q  G  I  M  S  V  G  Y  K  *  I  I  M  R  *  Y  N  R  N  I  S  N  T  V  C  A  L  G  H  K  D  L  S  Q  K  S  *  H  Y  W  R  C  F  L  F  W  W  M  Q  *  G  L  F  *  S  G  E  I  *  K  L  E  C  M  *  *  I  I  V  M  S  S  *  T  M  K  V  I  *  K  S  L  K  Q  S  R  C  L  K  H  I  R  V  *  K  K  L  F  Q  *  S  F  K  N  P  Y  M  D  *  N  C  Q  G  R  K  R  V  Q  K  N  D  P  N  S  P  C  I  F  M  K  R  S  W  *  D  K  I  L  S  *  P  T  D  *  *  F  D  K  *  N  I  C  L  I  V  H  I  H  *  K  V  L  M  Q  L  Y  M  D  K  S  H  S  L  S  T  P  M  I  M  R  S  L  D  I  N  D  D  S  V  *  S  Q  K  K  D  D  E  F  L  G  E  E  T  L  S  W  C  N  Q  G  T  S  A  S  Y  *  Q  Y  L  T  R  Y  L  F  S  S  K  F  T  G  K  I  Q  F  L  P  N  K  R  T  L  K  W  C  *  T  H  D  *  I  S  S  K  D  H  S  Y  G  L  F  Y  S  K  E  S  K  I  K  L  I  G  Y  A  D  A  E  Y  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C09HBa0170H21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="40610" PGL_stop="41283"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="40610" e_stop="41283"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.926"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.926">
            <gDNA_exon_boundary e_start="40610" e_stop="41283" e_length="674"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40610" stop="41283"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273497" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40610" stop="41011"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273387" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTCAGACACCTCGATTGTTTCAAGGATTTTCATATAACCTTCATTGTCTAACTAGACATTACAATTATTCATTACATGCATTCAAGTTTTCATATTTCGCCAGATCAAAACAAACCTCATTGCATCCACCAAAAGAGAAAACATCTCCAATAATGTCAGGATTTTTGTGATAAATCTTTATGCCCCAAGGCACAAACCGTATTTGATATATTACGGTTATACTATCGCATAATTATTTATTTGTACCCCACTGACATTATACCTTGATTTATGGACTACCAGTCCAAAATGTCACTTTTCTAAGTGAAACAAAATATACTTGAATTATGCATTTTACTTGGCCAACCATTTATCTATCCACACTATATGACAGATTTGAATTGAAGATCCTCGTCACAATTTATATCATTGAGCGCTACCCATATCAAAGATACCGTCGACGGTTATTTGATATCCATTTCAACAAGACATAACTTATCGAGATCTCTTCATTTTTCATTATTTCAGGTACCTGAACCTTTTTCAAGATTTTATGAAGTGTTATGTCAATGTGCTCTTTTATAGCGCTTGCCTCATTATCATGACCATATTGATCATTTGCTCCTTCCTTCTTCAAGGAATTTCATATTTGGAATCGATTGGTCAATTACGCTTCCGGCGTATTATAAACTCTG</gDNA_template>
            <first_frame> F  R  H  L  D  C  F  K  D  F  H  I  T  F  I  V  *  L  D  I  T  I  I  H  Y  M  H  S  S  F  H  I  S  P  D  Q  N  K  P  H  C  I  H  Q  K  R  K  H  L  Q  *  C  Q  D  F  C  D  K  S  L  C  P  K  A  Q  T  V  F  D  I  L  R  L  Y  Y  R  I  I  I  Y  L  Y  P  T  D  I  I  P  *  F  M  D  Y  Q  S  K  M  S  L  F  *  V  K  Q  N  I  L  E  L  C  I  L  L  G  Q  P  F  I  Y  P  H  Y  M  T  D  L  N  *  R  S  S  S  Q  F  I  S  L  S  A  T  H  I  K  D  T  V  D  G  Y  L  I  S  I  S  T  R  H  N  L  S  R  S  L  H  F  S  L  F  Q  V  P  E  P  F  S  R  F  Y  E  V  L  C  Q  C  A  L  L  *  R  L  P  H  Y  H  D  H  I  D  H  L  L  L  P  S  S  R  N  F  I  F  G  I  D  W  S  I  T  L  P  A  Y  Y  K  L   </first_frame>
            <second_frame>  S  D  T  S  I  V  S  R  I  F  I  *  P  S  L  S  N  *  T  L  Q  L  F  I  T  C  I  Q  V  F  I  F  R  Q  I  K  T  N  L  I  A  S  T  K  R  E  N  I  S  N  N  V  R  I  F  V  I  N  L  Y  A  P  R  H  K  P  Y  L  I  Y  Y  G  Y  T  I  A  *  L  F  I  C  T  P  L  T  L  Y  L  D  L  W  T  T  S  P  K  C  H  F  S  K  *  N  K  I  Y  L  N  Y  A  F  Y  L  A  N  H  L  S  I  H  T  I  *  Q  I  *  I  E  D  P  R  H  N  L  Y  H  *  A  L  P  I  S  K  I  P  S  T  V  I  *  Y  P  F  Q  Q  D  I  T  Y  R  D  L  F  I  F  H  Y  F  R  Y  L  N  L  F  Q  D  F  M  K  C  Y  V  N  V  L  F  Y  S  A  C  L  I  I  M  T  I  L  I  I  C  S  F  L  L  Q  G  I  S  Y  L  E  S  I  G  Q  L  R  F  R  R  I  I  N  S  </second_frame>
            <third_frame>   Q  T  P  R  L  F  Q  G  F  S  Y  N  L  H  C  L  T  R  H  Y  N  Y  S  L  H  A  F  K  F  S  Y  F  A  R  S  K  Q  T  S  L  H  P  P  K  E  K  T  S  P  I  M  S  G  F  L  *  *  I  F  M  P  Q  G  T  N  R  I  *  Y  I  T  V  I  L  S  H  N  Y  L  F  V  P  H  *  H  Y  T  L  I  Y  G  L  P  V  Q  N  V  T  F  L  S  E  T  K  Y  T  *  I  M  H  F  T  W  P  T  I  Y  L  S  T  L  Y  D  R  F  E  L  K  I  L  V  T  I  Y  I  I  E  R  Y  P  Y  Q  R  Y  R  R  R  L  F  D  I  H  F  N  K  T  *  L  I  E  I  S  S  F  F  I  I  S  G  T  *  T  F  F  K  I  L  *  S  V  M  S  M  C  S  F  I  A  L  A  S  L  S  *  P  Y  *  S  F  A  P  S  F  F  K  E  F  H  I  W  N  R  L  V  N  Y  A  S  G  V  L  *  T  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0170H21.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="41061" stop="41282"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YPFQQDITYRDLFIFHYFRYLNLFQDFMKCYVNVLFYSACLIIMTILIICSFLLQGISYLESIGQLRFRRIINS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="44000" PGL_stop="43615"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="44000" e_stop="43615"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.930"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.930">
            <gDNA_exon_boundary e_start="44000" e_stop="43615" e_length="386"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44000" stop="43615"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338242" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTTATAACACGTTATCAGCACGTGTCTCTAGCCAATTAAGATTGAGTTTTAGTTTTTCTTTAACTCATGTTTTGGTTGATCTCGTTATGAGAATCAAGGTATTATATGCATAAATTAAGGTATGTATTTTCTAGAATATTTTTATGATTTAGAATAAAAATAGTATTCAGTCACTAACAATTATCACGAACCGAAGACATATACTATTATTGGTTGAATATTACATGCTATATAAAACTTCTTAAATTGAAGAAGTGTAAAATTTTAATAGCATGAGTTTGAATGTTATTTTGATTATTTTGAAAGACTCAAAGGGTGAGTCATGTTGTACTTCGGTCTATTATACCGTTGGTTAAGGGTAAGACGATGGATTCAAGTTTCATCG</gDNA_template>
            <first_frame> F  Y  N  T  L  S  A  R  V  S  S  Q  L  R  L  S  F  S  F  S  L  T  H  V  L  V  D  L  V  M  R  I  K  V  L  Y  A  *  I  K  V  C  I  F  *  N  I  F  M  I  *  N  K  N  S  I  Q  S  L  T  I  I  T  N  R  R  H  I  L  L  L  V  E  Y  Y  M  L  Y  K  T  S  *  I  E  E  V  *  N  F  N  S  M  S  L  N  V  I  L  I  I  L  K  D  S  K  G  E  S  C  C  T  S  V  Y  Y  T  V  G  *  G  *  D  D  G  F  K  F  H   </first_frame>
            <second_frame>  F  I  T  R  Y  Q  H  V  S  L  A  N  *  D  *  V  L  V  F  L  *  L  M  F  W  L  I  S  L  *  E  S  R  Y  Y  M  H  K  L  R  Y  V  F  S  R  I  F  L  *  F  R  I  K  I  V  F  S  H  *  Q  L  S  R  T  E  D  I  Y  Y  Y  W  L  N  I  T  C  Y  I  K  L  L  K  L  K  K  C  K  I  L  I  A  *  V  *  M  L  F  *  L  F  *  K  T  Q  R  V  S  H  V  V  L  R  S  I  I  P  L  V  K  G  K  T  M  D  S  S  F  I  </second_frame>
