<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-02-02 15:47:50"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U328085" ref_strand="+" ref_description="SGN-U328085        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | complex 1 family protein / LVR family protein, contains Pfam PF05347: Complex 1 protein (LYR family) | chr2:16576547-16577627 FORWARD | Aliases: None(evalue: 6e-27, score=117) genbank/nr: gi|18405143|ref|NP_565912.1| expressed protein [Arabidopsis thaliana] gi|17380728|gb|AAL36194.1| unknown protein [Arabidopsis thaliana] gi|20196975|gb|AAM14851.1| Expressed protein [Arabidopsis thaliana] gi|20259013|gb|AAM14222.1| unknown protein [Arabidopsis thaliana] gi|21593894|gb|AAM65861.1| unknown [Arabidopsis thaliana](evalue: 4e-25, score=117)">
      <seq>tcgagtttttttgtaggaatccgcaagtgtttaatcgggtatctgtccctgctcgtcctgaagatgcaatgggagcttccagtggaccaaagcggctatctggtatgcagaagcaagcacttgctctatatagaggattcttaagagcagcccgctccaagcctgctgaagaaaggaggcaaatcgagtcagttgtatccactgagttccgcaaaaactccaagcaagttgatcgtaagaatttcatttatatcgagtacttacttcgtcgtggtaacaaacaacttgatcaactcaaaagccctgatactgttggattgtcatcattaagtgttgattcttcacaaacaacaggttcatcctcctcctagattttgtaaagaaaccactctttttttcaactattacaatgagttggttgattatataacatctcttttgctgggattatcatactgagtatactagtattcagaaacatttatatggtgttaaaagaggattttcatcgaggctcgagagatggaatagattacatttacgtttcttcaataaaaattcaagctcgacttgatagtgtaaaaattctttacaagcatatcctatgattgaatgatagtttttgtaatagtagattgtttcataaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0157E03.1" temp_strand="-" temp_description="C09HBa0157E03.1  AC234414.1 htgs_phase:1 submitted_to_sgn_as:gnl|gbrgsp|C09HBa0157E03 upload_account_name:spain (1 - 93835)">
        <position start="7978" stop="6733"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7678" g_stop="7030" g_length="649"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="649" r_length="649" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0157E03.1" gen_strand="-" ref_id="SGN-U328085" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>649</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0157E03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U328085" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7678" e_stop="7030"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAGTTTTTTTGTAGGAATCCGCAAGTGTTTAATCGGGTATCTGTCCCTGCTCGTCCTGAAGATGCAATGGGAGCTTCCAGTGGACCAAAGCGGCTATCTGGTATGCAGAAGCAAGCACTTGCTCTATATAGAGGATTCTTAAGAGCAGCCCGCTCCAAGCCTGCTGAAGAAAGGAGGCAAATCGAGTCAGTTGTATCCACTGAGTTCCGCAAAAACTCCAAGCAAGTTGATCGTAAGAATTTCATTTATATCGAGTACTTACTTCGTCGTGGTAACAAACAACTTGATCAACTCAAAAGCCCTGATACTGTTGGATTGTCATCATTAAGTGTTGATTCTTCACAAACAACAGGTTCATCCTCCTCCTAGATTTTGTAAAGAAACCACTCTTTTTTTCAACTATTACAATGAGTTGGTTGATTATATAACATCTCTTTTGCTGGGATTATCATACTGAGTATACTAGTATTCAGAAACATTTATATGGTGTTAAAAGAGGATTTTCATCGAGGCTCGAGAGATGGAATAGATTACATTTACGTTTCTTCAATAAAAATTCAAGCTCGACTTGATAGTGTAAAAATTCTTTACAAGCATATCCTATGATTGAATGATAGTTTTTGTAATAGTAGATTGTTTCATAATGT</genome_strand>
        <mrna_strand>TCGAGTTTTTTTGTAGGAATCCGCAAGTGTTTAATCGGGTATCTGTCCCTGCTCGTCCTGAAGATGCAATGGGAGCTTCCAGTGGACCAAAGCGGCTATCTGGTATGCAGAAGCAAGCACTTGCTCTATATAGAGGATTCTTAAGAGCAGCCCGCTCCAAGCCTGCTGAAGAAAGGAGGCAAATCGAGTCAGTTGTATCCACTGAGTTCCGCAAAAACTCCAAGCAAGTTGATCGTAAGAATTTCATTTATATCGAGTACTTACTTCGTCGTGGTAACAAACAACTTGATCAACTCAAAAGCCCTGATACTGTTGGATTGTCATCATTAAGTGTTGATTCTTCACAAACAACAGGTTCATCCTCCTCCTAGATTTTGTAAAGAAACCACTCTTTTTTTCAACTATTACAATGAGTTGGTTGATTATATAACATCTCTTTTGCTGGGATTATCATACTGAGTATACTAGTATTCAGAAACATTTATATGGTGTTAAAAGAGGATTTTCATCGAGGCTCGAGAGATGGAATAGATTACATTTACGTTTCTTCAATAAAAATTCAAGCTCGACTTGATAGTGTAAAAATTCTTTACAAGCATATCCTATGATTGAATGATAGTTTTTGTAATAGTAGATTGTTTCATAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U342554" ref_strand="+" ref_description="SGN-U342554        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>gaatttctaccttttcgacggcgcaatacacaaaggtatgccatggtttccgtttagccatacattttgaagttgaaatttgaaattttgtgttttcgatattgtgattttttggaacttgatgttatatttgaacgtataatttttgggattttgtgaatggaagtgtaattattccctaaaactgttgaaaatctgatctaatttcacgatgaaacaagtatttgaagataaaattttcaaattctgattcaaaatgtagggggaaagctagctagaatttgattgactggatgcagtacatatcctgaaccagatctagattataacaaataaatttatgtaatcagtaatttttctaagattcgtaaataggaaggtttggaaattgattatcagagccgatagttagtaagtagtcgagtgttgttgtgtgggagaggtaggaagctagcctcatcccctccccttctagtagtagttntagttcgatgctatcagctaattgtgctatcgtaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0157E03.1" temp_strand="-" temp_description="C09HBa0157E03.1  AC234414.1 htgs_phase:1 submitted_to_sgn_as:gnl|gbrgsp|C09HBa0157E03 upload_account_name:spain (1 - 93835)">
        <position start="9763" stop="8659"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9478" g_stop="8959" g_length="520"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="520" r_length="520" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0157E03.1" gen_strand="-" ref_id="SGN-U342554" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>520</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0157E03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U342554" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9478" e_stop="8959"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATTTCTACCTCAACGACGGCGCAATACACAAAGGTATGCCATTTTTTCCGTTTAGCCATACATTTTGAAGTTGAAATTTGAAATTTTGTGTTTTCGATATTGTGATTTTTTGGAACTTGATGTTATATTTGAACGTATAATTTTTGGGATTTTGTGAATGGAAGTGTAATTATTCCCTAAAACTGTTGAAAATCTGATCTAATTTCACGATGAAACAAGTATTTGAAGATAAAATTTTCAAATTCTGATTCAAAATGTAGGGGGAAAGCTAGCTAGAATTTGATTGACTGGATGCAGTACATATCCTGAACCAGATCTAGATTATAACAAATAAATTTATGTAATCAGTAATTTTTCTAAGATTCGTAAATAGGAAGGTTTGGAAATTGATTATCAGAGCCGATAGTTAGTAAGTAGTCGAGTGTTGTTGTGTGGGAGAGGTAGGAAGCTAGCCTCATCCCCTCCCCTTCTAGTAGTAGTTTTAGTTCGATGCTATCAGCTAATTGTGCTATCGTAAT</genome_strand>
        <mrna_strand>GAATTTCTACCTTTTCGACGGCGCAATACACAAAGGTATGCCATGGTTTCCGTTTAGCCATACATTTTGAAGTTGAAATTTGAAATTTTGTGTTTTCGATATTGTGATTTTTTGGAACTTGATGTTATATTTGAACGTATAATTTTTGGGATTTTGTGAATGGAAGTGTAATTATTCCCTAAAACTGTTGAAAATCTGATCTAATTTCACGATGAAACAAGTATTTGAAGATAAAATTTTCAAATTCTGATTCAAAATGTAGGGGGAAAGCTAGCTAGAATTTGATTGACTGGATGCAGTACATATCCTGAACCAGATCTAGATTATAACAAATAAATTTATGTAATCAGTAATTTTTCTAAGATTCGTAAATAGGAAGGTTTGGAAATTGATTATCAGAGCCGATAGTTAGTAAGTAGTCGAGTGTTGTTGTGTGGGAGAGGTAGGAAGCTAGCCTCATCCCCTCCCCTTCTAGTAGTAGTTNTAGTTCGATGCTATCAGCTAATTGTGCTATCGTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U330421" ref_strand="+" ref_description="SGN-U330421        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | zinc finger (C3HC4-type RING finger) family protein, contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger) | chr5:620092-621177 FORWARD | Aliases: F9G14.60, F9G14_60(evalue: 6e-43, score=171) genbank/nr: gi|7413550|emb|CAB86029.1| putative protein [Arabidopsis thaliana] (evalue: 4e-41, score=171)">
      <seq>tctaaactagcaattttcactcatttcatgcataatgatacaatcatgccaccaccatcaaccacctctatgaaacaccgcgatttagacgcggttctcctcctcctccttctatgtgaactacgtcaacatgatcccgaagcactcgatctacctccatcaaggtggcgcgttgttatttgtcaatacatagctaaagatgcactaaaattctctagcattagttgttccaacagagaaatcataatgaagtttattgatttgctagcaaagtgcaagaactttgtcaaggccatgattcatgcaggtgatggtattggaggaaaagatcggaaggaggtggcaacatcgatagcgacaatagtagcactaccatcagtagaagcgagcaacgacgacaatgacgggaggaaggaatgtgttatatgtaaagaagagatgaaagaaggaagagatgtttgtaaattgccatgtcatcatacatttcattggatatgtatattgccttggttgaaaaaaaggaacacgtgtccatgttgtcgatatcagctaccgtccgatgatgtttacgctgagatccaacggttgtgggaagttgtggccaagatgagtgatagtgcaaattttgtacgaattagtaattgtaattagtttttaattaagtaaaattaatcttatagaattagcataatataggtacttatgttttttttcttctccagttataatataaaacactacatttatcatatgttttatatncatactatatacattatcaattaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0157E03.1" temp_strand="-" temp_description="C09HBa0157E03.1  AC234414.1 htgs_phase:1 submitted_to_sgn_as:gnl|gbrgsp|C09HBa0157E03 upload_account_name:spain (1 - 93835)">
        <position start="13083" stop="10314"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12783" g_stop="12620" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="164" r_length="164" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12619" i_stop="12464" i_length="156">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12463" g_stop="12321" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="165" r_stop="307" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12320" i_stop="11095" i_length="1226">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11094" g_stop="10609" g_length="486"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="792" r_length="485" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0157E03.1" gen_strand="-" ref_id="SGN-U330421" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>793</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0157E03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U330421" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12783" e_stop="12620"/>
          <exon e_start="12463" e_stop="12321"/>
          <exon e_start="11094" e_stop="10609"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTAAACTAGCAATTTTCACTCATTTCATGCATAATGATACAATCATGCCACCACCATCAACCACCTCTATGAAACACCGCGATTTAGACGCGGTTCTCCTCCTCCTCCTTCTATGTGAACTACGTCAACATGATCCCGAAGCACTCGATCTACCTCCATCAAGGTACGTGTTAGATAGTTTGTAGTATATATATATGTTTAATCATTTTTTAAAACAATAAAAATTGTTATTGGTTATAAAAACCTATAGATCTTTTGTCATTCTATAATATCTCTTTAACGATAGTGATTCTTTATCTATTTATTTTTATCCTAACAGGTGGCGCGTTGTTATTTGTCAATACATAGCTAAAGATGCACTAAAATTCTCTAGCATTAGTTGTTCCAACAGAGAAATCATAATGAAGTTTATTGATTTGCTAGCAAAGTGCAAGAACTTTGTCAAGGCCATGATTCATGCAGGTATATTATGTATAGTGGCATATACATGTTTCTTTAATGAAAAAATGGATTCTATTGAATTCGTCGGGTATTTTTACATTATCGGATCATTTTAATCTGTTACATTGTAATCGAGAGGTGATTATTGATCTGTCTTATTTTCAACATTACAAATAAGAAAGCTTGCTTGTAGGTATATTTTTTGGGTGGATAGATAACATGATACTTGATAGTGTAAAATAATAATCTTGATTGAATTGTGTGTAGAACCAAAACGAACTATTTCTATTCTCGAAAATGAGATATATGAAGTATAGCTTTTTGGTCCTATTCATCCAATGGTTAAGTTGTCATTGGTTTTATTTTATGTCGAAGACACGAGTCTGATTCTCATAAGACATAATTAGTACTCATTTTTTTGGGGTTCATGTAAATTATGGTCAATACTAGATATATATATATATATATATATATATATATATATATATATAACCAATGATTCAAATTCATAGGTTAATTGTACTTTGGCAATTTAACATAAAGTAGAGTTTGATTTTCTTCGGTTGATAGTGAAAGAGTTGACAAGTAAGTCACCTTACTACTACTCCGCAAAACTCTACATGAGATTTTCACTTCATACGACTTCTCATCCAATTCTTTCAAATTCATTGCATCCTTTTTCATGTTCGAGAATCCTTTTCCTTCCACTTTGCTCTGAAGAGTAACTAGGACCAATTTAATTACTTTACATTAGTATTTACTATTTACTGATGAATGATTGCTCGTTATCTGGTTGGAAAATATGGTCCAAAGTCTTGATTTAATTTAATGGTATTAACTAATAATTATATTATAAATTAAAGGGATAATGTCCAAGTACCCCCTCAAACTATGCCCGAAATCTCAGAGACACACTTATACTATACTAAGGTCCTATTACCCTCTGAACTTATTTTATTAATAATTTTTTACTCCTTTTTAGCTTACGTGGCACTATCTTGTGGGCCCAACGATGGTTGACTTTTTCTTTTGAACTAGTGCCACGTAGGATAAAAAGGGGTAGAAAATTACATATAAAATAAGTTCAGGGAGGTAATAGGACCTTAGTATAGTATAAGTGTGTCTCTGGGATTTCGGGCATAGGTTGAGGGGGTACTTGGTTATTTTCCCTAAATTAAACCTCATAGTTTCAAATAACTCAGAACTTTAGATATACATATTAAATCTTGAATCCACTTCTAATGCAGGTGATGGTATTGGAGGAAAAGATCGGAAGGAGGTGGCAACATCGATAGCGACAATAGTAGCACTACCATCAGTAGAAGCGAGCAACGACGACAATGACGGGAGGAAGGAATGTGTTATATGTAAAGAAGAGATGAAAGAAGGAAGAGATGTTTGTAAATTGCCATGTCATCATACATTTCATTGGATATGTATATTGCCTTGGTTGAAAAAAAGGAACACGTGTCCATGTTGTCGATATCAGCTACCGTCCGATGATGTTTACGCTGAGATCCAACGGTTGTGGGAAGTTGTGGCCAAGATGAGTGATAGTGCAAATTTTGTAGGAATTAGTAATTGTAATTAGTTTTTAATTAAGTAAAATTAATCTTATAGAATTAGCATAATATAGTTACTTATGTTTTTTTTCTTCTCCAAGTTATAATATAAAACACTACATTTATCATATGTTTTATATCAATACTATATACATTATCAATTATACCTCA</genome_strand>
        <mrna_strand>TCTAAACTAGCAATTTTCACTCATTTCATGCATAATGATACAATCATGCCACCACCATCAACCACCTCTATGAAACACCGCGATTTAGACGCGGTTCTCCTCCTCCTCCTTCTATGTGAACTACGTCAACATGATCCCGAAGCACTCGATCTACCTCCATCAAG............................................................................................................................................................GTGGCGCGTTGTTATTTGTCAATACATAGCTAAAGATGCACTAAAATTCTCTAGCATTAGTTGTTCCAACAGAGAAATCATAATGAAGTTTATTGATTTGCTAGCAAAGTGCAAGAACTTTGTCAAGGCCATGATTCATGCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGGTATTGGAGGAAAAGATCGGAAGGAGGTGGCAACATCGATAGCGACAATAGTAGCACTACCATCAGTAGAAGCGAGCAACGACGACAATGACGGGAGGAAGGAATGTGTTATATGTAAAGAAGAGATGAAAGAAGGAAGAGATGTTTGTAAATTGCCATGTCATCATACATTTCATTGGATATGTATATTGCCTTGGTTGAAAAAAAGGAACACGTGTCCATGTTGTCGATATCAGCTACCGTCCGATGATGTTTACGCTGAGATCCAACGGTTGTGGGAAGTTGTGGCCAAGATGAGTGATAGTGCAAATTTTGTACGAATTAGTAATTGTAATTAGTTTTTAATTAAGTAAAATTAATCTTATAGAATTAGCATAATATAGGTACTTATGTTTTTTTTCTTCTCC-AGTTATAATATAAAACACTACATTTATCATATGTTTTATATNCATACTATATACATTATCAATTAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U339657" ref_strand="+" ref_description="SGN-U339657        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | kinesin motor protein-related, kinesin-related protein TKRP125, Nicotiana tabacum, PIR:T02017 | chr3:16866597-16871935 REVERSE | Aliases: F16L2.60(evalue: 1e-34, score=143) genbank/nr: gi|15231259|ref|NP_190171.1| kinesin-related protein [Arabidopsis thaliana] gi|11276945|pir||T47525 kinesin-related protein-like - Arabidopsis thaliana gi|7339486|emb|CAB82809.1| kinesin-related protein-like [Arabidopsis thaliana](evalue: 9e-33, score=143)">
      <seq>aatgaccttagagagtgctctaatatcaaaaccagaaatctaaatgctgagttctcaaacatacaagattgtgctaattctgcctatgaagagtggacaaactacattggaagcacagaagcccatcatatcgaggattcaactagattggaattttggaaaagtagcctagcaggaaacatctattgctgcttaacaaaatcaaaggggatcgaagatggatggagaaatgcccaagaatcccttcattcccaagaaacaagaaccatcaactcagtcgattctattgttaagagtgctatggaatctaatggaaagatcggctctcaattttcctccaccgtgacttccatactagaagaaacatctatttccaagaggaatcttctttttgttatggaaagtttgctgaaacttgatcatgatgaatgtgagaagatctgttcacttattcatccttgtgttgaggatatgaaacagatgaaagacagtcattcatccgaagtatcagagatagcggaaaatgcaggaaaagtattgacagatgagtataaggttaaagctcagaaaactatgcaagtattttttgattaaaactaaaaagcataatactcaaattcacacaatgctattacaatctgtatttctgaacggntaaaatttctctcttcatcattcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0157E03.1" temp_strand="-" temp_description="C09HBa0157E03.1  AC234414.1 htgs_phase:1 submitted_to_sgn_as:gnl|gbrgsp|C09HBa0157E03 upload_account_name:spain (1 - 93835)">
        <position start="25251" stop="23695"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24951" g_stop="24761" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="191" r_length="191" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24760" i_stop="24661" i_length="100">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24660" g_stop="24559" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="293" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24558" i_stop="24486" i_length="73">
            <donor d_prob="0.782" d_score="1.00"/>
            <acceptor a_prob="0.923" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24485" g_stop="24376" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="403" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24375" i_stop="24278" i_length="98">
            <donor d_prob="0.608" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24277" g_stop="23992" g_length="286"/>
          <reference_exon_boundary r_type="cDNA" r_start="404" r_stop="688" r_length="285" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0157E03.1" gen_strand="-" ref_id="SGN-U339657" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>689</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0157E03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U339657" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24951" e_stop="24761"/>
          <exon e_start="24660" e_stop="24559"/>
          <exon e_start="24485" e_stop="24376"/>
          <exon e_start="24277" e_stop="23992"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGACCTTAGAGAGTGCTCTAATATCAAAACCAGAAATCTAAATGCTGAGTTCTCAAACATACAAGATTGTGCTAATTCTGCCTATGAAGAGTGGACAAACTACATTGAAAGCACAGAAGCCCATCATATCGAGGATTCAACTAGATTGGAATTTTGGAAAAGTAGCCTAGCAGGAAACATCTATTGCTGGTTGAGTTGGTTTCGATGATATAAAATTTATAAATATTGCACTGTATTTTGCATTGTATACCTTTAGTCAAGCTATTATATTTCTCATCTTGAATTTCAGCTTAACAAAATCAAAGGGGATCGAAGATGGATGGAGAAATGCCCAAGAATCCCTTCATTCCCAAGAAACAAGAACCATCAACTCAGTCGATTCTATTGTTAAGTGAGTTATCATTTTCAGATGAATCAACTACCATCTGAGGACTTTTTTTACATTTTTACCTCGATATGTTCAGGAGTGCTATGGAATCTAATGGAAAGATCGGCTCTCAATTTTCCTCCACCGTGACTTCCATACTAGAAGAAACATCTATTTCCAAGAGGAATCTTCTTTTTGTTATGGAAAGTATGTTGTCTGAATAAATAGTGTTTCTTCCTCTGATGTTACAAGTGAACAAACTCGAGGTTTATTGCCACAGACTAATAGAGTTAAAGTTGCTGTAGGTTTGCTGAAACTTGATCATGATGAATGTGAGAAGATCTGTTCACTTATTCATCCTTGTGTTGAGGATATGAAACAGATGAAAGACAGTCATTCATCCGAAGTATCAGAGATAGCGGAAAATGCAGGAAAAGTATTGACAGATGAGTATAAGGTTAAAGCTCAGAAAACTATGCAAGTATTTTTGAATTAAAACTAAAAAGCATAATACTCAAATTCACACAATGCTATTACAATCTGTATTTCTGAACGGTTTAAATTTTCTCTCTTCATCATTCAGAAAAACCT</genome_strand>
        <mrna_strand>AATGACCTTAGAGAGTGCTCTAATATCAAAACCAGAAATCTAAATGCTGAGTTCTCAAACATACAAGATTGTGCTAATTCTGCCTATGAAGAGTGGACAAACTACATTGGAAGCACAGAAGCCCATCATATCGAGGATTCAACTAGATTGGAATTTTGGAAAAGTAGCCTAGCAGGAAACATCTATTGCTG....................................................................................................CTTAACAAAATCAAAGGGGATCGAAGATGGATGGAGAAATGCCCAAGAATCCCTTCATTCCCAAGAAACAAGAACCATCAACTCAGTCGATTCTATTGTTAA.........................................................................GAGTGCTATGGAATCTAATGGAAAGATCGGCTCTCAATTTTCCTCCACCGTGACTTCCATACTAGAAGAAACATCTATTTCCAAGAGGAATCTTCTTTTTGTTATGGAAA..................................................................................................GTTTGCTGAAACTTGATCATGATGAATGTGAGAAGATCTGTTCACTTATTCATCCTTGTGTTGAGGATATGAAACAGATGAAAGACAGTCATTCATCCGAAGTATCAGAGATAGCGGAAAATGCAGGAAAAGTATTGACAGATGAGTATAAGGTTAAAGCTCAGAAAACTATGCAAGTATTTTTTGATTAAAACTAAAAAGCATAATACTCAAATTCACACAATGCTATTACAATCTGTATTTCTGAACGG-NTAAAATTTCTCTCTTCATCATTCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U339656" ref_strand="+" ref_description="SGN-U339656        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | kinesin motor protein-related, kinesin-related protein TKRP125, Nicotiana tabacum, PIR:T02017 | chr3:16866597-16871935 REVERSE | Aliases: F16L2.60(evalue: 4e-25, score=86.3) genbank/nr: gi|15231259|ref|NP_190171.1| kinesin-related protein [Arabidopsis thaliana] gi|11276945|pir||T47525 kinesin-related protein-like - Arabidopsis thaliana gi|7339486|emb|CAB82809.1| kinesin-related protein-like [Arabidopsis thaliana](evalue: 3e-23, score=86.3)">
      <seq>aatgaccttagagagtgctctaatatcaaaaccagaaatctaaatgctgagttctcaaacatacaagattgtgctaattctgcctatgaagagtggacaaactacattgaaagcacagaagcccatcatatcgaggattcaactagattggaattttggaaaagtagcctagcaggaaacatctattgctggttgagttggtttcgatgatataaaatttataaatattgcactgtattttgcattgtatacctttagtcaagctattatatttctcatcttgaatttcagcttaacaaaatcaaaggggatcgaagatggatggagaaatgcccaagaatcccttcattcccaagaaacaagaaccatcaactcagtcgattctattgttaagagtgctatggaatctaatggaaagatcggctctcaattttcctccaccgtgacttccatactagaagaaacatctatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0157E03.1" temp_strand="-" temp_description="C09HBa0157E03.1  AC234414.1 htgs_phase:1 submitted_to_sgn_as:gnl|gbrgsp|C09HBa0157E03 upload_account_name:spain (1 - 93835)">
        <position start="25251" stop="24107"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24951" g_stop="24559" g_length="393"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="393" r_length="393" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24558" i_stop="24486" i_length="73">
            <donor d_prob="0.782" d_score="1.00"/>
            <acceptor a_prob="0.923" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24485" g_stop="24407" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="394" r_stop="472" r_length="79" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0157E03.1" gen_strand="-" ref_id="SGN-U339656" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>472</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0157E03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U339656" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24951" e_stop="24559"/>
          <exon e_start="24485" e_stop="24407"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGACCTTAGAGAGTGCTCTAATATCAAAACCAGAAATCTAAATGCTGAGTTCTCAAACATACAAGATTGTGCTAATTCTGCCTATGAAGAGTGGACAAACTACATTGAAAGCACAGAAGCCCATCATATCGAGGATTCAACTAGATTGGAATTTTGGAAAAGTAGCCTAGCAGGAAACATCTATTGCTGGTTGAGTTGGTTTCGATGATATAAAATTTATAAATATTGCACTGTATTTTGCATTGTATACCTTTAGTCAAGCTATTATATTTCTCATCTTGAATTTCAGCTTAACAAAATCAAAGGGGATCGAAGATGGATGGAGAAATGCCCAAGAATCCCTTCATTCCCAAGAAACAAGAACCATCAACTCAGTCGATTCTATTGTTAAGTGAGTTATCATTTTCAGATGAATCAACTACCATCTGAGGACTTTTTTTACATTTTTACCTCGATATGTTCAGGAGTGCTATGGAATCTAATGGAAAGATCGGCTCTCAATTTTCCTCCACCGTGACTTCCATACTAGAAGAAACATCTATT</genome_strand>
        <mrna_strand>AATGACCTTAGAGAGTGCTCTAATATCAAAACCAGAAATCTAAATGCTGAGTTCTCAAACATACAAGATTGTGCTAATTCTGCCTATGAAGAGTGGACAAACTACATTGAAAGCACAGAAGCCCATCATATCGAGGATTCAACTAGATTGGAATTTTGGAAAAGTAGCCTAGCAGGAAACATCTATTGCTGGTTGAGTTGGTTTCGATGATATAAAATTTATAAATATTGCACTGTATTTTGCATTGTATACCTTTAGTCAAGCTATTATATTTCTCATCTTGAATTTCAGCTTAACAAAATCAAAGGGGATCGAAGATGGATGGAGAAATGCCCAAGAATCCCTTCATTCCCAAGAAACAAGAACCATCAACTCAGTCGATTCTATTGTTAA.........................................................................GAGTGCTATGGAATCTAATGGAAAGATCGGCTCTCAATTTTCCTCCACCGTGACTTCCATACTAGAAGAAACATCTATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U331615" ref_strand="+" ref_description="SGN-U331615        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | kinesin motor protein-related, kinesin-related protein TKRP125, Nicotiana tabacum, PIR:T02017 | chr3:16866597-16871935 REVERSE | Aliases: F16L2.60(evalue: 3e-63, score=238) genbank/nr: Kinesin,(evalue: 2e-65, score=251)">
      <seq>aagaattacatgcaacgagggagaagaatggaatctacatacctcaagatcgttacctgagtgaagaagcagctcataaggcgatagttgagaaactgaagttcacagaacttgatttagagtccaaaaataagaaactgatagagcttcaggatctttatgataatcagcaacaactgacagcagatttaactgaacaacttcagagaactcggagagaactaaagaaagcagaacaagctttctatgatctagaagctcaaaataggcgagcgaaagaagtgattcaagagaaggattctctagtatccgacctcattaaatctgaaaaggaaatgactaataaagcacttgagtttcgagctgaagtagagaatgcagaatcagagatatccagcttgttcgccaaaattgaaaaaggcaacagtagagaggaaagaaacagaatccttgtgcaaagctaccgcagcaaattaactcagcagcttgaaattttaaagagaaaaacagcaaattctgtaagcaaacaagagcagcaattgaatgtaatattagaagatatgcaatccttcttagctactaaaagaagggctacagatgaattgaaggttcagctccagaagctgaaagacaattataactccgatatccagaatttagctgttccagcccgagatcttcatgaaaattctcagctagctttaagcaaagtgaattcagcaatatcaaagcattcttctgctttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0157E03.1" temp_strand="-" temp_description="C09HBa0157E03.1  AC234414.1 htgs_phase:1 submitted_to_sgn_as:gnl|gbrgsp|C09HBa0157E03 upload_account_name:spain (1 - 93835)">
        <position start="27585" stop="25619"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27286" g_stop="27207" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="80" r_length="80" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27206" i_stop="27108" i_length="99">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27107" g_stop="27054" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="81" r_stop="134" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27053" i_stop="26967" i_length="87">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26966" g_stop="26886" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="135" r_stop="215" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26885" i_stop="26785" i_length="101">
            <donor d_prob="0.865" d_score="1.00"/>
            <acceptor a_prob="0.708" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26784" g_stop="26673" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="327" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="26672" i_stop="26509" i_length="164">
            <donor d_prob="0.903" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="26508" g_stop="26422" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="328" r_stop="414" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="26421" i_stop="26337" i_length="85">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="26336" g_stop="26161" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="415" r_stop="590" r_length="176" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="26160" i_stop="26076" i_length="85">
            <donor d_prob="0.416" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="26075" g_stop="25919" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="591" r_stop="747" r_length="157" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0157E03.1" gen_strand="-" ref_id="SGN-U331615" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>747</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0157E03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U331615" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27286" e_stop="27207"/>
          <exon e_start="27107" e_stop="27054"/>
          <exon e_start="26966" e_stop="26886"/>
          <exon e_start="26784" e_stop="26673"/>
          <exon e_start="26508" e_stop="26422"/>
          <exon e_start="26336" e_stop="26161"/>
          <exon e_start="26075" e_stop="25919"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAATTACATGCAACGAGGGAGAAGAATGGAATCTACATACCTCAAGATCGTTACCTGAGTGAAGAAGCAGCTCATAAGGTGCTATTACCATCAATATATCTGGAGAGCTACTCTTGATCTATAAAATAGTAACAAACTTTATAACTCGAATGCTTCTTCCTTTTTCCCCCTTTTTAGGCGATAGTTGAGAAACTGAAGTTCACAGAACTTGATTTAGAGTCCAAAAATAAGGTAAGTATTACCTGGTCTATCTTGTAGGCAGCTTATGCAAGTTCTAATTTATTCCAAGATAATAGAGAAGTTAAACATTCTGAACAGAAACTGATAGAGCTTCAGGATCTTTATGATAATCAGCAACAACTGACAGCAGATTTAACTGAACAACTTCAGAGAACTCGGGTAGGATGTTACTTGAACAAGTTACTATACGTCTCTCTCTTTTACCATGATATCAAGAACCTACAAGATAATTAAACTTTCCAGCATCTATTTTATGACAGAGAGAACTAAAGAAAGCAGAACAAGCTTTCTATGATCTAGAAGCTCAAAATAGGCGAGCGAAAGAAGTGATTCAAGAGAAGGATTCTCTAGTATCCGACCTCATTAAATCTGGTAAGAAGTGTGTTCCAAACATATAATTGAAATACAAAGATGATCCAAAGCTTTCCTGAATCCTTACACCATGTACGAATAAATATGTATCTATTAACGGCTCATAGGAGAGAAGTTTATTCTTGAAATTATTGAATCTGCATATTTTACCTCTGGTTATTCAGAAAAGGAAATGACTAATAAAGCACTTGAGTTTCGAGCTGAAGTAGAGAATGCAGAATCAGAGATATCCAGCTTGTTCGCCAAAATTGGTCCGCACTACTACCTCTTCTGGTCTTTAGTCTTTATCTGGTTAAGATCAGTTTCTTCTTCTAACATATGTTTATTATAATACAGAAAAAGGCAACAGTAGAGAGGAAAGAAACAGAATCCTTGTGCAAAGCTACCGCAGCAAATTAACTCAGCAGCTTGAAATTTTAAAGAGAAAAACAGCAAATTCTGTAAGCAAACAAGAGCAGCAATTGAATGTAATATTAGAAGATATGCAATCCTTCTTAGCTACTAAAAGAAGGGTACAGTGAAATTCTTTCGACATACGGTACTCTGATAATCTGTGACCTGAAAATGGAACTTATCTAATCTTGAATTTACGGACAGGCTACAGATGAATTGAAGGTTCAGCTCCAGAAGCTGAAAGACAATTATAACTCCGATATCCAGAATTTAGCTGTTCCAGCCCGAGATCTTCATGAAAATTCTCAGCTAGCTTTAAGCAAAGTGAATTCAGCAATATCAAAGCATTCTTCTGCTTTTA</genome_strand>
        <mrna_strand>AAGAATTACATGCAACGAGGGAGAAGAATGGAATCTACATACCTCAAGATCGTTACCTGAGTGAAGAAGCAGCTCATAAG...................................................................................................GCGATAGTTGAGAAACTGAAGTTCACAGAACTTGATTTAGAGTCCAAAAATAAG.......................................................................................AAACTGATAGAGCTTCAGGATCTTTATGATAATCAGCAACAACTGACAGCAGATTTAACTGAACAACTTCAGAGAACTCGG.....................................................................................................AGAGAACTAAAGAAAGCAGAACAAGCTTTCTATGATCTAGAAGCTCAAAATAGGCGAGCGAAAGAAGTGATTCAAGAGAAGGATTCTCTAGTATCCGACCTCATTAAATCTG....................................................................................................................................................................AAAAGGAAATGACTAATAAAGCACTTGAGTTTCGAGCTGAAGTAGAGAATGCAGAATCAGAGATATCCAGCTTGTTCGCCAAAATTG.....................................................................................AAAAAGGCAACAGTAGAGAGGAAAGAAACAGAATCCTTGTGCAAAGCTACCGCAGCAAATTAACTCAGCAGCTTGAAATTTTAAAGAGAAAAACAGCAAATTCTGTAAGCAAACAAGAGCAGCAATTGAATGTAATATTAGAAGATATGCAATCCTTCTTAGCTACTAAAAGAAGG.....................................................................................GCTACAGATGAATTGAAGGTTCAGCTCCAGAAGCTGAAAGACAATTATAACTCCGATATCCAGAATTTAGCTGTTCCAGCCCGAGATCTTCATGAAAATTCTCAGCTAGCTTTAAGCAAAGTGAATTCAGCAATATCAAAGCATTCTTCTGCTTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U340434" ref_strand="+" ref_description="SGN-U340434        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | kinesin motor protein-related, kinesin-related protein TKRP125, Nicotiana tabacum, PIR:T02017 | chr3:16866597-16871935 REVERSE | Aliases: F16L2.60(evalue: 1e-65, score=246) genbank/nr: Kinesin,(evalue: 2e-67, score=258)">
