psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 569 1 0 0 0 0 3 4480 + SGN-E213470 570 0 570 C09SLe0004H20.2 73480 66291 71341 4 83,78,99,310, 0,83,161,260, 66291,66466,66627,71031, 55 0 0 0 0 0 0 0 + SGN-E216786 506 441 496 C09SLe0004H20.2 73480 8984 9039 1 55, 441, 8984, 574 5 0 0 1 1 2 1062 + SGN-E231479 582 0 580 C09SLe0004H20.2 73480 15873 17514 3 163,278,138, 0,163,442, 15873,17095,17376, 257 0 0 0 0 0 0 0 - SGN-E236163 257 0 257 C09SLe0004H20.2 73480 26651 26908 1 257, 0, 26651, 577 3 0 0 0 0 4 1299 - SGN-E236194 580 0 580 C09SLe0004H20.2 73480 15754 17633 5 37,151,280,107,5, 0,37,188,468,575, 15754,15885,17095,17377,17628, 48 0 0 0 1 39 2 229 - SGN-E238040 421 129 216 C09SLe0004H20.2 73480 58122 58399 3 28,7,13, 205,233,279, 58122,58157,58386, 670 0 0 0 0 0 4 1299 - SGN-E241888 670 0 670 C09SLe0004H20.2 73480 15664 17633 5 127,151,280,107,5, 0,127,278,558,665, 15664,15885,17095,17377,17628, 121 0 0 0 0 0 0 0 - SGN-E246537 550 429 550 C09SLe0004H20.2 73480 7056 7177 1 121, 0, 7056, 468 1 0 0 0 0 4 2365 + SGN-E257784 482 0 469 C09SLe0004H20.2 73480 46806 49640 5 131,155,88,60,35, 0,131,286,374,434, 46806,48430,48674,48848,49605, 518 1 0 0 0 0 3 911 - SGN-E285471 519 0 519 C09SLe0004H20.2 73480 38371 39801 4 146,285,72,16, 0,146,431,503, 38371,39021,39712,39785, 555 2 0 0 0 0 3 4480 + SGN-E286951 567 0 557 C09SLe0004H20.2 73480 66301 71338 4 73,78,99,307, 0,73,151,250, 66301,66466,66627,71031, 557 1 0 0 1 1 3 4480 + SGN-E287105 570 0 559 C09SLe0004H20.2 73480 66295 71333 5 57,22,78,99,302, 0,58,80,158,257, 66295,66352,66466,66627,71031, 505 1 0 0 0 0 3 4480 + SGN-E289440 506 0 506 C09SLe0004H20.2 73480 66289 71275 4 85,78,99,244, 0,85,163,262, 66289,66466,66627,71031, 538 1 0 0 0 0 3 4480 + SGN-E292337 539 0 539 C09SLe0004H20.2 73480 66295 71314 4 79,78,99,283, 0,79,157,256, 66295,66466,66627,71031, 464 0 0 0 0 0 0 0 - SGN-E293348 464 0 464 C09SLe0004H20.2 73480 52102 52566 1 464, 0, 52102, 499 0 0 0 0 0 3 4480 + SGN-E295407 513 0 499 C09SLe0004H20.2 73480 66333 71312 4 41,78,99,281, 0,41,119,218, 66333,66466,66627,71031, 545 1 0 0 0 0 3 4480 + SGN-E299492 555 0 546 C09SLe0004H20.2 73480 66312 71338 4 62,78,99,307, 0,62,140,239, 66312,66466,66627,71031, 34 1 0 0 0 0 1 7 + SGN-E306045 528 225 260 C09SLe0004H20.2 73480 58122 58164 2 28,7, 225,253, 58122,58157, 108 1 0 0 0 0 0 0 - SGN-E310861 534 425 534 C09SLe0004H20.2 73480 7068 7177 1 109, 0, 7068, 34 0 0 0 0 0 0 0 - SGN-E315196 612 0 34 C09SLe0004H20.2 73480 58122 58156 1 34, 578, 58122, 51 0 0 0 2 20 3 224 - SGN-E322983 736 168 239 C09SLe0004H20.2 73480 64916 65191 4 14,11,12,14, 497,511,531,554, 64916,65107,65145,65177, 33 1 0 0 0 0 0 0 + SGN-E326816 669 284 318 C09SLe0004H20.2 73480 58126 58160 1 34, 284, 58126, 550 0 0 0 0 0 6 6345 + SGN-E329576 550 0 