            <third_frame>   L  *  H  V  I  S  T  C  L  *  P  I  K  I  E  F  *  F  F  F  N  S  C  F  G  *  S  R  Y  E  N  Q  G  I  I  C  I  N  *  G  M  Y  F  L  E  Y  F  Y  D  L  E  *  K  *  Y  S  V  T  N  N  Y  H  E  P  K  T  Y  T  I  I  G  *  I  L  H  A  I  *  N  F  L  N  *  R  S  V  K  F  *  *  H  E  F  E  C  Y  F  D  Y  F  E  R  L  K  G  *  V  M  L  Y  F  G  L  L  Y  R  W  L  R  V  R  R  W  I  Q  V  S  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C09HBa0170H21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="67179" PGL_stop="55495"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="67179" e_stop="67140"/>
            <exon e_start="65822" e_stop="65778"/>
            <exon e_start="63361" e_stop="63254"/>
            <exon e_start="62653" e_stop="62576"/>
            <exon e_start="61734" e_stop="61668"/>
            <exon e_start="61448" e_stop="61390"/>
            <exon e_start="60922" e_stop="60823"/>
            <exon e_start="58779" e_stop="58700"/>
            <exon e_start="57754" e_stop="57698"/>
            <exon e_start="56047" e_stop="55944"/>
            <exon e_start="55545" e_stop="55495"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.964" acc_prob="0.902" e_score="1.000"/>
          <exon-intron don_prob="0.967" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.935" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.756" acc_prob="0.999" e_score="0.988"/>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="0.982"/>
          <exon-intron don_prob="0.994" acc_prob="0.995" e_score="0.971"/>
          <exon-only e_score="0.980"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="67179" e_stop="67140" e_length="40"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.999">
            <gDNA_intron_boundary i_start="67139" i_stop="65823" i_length="1317"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="65822" e_stop="65778" e_length="45"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="65777" i_stop="63362" i_length="2416"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="63361" e_stop="63254" e_length="108"/>
          </exon>
          <intron i_serial="3" don_prob="0.964" acc_prob="0.902">
            <gDNA_intron_boundary i_start="63253" i_stop="62654" i_length="600"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="62653" e_stop="62576" e_length="78"/>
          </exon>
          <intron i_serial="4" don_prob="0.967" acc_prob="0.992">
            <gDNA_intron_boundary i_start="62575" i_stop="61735" i_length="841"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="61734" e_stop="61668" e_length="67"/>
          </exon>
          <intron i_serial="5" don_prob="0.935" acc_prob="0.982">
            <gDNA_intron_boundary i_start="61667" i_stop="61449" i_length="219"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="61448" e_stop="61390" e_length="59"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="61389" i_stop="60923" i_length="467"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="60922" e_stop="60823" e_length="100"/>
          </exon>
          <intron i_serial="7" don_prob="0.983" acc_prob="0.985">
            <gDNA_intron_boundary i_start="60822" i_stop="58780" i_length="2043"/>
          </intron>
          <exon e_serial="8" e_score="0.988">
            <gDNA_exon_boundary e_start="58779" e_stop="58700" e_length="80"/>
          </exon>
          <intron i_serial="8" don_prob="0.756" acc_prob="0.999">
            <gDNA_intron_boundary i_start="58699" i_stop="57755" i_length="945"/>
          </intron>
          <exon e_serial="9" e_score="0.982">
            <gDNA_exon_boundary e_start="57754" e_stop="57698" e_length="57"/>
          </exon>
          <intron i_serial="9" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="57697" i_stop="56048" i_length="1650"/>
          </intron>
          <exon e_serial="10" e_score="0.971">
            <gDNA_exon_boundary e_start="56047" e_stop="55944" e_length="104"/>
          </exon>
          <intron i_serial="10" don_prob="0.994" acc_prob="0.995">
            <gDNA_intron_boundary i_start="55943" i_stop="55546" i_length="398"/>
          </intron>
          <exon e_serial="11" e_score="0.980">
            <gDNA_exon_boundary e_start="55545" e_stop="55495" e_length="51"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67179" stop="67140"/>
              <exon start="65822" stop="65778"/>
              <exon start="63361" stop="63254"/>
              <exon start="62653" stop="62576"/>
              <exon start="61734" stop="61668"/>
              <exon start="61448" stop="61390"/>
              <exon start="60922" stop="60823"/>
              <exon start="58779" stop="58700"/>
              <exon start="57754" stop="57698"/>
              <exon start="56047" stop="55944"/>
              <exon start="55545" stop="55495"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334585" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACTCCTGACGAATGCTCATTGTGTTGAACATGGTACCCAG : GTTAAAGTGAAGAGAAGGGGAGATGACACTAAATATGTTGCCAAG : GTTCTAGCTAGAGGAGTGGAGTGTGACATAGCCTTGCTATCTGTGGAAAGCAAGGACTTCTGGAAAGGAGCTGAACCCCTCTGCTTTGGACACTTGCCTCATCTGCAG : GATGCTGTAACTGTTGTAGGTTATCCACTTGGAGGAGATACCATTTCTGTGACAAAAGGGGTGGTATCAAGAGTAGAG : GTCACATCATATGCTCATGGATCATCTGAGCTTCTGGGCATTCAAATAGATGCAGCAATAAATCCTG : GTAATAGTGGGGGCCCTGCATTCAATGATGATGGAGAGTGCATAGGAGTGGCATTTCAG : GTTTACAGGTCAGATGACGTTGAGAATATTGGTTATGTTATCCCAGCCATGGTAGTGTCTCATTTTCTGGAAGACTACGAAAGGAACGGGAAGTACAGTG : GTTTTCCTTGCCTTGGGGTATTGTTGCAAAAATTGGAGAATCCAGCACTACGTGCCTGCTTGAGAGTTCCTTCGAATGAG : GGCGTACTCGTACGGAAAATCGAGCCTACTTCTGATGTTAGCAATGTCGTGAAAGAG : GGCGACGTGATTGTTAGCTTTGATGGTGTTCGTGTCGGGTGTGAAGGGACAGTGCCATTTCGATCAAGTGAACGCATTGCGTTTCGCTATCTCATCAGTCAAAA : GTTCACTGGTGATGTAGCTGAACTTGGTATTATTAGAGCTGGGGAATTCCT</gDNA_template>
            <first_frame> T  P  D  E  C  S  L  C  *  T  W  Y  P   : G  *  S  E  E  K  G  R  *  H  *  I  C  C  Q   : G  S  S  *  R  S  G  V  *  H  S  L  A  I  C  G  K  Q  G  L  L  E  R  S  *  T  P  L  L  W  T  L  A  S  S  A   : G  C  C  N  C  C  R  L  S  T  W  R  R  Y  H  F  C  D  K  R  G  G  I  K  S  R   : G  H  I  I  C  S  W  I  I  *  A  S  G  H  S  N  R  C  S  N  K  S  W :   *  *  W  G  P  C  I  Q  *  *  W  R  V  H  R  S  G  I  S   : G  L  Q  V  R  *  R  *  E  Y  W  L  C  Y  P  S  H  G  S  V  S  F  S  G  R  L  R  K  E  R  E  V  Q  W :   F  S  L  P  W  G  I  V  A  K  I  G  E  S  S  T  T  C  L  L  E  S  S  F  E  *   : G  R  T  R  T  E  N  R  A  Y  F  *  C  *  Q  C  R  E  R   : G  R  R  D  C  *  L  *  W  C  S  C  R  V  *  R  D  S  A  I  S  I  K  *  T  H  C  V  S  L  S  H  Q  S  K  :  V  H  W  *  C  S  *  T  W  Y  Y  *  S  W  G  I  P </first_frame>
