psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 36 0 0 0 0 0 1 3 + SGN-U312998 797 580 616 C09HBa0007I05.1 111343 66822 66861 2 31,5, 580,611, 66822,66856, 31 0 0 0 0 0 0 0 - SGN-U312998 797 577 608 C09HBa0007I05.1 111343 66822 66853 1 31, 189, 66822, 35 0 0 0 0 0 1 11 + SGN-U313546 614 131 166 C09HBa0007I05.1 111343 93484 93530 2 27,8, 131,158, 93484,93522, 42 0 0 0 1 1 1 10 - SGN-U313546 614 129 172 C09HBa0007I05.1 111343 45562 45614 2 7,35, 442,450, 45562,45579, 41 0 0 0 1 1 2 15 + SGN-U313979 2003 1940 1982 C09HBa0007I05.1 111343 93474 93530 3 6,27,8, 1940,1947,1974, 93474,93484,93522, 51 1 0 0 1 66 3 171 + SGN-U314381 377 249 367 C09HBa0007I05.1 111343 66625 66848 4 12,3,12,25, 249,261,264,342, 66625,66679,66765,66823, 2491 0 0 0 0 0 7 3707 - SGN-U315338 2512 0 2491 C09HBa0007I05.1 111343 84034 90232 8 652,221,113,595,183,165,429,133, 21,673,894,1007,1602,1785,1950,2379, 84034,85207,85559,86254,86980,87286,87636,90099, 31 0 0 0 0 0 0 0 - SGN-U315944 853 759 790 C09HBa0007I05.1 111343 66822 66853 1 31, 63, 66822, 2558 0 0 0 0 0 13 6819 - SGN-U316387 2581 0 2558 C09HBa0007I05.1 111343 68397 77774 14 491,57,85,48,114,132,85,80,220,242,84,175,379,366, 23,514,571,656,704,818,950,1035,1115,1335,1577,1661,1836,2215, 68397,69696,69853,70711,70870,71071,72413,72580,73545,73890,74217,74896,76099,77408, 798 0 0 0 0 0 5 2989 - SGN-U316388 798 0 798 C09HBa0007I05.1 111343 68711 72498 6 177,242,48,114,132,85, 0,177,419,467,581,713, 68711,69696,70711,70870,71071,72413, 58 4 0 0 0 0 0 0 - SGN-U317031 1269 304 366 C09HBa0007I05.1 111343 55040 55102 1 62, 903, 55040, 58 2 0 0 1 40 1 40 - SGN-U317032 3404 2090 2190 C09HBa0007I05.1 111343 56782 56882 2 16,44, 1214,1270, 56782,56838, 33 0 0 0 0 0 0 0 - SGN-U319112 1349 1230 1263 C09HBa0007I05.1 111343 45578 45611 1 33, 86, 45578, 35 0 0 0 0 0 1 11 - SGN-U319112 1349 1228 1263 C09HBa0007I05.1 111343 93484 93530 2 27,8, 86,113, 93484,93522, 1251 3 0 0 2 9 5 3515 + SGN-U319404 1277 0 1263 C09HBa0007I05.1 111343 2917 7686 6 20,498,237,127,321,51, 0,23,521,758,885,1212, 2917,2941,6269,7063,7309,7635, 45 2 0 0 0 0 0 0 + SGN-U319404 1277 468 515 C09HBa0007I05.1 111343 3602 3649 1 47, 468, 3602, 33 1 0 0 0 0 0 0 - SGN-U319540 1535 119 153 C09HBa0007I05.1 111343 45575 45609 1 34, 1382, 45575, 261 18 0 0 1 20 2 7708 - SGN-U320506 916 549 848 C09HBa0007I05.1 111343 56784 64771 3 98,129,52, 68,166,315, 56784,64471,64719, 91 7 0 0 0 0 0 0 - SGN-U320506 916 750 848 C09HBa0007I05.1 111343 64297 64395 1 98, 68, 64297, 88 5 0 0 1 7 1 1 - SGN-U321730 834 230 330 C09HBa0007I05.1 111343 60432 60526 2 74,19, 504,585, 60432,60507, 88 5 0 0 1 7 1 1 - SGN-U321731 782 8 108 C09HBa0007I05.1 111343 60432 60526 2 74,19, 674,755, 60432,60507, 30 0 0 0 0 0 0 0 - SGN-U322694 1255 1202 1232 C09HBa0007I05.1 111343 45574 45604 1 30, 23, 45574, 31 1 0 0 0 0 0 0 + SGN-U323351 1986 13 45 C09HBa0007I05.1 111343 93485 93517 1 32, 13, 93485, 35 0 0 0 1 7 0 0 - SGN-U323387 715 466 508 C09HBa0007I05.1 111343 66822 66857 2 14,21, 207,228, 66822,66836, 45 0 0 0 1 52 1 45 + SGN-U324118 1393 1279 1376 C09HBa0007I05.1 111343 66765 66855 2 12,33, 1279,1343, 66765,66822, 45 0 0 0 1 48 1 22682 + SGN-U324118 1393 1160 1253 C09HBa0007I05.1 111343 88530 111257 2 21,24, 1160,1229, 88530,111233, 