      <seq>aaagaagagggagttcttctcctttcttgatgtctcaaacactatggtcatcaacagaaaaaacatgcagatcaggattgatcagatcaaatgatgaaaaaggggtaaatgtgaaagttgtattgcgttgcaggccaccaaatgaggatgaaatgaagatgaaaggccctttggtgatctcatgcgacgagctgaaacaagaagtcactgcaacattgaacacaactactaagcaaataaacaaatcatttctatttgataaggtttgtggtccatcaactcagcaaaaggacttctatgatcagtctgtggctcctcttgttaatgaggcgctcgaaggatatacttgtactatttttgcttatggccaaactggaacaggaaaaacttacacaatggaaggggaagcaattaaagagaagaatggggagtttcacaagaatgctggagtaatacctagagcagtccaagagatttttgacattttggagtctcaaaaggctgagtacactatgaaagttgcatatatagaaatttataatgaggagataacagatcttctttccctggacgaggaatcaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0157E03.1" temp_strand="-" temp_description="C09HBa0157E03.1  AC234414.1 htgs_phase:1 submitted_to_sgn_as:gnl|gbrgsp|C09HBa0157E03 upload_account_name:spain (1 - 93835)">
        <position start="30729" stop="28719"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30429" g_stop="30297" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="133" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30296" i_stop="29919" i_length="378">
            <donor d_prob="0.842" d_score="1.00"/>
            <acceptor a_prob="0.634" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29918" g_stop="29789" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="134" r_stop="263" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29788" i_stop="29703" i_length="86">
            <donor d_prob="0.601" d_score="1.00"/>
            <acceptor a_prob="0.515" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29702" g_stop="29544" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="264" r_stop="422" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29543" i_stop="29182" i_length="362">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29181" g_stop="29019" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="423" r_stop="585" r_length="163" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0157E03.1" gen_strand="-" ref_id="SGN-U340434" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>585</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0157E03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U340434" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30429" e_stop="30297"/>
          <exon e_start="29918" e_stop="29789"/>
          <exon e_start="29702" e_stop="29544"/>
          <exon e_start="29181" e_stop="29019"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGAAGAGGGAGTTCTTCTCCTTTCTTGATGTCTCAAACACTATGGTCATCAACAGAAAAAACATGCAGATCAGGATTGATCAGATCAAATGATGAAAAAGGGGTAAATGTGAAAGTTGTATTGCGTTGCAGGTATGAACAAGTTGAAATTTTTTCCATCGCTAATTCTACGCGTTCATACGATAACTATACCTTAATTTCAAGAAAATTGGGAATCCTTACTGTCCTAAGTGTATTGGCAATAAGGTCACATGTTTGGAGCTCTACATGTTCTTAATATTTGCTTTACTTGACTCGAGGTGTCTATCAGAAACAGTTTTTCTACCTTCACAAGGTAGGGGTAAGGTCACCTATACACCACTCAACCCAGACTCCACTTGTGGGATTACGCTAGGTTTATTGTTGTTGTTATGTTCTAATATTAAAGATAATGTAGTATATAACACTACAAGCAAGACGTGTAGGTGGATAGACTCATAAACTTACCATAGAGACTTACTCGTCTTTCAGGCCACCAAATGAGGATGAAATGAAGATGAAAGGCCCTTTGGTGATCTCATGCGACGAGCTGAAACAAGAAGTCACTGCAACATTGAACACAACTACTAAGCAAATAAACAAATCATTTCTATTTGATAAGGTTATATATATATATATATTTCATTATTACGAAAAATTGTGTAGTAACGTTGATAAGGACCCCTTTAATGCCACAATATTTGTTAGGTTTGTGGTCCATCAACTCAGCAAAAGGACTTCTATGATCAGTCTGTGGCTCCTCTTGTTAATGAGGCGCTCGAAGGATATACTTGTACTATTTTTGCTTATGGCCAAACTGGAACAGGAAAAACTTACACAATGGAAGGGGAAGCAATTAAAGAGAAGGTTCTTTCTGATTCTTTCTTCGTCTTCCCCTCCCCCCCCCCCCCCCCCTCCAAAAGGTAACAGAGGCGGAGAATAGCTCAATTGGTTGGCTACCTGAACTTTCACCTTGTTGATGAGAGTTCGATTCCCCAATGACAGGGGCGGATTCAGGATTTGAAGTTTGTGGGTTTTGAACTTGCCACCGAACTTGTAGCTCAATTGAGTTACTAAGTTCGTTATTAAATATTTATACATATTTAATGAAGCTCCCTAATACAAAAGCTATTTGGTTCGTCAAAACTCTTAACTTATATTGTAGCTCCGCCCCTGATTTTGTTGGCTTTTATCGTTTTTACATCCTATTTTAATGTTGATGGTTGTAGAATGGGGAGTTTCACAAGAATGCTGGAGTAATACCTAGAGCAGTCCAAGAGATTTTTGACATTTTGGAGTCTCAAAAGGCTGAGTACACTATGAAAGTTGCATATATAGAAATTTATAATGAGGAGATAACAGATCTTCTTTCCCTGGACGAGGAATCAAAAC</genome_strand>
        <mrna_strand>AAAGAAGAGGGAGTTCTTCTCCTTTCTTGATGTCTCAAACACTATGGTCATCAACAGAAAAAACATGCAGATCAGGATTGATCAGATCAAATGATGAAAAAGGGGTAAATGTGAAAGTTGTATTGCGTTGCAG..........................................................................................................................................................................................................................................................................................................................................................................................GCCACCAAATGAGGATGAAATGAAGATGAAAGGCCCTTTGGTGATCTCATGCGACGAGCTGAAACAAGAAGTCACTGCAACATTGAACACAACTACTAAGCAAATAAACAAATCATTTCTATTTGATAAG......................................................................................GTTTGTGGTCCATCAACTCAGCAAAAGGACTTCTATGATCAGTCTGTGGCTCCTCTTGTTAATGAGGCGCTCGAAGGATATACTTGTACTATTTTTGCTTATGGCCAAACTGGAACAGGAAAAACTTACACAATGGAAGGGGAAGCAATTAAAGAGAAG..........................................................................................................................................................................................................................................................................................................................................................................AATGGGGAGTTTCACAAGAATGCTGGAGTAATACCTAGAGCAGTCCAAGAGATTTTTGACATTTTGGAGTCTCAAAAGGCTGAGTACACTATGAAAGTTGCATATATAGAAATTTATAATGAGGAGATAACAGATCTTCTTTCCCTGGACGAGGAATCAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U339116" ref_strand="+" ref_description="SGN-U339116        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | pathogenesis-related protein, putative, similar to SP:P33154 Pathogenesis-related protein 1 precursor (PR-1) {Arabidopsis thaliana}; contains Pfam profile PF00188: SCP-like extracellular protein | chr2:6232617-6233306 REVERSE | Aliases: T13P21.4, T13P21_4(evalue: 1e-48, score=190) genbank/nr: gi|2414525|emb|CAA04881.1| pathogenesis-related protein [Lycopersicon esculentum](evalue: 2e-94, score=349)">
      <seq>tttctctcaaagcaaaaatggggttgtttaacatgtcattgttacttatgacttgtctcatggtattagccatatttcactcttgtgatgctcaaaattcaccccaagactatcttgaggttcacaacgacgcccgtgcccaagtcggagtcgggccaatgtcttgggatgccgacttggaatcccgagcacaaagctatgccaactcaagagcgggtgattgtaacttgattcattctggttcaggggagaatcttgccaagggtggtggtgacttcacggggagggccgctgtggaattgtgggtgtcggaaaagccaaactacaactacgatacgaatgaatgtgttagcggaaaaatgtgcggacattatactcaagtagtctggcgtgactcagttcgactaggttgtggtcgggctctttgcaacgacgggtggtggtttatttcttgcaactatgatcctgtaggcaattgggtcggacaacgtccttactaaaatgtttttttttttttgtatgatgtgtaagggatcaaataattattattatttccctttgatgtttgctagtatgaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0157E03.1" temp_strand="-" temp_description="C09HBa0157E03.1  AC234414.1 htgs_phase:1 submitted_to_sgn_as:gnl|gbrgsp|C09HBa0157E03 upload_account_name:spain (1 - 93835)">
        <position start="34197" stop="33019"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33897" g_stop="33319" g_length="579"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="579" r_length="579" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0157E03.1" gen_strand="-" ref_id="SGN-U339116" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>579</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0157E03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U339116" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33897" e_stop="33319"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTCTCAAAGCAAAAATGGGGTTGTTTAACATGTCATTGTTACTTATGACTTGTCTCATGGTATTAGCCATATTTCACTCTTGTGATGCTCAAAATTCACCCCAAGACTATCTTGAGGTTCACAACGACGCCCGTGCCCAAGTCGGAGTCGGGCCAATGTCTTGGGATGCCGACTTGGAATCCCGAGCACAAAGCTATGCCAACTCAAGAGCGGGTGATTGTAACTTGATTCATTCTGGTTCAGGGGAGAATCTTGCCAAGGGTGGTGGTGACTTCACGGGGAGGGCCGCTGTGGAATTGTGGGTGTCGGAAAAGCCAAACTACAACTACGATACGAATGAATGTGTTAGCGGAAAAATGTGCGGACATTATACTCAAGTAGTCTGGCGTGACTCAGTTCGACTAGGTTGTGGTCGGGCTCTTTGCAACGACGGGTGGTGGTTTATTTCTTGCAACTATGATCCTGTAGGCAATTGGGTCGGACAACGTCCTTACTAAAATGTTTTTTTTTTTTTGTATGATGTGTAAGGGATCAAATAATTATTATTATTTCCCTTTGATGTTTGCTAGTATGAAT</genome_strand>
        <mrna_strand>TTTCTCTCAAAGCAAAAATGGGGTTGTTTAACATGTCATTGTTACTTATGACTTGTCTCATGGTATTAGCCATATTTCACTCTTGTGATGCTCAAAATTCACCCCAAGACTATCTTGAGGTTCACAACGACGCCCGTGCCCAAGTCGGAGTCGGGCCAATGTCTTGGGATGCCGACTTGGAATCCCGAGCACAAAGCTATGCCAACTCAAGAGCGGGTGATTGTAACTTGATTCATTCTGGTTCAGGGGAGAATCTTGCCAAGGGTGGTGGTGACTTCACGGGGAGGGCCGCTGTGGAATTGTGGGTGTCGGAAAAGCCAAACTACAACTACGATACGAATGAATGTGTTAGCGGAAAAATGTGCGGACATTATACTCAAGTAGTCTGGCGTGACTCAGTTCGACTAGGTTGTGGTCGGGCTCTTTGCAACGACGGGTGGTGGTTTATTTCTTGCAACTATGATCCTGTAGGCAATTGGGTCGGACAACGTCCTTACTAAAATGTTTTTTTTTTTTTGTATGATGTGTAAGGGATCAAATAATTATTATTATTTCCCTTTGATGTTTGCTAGTATGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U339055" ref_strand="+" ref_description="SGN-U339055        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | pathogenesis-related protein, putative, similar to prb-1b (Nicotiana tabacum) GI:19970; contains Pfam profile PF00188: SCP-like extracellular protein | chr1:18554854-18556246 FORWARD | Aliases: F2J10.6, F2J10_6(evalue: 6e-13, score=71.6) genbank/nr: gi|3660529|emb|CAA09671.1| pathogenesis-related protein PR1a (P4) [Lycopersicon esculentum] >gi|2119761|pir||S26238 pathogenesis-related protein isoform P4 precursor - tomato >gi|548586|sp|Q04108|PR04_LYCES Pathogenesis-related leaf protein 4 precursor (P4) >gi|170488|gb|AAA03615.1| pathogenesis-related protein P4 (evalue: 2e-21, score=106)">
      <seq>ttttttttttttgtggataggtcctatatattattaacactacttgatttttaaatatcttaatttcataattttgaaaaagtaaagaacctaagccacgataccatgaacatatggtacgtggaattattcctactagcaacatcaaagggaaacaacaacaacaacaataataataggatatcaatccgatccacttatcattttaattcctagacatgtaatatggaaattttatttagtactagcaacatgtcagaaatagacgatactttaataaggacgttctccaacccagttgcctacaggatcgtagttgcaagaaatgaaccaccacccattgttgcaacgatttttttttacaacctagtcggactgagttgcgccgggagggaggtgagtaaaatgtccactcatttttccaccaacacattggttggtagcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0157E03.1" temp_strand="+" temp_description="C09HBa0157E03.1  AC234414.1 htgs_phase:1 submitted_to_sgn_as:gnl|gbrgsp|C09HBa0157E03 upload_account_name:spain (1 - 93835)">
        <position start="36296" stop="37328"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36596" g_stop="37028" g_length="433"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="445" r_length="436" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0157E03.1" gen_strand="+" ref_id="SGN-U339055" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>433</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0157E03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U339055" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36596" e_stop="37028"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTGGATAGGTCCTATATATTATTAACACTACTTGATTTTTAAATATATAAATTTCATAATTTTGAAAAAGTAAAGAACCTAAGCCACGATACCATGAACATATGGTACGTGGAATTATTCATACTAGCAACATCAAAGGGAAACAACAACAACAACAATAATAATAGGATATCAATCCGATCCACTTATCATTTTAATTCCTAGACATGTAATATGGAAATTTTATTTAGTACTAGCAACATGTCAGAAATAGACGATACTTTAATAAGGACGTTCTCCAACCCAGTTGCCTACAGGATCGTAGTTGCAAGAAATGAACCACCACCCATTGTTGCAACGA-GCCCGACCACAACCTAGTCGGACTGAGTTGCGCC-AGA-CTACTTGAGTATAATGTCCACACATTTTTCCACCAACACATTGGTTGGTAGCG</genome_strand>
        <mrna_strand>TTTGTGGATAGGTCCTATATATTATTAACACTACTTGATTTTTAAATATCTTAATTTCATAATTTTGAAAAAGTAAAGAACCTAAGCCACGATACCATGAACATATGGTACGTGGAATTATTCCTACTAGCAACATCAAAGGGAAACAACAACAACAACAATAATAATAGGATATCAATCCGATCCACTTATCATTTTAATTCCTAGACATGTAATATGGAAATTTTATTTAGTACTAGCAACATGTCAGAAATAGACGATACTTTAATAAGGACGTTCTCCAACCCAGTTGCCTACAGGATCGTAGTTGCAAGAAATGAACCACCACCCATTGTTGCAACGATTTTTTTTTACAACCTAGTCGGACTGAGTTGCGCCGGGAGGGAGGTGAGTAAAATGTCCACTCATTTTTCCACCAACACATTGGTTGGTAGCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U314863" ref_strand="+" ref_description="SGN-U314863        Tomato 200607 #1 [7 ESTs aligned] arabidopsis/peptide: | Symbol: None | pathogenesis-related protein 1 (PR-1), identical to GB:M90508 SP:P33154 | chr2:6248786-6249545 REVERSE | Aliases: T6B13.15, T6B13_15(evalue: 8e-48, score=186) genbank/nr: gi|21726980|emb|CAD38276.1| pathogenesis related protein isoform b1 [Solanum phureja](evalue: 2e-75, score=285)">
      <seq>ctctctcaactacacctaaaattcaatggggttattcgaaaaccacattgtttctcttttgtttcatgatattagccatatttcactcttgtgacgctcaaaattcaccacaagactatcttgtggttcacaacaatgctcgtggtcaagtcggggttgggcctatgtcttgggatgatgccttggcaaccaaagcacaaaggtatgctgactcaagaagaggtgattgcaacttgattcattctggtccaggggagaatcttgccaagggtagtggagatttcacagggaggcgtgcctctgaattgtgggtggcggagaagccaaactacaactatggtaccaaccaatgtgctagtgggaaagtgtgcggacactatactcaagtagtttggcgtacctcgatcaggctaggttgtggtcgggctcgttgtaacaacgggtggtggttcatttgttgcaactatgctccttttggtaacatcatcggacaacgtccttactaaaactatgttaacttatgacatattatattatatgtattagtattaaataaaattccccaccctatatgtcaaagggattaaatggagttgcataattattattttcccttgatattgctagtatgaatgatttcatgtaccatattttcatggtatagggaagggtgggcatgttataatatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0157E03.1" temp_strand="+" temp_description="C09HBa0157E03.1  AC234414.1 htgs_phase:1 submitted_to_sgn_as:gnl|gbrgsp|C09HBa0157E03 upload_account_name:spain (1 - 93835)">
        <position start="44946" stop="46234"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45246" g_stop="45934" g_length="689"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="690" r_length="690" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0157E03.1" gen_strand="+" ref_id="SGN-U314863" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>689</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0157E03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U314863" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45246" e_stop="45934"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTCTCAACTACACCTAAAATTCAATGGGGTTATTCGAAAA-CACATTGTTTCTCTTTTGTTTCATGATATTAGCCATATTTCACTCTTGTGACGCTCAAAATTCACCACAAGACTATCTTGTGGTTCACAACAATGCTCGTGGTCAAGTCGGGGTTGGGCCTATGTCTTGGGATGATGCCTTGGCAACCAAAGCACAAAGGTATGCTGACTCAAGAAGAGGTGATTGCAACTTGATTCATTCTGGTCCAGGGGAGAATCTTGCCAAGGGTAGTGGAGATTTCACAGGGAGGCGTGCCTCTGAATTGTGGGTGGCGGAGAAGCCAAACTACAACTATGGTACCAACCAATGTGCTAGTGGGAAAGTGTGCGGACACTATACTCAAGTAGTTTGGCGTACCTCGATCAGGCTAGGTTGTGGTCGGGCTCGTTGTAACAACGGGTGGTGGTTCATTTGTTGCAACTATGCTCCTTTTGGTAACATCATCGGACAACGTCCTTACTAAAACTATGTTAACTTATGACATATTATATTATATGTATTAGTATTAAATAAAATTCCCCACCCTATATGTCAAAGGGATTAAATGGAGTTGCATAATTATTATTTTCCCTTGATATTGCTAGTATGAATAATTTCATGTACCATATTTTCATGGTATAGGGAAGGGTGGGCATGTTATAATATTA</genome_strand>
        <mrna_strand>CTCTCTCAACTACACCTAAAATTCAATGGGGTTATTCGAAAACCACATTGTTTCTCTTTTGTTTCATGATATTAGCCATATTTCACTCTTGTGACGCTCAAAATTCACCACAAGACTATCTTGTGGTTCACAACAATGCTCGTGGTCAAGTCGGGGTTGGGCCTATGTCTTGGGATGATGCCTTGGCAACCAAAGCACAAAGGTATGCTGACTCAAGAAGAGGTGATTGCAACTTGATTCATTCTGGTCCAGGGGAGAATCTTGCCAAGGGTAGTGGAGATTTCACAGGGAGGCGTGCCTCTGAATTGTGGGTGGCGGAGAAGCCAAACTACAACTATGGTACCAACCAATGTGCTAGTGGGAAAGTGTGCGGACACTATACTCAAGTAGTTTGGCGTACCTCGATCAGGCTAGGTTGTGGTCGGGCTCGTTGTAACAACGGGTGGTGGTTCATTTGTTGCAACTATGCTCCTTTTGGTAACATCATCGGACAACGTCCTTACTAAAACTATGTTAACTTATGACATATTATATTATATGTATTAGTATTAAATAAAATTCCCCACCCTATATGTCAAAGGGATTAAATGGAGTTGCATAATTATTATTTTCCCTTGATATTGCTAGTATGAATGATTTCATGTACCATATTTTCATGGTATAGGGAAGGGTGGGCATGTTATAATATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U339053" ref_strand="-" ref_description="SGN-U339053        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | pathogenesis-related protein, putative, similar to prb-1b (Nicotiana tabacum) GI:19970; contains Pfam profile PF00188: SCP-like extracellular protein | chr1:18554854-18556246 FORWARD | Aliases: F2J10.6, F2J10_6(evalue: 2e-34, score=143) genbank/nr: gi|6066750|emb|CAB58263.1| pathogenesis related protein PR-1 [Solanum tuberosum](evalue: 3e-54, score=215)">
      <seq>cctcgtcccgaatcggcacgaggataacgccttggcaaccaaagcacaaaggtatgctgactcaagaagaggtgattgcaacttgattcattttggtccaggagagaatcttgccaagggtagtggagacttcacggggaggcgtgcctctgaattgtgggtggcggagaagccaaactacaactatggtaccaaccaatgtgctagtgggaaagtgtgcggacactatactcaagtagtttggcgtaattctgtcaggcttggttgtggtcgggctcgttgcaacaacggatggtggttcatttgttgcaactatcatcccgtaggcaattgggtcggacaacgtccttactaaagggatgtttacttatgacatgttgctagtattaaataaaattctcaaatgagacgtcgagaagttaacctttaagggggccatatggatcaantcaatctcctatctaaccttataggggattaaatattaccttctaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0157E03.1" temp_strand="+" temp_description="C09HBa0157E03.1  AC234414.1 htgs_phase:1 submitted_to_sgn_as:gnl|gbrgsp|C09HBa0157E03 upload_account_name:spain (1 - 93835)">
        <position start="45109" stop="56746"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45417" g_stop="45721" g_length="305"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="326" r_length="305" r_score="0.941"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45722" i_stop="50923" i_length="5202">
            <donor d_prob="0.729" d_score="0.86"/>
            <acceptor a_prob="0.639" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50924" g_stop="51095" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="327" r_stop="497" r_length="171" r_score="0.860"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="51096" i_stop="51513" i_length="418">
            <donor d_prob="0.000" d_score="0.78"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="51514" g_stop="51526" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="498" r_stop="510" r_length="13" r_score="0.846"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0157E03.1" gen_strand="+" ref_id="SGN-U339053" ref_strand="-">
        <total_alignment_score>0.912</total_alignment_score>
        <cumulative_length_of_scored_exons>490</cumulative_length_of_scored_exons>
        <coverage percentage="0.961" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0157E03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U339053" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="45417" e_stop="45721"/>
          <exon e_start="50924" e_stop="51095"/>
          <exon e_start="51514" e_stop="51526"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATGATGCCTTGGCAACCAAAGCACAAAGGTATGCTGACTCAAGAAGAGGTGATTGCAACTTGATTCATTCTGGTCCAGGGGAGAATCTTGCCAAGGGTAGTGGAGATTTCACAGGGAGGCGTGCCTCTGAATTGTGGGTGGCGGAGAAGCCAAACTACAACTATGGTACCAACCAATGTGCTAGTGGGAAAGTGTGCGGACACTATACTCAAGTAGTTTGGCGTACCTCGATCAGGCTAGGTTGTGGTCGGGCTCGTTGTAACAACGGGTGGTGGTTCATTTGTTGCAACTATGCTCCTTTTGGTAACATCATCGGACAACGTCCTTACTAAAACTATGTTAACTTATGACATATTATATTATATGTATTAGTATTAAATAAAATTCCCCACCCTATATGTCAAAGGGATTAAATGGAGTTGCATAATTATTATTTTCCCTTGATATTGCTAGTATGAATAATTTCATGTACCATATTTTCATGGTATAGGGAAGGGTGGGCATGTTATAATATTATGGTATAACATTGAAAATTTCGATTCGATAATTTTTATTTTAAAACTAATTAATATTTTCTATGTCTCATCTTATGTGATATCATTTGATTTAACATGGTGTTTAAGAAGAAAAAAACTTTTGAAACTTGTGGTTCAAAACAATCTTTAAATATTTGTGTGGTTAAAAATCGTCTCCTTAAGGGTAAAATAGGTATTTTAAGGTTAAATTTTTTTTCTAATTATTAGAAGGTGTCATTCTTTTTGGAACAGACCACATCAAATCGAACGGAGGTAGTATATCATTATCATACAAAATTGATTTGGTATTTTATGGTACGATAAATCGATAATCATATATAGTTAATTTGTTCAACTTTCTCTTACATATACTCATATGGAATGGAATTACAGAATTATAACTTCGACTTTTTAATATACATCCCGATTATATCATACTTACCGATGTACACATATACTCCAAATTAATATTTTCACATATTTTTTAATGGTAATAATATAATCGTTATTGTATTATTTTTAACAATAATAATAAACATATATATTTTATAGTTATTACTTTATTTGAATATCGTTAAAAAATTTAACGATTTTAGATAAAATAACATTAATTCAATTACCATTAAATGTCTATATAAAAAAAGTGTCTATCATGATCATTTTTTTCTTTTTTTGTTTGAATTCTATCCAAATTGCTTTTAATGATTAACAAATTTTAGTCTTCCCTTTTTCATAGAATAATTTTATCCCCATACAAGAGGAATATTCACGGCATGTGCAGCTCAATATTTTATTTTAAAAAAATTTAAAAATCGACAATGGGGTGGGGGGGTGGGGGTGGGGGTGGGGTAAATGTTGCTAAAAAGAGTTTTTCACCTCAATGGAACTTACATGACATGAAGTCGAATTAATTAGAATTTCTAATAAAGATATCAACTTTGTAAAAATTAGAAAATAAATTTGGAGCCCTACAATTTTGACTACAACTATGGTACCAACCAATGTGCTAGCAGGCAAATTGCGCCGACATTATACTTAAGGAGTCTGGCGCAACTCAGTCCGACTAGGTTGTAGTCGGGCTCGTTGTAACAATCGGTGGTGGTTCATTTCTTGCAACTATGATCCTGTAGGTAACTGGGCCGGATAACGTCCTTATTGAGGTGTCGTTTATTTATGACATGTTGCTAGTATTAAATAAAATTTTCATATTACATGTCAAGGAGTTAAAATTTAAGTCTGGCAAGTGGATCGGATCGATCTCCTATATATCCAAGATGTTAAGGGATCAAAGATATAATTGTTATTTTGATTTCCCTTTGATGTTGCTAGTATGAATAATTCCACGTACCATATGTTCATGGTATCGTGGCTTAGGTTCTTTACTTTTTCAAAATTATGAAATTTATATACCTAAAAATTAAGTGGAGTAATTAATTGGGAAAACTACATAAGATAGATCCAATTATGAAAATTTATCTAATTTGGACTTTATTCAAACTTTTTATCTTTAATGGATCTATGCCACAAACAATTTATCCGTTTATCCACTTTCTCCTTTCTTATTTCACGTATGATATCAGAATAACGTTAGCATAACTATTATGAATTTATCTTTTGTGATATATCTTGTCAGTATCATATAGGATTTAACTCTTTTTTTAAAAATAATTAAGAAAAAATTATTAAAGTCACAATATTATTTACTAAACTCTACATTAGAAGAAATTATATTTTTTAAATTAAAATAGAGTTACCTCAATGATACCATGATACTATGTAGATATACTGCAATTGTATCATGGACGATTAAATATTCTCATCGAAGGACTAAAGCGAACCATAATGAAAACATTGTTCAATTACTCATTAATACCATCCGAGTATATTATACTTGATCATATCAAAGAGGAAGAAACAGTTCTTCAATGAAGACATTGTTTAATGACACTTTTATACCATCAGAGTATATTAATATATGACTGTATTATATTGTGATGATATAGTATATAATTGTATTTGATTTTCAAAATCACAGTGTAGTTTTGACGGACTCAAACTAGCAAGTCTTTTCCAAAACAAACAAGTAATTCCAAACAATTTGTATTATATTTTAATACGAACACAGTCAAATAAAAAAAGAGATAAGTGTCATAAATACACCTAAACTATACATTTTTTTGAGTTTTTTAAAATATTGAAAGTTTCATTACCTAACCTATCACTTTTTAGTTTGAGAAACACACCTCTCTCTTTTATACCACTTTCATCATGATATGTGTAATACACACTCTCTCTCTTTTATTTTAAAGAATTTTCACATCACACTCCACATGGACAAAATATTCAATCTTGACAAAAAATAAATAAATTATTAGTATTAGTTTAAATTAAAAATTAAGAAACTATTATAAAAAATAATATTTTCTTTATAAAAGAAAATGTAAAATATTTTTCTTATCCCGCGCTGTTTCTTAAAGTTTTTTATTTTGTTTAAATTTCTTTTATAAAAGTATTTCATTTTTTACTTCATCTCCTCCCCTTCATCAAATACTAATTTAAGTATTATTGTATTTGCTTAAAAATATAATTCTACCCATCTCACTTAATCCTCAGCTTTCAGTTTTTTCCCCAGTGTTTAGGTATATATATATCGAAAATATTTTTACTTGTTGTCATAAGACTTTTTATTTTTTTTAGTTGTTTATGTTATATTCGGTACACTAGTAGAATTTTTTTCTCTAAAAATATATGTACGTGCATATCTAACACAAAATAAGAAAAACGTAAAAAAAAAAATTAGAAGCGAAAAATTTAATAGGATGTGATAGATTTTCTAAAAATAAATAAGTATCAATTTCTATCCGGGGGGGGGGGTGTGTGGAGGGGAGGGGGTGGATGAAATATGAAATTTTTAAGAATATTTTATAAATAATTTTTTTTTTTAAAAAAAGGATGGGGATGTCGCGGGGGAGGGAGGGGGGTACGTAAAGAAGGTGGTGGAGTGAGATAAGAAAAATAATTTAATTTTTTATGTGCATAGTAATCTTTAATTTTTAATTAATATTAATTTTTTACTGTTTAATTTTTATCTAGATAAAATATTTTATCTATGTGGAATGTCATGTGTCAAAGTTTTTTAATATAAAAGAGAGAGTACACTATACACACCACTGAGATGTGTTTCTCAAACTAAAACGGGATAGTTTAAATATGAAACTCACACTTTCGATAGTTTAGATATGAAACTAAAAAATAAATAATTTAAATTTGTTTTTGATTCTTCTCTGTAAAATAAAATAATATATATATATATATATATATATATATATATATATATATATATATATATTATCACCGAACAAAGGGAAAATCAAAACTCTAATATATTATCATTCACCGAATCAAAATCAGTGAATTAAAAACTATATAAAAATCCATAAATAATTATGTGATGGAATAGGAATTCTACACACCATAGTGATTACCGTTGAACATCTTTCGCCAAAAAATTATATTTTATATATATACACGCTAGAAATTACTTAATGTGCGTAGATATAATTAAACATATCAAACTATTTATGCTATATTTAATACTTATTTAAATCGTAACTATTTATTCTAAATTCAGCTCTAACACTTTTTAAAAAGTTTTTAAAATTTTCTTTCGAAGCTACAAGGATTGAGGCAGTTTCTAATTTCCACATAAAGGACCAAAAAATTGTTTTGGTTTAAGTGTCTATCACTTCCATTGTTTGTTGTTTTCATTATATCCAAATTGCTTTCAATGACTAACAAATACTTGAGTCTTCTCTCTCTCATAGAATAACTTTCTTCCAATAAATCCACGTAAGGGCGGCTCAATAAGTGTTGTTTAATATTATCTAAATAATAGAGTAAAGTATGATTATTCTTTAAAGCATATAGTATTTCCTTAATCACACGACATGCAATCTCCTTTGAATTTTCTTCACATGTGAAATAAAATTCCACAAAGTTTAAATTTAACAATTTTCACAAATTTGATTAAATTGAACAATCAAAGTTTGATAAATATCTTATCGAAACCAAAAGTGTTCACTTTTGAAAAATATAAAGGACCAAAAAAGATCACTTTTGACAATCTTAAGGACCAAAATTGCTCTTATCATACATAAGGGAGTCTATTGAAACTACTAAAAAGATAAGGAAGCCTTTTTGTCATTTCTCTATAATTTCCTTTGAATTTTCTTCATACATGCTAAACAAAATTACACAATGTTTAATTATATATACACTATTTAAAGGACCAAAAGTAATTAATTCTAAAAAGTTTTAAGGACCAAAATCACTTAGCAAAATACACAAGAGACTATTTTGAACTTACTATCAAAGATAAGAGACCATTTTTATCATTTCCTCTACTAATAATTTCCTTTGAATTTTCTTCACACATACTTAGCAAAATTCCACAATTTTTACTTATAAATACACTACTTATCTCACGTTTATAATCACAATAACTTAGATTTATTTTCTCTCCACTAAACCTAAAGAAAAATGGGGTTGTTCAACATCTCATTGTTACTCACTTGTCTCATGGTATTAGCCATATTTCACTCTTGTGAGGCCCAAAATTCACCCCAAGACTATCTTGCGGTTCATAACGATGCCCGTGCCCAAGTCGGAGTCGGGCCTATGTCTTGGGATGCCAACTTGGCATCCCGAGCACAAAACTATGCCAACTCAAGAGCTGGTGATTGTAACTTGATTCATTCTGGTGCTGGGGAGAATCTTGCCAAGGGTGGTGGTGACTTCACGGGGAGGGCAGCCGTGCAATTGTGGGTGTCCGAGAGGCCAAGCTATAACTACGCTACCAACCAATGTGTTGGTGGAAAAAAGTGTAGACATTATACTCAAGTAGTCTGGCGCAACTCAGTCCGACTAGGTTGTGGTCGGGCACGTTGCAACAACGGATGGTGGTTCATTTCTTGCAACTATGATCCTGTAGGCAACTGGATCGGACAACGTCCTTACTAAAATGATGTATACTTATGACATGTTGCTAGTATTAAATAAAATTCTCATATGAGACGTCGAGAAGTTAAAATTTAAGTTTGACATATGAATCAAGTCAAACTCCTATCTAAAATATTAAGGGATTAAATATTGAACATCTATAATTATTATTATTTCCCTTTTGATGTTGCTAATATGAATAATTCCACATACCATATGTTCATAATGGGCTTAAGTTGATTATTAAGTACTGCATCTTCTTGTTTCCATAAAACATTAATATACATAAAATTTTAATTAAGCATGGCATATATTAATTAGGCACATCAAGCACTTATCTAAACACGTAACTATTTATTCATAAATTCAGTTTCAACCATTCAAAATATTTGTTCTATTTTAAGTGCCCATCAAAAAAAAATTCAATCATTACCCAATTTTTTTTCAATGACTAACAAATACTCAAGTCTTCCATATTCTCTCATACAATAATGGCCTAAAACTATATTTTCATAAAATATTTTATAGGTGAAAATTGAATTTCATCCTTTCTTGACCTATTGTCTTAGATTTGAATACCAGAAATAAAAACAAA</genome_strand>
        <mrna_strand>GGATAACGCCTTGGCAACCAAAGCACAAAGGTATGCTGACTCAAGAAGAGGTGATTGCAACTTGATTCATTTTGGTCCAGGAGAGAATCTTGCCAAGGGTAGTGGAGACTTCACGGGGAGGCGTGCCTCTGAATTGTGGGTGGCGGAGAAGCCAAACTACAACTATGGTACCAACCAATGTGCTAGTGGGAAAGTGTGCGGACACTATACTCAAGTAGTTTGGCGTAATTCTGTCAGGCTTGGTTGTGGTCGGGCTCGTTGCAACAACGGATGGTGGTTCATTTGTTGCAACTATCATCCCGTAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATTGGGTCGGACAACGTCCTTACTAAAGGGATGTTTACTTATGACATGTTGCTAGTATTAAATAAAATTCTCAAATGAGACGTCGAGAAGTTAACCTTTAAGGGGGCCATATGGATCAANTCAATCTCCTATCTAACCTTATAGGGGATTAAATATT-ACCTTCTAAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U314797" ref_strand="+" ref_description="SGN-U314797        Tomato 200607 #1 [175 ESTs aligned] arabidopsis/peptide: | Symbol: None | pathogenesis-related protein, putative, similar to SP:P33154 Pathogenesis-related protein 1 precursor (PR-1) {Arabidopsis thaliana}; contains Pfam profile PF00188: SCP-like extracellular protein | chr4:16182755-16183536 FORWARD | Aliases: T16L1.210, T16L1_210(evalue: 1e-48, score=192) genbank/nr: gi|19285|emb|CAA48672.1| P1(p14) protein [Lycopersicon esculentum] >gi|2529165|emb|CAA70042.1| PR protein [Lycopersicon esculentum] >gi|548587|sp|P04284|PR06_LYCES Pathogenesis-related leaf protein 6 precursor (P6) (Ethylene-induced protein P1) (P14) (P14A) (PR protein) >gi|170490|gb|AAA03616.1| pathogenesis-related protein P6 (evalue: 4e-93, score=345)">
      <seq>catatcaaactatttatgctatatttaatacttatttaaatcgtaactatttatttctaaattgcagctctaacactttttaaaaagtttttaaaattttctttcgaagctacaaggattgaggcagtttctaatttccacataaaggaccaaaaaattgttttggtttaagtgtgtctatcacttccattgtttgttgttttcattatatccattatatccaaattgctttcaatgactaacaaatacttgagtcttctctctctcatagaataactttcttccataaatccacgtaaggcggctcaataagtgttgtttaatattatctaaataatagagtaaagtatgattattctttaaagcatatagtatttccttaatcacacgacatgcaatctcctttgaattttcttcacatgtgaataaaattccacaaagtttaaatttaacaattttcacaaatttgattaaattgaacaatcaaagtttgataaatatcttatcgaaaccaaaagtgttcacttttgaaaaatataaaggaccaaaaaagatcacttttgacaatcttaaggaccaaaattgctcttatcatacataagggagtctattgaaactactaaaaagataaggaagcctttttgtcatttctctataatttcctttgaatttttcttcatacatgctaaacaaaattacacaatgtttaattatatatacactatttaaaggaccaaaagtaattaattctaaaaagttttaaggaccaaaatcacttagcaaaatacacaagagactattttgaacttactatcaaagataagagaccatttttatcatttcctctactaataatttcctttgaattttcttcacacatacttagcaaaattccacaatttttacttataaattggcggccaatcggccgaattgacaataacttagatttattttctctccactaaacctaaagaaaaatggggttgttcaacatctcattgttactcacttgtctcatggtattagccatatttcactcttgtgaggcccaaaattcaccccaagactatcttgcggttcataacgatgcccgtgcccaagtcggagtcgggcctatgtcttgggatgccaacttggcatcccgagcacaaaactatgccaactcaagagctggtgattgtaacttgattcattctggtgctggggagaatcttgccaagggtggtggtgacttcacggggagggcagccgtgcaattgtgggtgtccgagaggccaagctataactacgctaccaaccaatgtgttggtggaaaaaagtgtagacattatactcaagtagtctggcgcaactcagtccgactaggttgtggtcgggcacgttgcaacaacggatggtggttcatttcttgcaactatgatcctgtaggcaactggatcggacaacgtccttactaaaatgatgtatacttatgacatgttgctagtattaaataaaattctcatatgagacgtcgagaagttaaaatttaagtttgacatatgaatcaagtcaaactcctatctaaaatattaagggattaaatattgaacatctataattattattatttcccttttgatgttgctaatatgaataattccacataccatatgttcataatgggcttaagttgattattaagtactgcatcttcttgtttccaaaaaacattaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaataattaggcaggggggggacttatctaaacacgtaactatttattcataaattcagtttcaaccattcaaaatatttgttctattttaagtgcccatcaaaaaaaaattcaatcattacccaattttttttcaatgactaacaaatactcaagtcttccatattctctcatacaataatggcctaaaactatattttcataaaatattttataggtgaaaattgaatttcatcctttcttgacctattgtcttagatttgaataccagaaataaaaacaaatattgctatttattgaaaaaatttacgtagcatgaaattaaataaattggcacatatttaaaatatctcgtcaggaaaaaaaaattgtacccctaacaaacgtttaaatttaataattttcacaaatgttactaaatttaacaatgagagtttgataaatatctaatggtgaacagaaagtgttcactttcgaaaaacaaagaggaggaaaagtgatctattttgacaaatttaaggatcaaaattgatccaatcatacattagggactattttgaatctactataaaaatgataaggaaccatttttttgttttttcattttctctattaagtttctttgaattttcttcacacatgctaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0157E03.1" temp_strand="+" temp_description="C09HBa0157E03.1  AC234414.1 htgs_phase:1 submitted_to_sgn_as:gnl|gbrgsp|C09HBa0157E03 upload_account_name:spain (1 - 93835)">
        <position start="49200" stop="57606"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49500" g_stop="49708" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="213" r_length="213" r_score="0.962"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49709" i_stop="55117" i_length="5409">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55118" g_stop="57306" g_length="2189"/>