            <second_frame>  L  L  T  N  A  H  C  V  E  H  G  T  Q  :  V  K  V  K  R  R  G  D  D  T  K  Y  V  A  K  :  V  L  A  R  G  V  E  C  D  I  A  L  L  S  V  E  S  K  D  F  W  K  G  A  E  P  L  C  F  G  H  L  P  H  L  Q  :  D  A  V  T  V  V  G  Y  P  L  G  G  D  T  I  S  V  T  K  G  V  V  S  R  V  E  :  V  T  S  Y  A  H  G  S  S  E  L  L  G  I  Q  I  D  A  A  I  N  P   : G  N  S  G  G  P  A  F  N  D  D  G  E  C  I  G  V  A  F  Q  :  V  Y  R  S  D  D  V  E  N  I  G  Y  V  I  P  A  M  V  V  S  H  F  L  E  D  Y  E  R  N  G  K  Y  S   : G  F  P  C  L  G  V  L  L  Q  K  L  E  N  P  A  L  R  A  C  L  R  V  P  S  N  E  :  G  V  L  V  R  K  I  E  P  T  S  D  V  S  N  V  V  K  E  :  G  D  V  I  V  S  F  D  G  V  R  V  G  C  E  G  T  V  P  F  R  S  S  E  R  I  A  F  R  Y  L  I  S  Q  K :   F  T  G  D  V  A  E  L  G  I  I  R  A  G  E  F   </second_frame>
            <third_frame>   S  *  R  M  L  I  V  L  N  M  V  P  R :   L  K  *  R  E  G  E  M  T  L  N  M  L  P  R :   F  *  L  E  E  W  S  V  T  *  P  C  Y  L  W  K  A  R  T  S  G  K  E  L  N  P  S  A  L  D  T  C  L  I  C  R :   M  L  *  L  L  *  V  I  H  L  E  E  I  P  F  L  *  Q  K  G  W  Y  Q  E  *  R :   S  H  H  M  L  M  D  H  L  S  F  W  A  F  K  *  M  Q  Q  *  I  L  :  V  I  V  G  A  L  H  S  M  M  M  E  S  A  *  E  W  H  F  R :   F  T  G  Q  M  T  L  R  I  L  V  M  L  S  Q  P  W  *  C  L  I  F  W  K  T  T  K  G  T  G  S  T  V  :  V  F  L  A  L  G  Y  C  C  K  N  W  R  I  Q  H  Y  V  P  A  *  E  F  L  R  M  R :   A  Y  S  Y  G  K  S  S  L  L  L  M  L  A  M  S  *  K  R :   A  T  *  L  L  A  L  M  V  F  V  S  G  V  K  G  Q  C  H  F  D  Q  V  N  A  L  R  F  A  I  S  S  V  K   : S  S  L  V  M  *  L  N  L  V  L  L  E  L  G  N  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0170H21.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67178" stop="67140"/>
                    <exon start="65822" stop="65778"/>
                    <exon start="63361" stop="63254"/>
                    <exon start="62653" stop="62576"/>
                    <exon start="61734" stop="61668"/>
                    <exon start="61448" stop="61390"/>
                    <exon start="60922" stop="60823"/>
                    <exon start="58779" stop="58700"/>
                    <exon start="57754" stop="57698"/>
                    <exon start="56047" stop="55944"/>
                    <exon start="55545" stop="55497"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>786</number_coding_nucleotides>
                  <number_encoded_amino_acids>262</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLTNAHCVEHGTQVKVKRRGDDTKYVAKVLARGVECDIALLSVESKDFWKGAEPLCFGHLPHLQDAVTVVGYPLGGDTISVTKGVVSRVEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDDGECIGVAFQVYRSDDVENIGYVIPAMVVSHFLEDYERNGKYSGFPCLGVLLQKLENPALRACLRVPSNEGVLVRKIEPTSDVSNVVKEGDVIVSFDGVRVGCEGTVPFRSSERIAFRYLISQKFTGDVAELGIIRAGEF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="76022" PGL_stop="73465"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="76022" e_stop="75941"/>
            <exon e_start="75464" e_stop="75399"/>
            <exon e_start="74268" e_stop="74009"/>
            <exon e_start="73925" e_stop="73465"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.799" e_score="1.000"/>
          <exon-intron don_prob="0.232" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="76022" e_stop="75941" e_length="82"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="75940" i_stop="75465" i_length="476"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="75464" e_stop="75399" e_length="66"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.799">
            <gDNA_intron_boundary i_start="75398" i_stop="74269" i_length="1130"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="74268" e_stop="74009" e_length="260"/>
          </exon>
          <intron i_serial="3" don_prob="0.232" acc_prob="0.999">
            <gDNA_intron_boundary i_start="74008" i_stop="73926" i_length="83"/>
          </intron>
          <exon e_serial="4" e_score="0.989">
            <gDNA_exon_boundary e_start="73925" e_stop="73465" e_length="461"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76022" stop="75941"/>
              <exon start="75464" stop="75399"/>
              <exon start="74268" stop="74009"/>
              <exon start="73925" stop="73465"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E730807" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76019" stop="75941"/>
              <exon start="75464" stop="75399"/>
              <exon start="74268" stop="74009"/>
              <exon start="73925" stop="73576"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317217" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76019" stop="75941"/>
              <exon start="75464" stop="75399"/>
              <exon start="74268" stop="74009"/>
              <exon start="73925" stop="73660"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322393" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75969" stop="75941"/>
              <exon start="75464" stop="75399"/>
              <exon start="74268" stop="74009"/>
              <exon start="73925" stop="73482"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E546541" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75967" stop="75941"/>
              <exon start="75464" stop="75399"/>
              <exon start="74268" stop="74009"/>
              <exon start="73925" stop="73633"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E359431" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAGAAATATTTCTAATTAGATTTCTCTGAAAACTACATCTAACTGAAGAAGAAGAAGCCAACATGCTGAGATTAGCTTCAAG : GGGCGGCATCAAATCCAGGGGCCTACTTCAAACTTTCAATAAAGACTTCTCCACTCACATTGAGAG : AAAACTTGAAGGCAAGGTGGCGCTGATCACCGGAGCAGCAAGTGGAATCGGAAAAGAAACCGCCGCGAAATTCATCAACAACGGTGCCAAAGTTGTAATAGCAGATGTACAAAATCAGGTCGGCCAAGAAACTGCCTCGGAGCTGGGGCCAAACGCCTCTTTTGTGGTCTGCGATGTCACAAAAGAATCCGACGTCTCCAATGCAGTGGATTTCACCATCTCCAGCCACGGAAAACTCGACATTATGTACAACAATGCAG : GTATACCATGTTGTACTCCACGTTCCATAGCTGATCTTGACCTCGATGCATTTGATAGAGTCATGGCTATCAACGTCCGTGGGGTGATAGCAGGGATTAAACACGCAGCTCGAGTGATGATCCCACGTAAAACCGGTTCCATATTGTGCACAGCTAGTGTCACAGGGGTGATAGGAGGTCTAGCGCAACCTACATATTCGACAACCAAATCCTGTGTGATCGGAATCATGAGATCAGTTACAGCAGAACTAAGTCAGAACGGAATCAGAATCAATTGTGTATCGCCCTTTGCAATTCCAACTCCGTTCTATATGGATGAGATAAAATTGCATTTCCCGAAATTGGAACCTGAAGTTCTTGTTAAAATGTTGCATCGCACTAGTGAATTGAAAGGAGCCTACTGTGAGCCAATTGATGTGGCTAATGCTGCTCTGTTTTTAGCTAGTGATGATGCCAAGTAT</gDNA_template>
            <first_frame> E  K  Y  F  *  L  D  F  S  E  N  Y  I  *  L  K  K  K  K  P  T  C  *  D  *  L  Q   : G  A  A  S  N  P  G  A  Y  F  K  L  S  I  K  T  S  P  L  T  L  R   : E  N  L  K  A  R  W  R  *  S  P  E  Q  Q  V  E  S  E  K  K  P  P  R  N  S  S  T  T  V  P  K  L  *  *  Q  M  Y  K  I  R  S  A  K  K  L  P  R  S  W  G  Q  T  P  L  L  W  S  A  M  S  Q  K  N  P  T  S  P  M  Q  W  I  S  P  S  P  A  T  E  N  S  T  L  C  T  T  M  Q  :  V  Y  H  V  V  L  H  V  P  *  L  I  L  T  S  M  H  L  I  E  S  W  L  S  T  S  V  G  *  *  Q  G  L  N  T  Q  L  E  *  *  S  H  V  K  P  V  P  Y  C  A  Q  L  V  S  Q  G  *  *  E  V  *  R  N  L  H  I  R  Q  P  N  P  V  *  S  E  S  *  D  Q  L  Q  Q  N  *  V  R  T  E  S  E  S  I  V  Y  R  P  L  Q  F  Q  L  R  S  I  W  M  R  *  N  C  I  S  R  N  W  N  L  K  F  L  L  K  C  C  I  A  L  V  N  *  K  E  P  T  V  S  Q  L  M  W  L  M  L  L  C  F  *  L  V  M  M  P  S   </first_frame>
