<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-18 02:30:24"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U333512" ref_strand="+" ref_description="SGN-U333512        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | enolase, identical to SWISS-PROT:P25696 enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)(2-phospho-D- glycerate hydro-lyase) (Arabidopsis thaliana) | chr2:15327835-15330945 REVERSE | Aliases: F1O11.16, F1O11_16(evalue: 3e-44, score=175) genbank/nr: gi|19281|emb|CAA41115.1| enolase [Lycopersicon esculentum] >gi|119354|sp|P26300|ENO_LYCES Enolase (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) (evalue: 2e-46, score=188)">
      <seq>tcgagtttttttttttttttttttaaccaaaaccatcaaaatattaattagaacatagtagaaacttgcatatcaaagttttacagtaaccaagcctaaaaaaaactctttttttttcttttcagaattcaaaatactaataaaacctcagaaaacaaaacttggttttgagtctgcttggtatttcaccaagggcatataatataatcctaaaatgaccaatctaagaggaatttatttttgggagaataacaactccacaatctccacacttggaactggtgaaatttaataagggtccacggggttggggaaacttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0100J12.1" temp_strand="-" temp_description="C09HBa0100J12.1  EU139070.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0100J12 upload_account_name:spain">
        <position start="25371" stop="483"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3082" g_stop="3068" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="15" r_length="15" r_score="0.733"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3067" i_stop="1088" i_length="1980">
            <donor d_prob="0.477" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1087" g_stop="783" g_length="305"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="320" r_length="305" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0100J12.1" gen_strand="-" ref_id="SGN-U333512" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>320</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0100J12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U333512" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3082" e_stop="3068"/>
          <exon e_start="1087" e_stop="783"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTGCATTTTTTTTGCAACTTCTTAGCACTTATAACTTTCTTCTTCTTATTACTATTATTCATCAACATCTCCTTCATCCTTCTGCAAATATCAAAAACCTCCATTGATGAATTAACCTAAAAACTTTTAGTAAAAAAATAATAGCGGAAAAAGACTTGTGAGTATTTTAGTAACTTTTGAGAAAAATGTAAGTTATATATAGTTTTTATTTTCGTAAAATTCGGATCCTAATAAAAGTAGGATTAATTAAAGTAGGATTTAAATAAGGAAACAAACATATAAATATATAGCAATAACAATTTTTTTAAATCCTAATTGAAGTAGATTTAAGTCGGCTAATCAACTTTCCAAATTTCTTCTCAATGGGTTTAGGGTATTTTTTCTTATAAAAAAAAGTAAATAATTATTATAAATATTTGTGTATATATAATTCAATTTATTATATTTAAAAATATATGAAAATAATTAGTATTAGTAGGTATGTTTCATCATAATAAGTACATAAATAATATTAACACATAATTTGATCATGATAAAAATTAAAAACTCTTTTTCCAAAATAGAAGCCTAAAACATATGCCTTATTTTTTTTATAAGCATAGAGTTGACCTCGACTATATTCCCATATTCTTACAATAACTTTTATGCTCTATGATTTTTTATTTTTCTGTTCTTTCTTCTATATACTCGTATTCTCTAAGAGTAGTATAAAATAAAATCGTGATCTATTTCAAGTCTGGATTTAAAAGTAATAATTTATTTAGTACATCAATTTATACCACATTCATAAACCAAAATATTATATATATTATTTTTGACTTAATTAAACATTGAGCTGGTTTGCCCGAGAGGTTAAGGGGGAAGACTTAAGATCTTCTGCACATAAGTGCGCATGGGTTCGAACCCCATAGCCAGCAATTTTTTTAAAATTTTTTTTTTTAATGTTAATTTTTTTTTAAAAATTTCCTCTTTATTCATATTTCATTCGATTTCGCTCCATGTAACGCCGATTAAATGGGAAAGCATTCTCTATCGAAACTCTTTTTACATTTTTAGAATTTGAACATGAGATTTTATCTATTCCATGATAACCGTCAATGATATCGAAAGCGATCGAGTGATATATTCTTTTCAGATAGATAGAAAGAGATTTGATGCTAGTTGTACGTTTGGTTTTTATTTTACTTTCTAATAAACTTTTATGTATATCATTTATAGTTGGTTCTACTATTCTTTGTGGTTGATAGCTCACAAAATTGTATAGAAGTTTTACATTATTTCCTCTACTTTAGTTAATTGTATTATCGGAAAAGGATCTAAAATATTCTTAAATTATTTGAATTGATACGAAATTATCCTTCATCCACCTATTGGCTCTCAGTATCTTTTTATCCATATTTGAATTCAATACTGACCACTTTTATAGGAGTTAACTATACCCAACTCAAATTAACCACACCCTCCCAAAATTACATTTACCCCCATCGATTAAAACAAATGCACCCTTCATTCCCAATATTTTACTTCCTCTTCCAACTTTACTTCCCCAACAAAAAATTACTACCTAAATATACCATAAGAAATTTACCAAAACATGCATGATTTTTTATGATAATACATGTGCGTACTTAGGTAGTGTTTTTAGAGATCGTAAGCGAATATATTGGAGAAGAAAGCTGCAAGATTAAGTGAAATGTTAGAAAATTGTTACTTGGGACGGGTGAAATTAATTTATTTGGATCGAAGCGTGTATTTAAATGATAATCTGTTATAAAAGTGACCAATATTGGACGCAAAGAGATATTTGAGAGCGGATAGGAGTATGACAAGGGAGTAAGATAATTTTGTACCATTTTCAATACTTTAAAGTGTTTTAAGCCCTTTTTCCATTGTAATATTAACTATAGTTATTTTTATTCAAGTCCTTTCTAATAAATAATAGTTTTCTCCAAAAAGAGCACATCTTATGTTATATAGCAAAGTAAAGATTGAGATTTGAAAAAACCAAAACCATCAAAATATTAATTAGAACATAGTAGAAACTTGCATATCAAAGTTTTACAGTAACCAAGCCTAAAAAAAACTCTTTTTTTTTCTTTTCAGAATTCAAAATACTAATAAAACCTCAGAAAACAAAACTTGTTTTTGAGTCTGCTTGTTATTTCACCAAGGTCATATAATATAATCCTAAAATGACCAATCTAAGAGGAATTTATTTTTGGCAGATCAACAACTCAACAATCTCAACACTTGGAACTGCTGAAATTTAGTAGGGCTCAACGGGCTTGCGGAAGCTTG</genome_strand>
        <mrna_strand>TCGAGTTTTTTTTTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTAACCAAAACCATCAAAATATTAATTAGAACATAGTAGAAACTTGCATATCAAAGTTTTACAGTAACCAAGCCTAAAAAAAACTCTTTTTTTTTCTTTTCAGAATTCAAAATACTAATAAAACCTCAGAAAACAAAACTTGGTTTTGAGTCTGCTTGGTATTTCACCAAGGGCATATAATATAATCCTAAAATGACCAATCTAAGAGGAATTTATTTTTGGGAGAATAACAACTCCACAATCTCCACACTTGGAACTGGTGAAATTTAATAAGGGTCCACGGGGTTGGGGAAACTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U316129" ref_strand="+" ref_description="SGN-U316129        Tomato 200607 #1 [29 ESTs aligned] arabidopsis/peptide: | Symbol: None | histone deacetylase, putative (HD2A), contains Pfam domain, PF00096: Zinc finger, C2H2 type; identical to cDNA putative histone deacetylase (HD2A) GI:11066134 | chr3:16308970-16310733 FORWARD | Aliases: T32N15.8(evalue: 1e-41, score=167) genbank/nr: gi|33667906|gb|AAQ24532.1| histone deacetylase [Solanum chacoense](evalue: 9e-112, score=406)">
      <seq>gatagtacaccctagctgtctctttcttcctccatttctcctctaaaaccctaatttctctctaaaaccctaaaagcagctatggagttttggggtgctgaggtgaaaagtggagagccattaactgtacagcctggagatgggatggttttgcatctttcacaggcatctctaggtgagttgaagaaggataaatcagaaagtgcctgcttgtcagtgaatattgatggcaagaaacttgttcttgggacactcaactcagagaaggtgcctcaacagcaatttgacctggtttttgataaagactttgaattatctcacaacttgaaaagtggcagtgtctacttttttggatacaaggcaactaacccgtttgatgaggaagaggatgacgaagatgattatgatgattctgatgaggatatccccctcactcttgccaacagtggtaaacctgaccctaaagaggctgggaagtctaacgctggaaaggattctgcttcaggaaagcagaaggtgaggattgtggagcctactaaagatgatgaagatgagagctctgatgatgatggttctgacttgggagaggatgaagacgactctgatgagagtgaggaggagacaccaaagaaggctgagcctgcaaaaaagaggaaggcagattcagctacaaaaacacctgtcactgataaaaaggcaaaattgacaacacctcaaaaaactgatggcaaaaaaggtggtgtccatgtagcaacaccgcacccttctaagcaggctagtaagactccaaaatcagctggatctcatcactgcaagccgtgcaacaggagttttggttctgaaggtgctctcgaatctcactcgaaagctaaacacagtgctggaaagtaaatagacatggagacatttagtctttgtttggttgttacctatgatcagaagagagcttttttagtcgtttttttccccgtttcgatttggttcatctgatgtaaaggaaagatgagttacatctattatgatctatctctaggtcaatcatctgttttgatgtttaagacttgttatgttttcaatgagagttttggattgaatcagagaatgttattgcctgttggtatcttgttatttgggaaaaaaaaaactaatgttaacattacaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0100J12.1" temp_strand="-" temp_description="C09HBa0100J12.1  EU139070.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0100J12 upload_account_name:spain">
        <position start="8914" stop="3710"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8615" g_stop="8522" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="94" r_length="94" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8521" i_stop="7360" i_length="1162">
            <donor d_prob="0.853" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7359" g_stop="7289" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="165" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7288" i_stop="7205" i_length="84">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="7204" g_stop="6990" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="380" r_length="215" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="6989" i_stop="6882" i_length="108">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="6881" g_stop="6853" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="381" r_stop="409" r_length="29" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="6852" i_stop="6771" i_length="82">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="6770" g_stop="6732" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="410" r_stop="448" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="6731" i_stop="6626" i_length="106">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="6625" g_stop="6486" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="449" r_stop="588" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="6485" i_stop="5056" i_length="1430">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="5055" g_stop="5011" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="589" r_stop="633" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="5010" i_stop="4919" i_length="92">
            <donor d_prob="0.913" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="4918" g_stop="4828" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="634" r_stop="724" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="4827" i_stop="4535" i_length="293">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="4534" g_stop="4432" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="725" r_stop="827" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="4431" i_stop="4345" i_length="87">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="4344" g_stop="4011" g_length="334"/>
          <reference_exon_boundary r_type="cDNA" r_start="828" r_stop="1161" r_length="334" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1162" polyA_stop="1181"/>
      <MATCH_line gen_id="C09HBa0100J12.1" gen_strand="-" ref_id="SGN-U316129" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1161</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0100J12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U316129" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8615" e_stop="8522"/>
          <exon e_start="7359" e_stop="7289"/>
          <exon e_start="7204" e_stop="6990"/>
          <exon e_start="6881" e_stop="6853"/>
          <exon e_start="6770" e_stop="6732"/>
          <exon e_start="6625" e_stop="6486"/>
          <exon e_start="5055" e_stop="5011"/>
          <exon e_start="4918" e_stop="4828"/>
          <exon e_start="4534" e_stop="4432"/>
          <exon e_start="4344" e_stop="4011"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATAGTACACCCTAGCAGTCTCTTTCTTCCTCCATTTCTCCTCTAAAACCCTAATTTCTCTCTAAAACCCTAAAAGCAGCTATGGAGTTTTGGGGTAAATCTCTTTACATACACTAATTCAATTTGATATGTTTGTATTTGATTGTTTCAATTTCAATTGCTGTTTCATGTATTTGTGTTCGTTTTGCTGTTTATGTTTTATGTTTTTTTTTTTACATTTTGATTTGTATGCATGCGTTTGTTTTTGCTCAAACATCAGTGAAATCTTATTATTGTGTGTGATTTTGGTACTAGAAATGTTGAGGTTGGTGCAGATATATGCAATTTGTATTTTCTAATTTTGATTGGCTTGCTTGATTAAAAGAGTTTTCCTGCGTTGGACAGCTACTGTGTCCTTCAATTTCTATTGCTCTACCATGTGTTTATGTTTGTTTTGATGTTGATTTTGTGTGTTTTTTTTTTTGCGTTTTGGTTTGTATGCGTGTCTTTGTTTTTGCTCACATATCAGTAAAATCTTATTACTTTATCATGAAATAATAATGTTGTGTCTGATTTGTGTACTAGAAATGTTGAGGCTAGCATTTTGAGTATTCTATATTTGATTGTTTTGATACCAATTGCTCTTTAATGTATATATGTATGTATGTTTTTCTGTTAATGTTTTATGTGATTTTTTTAATGTGTTTTGCCCAAGCATCAATCAAATTTATTACATTATCATAAAAATGTTTTGTGTGAGATCTTATTAGCAGAAATGGTTGAGGTTTTAGATTATTTTAGCTGGCTACAGTGTATTTTTCCCTAGAGTGGAAATATTTTATTGTATTATCTCAAAAGTTATTAGATTTTAATTATAAGCCTCAAGTTAGTATCTTTCATACTTGAACATAGATTGTTTTAGCAGGTTATGTTTGTTTTCGGGGAAGAAATGATGAGGTATAGCCTAAGGTTAGGGGCCTTGGTTGGGGGTTTTGAGTCAAGAAGGGCAAAGTGGGAAAAAGTTGTTTGTCTCTTTGTAGTTTTTTTTGACTTTTGAGAAGGCAGGGGTGGACGTTGTGGTGAGGTTTACCATAAAAAGGATGAAGTTTCTTTTCACAACATATCTGTTTGGGTTTATGCGTCCTTCATTCAAAGTTCAAATTTTCTCTTATTTGTGTTCTGTTTCTGGTGCACTTTTATTGAACATGCTTAATATGTTACTTGTATTGCTATTCCTGAACTCTCATTTTCTGAATTGAATATTTATTTGTGCATAGGTGCTGAGGTGAAAAGTGGAGAGCCATTAACTGTACAGCCTGGAGATGGGATGGTTTTGCATCTTTCACAGGTTTTATAATTTGCTACAACTTGATAAGCTTAGTTATTCGTAGTTGTCATTAGCTAATTCTCATTACTATGTTGTTATCTGCAGGCATCTCTAGGTGAGTTGAAGAAGGATAAATCAGAAAGTGCCTGCTTGTCAGTGAATATTGATGGCAAGAAACTTGTTCTTGGGACACTCAACTCAGAGAAGGTGCCTCAACAGCAATTTGACCTGGTTTTTGATAAAGACTTTGAATTATCTCACAACTTGAAAAGTGGCAGTGTCTACTTTTTTGGATACAAGGCAACTAACCCGTTTGATGAATATCCTTTTTTATTTGTCTGTTAACTTTTATTTCTTATAGGCATTTATTTTTCGTTCGATGTAAAATTTTGTGTATTTGTTTCATTGACCAAACTTCTGTGGTTCACGGAAGAGGATGACGAAGATGATTATGATGGTAAATGCACATTTTCTTTTGTTTGGACATCCATACTGTTCTGTGATTAGTTATTGATCGTCTGGTGTTCTTGTGTTTTCAGATTCTGATGAGGATATCCCCCTCACTCTTGCCAACAGTGGTATGGAAAATGCTTTTTTTTTTTACCAAGATATTATGTCAATTTAATAGATGGTTATACATCTTAATTGGCTAATGTTATTGTCTACTTTGTTAACTGACTTCAGGTAAACCTGACCCTAAAGAGGCTGGGAAGTCTAACGCTGGAAAGGATTCTGCTTCAGGAAAGCAGAAGGTGAGGATTGTGGAGCCTACTAAAGATGATGAAGATGAGAGCTCTGATGATGATGGTTCTGACTTGGGAGAGGTACAATTTTTTTTATATCTTCATGGTGTTTAAATTATTGTCATGGTCTTTTGTAGTATTAGTTAGGGAAACCAATACAAGGACAAAAAATGGGTGCCACTTGTTTAAGCTTGTTTGATTATTTAACTGAAATGTTAAAATGCCCTACTAAATTGTGGTGTCCGGACAACATTTTTTAAAAATCAAATGTACATTATATTTATCTTCAACATGCCATTGCAAGGACTTCGAGAGAGTTGTACTATGTAATCTCTTCTCTTAAACAAAAAAGTAGTGGAAGGAAAGCTTATCACTCACTAATATGTAAGGAGATGCGGTAAAAACGTGCTTTGGCAAGAACACCTACTAGACAAAGTAATGTGTATGAGGTCCATCCTATACAAGAGGTGGGGTACCTCCCAAAAATAAATCTATGACTATGTAAGGAGATGCGGTAAAAACATGCTTTGGCAAGAACACCTACTAGACAAAGTAATGTGTATGAGGTCCATCCTATACAAGAGGTGGGGTACCTCCAAAAATAAATCTATGACTATCCACTTGTGGTAGGAGGTCATTCTTCATGGAGGCTGAAAGATATTCAGGTTGTTCTTTTTGAATTGCGCATGGTTGGTGGACTCCATCTATCAACTTTCACGAGGCCTTTAATAACTCCCTTGGTTTTAATTGTTTGTCTTACTTTCCTTTCTGGTTCTTTTAAAAGGTCTTTTTCTTTTTTCGACGACCTTTTAATATCAACTTTCCACCTGACATTTTTAAGACCTTAAGATCGAAAGTCATTTGGGTACATTATATATATCTTTAGTTTTAGAGCACTAGATTGATAAGTCTCCTTTACTTTCCTAAACTTTGTGCCAAGTCATAATTAGACAAACTAATTGAAACCGAGGGAAGTAAAACATTGAGATTGATATCATAAGCATTTTTTTGGGGAAGAAAATGGCGGCTACTTGGAATGGCTAAGAGATGTTGGCTGCTTGGTTTTCTTCACCAAAAACAGAGCTTCAATAATTTTACTTCATTCTTAGCCTTCTTCAATTCTTATATTTCATTCATACTTCTCTGAGGTATCATATTGTTTCAATTGACAGTAGAGCAGTTTAGTCATTTTCAACTTGGACCTATTGACATCTTTTAGAAATACACATCTGATTCCAGCTTAATGCTAGTGCCTCTGCTAGATTGGGCTGGAGGCTGTGTTGTGGTATTTGGGGCTGTTTAAAAGTGTTTTTGTGGTTTTGAATTATATTGAATGACTGAACAGTTTTCATCTCTTTTAGCTCAGAAGCATACTCTACTTAATGATGCATTACAAAACTGATATGCTATGCAGTTGCTTTTATCTAATTTGTGGCTATGCTTTTCTCTGTGTAATTTATTGAGTTATACTTCTGATGTATTTACTGTATAAATTATATTTGTATATTCAGGATGAAGACGACTCTGATGAGAGTGAGGAGGAGACACCAAAGAAGGTAGTGATATTTCTGGGGTGGATAATTTATTGTTTTGCTGAGTATTTTGTTGTATGATTTATTGTTATTATGTGGTTTCATCTCTATTTTAGGCTGAGCCTGCAAAAAAGAGGAAGGCAGATTCAGCTACAAAAACACCTGTCACTGATAAAAAGGCAAAATTGACAACACCTCAAAAAACTGGTTTGTCTTGTCACTCTAATTTTTTATTTTTACTTCTTCTGGTCCATATTATTCCAAGAAACTAAGAAGGTTTTGACTAATAGACCCTTGTGGTCGGCCCTTCCCCTTCCCCTGCGCATAGTGTGGCAGTTTAGTGCACCGGGCTGTCCTTTTATAGTTATTGTACCAGGAAAACTAAAATTGCTGAGTTTTTTTTTTCTGAAAGATGTAACTGATAAAATTAATTTGCTGGTACTGGTGGTCAAATGGCTCAATTTATTCAGTATCTTTTTCTACTTTTGTGGTTGATTTAGATGGCAAAAAAGGTGGTGTCCATGTAGCAACACCGCACCCTTCTAAGCAGGCTAGTAAGACTCCAAAATCAGCTGGATCTCATCACTGCAAGCCGTGCAACAGGTACATATATTAATATCTCAACAAATTCAATTTGTTCAAGTAGACGCATTTGGATGTTTGGTGTATTCATGTATTGGTTCCTTGCAGGAGTTTTGGTTCTGAAGGTGCTCTCGAATCTCACTCGAAAGCTAAACACAGTGCTGGAAAGTAAATAGACATGGAGACATTTAGTCTTTGTTTGGTTGTTACCTATGATCAGAAGAGAGCTTTTTTAGTCGTTTTTTTCCCCGTTTCGATTTGGTTCATCTGATGTAAAGGAAAGATGAGTTACATCTATTATGATCTATCTCTAGGTCAATCATCTGTTTTGATGTTTAAGACTTGTTATGTTTTCAATGAGAGTTTTGGATTGAATCAGAGAATGTTATTGCCTGTTGGTATCTTGTTATTTGGGAAAAAAAAAACTAATGTTAACATTACA</genome_strand>
        <mrna_strand>GATAGTACACCCTAGCTGTCTCTTTCTTCCTCCATTTCTCCTCTAAAACCCTAATTTCTCTCTAAAACCCTAAAAGCAGCTATGGAGTTTTGGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTGAGGTGAAAAGTGGAGAGCCATTAACTGTACAGCCTGGAGATGGGATGGTTTTGCATCTTTCACAG....................................................................................GCATCTCTAGGTGAGTTGAAGAAGGATAAATCAGAAAGTGCCTGCTTGTCAGTGAATATTGATGGCAAGAAACTTGTTCTTGGGACACTCAACTCAGAGAAGGTGCCTCAACAGCAATTTGACCTGGTTTTTGATAAAGACTTTGAATTATCTCACAACTTGAAAAGTGGCAGTGTCTACTTTTTTGGATACAAGGCAACTAACCCGTTTGATGA............................................................................................................GGAAGAGGATGACGAAGATGATTATGATG..................................................................................ATTCTGATGAGGATATCCCCCTCACTCTTGCCAACAGTG..........................................................................................................GTAAACCTGACCCTAAAGAGGCTGGGAAGTCTAACGCTGGAAAGGATTCTGCTTCAGGAAAGCAGAAGGTGAGGATTGTGGAGCCTACTAAAGATGATGAAGATGAGAGCTCTGATGATGATGGTTCTGACTTGGGAGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAAGACGACTCTGATGAGAGTGAGGAGGAGACACCAAAGAAG............................................................................................GCTGAGCCTGCAAAAAAGAGGAAGGCAGATTCAGCTACAAAAACACCTGTCACTGATAAAAAGGCAAAATTGACAACACCTCAAAAAACTG.....................................................................................................................................................................................................................................................................................................ATGGCAAAAAAGGTGGTGTCCATGTAGCAACACCGCACCCTTCTAAGCAGGCTAGTAAGACTCCAAAATCAGCTGGATCTCATCACTGCAAGCCGTGCAACAG.......................................................................................GAGTTTTGGTTCTGAAGGTGCTCTCGAATCTCACTCGAAAGCTAAACACAGTGCTGGAAAGTAAATAGACATGGAGACATTTAGTCTTTGTTTGGTTGTTACCTATGATCAGAAGAGAGCTTTTTTAGTCGTTTTTTTCCCCGTTTCGATTTGGTTCATCTGATGTAAAGGAAAGATGAGTTACATCTATTATGATCTATCTCTAGGTCAATCATCTGTTTTGATGTTTAAGACTTGTTATGTTTTCAATGAGAGTTTTGGATTGAATCAGAGAATGTTATTGCCTGTTGGTATCTTGTTATTTGGGAAAAAAAAAACTAATGTTAACATTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335502" ref_strand="+" ref_description="SGN-U335502        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | histone deacetylase, putative (HD2A), contains Pfam domain, PF00096: Zinc finger, C2H2 type; identical to cDNA putative histone deacetylase (HD2A) GI:11066134 | chr3:16308970-16310733 FORWARD | Aliases: T32N15.8(evalue: 4e-27, score=118) genbank/nr: gi|33667906|gb|AAQ24532.1| histone deacetylase [Solanum chacoense](evalue: 3e-76, score=288)">
      <seq>agctatggagttttggggtgctgaggtgaaaagtggagagccattaactgtacagcctggagatgggatggttttgcatctttcacaggcatctctaggtgagttgaagaaggataaatcagaaagtgcctgcttgtcagtgaatattgatggcaagaaacttgttcttgggacactcaactcagagaaggtgcctcaacagcaatttgacctggtttttgataaagactttgaattatctcacaacttgaaaagtggcagtgtctacttttttggatacaaggcaactaacccgtttgatgaatatccttttttatttgtctgttaacttttatttcttataggcatttatttttcgttcgatgtaaaattttgtgtatttgtttcattgactaaacttctgtggttcacggaagaggatgacgaagatgattatgatgattctgatgaggatatccccctcactcttgccaacagtggtaaacctgaccctaaagaggctgggaagtctaacgctggaaaggattctgcttcaggaaagcagaaggtgangattgtggagcctactaaagatgatgaagatgagagctctgatgatgatggttctgacttgggagaggatgaacacgactctgatgagagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0100J12.1" temp_strand="-" temp_description="C09HBa0100J12.1  EU139070.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0100J12 upload_account_name:spain">
        <position start="7660" stop="4732"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7359" g_stop="7289" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="88" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7288" i_stop="7205" i_length="84">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7204" g_stop="6853" g_length="352"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="440" r_length="352" r_score="0.997"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6852" i_stop="6771" i_length="82">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6770" g_stop="6732" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="441" r_stop="479" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="6731" i_stop="6626" i_length="106">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="6625" g_stop="6486" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="480" r_stop="619" r_length="140" r_score="0.993"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="6485" i_stop="5056" i_length="1430">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="5055" g_stop="5032" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="620" r_stop="643" r_length="24" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0100J12.1" gen_strand="-" ref_id="SGN-U335502" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>626</cumulative_length_of_scored_exons>
        <coverage percentage="0.974" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0100J12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335502" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7359" e_stop="7289"/>
          <exon e_start="7204" e_stop="6853"/>
          <exon e_start="6770" e_stop="6732"/>
          <exon e_start="6625" e_stop="6486"/>
          <exon e_start="5055" e_stop="5032"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGCTGAGGTGAAAAGTGGAGAGCCATTAACTGTACAGCCTGGAGATGGGATGGTTTTGCATCTTTCACAGGTTTTATAATTTGCTACAACTTGATAAGCTTAGTTATTCGTAGTTGTCATTAGCTAATTCTCATTACTATGTTGTTATCTGCAGGCATCTCTAGGTGAGTTGAAGAAGGATAAATCAGAAAGTGCCTGCTTGTCAGTGAATATTGATGGCAAGAAACTTGTTCTTGGGACACTCAACTCAGAGAAGGTGCCTCAACAGCAATTTGACCTGGTTTTTGATAAAGACTTTGAATTATCTCACAACTTGAAAAGTGGCAGTGTCTACTTTTTTGGATACAAGGCAACTAACCCGTTTGATGAATATCCTTTTTTATTTGTCTGTTAACTTTTATTTCTTATAGGCATTTATTTTTCGTTCGATGTAAAATTTTGTGTATTTGTTTCATTGACCAAACTTCTGTGGTTCACGGAAGAGGATGACGAAGATGATTATGATGGTAAATGCACATTTTCTTTTGTTTGGACATCCATACTGTTCTGTGATTAGTTATTGATCGTCTGGTGTTCTTGTGTTTTCAGATTCTGATGAGGATATCCCCCTCACTCTTGCCAACAGTGGTATGGAAAATGCTTTTTTTTTTTACCAAGATATTATGTCAATTTAATAGATGGTTATACATCTTAATTGGCTAATGTTATTGTCTACTTTGTTAACTGACTTCAGGTAAACCTGACCCTAAAGAGGCTGGGAAGTCTAACGCTGGAAAGGATTCTGCTTCAGGAAAGCAGAAGGTGAGGATTGTGGAGCCTACTAAAGATGATGAAGATGAGAGCTCTGATGATGATGGTTCTGACTTGGGAGAGGTACAATTTTTTTTATATCTTCATGGTGTTTAAATTATTGTCATGGTCTTTTGTAGTATTAGTTAGGGAAACCAATACAAGGACAAAAAATGGGTGCCACTTGTTTAAGCTTGTTTGATTATTTAACTGAAATGTTAAAATGCCCTACTAAATTGTGGTGTCCGGACAACATTTTTTAAAAATCAAATGTACATTATATTTATCTTCAACATGCCATTGCAAGGACTTCGAGAGAGTTGTACTATGTAATCTCTTCTCTTAAACAAAAAAGTAGTGGAAGGAAAGCTTATCACTCACTAATATGTAAGGAGATGCGGTAAAAACGTGCTTTGGCAAGAACACCTACTAGACAAAGTAATGTGTATGAGGTCCATCCTATACAAGAGGTGGGGTACCTCCCAAAAATAAATCTATGACTATGTAAGGAGATGCGGTAAAAACATGCTTTGGCAAGAACACCTACTAGACAAAGTAATGTGTATGAGGTCCATCCTATACAAGAGGTGGGGTACCTCCAAAAATAAATCTATGACTATCCACTTGTGGTAGGAGGTCATTCTTCATGGAGGCTGAAAGATATTCAGGTTGTTCTTTTTGAATTGCGCATGGTTGGTGGACTCCATCTATCAACTTTCACGAGGCCTTTAATAACTCCCTTGGTTTTAATTGTTTGTCTTACTTTCCTTTCTGGTTCTTTTAAAAGGTCTTTTTCTTTTTTCGACGACCTTTTAATATCAACTTTCCACCTGACATTTTTAAGACCTTAAGATCGAAAGTCATTTGGGTACATTATATATATCTTTAGTTTTAGAGCACTAGATTGATAAGTCTCCTTTACTTTCCTAAACTTTGTGCCAAGTCATAATTAGACAAACTAATTGAAACCGAGGGAAGTAAAACATTGAGATTGATATCATAAGCATTTTTTTGGGGAAGAAAATGGCGGCTACTTGGAATGGCTAAGAGATGTTGGCTGCTTGGTTTTCTTCACCAAAAACAGAGCTTCAATAATTTTACTTCATTCTTAGCCTTCTTCAATTCTTATATTTCATTCATACTTCTCTGAGGTATCATATTGTTTCAATTGACAGTAGAGCAGTTTAGTCATTTTCAACTTGGACCTATTGACATCTTTTAGAAATACACATCTGATTCCAGCTTAATGCTAGTGCCTCTGCTAGATTGGGCTGGAGGCTGTGTTGTGGTATTTGGGGCTGTTTAAAAGTGTTTTTGTGGTTTTGAATTATATTGAATGACTGAACAGTTTTCATCTCTTTTAGCTCAGAAGCATACTCTACTTAATGATGCATTACAAAACTGATATGCTATGCAGTTGCTTTTATCTAATTTGTGGCTATGCTTTTCTCTGTGTAATTTATTGAGTTATACTTCTGATGTATTTACTGTATAAATTATATTTGTATATTCAGGATGAAGACGACTCTGATGAGAGT</genome_strand>
        <mrna_strand>GTGCTGAGGTGAAAAGTGGAGAGCCATTAACTGTACAGCCTGGAGATGGGATGGTTTTGCATCTTTCACAG....................................................................................GCATCTCTAGGTGAGTTGAAGAAGGATAAATCAGAAAGTGCCTGCTTGTCAGTGAATATTGATGGCAAGAAACTTGTTCTTGGGACACTCAACTCAGAGAAGGTGCCTCAACAGCAATTTGACCTGGTTTTTGATAAAGACTTTGAATTATCTCACAACTTGAAAAGTGGCAGTGTCTACTTTTTTGGATACAAGGCAACTAACCCGTTTGATGAATATCCTTTTTTATTTGTCTGTTAACTTTTATTTCTTATAGGCATTTATTTTTCGTTCGATGTAAAATTTTGTGTATTTGTTTCATTGACTAAACTTCTGTGGTTCACGGAAGAGGATGACGAAGATGATTATGATG..................................................................................ATTCTGATGAGGATATCCCCCTCACTCTTGCCAACAGTG..........................................................................................................GTAAACCTGACCCTAAAGAGGCTGGGAAGTCTAACGCTGGAAAGGATTCTGCTTCAGGAAAGCAGAAGGTGANGATTGTGGAGCCTACTAAAGATGATGAAGATGAGAGCTCTGATGATGATGGTTCTGACTTGGGAGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAACACGACTCTGATGAGAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U320790" ref_strand="+" ref_description="SGN-U320790        Tomato 200607 #1 [10 ESTs aligned] arabidopsis/peptide: | Symbol: None | C-14 sterol reductase / delta(14)-sterol reductase / FACKEL (FK), identical to gi:9082182 | chr3:19641176-19644274 REVERSE | Aliases: F8J2.111(evalue: 1e-151, score=533) genbank/nr: sterol(evalue: 9e-150, score=533)">
      <seq>tcaataatctcttcatttctctcactccatcatggacttcggtgtctatgttgatcggattttttctctatttagctaccgttggatctattctacccggaaaacttgttcctggggcgactttatctgatggaactcgactccattatcgttgcaatggtttattatcacttctgttgttggttttgcttcttggagttgggtcgcagatgaatcttgtttcacctactgctatagcagatagaggacttgagcttttgtccacaacacttatctttagtgttcttgtgacattgatgctttatttggttggcctgaactcacgtgcaaagagttcatcactgaaacctcatgtctcaggaaatctaatccatgactggtggtttgggatacaactgaatcctgaattcatgggcattgatctcaaatttttctttgttagagctggtatgatgggatggttacttatcaatctttcagttcttgcaaaatgtgttatagaggctaaattgagccaatcaatgattctctaccagctattttgtgggctctacatccttgactacttcttctatgaagagttcatgacctccacatgggatataatagcagagaggttgggctacatgctggtttttggtgatctagtctttataccgttcaccttcagtattcagggttggtggcttttgagtaacaaagtggagctaacaacagcagcaataattgccaattgcctcgtctttcttattgggtactcggtgttcagaggagccaataagcagaagcatgtatttaaaaaggatcccaaggcacccatatggggtagtcctccaaaagttattgggggaaagttgcttgcttctggctattggggcattgcacggcactgtaattacctcggggatttgttgctggcatcgtcttttagtttaccttgtggtataagctctgtggttccatacttttaccccatatatcttctcattctactcatatggagggagagaagggacgaagctagatgtgcagagaagtacaaagatgtgtgggctgaataccgtaaacttgttccttacaggatcttaccttacgtttactagctcaatcgtttgtccacgttgcttgtgcattagagtcagaattagcctcactgtaccgcactacccaagcatgagaagggacgaactcatgaatgaatattacatcaaattcgagcttttgccctatctatgcagctttctcatctcctctacgaaagtaatcttttaatctatttcagttaggatcaacactgtatccaggttgtaactgattgcttagcttttgaaagtttttccagaaccaacttgtacactagatgtactttatcatggcaggatttaaatgtgctgcttgtattgaatgccaactatggaattatttttcatggtttgtaatcttggagcagcttactaatgtgtgctgaaattttcgaatgattttcccgactttctagttttttgtatgccccttgactaatttcaggagatatttgctacgttcccccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0100J12.1" temp_strand="+" temp_description="C09HBa0100J12.1  EU139070.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0100J12 upload_account_name:spain">
        <position start="11641" stop="25371"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11941" g_stop="11981" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="41" r_length="41" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11982" i_stop="12079" i_length="98">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12080" g_stop="12197" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="159" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12198" i_stop="13078" i_length="881">
            <donor d_prob="0.507" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="13079" g_stop="13149" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="160" r_stop="230" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="13150" i_stop="13976" i_length="827">
            <donor d_prob="0.303" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13977" g_stop="14033" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="287" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="14034" i_stop="14179" i_length="146">
            <donor d_prob="0.805" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="14180" g_stop="14271" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="379" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="14272" i_stop="15041" i_length="770">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="15042" g_stop="15089" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="380" r_stop="427" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="15090" i_stop="15594" i_length="505">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.760" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="15595" g_stop="15715" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="428" r_stop="548" r_length="121" r_score="0.992"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="15716" i_stop="15804" i_length="89">
            <donor d_prob="0.942" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="15805" g_stop="15851" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="549" r_stop="595" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="15852" i_stop="16911" i_length="1060">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="16912" g_stop="16993" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="596" r_stop="677" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="16994" i_stop="18715" i_length="1722">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="18716" g_stop="18792" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="678" r_stop="754" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="18793" i_stop="18935" i_length="143">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.811" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="18936" g_stop="19055" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="755" r_stop="874" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="19056" i_stop="19332" i_length="277">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="19333" g_stop="19407" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="875" r_stop="949" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="19408" i_stop="19494" i_length="87">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.001" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="19495" g_stop="20096" g_length="602"/>
          <reference_exon_boundary r_type="cDNA" r_start="950" r_stop="1551" r_length="602" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1552" polyA_stop="1579"/>
      <MATCH_line gen_id="C09HBa0100J12.1" gen_strand="+" ref_id="SGN-U320790" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1551</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0100J12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U320790" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11941" e_stop="11981"/>
          <exon e_start="12080" e_stop="12197"/>
          <exon e_start="13079" e_stop="13149"/>
          <exon e_start="13977" e_stop="14033"/>