          <reference_exon_boundary r_type="cDNA" r_start="214" r_stop="2396" r_length="2183" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0157E03.1" gen_strand="+" ref_id="SGN-U314797" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>2398</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0157E03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U314797" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49500" e_stop="49708"/>
          <exon e_start="55118" e_stop="57306"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATATCAAACTATTTATGCTATATTTAATACTTATTTAAATCGTAACTATTTA-TTCTAAATT-CAGCTCTAACACTTTTTAAAAAGTTTTTAAAATTTTCTTTCGAAGCTACAAGGATTGAGGCAGTTTCTAATTTCCACATAAAGGACCAAAAAATTGTTTTGGTTTAA--GTGTCTATCACTTCCATTGTTTGTTGTTTTCATTATATCCAAATTGCTTTCAATGACTAACAAATACTTGAGTCTTCTCTCTCTCATAGAATAACTTTCTTCCAATAAATCCACGTAAGGGCGGCTCAATAAGTGTTGTTTAATATTATCTAAATAATAGAGTAAAGTATGATTATTCTTTAAAGCATATAGTATTTCCTTAATCACACGACATGCAATCTCCTTTGAATTTTCTTCACATGTGAAATAAAATTCCACAAAGTTTAAATTTAACAATTTTCACAAATTTGATTAAATTGAACAATCAAAGTTTGATAAATATCTTATCGAAACCAAAAGTGTTCACTTTTGAAAAATATAAAGGACCAAAAAAGATCACTTTTGACAATCTTAAGGACCAAAATTGCTCTTATCATACATAAGGGAGTCTATTGAAACTACTAAAAAGATAAGGAAGCCTTTTTGTCATTTCTCTATAATTTCCTTTGAATTTTCTTCATACATGCTAAACAAAATTACACAATGTTTAATTATATATACACTATTTAAAGGACCAAAAGTAATTAATTCTAAAAAGTTTTAAGGACCAAAATCACTTAGCAAAATACACAAGAGACTATTTTGAACTTACTATCAAAGATAAGAGACCATTTTTATCATTTCCTCTACTAATAATTTCCTTTGAATTTTCTTCACACATACTTAGCAAAATTCCACAATTTTTACTTATAAATACACTACTTATCTCACGTTTATAATCACAATAACTTAGATTTATTTTCTCTCCACTAAACCTAAAGAAAAATGGGGTTGTTCAACATCTCATTGTTACTCACTTGTCTCATGGTATTAGCCATATTTCACTCTTGTGAGGCCCAAAATTCACCCCAAGACTATCTTGCGGTTCATAACGATGCCCGTGCCCAAGTCGGAGTCGGGCCTATGTCTTGGGATGCCAACTTGGCATCCCGAGCACAAAACTATGCCAACTCAAGAGCTGGTGATTGTAACTTGATTCATTCTGGTGCTGGGGAGAATCTTGCCAAGGGTGGTGGTGACTTCACGGGGAGGGCAGCCGTGCAATTGTGGGTGTCCGAGAGGCCAAGCTATAACTACGCTACCAACCAATGTGTTGGTGGAAAAAAGTGTAGACATTATACTCAAGTAGTCTGGCGCAACTCAGTCCGACTAGGTTGTGGTCGGGCACGTTGCAACAACGGATGGTGGTTCATTTCTTGCAACTATGATCCTGTAGGCAACTGGATCGGACAACGTCCTTACTAAAATGATGTATACTTATGACATGTTGCTAGTATTAAATAAAATTCTCATATGAGACGTCGAGAAGTTAAAATTTAAGTTTGACATATGAATCAAGTCAAACTCCTATCTAAAATATTAAGGGATTAAATATTGAACATCTATAATTATTATTATTTCCCTTTTGATGTTGCTAATATGAATAATTCCACATACCATATGTTCATAATGGGCTTAAGTTGATTATTAAGTACTGCATCTTCTTGTTTCCATAAAACATTAATATACATAAAATTTTAATTAAGCATGGCATATATTAATTAGGCACATCAAGCACTTATCTAAACACGTAACTATTTATTCATAAATTCAGTTTCAACCATTCAAAATATTTGTTCTATTTTAAGTGCCCATCAAAAAAAAATTCAATCATTACCCAATTTTTTTTCAATGACTAACAAATACTCAAGTCTTCCATATTCTCTCATACAATAATGGCCTAAAACTATATTTTCATAAAATATTTTATAGGTGAAAATTGAATTTCATCCTTTCTTGACCTATTGTCTTAGATTTGAATACCAGAAATAAAAACAAATATTGCTATTTATTGAAAAAATTTACGTAGCATGAAATTAAATAAATTGGCACATATTTAAAATATCTCGTCAGGAAAAAAAAATTGTACCCCTAACAAACGTTTAAATTTAATAATTTTCACAAATGTTACTAAATTTAACAATGAGAGTTTGATAAATATCTAATCGTGAACAGAAAGTGTTCACTTTCGAAAAACAAAGAGGACCAAAAGTGATCTATTTTGACAAATTTAAGGATCAAAATTGATCCAATCATACATTAGGGACTATTTTGAATCTACTATAAAAATGATAAGGAACCATTTTTTTGTTTTTTCATTTTCTCTATTAAGTTTCTTTGAATTTTCTTCACACATGCTAAACAAAATTCCACATATTTACTTATATATATACTATACTTATCTCACATTCATAATCACAATAATTTAGATTTCTTTTCTCTCTACTACTCCTATAGCAAAATGGGGTTGTTTAACATCTCATTTTTGCTCATTAGTCTCATGGTATTAACCATATTTCACACTTGTGATTCCCAAAATTCACCCCAAGACTATTTTGCGGTTCACAACGATGCCTGCGCCCAAGTTGGAGTTGGGCCAATGTCTTAGGATGCTTCACAACGATGCCCGCGCCCAAGTTGGAATTGGGCCAATGTCTTAGGATGCTGGCTTGGCATCTCGAGCACAAAATTATGCCAACTCAAGAGCTGGTAATTGCAACTTGATTCATTCTGGTGCATGGGAGAACCTTGCCAAGACCGGTGGTAATTTCACGGGGAGGGCCGCCGTGCAATTGTGGGTATCGAAAAAGCTAAACTACAACTACGGTACCCACCAATGTGCTAGCGGGCAAATGTGCGGACATTATACTCAAGTAGTTGGCGCAACTCAGTCCGACTAGGTTGTGGTCGGGTTCGTTGTAACAACGGGTGGTGGTTCATTTCTTGCAACTATGATCATGTAGGCAACTGGGCCGGAAAACGTCCTTATTAAGGTGTCGTTTATTTATGACATATTGCTAGTATTAAATAAAATTTTTATATTACATGTCAAGGAGTTAAAATTTAAATCTGGCAAGTGGATCGGATCGATCTCCTATATATCCAAGATGTTAAGGGATCAAATATATAATTATTGTTTTGATTTCCCTTTGATATTGCTAGTATGAATAATTCCACGTATCATATGTTCATGGTATCGTGCTTAGGTTCTTTACTTTTTCAAAATTATGAAATTTATATATTAAAAAATTAAGTGGAGTAATTAATTGGGAAAACTACATAGATAGATCCAATTATGAAAATTTATCTAATTTGGACTTTATTCAAACTTTTTATCTTTAATGGATCTATGCCACAAACAATTTATCCGTTTATCCACTTTCTCCTTTCTTATTTCACGTATGATATCAGAATAACGTTAGCATAACTATTATGAATTTATCTTTTGTGATATATCTTGTCAGTATCATATAGGATTTAACTCTTTTTTTAAAAATAATTAAGAAAAAATTATTAAAGTCACAATATTATTTACTAAACTCTACATTAGAAGAAATTATATTTTTTAAATTAGAATAGAGTTACCCTCAATGATACCATGATACTATGTAGATATACTGCAATTGTATCATGGACGATTAAATATTCTCATCGAAGGACTAAAGCGAACCATAATGAAAACATTGTTCAATTACTCATTAATACCATCCGAGTATATTATACTTGATCATATCAAAGAGGAAGAAACAGTTCTTCAATGAAGACATTGTTTAATGACACTTTTATACCATCAGAGTATATTAATATATGACTGTATTATATTGTGATGATATAGTATATAATTGTATTTGATTTTCAAAATCACAGTGTAGTTTTGACGGACTCAAACTAGCAAGTCTTTTCCAAAACAAACAAGTAATTCCAAACAATTTGTATTATATTTTAATACGAACACAGTCAAATAAAAAAAGAGATAAGTGTCATAAATACACCTAAACTATACATTTTTTTGAGTTTTTTAAAATATTGAAAGTTTCATTACCTAACCTATCACTTTTTAGTTTGAGAAACACACCTCTCTCTTTTATACCACTTTCATCATGATATGTGTAATACACACTCTCTCTCTTTTATTTTAAAGAATTTTCACATCACACTCCACATGGACAAAATATTCAATCTTGACAAAAAATAAATAAATTATTAGTATTAGTTAAAATTAAAAATTAAGAAACTATTATAAAAAATAATATTTTCTTTATAAAAGAAAATGTAAAATATTTTTCTTATCCCGCGCTGTTTCTTAAAGTTTTTTATTTTGTTTAAATTTCTTTTATAAAAGTATTTCATTTTTTACTTCATCTCCTCCCCTTCATCAAATACTAATTTAAGTATTATTGTATTTGCTTAAAAATATAATTCTACCCATCTCACTTAATCCTCAGCTTTCAGTTTTTTCCCCAGTGTTTAGGTATATATATATCGAAAATATTTTTACTTGTTGTCATAAGACTTTTTATTTTTTTTAGTTGTTTATGTTATATTCGGTACACTAGTAGAATTTTTTTCTCTAAAAATATATGTACGTGCATATCTAACACAAAATAAGAAAAACGTAAAAAAAAAAATTAGAAGCGAAAAATTTAATAGGATGTGATAGATTTTCTAAAAATAAATAAGTATCAATTTCTATCCGGGGGGGGGGGGTGTGGAGGGGAGGGGGTGGATGAAATATGAAATTTTTAAGAATATTTTATAAATAATTTTTTTTTTAAAAAAAGGATGGGGATGTCGCGGGGGAGGGAGGGGGGTACGTAAAGAAGGTGGTGGAGTGAGATAAGAAAAATAATTTAATTTTTTATGTGCATAGTAATCTTTAATTTTTAATTAATATTAATTTTTTACTGTTTAATTTTTATCTAGATAAAATATTTTATCTATGTGGAATGTCATGTGTCAAAGTTTTTTAATATAAAAGAGAGAGTACACTATACACACCACTGAGATGTGTTTCTCAAACTAAAACGGGATAGTTTAAATATGAAACTCACACTTTCGATAGTTTAGATATGAAACTAAAAAATAAATAATTTAAATTTGTTTTTGATTCTTCTCTGTAAAATAAAATAAAATATATATATATATATATATATATATATATATATATATATATTATCACCGAACAAAGGGAAAATCAAAACTCTAATATATTATCATTCACCGAATCAAAATCAGTGAATTAAAAACTATATAAAAATCCATAAATAATTATGTGATGGAATAGGAATTCTACACACCATAGTGATTACCGTTGAACATCTTTCGCCAAAAAATTATATTTTATATATATACACGCTAGAAATTACTTAATGTGCGTAGATATAATTAAACATATCAAACTATTTATGCTATATTTAATACTTATTTAAATCGTAACTATTTATTCTAAATTCAGCTCTAACACTTTTTAAAAAGTTTTTAAAATTTTCTTTCGAAGCTACAAGGATTGAGGCAGTTTCTAATTTCCACATAAAGGACCAAAAAATTGTTTTGGTTTAAGTGTCTATCACTTCCATTGTTTGTTGTTTTCATTATATCCAAATTGCTTTCAATGACTAACAAATACTTGAGTCTTCTCTCTCTCATAGAATAACTTTCTTCCAATAAATCCACGTAAGGGCGGCTCAATAAGTGTTGTTTAATATTATCTAAATAATAGAGTAAAGTATGATTATTCTTTAAAGCATATAGTATTTCCTTAATCACACGACATGCAATCTCCTTTGAATTTTCTTCACATGTGAAATAAAATTCCACAAAGTTTAAATTTAACAATTTTCACAAATTTGATTAAATTGAACAATCAAAGTTTGATAAATATCTTATCGAAACCAAAAGTGTTCACTTTTGAAAAATATAAAGGACCAAAAAAGATCACTTTTGACAATCTTAAGGACCAAAATTGCTCTTATCATACATAAGGGAGTCTATTGAAACTACTAAAAAGATAAGGAAGCCTTTTTGTCATTTCTCTATAATTTCCTTTGAA-TTTTCTTCATACATGCTAAACAAAATTACACAATGTTTAATTATATATACACTATTTAAAGGACCAAAAGTAATTAATTCTAAAAAGTTTTAAGGACCAAAATCACTTAGCAAAATACACAAGAGACTATTTTGAACTTACTATCAAAGATAAGAGACCATTTTTATCATTTCCTCTACTAATAATTTCCTTTGAATTTTCTTCACACATACTTAGCAAAATTCCACAATTTTTACTTATAAATACACTACTTATCTCACGTTTATAATCACAATAACTTAGATTTATTTTCTCTCCACTAAACCTAAAGAAAAATGGGGTTGTTCAACATCTCATTGTTACTCACTTGTCTCATGGTATTAGCCATATTTCACTCTTGTGAGGCCCAAAATTCACCCCAAGACTATCTTGCGGTTCATAACGATGCCCGTGCCCAAGTCGGAGTCGGGCCTATGTCTTGGGATGCCAACTTGGCATCCCGAGCACAAAACTATGCCAACTCAAGAGCTGGTGATTGTAACTTGATTCATTCTGGTGCTGGGGAGAATCTTGCCAAGGGTGGTGGTGACTTCACGGGGAGGGCAGCCGTGCAATTGTGGGTGTCCGAGAGGCCAAGCTATAACTACGCTACCAACCAATGTGTTGGTGGAAAAAAGTGTAGACATTATACTCAAGTAGTCTGGCGCAACTCAGTCCGACTAGGTTGTGGTCGGGCACGTTGCAACAACGGATGGTGGTTCATTTCTTGCAACTATGATCCTGTAGGCAACTGGATCGGACAACGTCCTTACTAAAATGATGTATACTTATGACATGTTGCTAGTATTAAATAAAATTCTCATATGAGACGTCGAGAAGTTAAAATTTAAGTTTGACATATGAATCAAGTCAAACTCCTATCTAAAATATTAAGGGATTAAATATTGAACATCTATAATTATTATTATTTCCCTTTTGATGTTGCTAATATGAATAATTCCACATACCATATGTTCATAATGGGCTTAAGTTGATTATTAAGTACTGCATCTTCTTGTTTCCATAAAACATTAATATACATAAAATTTTAATTAAGCATGGCATATATTAATTAGGCACATCAAGCACTTATCTAAACACGTAACTATTTATTCATAAATTCAGTTTCAACCATTCAAAATATTTGTTCTATTTTAAGTGCCCATCAAAAAAAAATTCAATCATTACCCAATTTTTTTTCAATGACTAACAAATACTCAAGTCTTCCATATTCTCTCATACAATAATGGCCTAAAACTATATTTTCATAAAATATTTTATAGGTGAAAATTGAATTTCATCCTTTCTTGACCTATTGTCTTAGATTTGAATACCAGAAATAAAAACAAATATTGCTATTTATTGAAAAAATTTACGTAGCATGAAATTAAATAAATTGGCACATATTTAAAATATCTCGTCAGGAAAAAAAAATTGTACCCCTAACAAACGTTTAAATTTAATAATTTTCACAAATGTTACTAAATTTAACAATGAGAGTTTGATAAATATCTAATCGTGAACAGAAAGTGTTCACTTTCGAAAAACAAAGAGGACCAAAAGTGATCTATTTTGACAAATTTAAGGATCAAAATTGATCCAATCATACATTAGGGACTATTTTGAATCTACTATAAAAATGATAAGGAACCATTTTTTTGTTTTTTCATTTTCTCTATTAAGTTTCTTTGAATTTTCTTCACACATGCTAA</genome_strand>
        <mrna_strand>CATATCAAACTATTTATGCTATATTTAATACTTATTTAAATCGTAACTATTTATTTCTAAATTGCAGCTCTAACACTTTTTAAAAAGTTTTTAAAATTTTCTTTCGAAGCTACAAGGATTGAGGCAGTTTCTAATTTCCACATAAAGGACCAAAAAATTGTTTTGGTTTAAGTGTGTCTATCACTTCCATTGTTTGTTGTTTTCATTATATCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATATCCAAATTGCTTTCAATGACTAACAAATACTTGAGTCTTCTCTCTCTCATAGAATAACTTTCTTCC-ATAAATCCACGTAA-GGCGGCTCAATAAGTGTTGTTTAATATTATCTAAATAATAGAGTAAAGTATGATTATTCTTTAAAGCATATAGTATTTCCTTAATCACACGACATGCAATCTCCTTTGAATTTTCTTCACATGTG-AATAAAATTCCACAAAGTTTAAATTTAACAATTTTCACAAATTTGATTAAATTGAACAATCAAAGTTTGATAAATATCTTATCGAAACCAAAAGTGTTCACTTTTGAAAAATATAAAGGACCAAAAAAGATCACTTTTGACAATCTTAAGGACCAAAATTGCTCTTATCATACATAAGGGAGTCTATTGAAACTACTAAAAAGATAAGGAAGCCTTTTTGTCATTTCTCTATAATTTCCTTTGAATTTTTCTTCATACATGCTAAACAAAATTACACAATGTTTAATTATATATACACTATTTAAAGGACCAAAAGTAATTAATTCTAAAAAGTTTTAAGGACCAAAATCACTTAGCAAAATACACAAGAGACTATTTTGAACTTACTATCAAAGATAAGAGACCATTTTTATCATTTCCTCTACTAATAATTTCCTTTGAATTTTCTTCACACATACTTAGCAAAATTCCACAATTTTTACTTATAAATTGGCGGCCAATCGGCCG---A-ATTGACAATAACTTAGATTTATTTTCTCTCCACTAAACCTAAAGAAAAATGGGGTTGTTCAACATCTCATTGTTACTCACTTGTCTCATGGTATTAGCCATATTTCACTCTTGTGAGGCCCAAAATTCACCCCAAGACTATCTTGCGGTTCATAACGATGCCCGTGCCCAAGTCGGAGTCGGGCCTATGTCTTGGGATGCCAACTTGGCATCCCGAGCACAAAACTATGCCAACTCAAGAGCTGGTGATTGTAACTTGATTCATTCTGGTGCTGGGGAGAATCTTGCCAAGGGTGGTGGTGACTTCACGGGGAGGGCAGCCGTGCAATTGTGGGTGTCCGAGAGGCCAAGCTATAACTACGCTACCAACCAATGTGTTGGTGGAAAAAAGTGTAGACATTATACTCAAGTAGTCTGGCGCAACTCAGTCCGACTAGGTTGTGGTCGGGCACGTTGCAACAACGGATGGTGGTTCATTTCTTGCAACTATGATCCTGTAGGCAACTGGATCGGACAACGTCCTTACTAAAATGATGTATACTTATGACATGTTGCTAGTATTAAATAAAATTCTCATATGAGACGTCGAGAAGTTAAAATTTAAGTTTGACATATGAATCAAGTCAAACTCCTATCTAAAATATTAAGGGATTAAATATTGAACATCTATAATTATTATTATTTCCCTTTTGATGTTGCTAATATGAATAATTCCACATACCATATGTTCATAATGGGCTTAAGTTGATTATTAAGTACTGCATCTTCTTGTTTCCAAAAAACATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAATTAGGCAGGGGGGGGACTTATCTAAACACGTAACTATTTATTCATAAATTCAGTTTCAACCATTCAAAATATTTGTTCTATTTTAAGTGCCCATCAAAAAAAAATTCAATCATTACCCAATTTTTTTTCAATGACTAACAAATACTCAAGTCTTCCATATTCTCTCATACAATAATGGCCTAAAACTATATTTTCATAAAATATTTTATAGGTGAAAATTGAATTTCATCCTTTCTTGACCTATTGTCTTAGATTTGAATACCAGAAATAAAAACAAATATTGCTATTTATTGAAAAAATTTACGTAGCATGAAATTAAATAAATTGGCACATATTTAAAATATCTCGTCAGGAAAAAAAAATTGTACCCCTAACAAACGTTTAAATTTAATAATTTTCACAAATGTTACTAAATTTAACAATGAGAGTTTGATAAATATCTAATGGTGAACAGAAAGTGTTCACTTTCGAAAAACAAAGAGGAGGAAAAGTGATCTATTTTGACAAATTTAAGGATCAAAATTGATCCAATCATACATTAGGGACTATTTTGAATCTACTATAAAAATGATAAGGAACCATTTTTTTGTTTTTTCATTTTCTCTATTAAGTTTCTTTGAATTTTCTTCACACATGCTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U339131" ref_strand="+" ref_description="SGN-U339131        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | pathogenesis-related protein, putative, similar to SP:P33154 Pathogenesis-related protein 1 precursor (PR-1) {Arabidopsis thaliana}; contains Pfam profile PF00188: SCP-like extracellular protein | chr2:6232617-6233306 REVERSE | Aliases: T13P21.4, T13P21_4(evalue: 2e-26, score=107) genbank/nr: gi|21726980|emb|CAD38276.1| pathogenesis related protein isoform b1 [Solanum phureja](evalue: 4e-45, score=160)">
      <seq>cggccgaattgaaataatttagatttcttttctctctactactcctatagcaaaatggggttgtttaacatctcatttttgctcatgagtctcatggtattaaccatatttcacacttgtgattcccaaaattcaccccaagactattttgcggttcacaacgatgcctgcgcccaagttggagttgggccaatgtcttaggatgcttcacaacgatgcccgcgcccaagttggaattgggccaatgtcttaggatgctggcttggcatctcgagcacaaaattatgccaactcaagagctggtaattgcaacttgattcattctggtgcatgggagaaccttgccaagaccggtggtaatttcacggggagggcggccgtgcaattgtgggtatcgaaaaagctaaactacaactacggtacccaccaatgtgctagcgggcaaatgtgcggacattatactcaagtagttggcgcaactcagtccgactaggttgtggtcgggttcgttgtacaacgagtggtggttcatttcttgcaactatgatcatgtaggcaactgggccggaaaacgtccttattaaggtgtcgtttatttatgacatattgctagtattaaataaaatttttatattacatgtccnacaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0157E03.1" temp_strand="+" temp_description="C09HBa0157E03.1  AC234414.1 htgs_phase:1 submitted_to_sgn_as:gnl|gbrgsp|C09HBa0157E03 upload_account_name:spain (1 - 93835)">
        <position start="51641" stop="52877"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51935" g_stop="52574" g_length="640"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="639" r_length="639" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="645" polyA_stop="690"/>
      <MATCH_line gen_id="C09HBa0157E03.1" gen_strand="+" ref_id="SGN-U339131" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>640</cumulative_length_of_scored_exons>
        <coverage percentage="0.928" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0157E03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U339131" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51935" e_stop="52574"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCATAATCACAATAATTTAGATTTCTTTTCTCTCTACTACTCCTATAGCAAAATGGGGTTGTTTAACATCTCATTTTTGCTCATTAGTCTCATGGTATTAACCATATTTCACACTTGTGATTCCCAAAATTCACCCCAAGACTATTTTGCGGTTCACAACGATGCCTGCGCCCAAGTTGGAGTTGGGCCAATGTCTTAGGATGCTTCACAACGATGCCCGCGCCCAAGTTGGAATTGGGCCAATGTCTTAGGATGCTGGCTTGGCATCTCGAGCACAAAATTATGCCAACTCAAGAGCTGGTAATTGCAACTTGATTCATTCTGGTGCATGGGAGAACCTTGCCAAGACCGGTGGTAATTTCACGGGGAGGGCCGCCGTGCAATTGTGGGTATCGAAAAAGCTAAACTACAACTACGGTACCCACCAATGTGCTAGCGGGCAAATGTGCGGACATTATACTCAAGTAGTTGGCGCAACTCAGTCCGACTAGGTTGTGGTCGGGTTCGTTGTAACAACGGGTGGTGGTTCATTTCTTGCAACTATGATCATGTAGGCAACTGGGCCGGAAAACGTCCTTATTAAGGTGTCGTTTATTTATGACATATTGCTAGTATTAAATAAAATTTTTATATTACAT</genome_strand>
        <mrna_strand>CGGCCGAATTGAAATAATTTAGATTTCTTTTCTCTCTACTACTCCTATAGCAAAATGGGGTTGTTTAACATCTCATTTTTGCTCATGAGTCTCATGGTATTAACCATATTTCACACTTGTGATTCCCAAAATTCACCCCAAGACTATTTTGCGGTTCACAACGATGCCTGCGCCCAAGTTGGAGTTGGGCCAATGTCTTAGGATGCTTCACAACGATGCCCGCGCCCAAGTTGGAATTGGGCCAATGTCTTAGGATGCTGGCTTGGCATCTCGAGCACAAAATTATGCCAACTCAAGAGCTGGTAATTGCAACTTGATTCATTCTGGTGCATGGGAGAACCTTGCCAAGACCGGTGGTAATTTCACGGGGAGGGCGGCCGTGCAATTGTGGGTATCGAAAAAGCTAAACTACAACTACGGTACCCACCAATGTGCTAGCGGGCAAATGTGCGGACATTATACTCAAGTAGTTGGCGCAACTCAGTCCGACTAGGTTGTGGTCGGGTTCGTTGT-ACAACGAGTGGTGGTTCATTTCTTGCAACTATGATCATGTAGGCAACTGGGCCGGAAAACGTCCTTATTAAGGTGTCGTTTATTTATGACATATTGCTAGTATTAAATAAAATTTTTATATTACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U339131" ref_strand="+" ref_description="SGN-U339131        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | pathogenesis-related protein, putative, similar to SP:P33154 Pathogenesis-related protein 1 precursor (PR-1) {Arabidopsis thaliana}; contains Pfam profile PF00188: SCP-like extracellular protein | chr2:6232617-6233306 REVERSE | Aliases: T13P21.4, T13P21_4(evalue: 2e-26, score=107) genbank/nr: gi|21726980|emb|CAD38276.1| pathogenesis related protein isoform b1 [Solanum phureja](evalue: 4e-45, score=160)">
      <seq>cggccgaattgaaataatttagatttcttttctctctactactcctatagcaaaatggggttgtttaacatctcatttttgctcatgagtctcatggtattaaccatatttcacacttgtgattcccaaaattcaccccaagactattttgcggttcacaacgatgcctgcgcccaagttggagttgggccaatgtcttaggatgcttcacaacgatgcccgcgcccaagttggaattgggccaatgtcttaggatgctggcttggcatctcgagcacaaaattatgccaactcaagagctggtaattgcaacttgattcattctggtgcatgggagaaccttgccaagaccggtggtaatttcacggggagggcggccgtgcaattgtgggtatcgaaaaagctaaactacaactacggtacccaccaatgtgctagcgggcaaatgtgcggacattatactcaagtagttggcgcaactcagtccgactaggttgtggtcgggttcgttgtacaacgagtggtggttcatttcttgcaactatgatcatgtaggcaactgggccggaaaacgtccttattaaggtgtcgtttatttatgacatattgctagtattaaataaaatttttatattacatgtccnacaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0157E03.1" temp_strand="+" temp_description="C09HBa0157E03.1  AC234414.1 htgs_phase:1 submitted_to_sgn_as:gnl|gbrgsp|C09HBa0157E03 upload_account_name:spain (1 - 93835)">
        <position start="57059" stop="58295"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57353" g_stop="57992" g_length="640"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="639" r_length="639" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="645" polyA_stop="690"/>
      <MATCH_line gen_id="C09HBa0157E03.1" gen_strand="+" ref_id="SGN-U339131" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>640</cumulative_length_of_scored_exons>
        <coverage percentage="0.928" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0157E03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U339131" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57353" e_stop="57992"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCATAATCACAATAATTTAGATTTCTTTTCTCTCTACTACTCCTATAGCAAAATGGGGTTGTTTAACATCTCATTTTTGCTCATTAGTCTCATGGTATTAACCATATTTCACACTTGTGATTCCCAAAATTCACCCCAAGACTATTTTGCGGTTCACAACGATGCCTGCGCCCAAGTTGGAGTTGGGCCAATGTCTTAGGATGCTTCACAACGATGCCCGCGCCCAAGTTGGAATTGGGCCAATGTCTTAGGATGCTGGCTTGGCATCTCGAGCACAAAATTATGCCAACTCAAGAGCTGGTAATTGCAACTTGATTCATTCTGGTGCATGGGAGAACCTTGCCAAGACCGGTGGTAATTTCACGGGGAGGGCCGCCGTGCAATTGTGGGTATCGAAAAAGCTAAACTACAACTACGGTACCCACCAATGTGCTAGCGGGCAAATGTGCGGACATTATACTCAAGTAGTTGGCGCAACTCAGTCCGACTAGGTTGTGGTCGGGTTCGTTGTAACAACGGGTGGTGGTTCATTTCTTGCAACTATGATCATGTAGGCAACTGGGCCGGAAAACGTCCTTATTAAGGTGTCGTTTATTTATGACATATTGCTAGTATTAAATAAAATTTTTATATTACAT</genome_strand>
        <mrna_strand>CGGCCGAATTGAAATAATTTAGATTTCTTTTCTCTCTACTACTCCTATAGCAAAATGGGGTTGTTTAACATCTCATTTTTGCTCATGAGTCTCATGGTATTAACCATATTTCACACTTGTGATTCCCAAAATTCACCCCAAGACTATTTTGCGGTTCACAACGATGCCTGCGCCCAAGTTGGAGTTGGGCCAATGTCTTAGGATGCTTCACAACGATGCCCGCGCCCAAGTTGGAATTGGGCCAATGTCTTAGGATGCTGGCTTGGCATCTCGAGCACAAAATTATGCCAACTCAAGAGCTGGTAATTGCAACTTGATTCATTCTGGTGCATGGGAGAACCTTGCCAAGACCGGTGGTAATTTCACGGGGAGGGCGGCCGTGCAATTGTGGGTATCGAAAAAGCTAAACTACAACTACGGTACCCACCAATGTGCTAGCGGGCAAATGTGCGGACATTATACTCAAGTAGTTGGCGCAACTCAGTCCGACTAGGTTGTGGTCGGGTTCGTTGT-ACAACGAGTGGTGGTTCATTTCTTGCAACTATGATCATGTAGGCAACTGGGCCGGAAAACGTCCTTATTAAGGTGTCGTTTATTTATGACATATTGCTAGTATTAAATAAAATTTTTATATTACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U339131" ref_strand="+" ref_description="SGN-U339131        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | pathogenesis-related protein, putative, similar to SP:P33154 Pathogenesis-related protein 1 precursor (PR-1) {Arabidopsis thaliana}; contains Pfam profile PF00188: SCP-like extracellular protein | chr2:6232617-6233306 REVERSE | Aliases: T13P21.4, T13P21_4(evalue: 2e-26, score=107) genbank/nr: gi|21726980|emb|CAD38276.1| pathogenesis related protein isoform b1 [Solanum phureja](evalue: 4e-45, score=160)">
      <seq>cggccgaattgaaataatttagatttcttttctctctactactcctatagcaaaatggggttgtttaacatctcatttttgctcatgagtctcatggtattaaccatatttcacacttgtgattcccaaaattcaccccaagactattttgcggttcacaacgatgcctgcgcccaagttggagttgggccaatgtcttaggatgcttcacaacgatgcccgcgcccaagttggaattgggccaatgtcttaggatgctggcttggcatctcgagcacaaaattatgccaactcaagagctggtaattgcaacttgattcattctggtgcatgggagaaccttgccaagaccggtggtaatttcacggggagggcggccgtgcaattgtgggtatcgaaaaagctaaactacaactacggtacccaccaatgtgctagcgggcaaatgtgcggacattatactcaagtagttggcgcaactcagtccgactaggttgtggtcgggttcgttgtacaacgagtggtggttcatttcttgcaactatgatcatgtaggcaactgggccggaaaacgtccttattaaggtgtcgtttatttatgacatattgctagtattaaataaaatttttatattacatgtccnacaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0157E03.1" temp_strand="-" temp_description="C09HBa0157E03.1  AC234414.1 htgs_phase:1 submitted_to_sgn_as:gnl|gbrgsp|C09HBa0157E03 upload_account_name:spain (1 - 93835)">
        <position start="65782" stop="64546"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65488" g_stop="64849" g_length="640"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="639" r_length="639" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="645" polyA_stop="690"/>
      <MATCH_line gen_id="C09HBa0157E03.1" gen_strand="-" ref_id="SGN-U339131" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>640</cumulative_length_of_scored_exons>
        <coverage percentage="0.928" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0157E03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U339131" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65488" e_stop="64849"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCATAATCACAATAATTTAGATTTCTTTTCTCTCTACTACTCCTATAGCAAAATGGGGTTGTTTAACATCTCATTTTTGCTCATTAGTCTCATGGTATTAACCATATTTCACACTTGTGATTCCCAAAATTCACCCCAAGACTATTTTGCGGTTCACAACGATGCCTGCGCCCAAGTTGGAGTTGGGCCAATGTCTTAGGATGCTTCACAACGATGCCCGCGCCCAAGTTGGAATTGGGCCAATGTCTTAGGATGCTGGCTTGGCATCTCGAGCACAAAATTATGCCAACTCAAGAGCTGGTAATTGCAACTTGATTCATTCTGGTGCATGGGAGAACCTTGCCAAGACCGGTGGTAATTTCACGGGGAGGGCCGCCGTGCAATTGTGGGTATCGAAAAAGCTAAACTACAACTACGGTACCCACCAATGTGCTAGCGGGCAAATGTGCGGACATTATACTCAAGTAGTTGGCGCAACTCAGTCCGACTAGGTTGTGGTCGGGTTCGTTGTAACAACGGGTGGTGGTTCATTTCTTGCAACTATGATCATGTAGGCAACTGGGCCGGAAAACGTCCTTATTAAGGTGTCGTTTATTTATGACATATTGCTAGTATTAAATAAAATTTTTATATTACAT</genome_strand>
        <mrna_strand>CGGCCGAATTGAAATAATTTAGATTTCTTTTCTCTCTACTACTCCTATAGCAAAATGGGGTTGTTTAACATCTCATTTTTGCTCATGAGTCTCATGGTATTAACCATATTTCACACTTGTGATTCCCAAAATTCACCCCAAGACTATTTTGCGGTTCACAACGATGCCTGCGCCCAAGTTGGAGTTGGGCCAATGTCTTAGGATGCTTCACAACGATGCCCGCGCCCAAGTTGGAATTGGGCCAATGTCTTAGGATGCTGGCTTGGCATCTCGAGCACAAAATTATGCCAACTCAAGAGCTGGTAATTGCAACTTGATTCATTCTGGTGCATGGGAGAACCTTGCCAAGACCGGTGGTAATTTCACGGGGAGGGCGGCCGTGCAATTGTGGGTATCGAAAAAGCTAAACTACAACTACGGTACCCACCAATGTGCTAGCGGGCAAATGTGCGGACATTATACTCAAGTAGTTGGCGCAACTCAGTCCGACTAGGTTGTGGTCGGGTTCGTTGT-ACAACGAGTGGTGGTTCATTTCTTGCAACTATGATCATGTAGGCAACTGGGCCGGAAAACGTCCTTATTAAGGTGTCGTTTATTTATGACATATTGCTAGTATTAAATAAAATTTTTATATTACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U314797" ref_strand="+" ref_description="SGN-U314797        Tomato 200607 #1 [175 ESTs aligned] arabidopsis/peptide: | Symbol: None | pathogenesis-related protein, putative, similar to SP:P33154 Pathogenesis-related protein 1 precursor (PR-1) {Arabidopsis thaliana}; contains Pfam profile PF00188: SCP-like extracellular protein | chr4:16182755-16183536 FORWARD | Aliases: T16L1.210, T16L1_210(evalue: 1e-48, score=192) genbank/nr: gi|19285|emb|CAA48672.1| P1(p14) protein [Lycopersicon esculentum] >gi|2529165|emb|CAA70042.1| PR protein [Lycopersicon esculentum] >gi|548587|sp|P04284|PR06_LYCES Pathogenesis-related leaf protein 6 precursor (P6) (Ethylene-induced protein P1) (P14) (P14A) (PR protein) >gi|170490|gb|AAA03616.1| pathogenesis-related protein P6 (evalue: 4e-93, score=345)">
      <seq>catatcaaactatttatgctatatttaatacttatttaaatcgtaactatttatttctaaattgcagctctaacactttttaaaaagtttttaaaattttctttcgaagctacaaggattgaggcagtttctaatttccacataaaggaccaaaaaattgttttggtttaagtgtgtctatcacttccattgtttgttgttttcattatatccattatatccaaattgctttcaatgactaacaaatacttgagtcttctctctctcatagaataactttcttccataaatccacgtaaggcggctcaataagtgttgtttaatattatctaaataatagagtaaagtatgattattctttaaagcatatagtatttccttaatcacacgacatgcaatctcctttgaattttcttcacatgtgaataaaattccacaaagtttaaatttaacaattttcacaaatttgattaaattgaacaatcaaagtttgataaatatcttatcgaaaccaaaagtgttcacttttgaaaaatataaaggaccaaaaaagatcacttttgacaatcttaaggaccaaaattgctcttatcatacataagggagtctattgaaactactaaaaagataaggaagcctttttgtcatttctctataatttcctttgaatttttcttcatacatgctaaacaaaattacacaatgtttaattatatatacactatttaaaggaccaaaagtaattaattctaaaaagttttaaggaccaaaatcacttagcaaaatacacaagagactattttgaacttactatcaaagataagagaccatttttatcatttcctctactaataatttcctttgaattttcttcacacatacttagcaaaattccacaatttttacttataaattggcggccaatcggccgaattgacaataacttagatttattttctctccactaaacctaaagaaaaatggggttgttcaacatctcattgttactcacttgtctcatggtattagccatatttcactcttgtgaggcccaaaattcaccccaagactatcttgcggttcataacgatgcccgtgcccaagtcggagtcgggcctatgtcttgggatgccaacttggcatcccgagcacaaaactatgccaactcaagagctggtgattgtaacttgattcattctggtgctggggagaatcttgccaagggtggtggtgacttcacggggagggcagccgtgcaattgtgggtgtccgagaggccaagctataactacgctaccaaccaatgtgttggtggaaaaaagtgtagacattatactcaagtagtctggcgcaactcagtccgactaggttgtggtcgggcacgttgcaacaacggatggtggttcatttcttgcaactatgatcctgtaggcaactggatcggacaacgtccttactaaaatgatgtatacttatgacatgttgctagtattaaataaaattctcatatgagacgtcgagaagttaaaatttaagtttgacatatgaatcaagtcaaactcctatctaaaatattaagggattaaatattgaacatctataattattattatttcccttttgatgttgctaatatgaataattccacataccatatgttcataatgggcttaagttgattattaagtactgcatcttcttgtttccaaaaaacattaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaataattaggcaggggggggacttatctaaacacgtaactatttattcataaattcagtttcaaccattcaaaatatttgttctattttaagtgcccatcaaaaaaaaattcaatcattacccaattttttttcaatgactaacaaatactcaagtcttccatattctctcatacaataatggcctaaaactatattttcataaaatattttataggtgaaaattgaatttcatcctttcttgacctattgtcttagatttgaataccagaaataaaaacaaatattgctatttattgaaaaaatttacgtagcatgaaattaaataaattggcacatatttaaaatatctcgtcaggaaaaaaaaattgtacccctaacaaacgtttaaatttaataattttcacaaatgttactaaatttaacaatgagagtttgataaatatctaatggtgaacagaaagtgttcactttcgaaaaacaaagaggaggaaaagtgatctattttgacaaatttaaggatcaaaattgatccaatcatacattagggactattttgaatctactataaaaatgataaggaaccatttttttgttttttcattttctctattaagtttctttgaattttcttcacacatgctaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0157E03.1" temp_strand="-" temp_description="C09HBa0157E03.1  AC234414.1 htgs_phase:1 submitted_to_sgn_as:gnl|gbrgsp|C09HBa0157E03 upload_account_name:spain (1 - 93835)">
        <position start="68223" stop="65235"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67923" g_stop="65535" g_length="2389"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="2396" r_length="2396" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0157E03.1" gen_strand="-" ref_id="SGN-U314797" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>2389</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0157E03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U314797" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67923" e_stop="65535"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATATCAAACTATTTATGCTATATTTAATACTTATTTAAATCGTAACTATTTA-TTCTAAATT-CAGCTCTAACACTTTTTAAAAAGTTTTTAAAATTTTCTTTCGAAGCTACAAGGATTGAGGCAGTTTCTAATTTCCACATAAAGGACCAAAAAATTGTTTTGGTTTAA--GTGTCTATCACTTCCATTGTTTGTTG------TT-T-T-CATTATATCCAAATTGCTTTCAATGACTAACAAATACTTGAGTCTTCTCTCTCTCATAGAATAACTTTCTTCCAATAAATCCACGTAAGGGCGGCTCAATAAGTGTTGTTTAATATTATCTAAATAATAGAGTAAAGTATGATTATTCTTTAAAGCATATAGTATTTCCTTAATCACACGACATGCAATCTCCTTTGAATTTTCTTCACATGTGAAATAAAATTCCACAAAGTTTAAATTTAACAATTTTCACAAATTTGATTAAATTGAACAATCAAAGTTTGATAAATATCTTATCGAAACCAAAAGTGTTCACTTTTGAAAAATATAAAGGACCAAAAAAGATCACTTTTGACAATCTTAAGGACCAAAATTGCTCTTATCATACATAAGGGAGTCTATTGAAACTACTAAAAAGATAAGGAAGCCTTTTTGTCATTTCTCTATAATTTCCTTTGAA-TTTTCTTCATACATGCTAAACAAAATTACACAATGTTTAATTATATATACACTATTTAAAGGACCAAAAGTAATTAATTCTAAAAAGTTTTAAGGACCAAAATCACTTAGCAAAATACACAAGAGACTATTTTGAACTTACTATCAAAGATAAGAGACCATTTTTATCATTTCCTCTACTAATAATTTCCTTTGAATTTTCTTCACACATACTTAGCAAAATTCCACAATTTTTACTTATAAATACACTACTTATCTCACGTTTATAATCACAATAACTTAGATTTATTTTCTCTCCACTAAACCTAAAGAAAAATGGGGTTGTTCAACATCTCATTGTTACTCACTTGTCTCATGGTATTAGCCATATTTCACTCTTGTGAGGCCCAAAATTCACCCCAAGACTATCTTGCGGTTCATAACGATGCCCGTGCCCAAGTCGGAGTCGGGCCTATGTCTTGGGATGCCAACTTGGCATCCCGAGCACAAAACTATGCCAACTCAAGAGCTGGTGATTGTAACTTGATTCATTCTGGTGCTGGGGAGAATCTTGCCAAGGGTGGTGGTGACTTCACGGGGAGGGCAGCCGTGCAATTGTGGGTGTCCGAGAGGCCAAGCTATAACTACGCTACCAACCAATGTGTTGGTGGAAAAAAGTGTAGACATTATACTCAAGTAGTCTGGCGCAACTCAGTCCGACTAGGTTGTGGTCGGGCACGTTGCAACAACGGATGGTGGTTCATTTCTTGCAACTATGATCCTGTAGGCAACTGGATCGGACAACGTCCTTACTAAAATGATGTATACTTATGACATGTTGCTAGTATTAAATAAAATTCTCATATGAGACGTCGAGAAGTTAAAATTTAAGTTTGACATATGAATCAAGTCAAACTCCTATCTAAAATATTAAGGGATTAAATATTGAACATCTATAATTATTATTATTTCCCTTTTGATGTTGCTAATATGAATAATTCCACATACCATATGTTCATAATGGGCTTAAGTTGATTATTAAGTACTGCATCTTCTTGTTTCCATAAAACATTAATATACATAAAATTTTAATTAAGCATGGCATATATTAATTAGGCACATCAAGCACTTATCTAAACACGTAACTATTTATTCATAAATTCAGTTTCAACCATTCAAAATATTTGTTCTATTTTAAGTGCCCATCAAAAAAAAATTCAATCATTACCCAATTTTTTTTCAATGACTAACAAATACTCAAGTCTTCCATATTCTCTCATACAATAATGGCCTAAAACTATATTTTCATAAAATATTTTATAGGTGAAAATTGAATTTCATCCTTTCTTGACCTATTGTCTTAGATTTGAATACCAGAAATAAAAACAAATATTGCTATTTATTGAAAAAATTTACGTAGCATGAAATTAAATAAATTGGCACATATTTAAAATATCTCGTCAGGAAAAAAAAATTGTACCCCTAACAAACGTTTAAATTTAATAATTTTCACAAATGTTACTAAATTTAACAATGAGAGTTTGATAAATATCTAATCGTGAACAGAAAGTGTTCACTTTCGAAAAACAAAGAGGACCAAAAGTGATCTATTTTGACAAATTTAAGGATCAAAATTGATCCAATCATACATTAGGGACTATTTTGAATCTACTATAAAAATGATAAGGAACCATTTTTTTGTTTTTTCATTTTCTCTATTAAGTTTCTTTGAATTTTCTTCACACATGCTAA</genome_strand>