            <second_frame>  R  N  I  S  N  *  I  S  L  K  T  T  S  N  *  R  R  R  S  Q  H  A  E  I  S  F  K  :  G  R  H  Q  I  Q  G  P  T  S  N  F  Q  *  R  L  L  H  S  H  *  E  :  K  T  *  R  Q  G  G  A  D  H  R  S  S  K  W  N  R  K  R  N  R  R  E  I  H  Q  Q  R  C  Q  S  C  N  S  R  C  T  K  S  G  R  P  R  N  C  L  G  A  G  A  K  R  L  F  C  G  L  R  C  H  K  R  I  R  R  L  Q  C  S  G  F  H  H  L  Q  P  R  K  T  R  H  Y  V  Q  Q  C  R :   Y  T  M  L  Y  S  T  F  H  S  *  S  *  P  R  C  I  *  *  S  H  G  Y  Q  R  P  W  G  D  S  R  D  *  T  R  S  S  S  D  D  P  T  *  N  R  F  H  I  V  H  S  *  C  H  R  G  D  R  R  S  S  A  T  Y  I  F  D  N  Q  I  L  C  D  R  N  H  E  I  S  Y  S  R  T  K  S  E  R  N  Q  N  Q  L  C  I  A  L  C  N  S  N  S  V  L  Y  G  *  D  K  I  A  F  P  E  I  G  T  *  S  S  C  *  N  V  A  S  H  *  *  I  E  R  S  L  L  *  A  N  *  C  G  *  C  C  S  V  F  S  *  *  *  C  Q  V  </second_frame>
            <third_frame>   E  I  F  L  I  R  F  L  *  K  L  H  L  T  E  E  E  E  A  N  M  L  R  L  A  S  R :   G  G  I  K  S  R  G  L  L  Q  T  F  N  K  D  F  S  T  H  I  E  R :   K  L  E  G  K  V  A  L  I  T  G  A  A  S  G  I  G  K  E  T  A  A  K  F  I  N  N  G  A  K  V  V  I  A  D  V  Q  N  Q  V  G  Q  E  T  A  S  E  L  G  P  N  A  S  F  V  V  C  D  V  T  K  E  S  D  V  S  N  A  V  D  F  T  I  S  S  H  G  K  L  D  I  M  Y  N  N  A   : G  I  P  C  C  T  P  R  S  I  A  D  L  D  L  D  A  F  D  R  V  M  A  I  N  V  R  G  V  I  A  G  I  K  H  A  A  R  V  M  I  P  R  K  T  G  S  I  L  C  T  A  S  V  T  G  V  I  G  G  L  A  Q  P  T  Y  S  T  T  K  S  C  V  I  G  I  M  R  S  V  T  A  E  L  S  Q  N  G  I  R  I  N  C  V  S  P  F  A  I  P  T  P  F  Y  M  D  E  I  K  L  H  F  P  K  L  E  P  E  V  L  V  K  M  L  H  R  T  S  E  L  K  G  A  Y  C  E  P  I  D  V  A  N  A  A  L  F  L  A  S  D  D  A  K  Y </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0170H21.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75993" stop="75941"/>
                    <exon start="75464" stop="75399"/>
                    <exon start="74268" stop="74009"/>
                    <exon start="73925" stop="73465"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>840</number_coding_nucleotides>
                  <number_encoded_amino_acids>280</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KLHLTEEEEANMLRLASRGGIKSRGLLQTFNKDFSTHIERKLEGKVALITGAASGIGKETAAKFINNGAKVVIADVQNQVGQETASELGPNASFVVCDVTKESDVSNAVDFTISSHGKLDIMYNNAGIPCCTPRSIADLDLDAFDRVMAINVRGVIAGIKHAARVMIPRKTGSILCTASVTGVIGGLAQPTYSTTKSCVIGIMRSVTAELSQNGIRINCVSPFAIPTPFYMDEIKLHFPKLEPEVLVKMLHRTSELKGAYCEPIDVANAALFLASDDAKY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="84025" PGL_stop="93242"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="84025" e_stop="84388"/>
            <exon e_start="85052" e_stop="85198"/>
            <exon e_start="85505" e_stop="85723"/>
            <exon e_start="85866" e_stop="85930"/>
            <exon e_start="87447" e_stop="87512"/>
            <exon e_start="87630" e_stop="87692"/>
            <exon e_start="89680" e_stop="89742"/>
            <exon e_start="90417" e_stop="90486"/>
            <exon e_start="91898" e_stop="91981"/>
            <exon e_start="92785" e_stop="93242"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.596" acc_prob="0.970" e_score="0.997"/>
          <exon-intron don_prob="0.813" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.886" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.934" acc_prob="0.896" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.818" acc_prob="0.937" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.971" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="84025" e_stop="84388" e_length="364"/>
          </exon>
          <intron i_serial="1" don_prob="0.596" acc_prob="0.970">
            <gDNA_intron_boundary i_start="84389" i_stop="85051" i_length="663"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="85052" e_stop="85198" e_length="147"/>
          </exon>
          <intron i_serial="2" don_prob="0.813" acc_prob="0.993">
            <gDNA_intron_boundary i_start="85199" i_stop="85504" i_length="306"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="85505" e_stop="85723" e_length="219"/>
          </exon>
          <intron i_serial="3" don_prob="0.886" acc_prob="0.999">
            <gDNA_intron_boundary i_start="85724" i_stop="85865" i_length="142"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="85866" e_stop="85930" e_length="65"/>
          </exon>
          <intron i_serial="4" don_prob="0.934" acc_prob="0.896">
            <gDNA_intron_boundary i_start="85931" i_stop="87446" i_length="1516"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="87447" e_stop="87512" e_length="66"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.993">
            <gDNA_intron_boundary i_start="87513" i_stop="87629" i_length="117"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="87630" e_stop="87692" e_length="63"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.981">
            <gDNA_intron_boundary i_start="87693" i_stop="89679" i_length="1987"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="89680" e_stop="89742" e_length="63"/>
          </exon>
          <intron i_serial="7" don_prob="0.818" acc_prob="0.937">
            <gDNA_intron_boundary i_start="89743" i_stop="90416" i_length="674"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="90417" e_stop="90486" e_length="70"/>
          </exon>
          <intron i_serial="8" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="90487" i_stop="91897" i_length="1411"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="91898" e_stop="91981" e_length="84"/>
          </exon>
          <intron i_serial="9" don_prob="0.971" acc_prob="0.994">
            <gDNA_intron_boundary i_start="91982" i_stop="92784" i_length="803"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="92785" e_stop="93242" e_length="458"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84025" stop="84388"/>
              <exon start="85052" stop="85198"/>
              <exon start="85505" stop="85723"/>
              <exon start="85866" stop="85930"/>
              <exon start="87447" stop="87512"/>
              <exon start="87630" stop="87692"/>