          <exon e_start="14180" e_stop="14271"/>
          <exon e_start="15042" e_stop="15089"/>
          <exon e_start="15595" e_stop="15715"/>
          <exon e_start="15805" e_stop="15851"/>
          <exon e_start="16912" e_stop="16993"/>
          <exon e_start="18716" e_stop="18792"/>
          <exon e_start="18936" e_stop="19055"/>
          <exon e_start="19333" e_stop="19407"/>
          <exon e_start="19495" e_stop="20096"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATAATCTCTTCATTTCTCTCACTCCATCATGGACTTCGGTCAGTATTTTTTCTTCTCTATTTGACTGTACATGTATCTATACAATCTGTGTGATTTTTTTTTTTTGCTGATTTTGTTCTTGTTTTGGTGAATATAGGTGTCTATGTTGATCGGATTTTTTCTCTATTTAGCTACCGTTGGATCTATTCTACCCGGAAAACTTGTTCCTGGGGCGACTTTATCTGATGGAACTCGACTCCATTATCGTTGCAATGGTAATGTGAATTGGTGTGTATTTTGATGAGTGGAGTCAGGATTTGAAGTTTATGGGTTTTGAGCTTGTTATCGAAAGCATTTAGTTAATGGGGGTTCGAATAATTTAAGCAAAAACTATTGAGTTCGTCTGGACTCTTGGTTAATGTTGTAGTTTTGTCTAGGGGATTTGAAGTTTATGGATTGTGAACTTTTTGTGGAACCCGTTCAGCTAAGCTATTGAGTTTGTTTGGACTCCTAGGGAATATTGTAGTTTTTCCTGGTGGGATTTGAGGTATATGGATTCTGAACTTGTTATCGAACCTGCTTAGTTAGTGGGTTGTTACTTGAATATTTATGCTTATCTAATGGATTTCCTAATACAATTATAAGGTTTAAGCAAAAGTTATTGGGTTTGTTTTAACTCCTATTTAATAGTGTAGTTTTGCTTGGACCCTTCGGGGTGGCTCAGTGGTTTGAGCTTGGGACTTCCATGTTGGACGTCTCAAGTTCGAAATCCTTTGCCAGCGAAAGCAAGGGGTTTGCCTTCTGGATCGAGAAAGCCTGGTGCGGGTTACGTCTCCTATGTGTTTTGCGAGCTATTGCATAGGAGCGGGGGTTTTACCTGTGCGCACCCTTTAAGGGTAGGTTTCCCTTGTCATAAAAAAAATGTAGTTTTGCTTGGTAGGACTTTGAAGTTGATGGATTCTGAACTTCTTGATGAATATATAGCTCGTTTTTGGTAATGTCTTTGCGATTAATATATAAATGCTTATTTAATAGAGTCTGTGCAAAAACTATTGGGTTGGTTCAAACCCGTACTTAATACTGTAGCTCTGCCCTTGTATATTTTCATGTTTCTCCATGCGGGTTGAGCTTAGATTATTTGTTGTTGCTATTTCAGGTTTATTATCACTTCTGTTGTTGGTTTTGCTTCTTGGAGTTGGGTCGCAGATGAATCTTGTTTCACCTACTGTGAGTGTGGAATATTTCTTTTGTAGCAAAGGATGTACTTTGGGTTCATTTGCATTCCCTGTTTATTAAGTTTGTTTGCACAAGTATTGCTTGTAAAACCTTCTTATGCGGATGAGCGAGGAACAATTTCTTGCTACACTTCGTGTAGAAGTGATGAGAGTGAGGATTTGTACTCATTGTTCCCAAGAGTCTCGTCTCCGGTGGAACAAATATTCTGTTGTTACTTTCTTTTCCTTGCATGGATGGTGAGATTGAGAAGCTGCATAATTTCACGTGAATTTATTCTTCCTTTTCATATCATTAAATTTAGGAACCAGGTTGTCATTTCAGTGAAAAAGAAATAATTGTGATATTATATGGCTTTCTCATTTCATACCAAAACCTTCAACAGAATTGGTGGTATGATGTCCAACTGCTGTAGTACCTTTCTGTTGTTTTTCCTCCTGCTTTTTTGATGACAATGTACTGTTAGCTTTTGTTCTTTTGTTATCTTTCTATTGTTGTCAATCTGATTTATCTTCATCGTCCCTGGAGAATTACTTGGTTAAGTACAAAACAAATTGTCAATCTGTTCATCTTCAATATCCCTATAGAATAACTTGGTGAAGTACAAAAACTGAAATAGAAGGACAAATTCTGCTGTTTACATGAGTGTACAAACTGGTTACTTAAAAGAACTTCACTTGGATCCAAAATTGCTCACAATGCTGCATCTTCAAATGATGCTGAAAACATGTGAAGGTCTAGAGTGTTGTATGTTTGGACAGGTTTTCTGTTTTTGGTATACTCATAAAGAGATGAAATCACCTATTCCTAATGCATTGCAGGCTATAGCAGATAGAGGACTTGAGCTTTTGTCCACAACACTTATCTTTAGTGTTCTTGTAAGTGAAGAATGTCATACCATAAGAAAGTAATTTATTCTTGATTATGCTTTTATTGACACAAACTTTCTTGTTCTGCAAAAGTTTCTAGCAAGTTAGAAGTTTCATTCTGGTATCTTAATTGTGAATGGCTGAATGATATTTAGGTGACATTGATGCTTTATTTGGTTGGCCTGAACTCACGTGCAAAGAGTTCATCACTGAAACCTCATGTCTCAGGAAATCTAATCCATGACTGGTAAGTCAATTGACTCTATGCTGTCGTTTATATTCTGAAAAGTTCTTAACACTAATAAAATGGTAATGTCATTCTTTATTGAACTGTCTTCCATCCATCCTTTGATCTATCTGTGTATTTATAAGACAGTTTGTGAATTGTTGTGAAGTTACCATTCAACATAAGATTTTTATTACTATTAAATAGTAAGAGCAGGAGTGAATAATTTTAATTTTCTCAATTAGTACCGGCATTTTGGCCTTTACCCAAGATATACTTAGATAACCATAGAATCGAGAGTTCTAATATATCTGTAATAATATATGACTATTAACAGTCATTAATTTTCTCACTTGACTCTGAGTGCACCTTAACAACCGGTAGTTCATTTTTCGGAAAAAGAAAAAGGAGAAGAATAATTTAGCTGTGGAAATTCATTGTTTTTCAGCTTTCATTAAAAAAGAGTAGGTTGATCTAGGTTTGACACATGACAACGAAAGTTTGTCGTTGAAGAGAACACCTCAGTATTATGAATCCTCAGCTCACTGCTGGAAAGCTTCTGCAATAGAAATCAGGGTAACATGATTTTGGCTATTATTCGACATATATAGGTAGTGATGGTCAAACACAGTACGAATATGGTTAAATTAAGCCGACTGTAGACTGATAACATCTTGTGTTTTCACCACATTGGAGCAAGATATTTATTTTGTTCTCTACATTAAGATTCTGTTGATTTTATTGTAATGAATACTCTCCTAATCTTTCTTCTATCCTATTTCCTTGACTAGGTGGTTTGGGATACAACTGAATCCTGAATTCATGGGCATTGATCTCAAGTATGTACTCATATCTCAGACCTTGTCTTTCACCATTGTTACAAGTGAACATTGAGAATTCAAAGTTTTCATCAGGCTATAATTTGATTATTTAGTTTATTTTGTTCGATATGTCCGGTAGTAACTTTGCTTAATCCTTTTCATGTTAATGACCAATCCATAAGCACTCAGCAGTTCCCACCAATAGTGAATTGTATATTTTGTAACCTAATTTAGTTTAGCTCTAAAAATGCTTTCTTCTGCTACCTGAAGGAAGAAAATATAGAGAATCCTTAATTTGTTTGGAGTGAACTATTGATGTTTGGCATGAAAAACTTACATGTTTTTGATGAACCAGAACTCATTTTCTGTCAAACTCCAAGCATAGTTGAATTCCTAGTCGAAGAGATTTTGAGAGGCCAGAATAGTTATTTTTGTTGTAATGAACTAATGACTCTCAGCTTCAATCAAGGCTATTTGGTTATTTCTTTTGACTTCTCTGCTTATGATGAATTTTCTGCTGTAGATTTTTCTTTGTTAGAGCTGGTATGATGGGATGGTTACTTATCAATCTTTCAGTTCTTGCAAAATGTGTTGTAGAGGCTAAATTGAGCCAATCAATGATTCTCTACCAGCTATTTTGTGGGGTAAGTCGCTGGCTGTACACTTCCAAGTATACCTTCTTGAGTATTTGCTAGTGATTTTTAAAACTTCTTTTATATGTGTTTAATTGCAGCTCTACATCCTTGACTACTTCTTCTATGAAGAGTTCATGACCTCCACGTAAGTTGGCGGCTTCTTCTCCGTTTAACTTTTTTAAGATTGAAAAGTTGTTGTGAAGCAAGAACTGGTGTTTCTCTTCTATCCCTTCTTTAATTTATGTCAGCTGTCCAGAATTTTATCTCTCTTTCACTAGCAGTTTCTTCATCTTTATTTGTTGTGTTGTTATTATGCTTTGATCTAAAATTCAAAATAAATCATCCATATGACAAGAATACCACATTGTACGCAACAAAATTAGAAGAGGGTAGGAAAAGGTTTAGGTGTTTAGCCATGAGAAGCATTAGCTTGGGAAGGATAATATGGTTTCTGGTCATTTTCGTGCTTTAATAAGGTAATGCTGGAAGCTGTATAATTAAAGGATTATGAGGTTTGCCGACTGGACTTGTTTGGGACTGAGGTGTTGTTGTTTATGAGGTAGCTGGGTTTGGTCCCTGGTGTCATGGTCAGAGAATCAACAACTGGAAGGAAATGGAGGGAGTTAGGGCAGCATAGGTTGTTTTGCATGGTCTAGGGGTGGTTGATTAGTAGCCTGGTCACAAGGGTTAGAATTAAAACAAGAAACTTCTTCCGAGTTCTATACATCCAATAACATGTCAGTTGAAACGAAGCAACTCTGAAGAACCTCTAGTGATGCTAACATTTGAACCCTACGGAACACAACTACTCCCAGAAACCTTGGAAGGGTCTGGCTGGGGCACCACTATTCTCATGTTAGGATTGTTTTGGGGGTGGGTGGGTGTTGAATTATGATATGATTGTTTTTTAGCTATAGTGAGTGGTTTTAATTTGTACGTAGCATGTACCAATTCAATATTATTGGGAGCATGAATTTTTATTGAAAATTTGAATTTATAAGGTTTGACCTTTCTAAGCCCTAAAATGTCTCATTATTGGCTGAATGATATGTTTGTTTTGTTAATTGTTAACCAGTGATTATATATTGATGGTGGTCACCTCATCTATTCCTCTTACCTTTCCCTTTCTTTGTAGTCTTAATATTATCTTCCTCCATTAAGTTTCTCAGCTACGGTTGTGTAAAGTCTTGTTTCTCCATTCTCAGATGGGATATAATAGCAGAGAGGTTGGGCTACATGCTGGTTTTTGGTGATCTAGTCTTTATACCGTTCACCTTCAGTATTCAGGCATGTATTCACAACCAATTCTTATTGCCACATACAAATCTATCCTTGTTTATATATGAATTATGGCACCTTTGATATCAGTATAATACAAATGTATATGACACCATTGGTATTAGTATAACACAAATGTATAGCTTGTAAATGAATTCTCTTCAAAAGCATAGTTTTGAACTATCACTTCTTGTGTCCTTCATCTCCTACTATATGTAATGATGCCTAGTTTCGTGGATACCAACACATTTTTTTTTTGAAATGGTAAAGGTTAGGCCATGCAACATATCCTTTTCCTGGAATTTATACCTCGCCTCATGCTACGATATTTTAATGGATATACTACTTGTTTGAATACCCAGAAAACTTTTTGTTTGTGTTTAGTTTTAAAGAATTTGAATCAAGGGCCTGTTAAAGAAGAGAAATGGAAAAGGAGAAACACATGTGTTTGTTTATCTTTTATTTTCTGAGGAAACCATGTATGGAAACTGTTGTCCCCTTCCTGAAAATGTTCTGAACAAGTTTTGTTTTTCGTAAAACACAGACGAATATTTCCATGTGTCCCCAATAATCAAAACGTGAACAACTTATGTTGTTAAAAGTACCCATTGCGCTGTGAAATCATACAGAATGAGAGAAGTCCTGATAACTTTGTTTTAGATAATATCCAATAGGGACCCTTTGGGGTGGCTTGGATGGTTTGGCTTGAGACTTCCATTATGGAGGTCTCAAGTTCGAAACCCCTTGTCTGCGACGACAGGATATTATCCTTCTAGGTTCAGCTTGTCGCACGGGGTGTGTATGTTGCTGTTGACCTCTTTTGTGTGGTTTACGGACCATTCCATAGGAGTGGGGTTTATCCTGTGCGCATTCGAAGGGTAGCGGCCGTAGGGTCCATTGTCATTAAAAAAACAATATCCAAGAGGGTATCCTGATTAAAGAGTTCTACTCTACTTATTATAGGGTAAATAATTGTTCTCGTTTATTAATAAGACAAGTAACTATTCTCCTTCATTAAACACAGAATAATTAGAAATAACCGGTAAAATTTTTATACATAACATTCTCCCACTCGAGTTCAATGACCCTAAACATATTTGCAACCTAGAAATCTACCATAATGGCCCTAAACATTCTTGCCTCATTAATGTTCTTGATTTTCAATTGTAGCAAGAATGTTTTTGTATTTTCTGTTGACCAGGCAATTGATAGTTCTGTGGCCTGATTGTGATTATCATGGTGCCAATTTCATGGTTGGGTTCATTGTGGAAAGGAGTCTAAACAATTTGTGTTCGGGTACAATGGTGTCCTGATGTGTGTCAGATAGTATTTGGAAAAGTTTTATAGTATGTCCAAGGACATGTGAAGAAGGCTTATGACTTTACCTTATCAAGAGAAGAGTTAAATATTATCTAGGAGCGGGAGTTCTCATTTCACTGCAGCCACTACCTAATATATATTTGGAATTAATGGCATACAAGAGTAACAAACAGAGATAGATGAAGCTGATTCTGGTTTCCAACTTTGAGTTCTATTACATCTGTGACTTGTGAGAATATAACACTGGAGAAAAGGGCGTATGCGAATGCATGGATTGTAATGACTCACGCTTCTACTCATATATATAGAGAGACTTTGTAATGAGGATATTTGCACTTGTTCAATGCAGGACAGTATACAAAGCTAGACTAACCTGTTTACTATCTAATAATATTTCTCTTCCTTTTTCAGGGTTGGTGGCTTTTGAGTAACAAAGTGGAGCTAACAACAGCAGCAATAATTGCCAATTGCCTCGTCTTTCTTATTGGGTAAGCATGCAAGGCCATCTCAATACTATTTTTTCCTCCGTCATCTGTATTGTGCACTTTTGTTATGTTTTTCAGACAATTTTTTGTTTATTTGTTGCTTTCACTAACATTTCTTGACATGGACCCCTGTTTCGGATTGAAAGGTACTCGGTGTTCAGAGGAGCCAATAAGCAGAAGCATGTATTTAAAAAGGATCCCAAGGCACCCATATGGGGTAGTCCTCCAAAAGTTATTGGGGGAAAGTTGCTTGCTTCTGGCTATTGGTAAGCTCTTGATCTTGCTTTTCTACTCTGTGTTATCGGTATCTTAATAATCCAGAACACGAAATGACTCCAGATTGAGAAAGACTATGTAATTTTTAATTTAGATACATGCGAGCTAGCTGTTGGATAAATACTTGAACTATATGATTAGTGTCCGTGAACATTTCATTCTGAACCACATTTCTTCTGAAGCTCATCAAATGTGGCATAGTGGCACATAAATTCTCTTCAGTTCTTCAAATTTTCGAAATTCTAAATCATTATATATTTTCTGAAGGGGCATTGCACGGCACTGTAATTACCTCGGGGATTTGTTGCTGGCATCGTCTTTTAGTTTACCTTGTGGTATAAGGTAATAATTTTGAACTCTTGCTACTTCAGTTTCAATGACAATTTGCATAGTAGTGAAAAAAATTACATTACTCGTGTATGCCTGCAGCTCTGTGGTTCCATACTTTTACCCCATATATCTTCTCATTCTACTCATATGGAGGGAGAGAAGGGACGAAGCTAGATGTGCAGAGAAGTACAAAGATGTGTGGGCTGAATACCGTAAACTTGTTCCTTACAGGATCTTACCTTACGTTTACTAGCTCAATCGTTTGTCCACGTTGCTTGTGCATTAGAGTCAGAATTAGCCTCACTGTACCGCACTACCCAAGCATGAGAAGGGACGAACTCATGAATGAATATTACATCAAATTCGAGCTTTTGCCCTATCTATGCAGCTTTCTCATCTCCTCTACGAAAGTAATCTTTTAATCTATTTCAGTTAGGATCAACACTGTATCCAGGTTGTAACTGATTGCTTAGCTTTTGAAAGTTTTTCCAGAACCAACTTGTACACTAGATGTACTTTATCATGGCAGGATTTAAATGTGCTGCTTGTATTGAATGCCAACTATGGAATTATTTTTCATGGTTTGTAATCTTGGAGCAGCTTACTAATGTGTGCTGAAATTTTCGAATGATTTTCCCGACTTTCTAGTTTTTTGTATGCACCTTGACTAATTTCAGGAGATATTTGCTACGTTCCACCAG</genome_strand>
        <mrna_strand>TCAATAATCTCTTCATTTCTCTCACTCCATCATGGACTTCG..................................................................................................GTGTCTATGTTGATCGGATTTTTTCTCTATTTAGCTACCGTTGGATCTATTCTACCCGGAAAACTTGTTCCTGGGGCGACTTTATCTGATGGAACTCGACTCCATTATCGTTGCAATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTATTATCACTTCTGTTGTTGGTTTTGCTTCTTGGAGTTGGGTCGCAGATGAATCTTGTTTCACCTACT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTATAGCAGATAGAGGACTTGAGCTTTTGTCCACAACACTTATCTTTAGTGTTCTT..................................................................................................................................................GTGACATTGATGCTTTATTTGGTTGGCCTGAACTCACGTGCAAAGAGTTCATCACTGAAACCTCATGTCTCAGGAAATCTAATCCATGACTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTTGGGATACAACTGAATCCTGAATTCATGGGCATTGATCTCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTCTTTGTTAGAGCTGGTATGATGGGATGGTTACTTATCAATCTTTCAGTTCTTGCAAAATGTGTTATAGAGGCTAAATTGAGCCAATCAATGATTCTCTACCAGCTATTTTGTGGG.........................................................................................CTCTACATCCTTGACTACTTCTTCTATGAAGAGTTCATGACCTCCAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGATATAATAGCAGAGAGGTTGGGCTACATGCTGGTTTTTGGTGATCTAGTCTTTATACCGTTCACCTTCAGTATTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTGGTGGCTTTTGAGTAACAAAGTGGAGCTAACAACAGCAGCAATAATTGCCAATTGCCTCGTCTTTCTTATTGG...............................................................................................................................................GTACTCGGTGTTCAGAGGAGCCAATAAGCAGAAGCATGTATTTAAAAAGGATCCCAAGGCACCCATATGGGGTAGTCCTCCAAAAGTTATTGGGGGAAAGTTGCTTGCTTCTGGCTATTG.....................................................................................................................................................................................................................................................................................GGGCATTGCACGGCACTGTAATTACCTCGGGGATTTGTTGCTGGCATCGTCTTTTAGTTTACCTTGTGGTATAAG.......................................................................................CTCTGTGGTTCCATACTTTTACCCCATATATCTTCTCATTCTACTCATATGGAGGGAGAGAAGGGACGAAGCTAGATGTGCAGAGAAGTACAAAGATGTGTGGGCTGAATACCGTAAACTTGTTCCTTACAGGATCTTACCTTACGTTTACTAGCTCAATCGTTTGTCCACGTTGCTTGTGCATTAGAGTCAGAATTAGCCTCACTGTACCGCACTACCCAAGCATGAGAAGGGACGAACTCATGAATGAATATTACATCAAATTCGAGCTTTTGCCCTATCTATGCAGCTTTCTCATCTCCTCTACGAAAGTAATCTTTTAATCTATTTCAGTTAGGATCAACACTGTATCCAGGTTGTAACTGATTGCTTAGCTTTTGAAAGTTTTTCCAGAACCAACTTGTACACTAGATGTACTTTATCATGGCAGGATTTAAATGTGCTGCTTGTATTGAATGCCAACTATGGAATTATTTTTCATGGTTTGTAATCTTGGAGCAGCTTACTAATGTGTGCTGAAATTTTCGAATGATTTTCCCGACTTTCTAGTTTTTTGTATGCCCCTTGACTAATTTCAGGAGATATTTGCTACGTTCCCCCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U319729" ref_strand="+" ref_description="SGN-U319729        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | DEMETER protein (DME), identical to DEMETER protein (Arabidopsis thaliana) GI:21743571; contains Pfam profile PF00730: HhH-GPD superfamily base excision DNA repair protein | chr5:1309194-1318387 FORWARD | Aliases: T32M21.160, T32M21_160, AT5G04570, AT5G04580(evalue: 2e-120, score=429) genbank/nr: DNA(evalue: 1e-118, score=429)">
      <seq>aaagagaaaagacagcaaacacaatggattcactagactgggacgcagtgaggtgtgcagatgtcaatgagatatcccataccattagagaacgggggatgaacaatatgctagcagagagaatcaaggatttccttaatcggatttttagagaacatggaagtattgatcttgaatggctgagagacgttccaccagacaaagcaaaagagtatctactaagcatcaggggcttgggcctgaagagcgtagagtgtgtgcgacttttaacacttcacaaccttgcttttccggtcgacacaaatgttgggcgtatagctgttagactgggatgggtgcccctgcagccactgccagagtcactacaattgcatcttctggaattgtaccctgtgctggagtcaattcaaaaatacctctggccacgtctctgcaagcttgatcaaagaacattatatgagttgcattaccatatgatcacttttggaaaggtcttctgttcaaaaagcaaacccaactgcaacgcatgtccaatgagaggagaatgcagacacttcgcaagtgcttttgcaagcgcaaggcttgccctgccagcaccagaagagaaaagtatagtgagtgcaacagagaacaatgcagctgaccagaatccattccagaacttcaatcaacagccgctaaccttaccccaggctaatcaaacacctttagagcatcccaaattgatcaactccgcacctattattgaggtgccagcaacaccacagcccattgtcgaagagcctgcctcacctgagccagagcaagatgctcccgaaatcgacattgaagatgtttgctttgaagatcctgatgaaattcctacaattgaattgaatatggcgcagttcactcaaaatgtgaagaactttgtgcaaaacaatatggagcttcaacaggtcgaaatgtcaaaagccttagtagctttaactccagcagctgcttcaattcctacacctaaacttaagcatataagccggctcagaactgaacatcaagtatatgaacttccagattctcatcctcttcttgaagggttcgagaaaagagaaccagatgatccatcctcctatcttctggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0100J12.1" temp_strand="+" temp_description="C09HBa0100J12.1  EU139070.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0100J12 upload_account_name:spain">
        <position start="40271" stop="43425"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40571" g_stop="40698" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="128" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40699" i_stop="40822" i_length="124">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.871" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="40823" g_stop="40902" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="129" r_stop="208" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="40903" i_stop="40988" i_length="86">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="40989" g_stop="41073" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="293" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="41074" i_stop="41153" i_length="80">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.839" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="41154" g_stop="41245" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="385" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="41246" i_stop="41320" i_length="75">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="41321" g_stop="41389" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="454" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="41390" i_stop="41686" i_length="297">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.889" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="41687" g_stop="41723" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="455" r_stop="491" r_length="37" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="41724" i_stop="41806" i_length="83">
            <donor d_prob="0.974" d_score="0.00"/>
            <acceptor a_prob="0.470" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="41807" g_stop="41889" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="492" r_stop="574" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="41890" i_stop="42332" i_length="443">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="42333" g_stop="42797" g_length="465"/>
          <reference_exon_boundary r_type="cDNA" r_start="575" r_stop="1039" r_length="465" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="42798" i_stop="42924" i_length="127">
            <donor d_prob="0.791" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="42925" g_stop="42961" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="1040" r_stop="1076" r_length="37" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="42962" i_stop="43081" i_length="120">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="43082" g_stop="43125" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="1077" r_stop="1120" r_length="44" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0100J12.1" gen_strand="+" ref_id="SGN-U319729" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1120</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0100J12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U319729" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40571" e_stop="40698"/>
          <exon e_start="40823" e_stop="40902"/>
          <exon e_start="40989" e_stop="41073"/>
          <exon e_start="41154" e_stop="41245"/>
          <exon e_start="41321" e_stop="41389"/>
          <exon e_start="41687" e_stop="41723"/>
          <exon e_start="41807" e_stop="41889"/>
          <exon e_start="42333" e_stop="42797"/>
          <exon e_start="42925" e_stop="42961"/>
          <exon e_start="43082" e_stop="43125"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGAGAAAAGACAGCAAACACAATGGATTCACTAGACTGGGACGCAGTGAGGTGTGCAGATGTCAATGAGATATCCCATACCATTAGAGAACGGGGGATGAACAATATGCTAGCAGAGAGAATCAAGGTACATCAGTGAAAATTGCAATTAACAGCCTAATTGTTTTAAAATCTGGATACCTCCATTATTCATCTACCAAAGTAATTCCCTAACCTTAAGAGACTGTTCAATGGAAACTGAACAATTGCAGGATTTCCTTAATCGGATTTTTAGAGAACATGGAAGTATTGATCTTGAATGGCTGAGAGACGTTCCACCAGACAAAGCAAAGTAAGCTTTCAATTGACCAAATAATTTCTTCCATGTTTTATCTATTCCTCTGCACTGACTAAACAAATTCACATGCATGGTATCAGAGAGTATCTACTAAGCATCAGGGGCTTGGGCCTGAAGAGCGTAGAGTGTGTGCGACTTTTAACACTTCACAACCTTGCTTTTCCGGTAAGATTTCTGAACCAATTATTGAAGACATAATTAATATGAAATGACCCGTGTTTCTCACTAATCATGTCTTTTATAAGGTCGACACAAATGTTGGGCGTATAGCTGTTAGACTGGGATGGGTGCCCCTGCAGCCACTGCCAGAGTCACTACAATTGCATCTTCTGGAATTGTGAGTATCTTGTGTAGTGTGTATATAAAGAATTTCCAAAATTGCCTACACAGTCTAACTCTGCTATTTCTTCAGGTACCCTGTGCTGGAGTCAATTCAAAAATACCTCTGGCCACGTCTCTGCAAGCTTGATCAAAGAACATTGTAAGTAACATCCTATTCTCTATCATTTTGCCCAGCCTGGTTGACAAGCATCAATTTACTATTAAATGTAAGTGGTTCCATTTCATCTTATTGAAACATCCAATTGTAACAGTATACTGCATAGTGGATGAAAAGATTTTGATTTTAAGGAAGTGCAGAGGGACTTGTAGATTAGGGTAGTTGATTTCTTCAAAGGGAGAAAAAATAATATACGTGCATAGTACTTGTAACTAAAAAAGATATTTTTTCTTCTAATAAAGCAATGCATTTACTGATTCAAATCCTACTTGATTACAGATATGAGTTGCATTACCATATGATCACTTTTGGAAAGGTATGTCTATACCACTAGTTACTCTCCCCTAGAACTAGCATCTGCAATCACAGTTTAAATCAATTTCATGGCTACTTCATTAGGTCTTCTGTTCAAAAAGCAAACCCAACTGCAACGCATGTCCAATGAGAGGAGAATGCAGACACTTCGCAAGTGCTTTTGCAAGGTTTGCCTATTATTCTATATACTTTCATGCAAGAAATTAGTTCTCTTGTTTGTCTATCTTTATTGCTTCTTCTCAAGCTTCTCGACATCTAATCCAAAGAACCATATCCAGAATGTGGCTGCTGAAACTAGATTTGACAAATCTATTTACTCTTACTCAGACAACATAAAATTTGCACTTAAGCTAACCTGGTAGTGTTTTCACTCATCCATGAAGCGTATGACATACTGTCAGTCACTCAGTGATGAAGCAACTCTAGCAGAAACTTTGAAATTCACGGATCTCTTCTTGTATAAGATAGAACTCCTACATTTTCAAACTTAAGCTAATACCCTTCTTGTTAGCACATTCAAGTAATGCATTCTAACTAGATTAGTAATTTCATAGTCTAAAATTGAAGCACTGTTTTTTCATATATGATACTTGACACATTTCTCTTTCAGCGCAAGGCTTGCCCTGCCAGCACCAGAAGAGAAAAGTATAGTGAGTGCAACAGAGAACAATGCAGCTGACCAGAATCCATTCCAGAACTTCAATCAACAGCCGCTAACCTTACCCCAGGCTAATCAAACACCTTTAGAGCATCCCAAATTGATCAACTCCGCACCTATTATTGAGGTGCCAGCAACACCACAGCCCATTGTCGAAGAGCCTGCCTCACCTGAGCCAGAGCAAGATGCTCCCGAAATCGACATTGAAGATGTTTGCTTTGAAGATCCTGATGAAATTCCTACAATTGAATTGAATATGGCGCAGTTCACTCAAAATGTGAAGAACTTTGTGCAAAACAATATGGAGCTTCAACAGGTCGAAATGTCAAAAGCCTTAGTAGCTTTAACTCCAGCAGCTGCTTCAATTCCTACACCTAAACTTAAGCATATAAGCCGGCTCAGAACTGAACATCAAGTGTAAGTGGATGCTCCAAATAACTTCTGATAGATCGCCAATGCAGTAGGGTAGCCAATTTTTTCCTAGGCTATAAAATTCTCGTAAATTTGTTTTTTTGCTTACTATCAATTGTTTCTCCACCCACAGATATGAACTTCCAGATTCTCATCCTCTTCTTGAAGGGGTCAGTTTTTCTTTTCTATTTTTGATTGGTTAAATACTAAGTTGTAAATCCATATATAAGCAGCATGTAAGCTTATATTTAAATTGATCCTCCTGATAATTACATCTTTTCATGTTGCAGTTCGAGAAAAGAGAACCAGATGATCCATCCTCCTATCTTCTGGC</genome_strand>
        <mrna_strand>AAAGAGAAAAGACAGCAAACACAATGGATTCACTAGACTGGGACGCAGTGAGGTGTGCAGATGTCAATGAGATATCCCATACCATTAGAGAACGGGGGATGAACAATATGCTAGCAGAGAGAATCAAG............................................................................................................................GATTTCCTTAATCGGATTTTTAGAGAACATGGAAGTATTGATCTTGAATGGCTGAGAGACGTTCCACCAGACAAAGCAAA......................................................................................AGAGTATCTACTAAGCATCAGGGGCTTGGGCCTGAAGAGCGTAGAGTGTGTGCGACTTTTAACACTTCACAACCTTGCTTTTCCG................................................................................GTCGACACAAATGTTGGGCGTATAGCTGTTAGACTGGGATGGGTGCCCCTGCAGCCACTGCCAGAGTCACTACAATTGCATCTTCTGGAATT...........................................................................GTACCCTGTGCTGGAGTCAATTCAAAAATACCTCTGGCCACGTCTCTGCAAGCTTGATCAAAGAACATT.........................................................................................................................................................................................................................................................................................................ATATGAGTTGCATTACCATATGATCACTTTTGGAAAG...................................................................................GTCTTCTGTTCAAAAAGCAAACCCAACTGCAACGCATGTCCAATGAGAGGAGAATGCAGACACTTCGCAAGTGCTTTTGCAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAGGCTTGCCCTGCCAGCACCAGAAGAGAAAAGTATAGTGAGTGCAACAGAGAACAATGCAGCTGACCAGAATCCATTCCAGAACTTCAATCAACAGCCGCTAACCTTACCCCAGGCTAATCAAACACCTTTAGAGCATCCCAAATTGATCAACTCCGCACCTATTATTGAGGTGCCAGCAACACCACAGCCCATTGTCGAAGAGCCTGCCTCACCTGAGCCAGAGCAAGATGCTCCCGAAATCGACATTGAAGATGTTTGCTTTGAAGATCCTGATGAAATTCCTACAATTGAATTGAATATGGCGCAGTTCACTCAAAATGTGAAGAACTTTGTGCAAAACAATATGGAGCTTCAACAGGTCGAAATGTCAAAAGCCTTAGTAGCTTTAACTCCAGCAGCTGCTTCAATTCCTACACCTAAACTTAAGCATATAAGCCGGCTCAGAACTGAACATCAAGT...............................................................................................................................ATATGAACTTCCAGATTCTCATCCTCTTCTTGAAGGG........................................................................................................................TTCGAGAAAAGAGAACCAGATGATCCATCCTCCTATCTTCTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U316110" ref_strand="+" ref_description="SGN-U316110        Tomato 200607 #1 [5 ESTs aligned] arabidopsis/peptide: AT5G03730.2 | Symbol: None | serine/threonine protein kinase (CTR1), identical to serine/threonine-protein kinase CTR1 (Arabidopsis thaliana) SWISS-PROT:Q05609 | chr5:974507-979848 REVERSE | Aliases: None (evalue: 0, score=979) genbank/nr: gi|40781634|gb|AAR89823.1| CTR1-like protein kinase [Lycopersicon esculentum] >gi|40781628|gb|AAR89820.1| CTR1-like protein kinase [Lycopersicon esculentum] (evalue: 0, score=1545)">
      <seq>aagcttataaacgaatcaaattaatatacacatacttttctgacatatttatacatttaatattccgatgtgcttttaagtcaagtgcttactgttcttatgaactcaaatcagtcaaaagtcataagcttatcatctctaagtcgtaatttttcagcttataagcatttttggattgatcggaaacggaagaaagtgaggccaaatgggttgtaagagtaatacttgaaattatatagggaatcatttgaaatatgataaaagtagaggggagtttaatataattaagttaaacttataacttaaagtcgaaaattccaggaatattacgactaaaacaagacttcccccatcttttttttctctcacttctcattcgacaagtacgaagaagaagaagaaaagagagaaaacttttagtgagagaaagtctttgagagagagagggagttgaagctatagtgtaatgaacaatttctagctagggttttgttgaattgataaattattgagatggaaatgtctactagacgatcgaattatactttgttgagtcaagttgcagatgacaattaccttcctccgccaccgaagtactccgtcactggcggtggcggtggaggtggaggagtagcaccgtattatgagtctcattctggtgaaaagggtaaaggcaaaacaggtgataatagaggatttgattgggatttgagtgatcaccgtagtaatatgatgcaagcgtcgaatcggatcggtgcggcggcatttccaggttcgattggcttgcagaggcaatcaagtgggagcagctttggtgaaagttcgatctccggggagtattacatgccgtcgttgtctaatgcggaggcgtcatttggatatctcaatgatggcggtggcggtgctgaagtgaggatgaagccgttggaagctaatttgttcggtggctcgtcttctaagagctgggcgcagcagactgaggagagttatcagctgcagttagctttggctttacggctttcttccgaagctacctgtgctgatgatccaaattttttggatcatgtgcctgatgaatccgcatcccgtgcttcagcttcagctgcttcggcggagaccctttcccatcgattctgggtaaatggatgcttgtcgtactttgacaaagtgcctgatggattttacttgatccatgggatggatccatatgtctggattgtctgctcagatctacaagaaaatgcccgggttccatctattgaatcaatgagagctgttgatccctctgtagtaccatcagttgaagtgattttgattgatcggcgtacggatccaagcttgaaagaactgcagaatcggatccatagtctctctcctacttgtggcacaacaaaagaagttgttgatcagcttgctcagctggtctgcagtcatatggggggcgcaacttctgccggagaagatgagttggttcctttgtggaaggagtgtagttatgagctgaaggattgtctaggatccactgtgcttcccattggtagcctgtctgttggcctttgcaggtatcgagctttgctatttaaagttctagctgacgccattggtttaccatgtcgaattgccaaaggatgtaaatattgtaacagagctgatgcttcctcatgtttagttcgttttggacctgacagggagtacctggttgatttgattgggagccctggatgcttatgcgaaccagattcctcgctcaacggcccatcttctatctcaatctcttcaccattgcgatttccgagattcagagaagttgaaccgacaactgatttcaggtcacttgccaaacagtatttctcggattgtcaatcgcttaatcttgtgtttgaggaatcttcagcaggagctgctgttgatggagacgcaggacaaactgaccgaaataacattgagagaaacagtgctgtcactggtccaagtaaccgtgatgaagtttctcggttacctgtgcctgcaattagggacatggctcctgtgaagtatgtccgtccagttttgcatggagatacacaattatcagacccaagagatatagggaatgatatgcgatttcttgagagaggaagtcaacttgttccctctaaaataagtagagacattgcccttgaaatagaagattttgatataccctgggaagatcttgttctgaaggagaggattggggcagggtcttttggtactgttcaccgtgctgattggaatggttctgatgttgctgtgaagatactcatggaacaagattttcatgcagagcgattcaaggaatttttgcgggaggttgcaattatgaagcggttgcgacacccaaatattgtgctttttatgggtgcagttactcagcgaccaaacttgtccatagttacagaatatttatcaagaggtagcttatatagacttcttcataaacctggtgctagggaggttttggatgaaaggcgtcggttgtctatggcatatgatgtggcaaaggggatgaattatctacataaacgcaatcctcccatcgttcatagagatttgaaatctccaaatcttttagtggacaaaaaatacacagtgaaggtctgtgattttggcctttctcgtttaaaagcgaacacatttctctcgtcaaagtctgctgctgggactccggaatggatggcacctgaagttcttcgtgatgaaccatcaaatgagaaatctgatgtatacagctttggtgttattttgtgggagctggcaacgttgcaacagccttggagtaatttgaacccagcacaggttgtagcagctgtgagctttaaggggaaaagactcgacattccacgtgacttgactcctcaagtggcaagcattatagaggcttgctgggccaaagaaccatggaaacgtccctcctttgctgcaatcatggatatgctgagaccactaattaaacctcctgtaacacctcctcaaccaggccgtacagacacgcagttgattgcgtgaatgcgtgtaatagatgtatgatttctgcacatatttggcattctttgttaatcatcttctgggaggaacaaatctttgtttacttcaggcttttgttccgtacatattagttcagaatgcccgtctagagccattttttttcttcacaaattcaagcagccatttctcccagaagagcatttgcaattgacttgtacgtttcctcgtggaaataatgtctagccatatgattttgttaatgtaagcaaataacagttcttctattttctatcaagaaatgattttgtacgtacaagaatttataatgggaatgcacagttcgtatcaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0100J12.1" temp_strand="+" temp_description="C09HBa0100J12.1  EU139070.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0100J12 upload_account_name:spain">
        <position start="52430" stop="68580"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52730" g_stop="53870" g_length="1141"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1137" r_length="1137" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53871" i_stop="59631" i_length="5761">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59632" g_stop="59933" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="1138" r_stop="1439" r_length="302" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="59934" i_stop="60020" i_length="87">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60021" g_stop="60165" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="1440" r_stop="1584" r_length="145" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60166" i_stop="60418" i_length="253">
            <donor d_prob="0.925" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60419" g_stop="60522" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="1585" r_stop="1688" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="60523" i_stop="61785" i_length="1263">
            <donor d_prob="0.939" d_score="1.00"/>
            <acceptor a_prob="0.678" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="61786" g_stop="61994" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="1689" r_stop="1897" r_length="209" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="61995" i_stop="63999" i_length="2005">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="64000" g_stop="64117" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="1898" r_stop="2015" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="64118" i_stop="64205" i_length="88">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.805" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="64206" g_stop="64411" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="2016" r_stop="2221" r_length="206" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="64412" i_stop="64551" i_length="140">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="64552" g_stop="64592" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="2222" r_stop="2262" r_length="41" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="64593" i_stop="64887" i_length="295">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="64888" g_stop="64956" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="2263" r_stop="2331" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="64957" i_stop="65099" i_length="143">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="65100" g_stop="65200" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="2332" r_stop="2432" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="65201" i_stop="65283" i_length="83">
            <donor d_prob="0.353" d_score="1.00"/>
            <acceptor a_prob="0.415" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="65284" g_stop="65368" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="2433" r_stop="2517" r_length="85" r_score="0.988"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="65369" i_stop="65442" i_length="74">
            <donor d_prob="0.570" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="65443" g_stop="65541" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="2518" r_stop="2616" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="65542" i_stop="66363" i_length="822">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="66364" g_stop="66432" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="2617" r_stop="2685" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="66433" i_stop="66531" i_length="99">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="66532" g_stop="66663" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="2686" r_stop="2817" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="66664" i_stop="67433" i_length="770">