        <mrna_strand>CATATCAAACTATTTATGCTATATTTAATACTTATTTAAATCGTAACTATTTATTTCTAAATTGCAGCTCTAACACTTTTTAAAAAGTTTTTAAAATTTTCTTTCGAAGCTACAAGGATTGAGGCAGTTTCTAATTTCCACATAAAGGACCAAAAAATTGTTTTGGTTTAAGTGTGTCTATCACTTCCATTGTTTGTTGTTTTCATTATATCCATTATATCCAAATTGCTTTCAATGACTAACAAATACTTGAGTCTTCTCTCTCTCATAGAATAACTTTCTTCC-ATAAATCCACGTAA-GGCGGCTCAATAAGTGTTGTTTAATATTATCTAAATAATAGAGTAAAGTATGATTATTCTTTAAAGCATATAGTATTTCCTTAATCACACGACATGCAATCTCCTTTGAATTTTCTTCACATGTG-AATAAAATTCCACAAAGTTTAAATTTAACAATTTTCACAAATTTGATTAAATTGAACAATCAAAGTTTGATAAATATCTTATCGAAACCAAAAGTGTTCACTTTTGAAAAATATAAAGGACCAAAAAAGATCACTTTTGACAATCTTAAGGACCAAAATTGCTCTTATCATACATAAGGGAGTCTATTGAAACTACTAAAAAGATAAGGAAGCCTTTTTGTCATTTCTCTATAATTTCCTTTGAATTTTTCTTCATACATGCTAAACAAAATTACACAATGTTTAATTATATATACACTATTTAAAGGACCAAAAGTAATTAATTCTAAAAAGTTTTAAGGACCAAAATCACTTAGCAAAATACACAAGAGACTATTTTGAACTTACTATCAAAGATAAGAGACCATTTTTATCATTTCCTCTACTAATAATTTCCTTTGAATTTTCTTCACACATACTTAGCAAAATTCCACAATTTTTACTTATAAATTGGCGGCCAATCGGCCG---A-ATTGACAATAACTTAGATTTATTTTCTCTCCACTAAACCTAAAGAAAAATGGGGTTGTTCAACATCTCATTGTTACTCACTTGTCTCATGGTATTAGCCATATTTCACTCTTGTGAGGCCCAAAATTCACCCCAAGACTATCTTGCGGTTCATAACGATGCCCGTGCCCAAGTCGGAGTCGGGCCTATGTCTTGGGATGCCAACTTGGCATCCCGAGCACAAAACTATGCCAACTCAAGAGCTGGTGATTGTAACTTGATTCATTCTGGTGCTGGGGAGAATCTTGCCAAGGGTGGTGGTGACTTCACGGGGAGGGCAGCCGTGCAATTGTGGGTGTCCGAGAGGCCAAGCTATAACTACGCTACCAACCAATGTGTTGGTGGAAAAAAGTGTAGACATTATACTCAAGTAGTCTGGCGCAACTCAGTCCGACTAGGTTGTGGTCGGGCACGTTGCAACAACGGATGGTGGTTCATTTCTTGCAACTATGATCCTGTAGGCAACTGGATCGGACAACGTCCTTACTAAAATGATGTATACTTATGACATGTTGCTAGTATTAAATAAAATTCTCATATGAGACGTCGAGAAGTTAAAATTTAAGTTTGACATATGAATCAAGTCAAACTCCTATCTAAAATATTAAGGGATTAAATATTGAACATCTATAATTATTATTATTTCCCTTTTGATGTTGCTAATATGAATAATTCCACATACCATATGTTCATAATGGGCTTAAGTTGATTATTAAGTACTGCATCTTCTTGTTTCCAAAAAACATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAATTAGGCAGGGGGGGGACTTATCTAAACACGTAACTATTTATTCATAAATTCAGTTTCAACCATTCAAAATATTTGTTCTATTTTAAGTGCCCATCAAAAAAAAATTCAATCATTACCCAATTTTTTTTCAATGACTAACAAATACTCAAGTCTTCCATATTCTCTCATACAATAATGGCCTAAAACTATATTTTCATAAAATATTTTATAGGTGAAAATTGAATTTCATCCTTTCTTGACCTATTGTCTTAGATTTGAATACCAGAAATAAAAACAAATATTGCTATTTATTGAAAAAATTTACGTAGCATGAAATTAAATAAATTGGCACATATTTAAAATATCTCGTCAGGAAAAAAAAATTGTACCCCTAACAAACGTTTAAATTTAATAATTTTCACAAATGTTACTAAATTTAACAATGAGAGTTTGATAAATATCTAATGGTGAACAGAAAGTGTTCACTTTCGAAAAACAAAGAGGAGGAAAAGTGATCTATTTTGACAAATTTAAGGATCAAAATTGATCCAATCATACATTAGGGACTATTTTGAATCTACTATAAAAATGATAAGGAACCATTTTTTTGTTTTTTCATTTTCTCTATTAAGTTTCTTTGAATTTTCTTCACACATGCTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U340682" ref_strand="+" ref_description="SGN-U340682        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>aatttttattttttgttatccattccctgtttgatccctctgatgaaggaacaaactctgtcaccatcaatctttaatgggttttcacagctaagcttgtagttgaaatttgatacaataatatttatgtttaaggtccaccaagaaaccaggttcaaggtatgcaaagaacacccactgtcaccatattctctgaactccaaataaaaactattgttttcttgtttttggggacaaaagtttatcccatacccttttggttttttttacttccatttgcaggtttgttacatattaatggtgtcttggtcttgttatgcttgtggggttgtgggttttgaatataagcaaaaaaaaaactggatttgaggttggggttaggggttctgatgaatgtattgtttgctggttcttttggataaattatgtaaaaagattcaaactttatcaagattctcggataaatatatgtttatgtgatatatatatatagatata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0157E03.1" temp_strand="+" temp_description="C09HBa0157E03.1  AC234414.1 htgs_phase:1 submitted_to_sgn_as:gnl|gbrgsp|C09HBa0157E03 upload_account_name:spain (1 - 93835)">
        <position start="71771" stop="72869"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72071" g_stop="72569" g_length="499"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="498" r_length="498" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0157E03.1" gen_strand="+" ref_id="SGN-U340682" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>499</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0157E03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U340682" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72071" e_stop="72569"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTTTATTTTTTGTTATCCATTCCCTGTTTGATCCCTCTGATGAAGGAACAAACTCTGTCACCATCAATCTTTAATGGGTTTTCACAGCTAAGCTTGTAGTTGAAATTTGATACAATAATATTTATGTTTAAGGTCCACCAAGAAACCAGGTTCAAGGTATGCAAAGAACACCCACTGTCACCATATTCTCTGAACTCCAAATAAAAACTATTGTTTTCTTGTTTTTGGGGACAAAAGTTTAGCCCATACCCTTTTGGTTTTTTTTACTTCCATTTGCAGGTTTGTTACATATTAATGGTGTCTTGGTCTTGTTATGCTTGTGGGGTTGTGGGTTTTGAATATAAGCAAAAAAAAAAACTGGATTTGAGGTTGGGGTTAGGGGTTTTGATGAATGTATTGTTTGCTGGTTCTTTTGGATAAATTATGTAAAAAGATTCAAACTTTATCAAGATTCTTGGATAAATATATGTTTATGTGATATATATATATAGATATA</genome_strand>
        <mrna_strand>AATTTTTATTTTTTGTTATCCATTCCCTGTTTGATCCCTCTGATGAAGGAACAAACTCTGTCACCATCAATCTTTAATGGGTTTTCACAGCTAAGCTTGTAGTTGAAATTTGATACAATAATATTTATGTTTAAGGTCCACCAAGAAACCAGGTTCAAGGTATGCAAAGAACACCCACTGTCACCATATTCTCTGAACTCCAAATAAAAACTATTGTTTTCTTGTTTTTGGGGACAAAAGTTTATCCCATACCCTTTTGGTTTTTTTTACTTCCATTTGCAGGTTTGTTACATATTAATGGTGTCTTGGTCTTGTTATGCTTGTGGGGTTGTGGGTTTTGAATATAAGC-AAAAAAAAAACTGGATTTGAGGTTGGGGTTAGGGGTTCTGATGAATGTATTGTTTGCTGGTTCTTTTGGATAAATTATGTAAAAAGATTCAAACTTTATCAAGATTCTCGGATAAATATATGTTTATGTGATATATATATATAGATATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U322464" ref_strand="+" ref_description="SGN-U322464        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: AT3G12620.2 | Symbol: None | similar to serine/threonine protein phosphatase 2C (PP2C6) [Arabidopsis thaliana] (TAIR:At3g55050.1); similar to serine/threonine protein phosphatase 2C (PP2C6) [Arabidopsis thaliana] (TAIR:At3g55050.2); similar to protein phosphatase 2C (PP2C) [Fagus sylvatica] (GB:CAB90634.1); contains InterPro domain Protein phosphatase 2C-like (InterPro:IPR001932) | chr3:4009282-4011354 REVERSE | Aliases: None (evalue: 2e-82, score=301) genbank/nr: gi|12321955|gb|AAG51012.1| protein phosphatase 2C, putative; 16828-18284 [Arabidopsis thaliana](evalue: 2e-80, score=301)">
      <seq>gatttgggggttcatgtaaatggtgaattttcaatggcaataatacaagctaataatttaatggaggatcagagccagcttgaatcagggccattgagttgtcttgaatcaggtccttatggaacatttgttggagtttatgatggacatggaggaccggagacgtcctgtttcgtaaacaagactttgttctccaatcttaagaaatttgcaacggagcatcaagaaatgtctgcagatgtcataaaaaaagctttcttgaaaacggatgaggagttcttgtcacttgtgaagcaacaatggtttgagaagccacaacttgcatctgtgggatcttgttgtttggcaggcgtaatctgcaatggactactatatgttgccaatgccggagattcacgtgtggtgttaggtagagcagagaaagctgcaaggggtgtgactgctattcaattgtcaatggagcacaatgctaataatgagtctgtgagagatgagcttagatcattgcatccccaggattcacagattgtgcttctcaaacacaaagtttggcgcgtgaagggtatcatacaggtttcgaggtcaattggtgatgcctatctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0157E03.1" temp_strand="+" temp_description="C09HBa0157E03.1  AC234414.1 htgs_phase:1 submitted_to_sgn_as:gnl|gbrgsp|C09HBa0157E03 upload_account_name:spain (1 - 93835)">
        <position start="72399" stop="74872"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72699" g_stop="72903" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="205" r_length="205" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72904" i_stop="73833" i_length="930">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="73834" g_stop="74201" g_length="368"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="573" r_length="368" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="74202" i_stop="74542" i_length="341">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="74543" g_stop="74572" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="574" r_stop="603" r_length="30" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0157E03.1" gen_strand="+" ref_id="SGN-U322464" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>603</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0157E03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U322464" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72699" e_stop="72903"/>
          <exon e_start="73834" e_stop="74201"/>
          <exon e_start="74543" e_stop="74572"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTTGGGGGTTCATGTAAATGGTGAATTTTCAATGGCAATAATACAAGCTAATAATTTAATGGAGGATCAGAGCCAGCTTGAATCAGGGCCATTGAGTTGTCTTGAATCAGGTCCTTATGGAACATTTGTTGGAGTTTATGATGGACATGGAGGACCGGAGACGTCCTGTTTCGTAAACAAGACTTTGTTCTCCAATCTTAAGAGTAAGCTCATCATGTTCCTTTTTGATTGCATTTGATTATTAATATGATTCTTGATATCGTGGTGATGTCGTAGTTTTGAAAGTGTTGATTTTTTTCAAGATGTGAATGTTAATGCTGGTTAAGTTTTGATGTAAATACTAAAAATGATTCAGGTTGGTAGATCTGATCTTTGGAATTTACATATTGTGCTATGTGTAATTGTTGTTGCAAGTCCAGTGTTTCATTGATAATGAATCAAGAATGTTACAAAAGCGGTATATCAATGTACATTAAGATCCCAAAAATTCTGGCCAACGTTCGATACAGATAAGTACATCCATCTAGCTATGGCCCCTGCTGTCTAAAATGATGCCTTCCACAATATTTGATGTGTCTACAACTAAGATATTGCTGGATTTTGCCTTGTGATTCTACTTTATAGACACAACTTTCAGGGTACTTTGTCAAACTTATAGTGTTTATACACGATATTGCTTTACTACCACCTTGAATTACACGAAAGATCTTACAATCTTGTTGTCTATTTTACATGTTCGTTAAAACTTTTAAGATATAAAGATCTGGTTTTGTCACTTCTATGAGTTATGTAAACACAACTTTCATCAGATTTAAACGTATTTTCCTCTTTTATTAGAAATATTAGAACGACTTAAGATTTTGATACGTGCAATAACAATCCAGTAGAGACACACTCGAGGAAGATGCTATCTATAGATATCATATGCTTTTTGCAGTATCGTGATCTGAATTCCTAACACTGTTGTGCTTTCAACCTTACTACTATGTGTGTTATTCACCCTGAAACTGTCTAATTATCCTCCAAAAATGTTTATAATTATTCCTTGGAACTTATATTCATCTGTTTTATATTCTAGAAAGTTTATGAGTAGTATAAACGATATCTATTTACCTTCATCCCTTCATAAACAGAATTTGCAACGGAGCATCAAGAAATGTCTGCAGATGTCATAAAAAAAGCTTTCTTGAAAACGGATGAGGAGTTCTTGTCACTTGTGAAGCAACAATGGTTTGAGAAGCCACAACTTGCATCTGTGGGATCTTGTTGTTTGGCAGGCGTAATCTGCAATGGACTACTATATGTTGCCAATGCCGGAGATTCACGTGTGGTGTTAGGTAGAGCAGAGAAAGCTGCAAGGGGTGTGACTGCTATTCAATTGTCAATGGAGCACAATGCTAATAATGAGTCTGTGAGAGATGAGCTTAGATCATTGCATCCCCAGGATTCACAGATTGTGCTTCTCAAACACAAAGTTTGGCGCGTGAAGGGTATCATACAGGTGATTTATCTGTTTCTATCACATTCTTAGGCCGTCTCATGTTGATTTTTCAAAAATATGCCTCATATAAGTTACTGCTATAATATAAATCTATGGTTAGGAGTTGATATTGCAAGTAAGCAAACCTAAAAGTTAGTTATGTTGTCCTTTGAGATCGACTCTTTATTATGTAATATAAGTCGCTTTGATGCCTGAATTTTTTTTGAGATTTGAGGCTGTAAAGATTAGACTAATTGTGGTTGCATTATGCATCTTGGTTTGGAAGAAATCGCCGCTACTGCAGGTGTCAAGGAAGTGTGTGTGACATACGAGTTGATGTTCGTTTGTTATCCTCTCTATAGGTTTCGAGGTCAATTGGTGATGCCTATCTT</genome_strand>
        <mrna_strand>GATTTGGGGGTTCATGTAAATGGTGAATTTTCAATGGCAATAATACAAGCTAATAATTTAATGGAGGATCAGAGCCAGCTTGAATCAGGGCCATTGAGTTGTCTTGAATCAGGTCCTTATGGAACATTTGTTGGAGTTTATGATGGACATGGAGGACCGGAGACGTCCTGTTTCGTAAACAAGACTTTGTTCTCCAATCTTAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTGCAACGGAGCATCAAGAAATGTCTGCAGATGTCATAAAAAAAGCTTTCTTGAAAACGGATGAGGAGTTCTTGTCACTTGTGAAGCAACAATGGTTTGAGAAGCCACAACTTGCATCTGTGGGATCTTGTTGTTTGGCAGGCGTAATCTGCAATGGACTACTATATGTTGCCAATGCCGGAGATTCACGTGTGGTGTTAGGTAGAGCAGAGAAAGCTGCAAGGGGTGTGACTGCTATTCAATTGTCAATGGAGCACAATGCTAATAATGAGTCTGTGAGAGATGAGCTTAGATCATTGCATCCCCAGGATTCACAGATTGTGCTTCTCAAACACAAAGTTTGGCGCGTGAAGGGTATCATACAG.....................................................................................................................................................................................................................................................................................................................................................GTTTCGAGGTCAATTGGTGATGCCTATCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U322463" ref_strand="+" ref_description="SGN-U322463        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: AT3G12620.2 | Symbol: None | similar to serine/threonine protein phosphatase 2C (PP2C6) [Arabidopsis thaliana] (TAIR:At3g55050.1); similar to serine/threonine protein phosphatase 2C (PP2C6) [Arabidopsis thaliana] (TAIR:At3g55050.2); similar to protein phosphatase 2C (PP2C) [Fagus sylvatica] (GB:CAB90634.1); contains InterPro domain Protein phosphatase 2C-like (InterPro:IPR001932) | chr3:4009282-4011354 REVERSE | Aliases: None (evalue: 2e-26, score=115) genbank/nr: gi|12321955|gb|AAG51012.1| protein phosphatase 2C, putative; 16828-18284 [Arabidopsis thaliana](evalue: 2e-24, score=115)">
      <seq>ttgaattacacgaaagatcttacaatcttgttgtctattttacatgttcgttaaaacttttaagatataaagatctggttttgtcacttctatgagttatgtaaacacaactttcatcagatttaaacgtattttcctcttttattagaaatattagaacgacttaagattttgatacgtgcaataacaatccagtagagacacactcgaggaagatgctatctatagatatcatatgctttttgcagtatcgtgatctgaattcctaacactgttgtgctttcaaccttactactatgtgtgttattcaccctgaaactgtctaattatcctccaaaaatgtttataattattccttggaacttatattcatctgttttatattctagaaagtttatgagtagtataaacgatatctatttaccttcatcccttcataaacagaatttgcaacggagcatcaagaaatgtctgcagatgtcataaaaaaagctttcttgaaaacggatgaggagttcttgtcacttgtgaagcaacaatggtttgagaagccacaacttgcatctgtgggatcttgttgtttggcaggcgtaatctgcaatggactactatatgttgccaatgccggagattcacgtgtggtgttaggtagagcagagaaagctggcaggggtgtgactgctattcaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0157E03.1" temp_strand="+" temp_description="C09HBa0157E03.1  AC234414.1 htgs_phase:1 submitted_to_sgn_as:gnl|gbrgsp|C09HBa0157E03 upload_account_name:spain (1 - 93835)">
        <position start="73090" stop="74380"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73390" g_stop="74080" g_length="691"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="691" r_length="691" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0157E03.1" gen_strand="+" ref_id="SGN-U322463" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>691</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0157E03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U322463" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73390" e_stop="74080"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAATTACACGAAAGATCTTACAATCTTGTTGTCTATTTTACATGTTCGTTAAAACTTTTAAGATATAAAGATCTGGTTTTGTCACTTCTATGAGTTATGTAAACACAACTTTCATCAGATTTAAACGTATTTTCCTCTTTTATTAGAAATATTAGAACGACTTAAGATTTTGATACGTGCAATAACAATCCAGTAGAGACACACTCGAGGAAGATGCTATCTATAGATATCATATGCTTTTTGCAGTATCGTGATCTGAATTCCTAACACTGTTGTGCTTTCAACCTTACTACTATGTGTGTTATTCACCCTGAAACTGTCTAATTATCCTCCAAAAATGTTTATAATTATTCCTTGGAACTTATATTCATCTGTTTTATATTCTAGAAAGTTTATGAGTAGTATAAACGATATCTATTTACCTTCATCCCTTCATAAACAGAATTTGCAACGGAGCATCAAGAAATGTCTGCAGATGTCATAAAAAAAGCTTTCTTGAAAACGGATGAGGAGTTCTTGTCACTTGTGAAGCAACAATGGTTTGAGAAGCCACAACTTGCATCTGTGGGATCTTGTTGTTTGGCAGGCGTAATCTGCAATGGACTACTATATGTTGCCAATGCCGGAGATTCACGTGTGGTGTTAGGTAGAGCAGAGAAAGCTGCAAGGGGTGTGACTGCTATTCAATT</genome_strand>
        <mrna_strand>TTGAATTACACGAAAGATCTTACAATCTTGTTGTCTATTTTACATGTTCGTTAAAACTTTTAAGATATAAAGATCTGGTTTTGTCACTTCTATGAGTTATGTAAACACAACTTTCATCAGATTTAAACGTATTTTCCTCTTTTATTAGAAATATTAGAACGACTTAAGATTTTGATACGTGCAATAACAATCCAGTAGAGACACACTCGAGGAAGATGCTATCTATAGATATCATATGCTTTTTGCAGTATCGTGATCTGAATTCCTAACACTGTTGTGCTTTCAACCTTACTACTATGTGTGTTATTCACCCTGAAACTGTCTAATTATCCTCCAAAAATGTTTATAATTATTCCTTGGAACTTATATTCATCTGTTTTATATTCTAGAAAGTTTATGAGTAGTATAAACGATATCTATTTACCTTCATCCCTTCATAAACAGAATTTGCAACGGAGCATCAAGAAATGTCTGCAGATGTCATAAAAAAAGCTTTCTTGAAAACGGATGAGGAGTTCTTGTCACTTGTGAAGCAACAATGGTTTGAGAAGCCACAACTTGCATCTGTGGGATCTTGTTGTTTGGCAGGCGTAATCTGCAATGGACTACTATATGTTGCCAATGCCGGAGATTCACGTGTGGTGTTAGGTAGAGCAGAGAAAGCTGGCAGGGGTGTGACTGCTATTCAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U321775" ref_strand="+" ref_description="SGN-U321775        Tomato 200607 #1 [9 ESTs aligned] arabidopsis/peptide: AT3G12620.2 | Symbol: None | similar to serine/threonine protein phosphatase 2C (PP2C6) [Arabidopsis thaliana] (TAIR:At3g55050.1); similar to serine/threonine protein phosphatase 2C (PP2C6) [Arabidopsis thaliana] (TAIR:At3g55050.2); similar to protein phosphatase 2C (PP2C) [Fagus sylvatica] (GB:CAB90634.1); contains InterPro domain Protein phosphatase 2C-like (InterPro:IPR001932) | chr3:4009282-4011354 REVERSE | Aliases: None (evalue: 5e-26, score=114) genbank/nr: gi|12321955|gb|AAG51012.1| protein phosphatase 2C, putative; 16828-18284 [Arabidopsis thaliana](evalue: 3e-24, score=114)">
      <seq>tgttgatatagtccacagtccaacctcgaaacggtattgcccagagattaatcaaagctgctctccgagtagcagctaagaaaagagagatgaggtattcagacctgaaaaagatcgaacgaggtgtaaggaggcatttccacgatgatatctcggttgttgttgtgtttctggattgttattccatgaatcgaagctcctctcacgttccgatactttccattagaggaggcggtatgcctgcttctcccaaacgatagatcccaagactttaaacagagaagaaagagagctcgtcttttggaggcctcgaatctctttgcttcttttctccagtttctttagggttgtaatctactttttatgtgttcttatatttcctcgattatcaattcatcattccttgctgaacaaaaaaaaaaaaaaaaagtctcgtgttaccaggcaacgtataaagatgtacacgagatactttgtgagaacagcaaaagaaatggaacaaccattagaaggaagaagaatacctacctaagttatgttttgcaggttacaaatttgtaaattctaaaaactgttgtggaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0157E03.1" temp_strand="+" temp_description="C09HBa0157E03.1  AC234414.1 htgs_phase:1 submitted_to_sgn_as:gnl|gbrgsp|C09HBa0157E03 upload_account_name:spain (1 - 93835)">
        <position start="74449" stop="75922"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74749" g_stop="74779" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="32" r_length="32" r_score="0.935"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74780" i_stop="75061" i_length="282">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75062" g_stop="75615" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="585" r_length="553" r_score="0.973"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75616" i_stop="75807" i_length="192">
            <donor d_prob="0.566" d_score="0.90"/>
            <acceptor a_prob="0.330" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75808" g_stop="75822" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="586" r_stop="600" r_length="15" r_score="0.800"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0157E03.1" gen_strand="+" ref_id="SGN-U321775" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>600</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0157E03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U321775" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74749" e_stop="74779"/>
          <exon e_start="75062" e_stop="75615"/>
          <exon e_start="75808" e_stop="75822"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTGATATAGTCCACAGT-CAACCTCGAAACGTAAGCATTCAATCTCTGATAATATGAATCGTCTTTTATATAACTATGTACGAAGGGTCTATCGGAAACAACCCCTCTACCTCTAATGGTAGGGGTAAGGTCTGTGTACATTTTACCCTCCCAAGATCCCACTTTGTTGAGACTACACTAAGTATGTTAACTATCTAAAGAATCTTGAGTCGAGGGTCTATTGGATACAGCCTCTCCACCTCTGACTTAGGATAAGGTAATTCTTCGATGAAGTTTTAGTAAATCTTGTGCTTTTTTCTCTCTTGTGACCAGGGTATTGCCCAGAGATTAATCAAAGCTGCTCTCCGAGTAGCAGCTAAGAAAAGAGAGATGAGGTATTCAGACCTGAAAAAGATCGAACGAGGTGTAAGGAGGCATTTCCACGATGATATCTCGGTTGTTGTTGTGTTTCTGGATTGTTATTCCATGAATCGAAGCTCCTCTCACGTTCCGATACTTTCCATTAGAGGAGGCGGTATGCCTGCTTCTCCCAAACGATAGATCCCAAGACTTTAAACAGAGAAGAAAGAGAGCTCGTCTTTTGGAGGCCTCGAATCTCTTTGCTTCTTTTCTCCAGTTTCTTTAGGGTTGTAATCTACTTTTTATGTGTTCTTATATTTCCTCGATTATCAATTCATCATTCCTTGCTGAACAACGTAACGTGCACAACAGTCTCGTGTTACCAGGCAACGTATAAAGATGTACACGAGATACTTTGTGAGAACAGCAAAAGAAATGGAACAACCATTAGAAGGAAGAAGAATACCTACCTAAGTTATGTTCTGCAGGTTACAAATTTGTAAATACTAAAAACTGTTGTGTGACAAGTACGAACTTGACTCAAATTTCGCAGTCCTCTTATCATATCGTGAATAATTTCGTTCAGGGTTTCAAATTCAACGATTGAAATTAAAACACAAACTGTACAGACAAGTTCTCTATAATAATTTGTAAAATAAATGTAGACAATGTACACACTATTTTTGTCCAAAATATGTTTTCCAATACTTCACTTTTAGAAAACAAACAAAAAC</genome_strand>
        <mrna_strand>TGTTGATATAGTCCACAGTCCAACCTCGAAAC..........................................................................................................................................................................................................................................................................................GGTATTGCCCAGAGATTAATCAAAGCTGCTCTCCGAGTAGCAGCTAAGAAAAGAGAGATGAGGTATTCAGACCTGAAAAAGATCGAACGAGGTGTAAGGAGGCATTTCCACGATGATATCTCGGTTGTTGTTGTGTTTCTGGATTGTTATTCCATGAATCGAAGCTCCTCTCACGTTCCGATACTTTCCATTAGAGGAGGCGGTATGCCTGCTTCTCCCAAACGATAGATCCCAAGACTTTAAACAGAGAAGAAAGAGAGCTCGTCTTTTGGAGGCCTCGAATCTCTTTGCTTCTTTTCTCCAGTTTCTTTAGGGTTGTAATCTACTTTTTATGTGTTCTTATATTTCCTCGATTATCAATTCATCATTCCTTGCTGAACAA-AAAAAAAAAAAAAAAGTCTCGTGTTACCAGGCAACGTATAAAGATGTACACGAGATACTTTGTGAGAACAGCAAAAGAAATGGAACAACCATTAGAAGGAAGAAGAATACCTACCTAAGTTATGTTTTGCAGGTTACAAATTTGTAAATTCTAAAAACTGTTGTGGAAAAA................................................................................................................................................................................................AAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U343283" ref_strand="+" ref_description="SGN-U343283        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>ttaacattagcaagttccctagtagcaggtccatccttcaaaatggggaaaatggcttttgtcgtctcttaggttagccagtagtgctgggatacatggaccacaacctccttagtgtgttattctgtcagaagtgacgacccataaccaatatttgaaatcaacttcttttaaaaaaacttatctgaaacgattaaactacaacctcaatatttcctacttgaaacctttgtttttgacaacttcatcatcgggctttcctttatcaatctgcaactgttctttctcattcttgtggttnttcatttcacctaaatgagaaaatggtgcatatcaaggatctactggtgatagcatttctgatttctccaagtgctcaatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0157E03.1" temp_strand="-" temp_description="C09HBa0157E03.1  AC234414.1 htgs_phase:1 submitted_to_sgn_as:gnl|gbrgsp|C09HBa0157E03 upload_account_name:spain (1 - 93835)">
        <position start="77206" stop="76224"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76906" g_stop="76524" g_length="383"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="383" r_length="383" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0157E03.1" gen_strand="-" ref_id="SGN-U343283" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>383</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0157E03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U343283" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76906" e_stop="76524"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAACATTAGCAAGTTCCCTAGTAGCAGGTCCATCCTTCAAAATGGGGAAAATGGCTTTTGTCGTCTCTTAGGTTAGCCAGTAGTGCTGGGATACATGGACCACAACCTCCTTAGTGTGTTATTCTGTCAGAAGTGACGACCCATAACCAATATTTGAAATCAACTTCTTTTAAAAAAACTTATCTGAAACGATTAAACTACAACCTCAATATTTCCTACTTGAAACCTTTGTTTTTGACAACTTCATCATCGGGCTTTCCTTTATCAATCTGCAACTGTTCTTTCTCATTCTTGTGGTTTTTCATTTCACCTAAATGAGAAAATGGTGCATATCAAGGATCTACTGGTGATAGCATTTCTGATTTCTCCAAGTGCTCAATGT</genome_strand>
        <mrna_strand>TTAACATTAGCAAGTTCCCTAGTAGCAGGTCCATCCTTCAAAATGGGGAAAATGGCTTTTGTCGTCTCTTAGGTTAGCCAGTAGTGCTGGGATACATGGACCACAACCTCCTTAGTGTGTTATTCTGTCAGAAGTGACGACCCATAACCAATATTTGAAATCAACTTCTTTTAAAAAAACTTATCTGAAACGATTAAACTACAACCTCAATATTTCCTACTTGAAACCTTTGTTTTTGACAACTTCATCATCGGGCTTTCCTTTATCAATCTGCAACTGTTCTTTCTCATTCTTGTGGTTNTTCATTTCACCTAAATGAGAAAATGGTGCATATCAAGGATCTACTGGTGATAGCATTTCTGATTTCTCCAAGTGCTCAATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U320724" ref_strand="+" ref_description="SGN-U320724        Tomato 200607 #1 [10 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr5:627117-629253 REVERSE | Aliases: F9G14.80, F9G14_80(evalue: 1e-24, score=110) genbank/nr: gi|50948977|ref|XP_493846.1| unknown protein [Oryza sativa (japonica cultivar-group)] >gi|24796814|gb|AAN64490.1| unknown protein [Oryza sativa (japonica cultivar-group)] (evalue: 2e-23, score=112)">
      <seq>gcacgagcttctacggaattctttatcatgactacgacggcggcgcagcttcctgaaaaccctatcaaaaccctagttcagtcaccggatccaaatccgaccgccgtttctgaagctccggctcatgattccgcaactgactcattgaaatcgccaacgtctgatggagttaaggaccaagcgaagttggataaggcggcggatggaggcggcggcggcggcggtggtaaggatactgatatacagaaaaagatgaagcgagcagagaggtttggaatgacggttcagctttcggaagaggagaagcgaaacactcgagctgagaggtttggcacgtctgcacctcagggttcagatgcttcaaagaaagctgaagagcagaagaggaaagctagggctgagaggtttgggcttagccaatctgatagtactgatgaggatgctaagaagaaagctaggctggcaaggttcgcacctcctgcgaaggctgatcctgtggaggaagataaaaggaaagctagggccctcaggttttcacagtccaagtctggttcccaatcacaagagaacggcaaagaaaaaactgagcaggagactgttgcggtggagaaggctggaggaggaacatgaaccattctcaaacttcgttcaacagcaagagttacttaagatgtatagtttattgttgctgcggaatggttaggagttctgttaagagtgactttaaattcccaaagtttttgttttagtcgtttttggagttccttgtttagtttggtaggttagaagtcttaacatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0157E03.1" temp_strand="-" temp_description="C09HBa0157E03.1  AC234414.1 htgs_phase:1 submitted_to_sgn_as:gnl|gbrgsp|C09HBa0157E03 upload_account_name:spain (1 - 93835)">
        <position start="79424" stop="76599"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79131" g_stop="78806" g_length="326"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="326" r_length="326" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="78805" i_stop="77724" i_length="1082">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77723" g_stop="77646" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="327" r_stop="404" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="77645" i_stop="77564" i_length="82">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="77563" g_stop="77438" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="405" r_stop="530" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="77437" i_stop="77334" i_length="104">
            <donor d_prob="0.904" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="77333" g_stop="77273" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="531" r_stop="591" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="77272" i_stop="77107" i_length="166">
            <donor d_prob="0.922" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="77106" g_stop="76899" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="592" r_stop="799" r_length="208" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0157E03.1" gen_strand="-" ref_id="SGN-U320724" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>799</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0157E03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U320724" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79131" e_stop="78806"/>
          <exon e_start="77723" e_stop="77646"/>
          <exon e_start="77563" e_stop="77438"/>
          <exon e_start="77333" e_stop="77273"/>
          <exon e_start="77106" e_stop="76899"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGTTTCTTCTACGGAATTCTTTATCATGACTACGACGGCGGCGCAGCTTCCTGAAAACCCTATCAAAACCCTAGTTCAGTCACCGGATCCAAATCCGACCGCCGTTTCTGAAGCTCCGGCTCATGATTCCGCAACTGACTCATTGAAATCGCCAACGTCTGATGGAGTTAAGGACCAAGCGAAGTTGGATAAGGCGGCGGATGGAGGCGGCGGCGGCGGCGGTGGTAAGGATACTGATATACAGAAAAAGATGAAGCGAGCAGAGAGGTTTGGAATGACGGTTCAGCTTTCGGAAGAGGAGAAGCGAAACACTCGAGCTGAGAGGTACTTTTTGTAGTTAAATTTTGTTGCTGGATTTGGTATGTGTGTTTAAAACGAATAGTATTACTTCAGAAAAGAGAAACTCTTTACCTTTGTCGGAATCTGGAGCAAATATAGATGATTCGTTTTAGTTTGAGTAGGAGGTTGCAGGTATACTGTGTAATTAGTCTAAGGTGCGTGCAAGCTGGTTCGGGCAGACCACTGGCATGAACATAGTGTGTTGAGTTTGTGTAGCTGATTCATGCTTGTTTGGGATTGAGGCATAGTTGATTGGTTGCTCAAGGTTGAATTCGAGTCTGAGAGGGCACATTAGCTGAACTCTTTGTTTAGGTTCCTAGACATCTGAGGGGTAGTTGACTGGGTTGGTAAGGTTTAGTGCTTTGTTCTGGTTGTGTACTTGTGTTCACTTCGACAATTTGTTAGGCAAAGTAGCTGAACACTATGTTTAGGTTCCTAGACGGTGGTGTTGCACATATCCTTTGCTTTACATTTACAACCATAGAAACAATTATTTAAAGCTATCATCTTTTAAAGTGCTGGTGGATTTTGTGTGTGTCATAATAAAGAAGTAGCAGTCCTGATTTTAAATGAAATACAAGAGATTAACTACTTAATCGTTCCATAAAGGGGTCACACCGTCACACTCCAAACAGCACCAGAACTTGTACTGGGAAGGTAGTTCCAATTGCCCTTTGTTTTTCTTGTCTAGTGAGGTATATTAAGCTGAAATGGATGCGTGTCACCCGAGCAGAATGGACTAAAGCATCTAAACGTGCATTCCCTTCATTTGTTAGTAGAGGCTTGAAAGTTGAGAGGCTGAGAGGCTTAATAATATCTTTTGGATTTATGGTTCCTTTATATAGAATATTGTTGGAATTCAAAAAAATTCCAGCATGGGAATCCTTAGACTTTTCATCTTTCTTTCCAGCTTCCATACAGTTGATCTTCAAGCCTTTATAGTCCAGCAAACATATCTTGTGTTTGTTGTGAAATGGGATACCCAATAGCCGGCCGCAAACATTTAACTCATATGAGGATCTATCTTAAGTTGTTCTTACCCCCTTTGTTGGACTGTTTTGTGTCAGGTTTGGCACGTCTGCACCTCAGGGTTCAGATGCTTCAAAGAAAGCTGAAGAGCAGAAGAGGAAAGCTAGGGCTGAGAGGTATGTGTACTATCTATTTGGGCTACTGCCAGCTGGGTAGTTTACTTGTTTATGTGTTTGTTGATAGATTTGGTTCTGTCAGGTTTGGGCTTAGCCAATCTGATAGTACTGATGAGGATGCTAAGAAGAAAGCTAGGCTGGCAAGGTTCGCACCTCCTGCGAAGGCTGATCCTGTGGAGGAAGATAAAAGGAAAGCTAGGGCCCTCAGGTTACAATGAGACCTTTTCACCTTTTTCTTTATGTCAGCTGAGGGTCTAAAATATTTCGGCGTCGAATTGGTATATGACTTTGGCTGATGGTGTTATTCGACAGGTTTTCACAGTCCAAGTCTGGTTCCCAATCACAAGAGAACGGCAAAGAAAAAACTGAGCAGGTTTCATTTCTAAGTGAAATTTGTGATTTGGAATGAATTTGAAAAACGTAGCAGTCAGTATGTGTTTGCTTTGAATTTTGATGTGATCATACGTGCACTATCCGTGTGTTGAGCGTACTTTTACTAGTACAACTTTCTATTAACTATTGCATGTACTTTAACACAGGAGACTGTTGCGGTGGAGAAGGCTGGAGGAGGAACATGAACCATTCTCAAACTTCGTTCAACAGCAAGAGTTACTTAAGATGTATAGTTTATTGTTGCTGCGGAATGGTTAGGAGTTCTGTTAAGAGTGACTTTAAATTCCCAAAGTTTTTGTTTTAGTCGTTTTTGGAGTTCCTTGTTTAGTTTGGTAGGTTAGAAGTCTTAACATT</genome_strand>