              <exon start="89680" stop="89742"/>
              <exon start="90417" stop="90486"/>
              <exon start="91898" stop="91981"/>
              <exon start="92785" stop="93242"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745554" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84059" stop="84388"/>
              <exon start="85052" stop="85198"/>
              <exon start="85505" stop="85535"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244375" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84081" stop="84388"/>
              <exon start="85052" stop="85198"/>
              <exon start="85505" stop="85570"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249437" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84095" stop="84388"/>
              <exon start="85052" stop="85152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303508" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87464" stop="87512"/>
              <exon start="87630" stop="87692"/>
              <exon start="89680" stop="89742"/>
              <exon start="90417" stop="90486"/>
              <exon start="91898" stop="91981"/>
              <exon start="92785" stop="93135"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E725267" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91931" stop="91981"/>
              <exon start="92785" stop="93145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357796" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAACCAAAAGAGAAGCGGAAAATAATAATACATCCGCCCCTAGTGACCGCAGTCATCTAAACCCTCCACCAATCACGGCGGCGCGTATACTATCCTGAACTATCATCCTATCTGCTCCGCCACTTAAGTGGGCAATACAGAGGTTTGCAACCACAGCTCCACCGTTTTTACTATGAATTTTGAGGATGAGAATTTTGAACTGAGAGAGATTCAGAGGCTTGAAGGCCACACCGATAAGGTTTGGAGCGTCGCTTGGAAACCGGCTACCGGAATCAATGGTGTTTCAGCTGTATTTGCTTCCTGCAGCGGCGATAAAACCGTACGAATCTGGGAAGAGGACTCCACAGGCTCTTTCCAGTGTCAG : GCTGTTTTGGAGGAAACACATACACGGACTGTTAGATCATGTGCATGGTCACCGTCGGGCAAATTTTTGGCAACAGCTAGCTTTGATGCCACCACTGCTATTTGGGAAAATGTTGGGGTTGACTTTGAGTGTGTCTCCACGTTGGAG : GGTCATGACAATGAAGTGAAAAGCGTTTCTTGGAATAATTCGGGCTCACTGCTTGCGACATGTGGACGAGATAAGTCGGTTTGGATATGGGAAGTGTTGCCTGGAAATGAGTTTGACTGTGTTTCAGTGTTACTAGGCCACACACAAGATGTTAAGATGGTTCAGTGGAATCCATCTATGGATACTTTGTTCTCATGTAGTTATGATAACACCATTAAG : GTTTGGATAGAGGATGGCGATAGTGATGATTGGCATTGTATTCAAACTTTGGGTGAATCTAATAG : TGGACATACATCTACTGTCTGGTCTCTCTCTTTCGATGCTAGTGGAGACAAAATGGTTTCTTGCAG : TGATGACCTTACCATTAAGGTATGGACTAGCAAAATGCAGGAAGGGGATCAAAATGCACCTTG : GGAACATGTCTGCACCCTATCTGGATATCATGATAGGACAATTTTCTCAGTTCATTGGTCAAG : GGAAGGAATAATTGCTAGTGGAGCAGCTGATGACGCTATATGTTTATTTGTTGAGAATAATGACAATGAG : GTTGAGGGACCTTCATTTAAACTACTTCTGAAGAAAGAGAAGGCTCATGAAATGGATGTAAATTCTGTGCAATGGAACTCTGGG : GATAGGAGGCTTCTTGCTTCGGCCAGTGATGATGGGACTGTGAAGATATGGGAGTTGGTTCGTCTCTCTGGACAGAAGTTGCTGTGAACATAGCTTCACAGCGGATATTAGAAAGCAATGCACATCATTTTCCGATGTAGAAACGTAATTTACAGTCATTTCGAGCCTTTATGAAGTCTTCCAGAAAATGTTAGCTTTAGAAATGTGTTTGGAACAAAGTGTTAGCTTTAGGCTTTAGAACTGGGTGTGGAACACACATATTGAGATATTGACATGTTGAGAACCTCCAGCATTTATAAGTTTGTTTTTGAAAAATATATTGTAATGAGTAAAGAAGATATTTGGAATTCTCAATTAATAGGCTAAAAATAGTAAACTCACTATAGTAACTAATCAATATTTTCTTAATAGGTGTGTAAAATTTAAATTTGACAAGTAAAAAAAGATCGAGGGAGTTT</gDNA_template>
            <first_frame> Q  P  K  E  K  R  K  I  I  I  H  P  P  L  V  T  A  V  I  *  T  L  H  Q  S  R  R  R  V  Y  Y  P  E  L  S  S  Y  L  L  R  H  L  S  G  Q  Y  R  G  L  Q  P  Q  L  H  R  F  Y  Y  E  F  *  G  *  E  F  *  T  E  R  D  S  E  A  *  R  P  H  R  *  G  L  E  R  R  L  E  T  G  Y  R  N  Q  W  C  F  S  C  I  C  F  L  Q  R  R  *  N  R  T  N  L  G  R  G  L  H  R  L  F  P  V  S   : G  C  F  G  G  N  T  Y  T  D  C  *  I  M  C  M  V  T  V  G  Q  I  F  G  N  S  *  L  *  C  H  H  C  Y  L  G  K  C  W  G  *  L  *  V  C  L  H  V  G   : G  S  *  Q  *  S  E  K  R  F  L  E  *  F  G  L  T  A  C  D  M  W  T  R  *  V  G  L  D  M  G  S  V  A  W  K  *  V  *  L  C  F  S  V  T  R  P  H  T  R  C  *  D  G  S  V  E  S  I  Y  G  Y  F  V  L  M  *  L  *  *  H  H  *   : G  L  D  R  G  W  R  *  *  *  L  A  L  Y  S  N  F  G  *  I  *  *  :  W  T  Y  I  Y  C  L  V  S  L  F  R  C  *  W  R  Q  N  G  F  L  Q  :  *  *  P  Y  H  *  G  M  D  *  Q  N  A  G  R  G  S  K  C  T  L  :  G  T  C  L  H  P  I  W  I  S  *  *  D  N  F  L  S  S  L  V  K  :  G  R  N  N  C  *  W  S  S  *  *  R  Y  M  F  I  C  *  E  *  *  Q  *   : G  *  G  T  F  I  *  T  T  S  E  E  R  E  G  S  *  N  G  C  K  F  C  A  M  E  L  W   : G  *  E  A  S  C  F  G  Q  *  *  W  D  C  E  D  M  G  V  G  S  S  L  W  T  E  V  A  V  N  I  A  S  Q  R  I  L  E  S  N  A  H  H  F  P  M  *  K  R  N  L  Q  S  F  R  A  F  M  K  S  S  R  K  C  *  L  *  K  C  V  W  N  K  V  L  A  L  G  F  R  T  G  C  G  T  H  I  L  R  Y  *  H  V  E  N  L  Q  H  L  *  V  C  F  *  K  I  Y  C  N  E  *  R  R  Y  L  E  F  S  I  N  R  L  K  I  V  N  S  L  *  *  L  I  N  I  F  L  I  G  V  *  N  L  N  L  T  S  K  K  R  S  R  E  F </first_frame>
            <second_frame>  N  Q  K  R  S  G  K  *  *  Y  I  R  P  *  *  P  Q  S  S  K  P  S  T  N  H  G  G  A  Y  T  I  L  N  Y  H  P  I  C  S  A  T  *  V  G  N  T  E  V  C  N  H  S  S  T  V  F  T  M  N  F  E  D  E  N  F  E  L  R  E  I  Q  R  L  E  G  H  T  D  K  V  W  S  V  A  W  K  P  A  T  G  I  N  G  V  S  A  V  F  A  S  C  S  G  D  K  T  V  R  I  W  E  E  D  S  T  G  S  F  Q  C  Q  :  A  V  L  E  E  T  H  T  R  T  V  R  S  C  A  W  S  P  S  G  K  F  L  A  T  A  S  F  D  A  T  T  A  I  W  E  N  V  G  V  D  F  E  C  V  S  T  L  E  :  G  H  D  N  E  V  K  S  V  S  W  N  N  S  G  S  L  L  A  T  C  G  R  D  K  S  V  W  I  W  E  V  L  P  G  N  E  F  D  C  V  S  V  L  L  G  H  T  Q  D  V  K  M  V  Q  W  N  P  S  M  D  T  L  F  S  C  S  Y  D  N  T  I  K  :  V  W  I  E  D  G  D  S  D  D  W  H  C  I  Q  T  L  G  E  S  N  S :   G  H  T  S  T  V  W  S  L  S  F  D  A  S  G  D  K  M  V  S  C  S :   D  D  L  T  I  K  V  W  T  S  K  M  Q  E  G  D  Q  N  A  P  W :   E  H  V  C  T  L  S  G  Y  H  D  R  T  I  F  S  V  H  W  S  R :   E  G  I  I  A  S  G  A  A  D  D  A  I  C  L  F  V  E  N  N  D  N  E  :  V  E  G  P  S  F  K  L  L  L  K  K  E  K  A  H  E  M  D  V  N  S  V  Q  W  N  S  G  :  D  R  R  L  L  A  S  A  S  D  D  G  T  V  K  I  W  E  L  V  R  L  S  G  Q  K  L  L  *  T  *  L  H  S  G  Y  *  K  A  M  H  I  I  F  R  C  R  N  V  I  Y  S  H  F  E  P  L  *  S  L  P  E  N  V  S  F  R  N  V  F  G  T  K  C  *  L  *  A  L  E  L  G  V  E  H  T  Y  *  D  I  D  M  L  R  T  S  S  I  Y  K  F  V  F  E  K  Y  I  V  M  S  K  E  D  I  W  N  S  Q  L  I  G  *  K  *  *  T  H  Y  S  N  *  S  I  F  S  *  *  V  C  K  I  *  I  *  Q  V  K  K  D  R  G  S   </second_frame>