            <donor d_prob="0.710" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="67434" g_stop="67528" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="2818" r_stop="2912" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="15">
          <gDNA_intron_boundary i_start="67529" i_stop="67616" i_length="88">
            <donor d_prob="0.955" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="16">
          <gDNA_exon_boundary g_start="67617" g_stop="67819" g_length="203"/>
          <reference_exon_boundary r_type="cDNA" r_start="2913" r_stop="3115" r_length="203" r_score="1.000"/>
        </exon>
        <intron i_serial="16">
          <gDNA_intron_boundary i_start="67820" i_stop="68041" i_length="222">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="17">
          <gDNA_exon_boundary g_start="68042" g_stop="68281" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="3116" r_stop="3355" r_length="240" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="3356" polyA_stop="3371"/>
      <MATCH_line gen_id="C09HBa0100J12.1" gen_strand="+" ref_id="SGN-U316110" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>3359</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0100J12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U316110" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52730" e_stop="53870"/>
          <exon e_start="59632" e_stop="59933"/>
          <exon e_start="60021" e_stop="60165"/>
          <exon e_start="60419" e_stop="60522"/>
          <exon e_start="61786" e_stop="61994"/>
          <exon e_start="64000" e_stop="64117"/>
          <exon e_start="64206" e_stop="64411"/>
          <exon e_start="64552" e_stop="64592"/>
          <exon e_start="64888" e_stop="64956"/>
          <exon e_start="65100" e_stop="65200"/>
          <exon e_start="65284" e_stop="65368"/>
          <exon e_start="65443" e_stop="65541"/>
          <exon e_start="66364" e_stop="66432"/>
          <exon e_start="66532" e_stop="66663"/>
          <exon e_start="67434" e_stop="67528"/>
          <exon e_start="67617" e_stop="67819"/>
          <exon e_start="68042" e_stop="68281"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCTTATAAACGAATCAAATTAATATACACATACTTTTCTGACATATTTATACATTTAATAAAATATCCGATGTGCTTTTAAGTCAAGTGCTTACTGTTCTTATGAACTCAAATCAGTCAAAAGTCATAAGTTTATCATCTCTAAGTCGTAATTTTTCAGCTTATAAGCATTTTTGGATTGATCGGAAACGGAAGAAAGTGAGGCCAAATGGGTTGTAAGAGTAATACTTGAAATTATATAGGGAATCATTTGAAATATGATAAAAGTAGAGGGGAGTTTAATATAATTAAGTTAAACTTATAACTTAAAGTCGAAAATTCCAGGAATATTACGACTAAAACAAGACTTCCCCCATCTTTTTTTTCTCTCACTTCTCATTCGACAAGTACGAAGAAGAAGAAGAAAAGAGAGAAAACTTTTAGTGAGAGAAAGTCTTTGAGAGAGAGAGGGAGTTGAAGCTATAGTGTAATGAACAATTTCTAGCTAGGGTTTTGTTGAATTGATAAATTATTGAGATGGAAATGTCTACTAGACGATCGAATTATACTTTGTTGAGTCAAGTTGCAGATGACAATTACCTTCCTCCGCCACCGAAGTACTCCGTCACTGGCGGTGGCGGTGGAGGTGGAGGAGTAGCACCGTATTATGAGTCTCATTCTGGTGAAAAGGGTAAAGGCAAAACAGGTGATAATAGAGGATTTGATTGGGATTTGAGTGATCACCGTAGTAATATGATGCAAGCGTCGAATCGGATCGGTGCGGCGGCATTTCCAGGTTCGATTGGCTTGCAGAGGCAATCAAGTGGGAGCAGCTTTGGTGAAAGTTCGATCTCCGGGGAGTATTACATGCCGTCGTTGTCTAATGCGGAGGCGTCATTTGGATATCTCAATGATGGCGGTGGCGGTGCTGAAGTGAGGATGAAGCCGTTGGAAGCTAATTTGTTCGGTGGCTCGTCTTCTAAGAGCTGGGCGCAGCAGACTGAGGAGAGTTATCAGCTGCAGTTAGCTTTGGCTTTACGGCTTTCTTCCGAAGCTACCTGTGCTGATGATCCAAATTTTTTGGATCATGTGCCTGATGAATCCGCATCCCGTGCTTCAGCTTCAGCTGCTTCGGCGGAGACCCTTTCCCATCGATTCTGGGTATGGTTGGGTTATTGTTTTGTGTTGATTTTCCTTGTCGTCTATATTTATTTTCTCTGTCAATTGCCTTAATCCAATTATGATTTTAGCTGCAACAGAGGGAAATGTGTTCCTATTATGCTTAAGGTATGTGTTGAATAATTAGCATTGTACACACAAAAAAAATAGCTTGGTTTAGATTACAAATGATTCCAGGCTTTGAATTAGGTAACAGTTTGATGTAAAGGAAATGTTTTCCTTGGATCAACTAGGACTGTTTCGTTGGGTATATGTAGGTGACATAGACTACTTTTAGTCTTGTAGAAGTGGACTATATGGTGTTATGGTAGTGTTTTGGTGATACTTCTGAGTTCTGAGTATTAATAAAGGTTGACAATAATGTAGTAGTGTGGAAAAGTGGGAAAATGACTTCTGTCAAGAAGCAAGGGAAGCCATCTTTTTGTTTGCTGAGAAACTATTTATTGGGTAAGGTGATATTTTCCTGGAAAGTGTTTTCCGTCATACCAAACACAGAATCGACAAATGGATGTGTTCCTTCAAATGTAAGTGCACTGAATCAGTTTTGATAATATTTAAACTACTAGATCCTTTCATAATTTAAAGAAAGATATGTAGCTTCTATATTATTACTGCATCCGGATAGTTCTAGAATACTAGAATATGTCGAGACTAATGCGTCAAGTAATGTGGAGGTCAAGAACAAATTTAATGCTTTTAGTTTCTCAGATGTTTGCGAACATCTCAAGCTACTCTGGAAGTGGAATTGTTGTAGTCGATATAACTGATGCCCATTTTTGTTCTCCACAAAGAAATTGGATGTTTTCTCTATGTAAAGTCTGTATGTCAGTTCTCTTTCTCATTATATAATGCTACACCAATGTGGAATGGGTTCTTTCTAAACCTGCAGTATATAATTAGGGATCATTTGGTAGAGTGTATAAGAATAATTCTAAATAAGGTGTATTGGTATTACTGATATTGGTTATGCTTGCATTAGTTATGCGGAGCTTATGCAGTGTTTAGTTTGGTGTATTAAAAACAACATTCATTGCATATTTCAAAAAAAGTTTTATTTATTACAAAAATACCTTTATTTTGAAAATTGAGAAATCCGTCGGTTACCCGCCGCCATTTGGACAATGGAAAGGATGTGAAGAGATTTTGAGGGGTAATAGTGTCTTTACCCTTGCTAATGTATGCATCAGATCCCTTGACTCTCTGCACTTGATGCACCTACAACTTGAGCACTATTTTATAAGGGAGCTATGTTTACCTGTTCTGACGTGAATTCTTTGCAACAAATTCATATCCTTACTGAAACTGTGATGTCAATGAACTTTCATTTATACATAGTTCAACTAGTAAAACACGTAGAAGTTAATAAATGTCTAAGCCCTTTACTCTATGTTGCTCACACTCTTCGATAATGTCGACGTGTGCGTGTAAGATCCTCCAAAATAGTGTATTTTTGAAGGATACAACACAGGTGCGACACATTTTTGGAGAGTCCGAGCAACCTAGCTTTTACTGTTTTGAAACATTGTATAATGAATCAATGTGTATGACACAAACTATCGAGATTATTCCCTTTATCAGTCTATCATGAGATCCATACTCGTTTTACGTACATCATGTACATATTGATGAAAATGAATCTAAGATCCATTTTCCAGCTAACACACCCTATATCCAAAATAATATTGCAATATGGGAATTAATGCAAAATTTATGACCACTCCAACAATTAGTTAAAAAGAGGATTATAAAAATTCCTTGCAATTGTGTTTTAGTAAAAGAGGTCTAGAAGTAGAATAAATTGATTTGTTTTGAGTTTGAATTTTAATTTTTTAGTATGAAGTAGATCAAACTATATTCATCAAAGAAGATAAAGGATTTTACATTACACGGTTTCACAAGATGTTAAGGGAAATCTTTTGGTTATTGATCAATAATCATGTTTTTCATTATGTGTTAATGAAATCTTTTGCGTACTAACTAAAAAGAAAACATATTTGTGGAAATGGAGAAGAACTAAAGAGTGTAGATAAAAGTTTCTCTTTTGGAGAAGTGGACAAAGGTTTGGATAAGTGAAAAAAGAAGGGGTTTTATTTTCGGATCAGATGAGTAGAAGATATCTACAAATATTATAGTGTATGAGATTGTTTGTTGTTGTATTGCATTTAACACATAAATATTCATTTTTTGGGTGTTGATTGCCTAGGTTAGACTTAGATTAGTTCAAGTCTAATGACATACATATTTCGGGTGTTGATTACCCTTTTGATCGTTTCTCTTATTCCCAAACCTTACAAATGTCGGCAGGAATGTAAGGGTGAAATGAAGTAATTCCATAAAAAATAGATTATAGAAGAAAATGGCTAGAAGACGATTCACTATTTGGCGCCCTAGATAAATATGCAAAGAATCTTGAAGCCGAAGGTCACAAATCACAATTTAAAACAATGTTATTTGTGTGGTAGAAAAAATTGGAAGAACATAGTAAAAATGGAACCCATGTCCAACAACAATAACATACCCAATGTAGTGTAGTCCCACAAGGTGGGATCAGGGGTTAGGGTATATACAAACTTCACCCATATCTCACACATAGAGAGTTGTTCCCGAAAAGACTCCGACTCAGTAACGCATATCAAAGAACATATAGAAGAAAAGTGTTATAACAAGTACTGGAGGAAAAATCAAATGACATATAGGAAAAGAAATAATAACATAAAAAGGTAGTGCAATAATCAAACAACAAGACACAATTGGTAGTAACATAAATCGTAGAATAAAGAATTACGCCAAAAAGTTAATACTACTAGTATTAAAAGAGAAACAAAACGGGGTGCCAAACTACCACCGAGCGTGATCATAGGAAAGCGAGACAACAATCAACTATCTATTAACCTTTTATCCTAGTCAACAACCTCCAAATCCTTCTATTTAAGGTCATGTTCTCGCTGAGCTGAAAATGCGCCATAACTTGTCTAATTACCTCTCCCAATACTTTTTCAGCCTACCTTTACACTTCCTCGAACCCATTATTACCAACTTTCTGCACGTCTCACTAGGCCTCTCCACATACTTGAATCGTCTCTATCTCACTTCTATTCTTGTCCACCACAGTGGCTACTCCGACCTTCTCCTGGATGTCTTCATTCCTAATTTTATTCTTCCTAGTATGTCCACATATCCACCATCACCGATCTCCCCATTTTCTTGGAATAAAGACCTAAGATACATGAACTTTCTTTCCTGGGGATGACTTGCATACCAAGCTTTACTTACACGATAAGTTCTAGTGTTCCAAGCATCATACTATTTGAATGTCTAGTTTTTATTCAGCATGAACTAAATTAGGAGTAGAACTTGTGAATTATATTAAATATCAATTGCGAGCATGTTGAGTTAATAGTCGTCTTTTACTGTGTGGTTAAATTAGGACAGAAGAAGACAAGAAGTGGAATATAACAATTTGTTAAATTACCTTTATGGAAAGAGGAATGTGTAGTTTGATAGAATGTTGAAGTGAGTAAAAATGTGAAATTTTCACATATGAAGTAAAAAGCATATCGAGTTTGTAGCTCCTTTTTACCCTTTGAAATTTAAGATGGATGAAGGTGGAATTATAATAAATAGTTTAACCTCCCCTTTAAGACATTATAAGTTATGTACTAAATTGAATGCTCAGATTAGTGGCTCTATCATAAAGATTAGAACATTCATTCTCTTTCTTCTATTCTATATTAACAGAAGTCTAGACAATGTCCCATACAAAGAAATAATCATTAACTATTGAAAATATTAATATTGTTTTCATCATACGAATGTCAAATATCTACTAACCATAGGCTTGATATTTGACCATGAATCTTGCCAAAACTATTGGCAGCATATAGTAGAAGTATTTGGTAGCGGATTCACAGGTGCCATTGCAAAAAGCAAATGTAATGAAGAGGTGGAAGTTGGGACATTGATGACTTCACATTTTACATGATAAGTTAGGGAGGGCCTTTCTACTCTATCAAAGCAAAAAGACTCGAGAGACGCTTATAATGCCTGTGAAGAACATGTCTCTACCCTCGATCAGTGATCTTGACATCGAGTTTTGGAATAGAGAAACTGTTGGCAAGGAGTGTTACCCCTTTTTGTGGGCCATATGTGAGGTGATTGGTATTCTCATGCCAATGGGTTTTGCATACTAGATGGTTCGACTATTCCATCGAGTACATGCTATTTCCATTTAGCACAAGTATTGAGTAATTTTGTTTAAGGCTTAAGACATGGGCAGATGTGAAGAAATTACTTATCGTCCTTTGTGTCTGCTACTAGGATTTGAATCCTGATCTTTTATGTTTTTCACCCTTGTTGTACTAAATTCAGCGGAGAAACTTTTGGATCTTTGTGGTAATGTGCCAAAACCCTTCGAAAATATTTCCTAATGTTTTTGTTAAATTAGGTCTTAGGCCTAAATCACACTCCAAAAACTAACTCAAAGGGAGTAGGATTGCCCAAGCCTTATAAGGAGTCCACCCATCTCATTAACCATCAATGTGGGGGGTTTTGTTATTCTTTAACACCCCACCTCACGCCCAGTGCTTTGCATTTGGTGCGTGAGCAATTTGATTTTTTGAGCCCCAACATTGGATGAGACGGGCCCTGCTCTGATACCATGTTAAATTAGGTTTAAGGCCTAACTTACACCCAAAAGCTAGCTCAAAGGGAGGAGGATTGCTCAAGCCTTATAAGGAGTCCACCCATCTCATTAACCACCAATCTGTTCATGACAATTATACTTACTAGGCGACAAAATGGATTTCAACTTTATTGATTGCTAGGCCTCACTTGGGTTAGAGAAGAACATGTCATTTTGAGTGGAATAAAAAATCGACGAGCACGTGATAGCTGATACAATATGTATGCGTTGTTTCCTAAGTTCATTGATAGTATCTATGTTAGTATCAATGAAAACCTTGCTTGATAAGAAGAGTTCATTAATAGTATCTCATAAGCCGGTTTTTGTGTATATTTCTAATAAAGATTTTTTTTGACAAAATATTCCTCATAAAGATTTATTTTCCAATACTAGAATCTTTTGCGGAAGTAAGAGTAGAGAGGAAGGACCTAGGTATTGAATTAGAAGCCTCACAAAGGAGCTCTCGATGAGTTCAATTGGTGAAAAAATTTACTCGATTGTCTCAATCGGCTCATTTTGATACAATTTTCTATATCTAGAAGTGTTCGATCTTTCTTGTATCTTGTATTGGAGATATGAATTGATGCATGTAAATGCAGGTGAAGAAATTTATGAGGAAAGGTGCGTTCTTGTTTCATGAAACCTTATTGGTGACCGTTCTTTACTTTTTGATATACTGCTTGTATACATGAATTTTGGTAACATTTTGATAGAATTATTTACGTTATTTGTCCTGCATCAGTCCCTAAAAATGGTAAAAGCATGTTGATCACTTCTTCTGTGTCAGGTGTTTCTGTGCAAATAGGAACAACTAATAAATAGTGTCATTGATGATTTTGAATCTTGTCATTCTAACCAGTCGAGCAAGAGCATTTATTGTTTTCTATTTTTTGGTTATACATTATGTTATCATTTTCTGGCTGCTTATTGATTCTATTTTTTATGTTATGTGTTTATGTTCTTTTAGTCTCTCTTTCTTTGATCGATTCAATCATGCTTTCCAGGCTTCCTAGGTTTTTTGCTGAAAACCATTTTCTGCTTTGAATCGTTGTTCTGTACCAGGTAAATGGATGCTTGTCGTACTTTGACAAAGTGCCTGATGGATTTTACTTGATCCATGGGATGGATCCATATGTCTGGATTGTCTGCTCAGATCTACAAGAAAATGCCCGGGTTCCATCTATTGAATCAATGAGAGCTGTTGATCCCTCTGTAGTACCATCAGTTGAAGTGATTTTGATTGATCGGCGTACGGATCCAAGCTTGAAAGAACTGCAGAATCGGATCCATAGTCTCTCTCCTACTTGTGGCACAACAAAAGAAGTTGTTGATCAGCTTGCTCAGCTGGTCTGCAGTCATATGGGGTAAGTGCCAGAAACTTCTTTTGACTCCGATAAATTACTTTTTTTGTGTGTGTTTTCTCCTTTTTGTAATTAAGTTTTATTTCTTAGGGGCGCAACTTCTGCCGGAGAAGATGAGTTGGTTCCTTTGTGGAAGGAGTGTAGTTATGAGCTGAAGGATTGTCTAGGATCCACTGTGCTTCCCATTGGTAGCCTGTCTGTTGGCCTTTGCAGGCATCGAGCTTTGCTATTTAAAGTATGTTCTAGATGTGATCTACTGATTTTTAGTTTGCTGTTTTATTCTCAAGATTTACTTACACAGGAATTTATGGATCAGCATCTGATGAATGGCGTTCTTTTAAAAAAAACTAAAGAAAAAACATGTTTTTTGCAAATTGTTGTCTTCTCTCCTCTGTCAGAATAAATGTACGTTCAATCAGGAGTTTCTTAGTTTTGGTGGTACGATGGAACATTGATGTGATATCATGAATTTCACATGATTGTTGCAGGTTCTAGCTGACGCCATTGGTTTACCATGTCGAATTGCCAAAGGATGTAAATATTGTAACAGAGCTGATGCTTCCTCATGTTTAGTTCGTTTTGGACCTGACAGGTGCGAATCCAAATTTTAAATAATCTCGGAGTATATTATCATTTCATCCCCAAACTTGCATATTTGAGGAAAATTATTTTGTTAGCCATGTTTGTTTAAATATATAAAGCAATGATAGATGGAAATTGATGTTCCAACTTCCCTTCTGTTTCAAAAACCATTAATATGTATTTTGTTTGTGATAATCAATTTTTCCTTCCCTACTCATATATTCCTGTGCAGTTAACATGTGCAATTTATATGGACTTTGATCGTGTTGCCTATATCTTACCTCGTATTTAGTGTATAATATGGCCAACTTCTGAATTTCTTAATCTTTCTGGTTTAAGCTTTCTTTGAAATGCATAGAGCTAGTATATCTGTAGAAACTGAACTTAATATATTCATGTCTGGGAGATGAGAATGATGATGTTTTGAATATTTTTGTGTGGTCTTTCTGCATTCATGCTGCAAGAGATCTGTAAAGATCAGTCACTGTATGTAGTTCATGACCTATGTTGGTACTTGGTACTAACTGAAGTTTCTCCTTCGTCCTGATAGCTGCTCCTCTTAGTTCTTTTTGTTGTTGGAAAAGCCATATTTATTTTTGGTTTTTACAATATAACTACTGCAACCTCGGTGCCAAAAAGAACGGTGGCACTTCGAGTAAGTGGCACGCTGCATTCAATATGAATTCAGACATGGTTCTCTGAATGGTTTCTAGAGAAAAATTATACATCTAGAGACTGCATAAGGGTACTACATATGAAATTTTTTTAAATGGCTAACATTGTTTTTATAAAAGATTACATAAAACATCGTAATCAAAGAAAAGGTTGTTTGATTCCTCCAAATAGTAATGCTGCCATTCTTTTTGGATCAAAGGAGGAGTATCTTGGGGTGGTGATAGGAATCTTAATATTTGAAAGAACAGATCCCATTATTAAAGGAATACCTTATACACTTGTAATATAATAGATTCTCAATTTCGTGATTGAATTGCAACGAGATGTCCTCCTTTCTTCTGCTCAGCCCTAAAATGTGGAGGAGAAGAAATTAAATGGGGAAAAGTATAAGCAATTAAAATTAGAGATTGTGTAGCGAACAGCAGGATACTATTTTTCTATGCTACTTTCAAGTTTCAACTAGGATTTAGCCTGAAAAAAAATGGCGGTTCTTGTAAAGAAATGCAAGTGTTAGTTCTTCTTTACACAGTTAGATATATGCGATTTCTATTGATTGTTAAAGAGAACAGAGTCTTGATTTTCGCTCTTCACCATATAGGGAGTACCTGGTTGATTTGATTGGGAGCCCTGGATGCTTATGCGAACCAGATTCCTCGCTCAACGGCCCATCTTCTATCTCAATCTCTTCACCATTGCGATTTCCGAGATTCAGAGAAGTTGAACCGACAACTGATTTCAGGTCACTTGCCAAACAGTATTTCTCGGATTGTCAATCGCTTAATCTTGTGTTTGAGGAATCTTCAGCAGGTTATCCTCTAAATCCTACCTGCTTTCATGAGCAAATACATCTTTGCTGCTTGTTTTGGTTGTTTCCCGGATGTTAAGCTTGGTGTCTGCGATATTGTGATGAGAGATGTTCAGTTCACGCATAATTTTATAATGGCTTCAGACAGATGTTTCTCGGTTCCTAGCCAAGAAGAAATATCCTATTTCCTCGTGTTAAATGTTCCTCTATTTTTTTTCATAAAAAAAAGTTTAAATCTTTTATCTTTGGATCTGAAGGGTTATCCTTGGTTTCTCTAAACATATACTAGAAAAACTCAAACCTTATTAGTATTTATGGTATAAGCATTTCCCTAAAAATTTTGGCTGTACTTATTTGTCCTATTTTTGAAGGGCATTCTTTACAACTGGTTTCCCGACTTTTCACTCCCGGGCTTCCCAATTCCCATTACTAGTTGTACTTAAACAAACCTACAAGCATATTTGCTTTCTCAGAATTCACTCACCATTGTCTCTTCTACATGATGTCACTACTATCTGACTGTAATTAAGCTGGAACCTCACTAACCATAAATTTACTTGTACCTACTAAAAAATAAGTAAAATAATAATGGAGATAACAATACAATTGTTTCTTTTCCCTCCTCCATTTTATAGGTTTTGATTTATGGCGACTTAAGTTTTATTTTTCAGCAAAGTGGAAACCAAGAATCTAAGGTTGTAGAAACTTATAAATATATGCCTCAAATCCCAAGGTAGTTGAGGTCTGCTATATGAAACTCACTGTCCATGTTGCTCCCTTAAAGACCAGTCTTAATTCAATTATTTGGGTTTTCTAACACTAGAAGTTCTCTACATTTTTTACTGGCAAAGAAATCTACGTTGAAGGTGTTCCATATTTTGAGGATACATCGTGAAATGAGAAGTTTTGTAGTGGCTGCTAACTTACTAGAACCCTCCTCATTTATTGGGCTTGAGATTGGCAAAGGCGAAGCAGCTATCTATAATATCTGTCTTTCTTCTCTTTTATTGTTTTATTGTCGTTTTATGTTCTATTCGGGGCAACACAGGTTGTGCTCTCCGAAAACATAATTTCAATTTTCTATTCAATTCAAAATTCAAATTGTAGTATGATACTTTTCTGATATCTGATAATTCTATATCGGGAACATATATAAATAATATATATCCGTCTAACAATTTATCTTGGGGGGTTCACATATACTGATAATTGTTGTTATAATTATTATTAATAATTAAAATTGAGAAGGATTTTTTGATTGCAAATATCCATACTGAACTGATTAGTTATATATTATATATCAAGTTGTATTTTGTTATATCATTAGGATCTTTGCTTTTAGAAAGCCAATTTGACCTCTTGTATGGTAAAAGACACCTCTAGATTACACAAGGTCCACATTTGTGAACCTTTGACACCCAGAGGTTTTCTTGGCTAATTCTCTGGTTTACTGTGATGTTTACCAAAAGGTTTGACTCAAATTAATGAAACTAAGATGTTGAGACATTCGTTTTTTTTAAAAATGACTCAACTAACAGAATATATTTCTCATTCTTTTCTAATGTTATTGTATTTTGTTTTCTTTCACAAACTATACTTCATAATTTACTTAGAGAAGTTGATTAGTAGCTGTCTCCCTACCCTGCAGCTGTGAGCTTTTATGATCCTAGTTGCTGTATTCTTCAGCATTGTGGACATGCTGGACACCATAAAAAATGTTATATTAAAAAATAAAAATAGAAAAGAAGATACTAACACAGATCTTAATAAATCTACAAAATGACCTATATTCTCTAAACCTACTTCTTTACACCAAAAGTAGAAAGATATTATACAATTCCATTTAACTTTTCTTAGTCACGTTTAGCATATCTATCTAGTTGCCTTTCCTCTTCCCATACAAATAAATATTATTATCTTGACAAACTAATTCCCTTGATTGTTTCTTGAATTTTATACCCAAACATGTTCTGTTTCAAGGTTCTTAATTAATATTGTTTGTCACAGGAGCTGCTGTTGATGGAGACGCAGGACAAACTGACCGAAATAACATTGAGAGAAACAGTGCTGTCACTGGTCCAAGTAACCGTGATGAAGTTTCTCGGTTACCTGTGCCTGCAATTAGGTAAAACGGTCTTGACGAAGACTGTCAACTTACTATTTACTAGTGTAGATAGTCCTCAAAATATCTTAAACTCAGTTAACATGGACAGGGACATGGCTCCTGTGAAGTATGTCCGTCCAGTTTTGCATGGAGATACACAATTATCAGACCCAAGAGATATAGGGAATGATATGCGATTTCTTGAGAGAGGAAGTCAACTTGTTCCCTCTAAAATAAGTAGAGACATTGCCCTTGAAATAGAAGATTTTGATATACCCTGGGAAGATCTTGTTCTGAAGGAGAGGATTGGGGCAGGTAATCCCTGCCTGCTATCTTTTGTATCCTCATTTTTAGTCTCGTGCTATGATTGTCTCAGTACATGTTAGTGATATTGGGATGCTAGAGTATCATAGCATCCTCTTCTCATGTACCTAACACTGATTGTTGCATCTCAGGGTCTTTTGGTACTGTTCACCGTGCTGATTGGAATGGTTCTGTAAGACATCTCCTTTTAGTTCTGCATCCTTGATACTCGTTTTTGTTATATCAGTTAACTCATTTAGCACTTCGGAGAAGCATTTATTCAGTGTAATTTTTGTAAATGATTTGGGTGTTTATTTATTTCTATTTTGTTTTTGGCCTGATCCACTTCTCGAATAAATGTTGTTGGTTTATCTGTTGATCTCTCTCTTTTGTTTTCCTTATTTGAGATTATCTTTCTGAATTACCCTGTCTCGTTTGGTTTTATTCCTTCATAATTGCATGCTGATGGAAGTTTCAAATTACTTTAGGATGTTGCTGTGAAGATACTCATGGAACAAGATTTTCATGCAGAGCGATTCAAGGAATTTTTGCGGGAGGTAACTCTCATTTCCCTATCTCCTCAACTATTGATAAGCAAACTGGATAAAAGAGAGAAAATGAGGATGGGTGAATGCCAGTTTTATTGTTTATTTTCCTTAGACCAATTGCACTAATCCGACCTTCCTTCCGTTTTGTTTAGGTTGCAATTATGAAGCGGTTGCGACACCCAAATATTGTGCTTTTTATGGGTGCAGTTACTCAGCGACCAAACTTGTCCATAGTTACAGAATATTTATCAAGGTTTTATCTTGGCAAACCCTACAGTAATCGGACTTTTGATTTTTCAGTCTAGCTAACAGTGCCCATGTTGCAATGTATTTCAGAGGTAGCTTATATAGACTTCTTCATAAACCTGGTGCTAGGGAGGTTTTGGATGAAAGGTGTCGGTTGTCTATGGCATATGATGTGGTATGAATACGTCCCCGCTCTGCCTCATTTTATTTTGAATCTGGGGCTCATCTCCTTATATCATATTGGTGCAGGCAAAGGGGATGAATTATCTACATAAACGCAATCCTCCCATCGTTCATAGAGATTTGAAATCTCCAAATCTTTTAGTGGACAAAAAATACACAGTGAAGGTGAGAATAATTTCCTTTTCAGCACATGTTAAAATTGCAATCCATCTTTTCTCTATTGATACAGTTCTTGACTTGCGCTATCAGAGTCGTTTAAAGGAGAGAAAAATGGAGAGGATGTCTTAGTGTCAAAAACTTGTATACTTATGCATAATTATTGGAGAACAAAAAAGGAAGTTTGGAGGGATAAAGCTTATGTCAGATTTCTCAGATAATGGAGAACTAACGGCGTGTAATGTTGTGGGGAGGATTAAATTGCAACAGACAGCATATATCTTGAAGATTGTACATTATACTTCTGGTTTTGTAGGCCCGTGCGAGTCAGAGGTTTCTTTTGTCATCCGAATGGACATTGACCATCTGGAATCGTGGTAATTCAATGTCCACGTGGCAAGGATGCTGGTATTTGTTTATCTAGCGCCATGTTGATGTACTGGACACCTATCATAACTTCTTTTTTATGTTCTGGATGCAGCATCTCAAGATATTAAAACTCTATGAGGGGGAAGGTTTTTAGTATATTTTAGTTTTACTATTTAGATTAGTGTGAGATACAGGAAACTTCTAGTCCTAGAAAAGCCCTTAATTTGCGTCAACAGACATTATATTGTGTCTACAATGCTTATGCTGACAATACAACGTAAGCTCTGCATCTGATCTGACTCTACTGCATTCTGGAACAAGTCTTAATGAAAGTTGTTTATGATAGATAATTGAGTTCTGTTATGGTGTTTCTCTATGCATATTTTGTGCTCTTATATTATTAAAACCTTCTCTTTATGCAAAGATGTTGAATGTCCCCGGCCTGTCTGATGTCTTCGTCAGGTCTGTGATTTTGGCCTTTCTCGTTTAAAAGCGAACACATTTCTCTCGTCAAAGTCTGCTGCTGGGACTGTAAGTGCCTGATTCAACATATGATTTGTTCAACTTCCGCTCGTCTTTTTCTCTTCACGTCATCGATGCATTTTTTTAACTGGTTCTTCTTGTGAATAGCCGGAATGGATGGCACCTGAAGTTCTTCGTGATGAACCATCAAATGAGAAATCTGATGTATACAGCTTTGGTGTTATTTTGTGGGAGCTGGCAACGTTGCAACAGCCTTGGAGTAATTTGAACCCAGCACAGGTTTGTATTTCTTATCTCTATGCTCTATTGTCCCGGGGGTGGGGGGTGGGGGGGAGAGGGGGAGCCCATTCTTATGTAAATGTAAAATCTGGAGAATGGGCTATGTCTGGAGCCATTCAATTTTGTGTCAGGAGTTGACTAAAGTCTTTGTTTCTGTTTATGTCTGGTAGACTCATACCAGGGGATGGAGAACAATCCGATTTGCTTCAGCAATTCTCTGAAGAGTCATTTATTCCTCATTTTATATACCTCTCTTCTCCATTTGGTTTAGGGAGAGAGCTAGTCATTCATTGGGCATTGAATGTCGATGTCAATGTTATAAAGATTCTTCATGCTTTGATTAGTATTCTCATATCAGCTTCTTTATAGCAAAGATCTTTCTCTGACGAAGATACAGTCAATTAAGAAATGTGGATAAAACGATATCAATCGCATGGAAGATATTTCTATAAGTTCCCTCTTTTGATTTCCGAATTTCTGATATTTCTCTTTGATTAAAAACCAGGGAGGGCACTCAATCTTGTCTTGGTATCTAGGTGGCAACACCTTTATGATACCTCTGATTGAAAACATTGATTTAATACTAGAAAGACAACTTGGATAATTTGCAACACTACTTGGCACTTGTATTGCATCTTGGCTATATTTTAAAACGGAACATATGCATTGTTATCTTTATTGGTATGCTCGTTGTTAAGAGATGAGATAAGAGGGGGTGTGATATCGATTCTTGTGAATTCTGTATTGGTTAAATGCATCTAAACCTGCAGGTTGTAGCAGCTGTGAGCTTTAAGGGGAAAAGACTCGACATTCCACGTGACTTGACTCCTCAAGTGGCAAGCATTATAGAGGCTTGCTGGGCCAAGTATGTTGCTATGTTCTTCCATAGTTCAGTCACATGGGTTTTGGTTTGCTTTGATGTGTACTTCAAGTTACTTTTGGTAATGTTGCAGAGAACCATGGAAACGTCCCTCCTTTGCTGCAATCATGGATATGCTGAGACCACTAATTAAACCTCCTGTAACACCTCCTCAACCAGGCCGTACAGACACGCAGTTGATTGCGTGAATGCGTGTAATAGATGTATGATTTCTGCACATATTTGGCATTCTTTGTTAATCATCTTCTGGGAGGAACAAATCTTTGTTTACTTCAGGTTCGTGTATCCTGAAGTCTCTCTCTTCCTTCTGCTTAAATTTTACATTTGTCTTGATGTACACATGTTACTCCAACTTAAGTCGAAGTTGGAAGTGTTGGTGATTGTTTCGACTTTCTGACTTCAACTTGGCAGATGTGAAGAGGGTTCACCTCTTAGCTTCCTATGCTGTTTCGTTTGATAGTATGTGAGCTTGTAACAACCTTTTTTTTTTATTTACAGGCTTTTGTTCCGTACATATTAGTTCAGAATGCCCGTCTAGAGCCATTTTTTTTCTTCACAAATTCAAGCAGCCATTTCTCCCAGAAGAGCATTTGCAATTGACTTGTACGTTTCCTCGTGGAAATAATGTCTAGCCATATGATTTTGTTAATGTAAGCAAATAACAGTTCTTCTATTTTCTATCAAGAAATGATTTTGTACGTACAAGAATTTATAATGGGAATGCACAGTTCGTATCAC</genome_strand>
        <mrna_strand>AAGCTTATAAACGAATCAAATTAATATACACATACTTTTCTGACATATTTATACATTTAAT---AT-TCCGATGTGCTTTTAAGTCAAGTGCTTACTGTTCTTATGAACTCAAATCAGTCAAAAGTCATAAGCTTATCATCTCTAAGTCGTAATTTTTCAGCTTATAAGCATTTTTGGATTGATCGGAAACGGAAGAAAGTGAGGCCAAATGGGTTGTAAGAGTAATACTTGAAATTATATAGGGAATCATTTGAAATATGATAAAAGTAGAGGGGAGTTTAATATAATTAAGTTAAACTTATAACTTAAAGTCGAAAATTCCAGGAATATTACGACTAAAACAAGACTTCCCCCATCTTTTTTTTCTCTCACTTCTCATTCGACAAGTACGAAGAAGAAGAAGAAAAGAGAGAAAACTTTTAGTGAGAGAAAGTCTTTGAGAGAGAGAGGGAGTTGAAGCTATAGTGTAATGAACAATTTCTAGCTAGGGTTTTGTTGAATTGATAAATTATTGAGATGGAAATGTCTACTAGACGATCGAATTATACTTTGTTGAGTCAAGTTGCAGATGACAATTACCTTCCTCCGCCACCGAAGTACTCCGTCACTGGCGGTGGCGGTGGAGGTGGAGGAGTAGCACCGTATTATGAGTCTCATTCTGGTGAAAAGGGTAAAGGCAAAACAGGTGATAATAGAGGATTTGATTGGGATTTGAGTGATCACCGTAGTAATATGATGCAAGCGTCGAATCGGATCGGTGCGGCGGCATTTCCAGGTTCGATTGGCTTGCAGAGGCAATCAAGTGGGAGCAGCTTTGGTGAAAGTTCGATCTCCGGGGAGTATTACATGCCGTCGTTGTCTAATGCGGAGGCGTCATTTGGATATCTCAATGATGGCGGTGGCGGTGCTGAAGTGAGGATGAAGCCGTTGGAAGCTAATTTGTTCGGTGGCTCGTCTTCTAAGAGCTGGGCGCAGCAGACTGAGGAGAGTTATCAGCTGCAGTTAGCTTTGGCTTTACGGCTTTCTTCCGAAGCTACCTGTGCTGATGATCCAAATTTTTTGGATCATGTGCCTGATGAATCCGCATCCCGTGCTTCAGCTTCAGCTGCTTCGGCGGAGACCCTTTCCCATCGATTCTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAATGGATGCTTGTCGTACTTTGACAAAGTGCCTGATGGATTTTACTTGATCCATGGGATGGATCCATATGTCTGGATTGTCTGCTCAGATCTACAAGAAAATGCCCGGGTTCCATCTATTGAATCAATGAGAGCTGTTGATCCCTCTGTAGTACCATCAGTTGAAGTGATTTTGATTGATCGGCGTACGGATCCAAGCTTGAAAGAACTGCAGAATCGGATCCATAGTCTCTCTCCTACTTGTGGCACAACAAAAGAAGTTGTTGATCAGCTTGCTCAGCTGGTCTGCAGTCATATGGG.......................................................................................GGGCGCAACTTCTGCCGGAGAAGATGAGTTGGTTCCTTTGTGGAAGGAGTGTAGTTATGAGCTGAAGGATTGTCTAGGATCCACTGTGCTTCCCATTGGTAGCCTGTCTGTTGGCCTTTGCAGGTATCGAGCTTTGCTATTTAAA.............................................................................................................................................................................................................................................................GTTCTAGCTGACGCCATTGGTTTACCATGTCGAATTGCCAAAGGATGTAAATATTGTAACAGAGCTGATGCTTCCTCATGTTTAGTTCGTTTTGGACCTGACAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTACCTGGTTGATTTGATTGGGAGCCCTGGATGCTTATGCGAACCAGATTCCTCGCTCAACGGCCCATCTTCTATCTCAATCTCTTCACCATTGCGATTTCCGAGATTCAGAGAAGTTGAACCGACAACTGATTTCAGGTCACTTGCCAAACAGTATTTCTCGGATTGTCAATCGCTTAATCTTGTGTTTGAGGAATCTTCAGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTGCTGTTGATGGAGACGCAGGACAAACTGACCGAAATAACATTGAGAGAAACAGTGCTGTCACTGGTCCAAGTAACCGTGATGAAGTTTCTCGGTTACCTGTGCCTGCAATTAG........................................................................................GGACATGGCTCCTGTGAAGTATGTCCGTCCAGTTTTGCATGGAGATACACAATTATCAGACCCAAGAGATATAGGGAATGATATGCGATTTCTTGAGAGAGGAAGTCAACTTGTTCCCTCTAAAATAAGTAGAGACATTGCCCTTGAAATAGAAGATTTTGATATACCCTGGGAAGATCTTGTTCTGAAGGAGAGGATTGGGGCAG............................................................................................................................................GGTCTTTTGGTACTGTTCACCGTGCTGATTGGAATGGTTCT.......................................................................................................................................................................................................................................................................................................GATGTTGCTGTGAAGATACTCATGGAACAAGATTTTCATGCAGAGCGATTCAAGGAATTTTTGCGGGAG...............................................................................................................................................GTTGCAATTATGAAGCGGTTGCGACACCCAAATATTGTGCTTTTTATGGGTGCAGTTACTCAGCGACCAAACTTGTCCATAGTTACAGAATATTTATCAAG...................................................................................AGGTAGCTTATATAGACTTCTTCATAAACCTGGTGCTAGGGAGGTTTTGGATGAAAGGCGTCGGTTGTCTATGGCATATGATGTG..........................................................................GCAAAGGGGATGAATTATCTACATAAACGCAATCCTCCCATCGTTCATAGAGATTTGAAATCTCCAAATCTTTTAGTGGACAAAAAATACACAGTGAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGTGATTTTGGCCTTTCTCGTTTAAAAGCGAACACATTTCTCTCGTCAAAGTCTGCTGCTGGGACT...................................................................................................CCGGAATGGATGGCACCTGAAGTTCTTCGTGATGAACCATCAAATGAGAAATCTGATGTATACAGCTTTGGTGTTATTTTGTGGGAGCTGGCAACGTTGCAACAGCCTTGGAGTAATTTGAACCCAGCACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTAGCAGCTGTGAGCTTTAAGGGGAAAAGACTCGACATTCCACGTGACTTGACTCCTCAAGTGGCAAGCATTATAGAGGCTTGCTGGGCCAA........................................................................................AGAACCATGGAAACGTCCCTCCTTTGCTGCAATCATGGATATGCTGAGACCACTAATTAAACCTCCTGTAACACCTCCTCAACCAGGCCGTACAGACACGCAGTTGATTGCGTGAATGCGTGTAATAGATGTATGATTTCTGCACATATTTGGCATTCTTTGTTAATCATCTTCTGGGAGGAACAAATCTTTGTTTACTTCAG..............................................................................................................................................................................................................................GCTTTTGTTCCGTACATATTAGTTCAGAATGCCCGTCTAGAGCCATTTTTTTTCTTCACAAATTCAAGCAGCCATTTCTCCCAGAAGAGCATTTGCAATTGACTTGTACGTTTCCTCGTGGAAATAATGTCTAGCCATATGATTTTGTTAATGTAAGCAAATAACAGTTCTTCTATTTTCTATCAAGAAATGATTTTGTACGTACAAGAATTTATAATGGGAATGCACAGTTCGTATCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U329428" ref_strand="-" ref_description="SGN-U329428        Tomato 200607 #1 [3 ESTs aligned]">
      <seq>tagatatttcctgctaacatatactcttttaagttgtgaaatacgcaggtttgcagcactgaaggcgagtatgggacttctttagagaatttcggacttgaatgagtgaatgacattgctcgctcaagctttttccagtcgattcttctgtaattgcttgcttggatcttgtaccctcgcctaggcaaagcaatgatgtacatcagaaacagctggcgaagtccttctcagggcttagctcaggtggcaaaggtcgagggaagttcaagccttgcatcatgcgaactaagcctgatatttaagtggacattgtgtttggttccaagggttgggccagactgatttcttggttatcaagaaaaagatcctgctcagctattcggttccccttagcttatttgtatatatctaaatgtgtaggatgttcatcaggggcaatctgattattgttgtgtcaatgtaataattgataggttatcctggcaaaccatttgagaagtatctgtactgtgatattgatagggggaagaaatggtcatcagaaaggtgattagacatgacaaacttatagcttaccatggatatgattcctaaataagaggatattggggttgatcattagggtagaacattagtaagtagtccaacattgtttagtttccttattattgttctcctagtttcgtattctgcaattttagtattatctgttgttcctttttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0100J12.1" temp_strand="-" temp_description="C09HBa0100J12.1  EU139070.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0100J12 upload_account_name:spain">
        <position start="71402" stop="68540"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71102" g_stop="70965" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="138" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70964" i_stop="69425" i_length="1540">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69424" g_stop="68841" g_length="584"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="722" r_length="584" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="723" polyA_stop="732"/>
      <MATCH_line gen_id="C09HBa0100J12.1" gen_strand="-" ref_id="SGN-U329428" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>722</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0100J12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U329428" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="71102" e_stop="70965"/>
          <exon e_start="69424" e_stop="68841"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGATATTTCCTGCTAACATATACTCTTTTAAGTTGTGAAATACGCAGGTTTGCAGCACTGAAGGCGAGTATGGGACTTCTTTAGAGAATTTCGGACTTGAATGAGTGAATGACATTGCTCGCTCAAGCTTTTTCCAGGTAAGGAGATCTTGTGGTGACTTATCATATGATTGCTTGATGAATTATTACTTTACCAGAATTCTTTGAGATGCAGCTGAATAACATGCACAGATGATGTTTTGGCATGATTTAATCTAAAAAACTAGCATGATTTAATCTAAAAAACTAGCTCATGAGGGGAGTATTCTCCAAGACAACAACCATTTCCTCAACCAACGTGGAGATAGTATAAGAGTCGGACCTATTTCAATTCTTGGTCTATCCGATGTTAGACCTCATTTGTACTGTTCATACTTCAAATGTCCCGGCATGGGCAATGCTGGGAGGGAAGGGGTGTTAAAAGTTACACTGGTAGTGAGATAGTTAACTAGTCTCCTTGTCTATGTTGCTTGGCCTCTCCAAAAATGTCGCCGCACTCGTGTCGGGATCCTCCAAAAAAGCACTATTTTTGGAGTATCCAAACCACACCCATAGACATCTTTGAAGAGTCTGAGCATCATAGCTCCTTGTATGGTCTTGGGCAATACTCGCCTCATGAGCTAGCTTTTGAAGGTTGAGTTAGGCCCGAGGTCCATTCTCTTATGGTATCAGACTCGAGCTTTGCTAAGCCAATTTGTACAATTGTCTTATTTCTATCTACTGTAATGCTCTGGGAGTTCTCTCAACTTGGTCATGGAGCCACTCTGAGCTTCTTCTCTCTCCCAATTCAGCTCATCGAGTCACAAAATTTTGATCTTTCCCCACTTTTTAGCCATTTGAGCCTACTCTCCTCATTTCCAGGCCCATTCTTCAGCCAGTTGATACTGATCTTTGTCTCTCTGTATCATGTCTACTCTTCGATGTGCTTAAAAAAAAGGATTTTGAATCCACGTGTAGACTCAAGATTTCAGTTACATGTGCAGGAGGGTGTTAGAGAACTTGTCTCTCATCGAGTTTGTAAAATTTTTCAAAAGGTTTTATAATGTATGGGGCCACTGCAGTCATTATCCTTAAGTTTCTGAATTGGATGATCTGGTTATTTGATTCTTATGTTAGTGCACTACTTTTTGTATTTTGACTCACCAAGCTCCGCTGGTGGCTGAAGTTTCTCTTTCTCAGATGAAACGAAAAACAAAGAAGGTGAATTAGTATAACTCCTTCAGGGCTTCCGCTTCCTCCCCATTTACCATAAATTTACTGAAGAACACTTTAGGAGACTCATACGGTCCTAGGTAGCTTATTATAGAAATATAAGAAAGACGAGGTGGAGGAACGGAAGACTCTAGCAGTGTTGGTAGAGTCAATAAATTTGTTTCCTTAAGATGCTACAGGGTACAAACCAGAGTTAATGTTATGACTAACGACGCCCACCCTTTTAGAGACACGTTAGAGGTAACATAATCAATCAATTTAAAAATTGTGAATTTGTCTGTATCGCGGGCTGATGTCAAACAATCTTTTCTGTGTCATGTTGAGTAGGTTGACCTTTTGAAAGTGTTCGATGCTTAAATAGCTTACACAAAACAGTATTCAAATTTTTGAACCCTTAAATTTGTGTTGAACTTCTCTTCCGGTGCAGTCGATTCTTCTGTAATTGCTTGCTTGGATCTTGTACCCTCGCCTAGGCAAAGCAATGATGTACATCAGAAACAGCTGGCGAAGTCCTTCTCAGGGCTTAGCTCAGGTGGCAAAGGTCGAGGGAAGTTCAAGCCTTGCATCATGCGAACTAAGCCTGATATTTAAGTGGACATTGTGTTTGGTTCCAAGGGTTGGGCCAGACTGATTTCTTGGTTATCAAGAAAAAGATCCTGCTCAGCTATTCGGTTCCCCTTAGCTTATTTGTATATATCTAAATGTGTAGGATGTTCATCAGGGGCAATCTGATTATTGTTGTGTCAATGTAATAATTGATAGGTTATCCTGGCAAACCATTTGAGAAGTATCTGTACTGTGATATTGATAGGGGGAAGAAATGGTCATCAGAAAGGTGATTAGACATGACAAACTTATAGCTTACCATGGATATGATTCCTAAATAAGAGGATATTGGGGTTGATCATTAGGGTAGAACATTAGTAAGTAGTCCAACATTGTTTAGTTTCCTTATTATTGTTCTCCTAGTTTCGTATTCTGCAATTTTAGTATTATCTGTTGTTCCTTTTT</genome_strand>
        <mrna_strand>TAGATATTTCCTGCTAACATATACTCTTTTAAGTTGTGAAATACGCAGGTTTGCAGCACTGAAGGCGAGTATGGGACTTCTTTAGAGAATTTCGGACTTGAATGAGTGAATGACATTGCTCGCTCAAGCTTTTTCCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGATTCTTCTGTAATTGCTTGCTTGGATCTTGTACCCTCGCCTAGGCAAAGCAATGATGTACATCAGAAACAGCTGGCGAAGTCCTTCTCAGGGCTTAGCTCAGGTGGCAAAGGTCGAGGGAAGTTCAAGCCTTGCATCATGCGAACTAAGCCTGATATTTAAGTGGACATTGTGTTTGGTTCCAAGGGTTGGGCCAGACTGATTTCTTGGTTATCAAGAAAAAGATCCTGCTCAGCTATTCGGTTCCCCTTAGCTTATTTGTATATATCTAAATGTGTAGGATGTTCATCAGGGGCAATCTGATTATTGTTGTGTCAATGTAATAATTGATAGGTTATCCTGGCAAACCATTTGAGAAGTATCTGTACTGTGATATTGATAGGGGGAAGAAATGGTCATCAGAAAGGTGATTAGACATGACAAACTTATAGCTTACCATGGATATGATTCCTAAATAAGAGGATATTGGGGTTGATCATTAGGGTAGAACATTAGTAAGTAGTCCAACATTGTTTAGTTTCCTTATTATTGTTCTCCTAGTTTCGTATTCTGCAATTTTAGTATTATCTGTTGTTCCTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U323271" ref_strand="+" ref_description="SGN-U323271        Tomato 200607 #1 [7 ESTs aligned] arabidopsis/peptide: | Symbol: None | heat shock transcription factor family protein, contains Pfam profile: PF00447 HSF-type DNA-binding domain | chr5:971912-973682 REVERSE | Aliases: F17C15.140, F17C15_140(evalue: 1e-18, score=90.9) genbank/nr: gi|8347238|gb|AAF74563.1| heat stress transcription factor A3 [Lycopersicon peruvianum](evalue: 2e-155, score=551)">
      <seq>ctatggatgagatagagaaactcaggaatgagaagagtttgatgatgcaggaagttgttgagttgcagcagcagcagcgtggaacagttcaacaaatggaatccgttaatgaaaagcttcaggctgcagaacaaagacagaagcagatggtttcattcttggccaaggtgcttcaaaatcccacattcttggctcgtgttcggcagatgaaggagcaaggagaaattactagtccaagaacaatgaggaaatttgttaaacatcagtcacatggtccggatggagtggggtcgtcttcaatggaagggcagatagtcaagttcaggtctgactttcaagaccttgcaggatgctttgacagcccagatttcaatacagttgtggatcaacaactcccagaaattggtttaggagcggaagccatgccttttgaaggtgttcctgttgctgatgaactgacagtggcacatgaacttcttaattgttcagatcaggaaatacgaggagcttcattctttaactccgaaggctctcaattcaaagggaagaatgtagctagtcctcaaatagaagttatgcccgagtactttgcctcttttccagaggagatggggaaggagaagaacgtttcaggattttccacaccagctattggaagtatggtgaaagatgaggaactttggggtatgggttttgaagccagtgctggcatgccaagcactggtgccgagttatgggatagtcgtagcagctatgttccagactttggtgttagctctggtttgtcagatttatgggatatagatcccttgcaggtagctggaagttctggggtcgataagtggccagctgatgggtctccttttggtcagtctggaagtcatgcaaaccagcccaagaatgatagtttctaggaaagagtacccttgggccttcagtgtgccattgggatactgccatcatttagttgatgggacataatattgaatgagtgattataaatattttagttgataattacttttgactggttcttttcttctattccctctccttggtctgctatttctccgctaattgtgctggactgtgaatatttgatggcataaattgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0100J12.1" temp_strand="-" temp_description="C09HBa0100J12.1  EU139070.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0100J12 upload_account_name:spain">