        <mrna_strand>GCACGAGCTTCTACGGAATTCTTTATCATGACTACGACGGCGGCGCAGCTTCCTGAAAACCCTATCAAAACCCTAGTTCAGTCACCGGATCCAAATCCGACCGCCGTTTCTGAAGCTCCGGCTCATGATTCCGCAACTGACTCATTGAAATCGCCAACGTCTGATGGAGTTAAGGACCAAGCGAAGTTGGATAAGGCGGCGGATGGAGGCGGCGGCGGCGGCGGTGGTAAGGATACTGATATACAGAAAAAGATGAAGCGAGCAGAGAGGTTTGGAATGACGGTTCAGCTTTCGGAAGAGGAGAAGCGAAACACTCGAGCTGAGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGCACGTCTGCACCTCAGGGTTCAGATGCTTCAAAGAAAGCTGAAGAGCAGAAGAGGAAAGCTAGGGCTGAGAG..................................................................................GTTTGGGCTTAGCCAATCTGATAGTACTGATGAGGATGCTAAGAAGAAAGCTAGGCTGGCAAGGTTCGCACCTCCTGCGAAGGCTGATCCTGTGGAGGAAGATAAAAGGAAAGCTAGGGCCCTCAG........................................................................................................GTTTTCACAGTCCAAGTCTGGTTCCCAATCACAAGAGAACGGCAAAGAAAAAACTGAGCAG......................................................................................................................................................................GAGACTGTTGCGGTGGAGAAGGCTGGAGGAGGAACATGAACCATTCTCAAACTTCGTTCAACAGCAAGAGTTACTTAAGATGTATAGTTTATTGTTGCTGCGGAATGGTTAGGAGTTCTGTTAAGAGTGACTTTAAATTCCCAAAGTTTTTGTTTTAGTCGTTTTTGGAGTTCCTTGTTTAGTTTGGTAGGTTAGAAGTCTTAACATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U343666" ref_strand="+" ref_description="SGN-U343666        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT2G27090.1 | Symbol: None | expressed protein, contains Pfam domains, PF04782: Protein of unknown function (DUF632) and PF04783: Protein of unknown function (DUF630) | chr2:11573366-11578890 REVERSE | Aliases: T20P8.14, T20P8_14 (evalue: 1e-43, score=173) genbank/nr: gi|46518491|gb|AAS99727.1| At2g27090 [Arabidopsis thaliana] >gi|3885339|gb|AAC77867.1| hypothetical protein [Arabidopsis thaliana] >gi|15225846|ref|NP_180277.1| expressed protein [Arabidopsis thaliana] (evalue: 9e-42, score=173)">
      <seq>tagaggaagataaagccttgcagctttgtcgtgaacggaagaagtttgtaaggcaagctcttgatggacggtgtaatctagccgcgactcatatagcttatattgagtctctgaaaattacaggaactgttttaaggagatttgctgaacctgaggctccaattggatcttcaatctacacttcaacgagtgcaacccctgagctacgtggattaactgaaaagtctctttcccatttttcattctcttctcgatccatctcacgtcatgtagatgcaactgagaatatcctaccgtctccttcatctccaacctcaagtcgataccatgctaatcacatgaaatttagaggtacattttctaggaaagttgaagaaaaaccttctgttccagttactgtttcagttacttcagctacacctcagaactccacgcctcgttccgcagagaggcctgaagcatcaccttttgaaatccctcatgaaacttcaccatttgaaatccctccttccccttctgaaacttcaccttgggactactttggtcttggccatgatattgataatcatttgacttcacaaaatggaaggattgagaatggaaatgacaatagacatcatgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0157E03-hVmd1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C09HBa0157E03.1" temp_strand="+" temp_description="C09HBa0157E03.1  AC234414.1 htgs_phase:1 submitted_to_sgn_as:gnl|gbrgsp|C09HBa0157E03 upload_account_name:spain (1 - 93835)">
        <position start="88838" stop="90060"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89138" g_stop="89760" g_length="623"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="623" r_length="623" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0157E03.1" gen_strand="+" ref_id="SGN-U343666" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>623</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0157E03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U343666" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89138" e_stop="89760"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGAGGAAGATAAAGCCTTGCAGCTTTGTCGTGAACGGAAGAAGTTTGTAAGGCAAGCTCTTGATGGACGGTGTAATCTAGCCGCGACTCATATAGCTTATATTGAGTCTCTGAAAATTACAGGAACTGTTTTAAGGAGATTTGCTGAACCTGAGGCTCCAATTGGATCTTCAATCTACACTTCAACGAGTGCAACCCCTGAGCTACGTGGATTAACTGAAAAGTCTCTTTCCCATTTTTCATTCTCTTCTCGATCCATCTCACGTCATGTAGATGCAACTGAGAATATCCTACCGTCTCCTTCATCTCCAACCTCAAGTCGATACCATGCTAATCACATGAAATTTAGAGGTACATTTTCTAGGAAAGTTGAAGAAAAACCTTCTGTTCCAGTTACTGTTTCAGTTACTTCAGCTACACCTCAGAACTCCACGCCTCGTTCCGCAGAGAGGCCTGAAGCATCACCTTTTGAAATCCCTCATGAAACTTCACCATTTGAAATCCCTCCTTCCCCTTCTGAAACTTCACCTTGGGACTACTTTGGTCTTGGCCATGATATTGATAATCATTTGACTTCACAAAATGGAAGGATTGAGAATGGAAATGACAATAGACATCATGGA</genome_strand>
        <mrna_strand>TAGAGGAAGATAAAGCCTTGCAGCTTTGTCGTGAACGGAAGAAGTTTGTAAGGCAAGCTCTTGATGGACGGTGTAATCTAGCCGCGACTCATATAGCTTATATTGAGTCTCTGAAAATTACAGGAACTGTTTTAAGGAGATTTGCTGAACCTGAGGCTCCAATTGGATCTTCAATCTACACTTCAACGAGTGCAACCCCTGAGCTACGTGGATTAACTGAAAAGTCTCTTTCCCATTTTTCATTCTCTTCTCGATCCATCTCACGTCATGTAGATGCAACTGAGAATATCCTACCGTCTCCTTCATCTCCAACCTCAAGTCGATACCATGCTAATCACATGAAATTTAGAGGTACATTTTCTAGGAAAGTTGAAGAAAAACCTTCTGTTCCAGTTACTGTTTCAGTTACTTCAGCTACACCTCAGAACTCCACGCCTCGTTCCGCAGAGAGGCCTGAAGCATCACCTTTTGAAATCCCTCATGAAACTTCACCATTTGAAATCCCTCCTTCCCCTTCTGAAACTTCACCTTGGGACTACTTTGGTCTTGGCCATGATATTGATAATCATTTGACTTCACAAAATGGAAGGATTGAGAATGGAAATGACAATAGACATCATGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>23</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="7678" PGL_stop="7030"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="7678" e_stop="7030"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="7678" e_stop="7030" e_length="649"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7678" stop="7030"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U328085" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTGAGTTTTTTTGTAGGAATCCGCAAGTGTTTAATCGGGTATCTGTCCCTGCTCGTCCTGAAGATGCAATGGGAGCTTCCAGTGGACCAAAGCGGCTATCTGGTATGCAGAAGCAAGCACTTGCTCTATATAGAGGATTCTTAAGAGCAGCCCGCTCCAAGCCTGCTGAAGAAAGGAGGCAAATCGAGTCAGTTGTATCCACTGAGTTCCGCAAAAACTCCAAGCAAGTTGATCGTAAGAATTTCATTTATATCGAGTACTTACTTCGTCGTGGTAACAAACAACTTGATCAACTCAAAAGCCCTGATACTGTTGGATTGTCATCATTAAGTGTTGATTCTTCACAAACAACAGGTTCATCCTCCTCCTAGATTTTGTAAAGAAACCACTCTTTTTTTCAACTATTACAATGAGTTGGTTGATTATATAACATCTCTTTTGCTGGGATTATCATACTGAGTATACTAGTATTCAGAAACATTTATATGGTGTTAAAAGAGGATTTTCATCGAGGCTCGAGAGATGGAATAGATTACATTTACGTTTCTTCAATAAAAATTCAAGCTCGACTTGATAGTGTAAAAATTCTTTACAAGCATATCCTATGATTGAATGATAGTTTTTGTAATAGTAGATTGTTTCATAATGT</gDNA_template>
            <first_frame> L  S  F  F  V  G  I  R  K  C  L  I  G  Y  L  S  L  L  V  L  K  M  Q  W  E  L  P  V  D  Q  S  G  Y  L  V  C  R  S  K  H  L  L  Y  I  E  D  S  *  E  Q  P  A  P  S  L  L  K  K  G  G  K  S  S  Q  L  Y  P  L  S  S  A  K  T  P  S  K  L  I  V  R  I  S  F  I  S  S  T  Y  F  V  V  V  T  N  N  L  I  N  S  K  A  L  I  L  L  D  C  H  H  *  V  L  I  L  H  K  Q  Q  V  H  P  P  P  R  F  C  K  E  T  T  L  F  F  N  Y  Y  N  E  L  V  D  Y  I  T  S  L  L  L  G  L  S  Y  *  V  Y  *  Y  S  E  T  F  I  W  C  *  K  R  I  F  I  E  A  R  E  M  E  *  I  T  F  T  F  L  Q  *  K  F  K  L  D  L  I  V  *  K  F  F  T  S  I  S  Y  D  *  M  I  V  F  V  I  V  D  C  F  I  M  </first_frame>
            <second_frame>  *  V  F  L  *  E  S  A  S  V  *  S  G  I  C  P  C  S  S  *  R  C  N  G  S  F  Q  W  T  K  A  A  I  W  Y  A  E  A  S  T  C  S  I  *  R  I  L  K  S  S  P  L  Q  A  C  *  R  K  E  A  N  R  V  S  C  I  H  *  V  P  Q  K  L  Q  A  S  *  S  *  E  F  H  L  Y  R  V  L  T  S  S  W  *  Q  T  T  *  S  T  Q  K  P  *  Y  C  W  I  V  I  I  K  C  *  F  F  T  N  N  R  F  I  L  L  L  D  F  V  K  K  P  L  F  F  S  T  I  T  M  S  W  L  I  I  *  H  L  F  C  W  D  Y  H  T  E  Y  T  S  I  Q  K  H  L  Y  G  V  K  R  G  F  S  S  R  L  E  R  W  N  R  L  H  L  R  F  F  N  K  N  S  S  S  T  *  *  C  K  N  S  L  Q  A  Y  P  M  I  E  *  *  F  L  *  *  *  I  V  S  *  C </second_frame>
            <third_frame>   E  F  F  C  R  N  P  Q  V  F  N  R  V  S  V  P  A  R  P  E  D  A  M  G  A  S  S  G  P  K  R  L  S  G  M  Q  K  Q  A  L  A  L  Y  R  G  F  L  R  A  A  R  S  K  P  A  E  E  R  R  Q  I  E  S  V  V  S  T  E  F  R  K  N  S  K  Q  V  D  R  K  N  F  I  Y  I  E  Y  L  L  R  R  G  N  K  Q  L  D  Q  L  K  S  P  D  T  V  G  L  S  S  L  S  V  D  S  S  Q  T  T  G  S  S  S  S  *  I  L  *  R  N  H  S  F  F  Q  L  L  Q  *  V  G  *  L  Y  N  I  S  F  A  G  I  I  I  L  S  I  L  V  F  R  N  I  Y  M  V  L  K  E  D  F  H  R  G  S  R  D  G  I  D  Y  I  Y  V  S  S  I  K  I  Q  A  R  L  D  S  V  K  I  L  Y  K  H  I  L  *  L  N  D  S  F  C  N  S  R  L  F  H  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0157E03.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7676" stop="7308"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>366</number_coding_nucleotides>
                  <number_encoded_amino_acids>122</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EFFCRNPQVFNRVSVPARPEDAMGASSGPKRLSGMQKQALALYRGFLRAARSKPAEERRQIESVVSTEFRKNSKQVDRKNFIYIEYLLRRGNKQLDQLKSPDTVGLSSLSVDSSQTTGSSSS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="9478" PGL_stop="8959"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="9478" e_stop="8959"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="9478" e_stop="8959" e_length="520"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9478" stop="8959"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U342554" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAATTTCTACCTCAACGACGGCGCAATACACAAAGGTATGCCATTTTTTCCGTTTAGCCATACATTTTGAAGTTGAAATTTGAAATTTTGTGTTTTCGATATTGTGATTTTTTGGAACTTGATGTTATATTTGAACGTATAATTTTTGGGATTTTGTGAATGGAAGTGTAATTATTCCCTAAAACTGTTGAAAATCTGATCTAATTTCACGATGAAACAAGTATTTGAAGATAAAATTTTCAAATTCTGATTCAAAATGTAGGGGGAAAGCTAGCTAGAATTTGATTGACTGGATGCAGTACATATCCTGAACCAGATCTAGATTATAACAAATAAATTTATGTAATCAGTAATTTTTCTAAGATTCGTAAATAGGAAGGTTTGGAAATTGATTATCAGAGCCGATAGTTAGTAAGTAGTCGAGTGTTGTTGTGTGGGAGAGGTAGGAAGCTAGCCTCATCCCCTCCCCTTCTAGTAGTAGTTTTAGTTCGATGCTATCAGCTAATTGTGCTATCGTAAT</gDNA_template>
            <first_frame> E  F  L  P  Q  R  R  R  N  T  Q  R  Y  A  I  F  S  V  *  P  Y  I  L  K  L  K  F  E  I  L  C  F  R  Y  C  D  F  L  E  L  D  V  I  F  E  R  I  I  F  G  I  L  *  M  E  V  *  L  F  P  K  T  V  E  N  L  I  *  F  H  D  E  T  S  I  *  R  *  N  F  Q  I  L  I  Q  N  V  G  G  K  L  A  R  I  *  L  T  G  C  S  T  Y  P  E  P  D  L  D  Y  N  K  *  I  Y  V  I  S  N  F  S  K  I  R  K  *  E  G  L  E  I  D  Y  Q  S  R  *  L  V  S  S  R  V  L  L  C  G  R  G  R  K  L  A  S  S  P  P  L  L  V  V  V  L  V  R  C  Y  Q  L  I  V  L  S  *  </first_frame>
            <second_frame>  N  F  Y  L  N  D  G  A  I  H  K  G  M  P  F  F  P  F  S  H  T  F  *  S  *  N  L  K  F  C  V  F  D  I  V  I  F  W  N  L  M  L  Y  L  N  V  *  F  L  G  F  C  E  W  K  C  N  Y  S  L  K  L  L  K  I  *  S  N  F  T  M  K  Q  V  F  E  D  K  I  F  K  F  *  F  K  M  *  G  E  S  *  L  E  F  D  *  L  D  A  V  H  I  L  N  Q  I  *  I  I  T  N  K  F  M  *  S  V  I  F  L  R  F  V  N  R  K  V  W  K  L  I  I  R  A  D  S  *  *  V  V  E  C  C  C  V  G  E  V  G  S  *  P  H  P  L  P  F  *  *  *  F  *  F  D  A  I  S  *  L  C  Y  R  N </second_frame>
            <third_frame>   I  S  T  S  T  T  A  Q  Y  T  K  V  C  H  F  F  R  L  A  I  H  F  E  V  E  I  *  N  F  V  F  S  I  L  *  F  F  G  T  *  C  Y  I  *  T  Y  N  F  W  D  F  V  N  G  S  V  I  I  P  *  N  C  *  K  S  D  L  I  S  R  *  N  K  Y  L  K  I  K  F  S  N  S  D  S  K  C  R  G  K  A  S  *  N  L  I  D  W  M  Q  Y  I  S  *  T  R  S  R  L  *  Q  I  N  L  C  N  Q  *  F  F  *  D  S  *  I  G  R  F  G  N  *  L  S  E  P  I  V  S  K  *  S  S  V  V  V  W  E  R  *  E  A  S  L  I  P  S  P  S  S  S  S  F  S  S  M  L  S  A  N  C  A  I  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C09HBa0157E03.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="12783" PGL_stop="10609"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="12783" e_stop="12620"/>
            <exon e_start="12463" e_stop="12321"/>
            <exon e_start="11094" e_stop="10609"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.995" e_score="1.000"/>
          <exon-only e_score="0.979"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="12783" e_stop="12620" e_length="164"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.990">
            <gDNA_intron_boundary i_start="12619" i_stop="12464" i_length="156"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="12463" e_stop="12321" e_length="143"/>
          </exon>
          <intron i_serial="2" don_prob="0.983" acc_prob="0.995">
            <gDNA_intron_boundary i_start="12320" i_stop="11095" i_length="1226"/>
          </intron>
          <exon e_serial="3" e_score="0.979">
            <gDNA_exon_boundary e_start="11094" e_stop="10609" e_length="486"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12783" stop="12620"/>
              <exon start="12463" stop="12321"/>
              <exon start="11094" stop="10609"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U330421" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTAAACTAGCAATTTTCACTCATTTCATGCATAATGATACAATCATGCCACCACCATCAACCACCTCTATGAAACACCGCGATTTAGACGCGGTTCTCCTCCTCCTCCTTCTATGTGAACTACGTCAACATGATCCCGAAGCACTCGATCTACCTCCATCAAG : GTGGCGCGTTGTTATTTGTCAATACATAGCTAAAGATGCACTAAAATTCTCTAGCATTAGTTGTTCCAACAGAGAAATCATAATGAAGTTTATTGATTTGCTAGCAAAGTGCAAGAACTTTGTCAAGGCCATGATTCATGCAG : GTGATGGTATTGGAGGAAAAGATCGGAAGGAGGTGGCAACATCGATAGCGACAATAGTAGCACTACCATCAGTAGAAGCGAGCAACGACGACAATGACGGGAGGAAGGAATGTGTTATATGTAAAGAAGAGATGAAAGAAGGAAGAGATGTTTGTAAATTGCCATGTCATCATACATTTCATTGGATATGTATATTGCCTTGGTTGAAAAAAAGGAACACGTGTCCATGTTGTCGATATCAGCTACCGTCCGATGATGTTTACGCTGAGATCCAACGGTTGTGGGAAGTTGTGGCCAAGATGAGTGATAGTGCAAATTTTGTAGGAATTAGTAATTGTAATTAGTTTTTAATTAAGTAAAATTAATCTTATAGAATTAGCATAATATAGTTACTTATGTTTTTTTTCTTCTCCAAGTTATAATATAAAACACTACATTTATCATATGTTTTATATCAATACTATATACATTATCAATTATACCTCA</gDNA_template>
            <first_frame> S  K  L  A  I  F  T  H  F  M  H  N  D  T  I  M  P  P  P  S  T  T  S  M  K  H  R  D  L  D  A  V  L  L  L  L  L  L  C  E  L  R  Q  H  D  P  E  A  L  D  L  P  P  S  R :   W  R  V  V  I  C  Q  Y  I  A  K  D  A  L  K  F  S  S  I  S  C  S  N  R  E  I  I  M  K  F  I  D  L  L  A  K  C  K  N  F  V  K  A  M  I  H  A   : G  D  G  I  G  G  K  D  R  K  E  V  A  T  S  I  A  T  I  V  A  L  P  S  V  E  A  S  N  D  D  N  D  G  R  K  E  C  V  I  C  K  E  E  M  K  E  G  R  D  V  C  K  L  P  C  H  H  T  F  H  W  I  C  I  L  P  W  L  K  K  R  N  T  C  P  C  C  R  Y  Q  L  P  S  D  D  V  Y  A  E  I  Q  R  L  W  E  V  V  A  K  M  S  D  S  A  N  F  V  G  I  S  N  C  N  *  F  L  I  K  *  N  *  S  Y  R  I  S  I  I  *  L  L  M  F  F  F  F  S  K  L  *  Y  K  T  L  H  L  S  Y  V  L  Y  Q  Y  Y  I  H  Y  Q  L  Y  L  </first_frame>
            <second_frame>  L  N  *  Q  F  S  L  I  S  C  I  M  I  Q  S  C  H  H  H  Q  P  P  L  *  N  T  A  I  *  T  R  F  S  S  S  S  F  Y  V  N  Y  V  N  M  I  P  K  H  S  I  Y  L  H  Q   : G  G  A  L  L  F  V  N  T  *  L  K  M  H  *  N  S  L  A  L  V  V  P  T  E  K  S  *  *  S  L  L  I  C  *  Q  S  A  R  T  L  S  R  P  *  F  M  Q  :  V  M  V  L  E  E  K  I  G  R  R  W  Q  H  R  *  R  Q  *  *  H  Y  H  Q  *  K  R  A  T  T  T  M  T  G  G  R  N  V  L  Y  V  K  K  R  *  K  K  E  E  M  F  V  N  C  H  V  I  I  H  F  I  G  Y  V  Y  C  L  G  *  K  K  G  T  R  V  H  V  V  D  I  S  Y  R  P  M  M  F  T  L  R  S  N  G  C  G  K  L  W  P  R  *  V  I  V  Q  I  L  *  E  L  V  I  V  I  S  F  *  L  S  K  I  N  L  I  E  L  A  *  Y  S  Y  L  C  F  F  S  S  P  S  Y  N  I  K  H  Y  I  Y  H  M  F  Y  I  N  T  I  Y  I  I  N  Y  T  S </second_frame>
            <third_frame>   *  T  S  N  F  H  S  F  H  A  *  *  Y  N  H  A  T  T  I  N  H  L  Y  E  T  P  R  F  R  R  G  S  P  P  P  P  S  M  *  T  T  S  T  *  S  R  S  T  R  S  T  S  I  K  :  V  A  R  C  Y  L  S  I  H  S  *  R  C  T  K  I  L  *  H  *  L  F  Q  Q  R  N  H  N  E  V  Y  *  F  A  S  K  V  Q  E  L  C  Q  G  H  D  S  C  R :   *  W  Y  W  R  K  R  S  E  G  G  G  N  I  D  S  D  N  S  S  T  T  I  S  R  S  E  Q  R  R  Q  *  R  E  E  G  M  C  Y  M  *  R  R  D  E  R  R  K  R  C  L  *  I  A  M  S  S  Y  I  S  L  D  M  Y  I  A  L  V  E  K  K  E  H  V  S  M  L  S  I  S  A  T  V  R  *  C  L  R  *  D  P  T  V  V  G  S  C  G  Q  D  E  *  *  C  K  F  C  R  N  *  *  L  *  L  V  F  N  *  V  K  L  I  L  *  N  *  H  N  I  V  T  Y  V  F  F  L  L  Q  V  I  I  *  N  T  T  F  I  I  C  F  I  S  I  L  Y  T  L  S  I  I  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0157E03.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="12783" stop="12620"/>
                    <exon start="12463" stop="12321"/>
                    <exon start="11094" stop="10751"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>648</number_coding_nucleotides>
                  <number_encoded_amino_acids>216</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SKLAIFTHFMHNDTIMPPPSTTSMKHRDLDAVLLLLLLCELRQHDPEALDLPPSRWRVVICQYIAKDALKFSSISCSNREIIMKFIDLLAKCKNFVKAMIHAGDGIGGKDRKEVATSIATIVALPSVEASNDDNDGRKECVICKEEMKEGRDVCKLPCHHTFHWICILPWLKKRNTCPCCRYQLPSDDVYAEIQRLWEVVAKMSDSANFVGISNCN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="24951" PGL_stop="23992"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="24951" e_stop="24761"/>
            <exon e_start="24660" e_stop="24559"/>
            <exon e_start="24485" e_stop="24376"/>
            <exon e_start="24277" e_stop="23992"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.996" e_score="0.995"/>
          <exon-intron don_prob="0.782" acc_prob="0.923" e_score="1.000"/>
          <exon-intron don_prob="0.608" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.969"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="24951" e_stop="24761" e_length="191"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="24760" i_stop="24661" i_length="100"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="24660" e_stop="24559" e_length="102"/>
          </exon>
          <intron i_serial="2" don_prob="0.782" acc_prob="0.923">
            <gDNA_intron_boundary i_start="24558" i_stop="24486" i_length="73"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="24485" e_stop="24376" e_length="110"/>
          </exon>
          <intron i_serial="3" don_prob="0.608" acc_prob="0.000">
            <gDNA_intron_boundary i_start="24375" i_stop="24278" i_length="98"/>
          </intron>
          <exon e_serial="4" e_score="0.969">
            <gDNA_exon_boundary e_start="24277" e_stop="23992" e_length="286"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24951" stop="24761"/>
              <exon start="24660" stop="24559"/>
              <exon start="24485" stop="24376"/>
              <exon start="24277" stop="23992"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U339657" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATGACCTTAGAGAGTGCTCTAATATCAAAACCAGAAATCTAAATGCTGAGTTCTCAAACATACAAGATTGTGCTAATTCTGCCTATGAAGAGTGGACAAACTACATTGAAAGCACAGAAGCCCATCATATCGAGGATTCAACTAGATTGGAATTTTGGAAAAGTAGCCTAGCAGGAAACATCTATTGCTG : CTTAACAAAATCAAAGGGGATCGAAGATGGATGGAGAAATGCCCAAGAATCCCTTCATTCCCAAGAAACAAGAACCATCAACTCAGTCGATTCTATTGTTAA : GAGTGCTATGGAATCTAATGGAAAGATCGGCTCTCAATTTTCCTCCACCGTGACTTCCATACTAGAAGAAACATCTATTTCCAAGAGGAATCTTCTTTTTGTTATGGAAA : GTTTGCTGAAACTTGATCATGATGAATGTGAGAAGATCTGTTCACTTATTCATCCTTGTGTTGAGGATATGAAACAGATGAAAGACAGTCATTCATCCGAAGTATCAGAGATAGCGGAAAATGCAGGAAAAGTATTGACAGATGAGTATAAGGTTAAAGCTCAGAAAACTATGCAAGTATTTTTGAATTAAAACTAAAAAGCATAATACTCAAATTCACACAATGCTATTACAATCTGTATTTCTGAACGGTTTAAATTTTCTCTCTTCATCATTCAGAAAAACCT</gDNA_template>
            <first_frame> N  D  L  R  E  C  S  N  I  K  T  R  N  L  N  A  E  F  S  N  I  Q  D  C  A  N  S  A  Y  E  E  W  T  N  Y  I  E  S  T  E  A  H  H  I  E  D  S  T  R  L  E  F  W  K  S  S  L  A  G  N  I  Y  C  C :   L  T  K  S  K  G  I  E  D  G  W  R  N  A  Q  E  S  L  H  S  Q  E  T  R  T  I  N  S  V  D  S  I  V  K :   S  A  M  E  S  N  G  K  I  G  S  Q  F  S  S  T  V  T  S  I  L  E  E  T  S  I  S  K  R  N  L  L  F  V  M  E   : S  L  L  K  L  D  H  D  E  C  E  K  I  C  S  L  I  H  P  C  V  E  D  M  K  Q  M  K  D  S  H  S  S  E  V  S  E  I  A  E  N  A  G  K  V  L  T  D  E  Y  K  V  K  A  Q  K  T  M  Q  V  F  L  N  *  N  *  K  A  *  Y  S  N  S  H  N  A  I  T  I  C  I  S  E  R  F  K  F  S  L  F  I  I  Q  K  N   </first_frame>
            <second_frame>  M  T  L  E  S  A  L  I  S  K  P  E  I  *  M  L  S  S  Q  T  Y  K  I  V  L  I  L  P  M  K  S  G  Q  T  T  L  K  A  Q  K  P  I  I  S  R  I  Q  L  D  W  N  F  G  K  V  A  *  Q  E  T  S  I  A   : A  *  Q  N  Q  R  G  S  K  M  D  G  E  M  P  K  N  P  F  I  P  K  K  Q  E  P  S  T  Q  S  I  L  L  L   : R  V  L  W  N  L  M  E  R  S  A  L  N  F  P  P  P  *  L  P  Y  *  K  K  H  L  F  P  R  G  I  F  F  L  L  W  K  :  V  C  *  N  L  I  M  M  N  V  R  R  S  V  H  L  F  I  L  V  L  R  I  *  N  R  *  K  T  V  I  H  P  K  Y  Q  R  *  R  K  M  Q  E  K  Y  *  Q  M  S  I  R  L  K  L  R  K  L  C  K  Y  F  *  I  K  T  K  K  H  N  T  Q  I  H  T  M  L  L  Q  S  V  F  L  N  G  L  N  F  L  S  S  S  F  R  K  T  </second_frame>
            <third_frame>   *  P  *  R  V  L  *  Y  Q  N  Q  K  S  K  C  *  V  L  K  H  T  R  L  C  *  F  C  L  *  R  V  D  K  L  H  *  K  H  R  S  P  S  Y  R  G  F  N  *  I  G  I  L  E  K  *  P  S  R  K  H  L  L  L  :  L  N  K  I  K  G  D  R  R  W  M  E  K  C  P  R  I  P  S  F  P  R  N  K  N  H  Q  L  S  R  F  Y  C  *  :  E  C  Y  G  I  *  W  K  D  R  L  S  I  F  L  H  R  D  F  H  T  R  R  N  I  Y  F  Q  E  E  S  S  F  C  Y  G  K :   F  A  E  T  *  S  *  *  M  *  E  D  L  F  T  Y  S  S  L  C  *  G  Y  E  T  D  E  R  Q  S  F  I  R  S  I  R  D  S  G  K  C  R  K  S  I  D  R  *  V  *  G  *  S  S  E  N  Y  A  S  I  F  E  L  K  L  K  S  I  I  L  K  F  T  Q  C  Y  Y  N  L  Y  F  *  T  V  *  I  F  S  L  H  H  S  E  K  P </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0157E03.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24951" stop="24761"/>
                    <exon start="24660" stop="24559"/>
                    <exon start="24485" stop="24376"/>
                    <exon start="24277" stop="24087"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>591</number_coding_nucleotides>
                  <number_encoded_amino_acids>197</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NDLRECSNIKTRNLNAEFSNIQDCANSAYEEWTNYIESTEAHHIEDSTRLEFWKSSLAGNIYCCLTKSKGIEDGWRNAQESLHSQETRTINSVDSIVKSAMESNGKIGSQFSSTVTSILEETSISKRNLLFVMESLLKLDHDECEKICSLIHPCVEDMKQMKDSHSSEVSEIAENAGKVLTDEYKVKAQKTMQVFLN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="24951" e_stop="24559"/>
            <exon e_start="24485" e_stop="24407"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.782" acc_prob="0.923" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="24951" e_stop="24559" e_length="393"/>
          </exon>
          <intron i_serial="1" don_prob="0.782" acc_prob="0.923">
            <gDNA_intron_boundary i_start="24558" i_stop="24486" i_length="73"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="24485" e_stop="24407" e_length="79"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24951" stop="24559"/>
              <exon start="24485" stop="24407"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U339656" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATGACCTTAGAGAGTGCTCTAATATCAAAACCAGAAATCTAAATGCTGAGTTCTCAAACATACAAGATTGTGCTAATTCTGCCTATGAAGAGTGGACAAACTACATTGAAAGCACAGAAGCCCATCATATCGAGGATTCAACTAGATTGGAATTTTGGAAAAGTAGCCTAGCAGGAAACATCTATTGCTGGTTGAGTTGGTTTCGATGATATAAAATTTATAAATATTGCACTGTATTTTGCATTGTATACCTTTAGTCAAGCTATTATATTTCTCATCTTGAATTTCAGCTTAACAAAATCAAAGGGGATCGAAGATGGATGGAGAAATGCCCAAGAATCCCTTCATTCCCAAGAAACAAGAACCATCAACTCAGTCGATTCTATTGTTAA : GAGTGCTATGGAATCTAATGGAAAGATCGGCTCTCAATTTTCCTCCACCGTGACTTCCATACTAGAAGAAACATCTATT</gDNA_template>
            <first_frame> N  D  L  R  E  C  S  N  I  K  T  R  N  L  N  A  E  F  S  N  I  Q  D  C  A  N  S  A  Y  E  E  W  T  N  Y  I  E  S  T  E  A  H  H  I  E  D  S  T  R  L  E  F  W  K  S  S  L  A  G  N  I  Y  C  W  L  S  W  F  R  *  Y  K  I  Y  K  Y  C  T  V  F  C  I  V  Y  L  *  S  S  Y  Y  I  S  H  L  E  F  Q  L  N  K  I  K  G  D  R  R  W  M  E  K  C  P  R  I  P  S  F  P  R  N  K  N  H  Q  L  S  R  F  Y  C  *  :  E  C  Y  G  I  *  W  K  D  R  L  S  I  F  L  H  R  D  F  H  T  R  R  N  I  Y  </first_frame>
            <second_frame>  M  T  L  E  S  A  L  I  S  K  P  E  I  *  M  L  S  S  Q  T  Y  K  I  V  L  I  L  P  M  K  S  G  Q  T  T  L  K  A  Q  K  P  I  I  S  R  I  Q  L  D  W  N  F  G  K  V  A  *  Q  E  T  S  I  A  G  *  V  G  F  D  D  I  K  F  I  N  I  A  L  Y  F  A  L  Y  T  F  S  Q  A  I  I  F  L  I  L  N  F  S  L  T  K  S  K  G  I  E  D  G  W  R  N  A  Q  E  S  L  H  S  Q  E  T  R  T  I  N  S  V  D  S  I  V  K :   S  A  M  E  S  N  G  K  I  G  S  Q  F  S  S  T  V  T  S  I  L  E  E  T  S  I </second_frame>
            <third_frame>   *  P  *  R  V  L  *  Y  Q  N  Q  K  S  K  C  *  V  L  K  H  T  R  L  C  *  F  C  L  *  R  V  D  K  L  H  *  K  H  R  S  P  S  Y  R  G  F  N  *  I  G  I  L  E  K  *  P  S  R  K  H  L  L  L  V  E  L  V  S  M  I  *  N  L  *  I  L  H  C  I  L  H  C  I  P  L  V  K  L  L  Y  F  S  S  *  I  S  A  *  Q  N  Q  R  G  S  K  M  D  G  E  M  P  K  N  P  F  I  P  K  K  Q  E  P  S  T  Q  S  I  L  L  L   : R  V  L  W  N  L  M  E  R  S  A  L  N  F  P  P  P  *  L  P  Y  *  K  K  H  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0157E03.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24755" stop="24559"/>
                    <exon start="24485" stop="24407"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>276</number_coding_nucleotides>
                  <number_encoded_amino_acids>92</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VGFDDIKFINIALYFALYTFSQAIIFLILNFSLTKSKGIEDGWRNAQESLHSQETRTINSVDSIVKSAMESNGKIGSQFSSTVTSILEETSI</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0157E03.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24951" stop="24742"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NDLRECSNIKTRNLNAEFSNIQDCANSAYEEWTNYIESTEAHHIEDSTRLEFWKSSLAGNIYCWLSWFR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="27286" PGL_stop="25919"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="27286" e_stop="27207"/>
            <exon e_start="27107" e_stop="27054"/>
            <exon e_start="26966" e_stop="26886"/>
            <exon e_start="26784" e_stop="26673"/>
            <exon e_start="26508" e_stop="26422"/>
            <exon e_start="26336" e_stop="26161"/>
            <exon e_start="26075" e_stop="25919"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.968" acc_prob="0.997" e_score="0.988"/>
          <exon-intron don_prob="0.999" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.865" acc_prob="0.708" e_score="1.000"/>
          <exon-intron don_prob="0.903" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.416" acc_prob="0.983" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="27286" e_stop="27207" e_length="80"/>
          </exon>
          <intron i_serial="1" don_prob="0.968" acc_prob="0.997">
            <gDNA_intron_boundary i_start="27206" i_stop="27108" i_length="99"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="27107" e_stop="27054" e_length="54"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.000">
            <gDNA_intron_boundary i_start="27053" i_stop="26967" i_length="87"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="26966" e_stop="26886" e_length="81"/>
          </exon>
          <intron i_serial="3" don_prob="0.865" acc_prob="0.708">
            <gDNA_intron_boundary i_start="26885" i_stop="26785" i_length="101"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="26784" e_stop="26673" e_length="112"/>
          </exon>
          <intron i_serial="4" don_prob="0.903" acc_prob="0.983">
            <gDNA_intron_boundary i_start="26672" i_stop="26509" i_length="164"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="26508" e_stop="26422" e_length="87"/>
          </exon>
          <intron i_serial="5" don_prob="0.985" acc_prob="0.997">
            <gDNA_intron_boundary i_start="26421" i_stop="26337" i_length="85"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="26336" e_stop="26161" e_length="176"/>
          </exon>
          <intron i_serial="6" don_prob="0.416" acc_prob="0.983">
            <gDNA_intron_boundary i_start="26160" i_stop="26076" i_length="85"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="26075" e_stop="25919" e_length="157"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27286" stop="27207"/>
              <exon start="27107" stop="27054"/>
              <exon start="26966" stop="26886"/>
              <exon start="26784" stop="26673"/>
              <exon start="26508" stop="26422"/>
              <exon start="26336" stop="26161"/>
              <exon start="26075" stop="25919"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U331615" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAGAATTACATGCAACGAGGGAGAAGAATGGAATCTACATACCTCAAGATCGTTACCTGAGTGAAGAAGCAGCTCATAAG : GCGATAGTTGAGAAACTGAAGTTCACAGAACTTGATTTAGAGTCCAAAAATAAG : AAACTGATAGAGCTTCAGGATCTTTATGATAATCAGCAACAACTGACAGCAGATTTAACTGAACAACTTCAGAGAACTCGG : AGAGAACTAAAGAAAGCAGAACAAGCTTTCTATGATCTAGAAGCTCAAAATAGGCGAGCGAAAGAAGTGATTCAAGAGAAGGATTCTCTAGTATCCGACCTCATTAAATCTG : AAAAGGAAATGACTAATAAAGCACTTGAGTTTCGAGCTGAAGTAGAGAATGCAGAATCAGAGATATCCAGCTTGTTCGCCAAAATTG : AAAAAGGCAACAGTAGAGAGGAAAGAAACAGAATCCTTGTGCAAAGCTACCGCAGCAAATTAACTCAGCAGCTTGAAATTTTAAAGAGAAAAACAGCAAATTCTGTAAGCAAACAAGAGCAGCAATTGAATGTAATATTAGAAGATATGCAATCCTTCTTAGCTACTAAAAGAAGG : GCTACAGATGAATTGAAGGTTCAGCTCCAGAAGCTGAAAGACAATTATAACTCCGATATCCAGAATTTAGCTGTTCCAGCCCGAGATCTTCATGAAAATTCTCAGCTAGCTTTAAGCAAAGTGAATTCAGCAATATCAAAGCATTCTTCTGCTTTTA</gDNA_template>