            <third_frame>   T  K  R  E  A  E  N  N  N  T  S  A  P  S  D  R  S  H  L  N  P  P  P  I  T  A  A  R  I  L  S  *  T  I  I  L  S  A  P  P  L  K  W  A  I  Q  R  F  A  T  T  A  P  P  F  L  L  *  I  L  R  M  R  I  L  N  *  E  R  F  R  G  L  K  A  T  P  I  R  F  G  A  S  L  G  N  R  L  P  E  S  M  V  F  Q  L  Y  L  L  P  A  A  A  I  K  P  Y  E  S  G  K  R  T  P  Q  A  L  S  S  V  R :   L  F  W  R  K  H  I  H  G  L  L  D  H  V  H  G  H  R  R  A  N  F  W  Q  Q  L  A  L  M  P  P  L  L  F  G  K  M  L  G  L  T  L  S  V  S  P  R  W  R :   V  M  T  M  K  *  K  A  F  L  G  I  I  R  A  H  C  L  R  H  V  D  E  I  S  R  F  G  Y  G  K  C  C  L  E  M  S  L  T  V  F  Q  C  Y  *  A  T  H  K  M  L  R  W  F  S  G  I  H  L  W  I  L  C  S  H  V  V  M  I  T  P  L  R :   F  G  *  R  M  A  I  V  M  I  G  I  V  F  K  L  W  V  N  L  I   : V  D  I  H  L  L  S  G  L  S  L  S  M  L  V  E  T  K  W  F  L  A   : V  M  T  L  P  L  R  Y  G  L  A  K  C  R  K  G  I  K  M  H  L   : G  N  M  S  A  P  Y  L  D  I  M  I  G  Q  F  S  Q  F  I  G  Q   : G  K  E  *  L  L  V  E  Q  L  M  T  L  Y  V  Y  L  L  R  I  M  T  M  R :   L  R  D  L  H  L  N  Y  F  *  R  K  R  R  L  M  K  W  M  *  I  L  C  N  G  T  L  G :   I  G  G  F  L  L  R  P  V  M  M  G  L  *  R  Y  G  S  W  F  V  S  L  D  R  S  C  C  E  H  S  F  T  A  D  I  R  K  Q  C  T  S  F  S  D  V  E  T  *  F  T  V  I  S  S  L  Y  E  V  F  Q  K  M  L  A  L  E  M  C  L  E  Q  S  V  S  F  R  L  *  N  W  V  W  N  T  H  I  E  I  L  T  C  *  E  P  P  A  F  I  S  L  F  L  K  N  I  L  *  *  V  K  K  I  F  G  I  L  N  *  *  A  K  N  S  K  L  T  I  V  T  N  Q  Y  F  L  N  R  C  V  K  F  K  F  D  K  *  K  K  I  E  G  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0170H21.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="84152" stop="84388"/>
                    <exon start="85052" stop="85198"/>
                    <exon start="85505" stop="85723"/>
                    <exon start="85866" stop="85930"/>
                    <exon start="87447" stop="87512"/>
                    <exon start="87630" stop="87692"/>
                    <exon start="89680" stop="89742"/>
                    <exon start="90417" stop="90486"/>
                    <exon start="91898" stop="91981"/>
                    <exon start="92785" stop="92871"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1098</number_coding_nucleotides>
                  <number_encoded_amino_acids>366</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VGNTEVCNHSSTVFTMNFEDENFELREIQRLEGHTDKVWSVAWKPATGINGVSAVFASCSGDKTVRIWEEDSTGSFQCQAVLEETHTRTVRSCAWSPSGKFLATASFDATTAIWENVGVDFECVSTLEGHDNEVKSVSWNNSGSLLATCGRDKSVWIWEVLPGNEFDCVSVLLGHTQDVKMVQWNPSMDTLFSCSYDNTIKVWIEDGDSDDWHCIQTLGESNSGHTSTVWSLSFDASGDKMVSCSDDLTIKVWTSKMQEGDQNAPWEHVCTLSGYHDRTIFSVHWSREGIIASGAADDAICLFVENNDNEVEGPSFKLLLKKEKAHEMDVNSVQWNSGDRRLLASASDDGTVKIWELVRLSGQKLL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="115204" PGL_stop="115829"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="115204" e_stop="115829"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.939"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.939">
            <gDNA_exon_boundary e_start="115204" e_stop="115829" e_length="626"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115204" stop="115829"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E691072" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115207" stop="115829"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E691071" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115207" stop="115816"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E694912" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115207" stop="115816"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E694911" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGAGCATATCCACCGACGGAGAGATTCAACAGTGAAAATAGAAGAGCATATTCACCAACGGGGAGATTCAGCAGTGAACCTGAAAGAGCATATCCACCAACGGTGAGATTCCACACTGAAAGTGAAAGAGCATATCCACCAACGTGGAGATTAAACAGTGAAAATGAAAGAGCATATCCACCATATGCTCCTCAATTACCACCAGACTACGGCTTGAAATATCACCATGTTGGGGATGAGCCTAGGTACCCAACTTTAGTCTCATCTCGCTATTCCCTTAGGGAACCTTCTGCACCTCGTCGCTGAACTTCTGCTATCTGCATCCCTCAAATATCTTCCATGGCTTGTAAAGTTATGCTTTTGAAACTGATGAACTTTAGGCCTAATTCATCGACAAGGAACTTGCATTTCTAAGAGGTGCTGAGGGCAAAGATAAGGTCAACTATACATGTCTTCTCTGATGGGCTCTGGATTATAAATATTACAGTATTCCCCATTTTCTTCCTGTACAAGGGGAGAAACGTAATACCTGAATCTTGACACCTCTTGTGTTGTTTCTTATATTTATTATTTGTAACATAAAGGAGAAACTTGATGTTGTTGATTTATTTCATGCATTCTGATG</gDNA_template>
            <first_frame> K  S  I  S  T  D  G  E  I  Q  Q  *  K  *  K  S  I  F  T  N  G  E  I  Q  Q  *  T  *  K  S  I  S  T  N  G  E  I  P  H  *  K  *  K  S  I  S  T  N  V  E  I  K  Q  *  K  *  K  S  I  S  T  I  C  S  S  I  T  T  R  L  R  L  E  I  S  P  C  W  G  *  A  *  V  P  N  F  S  L  I  S  L  F  P  *  G  T  F  C  T  S  S  L  N  F  C  Y  L  H  P  S  N  I  F  H  G  L  *  S  Y  A  F  E  T  D  E  L  *  A  *  F  I  D  K  E  L  A  F  L  R  G  A  E  G  K  D  K  V  N  Y  T  C  L  L  *  W  A  L  D  Y  K  Y  Y  S  I  P  H  F  L  P  V  Q  G  E  K  R  N  T  *  I  L  T  P  L  V  L  F  L  I  F  I  I  C  N  I  K  E  K  L  D  V  V  D  L  F  H  A  F  *   </first_frame>
            <second_frame>  R  A  Y  P  P  T  E  R  F  N  S  E  N  R  R  A  Y  S  P  T  G  R  F  S  S  E  P  E  R  A  Y  P  P  T  V  R  F  H  T  E  S  E  R  A  Y  P  P  T  W  R  L  N  S  E  N  E  R  A  Y  P  P  Y  A  P  Q  L  P  P  D  Y  G  L  K  Y  H  H  V  G  D  E  P  R  Y  P  T  L  V  S  S  R  Y  S  L  R  E  P  S  A  P  R  R  *  T  S  A  I  C  I  P  Q  I  S  S  M  A  C  K  V  M  L  L  K  L  M  N  F  R  P  N  S  S  T  R  N  L  H  F  *  E  V  L  R  A  K  I  R  S  T  I  H  V  F  S  D  G  L  W  I  I  N  I  T  V  F  P  I  F  F  L  Y  K  G  R  N  V  I  P  E  S  *  H  L  L  C  C  F  L  Y  L  L  F  V  T  *  R  R  N  L  M  L  L  I  Y  F  M  H  S  D  </second_frame>
            <third_frame>   E  H  I  H  R  R  R  D  S  T  V  K  I  E  E  H  I  H  Q  R  G  D  S  A  V  N  L  K  E  H  I  H  Q  R  *  D  S  T  L  K  V  K  E  H  I  H  Q  R  G  D  *  T  V  K  M  K  E  H  I  H  H  M  L  L  N  Y  H  Q  T  T  A  *  N  I  T  M  L  G  M  S  L  G  T  Q  L  *  S  H  L  A  I  P  L  G  N  L  L  H  L  V  A  E  L  L  L  S  A  S  L  K  Y  L  P  W  L  V  K  L  C  F  *  N  *  *  T  L  G  L  I  H  R  Q  G  T  C  I  S  K  R  C  *  G  Q  R  *  G  Q  L  Y  M  S  S  L  M  G  S  G  L  *  I  L  Q  Y  S  P  F  S  S  C  T  R  G  E  T  *  Y  L  N  L  D  T  S  C  V  V  S  Y  I  Y  Y  L  *  H  K  G  E  T  *  C  C  *  F  I  S  C  I  L  M </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0170H21.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="115205" stop="115510"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>303</number_coding_nucleotides>
                  <number_encoded_amino_acids>101</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RAYPPTERFNSENRRAYSPTGRFSSEPERAYPPTVRFHTESERAYPPTWRLNSENERAYPPYAPQLPPDYGLKYHHVGDEPRYPTLVSSRYSLREPSAPRR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="116730" PGL_stop="118589"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="116730" e_stop="116787"/>