        <position start="72515" stop="70802"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72215" g_stop="71102" g_length="1114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1114" r_length="1114" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0100J12.1" gen_strand="-" ref_id="SGN-U323271" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1114</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0100J12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U323271" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72215" e_stop="71102"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATGGATGAGATAGAGAAACTCAGGAATGAGAAGAGTTTGATGATGCAGGAAGTTGTTGAGTTGCAGCAGCAGCAGCGTGGAACAGTTCAACAAATGGAATCCGTTAATGAAAAGCTTCAGGCTGCAGAACAAAGACAGAAGCAGATGGTTTCATTCTTGGCCAAGGTGCTTCAAAATCCCACATTCTTGGCTCGTGTTCGGCAGATGAAGGAGCAAGGAGAAATTACTAGTCCAAGAACAATGAGGAAATTTGTTAAACATCAGTCACATGGTCCGGATGGAGTGGGGTCGTCTTCAATGGAAGGGCAGATAGTCAAGTTCAGGTCTGACTTTCAAGACCTTGCAGGATGCTTTGACAGCCCAGATTTCAATACAGTTGTGGATCAACAACTCCCAGAAATTGGTTTAGGAGCGGAAGCCATGCCTTTTGAAGGTGTTCCTGTTGCTGATGAACTGACAGTGGCACATGAACTTCTTAATTGTTCAGATCGGGAAATACGAGGAGCTTCATTCTTTAACTCCGAAGGCTCTCAATTCAAAGGGAAGAATGTAGCTAGTCCTCAAATAGAAGTTATGCCCGAGTACTTTGCCTCTTTTCCAGAGGAGATGGGGAAGGAGAAGAACGTTTCAGGATTTTCCACACCAGCTATTGGAAGTATGGTGAAAGATGAGGAACTTTGGGGTATGGGTTTTGAAGCCAGTGCTGGCATGCCAAGCACTGGTGCCGAGTTATGGGATAGTCGTAGCAGCTATGTTCCAGACTTTGGTGTTAGCTCTGGTTTGTCAGATTTATGGGATATAGATCCCTTGCAGGTAGCTGGAAGTTCTGGGGTCGATAAGTGGCCAGCTGATGGGTCTCCTTTTGGTCAGTCTGGAAGTCATGCAAACCAGCCCAAGAATGATAGTTTCTAGGAAAGAGTACCCTTGGGCCTTCAGTGTGCCATTGGGATACTGCCATCATTTAGTTGATGGGACATAATATTGAATGAGTGATTATAAATATTTTAGTTGATAATTACTTTTGACTGGTTCTTTTCTTCTATTCCCTCTCCTTGGTCTGCTATTTCTCCGCTAATTGTGCTGGACTGTGAATATTTGATGGCATAAATTGT</genome_strand>
        <mrna_strand>CTATGGATGAGATAGAGAAACTCAGGAATGAGAAGAGTTTGATGATGCAGGAAGTTGTTGAGTTGCAGCAGCAGCAGCGTGGAACAGTTCAACAAATGGAATCCGTTAATGAAAAGCTTCAGGCTGCAGAACAAAGACAGAAGCAGATGGTTTCATTCTTGGCCAAGGTGCTTCAAAATCCCACATTCTTGGCTCGTGTTCGGCAGATGAAGGAGCAAGGAGAAATTACTAGTCCAAGAACAATGAGGAAATTTGTTAAACATCAGTCACATGGTCCGGATGGAGTGGGGTCGTCTTCAATGGAAGGGCAGATAGTCAAGTTCAGGTCTGACTTTCAAGACCTTGCAGGATGCTTTGACAGCCCAGATTTCAATACAGTTGTGGATCAACAACTCCCAGAAATTGGTTTAGGAGCGGAAGCCATGCCTTTTGAAGGTGTTCCTGTTGCTGATGAACTGACAGTGGCACATGAACTTCTTAATTGTTCAGATCAGGAAATACGAGGAGCTTCATTCTTTAACTCCGAAGGCTCTCAATTCAAAGGGAAGAATGTAGCTAGTCCTCAAATAGAAGTTATGCCCGAGTACTTTGCCTCTTTTCCAGAGGAGATGGGGAAGGAGAAGAACGTTTCAGGATTTTCCACACCAGCTATTGGAAGTATGGTGAAAGATGAGGAACTTTGGGGTATGGGTTTTGAAGCCAGTGCTGGCATGCCAAGCACTGGTGCCGAGTTATGGGATAGTCGTAGCAGCTATGTTCCAGACTTTGGTGTTAGCTCTGGTTTGTCAGATTTATGGGATATAGATCCCTTGCAGGTAGCTGGAAGTTCTGGGGTCGATAAGTGGCCAGCTGATGGGTCTCCTTTTGGTCAGTCTGGAAGTCATGCAAACCAGCCCAAGAATGATAGTTTCTAGGAAAGAGTACCCTTGGGCCTTCAGTGTGCCATTGGGATACTGCCATCATTTAGTTGATGGGACATAATATTGAATGAGTGATTATAAATATTTTAGTTGATAATTACTTTTGACTGGTTCTTTTCTTCTATTCCCTCTCCTTGGTCTGCTATTTCTCCGCTAATTGTGCTGGACTGTGAATATTTGATGGCATAAATTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U320833" ref_strand="+" ref_description="SGN-U320833        Tomato 200607 #1 [10 ESTs aligned] arabidopsis/peptide: | Symbol: None | heat shock transcription factor family protein, contains Pfam profile: PF00447 HSF-type DNA-binding domain | chr5:971912-973682 REVERSE | Aliases: F17C15.140, F17C15_140(evalue: 2e-28, score=123) genbank/nr: gi|8347238|gb|AAF74563.1| heat stress transcription factor A3 [Lycopersicon peruvianum](evalue: 2e-68, score=263)">
      <seq>aagaatcttaaaaattaaaaaaaaattaaaaatggagcttcaggagaaaaactccaccgactttacagagttgtttacaggagatatttcttggtttgtatgtcggcgttacctatataaacctcccttcaaccccttttaccgactttttatctatcacccttatcgaaattttgaatcttttgatcacaaaaactattaaagtttcaatctttgatccataaaaaccacaaatctctttgtatgatatgaacccatttgataaaaaacaagaatctgatactgatacaaaaaccccatttttgactgaaatggactctgaatttgctgcgttttcaccaatttcactcccttttgctgacccatcttctccttttatcaattttggatcttttgccactcctttgagccaacatccagttggagaaggggaaggagaaggagaagggggagaaattgaacagccagctgagggaggattgggtgtgccgcagcctatggagtgtttacatgggatacaaattccgccatttttgtcaaagacttttgatttggttgaggaccctttattggatacgattatttcttggggtagaaatggagaaagctttgtagtttgggatccagtggagttttcaagattggttcttcctaggaatttcaagcacagtaatttctccagctttgttcgacagcttaatacatatgtgggtattaattttagcacactggccaactttttctggctaatgtgttaaatctctagttctctaactctgtctctctttttaatgatattttttccttgtatgtaatttctgttgtagtttttcatgtatctttattttttccctcatttttctgtagtttgtttgctcttttgttgttgatatactgtaaagataatgtcttaggatgtaaatgtaaatagatttttcgcgttgtaaacagtataggctcctgcgattgtaaatgagagttggagaactgttttttcttcttgatagttcaatgtttttggcatcttgtgtaaatgatgtcattgagatctttagtggatagtaaaatggtgggttcttaaggaaaatggtaaagaggtgcgctgttcatgatgtgggcttgtagataaagctccctgcattgatgcatctgctgagtttgggaggttcatctattgctgcaggtagaattcaaaggttctgattaaacagagtgtttaagctttgtagtttatatatggtctaacttcaaagatctactaattgtgtatttctagtgtaatgcagctcctggaactcatgaaaatttgancagtagcatcttgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0100J12.1" temp_strand="-" temp_description="C09HBa0100J12.1  EU139070.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0100J12 upload_account_name:spain">
        <position start="74087" stop="72170"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73795" g_stop="72470" g_length="1326"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1326" r_length="1326" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0100J12.1" gen_strand="-" ref_id="SGN-U320833" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>1326</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0100J12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U320833" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73795" e_stop="72470"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAATCCAAAAAAAAAATAAAAAATT-AAAATGGAGCTTCAGGAGAAAAACTCCACCGACTTTACAGAGTTGTTTACAGGAGATATTTCTTGGTTTGTATGTCGGCGTTACCTATATAAACCTCCCTTCAACCCCTTTTACCGACTTTTTATCTATCACCCTTATCGAAATTTTGAATCTTTTGATCACAAAAACTATTAAAGTTTCAATCTTTGATCCATAAAAACCACAAATCTCTTTGTATGATATGAACCCATTTGATAAAAAACAAGAATCTGATACTGATACAAAAACCCCATTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTTTTGCCACTCCTTTGAGCCAACATCCAGTTGGAGAAGGGGAAGGAGAAGGAGAAGGGGGAGAAATTGAACAGCCAGCTGAGGGAGGATTGGGTGTGCCGCAGCCTATGGAGTGTTTACATGGGATACAAATTCCGCCATTTTTGTCAAAGACTTTTGATTTGGTTGAGGACCCTTTATTGGATACGATTATTTCTTGGGGTAGAAATGGAGAAAGCTTTGTAGTTTGGGATCCAGTGGAGTTTTCAAGATTGGTTCTTCCTAGGAATTTCAAGCACAGTAATTTCTCCAGCTTTGTTCGACAGCTTAATACATATGTGGGTATTAATTTTAGCACACTGGCCAACTTTTTCTGGCTAATGTGTTAAATCTCTAGTTCTCTAACTCTGTCTCTCTTTTTAATGATATTTTTTCCTTGTATGTAATTTCTGTTGTAGTTTTTCATGTATCTTTATTTTTTCCCTCATTTTTCTGTAGTTTGTTTGCTCTTTTGTTGTTGATATACTGTAAAGATAATGTCTTAGGATGTAAATGTAAATAGATTTTTCGCGTTGTAAACAGTATAGGCTCCTGCGATTGTAAATGAGAGTTGGAGAACTGTTTTTTCTTCTTGATAGTTCAATGTTTTTGGCATCTTGTGTAAATGATGTCATTGAGATCTTTAGTGGATAGTAAAATGGTGGGTTCTTAAGTAAAATGGTAAAGAGGTGCGCTGTTCGTGATGTGGGCTTGTAGATAAAGCTCCCTGCATTGATGCATCTGCTGAGTTTGGGAGGTTCATCTATTGCTGCAGGTAGAATTCAAAGGTTCTGATTAAACAGAGTGTTTAAGCTTTGTAGTTTATATATGGTCTAACTTCAAAAGATCTACTAATTGTGTATTTCTAGTGTAATGCAGCTCCTGGAACTCATGAAAATTTGACAGTTAGCATCTTGCT</genome_strand>
        <mrna_strand>AAGAATCTTAAAAATTAAAAAAAAATTAAAAATGGAGCTTCAGGAGAAAAACTCCACCGACTTTACAGAGTTGTTTACAGGAGATATTTCTTGGTTTGTATGTCGGCGTTACCTATATAAACCTCCCTTCAACCCCTTTTACCGACTTTTTATCTATCACCCTTATCGAAATTTTGAATCTTTTGATCACAAAAACTATTAAAGTTTCAATCTTTGATCCATAAAAACCACAAATCTCTTTGTATGATATGAACCCATTTGATAAAAAACAAGAATCTGATACTGATACAAAAACCCCATTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTTTTGCCACTCCTTTGAGCCAACATCCAGTTGGAGAAGGGGAAGGAGAAGGAGAAGGGGGAGAAATTGAACAGCCAGCTGAGGGAGGATTGGGTGTGCCGCAGCCTATGGAGTGTTTACATGGGATACAAATTCCGCCATTTTTGTCAAAGACTTTTGATTTGGTTGAGGACCCTTTATTGGATACGATTATTTCTTGGGGTAGAAATGGAGAAAGCTTTGTAGTTTGGGATCCAGTGGAGTTTTCAAGATTGGTTCTTCCTAGGAATTTCAAGCACAGTAATTTCTCCAGCTTTGTTCGACAGCTTAATACATATGTGGGTATTAATTTTAGCACACTGGCCAACTTTTTCTGGCTAATGTGTTAAATCTCTAGTTCTCTAACTCTGTCTCTCTTTTTAATGATATTTTTTCCTTGTATGTAATTTCTGTTGTAGTTTTTCATGTATCTTTATTTTTTCCCTCATTTTTCTGTAGTTTGTTTGCTCTTTTGTTGTTGATATACTGTAAAGATAATGTCTTAGGATGTAAATGTAAATAGATTTTTCGCGTTGTAAACAGTATAGGCTCCTGCGATTGTAAATGAGAGTTGGAGAACTGTTTTTTCTTCTTGATAGTTCAATGTTTTTGGCATCTTGTGTAAATGATGTCATTGAGATCTTTAGTGGATAGTAAAATGGTGGGTTCTTAAGGAAAATGGTAAAGAGGTGCGCTGTTCATGATGTGGGCTTGTAGATAAAGCTCCCTGCATTGATGCATCTGCTGAGTTTGGGAGGTTCATCTATTGCTGCAGGTAGAATTCAAAGGTTCTGATTAAACAGAGTGTTTAAGCTTTGTAGTTTATATATGGTCTAACTTC-AAAGATCTACTAATTGTGTATTTCTAGTGTAATGCAGCTCCTGGAACTCATGAAAATTTGANCAGTAGCATCTTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U342549" ref_strand="+" ref_description="SGN-U342549        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr2:15314035-15314869 REVERSE | Aliases: None(evalue: 5e-28, score=122) genbank/nr: gi|18404148|ref|NP_565849.1| expressed protein [Arabidopsis thaliana] gi|15450488|gb|AAK96537.1| At2g36480/F1O11.11 [Arabidopsis thaliana] gi|16974461|gb|AAL31234.1| At2g36480/F1O11.11 [Arabidopsis thaliana] gi|20197924|gb|AAM15315.1| Expressed protein [Arabidopsis thaliana](evalue: 4e-26, score=122)">
      <seq>gggcgattggcggcaaatcggccgaattgatatatataggagctacacttttacccaaatcaatcaaaaaccctatctcctattccaatttacagctgaaaatccccaattgaagctcacaatttcagttctgtatatatataacgatcagatttagtctctttgattcgagttgttcttgaaatttacatgaaattagtaataagcagtgattttgttgtttgttttgattttgcgttttttttaatagcaattttggatgtaaccgatgtaaaatagtttgaatttagggttagttttttcttttattatttgatgattgtttggataaagtgatggaaatggagggttctcgtagaccatttgatagatcaagattggagccaggacctaagaaaccaagattagtcgaagccccaattggaactgagcgaggttctaatgggagaagctttattcctcaacggggagctgggaattcgaggattcgagctagtgataaagggggagactcggaaaacagtgattcgattcgcgggtcttttcaacagcagacgcagcatcaggagctagtgagtcaatataagacggctttagctgaactaacatttaattcaaagccgataattacaaacttgactattattgctggtgagaatttgcaagcggccaaggcaattgctgctactatctgcaacaacattattgaggtgatattccggttttaaatgctactgtgtcaatgttgttgattttgtttaatttagtgtgttttattacttggttgtacagaagtgaaatctgataaagaaggcaaagttagatttatgatattttagattagtgcagctggtgtaatgagtgttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0100J12.1" temp_strand="+" temp_description="C09HBa0100J12.1  EU139070.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0100J12 upload_account_name:spain">
        <position start="79703" stop="81141"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80003" g_stop="80841" g_length="839"/>
          <reference_exon_boundary r_type="cDNA" r_start="30" r_stop="868" r_length="839" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0100J12.1" gen_strand="+" ref_id="SGN-U342549" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>839</cumulative_length_of_scored_exons>
        <coverage percentage="0.967" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0100J12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U342549" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80003" e_stop="80841"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATATATAGGAGCTACACTTTTACCCAAATCAATCAAAAACCCTATCTCCTATTCCAATTTACAGCTGAAAATCCCCAATTGAAGCTCACAATTTCAGTTCTGTATATATATAACGATCAGATTTAGTCTCTTTGATTCGAGTTGTTCTTGAAATTTACATGAAATTAGTAATAAGCAGTGATTTTGTTGTTTGTTTTGATTTTGCGTTTTTTTTAATAGCAATTTTGGATGTAACCGATGTAAAATAGTTTGAATTTAGGGTTAGTTTTTTCTTTTATTATTTGATGATTGTTTGGATAAAGTGATGGAAATGGAGGGTTCTCGTAGACCATTTGATAGATCAAGATTGGAGCCAGGACCTAAGAAACCAAGATTAGTCGAAGCCCCAATTGGAACTGAGCGAGGTTCTAATGGGAGAAGCTTTATTCCTCAACGGGGAGCTGGGAATTCGAGGATTCGAGCTAGTGATAAAGGGGGAGACTCGGAAAACAGTGATTCGATTCGCGGGTCTTTTCAACAGCAGACGCAGCATCAGGAGCTAGTGAGTCAATATAAGACGGCTTTAGCTGAACTAACATTTAATTCAAAGCCGATAATTACAAACTTGACTATTATTGCTGGTGAGAATTTGCAAGCGGCCAAGGCAATTGCTGCTACTATCTGCAACAACATTATTGAGGTGATATTCCGGTTTTAAATGCTACTGTGTCAATGTTGTTGATTTTGTTTAATTTAGTGTGTTTTATTACTTGGTTGTACAGAAGTGAAATCTGATAAAGAAGGCAAAGTTAGATTTATGATATTTTAGATTAGTGCAGCTGGTGTAATGAGTGTTGT</genome_strand>
        <mrna_strand>ATATATATAGGAGCTACACTTTTACCCAAATCAATCAAAAACCCTATCTCCTATTCCAATTTACAGCTGAAAATCCCCAATTGAAGCTCACAATTTCAGTTCTGTATATATATAACGATCAGATTTAGTCTCTTTGATTCGAGTTGTTCTTGAAATTTACATGAAATTAGTAATAAGCAGTGATTTTGTTGTTTGTTTTGATTTTGCGTTTTTTTTAATAGCAATTTTGGATGTAACCGATGTAAAATAGTTTGAATTTAGGGTTAGTTTTTTCTTTTATTATTTGATGATTGTTTGGATAAAGTGATGGAAATGGAGGGTTCTCGTAGACCATTTGATAGATCAAGATTGGAGCCAGGACCTAAGAAACCAAGATTAGTCGAAGCCCCAATTGGAACTGAGCGAGGTTCTAATGGGAGAAGCTTTATTCCTCAACGGGGAGCTGGGAATTCGAGGATTCGAGCTAGTGATAAAGGGGGAGACTCGGAAAACAGTGATTCGATTCGCGGGTCTTTTCAACAGCAGACGCAGCATCAGGAGCTAGTGAGTCAATATAAGACGGCTTTAGCTGAACTAACATTTAATTCAAAGCCGATAATTACAAACTTGACTATTATTGCTGGTGAGAATTTGCAAGCGGCCAAGGCAATTGCTGCTACTATCTGCAACAACATTATTGAGGTGATATTCCGGTTTTAAATGCTACTGTGTCAATGTTGTTGATTTTGTTTAATTTAGTGTGTTTTATTACTTGGTTGTACAGAAGTGAAATCTGATAAAGAAGGCAAAGTTAGATTTATGATATTTTAGATTAGTGCAGCTGGTGTAATGAGTGTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U327925" ref_strand="+" ref_description="SGN-U327925        Tomato 200607 #1 [3 ESTs aligned]">
      <seq>gcacgagggaacgcaaaatattgggccgatgaatgcaactctggaatccaggggatccatagtgcaacagggagagactctcagagctgcctctccctctgctcagtcaccaatgcatcaccttcctccatccccatcacttataacaagcaacagtaatcaagtaattaacagtcccgctgagcagtaccagatgcaaaccagttctcgttctgatccaagactatcccaaatctcaaggaggtcaaatctagatcctcgtaaccagtatgcccaggaatctctgacaatgccatctcggaataccatttcagttaattcacaaagacaacaccctccaagtttgcagaattcgtctgccttgtcttcttctcatcagttgagacagaaggttcagcgggaaagcctggaatctgaatattctgtacaaaccaagaattcaacagttcctgagatttcaggttttcctgatccctctagcactagcagtttgttggctgctgttttgaagagtggagtcattggtaataaatcgagttctggtactacgtcaagttctcttgataagggtgctctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0100J12.1" temp_strand="+" temp_description="C09HBa0100J12.1  EU139070.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0100J12 upload_account_name:spain">
        <position start="85179" stop="86354"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85478" g_stop="86054" g_length="577"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="577" r_length="577" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0100J12.1" gen_strand="+" ref_id="SGN-U327925" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>577</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0100J12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U327925" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85478" e_stop="86054"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATGTTGGAACGCAAAATATTGGGCCGATGAATGCAACTCTGGAATCCAGGGGATCCATAGTGCAACAGGGAGAGACTCTCAGAGCTGCCTCTCCCTCTGCTCAGTCACCAATGCATCACCTTCCTCCATCCCCATCACTTATAACAAGCAACAGTAATCAAGTAATTAACAGTCCCGCTGAGCAGTACCAGATGCAAACCAGTTCTCGTTCTGATCCAAGACTATCCCAAATCTCAAGGAGGTCAAATCTAGATCCTCGTAACCAGTATGCCCAGGAATCTCTGACAATGCCATCTCGGAATACCATTTCAGTTAATTCACAAAGACAACACCCTCCAAGTTTGCAGAATTCGTCTGCCTTGTCTTCTTCTCATCAGTTGAGACAGAAGGTTCAGCGGGAAAGCCTGGAATCTGAATATTCTGTACAAACCAAGAATTCAACAGTTCCTGAGATTTCAGGTTTTCCTGATCCCTCTAGCACTAGCAGTTTGTTGGCTGCTGTTTTGAAGAGTGGAGTCATTGGTAATAAATCGAGTTCTGGTACTACGTCAAGTTCTCTTGATAAGGGTGCTCTC</genome_strand>
        <mrna_strand>GCACGAGGGAACGCAAAATATTGGGCCGATGAATGCAACTCTGGAATCCAGGGGATCCATAGTGCAACAGGGAGAGACTCTCAGAGCTGCCTCTCCCTCTGCTCAGTCACCAATGCATCACCTTCCTCCATCCCCATCACTTATAACAAGCAACAGTAATCAAGTAATTAACAGTCCCGCTGAGCAGTACCAGATGCAAACCAGTTCTCGTTCTGATCCAAGACTATCCCAAATCTCAAGGAGGTCAAATCTAGATCCTCGTAACCAGTATGCCCAGGAATCTCTGACAATGCCATCTCGGAATACCATTTCAGTTAATTCACAAAGACAACACCCTCCAAGTTTGCAGAATTCGTCTGCCTTGTCTTCTTCTCATCAGTTGAGACAGAAGGTTCAGCGGGAAAGCCTGGAATCTGAATATTCTGTACAAACCAAGAATTCAACAGTTCCTGAGATTTCAGGTTTTCCTGATCCCTCTAGCACTAGCAGTTTGTTGGCTGCTGTTTTGAAGAGTGGAGTCATTGGTAATAAATCGAGTTCTGGTACTACGTCAAGTTCTCTTGATAAGGGTGCTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U341234" ref_strand="+" ref_description="SGN-U341234        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>tctgtcactagtctatcaatggacagaaatgcttcgaactctccaaattattcccagagaaatgtagaacagccaccattgccacctggtctgcctccaactcttgcaggtactgcatcatcgcagacgccgaatgcaccaaatattgcttccagtcctctttcaagtattttgagtacattggtggcgaaggggttaatatccgcatcaaagaaggaccctcctatttatactccttcagatacacctcctcaaactcagaaccttattccacctgcaagttccatttcaactcctgctttatctgctccaacatcttcatctgttccttcttcagctcataaggatgaactttcacac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0100J12.1" temp_strand="+" temp_description="C09HBa0100J12.1  EU139070.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0100J12 upload_account_name:spain">
        <position start="85824" stop="86783"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86124" g_stop="86483" g_length="360"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="360" r_length="360" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0100J12.1" gen_strand="+" ref_id="SGN-U341234" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>360</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0100J12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U341234" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86124" e_stop="86483"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGTCACTAGTCTATCAATGGACAGAAATGCTTCGAACTCTCCAAATTATTCCCAGAGAAATGTAGAACAGCCACCATTGCCACCTGGTCTGCCTCCAACTCTTGCAGGTACTGCATCATCGCAGACGCCGAATGCACCAAATATTGCTTCCAGTCCTCTTTCAAGTATTTTGAGTACATTGGTGGCGAAGGGGTTAATATCCGCATCAAAGAAGGACCCTCCTATTTATACTCCTTCAGATACACCTCCTCAAACTCAGAACCTTATTCCACCTGCAAGTTCCATTTCAACTCCTGCTTTATCTGCTCCAACATCTTCATCTGTTCCTTCTTCAGCTCATAAGGATGAACTTTCACAC</genome_strand>
        <mrna_strand>TCTGTCACTAGTCTATCAATGGACAGAAATGCTTCGAACTCTCCAAATTATTCCCAGAGAAATGTAGAACAGCCACCATTGCCACCTGGTCTGCCTCCAACTCTTGCAGGTACTGCATCATCGCAGACGCCGAATGCACCAAATATTGCTTCCAGTCCTCTTTCAAGTATTTTGAGTACATTGGTGGCGAAGGGGTTAATATCCGCATCAAAGAAGGACCCTCCTATTTATACTCCTTCAGATACACCTCCTCAAACTCAGAACCTTATTCCACCTGCAAGTTCCATTTCAACTCCTGCTTTATCTGCTCCAACATCTTCATCTGTTCCTTCTTCAGCTCATAAGGATGAACTTTCACAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U327771" ref_strand="+" ref_description="SGN-U327771        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | pre-mRNA cleavage complex-related, contains weak similarity to Pre-mRNA cleavage complex II protein Pcf11 (Fragment) (Swiss-Prot:O94913) (Homo sapiens) | chr4:2471970-2475979 FORWARD | Aliases: None(evalue: 5e-18, score=87) genbank/nr: gi|4115937|gb|AAD03447.1| contains similarity to human PCF11p homolog (GB:AF046935) [Arabidopsis thaliana](evalue: 3e-16, score=87)">
      <seq>ctgttgaataattcaagaaagtggtatttaaattctggggaatggattgctgcatttggtggcctcccttgtggcgataaatctgaagggccagctggaggttctagtgagacatcagaatgtactgagaccatggttcctgcagatgaatgtcaatgtgtgtgtgttttgtgtggtgagttttttgaagacttctacaatgaagaaagtgatgaatggatgttcaaagatgctgtttacatgagtattccaagtgaaagtgattgtcagggtccgatagtccacaagaactgtatttcagaaagttcttgtcaagagttggggtttgcctaggatataaaactggtgttggatgcttgatttttgtctcttaatcgaagacaaccaggttcattttgaattacttgtaatgattatacatcttcttgcttagtaagcctcttccatgcttttgtttgaaacgacaatgaaatggaaattctagatactagaacagtttgcgcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0100J12.1" temp_strand="+" temp_description="C09HBa0100J12.1  EU139070.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0100J12 upload_account_name:spain">
        <position start="86421" stop="88169"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86721" g_stop="87065" g_length="345"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="345" r_length="345" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="87066" i_stop="87705" i_length="640">
            <donor d_prob="0.923" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="87706" g_stop="87855" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="346" r_stop="495" r_length="150" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="504" polyA_stop="520"/>
      <MATCH_line gen_id="C09HBa0100J12.1" gen_strand="+" ref_id="SGN-U327771" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>495</cumulative_length_of_scored_exons>
        <coverage percentage="0.952" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0100J12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U327771" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86721" e_stop="87065"/>
          <exon e_start="87706" e_stop="87855"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTTGAATAATTCAAGAAAGTGGTATTTAAATTCTGGGGAATGGATTGCTGCATTTGGTGGCCTCCCTTGTGGCGATAAATCTGAAGGGCCAGCTGGAGGTTCTAGTGAGACATCAGAATGTACTGAGACCATGGTTCCTGCAGATGAATGTCAATGTGTGTGTGTTTTGTGTGGTGAGTTTTTTGAAGACTTCTACAATGAAGAAAGTGATGAATGGATGTTCAAAGATGCTGTTTACATGAGTATTCCAAGTGAAAGTGATTGTCAGGGTCCGATAGTCCACAAGAACTGTATTTCAGAAAGTTCTTGTCAAGAGTTGGGGTTTGCCTAGGATATAAAACTGGTAAGTGATATGATGTTAAAGTTGATTTTAGATATTTTAAATACTTCACTAGATACTAATAATTATGAAAGAAGCCTTTTCATGTGGTTTGCTGGTAAATGGGTGGGATCTGTTTTTCATAGATAAGAATCTGCCATCGATTCTTAATGGAAAAACAAATATGTGGTACTTTTCATTGAAATTTTTCCCCAAATAAACTGAACACAAGTTACTTGTCGGCACCTTGAGTAAATTATGGATCTAATTGTCTGACAGCCCCATTTTGGAGTGCGTTGCTCTTAAGAATTAAATGCTTTTCAGAAGAGAGCACTTCCTAAAGTTCTTAAATTCTCGAAGTGCTTTGAATTCAAATTGGTTTTGTGCTGGCAATAAAATGGTTAGACAAGTTATGCTGCCCGTCAGAATTGTTAGTTGAAACTTTTGGACTGGCAATAAAATGGAGGAAGCTTAACTTTTGAAATACAATTTATGGATGCATTATTCTTTTTGATCTTCTTTTGGACTTGTGTACGTGCTTTTAATCTTGCCATCCTTCGTAGTTTGTAATTTGGTATTTATTCGTTCCTTGCAGTTCCTTTATTTCATTAGTAGCCACTGCTGACTTGTATTGTATCATATTGTCCATGGTTTCATTTCTCAGGTGTTGGATGCTTGATTTTTGTCTCTTAATCGAAGACAACCAGGTTCATTTTGAATTACTTGTAATGATTATACATCTTCTTGCTTAGTAAGCCTCTTCCATGCTTTTGTTTGAAACGACAATGAAATGGAAATTCTAGATACTAGAACA</genome_strand>
        <mrna_strand>CTGTTGAATAATTCAAGAAAGTGGTATTTAAATTCTGGGGAATGGATTGCTGCATTTGGTGGCCTCCCTTGTGGCGATAAATCTGAAGGGCCAGCTGGAGGTTCTAGTGAGACATCAGAATGTACTGAGACCATGGTTCCTGCAGATGAATGTCAATGTGTGTGTGTTTTGTGTGGTGAGTTTTTTGAAGACTTCTACAATGAAGAAAGTGATGAATGGATGTTCAAAGATGCTGTTTACATGAGTATTCCAAGTGAAAGTGATTGTCAGGGTCCGATAGTCCACAAGAACTGTATTTCAGAAAGTTCTTGTCAAGAGTTGGGGTTTGCCTAGGATATAAAACTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTGGATGCTTGATTTTTGTCTCTTAATCGAAGACAACCAGGTTCATTTTGAATTACTTGTAATGATTATACATCTTCTTGCTTAGTAAGCCTCTTCCATGCTTTTGTTTGAAACGACAATGAAATGGAAATTCTAGATACTAGAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U339235" ref_strand="-" ref_description="SGN-U339235        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | zinc finger (C2H2-type) family protein, weak similarity to S-locus protein 4 (GI:6069478) (Brassica rapa); weak similarity to Pre-mRNA cleavage complex II protein Pcf11 (Fragment) (Swiss-Prot:O94913) (Homo sapiens); contains Prosite PS00028: Zinc finger, C2H2 type, domain | chr2:15309883-15313353 REVERSE | Aliases: F1O11.23(evalue: 5e-14, score=75.9) genbank/nr: hypothetical(evalue: 4e-12, score=75.9)">
      <seq>gaagacttctacaatgaagaaagtgatgaatggatgttcaaagatgctgtttacatgagtattccaagtgaaagtgattgtcagggtccgatagtccacaagaactgtatttcagaaagttcttgtcaagagttggggtttgcctaggatataaaactggtgttggatgcttgatttttgtctcttaatcgaagacaaccaggttcattttgaattacttgtaatgattatacatcttcttgcttagtaagcctcttccatgcttttgtttgaatcagcaatgaaatggaaattcagattcttcgcacagtttgcgcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0100J12.1" temp_strand="+" temp_description="C09HBa0100J12.1  EU139070.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0100J12 upload_account_name:spain">
        <position start="86607" stop="88149"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86907" g_stop="87065" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="159" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="87066" i_stop="87705" i_length="640">
            <donor d_prob="0.923" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="87706" g_stop="87855" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="160" r_stop="309" r_length="150" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="318" polyA_stop="334"/>
      <MATCH_line gen_id="C09HBa0100J12.1" gen_strand="+" ref_id="SGN-U339235" ref_strand="-">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>309</cumulative_length_of_scored_exons>
        <coverage percentage="0.925" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0100J12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U339235" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="86907" e_stop="87065"/>
          <exon e_start="87706" e_stop="87855"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGACTTCTACAATGAAGAAAGTGATGAATGGATGTTCAAAGATGCTGTTTACATGAGTATTCCAAGTGAAAGTGATTGTCAGGGTCCGATAGTCCACAAGAACTGTATTTCAGAAAGTTCTTGTCAAGAGTTGGGGTTTGCCTAGGATATAAAACTGGTAAGTGATATGATGTTAAAGTTGATTTTAGATATTTTAAATACTTCACTAGATACTAATAATTATGAAAGAAGCCTTTTCATGTGGTTTGCTGGTAAATGGGTGGGATCTGTTTTTCATAGATAAGAATCTGCCATCGATTCTTAATGGAAAAACAAATATGTGGTACTTTTCATTGAAATTTTTCCCCAAATAAACTGAACACAAGTTACTTGTCGGCACCTTGAGTAAATTATGGATCTAATTGTCTGACAGCCCCATTTTGGAGTGCGTTGCTCTTAAGAATTAAATGCTTTTCAGAAGAGAGCACTTCCTAAAGTTCTTAAATTCTCGAAGTGCTTTGAATTCAAATTGGTTTTGTGCTGGCAATAAAATGGTTAGACAAGTTATGCTGCCCGTCAGAATTGTTAGTTGAAACTTTTGGACTGGCAATAAAATGGAGGAAGCTTAACTTTTGAAATACAATTTATGGATGCATTATTCTTTTTGATCTTCTTTTGGACTTGTGTACGTGCTTTTAATCTTGCCATCCTTCGTAGTTTGTAATTTGGTATTTATTCGTTCCTTGCAGTTCCTTTATTTCATTAGTAGCCACTGCTGACTTGTATTGTATCATATTGTCCATGGTTTCATTTCTCAGGTGTTGGATGCTTGATTTTTGTCTCTTAATCGAAGACAACCAGGTTCATTTTGAATTACTTGTAATGATTATACATCTTCTTGCTTAGTAAGCCTCTTCCATGCTTTTGTTTGAAACGACAATGAAATGGAAATTCTAGATAC-TAGAACA</genome_strand>
        <mrna_strand>GAAGACTTCTACAATGAAGAAAGTGATGAATGGATGTTCAAAGATGCTGTTTACATGAGTATTCCAAGTGAAAGTGATTGTCAGGGTCCGATAGTCCACAAGAACTGTATTTCAGAAAGTTCTTGTCAAGAGTTGGGGTTTGCCTAGGATATAAAACTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTGGATGCTTGATTTTTGTCTCTTAATCGAAGACAACCAGGTTCATTTTGAATTACTTGTAATGATTATACATCTTCTTGCTTAGTAAGCCTCTTCCATGCTTTTGTTTGAATCAGCAATGAAATGGAAATTC-AGATTCTTCGCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U340401" ref_strand="-" ref_description="SGN-U340401        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: SJCHGC09205(evalue: 1e-05, score=53.1)">
      <seq>attgaacaaaaatcatccagctgcaattctgttcaagatccaacttatacttaagcaagctactgagtgtgcattcactttgttagaacattaagggcttaaaacttttactaattgtctagagcctcggcaactttgtcccttttaagttctcggacacttggactatcattgcaaccatattgttggttttagataatggatattcccagattatgatagaagttctttgtttattgggatgtaatttcattgcctgtatgtttattgcaagtccttggtttttacttctagtagaaagtaggaggttcttgaagctgtcgactgaatgttcgttcacattagttgctgctcaagctgatgagaacctttacatacacaaacatatgtggaattgttcattgtgaattttttttgtgctcaacatcacaatcctcaaaaaaaaaaaaaaaaaactcgagactagttctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0100J12.1" temp_strand="+" temp_description="C09HBa0100J12.1  EU139070.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0100J12 upload_account_name:spain">
        <position start="87656" stop="88693"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87956" g_stop="88392" g_length="437"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="437" r_length="437" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="438" polyA_stop="456"/>
      <MATCH_line gen_id="C09HBa0100J12.1" gen_strand="+" ref_id="SGN-U340401" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>437</cumulative_length_of_scored_exons>
        <coverage percentage="0.928" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0100J12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U340401" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="87956" e_stop="88392"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGAACAAAAATCATCCAGCTGCAATTCTGTTCAAGATCCAACTTATACTTAAGCAAGCTACTGAGTGTGCATTCACTTTGTTAGAACATTAAGGGCTTAAAACTTTTACTAATTGTCTAGAGCCTCGGCAACTTTGTCCCTTTTAAGTTCTCGGACACTTGGACTATCATTGCAACCATATTGTTGGTTTTAGATAATGGATATTCCCAGATTATGATAGAAGTTCTTTGTTTATTGGGATGTAATTTCATTGCCTGTATGTTTATTGCAAGTCCTTGGTTTTTACTTCTAGTAGAAAGTAGGAGGTTCTTGAAGCTGTCGACTGAATGTTCGTTCACATTAGTTGCTGCTCAAGCTGATGAGAACCTTTACATACACAAACATCTGTGGAATTGTTCATTGTGAATTTTTTTTGTGCTCAACATCACAATCCTC</genome_strand>
        <mrna_strand>ATTGAACAAAAATCATCCAGCTGCAATTCTGTTCAAGATCCAACTTATACTTAAGCAAGCTACTGAGTGTGCATTCACTTTGTTAGAACATTAAGGGCTTAAAACTTTTACTAATTGTCTAGAGCCTCGGCAACTTTGTCCCTTTTAAGTTCTCGGACACTTGGACTATCATTGCAACCATATTGTTGGTTTTAGATAATGGATATTCCCAGATTATGATAGAAGTTCTTTGTTTATTGGGATGTAATTTCATTGCCTGTATGTTTATTGCAAGTCCTTGGTTTTTACTTCTAGTAGAAAGTAGGAGGTTCTTGAAGCTGTCGACTGAATGTTCGTTCACATTAGTTGCTGCTCAAGCTGATGAGAACCTTTACATACACAAACATATGTGGAATTGTTCATTGTGAATTTTTTTTGTGCTCAACATCACAATCCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U315672" ref_strand="+" ref_description="SGN-U315672        Tomato 200607 #1 [21 ESTs aligned] arabidopsis/peptide: | Symbol: None | phytosulfokines-related, contains similarities to phytosulfokines from (Arabidopsis thaliana) | chr3:16302187-16303137 REVERSE | Aliases: None(evalue: 9e-07, score=51.6) genbank/nr: gi|23466387|tpg|DAA00284.1| TPA: putative phytosulfokine peptide precursor [Lycopersicon esculentum](evalue: 6e-14, score=81.6)">
      <seq>ctttttctctctctctctcatcctcacaaagacaataaaaagaagaattttaagcaaaaaaaaaaatcaataaatcaaaggcaaaaaaatggagcaaaaaaatattttttttcttctttctcttatggttttactactaatttcctacacaacaacagctcgtttattgccaacaattaattctcaagaatctaatgggattattagtaataatccaatttcctcacaagtacaagaagatttcaatgatgtaagttctttctcttattttccacccttatatacggtatatgagcttatccgaatcgatatgatcagtgaaaattcatattatcgatttgagatttcacttctttcaaaaacaaaaaaaaattagctagtgagaagattttgtaattagtaaaaaaaattctttgttaattctatttagcgataaattatcaaaatattttgtttgctatgaataataaagcaataatttcaatttgtttttgtgtttaggcctagtaattttttagcctattgattttagctagctcgtatttgaatttttcttttttatggaaaagtaattttttatatatacgatataattttttttaaaaaaatattcagttgatcacctttcatttatttcggagttaagagataaaaaggggttcaatttaaatattttcttccaaaaagtatggcaaaaataattttttttgtacatatataaattgttgaatcgtctagatattacatataacttctaagaatatatatagagtaataaaatttttttttgtattttctttaatacacttattataatttttgagctccgattttaaaaattcatatatacgactctaacttcgaattgattttttttattgaaatagctcatgggaatagaagaatgtgaagaaaaagatgaaatttgtttcaagagaagaatgactgcagaggctcatttagattatatttatactcaacacaagccaaaacattgaacaagtttatattaatattattttttttcttaaggatggttaattagtaatgttcttttctatactttaaattatagtacaaagtactaaaagaaactttaatttattaaaacttgtatttcgatgtatcataagattgtagtactatgttttgtgagaattataaagatagccaaaagtttaattaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0100J12.1" temp_strand="-" temp_description="C09HBa0100J12.1  EU139070.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0100J12 upload_account_name:spain">