            <first_frame> Q  N  Y  M  Q  R  G  R  R  M  E  S  T  Y  L  K  I  V  T  *  V  K  K  Q  L  I  R :   R  *  L  R  N  *  S  S  Q  N  L  I  *  S  P  K  I  R :   N  *  *  S  F  R  I  F  M  I  I  S  N  N  *  Q  Q  I  *  L  N  N  F  R  E  L  G :   E  N  *  R  K  Q  N  K  L  S  M  I  *  K  L  K  I  G  E  R  K  K  *  F  K  R  R  I  L  *  Y  P  T  S  L  N  L  :  K  R  K  *  L  I  K  H  L  S  F  E  L  K  *  R  M  Q  N  Q  R  Y  P  A  C  S  P  K  L  :  K  K  A  T  V  E  R  K  E  T  E  S  L  C  K  A  T  A  A  N  *  L  S  S  L  K  F  *  R  E  K  Q  Q  I  L  *  A  N  K  S  S  N  *  M  *  Y  *  K  I  C  N  P  S  *  L  L  K  E  G :   L  Q  M  N  *  R  F  S  S  R  S  *  K  T  I  I  T  P  I  S  R  I  *  L  F  Q  P  E  I  F  M  K  I  L  S  *  L  *  A  K  *  I  Q  Q  Y  Q  S  I  L  L  L  L </first_frame>
            <second_frame>  R  I  T  C  N  E  G  E  E  W  N  L  H  T  S  R  S  L  P  E  *  R  S  S  S  *   : G  D  S  *  E  T  E  V  H  R  T  *  F  R  V  Q  K  *   : E  T  D  R  A  S  G  S  L  *  *  S  A  T  T  D  S  R  F  N  *  T  T  S  E  N  S   : E  R  T  K  E  S  R  T  S  F  L  *  S  R  S  S  K  *  A  S  E  R  S  D  S  R  E  G  F  S  S  I  R  P  H  *  I  * :   K  G  N  D  *  *  S  T  *  V  S  S  *  S  R  E  C  R  I  R  D  I  Q  L  V  R  Q  N  * :   K  R  Q  Q  *  R  G  K  K  Q  N  P  C  A  K  L  P  Q  Q  I  N  S  A  A  *  N  F  K  E  K  N  S  K  F  C  K  Q  T  R  A  A  I  E  C  N  I  R  R  Y  A  I  L  L  S  Y  *  K  K   : G  Y  R  *  I  E  G  S  A  P  E  A  E  R  Q  L  *  L  R  Y  P  E  F  S  C  S  S  P  R  S  S  *  K  F  S  A  S  F  K  Q  S  E  F  S  N  I  K  A  F  F  C  F   </second_frame>
            <third_frame>   E  L  H  A  T  R  E  K  N  G  I  Y  I  P  Q  D  R  Y  L  S  E  E  A  A  H  K  :  A  I  V  E  K  L  K  F  T  E  L  D  L  E  S  K  N  K  :  K  L  I  E  L  Q  D  L  Y  D  N  Q  Q  Q  L  T  A  D  L  T  E  Q  L  Q  R  T  R  :  R  E  L  K  K  A  E  Q  A  F  Y  D  L  E  A  Q  N  R  R  A  K  E  V  I  Q  E  K  D  S  L  V  S  D  L  I  K  S   : E  K  E  M  T  N  K  A  L  E  F  R  A  E  V  E  N  A  E  S  E  I  S  S  L  F  A  K  I   : E  K  G  N  S  R  E  E  R  N  R  I  L  V  Q  S  Y  R  S  K  L  T  Q  Q  L  E  I  L  K  R  K  T  A  N  S  V  S  K  Q  E  Q  Q  L  N  V  I  L  E  D  M  Q  S  F  L  A  T  K  R  R  :  A  T  D  E  L  K  V  Q  L  Q  K  L  K  D  N  Y  N  S  D  I  Q  N  L  A  V  P  A  R  D  L  H  E  N  S  Q  L  A  L  S  K  V  N  S  A  I  S  K  H  S  S  A  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0157E03.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="27284" stop="27207"/>
                    <exon start="27107" stop="27054"/>
                    <exon start="26966" stop="26886"/>
                    <exon start="26784" stop="26673"/>
                    <exon start="26508" stop="26422"/>
                    <exon start="26336" stop="26161"/>
                    <exon start="26075" stop="25920"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>744</number_coding_nucleotides>
                  <number_encoded_amino_acids>248</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ELHATREKNGIYIPQDRYLSEEAAHKAIVEKLKFTELDLESKNKKLIELQDLYDNQQQLTADLTEQLQRTRRELKKAEQAFYDLEAQNRRAKEVIQEKDSLVSDLIKSEKEMTNKALEFRAEVENAESEISSLFAKIEKGNSREERNRILVQSYRSKLTQQLEILKRKTANSVSKQEQQLNVILEDMQSFLATKRRATDELKVQLQKLKDNYNSDIQNLAVPARDLHENSQLALSKVNSAISKHSSAF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="30429" PGL_stop="29019"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="30429" e_stop="30297"/>
            <exon e_start="29918" e_stop="29789"/>
            <exon e_start="29702" e_stop="29544"/>
            <exon e_start="29181" e_stop="29019"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.842" acc_prob="0.634" e_score="1.000"/>
          <exon-intron don_prob="0.601" acc_prob="0.515" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="30429" e_stop="30297" e_length="133"/>
          </exon>
          <intron i_serial="1" don_prob="0.842" acc_prob="0.634">
            <gDNA_intron_boundary i_start="30296" i_stop="29919" i_length="378"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="29918" e_stop="29789" e_length="130"/>
          </exon>
          <intron i_serial="2" don_prob="0.601" acc_prob="0.515">
            <gDNA_intron_boundary i_start="29788" i_stop="29703" i_length="86"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="29702" e_stop="29544" e_length="159"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="29543" i_stop="29182" i_length="362"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="29181" e_stop="29019" e_length="163"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30429" stop="30297"/>
              <exon start="29918" stop="29789"/>
              <exon start="29702" stop="29544"/>
              <exon start="29181" stop="29019"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U340434" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAGAAGAGGGAGTTCTTCTCCTTTCTTGATGTCTCAAACACTATGGTCATCAACAGAAAAAACATGCAGATCAGGATTGATCAGATCAAATGATGAAAAAGGGGTAAATGTGAAAGTTGTATTGCGTTGCAG : GCCACCAAATGAGGATGAAATGAAGATGAAAGGCCCTTTGGTGATCTCATGCGACGAGCTGAAACAAGAAGTCACTGCAACATTGAACACAACTACTAAGCAAATAAACAAATCATTTCTATTTGATAAG : GTTTGTGGTCCATCAACTCAGCAAAAGGACTTCTATGATCAGTCTGTGGCTCCTCTTGTTAATGAGGCGCTCGAAGGATATACTTGTACTATTTTTGCTTATGGCCAAACTGGAACAGGAAAAACTTACACAATGGAAGGGGAAGCAATTAAAGAGAAG : AATGGGGAGTTTCACAAGAATGCTGGAGTAATACCTAGAGCAGTCCAAGAGATTTTTGACATTTTGGAGTCTCAAAAGGCTGAGTACACTATGAAAGTTGCATATATAGAAATTTATAATGAGGAGATAACAGATCTTCTTTCCCTGGACGAGGAATCAAAAC</gDNA_template>
            <first_frame> K  E  E  G  V  L  L  L  S  *  C  L  K  H  Y  G  H  Q  Q  K  K  H  A  D  Q  D  *  S  D  Q  M  M  K  K  G  *  M  *  K  L  Y  C  V  A   : G  H  Q  M  R  M  K  *  R  *  K  A  L  W  *  S  H  A  T  S  *  N  K  K  S  L  Q  H  *  T  Q  L  L  S  K  *  T  N  H  F  Y  L  I  R :   F  V  V  H  Q  L  S  K  R  T  S  M  I  S  L  W  L  L  L  L  M  R  R  S  K  D  I  L  V  L  F  L  L  M  A  K  L  E  Q  E  K  L  T  Q  W  K  G  K  Q  L  K  R  R :   M  G  S  F  T  R  M  L  E  *  Y  L  E  Q  S  K  R  F  L  T  F  W  S  L  K  R  L  S  T  L  *  K  L  H  I  *  K  F  I  M  R  R  *  Q  I  F  F  P  W  T  R  N  Q  N </first_frame>
            <second_frame>  K  K  R  E  F  F  S  F  L  D  V  S  N  T  M  V  I  N  R  K  N  M  Q  I  R  I  D  Q  I  K  *  *  K  R  G  K  C  E  S  C  I  A  L  Q  :  A  T  K  *  G  *  N  E  D  E  R  P  F  G  D  L  M  R  R  A  E  T  R  S  H  C  N  I  E  H  N  Y  *  A  N  K  Q  I  I  S  I  *  *   : G  L  W  S  I  N  S  A  K  G  L  L  *  S  V  C  G  S  S  C  *  *  G  A  R  R  I  Y  L  Y  Y  F  C  L  W  P  N  W  N  R  K  N  L  H  N  G  R  G  S  N  *  R  E   : E  W  G  V  S  Q  E  C  W  S  N  T  *  S  S  P  R  D  F  *  H  F  G  V  S  K  G  *  V  H  Y  E  S  C  I  Y  R  N  L  *  *  G  D  N  R  S  S  F  P  G  R  G  I  K   </second_frame>
            <third_frame>   R  R  G  S  S  S  P  F  L  M  S  Q  T  L  W  S  S  T  E  K  T  C  R  S  G  L  I  R  S  N  D  E  K  G  V  N  V  K  V  V  L  R  C  R :   P  P  N  E  D  E  M  K  M  K  G  P  L  V  I  S  C  D  E  L  K  Q  E  V  T  A  T  L  N  T  T  T  K  Q  I  N  K  S  F  L  F  D  K  :  V  C  G  P  S  T  Q  Q  K  D  F  Y  D  Q  S  V  A  P  L  V  N  E  A  L  E  G  Y  T  C  T  I  F  A  Y  G  Q  T  G  T  G  K  T  Y  T  M  E  G  E  A  I  K  E  K  :  N  G  E  F  H  K  N  A  G  V  I  P  R  A  V  Q  E  I  F  D  I  L  E  S  Q  K  A  E  Y  T  M  K  V  A  Y  I  E  I  Y  N  E  E  I  T  D  L  L  S  L  D  E  E  S  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0157E03.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="30427" stop="30297"/>
                    <exon start="29918" stop="29789"/>
                    <exon start="29702" stop="29544"/>
                    <exon start="29181" stop="29020"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>582</number_coding_nucleotides>
                  <number_encoded_amino_acids>194</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RRGSSSPFLMSQTLWSSTEKTCRSGLIRSNDEKGVNVKVVLRCRPPNEDEMKMKGPLVISCDELKQEVTATLNTTTKQINKSFLFDKVCGPSTQQKDFYDQSVAPLVNEALEGYTCTIFAYGQTGTGKTYTMEGEAIKEKNGEFHKNAGVIPRAVQEIFDILESQKAEYTMKVAYIEIYNEEITDLLSLDEESK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="33897" PGL_stop="33319"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="33897" e_stop="33319"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="33897" e_stop="33319" e_length="579"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33897" stop="33319"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U339116" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTCTCTCAAAGCAAAAATGGGGTTGTTTAACATGTCATTGTTACTTATGACTTGTCTCATGGTATTAGCCATATTTCACTCTTGTGATGCTCAAAATTCACCCCAAGACTATCTTGAGGTTCACAACGACGCCCGTGCCCAAGTCGGAGTCGGGCCAATGTCTTGGGATGCCGACTTGGAATCCCGAGCACAAAGCTATGCCAACTCAAGAGCGGGTGATTGTAACTTGATTCATTCTGGTTCAGGGGAGAATCTTGCCAAGGGTGGTGGTGACTTCACGGGGAGGGCCGCTGTGGAATTGTGGGTGTCGGAAAAGCCAAACTACAACTACGATACGAATGAATGTGTTAGCGGAAAAATGTGCGGACATTATACTCAAGTAGTCTGGCGTGACTCAGTTCGACTAGGTTGTGGTCGGGCTCTTTGCAACGACGGGTGGTGGTTTATTTCTTGCAACTATGATCCTGTAGGCAATTGGGTCGGACAACGTCCTTACTAAAATGTTTTTTTTTTTTTGTATGATGTGTAAGGGATCAAATAATTATTATTATTTCCCTTTGATGTTTGCTAGTATGAAT</gDNA_template>
            <first_frame> F  L  S  K  Q  K  W  G  C  L  T  C  H  C  Y  L  *  L  V  S  W  Y  *  P  Y  F  T  L  V  M  L  K  I  H  P  K  T  I  L  R  F  T  T  T  P  V  P  K  S  E  S  G  Q  C  L  G  M  P  T  W  N  P  E  H  K  A  M  P  T  Q  E  R  V  I  V  T  *  F  I  L  V  Q  G  R  I  L  P  R  V  V  V  T  S  R  G  G  P  L  W  N  C  G  C  R  K  S  Q  T  T  T  T  I  R  M  N  V  L  A  E  K  C  A  D  I  I  L  K  *  S  G  V  T  Q  F  D  *  V  V  V  G  L  F  A  T  T  G  G  G  L  F  L  A  T  M  I  L  *  A  I  G  S  D  N  V  L  T  K  M  F  F  F  F  C  M  M  C  K  G  S  N  N  Y  Y  Y  F  P  L  M  F  A  S  M  N </first_frame>
            <second_frame>  F  S  Q  S  K  N  G  V  V  *  H  V  I  V  T  Y  D  L  S  H  G  I  S  H  I  S  L  L  *  C  S  K  F  T  P  R  L  S  *  G  S  Q  R  R  P  C  P  S  R  S  R  A  N  V  L  G  C  R  L  G  I  P  S  T  K  L  C  Q  L  K  S  G  *  L  *  L  D  S  F  W  F  R  G  E  S  C  Q  G  W  W  *  L  H  G  E  G  R  C  G  I  V  G  V  G  K  A  K  L  Q  L  R  Y  E  *  M  C  *  R  K  N  V  R  T  L  Y  S  S  S  L  A  *  L  S  S  T  R  L  W  S  G  S  L  Q  R  R  V  V  V  Y  F  L  Q  L  *  S  C  R  Q  L  G  R  T  T  S  L  L  K  C  F  F  F  F  V  *  C  V  R  D  Q  I  I  I  I  I  S  L  *  C  L  L  V  *   </second_frame>
            <third_frame>   S  L  K  A  K  M  G  L  F  N  M  S  L  L  L  M  T  C  L  M  V  L  A  I  F  H  S  C  D  A  Q  N  S  P  Q  D  Y  L  E  V  H  N  D  A  R  A  Q  V  G  V  G  P  M  S  W  D  A  D  L  E  S  R  A  Q  S  Y  A  N  S  R  A  G  D  C  N  L  I  H  S  G  S  G  E  N  L  A  K  G  G  G  D  F  T  G  R  A  A  V  E  L  W  V  S  E  K  P  N  Y  N  Y  D  T  N  E  C  V  S  G  K  M  C  G  H  Y  T  Q  V  V  W  R  D  S  V  R  L  G  C  G  R  A  L  C  N  D  G  W  W  F  I  S  C  N  Y  D  P  V  G  N  W  V  G  Q  R  P  Y  *  N  V  F  F  F  L  Y  D  V  *  G  I  K  *  L  L  L  F  P  F  D  V  C  *  Y  E  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0157E03.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="33895" stop="33398"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>495</number_coding_nucleotides>
                  <number_encoded_amino_acids>165</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLKAKMGLFNMSLLLMTCLMVLAIFHSCDAQNSPQDYLEVHNDARAQVGVGPMSWDADLESRAQSYANSRAGDCNLIHSGSGENLAKGGGDFTGRAAVELWVSEKPNYNYDTNECVSGKMCGHYTQVVWRDSVRLGCGRALCNDGWWFISCNYDPVGNWVGQRPY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="36596" PGL_stop="37028"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="36596" e_stop="37028"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.945"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.945">
            <gDNA_exon_boundary e_start="36596" e_stop="37028" e_length="433"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36596" stop="37028"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U339055" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTGTGGATAGGTCCTATATATTATTAACACTACTTGATTTTTAAATATATAAATTTCATAATTTTGAAAAAGTAAAGAACCTAAGCCACGATACCATGAACATATGGTACGTGGAATTATTCATACTAGCAACATCAAAGGGAAACAACAACAACAACAATAATAATAGGATATCAATCCGATCCACTTATCATTTTAATTCCTAGACATGTAATATGGAAATTTTATTTAGTACTAGCAACATGTCAGAAATAGACGATACTTTAATAAGGACGTTCTCCAACCCAGTTGCCTACAGGATCGTAGTTGCAAGAAATGAACCACCACCCATTGTTGCAACGAGCCCGACCACAACCTAGTCGGACTGAGTTGCGCCAGACTACTTGAGTATAATGTCCACACATTTTTCCACCAACACATTGGTTGGTAGCG</gDNA_template>
            <first_frame> F  V  D  R  S  Y  I  L  L  T  L  L  D  F  *  I  Y  K  F  H  N  F  E  K  V  K  N  L  S  H  D  T  M  N  I  W  Y  V  E  L  F  I  L  A  T  S  K  G  N  N  N  N  N  N  N  N  R  I  S  I  R  S  T  Y  H  F  N  S  *  T  C  N  M  E  I  L  F  S  T  S  N  M  S  E  I  D  D  T  L  I  R  T  F  S  N  P  V  A  Y  R  I  V  V  A  R  N  E  P  P  P  I  V  A  T  S  P  T  T  T  *  S  D  *  V  A  P  D  Y  L  S  I  M  S  T  H  F  S  T  N  T  L  V  G  S  </first_frame>
            <second_frame>  L  W  I  G  P  I  Y  Y  *  H  Y  L  I  F  K  Y  I  N  F  I  I  L  K  K  *  R  T  *  A  T  I  P  *  T  Y  G  T  W  N  Y  S  Y  *  Q  H  Q  R  E  T  T  T  T  T  I  I  I  G  Y  Q  S  D  P  L  I  I  L  I  P  R  H  V  I  W  K  F  Y  L  V  L  A  T  C  Q  K  *  T  I  L  *  *  G  R  S  P  T  Q  L  P  T  G  S  *  L  Q  E  M  N  H  H  P  L  L  Q  R  A  R  P  Q  P  S  R  T  E  L  R  Q  T  T  *  V  *  C  P  H  I  F  P  P  T  H  W  L  V  A </second_frame>
            <third_frame>   C  G  *  V  L  Y  I  I  N  T  T  *  F  L  N  I  *  I  S  *  F  *  K  S  K  E  P  K  P  R  Y  H  E  H  M  V  R  G  I  I  H  T  S  N  I  K  G  K  Q  Q  Q  Q  Q  *  *  *  D  I  N  P  I  H  L  S  F  *  F  L  D  M  *  Y  G  N  F  I  *  Y  *  Q  H  V  R  N  R  R  Y  F  N  K  D  V  L  Q  P  S  C  L  Q  D  R  S  C  K  K  *  T  T  T  H  C  C  N  E  P  D  H  N  L  V  G  L  S  C  A  R  L  L  E  Y  N  V  H  T  F  F  H  Q  H  I  G  W  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C09HBa0157E03.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="45246" PGL_stop="57306"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="45246" e_stop="45934"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="45246" e_stop="45934" e_length="689"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45246" stop="45934"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U314863" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTCTCTCAACTACACCTAAAATTCAATGGGGTTATTCGAAAACACATTGTTTCTCTTTTGTTTCATGATATTAGCCATATTTCACTCTTGTGACGCTCAAAATTCACCACAAGACTATCTTGTGGTTCACAACAATGCTCGTGGTCAAGTCGGGGTTGGGCCTATGTCTTGGGATGATGCCTTGGCAACCAAAGCACAAAGGTATGCTGACTCAAGAAGAGGTGATTGCAACTTGATTCATTCTGGTCCAGGGGAGAATCTTGCCAAGGGTAGTGGAGATTTCACAGGGAGGCGTGCCTCTGAATTGTGGGTGGCGGAGAAGCCAAACTACAACTATGGTACCAACCAATGTGCTAGTGGGAAAGTGTGCGGACACTATACTCAAGTAGTTTGGCGTACCTCGATCAGGCTAGGTTGTGGTCGGGCTCGTTGTAACAACGGGTGGTGGTTCATTTGTTGCAACTATGCTCCTTTTGGTAACATCATCGGACAACGTCCTTACTAAAACTATGTTAACTTATGACATATTATATTATATGTATTAGTATTAAATAAAATTCCCCACCCTATATGTCAAAGGGATTAAATGGAGTTGCATAATTATTATTTTCCCTTGATATTGCTAGTATGAATAATTTCATGTACCATATTTTCATGGTATAGGGAAGGGTGGGCATGTTATAATATTA</gDNA_template>
            <first_frame> L  S  Q  L  H  L  K  F  N  G  V  I  R  K  H  I  V  S  L  L  F  H  D  I  S  H  I  S  L  L  *  R  S  K  F  T  T  R  L  S  C  G  S  Q  Q  C  S  W  S  S  R  G  W  A  Y  V  L  G  *  C  L  G  N  Q  S  T  K  V  C  *  L  K  K  R  *  L  Q  L  D  S  F  W  S  R  G  E  S  C  Q  G  *  W  R  F  H  R  E  A  C  L  *  I  V  G  G  G  E  A  K  L  Q  L  W  Y  Q  P  M  C  *  W  E  S  V  R  T  L  Y  S  S  S  L  A  Y  L  D  Q  A  R  L  W  S  G  S  L  *  Q  R  V  V  V  H  L  L  Q  L  C  S  F  W  *  H  H  R  T  T  S  L  L  K  L  C  *  L  M  T  Y  Y  I  I  C  I  S  I  K  *  N  S  P  P  Y  M  S  K  G  L  N  G  V  A  *  L  L  F  S  L  D  I  A  S  M  N  N  F  M  Y  H  I  F  M  V  *  G  R  V  G  M  L  *  Y   </first_frame>
            <second_frame>  S  L  N  Y  T  *  N  S  M  G  L  F  E  N  T  L  F  L  F  C  F  M  I  L  A  I  F  H  S  C  D  A  Q  N  S  P  Q  D  Y  L  V  V  H  N  N  A  R  G  Q  V  G  V  G  P  M  S  W  D  D  A  L  A  T  K  A  Q  R  Y  A  D  S  R  R  G  D  C  N  L  I  H  S  G  P  G  E  N  L  A  K  G  S  G  D  F  T  G  R  R  A  S  E  L  W  V  A  E  K  P  N  Y  N  Y  G  T  N  Q  C  A  S  G  K  V  C  G  H  Y  T  Q  V  V  W  R  T  S  I  R  L  G  C  G  R  A  R  C  N  N  G  W  W  F  I  C  C  N  Y  A  P  F  G  N  I  I  G  Q  R  P  Y  *  N  Y  V  N  L  *  H  I  I  L  Y  V  L  V  L  N  K  I  P  H  P  I  C  Q  R  D  *  M  E  L  H  N  Y  Y  F  P  L  I  L  L  V  *  I  I  S  C  T  I  F  S  W  Y  R  E  G  W  A  C  Y  N  I  </second_frame>
            <third_frame>   L  S  T  T  P  K  I  Q  W  G  Y  S  K  T  H  C  F  S  F  V  S  *  Y  *  P  Y  F  T  L  V  T  L  K  I  H  H  K  T  I  L  W  F  T  T  M  L  V  V  K  S  G  L  G  L  C  L  G  M  M  P  W  Q  P  K  H  K  G  M  L  T  Q  E  E  V  I  A  T  *  F  I  L  V  Q  G  R  I  L  P  R  V  V  E  I  S  Q  G  G  V  P  L  N  C  G  W  R  R  S  Q  T  T  T  M  V  P  T  N  V  L  V  G  K  C  A  D  T  I  L  K  *  F  G  V  P  R  S  G  *  V  V  V  G  L  V  V  T  T  G  G  G  S  F  V  A  T  M  L  L  L  V  T  S  S  D  N  V  L  T  K  T  M  L  T  Y  D  I  L  Y  Y  M  Y  *  Y  *  I  K  F  P  T  L  Y  V  K  G  I  K  W  S  C  I  I  I  I  F  P  *  Y  C  *  Y  E  *  F  H  V  P  Y  F  H  G  I  G  K  G  G  H  V  I  I  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0157E03.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="45265" stop="45750"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>483</number_coding_nucleotides>
                  <number_encoded_amino_acids>161</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NSMGLFENTLFLFCFMILAIFHSCDAQNSPQDYLVVHNNARGQVGVGPMSWDDALATKAQRYADSRRGDCNLIHSGPGENLAKGSGDFTGRRASELWVAEKPNYNYGTNQCASGKVCGHYTQVVWRTSIRLGCGRARCNNGWWFICCNYAPFGNIIGQRPY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="51935" e_stop="52574"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.981">
            <gDNA_exon_boundary e_start="51935" e_stop="52574" e_length="640"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51935" stop="52574"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U339131" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTCATAATCACAATAATTTAGATTTCTTTTCTCTCTACTACTCCTATAGCAAAATGGGGTTGTTTAACATCTCATTTTTGCTCATTAGTCTCATGGTATTAACCATATTTCACACTTGTGATTCCCAAAATTCACCCCAAGACTATTTTGCGGTTCACAACGATGCCTGCGCCCAAGTTGGAGTTGGGCCAATGTCTTAGGATGCTTCACAACGATGCCCGCGCCCAAGTTGGAATTGGGCCAATGTCTTAGGATGCTGGCTTGGCATCTCGAGCACAAAATTATGCCAACTCAAGAGCTGGTAATTGCAACTTGATTCATTCTGGTGCATGGGAGAACCTTGCCAAGACCGGTGGTAATTTCACGGGGAGGGCCGCCGTGCAATTGTGGGTATCGAAAAAGCTAAACTACAACTACGGTACCCACCAATGTGCTAGCGGGCAAATGTGCGGACATTATACTCAAGTAGTTGGCGCAACTCAGTCCGACTAGGTTGTGGTCGGGTTCGTTGTAACAACGGGTGGTGGTTCATTTCTTGCAACTATGATCATGTAGGCAACTGGGCCGGAAAACGTCCTTATTAAGGTGTCGTTTATTTATGACATATTGCTAGTATTAAATAAAATTTTTATATTACAT</gDNA_template>
            <first_frame> I  H  N  H  N  N  L  D  F  F  S  L  Y  Y  S  Y  S  K  M  G  L  F  N  I  S  F  L  L  I  S  L  M  V  L  T  I  F  H  T  C  D  S  Q  N  S  P  Q  D  Y  F  A  V  H  N  D  A  C  A  Q  V  G  V  G  P  M  S  *  D  A  S  Q  R  C  P  R  P  S  W  N  W  A  N  V  L  G  C  W  L  G  I  S  S  T  K  L  C  Q  L  K  S  W  *  L  Q  L  D  S  F  W  C  M  G  E  P  C  Q  D  R  W  *  F  H  G  E  G  R  R  A  I  V  G  I  E  K  A  K  L  Q  L  R  Y  P  P  M  C  *  R  A  N  V  R  T  L  Y  S  S  S  W  R  N  S  V  R  L  G  C  G  R  V  R  C  N  N  G  W  W  F  I  S  C  N  Y  D  H  V  G  N  W  A  G  K  R  P  Y  *  G  V  V  Y  L  *  H  I  A  S  I  K  *  N  F  Y  I  T  </first_frame>
            <second_frame>  F  I  I  T  I  I  *  I  S  F  L  S  T  T  P  I  A  K  W  G  C  L  T  S  H  F  C  S  L  V  S  W  Y  *  P  Y  F  T  L  V  I  P  K  I  H  P  K  T  I  L  R  F  T  T  M  P  A  P  K  L  E  L  G  Q  C  L  R  M  L  H  N  D  A  R  A  Q  V  G  I  G  P  M  S  *  D  A  G  L  A  S  R  A  Q  N  Y  A  N  S  R  A  G  N  C  N  L  I  H  S  G  A  W  E  N  L  A  K  T  G  G  N  F  T  G  R  A  A  V  Q  L  W  V  S  K  K  L  N  Y  N  Y  G  T  H  Q  C  A  S  G  Q  M  C  G  H  Y  T  Q  V  V  G  A  T  Q  S  D  *  V  V  V  G  F  V  V  T  T  G  G  G  S  F  L  A  T  M  I  M  *  A  T  G  P  E  N  V  L  I  K  V  S  F  I  Y  D  I  L  L  V  L  N  K  I  F  I  L  H </second_frame>
            <third_frame>   S  *  S  Q  *  F  R  F  L  F  S  L  L  L  L  *  Q  N  G  V  V  *  H  L  I  F  A  H  *  S  H  G  I  N  H  I  S  H  L  *  F  P  K  F  T  P  R  L  F  C  G  S  Q  R  C  L  R  P  S  W  S  W  A  N  V  L  G  C  F  T  T  M  P  A  P  K  L  E  L  G  Q  C  L  R  M  L  A  W  H  L  E  H  K  I  M  P  T  Q  E  L  V  I  A  T  *  F  I  L  V  H  G  R  T  L  P  R  P  V  V  I  S  R  G  G  P  P  C  N  C  G  Y  R  K  S  *  T  T  T  T  V  P  T  N  V  L  A  G  K  C  A  D  I  I  L  K  *  L  A  Q  L  S  P  T  R  L  W  S  G  S  L  *  Q  R  V  V  V  H  F  L  Q  L  *  S  C  R  Q  L  G  R  K  T  S  L  L  R  C  R  L  F  M  T  Y  C  *  Y  *  I  K  F  L  Y  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0157E03.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52188" stop="52427"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DAGLASRAQNYANSRAGNCNLIHSGAWENLAKTGGNFTGRAAVQLWVSKKLNYNYGTHQCASGQMCGHYTQVVGATQSD*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0157E03.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="51935" stop="52135"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IHNHNNLDFFSLYYSYSKMGLFNISFLLISLMVLTIFHTCDSQNSPQDYFAVHNDACAQVGVGPMS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0157E03.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52057" stop="52251"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FPKFTPRLFCGSQRCLRPSWSWANVLGCFTTMPAPKLELGQCLRMLAWHLEHKIMPTQELVIAT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="49500" e_stop="49708"/>
            <exon e_start="55118" e_stop="57306"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.962"/>
          <exon-only e_score="0.977"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.962">
            <gDNA_exon_boundary e_start="49500" e_stop="49708" e_length="209"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="49709" i_stop="55117" i_length="5409"/>
          </intron>
          <exon e_serial="2" e_score="0.977">
            <gDNA_exon_boundary e_start="55118" e_stop="57306" e_length="2189"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49500" stop="49708"/>
              <exon start="55118" stop="57306"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U314797" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CATATCAAACTATTTATGCTATATTTAATACTTATTTAAATCGTAACTATTTATTCTAAATTCAGCTCTAACACTTTTTAAAAAGTTTTTAAAATTTTCTTTCGAAGCTACAAGGATTGAGGCAGTTTCTAATTTCCACATAAAGGACCAAAAAATTGTTTTGGTTTAAGTGTCTATCACTTCCATTGTTTGTTGTTTTCATTATATCC : ATTATATCCAAATTGCTTTCAATGACTAACAAATACTTGAGTCTTCTCTCTCTCATAGAATAACTTTCTTCCAATAAATCCACGTAAGGGCGGCTCAATAAGTGTTGTTTAATATTATCTAAATAATAGAGTAAAGTATGATTATTCTTTAAAGCATATAGTATTTCCTTAATCACACGACATGCAATCTCCTTTGAATTTTCTTCACATGTGAAATAAAATTCCACAAAGTTTAAATTTAACAATTTTCACAAATTTGATTAAATTGAACAATCAAAGTTTGATAAATATCTTATCGAAACCAAAAGTGTTCACTTTTGAAAAATATAAAGGACCAAAAAAGATCACTTTTGACAATCTTAAGGACCAAAATTGCTCTTATCATACATAAGGGAGTCTATTGAAACTACTAAAAAGATAAGGAAGCCTTTTTGTCATTTCTCTATAATTTCCTTTGAATTTTCTTCATACATGCTAAACAAAATTACACAATGTTTAATTATATATACACTATTTAAAGGACCAAAAGTAATTAATTCTAAAAAGTTTTAAGGACCAAAATCACTTAGCAAAATACACAAGAGACTATTTTGAACTTACTATCAAAGATAAGAGACCATTTTTATCATTTCCTCTACTAATAATTTCCTTTGAATTTTCTTCACACATACTTAGCAAAATTCCACAATTTTTACTTATAAATACACTACTTATCTCACGTTTATAATCACAATAACTTAGATTTATTTTCTCTCCACTAAACCTAAAGAAAAATGGGGTTGTTCAACATCTCATTGTTACTCACTTGTCTCATGGTATTAGCCATATTTCACTCTTGTGAGGCCCAAAATTCACCCCAAGACTATCTTGCGGTTCATAACGATGCCCGTGCCCAAGTCGGAGTCGGGCCTATGTCTTGGGATGCCAACTTGGCATCCCGAGCACAAAACTATGCCAACTCAAGAGCTGGTGATTGTAACTTGATTCATTCTGGTGCTGGGGAGAATCTTGCCAAGGGTGGTGGTGACTTCACGGGGAGGGCAGCCGTGCAATTGTGGGTGTCCGAGAGGCCAAGCTATAACTACGCTACCAACCAATGTGTTGGTGGAAAAAAGTGTAGACATTATACTCAAGTAGTCTGGCGCAACTCAGTCCGACTAGGTTGTGGTCGGGCACGTTGCAACAACGGATGGTGGTTCATTTCTTGCAACTATGATCCTGTAGGCAACTGGATCGGACAACGTCCTTACTAAAATGATGTATACTTATGACATGTTGCTAGTATTAAATAAAATTCTCATATGAGACGTCGAGAAGTTAAAATTTAAGTTTGACATATGAATCAAGTCAAACTCCTATCTAAAATATTAAGGGATTAAATATTGAACATCTATAATTATTATTATTTCCCTTTTGATGTTGCTAATATGAATAATTCCACATACCATATGTTCATAATGGGCTTAAGTTGATTATTAAGTACTGCATCTTCTTGTTTCCATAAAACATTAATATACATAAAATTTTAATTAAGCATGGCATATATTAATTAGGCACATCAAGCACTTATCTAAACACGTAACTATTTATTCATAAATTCAGTTTCAACCATTCAAAATATTTGTTCTATTTTAAGTGCCCATCAAAAAAAAATTCAATCATTACCCAATTTTTTTTCAATGACTAACAAATACTCAAGTCTTCCATATTCTCTCATACAATAATGGCCTAAAACTATATTTTCATAAAATATTTTATAGGTGAAAATTGAATTTCATCCTTTCTTGACCTATTGTCTTAGATTTGAATACCAGAAATAAAAACAAATATTGCTATTTATTGAAAAAATTTACGTAGCATGAAATTAAATAAATTGGCACATATTTAAAATATCTCGTCAGGAAAAAAAAATTGTACCCCTAACAAACGTTTAAATTTAATAATTTTCACAAATGTTACTAAATTTAACAATGAGAGTTTGATAAATATCTAATCGTGAACAGAAAGTGTTCACTTTCGAAAAACAAAGAGGACCAAAAGTGATCTATTTTGACAAATTTAAGGATCAAAATTGATCCAATCATACATTAGGGACTATTTTGAATCTACTATAAAAATGATAAGGAACCATTTTTTTGTTTTTTCATTTTCTCTATTAAGTTTCTTTGAATTTTCTTCACACATGCTAA</gDNA_template>
            <first_frame> H  I  K  L  F  M  L  Y  L  I  L  I  *  I  V  T  I  Y  S  K  F  S  S  N  T  F  *  K  V  F  K  I  F  F  R  S  Y  K  D  *  G  S  F  *  F  P  H  K  G  P  K  N  C  F  G  L  S  V  Y  H  F  H  C  L  L  F  S  L  Y  P :   L  Y  P  N  C  F  Q  *  L  T  N  T  *  V  F  S  L  S  *  N  N  F  L  P  I  N  P  R  K  G  G  S  I  S  V  V  *  Y  Y  L  N  N  R  V  K  Y  D  Y  S  L  K  H  I  V  F  P  *  S  H  D  M  Q  S  P  L  N  F  L  H  M  *  N  K  I  P  Q  S  L  N  L  T  I  F  T  N  L  I  K  L  N  N  Q  S  L  I  N  I  L  S  K  P  K  V  F  T  F  E  K  Y  K  G  P  K  K  I  T  F  D  N  L  K  D  Q  N  C  S  Y  H  T  *  G  S  L  L  K  L  L  K  R  *  G  S  L  F  V  I  S  L  *  F  P  L  N  F  L  H  T  C  *  T  K  L  H  N  V  *  L  Y  I  H  Y  L  K  D  Q  K  *  L  I  L  K  S  F  K  D  Q  N  H  L  A  K  Y  T  R  D  Y  F  E  L  T  I  K  D  K  R  P  F  L  S  F  P  L  L  I  I  S  F  E  F  S  S  H  I  L  S  K  I  P  Q  F  L  L  I  N  T  L  L  I  S  R  L  *  S  Q  *  L  R  F  I  F  S  P  L  N  L  K  K  N  G  V  V  Q  H  L  I  V  T  H  L  S  H  G  I  S  H  I  S  L  L  *  G  P  K  F  T  P  R  L  S  C  G  S  *  R  C  P  C  P  S  R  S  R  A  Y  V  L  G  C  Q  L  G  I  P  S  T  K  L  C  Q  L  K  S  W  *  L  *  L  D  S  F  W  C  W  G  E  S  C  Q  G  W  W  *  L  H  G  E  G  S  R  A  I  V  G  V  R  E  A  K  L  *  L  R  Y  Q  P  M  C  W  W  K  K  V  *  T  L  Y  S  S  S  L  A  Q  L  S  P  T  R  L  W  S  G  T  L  Q  Q  R  M  V  V  H  F  L  Q  L  *  S  C  R  Q  L  D  R  T  T  S  L  L  K  *  C  I  L  M  T  C  C  *  Y  *  I  K  F  S  Y  E  T  S  R  S  *  N  L  S  L  T  Y  E  S  S  Q  T  P  I  *  N  I  K  G  L  N  I  E  H  L  *  L  L  L  F  P  F  *  C  C  *  Y  E  *  F  H  I  P  Y  V  H  N  G  L  K  L  I  I  K  Y  C  I  F  L  F  P  *  N  I  N  I  H  K  I  L  I  K  H  G  I  Y  *  L  G  T  S  S  T  Y  L  N  T  *  L  F  I  H  K  F  S  F  N  H  S  K  Y  L  F  Y  F  K  C  P  S  K  K  N  S  I  I  T  Q  F  F  F  N  D  *  Q  I  L  K  S  S  I  F  S  H  T  I  M  A  *  N  Y  I  F  I  K  Y  F  I  G  E  N  *  I  S  S  F  L  D  L  L  S  *  I  *  I  P  E  I  K  T  N  I  A  I  Y  *  K  N  L  R  S  M  K  L  N  K  L  A  H  I  *  N  I  S  S  G  K  K  N  C  T  P  N  K  R  L  N  L  I  I  F  T  N  V  T  K  F  N  N  E  S  L  I  N  I  *  S  *  T  E  S  V  H  F  R  K  T  K  R  T  K  S  D  L  F  *  Q  I  *  G  S  K  L  I  Q  S  Y  I  R  D  Y  F  E  S  T  I  K  M  I  R  N  H  F  F  V  F  S  F  S  L  L  S  F  F  E  F  S  S  H  M  L  </first_frame>