            <exon e_start="116953" e_stop="117069"/>
            <exon e_start="118225" e_stop="118286"/>
            <exon e_start="118403" e_stop="118589"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.406" acc_prob="0.912" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="116730" e_stop="116787" e_length="58"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="116788" i_stop="116952" i_length="165"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="116953" e_stop="117069" e_length="117"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.997">
            <gDNA_intron_boundary i_start="117070" i_stop="118224" i_length="1155"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="118225" e_stop="118286" e_length="62"/>
          </exon>
          <intron i_serial="3" don_prob="0.406" acc_prob="0.912">
            <gDNA_intron_boundary i_start="118287" i_stop="118402" i_length="116"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="118403" e_stop="118589" e_length="187"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116730" stop="116787"/>
              <exon start="116953" stop="117069"/>
              <exon start="118225" stop="118286"/>
              <exon start="118403" stop="118589"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331496" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGATAATCAAGAATGGCCGGCGAATCGACGCCGGCTACCGGGAAAACTCTCCCTTCAG : GATCCATGGAGGTGAGGGAGAGACGAAAATGGGGTGTTTCAGCCTCAGAGGCTGTGTCCCATTTTGGTACAAGTGGAATGTCTGTTGCTGCTGCAACTGCAATCACTCATCCTTTAG : ATGTTTTGAAAGTTAGATTGCAGATGCAACTTGTTGGTCAGAGAGGGCCTTTGGTCGGAATT : GGGAGGCTTTCTCTTCAAGTAGTTGAAAGCGAAGGACTGAAATCCTTGTATCTGGGATTGGCACCTTCATTGATGAGGTCAGTTCTTTATGGTGGTCTCCGTTTAGGATTATACGAACCGTCAAAATATCTCTGTGAATTGGCTTTTGAGTCCACCAATATCTTGGTGAAGATTGCATCTGGAGCAT</gDNA_template>
            <first_frame> G  *  S  R  M  A  G  E  S  T  P  A  T  G  K  T  L  P  S   : G  S  M  E  V  R  E  R  R  K  W  G  V  S  A  S  E  A  V  S  H  F  G  T  S  G  M  S  V  A  A  A  T  A  I  T  H  P  L   : D  V  L  K  V  R  L  Q  M  Q  L  V  G  Q  R  G  P  L  V  G  I  :  G  R  L  S  L  Q  V  V  E  S  E  G  L  K  S  L  Y  L  G  L  A  P  S  L  M  R  S  V  L  Y  G  G  L  R  L  G  L  Y  E  P  S  K  Y  L  C  E  L  A  F  E  S  T  N  I  L  V  K  I  A  S  G  A  </first_frame>
            <second_frame>  D  N  Q  E  W  P  A  N  R  R  R  L  P  G  K  L  S  L  Q  :  D  P  W  R  *  G  R  D  E  N  G  V  F  Q  P  Q  R  L  C  P  I  L  V  Q  V  E  C  L  L  L  L  Q  L  Q  S  L  I  L  *  :  M  F  *  K  L  D  C  R  C  N  L  L  V  R  E  G  L  W  S  E  L :   G  G  F  L  F  K  *  L  K  A  K  D  *  N  P  C  I  W  D  W  H  L  H  *  *  G  Q  F  F  M  V  V  S  V  *  D  Y  T  N  R  Q  N  I  S  V  N  W  L  L  S  P  P  I  S  W  *  R  L  H  L  E  H </second_frame>
            <third_frame>   I  I  K  N  G  R  R  I  D  A  G  Y  R  E  N  S  P  F  R :   I  H  G  G  E  G  E  T  K  M  G  C  F  S  L  R  G  C  V  P  F  W  Y  K  W  N  V  C  C  C  C  N  C  N  H  S  S  F  R :   C  F  E  S  *  I  A  D  A  T  C  W  S  E  R  A  F  G  R  N   : W  E  A  F  S  S  S  S  *  K  R  R  T  E  I  L  V  S  G  I  G  T  F  I  D  E  V  S  S  L  W  W  S  P  F  R  I  I  R  T  V  K  I  S  L  *  I  G  F  *  V  H  Q  Y  L  G  E  D  C  I  W  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0170H21.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="116736" stop="116787"/>
                    <exon start="116953" stop="117069"/>
                    <exon start="118225" stop="118286"/>
                    <exon start="118403" stop="118588"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>417</number_coding_nucleotides>
                  <number_encoded_amino_acids>139</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SRMAGESTPATGKTLPSGSMEVRERRKWGVSASEAVSHFGTSGMSVAAATAITHPLDVLKVRLQMQLVGQRGPLVGIGRLSLQVVESEGLKSLYLGLAPSLMRSVLYGGLRLGLYEPSKYLCELAFESTNILVKIASGA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="121946" PGL_stop="122106"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="121946" e_stop="122106"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="121946" e_stop="122106" e_length="161"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121946" stop="122106"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338918" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCAACTTTGCCATCTAAAAATCCCCTAATTTTCCGAAATCAGCGAAGACCCGGCGCAGAAGAAGAAGAAAATATACAGAAAAATTGAAGAGATCGACAGAGTTGTCGAAGACTTTTAGAGAGAGAAAGTGTGTTTGTGAGTGAGAGAGAGTGTGTGGGTTG</gDNA_template>
            <first_frame> P  T  L  P  S  K  N  P  L  I  F  R  N  Q  R  R  P  G  A  E  E  E  E  N  I  Q  K  N  *  R  D  R  Q  S  C  R  R  L  L  E  R  E  S  V  F  V  S  E  R  E  C  V  G   </first_frame>
            <second_frame>  Q  L  C  H  L  K  I  P  *  F  S  E  I  S  E  D  P  A  Q  K  K  K  K  I  Y  R  K  I  E  E  I  D  R  V  V  E  D  F  *  R  E  K  V  C  L  *  V  R  E  S  V  W  V  </second_frame>
            <third_frame>   N  F  A  I  *  K  S  P  N  F  P  K  S  A  K  T  R  R  R  R  R  R  K  Y  T  E  K  L  K  R  S  T  E  L  S  K  T  F  R  E  R  K  C  V  C  E  *  E  R  V  C  G  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C09HBa0170H21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="122276" PGL_stop="127711"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="122276" e_stop="122304"/>
            <exon e_start="122472" e_stop="122554"/>
            <exon e_start="124343" e_stop="124394"/>
            <exon e_start="124591" e_stop="124716"/>
            <exon e_start="124802" e_stop="124881"/>
            <exon e_start="127089" e_stop="127256"/>
            <exon e_start="127555" e_stop="127711"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.959" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.977" acc_prob="0.974" e_score="1.000"/>
          <exon-intron don_prob="0.862" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.761" e_score="1.000"/>
          <exon-intron don_prob="0.936" acc_prob="0.976" e_score="1.000"/>
          <exon-only e_score="0.962"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="122276" e_stop="122304" e_length="29"/>
          </exon>
          <intron i_serial="1" don_prob="0.959" acc_prob="0.981">
            <gDNA_intron_boundary i_start="122305" i_stop="122471" i_length="167"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="122472" e_stop="122554" e_length="83"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="122555" i_stop="124342" i_length="1788"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="124343" e_stop="124394" e_length="52"/>