        <position start="92157" stop="90265"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91857" g_stop="91670" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="188" r_length="188" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91669" i_stop="91562" i_length="108">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91561" g_stop="90566" g_length="996"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="1184" r_length="996" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0100J12.1" gen_strand="-" ref_id="SGN-U315672" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1184</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0100J12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U315672" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91857" e_stop="91670"/>
          <exon e_start="91561" e_stop="90566"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGCAAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAGGTATTGATTTTTTTTTATTTTAAATTTTTTAATGAATTTCTATAGAGCTTCAAAAATTAAATTATTGTTGAATAGTAATTAATTAATTAATTATTATTTTTTTCACAGAATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAACGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATGTATCATAAGATTGTAGTACTATGTTTTGTGAGAATTATAAAGATAGCCAAAAGTTTAATT</genome_strand>
        <mrna_strand>CTTTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGCAAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAG............................................................................................................AATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTTAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAAAGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATGTATCATAAGATTGTAGTACTATGTTTTGTGAGAATTATAAAGATAGCCAAAAGTTTAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U339986" ref_strand="+" ref_description="SGN-U339986        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | tubulin family protein, similar to SP:Q96CW5 Gamma-tubulin complex component 3 {Homo sapiens} | chr5:2056588-2059748 FORWARD | Aliases: MPH15.2, MPH15_2(evalue: 1e-36, score=150) genbank/nr: gi|15240121|ref|NP_196286.1| tubulin family [Arabidopsis thaliana] gi|9759296|dbj|BAB09802.1| gamma-tubulin interacting protein-like [Arabidopsis thaliana] gi|20466522|gb|AAM20578.1| gamma-tubulin interacting protein-like [Arabidopsis thaliana] gi|34365713|gb|AAQ65168.1| At5g06680 [Arabidopsis thaliana](evalue: 1e-34, score=150)">
      <seq>catttccagccgccggccaccgcaaaatccaccatgagacgacggcgacggggggaggcctagatctagtgaaagagctagtacaccgcattactttccacttctacgccgccctccaccgccgactcccaccagtccactatcttaaaccctaaccctgtcataccttccgatcaacagtatcaccaagcgctaagatacgccattcgcatactctccagtcgaatgacaccttcaattgctgcggatgagtccgcaatggtggaatccattaagcgacggttagctactcaaggtaaatcgtctgatgccttaacttttgctgatgtatataccaaattctcgttgaaaacaggacagggtagtgtaagaaacaaatgggctgttctttatttgcttaaaaccgtctccgaagatcggaaaattcaaaaacaccagtctgcttctgtagcacctaacgggtttcttagctctgcattgtcgggtggtttaccggaattggttggtagtgaatcgaatcgtaatttcgggctcagaaatgatagttctaaggttttgaataatgtgcagggtaacatggataatagtaaggattctaggggtttggtgggtaaattgggtaaaatggagaaaggctatagtgatcgtagtctgagtgatgattttcagagtttgaattgtgtaggtgataattcgagagttttgaggggtaaaggtgaaatagggaaaggatggagtggaggggttttgatggtttccaaggatccggagaacttacgtgatatggcgtataaggagtttgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0100J12.1" temp_strand="+" temp_description="C09HBa0100J12.1  EU139070.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0100J12 upload_account_name:spain">
        <position start="102725" stop="104123"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103025" g_stop="103823" g_length="799"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="804" r_length="804" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0100J12.1" gen_strand="+" ref_id="SGN-U339986" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>799</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0100J12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U339986" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103025" e_stop="103823"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCTCC-GCCGCCGGCCACCGC-AGATCCACCATG-GACGACGGCGAC-CGAAGAGCACTAGATCTAGTGAAAGAGCTAGTACACCGC-TTACTTTCCACTTCTACGCCGCCCTCCACCGCCGACTCCCACCAGTCCACTATCTTAAACCCTAACCCTGTCATACCTTCCGATCAACAGTATCACCAAGCGCTAAGATACGCCATTCGCATACTCTCCAGTCGAATGACACCTTCAATTGCTGCGGATGAGTCCGCAATGGTGGAATCCATTAAGCGACGGTTAGCTACTCAAGGTAAATCGTCTGATGCCTTAACTTTTGCTGATGTATATACCAAATTCTCGTTGAAAACAGGACAGGGTAGTGTAAGAAACAAATGGGCTGTTCTTTATTTGCTTAAAACCGTCTCCGAAGATCGGAAAATTCAAAAACACCAGTCTGCTTCTGTAGCACCTAACGGGTTTCTTAGCTCTGCATTGTCGGGTGGTTTACCGGAATTGGTTGGTAGTGAATCGAATCGTAATTTCGGGCTCAGAAATGATAGTTCTAAGGTTTTGAATAATGTGCAGGGTAACATGGATAATAGTAAGGATTCTAGGGGTTTGGTGGGTAAATTGGGTAAAATGGAGAAAGGCTATAGTGATCGTAGTCTGAGTGATGATTTTCAGAGTTTGAATTGTGTAGGTGATAATTCGAGAGTTTTGAGGGGTAAAGGTGAAGTAGGGAAGGGATGGAGTGGAGGGGTTTTGATGGTTTCCAAGGATCCGGAGAACTTACGTGATATGGCGTATAAGGAGTTTGTA</genome_strand>
        <mrna_strand>CATTTCCAGCCGCCGGCCACCGCAAAATCCACCATGAGACGACGGCGACGGGGGGAGGCCTAGATCTAGTGAAAGAGCTAGTACACCGCATTACTTTCCACTTCTACGCCGCCCTCCACCGCCGACTCCCACCAGTCCACTATCTTAAACCCTAACCCTGTCATACCTTCCGATCAACAGTATCACCAAGCGCTAAGATACGCCATTCGCATACTCTCCAGTCGAATGACACCTTCAATTGCTGCGGATGAGTCCGCAATGGTGGAATCCATTAAGCGACGGTTAGCTACTCAAGGTAAATCGTCTGATGCCTTAACTTTTGCTGATGTATATACCAAATTCTCGTTGAAAACAGGACAGGGTAGTGTAAGAAACAAATGGGCTGTTCTTTATTTGCTTAAAACCGTCTCCGAAGATCGGAAAATTCAAAAACACCAGTCTGCTTCTGTAGCACCTAACGGGTTTCTTAGCTCTGCATTGTCGGGTGGTTTACCGGAATTGGTTGGTAGTGAATCGAATCGTAATTTCGGGCTCAGAAATGATAGTTCTAAGGTTTTGAATAATGTGCAGGGTAACATGGATAATAGTAAGGATTCTAGGGGTTTGGTGGGTAAATTGGGTAAAATGGAGAAAGGCTATAGTGATCGTAGTCTGAGTGATGATTTTCAGAGTTTGAATTGTGTAGGTGATAATTCGAGAGTTTTGAGGGGTAAAGGTGAAATAGGGAAAGGATGGAGTGGAGGGGTTTTGATGGTTTCCAAGGATCCGGAGAACTTACGTGATATGGCGTATAAGGAGTTTGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U342359" ref_strand="+" ref_description="SGN-U342359        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | tubulin family protein, similar to SP:Q96CW5 Gamma-tubulin complex component 3 {Homo sapiens} | chr5:2056588-2059748 FORWARD | Aliases: MPH15.2, MPH15_2(evalue: 5e-66, score=247) genbank/nr: gi|15240121|ref|NP_196286.1| tubulin family [Arabidopsis thaliana] gi|9759296|dbj|BAB09802.1| gamma-tubulin interacting protein-like [Arabidopsis thaliana] gi|20466522|gb|AAM20578.1| gamma-tubulin interacting protein-like [Arabidopsis thaliana] gi|34365713|gb|AAQ65168.1| At5g06680 [Arabidopsis thaliana](evalue: 4e-64, score=247)">
      <seq>cagtttggtttgctgagccaattgtgaagatgagattgatggctgttttagttgataactgtaagagcttaaagggtggggcaatggctggtgcaattcacatgcatgctcagcatggtgatccactcgttaatgattttatgaagaggttattgcgtcgggtgtgttcccctctttttgagatggtgaggagatgggtgcttgaaggagaacttgaagatatatttgctgagtttttcattgtgagtcaacctgtaaaagacgagtctctttggagagaaggttaccggcttcatgctgccatgcttcctgcttttatttcccagtctcttgccaaacagatattaaggactggtaaatcaattaactttctcagagtttgttgtgatgatcgtggttgggctgatgctgcaacagaagcagcagcagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0100J12-qqFSn/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0100J12.1" temp_strand="+" temp_description="C09HBa0100J12.1  EU139070.1 htgs_phase:2 submitted_to_sgn_as:C09HBa0100J12 upload_account_name:spain">
        <position start="103930" stop="104959"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104230" g_stop="104659" g_length="430"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="430" r_length="430" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0100J12.1" gen_strand="+" ref_id="SGN-U342359" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>430</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0100J12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U342359" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104230" e_stop="104659"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGTTTGGTTTGCTGAGCCAATTGTGAAGATGAGATTGATGGCTGTTTTAGTTGATAACTGTAAGAGCTTAAAGGGTGGGGCAATGGCTGGTGCAATTCACATGCATGCTCAGCATGGTGATCCACTCGTTAATGATTTTATGAAGAGGTTATTGCGTCGGGTGTGTTCCCCTCTTTTTGAGATGGTGAGGAGATGGGTGCTTGAAGGAGAACTTGAAGATATATTTGCTGAGTTTTTCATTGTGAGTCAACCTGTAAAAGACGAGTCTCTTTGGAGAGAAGGTTACCGGCTTCATGCTGCCATGCTTCCTGCTTTTATTTCCCAGTCTCTTGCCAAACAGATATTAAGGACTGGTAAATCAATTAACTTTCTCAGAGTTTGTTGTGATGATCGTGGTTGGGCTGATGCTGCAACAGAAGCAGCAGCAGC</genome_strand>
        <mrna_strand>CAGTTTGGTTTGCTGAGCCAATTGTGAAGATGAGATTGATGGCTGTTTTAGTTGATAACTGTAAGAGCTTAAAGGGTGGGGCAATGGCTGGTGCAATTCACATGCATGCTCAGCATGGTGATCCACTCGTTAATGATTTTATGAAGAGGTTATTGCGTCGGGTGTGTTCCCCTCTTTTTGAGATGGTGAGGAGATGGGTGCTTGAAGGAGAACTTGAAGATATATTTGCTGAGTTTTTCATTGTGAGTCAACCTGTAAAAGACGAGTCTCTTTGGAGAGAAGGTTACCGGCTTCATGCTGCCATGCTTCCTGCTTTTATTTCCCAGTCTCTTGCCAAACAGATATTAAGGACTGGTAAATCAATTAACTTTCTCAGAGTTTGTTGTGATGATCGTGGTTGGGCTGATGCTGCAACAGAAGCAGCAGCAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>18</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="3082" PGL_stop="783"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="3082" e_stop="3068"/>
            <exon e_start="1087" e_stop="783"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.477" acc_prob="0.000" e_score="0.733"/>
          <exon-only e_score="0.928"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.733">
            <gDNA_exon_boundary e_start="3082" e_stop="3068" e_length="15"/>
          </exon>
          <intron i_serial="1" don_prob="0.477" acc_prob="0.000">
            <gDNA_intron_boundary i_start="3067" i_stop="1088" i_length="1980"/>
          </intron>
          <exon e_serial="2" e_score="0.928">
            <gDNA_exon_boundary e_start="1087" e_stop="783" e_length="305"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3082" stop="3068"/>
              <exon start="1087" stop="783"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U333512" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTTGCATTTTTTTT : ATTTGAAAAAACCAAAACCATCAAAATATTAATTAGAACATAGTAGAAACTTGCATATCAAAGTTTTACAGTAACCAAGCCTAAAAAAAACTCTTTTTTTTTCTTTTCAGAATTCAAAATACTAATAAAACCTCAGAAAACAAAACTTGTTTTTGAGTCTGCTTGTTATTTCACCAAGGTCATATAATATAATCCTAAAATGACCAATCTAAGAGGAATTTATTTTTGGCAGATCAACAACTCAACAATCTCAACACTTGGAACTGCTGAAATTTAGTAGGGCTCAACGGGCTTGCGGAAGCTTG</gDNA_template>
            <first_frame> S  C  I  F  F  :  I  *  K  N  Q  N  H  Q  N  I  N  *  N  I  V  E  T  C  I  S  K  F  Y  S  N  Q  A  *  K  K  L  F  F  F  L  F  R  I  Q  N  T  N  K  T  S  E  N  K  T  C  F  *  V  C  L  L  F  H  Q  G  H  I  I  *  S  *  N  D  Q  S  K  R  N  L  F  L  A  D  Q  Q  L  N  N  L  N  T  W  N  C  *  N  L  V  G  L  N  G  L  A  E  A   </first_frame>
            <second_frame>  L  A  F  F  L :   F  E  K  T  K  T  I  K  I  L  I  R  T  *  *  K  L  A  Y  Q  S  F  T  V  T  K  P  K  K  N  S  F  F  F  F  S  E  F  K  I  L  I  K  P  Q  K  T  K  L  V  F  E  S  A  C  Y  F  T  K  V  I  *  Y  N  P  K  M  T  N  L  R  G  I  Y  F  W  Q  I  N  N  S  T  I  S  T  L  G  T  A  E  I  *  *  G  S  T  G  L  R  K  L  </second_frame>
            <third_frame>   L  H  F  F   : Y  L  K  K  P  K  P  S  K  Y  *  L  E  H  S  R  N  L  H  I  K  V  L  Q  *  P  S  L  K  K  T  L  F  F  S  F  Q  N  S  K  Y  *  *  N  L  R  K  Q  N  L  F  L  S  L  L  V  I  S  P  R  S  Y  N  I  I  L  K  *  P  I  *  E  E  F  I  F  G  R  S  T  T  Q  Q  S  Q  H  L  E  L  L  K  F  S  R  A  Q  R  A  C  G  S  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C09HBa0100J12.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="8615" PGL_stop="4011"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="8615" e_stop="8522"/>
            <exon e_start="7359" e_stop="7289"/>
            <exon e_start="7204" e_stop="6990"/>
            <exon e_start="6881" e_stop="6853"/>
            <exon e_start="6770" e_stop="6732"/>
            <exon e_start="6625" e_stop="6486"/>
            <exon e_start="5055" e_stop="5011"/>
            <exon e_start="4918" e_stop="4828"/>
            <exon e_start="4534" e_stop="4432"/>
            <exon e_start="4344" e_stop="4011"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.853" acc_prob="0.999" e_score="0.979"/>
          <exon-intron don_prob="0.984" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.913" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.989" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.979">
            <gDNA_exon_boundary e_start="8615" e_stop="8522" e_length="94"/>
          </exon>
          <intron i_serial="1" don_prob="0.853" acc_prob="0.999">
            <gDNA_intron_boundary i_start="8521" i_stop="7360" i_length="1162"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="7359" e_stop="7289" e_length="71"/>
          </exon>
          <intron i_serial="2" don_prob="0.984" acc_prob="1.000">
            <gDNA_intron_boundary i_start="7288" i_stop="7205" i_length="84"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="7204" e_stop="6990" e_length="215"/>
          </exon>
          <intron i_serial="3" don_prob="0.990" acc_prob="0.000">
            <gDNA_intron_boundary i_start="6989" i_stop="6882" i_length="108"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="6881" e_stop="6853" e_length="29"/>
          </exon>
          <intron i_serial="4" don_prob="0.994" acc_prob="0.997">
            <gDNA_intron_boundary i_start="6852" i_stop="6771" i_length="82"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="6770" e_stop="6732" e_length="39"/>
          </exon>
          <intron i_serial="5" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="6731" i_stop="6626" i_length="106"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="6625" e_stop="6486" e_length="140"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="6485" i_stop="5056" i_length="1430"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="5055" e_stop="5011" e_length="45"/>
          </exon>
          <intron i_serial="7" don_prob="0.913" acc_prob="1.000">
            <gDNA_intron_boundary i_start="5010" i_stop="4919" i_length="92"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="4918" e_stop="4828" e_length="91"/>
          </exon>
          <intron i_serial="8" don_prob="0.998" acc_prob="0.994">
            <gDNA_intron_boundary i_start="4827" i_stop="4535" i_length="293"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="4534" e_stop="4432" e_length="103"/>
          </exon>
          <intron i_serial="9" don_prob="1.000" acc_prob="0.989">
            <gDNA_intron_boundary i_start="4431" i_stop="4345" i_length="87"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="4344" e_stop="4011" e_length="334"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8615" stop="8522"/>
              <exon start="7359" stop="7289"/>
              <exon start="7204" stop="6990"/>
              <exon start="6881" stop="6853"/>
              <exon start="6770" stop="6732"/>
              <exon start="6625" stop="6486"/>
              <exon start="5055" stop="5011"/>
              <exon start="4918" stop="4828"/>
              <exon start="4534" stop="4432"/>
              <exon start="4344" stop="4011"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U316129" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CATAGTACACCCTAGCAGTCTCTTTCTTCCTCCATTTCTCCTCTAAAACCCTAATTTCTCTCTAAAACCCTAAAAGCAGCTATGGAGTTTTGGG : GTGCTGAGGTGAAAAGTGGAGAGCCATTAACTGTACAGCCTGGAGATGGGATGGTTTTGCATCTTTCACAG : GCATCTCTAGGTGAGTTGAAGAAGGATAAATCAGAAAGTGCCTGCTTGTCAGTGAATATTGATGGCAAGAAACTTGTTCTTGGGACACTCAACTCAGAGAAGGTGCCTCAACAGCAATTTGACCTGGTTTTTGATAAAGACTTTGAATTATCTCACAACTTGAAAAGTGGCAGTGTCTACTTTTTTGGATACAAGGCAACTAACCCGTTTGATGA : GGAAGAGGATGACGAAGATGATTATGATG : ATTCTGATGAGGATATCCCCCTCACTCTTGCCAACAGTG : GTAAACCTGACCCTAAAGAGGCTGGGAAGTCTAACGCTGGAAAGGATTCTGCTTCAGGAAAGCAGAAGGTGAGGATTGTGGAGCCTACTAAAGATGATGAAGATGAGAGCTCTGATGATGATGGTTCTGACTTGGGAGAG : GATGAAGACGACTCTGATGAGAGTGAGGAGGAGACACCAAAGAAG : GCTGAGCCTGCAAAAAAGAGGAAGGCAGATTCAGCTACAAAAACACCTGTCACTGATAAAAAGGCAAAATTGACAACACCTCAAAAAACTG : ATGGCAAAAAAGGTGGTGTCCATGTAGCAACACCGCACCCTTCTAAGCAGGCTAGTAAGACTCCAAAATCAGCTGGATCTCATCACTGCAAGCCGTGCAACAG : GAGTTTTGGTTCTGAAGGTGCTCTCGAATCTCACTCGAAAGCTAAACACAGTGCTGGAAAGTAAATAGACATGGAGACATTTAGTCTTTGTTTGGTTGTTACCTATGATCAGAAGAGAGCTTTTTTAGTCGTTTTTTTCCCCGTTTCGATTTGGTTCATCTGATGTAAAGGAAAGATGAGTTACATCTATTATGATCTATCTCTAGGTCAATCATCTGTTTTGATGTTTAAGACTTGTTATGTTTTCAATGAGAGTTTTGGATTGAATCAGAGAATGTTATTGCCTGTTGGTATCTTGTTATTTGGGAAAAAAAAAACTAATGTTAACATTACA</gDNA_template>
            <first_frame> H  S  T  P  *  Q  S  L  S  S  S  I  S  P  L  K  P  *  F  L  S  K  T  L  K  A  A  M  E  F  W   : G  A  E  V  K  S  G  E  P  L  T  V  Q  P  G  D  G  M  V  L  H  L  S  Q  :  A  S  L  G  E  L  K  K  D  K  S  E  S  A  C  L  S  V  N  I  D  G  K  K  L  V  L  G  T  L  N  S  E  K  V  P  Q  Q  Q  F  D  L  V  F  D  K  D  F  E  L  S  H  N  L  K  S  G  S  V  Y  F  F  G  Y  K  A  T  N  P  F  D  E :   E  E  D  D  E  D  D  Y  D   : D  S  D  E  D  I  P  L  T  L  A  N  S   : G  K  P  D  P  K  E  A  G  K  S  N  A  G  K  D  S  A  S  G  K  Q  K  V  R  I  V  E  P  T  K  D  D  E  D  E  S  S  D  D  D  G  S  D  L  G  E  :  D  E  D  D  S  D  E  S  E  E  E  T  P  K  K  :  A  E  P  A  K  K  R  K  A  D  S  A  T  K  T  P  V  T  D  K  K  A  K  L  T  T  P  Q  K  T   : D  G  K  K  G  G  V  H  V  A  T  P  H  P  S  K  Q  A  S  K  T  P  K  S  A  G  S  H  H  C  K  P  C  N  R :   S  F  G  S  E  G  A  L  E  S  H  S  K  A  K  H  S  A  G  K  *  I  D  M  E  T  F  S  L  C  L  V  V  T  Y  D  Q  K  R  A  F  L  V  V  F  F  P  V  S  I  W  F  I  *  C  K  G  K  M  S  Y  I  Y  Y  D  L  S  L  G  Q  S  S  V  L  M  F  K  T  C  Y  V  F  N  E  S  F  G  L  N  Q  R  M  L  L  P  V  G  I  L  L  F  G  K  K  K  T  N  V  N  I  T </first_frame>
            <second_frame>  I  V  H  P  S  S  L  F  L  P  P  F  L  L  *  N  P  N  F  S  L  K  P  *  K  Q  L  W  S  F  G  :  V  L  R  *  K  V  E  S  H  *  L  Y  S  L  E  M  G  W  F  C  I  F  H  R :   H  L  *  V  S  *  R  R  I  N  Q  K  V  P  A  C  Q  *  I  L  M  A  R  N  L  F  L  G  H  S  T  Q  R  R  C  L  N  S  N  L  T  W  F  L  I  K  T  L  N  Y  L  T  T  *  K  V  A  V  S  T  F  L  D  T  R  Q  L  T  R  L  M   : R  K  R  M  T  K  M  I  M  M  :  I  L  M  R  I  S  P  S  L  L  P  T  V  :  V  N  L  T  L  K  R  L  G  S  L  T  L  E  R  I  L  L  Q  E  S  R  R  *  G  L  W  S  L  L  K  M  M  K  M  R  A  L  M  M  M  V  L  T  W  E  R :   M  K  T  T  L  M  R  V  R  R  R  H  Q  R  R :   L  S  L  Q  K  R  G  R  Q  I  Q  L  Q  K  H  L  S  L  I  K  R  Q  N  *  Q  H  L  K  K  L  :  M  A  K  K  V  V  S  M  *  Q  H  R  T  L  L  S  R  L  V  R  L  Q  N  Q  L  D  L  I  T  A  S  R  A  T   : G  V  L  V  L  K  V  L  S  N  L  T  R  K  L  N  T  V  L  E  S  K  *  T  W  R  H  L  V  F  V  W  L  L  P  M  I  R  R  E  L  F  *  S  F  F  S  P  F  R  F  G  S  S  D  V  K  E  R  *  V  T  S  I  M  I  Y  L  *  V  N  H  L  F  *  C  L  R  L  V  M  F  S  M  R  V  L  D  *  I  R  E  C  Y  C  L  L  V  S  C  Y  L  G  K  K  K  L  M  L  T  L   </second_frame>
            <third_frame>   *  Y  T  L  A  V  S  F  F  L  H  F  S  S  K  T  L  I  S  L  *  N  P  K  S  S  Y  G  V  L  G :   C  *  G  E  K  W  R  A  I  N  C  T  A  W  R  W  D  G  F  A  S  F  T   : G  I  S  R  *  V  E  E  G  *  I  R  K  C  L  L  V  S  E  Y  *  W  Q  E  T  C  S  W  D  T  Q  L  R  E  G  A  S  T  A  I  *  P  G  F  *  *  R  L  *  I  I  S  Q  L  E  K  W  Q  C  L  L  F  W  I  Q  G  N  *  P  V  *  *  :  G  R  G  *  R  R  *  L  *  * :   F  *  *  G  Y  P  P  H  S  C  Q  Q  W :   *  T  *  P  *  R  G  W  E  V  *  R  W  K  G  F  C  F  R  K  A  E  G  E  D  C  G  A  Y  *  R  *  *  R  *  E  L  *  *  *  W  F  *  L  G  R   : G  *  R  R  L  *  *  E  *  G  G  D  T  K  E   : G  *  A  C  K  K  E  E  G  R  F  S  Y  K  N  T  C  H  *  *  K  G  K  I  D  N  T  S  K  N  * :   W  Q  K  R  W  C  P  C  S  N  T  A  P  F  *  A  G  *  *  D  S  K  I  S  W  I  S  S  L  Q  A  V  Q  Q  :  E  F  W  F  *  R  C  S  R  I  S  L  E  S  *  T  Q  C  W  K  V  N  R  H  G  D  I  *  S  L  F  G  C  Y  L  *  S  E  E  S  F  F  S  R  F  F  P  R  F  D  L  V  H  L  M  *  R  K  D  E  L  H  L  L  *  S  I  S  R  S  I  I  C  F  D  V  *  D  L  L  C  F  Q  *  E  F  W  I  E  S  E  N  V  I  A  C  W  Y  L  V  I  W  E  K  K  N  *  C  *  H  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0100J12.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8561" stop="8522"/>
                    <exon start="7359" stop="7289"/>
                    <exon start="7204" stop="6990"/>
                    <exon start="6881" stop="6853"/>
                    <exon start="6770" stop="6732"/>
                    <exon start="6625" stop="6486"/>
                    <exon start="5055" stop="5011"/>
                    <exon start="4918" stop="4828"/>
                    <exon start="4534" stop="4432"/>
                    <exon start="4344" stop="4281"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>834</number_coding_nucleotides>
                  <number_encoded_amino_acids>278</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FLSKTLKAAMEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKSESACLSVNIDGKKLVLGTLNSEKVPQQQFDLVFDKDFELSHNLKSGSVYFFGYKATNPFDEEEDDEDDYDDSDEDIPLTLANSGKPDPKEAGKSNAGKDSASGKQKVRIVEPTKDDEDESSDDDGSDLGEDEDDSDESEEETPKKAEPAKKRKADSATKTPVTDKKAKLTTPQKTDGKKGGVHVATPHPSKQASKTPKSAGSHHCKPCNRSFGSEGALESHSKAKHSAGK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="7359" e_stop="7289"/>
            <exon e_start="7204" e_stop="6853"/>
            <exon e_start="6770" e_stop="6732"/>
            <exon e_start="6625" e_stop="6486"/>
            <exon e_start="5055" e_stop="5032"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.984" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.997" e_score="0.997"/>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="0.993"/>
          <exon-only e_score="0.958"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="7359" e_stop="7289" e_length="71"/>
          </exon>
          <intron i_serial="1" don_prob="0.984" acc_prob="1.000">
            <gDNA_intron_boundary i_start="7288" i_stop="7205" i_length="84"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="7204" e_stop="6853" e_length="352"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.997">
            <gDNA_intron_boundary i_start="6852" i_stop="6771" i_length="82"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="6770" e_stop="6732" e_length="39"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="6731" i_stop="6626" i_length="106"/>
          </intron>
          <exon e_serial="4" e_score="0.993">
            <gDNA_exon_boundary e_start="6625" e_stop="6486" e_length="140"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="6485" i_stop="5056" i_length="1430"/>
          </intron>
          <exon e_serial="5" e_score="0.958">
            <gDNA_exon_boundary e_start="5055" e_stop="5032" e_length="24"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7359" stop="7289"/>
              <exon start="7204" stop="6853"/>
              <exon start="6770" stop="6732"/>
              <exon start="6625" stop="6486"/>
              <exon start="5055" stop="5032"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335502" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTGCTGAGGTGAAAAGTGGAGAGCCATTAACTGTACAGCCTGGAGATGGGATGGTTTTGCATCTTTCACAG : GCATCTCTAGGTGAGTTGAAGAAGGATAAATCAGAAAGTGCCTGCTTGTCAGTGAATATTGATGGCAAGAAACTTGTTCTTGGGACACTCAACTCAGAGAAGGTGCCTCAACAGCAATTTGACCTGGTTTTTGATAAAGACTTTGAATTATCTCACAACTTGAAAAGTGGCAGTGTCTACTTTTTTGGATACAAGGCAACTAACCCGTTTGATGAATATCCTTTTTTATTTGTCTGTTAACTTTTATTTCTTATAGGCATTTATTTTTCGTTCGATGTAAAATTTTGTGTATTTGTTTCATTGACCAAACTTCTGTGGTTCACGGAAGAGGATGACGAAGATGATTATGATG : ATTCTGATGAGGATATCCCCCTCACTCTTGCCAACAGTG : GTAAACCTGACCCTAAAGAGGCTGGGAAGTCTAACGCTGGAAAGGATTCTGCTTCAGGAAAGCAGAAGGTGAGGATTGTGGAGCCTACTAAAGATGATGAAGATGAGAGCTCTGATGATGATGGTTCTGACTTGGGAGAG : GATGAAGACGACTCTGATGAGAGT</gDNA_template>
            <first_frame> V  L  R  *  K  V  E  S  H  *  L  Y  S  L  E  M  G  W  F  C  I  F  H  R :   H  L  *  V  S  *  R  R  I  N  Q  K  V  P  A  C  Q  *  I  L  M  A  R  N  L  F  L  G  H  S  T  Q  R  R  C  L  N  S  N  L  T  W  F  L  I  K  T  L  N  Y  L  T  T  *  K  V  A  V  S  T  F  L  D  T  R  Q  L  T  R  L  M  N  I  L  F  Y  L  S  V  N  F  Y  F  L  *  A  F  I  F  R  S  M  *  N  F  V  Y  L  F  H  *  P  N  F  C  G  S  R  K  R  M  T  K  M  I  M  M  :  I  L  M  R  I  S  P  S  L  L  P  T  V  :  V  N  L  T  L  K  R  L  G  S  L  T  L  E  R  I  L  L  Q  E  S  R  R  *  G  L  W  S  L  L  K  M  M  K  M  R  A  L  M  M  M  V  L  T  W  E  R :   M  K  T  T  L  M  R   </first_frame>
            <second_frame>  C  *  G  E  K  W  R  A  I  N  C  T  A  W  R  W  D  G  F  A  S  F  T   : G  I  S  R  *  V  E  E  G  *  I  R  K  C  L  L  V  S  E  Y  *  W  Q  E  T  C  S  W  D  T  Q  L  R  E  G  A  S  T  A  I  *  P  G  F  *  *  R  L  *  I  I  S  Q  L  E  K  W  Q  C  L  L  F  W  I  Q  G  N  *  P  V  *  *  I  S  F  F  I  C  L  L  T  F  I  S  Y  R  H  L  F  F  V  R  C  K  I  L  C  I  C  F  I  D  Q  T  S  V  V  H  G  R  G  *  R  R  *  L  *  * :   F  *  *  G  Y  P  P  H  S  C  Q  Q  W :   *  T  *  P  *  R  G  W  E  V  *  R  W  K  G  F  C  F  R  K  A  E  G  E  D  C  G  A  Y  *  R  *  *  R  *  E  L  *  *  *  W  F  *  L  G  R   : G  *  R  R  L  *  *  E  </second_frame>
            <third_frame>   A  E  V  K  S  G  E  P  L  T  V  Q  P  G  D  G  M  V  L  H  L  S  Q  :  A  S  L  G  E  L  K  K  D  K  S  E  S  A  C  L  S  V  N  I  D  G  K  K  L  V  L  G  T  L  N  S  E  K  V  P  Q  Q  Q  F  D  L  V  F  D  K  D  F  E  L  S  H  N  L  K  S  G  S  V  Y  F  F  G  Y  K  A  T  N  P  F  D  E  Y  P  F  L  F  V  C  *  L  L  F  L  I  G  I  Y  F  S  F  D  V  K  F  C  V  F  V  S  L  T  K  L  L  W  F  T  E  E  D  D  E  D  D  Y  D   : D  S  D  E  D  I  P  L  T  L  A  N  S   : G  K  P  D  P  K  E  A  G  K  S  N  A  G  K  D  S  A  S  G  K  Q  K  V  R  I  V  E  P  T  K  D  D  E  D  E  S  S  D  D  D  G  S  D  L  G  E  :  D  E  D  D  S  D  E  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0100J12.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="6964" stop="6853"/>
                    <exon start="6770" stop="6732"/>
                    <exon start="6625" stop="6486"/>
                    <exon start="5055" stop="5032"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>315</number_coding_nucleotides>
                  <number_encoded_amino_acids>105</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLFLIGIYFSFDVKFCVFVSLTKLLWFTEEDDEDDYDDSDEDIPLTLANSGKPDPKEAGKSNAGKDSASGKQKVRIVEPTKDDEDESSDDDGSDLGEDEDDSDES</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0100J12.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7357" stop="7289"/>
                    <exon start="7204" stop="6965"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>306</number_coding_nucleotides>
                  <number_encoded_amino_acids>102</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKSESACLSVNIDGKKLVLGTLNSEKVPQQQFDLVFDKDFELSHNLKSGSVYFFGYKATNPFDEYPFLFVC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="11941" PGL_stop="20096"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="11941" e_stop="11981"/>
            <exon e_start="12080" e_stop="12197"/>
            <exon e_start="13079" e_stop="13149"/>
            <exon e_start="13977" e_stop="14033"/>
            <exon e_start="14180" e_stop="14271"/>
            <exon e_start="15042" e_stop="15089"/>
            <exon e_start="15595" e_stop="15715"/>
            <exon e_start="15805" e_stop="15851"/>
            <exon e_start="16912" e_stop="16993"/>
            <exon e_start="18716" e_stop="18792"/>
            <exon e_start="18936" e_stop="19055"/>
            <exon e_start="19333" e_stop="19407"/>
            <exon e_start="19495" e_stop="20096"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.963" e_score="1.000"/>
          <exon-intron don_prob="0.507" acc_prob="0.958" e_score="1.000"/>
          <exon-intron don_prob="0.303" acc_prob="0.969" e_score="1.000"/>
          <exon-intron don_prob="0.805" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.760" e_score="1.000"/>
          <exon-intron don_prob="0.942" acc_prob="0.989" e_score="0.992"/>
          <exon-intron don_prob="0.957" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.811" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.001" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="11941" e_stop="11981" e_length="41"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.963">
            <gDNA_intron_boundary i_start="11982" i_stop="12079" i_length="98"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="12080" e_stop="12197" e_length="118"/>
          </exon>
          <intron i_serial="2" don_prob="0.507" acc_prob="0.958">
            <gDNA_intron_boundary i_start="12198" i_stop="13078" i_length="881"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="13079" e_stop="13149" e_length="71"/>
          </exon>
          <intron i_serial="3" don_prob="0.303" acc_prob="0.969">
            <gDNA_intron_boundary i_start="13150" i_stop="13976" i_length="827"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="13977" e_stop="14033" e_length="57"/>
          </exon>
          <intron i_serial="4" don_prob="0.805" acc_prob="0.988">
            <gDNA_intron_boundary i_start="14034" i_stop="14179" i_length="146"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="14180" e_stop="14271" e_length="92"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.997">
            <gDNA_intron_boundary i_start="14272" i_stop="15041" i_length="770"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="15042" e_stop="15089" e_length="48"/>
          </exon>
          <intron i_serial="6" don_prob="0.993" acc_prob="0.760">
            <gDNA_intron_boundary i_start="15090" i_stop="15594" i_length="505"/>
          </intron>
          <exon e_serial="7" e_score="0.992">
            <gDNA_exon_boundary e_start="15595" e_stop="15715" e_length="121"/>