550 C09SLe0004H20.2 73480 8996 15891 7 43,180,40,57,86,138,6, 0,43,223,263,320,406,544, 8996,10029,13309,14322,14807,15653,15885, 39 1 0 0 0 0 2 125 - SGN-E331882 628 233 273 C09SLe0004H20.2 73480 56125 56290 3 19,6,15, 355,374,380, 56125,56145,56275, 376 1 0 0 0 0 3 4480 + SGN-E338366 377 0 377 C09SLe0004H20.2 73480 66299 71156 4 75,78,99,125, 0,75,153,252, 66299,66466,66627,71031, 124 0 0 0 0 0 0 0 - SGN-E346462 522 379 503 C09SLe0004H20.2 73480 7053 7177 1 124, 19, 7053, 667 0 0 0 0 0 4 586 + SGN-E349213 678 0 667 C09SLe0004H20.2 73480 4090 5343 5 87,79,95,96,310, 0,87,166,261,357, 4090,4306,4629,4843,5033, 643 0 0 0 0 0 3 4480 + SGN-E349829 654 0 643 C09SLe0004H20.2 73480 66289 71412 4 85,78,99,381, 0,85,163,262, 66289,66466,66627,71031, 312 0 0 0 0 0 0 0 + SGN-E352241 323 0 312 C09SLe0004H20.2 73480 52289 52601 1 312, 0, 52289, 493 0 0 0 0 0 3 4753 + SGN-E353684 493 0 493 C09SLe0004H20.2 73480 66493 71739 4 51,99,333,10, 0,51,150,483, 66493,66627,71031,71729, 518 4 0 0 1 1 3 1913 + SGN-E353781 528 5 528 C09SLe0004H20.2 73480 14807 17242 5 86,138,151,120,27, 5,91,229,380,501, 14807,15653,15885,17095,17215, 493 0 0 0 0 0 3 4753 + SGN-E354283 493 0 493 C09SLe0004H20.2 73480 66493 71739 4 51,99,333,10, 0,51,150,483, 66493,66627,71031,71729, 546 2 0 0 0 0 2 910 - SGN-E354339 548 0 548 C09SLe0004H20.2 73480 38274 39732 3 243,285,20, 0,243,528, 38274,39021,39712, 537 0 0 0 0 0 3 4480 + SGN-E372687 585 0 537 C09SLe0004H20.2 73480 66295 71312 4 79,78,99,281, 0,79,157,256, 66295,66466,66627,71031, 49 4 0 0 0 0 0 0 - SGN-E376588 663 476 529 C09SLe0004H20.2 73480 51798 51851 1 53, 134, 51798, 49 4 0 0 0 0 0 0 - SGN-E379855 706 476 529 C09SLe0004H20.2 73480 51798 51851 1 53, 177, 51798, 182 1 0 0 1 2 2 619 - SGN-E391825 615 430 615 C09SLe0004H20.2 73480 6375 7177 3 33,27,123, 0,35,62, 6375,6409,7054, 668 0 0 0 0 0 4 1382 - SGN-E392786 668 0 668 C09SLe0004H20.2 73480 15667 17717 5 124,151,280,107,6, 0,124,275,555,662, 15667,15885,17095,17377,17711, 549 2 0 0 0 0 2 1061 + SGN-E395808 551 0 551 C09SLe0004H20.2 73480 15872 17484 3 164,280,107, 0,164,444, 15872,17095,17377, 462 0 0 0 0 0 2 145 - SGN-E395876 470 0 462 C09SLe0004H20.2 73480 17114 17721 3 261,191,10, 8,269,460, 17114,17377,17711, 446 9 0 0 0 0 2 145 - SGN-E396654 455 0 455 C09SLe0004H20.2 73480 17121 17721 3 254,191,10, 0,254,445, 17121,17377,17711, 645 2 0 0 0 0 3 1201 + SGN-E396655 647 0 647 C09SLe0004H20.2 73480 15872 17720 4 164,280,194,9, 0,164,444,638, 15872,17095,17377,17711, 35 0 0 0 1 1 1 17 - SGN-E397281 632 22 58 C09SLe0004H20.2 73480 58127 58179 2 26,9, 574,601, 58127,58170, 704 0 0 1 7 8 10 3712 + SGN-E541086 722 9 722 C09SLe0004H20.2 73480 46905 51322 17 32,18,7,16,11,4,24,21,53,88,60,33,78,44,41,83,92, 9,41,61,69,86,98,103,128,150,203,291,351,384,462,506,547,630, 