psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 801 4 0 0 0 0 5 3446 + SGN-U312968 881 0 805 C09HBa0191P09.1 40116 523 4774 6 66,149,57,39,178,316, 0,66,215,272,311,489, 523,1130,1366,1660,1789,4458, 592 36 0 0 4 7 4 956 + SGN-U312969 769 94 729 C09HBa0191P09.1 40116 519 2103 8 70,149,57,40,187,59,10,56, 94,164,313,370,411,602,662,673, 519,1130,1366,1660,1791,1978,2037,2047, 629 0 0 0 0 0 4 955 + SGN-U312970 713 51 680 C09HBa0191P09.1 40116 519 2103 5 70,149,57,39,314, 51,121,270,327,366, 519,1130,1366,1660,1789, 49 0 0 0 1 29 3 979 - SGN-U315141 977 894 972 C09HBa0191P09.1 40116 38631 39659 4 5,23,5,16, 5,10,62,67, 38631,38639,39636,39643, 909 17 0 0 1 6 4 495 + SGN-U326021 950 0 932 C09HBa0191P09.1 40116 17185 18606 5 498,109,108,124,87, 0,498,607,721,845, 17185,17759,18242,18374,18519, 689 0 0 0 0 0 5 5007 + SGN-U326936 689 0 689 C09HBa0191P09.1 40116 31229 36925 6 283,41,50,145,51,119, 0,283,324,374,519,570, 31229,32576,33961,34177,35167,36806, 75 2 0 0 0 0 0 0 - SGN-U327458 1087 422 499 C09HBa0191P09.1 40116 2889 2966 1 77, 588, 2889, 37 0 0 0 0 0 1 3 - SGN-U328123 633 554 591 C09HBa0191P09.1 40116 38631 38671 2 5,32, 42,47, 38631,38639, 690 2 0 0 3 3 0 0 + SGN-U330565 713 1 696 C09HBa0191P09.1 40116 2992 3684 4 10,10,42,630, 1,12,23,66, 2992,3002,3012,3054, 639 7 0 0 0 0 1 988 + SGN-U331409 699 0 646 C09HBa0191P09.1 40116 37954 39588 2 348,298, 0,348, 37954,39290, 217 8 0 0 1 1 0 0 + SGN-U332549 699 0 226 C09HBa0191P09.1 40116 29020 29245 2 88,137, 0,89, 29020,29108, 33 2 0 0 0 0 0 0 + SGN-U333675 208 0 35 C09HBa0191P09.1 40116 38640 38675 1 35, 0, 38640, 39 0 0 0 0 0 2 987 - SGN-U333790 572 488 527 C09HBa0191P09.1 40116 38631 39657 3 5,20,14, 45,50,70, 38631,38639,39643, 548 37 0 0 4 8 5 957 + SGN-U334052 716 6 599 C09HBa0191P09.1 40116 561 2103 8 28,149,57,40,186,59,10,56, 6,34,183,240,281,472,532,543, 561,1130,1366,1660,1791,1978,2037,2047, 36 0 0 0 1 1 1 4 - SGN-U334251 657 254 291 C09HBa0191P09.1 40116 38631 38671 2 6,30, 366,373, 38631,38641, 813 2 0 1 2 3 2 379 + SGN-U338295 819 0 819 C09HBa0191P09.1 40116 17185 18380 4 680,87,14,35, 0,682,770,784, 17185,18242,18329,18345, 857 2 0 0 1 1 1 1 - SGN-U340253 862 2 862 C09HBa0191P09.1 40116 25159 26019 3 26,824,9, 0,27,851, 25159,25185,26010, 453 0 0 0 0 0 0 0 + SGN-U342381 489 36 489 C09HBa0191P09.1 40116 24695 25148 1 453, 36, 24695, 34 0 0 0 0 0 1 3 + SGN-U342450 505 35 69 C09HBa0191P09.1 40116 38631 38668 2 5,29, 35,40, 38631,38639, 154 5 0 0 1 1 0 0 + SGN-U344226 460 80 240 C09HBa0191P09.1 40116 5172 5331 2 26,133, 80,107, 5172,5198, 31 0 0 0 0 0 0 0 - SGN-U344527 658 412 443 C09HBa0191P09.1 40116 38637 38668 1 31, 215, 38637, 49 0 0 0 0 0 0 0 + SGN-U344822 417 368 417 C09HBa0191P09.1 40116 14963 15012 1 49, 368, 14963, 39 0 0 0 0 0 2 987 + SGN-U345148 410 6 45 C09HBa0191P09.1 40116 38631 39657 3 5,20,14, 6,11,31, 38631,38639,39643,