          </exon>
          <intron i_serial="7" don_prob="0.942" acc_prob="0.989">
            <gDNA_intron_boundary i_start="15716" i_stop="15804" i_length="89"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="15805" e_stop="15851" e_length="47"/>
          </exon>
          <intron i_serial="8" don_prob="0.957" acc_prob="0.993">
            <gDNA_intron_boundary i_start="15852" i_stop="16911" i_length="1060"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="16912" e_stop="16993" e_length="82"/>
          </exon>
          <intron i_serial="9" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="16994" i_stop="18715" i_length="1722"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="18716" e_stop="18792" e_length="77"/>
          </exon>
          <intron i_serial="10" don_prob="0.997" acc_prob="0.811">
            <gDNA_intron_boundary i_start="18793" i_stop="18935" i_length="143"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="18936" e_stop="19055" e_length="120"/>
          </exon>
          <intron i_serial="11" don_prob="0.999" acc_prob="0.979">
            <gDNA_intron_boundary i_start="19056" i_stop="19332" i_length="277"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="19333" e_stop="19407" e_length="75"/>
          </exon>
          <intron i_serial="12" don_prob="0.985" acc_prob="0.001">
            <gDNA_intron_boundary i_start="19408" i_stop="19494" i_length="87"/>
          </intron>
          <exon e_serial="13" e_score="0.995">
            <gDNA_exon_boundary e_start="19495" e_stop="20096" e_length="602"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11941" stop="11981"/>
              <exon start="12080" stop="12197"/>
              <exon start="13079" stop="13149"/>
              <exon start="13977" stop="14033"/>
              <exon start="14180" stop="14271"/>
              <exon start="15042" stop="15089"/>
              <exon start="15595" stop="15715"/>
              <exon start="15805" stop="15851"/>
              <exon start="16912" stop="16993"/>
              <exon start="18716" stop="18792"/>
              <exon start="18936" stop="19055"/>
              <exon start="19333" stop="19407"/>
              <exon start="19495" stop="20096"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U320790" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCAATAATCTCTTCATTTCTCTCACTCCATCATGGACTTCG : GTGTCTATGTTGATCGGATTTTTTCTCTATTTAGCTACCGTTGGATCTATTCTACCCGGAAAACTTGTTCCTGGGGCGACTTTATCTGATGGAACTCGACTCCATTATCGTTGCAATG : GTTTATTATCACTTCTGTTGTTGGTTTTGCTTCTTGGAGTTGGGTCGCAGATGAATCTTGTTTCACCTACT : GCTATAGCAGATAGAGGACTTGAGCTTTTGTCCACAACACTTATCTTTAGTGTTCTT : GTGACATTGATGCTTTATTTGGTTGGCCTGAACTCACGTGCAAAGAGTTCATCACTGAAACCTCATGTCTCAGGAAATCTAATCCATGACTG : GTGGTTTGGGATACAACTGAATCCTGAATTCATGGGCATTGATCTCAA : ATTTTTCTTTGTTAGAGCTGGTATGATGGGATGGTTACTTATCAATCTTTCAGTTCTTGCAAAATGTGTTGTAGAGGCTAAATTGAGCCAATCAATGATTCTCTACCAGCTATTTTGTGGG : CTCTACATCCTTGACTACTTCTTCTATGAAGAGTTCATGACCTCCAC : ATGGGATATAATAGCAGAGAGGTTGGGCTACATGCTGGTTTTTGGTGATCTAGTCTTTATACCGTTCACCTTCAGTATTCAG : GGTTGGTGGCTTTTGAGTAACAAAGTGGAGCTAACAACAGCAGCAATAATTGCCAATTGCCTCGTCTTTCTTATTGG : GTACTCGGTGTTCAGAGGAGCCAATAAGCAGAAGCATGTATTTAAAAAGGATCCCAAGGCACCCATATGGGGTAGTCCTCCAAAAGTTATTGGGGGAAAGTTGCTTGCTTCTGGCTATTG : GGGCATTGCACGGCACTGTAATTACCTCGGGGATTTGTTGCTGGCATCGTCTTTTAGTTTACCTTGTGGTATAAG : CTCTGTGGTTCCATACTTTTACCCCATATATCTTCTCATTCTACTCATATGGAGGGAGAGAAGGGACGAAGCTAGATGTGCAGAGAAGTACAAAGATGTGTGGGCTGAATACCGTAAACTTGTTCCTTACAGGATCTTACCTTACGTTTACTAGCTCAATCGTTTGTCCACGTTGCTTGTGCATTAGAGTCAGAATTAGCCTCACTGTACCGCACTACCCAAGCATGAGAAGGGACGAACTCATGAATGAATATTACATCAAATTCGAGCTTTTGCCCTATCTATGCAGCTTTCTCATCTCCTCTACGAAAGTAATCTTTTAATCTATTTCAGTTAGGATCAACACTGTATCCAGGTTGTAACTGATTGCTTAGCTTTTGAAAGTTTTTCCAGAACCAACTTGTACACTAGATGTACTTTATCATGGCAGGATTTAAATGTGCTGCTTGTATTGAATGCCAACTATGGAATTATTTTTCATGGTTTGTAATCTTGGAGCAGCTTACTAATGTGTGCTGAAATTTTCGAATGATTTTCCCGACTTTCTAGTTTTTTGTATGCACCTTGACTAATTTCAGGAGATATTTGCTACGTTCCACCAG</gDNA_template>
            <first_frame> S  I  I  S  S  F  L  S  L  H  H  G  L  R :   C  L  C  *  S  D  F  F  S  I  *  L  P  L  D  L  F  Y  P  E  N  L  F  L  G  R  L  Y  L  M  E  L  D  S  I  I  V  A  M  :  V  Y  Y  H  F  C  C  W  F  C  F  L  E  L  G  R  R  *  I  L  F  H  L  L :   L  *  Q  I  E  D  L  S  F  C  P  Q  H  L  S  L  V  F  L :   *  H  *  C  F  I  W  L  A  *  T  H  V  Q  R  V  H  H  *  N  L  M  S  Q  E  I  *  S  M  T   : G  G  L  G  Y  N  *  I  L  N  S  W  A  L  I  S   : N  F  S  L  L  E  L  V  *  W  D  G  Y  L  S  I  F  Q  F  L  Q  N  V  L  *  R  L  N  *  A  N  Q  *  F  S  T  S  Y  F  V  G :   S  T  S  L  T  T  S  S  M  K  S  S  *  P  P   : H  G  I  *  *  Q  R  G  W  A  T  C  W  F  L  V  I  *  S  L  Y  R  S  P  S  V  F  R :   V  G  G  F  *  V  T  K  W  S  *  Q  Q  Q  Q  *  L  P  I  A  S  S  F  L  L   : G  T  R  C  S  E  E  P  I  S  R  S  M  Y  L  K  R  I  P  R  H  P  Y  G  V  V  L  Q  K  L  L  G  E  S  C  L  L  L  A  I   : G  A  L  H  G  T  V  I  T  S  G  I  C  C  W  H  R  L  L  V  Y  L  V  V  *   : A  L  W  F  H  T  F  T  P  Y  I  F  S  F  Y  S  Y  G  G  R  E  G  T  K  L  D  V  Q  R  S  T  K  M  C  G  L  N  T  V  N  L  F  L  T  G  S  Y  L  T  F  T  S  S  I  V  C  P  R  C  L  C  I  R  V  R  I  S  L  T  V  P  H  Y  P  S  M  R  R  D  E  L  M  N  E  Y  Y  I  K  F  E  L  L  P  Y  L  C  S  F  L  I  S  S  T  K  V  I  F  *  S  I  S  V  R  I  N  T  V  S  R  L  *  L  I  A  *  L  L  K  V  F  P  E  P  T  C  T  L  D  V  L  Y  H  G  R  I  *  M  C  C  L  Y  *  M  P  T  M  E  L  F  F  M  V  C  N  L  G  A  A  Y  *  C  V  L  K  F  S  N  D  F  P  D  F  L  V  F  C  M  H  L  D  *  F  Q  E  I  F  A  T  F  H  Q </first_frame>
            <second_frame>  Q  *  S  L  H  F  S  H  S  I  M  D  F   : G  V  Y  V  D  R  I  F  S  L  F  S  Y  R  W  I  Y  S  T  R  K  T  C  S  W  G  D  F  I  *  W  N  S  T  P  L  S  L  Q  W :   F  I  I  T  S  V  V  G  F  A  S  W  S  W  V  A  D  E  S  C  F  T  Y   : C  Y  S  R  *  R  T  *  A  F  V  H  N  T  Y  L  *  C  S   : C  D  I  D  A  L  F  G  W  P  E  L  T  C  K  E  F  I  T  E  T  S  C  L  R  K  S  N  P  *  L  :  V  V  W  D  T  T  E  S  *  I  H  G  H  *  S  Q  :  I  F  L  C  *  S  W  Y  D  G  M  V  T  Y  Q  S  F  S  S  C  K  M  C  C  R  G  *  I  E  P  I  N  D  S  L  P  A  I  L  W   : A  L  H  P  *  L  L  L  L  *  R  V  H  D  L  H  :  M  G  Y  N  S  R  E  V  G  L  H  A  G  F  W  *  S  S  L  Y  T  V  H  L  Q  Y  S   : G  L  V  A  F  E  *  Q  S  G  A  N  N  S  S  N  N  C  Q  L  P  R  L  S  Y  W  :  V  L  G  V  Q  R  S  Q  *  A  E  A  C  I  *  K  G  S  Q  G  T  H  M  G  *  S  S  K  S  Y  W  G  K  V  A  C  F  W  L  L  :  G  H  C  T  A  L  *  L  P  R  G  F  V  A  G  I  V  F  *  F  T  L  W  Y  K  :  L  C  G  S  I  L  L  P  H  I  S  S  H  S  T  H  M  E  G  E  K  G  R  S  *  M  C  R  E  V  Q  R  C  V  G  *  I  P  *  T  C  S  L  Q  D  L  T  L  R  L  L  A  Q  S  F  V  H  V  A  C  A  L  E  S  E  L  A  S  L  Y  R  T  T  Q  A  *  E  G  T  N  S  *  M  N  I  T  S  N  S  S  F  C  P  I  Y  A  A  F  S  S  P  L  R  K  *  S  F  N  L  F  Q  L  G  S  T  L  Y  P  G  C  N  *  L  L  S  F  *  K  F  F  Q  N  Q  L  V  H  *  M  Y  F  I  M  A  G  F  K  C  A  A  C  I  E  C  Q  L  W  N  Y  F  S  W  F  V  I  L  E  Q  L  T  N  V  C  *  N  F  R  M  I  F  P  T  F  *  F  F  V  C  T  L  T  N  F  R  R  Y  L  L  R  S  T   </second_frame>
            <third_frame>   N  N  L  F  I  S  L  T  P  S  W  T  S  :  V  S  M  L  I  G  F  F  L  Y  L  A  T  V  G  S  I  L  P  G  K  L  V  P  G  A  T  L  S  D  G  T  R  L  H  Y  R  C  N   : G  L  L  S  L  L  L  L  V  L  L  L  G  V  G  S  Q  M  N  L  V  S  P  T  :  A  I  A  D  R  G  L  E  L  L  S  T  T  L  I  F  S  V  L  :  V  T  L  M  L  Y  L  V  G  L  N  S  R  A  K  S  S  S  L  K  P  H  V  S  G  N  L  I  H  D  W :   W  F  G  I  Q  L  N  P  E  F  M  G  I  D  L  K :   F  F  F  V  R  A  G  M  M  G  W  L  L  I  N  L  S  V  L  A  K  C  V  V  E  A  K  L  S  Q  S  M  I  L  Y  Q  L  F  C  G  :  L  Y  I  L  D  Y  F  F  Y  E  E  F  M  T  S  T :   W  D  I  I  A  E  R  L  G  Y  M  L  V  F  G  D  L  V  F  I  P  F  T  F  S  I  Q  :  G  W  W  L  L  S  N  K  V  E  L  T  T  A  A  I  I  A  N  C  L  V  F  L  I  G :   Y  S  V  F  R  G  A  N  K  Q  K  H  V  F  K  K  D  P  K  A  P  I  W  G  S  P  P  K  V  I  G  G  K  L  L  A  S  G  Y  W :   G  I  A  R  H  C  N  Y  L  G  D  L  L  L  A  S  S  F  S  L  P  C  G  I  S :   S  V  V  P  Y  F  Y  P  I  Y  L  L  I  L  L  I  W  R  E  R  R  D  E  A  R  C  A  E  K  Y  K  D  V  W  A  E  Y  R  K  L  V  P  Y  R  I  L  P  Y  V  Y  *  L  N  R  L  S  T  L  L  V  H  *  S  Q  N  *  P  H  C  T  A  L  P  K  H  E  K  G  R  T  H  E  *  I  L  H  Q  I  R  A  F  A  L  S  M  Q  L  S  H  L  L  Y  E  S  N  L  L  I  Y  F  S  *  D  Q  H  C  I  Q  V  V  T  D  C  L  A  F  E  S  F  S  R  T  N  L  Y  T  R  C  T  L  S  W  Q  D  L  N  V  L  L  V  L  N  A  N  Y  G  I  I  F  H  G  L  *  S  W  S  S  L  L  M  C  A  E  I  F  E  *  F  S  R  L  S  S  F  L  Y  A  P  *  L  I  S  G  D  I  C  Y  V  P  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0100J12.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="11943" stop="11981"/>
                    <exon start="12080" stop="12197"/>
                    <exon start="13079" stop="13149"/>
                    <exon start="13977" stop="14033"/>
                    <exon start="14180" stop="14271"/>
                    <exon start="15042" stop="15089"/>
                    <exon start="15595" stop="15715"/>
                    <exon start="15805" stop="15851"/>
                    <exon start="16912" stop="16993"/>
                    <exon start="18716" stop="18792"/>
                    <exon start="18936" stop="19055"/>
                    <exon start="19333" stop="19407"/>
                    <exon start="19495" stop="19648"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1098</number_coding_nucleotides>
                  <number_encoded_amino_acids>366</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NNLFISLTPSWTSVSMLIGFFLYLATVGSILPGKLVPGATLSDGTRLHYRCNGLLSLLLLVLLLGVGSQMNLVSPTAIADRGLELLSTTLIFSVLVTLMLYLVGLNSRAKSSSLKPHVSGNLIHDWWFGIQLNPEFMGIDLKFFFVRAGMMGWLLINLSVLAKCVVEAKLSQSMILYQLFCGLYILDYFFYEEFMTSTWDIIAERLGYMLVFGDLVFIPFTFSIQGWWLLSNKVELTTAAIIANCLVFLIGYSVFRGANKQKHVFKKDPKAPIWGSPPKVIGGKLLASGYWGIARHCNYLGDLLLASSFSLPCGISSVVPYFYPIYLLILLIWRERRDEARCAEKYKDVWAEYRKLVPYRILPYVY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="40571" PGL_stop="43125"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="40571" e_stop="40698"/>
            <exon e_start="40823" e_stop="40902"/>
            <exon e_start="40989" e_stop="41073"/>
            <exon e_start="41154" e_stop="41245"/>
            <exon e_start="41321" e_stop="41389"/>
            <exon e_start="41687" e_stop="41723"/>
            <exon e_start="41807" e_stop="41889"/>
            <exon e_start="42333" e_stop="42797"/>
            <exon e_start="42925" e_stop="42961"/>
            <exon e_start="43082" e_stop="43125"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.973" acc_prob="0.871" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.949" e_score="1.000"/>
          <exon-intron don_prob="0.945" acc_prob="0.839" e_score="1.000"/>
          <exon-intron don_prob="0.979" acc_prob="0.963" e_score="1.000"/>
          <exon-intron don_prob="0.964" acc_prob="0.889" e_score="1.000"/>
          <exon-intron don_prob="0.974" acc_prob="0.470" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.791" acc_prob="0.975" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="40571" e_stop="40698" e_length="128"/>
          </exon>
          <intron i_serial="1" don_prob="0.973" acc_prob="0.871">
            <gDNA_intron_boundary i_start="40699" i_stop="40822" i_length="124"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="40823" e_stop="40902" e_length="80"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.949">
            <gDNA_intron_boundary i_start="40903" i_stop="40988" i_length="86"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="40989" e_stop="41073" e_length="85"/>
          </exon>
          <intron i_serial="3" don_prob="0.945" acc_prob="0.839">
            <gDNA_intron_boundary i_start="41074" i_stop="41153" i_length="80"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="41154" e_stop="41245" e_length="92"/>
          </exon>
          <intron i_serial="4" don_prob="0.979" acc_prob="0.963">
            <gDNA_intron_boundary i_start="41246" i_stop="41320" i_length="75"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="41321" e_stop="41389" e_length="69"/>
          </exon>
          <intron i_serial="5" don_prob="0.964" acc_prob="0.889">
            <gDNA_intron_boundary i_start="41390" i_stop="41686" i_length="297"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="41687" e_stop="41723" e_length="37"/>
          </exon>
          <intron i_serial="6" don_prob="0.974" acc_prob="0.470">
            <gDNA_intron_boundary i_start="41724" i_stop="41806" i_length="83"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="41807" e_stop="41889" e_length="83"/>
          </exon>
          <intron i_serial="7" don_prob="0.983" acc_prob="0.999">
            <gDNA_intron_boundary i_start="41890" i_stop="42332" i_length="443"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="42333" e_stop="42797" e_length="465"/>
          </exon>
          <intron i_serial="8" don_prob="0.791" acc_prob="0.975">
            <gDNA_intron_boundary i_start="42798" i_stop="42924" i_length="127"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="42925" e_stop="42961" e_length="37"/>
          </exon>
          <intron i_serial="9" don_prob="0.999" acc_prob="0.997">
            <gDNA_intron_boundary i_start="42962" i_stop="43081" i_length="120"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="43082" e_stop="43125" e_length="44"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40571" stop="40698"/>
              <exon start="40823" stop="40902"/>
              <exon start="40989" stop="41073"/>
              <exon start="41154" stop="41245"/>
              <exon start="41321" stop="41389"/>
              <exon start="41687" stop="41723"/>
              <exon start="41807" stop="41889"/>
              <exon start="42333" stop="42797"/>
              <exon start="42925" stop="42961"/>
              <exon start="43082" stop="43125"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U319729" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAGAGAAAAGACAGCAAACACAATGGATTCACTAGACTGGGACGCAGTGAGGTGTGCAGATGTCAATGAGATATCCCATACCATTAGAGAACGGGGGATGAACAATATGCTAGCAGAGAGAATCAAG : GATTTCCTTAATCGGATTTTTAGAGAACATGGAAGTATTGATCTTGAATGGCTGAGAGACGTTCCACCAGACAAAGCAAA : AGAGTATCTACTAAGCATCAGGGGCTTGGGCCTGAAGAGCGTAGAGTGTGTGCGACTTTTAACACTTCACAACCTTGCTTTTCCG : GTCGACACAAATGTTGGGCGTATAGCTGTTAGACTGGGATGGGTGCCCCTGCAGCCACTGCCAGAGTCACTACAATTGCATCTTCTGGAATT : GTACCCTGTGCTGGAGTCAATTCAAAAATACCTCTGGCCACGTCTCTGCAAGCTTGATCAAAGAACATT : ATATGAGTTGCATTACCATATGATCACTTTTGGAAAG : GTCTTCTGTTCAAAAAGCAAACCCAACTGCAACGCATGTCCAATGAGAGGAGAATGCAGACACTTCGCAAGTGCTTTTGCAAG : CGCAAGGCTTGCCCTGCCAGCACCAGAAGAGAAAAGTATAGTGAGTGCAACAGAGAACAATGCAGCTGACCAGAATCCATTCCAGAACTTCAATCAACAGCCGCTAACCTTACCCCAGGCTAATCAAACACCTTTAGAGCATCCCAAATTGATCAACTCCGCACCTATTATTGAGGTGCCAGCAACACCACAGCCCATTGTCGAAGAGCCTGCCTCACCTGAGCCAGAGCAAGATGCTCCCGAAATCGACATTGAAGATGTTTGCTTTGAAGATCCTGATGAAATTCCTACAATTGAATTGAATATGGCGCAGTTCACTCAAAATGTGAAGAACTTTGTGCAAAACAATATGGAGCTTCAACAGGTCGAAATGTCAAAAGCCTTAGTAGCTTTAACTCCAGCAGCTGCTTCAATTCCTACACCTAAACTTAAGCATATAAGCCGGCTCAGAACTGAACATCAAGT : ATATGAACTTCCAGATTCTCATCCTCTTCTTGAAGGG : TTCGAGAAAAGAGAACCAGATGATCCATCCTCCTATCTTCTGGC</gDNA_template>
            <first_frame> K  E  K  R  Q  Q  T  Q  W  I  H  *  T  G  T  Q  *  G  V  Q  M  S  M  R  Y  P  I  P  L  E  N  G  G  *  T  I  C  *  Q  R  E  S  R :   I  S  L  I  G  F  L  E  N  M  E  V  L  I  L  N  G  *  E  T  F  H  Q  T  K  Q   : K  S  I  Y  *  A  S  G  A  W  A  *  R  A  *  S  V  C  D  F  *  H  F  T  T  L  L  F  R :   S  T  Q  M  L  G  V  *  L  L  D  W  D  G  C  P  C  S  H  C  Q  S  H  Y  N  C  I  F  W  N   : C  T  L  C  W  S  Q  F  K  N  T  S  G  H  V  S  A  S  L  I  K  E  H   : Y  M  S  C  I  T  I  *  S  L  L  E  R :   S  S  V  Q  K  A  N  P  T  A  T  H  V  Q  *  E  E  N  A  D  T  S  Q  V  L  L  Q   : A  Q  G  L  P  C  Q  H  Q  K  R  K  V  *  *  V  Q  Q  R  T  M  Q  L  T  R  I  H  S  R  T  S  I  N  S  R  *  P  Y  P  R  L  I  K  H  L  *  S  I  P  N  *  S  T  P  H  L  L  L  R  C  Q  Q  H  H  S  P  L  S  K  S  L  P  H  L  S  Q  S  K  M  L  P  K  S  T  L  K  M  F  A  L  K  I  L  M  K  F  L  Q  L  N  *  I  W  R  S  S  L  K  M  *  R  T  L  C  K  T  I  W  S  F  N  R  S  K  C  Q  K  P  *  *  L  *  L  Q  Q  L  L  Q  F  L  H  L  N  L  S  I  *  A  G  S  E  L  N  I  K   : Y  M  N  F  Q  I  L  I  L  F  L  K  G :   S  R  K  E  N  Q  M  I  H  P  P  I  F  W  </first_frame>
            <second_frame>  K  R  K  D  S  K  H  N  G  F  T  R  L  G  R  S  E  V  C  R  C  Q  *  D  I  P  Y  H  *  R  T  G  D  E  Q  Y  A  S  R  E  N  Q   : G  F  P  *  S  D  F  *  R  T  W  K  Y  *  S  *  M  A  E  R  R  S  T  R  Q  S  K  :  R  V  S  T  K  H  Q  G  L  G  P  E  E  R  R  V  C  A  T  F  N  T  S  Q  P  C  F  S   : G  R  H  K  C  W  A  Y  S  C  *  T  G  M  G  A  P  A  A  T  A  R  V  T  T  I  A  S  S  G  I  :  V  P  C  A  G  V  N  S  K  I  P  L  A  T  S  L  Q  A  *  S  K  N  I  :  I  *  V  A  L  P  Y  D  H  F  W  K   : G  L  L  F  K  K  Q  T  Q  L  Q  R  M  S  N  E  R  R  M  Q  T  L  R  K  C  F  C  K  :  R  K  A  C  P  A  S  T  R  R  E  K  Y  S  E  C  N  R  E  Q  C  S  *  P  E  S  I  P  E  L  Q  S  T  A  A  N  L  T  P  G  *  S  N  T  F  R  A  S  Q  I  D  Q  L  R  T  Y  Y  *  G  A  S  N  T  T  A  H  C  R  R  A  C  L  T  *  A  R  A  R  C  S  R  N  R  H  *  R  C  L  L  *  R  S  *  *  N  S  Y  N  *  I  E  Y  G  A  V  H  S  K  C  E  E  L  C  A  K  Q  Y  G  A  S  T  G  R  N  V  K  S  L  S  S  F  N  S  S  S  C  F  N  S  Y  T  *  T  *  A  Y  K  P  A  Q  N  *  T  S  S  :  I  *  T  S  R  F  S  S  S  S  *  R   : V  R  E  K  R  T  R  *  S  I  L  L  S  S  G </second_frame>
            <third_frame>   R  E  K  T  A  N  T  M  D  S  L  D  W  D  A  V  R  C  A  D  V  N  E  I  S  H  T  I  R  E  R  G  M  N  N  M  L  A  E  R  I  K  :  D  F  L  N  R  I  F  R  E  H  G  S  I  D  L  E  W  L  R  D  V  P  P  D  K  A  K :   E  Y  L  L  S  I  R  G  L  G  L  K  S  V  E  C  V  R  L  L  T  L  H  N  L  A  F  P  :  V  D  T  N  V  G  R  I  A  V  R  L  G  W  V  P  L  Q  P  L  P  E  S  L  Q  L  H  L  L  E  L :   Y  P  V  L  E  S  I  Q  K  Y  L  W  P  R  L  C  K  L  D  Q  R  T  L :   Y  E  L  H  Y  H  M  I  T  F  G  K  :  V  F  C  S  K  S  K  P  N  C  N  A  C  P  M  R  G  E  C  R  H  F  A  S  A  F  A  S :   A  R  L  A  L  P  A  P  E  E  K  S  I  V  S  A  T  E  N  N  A  A  D  Q  N  P  F  Q  N  F  N  Q  Q  P  L  T  L  P  Q  A  N  Q  T  P  L  E  H  P  K  L  I  N  S  A  P  I  I  E  V  P  A  T  P  Q  P  I  V  E  E  P  A  S  P  E  P  E  Q  D  A  P  E  I  D  I  E  D  V  C  F  E  D  P  D  E  I  P  T  I  E  L  N  M  A  Q  F  T  Q  N  V  K  N  F  V  Q  N  N  M  E  L  Q  Q  V  E  M  S  K  A  L  V  A  L  T  P  A  A  A  S  I  P  T  P  K  L  K  H  I  S  R  L  R  T  E  H  Q  V :   Y  E  L  P  D  S  H  P  L  L  E  G  :  F  E  K  R  E  P  D  D  P  S  S  Y  L  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0100J12.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="40573" stop="40698"/>
                    <exon start="40823" stop="40902"/>
                    <exon start="40989" stop="41073"/>
                    <exon start="41154" stop="41245"/>
                    <exon start="41321" stop="41389"/>
                    <exon start="41687" stop="41723"/>
                    <exon start="41807" stop="41889"/>
                    <exon start="42333" stop="42797"/>
                    <exon start="42925" stop="42961"/>
                    <exon start="43082" stop="43123"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1116</number_coding_nucleotides>
                  <number_encoded_amino_acids>372</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>REKTANTMDSLDWDAVRCADVNEISHTIRERGMNNMLAERIKDFLNRIFREHGSIDLEWLRDVPPDKAKEYLLSIRGLGLKSVECVRLLTLHNLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYPVLESIQKYLWPRLCKLDQRTLYELHYHMITFGKVFCSKSKPNCNACPMRGECRHFASAFASARLALPAPEEKSIVSATENNAADQNPFQNFNQQPLTLPQANQTPLEHPKLINSAPIIEVPATPQPIVEEPASPEPEQDAPEIDIEDVCFEDPDEIPTIELNMAQFTQNVKNFVQNNMELQQVEMSKALVALTPAAASIPTPKLKHISRLRTEHQVYELPDSHPLLEGFEKREPDDPSSYLL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="52730" PGL_stop="68281"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="52730" e_stop="53870"/>
            <exon e_start="59632" e_stop="59933"/>
            <exon e_start="60021" e_stop="60165"/>
            <exon e_start="60419" e_stop="60522"/>
            <exon e_start="61786" e_stop="61994"/>
            <exon e_start="64000" e_stop="64117"/>
            <exon e_start="64206" e_stop="64411"/>
            <exon e_start="64552" e_stop="64592"/>
            <exon e_start="64888" e_stop="64956"/>
            <exon e_start="65100" e_stop="65200"/>
            <exon e_start="65284" e_stop="65368"/>
            <exon e_start="65443" e_stop="65541"/>
            <exon e_start="66364" e_stop="66432"/>
            <exon e_start="66532" e_stop="66663"/>
            <exon e_start="67434" e_stop="67528"/>
            <exon e_start="67617" e_stop="67819"/>
            <exon e_start="68042" e_stop="68281"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.983" e_score="0.996"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.925" acc_prob="0.999" e_score="0.993"/>
          <exon-intron don_prob="0.939" acc_prob="0.678" e_score="1.000"/>
          <exon-intron don_prob="0.969" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.805" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.956" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.353" acc_prob="0.415" e_score="1.000"/>
          <exon-intron don_prob="0.570" acc_prob="0.989" e_score="0.988"/>
          <exon-intron don_prob="0.992" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.977" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.710" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.955" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="52730" e_stop="53870" e_length="1141"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.983">
            <gDNA_intron_boundary i_start="53871" i_stop="59631" i_length="5761"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="59632" e_stop="59933" e_length="302"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="59934" i_stop="60020" i_length="87"/>
          </intron>
          <exon e_serial="3" e_score="0.993">
            <gDNA_exon_boundary e_start="60021" e_stop="60165" e_length="145"/>
          </exon>
          <intron i_serial="3" don_prob="0.925" acc_prob="0.999">
            <gDNA_intron_boundary i_start="60166" i_stop="60418" i_length="253"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="60419" e_stop="60522" e_length="104"/>
          </exon>
          <intron i_serial="4" don_prob="0.939" acc_prob="0.678">
            <gDNA_intron_boundary i_start="60523" i_stop="61785" i_length="1263"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="61786" e_stop="61994" e_length="209"/>
          </exon>
          <intron i_serial="5" don_prob="0.969" acc_prob="0.997">
            <gDNA_intron_boundary i_start="61995" i_stop="63999" i_length="2005"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="64000" e_stop="64117" e_length="118"/>
          </exon>
          <intron i_serial="6" don_prob="0.991" acc_prob="0.805">
            <gDNA_intron_boundary i_start="64118" i_stop="64205" i_length="88"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="64206" e_stop="64411" e_length="206"/>
          </exon>
          <intron i_serial="7" don_prob="0.991" acc_prob="0.956">
            <gDNA_intron_boundary i_start="64412" i_stop="64551" i_length="140"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="64552" e_stop="64592" e_length="41"/>
          </exon>
          <intron i_serial="8" don_prob="0.997" acc_prob="0.992">
            <gDNA_intron_boundary i_start="64593" i_stop="64887" i_length="295"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="64888" e_stop="64956" e_length="69"/>
          </exon>
          <intron i_serial="9" don_prob="0.991" acc_prob="0.989">
            <gDNA_intron_boundary i_start="64957" i_stop="65099" i_length="143"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="65100" e_stop="65200" e_length="101"/>
          </exon>
          <intron i_serial="10" don_prob="0.353" acc_prob="0.415">
            <gDNA_intron_boundary i_start="65201" i_stop="65283" i_length="83"/>
          </intron>
          <exon e_serial="11" e_score="0.988">
            <gDNA_exon_boundary e_start="65284" e_stop="65368" e_length="85"/>
          </exon>
          <intron i_serial="11" don_prob="0.570" acc_prob="0.989">
            <gDNA_intron_boundary i_start="65369" i_stop="65442" i_length="74"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="65443" e_stop="65541" e_length="99"/>
          </exon>
          <intron i_serial="12" don_prob="0.992" acc_prob="0.000">
            <gDNA_intron_boundary i_start="65542" i_stop="66363" i_length="822"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="66364" e_stop="66432" e_length="69"/>
          </exon>
          <intron i_serial="13" don_prob="0.977" acc_prob="0.999">
            <gDNA_intron_boundary i_start="66433" i_stop="66531" i_length="99"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="66532" e_stop="66663" e_length="132"/>
          </exon>
          <intron i_serial="14" don_prob="0.710" acc_prob="0.999">
            <gDNA_intron_boundary i_start="66664" i_stop="67433" i_length="770"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="67434" e_stop="67528" e_length="95"/>
          </exon>
          <intron i_serial="15" don_prob="0.955" acc_prob="0.999">
            <gDNA_intron_boundary i_start="67529" i_stop="67616" i_length="88"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="67617" e_stop="67819" e_length="203"/>
          </exon>
          <intron i_serial="16" don_prob="0.994" acc_prob="0.999">
            <gDNA_intron_boundary i_start="67820" i_stop="68041" i_length="222"/>
          </intron>
          <exon e_serial="17" e_score="0.996">
            <gDNA_exon_boundary e_start="68042" e_stop="68281" e_length="240"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52730" stop="53870"/>
              <exon start="59632" stop="59933"/>
              <exon start="60021" stop="60165"/>
              <exon start="60419" stop="60522"/>
              <exon start="61786" stop="61994"/>
              <exon start="64000" stop="64117"/>
              <exon start="64206" stop="64411"/>
              <exon start="64552" stop="64592"/>
              <exon start="64888" stop="64956"/>
              <exon start="65100" stop="65200"/>
              <exon start="65284" stop="65368"/>
              <exon start="65443" stop="65541"/>
              <exon start="66364" stop="66432"/>
              <exon start="66532" stop="66663"/>
              <exon start="67434" stop="67528"/>
              <exon start="67617" stop="67819"/>
              <exon start="68042" stop="68281"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U316110" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGCTTATAAACGAATCAAATTAATATACACATACTTTTCTGACATATTTATACATTTAATAAAATATCCGATGTGCTTTTAAGTCAAGTGCTTACTGTTCTTATGAACTCAAATCAGTCAAAAGTCATAAGTTTATCATCTCTAAGTCGTAATTTTTCAGCTTATAAGCATTTTTGGATTGATCGGAAACGGAAGAAAGTGAGGCCAAATGGGTTGTAAGAGTAATACTTGAAATTATATAGGGAATCATTTGAAATATGATAAAAGTAGAGGGGAGTTTAATATAATTAAGTTAAACTTATAACTTAAAGTCGAAAATTCCAGGAATATTACGACTAAAACAAGACTTCCCCCATCTTTTTTTTCTCTCACTTCTCATTCGACAAGTACGAAGAAGAAGAAGAAAAGAGAGAAAACTTTTAGTGAGAGAAAGTCTTTGAGAGAGAGAGGGAGTTGAAGCTATAGTGTAATGAACAATTTCTAGCTAGGGTTTTGTTGAATTGATAAATTATTGAGATGGAAATGTCTACTAGACGATCGAATTATACTTTGTTGAGTCAAGTTGCAGATGACAATTACCTTCCTCCGCCACCGAAGTACTCCGTCACTGGCGGTGGCGGTGGAGGTGGAGGAGTAGCACCGTATTATGAGTCTCATTCTGGTGAAAAGGGTAAAGGCAAAACAGGTGATAATAGAGGATTTGATTGGGATTTGAGTGATCACCGTAGTAATATGATGCAAGCGTCGAATCGGATCGGTGCGGCGGCATTTCCAGGTTCGATTGGCTTGCAGAGGCAATCAAGTGGGAGCAGCTTTGGTGAAAGTTCGATCTCCGGGGAGTATTACATGCCGTCGTTGTCTAATGCGGAGGCGTCATTTGGATATCTCAATGATGGCGGTGGCGGTGCTGAAGTGAGGATGAAGCCGTTGGAAGCTAATTTGTTCGGTGGCTCGTCTTCTAAGAGCTGGGCGCAGCAGACTGAGGAGAGTTATCAGCTGCAGTTAGCTTTGGCTTTACGGCTTTCTTCCGAAGCTACCTGTGCTGATGATCCAAATTTTTTGGATCATGTGCCTGATGAATCCGCATCCCGTGCTTCAGCTTCAGCTGCTTCGGCGGAGACCCTTTCCCATCGATTCTGG : GTAAATGGATGCTTGTCGTACTTTGACAAAGTGCCTGATGGATTTTACTTGATCCATGGGATGGATCCATATGTCTGGATTGTCTGCTCAGATCTACAAGAAAATGCCCGGGTTCCATCTATTGAATCAATGAGAGCTGTTGATCCCTCTGTAGTACCATCAGTTGAAGTGATTTTGATTGATCGGCGTACGGATCCAAGCTTGAAAGAACTGCAGAATCGGATCCATAGTCTCTCTCCTACTTGTGGCACAACAAAAGAAGTTGTTGATCAGCTTGCTCAGCTGGTCTGCAGTCATATGGG : GGGCGCAACTTCTGCCGGAGAAGATGAGTTGGTTCCTTTGTGGAAGGAGTGTAGTTATGAGCTGAAGGATTGTCTAGGATCCACTGTGCTTCCCATTGGTAGCCTGTCTGTTGGCCTTTGCAGGCATCGAGCTTTGCTATTTAAA : GTTCTAGCTGACGCCATTGGTTTACCATGTCGAATTGCCAAAGGATGTAAATATTGTAACAGAGCTGATGCTTCCTCATGTTTAGTTCGTTTTGGACCTGACAG : GGAGTACCTGGTTGATTTGATTGGGAGCCCTGGATGCTTATGCGAACCAGATTCCTCGCTCAACGGCCCATCTTCTATCTCAATCTCTTCACCATTGCGATTTCCGAGATTCAGAGAAGTTGAACCGACAACTGATTTCAGGTCACTTGCCAAACAGTATTTCTCGGATTGTCAATCGCTTAATCTTGTGTTTGAGGAATCTTCAGCAG : GAGCTGCTGTTGATGGAGACGCAGGACAAACTGACCGAAATAACATTGAGAGAAACAGTGCTGTCACTGGTCCAAGTAACCGTGATGAAGTTTCTCGGTTACCTGTGCCTGCAATTAG : GGACATGGCTCCTGTGAAGTATGTCCGTCCAGTTTTGCATGGAGATACACAATTATCAGACCCAAGAGATATAGGGAATGATATGCGATTTCTTGAGAGAGGAAGTCAACTTGTTCCCTCTAAAATAAGTAGAGACATTGCCCTTGAAATAGAAGATTTTGATATACCCTGGGAAGATCTTGTTCTGAAGGAGAGGATTGGGGCAG : GGTCTTTTGGTACTGTTCACCGTGCTGATTGGAATGGTTCT : GATGTTGCTGTGAAGATACTCATGGAACAAGATTTTCATGCAGAGCGATTCAAGGAATTTTTGCGGGAG : GTTGCAATTATGAAGCGGTTGCGACACCCAAATATTGTGCTTTTTATGGGTGCAGTTACTCAGCGACCAAACTTGTCCATAGTTACAGAATATTTATCAAG : AGGTAGCTTATATAGACTTCTTCATAAACCTGGTGCTAGGGAGGTTTTGGATGAAAGGTGTCGGTTGTCTATGGCATATGATGTG : GCAAAGGGGATGAATTATCTACATAAACGCAATCCTCCCATCGTTCATAGAGATTTGAAATCTCCAAATCTTTTAGTGGACAAAAAATACACAGTGAAG : GTCTGTGATTTTGGCCTTTCTCGTTTAAAAGCGAACACATTTCTCTCGTCAAAGTCTGCTGCTGGGACT : CCGGAATGGATGGCACCTGAAGTTCTTCGTGATGAACCATCAAATGAGAAATCTGATGTATACAGCTTTGGTGTTATTTTGTGGGAGCTGGCAACGTTGCAACAGCCTTGGAGTAATTTGAACCCAGCACAG : GTTGTAGCAGCTGTGAGCTTTAAGGGGAAAAGACTCGACATTCCACGTGACTTGACTCCTCAAGTGGCAAGCATTATAGAGGCTTGCTGGGCCAA : AGAACCATGGAAACGTCCCTCCTTTGCTGCAATCATGGATATGCTGAGACCACTAATTAAACCTCCTGTAACACCTCCTCAACCAGGCCGTACAGACACGCAGTTGATTGCGTGAATGCGTGTAATAGATGTATGATTTCTGCACATATTTGGCATTCTTTGTTAATCATCTTCTGGGAGGAACAAATCTTTGTTTACTTCAG : GCTTTTGTTCCGTACATATTAGTTCAGAATGCCCGTCTAGAGCCATTTTTTTTCTTCACAAATTCAAGCAGCCATTTCTCCCAGAAGAGCATTTGCAATTGACTTGTACGTTTCCTCGTGGAAATAATGTCTAGCCATATGATTTTGTTAATGTAAGCAAATAACAGTTCTTCTATTTTCTATCAAGAAATGATTTTGTACGTACAAGAATTTATAATGGGAATGCACAGTTCGTATCAC</gDNA_template>