32 0 0 0 0 0 0 0 + SGN-U324412 1644 1587 1619 C09HBa0007I05.1 111343 45580 45612 1 32, 1587, 45580, 378 33 0 0 0 0 4 443 - SGN-U325540 811 11 422 C09HBa0007I05.1 111343 54394 55248 5 71,122,88,64,66, 389,460,582,670,734, 54394,54584,54851,55040,55182, 674 1 0 0 0 0 1 109 - SGN-U328091 683 0 675 C09HBa0007I05.1 111343 52585 53369 2 414,261, 8,422, 52585,53108, 519 1 0 0 1 1 3 3 - SGN-U329081 528 0 521 C09HBa0007I05.1 111343 36704 37227 5 412,15,30,24,39, 7,420,435,465,489, 36704,37116,37132,37163,37188, 34 0 0 0 0 0 0 0 + SGN-U330936 735 111 145 C09HBa0007I05.1 111343 45577 45611 1 34, 111, 45577, 36 0 0 0 0 0 1 11 + SGN-U330936 735 111 147 C09HBa0007I05.1 111343 93483 93530 2 28,8, 111,139, 93483,93522, 35 0 0 0 0 0 1 11 - SGN-U330936 735 115 150 C09HBa0007I05.1 111343 93484 93530 2 27,8, 585,612, 93484,93522, 50 0 0 0 0 0 2 44389 + SGN-U331169 506 259 309 C09HBa0007I05.1 111343 66820 111259 3 16,9,25, 259,275,284, 66820,76500,111234, 1005 0 0 0 0 0 1 1288 - SGN-U331558 1062 57 1062 C09HBa0007I05.1 111343 24045 26338 2 888,117, 0,888, 24045,26221, 49 1 0 0 1 103 2 87 + SGN-U332637 883 666 819 C09HBa0007I05.1 111343 111120 111257 3 6,20,24, 666,672,795, 111120,111129,111233, 35 0 0 0 0 0 1 88 + SGN-U333014 368 311 346 C09HBa0007I05.1 111343 111136 111259 2 11,24, 311,322, 111136,111235, 32 0 0 0 0 0 0 0 - SGN-U333166 664 502 534 C09HBa0007I05.1 111343 45580 45612 1 32, 130, 45580, 32 0 0 0 0 0 0 0 + SGN-U337093 539 91 123 C09HBa0007I05.1 111343 45581 45613 1 32, 91, 45581, 482 14 0 0 1 10 5 9247 - SGN-U337137 535 29 535 C09HBa0007I05.1 111343 55047 64790 6 57,62,71,96,139,71, 0,57,119,190,286,435, 55047,55182,55883,56786,56957,64719, 209 13 0 0 1 67 2 1876 - SGN-U337137 535 246 535 C09HBa0007I05.1 111343 62300 64398 3 57,66,99, 0,57,190, 62300,62433,64299, 124 3 0 0 0 0 0 0 - SGN-U337137 535 119 246 C09HBa0007I05.1 111343 64474 64601 1 127, 289, 64474, 38 0 0 0 0 0 2 27 - SGN-U338646 647 533 571 C09HBa0007I05.1 111343 66807 66872 3 8,23,7, 76,84,107, 66807,66827,66865, 47 0 0 0 1 35 2 321 - SGN-U339038 511 399 481 C09HBa0007I05.1 111343 107827 108195 3 17,15,15, 30,47,97, 107827,107940,108180, 458 9 0 0 1 10 6 132 + SGN-U339262 495 18 495 C09HBa0007I05.1 111343 52602 53201 8 36,21,95,19,32,145,26,93, 18,54,75,170,199,231,376,402, 52602,52639,52669,52775,52794,52827,52973,53108, 638 0 0 0 0 0 0 0 + SGN-U341011 647 7 645 C09HBa0007I05.1 111343 12405 13043 1 638, 7, 12405, 30 0 0 0 0 0 0 0 - SGN-U341394 513 482 512 C09HBa0007I05.1 111343 45582 45612 1 30, 1, 45582, 671 0 0 0 1 1 0 0 - SGN-U343071 672 0 672 C09HBa0007I05.1 111343 71596 72267 2 170,501, 0,171, 71596,71766, 34 0 0 1 0 0 0 0 - SGN-U344400 536 492 527 C09HBa0007I05.1 111343 45576 45611 1 35, 9, 45576, 35 0 0 0 0 0 1 11 - SGN-U344400 536 490 525 C09HBa0007I05.1 111343 93484 93530 2 27,8, 11,38, 93484,93522, 60 2 0 0 1 12 1 10 - SGN-U344784 896 720 794 C09HBa0007I05.1 111343 42018 42090 2 25,37, 102,139, 42018,42053, 329 0 0 0 1 1 9 1205 - SGN-U346702 330 0 330 C09HBa0007I05.1 111343 39098 40632 10 109,47,53,40,16,19,16,10,9,10, 0,109,156,209,249,265,284,300,311,320, 39098,39872,39996,40423,40545,40562,40582,40599,40612,40622, 33 0 0 0 0 0 0 0 - SGN-U346883 758 264 297 C09HBa0007I05.1 111343 45576 45609 1 33, 461, 45576,