            <second_frame>  I  S  N  Y  L  C  Y  I  *  Y  L  F  K  S  *  L  F  I  L  N  S  A  L  T  L  F  K  K  F  L  K  F  S  F  E  A  T  R  I  E  A  V  S  N  F  H  I  K  D  Q  K  I  V  L  V  *  V  S  I  T  S  I  V  C  C  F  H  Y  I   : H  Y  I  Q  I  A  F  N  D  *  Q  I  L  E  S  S  L  S  H  R  I  T  F  F  Q  *  I  H  V  R  A  A  Q  *  V  L  F  N  I  I  *  I  I  E  *  S  M  I  I  L  *  S  I  *  Y  F  L  N  H  T  T  C  N  L  L  *  I  F  F  T  C  E  I  K  F  H  K  V  *  I  *  Q  F  S  Q  I  *  L  N  *  T  I  K  V  *  *  I  S  Y  R  N  Q  K  C  S  L  L  K  N  I  K  D  Q  K  R  S  L  L  T  I  L  R  T  K  I  A  L  I  I  H  K  G  V  Y  *  N  Y  *  K  D  K  E  A  F  L  S  F  L  Y  N  F  L  *  I  F  F  I  H  A  K  Q  N  Y  T  M  F  N  Y  I  Y  T  I  *  R  T  K  S  N  *  F  *  K  V  L  R  T  K  I  T  *  Q  N  T  Q  E  T  I  L  N  L  L  S  K  I  R  D  H  F  Y  H  F  L  Y  *  *  F  P  L  N  F  L  H  T  Y  L  A  K  F  H  N  F  Y  L  *  I  H  Y  L  S  H  V  Y  N  H  N  N  L  D  L  F  S  L  H  *  T  *  R  K  M  G  L  F  N  I  S  L  L  L  T  C  L  M  V  L  A  I  F  H  S  C  E  A  Q  N  S  P  Q  D  Y  L  A  V  H  N  D  A  R  A  Q  V  G  V  G  P  M  S  W  D  A  N  L  A  S  R  A  Q  N  Y  A  N  S  R  A  G  D  C  N  L  I  H  S  G  A  G  E  N  L  A  K  G  G  G  D  F  T  G  R  A  A  V  Q  L  W  V  S  E  R  P  S  Y  N  Y  A  T  N  Q  C  V  G  G  K  K  C  R  H  Y  T  Q  V  V  W  R  N  S  V  R  L  G  C  G  R  A  R  C  N  N  G  W  W  F  I  S  C  N  Y  D  P  V  G  N  W  I  G  Q  R  P  Y  *  N  D  V  Y  L  *  H  V  A  S  I  K  *  N  S  H  M  R  R  R  E  V  K  I  *  V  *  H  M  N  Q  V  K  L  L  S  K  I  L  R  D  *  I  L  N  I  Y  N  Y  Y  Y  F  P  F  D  V  A  N  M  N  N  S  T  Y  H  M  F  I  M  G  L  S  *  L  L  S  T  A  S  S  C  F  H  K  T  L  I  Y  I  K  F  *  L  S  M  A  Y  I  N  *  A  H  Q  A  L  I  *  T  R  N  Y  L  F  I  N  S  V  S  T  I  Q  N  I  C  S  I  L  S  A  H  Q  K  K  I  Q  S  L  P  N  F  F  S  M  T  N  K  Y  S  S  L  P  Y  S  L  I  Q  *  W  P  K  T  I  F  S  *  N  I  L  *  V  K  I  E  F  H  P  F  L  T  Y  C  L  R  F  E  Y  Q  K  *  K  Q  I  L  L  F  I  E  K  I  Y  V  A  *  N  *  I  N  W  H  I  F  K  I  S  R  Q  E  K  K  I  V  P  L  T  N  V  *  I  *  *  F  S  Q  M  L  L  N  L  T  M  R  V  *  *  I  S  N  R  E  Q  K  V  F  T  F  E  K  Q  R  G  P  K  V  I  Y  F  D  K  F  K  D  Q  N  *  S  N  H  T  L  G  T  I  L  N  L  L  *  K  *  *  G  T  I  F  L  F  F  H  F  L  Y  *  V  S  L  N  F  L  H  T  C  * </second_frame>
            <third_frame>   Y  Q  T  I  Y  A  I  F  N  T  Y  L  N  R  N  Y  L  F  *  I  Q  L  *  H  F  L  K  S  F  *  N  F  L  S  K  L  Q  G  L  R  Q  F  L  I  S  T  *  R  T  K  K  L  F  W  F  K  C  L  S  L  P  L  F  V  V  F  I  I  S  :  I  I  S  K  L  L  S  M  T  N  K  Y  L  S  L  L  S  L  I  E  *  L  S  S  N  K  S  T  *  G  R  L  N  K  C  C  L  I  L  S  K  *  *  S  K  V  *  L  F  F  K  A  Y  S  I  S  L  I  T  R  H  A  I  S  F  E  F  S  S  H  V  K  *  N  S  T  K  F  K  F  N  N  F  H  K  F  D  *  I  E  Q  S  K  F  D  K  Y  L  I  E  T  K  S  V  H  F  *  K  I  *  R  T  K  K  D  H  F  *  Q  S  *  G  P  K  L  L  L  S  Y  I  R  E  S  I  E  T  T  K  K  I  R  K  P  F  C  H  F  S  I  I  S  F  E  F  S  S  Y  M  L  N  K  I  T  Q  C  L  I  I  Y  T  L  F  K  G  P  K  V  I  N  S  K  K  F  *  G  P  K  S  L  S  K  I  H  K  R  L  F  *  T  Y  Y  Q  R  *  E  T  I  F  I  I  S  S  T  N  N  F  L  *  I  F  F  T  H  T  *  Q  N  S  T  I  F  T  Y  K  Y  T  T  Y  L  T  F  I  I  T  I  T  *  I  Y  F  L  S  T  K  P  K  E  K  W  G  C  S  T  S  H  C  Y  S  L  V  S  W  Y  *  P  Y  F  T  L  V  R  P  K  I  H  P  K  T  I  L  R  F  I  T  M  P  V  P  K  S  E  S  G  L  C  L  G  M  P  T  W  H  P  E  H  K  T  M  P  T  Q  E  L  V  I  V  T  *  F  I  L  V  L  G  R  I  L  P  R  V  V  V  T  S  R  G  G  Q  P  C  N  C  G  C  P  R  G  Q  A  I  T  T  L  P  T  N  V  L  V  E  K  S  V  D  I  I  L  K  *  S  G  A  T  Q  S  D  *  V  V  V  G  H  V  A  T  T  D  G  G  S  F  L  A  T  M  I  L  *  A  T  G  S  D  N  V  L  T  K  M  M  Y  T  Y  D  M  L  L  V  L  N  K  I  L  I  *  D  V  E  K  L  K  F  K  F  D  I  *  I  K  S  N  S  Y  L  K  Y  *  G  I  K  Y  *  T  S  I  I  I  I  I  S  L  L  M  L  L  I  *  I  I  P  H  T  I  C  S  *  W  A  *  V  D  Y  *  V  L  H  L  L  V  S  I  K  H  *  Y  T  *  N  F  N  *  A  W  H  I  L  I  R  H  I  K  H  L  S  K  H  V  T  I  Y  S  *  I  Q  F  Q  P  F  K  I  F  V  L  F  *  V  P  I  K  K  K  F  N  H  Y  P  I  F  F  Q  *  L  T  N  T  Q  V  F  H  I  L  S  Y  N  N  G  L  K  L  Y  F  H  K  I  F  Y  R  *  K  L  N  F  I  L  S  *  P  I  V  L  D  L  N  T  R  N  K  N  K  Y  C  Y  L  L  K  K  F  T  *  H  E  I  K  *  I  G  T  Y  L  K  Y  L  V  R  K  K  K  L  Y  P  *  Q  T  F  K  F  N  N  F  H  K  C  Y  *  I  *  Q  *  E  F  D  K  Y  L  I  V  N  R  K  C  S  L  S  K  N  K  E  D  Q  K  *  S  I  L  T  N  L  R  I  K  I  D  P  I  I  H  *  G  L  F  *  I  Y  Y  K  N  D  K  E  P  F  F  C  F  F  I  F  S  I  K  F  L  *  I  F  F  T  H  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0157E03.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55885" stop="56370"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>483</number_coding_nucleotides>
                  <number_encoded_amino_acids>161</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RKMGLFNISLLLTCLMVLAIFHSCEAQNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGAGENLAKGGGDFTGRAAVQLWVSERPSYNYATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNGWWFISCNYDPVGNWIGQRPY*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0157E03.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55650" stop="55844"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LILKSFKDQNHLAKYTRDYFELTIKDKRPFLSFPLLIISFEFSSHILSKIPQFLLINTLLISRL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="45417" e_stop="45721"/>
            <exon e_start="50924" e_stop="51095"/>
            <exon e_start="51514" e_stop="51526"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.729" acc_prob="0.639" e_score="0.941"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.860"/>
          <exon-only e_score="0.846"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.941">
            <gDNA_exon_boundary e_start="45417" e_stop="45721" e_length="305"/>
          </exon>
          <intron i_serial="1" don_prob="0.729" acc_prob="0.639">
            <gDNA_intron_boundary i_start="45722" i_stop="50923" i_length="5202"/>
          </intron>
          <exon e_serial="2" e_score="0.860">
            <gDNA_exon_boundary e_start="50924" e_stop="51095" e_length="172"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="51096" i_stop="51513" i_length="418"/>
          </intron>
          <exon e_serial="3" e_score="0.846">
            <gDNA_exon_boundary e_start="51514" e_stop="51526" e_length="13"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45417" stop="45721"/>
              <exon start="50924" stop="51095"/>
              <exon start="51514" stop="51526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U339053" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGATGATGCCTTGGCAACCAAAGCACAAAGGTATGCTGACTCAAGAAGAGGTGATTGCAACTTGATTCATTCTGGTCCAGGGGAGAATCTTGCCAAGGGTAGTGGAGATTTCACAGGGAGGCGTGCCTCTGAATTGTGGGTGGCGGAGAAGCCAAACTACAACTATGGTACCAACCAATGTGCTAGTGGGAAAGTGTGCGGACACTATACTCAAGTAGTTTGGCGTACCTCGATCAGGCTAGGTTGTGGTCGGGCTCGTTGTAACAACGGGTGGTGGTTCATTTGTTGCAACTATGCTCCTTTTG : GCAACTGGATCGGACAACGTCCTTACTAAAATGATGTATACTTATGACATGTTGCTAGTATTAAATAAAATTCTCATATGAGACGTCGAGAAGTTAAAATTTAAGTTTGACATATGAATCAAGTCAAACTCCTATCTAAAATATTAAGGGATTAAATATTGAACATCTATAA : AAATAAAAACAAA</gDNA_template>
            <first_frame> G  *  C  L  G  N  Q  S  T  K  V  C  *  L  K  K  R  *  L  Q  L  D  S  F  W  S  R  G  E  S  C  Q  G  *  W  R  F  H  R  E  A  C  L  *  I  V  G  G  G  E  A  K  L  Q  L  W  Y  Q  P  M  C  *  W  E  S  V  R  T  L  Y  S  S  S  L  A  Y  L  D  Q  A  R  L  W  S  G  S  L  *  Q  R  V  V  V  H  L  L  Q  L  C  S  F  W :   Q  L  D  R  T  T  S  L  L  K  *  C  I  L  M  T  C  C  *  Y  *  I  K  F  S  Y  E  T  S  R  S  *  N  L  S  L  T  Y  E  S  S  Q  T  P  I  *  N  I  K  G  L  N  I  E  H  L  *  :  K  *  K  Q  </first_frame>
            <second_frame>  D  D  A  L  A  T  K  A  Q  R  Y  A  D  S  R  R  G  D  C  N  L  I  H  S  G  P  G  E  N  L  A  K  G  S  G  D  F  T  G  R  R  A  S  E  L  W  V  A  E  K  P  N  Y  N  Y  G  T  N  Q  C  A  S  G  K  V  C  G  H  Y  T  Q  V  V  W  R  T  S  I  R  L  G  C  G  R  A  R  C  N  N  G  W  W  F  I  C  C  N  Y  A  P  F   : G  N  W  I  G  Q  R  P  Y  *  N  D  V  Y  L  *  H  V  A  S  I  K  *  N  S  H  M  R  R  R  E  V  K  I  *  V  *  H  M  N  Q  V  K  L  L  S  K  I  L  R  D  *  I  L  N  I  Y  K :   N  K  N  K </second_frame>
            <third_frame>   M  M  P  W  Q  P  K  H  K  G  M  L  T  Q  E  E  V  I  A  T  *  F  I  L  V  Q  G  R  I  L  P  R  V  V  E  I  S  Q  G  G  V  P  L  N  C  G  W  R  R  S  Q  T  T  T  M  V  P  T  N  V  L  V  G  K  C  A  D  T  I  L  K  *  F  G  V  P  R  S  G  *  V  V  V  G  L  V  V  T  T  G  G  G  S  F  V  A  T  M  L  L  L  :  A  T  G  S  D  N  V  L  T  K  M  M  Y  T  Y  D  M  L  L  V  L  N  K  I  L  I  *  D  V  E  K  L  K  F  K  F  D  I  *  I  K  S  N  S  Y  L  K  Y  *  G  I  K  Y  *  T  S  I   : K  I  K  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0157E03.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="45418" stop="45721"/>
                    <exon start="50924" stop="50952"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>330</number_coding_nucleotides>
                  <number_encoded_amino_acids>110</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DDALATKAQRYADSRRGDCNLIHSGPGENLAKGSGDFTGRRASELWVAEKPNYNYGTNQCASGKVCGHYTQVVWRTSIRLGCGRARCNNGWWFICCNYAPFGNWIGQRPY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="57353" PGL_stop="57992"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="57353" e_stop="57992"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.981">
            <gDNA_exon_boundary e_start="57353" e_stop="57992" e_length="640"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57353" stop="57992"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U339131" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTCATAATCACAATAATTTAGATTTCTTTTCTCTCTACTACTCCTATAGCAAAATGGGGTTGTTTAACATCTCATTTTTGCTCATTAGTCTCATGGTATTAACCATATTTCACACTTGTGATTCCCAAAATTCACCCCAAGACTATTTTGCGGTTCACAACGATGCCTGCGCCCAAGTTGGAGTTGGGCCAATGTCTTAGGATGCTTCACAACGATGCCCGCGCCCAAGTTGGAATTGGGCCAATGTCTTAGGATGCTGGCTTGGCATCTCGAGCACAAAATTATGCCAACTCAAGAGCTGGTAATTGCAACTTGATTCATTCTGGTGCATGGGAGAACCTTGCCAAGACCGGTGGTAATTTCACGGGGAGGGCCGCCGTGCAATTGTGGGTATCGAAAAAGCTAAACTACAACTACGGTACCCACCAATGTGCTAGCGGGCAAATGTGCGGACATTATACTCAAGTAGTTGGCGCAACTCAGTCCGACTAGGTTGTGGTCGGGTTCGTTGTAACAACGGGTGGTGGTTCATTTCTTGCAACTATGATCATGTAGGCAACTGGGCCGGAAAACGTCCTTATTAAGGTGTCGTTTATTTATGACATATTGCTAGTATTAAATAAAATTTTTATATTACAT</gDNA_template>
            <first_frame> I  H  N  H  N  N  L  D  F  F  S  L  Y  Y  S  Y  S  K  M  G  L  F  N  I  S  F  L  L  I  S  L  M  V  L  T  I  F  H  T  C  D  S  Q  N  S  P  Q  D  Y  F  A  V  H  N  D  A  C  A  Q  V  G  V  G  P  M  S  *  D  A  S  Q  R  C  P  R  P  S  W  N  W  A  N  V  L  G  C  W  L  G  I  S  S  T  K  L  C  Q  L  K  S  W  *  L  Q  L  D  S  F  W  C  M  G  E  P  C  Q  D  R  W  *  F  H  G  E  G  R  R  A  I  V  G  I  E  K  A  K  L  Q  L  R  Y  P  P  M  C  *  R  A  N  V  R  T  L  Y  S  S  S  W  R  N  S  V  R  L  G  C  G  R  V  R  C  N  N  G  W  W  F  I  S  C  N  Y  D  H  V  G  N  W  A  G  K  R  P  Y  *  G  V  V  Y  L  *  H  I  A  S  I  K  *  N  F  Y  I  T  </first_frame>
            <second_frame>  F  I  I  T  I  I  *  I  S  F  L  S  T  T  P  I  A  K  W  G  C  L  T  S  H  F  C  S  L  V  S  W  Y  *  P  Y  F  T  L  V  I  P  K  I  H  P  K  T  I  L  R  F  T  T  M  P  A  P  K  L  E  L  G  Q  C  L  R  M  L  H  N  D  A  R  A  Q  V  G  I  G  P  M  S  *  D  A  G  L  A  S  R  A  Q  N  Y  A  N  S  R  A  G  N  C  N  L  I  H  S  G  A  W  E  N  L  A  K  T  G  G  N  F  T  G  R  A  A  V  Q  L  W  V  S  K  K  L  N  Y  N  Y  G  T  H  Q  C  A  S  G  Q  M  C  G  H  Y  T  Q  V  V  G  A  T  Q  S  D  *  V  V  V  G  F  V  V  T  T  G  G  G  S  F  L  A  T  M  I  M  *  A  T  G  P  E  N  V  L  I  K  V  S  F  I  Y  D  I  L  L  V  L  N  K  I  F  I  L  H </second_frame>
            <third_frame>   S  *  S  Q  *  F  R  F  L  F  S  L  L  L  L  *  Q  N  G  V  V  *  H  L  I  F  A  H  *  S  H  G  I  N  H  I  S  H  L  *  F  P  K  F  T  P  R  L  F  C  G  S  Q  R  C  L  R  P  S  W  S  W  A  N  V  L  G  C  F  T  T  M  P  A  P  K  L  E  L  G  Q  C  L  R  M  L  A  W  H  L  E  H  K  I  M  P  T  Q  E  L  V  I  A  T  *  F  I  L  V  H  G  R  T  L  P  R  P  V  V  I  S  R  G  G  P  P  C  N  C  G  Y  R  K  S  *  T  T  T  T  V  P  T  N  V  L  A  G  K  C  A  D  I  I  L  K  *  L  A  Q  L  S  P  T  R  L  W  S  G  S  L  *  Q  R  V  V  V  H  F  L  Q  L  *  S  C  R  Q  L  G  R  K  T  S  L  L  R  C  R  L  F  M  T  Y  C  *  Y  *  I  K  F  L  Y  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0157E03.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57606" stop="57845"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DAGLASRAQNYANSRAGNCNLIHSGAWENLAKTGGNFTGRAAVQLWVSKKLNYNYGTHQCASGQMCGHYTQVVGATQSD*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0157E03.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57353" stop="57553"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IHNHNNLDFFSLYYSYSKMGLFNISFLLISLMVLTIFHTCDSQNSPQDYFAVHNDACAQVGVGPMS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0157E03.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57475" stop="57669"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FPKFTPRLFCGSQRCLRPSWSWANVLGCFTTMPAPKLELGQCLRMLAWHLEHKIMPTQELVIAT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="65488" PGL_stop="64849"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="65488" e_stop="64849"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.981">
            <gDNA_exon_boundary e_start="65488" e_stop="64849" e_length="640"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65488" stop="64849"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U339131" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTCATAATCACAATAATTTAGATTTCTTTTCTCTCTACTACTCCTATAGCAAAATGGGGTTGTTTAACATCTCATTTTTGCTCATTAGTCTCATGGTATTAACCATATTTCACACTTGTGATTCCCAAAATTCACCCCAAGACTATTTTGCGGTTCACAACGATGCCTGCGCCCAAGTTGGAGTTGGGCCAATGTCTTAGGATGCTTCACAACGATGCCCGCGCCCAAGTTGGAATTGGGCCAATGTCTTAGGATGCTGGCTTGGCATCTCGAGCACAAAATTATGCCAACTCAAGAGCTGGTAATTGCAACTTGATTCATTCTGGTGCATGGGAGAACCTTGCCAAGACCGGTGGTAATTTCACGGGGAGGGCCGCCGTGCAATTGTGGGTATCGAAAAAGCTAAACTACAACTACGGTACCCACCAATGTGCTAGCGGGCAAATGTGCGGACATTATACTCAAGTAGTTGGCGCAACTCAGTCCGACTAGGTTGTGGTCGGGTTCGTTGTAACAACGGGTGGTGGTTCATTTCTTGCAACTATGATCATGTAGGCAACTGGGCCGGAAAACGTCCTTATTAAGGTGTCGTTTATTTATGACATATTGCTAGTATTAAATAAAATTTTTATATTACAT</gDNA_template>
            <first_frame> I  H  N  H  N  N  L  D  F  F  S  L  Y  Y  S  Y  S  K  M  G  L  F  N  I  S  F  L  L  I  S  L  M  V  L  T  I  F  H  T  C  D  S  Q  N  S  P  Q  D  Y  F  A  V  H  N  D  A  C  A  Q  V  G  V  G  P  M  S  *  D  A  S  Q  R  C  P  R  P  S  W  N  W  A  N  V  L  G  C  W  L  G  I  S  S  T  K  L  C  Q  L  K  S  W  *  L  Q  L  D  S  F  W  C  M  G  E  P  C  Q  D  R  W  *  F  H  G  E  G  R  R  A  I  V  G  I  E  K  A  K  L  Q  L  R  Y  P  P  M  C  *  R  A  N  V  R  T  L  Y  S  S  S  W  R  N  S  V  R  L  G  C  G  R  V  R  C  N  N  G  W  W  F  I  S  C  N  Y  D  H  V  G  N  W  A  G  K  R  P  Y  *  G  V  V  Y  L  *  H  I  A  S  I  K  *  N  F  Y  I  T  </first_frame>
            <second_frame>  F  I  I  T  I  I  *  I  S  F  L  S  T  T  P  I  A  K  W  G  C  L  T  S  H  F  C  S  L  V  S  W  Y  *  P  Y  F  T  L  V  I  P  K  I  H  P  K  T  I  L  R  F  T  T  M  P  A  P  K  L  E  L  G  Q  C  L  R  M  L  H  N  D  A  R  A  Q  V  G  I  G  P  M  S  *  D  A  G  L  A  S  R  A  Q  N  Y  A  N  S  R  A  G  N  C  N  L  I  H  S  G  A  W  E  N  L  A  K  T  G  G  N  F  T  G  R  A  A  V  Q  L  W  V  S  K  K  L  N  Y  N  Y  G  T  H  Q  C  A  S  G  Q  M  C  G  H  Y  T  Q  V  V  G  A  T  Q  S  D  *  V  V  V  G  F  V  V  T  T  G  G  G  S  F  L  A  T  M  I  M  *  A  T  G  P  E  N  V  L  I  K  V  S  F  I  Y  D  I  L  L  V  L  N  K  I  F  I  L  H </second_frame>
            <third_frame>   S  *  S  Q  *  F  R  F  L  F  S  L  L  L  L  *  Q  N  G  V  V  *  H  L  I  F  A  H  *  S  H  G  I  N  H  I  S  H  L  *  F  P  K  F  T  P  R  L  F  C  G  S  Q  R  C  L  R  P  S  W  S  W  A  N  V  L  G  C  F  T  T  M  P  A  P  K  L  E  L  G  Q  C  L  R  M  L  A  W  H  L  E  H  K  I  M  P  T  Q  E  L  V  I  A  T  *  F  I  L  V  H  G  R  T  L  P  R  P  V  V  I  S  R  G  G  P  P  C  N  C  G  Y  R  K  S  *  T  T  T  T  V  P  T  N  V  L  A  G  K  C  A  D  I  I  L  K  *  L  A  Q  L  S  P  T  R  L  W  S  G  S  L  *  Q  R  V  V  V  H  F  L  Q  L  *  S  C  R  Q  L  G  R  K  T  S  L  L  R  C  R  L  F  M  T  Y  C  *  Y  *  I  K  F  L  Y  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0157E03.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="65235" stop="64996"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DAGLASRAQNYANSRAGNCNLIHSGAWENLAKTGGNFTGRAAVQLWVSKKLNYNYGTHQCASGQMCGHYTQVVGATQSD*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0157E03.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="65488" stop="65288"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IHNHNNLDFFSLYYSYSKMGLFNISFLLISLMVLTIFHTCDSQNSPQDYFAVHNDACAQVGVGPMS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0157E03.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="65366" stop="65172"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FPKFTPRLFCGSQRCLRPSWSWANVLGCFTTMPAPKLELGQCLRMLAWHLEHKIMPTQELVIAT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="67923" PGL_stop="65535"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="67923" e_stop="65535"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.968"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.968">
            <gDNA_exon_boundary e_start="67923" e_stop="65535" e_length="2389"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67923" stop="65535"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U314797" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CATATCAAACTATTTATGCTATATTTAATACTTATTTAAATCGTAACTATTTATTCTAAATTCAGCTCTAACACTTTTTAAAAAGTTTTTAAAATTTTCTTTCGAAGCTACAAGGATTGAGGCAGTTTCTAATTTCCACATAAAGGACCAAAAAATTGTTTTGGTTTAAGTGTCTATCACTTCCATTGTTTGTTGTTTTCATTATATCCAAATTGCTTTCAATGACTAACAAATACTTGAGTCTTCTCTCTCTCATAGAATAACTTTCTTCCAATAAATCCACGTAAGGGCGGCTCAATAAGTGTTGTTTAATATTATCTAAATAATAGAGTAAAGTATGATTATTCTTTAAAGCATATAGTATTTCCTTAATCACACGACATGCAATCTCCTTTGAATTTTCTTCACATGTGAAATAAAATTCCACAAAGTTTAAATTTAACAATTTTCACAAATTTGATTAAATTGAACAATCAAAGTTTGATAAATATCTTATCGAAACCAAAAGTGTTCACTTTTGAAAAATATAAAGGACCAAAAAAGATCACTTTTGACAATCTTAAGGACCAAAATTGCTCTTATCATACATAAGGGAGTCTATTGAAACTACTAAAAAGATAAGGAAGCCTTTTTGTCATTTCTCTATAATTTCCTTTGAATTTTCTTCATACATGCTAAACAAAATTACACAATGTTTAATTATATATACACTATTTAAAGGACCAAAAGTAATTAATTCTAAAAAGTTTTAAGGACCAAAATCACTTAGCAAAATACACAAGAGACTATTTTGAACTTACTATCAAAGATAAGAGACCATTTTTATCATTTCCTCTACTAATAATTTCCTTTGAATTTTCTTCACACATACTTAGCAAAATTCCACAATTTTTACTTATAAATACACTACTTATCTCACGTTTATAATCACAATAACTTAGATTTATTTTCTCTCCACTAAACCTAAAGAAAAATGGGGTTGTTCAACATCTCATTGTTACTCACTTGTCTCATGGTATTAGCCATATTTCACTCTTGTGAGGCCCAAAATTCACCCCAAGACTATCTTGCGGTTCATAACGATGCCCGTGCCCAAGTCGGAGTCGGGCCTATGTCTTGGGATGCCAACTTGGCATCCCGAGCACAAAACTATGCCAACTCAAGAGCTGGTGATTGTAACTTGATTCATTCTGGTGCTGGGGAGAATCTTGCCAAGGGTGGTGGTGACTTCACGGGGAGGGCAGCCGTGCAATTGTGGGTGTCCGAGAGGCCAAGCTATAACTACGCTACCAACCAATGTGTTGGTGGAAAAAAGTGTAGACATTATACTCAAGTAGTCTGGCGCAACTCAGTCCGACTAGGTTGTGGTCGGGCACGTTGCAACAACGGATGGTGGTTCATTTCTTGCAACTATGATCCTGTAGGCAACTGGATCGGACAACGTCCTTACTAAAATGATGTATACTTATGACATGTTGCTAGTATTAAATAAAATTCTCATATGAGACGTCGAGAAGTTAAAATTTAAGTTTGACATATGAATCAAGTCAAACTCCTATCTAAAATATTAAGGGATTAAATATTGAACATCTATAATTATTATTATTTCCCTTTTGATGTTGCTAATATGAATAATTCCACATACCATATGTTCATAATGGGCTTAAGTTGATTATTAAGTACTGCATCTTCTTGTTTCCATAAAACATTAATATACATAAAATTTTAATTAAGCATGGCATATATTAATTAGGCACATCAAGCACTTATCTAAACACGTAACTATTTATTCATAAATTCAGTTTCAACCATTCAAAATATTTGTTCTATTTTAAGTGCCCATCAAAAAAAAATTCAATCATTACCCAATTTTTTTTCAATGACTAACAAATACTCAAGTCTTCCATATTCTCTCATACAATAATGGCCTAAAACTATATTTTCATAAAATATTTTATAGGTGAAAATTGAATTTCATCCTTTCTTGACCTATTGTCTTAGATTTGAATACCAGAAATAAAAACAAATATTGCTATTTATTGAAAAAATTTACGTAGCATGAAATTAAATAAATTGGCACATATTTAAAATATCTCGTCAGGAAAAAAAAATTGTACCCCTAACAAACGTTTAAATTTAATAATTTTCACAAATGTTACTAAATTTAACAATGAGAGTTTGATAAATATCTAATCGTGAACAGAAAGTGTTCACTTTCGAAAAACAAAGAGGACCAAAAGTGATCTATTTTGACAAATTTAAGGATCAAAATTGATCCAATCATACATTAGGGACTATTTTGAATCTACTATAAAAATGATAAGGAACCATTTTTTTGTTTTTTCATTTTCTCTATTAAGTTTCTTTGAATTTTCTTCACACATGCTAA</gDNA_template>
            <first_frame> H  I  K  L  F  M  L  Y  L  I  L  I  *  I  V  T  I  Y  S  K  F  S  S  N  T  F  *  K  V  F  K  I  F  F  R  S  Y  K  D  *  G  S  F  *  F  P  H  K  G  P  K  N  C  F  G  L  S  V  Y  H  F  H  C  L  L  F  S  L  Y  P  N  C  F  Q  *  L  T  N  T  *  V  F  S  L  S  *  N  N  F  L  P  I  N  P  R  K  G  G  S  I  S  V  V  *  Y  Y  L  N  N  R  V  K  Y  D  Y  S  L  K  H  I  V  F  P  *  S  H  D  M  Q  S  P  L  N  F  L  H  M  *  N  K  I  P  Q  S  L  N  L  T  I  F  T  N  L  I  K  L  N  N  Q  S  L  I  N  I  L  S  K  P  K  V  F  T  F  E  K  Y  K  G  P  K  K  I  T  F  D  N  L  K  D  Q  N  C  S  Y  H  T  *  G  S  L  L  K  L  L  K  R  *  G  S  L  F  V  I  S  L  *  F  P  L  N  F  L  H  T  C  *  T  K  L  H  N  V  *  L  Y  I  H  Y  L  K  D  Q  K  *  L  I  L  K  S  F  K  D  Q  N  H  L  A  K  Y  T  R  D  Y  F  E  L  T  I  K  D  K  R  P  F  L  S  F  P  L  L  I  I  S  F  E  F  S  S  H  I  L  S  K  I  P  Q  F  L  L  I  N  T  L  L  I  S  R  L  *  S  Q  *  L  R  F  I  F  S  P  L  N  L  K  K  N  G  V  V  Q  H  L  I  V  T  H  L  S  H  G  I  S  H  I  S  L  L  *  G  P  K  F  T  P  R  L  S  C  G  S  *  R  C  P  C  P  S  R  S  R  A  Y  V  L  G  C  Q  L  G  I  P  S  T  K  L  C  Q  L  K  S  W  *  L  *  L  D  S  F  W  C  W  G  E  S  C  Q  G  W  W  *  L  H  G  E  G  S  R  A  I  V  G  V  R  E  A  K  L  *  L  R  Y  Q  P  M  C  W  W  K  K  V  *  T  L  Y  S  S  S  L  A  Q  L  S  P  T  R  L  W  S  G  T  L  Q  Q  R  M  V  V  H  F  L  Q  L  *  S  C  R  Q  L  D  R  T  T  S  L  L  K  *  C  I  L  M  T  C  C  *  Y  *  I  K  F  S  Y  E  T  S  R  S  *  N  L  S  L  T  Y  E  S  S  Q  T  P  I  *  N  I  K  G  L  N  I  E  H  L  *  L  L  L  F  P  F  *  C  C  *  Y  E  *  F  H  I  P  Y  V  H  N  G  L  K  L  I  I  K  Y  C  I  F  L  F  P  *  N  I  N  I  H  K  I  L  I  K  H  G  I  Y  *  L  G  T  S  S  T  Y  L  N  T  *  L  F  I  H  K  F  S  F  N  H  S  K  Y  L  F  Y  F  K  C  P  S  K  K  N  S  I  I  T  Q  F  F  F  N  D  *  Q  I  L  K  S  S  I  F  S  H  T  I  M  A  *  N  Y  I  F  I  K  Y  F  I  G  E  N  *  I  S  S  F  L  D  L  L  S  *  I  *  I  P  E  I  K  T  N  I  A  I  Y  *  K  N  L  R  S  M  K  L  N  K  L  A  H  I  *  N  I  S  S  G  K  K  N  C  T  P  N  K  R  L  N  L  I  I  F  T  N  V  T  K  F  N  N  E  S  L  I  N  I  *  S  *  T  E  S  V  H  F  R  K  T  K  R  T  K  S  D  L  F  *  Q  I  *  G  S  K  L  I  Q  S  Y  I  R  D  Y  F  E  S  T  I  K  M  I  R  N  H  F  F  V  F  S  F  S  L  L  S  F  F  E  F  S  S  H  M  L  </first_frame>
            <second_frame>  I  S  N  Y  L  C  Y  I  *  Y  L  F  K  S  *  L  F  I  L  N  S  A  L  T  L  F  K  K  F  L  K  F  S  F  E  A  T  R  I  E  A  V  S  N  F  H  I  K  D  Q  K  I  V  L  V  *  V  S  I  T  S  I  V  C  C  F  H  Y  I  Q  I  A  F  N  D  *  Q  I  L  E  S  S  L  S  H  R  I  T  F  F  Q  *  I  H  V  R  A  A  Q  *  V  L  F  N  I  I  *  I  I  E  *  S  M  I  I  L  *  S  I  *  Y  F  L  N  H  T  T  C  N  L  L  *  I  F  F  T  C  E  I  K  F  H  K  V  *  I  *  Q  F  S  Q  I  *  L  N  *  T  I  K  V  *  *  I  S  Y  R  N  Q  K  C  S  L  L  K  N  I  K  D  Q  K  R  S  L  L  T  I  L  R  T  K  I  A  L  I  I  H  K  G  V  Y  *  N  Y  *  K  D  K  E  A  F  L  S  F  L  Y  N  F  L  *  I  F  F  I  H  A  K  Q  N  Y  T  M  F  N  Y  I  Y  T  I  *  R  T  K  S  N  *  F  *  K  V  L  R  T  K  I  T  *  Q  N  T  Q  E  T  I  L  N  L  L  S  K  I  R  D  H  F  Y  H  F  L  Y  *  *  F  P  L  N  F  L  H  T  Y  L  A  K  F  H  N  F  Y  L  *  I  H  Y  L  S  H  V  Y  N  H  N  N  L  D  L  F  S  L  H  *  T  *  R  K  M  G  L  F  N  I  S  L  L  L  T  C  L  M  V  L  A  I  F  H  S  C  E  A  Q  N  S  P  Q  D  Y  L  A  V  H  N  D  A  R  A  Q  V  G  V  G  P  M  S  W  D  A  N  L  A  S  R  A  Q  N  Y  A  N  S  R  A  G  D  C  N  L  I  H  S  G  A  G  E  N  L  A  K  G  G  G  D  F  T  G  R  A  A  V  Q  L  W  V  S  E  R  P  S  Y  N  Y  A  T  N  Q  C  V  G  G  K  K  C  R  H  Y  T  Q  V  V  W  R  N  S  V  R  L  G  C  G  R  A  R  C  N  N  G  W  W  F  I  S  C  N  Y  D  P  V  G  N  W  I  G  Q  R  P  Y  *  N  D  V  Y  L  *  H  V  A  S  I  K  *  N  S  H  M  R  R  R  E  V  K  I  *  V  *  H  M  N  Q  V  K  L  L  S  K  I  L  R  D  *  I  L  N  I  Y  N  Y  Y  Y  F  P  F  D  V  A  N  M  N  N  S  T  Y  H  M  F  I  M  G  L  S  *  L  L  S  T  A  S  S  C  F  H  K  T  L  I  Y  I  K  F  *  L  S  M  A  Y  I  N  *  A  H  Q  A  L  I  *  T  R  N  Y  L  F  I  N  S  V  S  T  I  Q  N  I  C  S  I  L  S  A  H  Q  K  K  I  Q  S  L  P  N  F  F  S  M  T  N  K  Y  S  S  L  P  Y  S  L  I  Q  *  W  P  K  T  I  F  S  *  N  I  L  *  V  K  I  E  F  H  P  F  L  T  Y  C  L  R  F  E  Y  Q  K  *  K  Q  I  L  L  F  I  E  K  I  Y  V  A  *  N  *  I  N  W  H  I  F  K  I  S  R  Q  E  K  K  I  V  P  L  T  N  V  *  I  *  *  F  S  Q  M  L  L  N  L  T  M  R  V  *  *  I  S  N  R  E  Q  K  V  F  T  F  E  K  Q  R  G  P  K  V  I  Y  F  D  K  F  K  D  Q  N  *  S  N  H  T  L  G  T  I  L  N  L  L  *  K  *  *  G  T  I  F  L  F  F  H  F  L  Y  *  V  S  L  N  F  L  H  T  C  * </second_frame>
            <third_frame>   Y  Q  T  I  Y  A  I  F  N  T  Y  L  N  R  N  Y  L  F  *  I  Q  L  *  H  F  L  K  S  F  *  N  F  L  S  K  L  Q  G  L  R  Q  F  L  I  S  T  *  R  T  K  K  L  F  W  F  K  C  L  S  L  P  L  F  V  V  F  I  I  S  K  L  L  S  M  T  N  K  Y  L  S  L  L  S  L  I  E  *  L  S  S  N  K  S  T  *  G  R  L  N  K  C  C  L  I  L  S  K  *  *  S  K  V  *  L  F  F  K  A  Y  S  I  S  L  I  T  R  H  A  I  S  F  E  F  S  S  H  V  K  *  N  S  T  K  F  K  F  N  N  F  H  K  F  D  *  I  E  Q  S  K  F  D  K  Y  L  I  E  T  K  S  V  H  F  *  K  I  *  R  T  K  K  D  H  F  *  Q  S  *  G  P  K  L  L  L  S  Y  I  R  E  S  I  E  T  T  K  K  I  R  K  P  F  C  H  F  S  I  I  S  F  E  F  S  S  Y  M  L  N  K  I  T  Q  C  L  I  I  Y  T  L  F  K  G  P  K  V  I  N  S  K  K  F  *  G  P  K  S  L  S  K  I  H  K  R  L  F  *  T  Y  Y  Q  R  *  E  T  I  F  I  I  S  S  T  N  N  F  L  *  I  F  F  T  H  T  *  Q  N  S  T  I  F  T  Y  K  Y  T  T  Y  L  T  F  I  I  T  I  T  *  I  Y  F  L  S  T  K  P  K  E  K  W  G  C  S  T  S  H  C  Y  S  L  V  S  W  Y  *  P  Y  F  T  L  V  R  P  K  I  H  P  K  T  I  L  R  F  I  T  M  P  V  P  K  S  E  S  G  L  C  L  G  M  P  T  W  H  P  E  H  K  T  M  P  T  Q  E  L  V  I  V  T  *  F  I  L  V  L  G  R  I  L  P  R  V  V  V  T  S  R  G  G  Q  P  C  N  C  G  C  P  R  G  Q  A  I  T  T  L  P  T  N  V  L  V  E  K  S  V  D  I  I  L  K  *  S  G  A  T  Q  S  D  *  V  V  V  G  H  V  A  T  T  D  G  G  S  F  L  A  T  M  I  L  *  A  T  G  S  D  N  V  L  T  K  M  M  Y  T  Y  D  M  L  L  V  L  N  K  I  L  I  *  D  V  E  K  L  K  F  K  F  D  I  *  I  K  S  N  S  Y  L  K  Y  *  G  I  K  Y  *  T  S  I  I  I  I  I  S  L  L  M  L  L  I  *  I  I  P  H  T  I  C  S  *  W  A  *  V  D  Y  *  V  L  H  L  L  V  S  I  K  H  *  Y  T  *  N  F  N  *  A  W  H  I  L  I  R  H  I  K  H  L  S  K  H  V  T  I  Y  S  *  I  Q  F  Q  P  F  K  I  F  V  L  F  *  V  P  I  K  K  K  F  N  H  Y  P  I  F  F  Q  *  L  T  N  T  Q  V  F  H  I  L  S  Y  N  N  G  L  K  L  Y  F  H  K  I  F  Y  R  *  K  L  N  F  I  L  S  *  P  I  V  L  D  L  N  T  R  N  K  N  K  Y  C  Y  L  L  K  K  F  T  *  H  E  I  K  *  I  G  T  Y  L  K  Y  L  V  R  K  K  K  L  Y  P  *  Q  T  F  K  F  N  N  F  H  K  C  Y  *  I  *  Q  *  E  F  D  K  Y  L  I  V  N  R  K  C  S  L  S  K  N  K  E  D  Q  K  *  S  I  L  T  N  L  R  I  K  I  D  P  I  I  H  *  G  L  F  *  I  Y  Y  K  N  D  K  E  P  F  F  C  F  F  I  F  S  I  K  F  L  *  I  F  F  T  H  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0157E03.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="66956" stop="66471"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>483</number_coding_nucleotides>