            <first_frame> K  L  I  N  E  S  N  *  Y  T  H  T  F  L  T  Y  L  Y  I  *  *  N  I  R  C  A  F  K  S  S  A  Y  C  S  Y  E  L  K  S  V  K  S  H  K  F  I  I  S  K  S  *  F  F  S  L  *  A  F  L  D  *  S  E  T  E  E  S  E  A  K  W  V  V  R  V  I  L  E  I  I  *  G  I  I  *  N  M  I  K  V  E  G  S  L  I  *  L  S  *  T  Y  N  L  K  S  K  I  P  G  I  L  R  L  K  Q  D  F  P  H  L  F  F  L  S  L  L  I  R  Q  V  R  R  R  R  R  K  E  R  K  L  L  V  R  E  S  L  *  E  R  E  G  V  E  A  I  V  *  *  T  I  S  S  *  G  F  V  E  L  I  N  Y  *  D  G  N  V  Y  *  T  I  E  L  Y  F  V  E  S  S  C  R  *  Q  L  P  S  S  A  T  E  V  L  R  H  W  R  W  R  W  R  W  R  S  S  T  V  L  *  V  S  F  W  *  K  G  *  R  Q  N  R  *  *  *  R  I  *  L  G  F  E  *  S  P  *  *  Y  D  A  S  V  E  S  D  R  C  G  G  I  S  R  F  D  W  L  A  E  A  I  K  W  E  Q  L  W  *  K  F  D  L  R  G  V  L  H  A  V  V  V  *  C  G  G  V  I  W  I  S  Q  *  W  R  W  R  C  *  S  E  D  E  A  V  G  S  *  F  V  R  W  L  V  F  *  E  L  G  A  A  D  *  G  E  L  S  A  A  V  S  F  G  F  T  A  F  F  R  S  Y  L  C  *  *  S  K  F  F  G  S  C  A  *  *  I  R  I  P  C  F  S  F  S  C  F  G  G  D  P  F  P  S  I  L   : G  K  W  M  L  V  V  L  *  Q  S  A  *  W  I  L  L  D  P  W  D  G  S  I  C  L  D  C  L  L  R  S  T  R  K  C  P  G  S  I  Y  *  I  N  E  S  C  *  S  L  C  S  T  I  S  *  S  D  F  D  *  S  A  Y  G  S  K  L  E  R  T  A  E  S  D  P  *  S  L  S  Y  L  W  H  N  K  R  S  C  *  S  A  C  S  A  G  L  Q  S  Y  G  :  G  R  N  F  C  R  R  R  *  V  G  S  F  V  E  G  V  *  L  *  A  E  G  L  S  R  I  H  C  A  S  H  W  *  P  V  C  W  P  L  Q  A  S  S  F  A  I  *   : S  S  S  *  R  H  W  F  T  M  S  N  C  Q  R  M  *  I  L  *  Q  S  *  C  F  L  M  F  S  S  F  W  T  *  Q  :  G  V  P  G  *  F  D  W  E  P  W  M  L  M  R  T  R  F  L  A  Q  R  P  I  F  Y  L  N  L  F  T  I  A  I  S  E  I  Q  R  S  *  T  D  N  *  F  Q  V  T  C  Q  T  V  F  L  G  L  S  I  A  *  S  C  V  *  G  I  F  S  R :   S  C  C  *  W  R  R  R  T  N  *  P  K  *  H  *  E  K  Q  C  C  H  W  S  K  *  P  *  *  S  F  S  V  T  C  A  C  N  *  :  G  H  G  S  C  E  V  C  P  S  S  F  A  W  R  Y  T  I  I  R  P  K  R  Y  R  E  *  Y  A  I  S  *  E  R  K  S  T  C  S  L  *  N  K  *  R  H  C  P  *  N  R  R  F  *  Y  T  L  G  R  S  C  S  E  G  E  D  W  G  R :   V  F  W  Y  C  S  P  C  *  L  E  W  F   : *  C  C  C  E  D  T  H  G  T  R  F  S  C  R  A  I  Q  G  I  F  A  G   : G  C  N  Y  E  A  V  A  T  P  K  Y  C  A  F  Y  G  C  S  Y  S  A  T  K  L  V  H  S  Y  R  I  F  I  K  :  R  *  L  I  *  T  S  S  *  T  W  C  *  G  G  F  G  *  K  V  S  V  V  Y  G  I  *  C   : G  K  G  D  E  L  S  T  *  T  Q  S  S  H  R  S  *  R  F  E  I  S  K  S  F  S  G  Q  K  I  H  S  E   : G  L  *  F  W  P  F  S  F  K  S  E  H  I  S  L  V  K  V  C  C  W  D   : S  G  M  D  G  T  *  S  S  S  *  *  T  I  K  *  E  I  *  C  I  Q  L  W  C  Y  F  V  G  A  G  N  V  A  T  A  L  E  *  F  E  P  S  T   : G  C  S  S  C  E  L  *  G  E  K  T  R  H  S  T  *  L  D  S  S  S  G  K  H  Y  R  G  L  L  G  Q  :  R  T  M  E  T  S  L  L  C  C  N  H  G  Y  A  E  T  T  N  *  T  S  C  N  T  S  S  T  R  P  Y  R  H  A  V  D  C  V  N  A  C  N  R  C  M  I  S  A  H  I  W  H  S  L  L  I  I  F  W  E  E  Q  I  F  V  Y  F  R :   L  L  F  R  T  Y  *  F  R  M  P  V  *  S  H  F  F  S  S  Q  I  Q  A  A  I  S  P  R  R  A  F  A  I  D  L  Y  V  S  S  W  K  *  C  L  A  I  *  F  C  *  C  K  Q  I  T  V  L  L  F  S  I  K  K  *  F  C  T  Y  K  N  L  *  W  E  C  T  V  R  I   </first_frame>
            <second_frame>  S  L  *  T  N  Q  I  N  I  H  I  L  F  *  H  I  Y  T  F  N  K  I  S  D  V  L  L  S  Q  V  L  T  V  L  M  N  S  N  Q  S  K  V  I  S  L  S  S  L  S  R  N  F  S  A  Y  K  H  F  W  I  D  R  K  R  K  K  V  R  P  N  G  L  *  E  *  Y  L  K  L  Y  R  E  S  F  E  I  *  *  K  *  R  G  V  *  Y  N  *  V  K  L  I  T  *  S  R  K  F  Q  E  Y  Y  D  *  N  K  T  S  P  I  F  F  F  S  H  F  S  F  D  K  Y  E  E  E  E  E  K  R  E  N  F  *  *  E  K  V  F  E  R  E  R  E  L  K  L  *  C  N  E  Q  F  L  A  R  V  L  L  N  *  *  I  I  E  M  E  M  S  T  R  R  S  N  Y  T  L  L  S  Q  V  A  D  D  N  Y  L  P  P  P  P  K  Y  S  V  T  G  G  G  G  G  G  G  G  V  A  P  Y  Y  E  S  H  S  G  E  K  G  K  G  K  T  G  D  N  R  G  F  D  W  D  L  S  D  H  R  S  N  M  M  Q  A  S  N  R  I  G  A  A  A  F  P  G  S  I  G  L  Q  R  Q  S  S  G  S  S  F  G  E  S  S  I  S  G  E  Y  Y  M  P  S  L  S  N  A  E  A  S  F  G  Y  L  N  D  G  G  G  G  A  E  V  R  M  K  P  L  E  A  N  L  F  G  G  S  S  S  K  S  W  A  Q  Q  T  E  E  S  Y  Q  L  Q  L  A  L  A  L  R  L  S  S  E  A  T  C  A  D  D  P  N  F  L  D  H  V  P  D  E  S  A  S  R  A  S  A  S  A  A  S  A  E  T  L  S  H  R  F  W  :  V  N  G  C  L  S  Y  F  D  K  V  P  D  G  F  Y  L  I  H  G  M  D  P  Y  V  W  I  V  C  S  D  L  Q  E  N  A  R  V  P  S  I  E  S  M  R  A  V  D  P  S  V  V  P  S  V  E  V  I  L  I  D  R  R  T  D  P  S  L  K  E  L  Q  N  R  I  H  S  L  S  P  T  C  G  T  T  K  E  V  V  D  Q  L  A  Q  L  V  C  S  H  M  G :   G  A  T  S  A  G  E  D  E  L  V  P  L  W  K  E  C  S  Y  E  L  K  D  C  L  G  S  T  V  L  P  I  G  S  L  S  V  G  L  C  R  H  R  A  L  L  F  K  :  V  L  A  D  A  I  G  L  P  C  R  I  A  K  G  C  K  Y  C  N  R  A  D  A  S  S  C  L  V  R  F  G  P  D  R :   E  Y  L  V  D  L  I  G  S  P  G  C  L  C  E  P  D  S  S  L  N  G  P  S  S  I  S  I  S  S  P  L  R  F  P  R  F  R  E  V  E  P  T  T  D  F  R  S  L  A  K  Q  Y  F  S  D  C  Q  S  L  N  L  V  F  E  E  S  S  A   : G  A  A  V  D  G  D  A  G  Q  T  D  R  N  N  I  E  R  N  S  A  V  T  G  P  S  N  R  D  E  V  S  R  L  P  V  P  A  I  R :   D  M  A  P  V  K  Y  V  R  P  V  L  H  G  D  T  Q  L  S  D  P  R  D  I  G  N  D  M  R  F  L  E  R  G  S  Q  L  V  P  S  K  I  S  R  D  I  A  L  E  I  E  D  F  D  I  P  W  E  D  L  V  L  K  E  R  I  G  A   : G  S  F  G  T  V  H  R  A  D  W  N  G  S  :  D  V  A  V  K  I  L  M  E  Q  D  F  H  A  E  R  F  K  E  F  L  R  E  :  V  A  I  M  K  R  L  R  H  P  N  I  V  L  F  M  G  A  V  T  Q  R  P  N  L  S  I  V  T  E  Y  L  S  R :   G  S  L  Y  R  L  L  H  K  P  G  A  R  E  V  L  D  E  R  C  R  L  S  M  A  Y  D  V  :  A  K  G  M  N  Y  L  H  K  R  N  P  P  I  V  H  R  D  L  K  S  P  N  L  L  V  D  K  K  Y  T  V  K  :  V  C  D  F  G  L  S  R  L  K  A  N  T  F  L  S  S  K  S  A  A  G  T  :  P  E  W  M  A  P  E  V  L  R  D  E  P  S  N  E  K  S  D  V  Y  S  F  G  V  I  L  W  E  L  A  T  L  Q  Q  P  W  S  N  L  N  P  A  Q  :  V  V  A  A  V  S  F  K  G  K  R  L  D  I  P  R  D  L  T  P  Q  V  A  S  I  I  E  A  C  W  A  K :   E  P  W  K  R  P  S  F  A  A  I  M  D  M  L  R  P  L  I  K  P  P  V  T  P  P  Q  P  G  R  T  D  T  Q  L  I  A  *  M  R  V  I  D  V  *  F  L  H  I  F  G  I  L  C  *  S  S  S  G  R  N  K  S  L  F  T  S   : G  F  C  S  V  H  I  S  S  E  C  P  S  R  A  I  F  F  L  H  K  F  K  Q  P  F  L  P  E  E  H  L  Q  L  T  C  T  F  P  R  G  N  N  V  *  P  Y  D  F  V  N  V  S  K  *  Q  F  F  Y  F  L  S  R  N  D  F  V  R  T  R  I  Y  N  G  N  A  Q  F  V  S  </second_frame>
            <third_frame>   A  Y  K  R  I  K  L  I  Y  T  Y  F  S  D  I  F  I  H  L  I  K  Y  P  M  C  F  *  V  K  C  L  L  F  L  *  T  Q  I  S  Q  K  S  *  V  Y  H  L  *  V  V  I  F  Q  L  I  S  I  F  G  L  I  G  N  G  R  K  *  G  Q  M  G  C  K  S  N  T  *  N  Y  I  G  N  H  L  K  Y  D  K  S  R  G  E  F  N  I  I  K  L  N  L  *  L  K  V  E  N  S  R  N  I  T  T  K  T  R  L  P  P  S  F  F  S  L  T  S  H  S  T  S  T  K  K  K  K  K  R  E  K  T  F  S  E  R  K  S  L  R  E  R  G  S  *  S  Y  S  V  M  N  N  F  *  L  G  F  C  *  I  D  K  L  L  R  W  K  C  L  L  D  D  R  I  I  L  C  *  V  K  L  Q  M  T  I  T  F  L  R  H  R  S  T  P  S  L  A  V  A  V  E  V  E  E  *  H  R  I  M  S  L  I  L  V  K  R  V  K  A  K  Q  V  I  I  E  D  L  I  G  I  *  V  I  T  V  V  I  *  C  K  R  R  I  G  S  V  R  R  H  F  Q  V  R  L  A  C  R  G  N  Q  V  G  A  A  L  V  K  V  R  S  P  G  S  I  T  C  R  R  C  L  M  R  R  R  H  L  D  I  S  M  M  A  V  A  V  L  K  *  G  *  S  R  W  K  L  I  C  S  V  A  R  L  L  R  A  G  R  S  R  L  R  R  V  I  S  C  S  *  L  W  L  Y  G  F  L  P  K  L  P  V  L  M  I  Q  I  F  W  I  M  C  L  M  N  P  H  P  V  L  Q  L  Q  L  L  R  R  R  P  F  P  I  D  S  G :   *  M  D  A  C  R  T  L  T  K  C  L  M  D  F  T  *  S  M  G  W  I  H  M  S  G  L  S  A  Q  I  Y  K  K  M  P  G  F  H  L  L  N  Q  *  E  L  L  I  P  L  *  Y  H  Q  L  K  *  F  *  L  I  G  V  R  I  Q  A  *  K  N  C  R  I  G  S  I  V  S  L  L  L  V  A  Q  Q  K  K  L  L  I  S  L  L  S  W  S  A  V  I  W   : G  A  Q  L  L  P  E  K  M  S  W  F  L  C  G  R  S  V  V  M  S  *  R  I  V  *  D  P  L  C  F  P  L  V  A  C  L  L  A  F  A  G  I  E  L  C  Y  L  K :   F  *  L  T  P  L  V  Y  H  V  E  L  P  K  D  V  N  I  V  T  E  L  M  L  P  H  V  *  F  V  L  D  L  T   : G  S  T  W  L  I  *  L  G  A  L  D  A  Y  A  N  Q  I  P  R  S  T  A  H  L  L  S  Q  S  L  H  H  C  D  F  R  D  S  E  K  L  N  R  Q  L  I  S  G  H  L  P  N  S  I  S  R  I  V  N  R  L  I  L  C  L  R  N  L  Q  Q  :  E  L  L  L  M  E  T  Q  D  K  L  T  E  I  T  L  R  E  T  V  L  S  L  V  Q  V  T  V  M  K  F  L  G  Y  L  C  L  Q  L   : G  T  W  L  L  *  S  M  S  V  Q  F  C  M  E  I  H  N  Y  Q  T  Q  E  I  *  G  M  I  C  D  F  L  R  E  E  V  N  L  F  P  L  K  *  V  E  T  L  P  L  K  *  K  I  L  I  Y  P  G  K  I  L  F  *  R  R  G  L  G  Q  :  G  L  L  V  L  F  T  V  L  I  G  M  V  L :   M  L  L  *  R  Y  S  W  N  K  I  F  M  Q  S  D  S  R  N  F  C  G  R :   L  Q  L  *  S  G  C  D  T  Q  I  L  C  F  L  W  V  Q  L  L  S  D  Q  T  C  P  *  L  Q  N  I  Y  Q   : E  V  A  Y  I  D  F  F  I  N  L  V  L  G  R  F  W  M  K  G  V  G  C  L  W  H  M  M  W :   Q  R  G  *  I  I  Y  I  N  A  I  L  P  S  F  I  E  I  *  N  L  Q  I  F  *  W  T  K  N  T  Q  *  R :   S  V  I  L  A  F  L  V  *  K  R  T  H  F  S  R  Q  S  L  L  L  G  L :   R  N  G  W  H  L  K  F  F  V  M  N  H  Q  M  R  N  L  M  Y  T  A  L  V  L  F  C  G  S  W  Q  R  C  N  S  L  G  V  I  *  T  Q  H  R :   L  *  Q  L  *  A  L  R  G  K  D  S  T  F  H  V  T  *  L  L  K  W  Q  A  L  *  R  L  A  G  P   : K  N  H  G  N  V  P  P  L  L  Q  S  W  I  C  *  D  H  *  L  N  L  L  *  H  L  L  N  Q  A  V  Q  T  R  S  *  L  R  E  C  V  *  *  M  Y  D  F  C  T  Y  L  A  F  F  V  N  H  L  L  G  G  T  N  L  C  L  L  Q  :  A  F  V  P  Y  I  L  V  Q  N  A  R  L  E  P  F  F  F  F  T  N  S  S  S  H  F  S  Q  K  S  I  C  N  *  L  V  R  F  L  V  E  I  M  S  S  H  M  I  L  L  M  *  A  N  N  S  S  S  I  F  Y  Q  E  M  I  L  Y  V  Q  E  F  I  M  G  M  H  S  S  Y  H </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0100J12.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53238" stop="53870"/>
                    <exon start="59632" stop="59933"/>
                    <exon start="60021" stop="60165"/>
                    <exon start="60419" stop="60522"/>
                    <exon start="61786" stop="61994"/>
                    <exon start="64000" stop="64117"/>
                    <exon start="64206" stop="64411"/>
                    <exon start="64552" stop="64592"/>
                    <exon start="64888" stop="64956"/>
                    <exon start="65100" stop="65200"/>
                    <exon start="65284" stop="65368"/>
                    <exon start="65443" stop="65541"/>
                    <exon start="66364" stop="66432"/>
                    <exon start="66532" stop="66663"/>
                    <exon start="67434" stop="67528"/>
                    <exon start="67617" stop="67731"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>2520</number_coding_nucleotides>
                  <number_encoded_amino_acids>840</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IIEMEMSTRRSNYTLLSQVADDNYLPPPPKYSVTGGGGGGGGVAPYYESHSGEKGKGKTGDNRGFDWDLSDHRSNMMQASNRIGAAAFPGSIGLQRQSSGSSFGESSISGEYYMPSLSNAEASFGYLNDGGGGAEVRMKPLEANLFGGSSSKSWAQQTEESYQLQLALALRLSSEATCADDPNFLDHVPDESASRASASAASAETLSHRFWVNGCLSYFDKVPDGFYLIHGMDPYVWIVCSDLQENARVPSIESMRAVDPSVVPSVEVILIDRRTDPSLKELQNRIHSLSPTCGTTKEVVDQLAQLVCSHMGGATSAGEDELVPLWKECSYELKDCLGSTVLPIGSLSVGLCRHRALLFKVLADAIGLPCRIAKGCKYCNRADASSCLVRFGPDREYLVDLIGSPGCLCEPDSSLNGPSSISISSPLRFPRFREVEPTTDFRSLAKQYFSDCQSLNLVFEESSAGAAVDGDAGQTDRNNIERNSAVTGPSNRDEVSRLPVPAIRDMAPVKYVRPVLHGDTQLSDPRDIGNDMRFLERGSQLVPSKISRDIALEIEDFDIPWEDLVLKERIGAGSFGTVHRADWNGSDVAVKILMEQDFHAERFKEFLREVAIMKRLRHPNIVLFMGAVTQRPNLSIVTEYLSRGSLYRLLHKPGAREVLDERCRLSMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWSNLNPAQVVAAVSFKGKRLDIPRDLTPQVASIIEACWAKEPWKRPSFAAIMDMLRPLIKPPVTPPQPGRTDTQLIA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="72215" PGL_stop="68841"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="72215" e_stop="70965"/>
            <exon e_start="69424" e_stop="68841"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.956" e_score="0.999"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="72215" e_stop="70965" e_length="1251"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.956">
            <gDNA_intron_boundary i_start="70964" i_stop="69425" i_length="1540"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="69424" e_stop="68841" e_length="584"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72215" stop="71102"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U323271" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71102" stop="70965"/>
              <exon start="69424" stop="68841"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U329428" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTATGGATGAGATAGAGAAACTCAGGAATGAGAAGAGTTTGATGATGCAGGAAGTTGTTGAGTTGCAGCAGCAGCAGCGTGGAACAGTTCAACAAATGGAATCCGTTAATGAAAAGCTTCAGGCTGCAGAACAAAGACAGAAGCAGATGGTTTCATTCTTGGCCAAGGTGCTTCAAAATCCCACATTCTTGGCTCGTGTTCGGCAGATGAAGGAGCAAGGAGAAATTACTAGTCCAAGAACAATGAGGAAATTTGTTAAACATCAGTCACATGGTCCGGATGGAGTGGGGTCGTCTTCAATGGAAGGGCAGATAGTCAAGTTCAGGTCTGACTTTCAAGACCTTGCAGGATGCTTTGACAGCCCAGATTTCAATACAGTTGTGGATCAACAACTCCCAGAAATTGGTTTAGGAGCGGAAGCCATGCCTTTTGAAGGTGTTCCTGTTGCTGATGAACTGACAGTGGCACATGAACTTCTTAATTGTTCAGATCGGGAAATACGAGGAGCTTCATTCTTTAACTCCGAAGGCTCTCAATTCAAAGGGAAGAATGTAGCTAGTCCTCAAATAGAAGTTATGCCCGAGTACTTTGCCTCTTTTCCAGAGGAGATGGGGAAGGAGAAGAACGTTTCAGGATTTTCCACACCAGCTATTGGAAGTATGGTGAAAGATGAGGAACTTTGGGGTATGGGTTTTGAAGCCAGTGCTGGCATGCCAAGCACTGGTGCCGAGTTATGGGATAGTCGTAGCAGCTATGTTCCAGACTTTGGTGTTAGCTCTGGTTTGTCAGATTTATGGGATATAGATCCCTTGCAGGTAGCTGGAAGTTCTGGGGTCGATAAGTGGCCAGCTGATGGGTCTCCTTTTGGTCAGTCTGGAAGTCATGCAAACCAGCCCAAGAATGATAGTTTCTAGGAAAGAGTACCCTTGGGCCTTCAGTGTGCCATTGGGATACTGCCATCATTTAGTTGATGGGACATAATATTGAATGAGTGATTATAAATATTTTAGTTGATAATTACTTTTGACTGGTTCTTTTCTTCTATTCCCTCTCCTTGGTCTGCTATTTCTCCGCTAATTGTGCTGGACTGTGAATATTTGATGGCATAAATTGTAGATATTTCCTGCTAACATATACTCTTTTAAGTTGTGAAATACGCAGGTTTGCAGCACTGAAGGCGAGTATGGGACTTCTTTAGAGAATTTCGGACTTGAATGAGTGAATGACATTGCTCGCTCAAGCTTTTTCCAG : TCGATTCTTCTGTAATTGCTTGCTTGGATCTTGTACCCTCGCCTAGGCAAAGCAATGATGTACATCAGAAACAGCTGGCGAAGTCCTTCTCAGGGCTTAGCTCAGGTGGCAAAGGTCGAGGGAAGTTCAAGCCTTGCATCATGCGAACTAAGCCTGATATTTAAGTGGACATTGTGTTTGGTTCCAAGGGTTGGGCCAGACTGATTTCTTGGTTATCAAGAAAAAGATCCTGCTCAGCTATTCGGTTCCCCTTAGCTTATTTGTATATATCTAAATGTGTAGGATGTTCATCAGGGGCAATCTGATTATTGTTGTGTCAATGTAATAATTGATAGGTTATCCTGGCAAACCATTTGAGAAGTATCTGTACTGTGATATTGATAGGGGGAAGAAATGGTCATCAGAAAGGTGATTAGACATGACAAACTTATAGCTTACCATGGATATGATTCCTAAATAAGAGGATATTGGGGTTGATCATTAGGGTAGAACATTAGTAAGTAGTCCAACATTGTTTAGTTTCCTTATTATTGTTCTCCTAGTTTCGTATTCTGCAATTTTAGTATTATCTGTTGTTCCTTTTT</gDNA_template>
            <first_frame> L  W  M  R  *  R  N  S  G  M  R  R  V  *  *  C  R  K  L  L  S  C  S  S  S  S  V  E  Q  F  N  K  W  N  P  L  M  K  S  F  R  L  Q  N  K  D  R  S  R  W  F  H  S  W  P  R  C  F  K  I  P  H  S  W  L  V  F  G  R  *  R  S  K  E  K  L  L  V  Q  E  Q  *  G  N  L  L  N  I  S  H  M  V  R  M  E  W  G  R  L  Q  W  K  G  R  *  S  S  S  G  L  T  F  K  T  L  Q  D  A  L  T  A  Q  I  S  I  Q  L  W  I  N  N  S  Q  K  L  V  *  E  R  K  P  C  L  L  K  V  F  L  L  L  M  N  *  Q  W  H  M  N  F  L  I  V  Q  I  G  K  Y  E  E  L  H  S  L  T  P  K  A  L  N  S  K  G  R  M  *  L  V  L  K  *  K  L  C  P  S  T  L  P  L  F  Q  R  R  W  G  R  R  R  T  F  Q  D  F  P  H  Q  L  L  E  V  W  *  K  M  R  N  F  G  V  W  V  L  K  P  V  L  A  C  Q  A  L  V  P  S  Y  G  I  V  V  A  A  M  F  Q  T  L  V  L  A  L  V  C  Q  I  Y  G  I  *  I  P  C  R  *  L  E  V  L  G  S  I  S  G  Q  L  M  G  L  L  L  V  S  L  E  V  M  Q  T  S  P  R  M  I  V  S  R  K  E  Y  P  W  A  F  S  V  P  L  G  Y  C  H  H  L  V  D  G  T  *  Y  *  M  S  D  Y  K  Y  F  S  *  *  L  L  L  T  G  S  F  L  L  F  P  L  L  G  L  L  F  L  R  *  L  C  W  T  V  N  I  *  W  H  K  L  *  I  F  P  A  N  I  Y  S  F  K  L  *  N  T  Q  V  C  S  T  E  G  E  Y  G  T  S  L  E  N  F  G  L  E  *  V  N  D  I  A  R  S  S  F  F  Q  :  S  I  L  L  *  L  L  A  W  I  L  Y  P  R  L  G  K  A  M  M  Y  I  R  N  S  W  R  S  P  S  Q  G  L  A  Q  V  A  K  V  E  G  S  S  S  L  A  S  C  E  L  S  L  I  F  K  W  T  L  C  L  V  P  R  V  G  P  D  *  F  L  G  Y  Q  E  K  D  P  A  Q  L  F  G  S  P  *  L  I  C  I  Y  L  N  V  *  D  V  H  Q  G  Q  S  D  Y  C  C  V  N  V  I  I  D  R  L  S  W  Q  T  I  *  E  V  S  V  L  *  Y  *  *  G  E  E  M  V  I  R  K  V  I  R  H  D  K  L  I  A  Y  H  G  Y  D  S  *  I  R  G  Y  W  G  *  S  L  G  *  N  I  S  K  *  S  N  I  V  *  F  P  Y  Y  C  S  P  S  F  V  F  C  N  F  S  I  I  C  C  S  F   </first_frame>
            <second_frame>  Y  G  *  D  R  E  T  Q  E  *  E  E  F  D  D  A  G  S  C  *  V  A  A  A  A  A  W  N  S  S  T  N  G  I  R  *  *  K  A  S  G  C  R  T  K  T  E  A  D  G  F  I  L  G  Q  G  A  S  K  S  H  I  L  G  S  C  S  A  D  E  G  A  R  R  N  Y  *  S  K  N  N  E  E  I  C  *  T  S  V  T  W  S  G  W  S  G  V  V  F  N  G  R  A  D  S  Q  V  Q  V  *  L  S  R  P  C  R  M  L  *  Q  P  R  F  Q  Y  S  C  G  S  T  T  P  R  N  W  F  R  S  G  S  H  A  F  *  R  C  S  C  C  *  *  T  D  S  G  T  *  T  S  *  L  F  R  S  G  N  T  R  S  F  I  L  *  L  R  R  L  S  I  Q  R  E  E  C  S  *  S  S  N  R  S  Y  A  R  V  L  C  L  F  S  R  G  D  G  E  G  E  E  R  F  R  I  F  H  T  S  Y  W  K  Y  G  E  R  *  G  T  L  G  Y  G  F  *  S  Q  C  W  H  A  K  H  W  C  R  V  M  G  *  S  *  Q  L  C  S  R  L  W  C  *  L  W  F  V  R  F  M  G  Y  R  S  L  A  G  S  W  K  F  W  G  R  *  V  A  S  *  W  V  S  F  W  S  V  W  K  S  C  K  P  A  Q  E  *  *  F  L  G  K  S  T  L  G  P  S  V  C  H  W  D  T  A  I  I  *  L  M  G  H  N  I  E  *  V  I  I  N  I  L  V  D  N  Y  F  *  L  V  L  F  F  Y  S  L  S  L  V  C  Y  F  S  A  N  C  A  G  L  *  I  F  D  G  I  N  C  R  Y  F  L  L  T  Y  T  L  L  S  C  E  I  R  R  F  A  A  L  K  A  S  M  G  L  L  *  R  I  S  D  L  N  E  *  M  T  L  L  A  Q  A  F  S  S :   R  F  F  C  N  C  L  L  G  S  C  T  L  A  *  A  K  Q  *  C  T  S  E  T  A  G  E  V  L  L  R  A  *  L  R  W  Q  R  S  R  E  V  Q  A  L  H  H  A  N  *  A  *  Y  L  S  G  H  C  V  W  F  Q  G  L  G  Q  T  D  F  L  V  I  K  K  K  I  L  L  S  Y  S  V  P  L  S  L  F  V  Y  I  *  M  C  R  M  F  I  R  G  N  L  I  I  V  V  S  M  *  *  L  I  G  Y  P  G  K  P  F  E  K  Y  L  Y  C  D  I  D  R  G  K  K  W  S  S  E  R  *  L  D  M  T  N  L  *  L  T  M  D  M  I  P  K  *  E  D  I  G  V  D  H  *  G  R  T  L  V  S  S  P  T  L  F  S  F  L  I  I  V  L  L  V  S  Y  S  A  I  L  V  L  S  V  V  P  F  </second_frame>
            <third_frame>   M  D  E  I  E  K  L  R  N  E  K  S  L  M  M  Q  E  V  V  E  L  Q  Q  Q  Q  R  G  T  V  Q  Q  M  E  S  V  N  E  K  L  Q  A  A  E  Q  R  Q  K  Q  M  V  S  F  L  A  K  V  L  Q  N  P  T  F  L  A  R  V  R  Q  M  K  E  Q  G  E  I  T  S  P  R  T  M  R  K  F  V  K  H  Q  S  H  G  P  D  G  V  G  S  S  S  M  E  G  Q  I  V  K  F  R  S  D  F  Q  D  L  A  G  C  F  D  S  P  D  F  N  T  V  V  D  Q  Q  L  P  E  I  G  L  G  A  E  A  M  P  F  E  G  V  P  V  A  D  E  L  T  V  A  H  E  L  L  N  C  S  D  R  E  I  R  G  A  S  F  F  N  S  E  G  S  Q  F  K  G  K  N  V  A  S  P  Q  I  E  V  M  P  E  Y  F  A  S  F  P  E  E  M  G  K  E  K  N  V  S  G  F  S  T  P  A  I  G  S  M  V  K  D  E  E  L  W  G  M  G  F  E  A  S  A  G  M  P  S  T  G  A  E  L  W  D  S  R  S  S  Y  V  P  D  F  G  V  S  S  G  L  S  D  L  W  D  I  D  P  L  Q  V  A  G  S  S  G  V  D  K  W  P  A  D  G  S  P  F  G  Q  S  G  S  H  A  N  Q  P  K  N  D  S  F  *  E  R  V  P  L  G  L  Q  C  A  I  G  I  L  P  S  F  S  *  W  D  I  I  L  N  E  *  L  *  I  F  *  L  I  I  T  F  D  W  F  F  S  S  I  P  S  P  W  S  A  I  S  P  L  I  V  L  D  C  E  Y  L  M  A  *  I  V  D  I  S  C  *  H  I  L  F  *  V  V  K  Y  A  G  L  Q  H  *  R  R  V  W  D  F  F  R  E  F  R  T  *  M  S  E  *  H  C  S  L  K  L  F  P   : V  D  S  S  V  I  A  C  L  D  L  V  P  S  P  R  Q  S  N  D  V  H  Q  K  Q  L  A  K  S  F  S  G  L  S  S  G  G  K  G  R  G  K  F  K  P  C  I  M  R  T  K  P  D  I  *  V  D  I  V  F  G  S  K  G  W  A  R  L  I  S  W  L  S  R  K  R  S  C  S  A  I  R  F  P  L  A  Y  L  Y  I  S  K  C  V  G  C  S  S  G  A  I  *  L  L  L  C  Q  C  N  N  *  *  V  I  L  A  N  H  L  R  S  I  C  T  V  I  L  I  G  G  R  N  G  H  Q  K  G  D  *  T  *  Q  T  Y  S  L  P  W  I  *  F  L  N  K  R  I  L  G  L  I  I  R  V  E  H  *  *  V  V  Q  H  C  L  V  S  L  L  L  F  S  *  F  R  I  L  Q  F  *  Y  Y  L  L  F  L  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0100J12.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="72213" stop="71302"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>909</number_coding_nucleotides>
                  <number_encoded_amino_acids>303</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MDEIEKLRNEKSLMMQEVVELQQQQRGTVQQMESVNEKLQAAEQRQKQMVSFLAKVLQNPTFLARVRQMKEQGEITSPRTMRKFVKHQSHGPDGVGSSSMEGQIVKFRSDFQDLAGCFDSPDFNTVVDQQLPEIGLGAEAMPFEGVPVADELTVAHELLNCSDREIRGASFFNSEGSQFKGKNVASPQIEVMPEYFASFPEEMGKEKNVSGFSTPAIGSMVKDEELWGMGFEASAGMPSTGAELWDSRSSYVPDFGVSSGLSDLWDIDPLQVAGSSGVDKWPADGSPFGQSGSHANQPKNDSF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="73795" PGL_stop="72470"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="73795" e_stop="72470"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="73795" e_stop="72470" e_length="1326"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73795" stop="72470"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U320833" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGAATCCAAAAAAAAAATAAAAAATTAAAATGGAGCTTCAGGAGAAAAACTCCACCGACTTTACAGAGTTGTTTACAGGAGATATTTCTTGGTTTGTATGTCGGCGTTACCTATATAAACCTCCCTTCAACCCCTTTTACCGACTTTTTATCTATCACCCTTATCGAAATTTTGAATCTTTTGATCACAAAAACTATTAAAGTTTCAATCTTTGATCCATAAAAACCACAAATCTCTTTGTATGATATGAACCCATTTGATAAAAAACAAGAATCTGATACTGATACAAAAACCCCATTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTTTTGCCACTCCTTTGAGCCAACATCCAGTTGGAGAAGGGGAAGGAGAAGGAGAAGGGGGAGAAATTGAACAGCCAGCTGAGGGAGGATTGGGTGTGCCGCAGCCTATGGAGTGTTTACATGGGATACAAATTCCGCCATTTTTGTCAAAGACTTTTGATTTGGTTGAGGACCCTTTATTGGATACGATTATTTCTTGGGGTAGAAATGGAGAAAGCTTTGTAGTTTGGGATCCAGTGGAGTTTTCAAGATTGGTTCTTCCTAGGAATTTCAAGCACAGTAATTTCTCCAGCTTTGTTCGACAGCTTAATACATATGTGGGTATTAATTTTAGCACACTGGCCAACTTTTTCTGGCTAATGTGTTAAATCTCTAGTTCTCTAACTCTGTCTCTCTTTTTAATGATATTTTTTCCTTGTATGTAATTTCTGTTGTAGTTTTTCATGTATCTTTATTTTTTCCCTCATTTTTCTGTAGTTTGTTTGCTCTTTTGTTGTTGATATACTGTAAAGATAATGTCTTAGGATGTAAATGTAAATAGATTTTTCGCGTTGTAAACAGTATAGGCTCCTGCGATTGTAAATGAGAGTTGGAGAACTGTTTTTTCTTCTTGATAGTTCAATGTTTTTGGCATCTTGTGTAAATGATGTCATTGAGATCTTTAGTGGATAGTAAAATGGTGGGTTCTTAAGTAAAATGGTAAAGAGGTGCGCTGTTCGTGATGTGGGCTTGTAGATAAAGCTCCCTGCATTGATGCATCTGCTGAGTTTGGGAGGTTCATCTATTGCTGCAGGTAGAATTCAAAGGTTCTGATTAAACAGAGTGTTTAAGCTTTGTAGTTTATATATGGTCTAACTTCAAAAGATCTACTAATTGTGTATTTCTAGTGTAATGCAGCTCCTGGAACTCATGAAAATTTGACAGTTAGCATCTTGCT</gDNA_template>
            <first_frame> K  N  P  K  K  K  *  K  I  K  M  E  L  Q  E  K  N  S  T  D  F  T  E  L  F  T  G  D  I  S  W  F  V  C  R  R  Y  L  Y  K  P  P  F  N  P  F  Y  R  L  F  I  Y  H  P  Y  R  N  F  E  S  F  D  H  K  N  Y  *  S  F  N  L  *  S  I  K  T  T  N  L  F  V  *  Y  E  P  I  *  *  K  T  R  I  *  Y  *  Y  K  N  P  I  F  D  *  N  G  L  *  I  C  C  V  F  T  N  F  T  P  F  C  *  P  I  F  S  F  Y  Q  F  W  I  F  C  H  S  F  E  P  T  S  S  W  R  R  G  R  R  R  R  R  G  R  N  *  T  A  S  *  G  R  I  G  C  A  A  A  Y  G  V  F  T  W  D  T  N  S  A  I  F  V  K  D  F  *  F  G  *  G  P  F  I  G  Y  D  Y  F  L  G  *  K  W  R  K  L  C  S  L  G  S  S  G  V  F  K  I  G  S  S  *  E  F  Q  A  Q  *  F  L  Q  L  C  S  T  A  *  Y  I  C  G  Y  *  F  *  H  T  G  Q  L  F  L  A  N  V  L  N  L  *  F  S  N  S  V  S  L  F  N  D  I  F  S  L  Y  V  I  S  V  V  V  F  H  V  S  L  F  F  P  S  F  F  C  S  L  F  A  L  L  L  L  I  Y  C  K  D  N  V  L  G  C  K  C  K  *  I  F  R  V  V  N  S  I  G  S  C  D  C  K  *  E  L  E  N  C  F  F  F  L  I  V  Q  C  F  W  H  L  V  *  M  M  S  L  R  S  L  V  D  S  K  M  V  G  S  *  V  K  W  *  R  G  A  L  F  V  M  W  A  C  R  *  S  S  L  H  *  C  I  C  *  V  W  E  V  H  L  L  L  Q  V  E  F  K  G  S  D  *  T  E  C  L  S  F  V  V  Y  I  W  S  N  F  K  R  S  T  N  C  V  F  L  V  *  C  S  S  W  N  S  *  K  F  D  S  *  H  L  A </first_frame>
            <second_frame>  R  I  Q  K  K  N  K  K  L  K  W  S  F  R  R  K  T  P  P  T  L  Q  S  C  L  Q  E  I  F  L  G  L  Y  V  G  V  T  Y  I  N  L  P  S  T  P  F  T  D  F  L  S  I  T  L  I  E  I  L  N  L  L  I  T  K  T  I  K  V  S  I  F  D  P  *  K  P  Q  I  S  L  Y  D  M  N  P  F  D  K  K  Q  E  S  D  T  D  T  K  T  P  F  L  T  E  M  D  S  E  F  A  A  F  S  P  I  S  L  P  F  A  D  P  S  S  P  F  I  N  F  G  S  F  A  T  P  L  S  Q  H  P  V  G  E  G  E  G  E  G  E  G  G  E  I  E  Q  P  A  E  G  G  L  G  V  P  Q  P  M  E  C  L  H  G  I  Q  I  P  P  F  L  S  K  T  F  D  L  V  E  D  P  L  L  D  T  I  I  S  W  G  R  N  G  E  S  F  V  V  W  D  P  V  E  F  S  R  L  V  L  P  R  N  F  K  H  S  N  F  S  S  F  V  R  Q  L  N  T  Y  V  G  I  N  F  S  T  L  A  N  F  F  W  L  M  C  *  I  S  S  S  L  T  L  S  L  F  L  M  I  F  F  P  C  M  *  F  L  L  *  F  F  M  Y  L  Y  F  F  P  H  F  S  V  V  C  L  L  F  C  C  *  Y  T  V  K  I  M  S  *  D  V  N  V  N  R  F  F  A  L  *  T  V  *  A  P  A  I  V  N  E  S  W  R  T  V  F  S  S  *  *  F  N  V  F  G  I  L  C  K  *  C  H  *  D  L  *  W  I  V  K  W  W  V  L  K  *  N  G  K  E  V  R  C  S  *  C  G  L  V  D  K  A  P  C  I  D  A  S  A  E  F  G  R  F  I  Y  C  C  R  *  N  S  K  V  L  I  K  Q  S  V  *  A  L  *  F  I  Y  G  L  T  S  K  D  L  L  I  V  Y  F  *  C  N  A  A  P  G  T  H  E  N  L  T  V  S  I  L   </second_frame>
            <third_frame>   E  S  K  K  K  I  K  N  *  N  G  A  S  G  E  K  L  H  R  L  Y  R  V  V  Y  R  R  Y  F  L  V  C  M  S  A  L  P  I  *  T  S  L  Q  P  L  L  P  T  F  Y  L  S  P  L  S  K  F  *  I  F  *  S  Q  K  L  L  K  F  Q  S  L  I  H  K  N  H  K  S  L  C  M  I  *  T  H  L  I  K  N  K  N  L  I  L  I  Q  K  P  H  F  *  L  K  W  T  L  N  L  L  R  F  H  Q  F  H  S  L  L  L  T  H  L  L  L  L  S  I  L  D  L  L  P  L  L  *  A  N  I  Q  L  E  K  G  K  E  K  E  K  G  E  K  L  N  S  Q  L  R  E  D  W  V  C  R  S  L  W  S  V  Y  M  G  Y  K  F  R  H  F  C  Q  R  L  L  I  W  L  R  T  L  Y  W  I  R  L  F  L  G  V  E  M  E  K  A  L  *  F  G  I  Q  W  S  F  Q  D  W  F  F  L  G  I  S  S  T  V  I  S  P  A  L  F  D  S  L  I  H  M  W  V  L  I  L  A  H  W  P  T  F  S  G  *  C  V  K  S  L  V  L  *  L  C  L  S  F  *  *  Y  F  F  L  V  C  N  F  C  C  S  F  S  C  I  F  I  F  S  L  I  F  L  *  F  V  C  S  F  V  V  D  I  L  *  R  *  C  L  R  M  *  M  *  I  D  F  S  R  C  K  Q  Y  R  L  L  R  L  *  M  R  V  G  E  L  F  F  L  L  D  S  S  M  F  L  A  S  C  V  N  D  V  I  E  I  F  S  G  *  *  N  G  G  F  L  S  K  M  V  K  R  C  A  V  R  D  V  G  L  *  I  K  L  P  A  L  M  H  L  L  S  L  G  G  S  S  I  A  A  G  R  I  Q  R  F  *  L  N  R  V  F  K  L  C  S  L  Y  M  V  *  L  Q  K  I  Y  *  L  C  I  S  S  V  M  Q  L  L  E  L  M  K  I  *  Q  L  A  S  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0100J12.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="73572" stop="73039"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>531</number_coding_nucleotides>
                  <number_encoded_amino_acids>177</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KPQISLYDMNPFDKKQESDTDTKTPFLTEMDSEFAAFSPISLPFADPSSPFINFGSFATPLSQHPVGEGEGEGEGGEIEQPAEGGLGVPQPMECLHGIQIPPFLSKTFDLVEDPLLDTIISWGRNGESFVVWDPVEFSRLVLPRNFKHSNFSSFVRQLNTYVGINFSTLANFFWLMC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0100J12.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="73794" stop="73573"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RIQKKNKKLKWSFRRKTPPTLQSCLQEIFLGLYVGVTYINLPSTPFTDFLSITLIEILNLLITKTIKVSIFDP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="80003" PGL_stop="80841"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="80003" e_stop="80841"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="80003" e_stop="80841" e_length="839"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80003" stop="80841"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U342549" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATATATATAGGAGCTACACTTTTACCCAAATCAATCAAAAACCCTATCTCCTATTCCAATTTACAGCTGAAAATCCCCAATTGAAGCTCACAATTTCAGTTCTGTATATATATAACGATCAGATTTAGTCTCTTTGATTCGAGTTGTTCTTGAAATTTACATGAAATTAGTAATAAGCAGTGATTTTGTTGTTTGTTTTGATTTTGCGTTTTTTTTAATAGCAATTTTGGATGTAACCGATGTAAAATAGTTTGAATTTAGGGTTAGTTTTTTCTTTTATTATTTGATGATTGTTTGGATAAAGTGATGGAAATGGAGGGTTCTCGTAGACCATTTGATAGATCAAGATTGGAGCCAGGACCTAAGAAACCAAGATTAGTCGAAGCCCCAATTGGAACTGAGCGAGGTTCTAATGGGAGAAGCTTTATTCCTCAACGGGGAGCTGGGAATTCGAGGATTCGAGCTAGTGATAAAGGGGGAGACTCGGAAAACAGTGATTCGATTCGCGGGTCTTTTCAACAGCAGACGCAGCATCAGGAGCTAGTGAGTCAATATAAGACGGCTTTAGCTGAACTAACATTTAATTCAAAGCCGATAATTACAAACTTGACTATTATTGCTGGTGAGAATTTGCAAGCGGCCAAGGCAATTGCTGCTACTATCTGCAACAACATTATTGAGGTGATATTCCGGTTTTAAATGCTACTGTGTCAATGTTGTTGATTTTGTTTAATTTAGTGTGTTTTATTACTTGGTTGTACAGAAGTGAAATCTGATAAAGAAGGCAAAGTTAGATTTATGATATTTTAGATTAGTGCAGCTGGTGTAATGAGTGTTGT</gDNA_template>