46905,48430,48449,48456,48472,48483,48487,48511,48532,48674,48848,49605,49731,49892,50649,50930,51230, 42 0 0 0 0 0 2 700 - SGN-E551640 574 504 546 C09SLe0004H20.2 73480 9281 10023 3 17,6,19, 28,45,51, 9281,9486,10004, 43 0 0 0 0 0 2 700 - SGN-E552210 705 598 641 C09SLe0004H20.2 73480 9281 10024 3 17,6,20, 64,81,87, 9281,9486,10004, 36 0 0 0 0 0 1 704 - SGN-E553619 799 159 195 C09SLe0004H20.2 73480 9283 10023 2 18,18, 604,622, 9283,10005, 536 0 0 0 0 0 4 4871 + SGN-E578412 536 0 536 C09SLe0004H20.2 73480 66332 71739 5 42,78,99,307,10, 0,42,120,219,526, 66332,66466,66627,71031,71729, 45 1 0 0 0 0 0 0 - SGN-E689891 532 443 489 C09SLe0004H20.2 73480 16416 16462 1 46, 43, 16416, 393 2 0 0 2 3 4 4310 + SGN-E691205 410 1 399 C09SLe0004H20.2 73480 66633 71338 6 95,139,31,96,26,8, 1,98,238,269,365,391, 66633,71035,71174,71206,71303,71330, 390 4 0 0 3 4 4 4310 + SGN-E691206 411 2 400 C09SLe0004H20.2 73480 66634 71338 7 4,90,139,31,96,26,8, 2,7,99,239,270,366,392, 66634,66638,71035,71174,71206,71303,71330, 45 1 0 0 0 0 0 0 - SGN-E691648 386 320 366 C09SLe0004H20.2 73480 16416 16462 1 46, 20, 16416, 45 1 0 0 0 0 0 0 - SGN-E691751 479 418 464 C09SLe0004H20.2 73480 16416 16462 1 46, 15, 16416, 55 1 0 0 1 12 1 9 + SGN-E693524 774 528 596 C09SLe0004H20.2 73480 16397 16462 2 10,46, 528,550, 16397,16416, 31 0 0 0 0 0 0 0 + SGN-E693960 918 13 44 C09SLe0004H20.2 73480 16431 16462 1 31, 13, 16431, 385 3 0 0 3 8 4 4315 - SGN-E695045 414 17 413 C09SLe0004H20.2 73480 66633 71336 6 95,139,31,93,24,6, 1,98,238,269,367,391, 66633,71035,71174,71206,71305,71330, 386 2 0 0 3 8 4 4315 - SGN-E695046 413 16 412 C09SLe0004H20.2 73480 66633 71336 6 95,139,31,93,24,6, 1,98,238,269,367,391, 66633,71035,71174,71206,71305,71330, 35 0 0 0 0 0 0 0 + SGN-E696002 864 50 85 C09SLe0004H20.2 73480 16427 16462 1 35, 50, 16427, 35 1 0 0 0 0 0 0 + SGN-E696379 790 49 85 C09SLe0004H20.2 73480 16422 16458 1 36, 49, 16422, 452 5 0 2 0 0 3 1027 - SGN-E703155 922 463 922 C09SLe0004H20.2 73480 5691 7177 4 92,115,129,123, 0,92,207,336, 5691,5784,6307,7054, 372 0 0 0 1 1 2 1026 - SGN-E711032 836 463 836 C09SLe0004H20.2 73480 5770 7168 4 117,12,129,114, 0,118,130,259, 5770,5887,6307,7054, 521 3 0 0 0 0 4 4871 + SGN-E711510 527 3 527 C09SLe0004H20.2 73480 66344 71739 5 30,78,99,307,10, 3,33,111,210,517, 66344,66466,66627,71031,71729, 523 1 0 0 0 0 4 4871 + SGN-E712224 561 37 561 C09SLe0004H20.2 73480 66344 71739 5 30,78,99,307,10, 37,67,145,244,551, 66344,66466,66627,71031,71729, 532 0 0 0 0 0 4 4873 + SGN-E733344 536 4 536 C09SLe0004H20.2 73480 66335 71740 5 39,78,99,304,12, 4,43,121,220,524, 66335,66466,66627,71031,71728, 620 0 0 0 0 0 4 4481 + SGN-E734280 632 0 620 C09SLe0004H20.2 73480 66288 71389 5 66,19,78,99,358, 0,66,85,163,262, 66288,66355,66466,66627,71031,