          </exon>
          <intron i_serial="3" don_prob="0.977" acc_prob="0.974">
            <gDNA_intron_boundary i_start="124395" i_stop="124590" i_length="196"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="124591" e_stop="124716" e_length="126"/>
          </exon>
          <intron i_serial="4" don_prob="0.862" acc_prob="0.985">
            <gDNA_intron_boundary i_start="124717" i_stop="124801" i_length="85"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="124802" e_stop="124881" e_length="80"/>
          </exon>
          <intron i_serial="5" don_prob="0.992" acc_prob="0.761">
            <gDNA_intron_boundary i_start="124882" i_stop="127088" i_length="2207"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="127089" e_stop="127256" e_length="168"/>
          </exon>
          <intron i_serial="6" don_prob="0.936" acc_prob="0.976">
            <gDNA_intron_boundary i_start="127257" i_stop="127554" i_length="298"/>
          </intron>
          <exon e_serial="7" e_score="0.962">
            <gDNA_exon_boundary e_start="127555" e_stop="127711" e_length="157"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="122276" stop="122304"/>
              <exon start="122472" stop="122554"/>
              <exon start="124343" stop="124394"/>
              <exon start="124591" stop="124716"/>
              <exon start="124802" stop="124881"/>
              <exon start="127089" stop="127256"/>
              <exon start="127555" stop="127582"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698831" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="124828" stop="124881"/>
              <exon start="127089" stop="127256"/>
              <exon start="127555" stop="127571"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281503" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="124843" stop="124881"/>
              <exon start="127089" stop="127256"/>
              <exon start="127555" stop="127711"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277743" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="124843" stop="124881"/>
              <exon start="127089" stop="127209"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202734" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAAAGACAAAACTACGCGTGCTTCTCGAG : GCTGTTGTTTTGTGATCTGTCCATCTAGAGAAGAAGCGGATAAGGCAGTTAATGCATGCCACAACAAAAAGACGCTTTCCGGG : GCTTCTAGTCCGTTGCAAGTGAAGTATGCTGATGGCGAGTTGGAAAGACTAG : AGCACAAGCTTTTTGTTGGTATGCTTCCAAAGAATGTCTCTGATCCTGAAGTATCTGCCTTGTTCTCTCAATATGGAGTCATTAAAGATTTGCAGATTCTCAGAGGTTCTCAGCAAACCAGTAAAG : GATGTGCTTTTCTGAAGTATGAGAAAAAAGAACAAGCAGTTGCAGCAATAGATGCCCTCCATGGAAAGCATAAGATGGAG : GGTGCTACTGTCCCTTTGGTAGTCAAGTGGGCAGATACTGAAAAGGAAAGGCAGGCCCGGAGGGCTCAGAAATCTCTATCTCATGCTTCCGACTCTAGACAGCATCCCTCTTTGTTTGGAGCCCTACCTATGGGTTACATGCCACCATACAATGGCTATGGCTATCAG : ACTCCTGGGGCATATGGGCTCATGCAGTATCGTCTACCATCAATGCAAAATCAGTCTGCATTTCAGAATATAGTCCCACCAATAAACCAAGCAAGTGCTCTACGTGGAGGTGCACCTGATCTTTCACCTGGAATTAGTCCAAGAAATTATGCCATGT</gDNA_template>
            <first_frame> Q  R  Q  N  Y  A  C  F  S  R :   L  L  F  C  D  L  S  I  *  R  R  S  G  *  G  S  *  C  M  P  Q  Q  K  D  A  F  R   : G  F  *  S  V  A  S  E  V  C  *  W  R  V  G  K  T  R :   A  Q  A  F  C  W  Y  A  S  K  E  C  L  *  S  *  S  I  C  L  V  L  S  I  W  S  H  *  R  F  A  D  S  Q  R  F  S  A  N  Q  *  R :   M  C  F  S  E  V  *  E  K  R  T  S  S  C  S  N  R  C  P  P  W  K  A  *  D  G   : G  C  Y  C  P  F  G  S  Q  V  G  R  Y  *  K  G  K  A  G  P  E  G  S  E  I  S  I  S  C  F  R  L  *  T  A  S  L  F  V  W  S  P  T  Y  G  L  H  A  T  I  Q  W  L  W  L  S   : D  S  W  G  I  W  A  H  A  V  S  S  T  I  N  A  K  S  V  C  I  S  E  Y  S  P  T  N  K  P  S  K  C  S  T  W  R  C  T  *  S  F  T  W  N  *  S  K  K  L  C  H   </first_frame>
            <second_frame>  K  D  K  T  T  R  A  S  R   : G  C  C  F  V  I  C  P  S  R  E  E  A  D  K  A  V  N  A  C  H  N  K  K  T  L  S  G  :  A  S  S  P  L  Q  V  K  Y  A  D  G  E  L  E  R  L   : E  H  K  L  F  V  G  M  L  P  K  N  V  S  D  P  E  V  S  A  L  F  S  Q  Y  G  V  I  K  D  L  Q  I  L  R  G  S  Q  Q  T  S  K   : G  C  A  F  L  K  Y  E  K  K  E  Q  A  V  A  A  I  D  A  L  H  G  K  H  K  M  E  :  G  A  T  V  P  L  V  V  K  W  A  D  T  E  K  E  R  Q  A  R  R  A  Q  K  S  L  S  H  A  S  D  S  R  Q  H  P  S  L  F  G  A  L  P  M  G  Y  M  P  P  Y  N  G  Y  G  Y  Q  :  T  P  G  A  Y  G  L  M  Q  Y  R  L  P  S  M  Q  N  Q  S  A  F  Q  N  I  V  P  P  I  N  Q  A  S  A  L  R  G  G  A  P  D  L  S  P  G  I  S  P  R  N  Y  A  M  </second_frame>
            <third_frame>   K  T  K  L  R  V  L  L  E  :  A  V  V  L  *  S  V  H  L  E  K  K  R  I  R  Q  L  M  H  A  T  T  K  R  R  F  P  G :   L  L  V  R  C  K  *  S  M  L  M  A  S  W  K  D  *  :  S  T  S  F  L  L  V  C  F  Q  R  M  S  L  I  L  K  Y  L  P  C  S  L  N  M  E  S  L  K  I  C  R  F  S  E  V  L  S  K  P  V  K  :  D  V  L  F  *  S  M  R  K  K  N  K  Q  L  Q  Q  *  M  P  S  M  E  S  I  R  W  R :   V  L  L  S  L  W  *  S  S  G  Q  I  L  K  R  K  G  R  P  G  G  L  R  N  L  Y  L  M  L  P  T  L  D  S  I  P  L  C  L  E  P  Y  L  W  V  T  C  H  H  T  M  A  M  A  I  R :   L  L  G  H  M  G  S  C  S  I  V  Y  H  Q  C  K  I  S  L  H  F  R  I  *  S  H  Q  *  T  K  Q  V  L  Y  V  E  V  H  L  I  F  H  L  E  L  V  Q  E  I  M  P  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0170H21.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="122277" stop="122304"/>
                    <exon start="122472" stop="122554"/>
                    <exon start="124343" stop="124394"/>
                    <exon start="124591" stop="124716"/>
                    <exon start="124802" stop="124881"/>
                    <exon start="127089" stop="127256"/>
                    <exon start="127555" stop="127710"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>693</number_coding_nucleotides>
                  <number_encoded_amino_acids>231</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KDKTTRASRGCCFVICPSREEADKAVNACHNKKTLSGASSPLQVKYADGELERLEHKLFVGMLPKNVSDPEVSALFSQYGVIKDLQILRGSQQTSKGCAFLKYEKKEQAVAAIDALHGKHKMEGATVPLVVKWADTEKERQARRAQKSLSHASDSRQHPSLFGALPMGYMPPYNGYGYQTPGAYGLMQYRLPSMQNQSAFQNIVPPINQASALRGGAPDLSPGISPRNYAM</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 182 chains have been computed
$ 
$ memory statistics:
$ 156144 bytes spliced alignments in total
$ 76 spliced alignments have been stored
$ 2054 bytes was the average size of a spliced alignment
$ 24840 bytes predicted gene locations in total
$ 16 predicted gene locations have been stored
$ 1552 bytes was the average size of a predicted gene location
$ 2 megabytes was the average size of the backtrace matrix
$ 239 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-15 12:52:35
-->