            <first_frame> I  Y  I  G  A  T  L  L  P  K  S  I  K  N  P  I  S  Y  S  N  L  Q  L  K  I  P  N  *  S  S  Q  F  Q  F  C  I  Y  I  T  I  R  F  S  L  F  D  S  S  C  S  *  N  L  H  E  I  S  N  K  Q  *  F  C  C  L  F  *  F  C  V  F  F  N  S  N  F  G  C  N  R  C  K  I  V  *  I  *  G  *  F  F  L  L  L  F  D  D  C  L  D  K  V  M  E  M  E  G  S  R  R  P  F  D  R  S  R  L  E  P  G  P  K  K  P  R  L  V  E  A  P  I  G  T  E  R  G  S  N  G  R  S  F  I  P  Q  R  G  A  G  N  S  R  I  R  A  S  D  K  G  G  D  S  E  N  S  D  S  I  R  G  S  F  Q  Q  Q  T  Q  H  Q  E  L  V  S  Q  Y  K  T  A  L  A  E  L  T  F  N  S  K  P  I  I  T  N  L  T  I  I  A  G  E  N  L  Q  A  A  K  A  I  A  A  T  I  C  N  N  I  I  E  V  I  F  R  F  *  M  L  L  C  Q  C  C  *  F  C  L  I  *  C  V  L  L  L  G  C  T  E  V  K  S  D  K  E  G  K  V  R  F  M  I  F  *  I  S  A  A  G  V  M  S  V   </first_frame>
            <second_frame>  Y  I  *  E  L  H  F  Y  P  N  Q  S  K  T  L  S  P  I  P  I  Y  S  *  K  S  P  I  E  A  H  N  F  S  S  V  Y  I  *  R  S  D  L  V  S  L  I  R  V  V  L  E  I  Y  M  K  L  V  I  S  S  D  F  V  V  C  F  D  F  A  F  F  L  I  A  I  L  D  V  T  D  V  K  *  F  E  F  R  V  S  F  F  F  Y  Y  L  M  I  V  W  I  K  *  W  K  W  R  V  L  V  D  H  L  I  D  Q  D  W  S  Q  D  L  R  N  Q  D  *  S  K  P  Q  L  E  L  S  E  V  L  M  G  E  A  L  F  L  N  G  E  L  G  I  R  G  F  E  L  V  I  K  G  E  T  R  K  T  V  I  R  F  A  G  L  F  N  S  R  R  S  I  R  S  *  *  V  N  I  R  R  L  *  L  N  *  H  L  I  Q  S  R  *  L  Q  T  *  L  L  L  L  V  R  I  C  K  R  P  R  Q  L  L  L  L  S  A  T  T  L  L  R  *  Y  S  G  F  K  C  Y  C  V  N  V  V  D  F  V  *  F  S  V  F  Y  Y  L  V  V  Q  K  *  N  L  I  K  K  A  K  L  D  L  *  Y  F  R  L  V  Q  L  V  *  *  V  L  </second_frame>
            <third_frame>   I  Y  R  S  Y  T  F  T  Q  I  N  Q  K  P  Y  L  L  F  Q  F  T  A  E  N  P  Q  L  K  L  T  I  S  V  L  Y  I  Y  N  D  Q  I  *  S  L  *  F  E  L  F  L  K  F  T  *  N  *  *  *  A  V  I  L  L  F  V  L  I  L  R  F  F  *  *  Q  F  W  M  *  P  M  *  N  S  L  N  L  G  L  V  F  S  F  I  I  *  *  L  F  G  *  S  D  G  N  G  G  F  S  *  T  I  *  *  I  K  I  G  A  R  T  *  E  T  K  I  S  R  S  P  N  W  N  *  A  R  F  *  W  E  K  L  Y  S  S  T  G  S  W  E  F  E  D  S  S  *  *  *  R  G  R  L  G  K  Q  *  F  D  S  R  V  F  S  T  A  D  A  A  S  G  A  S  E  S  I  *  D  G  F  S  *  T  N  I  *  F  K  A  D  N  Y  K  L  D  Y  Y  C  W  *  E  F  A  S  G  Q  G  N  C  C  Y  Y  L  Q  Q  H  Y  *  G  D  I  P  V  L  N  A  T  V  S  M  L  L  I  L  F  N  L  V  C  F  I  T  W  L  Y  R  S  E  I  *  *  R  R  Q  S  *  I  Y  D  I  L  D  *  C  S  W  C  N  E  C  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0100J12.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="80270" stop="80701"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>429</number_coding_nucleotides>
                  <number_encoded_amino_acids>143</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFLLLFDDCLDKVMEMEGSRRPFDRSRLEPGPKKPRLVEAPIGTERGSNGRSFIPQRGAGNSRIRASDKGGDSENSDSIRGSFQQQTQHQELVSQYKTALAELTFNSKPIITNLTIIAGENLQAAKAIAATICNNIIEVIFRF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="85478" PGL_stop="86054"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="85478" e_stop="86054"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="85478" e_stop="86054" e_length="577"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85478" stop="86054"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U327925" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCATGTTGGAACGCAAAATATTGGGCCGATGAATGCAACTCTGGAATCCAGGGGATCCATAGTGCAACAGGGAGAGACTCTCAGAGCTGCCTCTCCCTCTGCTCAGTCACCAATGCATCACCTTCCTCCATCCCCATCACTTATAACAAGCAACAGTAATCAAGTAATTAACAGTCCCGCTGAGCAGTACCAGATGCAAACCAGTTCTCGTTCTGATCCAAGACTATCCCAAATCTCAAGGAGGTCAAATCTAGATCCTCGTAACCAGTATGCCCAGGAATCTCTGACAATGCCATCTCGGAATACCATTTCAGTTAATTCACAAAGACAACACCCTCCAAGTTTGCAGAATTCGTCTGCCTTGTCTTCTTCTCATCAGTTGAGACAGAAGGTTCAGCGGGAAAGCCTGGAATCTGAATATTCTGTACAAACCAAGAATTCAACAGTTCCTGAGATTTCAGGTTTTCCTGATCCCTCTAGCACTAGCAGTTTGTTGGCTGCTGTTTTGAAGAGTGGAGTCATTGGTAATAAATCGAGTTCTGGTACTACGTCAAGTTCTCTTGATAAGGGTGCTCTC</gDNA_template>
            <first_frame> P  C  W  N  A  K  Y  W  A  D  E  C  N  S  G  I  Q  G  I  H  S  A  T  G  R  D  S  Q  S  C  L  S  L  C  S  V  T  N  A  S  P  S  S  I  P  I  T  Y  N  K  Q  Q  *  S  S  N  *  Q  S  R  *  A  V  P  D  A  N  Q  F  S  F  *  S  K  T  I  P  N  L  K  E  V  K  S  R  S  S  *  P  V  C  P  G  I  S  D  N  A  I  S  E  Y  H  F  S  *  F  T  K  T  T  P  S  K  F  A  E  F  V  C  L  V  F  F  S  S  V  E  T  E  G  S  A  G  K  P  G  I  *  I  F  C  T  N  Q  E  F  N  S  S  *  D  F  R  F  S  *  S  L  *  H  *  Q  F  V  G  C  C  F  E  E  W  S  H  W  *  *  I  E  F  W  Y  Y  V  K  F  S  *  *  G  C  S  </first_frame>
            <second_frame>  H  V  G  T  Q  N  I  G  P  M  N  A  T  L  E  S  R  G  S  I  V  Q  Q  G  E  T  L  R  A  A  S  P  S  A  Q  S  P  M  H  H  L  P  P  S  P  S  L  I  T  S  N  S  N  Q  V  I  N  S  P  A  E  Q  Y  Q  M  Q  T  S  S  R  S  D  P  R  L  S  Q  I  S  R  R  S  N  L  D  P  R  N  Q  Y  A  Q  E  S  L  T  M  P  S  R  N  T  I  S  V  N  S  Q  R  Q  H  P  P  S  L  Q  N  S  S  A  L  S  S  S  H  Q  L  R  Q  K  V  Q  R  E  S  L  E  S  E  Y  S  V  Q  T  K  N  S  T  V  P  E  I  S  G  F  P  D  P  S  S  T  S  S  L  L  A  A  V  L  K  S  G  V  I  G  N  K  S  S  S  G  T  T  S  S  S  L  D  K  G  A  L </second_frame>
            <third_frame>   M  L  E  R  K  I  L  G  R  *  M  Q  L  W  N  P  G  D  P  *  C  N  R  E  R  L  S  E  L  P  L  P  L  L  S  H  Q  C  I  T  F  L  H  P  H  H  L  *  Q  A  T  V  I  K  *  L  T  V  P  L  S  S  T  R  C  K  P  V  L  V  L  I  Q  D  Y  P  K  S  Q  G  G  Q  I  *  I  L  V  T  S  M  P  R  N  L  *  Q  C  H  L  G  I  P  F  Q  L  I  H  K  D  N  T  L  Q  V  C  R  I  R  L  P  C  L  L  L  I  S  *  D  R  R  F  S  G  K  A  W  N  L  N  I  L  Y  K  P  R  I  Q  Q  F  L  R  F  Q  V  F  L  I  P  L  A  L  A  V  C  W  L  L  F  *  R  V  E  S  L  V  I  N  R  V  L  V  L  R  Q  V  L  L  I  R  V  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0100J12.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85479" stop="86054"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>576</number_coding_nucleotides>
                  <number_encoded_amino_acids>192</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HVGTQNIGPMNATLESRGSIVQQGETLRAASPSAQSPMHHLPPSPSLITSNSNQVINSPAEQYQMQTSSRSDPRLSQISRRSNLDPRNQYAQESLTMPSRNTISVNSQRQHPPSLQNSSALSSSHQLRQKVQRESLESEYSVQTKNSTVPEISGFPDPSSTSSLLAAVLKSGVIGNKSSSGTTSSSLDKGAL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="86124" PGL_stop="86483"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="86124" e_stop="86483"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="86124" e_stop="86483" e_length="360"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86124" stop="86483"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U341234" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCTGTCACTAGTCTATCAATGGACAGAAATGCTTCGAACTCTCCAAATTATTCCCAGAGAAATGTAGAACAGCCACCATTGCCACCTGGTCTGCCTCCAACTCTTGCAGGTACTGCATCATCGCAGACGCCGAATGCACCAAATATTGCTTCCAGTCCTCTTTCAAGTATTTTGAGTACATTGGTGGCGAAGGGGTTAATATCCGCATCAAAGAAGGACCCTCCTATTTATACTCCTTCAGATACACCTCCTCAAACTCAGAACCTTATTCCACCTGCAAGTTCCATTTCAACTCCTGCTTTATCTGCTCCAACATCTTCATCTGTTCCTTCTTCAGCTCATAAGGATGAACTTTCACAC</gDNA_template>
            <first_frame> S  V  T  S  L  S  M  D  R  N  A  S  N  S  P  N  Y  S  Q  R  N  V  E  Q  P  P  L  P  P  G  L  P  P  T  L  A  G  T  A  S  S  Q  T  P  N  A  P  N  I  A  S  S  P  L  S  S  I  L  S  T  L  V  A  K  G  L  I  S  A  S  K  K  D  P  P  I  Y  T  P  S  D  T  P  P  Q  T  Q  N  L  I  P  P  A  S  S  I  S  T  P  A  L  S  A  P  T  S  S  S  V  P  S  S  A  H  K  D  E  L  S  H </first_frame>
            <second_frame>  L  S  L  V  Y  Q  W  T  E  M  L  R  T  L  Q  I  I  P  R  E  M  *  N  S  H  H  C  H  L  V  C  L  Q  L  L  Q  V  L  H  H  R  R  R  R  M  H  Q  I  L  L  P  V  L  F  Q  V  F  *  V  H  W  W  R  R  G  *  Y  P  H  Q  R  R  T  L  L  F  I  L  L  Q  I  H  L  L  K  L  R  T  L  F  H  L  Q  V  P  F  Q  L  L  L  Y  L  L  Q  H  L  H  L  F  L  L  Q  L  I  R  M  N  F  H   </second_frame>
            <third_frame>   C  H  *  S  I  N  G  Q  K  C  F  E  L  S  K  L  F  P  E  K  C  R  T  A  T  I  A  T  W  S  A  S  N  S  C  R  Y  C  I  I  A  D  A  E  C  T  K  Y  C  F  Q  S  S  F  K  Y  F  E  Y  I  G  G  E  G  V  N  I  R  I  K  E  G  P  S  Y  L  Y  S  F  R  Y  T  S  S  N  S  E  P  Y  S  T  C  K  F  H  F  N  S  C  F  I  C  S  N  I  F  I  C  S  F  F  S  S  *  G  *  T  F  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0100J12.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="86124" stop="86483"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>360</number_coding_nucleotides>
                  <number_encoded_amino_acids>120</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SVTSLSMDRNASNSPNYSQRNVEQPPLPPGLPPTLAGTASSQTPNAPNIASSPLSSILSTLVAKGLISASKKDPPIYTPSDTPPQTQNLIPPASSISTPALSAPTSSSVPSSAHKDELSH</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0100J12.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="86135" stop="86467"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>330</number_coding_nucleotides>
                  <number_encoded_amino_acids>110</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SINGQKCFELSKLFPEKCRTATIATWSASNSCRYCIIADAECTKYCFQSSFKYFEYIGGEGVNIRIKEGPSYLYSFRYTSSNSEPYSTCKFHFNSCFICSNIFICSFFSS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="86721" PGL_stop="87855"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="86721" e_stop="87065"/>
            <exon e_start="87706" e_stop="87855"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.923" acc_prob="0.965" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="86721" e_stop="87065" e_length="345"/>
          </exon>
          <intron i_serial="1" don_prob="0.923" acc_prob="0.965">
            <gDNA_intron_boundary i_start="87066" i_stop="87705" i_length="640"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="87706" e_stop="87855" e_length="150"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86721" stop="87065"/>
              <exon start="87706" stop="87855"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U327771" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86907" stop="87065"/>
              <exon start="87706" stop="87855"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U339235" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTGTTGAATAATTCAAGAAAGTGGTATTTAAATTCTGGGGAATGGATTGCTGCATTTGGTGGCCTCCCTTGTGGCGATAAATCTGAAGGGCCAGCTGGAGGTTCTAGTGAGACATCAGAATGTACTGAGACCATGGTTCCTGCAGATGAATGTCAATGTGTGTGTGTTTTGTGTGGTGAGTTTTTTGAAGACTTCTACAATGAAGAAAGTGATGAATGGATGTTCAAAGATGCTGTTTACATGAGTATTCCAAGTGAAAGTGATTGTCAGGGTCCGATAGTCCACAAGAACTGTATTTCAGAAAGTTCTTGTCAAGAGTTGGGGTTTGCCTAGGATATAAAACTG : GTGTTGGATGCTTGATTTTTGTCTCTTAATCGAAGACAACCAGGTTCATTTTGAATTACTTGTAATGATTATACATCTTCTTGCTTAGTAAGCCTCTTCCATGCTTTTGTTTGAAACGACAATGAAATGGAAATTCTAGATACTAGAACA</gDNA_template>
            <first_frame> L  L  N  N  S  R  K  W  Y  L  N  S  G  E  W  I  A  A  F  G  G  L  P  C  G  D  K  S  E  G  P  A  G  G  S  S  E  T  S  E  C  T  E  T  M  V  P  A  D  E  C  Q  C  V  C  V  L  C  G  E  F  F  E  D  F  Y  N  E  E  S  D  E  W  M  F  K  D  A  V  Y  M  S  I  P  S  E  S  D  C  Q  G  P  I  V  H  K  N  C  I  S  E  S  S  C  Q  E  L  G  F  A  *  D  I  K  L  :  V  L  D  A  *  F  L  S  L  N  R  R  Q  P  G  S  F  *  I  T  C  N  D  Y  T  S  S  C  L  V  S  L  F  H  A  F  V  *  N  D  N  E  M  E  I  L  D  T  R  T </first_frame>
            <second_frame>  C  *  I  I  Q  E  S  G  I  *  I  L  G  N  G  L  L  H  L  V  A  S  L  V  A  I  N  L  K  G  Q  L  E  V  L  V  R  H  Q  N  V  L  R  P  W  F  L  Q  M  N  V  N  V  C  V  F  C  V  V  S  F  L  K  T  S  T  M  K  K  V  M  N  G  C  S  K  M  L  F  T  *  V  F  Q  V  K  V  I  V  R  V  R  *  S  T  R  T  V  F  Q  K  V  L  V  K  S  W  G  L  P  R  I  *  N  W :   C  W  M  L  D  F  C  L  L  I  E  D  N  Q  V  H  F  E  L  L  V  M  I  I  H  L  L  A  *  *  A  S  S  M  L  L  F  E  T  T  M  K  W  K  F  *  I  L  E   </second_frame>
            <third_frame>   V  E  *  F  K  K  V  V  F  K  F  W  G  M  D  C  C  I  W  W  P  P  L  W  R  *  I  *  R  A  S  W  R  F  *  *  D  I  R  M  Y  *  D  H  G  S  C  R  *  M  S  M  C  V  C  F  V  W  *  V  F  *  R  L  L  Q  *  R  K  *  *  M  D  V  Q  R  C  C  L  H  E  Y  S  K  *  K  *  L  S  G  S  D  S  P  Q  E  L  Y  F  R  K  F  L  S  R  V  G  V  C  L  G  Y  K  T   : G  V  G  C  L  I  F  V  S  *  S  K  T  T  R  F  I  L  N  Y  L  *  *  L  Y  I  F  L  L  S  K  P  L  P  C  F  C  L  K  R  Q  *  N  G  N  S  R  Y  *  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0100J12.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="86721" stop="87053"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>330</number_coding_nucleotides>
                  <number_encoded_amino_acids>110</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLNNSRKWYLNSGEWIAAFGGLPCGDKSEGPAGGSSETSECTETMVPADECQCVCVLCGEFFEDFYNEESDEWMFKDAVYMSIPSESDCQGPIVHKNCISESSCQELGFA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="87956" PGL_stop="88392"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="87956" e_stop="88392"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="87956" e_stop="88392" e_length="437"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87956" stop="88392"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U340401" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTGAACAAAAATCATCCAGCTGCAATTCTGTTCAAGATCCAACTTATACTTAAGCAAGCTACTGAGTGTGCATTCACTTTGTTAGAACATTAAGGGCTTAAAACTTTTACTAATTGTCTAGAGCCTCGGCAACTTTGTCCCTTTTAAGTTCTCGGACACTTGGACTATCATTGCAACCATATTGTTGGTTTTAGATAATGGATATTCCCAGATTATGATAGAAGTTCTTTGTTTATTGGGATGTAATTTCATTGCCTGTATGTTTATTGCAAGTCCTTGGTTTTTACTTCTAGTAGAAAGTAGGAGGTTCTTGAAGCTGTCGACTGAATGTTCGTTCACATTAGTTGCTGCTCAAGCTGATGAGAACCTTTACATACACAAACATCTGTGGAATTGTTCATTGTGAATTTTTTTTGTGCTCAACATCACAATCCTC</gDNA_template>
            <first_frame> I  E  Q  K  S  S  S  C  N  S  V  Q  D  P  T  Y  T  *  A  S  Y  *  V  C  I  H  F  V  R  T  L  R  A  *  N  F  Y  *  L  S  R  A  S  A  T  L  S  L  L  S  S  R  T  L  G  L  S  L  Q  P  Y  C  W  F  *  I  M  D  I  P  R  L  *  *  K  F  F  V  Y  W  D  V  I  S  L  P  V  C  L  L  Q  V  L  G  F  Y  F  *  *  K  V  G  G  S  *  S  C  R  L  N  V  R  S  H  *  L  L  L  K  L  M  R  T  F  T  Y  T  N  I  C  G  I  V  H  C  E  F  F  L  C  S  T  S  Q  S   </first_frame>
            <second_frame>  L  N  K  N  H  P  A  A  I  L  F  K  I  Q  L  I  L  K  Q  A  T  E  C  A  F  T  L  L  E  H  *  G  L  K  T  F  T  N  C  L  E  P  R  Q  L  C  P  F  *  V  L  G  H  L  D  Y  H  C  N  H  I  V  G  F  R  *  W  I  F  P  D  Y  D  R  S  S  L  F  I  G  M  *  F  H  C  L  Y  V  Y  C  K  S  L  V  F  T  S  S  R  K  *  E  V  L  E  A  V  D  *  M  F  V  H  I  S  C  C  S  S  *  *  E  P  L  H  T  Q  T  S  V  E  L  F  I  V  N  F  F  C  A  Q  H  H  N  P  </second_frame>
            <third_frame>   *  T  K  I  I  Q  L  Q  F  C  S  R  S  N  L  Y  L  S  K  L  L  S  V  H  S  L  C  *  N  I  K  G  L  K  L  L  L  I  V  *  S  L  G  N  F  V  P  F  K  F  S  D  T  W  T  I  I  A  T  I  L  L  V  L  D  N  G  Y  S  Q  I  M  I  E  V  L  C  L  L  G  C  N  F  I  A  C  M  F  I  A  S  P  W  F  L  L  L  V  E  S  R  R  F  L  K  L  S  T  E  C  S  F  T  L  V  A  A  Q  A  D  E  N  L  Y  I  H  K  H  L  W  N  C  S  L  *  I  F  F  V  L  N  I  T  I  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0100J12.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88078" stop="88362"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>282</number_coding_nucleotides>
                  <number_encoded_amino_acids>94</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLGNFVPFKFSDTWTIIATILLVLDNGYSQIMIEVLCLLGCNFIACMFIASPWFLLLVESRRFLKLSTECSFTLVAAQADENLYIHKHLWNCSL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="91857" PGL_stop="90566"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="91857" e_stop="91670"/>
            <exon e_start="91561" e_stop="90566"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.985" acc_prob="0.982" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="91857" e_stop="91670" e_length="188"/>
          </exon>
          <intron i_serial="1" don_prob="0.985" acc_prob="0.982">
            <gDNA_intron_boundary i_start="91669" i_stop="91562" i_length="108"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="91561" e_stop="90566" e_length="996"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91857" stop="91670"/>
              <exon start="91561" stop="90566"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U315672" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTTTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGCAAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAG : AATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAACGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATGTATCATAAGATTGTAGTACTATGTTTTGTGAGAATTATAAAGATAGCCAAAAGTTTAATT</gDNA_template>
            <first_frame> L  F  L  S  L  S  H  P  H  K  D  N  K  K  K  N  F  K  Q  K  K  K  S  I  N  Q  R  Q  K  N  G  A  K  K  Y  F  F  S  S  F  S  Y  G  F  T  T  N  F  L  H  N  N  S  S  F  I  A  N  N  *  F  S  R :   I  *  W  D  Y  *  *  *  S  N  F  L  T  S  T  R  R  F  Q  *  C  K  F  F  L  L  F  S  T  L  I  Y  G  I  *  A  Y  P  N  R  Y  D  Q  *  K  F  I  L  S  I  *  D  F  T  S  F  K  N  K  K  K  L  A  S  E  K  I  L  *  L  V  K  K  I  L  C  *  F  Y  L  A  I  N  Y  Q  N  I  L  F  A  M  N  N  K  A  I  I  S  I  C  F  C  V  *  A  *  *  F  F  S  L  L  I  L  A  S  S  Y  L  N  F  S  F  L  W  K  S  N  F  L  Y  I  R  Y  N  F  F  K  K  N  I  Q  L  I  T  F  H  L  F  R  S  *  E  I  K  R  G  S  I  *  I  F  S  S  K  K  Y  G  K  N  N  F  F  C  T  Y  I  N  C  *  I  V  *  I  L  H  I  T  S  K  N  I  Y  R  V  I  K  F  F  F  V  F  S  L  I  H  L  L  *  F  L  S  S  D  F  K  N  S  Y  I  R  L  *  L  R  I  D  F  F  Y  *  N  S  S  W  E  *  K  N  V  K  K  K  M  K  F  V  S  R  E  E  *  L  Q  R  L  I  *  I  I  F  I  L  N  T  S  Q  N  I  E  Q  V  Y  I  N  I  I  F  F  L  K  D  G  *  L  V  M  F  F  S  I  L  *  I  I  V  Q  R  T  K  R  N  F  N  L  L  K  L  V  F  R  C  I  I  R  L  *  Y  Y  V  L  *  E  L  *  R  *  P  K  V  *   </first_frame>
            <second_frame>  F  F  S  L  S  L  I  L  T  K  T  I  K  R  R  I  L  S  K  K  K  N  Q  *  I  K  G  K  K  M  E  Q  K  N  I  F  F  L  L  S  L  M  V  L  L  L  I  S  Y  T  T  T  A  R  L  L  P  T  I  N  S  Q   : E  S  N  G  I  I  S  N  N  P  I  S  S  Q  V  Q  E  D  F  N  D  V  S  S  F  S  Y  F  P  P  L  Y  T  V  Y  E  L  I  R  I  D  M  I  S  E  N  S  Y  Y  R  F  E  I  S  L  L  S  K  T  K  K  N  *  L  V  R  R  F  C  N  *  *  K  K  F  F  V  N  S  I  *  R  *  I  I  K  I  F  C  L  L  *  I  I  K  Q  *  F  Q  F  V  F  V  F  R  P  S  N  F  L  A  Y  *  F  *  L  A  R  I  *  I  F  L  F  Y  G  K  V  I  F  Y  I  Y  D  I  I  F  L  K  K  I  F  S  *  S  P  F  I  Y  F  G  V  K  R  *  K  G  V  Q  F  K  Y  F  L  P  K  S  M  A  K  I  I  F  F  V  H  I  *  I  V  E  S  S  R  Y  Y  I  *  L  L  R  I  Y  I  E  *  *  N  F  F  L  Y  F  L  *  Y  T  Y  Y  N  F  *  A  P  I  L  K  I  H  I  Y  D  S  N  F  E  L  I  F  F  I  E  I  A  H  G  N  R  R  M  *  R  K  R  *  N  L  F  Q  E  K  N  D  C  R  G  S  F  R  L  Y  L  Y  S  T  Q  A  K  T  L  N  K  F  I  L  I  L  F  F  F  L  R  M  V  N  *  *  C  S  F  L  Y  F  K  L  *  Y  N  V  L  K  E  T  L  I  Y  *  N  L  Y  F  D  V  S  *  D  C  S  T  M  F  C  E  N  Y  K  D  S  Q  K  F  N  </second_frame>
            <third_frame>   F  S  L  S  L  S  S  S  Q  R  Q  *  K  E  E  F  *  A  K  K  K  I  N  K  S  K  A  K  K  W  S  K  K  I  F  F  F  F  F  L  L  W  F  Y  Y  *  F  P  T  Q  Q  Q  L  V  Y  C  Q  Q  L  I  L  K  :  N  L  M  G  L  L  V  I  I  Q  F  P  H  K  Y  K  K  I  S  M  M  *  V  L  S  L  I  F  H  P  Y  I  R  Y  M  S  L  S  E  S  I  *  S  V  K  I  H  I  I  D  L  R  F  H  F  F  Q  K  Q  K  K  I  S  *  *  E  D  F  V  I  S  K  K  N  S  L  L  I  L  F  S  D  K  L  S  K  Y  F  V  C  Y  E  *  *  S  N  N  F  N  L  F  L  C  L  G  L  V  I  F  *  P  I  D  F  S  *  L  V  F  E  F  F  F  F  M  E  K  *  F  F  I  Y  T  I  *  F  F  *  K  K  Y  S  V  D  H  L  S  F  I  S  E  L  R  D  K  K  G  F  N  L  N  I  F  F  Q  K  V  W  Q  K  *  F  F  L  Y  I  Y  K  L  L  N  R  L  D  I  T  Y  N  F  *  E  Y  I  *  S  N  K  I  F  F  C  I  F  F  N  T  L  I  I  I  F  E  L  R  F  *  K  F  I  Y  T  T  L  T  S  N  *  F  F  L  L  K  *  L  M  G  I  E  E  C  E  E  K  D  E  I  C  F  K  R  R  M  T  A  E  A  H  L  D  Y  I  Y  T  Q  H  K  P  K  H  *  T  S  L  Y  *  Y  Y  F  F  S  *  G  W  L  I  S  N  V  L  F  Y  T  L  N  Y  S  T  T  Y  *  K  K  L  *  F  I  K  T  C  I  S  M  Y  H  K  I  V  V  L  C  F  V  R  I  I  K  I  A  K  S  L  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0100J12.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="91784" stop="91670"/>
                    <exon start="91561" stop="91374"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>300</number_coding_nucleotides>
                  <number_encoded_amino_acids>100</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IKGKKMEQKNIFFLLSLMVLLLISYTTTARLLPTINSQESNGIISNNPISSQVQEDFNDVSSFSYFPPLYTVYELIRIDMISENSYYRFEISLLSKTKKN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="103025" PGL_stop="103823"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="103025" e_stop="103823"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.976"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.976">
            <gDNA_exon_boundary e_start="103025" e_stop="103823" e_length="799"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103025" stop="103823"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U339986" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CATCTCCGCCGCCGGCCACCGCAGATCCACCATGGACGACGGCGACCGAAGAGCACTAGATCTAGTGAAAGAGCTAGTACACCGCTTACTTTCCACTTCTACGCCGCCCTCCACCGCCGACTCCCACCAGTCCACTATCTTAAACCCTAACCCTGTCATACCTTCCGATCAACAGTATCACCAAGCGCTAAGATACGCCATTCGCATACTCTCCAGTCGAATGACACCTTCAATTGCTGCGGATGAGTCCGCAATGGTGGAATCCATTAAGCGACGGTTAGCTACTCAAGGTAAATCGTCTGATGCCTTAACTTTTGCTGATGTATATACCAAATTCTCGTTGAAAACAGGACAGGGTAGTGTAAGAAACAAATGGGCTGTTCTTTATTTGCTTAAAACCGTCTCCGAAGATCGGAAAATTCAAAAACACCAGTCTGCTTCTGTAGCACCTAACGGGTTTCTTAGCTCTGCATTGTCGGGTGGTTTACCGGAATTGGTTGGTAGTGAATCGAATCGTAATTTCGGGCTCAGAAATGATAGTTCTAAGGTTTTGAATAATGTGCAGGGTAACATGGATAATAGTAAGGATTCTAGGGGTTTGGTGGGTAAATTGGGTAAAATGGAGAAAGGCTATAGTGATCGTAGTCTGAGTGATGATTTTCAGAGTTTGAATTGTGTAGGTGATAATTCGAGAGTTTTGAGGGGTAAAGGTGAAGTAGGGAAGGGATGGAGTGGAGGGGTTTTGATGGTTTCCAAGGATCCGGAGAACTTACGTGATATGGCGTATAAGGAGTTTGTA</gDNA_template>
            <first_frame> H  L  R  R  R  P  P  Q  I  H  H  G  R  R  R  P  K  S  T  R  S  S  E  R  A  S  T  P  L  T  F  H  F  Y  A  A  L  H  R  R  L  P  P  V  H  Y  L  K  P  *  P  C  H  T  F  R  S  T  V  S  P  S  A  K  I  R  H  S  H  T  L  Q  S  N  D  T  F  N  C  C  G  *  V  R  N  G  G  I  H  *  A  T  V  S  Y  S  R  *  I  V  *  C  L  N  F  C  *  C  I  Y  Q  I  L  V  E  N  R  T  G  *  C  K  K  Q  M  G  C  S  L  F  A  *  N  R  L  R  R  S  E  N  S  K  T  P  V  C  F  C  S  T  *  R  V  S  *  L  C  I  V  G  W  F  T  G  I  G  W  *  *  I  E  S  *  F  R  A  Q  K  *  *  F  *  G  F  E  *  C  A  G  *  H  G  *  *  *  G  F  *  G  F  G  G  *  I  G  *  N  G  E  R  L  *  *  S  *  S  E  *  *  F  S  E  F  E  L  C  R  *  *  F  E  S  F  E  G  *  R  *  S  R  E  G  M  E  W  R  G  F  D  G  F  Q  G  S  G  E  L  T  *  Y  G  V  *  G  V  C  </first_frame>
            <second_frame>  I  S  A  A  G  H  R  R  S  T  M  D  D  G  D  R  R  A  L  D  L  V  K  E  L  V  H  R  L  L  S  T  S  T  P  P  S  T  A  D  S  H  Q  S  T  I  L  N  P  N  P  V  I  P  S  D  Q  Q  Y  H  Q  A  L  R  Y  A  I  R  I  L  S  S  R  M  T  P  S  I  A  A  D  E  S  A  M  V  E  S  I  K  R  R  L  A  T  Q  G  K  S  S  D  A  L  T  F  A  D  V  Y  T  K  F  S  L  K  T  G  Q  G  S  V  R  N  K  W  A  V  L  Y  L  L  K  T  V  S  E  D  R  K  I  Q  K  H  Q  S  A  S  V  A  P  N  G  F  L  S  S  A  L  S  G  G  L  P  E  L  V  G  S  E  S  N  R  N  F  G  L  R  N  D  S  S  K  V  L  N  N  V  Q  G  N  M  D  N  S  K  D  S  R  G  L  V  G  K  L  G  K  M  E  K  G  Y  S  D  R  S  L  S  D  D  F  Q  S  L  N  C  V  G  D  N  S  R  V  L  R  G  K  G  E  V  G  K  G  W  S  G  G  V  L  M  V  S  K  D  P  E  N  L  R  D  M  A  Y  K  E  F  V </second_frame>
            <third_frame>   S  P  P  P  A  T  A  D  P  P  W  T  T  A  T  E  E  H  *  I  *  *  K  S  *  Y  T  A  Y  F  P  L  L  R  R  P  P  P  P  T  P  T  S  P  L  S  *  T  L  T  L  S  Y  L  P  I  N  S  I  T  K  R  *  D  T  P  F  A  Y  S  P  V  E  *  H  L  Q  L  L  R  M  S  P  Q  W  W  N  P  L  S  D  G  *  L  L  K  V  N  R  L  M  P  *  L  L  L  M  Y  I  P  N  S  R  *  K  Q  D  R  V  V  *  E  T  N  G  L  F  F  I  C  L  K  P  S  P  K  I  G  K  F  K  N  T  S  L  L  L  *  H  L  T  G  F  L  A  L  H  C  R  V  V  Y  R  N  W  L  V  V  N  R  I  V  I  S  G  S  E  M  I  V  L  R  F  *  I  M  C  R  V  T  W  I  I  V  R  I  L  G  V  W  W  V  N  W  V  K  W  R  K  A  I  V  I  V  V  *  V  M  I  F  R  V  *  I  V  *  V  I  I  R  E  F  *  G  V  K  V  K  *  G  R  D  G  V  E  G  F  *  W  F  P  R  I  R  R  T  Y  V  I  W  R  I  R  S  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0100J12.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="103026" stop="103823"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>798</number_coding_nucleotides>
                  <number_encoded_amino_acids>266</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ISAAGHRRSTMDDGDRRALDLVKELVHRLLSTSTPPSTADSHQSTILNPNPVIPSDQQYHQALRYAIRILSSRMTPSIAADESAMVESIKRRLATQGKSSDALTFADVYTKFSLKTGQGSVRNKWAVLYLLKTVSEDRKIQKHQSASVAPNGFLSSALSGGLPELVGSESNRNFGLRNDSSKVLNNVQGNMDNSKDSRGLVGKLGKMEKGYSDRSLSDDFQSLNCVGDNSRVLRGKGEVGKGWSGGVLMVSKDPENLRDMAYKEFV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="104230" PGL_stop="104659"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="104230" e_stop="104659"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="104230" e_stop="104659" e_length="430"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104230" stop="104659"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U342359" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAGTTTGGTTTGCTGAGCCAATTGTGAAGATGAGATTGATGGCTGTTTTAGTTGATAACTGTAAGAGCTTAAAGGGTGGGGCAATGGCTGGTGCAATTCACATGCATGCTCAGCATGGTGATCCACTCGTTAATGATTTTATGAAGAGGTTATTGCGTCGGGTGTGTTCCCCTCTTTTTGAGATGGTGAGGAGATGGGTGCTTGAAGGAGAACTTGAAGATATATTTGCTGAGTTTTTCATTGTGAGTCAACCTGTAAAAGACGAGTCTCTTTGGAGAGAAGGTTACCGGCTTCATGCTGCCATGCTTCCTGCTTTTATTTCCCAGTCTCTTGCCAAACAGATATTAAGGACTGGTAAATCAATTAACTTTCTCAGAGTTTGTTGTGATGATCGTGGTTGGGCTGATGCTGCAACAGAAGCAGCAGCAGC</gDNA_template>
            <first_frame> Q  F  G  L  L  S  Q  L  *  R  *  D  *  W  L  F  *  L  I  T  V  R  A  *  R  V  G  Q  W  L  V  Q  F  T  C  M  L  S  M  V  I  H  S  L  M  I  L  *  R  G  Y  C  V  G  C  V  P  L  F  L  R  W  *  G  D  G  C  L  K  E  N  L  K  I  Y  L  L  S  F  S  L  *  V  N  L  *  K  T  S  L  F  G  E  K  V  T  G  F  M  L  P  C  F  L  L  L  F  P  S  L  L  P  N  R  Y  *  G  L  V  N  Q  L  T  F  S  E  F  V  V  M  I  V  V  G  L  M  L  Q  Q  K  Q  Q  Q  </first_frame>
            <second_frame>  S  L  V  C  *  A  N  C  E  D  E  I  D  G  C  F  S  *  *  L  *  E  L  K  G  W  G  N  G  W  C  N  S  H  A  C  S  A  W  *  S  T  R  *  *  F  Y  E  E  V  I  A  S  G  V  F  P  S  F  *  D  G  E  E  M  G  A  *  R  R  T  *  R  Y  I  C  *  V  F  H  C  E  S  T  C  K  R  R  V  S  L  E  R  R  L  P  A  S  C  C  H  A  S  C  F  Y  F  P  V  S  C  Q  T  D  I  K  D  W  *  I  N  *  L  S  Q  S  L  L  *  *  S  W  L  G  *  C  C  N  R  S  S  S  S </second_frame>
            <third_frame>   V  W  F  A  E  P  I  V  K  M  R  L  M  A  V  L  V  D  N  C  K  S  L  K  G  G  A  M  A  G  A  I  H  M  H  A  Q  H  G  D  P  L  V  N  D  F  M  K  R  L  L  R  R  V  C  S  P  L  F  E  M  V  R  R  W  V  L  E  G  E  L  E  D  I  F  A  E  F  F  I  V  S  Q  P  V  K  D  E  S  L  W  R  E  G  Y  R  L  H  A  A  M  L  P  A  F  I  S  Q  S  L  A  K  Q  I  L  R  T  G  K  S  I  N  F  L  R  V  C  C  D  D  R  G  W  A  D  A  A  T  E  A  A  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0100J12.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="104232" stop="104657"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>426</number_coding_nucleotides>
                  <number_encoded_amino_acids>142</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VWFAEPIVKMRLMAVLVDNCKSLKGGAMAGAIHMHAQHGDPLVNDFMKRLLRRVCSPLFEMVRRWVLEGELEDIFAEFFIVSQPVKDESLWREGYRLHAAMLPAFISQSLAKQILRTGKSINFLRVCCDDRGWADAATEAAA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 31 chains have been computed
$ 
$ memory statistics:
$ 79312 bytes spliced alignments in total
$ 18 spliced alignments have been stored
$ 4406 bytes was the average size of a spliced alignment
$ 23808 bytes predicted gene locations in total
$ 15 predicted gene locations have been stored
$ 1587 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 39 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-18 02:30:54
-->