                  <number_encoded_amino_acids>161</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RKMGLFNISLLLTCLMVLAIFHSCEAQNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGAGENLAKGGGDFTGRAAVQLWVSERPSYNYATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNGWWFISCNYDPVGNWIGQRPY*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0157E03.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67191" stop="66997"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LILKSFKDQNHLAKYTRDYFELTIKDKRPFLSFPLLIISFEFSSHILSKIPQFLLINTLLISRL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="72071" PGL_stop="72569"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="72071" e_stop="72569"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="72071" e_stop="72569" e_length="499"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72071" stop="72569"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U340682" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATTTTTATTTTTTGTTATCCATTCCCTGTTTGATCCCTCTGATGAAGGAACAAACTCTGTCACCATCAATCTTTAATGGGTTTTCACAGCTAAGCTTGTAGTTGAAATTTGATACAATAATATTTATGTTTAAGGTCCACCAAGAAACCAGGTTCAAGGTATGCAAAGAACACCCACTGTCACCATATTCTCTGAACTCCAAATAAAAACTATTGTTTTCTTGTTTTTGGGGACAAAAGTTTAGCCCATACCCTTTTGGTTTTTTTTACTTCCATTTGCAGGTTTGTTACATATTAATGGTGTCTTGGTCTTGTTATGCTTGTGGGGTTGTGGGTTTTGAATATAAGCAAAAAAAAAAACTGGATTTGAGGTTGGGGTTAGGGGTTTTGATGAATGTATTGTTTGCTGGTTCTTTTGGATAAATTATGTAAAAAGATTCAAACTTTATCAAGATTCTTGGATAAATATATGTTTATGTGATATATATATATAGATATA</gDNA_template>
            <first_frame> N  F  Y  F  L  L  S  I  P  C  L  I  P  L  M  K  E  Q  T  L  S  P  S  I  F  N  G  F  S  Q  L  S  L  *  L  K  F  D  T  I  I  F  M  F  K  V  H  Q  E  T  R  F  K  V  C  K  E  H  P  L  S  P  Y  S  L  N  S  K  *  K  L  L  F  S  C  F  W  G  Q  K  F  S  P  Y  P  F  G  F  F  Y  F  H  L  Q  V  C  Y  I  L  M  V  S  W  S  C  Y  A  C  G  V  V  G  F  E  Y  K  Q  K  K  K  L  D  L  R  L  G  L  G  V  L  M  N  V  L  F  A  G  S  F  G  *  I  M  *  K  D  S  N  F  I  K  I  L  G  *  I  Y  V  Y  V  I  Y  I  Y  R  Y  </first_frame>
            <second_frame>  I  F  I  F  C  Y  P  F  P  V  *  S  L  *  *  R  N  K  L  C  H  H  Q  S  L  M  G  F  H  S  *  A  C  S  *  N  L  I  Q  *  Y  L  C  L  R  S  T  K  K  P  G  S  R  Y  A  K  N  T  H  C  H  H  I  L  *  T  P  N  K  N  Y  C  F  L  V  F  G  D  K  S  L  A  H  T  L  L  V  F  F  T  S  I  C  R  F  V  T  Y  *  W  C  L  G  L  V  M  L  V  G  L  W  V  L  N  I  S  K  K  K  N  W  I  *  G  W  G  *  G  F  *  *  M  Y  C  L  L  V  L  L  D  K  L  C  K  K  I  Q  T  L  S  R  F  L  D  K  Y  M  F  M  *  Y  I  Y  I  D  I </second_frame>
            <third_frame>   F  L  F  F  V  I  H  S  L  F  D  P  S  D  E  G  T  N  S  V  T  I  N  L  *  W  V  F  T  A  K  L  V  V  E  I  *  Y  N  N  I  Y  V  *  G  P  P  R  N  Q  V  Q  G  M  Q  R  T  P  T  V  T  I  F  S  E  L  Q  I  K  T  I  V  F  L  F  L  G  T  K  V  *  P  I  P  F  W  F  F  L  L  P  F  A  G  L  L  H  I  N  G  V  L  V  L  L  C  L  W  G  C  G  F  *  I  *  A  K  K  K  T  G  F  E  V  G  V  R  G  F  D  E  C  I  V  C  W  F  F  W  I  N  Y  V  K  R  F  K  L  Y  Q  D  S  W  I  N  I  C  L  C  D  I  Y  I  *  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0157E03.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="72278" stop="72493"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KLLFSCFWGQKFSPYPFGFFYFHLQVCYILMVSWSCYACGVVGFEYKQKKKLDLRLGLGVLMNVLFAGSFG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="72699" PGL_stop="74572"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="72699" e_stop="72903"/>
            <exon e_start="73834" e_stop="74201"/>
            <exon e_start="74543" e_stop="74572"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.989" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="72699" e_stop="72903" e_length="205"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.996">
            <gDNA_intron_boundary i_start="72904" i_stop="73833" i_length="930"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="73834" e_stop="74201" e_length="368"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.989">
            <gDNA_intron_boundary i_start="74202" i_stop="74542" i_length="341"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="74543" e_stop="74572" e_length="30"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72699" stop="72903"/>
              <exon start="73834" stop="74201"/>
              <exon start="74543" stop="74572"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U322464" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GATTTGGGGGTTCATGTAAATGGTGAATTTTCAATGGCAATAATACAAGCTAATAATTTAATGGAGGATCAGAGCCAGCTTGAATCAGGGCCATTGAGTTGTCTTGAATCAGGTCCTTATGGAACATTTGTTGGAGTTTATGATGGACATGGAGGACCGGAGACGTCCTGTTTCGTAAACAAGACTTTGTTCTCCAATCTTAAGA : AATTTGCAACGGAGCATCAAGAAATGTCTGCAGATGTCATAAAAAAAGCTTTCTTGAAAACGGATGAGGAGTTCTTGTCACTTGTGAAGCAACAATGGTTTGAGAAGCCACAACTTGCATCTGTGGGATCTTGTTGTTTGGCAGGCGTAATCTGCAATGGACTACTATATGTTGCCAATGCCGGAGATTCACGTGTGGTGTTAGGTAGAGCAGAGAAAGCTGCAAGGGGTGTGACTGCTATTCAATTGTCAATGGAGCACAATGCTAATAATGAGTCTGTGAGAGATGAGCTTAGATCATTGCATCCCCAGGATTCACAGATTGTGCTTCTCAAACACAAAGTTTGGCGCGTGAAGGGTATCATACAG : GTTTCGAGGTCAATTGGTGATGCCTATCTT</gDNA_template>
            <first_frame> D  L  G  V  H  V  N  G  E  F  S  M  A  I  I  Q  A  N  N  L  M  E  D  Q  S  Q  L  E  S  G  P  L  S  C  L  E  S  G  P  Y  G  T  F  V  G  V  Y  D  G  H  G  G  P  E  T  S  C  F  V  N  K  T  L  F  S  N  L  K   : K  F  A  T  E  H  Q  E  M  S  A  D  V  I  K  K  A  F  L  K  T  D  E  E  F  L  S  L  V  K  Q  Q  W  F  E  K  P  Q  L  A  S  V  G  S  C  C  L  A  G  V  I  C  N  G  L  L  Y  V  A  N  A  G  D  S  R  V  V  L  G  R  A  E  K  A  A  R  G  V  T  A  I  Q  L  S  M  E  H  N  A  N  N  E  S  V  R  D  E  L  R  S  L  H  P  Q  D  S  Q  I  V  L  L  K  H  K  V  W  R  V  K  G  I  I  Q  :  V  S  R  S  I  G  D  A  Y  L </first_frame>
            <second_frame>  I  W  G  F  M  *  M  V  N  F  Q  W  Q  *  Y  K  L  I  I  *  W  R  I  R  A  S  L  N  Q  G  H  *  V  V  L  N  Q  V  L  M  E  H  L  L  E  F  M  M  D  M  E  D  R  R  R  P  V  S  *  T  R  L  C  S  P  I  L  R  :  N  L  Q  R  S  I  K  K  C  L  Q  M  S  *  K  K  L  S  *  K  R  M  R  S  S  C  H  L  *  S  N  N  G  L  R  S  H  N  L  H  L  W  D  L  V  V  W  Q  A  *  S  A  M  D  Y  Y  M  L  P  M  P  E  I  H  V  W  C  *  V  E  Q  R  K  L  Q  G  V  *  L  L  F  N  C  Q  W  S  T  M  L  I  M  S  L  *  E  M  S  L  D  H  C  I  P  R  I  H  R  L  C  F  S  N  T  K  F  G  A  *  R  V  S  Y  R :   F  R  G  Q  L  V  M  P  I   </second_frame>
            <third_frame>   F  G  G  S  C  K  W  *  I  F  N  G  N  N  T  S  *  *  F  N  G  G  S  E  P  A  *  I  R  A  I  E  L  S  *  I  R  S  L  W  N  I  C  W  S  L  *  W  T  W  R  T  G  D  V  L  F  R  K  Q  D  F  V  L  Q  S  *  E :   I  C  N  G  A  S  R  N  V  C  R  C  H  K  K  S  F  L  E  N  G  *  G  V  L  V  T  C  E  A  T  M  V  *  E  A  T  T  C  I  C  G  I  L  L  F  G  R  R  N  L  Q  W  T  T  I  C  C  Q  C  R  R  F  T  C  G  V  R  *  S  R  E  S  C  K  G  C  D  C  Y  S  I  V  N  G  A  Q  C  *  *  *  V  C  E  R  *  A  *  I  I  A  S  P  G  F  T  D  C  A  S  Q  T  Q  S  L  A  R  E  G  Y  H  T   : G  F  E  V  N  W  *  C  L  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0157E03.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="72699" stop="72903"/>
                    <exon start="73834" stop="74201"/>
                    <exon start="74543" stop="74572"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>603</number_coding_nucleotides>
                  <number_encoded_amino_acids>201</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DLGVHVNGEFSMAIIQANNLMEDQSQLESGPLSCLESGPYGTFVGVYDGHGGPETSCFVNKTLFSNLKKFATEHQEMSADVIKKAFLKTDEEFLSLVKQQWFEKPQLASVGSCCLAGVICNGLLYVANAGDSRVVLGRAEKAARGVTAIQLSMEHNANNESVRDELRSLHPQDSQIVLLKHKVWRVKGIIQVSRSIGDAYL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="73390" e_stop="74080"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="73390" e_stop="74080" e_length="691"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73390" stop="74080"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U322463" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTGAATTACACGAAAGATCTTACAATCTTGTTGTCTATTTTACATGTTCGTTAAAACTTTTAAGATATAAAGATCTGGTTTTGTCACTTCTATGAGTTATGTAAACACAACTTTCATCAGATTTAAACGTATTTTCCTCTTTTATTAGAAATATTAGAACGACTTAAGATTTTGATACGTGCAATAACAATCCAGTAGAGACACACTCGAGGAAGATGCTATCTATAGATATCATATGCTTTTTGCAGTATCGTGATCTGAATTCCTAACACTGTTGTGCTTTCAACCTTACTACTATGTGTGTTATTCACCCTGAAACTGTCTAATTATCCTCCAAAAATGTTTATAATTATTCCTTGGAACTTATATTCATCTGTTTTATATTCTAGAAAGTTTATGAGTAGTATAAACGATATCTATTTACCTTCATCCCTTCATAAACAGAATTTGCAACGGAGCATCAAGAAATGTCTGCAGATGTCATAAAAAAAGCTTTCTTGAAAACGGATGAGGAGTTCTTGTCACTTGTGAAGCAACAATGGTTTGAGAAGCCACAACTTGCATCTGTGGGATCTTGTTGTTTGGCAGGCGTAATCTGCAATGGACTACTATATGTTGCCAATGCCGGAGATTCACGTGTGGTGTTAGGTAGAGCAGAGAAAGCTGCAAGGGGTGTGACTGCTATTCAATT</gDNA_template>
            <first_frame> L  N  Y  T  K  D  L  T  I  L  L  S  I  L  H  V  R  *  N  F  *  D  I  K  I  W  F  C  H  F  Y  E  L  C  K  H  N  F  H  Q  I  *  T  Y  F  P  L  L  L  E  I  L  E  R  L  K  I  L  I  R  A  I  T  I  Q  *  R  H  T  R  G  R  C  Y  L  *  I  S  Y  A  F  C  S  I  V  I  *  I  P  N  T  V  V  L  S  T  L  L  L  C  V  L  F  T  L  K  L  S  N  Y  P  P  K  M  F  I  I  I  P  W  N  L  Y  S  S  V  L  Y  S  R  K  F  M  S  S  I  N  D  I  Y  L  P  S  S  L  H  K  Q  N  L  Q  R  S  I  K  K  C  L  Q  M  S  *  K  K  L  S  *  K  R  M  R  S  S  C  H  L  *  S  N  N  G  L  R  S  H  N  L  H  L  W  D  L  V  V  W  Q  A  *  S  A  M  D  Y  Y  M  L  P  M  P  E  I  H  V  W  C  *  V  E  Q  R  K  L  Q  G  V  *  L  L  F  N  </first_frame>
            <second_frame>  *  I  T  R  K  I  L  Q  S  C  C  L  F  Y  M  F  V  K  T  F  K  I  *  R  S  G  F  V  T  S  M  S  Y  V  N  T  T  F  I  R  F  K  R  I  F  L  F  Y  *  K  Y  *  N  D  L  R  F  *  Y  V  Q  *  Q  S  S  R  D  T  L  E  E  D  A  I  Y  R  Y  H  M  L  F  A  V  S  *  S  E  F  L  T  L  L  C  F  Q  P  Y  Y  Y  V  C  Y  S  P  *  N  C  L  I  I  L  Q  K  C  L  *  L  F  L  G  T  Y  I  H  L  F  Y  I  L  E  S  L  *  V  V  *  T  I  S  I  Y  L  H  P  F  I  N  R  I  C  N  G  A  S  R  N  V  C  R  C  H  K  K  S  F  L  E  N  G  *  G  V  L  V  T  C  E  A  T  M  V  *  E  A  T  T  C  I  C  G  I  L  L  F  G  R  R  N  L  Q  W  T  T  I  C  C  Q  C  R  R  F  T  C  G  V  R  *  S  R  E  S  C  K  G  C  D  C  Y  S  I </second_frame>
            <third_frame>   E  L  H  E  R  S  Y  N  L  V  V  Y  F  T  C  S  L  K  L  L  R  Y  K  D  L  V  L  S  L  L  *  V  M  *  T  Q  L  S  S  D  L  N  V  F  S  S  F  I  R  N  I  R  T  T  *  D  F  D  T  C  N  N  N  P  V  E  T  H  S  R  K  M  L  S  I  D  I  I  C  F  L  Q  Y  R  D  L  N  S  *  H  C  C  A  F  N  L  T  T  M  C  V  I  H  P  E  T  V  *  L  S  S  K  N  V  Y  N  Y  S  L  E  L  I  F  I  C  F  I  F  *  K  V  Y  E  *  Y  K  R  Y  L  F  T  F  I  P  S  *  T  E  F  A  T  E  H  Q  E  M  S  A  D  V  I  K  K  A  F  L  K  T  D  E  E  F  L  S  L  V  K  Q  Q  W  F  E  K  P  Q  L  A  S  V  G  S  C  C  L  A  G  V  I  C  N  G  L  L  Y  V  A  N  A  G  D  S  R  V  V  L  G  R  A  E  K  A  A  R  G  V  T  A  I  Q   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0157E03.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="73830" stop="74078"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>249</number_coding_nucleotides>
                  <number_encoded_amino_acids>83</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TEFATEHQEMSADVIKKAFLKTDEEFLSLVKQQWFEKPQLASVGSCCLAGVICNGLLYVANAGDSRVVLGRAEKAARGVTAIQ</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0157E03.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="73651" stop="73875"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IPNTVVLSTLLLCVLFTLKLSNYPPKMFIIIPWNLYSSVLYSRKFMSSINDIYLPSSLHKQNLQRSIKKCLQMS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="74749" PGL_stop="75822"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="74749" e_stop="74779"/>
            <exon e_start="75062" e_stop="75615"/>
            <exon e_start="75808" e_stop="75822"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="0.935"/>
          <exon-intron don_prob="0.566" acc_prob="0.330" e_score="0.973"/>
          <exon-only e_score="0.800"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.935">
            <gDNA_exon_boundary e_start="74749" e_stop="74779" e_length="31"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="74780" i_stop="75061" i_length="282"/>
          </intron>
          <exon e_serial="2" e_score="0.973">
            <gDNA_exon_boundary e_start="75062" e_stop="75615" e_length="554"/>
          </exon>
          <intron i_serial="2" don_prob="0.566" acc_prob="0.330">
            <gDNA_intron_boundary i_start="75616" i_stop="75807" i_length="192"/>
          </intron>
          <exon e_serial="3" e_score="0.800">
            <gDNA_exon_boundary e_start="75808" e_stop="75822" e_length="15"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74749" stop="74779"/>
              <exon start="75062" stop="75615"/>
              <exon start="75808" stop="75822"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U321775" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGTTGATATAGTCCACAGTCAACCTCGAAAC : GGTATTGCCCAGAGATTAATCAAAGCTGCTCTCCGAGTAGCAGCTAAGAAAAGAGAGATGAGGTATTCAGACCTGAAAAAGATCGAACGAGGTGTAAGGAGGCATTTCCACGATGATATCTCGGTTGTTGTTGTGTTTCTGGATTGTTATTCCATGAATCGAAGCTCCTCTCACGTTCCGATACTTTCCATTAGAGGAGGCGGTATGCCTGCTTCTCCCAAACGATAGATCCCAAGACTTTAAACAGAGAAGAAAGAGAGCTCGTCTTTTGGAGGCCTCGAATCTCTTTGCTTCTTTTCTCCAGTTTCTTTAGGGTTGTAATCTACTTTTTATGTGTTCTTATATTTCCTCGATTATCAATTCATCATTCCTTGCTGAACAACGTAACGTGCACAACAGTCTCGTGTTACCAGGCAACGTATAAAGATGTACACGAGATACTTTGTGAGAACAGCAAAAGAAATGGAACAACCATTAGAAGGAAGAAGAATACCTACCTAAGTTATGTTCTGCAGGTTACAAATTTGTAAATACTAAAAACTGTTGTGTGACAA : AAAACAAACAAAAAC</gDNA_template>
            <first_frame> C  *  Y  S  P  Q  S  T  S  K   : R  Y  C  P  E  I  N  Q  S  C  S  P  S  S  S  *  E  K  R  D  E  V  F  R  P  E  K  D  R  T  R  C  K  E  A  F  P  R  *  Y  L  G  C  C  C  V  S  G  L  L  F  H  E  S  K  L  L  S  R  S  D  T  F  H  *  R  R  R  Y  A  C  F  S  Q  T  I  D  P  K  T  L  N  R  E  E  R  E  L  V  F  W  R  P  R  I  S  L  L  L  F  S  S  F  F  R  V  V  I  Y  F  L  C  V  L  I  F  P  R  L  S  I  H  H  S  L  L  N  N  V  T  C  T  T  V  S  C  Y  Q  A  T  Y  K  D  V  H  E  I  L  C  E  N  S  K  R  N  G  T  T  I  R  R  K  K  N  T  Y  L  S  Y  V  L  Q  V  T  N  L  *  I  L  K  T  V  V  *  Q  :  K  T  N  K  N </first_frame>
            <second_frame>  V  D  I  V  H  S  Q  P  R  N  :  G  I  A  Q  R  L  I  K  A  A  L  R  V  A  A  K  K  R  E  M  R  Y  S  D  L  K  K  I  E  R  G  V  R  R  H  F  H  D  D  I  S  V  V  V  V  F  L  D  C  Y  S  M  N  R  S  S  S  H  V  P  I  L  S  I  R  G  G  G  M  P  A  S  P  K  R  *  I  P  R  L  *  T  E  K  K  E  S  S  S  F  G  G  L  E  S  L  C  F  F  S  P  V  S  L  G  L  *  S  T  F  Y  V  F  L  Y  F  L  D  Y  Q  F  I  I  P  C  *  T  T  *  R  A  Q  Q  S  R  V  T  R  Q  R  I  K  M  Y  T  R  Y  F  V  R  T  A  K  E  M  E  Q  P  L  E  G  R  R  I  P  T  *  V  M  F  C  R  L  Q  I  C  K  Y  *  K  L  L  C  D  K :   K  Q  T  K   </second_frame>
            <third_frame>   L  I  *  S  T  V  N  L  E  T :   V  L  P  R  D  *  S  K  L  L  S  E  *  Q  L  R  K  E  R  *  G  I  Q  T  *  K  R  S  N  E  V  *  G  G  I  S  T  M  I  S  R  L  L  L  C  F  W  I  V  I  P  *  I  E  A  P  L  T  F  R  Y  F  P  L  E  E  A  V  C  L  L  L  P  N  D  R  S  Q  D  F  K  Q  R  R  K  R  A  R  L  L  E  A  S  N  L  F  A  S  F  L  Q  F  L  *  G  C  N  L  L  F  M  C  S  Y  I  S  S  I  I  N  S  S  F  L  A  E  Q  R  N  V  H  N  S  L  V  L  P  G  N  V  *  R  C  T  R  D  T  L  *  E  Q  Q  K  K  W  N  N  H  *  K  E  E  E  Y  L  P  K  L  C  S  A  G  Y  K  F  V  N  T  K  N  C  C  V  T   : K  N  K  Q  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0157E03.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75256" stop="75591"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>333</number_coding_nucleotides>
                  <number_encoded_amino_acids>111</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RRRYACFSQTIDPKTLNREERELVFWRPRISLLLFSSFFRVVIYFLCVLIFPRLSIHHSLLNNVTCTTVSCYQATYKDVHEILCENSKRNGTTIRRKKNTYLSYVLQVTNL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0157E03.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="74750" stop="74779"/>
                    <exon start="75062" stop="75289"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VDIVHSQPRNGIAQRLIKAALRVAAKKREMRYSDLKKIERGVRRHFHDDISVVVVFLDCYSMNRSSSHVPILSIRGGGMPASPKR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="-" PGL_start="79131" PGL_stop="76524"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="79131" e_stop="78806"/>
            <exon e_start="77723" e_stop="77646"/>
            <exon e_start="77563" e_stop="77438"/>
            <exon e_start="77333" e_stop="77273"/>
            <exon e_start="77106" e_stop="76524"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.977" acc_prob="0.994" e_score="0.979"/>
          <exon-intron don_prob="0.982" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.904" acc_prob="0.960" e_score="1.000"/>
          <exon-intron don_prob="0.922" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.979">
            <gDNA_exon_boundary e_start="79131" e_stop="78806" e_length="326"/>
          </exon>
          <intron i_serial="1" don_prob="0.977" acc_prob="0.994">
            <gDNA_intron_boundary i_start="78805" i_stop="77724" i_length="1082"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="77723" e_stop="77646" e_length="78"/>
          </exon>
          <intron i_serial="2" don_prob="0.982" acc_prob="0.982">
            <gDNA_intron_boundary i_start="77645" i_stop="77564" i_length="82"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="77563" e_stop="77438" e_length="126"/>
          </exon>
          <intron i_serial="3" don_prob="0.904" acc_prob="0.960">
            <gDNA_intron_boundary i_start="77437" i_stop="77334" i_length="104"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="77333" e_stop="77273" e_length="61"/>
          </exon>
          <intron i_serial="4" don_prob="0.922" acc_prob="1.000">
            <gDNA_intron_boundary i_start="77272" i_stop="77107" i_length="166"/>
          </intron>
          <exon e_serial="5" e_score="0.997">
            <gDNA_exon_boundary e_start="77106" e_stop="76524" e_length="583"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79131" stop="78806"/>
              <exon start="77723" stop="77646"/>
              <exon start="77563" stop="77438"/>
              <exon start="77333" stop="77273"/>
              <exon start="77106" stop="76899"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U320724" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76906" stop="76524"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U343283" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTGTTTCTTCTACGGAATTCTTTATCATGACTACGACGGCGGCGCAGCTTCCTGAAAACCCTATCAAAACCCTAGTTCAGTCACCGGATCCAAATCCGACCGCCGTTTCTGAAGCTCCGGCTCATGATTCCGCAACTGACTCATTGAAATCGCCAACGTCTGATGGAGTTAAGGACCAAGCGAAGTTGGATAAGGCGGCGGATGGAGGCGGCGGCGGCGGCGGTGGTAAGGATACTGATATACAGAAAAAGATGAAGCGAGCAGAGAGGTTTGGAATGACGGTTCAGCTTTCGGAAGAGGAGAAGCGAAACACTCGAGCTGAGAG : GTTTGGCACGTCTGCACCTCAGGGTTCAGATGCTTCAAAGAAAGCTGAAGAGCAGAAGAGGAAAGCTAGGGCTGAGAG : GTTTGGGCTTAGCCAATCTGATAGTACTGATGAGGATGCTAAGAAGAAAGCTAGGCTGGCAAGGTTCGCACCTCCTGCGAAGGCTGATCCTGTGGAGGAAGATAAAAGGAAAGCTAGGGCCCTCAG : GTTTTCACAGTCCAAGTCTGGTTCCCAATCACAAGAGAACGGCAAAGAAAAAACTGAGCAG : GAGACTGTTGCGGTGGAGAAGGCTGGAGGAGGAACATGAACCATTCTCAAACTTCGTTCAACAGCAAGAGTTACTTAAGATGTATAGTTTATTGTTGCTGCGGAATGGTTAGGAGTTCTGTTAAGAGTGACTTTAAATTCCCAAAGTTTTTGTTTTAGTCGTTTTTGGAGTTCCTTGTTTAGTTTGGTAGGTTAGAAGTCTTAACATTAGCAAGTTCCCTAGTAGCAGGTCCATCCTTCAAAATGGGGAAAATGGCTTTTGTCGTCTCTTAGGTTAGCCAGTAGTGCTGGGATACATGGACCACAACCTCCTTAGTGTGTTATTCTGTCAGAAGTGACGACCCATAACCAATATTTGAAATCAACTTCTTTTAAAAAAACTTATCTGAAACGATTAAACTACAACCTCAATATTTCCTACTTGAAACCTTTGTTTTTGACAACTTCATCATCGGGCTTTCCTTTATCAATCTGCAACTGTTCTTTCTCATTCTTGTGGTTTTTCATTTCACCTAAATGAGAAAATGGTGCATATCAAGGATCTACTGGTGATAGCATTTCTGATTTCTCCAAGTGCTCAATGT</gDNA_template>
            <first_frame> I  V  S  S  T  E  F  F  I  M  T  T  T  A  A  Q  L  P  E  N  P  I  K  T  L  V  Q  S  P  D  P  N  P  T  A  V  S  E  A  P  A  H  D  S  A  T  D  S  L  K  S  P  T  S  D  G  V  K  D  Q  A  K  L  D  K  A  A  D  G  G  G  G  G  G  G  G  K  D  T  D  I  Q  K  K  M  K  R  A  E  R  F  G  M  T  V  Q  L  S  E  E  E  K  R  N  T  R  A  E  R :   F  G  T  S  A  P  Q  G  S  D  A  S  K  K  A  E  E  Q  K  R  K  A  R  A  E  R :   F  G  L  S  Q  S  D  S  T  D  E  D  A  K  K  K  A  R  L  A  R  F  A  P  P  A  K  A  D  P  V  E  E  D  K  R  K  A  R  A  L  R :   F  S  Q  S  K  S  G  S  Q  S  Q  E  N  G  K  E  K  T  E  Q  :  E  T  V  A  V  E  K  A  G  G  G  T  *  T  I  L  K  L  R  S  T  A  R  V  T  *  D  V  *  F  I  V  A  A  E  W  L  G  V  L  L  R  V  T  L  N  S  Q  S  F  C  F  S  R  F  W  S  S  L  F  S  L  V  G  *  K  S  *  H  *  Q  V  P  *  *  Q  V  H  P  S  K  W  G  K  W  L  L  S  S  L  R  L  A  S  S  A  G  I  H  G  P  Q  P  P  *  C  V  I  L  S  E  V  T  T  H  N  Q  Y  L  K  S  T  S  F  K  K  T  Y  L  K  R  L  N  Y  N  L  N  I  S  Y  L  K  P  L  F  L  T  T  S  S  S  G  F  P  L  S  I  C  N  C  S  F  S  F  L  W  F  F  I  S  P  K  *  E  N  G  A  Y  Q  G  S  T  G  D  S  I  S  D  F  S  K  C  S  M  </first_frame>
            <second_frame>  L  F  L  L  R  N  S  L  S  *  L  R  R  R  R  S  F  L  K  T  L  S  K  P  *  F  S  H  R  I  Q  I  R  P  P  F  L  K  L  R  L  M  I  P  Q  L  T  H  *  N  R  Q  R  L  M  E  L  R  T  K  R  S  W  I  R  R  R  M  E  A  A  A  A  A  V  V  R  I  L  I  Y  R  K  R  *  S  E  Q  R  G  L  E  *  R  F  S  F  R  K  R  R  S  E  T  L  E  L  R   : G  L  A  R  L  H  L  R  V  Q  M  L  Q  R  K  L  K  S  R  R  G  K  L  G  L  R   : G  L  G  L  A  N  L  I  V  L  M  R  M  L  R  R  K  L  G  W  Q  G  S  H  L  L  R  R  L  I  L  W  R  K  I  K  G  K  L  G  P  S   : G  F  H  S  P  S  L  V  P  N  H  K  R  T  A  K  K  K  L  S  R :   R  L  L  R  W  R  R  L  E  E  E  H  E  P  F  S  N  F  V  Q  Q  Q  E  L  L  K  M  Y  S  L  L  L  L  R  N  G  *  E  F  C  *  E  *  L  *  I  P  K  V  F  V  L  V  V  F  G  V  P  C  L  V  W  *  V  R  S  L  N  I  S  K  F  P  S  S  R  S  I  L  Q  N  G  E  N  G  F  C  R  L  L  G  *  P  V  V  L  G  Y  M  D  H  N  L  L  S  V  L  F  C  Q  K  *  R  P  I  T  N  I  *  N  Q  L  L  L  K  K  L  I  *  N  D  *  T  T  T  S  I  F  P  T  *  N  L  C  F  *  Q  L  H  H  R  A  F  L  Y  Q  S  A  T  V  L  S  H  S  C  G  F  S  F  H  L  N  E  K  M  V  H  I  K  D  L  L  V  I  A  F  L  I  S  P  S  A  Q  C </second_frame>
            <third_frame>   C  F  F  Y  G  I  L  Y  H  D  Y  D  G  G  A  A  S  *  K  P  Y  Q  N  P  S  S  V  T  G  S  K  S  D  R  R  F  *  S  S  G  S  *  F  R  N  *  L  I  E  I  A  N  V  *  W  S  *  G  P  S  E  V  G  *  G  G  G  W  R  R  R  R  R  R  W  *  G  Y  *  Y  T  E  K  D  E  A  S  R  E  V  W  N  D  G  S  A  F  G  R  G  E  A  K  H  S  S  *  E  :  V  W  H  V  C  T  S  G  F  R  C  F  K  E  S  *  R  A  E  E  E  S  *  G  *  E  :  V  W  A  *  P  I  *  *  Y  *  *  G  C  *  E  E  S  *  A  G  K  V  R  T  S  C  E  G  *  S  C  G  G  R  *  K  E  S  *  G  P  Q  :  V  F  T  V  Q  V  W  F  P  I  T  R  E  R  Q  R  K  N  *  A   : G  D  C  C  G  G  E  G  W  R  R  N  M  N  H  S  Q  T  S  F  N  S  K  S  Y  L  R  C  I  V  Y  C  C  C  G  M  V  R  S  S  V  K  S  D  F  K  F  P  K  F  L  F  *  S  F  L  E  F  L  V  *  F  G  R  L  E  V  L  T  L  A  S  S  L  V  A  G  P  S  F  K  M  G  K  M  A  F  V  V  S  *  V  S  Q  *  C  W  D  T  W  T  T  T  S  L  V  C  Y  S  V  R  S  D  D  P  *  P  I  F  E  I  N  F  F  *  K  N  L  S  E  T  I  K  L  Q  P  Q  Y  F  L  L  E  T  F  V  F  D  N  F  I  I  G  L  S  F  I  N  L  Q  L  F  F  L  I  L  V  V  F  H  F  T  *  M  R  K  W  C  I  S  R  I  Y  W  *  *  H  F  *  F  L  Q  V  L  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0157E03.1" strand="-"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79131" stop="78806"/>
                    <exon start="77723" stop="77646"/>
                    <exon start="77563" stop="77438"/>
                    <exon start="77333" stop="77273"/>
                    <exon start="77106" stop="77068"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>627</number_coding_nucleotides>
                  <number_encoded_amino_acids>209</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IVSSTEFFIMTTTAAQLPENPIKTLVQSPDPNPTAVSEAPAHDSATDSLKSPTSDGVKDQAKLDKAADGGGGGGGGKDTDIQKKMKRAERFGMTVQLSEEEKRNTRAERFGTSAPQGSDASKKAEEQKRKARAERFGLSQSDSTDEDAKKKARLARFAPPAKADPVEEDKRKARALRFSQSKSGSQSQENGKEKTEQETVAVEKAGGGT*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0157E03.1" strand="-"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="76791" stop="76588"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CVILSEVTTHNQYLKSTSFKKTYLKRLNYNLNISYLKPLFLTTSSSGFPLSICNCSFSFLWFFISPK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="+" PGL_start="89138" PGL_stop="89760"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="89138" e_stop="89760"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="89138" e_stop="89760" e_length="623"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89138" stop="89760"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U343666" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAGAGGAAGATAAAGCCTTGCAGCTTTGTCGTGAACGGAAGAAGTTTGTAAGGCAAGCTCTTGATGGACGGTGTAATCTAGCCGCGACTCATATAGCTTATATTGAGTCTCTGAAAATTACAGGAACTGTTTTAAGGAGATTTGCTGAACCTGAGGCTCCAATTGGATCTTCAATCTACACTTCAACGAGTGCAACCCCTGAGCTACGTGGATTAACTGAAAAGTCTCTTTCCCATTTTTCATTCTCTTCTCGATCCATCTCACGTCATGTAGATGCAACTGAGAATATCCTACCGTCTCCTTCATCTCCAACCTCAAGTCGATACCATGCTAATCACATGAAATTTAGAGGTACATTTTCTAGGAAAGTTGAAGAAAAACCTTCTGTTCCAGTTACTGTTTCAGTTACTTCAGCTACACCTCAGAACTCCACGCCTCGTTCCGCAGAGAGGCCTGAAGCATCACCTTTTGAAATCCCTCATGAAACTTCACCATTTGAAATCCCTCCTTCCCCTTCTGAAACTTCACCTTGGGACTACTTTGGTCTTGGCCATGATATTGATAATCATTTGACTTCACAAAATGGAAGGATTGAGAATGGAAATGACAATAGACATCATGGA</gDNA_template>
            <first_frame> *  R  K  I  K  P  C  S  F  V  V  N  G  R  S  L  *  G  K  L  L  M  D  G  V  I  *  P  R  L  I  *  L  I  L  S  L  *  K  L  Q  E  L  F  *  G  D  L  L  N  L  R  L  Q  L  D  L  Q  S  T  L  Q  R  V  Q  P  L  S  Y  V  D  *  L  K  S  L  F  P  I  F  H  S  L  L  D  P  S  H  V  M  *  M  Q  L  R  I  S  Y  R  L  L  H  L  Q  P  Q  V  D  T  M  L  I  T  *  N  L  E  V  H  F  L  G  K  L  K  K  N  L  L  F  Q  L  L  F  Q  L  L  Q  L  H  L  R  T  P  R  L  V  P  Q  R  G  L  K  H  H  L  L  K  S  L  M  K  L  H  H  L  K  S  L  L  P  L  L  K  L  H  L  G  T  T  L  V  L  A  M  I  L  I  I  I  *  L  H  K  M  E  G  L  R  M  E  M  T  I  D  I  M   </first_frame>
            <second_frame>  R  G  R  *  S  L  A  A  L  S  *  T  E  E  V  C  K  A  S  S  *  W  T  V  *  S  S  R  D  S  Y  S  L  Y  *  V  S  E  N  Y  R  N  C  F  K  E  I  C  *  T  *  G  S  N  W  I  F  N  L  H  F  N  E  C  N  P  *  A  T  W  I  N  *  K  V  S  F  P  F  F  I  L  F  S  I  H  L  T  S  C  R  C  N  *  E  Y  P  T  V  S  F  I  S  N  L  K  S  I  P  C  *  S  H  E  I  *  R  Y  I  F  *  E  S  *  R  K  T  F  C  S  S  Y  C  F  S  Y  F  S  Y  T  S  E  L  H  A  S  F  R  R  E  A  *  S  I  T  F  *  N  P  S  *  N  F  T  I  *  N  P  S  F  P  F  *  N  F  T  L  G  L  L  W  S  W  P  *  Y  *  *  S  F  D  F  T  K  W  K  D  *  E  W  K  *  Q  *  T  S  W  </second_frame>
            <third_frame>   E  E  D  K  A  L  Q  L  C  R  E  R  K  K  F  V  R  Q  A  L  D  G  R  C  N  L  A  A  T  H  I  A  Y  I  E  S  L  K  I  T  G  T  V  L  R  R  F  A  E  P  E  A  P  I  G  S  S  I  Y  T  S  T  S  A  T  P  E  L  R  G  L  T  E  K  S  L  S  H  F  S  F  S  S  R  S  I  S  R  H  V  D  A  T  E  N  I  L  P  S  P  S  S  P  T  S  S  R  Y  H  A  N  H  M  K  F  R  G  T  F  S  R  K  V  E  E  K  P  S  V  P  V  T  V  S  V  T  S  A  T  P  Q  N  S  T  P  R  S  A  E  R  P  E  A  S  P  F  E  I  P  H  E  T  S  P  F  E  I  P  P  S  P  S  E  T  S  P  W  D  Y  F  G  L  G  H  D  I  D  N  H  L  T  S  Q  N  G  R  I  E  N  G  N  D  N  R  H  H  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0157E03.1" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="89140" stop="89760"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>621</number_coding_nucleotides>
                  <number_encoded_amino_acids>207</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EEDKALQLCRERKKFVRQALDGRCNLAATHIAYIESLKITGTVLRRFAEPEAPIGSSIYTSTSATPELRGLTEKSLSHFSFSSRSISRHVDATENILPSPSSPTSSRYHANHMKFRGTFSRKVEEKPSVPVTVSVTSATPQNSTPRSAERPEASPFEIPHETSPFEIPPSPSETSPWDYFGLGHDIDNHLTSQNGRIENGNDNRHHG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 52 chains have been computed
$ 
$ memory statistics:
$ 57000 bytes spliced alignments in total
$ 23 spliced alignments have been stored
$ 2478 bytes was the average size of a spliced alignment
$ 25616 bytes predicted gene locations in total
$ 17 predicted gene locations have been stored
$ 1506 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 74 backtrace matrices have been allocated
$ 
$ date finished: 2009-02-02 15:48:32
-->
